HHsearch alignment for GI: 254780283 and conserved domain: PTZ00318

>PTZ00318 NADH dehydrogenase; Provisional.
Probab=98.50  E-value=2e-07  Score=61.92  Aligned_cols=92  Identities=23%  Similarity=0.338  Sum_probs=67.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHC--------------CCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             199998977799999999986--------------995999967887756875010078774777789789998664323
Q gi|254780283|r    7 KILIIGSGPAGYTAAIYAARA--------------MLKPVIIAGSDLGGQLMITESIENYPGFATSIRGDWLMEQMRQQA   72 (321)
Q Consensus         7 dVvIIG~GpAGl~aA~~l~r~--------------g~~v~iie~~~~GG~l~~~~~i~n~~g~~~~~~~~~l~~~~~~~~   72 (321)
T Consensus       181 tfVVVGGGpTGVElAgeLad~~~~~~~~~~~~l~~~~~V~Liea~~----iL--------p~f~-----~~ls~~a~~~L  243 (514)
T PTZ00318        181 HTVVVGGGPTGVEFAANLAEFFRDDVKNINTSLVPFCKVTVLEAGE----VF--------GSFD-----LRVRRWGKRRL  243 (514)
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEEECHH----HH--------HCCC-----HHHHHHHHHHH
T ss_conf             2789777762032899999999988764281230100378860500----12--------1089-----89999999999


Q ss_pred             HHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCEE
Q ss_conf             20023222113320112222222222222222100001477664202
Q gi|254780283|r   73 ENFGTKIIQDLVVSVDLDRHPFLVETQSGDLWHADAVVIATGSEVKW  119 (321)
Q Consensus        73 ~~~~v~~~~~~V~~i~~~~~~~~v~~~~g~~~~a~~lIiAtG~~~~~  119 (321)
T Consensus       244 ~~~GVeV~~~~vv~v~~~----~v~~~~Ge~i~~~tvVWtAGV~a~p  286 (514)
T PTZ00318        244 DALGVRIVKGAVVAVTDK----EVFTKSGEVLPTGLVVWSTGVGPSP  286 (514)
T ss_pred             HHCCEEEEECCEEEEECC----EEEECCCCEEECCEEEEECCCCCCC
T ss_conf             878949983628998689----5896798199866899915887670