HHsearch alignment for GI: 254780285 and conserved domain: pfam00750
>pfam00750 tRNA-synt_1d tRNA synthetases class I (R). Other tRNA synthetase sub-families are too dissimilar to be included. This family includes only arginyl tRNA synthetase.
Probab=100.00 E-value=0 Score=591.88 Aligned_cols=314 Identities=32% Similarity=0.497 Sum_probs=266.9
Q ss_pred HHHHHHCCHHCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHH
Q ss_conf 99998562213887656554100022344322441177777856899999999850666410201477531455567898
Q gi|254780285|r 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 (586)
Q Consensus 102 l~~i~~~~~~yG~~~~~~~~kVvVE~sSpNp~KplHVGHlRsaiIGdsi~ril~~~G~~V~r~nyvgD~G~Q~~~li~~~ 181 (586)
T Consensus 2 ~~~~~~~-~~~g~~~-~k~kkI~vE~~S~Np~kplHvGHlR~aiiGdslarll~~~G~~V~r~~yvnD~G~Qi~~l~~~~ 79 (345)
T pfam00750 2 VTKILAQ-GGLGSAL-LENKKVVVEFSSPNPAKPIHVGHLRSTIIGDALSRLLEFLGYDVVRENYVGDWGTQFGMLIASL 79 (345)
T ss_pred HHHHHCC-CCCCCCC-CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHH
T ss_conf 6777327-6679877-8998899985389999885041015279999999999987995989987686489999999999
Q ss_pred HHHHHHHCCCC-CCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
Q ss_conf 75322210245-00066011024100001278888875764134302379999999789988754555887087521000
Q gi|254780285|r 182 FWRYQQALYNN-DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 (586)
Q Consensus 182 ~~~~~~~~~~~-~~~~~e~~~~~~y~~~~~~e~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~l~i~fD~~~ 260 (586)
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~Y~~~~~~~~~~~~~~~~~~~~~~~le~~d~~~-~~~~~~~~~~~~~~~l~~l~v~fD~~~ 158 (345)
T pfam00750 80 EAAAKEELTVPMPIQDLEDGYRGIKKDYIAEEIFAKEARNAVVLLQSGDEEF-REMWVLLIFDHIKQSLNKIYDDFDVTL 158 (345)
T ss_pred HHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHCCCHHH-HHHHHHHHHHHHHHHHHHHCCHHCCCC
T ss_conf 9856665455665056666421566888868999985899874500147999-999999999999999999640537671
Q ss_pred CHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 15887301045799999999974985113426755565420002478156510110222222210246521356888999
Q gi|254780285|r 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340 (586)
Q Consensus 261 ~Es~~~~~~~~~i~~~i~~l~~~g~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~vl~rsDGt~~Y~t~DiA~ 340 (586)
T Consensus 159 ~Ese~~~--~~~v~~vl~~L~~~g~~~e----------------~dGA~~~~~~~~gd~~~~vl~rsDGt~~Y~t~DiAy 220 (345)
T pfam00750 159 HEGESVY--KGRMNDAVKDLKDNGLVYE----------------NDGALWLFLTEFGDDKDRVVIKSDGGALYITTDLAY 220 (345)
T ss_pred CHHHHHH--CCHHHHHHHHHHHCCCEEE----------------ECCCEEEECCCCCCCCCCEEEECCCCEEECHHHHHH
T ss_conf 0678884--4509999999987798897----------------489879942434787774478159950002468999
Q ss_pred HHHHHH-CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC--CCEEEECCHHHCCCCCCCCCCCCCCCCHHHHHHHHHH-
Q ss_conf 999752-255543336777613689999999997226634--5115311011012211000001223302456777776-
Q gi|254780285|r 341 FKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA--QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416 (586)
Q Consensus 341 ~~~k~e-~~~d~~iyVv~~~Q~~h~~~v~~~~~~lg~~~~--~~~~~~~~~v~l~~dg~~~kmstR~G~~v~l~dll~e- 416 (586)
T Consensus 221 ~~~K~~~~~~D~~I~V~g~dq~~h~~~l~~~l~~lg~~~~~~~~~h~~~g~v-~~~dgk--kMStR~G~~v~l~dLl~ea 297 (345)
T pfam00750 221 AKERLEQRGFDLIIYVLGADQHGHIQRLFAAAAALGYDPESVEVLHIGFGVV-LGKDGK--RMSTRAGNVVTLDDLLDEA 297 (345)
T ss_pred HHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEE-ECCCCC--CCCCCCCCEEEHHHHHHHH
T ss_conf 9999872599868886474275699999999998599942361789999738-768996--1677887757899999999
Q ss_pred -------------------------HHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf -------------------------32112345554200012333447
Q gi|254780285|r 417 -------------------------VGSDSVRFMMLWRKNSELLDFDF 439 (586)
Q Consensus 417 -------------------------vg~~aiky~~L~~~~~~~~~Fd~ 439 (586)
T Consensus 298 ~~~a~~~~~~~~~~~~~~~~~ia~~Vgi~Airy~~L~~~~~k~i~FDl 345 (345)
T pfam00750 298 LERAMDIKEKNRDLTADELEAVATAIGVDAARYADLSSNRDTDYIFDL 345 (345)
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 999999997366898778999998770767659998658898983589