BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780285|ref|YP_003064698.1| arginyl-tRNA synthetase [Candidatus Liberibacter asiaticus str. psy62] (586 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780285|ref|YP_003064698.1| arginyl-tRNA synthetase [Candidatus Liberibacter asiaticus str. psy62] gi|254039962|gb|ACT56758.1| arginyl-tRNA synthetase [Candidatus Liberibacter asiaticus str. psy62] Length = 586 Score = 1214 bits (3141), Expect = 0.0, Method: Compositional matrix adjust. Identities = 586/586 (100%), Positives = 586/586 (100%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD Sbjct: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG Sbjct: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS Sbjct: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA Sbjct: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ Sbjct: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH Sbjct: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD Sbjct: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF Sbjct: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR Sbjct: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS Sbjct: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586 >gi|315122845|ref|YP_004063334.1| arginyl-tRNA synthetase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496247|gb|ADR52846.1| arginyl-tRNA synthetase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 586 Score = 987 bits (2551), Expect = 0.0, Method: Compositional matrix adjust. Identities = 464/586 (79%), Positives = 531/586 (90%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M+LF DFSSR+ NY+K+ID + +EKK LD IV+ERPR+ HGHLSTNAAMILSRPL LD Sbjct: 1 MHLFTDFSSRMINYIKDIDFEKNIEKKYLDCIVVERPRNIMHGHLSTNAAMILSRPLSLD 60 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P+TIAELI+ARIK+DPDVD V I GKGFINLYLSPSYL KILS IVVSGIEYGR+LIGKG Sbjct: 61 PITIAELIIARIKMDPDVDFVSIGGKGFINLYLSPSYLSKILSFIVVSGIEYGRSLIGKG 120 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KVN+E+VSANPTGPMHVGHCRCAVVGD LA+LM FSGYEVTREYYINDAGAQI+TLA S Sbjct: 121 RKVNVEYVSANPTGPMHVGHCRCAVVGDVLANLMEFSGYEVTREYYINDAGAQIDTLAHS 180 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 VF RYQQ L NND DLPEG+YPG YLK +GKEL DKY SELLNF EEKWLPIV+DY+V+A Sbjct: 181 VFLRYQQVLDNNDFDLPEGFYPGAYLKAIGKELVDKYGSELLNFYEEKWLPIVRDYAVKA 240 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM+II+DDLKALNI+HD+F+SE +FHRGD SPIRDII ++ R+GY+YEG+LP PK+K + Sbjct: 241 MMEIIKDDLKALNIRHDVFVSEKNFHRGDHSPIRDIIGDMGRKGYIYEGVLPAPKAKKNK 300 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 D++ +Q+LFRSTMVGDD+DRPL KSDGSYTYFAADLAYFK KYERGFD M+YVMGSDH Sbjct: 301 TFDINCEQILFRSTMVGDDIDRPLFKSDGSYTYFAADLAYFKYKYERGFDQMVYVMGSDH 360 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 SGYVKRLEAVA+AV+ +K+++NVLLCELVRLYRDGMPIKMSKRAGDFITLR+VVDEVG D Sbjct: 361 SGYVKRLEAVASAVAGEKSKVNVLLCELVRLYRDGMPIKMSKRAGDFITLRYVVDEVGCD 420 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD FPD+DFDLF Sbjct: 421 PVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDFFPDIDFDLF 480 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 P+ + Q+ +D +ELQL++HL EYPR++ENATI QEPY+LAFYL+DLASVFH HWSHGR Sbjct: 481 PQKALSQDFAWDIAELQLVMHLLEYPRIVENATIFQEPYRLAFYLHDLASVFHSHWSHGR 540 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586 ENPRL+F+Q +NR+LT+MRLQLV+AVAS+INSGLNIIGVESP+EMS Sbjct: 541 ENPRLKFIQEDNRELTIMRLQLVYAVASVINSGLNIIGVESPHEMS 586 >gi|325293096|ref|YP_004278960.1| Arginyl-tRNA synthetase [Agrobacterium sp. H13-3] gi|325060949|gb|ADY64640.1| Arginyl-tRNA synthetase [Agrobacterium sp. H13-3] Length = 585 Score = 730 bits (1885), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/588 (59%), Positives = 457/588 (77%), Gaps = 7/588 (1%) Query: 1 MYLFADFSSRLKNYLKEID-CKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF +R+KN L+ +D K EK RI +E PRD +HG ++TNAAM+L++PLG Sbjct: 1 MNIFADFDTRIKNALETLDLVKENREKVDFSRITVESPRDLSHGDVATNAAMVLAKPLGT 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +AELIV ++ D DVDSV +AG GFINL +S Y +++L+ ++ GI++GR+ IG Sbjct: 61 NPRALAELIVPALQADGDVDSVNVAGPGFINLKVSVGYWQRLLAYMIGQGIDFGRSKIGT 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G K+N+E+VSANPTGPMHVGHCR AVVGDTLA+L+AF+GY VT+EYYINDAG+QI+ LA Sbjct: 121 GQKINVEYVSANPTGPMHVGHCRGAVVGDTLANLLAFAGYGVTKEYYINDAGSQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SVF RY++AL + +P G+YPG YL VG+ LAD+Y +L PEEKWLPIVKD ++ Sbjct: 181 SVFLRYREALGEDIGAIPSGFYPGDYLVPVGQALADEYGIKLRAMPEEKWLPIVKDKAIA 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL+ LN++HD+F SE H G+ PI I++L +G+VY+G LPPPK + Sbjct: 241 AMMVMIREDLETLNVKHDVFFSERTLHEGNGGPILSAINDLTFKGHVYKGTLPPPKGELP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DR L+KSDGSYTYFAAD+AYFK K++RGF MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDMDRALMKSDGSYTYFAADVAYFKNKFDRGFSEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVSE K+++ VLLC+LV+LYRDG P+KMSKR+GDF+TLR VVDEVG Sbjct: 360 HGGYVKRLEAVARAVSEGKSKLTVLLCQLVKLYRDGEPVKMSKRSGDFVTLRDVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF-- 477 D VRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC SIFRQA++ FP L Sbjct: 420 DPVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSIFRQAQEAFPGLALSQ 479 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 D +V D +ELQL+ LAEYPR+IE+A +A