HHsearch results for GI: 254780285 and protein with PDBid: 2o5r_A
>2o5r_A Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, glutamate- tRNA ligase 1, glurs 1, structural genomics; 2.34A {Thermotoga maritima}
Probab=99.40 E-value=2.1e-11 Score=97.43 Aligned_cols=278 Identities=21% Similarity=0.237 Sum_probs=135.6
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHH--HH----HHHHHHHHHHHHHCCCCCCCCCHHH
Q ss_conf 23443224411777778568999999998506664102014775314--55----5678987532221024500066011
Q gi|254780285|r 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ--IN----TLALSVFWRYQQALYNNDSDLPEGY 200 (586)
Q Consensus 127 ~sSpNp~KplHVGHlRsaiIGdsi~ril~~~G~~V~r~nyvgD~G~Q--~~----~li~~~~~~~~~~~~~~~~~~~e~~ 200 (586)
=.-|.|||+||+||+|+|++-.-+||-. -|-=+.| |.|.-.. .. .+...+.|...+ .++.+..+ +.
T Consensus 17 RfAPsPtG~lHiG~~rtal~n~~~Ak~~--~G~~iLR---ieDTD~~R~~~~~~~~I~~~L~wlGl~--~De~p~~~-~~ 88 (481)
T 2o5r_A 17 RFAPSPTGFLHVGGARTALFNFLFARKE--KGKFILR---IEDTDLERSEREYEEKLMESLRWLGLL--WDEGPDVG-GD 88 (481)
T ss_dssp EECCCCCSCCBHHHHHHHHHHHHHHHHH--TCEEEEC---BCCSSCCSGGGHHHHHHHHHHHHHTCC--CSBBTTTB-CT
T ss_pred ECCCCCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEE---ECCCCCCCCCHHHHHHHHHHHHHCCCC--CCCCCCCC-CC
T ss_conf 6087989742089999999999999984--9989998---687898758879999999999976998--77687778-89
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHCCHHHH
Q ss_conf 0241000012788888757641343-------023799999997899887545558870875210001588730104579
Q gi|254780285|r 201 YPGVYLKHVGKELADKYSSELLNFP-------EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273 (586)
Q Consensus 201 ~~~~y~~~~~~e~~~~~~~~~~~~~-------e~~~~~~~~~~~~~~~~~~~~~~l~~l~i~fD~~~~Es~~~~~~~~~i 273 (586)
.+.|......+.+.++..++.+.. .++.+...+. ...+ ......++.-..+. . ..
T Consensus 89 -~~~~~QS~r~~~y~~~~~~Li~~G~aY~C~cs~eel~~~r~----~~~~------~~~~~~y~~~~~~~------~-~~ 150 (481)
T 2o5r_A 89 -HGPYRQSERVEIYREHAERLVKEGKAYYVYAYPEEIEEMRE----KLLS------EGKAPHYSQEMFEK------F-DT 150 (481)
T ss_dssp -TCCCBGGGGHHHHHHHHHHHHHTTSEEEECCCSTTTHHHHH----HHHH------TTCCCCBCGGGGTT------T-CC
T ss_pred -CCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH----HHHC------CCCCCCCCCHHHHC------C-CC
T ss_conf -88740986899999999999876996612331777756665----5420------35687766034422------4-44
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999749851134267555654200024781565101102222222102465213568889999997522555433
Q gi|254780285|r 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353 (586)
Q Consensus 274 ~~~i~~l~~~g~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~vl~rsDGt~~Y~t~DiA~~~~k~e~~~d~~i 353 (586)
..........+.........+ .......+.-.+.+.+.....+ |.||.|+||.+|| ++|...+=..-+...+
T Consensus 151 ~~~~~~~~~~~~~~~~r~~~~-~~~~~~~D~i~G~i~~~~~~~~---D~Vi~R~Dg~PtY---~fa~vvDD~~~~ithv- 222 (481)
T 2o5r_A 151 PERRREYEEKGLRPAVFFKMP-RKDYVLNDVVKGEVVFKTGAIG---DFVIMRSNGLPTY---NFACVVDDMLMEITHV- 222 (481)
T ss_dssp HHHHHHHHHTTCCCEEEECCC-SSCEEEEETTTEEEEECTTSSC---BEEEECTTSCBCH---HHHHHHHHHHTTCSEE-
T ss_pred HHHHHHHHHCCCCCEEEECCC-CCCCEEECCCCCEEECCCCCCC---CEEEEECCCCCCE---EEEEEECCCCCCCCEE-
T ss_conf 233212233166603663167-6673111021442422665679---9789914787102---2200306755685643-
Q ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHCCCCCCCCCCCCCCCCHHHHHHHHHH-------------HHH-
Q ss_conf 367776136899999999972266345115311011012211000001223302456777776-------------321-
Q gi|254780285|r 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------VGS- 419 (586)
Q Consensus 354 yVv~~~Q~~h~~~v~~~~~~lg~~~~~~~~~~~~~v~l~~dg~~~kmstR~G~~v~l~dll~e-------------vg~- 419 (586)
|=|.|+-.-..+-..+.+.+|++.+.+.|+.. + +..||+ |||+|.|. +.+.++.++ +|-
T Consensus 223 -irg~d~~~~t~~~~~~~~~l~~~~p~~~h~~~--i-~~~dg~--KLSKR~g~-~si~~~r~~G~~p~Al~NyL~~LGws 295 (481)
T 2o5r_A 223 -IRGDDHLSNTLRQLALYEAFEKAPPVFAHVST--I-LGPDGK--KLSKRHGA-TSVEAFRDMGYLPEALVNYLALLGWS 295 (481)
T ss_dssp -EEEGGGHHHHHHHHHHHHHTTCCCCEEEEECC--E-ECTTSS--BCCGGGSC-CBHHHHHHHTCCHHHHHHHHHTSSBC
T ss_pred -ECCCCHHHHHHHHHHHHHHHCCCCCEEEECHH--H-CCCCCC--CCCCCCCC-CCHHHHHHCCCCHHHHHHHHHHHCCC
T ss_conf -15630456359999999984759983895054--4-089989--75664797-58999998799889999999994799
Q ss_pred -----------HHHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf -----------12345554200012333447776532
Q gi|254780285|r 420 -----------DSVRFMMLWRKNSELLDFDFCKVKEQ 445 (586)
Q Consensus 420 -----------~aiky~~L~~~~~~~~~Fd~d~~l~~ 445 (586)
..++.|+|+.=..+.-.||++++...
T Consensus 296 ~~~~~Ei~sl~eli~~Fdl~~iskS~A~FD~~KL~wi 332 (481)
T 2o5r_A 296 HPEGKELLTLEELISSFSLDRLSPNPAIFDPQKLKWM 332 (481)
T ss_dssp CTTCCCCCCHHHHHHHCCGGGBCSSCEECCHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHH
T ss_conf 9976367799999987171457888643669999999