HHsearch results for GI: 254780285 and protein with PDBid: 2cfo_A
>2cfo_A Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, ATP-binding, nucleotide- binding, protein biosynthesis; HET: GLU; 2.45A {Synechococcus elongatus}
Probab=98.93 E-value=1.4e-08 Score=77.63 Aligned_cols=152 Identities=18% Similarity=0.198 Sum_probs=81.0
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHCCCCCCCCCC-----CCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 974985113426755565420002478156510110222222210-----246521356888999999752255543336
Q gi|254780285|r 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-----KSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 (586)
Q Consensus 281 ~~~g~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~vl~-----rsDGt~~Y~t~DiA~~~~k~e~~~d~~iyV 355 (586)
..+|..+--.+..+........+.-.+.+.+......+ |.++. |+||++|| ++|...+=..-+...+ |
T Consensus 136 ~~~g~~~~~R~k~~~~~~~~~~D~v~g~~~~~~~~~~~--d~ii~~~~~~~~dg~ptY---~~a~~vDD~~~~ithv--i 208 (492)
T 2cfo_A 136 EAAGRTPVIRFKIEDDRQIEWQDLVRGRVSWQGADLGG--DMVIARAAPRGEIGYPLY---NLVVVVDDIAMGITDV--I 208 (492)
T ss_dssp HHTTCCCEEEECCCTTCEEEEEETTTEEEEEEGGGGCS--SEEEECSCCTTSCCCBCH---HHHHHHHHHHTTCSEE--E
T ss_pred HHCCCCEEEEEECCCCCCEEEECCEEEEEEEECCCCCC--CEEEEECCCCCCCCCCHH---HHHHHHCCCCCCCCEE--E
T ss_conf 65599806999737888535653300057641002579--734640457677775327---7544406755676778--7
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHCCCCCCCCCCCCCCCCHHHHHHHHHH-------------HHH---
Q ss_conf 7776136899999999972266345115311011012211000001223302456777776-------------321---
Q gi|254780285|r 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------VGS--- 419 (586)
Q Consensus 356 v~~~Q~~h~~~v~~~~~~lg~~~~~~~~~~~~~v~l~~dg~~~kmstR~G~~v~l~dll~e-------------vg~--- 419 (586)
=|.|+-.....=..+.+.+|++.+.+.|+.. + +..+|+ |||+|.|. .++.++-++ +|-
T Consensus 209 Rg~d~~~~t~~~~~~~~~l~~~~p~~~h~pl--l-~~~~g~--klSKr~~~-~~v~~~r~~G~~peAl~NyLa~LGws~~ 282 (492)
T 2cfo_A 209 RGEDHIGNTPKQILLYEALGATPPNFAHTPL--I-LNSTGQ--KLSKRDGV-TSISDFRAMGYLAPALANYMTLLGWSPP 282 (492)
T ss_dssp EEGGGTTHHHHHHHHHHHTTCCCCEEEEECC--E-ECSSSS--BCCTTSSC-CBHHHHHHTTCCHHHHHHHHHHTTBCCC
T ss_pred CCCCCCCCCCHHHHHHHHHCCCCCCEEEHHH--H-CCCCCC--CCCCCCCC-CCHHHHHHCCCCCHHHHHHHHHHCCCCC
T ss_conf 3520125534999998752579983653746--3-166787--32323897-5477787679980899999999489998
Q ss_pred ----------HHHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf ----------12345554200012333447776532
Q gi|254780285|r 420 ----------DSVRFMMLWRKNSELLDFDFCKVKEQ 445 (586)
Q Consensus 420 ----------~aiky~~L~~~~~~~~~Fd~d~~l~~ 445 (586)
..++.|+++.-..+.-.||++++...
T Consensus 283 ~~~~Eifsleeli~~Fdl~~i~ks~A~FD~~KL~~i 318 (492)
T 2cfo_A 283 EGVGELFTLDLAAKHFSFERINKAGARFDWDKLNWL 318 (492)
T ss_dssp TTTCSCCCHHHHHHHCCSTTBCSSCEECCHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHH
T ss_conf 886512558999999998504655443589999999