HHsearch alignment for GI: 254780283 and conserved domain: TIGR02279
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC; InterPro: IPR011967 This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring . The sequences included in this entry are all found in possible operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN . Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. .
Probab=93.72 E-value=0.089 Score=28.98 Aligned_cols=37 Identities=27% Similarity=0.242 Sum_probs=29.8
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf 9876751999989777999999999869959999678
Q gi|254780283|r 1 MASHDSKILIIGSGPAGYTAAIYAARAMLKPVIIAGS 37 (321)
Q Consensus 1 M~~~~~dVvIIG~GpAGl~aA~~l~r~g~~v~iie~~ 37 (321)
T Consensus 1 al~~~v~vaVIGaGaMGaGIA~VAA~aGH~V~LYD~r 37 (508)
T TIGR02279 1 ALINVVKVAVIGAGAMGAGIAQVAARAGHQVLLYDIR 37 (508)
T ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEECCC
T ss_conf 9654106899646852103899998259848872288