HHsearch alignment for GI: 254780283 and conserved domain: TIGR01292

>TIGR01292 TRX_reduct thioredoxin-disulfide reductase; InterPro: IPR005982 Reactive oxygen species (ROS) are known mediators of intracellular signaling cascades. Excessive production of ROS may, however, lead to oxidative stress, loss of cell function, and ultimately apoptosis or necrosis. A balance between oxidant and antioxidant intracellular systems is hence vital for cell function, regulation, and adaptation to diverse growth conditions. Thioredoxin reductase in conjunction with thioredoxin is a ubiquitous oxidoreductase system with antioxidant and redox regulatory roles. Thioredoxin reductase (1.8.1.9 from EC) reduces oxidised thioredoxin in the presence of NADPH. Reduced thioredoxin serves as an electron donor for thioredoxin peroxidase which consequently reduces H_2O_2 to H_2O. In mammals, extracellular forms of Trx also have cytokine-like effects. Mammalian TrxR has a highly reactive active site selenocysteine residue resulting in a profound reductive capacity, reducing several substrates in addition to Trx .; GO: 0004791 thioredoxin-disulfide reductase activity, 0019430 removal of superoxide radicals, 0005737 cytoplasm.
Probab=100.00  E-value=0  Score=594.70  Aligned_cols=301  Identities=50%  Similarity=0.826  Sum_probs=290.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCC---CEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC-
Q ss_conf             51999989777999999999869959999678877---56875010078774777789789998664323200232221-
Q gi|254780283|r    6 SKILIIGSGPAGYTAAIYAARAMLKPVIIAGSDLG---GQLMITESIENYPGFATSIRGDWLMEQMRQQAENFGTKIIQ-   81 (321)
Q Consensus         6 ~dVvIIG~GpAGl~aA~~l~r~g~~v~iie~~~~G---G~l~~~~~i~n~~g~~~~~~~~~l~~~~~~~~~~~~v~~~~-   81 (321)
T Consensus         1 ~DviIIGaGPAGlTAAIYa~Ra~l~~l~~eg~~~G~aGGql~~T~~vENYPGf~e~i~G~~L~~~M~~Qa~~fG~~~~~G   80 (321)
T TIGR01292         1 YDVIIIGAGPAGLTAAIYAARANLKTLLIEGMEPGIAGGQLTTTTEVENYPGFPEGISGPELMEKMKEQAKKFGAEIIYG   80 (321)
T ss_pred             CCEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEC
T ss_conf             92899847867888999988746727898357777455533322065136868887662889999999998706736626


Q ss_pred             EEEEECCCCCC-----CCCCCCCCCCCCCCCEECCCCCCCCEEEEEC-CCCCCCEEECCCCCCCCC--CCCCCCCEEEEE
Q ss_conf             13320112222-----2222222222221000014776642024652-774332021012111111--111221000010
Q gi|254780283|r   82 DLVVSVDLDRH-----PFLVETQSGDLWHADAVVIATGSEVKWLRLE-SEKKFQGFGVSACATCDG--FFYKNKDVIVVG  153 (321)
Q Consensus        82 ~~V~~i~~~~~-----~~~v~~~~g~~~~a~~lIiAtG~~~~~~~ip-G~~~~~~~~v~~~~~~d~--~~~~~k~v~ViG  153 (321)
T Consensus        81 ~~v~~v~~~~~~yE~~~F~~~~~--~~y~a~avIiAtGa~~r~lg~~kGE~ef~GrGVSyCA~CDGA~~ffk~K~V~VvG  158 (321)
T TIGR01292        81 EEVIRVDKSDRAYESDPFKVKTG--KEYTAKAVIIATGAEARKLGIPKGEDEFLGRGVSYCATCDGASPFFKNKEVAVVG  158 (321)
T ss_pred             CEEEEEECCCCCCCCCEEEEEEC--CEEEEEEEEEECCCHHHHCCCCCCHHHHCCCCEEEEEHHCCCCHHHCCCEEEEEC
T ss_conf             70568633788436610389717--5688658999138715423788664553268666722310540120598899987


Q ss_pred             CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCEEECCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf             255654310121013332223443433221111211223554--433222231121148643334444433314203210
Q gi|254780283|r  154 GGNTAAEEALHLAKIARRVTIVHRRSSLRSEKILQEKLFLQS--NIDFLFDTEVVDVIGSIPEPPLFPSVSGVRLHNKKE  231 (321)
Q Consensus       154 gG~~g~e~A~~L~~~~~~Vtli~r~~~l~~~~~~~~~~~~~~--~i~~~~~~~v~~i~g~~~~~~~~~~~~~v~~~~~~~  231 (321)
T Consensus       159 GGdsA~eEA~yL~~~a~kV~lvHRRd~fRA~k~~~~r~~~~~eG~I~~l~n~~v~Ei~G~~~~-----~V~~v~i~N~~t  233 (321)
T TIGR01292       159 GGDSALEEALYLTRIAKKVTLVHRRDKFRAEKILLDRLKKNPEGKIEFLWNSTVEEIVGDNSK-----KVESVKIKNTVT  233 (321)
T ss_pred             CCCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCEEEEEECCCCE-----EEEEEEEEECCC
T ss_conf             982488888999853876799977986363289998998378987899648689999617831-----553358996238


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHCC--CCEECCCCEEEECC---CCCCCCCCEEEECCCCCC-CHHHHHHHHHHHHHH
Q ss_conf             000011222211123223565677425--61806997990088---855478982897012688-445678999979999
Q gi|254780283|r  232 GNFFERNVDGIFIAIGYKPNTKIFRHQ--LKMTNTNYIWTMPD---STATSIPGIFAAGDVADE-RYRQAITAAAMGCMA  305 (321)
Q Consensus       232 g~~~~i~~D~vi~a~G~~pn~~~~~~~--~~~~~~g~i~~~~~---~~~Ts~p~Iya~GDv~~~-~~~~~~~A~~~G~~A  305 (321)
T Consensus       234 ~e~~~l~vdGvF~aIG~~P~t~~~~~~G~~~~D~~GyI~t~~~~Gn~~~Tsv~GvFAAGDv~~kW~~rQ~vTAag~G~~A  313 (321)
T TIGR01292       234 GEEEELKVDGVFIAIGHEPNTELLKGLGLLELDEGGYIVTDEGLGNTMRTSVPGVFAAGDVRDKWGFRQAVTAAGDGCIA  313 (321)
T ss_pred             CEEEEEEECEEEEEECCCCCHHHHHCCCCEEECCCCCEEECCCCCCEEECCCCCEEEEEEEECCCCCEEEEEEECHHHHH
T ss_conf             84889984447898412032057650783467699868861754861230668689730440688613767870006899


Q ss_pred             HHHHHHHH
Q ss_conf             99999999
Q gi|254780283|r  306 ALEVEHYL  313 (321)
Q Consensus       306 a~~i~~yl  313 (321)
T Consensus       314 A~~a~~yL  321 (321)
T TIGR01292       314 ALSAERYL  321 (321)
T ss_pred             HHHHHHHC
T ss_conf             99998709