HHsearch alignment for GI: 254780283 and conserved domain: PTZ00318
>PTZ00318 NADH dehydrogenase; Provisional.
Probab=98.50 E-value=2e-07 Score=61.92 Aligned_cols=92 Identities=23% Similarity=0.338 Sum_probs=67.3
Q ss_pred EEEEECCCHHHHHHHHHHHHC--------------CCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 199998977799999999986--------------995999967887756875010078774777789789998664323
Q gi|254780283|r 7 KILIIGSGPAGYTAAIYAARA--------------MLKPVIIAGSDLGGQLMITESIENYPGFATSIRGDWLMEQMRQQA 72 (321)
Q Consensus 7 dVvIIG~GpAGl~aA~~l~r~--------------g~~v~iie~~~~GG~l~~~~~i~n~~g~~~~~~~~~l~~~~~~~~ 72 (321)
T Consensus 181 tfVVVGGGpTGVElAgeLad~~~~~~~~~~~~l~~~~~V~Liea~~----iL--------p~f~-----~~ls~~a~~~L 243 (514)
T PTZ00318 181 HTVVVGGGPTGVEFAANLAEFFRDDVKNINTSLVPFCKVTVLEAGE----VF--------GSFD-----LRVRRWGKRRL 243 (514)
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEEECHH----HH--------HCCC-----HHHHHHHHHHH
T ss_conf 2789777762032899999999988764281230100378860500----12--------1089-----89999999999
Q ss_pred HHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEE
Q ss_conf 20023222113320112222222222222222100001477664202
Q gi|254780283|r 73 ENFGTKIIQDLVVSVDLDRHPFLVETQSGDLWHADAVVIATGSEVKW 119 (321)
Q Consensus 73 ~~~~v~~~~~~V~~i~~~~~~~~v~~~~g~~~~a~~lIiAtG~~~~~ 119 (321)
T Consensus 244 ~~~GVeV~~~~vv~v~~~----~v~~~~Ge~i~~~tvVWtAGV~a~p 286 (514)
T PTZ00318 244 DALGVRIVKGAVVAVTDK----EVFTKSGEVLPTGLVVWSTGVGPSP 286 (514)
T ss_pred HHCCEEEEECCEEEEECC----EEEECCCCEEECCEEEEECCCCCCC
T ss_conf 878949983628998689----5896798199866899915887670