HHsearch alignment for GI: 254780283 and conserved domain: TIGR00136
>TIGR00136 gidA glucose-inhibited division protein A; InterPro: IPR004416 Glucose-inhibited division protein A, GidA appears to be present in all complete eubacterial genomes so far, as well as Saccharomyces cerevisiae. A subset of these organisms have a closely related protein. The function of these proteins is unknown..
Probab=96.35 E-value=0.0041 Score=36.77 Aligned_cols=111 Identities=28% Similarity=0.369 Sum_probs=63.2
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEEC--CCC---------CCEE--EEECCCC--------------------CC
Q ss_conf 5199998977799999999986995999967--887---------7568--7501007--------------------87
Q gi|254780283|r 6 SKILIIGSGPAGYTAAIYAARAMLKPVIIAG--SDL---------GGQL--MITESIE--------------------NY 52 (321)
Q Consensus 6 ~dVvIIG~GpAGl~aA~~l~r~g~~v~iie~--~~~---------GG~l--~~~~~i~--------------------n~ 52 (321)
T Consensus 1 ~~~~~~g~gh~g~e~~~~~~~~g~~~~~~~~~~~~~g~~~cnp~~gg~~~g~~~~e~d~lgg~~g~~~d~~~~~~~~ln~ 80 (630)
T TIGR00136 1 FDVIVIGGGHAGLEAALAAARLGAKTLLLTLNLDTLGKCPCNPAIGGPGKGILVKEIDALGGLMGKAADKTGLQFRLLNS 80 (630)
T ss_pred CEEEEECCCCCCHHHHHHHHHCCCEEEEEEECHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 90688617620035677765417513455404122202556644465323410002334201466655344444443204
Q ss_pred ---CC---CCCCCCHHHHHHHHHHHHH----HCCCCCCCEEEEECCCC-----C-CCCCCCCCCCCCCCCCEECCCCCCC
Q ss_conf ---74---7777897899986643232----00232221133201122-----2-2222222222222100001477664
Q gi|254780283|r 53 ---PG---FATSIRGDWLMEQMRQQAE----NFGTKIIQDLVVSVDLD-----R-HPFLVETQSGDLWHADAVVIATGSE 116 (321)
Q Consensus 53 ---~g---~~~~~~~~~l~~~~~~~~~----~~~v~~~~~~V~~i~~~-----~-~~~~v~~~~g~~~~a~~lIiAtG~~ 116 (321)
T Consensus 81 ~~gp~~~~~~~~~d~~~y~~~~~~~~~~~~~~pn~~~~~~~~~~~~~~~~gcg~~~~~g~~~~~g~~~~~~~~~~~~g~~ 160 (630)
T TIGR00136 81 SKGPAVRALRAQIDKLLYRKWAKNTLENQKAHPNLSLLQGEVEDLLLEDPGCGNDEVKGVVTKDGAEFRAKAVVLTTGTF 160 (630)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEECCC
T ss_conf 56641000245666899999999887531146533566767777764046888651246653046300023256740410