BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= gi|254780284|ref|YP_003064697.1| hypothetical protein
CLIBASIA_00845 [Candidatus Liberibacter asiaticus str. psy62]
         (623 letters)

Database: las_proteome 
           1233 sequences; 328,796 total letters

Searching...................................................done



>gi|254780284|ref|YP_003064697.1| hypothetical protein CLIBASIA_00845 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 623

 Score = 1258 bits (3255), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/623 (100%), Positives = 623/623 (100%)

Query: 1   MKNEKEFLDKRDASFRIGQFPSSIPSLDSSIKDYSRQLTNIFLKDKVFFDGLEQELLASL 60
           MKNEKEFLDKRDASFRIGQFPSSIPSLDSSIKDYSRQLTNIFLKDKVFFDGLEQELLASL
Sbjct: 1   MKNEKEFLDKRDASFRIGQFPSSIPSLDSSIKDYSRQLTNIFLKDKVFFDGLEQELLASL 60

Query: 61  GSMGQEKFVSYARKKRSQRSPEDQLPSSKHLSPRFGSAHENFFDCDLENKPFPVETVVEK 120
           GSMGQEKFVSYARKKRSQRSPEDQLPSSKHLSPRFGSAHENFFDCDLENKPFPVETVVEK
Sbjct: 61  GSMGQEKFVSYARKKRSQRSPEDQLPSSKHLSPRFGSAHENFFDCDLENKPFPVETVVEK 120

Query: 121 KENVDKSLQSKPSTDLLVQATSFLKESVIDYPDCDSEIMRGLDDDLDRCFEKKDRTSAIQ 180
           KENVDKSLQSKPSTDLLVQATSFLKESVIDYPDCDSEIMRGLDDDLDRCFEKKDRTSAIQ
Sbjct: 121 KENVDKSLQSKPSTDLLVQATSFLKESVIDYPDCDSEIMRGLDDDLDRCFEKKDRTSAIQ 180

Query: 181 LDKTEEILKGELTDKTDSSFSDSMAKYGTGMSSALEGKKENIFLADDQGISLKSKEDMLT 240
           LDKTEEILKGELTDKTDSSFSDSMAKYGTGMSSALEGKKENIFLADDQGISLKSKEDMLT
Sbjct: 181 LDKTEEILKGELTDKTDSSFSDSMAKYGTGMSSALEGKKENIFLADDQGISLKSKEDMLT 240

Query: 241 LDIQSLEKSPVDDCGISLTESPKKRLGSHSAIDDDLGLDFGDIEKELLSISGCANRESDS 300
           LDIQSLEKSPVDDCGISLTESPKKRLGSHSAIDDDLGLDFGDIEKELLSISGCANRESDS
Sbjct: 241 LDIQSLEKSPVDDCGISLTESPKKRLGSHSAIDDDLGLDFGDIEKELLSISGCANRESDS 300

Query: 301 RDQEKKSSDIEKSESQGPVFDLKKIVRFEEYPKDMDELVISSLLVDEEKLSLEKVNHSLE 360
           RDQEKKSSDIEKSESQGPVFDLKKIVRFEEYPKDMDELVISSLLVDEEKLSLEKVNHSLE
Sbjct: 301 RDQEKKSSDIEKSESQGPVFDLKKIVRFEEYPKDMDELVISSLLVDEEKLSLEKVNHSLE 360

Query: 361 QDIATLSFEEGGKKYLFNSNTEGIARGISINRDCSLGDDVHRENMFSAPEISVDGFHEGS 420
           QDIATLSFEEGGKKYLFNSNTEGIARGISINRDCSLGDDVHRENMFSAPEISVDGFHEGS
Sbjct: 361 QDIATLSFEEGGKKYLFNSNTEGIARGISINRDCSLGDDVHRENMFSAPEISVDGFHEGS 420