EP++LAFYLYDLAS FHGHW+ Sbjct: 480 DDMSSSVALIS---DINELQLVAKLAEYPRLIESAALAHEPHRLAFYLYDLASSFHGHWN 536 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G+++ LRF+ NR+L++ RL LV+AVA+++ SGL ++G ++P+EM Sbjct: 537 KGKDHQELRFINDKNRELSIARLGLVNAVANVLKSGLTLLGADAPDEM 584 >gi|307317040|ref|ZP_07596481.1| arginyl-tRNA synthetase [Sinorhizobium meliloti AK83] gi|306897128|gb|EFN27873.1| arginyl-tRNA synthetase [Sinorhizobium meliloti AK83] Length = 585 Score = 726 bits (1873), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/587 (58%), Positives = 454/587 (77%), Gaps = 5/587 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58 M LF DF +R+ L+ I+ I+ ++ LD RI +E PRD +HG ++TNAAM+L++PLG Sbjct: 1 MNLFTDFEARINRILESIEI-IREKRSELDFGRINVEPPRDASHGDVATNAAMVLAKPLG 59 Query: 59 LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 ++P +A+LIV ++ DP+V V +AG GFIN+ LS SY +K+L++I +G++YGR+ G Sbjct: 60 MNPRALADLIVDKLGQDPEVAGVSVAGPGFINVRLSVSYWQKLLAAITRAGVDYGRSTFG 119 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G K+N+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY+VT+EYYINDAG+QI LA Sbjct: 120 AGRKINVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYDVTKEYYINDAGSQIEVLA 179 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 S F RY+QAL + +++P G YPG YL VG+ LAD+Y + L PE+KW+P+VK+ + Sbjct: 180 RSAFLRYRQALGEDIAEIPAGLYPGDYLVPVGEALADEYGTSLRIMPEDKWVPLVKERVI 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 AMM +IR+DL ALN+ HD+F SE H + IR I++L +G+VY+G LPPPK + Sbjct: 240 DAMMAMIREDLAALNVNHDVFFSERALHDNGAARIRTAINDLTFKGHVYKGTLPPPKGQL 299 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 ++ + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGF MIYV+G+ Sbjct: 300 PEEWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKDKFDRGFHEMIYVLGA 358 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GYVKRLEA+A A+S A++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VVDEVG Sbjct: 359 DHGGYVKRLEALARAISGGTAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLREVVDEVG 418 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D VRFMML+RK+SE LDFDF KV EQSK+NPVFYVQYA+ARCRS+FRQA + FPDLD Sbjct: 419 RDPVRFMMLYRKSSEPLDFDFAKVTEQSKDNPVFYVQYAHARCRSVFRQAAEAFPDLDLS 478 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + D +E+QL+ LAEYPRV+E A ++ EP+++AFYLYDLA+VFHGHW+ Sbjct: 479 SVD-FAAAAGAIVDPTEMQLVAKLAEYPRVVEAAALSHEPHRIAFYLYDLAAVFHGHWNK 537 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G+ENP LRFV NR+L++ RL LVHAVAS++ SGL+I G +P+EM Sbjct: 538 GKENPELRFVNDKNRELSIARLGLVHAVASVLKSGLSITGTSAPDEM 584 >gi|222085780|ref|YP_002544310.1| arginyl-tRNA synthetase [Agrobacterium radiobacter K84] gi|254782936|sp|B9JEG3|SYR_AGRRK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|221723228|gb|ACM26384.1| arginyl-tRNA synthetase [Agrobacterium radiobacter K84] Length = 586 Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/587 (58%), Positives = 453/587 (77%), Gaps = 4/587 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58 M LF DF R+KN L++ID ++ ++ LD RI +E PRD +HG ++TNAAM+LS+PLG Sbjct: 1 MNLFTDFEVRIKNALEQIDI-VREKRSELDFGRIGVEPPRDASHGDVATNAAMVLSKPLG 59 Query: 59 LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 ++P +AE+I+A+++ D DV V AG GFIN+ LS Y +++L++++ G ++GR+ +G Sbjct: 60 MNPRALAEIIIAKLQEDADVADVSAAGPGFINIRLSVGYWQRLLATMISEGEKFGRSTVG 119 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+VT+EYYINDAG+QI+ LA Sbjct: 120 AGQKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLGFAGYDVTKEYYINDAGSQIDVLA 179 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 SVF RY++AL ++P G YPG YL VG+ LA ++ ++L PEE+WLPI+++ ++ Sbjct: 180 RSVFIRYREALGEQVGEIPAGLYPGDYLVPVGESLAKEFGTKLRGMPEEQWLPIIRERAI 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 AMM +IR DL+ALN+ HD+F SE H + IR I++L +GYVY+G LPPPK + Sbjct: 240 DAMMVMIRADLEALNVHHDVFFSERTLHANGAALIRTAINDLTFKGYVYKGALPPPKGQL 299 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGF+ MIY++G+ Sbjct: 300 PEDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKNKFDRGFNEMIYILGA 358 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GYVKRLEAVA VSE KA++ VLLC+LV+L+R+G P+KMSKR+GDF+TLR VVDEVG Sbjct: 359 DHGGYVKRLEAVARGVSEGKAKLTVLLCQLVKLFRNGEPVKMSKRSGDFVTLREVVDEVG 418 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 DSVRFMML+RK+SE LDFDF KV EQSK+NPVFYVQYA+ARC SIFRQA++ FPDLD Sbjct: 419 RDSVRFMMLYRKSSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSIFRQAQEAFPDLDIA 478 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 D +ELQL+ +AE+PR+IE A AQEP+++AFYLYDLAS FHGHW+ Sbjct: 479 SLDLAKAVGGVISDPAELQLVAKIAEFPRIIEAAAQAQEPHRIAFYLYDLASSFHGHWNK 538 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G++ P LRFV NR+L++ RL LVHAVAS++ SGL I G +P+EM Sbjct: 539 GKDLPELRFVNDKNRELSIARLGLVHAVASVLKSGLGITGTAAPDEM 585 >gi|116251801|ref|YP_767639.1| arginyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841] gi|115256449|emb|CAK07533.1| putative arginyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841] Length = 585 Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/588 (57%), Positives = 455/588 (77%), Gaps = 7/588 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58 M LF DF +R+K L++ID ++ ++ LD RI +E PRD +HG ++TNAAM+L++PLG Sbjct: 1 MNLFTDFEARIKTALEQIDL-VREKRSELDFGRITVEPPRDASHGDVATNAAMVLAKPLG 59 Query: 59 LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +P +A++I+A++K D DV V +AG GFIN+ L+ Y +++L+S++ +G +YGR+ +G Sbjct: 60 TNPRALADVIIAKLKEDADVADVSVAGPGFINIRLAVGYWQRLLASMIGAGTDYGRSTLG 119 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 +G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ LA Sbjct: 120 EGKKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVLA 179 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 SVF RY++AL ++P G YPG YL VG+ LA Y L N PE++W+PIVKD ++ Sbjct: 180 RSVFLRYREALGEKIGEIPSGLYPGDYLVPVGQSLAADYGVRLHNMPEDQWMPIVKDRTI 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 AMM +IR+DL ALN+ HD+F SE H + IR I++L +GYVY+G LPPPK + Sbjct: 240 DAMMVMIREDLAALNVHHDVFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQL 299 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+ Sbjct: 300 PEDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKNKFDRGFDEMIYVLGA 358 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GYVKRLEAVA VS+ KA++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG Sbjct: 359 DHGGYVKRLEAVARGVSDGKAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVG 418 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 DSVRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA++ FPDL D Sbjct: 419 RDSVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSVFRQAREAFPDL--D 476 Query: 479 LFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 + P N+ + D +ELQL+ LAE+PR++E A +QEP+++AFYLYD+AS FH HW+ Sbjct: 477 VSPENLAKTVAGIGDPAELQLVAKLAEFPRIVEAAAQSQEPHRVAFYLYDVASSFHAHWN 536 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G++ P LRFV NR+ ++ RL LV+AVAS++ SGL I G +P+EM Sbjct: 537 KGKDQPELRFVNDKNRESSIARLGLVYAVASVLKSGLAITGTAAPDEM 584 >gi|15965276|ref|NP_385629.1| arginyl-tRNA synthetase [Sinorhizobium meliloti 1021] gi|307309299|ref|ZP_07588967.1| arginyl-tRNA synthetase [Sinorhizobium meliloti BL225C] gi|23822199|sp|Q92Q31|SYR_RHIME RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|15074456|emb|CAC46102.1| Probable arginyl-tRNA synthetase (arginine--tRNA ligase) [Sinorhizobium meliloti 1021] gi|306900300|gb|EFN30917.1| arginyl-tRNA synthetase [Sinorhizobium meliloti BL225C] Length = 585 Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/587 (58%), Positives = 453/587 (77%), Gaps = 5/587 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58 M LF DF +R+ L+ I+ I+ ++ LD RI +E PRD +HG ++TNAAM+L++PLG Sbjct: 1 MNLFTDFEARINRILESIEI-IREKRSELDFGRINVEPPRDASHGDVATNAAMVLAKPLG 59 Query: 59 LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 ++P +A+LIV ++ DP+V V +AG GFIN+ LS SY +K+L++I +G++YGR+ G Sbjct: 60 MNPRALADLIVDKLGQDPEVAGVSVAGPGFINVRLSVSYWQKLLAAITRAGVDYGRSTFG 119 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G K+N+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY+VT+EYYINDAG+QI LA Sbjct: 120 AGRKINVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYDVTKEYYINDAGSQIEVLA 179 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 S F RY+QAL + +++P G YPG YL VG+ LAD+Y + L PE+KW+P+VK+ + Sbjct: 180 RSAFLRYRQALGEDIAEIPAGLYPGDYLVPVGEALADEYGTSLRIMPEDKWVPLVKERVI 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 AMM +IR+DL ALN+ HD+F SE H + IR I++L +G+VY+G LPPPK + Sbjct: 240 DAMMAMIREDLAALNVNHDVFFSERALHDNGAARIRTAINDLTFKGHVYKGTLPPPKGQL 299 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGF MIYV+G+ Sbjct: 300 PEDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKDKFDRGFHEMIYVLGA 358 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GYVKRLEA+A A+S A++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VVDEVG Sbjct: 359 DHGGYVKRLEALARAISGGTAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVDEVG 418 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D VRFMML+RK+SE LDFDF KV EQSK+NPVFYVQYA+ARCRS+FRQA + FPDLD Sbjct: 419 RDPVRFMMLYRKSSEPLDFDFAKVTEQSKDNPVFYVQYAHARCRSVFRQAAEAFPDLDLS 478 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + D +E+QL+ LAEYPRV+E A ++ EP+++AFYLYDLA+VFHGHW+ Sbjct: 479 SVD-FAAAAGAIVDPTEMQLVAKLAEYPRVVEAAALSHEPHRIAFYLYDLAAVFHGHWNK 537 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G+ENP LRFV NR+L++ RL LVHAVAS++ SGL+I G +P+EM Sbjct: 538 GKENPELRFVNDKNRELSIARLGLVHAVASVLKSGLSITGTSAPDEM 584 >gi|86357446|ref|YP_469338.1| arginyl-tRNA synthetase [Rhizobium etli CFN 42] gi|109895025|sp|Q2K975|SYR_RHIEC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|86281548|gb|ABC90611.1| arginyl-tRNA synthetase (Arginine--tRNA ligase) protein [Rhizobium etli CFN 42] Length = 585 Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/588 (58%), Positives = 454/588 (77%), Gaps = 7/588 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58 M LF DF +R+K L++ID ++ ++ LD RI +E PRD +HG ++TNAAM+L++PLG Sbjct: 1 MNLFTDFEARIKTALEQIDL-VREKRSELDFGRIAVEPPRDASHGDVATNAAMVLAKPLG 59 Query: 59 LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +P +A++I+A++K D DV V +AG GFIN+ L+ Y +++L+SI+ +GI+YGR+ +G Sbjct: 60 TNPRALADVIIAKLKEDADVADVSVAGPGFINIRLAVGYWQRLLASIIGAGIDYGRSSLG 119 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 +G VN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ LA Sbjct: 120 EGRTVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVLA 179 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 SVF RY++AL ++P G YPG YL VG+ LA Y L N PEE+W+PIVKD ++ Sbjct: 180 RSVFLRYREALGERIGEIPSGLYPGDYLVPVGQSLAADYGVRLHNMPEEEWMPIVKDRTI 