HHsearch alignment for GI: 254780285 and conserved domain: pfam00133
>pfam00133 tRNA-synt_1 tRNA synthetases class I (I, L, M and V). Other tRNA synthetase sub-families are too dissimilar to be included.
Probab=99.43 E-value=2e-11 Score=99.16 Aligned_cols=134 Identities=16% Similarity=0.255 Sum_probs=84.5
Q ss_pred CCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHH
Q ss_conf 54100022344322441177777856899999999850666410201477531455567898753222102450006601
Q gi|254780285|r 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199 (586)
Q Consensus 120 ~~kVvVE~sSpNp~KplHVGHlRsaiIGdsi~ril~~~G~~V~r~nyvgD~G~Q~~~li~~~~~~~~~~~~~~~~~~~e~ 199 (586)
T Consensus 22 k~kf~i~~~pPY~nG~lH~GH~~~~t~~D~~aRy~rm~G~~Vl~p~GwD~~GlPiE~~vek---~~~~----~~~~~~-- 92 (606)
T pfam00133 22 KPSFTIHDGPPNATGLLHIGHALNKTLKDIVIRYKRMQGFDVLWVPGWDHHGLPTEQKVEK---KLGI----KGKKDR-- 92 (606)
T ss_pred CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH---HHHH----CCCCCH--
T ss_conf 9958997089897885024266878999999999982899779988456143999999999---7421----159983--
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE----ECHHHHHHCCHHHHHH
Q ss_conf 102410000127888887576413430237999999978998875455588708752100----0158873010457999
Q gi|254780285|r 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF----ISEDDFHRGDPSPIRD 275 (586)
Q Consensus 200 ~~~~~y~~~~~~e~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~l~i~fD~~----~~Es~~~~~~~~~i~~ 275 (586)
T Consensus 93 -------~---------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lG~~~DW~r~~~T~dp~y----~~~~~w 145 (606)
T pfam00133 93 -------H---------------KLGREKFREKCREW-KMEYADEIRSQFKRLGVSGDWDREYFTLDPGL----EAAVWR 145 (606)
T ss_pred -------H---------------HCCHHHHHHHHHHH-HHHHHHHHHHHHHHHCCEEECCCCCCCCCHHH----HHHHHH
T ss_conf -------6---------------57999999999999-99999999999998291264588725278125----499999
Q ss_pred HHHHHHHCCCCCCC
Q ss_conf 99999974985113
Q gi|254780285|r 276 IIDNLARQGYVYEG 289 (586)
Q Consensus 276 ~i~~l~~~g~~~e~ 289 (586)
T Consensus 146 ~F~~L~~~Gliyr~ 159 (606)
T pfam00133 146 VFVRLHDKGLIYRG 159 (606)
T ss_pred HHHHHHHCCCCEEE
T ss_conf 99999977981775