HHsearch alignment for GI: 254780283 and conserved domain: pfam01494
>pfam01494 FAD_binding_3 FAD binding domain. This domain is involved in FAD binding in a number of enzymes.
Probab=99.20 E-value=1.2e-10 Score=80.79 Aligned_cols=112 Identities=21% Similarity=0.262 Sum_probs=69.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCC---CCCE-EEEEC-------------------------CCC-C---
Q ss_conf 7519999897779999999998699599996788---7756-87501-------------------------007-8---
Q gi|254780283|r 5 DSKILIIGSGPAGYTAAIYAARAMLKPVIIAGSD---LGGQ-LMITE-------------------------SIE-N--- 51 (321)
Q Consensus 5 ~~dVvIIG~GpAGl~aA~~l~r~g~~v~iie~~~---~GG~-l~~~~-------------------------~i~-n--- 51 (321)
T Consensus 1 ~~DV~IvGaG~aGl~lA~~L~~~Gi~v~V~Er~~~~~~~g~g~~l~p~~~~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~ 80 (349)
T pfam01494 1 ETDVLIVGGGPAGLMLALLLARAGVRVVLVERHATTSVLPRAGGLNQRTMELLRQAGLEDRILAEGAPHEGMGLAFYNTS 80 (349)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEECHHHHHHHHHCCCHHHHHHCCCCCCEEEEEECCCC
T ss_conf 99789999288999999999877998999928999887877999898999999987986899850687510599983786
Q ss_pred -------CC---CCCCCCCHHHHHHHHHHHHHHCCCCCCCE-EEEECCCCCCCCCCCCCCC-----CCCCCCEECCCCCC
Q ss_conf -------77---47777897899986643232002322211-3320112222222222222-----22210000147766
Q gi|254780283|r 52 -------YP---GFATSIRGDWLMEQMRQQAENFGTKIIQD-LVVSVDLDRHPFLVETQSG-----DLWHADAVVIATGS 115 (321)
Q Consensus 52 -------~~---g~~~~~~~~~l~~~~~~~~~~~~v~~~~~-~V~~i~~~~~~~~v~~~~g-----~~~~a~~lIiAtG~ 115 (321)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~i~~~~~v~~~~~~~~~v~~~~~~~~~~~~~~i~adlvIgADG~ 160 (349)
T pfam01494 81 RRRADLDFLTSPPRVTVYPQTELEPILREHAEARGAQVRFGTEVLSLEQDGDGVTAVVRDRRDGEEYTVRAKYLVGCDGG 160 (349)
T ss_pred CCEEECCCCCCCCCEEEECHHHHHHHHHHHHHHCCCEEEECCEEEEEEECCCCEEEEEEECCCCCEEEEEEEEEECCCCC
T ss_conf 42220145567762688629999999999998579989966178775205994379998458995589997688415777
Q ss_pred C
Q ss_conf 4
Q gi|254780283|r 116 E 116 (321)
Q Consensus 116 ~ 116 (321)
T Consensus 161 ~ 161 (349)
T pfam01494 161 R 161 (349)
T ss_pred C
T ss_conf 6