HHsearch alignment for GI: 254780283 and conserved domain: PRK12814
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional.
Probab=100.00 E-value=0 Score=328.86 Aligned_cols=295 Identities=25% Similarity=0.333 Sum_probs=220.8
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECC-CCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCE
Q ss_conf 6751999989777999999999869959999678-877568750100787747777897899986643232002322211
Q gi|254780283|r 4 HDSKILIIGSGPAGYTAAIYAARAMLKPVIIAGS-DLGGQLMITESIENYPGFATSIRGDWLMEQMRQQAENFGTKIIQD 82 (321)
Q Consensus 4 ~~~dVvIIG~GpAGl~aA~~l~r~g~~v~iie~~-~~GG~l~~~~~i~n~~g~~~~~~~~~l~~~~~~~~~~~~v~~~~~ 82 (321)
T Consensus 192 tGKkVAIIGaGPAGLsaAy~L~~~Gh~VTVfE~~~~~GGmlr-----yGIP~yRLP---k~vld~EI~~i~~~GV~~~~n 263 (652)
T PRK12814 192 SGKKVAIIGAGPAGLTAAYYLLRKGHDVTIFDANEQAGGMMR-----YGIPRFRLP---ESVIDADIAPLRAMGAEFRFN 263 (652)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEE-----ECCCCCCCC---HHHHHHHHHHHHHCCCEEEEE
T ss_conf 899799968378999999999977990699815888898676-----448633389---999999999999719858866
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCC-CEEEEECCCCCCCEE-ECCCCCC--CCCCCCCCCCEEEEECCCCC
Q ss_conf 3320112222222222222222100001477664-202465277433202-1012111--11111122100001025565
Q gi|254780283|r 83 LVVSVDLDRHPFLVETQSGDLWHADAVVIATGSE-VKWLRLESEKKFQGF-GVSACAT--CDGFFYKNKDVIVVGGGNTA 158 (321)
Q Consensus 83 ~V~~i~~~~~~~~v~~~~g~~~~a~~lIiAtG~~-~~~~~ipG~~~~~~~-~v~~~~~--~d~~~~~~k~v~ViGgG~~g 158 (321)
T Consensus 264 ~~vG~ditl-------~~L~-~~yDAVflaiGa~~~r~L~ipGedl~gV~~avdfL~~v~~g~~~~~GkkVvVIGGGNtA 335 (652)
T PRK12814 264 TVFGRDITL-------EELQ-KEFDAVLLAVGAQKASKMGIPGEELPGVISGIDFLRNVALGTALHPGKKVVVIGGGNTA 335 (652)
T ss_pred EEECCCCCH-------HHHH-HHCCEEEEEECCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCEEECCCCHH
T ss_conf 794774779-------9998-65899999755787744798888787727689999985269866678852486688138
Q ss_pred CCCEEEEECCCC-CCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC--------CCCCCCEEEC
Q ss_conf 431012101333-2223443433--2211112112235544332222311211486433344--------4443331420
Q gi|254780283|r 159 AEEALHLAKIAR-RVTIVHRRSS--LRSEKILQEKLFLQSNIDFLFDTEVVDVIGSIPEPPL--------FPSVSGVRLH 227 (321)
Q Consensus 159 ~e~A~~L~~~~~-~Vtli~r~~~--l~~~~~~~~~~~~~~~i~~~~~~~v~~i~g~~~~~~~--------~~~~~~v~~~ 227 (321)
T Consensus 336 mD~ARTA~RlGA~~VtivyRRt~~eMpA~~~Ei~eA-~eEGV~~~~l~~P~~i~~~~g~~~~~~~~~~~ge~D~sGR~~p 414 (652)
T PRK12814 336 IDAARTALRLGAESVTILYRRTREEMPANRAEIEEA-LAEGVSLRELAAPVSIERSEGGLELTAIKMQQGEPDESGRRRP 414 (652)
T ss_pred HHHHHHHHHCCCCEEEEEECCCHHCCCCCHHHHHHH-HHCCCCEEECCCCEEEEEECCCEEEEEEEEEEEEECCCCCEEE
T ss_conf 999999987489758998337633199986777788-8679846976155899986896899999999968878897724
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHC-CCCEECCCCEEEECCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 321000001122221112322356567742-5618069979900888554789828970126884456789999799999
Q gi|254780283|r 228 NKKEGNFFERNVDGIFIAIGYKPNTKIFRH-QLKMTNTNYIWTMPDSTATSIPGIFAAGDVADERYRQAITAAAMGCMAA 306 (321)
Q Consensus 228 ~~~~g~~~~i~~D~vi~a~G~~pn~~~~~~-~~~~~~~g~i~~~~~~~~Ts~p~Iya~GDv~~~~~~~~~~A~~~G~~Aa 306 (321)
T Consensus 415 v~v~gse~~i~aD~VI~AIGQ~~d~~~~~~~gl~~~~~G~i~vd~~t~~Ts~~gVFAgGD~v~Gp-~tvV~AIa~Gr~AA 493 (652)
T PRK12814 415 VPVEGSEFTLQADTVISAIGQQVDPPIAEAAGIGTSRNGTVKVDPETLQTSVAGVFAGGDCVTGA-DIAINAVEQGKRAA 493 (652)
T ss_pred EECCCCEEEEECCEEEECCCCCCCCCHHHCCCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCCC-HHHHHHHHHHHHHH
T ss_conf 56599669961788998458788833222458636689988858888743999999898887684-49999999999999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999742
Q gi|254780283|r 307 LEVEHYLSIH 316 (321)
Q Consensus 307 ~~i~~yl~~~ 316 (321)
T Consensus 494 ~~Id~yL~G~ 503 (652)
T PRK12814 494 HAIDLFLNGK 503 (652)
T ss_pred HHHHHHHCCC
T ss_conf 9999985899