HHsearch results for GI: 254780285 and protein with PDBid: 2cyc_A
>2cyc_A Tyrosyl-tRNA synthetase; tyrosine, tyrrs, aminoacylation, structural genomics, NPPSFA; HET: TYR; 2.20A {Pyrococcus horikoshii OT3}
Probab=93.77 E-value=0.33 Score=25.91 Aligned_cols=85 Identities=16% Similarity=0.067 Sum_probs=48.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-------CEEEECCHH-HCCC-----
Q ss_conf 465213568889999997522555433367776136899999999972266345-------115311011-0122-----
Q gi|254780285|r 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-------INVLLCELV-RLYR----- 393 (586)
Q Consensus 327 sDGt~~Y~t~DiA~~~~k~e~~~d~~iyVv~~~Q~~h~~~v~~~~~~lg~~~~~-------~~~~~~~~v-~l~~----- 393 (586)
+=|..+|...-.|-+.. ++-.+-.+|.||..|+.....++..+++.... ....+..++ .|..
T Consensus 162 ~~g~~~YP~lQaaDil~-----~~~~~vpvG~DQ~~~~~l~rdia~k~n~~~~~~~~~~~~~~~~~~~~l~gL~~~~~~~ 236 (375)
T 2cyc_A 162 DFAKLIYPMMQVADIFY-----QGVTIAHAGMDQRKAHVIAIEVAQKLRYHPIVHEGEKLKPVAVHHHLLLGLQEPPKWP 236 (375)
T ss_dssp BTHHHHHHHHHHHHHHH-----TTCSEEEEEGGGHHHHHHHHHHGGGCSSSCEEETTEEECCEEEEECCCBCSSCCSSSS
T ss_pred CCCEECCCHHHHHHHHH-----HHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCC
T ss_conf 40100131265667988-----6302255552025899999999998388766555665531221144555766643233
Q ss_pred ----------CCCCCCCCCCCC-CHHHHHHHHHHH
Q ss_conf ----------110000012233-024567777763
Q gi|254780285|r 394 ----------DGMPIKMSKRAG-DFITLRHVVDEV 417 (586)
Q Consensus 394 ----------dg~~~kmstR~G-~~v~l~dll~ev 417 (586)
+| ..|||+-.+ +.|.+.|--++|
T Consensus 237 ~~~~~~~~~~~~-~~KMSkS~~~s~I~L~Dtpe~I 270 (375)
T 2cyc_A 237 IESEEEFKEIKA-QMKMSKSKPYSAVFIHDSPEEI 270 (375)
T ss_dssp CCSHHHHHHHHH-HHBGGGSCGGGSCBTTCCHHHH
T ss_pred CCCCCCCCCCCC-CCCCCCCCCCCEEEECCCHHHH
T ss_conf 322223456667-7767668988867611899999