HHsearch alignment for GI: 254780283 and conserved domain: TIGR01316
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric; InterPro: IPR006004 One pathway for the assimilation of ammonia and glutamate biosynthesis involves homotetrameric glutamate synthase (1.4.1.13 from EC) which transfers the amide group of glutamine to 2-oxoglutarate to yield two molecules of glutamate . 2 L-glutamate + NADP^+ = L-glutamine + 2-oxoglutarate + NADPH + H^+. .
Probab=97.89 E-value=5.8e-05 Score=47.60 Aligned_cols=120 Identities=23% Similarity=0.256 Sum_probs=69.1
Q ss_pred CEECCCCCCCCEEE----EECCCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCC----
Q ss_conf 00014776642024----6527743320210121111111112210000102556543101210133322234434----
Q gi|254780283|r 107 DAVVIATGSEVKWL----RLESEKKFQGFGVSACATCDGFFYKNKDVIVVGGGNTAAEEALHLAKIARRVTIVHRR---- 178 (321)
Q Consensus 107 ~~lIiAtG~~~~~~----~ipG~~~~~~~~v~~~~~~d~~~~~~k~v~ViGgG~~g~e~A~~L~~~~~~Vtli~r~---- 178 (321)
T Consensus 104 vg~pV~IGaLErFVaD~~R~hGi~~el---lref~ek~p~--t~~kVAViGaGPAGL~cA~elAk~Gh~VtvfEALhKPG 178 (462)
T TIGR01316 104 VGKPVAIGALERFVADYAREHGIEEEL---LREFEEKAPS--TKKKVAVIGAGPAGLACASELAKKGHEVTVFEALHKPG 178 (462)
T ss_pred CCCCEECCCHHHHHHHHCCCCCEEEEE---ECCCCCCCCC--CCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCC
T ss_conf 588200020110132220147703421---0015456788--88779998468214688999974798699997148998
Q ss_pred -------CCCCCCCCCC----CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf -------3322111121----12235544332222311211486433344444333142032100000112222111232
Q gi|254780283|r 179 -------SSLRSEKILQ----EKLFLQSNIDFLFDTEVVDVIGSIPEPPLFPSVSGVRLHNKKEGNFFERNVDGIFIAIG 247 (321)
Q Consensus 179 -------~~l~~~~~~~----~~~~~~~~i~~~~~~~v~~i~g~~~~~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G 247 (321)
T Consensus 179 GV~~YGIPefRLpKei~~~E~k~L-kklGv~fr~~~lvGk----t-----------~TL~----eL~~~YGfDAVFIgtG 238 (462)
T TIGR01316 179 GVLAYGIPEFRLPKEIVETEVKKL-KKLGVKFRTDYLVGK----T-----------VTLE----ELLEKYGFDAVFIGTG 238 (462)
T ss_pred CEEEECCCCCCCCHHHHHHHHHHH-HHCCEEEEECCEECC----C-----------HHHH----HHHHHCCCCEEEEEEC
T ss_conf 567536888548757889888876-326637994437505----1-----------1288----8887519707999506
Q ss_pred CC-CC
Q ss_conf 23-56
Q gi|254780283|r 248 YK-PN 251 (321)
Q Consensus 248 ~~-pn 251 (321)
T Consensus 239 AG~pk 243 (462)
T TIGR01316 239 AGLPK 243 (462)
T ss_pred CCCCE
T ss_conf 89870