HHsearch alignment for GI: 254780283 and conserved domain: PRK12771

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional.
Probab=100.00  E-value=0  Score=315.84  Aligned_cols=291  Identities=24%  Similarity=0.344  Sum_probs=218.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECC-CCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             76751999989777999999999869959999678-87756875010078774777789789998664323200232221
Q gi|254780283|r    3 SHDSKILIIGSGPAGYTAAIYAARAMLKPVIIAGS-DLGGQLMITESIENYPGFATSIRGDWLMEQMRQQAENFGTKIIQ   81 (321)
Q Consensus         3 ~~~~dVvIIG~GpAGl~aA~~l~r~g~~v~iie~~-~~GG~l~~~~~i~n~~g~~~~~~~~~l~~~~~~~~~~~~v~~~~   81 (321)
T Consensus       135 ~tgkkVAVIGaGPAGLsaA~~La~~G~~VtVfE~~~~~GGml~-----~GIP~yRL---P~~vl~~ei~~i~~~GV~~~~  206 (560)
T PRK12771        135 DTGKRVAVIGGGPAGLSAAYQLRRLGHAVTIFEAGPKLGGMMR-----YGIPGYRL---PRDVLDAEIQRILDLGVEVKL  206 (560)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCEEE-----CCCCCCCC---CHHHHHHHHHHHHHCCCEEEE
T ss_conf             7899899989778999999999976985899676788898883-----56875447---589999999999964967983


Q ss_pred             EEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCC-CEEEEECCCCCCCEE-ECCCCCC--CCCCCCCCCCEEEEECCCC
Q ss_conf             13320112222222222222222100001477664-202465277433202-1012111--1111112210000102556
Q gi|254780283|r   82 DLVVSVDLDRHPFLVETQSGDLWHADAVVIATGSE-VKWLRLESEKKFQGF-GVSACAT--CDGFFYKNKDVIVVGGGNT  157 (321)
Q Consensus        82 ~~V~~i~~~~~~~~v~~~~g~~~~a~~lIiAtG~~-~~~~~ipG~~~~~~~-~v~~~~~--~d~~~~~~k~v~ViGgG~~  157 (321)
T Consensus       207 n~~vg~di-----t~--~~L~-~~yDAV~la~Ga~~~r~l~i~G~d~~gV~~al~fL~~~~~g~~~~~Gk~VvVIGGGnt  278 (560)
T PRK12771        207 GVRVGEDI-----TL--EQLE-GDYDAVFVAIGAQLGKRLPIPGEDAANVLDAVSFLRAVEEGEPPKLGKRVVVIGGGNT  278 (560)
T ss_pred             CCEECCCC-----CH--HHHH-CCCCEEEECCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCEEEEECCCCH
T ss_conf             87844656-----79--9971-7788899916878776089788776552405999999756897556886899899822


Q ss_pred             CCCCEEEEECCC-CCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEC-------
Q ss_conf             543101210133-32223443433--22111121122355443322223112114864333444443331420-------
Q gi|254780283|r  158 AAEEALHLAKIA-RRVTIVHRRSS--LRSEKILQEKLFLQSNIDFLFDTEVVDVIGSIPEPPLFPSVSGVRLH-------  227 (321)
Q Consensus       158 g~e~A~~L~~~~-~~Vtli~r~~~--l~~~~~~~~~~~~~~~i~~~~~~~v~~i~g~~~~~~~~~~~~~v~~~-------  227 (321)
T Consensus       279 AmD~artA~RlGa~~V~ivyrr~~~~MpA~~~Ei~~A-~eEGV~~~~~~~p~~i~~~~g~------v~gl~~~~~~~~e~  351 (560)
T PRK12771        279 AMDAARTARRLGAEEVVIVYRRTREEMPAHAFEIDDA-LREGVEINWLRTPVEVEKDEDG------VTGLRVEKMELDEK  351 (560)
T ss_pred             HHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHH-HHCCCEEEECCCCEEEECCCCE------EEEEEEEEEEECCC
T ss_conf             8999999997389769998314420289998999878-7479568963464799806985------98999999998899


Q ss_pred             --CCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC-CCEECCCCEEEECCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf             --3210000011222211123223565677425-6180699799008885547898289701268844567899997999
Q gi|254780283|r  228 --NKKEGNFFERNVDGIFIAIGYKPNTKIFRHQ-LKMTNTNYIWTMPDSTATSIPGIFAAGDVADERYRQAITAAAMGCM  304 (321)
Q Consensus       228 --~~~~g~~~~i~~D~vi~a~G~~pn~~~~~~~-~~~~~~g~i~~~~~~~~Ts~p~Iya~GDv~~~~~~~~~~A~~~G~~  304 (321)
T Consensus       352 g~~~~~g~~~~i~aD~VI~AiGq~~d~~~l~~~~~~~~~~g~i~~~~~~~~Ts~~gVFa~GD~v~Gp-~~vv~AI~~Gr~  430 (560)
T PRK12771        352 GEPGPTGEFFTLEADMVVLAIGQDTDSEFLEGLPGVRNGRGGLVVDRNFRMTGRPGVFAGGDMVPGE-RTVTTAVGHGKK  430 (560)
T ss_pred             CCCCCCCCCEEEECCEEEECCCCCCCCCHHCCCCCEEECCCCEEECCCCCCCCCCCEEECCCCCCCC-HHHHHHHHHHHH
T ss_conf             8878899726754689999225788730002365547179988847876657998867436546684-189999999999


Q ss_pred             HHHHHHHHHHHHH
Q ss_conf             9999999997422
Q gi|254780283|r  305 AALEVEHYLSIHQ  317 (321)
Q Consensus       305 Aa~~i~~yl~~~~  317 (321)
T Consensus       431 AA~~Id~yL~G~~  443 (560)
T PRK12771        431 AARHIDAFLRGEH  443 (560)
T ss_pred             HHHHHHHHHCCCC
T ss_conf             9999999966898