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 AMM +IR+DL ALN+ HDIF SE H + IR I++L +GYVY+G LPPPK + Sbjct: 240 DAMMAMIREDLAALNVHHDIFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQL 299 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGF+ MIYV+G+ Sbjct: 300 PEDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKNKFDRGFEEMIYVLGA 358 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GYVKRLEAVA VS+ KA++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG Sbjct: 359 DHGGYVKRLEAVARGVSDGKAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVG 418 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 DSVRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQAK+ F L D Sbjct: 419 RDSVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSVFRQAKEAFAGL--D 476 Query: 479 LFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 + P ++ + D +ELQL+ LAE+PR+IE+A +QEP+++AFYLYDLAS FH HW+ Sbjct: 477 VSPEDLAKAVAGIEDPAELQLVAKLAEFPRIIESAAQSQEPHRIAFYLYDLASAFHAHWN 536 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G++ P LRFV NR+ T+ RL LV+AVAS++ SGL I G +P+EM Sbjct: 537 KGKDQPELRFVNDKNRESTIARLGLVYAVASVLKSGLAITGTAAPDEM 584 >gi|150396377|ref|YP_001326844.1| arginyl-tRNA synthetase [Sinorhizobium medicae WSM419] gi|166232845|sp|A6U8M9|SYR_SINMW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|150027892|gb|ABR60009.1| arginyl-tRNA synthetase [Sinorhizobium medicae WSM419] Length = 585 Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/590 (58%), Positives = 453/590 (76%), Gaps = 11/590 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58 M LF DF +R+ L+ ID I+ ++ LD RI +E PRD +HG ++TNAAM+L++PLG Sbjct: 1 MNLFTDFEARINRILESIDV-IREKRSELDFRRINVEPPRDASHGDVATNAAMVLAKPLG 59 Query: 59 LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 ++P +A+LI ++ DP+V V +AG GFIN+ LS SY +K+L+ I +G++YGR+ +G Sbjct: 60 MNPRALADLIGDKLAQDPEVAEVSVAGPGFINVRLSVSYWQKLLAVITRAGVDYGRSALG 119 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G K+N+E+VSANPTGPMHVGHCR AVVGD LA+L+AFSG++VT+EYYINDAG+QI LA Sbjct: 120 AGRKINVEYVSANPTGPMHVGHCRGAVVGDALANLLAFSGFDVTKEYYINDAGSQIEVLA 179 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 S F RY+QAL + ++P G YPG YL G+ LAD+Y + L PE+KW+P+VK+ + Sbjct: 180 RSAFLRYRQALGEDIGEIPAGLYPGDYLVPAGEALADEYGTSLRIMPEDKWMPLVKERVI 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 AMM +IR+DL ALN+ HD+F SE H + IR I++L +G+VY+G+LPPPK + Sbjct: 240 DAMMAMIREDLAALNVNHDVFFSERALHDNGAARIRTAINDLTFKGHVYKGMLPPPKGQL 299 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+ Sbjct: 300 PEDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKDKFDRGFDEMIYVLGA 358 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GYVKRLEA+A A+S A++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VVDEVG Sbjct: 359 DHGGYVKRLEALARAISGGSAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLREVVDEVG 418 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF- 477 D VRFMML+RK+SE LDFDF KV EQSK+NPVFYVQYA+ARCRS+FRQA + FPDLD Sbjct: 419 RDPVRFMMLYRKSSEPLDFDFAKVTEQSKDNPVFYVQYAHARCRSVFRQAAEAFPDLDLS 478 Query: 478 --DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 DL + D +E+QL+ LAEYPRV+E A + EP+++AFYLYDLA+VFHGH Sbjct: 479 SIDL----AGAAGAIADPTEMQLVAKLAEYPRVVEAAAFSHEPHRIAFYLYDLAAVFHGH 534 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W+ G+ENP LRFV NR+L++ RL LVHAVAS++ SGL+I G +P+EM Sbjct: 535 WNKGKENPALRFVNDKNRELSIARLGLVHAVASVLKSGLSITGTSAPDEM 584 >gi|15889018|ref|NP_354699.1| arginyl-tRNA synthetase [Agrobacterium tumefaciens str. C58] gi|23822194|sp|Q8UEP4|SYR_AGRT5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|15156807|gb|AAK87484.1| arginyl-tRNA synthetase [Agrobacterium tumefaciens str. C58] Length = 585 Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/594 (57%), Positives = 452/594 (76%), Gaps = 19/594 (3%) Query: 1 MYLFADFSSRLKNYLKEID-CKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF +R+KN L+ +D K EK RI +E PRD +HG ++TNAAM+L++PLG Sbjct: 1 MNIFADFDTRIKNALETLDLVKENREKVDFSRITVESPRDLSHGDVATNAAMVLAKPLGT 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +AEL+V ++ D DVD V +AG GFINL +S Y +++L+ ++ G+++GR+ +G Sbjct: 61 NPRALAELLVPALQADGDVDGVNVAGPGFINLKVSVGYWQRLLADMIGQGVDFGRSTVGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G K+N+E+VSANPTGPMHVGHCR AVVGDTLA+L+AF+GY VT+EYYINDAG+QI+ LA Sbjct: 121 GQKINVEYVSANPTGPMHVGHCRGAVVGDTLANLLAFAGYGVTKEYYINDAGSQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SVF RY++AL + +P G YPG YL VG+ LAD+Y +L PEEKWLPIVKD ++ Sbjct: 181 SVFLRYREALGEDIGSIPSGLYPGDYLVPVGQALADEYGIKLRAMPEEKWLPIVKDKAID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL LN++HD+F SE H G+ PI I++L +G+VY+G LPPPK + Sbjct: 241 AMMVMIREDLALLNVRHDVFFSERTLHEGNGGPILSAINDLTFKGHVYKGTLPPPKGELP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + DR+Q LFRST VGDD+DR L+KSDGSYTYFAAD+AYFK K++RGF MIYV+G+D Sbjct: 301 DDWE-DREQTLFRSTEVGDDMDRALMKSDGSYTYFAADVAYFKNKFDRGFSEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVSE K+++ VLLC+LV+L+RDG P+KMSKR+GDF+TLR VVDEVG Sbjct: 360 HGGYVKRLEAVARAVSEGKSKLTVLLCQLVKLFRDGEPVKMSKRSGDFVTLRDVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC+SIFRQA++ FP L Sbjct: 420 DPVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCKSIFRQAQEAFPGL---- 475 Query: 480 FPRNVIPQESEF--------DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 P + D +ELQL+ LAEYPR+IE+A ++ EP++LAFYLYDLA Sbjct: 476 -----APSAEDMAASVALISDINELQLVAKLAEYPRLIESAALSHEPHRLAFYLYDLAGS 530 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 FHGHW+ G+++ LRF+ NR+L++ RL LV+AVA+++ SGL ++G ++P+EM Sbjct: 531 FHGHWNKGKDHQELRFINDKNRELSIARLGLVNAVANVLKSGLTLLGADAPDEM 584 >gi|209549083|ref|YP_002281000.1| arginyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|238065092|sp|B5ZMF2|SYR_RHILW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|209534839|gb|ACI54774.1| arginyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 585 Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust. Identities = 343/593 (57%), Positives = 454/593 (76%), Gaps = 17/593 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58 M LF DF +R+K L++ID ++ ++ LD RI +E PRD +HG ++TNAAM+L++PLG Sbjct: 1 MNLFTDFEARIKTALEQIDL-VREKRSELDFGRIAVEPPRDASHGDVATNAAMVLAKPLG 59 Query: 59 LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +P +A++I+A+++ D DV V +AG GFIN+ L+ Y +++L++++ +G +YGR+ +G Sbjct: 60 TNPRALADIIIAKLREDADVADVSVAGPGFINIRLAVGYWQRLLAAMIGAGTDYGRSTLG 119 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 +G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ LA Sbjct: 120 EGRKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVLA 179 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 SVF RY++AL ++P G YPG YL VG+ LA Y L N PE++W+PIVKD ++ Sbjct: 180 RSVFLRYREALGEKIGEIPSGLYPGDYLVPVGQSLAADYGVRLHNMPEDQWMPIVKDRTI 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 AMM +IR+DL +LN+ HDIF SE H + IR I++L +GYVY+G LPPPK + Sbjct: 240 DAMMVMIREDLASLNVHHDIFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQL 299 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+ Sbjct: 300 PEDWE-DREQTLFRSTEVGDDMDRPLIKSDGSYTYFAADVAYFKNKFDRGFDEMIYVLGA 358 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GYVKRLEAVA VS+ KA++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG Sbjct: 359 DHGGYVKRLEAVARGVSDGKAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVG 418 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 SDSVRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA++ F DLD Sbjct: 419 SDSVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSVFRQAREAFGDLD-- 476 Query: 479 LFPRNVIPQE------SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 V P+E D +ELQL+ LAE+PR++E A +QEP++LAFYLYDLAS F Sbjct: 477 -----VSPEEFAQTVAGIGDPAELQLVAKLAEFPRIVEAAAQSQEPHRLAFYLYDLASSF 531 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H HW+ G++ P LRFV NR+ T+ RL LV+AVAS++ SGL I G +P+EM Sbjct: 532 HAHWNKGKDQPELRFVNDKNRESTIARLGLVYAVASVLKSGLAITGTAAPDEM 584 >gi|227821928|ref|YP_002825898.1| arginyl-tRNA synthetase [Sinorhizobium fredii NGR234] gi|227340927|gb|ACP25145.1| arginyl-tRNA synthetase [Sinorhizobium fredii NGR234] Length = 589 Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/587 (58%), Positives = 450/587 (76%), Gaps = 4/587 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58 M LF DF SR+KN L+ +D ++ ++ +D R+ IE PRD +HG ++TNAAM+L++ LG Sbjct: 4 MNLFTDFESRIKNILESLDI-VREKRSDVDFGRVSIEPPRDPSHGDVATNAAMVLAKSLG 62 Query: 59 LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +P +A+LIV +++ DP+V V +AG GFIN+ LS SY +K+LS++V +G ++GR+ +G Sbjct: 63 TNPRALADLIVDKLRQDPEVAEVSVAGPGFINVRLSVSYWQKLLSAMVSAGTDFGRSTVG 122 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY+V +EYYINDAG+QI+ LA Sbjct: 123 AGRKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYDVAKEYYINDAGSQIDVLA 182 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 S F RY+QAL ++P G YPG YL VG+ LAD++ + L PE+KW+P+VK+ + Sbjct: 183 RSAFLRYRQALGEEIGEIPAGLYPGDYLVPVGEALADEFGTSLRIMPEDKWMPLVKERVI 242 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 AMM +IR+DL ALN+ HD+F SE H + IR I++L +G+VY G LPPPK + Sbjct: 243 DAMMAMIREDLAALNVNHDVFFSERTLHDNGAARIRTAINDLTFKGHVYIGTLPPPKGQL 302 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGF MIYV+G+ Sbjct: 303 PEDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKDKFDRGFQEMIYVLGA 361 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GYVKRLEA+A A+SE A++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VVDEVG Sbjct: 362 DHGGYVKRLEALARAISEGTAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVDEVG 421 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D VRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQAK+ FPDLD Sbjct: 422 RDPVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCCSVFRQAKEAFPDLDLS 481 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + D +ELQL+ LAEYPRV+E A ++QEP+++AFYLYDLA+ FH W+ Sbjct: 482 SVDLAGAVIGAIVDPAELQLVAKLAEYPRVVEAAALSQEPHRIAFYLYDLAAAFHALWNK 541 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G+ENP LRFV NR+L++ RL LVHAVAS++ SGL++ G +P EM Sbjct: 542 GKENPELRFVNDKNRELSIARLGLVHAVASVLKSGLSVTGTSAPEEM 588 >gi|241204410|ref|YP_002975506.1| arginyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858300|gb|ACS55967.1| arginyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 585 Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust. Identities = 340/588 (57%), Positives = 452/588 (76%), Gaps = 7/588 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58 M LF DF SR+K L++ID ++ ++ LD RI +E PRD +HG ++TNAAM+L++ LG Sbjct: 1 MNLFTDFESRIKTALEQIDL-VREKRSELDFGRITVEPPRDASHGDVATNAAMVLAKVLG 59 Query: 59 LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +P +A++I+ ++K D DV V +AG GFIN+ L+ Y +++L+S++ +G +YGR+ +G Sbjct: 60 TNPRALADVIITKLKEDADVADVSVAGPGFINIRLAVGYWQRLLASMIGAGTDYGRSSLG 119 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ LA Sbjct: 120 KGKKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVLA 179 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 SVF RY++AL ++P G YPG YL VG+ LA Y L N PE++W+PIVKD ++ Sbjct: 180 RSVFLRYREALGEKIGEIPSGLYPGDYLVPVGQSLAADYGVRLHNMPEDQWMPIVKDRTI 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 AMM +IRDDL ALN+ HD+F SE H + IR I++L +GYVY+G LPPPK + Sbjct: 240 DAMMVMIRDDLAALNVHHDVFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQL 299 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+ Sbjct: 300 PEDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKNKFDRGFDEMIYVLGA 358 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GYVKRLEAVA VS+ +A++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG Sbjct: 359 DHGGYVKRLEAVARGVSDGQAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVG 418 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 DSVRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA++ F DL D Sbjct: 419 RDSVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSVFRQAREAFADL--D 476 Query: 479 LFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 + P N+ + D +ELQL+ LAE+PR++E A +QEP+++AFYLYD+AS FH HW+ Sbjct: 477 VSPENLAKTVAGIGDPAELQLVAKLAEFPRIVEAAAQSQEPHRVAFYLYDVASSFHAHWN 536 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G++ P LRFV NR+ ++ RL LV+AVAS++ SGL I G +P+EM Sbjct: 537 KGKDQPELRFVNDKNRESSIARLGLVYAVASVLKSGLAITGTAAPDEM 584 >gi|222148975|ref|YP_002549932.1| arginyl-tRNA synthetase [Agrobacterium vitis S4] gi|254782937|sp|B9JXE6|SYR_AGRVS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|221735961|gb|ACM36924.1| arginyl-tRNA synthetase [Agrobacterium vitis S4] Length = 585 Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/588 (58%), Positives = 446/588 (75%), Gaps = 7/588 (1%) Query: 1 MYLFADFSSRLKNYLKEID-CKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFADF +R+K L+ +D K K + DRIV+E PRD +HG +TNAAM+L++PLG+ Sbjct: 1 MNLFADFENRIKTALETLDLVKEKRSELSFDRIVVEPPRDASHGDAATNAAMVLAKPLGV 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +A+LI ++K D D+ V +AG GF+N+ LS +Y +++L++++ G ++GR+ G Sbjct: 61 SPRVLADLIGEKLKEDADIAEVSVAGPGFLNIRLSVAYWQRLLANVIAGGTDFGRSQTGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY VT+EYYINDAG+QI+ LA Sbjct: 121 GRKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVTKEYYINDAGSQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SVF RY++AL ++P G YPG YL VG+ LA +Y L N PEE+W+ IVKD ++ Sbjct: 181 SVFLRYREALGEAVGEIPAGLYPGDYLIPVGEALAQEYGVRLHNMPEEQWMEIVKDRAID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL ALN+ HD+F SE H + IR I++L +G+VY G LPPPK + Sbjct: 241 AMMVMIREDLAALNVHHDLFYSERQLHANGAAAIRTAINDLTFKGHVYRGTLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK KY+RGFD MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKDKYDRGFDRMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVSE KA++ VLLC+LV+LYRDG P+KMSKR+GDF+TLR VV+EVG Sbjct: 360 HGGYVKRLEAVAKAVSEGKAKLTVLLCQLVKLYRDGEPVKMSKRSGDFVTLRDVVEEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF-- 477 DSVRFMML+RK+SE LDFDF KV EQSK+NPVFYVQYA+ARC SIFRQA++ F D+D Sbjct: 420 DSVRFMMLYRKSSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSIFRQAREAFGDIDLSP 479 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 D+ V + SE+QLI LAEYPR+IE + + EP+++AFYLYDLAS FH HW+ Sbjct: 480 DVLEAAVT---GITEPSEVQLIAKLAEYPRIIEASAQSMEPHRIAFYLYDLASSFHAHWN 536 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G++ P LRFV NR+ ++ RL LVHAVAS++ SGL I G ++P EM Sbjct: 537 KGKDQPELRFVNDKNRQSSLARLGLVHAVASVLQSGLAITGTDAPQEM 584 >gi|327191799|gb|EGE58799.1| arginyl-tRNA synthetase protein [Rhizobium etli CNPAF512] Length = 585 Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/588 (58%), Positives = 450/588 (76%), Gaps = 7/588 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58 M LF DF +R+K L++ID ++ ++ LD RI +E PRD +HG ++TNAAM+L++PLG Sbjct: 1 MNLFTDFEARIKTALEQIDL-VREKRSELDFGRITVEPPRDASHGDVATNAAMVLAKPLG 59 Query: 59 LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +P +A++I+A++K D DV V +AG GFIN+ LS Y +++L+S++ SG +YGR+ +G Sbjct: 60 SNPRALADVIIAKLKEDADVADVSVAGPGFINIRLSVGYWQRLLASMIASGTDYGRSTLG 119 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ LA Sbjct: 120 AGRKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVLA 179 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 SVF RY++AL ++P G YPG YL VG+ LA Y L N PEE+W+PIVKD ++ Sbjct: 180 RSVFLRYREALGERIGEIPSGLYPGDYLVPVGQSLAADYGVRLHNMPEEQWMPIVKDRTI 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 AMM +IR+DL ALN+ HDIF SE H + IR I++L +GYVY+G LPPPK + Sbjct: 240 SAMMVMIREDLAALNVHHDIFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQL 299 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+ Sbjct: 300 PEDWE-DREQTLFRSTEVGDDMDRPLIKSDGSYTYFAADVAYFKNKFDRGFDEMIYVLGA 358 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GYVKRLEAVA VS+ KA++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG Sbjct: 359 DHGGYVKRLEAVARGVSDGKAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVG 418 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 DSVRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA++ FP L Sbjct: 