HHsearch alignment for GI: 254780283 and conserved domain: PRK12771
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional.
Probab=100.00 E-value=0 Score=315.84 Aligned_cols=291 Identities=24% Similarity=0.344 Sum_probs=218.1
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECC-CCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 76751999989777999999999869959999678-87756875010078774777789789998664323200232221
Q gi|254780283|r 3 SHDSKILIIGSGPAGYTAAIYAARAMLKPVIIAGS-DLGGQLMITESIENYPGFATSIRGDWLMEQMRQQAENFGTKIIQ 81 (321)
Q Consensus 3 ~~~~dVvIIG~GpAGl~aA~~l~r~g~~v~iie~~-~~GG~l~~~~~i~n~~g~~~~~~~~~l~~~~~~~~~~~~v~~~~ 81 (321)
T Consensus 135 ~tgkkVAVIGaGPAGLsaA~~La~~G~~VtVfE~~~~~GGml~-----~GIP~yRL---P~~vl~~ei~~i~~~GV~~~~ 206 (560)
T PRK12771 135 DTGKRVAVIGGGPAGLSAAYQLRRLGHAVTIFEAGPKLGGMMR-----YGIPGYRL---PRDVLDAEIQRILDLGVEVKL 206 (560)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCEEE-----CCCCCCCC---CHHHHHHHHHHHHHCCCEEEE
T ss_conf 7899899989778999999999976985899676788898883-----56875447---589999999999964967983
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCC-CEEEEECCCCCCCEE-ECCCCCC--CCCCCCCCCCEEEEECCCC
Q ss_conf 13320112222222222222222100001477664-202465277433202-1012111--1111112210000102556
Q gi|254780283|r 82 DLVVSVDLDRHPFLVETQSGDLWHADAVVIATGSE-VKWLRLESEKKFQGF-GVSACAT--CDGFFYKNKDVIVVGGGNT 157 (321)
Q Consensus 82 ~~V~~i~~~~~~~~v~~~~g~~~~a~~lIiAtG~~-~~~~~ipG~~~~~~~-~v~~~~~--~d~~~~~~k~v~ViGgG~~ 157 (321)
T Consensus 207 n~~vg~di-----t~--~~L~-~~yDAV~la~Ga~~~r~l~i~G~d~~gV~~al~fL~~~~~g~~~~~Gk~VvVIGGGnt 278 (560)
T PRK12771 207 GVRVGEDI-----TL--EQLE-GDYDAVFVAIGAQLGKRLPIPGEDAANVLDAVSFLRAVEEGEPPKLGKRVVVIGGGNT 278 (560)
T ss_pred CCEECCCC-----CH--HHHH-CCCCEEEECCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCEEEEECCCCH
T ss_conf 87844656-----79--9971-7788899916878776089788776552405999999756897556886899899822
Q ss_pred CCCCEEEEECCC-CCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEC-------
Q ss_conf 543101210133-32223443433--22111121122355443322223112114864333444443331420-------
Q gi|254780283|r 158 AAEEALHLAKIA-RRVTIVHRRSS--LRSEKILQEKLFLQSNIDFLFDTEVVDVIGSIPEPPLFPSVSGVRLH------- 227 (321)
Q Consensus 158 g~e~A~~L~~~~-~~Vtli~r~~~--l~~~~~~~~~~~~~~~i~~~~~~~v~~i~g~~~~~~~~~~~~~v~~~------- 227 (321)
T Consensus 279 AmD~artA~RlGa~~V~ivyrr~~~~MpA~~~Ei~~A-~eEGV~~~~~~~p~~i~~~~g~------v~gl~~~~~~~~e~ 351 (560)
T PRK12771 279 AMDAARTARRLGAEEVVIVYRRTREEMPAHAFEIDDA-LREGVEINWLRTPVEVEKDEDG------VTGLRVEKMELDEK 351 (560)
T ss_pred HHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHH-HHCCCEEEECCCCEEEECCCCE------EEEEEEEEEEECCC
T ss_conf 8999999997389769998314420289998999878-7479568963464799806985------98999999998899
Q ss_pred --CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC-CCEECCCCEEEECCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf --3210000011222211123223565677425-6180699799008885547898289701268844567899997999
Q gi|254780283|r 228 --NKKEGNFFERNVDGIFIAIGYKPNTKIFRHQ-LKMTNTNYIWTMPDSTATSIPGIFAAGDVADERYRQAITAAAMGCM 304 (321)
Q Consensus 228 --~~~~g~~~~i~~D~vi~a~G~~pn~~~~~~~-~~~~~~g~i~~~~~~~~Ts~p~Iya~GDv~~~~~~~~~~A~~~G~~ 304 (321)
T Consensus 352 g~~~~~g~~~~i~aD~VI~AiGq~~d~~~l~~~~~~~~~~g~i~~~~~~~~Ts~~gVFa~GD~v~Gp-~~vv~AI~~Gr~ 430 (560)
T PRK12771 352 GEPGPTGEFFTLEADMVVLAIGQDTDSEFLEGLPGVRNGRGGLVVDRNFRMTGRPGVFAGGDMVPGE-RTVTTAVGHGKK 430 (560)
T ss_pred CCCCCCCCCEEEECCEEEECCCCCCCCCHHCCCCCEEECCCCEEECCCCCCCCCCCEEECCCCCCCC-HHHHHHHHHHHH
T ss_conf 8878899726754689999225788730002365547179988847876657998867436546684-189999999999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999997422
Q gi|254780283|r 305 AALEVEHYLSIHQ 317 (321)
Q Consensus 305 Aa~~i~~yl~~~~ 317 (321)
T Consensus 431 AA~~Id~yL~G~~ 443 (560)
T PRK12771 431 AARHIDAFLRGEH 443 (560)
T ss_pred HHHHHHHHHCCCC
T ss_conf 9999999966898