HHsearch alignment for GI: 254780285 and conserved domain: PRK01406

>PRK01406 gltX glutamyl-tRNA synthetase; Reviewed.
Probab=99.34  E-value=2.7e-11  Score=98.22  Aligned_cols=273  Identities=21%  Similarity=0.212  Sum_probs=136.5

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHH--H----HHHHHHHHHHHHHHCCCCCCCCCHHHC
Q ss_conf             3443224411777778568999999998506664102014775314--5----556789875322210245000660110
Q gi|254780285|r  128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ--I----NTLALSVFWRYQQALYNNDSDLPEGYY  201 (586)
Q Consensus       128 sSpNp~KplHVGHlRsaiIGdsi~ril~~~G~~V~r~nyvgD~G~Q--~----~~li~~~~~~~~~~~~~~~~~~~e~~~  201 (586)
T Consensus         7 fAPSPtG~lH~G~~rtal~n~l~a~--~~~g~f~lRi---eDtD~~R~~~~~~~~i~~~l~wlgi~~--------de---   70 (467)
T PRK01406          7 FAPSPTGYLHVGGARTALFNWLFAR--HHGGKFILRI---EDTDLERSTPEAVDAILDGLKWLGLDW--------DE---   70 (467)
T ss_pred             ECCCCCCCCCHHHHHHHHHHHHHHH--HHCCEEEEEE---CCCCCCCCCHHHHHHHHHHHHHCCCCC--------CC---
T ss_conf             5899998422478999999999999--7299699996---879988787799999999999879999--------98---


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHCCHHHHHHHHHHHH
Q ss_conf             24100001278888875764134302379999999789988754555887087521000158873010457999999999
Q gi|254780285|r  202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA  281 (586)
Q Consensus       202 ~~~y~~~~~~e~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~l~i~fD~~~~Es~~~~~~~~~i~~~i~~l~  281 (586)
T Consensus        71 -~p~~QS~r~~~y~~~~~~L~~~g~a-----Y~cfcs~e~l~~~r~~~~~~~~~~-~Y~~~~------r~l~~~~~~~~~  137 (467)
T PRK01406         71 -GPYRQSERFDRYKEVAEQLLEKGKA-----YYCYCTPEELEAMREEQLARGEPP-RYDGRC------RDLTPEEVAARE  137 (467)
T ss_pred             -CCEEHHCCHHHHHHHHHHHHHCCCC-----EECCCCHHHHHHHHHHHHHCCCCC-CCCHHH------HCCCHHHHHHHH
T ss_conf             -8861744899999999999984998-----644778999998699998479998-888555------338987887676


Q ss_pred             HCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC--CCCCC
Q ss_conf             7498511342675556542000247815651011022222221024652135688899999975225554333--67776
Q gi|254780285|r  282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY--VMGSD  359 (586)
Q Consensus       282 ~~g~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~vl~rsDGt~~Y~t~DiA~~~~k~e~~~d~~iy--Vv~~~  359 (586)
T Consensus       138 ~~g~~~viR~k~~~~~~~~~~D~i~G~i~~~~~~~~---D~vi~r~dg~pty~~---a~vvD----D~~m~it~virg~d  207 (467)
T PRK01406        138 AEGRPPVIRFKVPQEGEIVWDDLVRGEIEFSNSELD---DLVILRSDGTPTYNL---AVVVD----DHDMGITHVIRGED  207 (467)
T ss_pred             HCCCCCEEEEECCCCCCEEEEHHHCCCCCCCCCCCC---CEEEEECCCCCEEEE---CCCCC----CCCCCCCEEECCCC
T ss_conf             469982599866888865764030466555755568---816880699833420---20057----62368865403753


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCEEEECCHHHCCCCCCCCCCCCCCCCHHHHHHHHHH-------------HHH-------
Q ss_conf             136899999999972266345115311011012211000001223302456777776-------------321-------
Q gi|254780285|r  360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------VGS-------  419 (586)
Q Consensus       360 Q~~h~~~v~~~~~~lg~~~~~~~~~~~~~v~l~~dg~~~kmstR~G~~v~l~dll~e-------------vg~-------  419 (586)
T Consensus       208 ~~~~t~~~~~l~~~l~~~~p~~~H~pl--i-~~~~g~--kLSKR~~~~-~i~~~~~~GylPeAllNyLa~LGWs~~~~Ei  281 (467)
T PRK01406        208 HLSNTPRQILLYEALGWEVPVFAHLPL--I-LGEDGK--KLSKRHGAT-SVMQYRDMGYLPEALLNYLARLGWSHGDQEI  281 (467)
T ss_pred             CHHHHHHHHHHHHHHCCCCCEEEEEEC--E-ECCCCC--CCCCCCCCC-CHHHHHHCCCCHHHHHHHHHHHCCCCCCCHH
T ss_conf             588899999999983899971673011--1-489998--155668852-1999998599889999999984799984142


Q ss_pred             ----HHHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf             ----12345554200012333447776532
Q gi|254780285|r  420 ----DSVRFMMLWRKNSELLDFDFCKVKEQ  445 (586)
Q Consensus       420 ----~aiky~~L~~~~~~~~~Fd~d~~l~~  445 (586)
T Consensus       282 fsl~eli~~Fdl~~isks~A~FD~~KL~~l  311 (467)
T PRK01406        282 FSLEELIELFDLERVSKSPARFDIEKLEWL  311 (467)
T ss_pred             CCHHHHHHHCCCCCCCCCCCCCCHHHHHHH
T ss_conf             058999973683668788855489999999