HHsearch alignment for GI: 254780285 and conserved domain: PRK01611
>PRK01611 argS arginyl-tRNA synthetase; Reviewed.
Probab=100.00 E-value=0 Score=1095.57 Aligned_cols=545 Identities=40% Similarity=0.614 Sum_probs=477.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEE
Q ss_conf 98689999999999999986048882122452774178801274110489998888289979999999983457897314
Q gi|254780285|r 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80 (586)
Q Consensus 1 M~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~i~ve~p~~~~~GD~~~n~a~~lAK~~kk~P~~iA~~i~~~l~~~~~i~~ 80 (586)
T Consensus 1 ~~~~~~i~~~i~~al~~~~~~~~~~---~~~i~ve~p~~~~~GD~s~n~a~~laK~lk~~P~~iA~~i~~~l~~~~~~~~ 77 (570)
T PRK01611 1 MNLKANLKALLSEALEALLLAGGLA---EPEIQVERPKDPEHGDYATNIAMQLAKKLKKNPREIAEEIVEALDASDLIEK 77 (570)
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCC---CCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEE
T ss_conf 9858999999999999998727999---7776986797898765117999999988698999999999984466688768
Q ss_pred EEEECCCEEEEEECHHHHHHHHHHHHHCCHHCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 88547976878888889999999998562213887656554100022344322441177777856899999999850666
Q gi|254780285|r 81 VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 (586)
Q Consensus 81 vevagpGfIN~~l~~~~~~~~l~~i~~~~~~yG~~~~~~~~kVvVE~sSpNp~KplHVGHlRsaiIGdsi~ril~~~G~~ 160 (586)
T Consensus 78 vevagpGFIN~~l~~~~~~~~l~~i~~~~~~yG~~~~~~~~kv~VEf~S~Np~kplHvGH~R~aiiGdslaril~~~G~~ 157 (570)
T PRK01611 78 VEIAGPGFINFFLDPAALAALVLEILLAGERYGRSDIGKGKKVVVEYVSANPTGPLHVGHLRSAVIGDALARILEFAGYD 157 (570)
T ss_pred EEEECCCEEEEEECHHHHHHHHHHHHHHCHHCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99957975999999999999999999604202877568997799984489999986233588789999999999983990
Q ss_pred CCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHH--HHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 4102014775314555678987532221024500066011024100001--27888887576413430237999999978
Q gi|254780285|r 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV--GKELADKYSSELLNFPEEKWLPIVKDYSV 238 (586)
Q Consensus 161 V~r~nyvgD~G~Q~~~li~~~~~~~~~~~~~~~~~~~e~~~~~~y~~~~--~~e~~~~~~~~~~~~~e~~~~~~~~~~~~ 238 (586)
T Consensus 158 V~r~~yvnD~G~Qi~~l~~~~~~~~~~~~~--~~~-l~~~Y~~~~~~~~~~~~~~~~~~~~~l~~~-~d~~~~~~~~~~~ 233 (570)
T PRK01611 158 VTREYYVNDAGTQIGMLAASLELEEAAAKG--LSD-LERRYREAKKEPDEDPEEYAGEYIVKLAAP-GDEELEELWRKAV 233 (570)
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHCCCCCC--CHH-HHHHHHHHHCCCCCCHHHHHHHHHHHHHCC-CCHHHHHHHHHHH
T ss_conf 799999787427999999999996048887--066-799999985034658545578999998717-9888999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCEECHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHCCC
Q ss_conf 99887545558870875210001588730104579999999997498511342675556542000247815651011022
Q gi|254780285|r 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 (586)
Q Consensus 239 ~~~~~~~~~~l~~l~i~fD~~~~Es~~~~~~~~~i~~~i~~l~~~g~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 318 (586)
T Consensus 234 ~~~l~~~~~~l~~l~I~fD~~~~Es~~~~--~~~i~~v~~~L~~~~~~~e----------------~dGa~~~~~~~~g~ 295 (570)
