HHsearch results for GI: 254780285 and protein with PDBid: 1wkb_A
>1wkb_A Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, editing, amino acid, aminoacylation, trnaLeu, structural genomics; 2.05A {Pyrococcus horikoshii}
Probab=99.53 E-value=4.7e-10 Score=87.98 Aligned_cols=129 Identities=15% Similarity=0.198 Sum_probs=85.4
Q ss_pred EEECCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 53110110122110000012233024567777763211234555420-00123334477765320244367888888889
Q gi|254780285|r 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR-KNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461 (586)
Q Consensus 383 ~~~~~~v~l~~dg~~~kmstR~G~~v~l~dll~evg~~aiky~~L~~-~~~~~~~Fd~d~~l~~~~~nt~~YiqYa~aR~ 461 (586)
++..+++. .+|+ |||+.+||+|...+++++-|.+++|+.+++. ....++.|+.+.+... .+ ...|+
T Consensus 638 v~~~g~~~--~~G~--KMSKS~GNvidp~~ii~~yGaD~lRl~l~~~~~~~~d~~~~~~~i~~~--~~-------~l~~~ 704 (810)
T 1wkb_A 638 IAVNGFGT--LEGQ--KMSKSKGNVLNFIDAIEENGADVVRLYIMSLAEHDSDFDWRRKEVGKL--RK-------QIERF 704 (810)
T ss_dssp EEEECCEE--ETTB--CCCTTTTCCCBHHHHHHHHCHHHHHHHHHHHCCTTCCEEECHHHHHHH--HH-------HHHHH
T ss_pred EEEEEECC--CCCE--ECCCCCCCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHHHH--HH-------HHHHH
T ss_conf 13444305--6761--489988887997999987190999999981498668877789999999--99-------99999
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHH
Q ss_conf 999875332002468322342235521149989999999984218999999985281279999999-9998899987
Q gi|254780285|r 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD-LASVFHGHWS 537 (586)
Q Consensus 462 ~SIlrKa~~~~~~~~~~~~~~~~~~~~~~~~~~E~~L~~~l~~f~~vi~~a~~~~~P~~l~~Yl~~-La~~Fn~fY~ 537 (586)
.+++.+..+... .......+.++.++..+.++-..+.++.+++..+..+..++. +...++ +|-
T Consensus 705 ~~~~~~~~~~~~------------~~~~~~~~~D~~il~~l~~~i~~v~~~~~~~~~~~a~~~~~~~~~~~~~-~y~ 768 (810)
T 1wkb_A 705 YELISQFAEYEV------------KGNVELKDIDRWMLHRLNKAIKETTNALEEFRTRTAVQWAFYSIMNDLR-WYL 768 (810)
T ss_dssp HHHHHHHHTCCC------------CSCCCCCHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHTHHHHHHHH-HHH
T ss_pred HHHHHHHHHCCC------------CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-HHH
T ss_conf 999998753566------------8887878899999999999999999999875988999999999999879-999