HHsearch results for GI: 254780285 and protein with PDBid: 1wz2_A
>1wz2_A Leucyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase/RNA complex; 3.21A {Pyrococcus horikoshii OT3}
Probab=99.49 E-value=2.8e-10 Score=89.54 Aligned_cols=121 Identities=16% Similarity=0.219 Sum_probs=77.5
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 110000012233024567777763211234555420-0012333447776532024436788888888999987533200
Q gi|254780285|r 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR-KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 (586)
Q Consensus 394 dg~~~kmstR~G~~v~l~dll~evg~~aiky~~L~~-~~~~~~~Fd~d~~l~~~~~nt~~YiqYa~aR~~SIlrKa~~~~ 472 (586)
+|+ |||+.+||+|..++++++-|.+++|+++++. ....++.|+.+.+... .+. ++ |+-.++....+.
T Consensus 647 ~G~--KMSKSkGNvvdP~~ii~~yGAD~lRl~l~~~~~~~~d~~~~~~~i~~~--~~~---l~----~~~~~~~~~~~~- 714 (967)
T 1wz2_A 647 EGQ--KMSKSKGNVLNFIDAIEENGADVVRLYIMSLAEHDSDFDWRRKEVGKL--RKQ---IE----RFYELISQFAEY- 714 (967)
T ss_dssp SSS--CCCTTTCCCCBHHHHHHTTCHHHHHHHHHHHCCTTCCEEECHHHHHHH--HHH---HH----HHHHHHHHHHSS-
T ss_pred CCC--CCCCCCCCCCCHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHH--HHH---HH----HHHHHHHHHHHC-
T ss_conf 673--336668886547789874199877899853699775146665788888--999---99----999999876530-
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 24683223422355211499899999999842189999999852812799999999998899987
Q gi|254780285|r 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 (586)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~E~~L~~~l~~f~~vi~~a~~~~~P~~l~~Yl~~La~~Fn~fY~ 537 (586)
+ ........+.++.++..+.++-.-+.++++++..+..+..++.......++|-
T Consensus 715 ---~--------~~~~~~~~~~D~~il~~l~~~i~~v~~~~~~~~~~~a~~~~~~~~~~~~~~y~ 768 (967)
T 1wz2_A 715 ---E--------VKGNVELKDIDRWMLHRLNKAIKETTNALEEFRTRTAVQWAFYSIMNDLRWYL 768 (967)
T ss_dssp ---C--------CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHTHHHHHHHHHHH
T ss_pred ---C--------CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf ---3--------44665577889999999999999999999985142699999999999889999