T PRK01611 234 DISLDEIKEDLDRLGVKFDVFFSESSLYN--DGKVEEVVEDLKEKGLLYE----------------SDGALWVRLTEFGD 295 (570)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCHHHHHH--CCCHHHHHHHHHHCCCEEE----------------CCCCEEEECHHCCC
T ss_conf 99999999999974876442126688985--7744999999986795893----------------18968994211067
Q ss_pred C-CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHCCCCCCC
Q ss_conf 2-222210246521356888999999752255543336777613689999999997226634511531101101221100
Q gi|254780285|r 319 D-VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397 (586)
Q Consensus 319 ~-~d~vl~rsDGt~~Y~t~DiA~~~~k~e~~~d~~iyVv~~~Q~~h~~~v~~~~~~lg~~~~~~~~~~~~~v~l~~dg~~ 397 (586)
T Consensus 296 d~~~~vl~ksDGt~~Y~t~DiAy~~~K~~~~~d~~I~V~g~dq~~hf~~l~~~l~~lG~~~~~~~~l~h~~~~lv~~~~~ 375 (570)
T PRK01611 296 DEKDRVLQKSDGTYTYFTTDIAYHLYKFERGFDRVIYVVGADHHGHFKRLKAALKALGYDPEKLEVLLHQMVGLVRGGEG 375 (570)
T ss_pred CCCCEEEEECCCCCEECHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCC
T ss_conf 77784899159960001468999999985178838999457588899999999998699963344799999875436867
Q ss_pred CCCCCCCCCHHHHHHHHHH----------------------HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf 0001223302456777776----------------------321123455542000123334477765320244367888
Q gi|254780285|r 398 IKMSKRAGDFITLRHVVDE----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455 (586)
Q Consensus 398 ~kmstR~G~~v~l~dll~e----------------------vg~~aiky~~L~~~~~~~~~Fd~d~~l~~~~~nt~~Yiq 455 (586)
T Consensus 376 ~kMStR~G~~v~L~dlldea~~~a~~~~~~~~e~~~~ia~~Vg~~Airy~~L~~~~~~~~~Fd~d~~l~~-~g~t~~YiQ 454 (570)
T PRK01611 376 VKMSTRAGNVVTLDDLLDEAVERARELVEESEEEKEEIAKAVGIDAVRYFDLSRSRDSDYDFDLDLALSF-EGNNPPYVQ 454 (570)
T ss_pred CCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCEECHHHHHHH-CCCCCHHHH
T ss_conf 6442467874589999999999999876337767889997634104026444068888822268998632-389825788
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 88888999987533200246832234223552114998999999998421899999998528127999999999988999
Q gi|254780285|r 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 (586)
Q Consensus 456 Ya~aR~~SIlrKa~~~~~~~~~~~~~~~~~~~~~~~~~~E~~L~~~l~~f~~vi~~a~~~~~P~~l~~Yl~~La~~Fn~f 535 (586)
T Consensus 455 Ya~AR~~SIlrK~~~~~~~~--------~~~~~~l~~~~E~~Li~~l~~fp~vv~~a~~~~~Ph~l~~YL~~La~~Fn~f 526 (570)
T PRK01611 455 YAHARICSILRKAAEEGLAA--------AADLSLLTEEEELELIKKLAEFPEVVESAAEELEPHRIANYLYELAGAFHSF 526 (570)
T ss_pred HHHHHHHHHHHHHHCCCCCC--------CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999998631234544--------3433346998999999999887999999999688189999999999999999
Q ss_pred HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 87068666665435787899999999999999999998731587985445
Q gi|254780285|r 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 (586)
Q Consensus 536 Y~~~~~~~~~~v~~~~~~~~~~~RL~L~~a~~~vL~~~L~LLGI~~perM 585 (586)
T Consensus 527 Y~~~------~vl~~~~~~~~~~RL~L~~a~~~vL~~gL~LLGI~~~erM 570 (570)
T PRK01611 527 YNAC------PVLKEEEEEERNARLALVKATAQVLKNGLDLLGIEAPERM 570 (570)
T ss_pred HHCC------CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 8519------8358999899999999999999999998640398966779