HHsearch results for GI: 254780285 and protein with PDBid: 1nzj_A
>1nzj_A Hypothetical protein YADB; Zn cluster, glutamyl T-RNA synthetase, structural genomics, unknown function; 1.50A {Escherichia coli} SCOP: c.26.1.1 PDB: 2zlz_A*
Probab=99.25 E-value=9e-11 Score=92.98 Aligned_cols=200 Identities=19% Similarity=0.185 Sum_probs=111.3
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCC
Q ss_conf 02234432244117777785689999999985066641020147753145556789875322210245000660110241
Q gi|254780285|r 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204 (586)
Q Consensus 125 VE~sSpNp~KplHVGHlRsaiIGdsi~ril~~~G~~V~r~nyvgD~G~Q~~~li~~~~~~~~~~~~~~~~~~~e~~~~~~ 204 (586)
|==.-|+|+|+||+||+|++++..-.||- +-|.=+.| .+|.+. +..
T Consensus 7 ~tRfAPsPtG~lHlG~artal~n~l~Ar~--~~G~~iLR---------------------------ieDtD~-~R~---- 52 (298)
T 1nzj_A 7 IGRFAPSPSGELHFGSLIAALGSYLQARA--RQGRWLVR---------------------------IEDIDP-PRE---- 52 (298)
T ss_dssp EEEECCCTTSCCCHHHHHHHHHHHHHHHH--TTCEEEEE---------------------------ECCSCG-GGS----
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHHHH--CCCEEEEE---------------------------ECCCCC-CCC----
T ss_conf 68679598985208999999999999998--09989998---------------------------687997-758----
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-EECHHHHHHCCHHHHHHHHHHHHHC
Q ss_conf 000012788888757641343023799999997899887545558870875210-0015887301045799999999974
Q gi|254780285|r 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI-FISEDDFHRGDPSPIRDIIDNLARQ 283 (586)
Q Consensus 205 y~~~~~~e~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~l~~l~i~fD~-~~~Es~~~~~~~~~i~~~i~~l~~~ 283 (586)
+....+.+.++|+.||+.+|. ....|+. .....+++++|.++
T Consensus 53 ---------------------------------~~~~~~~I~~dL~wLgl~~d~~~~~QS~r----~~~y~~~~~~L~~~ 95 (298)
T 1nzj_A 53 ---------------------------------VPGAAETILRQLEHYGLHWDGDVLWQSQR----HDAYREALAWLHEQ 95 (298)
T ss_dssp ---------------------------------CTTHHHHHHHHHHHTTCCCSSCCEEGGGC----HHHHHHHHHHHHHT
T ss_pred ---------------------------------CHHHHHHHHHHHHHCCCCCCCCCCCHHHH----HHHHHHHHHHHHHC
T ss_conf ---------------------------------76899999999874466677643326768----99999999999977
Q ss_pred CCCCCCCCCCC---------CC----------CCCCCCCCC----------CCCEEEEHHHCCCCCCCCCCCCCCCHHHH
Q ss_conf 98511342675---------55----------654200024----------78156510110222222210246521356
Q gi|254780285|r 284 GYVYEGILPPP---------KS----------KTTQKCDMD----------RKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334 (586)
Q Consensus 284 g~~~e~~~~~~---------~~----------~~~~~~~~~----------~~~~~~~~~~~g~~~d~vl~rsDGt~~Y~ 334 (586)
|++|.-..... .. ......... .+...+.... ...|.|+.|+||.++|
T Consensus 96 G~aY~C~csr~~l~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~vi~r~Dg~ptY- 172 (298)
T 1nzj_A 96 GLSYYCTCTRARIQSIGGIYDGHCRVLHHGPDNAAVRIRQQHPVTQFTDQLRGIIHADEKL--AREDFIIHRRDGLFAY- 172 (298)
T ss_dssp TCEEEECCCHHHHHHTTSSCCCTTTTTCCCSTTCEEEECCSSCCCEEEETTTEEEECCHHH--HHSCCEEECTTSCBCH-
T ss_pred CCEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCHHHEEECCCCCEEEEECCCCCEEECCCC--CCCCEEEECCCCCCCE-
T ss_conf 9822502558888763023333332233455322210205786216744221636631333--4464124657786311-
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHCCCCCCCCCCCCCCCCH
Q ss_conf 8889999997522555433367776136899999999972266345115311011012211000001223302
Q gi|254780285|r 335 AADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407 (586)
Q Consensus 335 t~DiA~~~~k~e~~~d~~iyVv~~~Q~~h~~~v~~~~~~lg~~~~~~~~~~~~~v~l~~dg~~~kmstR~G~~ 407 (586)
++|...+=..-+...+| -|.|+-....+=..+.+.||++.+.+.|+.. + +..+|+ |||+|.|..
T Consensus 173 --~lA~vVDD~~~gIThVi--RG~Dl~~st~~Q~~L~~aLg~~~P~y~H~pl--i-~~~~G~--KLSKr~~a~ 236 (298)
T 1nzj_A 173 --NLAVVVDDHFQGVTEIV--RGADLIEPTVRQISLYQLFGWKVPDYIHLPL--A-LNPQGA--KLSKQNHAP 236 (298)
T ss_dssp --HHHHHHHHHHTTCCEEE--EEGGGHHHHHHHHHHHHHHTCCCCEEEEECB--C-CC---------------
T ss_pred --EECHHCCCCCCCCCEEE--ECCCCCCCCHHHHHHHHHHCCCCCCEEEEEE--E-ECCCCC--CCCCCCCHH
T ss_conf --22201154326997896--4886665768899999973899985498672--5-778998--567768711