419 RDSVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSVFRQAREAFPGL--A 476 Query: 479 LFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 + ++ + D +ELQL+ LAE+PRV+E A +QEP+++AFYLYDLAS FH HW+ Sbjct: 477 VSAEDLAKAVAGIGDPAELQLVAKLAEFPRVVEAAAQSQEPHRIAFYLYDLASSFHAHWN 536 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G++ LRFV NR+ ++ RL LV+AVAS++ SGL I G +P+EM Sbjct: 537 KGKDQTELRFVNDKNRESSIARLGLVYAVASVLKSGLAITGTAAPDEM 584 >gi|190891507|ref|YP_001978049.1| arginyl-tRNA synthetase [Rhizobium etli CIAT 652] gi|238692531|sp|B3PXT5|SYR_RHIE6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|190696786|gb|ACE90871.1| arginyl-tRNA synthetase protein [Rhizobium etli CIAT 652] Length = 585 Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/588 (58%), Positives = 449/588 (76%), Gaps = 7/588 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58 M LF DF +R+K L++ID ++ ++ LD RI +E PRD +HG ++TNAAM+L++PLG Sbjct: 1 MNLFTDFEARIKTALEQIDL-VREKRSELDFGRITVEPPRDASHGDVATNAAMVLAKPLG 59 Query: 59 LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +P +A++I+A++K D DV V +AG GFIN+ LS Y +++L+S++ SG +YGR+ +G Sbjct: 60 SNPRALADVIIAKLKEDADVADVSVAGPGFINIRLSVGYWQRLLASMINSGTDYGRSTLG 119 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ LA Sbjct: 120 AGRKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVLA 179 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 SVF RY++AL ++P G YPG YL VG+ LA Y L N PEE+W+PIVKD ++ Sbjct: 180 RSVFLRYREALGERIGEIPSGLYPGDYLVPVGQSLAADYGVRLHNMPEEQWMPIVKDRTI 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 AMM +IR+DL ALN+ HDIF SE H + IR I++L +GYVY+G LPPPK + Sbjct: 240 SAMMVMIREDLAALNVHHDIFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQL 299 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+ Sbjct: 300 PEDWE-DREQTLFRSTEVGDDMDRPLIKSDGSYTYFAADVAYFKNKFDRGFDEMIYVLGA 358 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GYVKRLEAVA VS KA++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG Sbjct: 359 DHGGYVKRLEAVARGVSNGKAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVG 418 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 DSVRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA++ FP L+ Sbjct: 419 RDSVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSVFRQAREAFPGLEVS 478 Query: 479 LFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 ++ + D +ELQL+ LAE+PRV+E A +QEP+++AFYLYDLAS FH HW+ Sbjct: 479 --AEDLAKAVAGIGDPAELQLVAKLAEFPRVVEAAAQSQEPHRIAFYLYDLASSFHAHWN 536 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G++ LRFV NR+ ++ RL LV+AVAS++ SGL I G +P+EM Sbjct: 537 KGKDQTELRFVNDKNRESSIARLGLVYAVASVLKSGLAITGTAAPDEM 584 >gi|163759455|ref|ZP_02166540.1| putative arginyl-tRNA synthetase [Hoeflea phototrophica DFL-43] gi|162283052|gb|EDQ33338.1| putative arginyl-tRNA synthetase [Hoeflea phototrophica DFL-43] Length = 586 Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust. Identities = 327/586 (55%), Positives = 434/586 (74%), Gaps = 2/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDC-KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F DF R+K ++ +D + K E R+ +E PRD AH +STNAAM+L++PLG+ Sbjct: 1 MNVFKDFEERIKTAVQALDAVREKGEAVDFARLAVEPPRDPAHDDISTNAAMVLAKPLGV 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +AE I A+ D DV +AG GF+N L+P++ +++++ ++ G+++GR+ +G Sbjct: 61 NPRALAEQIAAQFSGDADVAETSVAGPGFLNFRLTPTFWQRLVADVIGKGVDFGRSNLGD 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+G++VT+EYY+NDAG+QI+ LA Sbjct: 121 GLKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFTGFDVTKEYYVNDAGSQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SVF RY++AL + ++P G YPG YL VG+ LA + L N PEE+WL I+KD ++ Sbjct: 181 SVFLRYREALGEDIGEIPPGLYPGDYLVPVGQALAADFGPRLHNMPEEEWLGILKDRAID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IRDDL LN+ HD+F SE H G + IR I++L +G+VY+G LPPPK + Sbjct: 241 AMMVMIRDDLATLNVHHDVFFSERSLHAGSAAKIRTAINDLTFKGHVYKGTLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGF MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSYTYFAADVAYFKDKFDRGFSEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAV AVSE K ++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG Sbjct: 360 HGGYVKRLEAVNRAVSEGKTKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVGC 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 DSVRFMML+RK+SE LDFDF KV EQSK+NPVFYVQYA+ARC S+ RQA ++FPDLD Sbjct: 420 DSVRFMMLYRKSSESLDFDFAKVTEQSKDNPVFYVQYAHARCASVMRQALEVFPDLDISP 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 SE+ LI L EYPR++E A QEP+++AFYLYDLAS+ H HW+ G Sbjct: 480 EALGAADLSELSHESEVALIAKLGEYPRMLEAAASGQEPHRVAFYLYDLASMLHAHWNKG 539 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R+ P LRFV NR T+ RL LV+AVAS++ SGL+I G ++P EM Sbjct: 540 RDEPGLRFVNDKNRHSTVARLGLVYAVASVLKSGLSITGTDAPEEM 585 >gi|239831756|ref|ZP_04680085.1| arginyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301] gi|239824023|gb|EEQ95591.1| arginyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301] Length = 603 Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust. Identities = 331/590 (56%), Positives = 434/590 (73%), Gaps = 11/590 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF +R+K L++ID K K ++ L RI +E PRD +HG ++TNAAM+LS+ +G Sbjct: 19 MNIFADFDARIKKTLQDIDLKPKDGSELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 78 