HHsearch results for GI: 254780285 and protein with PDBid: 3aii_A
>3aii_A Glutamyl-tRNA synthetase; amino-acyl tRNA synthetase, ligase; 1.65A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=99.01 E-value=1.7e-08 Score=76.99 Aligned_cols=77 Identities=10% Similarity=0.038 Sum_probs=45.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHCCCCCCCCCC
Q ss_conf 22210246521356888999999752255543336777613689999999997226634511531101101221100000
Q gi|254780285|r 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400 (586)
Q Consensus 321 d~vl~rsDGt~~Y~t~DiA~~~~k~e~~~d~~iyVv~~~Q~~h~~~v~~~~~~lg~~~~~~~~~~~~~v~l~~dg~~~km 400 (586)
|+++.|+||.+|| ++|...+=...+...+ |=|.|+-....+=..+.+.||+..+.+.|+ +.+++ ++. +|
T Consensus 262 d~v~~r~d~~PtY---~fA~vVDD~~~gITHV--IRG~D~l~sT~~Q~~L~~aLg~~~P~~~H~--~~L~~--~~~--~l 330 (553)
T 3aii_A 262 PRTGTRYRVYPMM---NFSVAVDDHLLGVTHV--LRGKDHLANREKQEYLYRHLGWEPPEFIHY--GRLKM--DDV--AL 330 (553)
T ss_dssp TTTBTSCCEEECH---HHHHHHHHHHTTCCEE--EC-----CHHHHHHHHHHHHTCCCCEEECC--CCBC----------
T ss_pred CCCCCCCCCCEEE---EEEEEECCCCCCCCEE--EECCHHHCCCHHHHHHHHHCCCCCCCEEEE--EEECC--CCC--CC
T ss_conf 6403330464356---5512643555424669--855321027589999999759998751122--13337--775--44
Q ss_pred CCCCCCHH
Q ss_conf 12233024
Q gi|254780285|r 401 SKRAGDFI 408 (586)
Q Consensus 401 stR~G~~v 408 (586)
|+|++...
T Consensus 331 Skr~~~~~ 338 (553)
T 3aii_A 331 STSGAREG 338 (553)
T ss_dssp -CHHHHHH
T ss_pred CCCCCCCC
T ss_conf 52332113