HHsearch alignment for GI: 254780283 and conserved domain: TIGR02730
>TIGR02730 carot_isom carotene isomerase; InterPro: IPR014101 Members of this family, including sll0033 (crtH) of Synechocystis sp. (strain PCC 6803), catalyse a cis-trans isomerization of carotenes to the all-trans lycopene, a reaction that can also occur non-enzymatically in light through photoisomerization..
Probab=97.37 E-value=0.00019 Score=44.59 Aligned_cols=36 Identities=28% Similarity=0.343 Sum_probs=33.0
Q ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCC-CCC
Q ss_conf 519999897779999999998699599996788-775
Q gi|254780283|r 6 SKILIIGSGPAGYTAAIYAARAMLKPVIIAGSD-LGG 41 (321)
Q Consensus 6 ~dVvIIG~GpAGl~aA~~l~r~g~~v~iie~~~-~GG 41 (321)
T Consensus 1 yDaiVIGSGIGGLVtAtQLa~KGakvLVLE~Y~IPGG 37 (506)
T TIGR02730 1 YDAIVIGSGIGGLVTATQLAAKGAKVLVLERYLIPGG 37 (506)
T ss_pred CCEEEEECCCHHHHHHHHHHHCCCEEEEEEEEECCCC
T ss_conf 9478981683178999999854622553220114788