Query: 421 SLVSPALKSNSKRDVAQNRKFWLIGYILIVVGCGIYWFFQLHREISFANEKPLIVNAIKD 480
           SLVSPALKSNSKRDVAQNRKFWLIGYILIVVGCGIYWFFQLHREISFANEKPLIVNAIKD
Sbjct: 421 SLVSPALKSNSKRDVAQNRKFWLIGYILIVVGCGIYWFFQLHREISFANEKPLIVNAIKD 480

Query: 481 PMKVIPSSSEEENDTSFNQVHEVYDRFSGEKPSSPKQKTLLNLQEKPIDFPVQNQETSHY 540
           PMKVIPSSSEEENDTSFNQVHEVYDRFSGEKPSSPKQKTLLNLQEKPIDFPVQNQETSHY
Sbjct: 481 PMKVIPSSSEEENDTSFNQVHEVYDRFSGEKPSSPKQKTLLNLQEKPIDFPVQNQETSHY 540

Query: 541 KSPSIIENSIRDIQAVSQVSVAENEDRSRSESIIVEKEIPQLSQQSSFLMDNKENFQGVD 600
           KSPSIIENSIRDIQAVSQVSVAENEDRSRSESIIVEKEIPQLSQQSSFLMDNKENFQGVD
Sbjct: 541 KSPSIIENSIRDIQAVSQVSVAENEDRSRSESIIVEKEIPQLSQQSSFLMDNKENFQGVD 600

Query: 601 SLQINLSKLKGNIPVPRSYSNRS 623
           SLQINLSKLKGNIPVPRSYSNRS
Sbjct: 601 SLQINLSKLKGNIPVPRSYSNRS 623


>gi|254781148|ref|YP_003065561.1| hypothetical protein CLIBASIA_05275 [Candidatus Liberibacter
          asiaticus str. psy62]
          Length = 69

 Score = 26.2 bits (56), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 5/33 (15%)

Query: 28 DSSIKDYSRQLTNIFLKDKVFFDGLEQELLASL 60
          D S K YSR   +I+     +F GLEQE+L SL
Sbjct: 4  DFSKKYYSRNNNSIY-----YFIGLEQEILGSL 31


>gi|254781090|ref|YP_003065503.1| hypothetical protein CLIBASIA_04960 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 71

 Score = 24.6 bits (52), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 10/23 (43%), Positives = 15/23 (65%)

Query: 144 LKESVIDYPDCDSEIMRGLDDDL 166
           L + + DYPDCD E+   + DD+
Sbjct: 48  LADFIKDYPDCDLELENLVTDDI 70


>gi|254780274|ref|YP_003064687.1| lysophospholipase protein [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 317

 Score = 24.3 bits (51), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 15/75 (20%), Positives = 35/75 (46%), Gaps = 6/75 (8%)

Query: 23  SIPSLDSSIKDYSRQLTNIFLKDKVFFDG------LEQELLASLGSMGQEKFVSYARKKR 76
           ++ +LD   + YS  L  + LK + FF G      L + L   L +   + + ++ +   
Sbjct: 133 ALWNLDLCFEKYSCMLMTLLLKIEKFFKGSDTPSRLMRHLTTDLWNRNNQNWKNFLKDHS 192

Query: 77  SQRSPEDQLPSSKHL 91
            +++ ++ +  S H+
Sbjct: 193 VKKNSQNYILDSNHI 207


  Database: las_proteome
    Posted date:  Jun 5, 2011  6:30 PM
  Number of letters in database: 328,796
  Number of sequences in database:  1233
  
Lambda     K      H
   0.311    0.131    0.358 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 404,822
Number of Sequences: 1233
Number of extensions: 17954
Number of successful extensions: 64
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 54
Number of HSP's gapped (non-prelim): 18
length of query: 623
length of database: 328,796
effective HSP length: 79
effective length of query: 544
effective length of database: 231,389
effective search space: 125875616
effective search space used: 125875616
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 41 (20.4 bits)