HHsearch results for GI: 254780285 and protein with PDBid: 2o5r_A

>2o5r_A Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, glutamate- tRNA ligase 1, glurs 1, structural genomics; 2.34A {Thermotoga maritima}
Probab=99.40  E-value=2.1e-11  Score=97.43  Aligned_cols=278  Identities=21%  Similarity=0.237  Sum_probs=135.6

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHH--HH----HHHHHHHHHHHHHCCCCCCCCCHHH
Q ss_conf             23443224411777778568999999998506664102014775314--55----5678987532221024500066011
Q gi|254780285|r  127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ--IN----TLALSVFWRYQQALYNNDSDLPEGY  200 (586)
Q Consensus       127 ~sSpNp~KplHVGHlRsaiIGdsi~ril~~~G~~V~r~nyvgD~G~Q--~~----~li~~~~~~~~~~~~~~~~~~~e~~  200 (586)
                      =.-|.|||+||+||+|+|++-.-+||-.  -|-=+.|   |.|.-..  ..    .+...+.|...+  .++.+..+ +.
T Consensus        17 RfAPsPtG~lHiG~~rtal~n~~~Ak~~--~G~~iLR---ieDTD~~R~~~~~~~~I~~~L~wlGl~--~De~p~~~-~~   88 (481)
T 2o5r_A           17 RFAPSPTGFLHVGGARTALFNFLFARKE--KGKFILR---IEDTDLERSEREYEEKLMESLRWLGLL--WDEGPDVG-GD   88 (481)
T ss_dssp             EECCCCCSCCBHHHHHHHHHHHHHHHHH--TCEEEEC---BCCSSCCSGGGHHHHHHHHHHHHHTCC--CSBBTTTB-CT
T ss_pred             ECCCCCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEE---ECCCCCCCCCHHHHHHHHHHHHHCCCC--CCCCCCCC-CC
T ss_conf             6087989742089999999999999984--9989998---687898758879999999999976998--77687778-89


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHCCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHCCHHHH
Q ss_conf             0241000012788888757641343-------023799999997899887545558870875210001588730104579
Q gi|254780285|r  201 YPGVYLKHVGKELADKYSSELLNFP-------EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI  273 (586)
Q Consensus       201 ~~~~y~~~~~~e~~~~~~~~~~~~~-------e~~~~~~~~~~~~~~~~~~~~~~l~~l~i~fD~~~~Es~~~~~~~~~i  273 (586)
                       .+.|......+.+.++..++.+..       .++.+...+.    ...+      ......++.-..+.      . ..
T Consensus        89 -~~~~~QS~r~~~y~~~~~~Li~~G~aY~C~cs~eel~~~r~----~~~~------~~~~~~y~~~~~~~------~-~~  150 (481)
T 2o5r_A           89 -HGPYRQSERVEIYREHAERLVKEGKAYYVYAYPEEIEEMRE----KLLS------EGKAPHYSQEMFEK------F-DT  150 (481)
T ss_dssp             -TCCCBGGGGHHHHHHHHHHHHHTTSEEEECCCSTTTHHHHH----HHHH------TTCCCCBCGGGGTT------T-CC
T ss_pred             -CCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH----HHHC------CCCCCCCCCHHHHC------C-CC
T ss_conf             -88740986899999999999876996612331777756665----5420------35687766034422------4-44


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             99999999749851134267555654200024781565101102222222102465213568889999997522555433
Q gi|254780285|r  274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI  353 (586)
Q Consensus       274 ~~~i~~l~~~g~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~vl~rsDGt~~Y~t~DiA~~~~k~e~~~d~~i  353 (586)
                      ..........+.........+ .......+.-.+.+.+.....+   |.||.|+||.+||   ++|...+=..-+...+ 
T Consensus       151 ~~~~~~~~~~~~~~~~r~~~~-~~~~~~~D~i~G~i~~~~~~~~---D~Vi~R~Dg~PtY---~fa~vvDD~~~~ithv-  222 (481)
T 2o5r_A          151 PERRREYEEKGLRPAVFFKMP-RKDYVLNDVVKGEVVFKTGAIG---DFVIMRSNGLPTY---NFACVVDDMLMEITHV-  222 (481)
T ss_dssp             HHHHHHHHHTTCCCEEEECCC-SSCEEEEETTTEEEEECTTSSC---BEEEECTTSCBCH---HHHHHHHHHHTTCSEE-
T ss_pred             HHHHHHHHHCCCCCEEEECCC-CCCCEEECCCCCEEECCCCCCC---CEEEEECCCCCCE---EEEEEECCCCCCCCEE-
T ss_conf             233212233166603663167-6673111021442422665679---9789914787102---2200306755685643-


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHCCCCCCCCCCCCCCCCHHHHHHHHHH-------------HHH-
Q ss_conf             367776136899999999972266345115311011012211000001223302456777776-------------321-
Q gi|254780285|r  354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------VGS-  419 (586)
Q Consensus       354 yVv~~~Q~~h~~~v~~~~~~lg~~~~~~~~~~~~~v~l~~dg~~~kmstR~G~~v~l~dll~e-------------vg~-  419 (586)
                       |=|.|+-.-..+-..+.+.+|++.+.+.|+..  + +..||+  |||+|.|. +.+.++.++             +|- 
T Consensus       223 -irg~d~~~~t~~~~~~~~~l~~~~p~~~h~~~--i-~~~dg~--KLSKR~g~-~si~~~r~~G~~p~Al~NyL~~LGws  295 (481)
T 2o5r_A          223 -IRGDDHLSNTLRQLALYEAFEKAPPVFAHVST--I-LGPDGK--KLSKRHGA-TSVEAFRDMGYLPEALVNYLALLGWS  295 (481)
T ss_dssp             -EEEGGGHHHHHHHHHHHHHTTCCCCEEEEECC--E-ECTTSS--BCCGGGSC-CBHHHHHHHTCCHHHHHHHHHTSSBC
T ss_pred             -ECCCCHHHHHHHHHHHHHHHCCCCCEEEECHH--H-CCCCCC--CCCCCCCC-CCHHHHHHCCCCHHHHHHHHHHHCCC
T ss_conf             -15630456359999999984759983895054--4-089989--75664797-58999998799889999999994799


Q ss_pred             -----------HHHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf             -----------12345554200012333447776532
Q gi|254780285|r  420 -----------DSVRFMMLWRKNSELLDFDFCKVKEQ  445 (586)
Q Consensus       420 -----------~aiky~~L~~~~~~~~~Fd~d~~l~~  445 (586)
                                 ..++.|+|+.=..+.-.||++++...
T Consensus       296 ~~~~~Ei~sl~eli~~Fdl~~iskS~A~FD~~KL~wi  332 (481)
T 2o5r_A          296 HPEGKELLTLEELISSFSLDRLSPNPAIFDPQKLKWM  332 (481)
T ss_dssp             CTTCCCCCCHHHHHHHCCGGGBCSSCEECCHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHH
T ss_conf             9976367799999987171457888643669999999