HHsearch alignment for GI: 254780283 and conserved domain: TIGR03385

>TIGR03385 CoA_CoA_reduc CoA-disulfide reductase. Members of this protein family are CoA-disulfide reductase (EC 1.8.1.14), as characterized in Staphylococcus aureus, Pyrococcus horikoshii, and Borrelia burgdorferi, and inferred in several other species on the basis of high levels of CoA and an absence of glutathione as a protective thiol.
Probab=100.00  E-value=1.4e-42  Score=267.18  Aligned_cols=271  Identities=22%  Similarity=0.314  Sum_probs=190.6

Q ss_pred             HHHHHHHHCCC--CEEEEECCCCCCEEEEECCCCCCCCCCCCCCH-HHHHHHH-HHHHHHCCCCCCCE-EEEECCCCCCC
Q ss_conf             99999998699--59999678877568750100787747777897-8999866-43232002322211-33201122222
Q gi|254780283|r   19 TAAIYAARAML--KPVIIAGSDLGGQLMITESIENYPGFATSIRG-DWLMEQM-RQQAENFGTKIIQD-LVVSVDLDRHP   93 (321)
Q Consensus        19 ~aA~~l~r~g~--~v~iie~~~~GG~l~~~~~i~n~~g~~~~~~~-~~l~~~~-~~~~~~~~v~~~~~-~V~~i~~~~~~   93 (321)
T Consensus         1 saA~~~rrl~p~~eI~vi~~~~~~--~y~~c~lp~~l~g--~i~~~~~l~~~~~e~~~~~~~I~v~~~~~V~~ID~~~k~   76 (427)
T TIGR03385         1 SAASRVRRLDKESDIIVFEKTEDV--SFANCGLPYVIGG--VIDDRNKLLAYTPEKFIEKRGIDVKTNHEVIKVNDERQT   76 (427)
T ss_pred             CHHHHHHHHCCCCCEEEEECCCCC--CCHHHHHHHHHCC--CCCCHHHCCCCCHHHHHHHCCCEEECCCEEEEEECCCCE
T ss_conf             977988843989978999679986--4356455697777--227878721679899998789499918979999899999


Q ss_pred             CCCCCC-CCC--CCCCCEECCCCCCCCEEEEECCCCCCCEEECCCCCCCC------CCC--CCCCCEEEEECCCCCCCCE
Q ss_conf             222222-222--22100001477664202465277433202101211111------111--1221000010255654310
Q gi|254780283|r   94 FLVETQ-SGD--LWHADAVVIATGSEVKWLRLESEKKFQGFGVSACATCD------GFF--YKNKDVIVVGGGNTAAEEA  162 (321)
Q Consensus        94 ~~v~~~-~g~--~~~a~~lIiAtG~~~~~~~ipG~~~~~~~~v~~~~~~d------~~~--~~~k~v~ViGgG~~g~e~A  162 (321)
T Consensus        77 V~~~~~~~~~~~~~~YDkLiiATGs~p~~p~i~g~~~~---~V~~lr~~~Da~~i~~~l~~~~~k~vvViGgG~IGlE~A  153 (427)
T TIGR03385        77 VVVKNNKTNETYEESYDYLILSPGASPIIPNIEGINLD---ITFTLRNLEDTDAIKQYIDANKVDRVVIIGGGYIGLEMV  153 (427)
T ss_pred             EEEEECCCCCEEECCCCEEEECCCCCCCCCCCCCCCCC---CEEEECCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHH
T ss_conf             99966798966445789999976998567999986789---889979999999999987507998899999639999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCC---CCCC---CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEECCCCCCCCCC
Q ss_conf             121013332223443433221---1112---1122355443322223112114864333444443331420321000001
Q gi|254780283|r  163 LHLAKIARRVTIVHRRSSLRS---EKIL---QEKLFLQSNIDFLFDTEVVDVIGSIPEPPLFPSVSGVRLHNKKEGNFFE  236 (321)
Q Consensus       163 ~~L~~~~~~Vtli~r~~~l~~---~~~~---~~~~~~~~~i~~~~~~~v~~i~g~~~~~~~~~~~~~v~~~~~~~g~~~~  236 (321)
T Consensus       154 ~~l~~~G~~Vtvve~~~~il~~~~d~~~~~~~~~~l~~~Gv~i~~~~~v~~i~~~~~~---------~~l~---~g--~~  219 (427)
T TIGR03385       154 EALRERGKNVTLIHRSDKILNKLFDEEMNQIVEEELEKHEIELRLNEEVDSIIGEERV---------GVIT---SG--GV  219 (427)
T ss_pred             HHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCEEEEEECCCCE---------EEEE---CC--CE
T ss_conf             9999769989999846833655489999999999999759799979889999878878---------9994---69--99


Q ss_pred             CCCCCCCCCCCCCCCHHHHHC-CCCEECCCCEEEECCCCCCCCCCEEEECCCCCCCH---------HHHHHHHHHHHHHH
Q ss_conf             122221112322356567742-56180699799008885547898289701268844---------56789999799999
Q gi|254780283|r  237 RNVDGIFIAIGYKPNTKIFRH-QLKMTNTNYIWTMPDSTATSIPGIFAAGDVADERY---------RQAITAAAMGCMAA  306 (321)
Q Consensus       237 i~~D~vi~a~G~~pn~~~~~~-~~~~~~~g~i~~~~~~~~Ts~p~Iya~GDv~~~~~---------~~~~~A~~~G~~Aa  306 (321)
T Consensus       220 i~~D~vi~a~G~~Pn~~~~~~~gl~~~~~G~I~-Vd~~~~Ts~p~IyA~GD~a~~~~~~t~~~~~~~l~~~A~~qgriaa  298 (427)
T TIGR03385       220 YQADMVILAIGVKPNSELAKDSQLKLGRTGAIW-VNEKFQTSVPNIYAAGDVAESKNIVTKKPAWIPLAWGANKMGRIVG  298 (427)
T ss_pred             EECCEEEECCCCCCCCCCCCCCCCEECCCCCEE-CCCCCCCCCCCEEEEECEEECCCCCCCCCCEECCHHHHHHHHHHHH
T ss_conf             972899988774676424325561665888685-2765543689999982104114555688423415689999999999


Q ss_pred             HHHHH
Q ss_conf             99999
Q gi|254780283|r  307 LEVEH  311 (321)
Q Consensus       307 ~~i~~  311 (321)
T Consensus       299 ~ni~g  303 (427)
T TIGR03385       299 ENIAG  303 (427)
T ss_pred             HHHCC
T ss_conf             97459