HHsearch alignment for GI: 254780285 and conserved domain: PRK00750
>PRK00750 lysK lysyl-tRNA synthetase; Reviewed.
Probab=98.93 E-value=2e-06 Score=64.06 Aligned_cols=268 Identities=17% Similarity=0.240 Sum_probs=135.7
Q ss_pred CEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC-CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
Q ss_conf 100022344322441177777856899999999850-6664102014775314555678987532221024500066011
Q gi|254780285|r 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS-GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 (586)
Q Consensus 122 kVvVE~sSpNp~KplHVGHlRsaiIGdsi~ril~~~-G~~V~r~nyvgD~G~Q~~~li~~~~~~~~~~~~~~~~~~~e~~ 200 (586)
T Consensus 30 ~vv~~-tG~~pSG~~HiG~~~Ev~~~~~V~~al~~~~g~~~~~i~~~Dd~D~l------------Rk----vp~~~p~-- 90 (513)
T PRK00750 30 EVLFE-TGYGPSGLPHIGTFGEVARTTMVRRALRDLTGIKTRLIYFSDDMDGL------------RK----VPDNVPN-- 90 (513)
T ss_pred EEEEE-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC------------CC----CCCCCCC--
T ss_conf 39993-68689988623045226669999999998459966899985177654------------34----6889998--
Q ss_pred CCCCCHHHHHHHHHHHH-HHHHHCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHCCH--HHHHHH
Q ss_conf 02410000127888887-5764134302-3799999997899887545558870875210001588730104--579999
Q gi|254780285|r 201 YPGVYLKHVGKELADKY-SSELLNFPEE-KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP--SPIRDI 276 (586)
Q Consensus 201 ~~~~y~~~~~~e~~~~~-~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~l~~l~i~fD~~~~Es~~~~~~~--~~i~~~ 276 (586)
T Consensus 91 ----------~e~~~~~lg~Pl~~iPdP~g~~~---Sy-a~h~~~~~~~~l~~~gi~~e~~s-~te~Y~sG~f~~~i~~~ 155 (513)
T PRK00750 91 ----------QEMLAEHLGKPLTSVPDPFGTHE---SY-AEHNNARLREFLDKFGFEYEFIS-ATECYKSGRFDEALLKA 155 (513)
T ss_pred ----------HHHHHHHCCCCCCCCCCCCCCCC---CH-HHHHHHHHHHHHHHCCCCEEEEE-HHHHHHCCCHHHHHHHH
T ss_conf ----------49999874996640799888757---69-99999999999998398339976-78766448669999999
Q ss_pred ----------HHHHHHCCCC--CCCCCCCCC--CCC--C--CCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf ----------9999974985--113426755--565--4--200024781565101102222222102465213568889
Q gi|254780285|r 277 ----------IDNLARQGYV--YEGILPPPK--SKT--T--QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 (586)
Q Consensus 277 ----------i~~l~~~g~~--~e~~~~~~~--~~~--~--~~~~~~~~~~~~~~~~~g~~~d~vl~rsDGt~~Y~t~Di 338 (586)
T Consensus 156 l~~~~~I~~Il~~~~~~~~~~~~~P~~piC~~cGkv~~t~v~~~d~~~~~v~y~~-~cG~---------~~~~~~~-~g~ 224 (513)
T PRK00750 156 LEKYDEIMAILLPTLGEERQATYSPFLPICPKCGKVLQVPVISVDADAGTITYDD-ECGH---------EGEVPVT-GGH 224 (513)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEEEEEECCCCEEEEEC-CCCC---------EEEECCC-CCC
T ss_conf 9859999999998438666787147787618889552046899977998899984-9998---------7876366-885
Q ss_pred HHHHHHHHCCCCCCCC-----CCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 9999975225554333-----67776136899999999972266345115311011012211000001223302456777
Q gi|254780285|r 339 AYFKCKYERGFDNMIY-----VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 (586)
Q Consensus 339 A~~~~k~e~~~d~~iy-----Vv~~~Q~~h~~~v~~~~~~lg~~~~~~~~~~~~~v~l~~dg~~~kmstR~G~~v~l~dl 413 (586)
T Consensus 225 ~KL~WrvDW~mRW~~~~Vd~Ep~GKDh~~S~~~~~~I~~i~g~~pP--~~~~YE~f-Ld~~G--~KmSsSkGngit~~ew 299 (513)
T PRK00750 225 VKLQWKVDWPMRWAALGVDFEPAGKDHISSYDTSSRICEILGGEPP--EGFMYELF-LDGKG--QKISKSKGNGISIEDW 299 (513)
T ss_pred CCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC--CCCCEEEE-ECCCC--CEECCCCCCCCCHHHH
T ss_conf 4346625655441110643034651121207679999998389999--99872279-83798--6630568972389999
Q ss_pred HHHHHHHH-HHHHHHHHCCHHHHHHHH
Q ss_conf 77632112-345554200012333447
Q gi|254780285|r 414 VDEVGSDS-VRFMMLWRKNSELLDFDF 439 (586)
Q Consensus 414 l~evg~~a-iky~~L~~~~~~~~~Fd~ 439 (586)
T Consensus 300 L~~~~PEsl~rfm~~~pkpaK~l~fd~ 326 (513)
T PRK00750 300 LEYAPPESLARFMYARPKPAKRLYFDV 326 (513)
T ss_pred HHHCCHHHHHHHHHHCCCCCCCCCHHH
T ss_conf 975599999999971889884015656