>TIGR00551 nadB L-aspartate oxidase; InterPro: IPR005288 L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase complex. Quinolinate synthetase makes a precursor of the pyridine nucleotide portion of NAD. This model identifies proteins that cluster as L-aspartate oxidase (a flavoprotein difficult to separate from the set of closely related flavoprotein subunits of succinate dehydrogenase and fumarate reductase) by both UPGMA and neighbour-joining trees.; GO: 0008734 L-aspartate oxidase activity, 0009435 NAD biosynthetic process, 0005737 cytoplasm.

Probab=99.37 E-value=2e-11 Score=85.28 Aligned_cols=113 Identities=26% Similarity=0.413 Sum_probs=75.3 Q ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECC-CC-CCEEEEEC----------------CC---------------- Q ss_conf 6751999989777999999999869959999678-87-75687501----------------00---------------- Q gi|254780283|r 4 HDSKILIIGSGPAGYTAAIYAARAMLKPVIIAGS-DL-GGQLMITE----------------SI---------------- 49 (321) Q Consensus 4 ~~~dVvIIG~GpAGl~aA~~l~r~g~~v~iie~~-~~-GG~l~~~~----------------~i---------------- 49 (321) T Consensus 1 ~~~dV~viGsGaAGL~aAlal~~~~~~V~v~~K~a~~~~~~s~yAQGGIAa~~~~~DdSi~~Hv~DTL~AGaG~cD~~aV 80 (546) T TIGR00551 1 SEADVVVIGSGAAGLSAALALAEKYRDVVVISKAAEVKESASYYAQGGIAAALAETDDSIDAHVEDTLAAGAGLCDEEAV 80 (546) T ss_pred CCCEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEECCCEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHH T ss_conf 96359997520899999985332686378975875555675200011266303875585687789999844678868899 Q ss_pred ----------------------CCCCC--------------------CCC-CCCHHHHHHHHHHHHH-HCCCCCCCE-EE Q ss_conf ----------------------78774--------------------777-7897899986643232-002322211-33 Q gi|254780283|r 50 ----------------------ENYPG--------------------FAT-SIRGDWLMEQMRQQAE-NFGTKIIQD-LV 84 (321) Q Consensus 50 ----------------------~n~~g--------------------~~~-~~~~~~l~~~~~~~~~-~~~v~~~~~-~V 84 (321) T Consensus 81 ~~v~~~~~~av~~L~~~Gv~FD~~~~gnGee~~~LtrEGgHS~~RI~HA~GDaTGr~~~~~L~~~a~~~p~~~~~~~~~A 160 (546) T TIGR00551 81 EFVVSDAKEAVQELVEAGVSFDRNEQGNGEERLALTREGGHSYRRILHAAGDATGREVISTLLKKARSEPNVEIIEGEVA 160 (546) T ss_pred HHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEECCCCEE T ss_conf 99985368999999866922026779887443100133566777427735763248999999999743776241012144 Q ss_pred EECCCC-------CCC---CCCCCC-CC--CCCCCCEECCCCCCC Q ss_conf 201122-------222---222222-22--222100001477664 Q gi|254780283|r 85 VSVDLD-------RHP---FLVETQ-SG--DLWHADAVVIATGSE 116 (321) Q Consensus 85 ~~i~~~-------~~~---~~v~~~-~g--~~~~a~~lIiAtG~~ 116 (321) T Consensus 161 ~~l~i~dkiGlP~~g~~~G~~v~~~nK~~~e~~~a~aVvLAtGG~ 205 (546) T TIGR00551 161 LDLLIEDKIGLPTTGRVVGVLVVDSNKETVETLHADAVVLATGGL 205 (546) T ss_pred EEEEECCCCCCCCCCEEEEEEEECCCCCEEEEEECCEEEEECCCC T ss_conf 444422502479888799999971678723776301000320773

HHsearch alignment for GI: 254780283 and conserved domain: TIGR00551