HHsearch alignment for GI: 254780283 and conserved domain: PRK12809
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed.
Probab=100.00 E-value=0 Score=322.03 Aligned_cols=297 Identities=22% Similarity=0.281 Sum_probs=217.2
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCC-CCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCE
Q ss_conf 67519999897779999999998699599996788-77568750100787747777897899986643232002322211
Q gi|254780283|r 4 HDSKILIIGSGPAGYTAAIYAARAMLKPVIIAGSD-LGGQLMITESIENYPGFATSIRGDWLMEQMRQQAENFGTKIIQD 82 (321)
Q Consensus 4 ~~~dVvIIG~GpAGl~aA~~l~r~g~~v~iie~~~-~GG~l~~~~~i~n~~g~~~~~~~~~l~~~~~~~~~~~~v~~~~~ 82 (321)
T Consensus 309 ~gkKVAVIGsGPAGLaaA~~Lar~G~~VTVfE~~~~~GGlL~-----yGIP~fRLP---K~vv~rei~~l~~lGV~f~~n 380 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLT-----FGIPPFKLD---KTVLSQRREIFTAMGIDFHLN 380 (639)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEE-----ECCCCCCCC---HHHHHHHHHHHHHCCCEEEEC
T ss_conf 899899989758999999999975990699936888898685-----358745277---789999999998649889919
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCEECCCCCC-CCEEEEECCCCCCCEEE-CCCCC----------CCCCC---CCCCC
Q ss_conf 332011222222222222222210000147766-42024652774332021-01211----------11111---11221
Q gi|254780283|r 83 LVVSVDLDRHPFLVETQSGDLWHADAVVIATGS-EVKWLRLESEKKFQGFG-VSACA----------TCDGF---FYKNK 147 (321)
Q Consensus 83 ~V~~i~~~~~~~~v~~~~g~~~~a~~lIiAtG~-~~~~~~ipG~~~~~~~~-v~~~~----------~~d~~---~~~~k 147 (321)
T Consensus 381 ~~VGkDit~-------~eL~-~~yDAVflg~Ga~~~~~l~IpGedl~GV~~AlefL~~~~~~~~g~~~~~~~p~~~~~GK 452 (639)
T PRK12809 381 CEIGRDITF-------SDLT-SEYDAVFIGVGTYGMMRADLPHEDAPGVIQALPFLTAHTRQLMGLPESEEYPLTDVEGK 452 (639)
T ss_pred CEECCCCCH-------HHHH-HHCCEEEEEECCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 677986889-------9997-31798999736788854898877787838769999999986438864445775455677
Q ss_pred CEEEEECCCCCCCCEEEEECC-CCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC-------
Q ss_conf 000010255654310121013-3322234434332--211112112235544332222311211486433344-------
Q gi|254780283|r 148 DVIVVGGGNTAAEEALHLAKI-ARRVTIVHRRSSL--RSEKILQEKLFLQSNIDFLFDTEVVDVIGSIPEPPL------- 217 (321)
Q Consensus 148 ~v~ViGgG~~g~e~A~~L~~~-~~~Vtli~r~~~l--~~~~~~~~~~~~~~~i~~~~~~~v~~i~g~~~~~~~------- 217 (321)
T Consensus 453 ~VVVIGGGntAmDcaRTA~RlGA~~VtivYRR~~~eMPA~~~Ev~~A-~EEGV~f~~~~~P~~i~~de~G~V~gv~~vr~ 531 (639)
T PRK12809 453 RVVVLGGGDTTMDCLRTSIRLNAASVTCAYRRDEVSMPGSRKEVVNA-REEGVEFQFNVQPQYIACDEDGRLTAVGLIRT 531 (639)
T ss_pred EEEEECCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEECCCH-HHCCEEEECCCCCEEEEECCCCEEEEEEEEEE
T ss_conf 79998998218999999998399877521547745799970030101-21873898278857999679863999999999
Q ss_pred ---CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCH-HHHH-CCCCEECCCCEEEECC---CCCCCCCCEEEECCCCC
Q ss_conf ---44433314203210000011222211123223565-6774-2561806997990088---85547898289701268
Q gi|254780283|r 218 ---FPSVSGVRLHNKKEGNFFERNVDGIFIAIGYKPNT-KIFR-HQLKMTNTNYIWTMPD---STATSIPGIFAAGDVAD 289 (321)
Q Consensus 218 ---~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~-~~~~-~~~~~~~~g~i~~~~~---~~~Ts~p~Iya~GDv~~ 289 (321)
T Consensus 532 ~lgepd~~GRr~p~~i~Gse~~i~aD~VI~AiG~~~~~~~~~~~~giel~~~G~I~~~~~~~~~~qTs~~gVFAgGD~v~ 611 (639)
T PRK12809 532 AMGEPGPDGRRRPRPVAGSEFELPADVLIMAFGFQAHAMPWLQGSGIKLDKWGLIQTGDVGYLPTQTHLKKVFAGGDAVH 611 (639)
T ss_pred EECCCCCCCCEEEEEECCCEEEEECCEEEECCCCCCCCCCCCCCCCEEECCCCCEECCCCCCCCCCCCCCCEEECCCCCC
T ss_conf 95675888887347608936999899999988789988753346785588999886178777676689999998278786
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 84456789999799999999999974220
Q gi|254780283|r 290 ERYRQAITAAAMGCMAALEVEHYLSIHQS 318 (321)
Q Consensus 290 ~~~~~~~~A~~~G~~Aa~~i~~yl~~~~~ 318 (321)
T Consensus 612 G-~stVV~AI~~Gr~AA~sI~~yl~~k~~ 639 (639)
T PRK12809 612 G-ADLVVTAMAAGRQAARDMLTLFDTKAS 639 (639)
T ss_pred C-CHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 7-369999999999999999999874039