HHsearch alignment for GI: 254780283 and conserved domain: pfam01494

>pfam01494 FAD_binding_3 FAD binding domain. This domain is involved in FAD binding in a number of enzymes.
Probab=99.20  E-value=1.2e-10  Score=80.79  Aligned_cols=112  Identities=21%  Similarity=0.262  Sum_probs=69.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCC---CCCE-EEEEC-------------------------CCC-C---
Q ss_conf             7519999897779999999998699599996788---7756-87501-------------------------007-8---
Q gi|254780283|r    5 DSKILIIGSGPAGYTAAIYAARAMLKPVIIAGSD---LGGQ-LMITE-------------------------SIE-N---   51 (321)
Q Consensus         5 ~~dVvIIG~GpAGl~aA~~l~r~g~~v~iie~~~---~GG~-l~~~~-------------------------~i~-n---   51 (321)
T Consensus         1 ~~DV~IvGaG~aGl~lA~~L~~~Gi~v~V~Er~~~~~~~g~g~~l~p~~~~~L~~lGl~~~~~~~~~~~~~~~~~~~~~~   80 (349)
T pfam01494         1 ETDVLIVGGGPAGLMLALLLARAGVRVVLVERHATTSVLPRAGGLNQRTMELLRQAGLEDRILAEGAPHEGMGLAFYNTS   80 (349)
T ss_pred             CCCEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEECHHHHHHHHHCCCHHHHHHCCCCCCEEEEEECCCC
T ss_conf             99789999288999999999877998999928999887877999898999999987986899850687510599983786


Q ss_pred             -------CC---CCCCCCCHHHHHHHHHHHHHHCCCCCCCE-EEEECCCCCCCCCCCCCCC-----CCCCCCEECCCCCC
Q ss_conf             -------77---47777897899986643232002322211-3320112222222222222-----22210000147766
Q gi|254780283|r   52 -------YP---GFATSIRGDWLMEQMRQQAENFGTKIIQD-LVVSVDLDRHPFLVETQSG-----DLWHADAVVIATGS  115 (321)
Q Consensus        52 -------~~---g~~~~~~~~~l~~~~~~~~~~~~v~~~~~-~V~~i~~~~~~~~v~~~~g-----~~~~a~~lIiAtG~  115 (321)
T Consensus        81 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~i~~~~~v~~~~~~~~~v~~~~~~~~~~~~~~i~adlvIgADG~  160 (349)
T pfam01494        81 RRRADLDFLTSPPRVTVYPQTELEPILREHAEARGAQVRFGTEVLSLEQDGDGVTAVVRDRRDGEEYTVRAKYLVGCDGG  160 (349)
T ss_pred             CCEEECCCCCCCCCEEEECHHHHHHHHHHHHHHCCCEEEECCEEEEEEECCCCEEEEEEECCCCCEEEEEEEEEECCCCC
T ss_conf             42220145567762688629999999999998579989966178775205994379998458995589997688415777


Q ss_pred             C
Q ss_conf             4
Q gi|254780283|r  116 E  116 (321)
Q Consensus       116 ~  116 (321)
T Consensus       161 ~  161 (349)
T pfam01494       161 R  161 (349)
T ss_pred             C
T ss_conf             6