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A I + D DV++V +AG GFINL L SY ++ L++++ G ++GR+ +G Sbjct: 79 NPRELASRIAEALASDEDVETVDVAGPGFINLRLKASYWQRELAAMLNEGTDFGRSKLGS 138 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 GTKVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA Sbjct: 139 GTKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 198 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL + ++P G YPG YL VG+ELA ++ + LL PE + L +VKD ++ Sbjct: 199 SVMVRYREALGEDIGEIPSGLYPGDYLVPVGQELAKEFGTRLLEMPEAEALALVKDRTID 258 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL ALN+ HD+F SE H IR+ I++L +G+VY+G LPPPK + Sbjct: 259 AMMAMIRADLDALNVHHDVFFSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 318 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDG++TYFA D+AYFK KY+RGF+ MIYV+G+D Sbjct: 319 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGAFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 377 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+RDG P++MSKRAG+FITLR VVDEVG Sbjct: 378 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRDGEPVRMSKRAGEFITLRDVVDEVGR 437 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RKN LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D D D Sbjct: 438 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLADLDR 497 Query: 480 FPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + + F D SE+ L+ LAEYPR+IE A I QEP++LAFYLYDLAS FH Sbjct: 498 -----VGMAANFGKLTDESEIALVRKLAEYPRLIEAAAIHQEPHRLAFYLYDLASAFHSQ 552 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W+ G ENP LRF++ N+ L++ RL LV V+ ++ SGL IIG ++P EM Sbjct: 553 WNRGTENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 602 >gi|256060982|ref|ZP_05451140.1| arginyl-tRNA synthetase [Brucella neotomae 5K33] gi|261324984|ref|ZP_05964181.1| arginyl-tRNA synthetase [Brucella neotomae 5K33] gi|261300964|gb|EEY04461.1| arginyl-tRNA synthetase [Brucella neotomae 5K33] Length = 585 Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/590 (56%), Positives = 435/590 (73%), Gaps = 11/590 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF +R+K L++ID K K ++ L RI +E PRD +HG ++TNAAM+LS+ +G Sbjct: 1 MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A I +K D DV+SV +AG GFINL L SY ++ L ++ G ++GR+ +G Sbjct: 61 NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL + ++P G YPG YL VG+ELA ++ ++LL PE + L IVKD ++ Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL ALN+ HD+F SE H IR+ I++L +G+VY+G LPPPK + Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RKN LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D +D D Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479 Query: 480 FPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + S F D SE+ L+ LAEYPR+IE+A I QEP++LAFYLYDLAS FH Sbjct: 480 -----VAMGSHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQ 534 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W+ G ENP LRF++ N+ L++ RL LV V+ ++ SGL IIG ++P EM Sbjct: 535 WNRGTENPDLRFIKVNDPNLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584 >gi|254704184|ref|ZP_05166012.1| arginyl-tRNA synthetase [Brucella suis bv. 3 str. 686] gi|261754853|ref|ZP_05998562.1| arginyl-tRNA synthetase [Brucella suis bv. 3 str. 686] gi|261744606|gb|EEY32532.1| arginyl-tRNA synthetase [Brucella suis bv. 3 str. 686] Length = 585 Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/590 (56%), Positives = 435/590 (73%), Gaps = 11/590 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF +R+K L++ID K K ++ L RI +E PRD +HG ++TNAAM+LS+ +G Sbjct: 1 MNIFADFDARIKKTLQDIDLKQKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A I +K D DV+SV +AG GFINL L SY ++ L ++ G ++GR+ +G Sbjct: 61 NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL + ++P G YPG YL VG+ELA ++ ++LL PE + L IVKD ++ Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL ALN+ HD+F SE H IR+ I++L +G+VY+G LPPPK + Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RKN LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D +D D Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479 Query: 480 FPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + S F D SE+ L+ LAEYPR+IE+A I QEP++LAFYLYDLAS FH Sbjct: 480 -----VAMGSHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQ 534 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W+ G ENP LRF++ N+ L++ RL LV V+ ++ SGL IIG ++P EM Sbjct: 535 WNRGTENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584 >gi|23501763|ref|NP_697890.1| arginyl-tRNA synthetase [Brucella suis 1330] gi|161618837|ref|YP_001592724.1| arginyl-tRNA synthetase [Brucella canis ATCC 23365] gi|225627365|ref|ZP_03785402.1| arginyl-tRNA synthetase [Brucella ceti str. Cudo] gi|254701641|ref|ZP_05163469.1| arginyl-tRNA synthetase [Brucella suis bv. 5 str. 513] gi|254706913|ref|ZP_05168741.1| arginyl-tRNA synthetase [Brucella pinnipedialis M163/99/10] gi|254709979|ref|ZP_05171790.1| arginyl-tRNA synthetase [Brucella pinnipedialis B2/94] gi|254713979|ref|ZP_05175790.1| arginyl-tRNA synthetase [Brucella ceti M644/93/1] gi|254716962|ref|ZP_05178773.1| arginyl-tRNA synthetase [Brucella ceti M13/05/1] gi|256031472|ref|ZP_05445086.1| arginyl-tRNA synthetase [Brucella pinnipedialis M292/94/1] gi|256159598|ref|ZP_05457360.1| arginyl-tRNA synthetase [Brucella ceti M490/95/1] gi|256254878|ref|ZP_05460414.1| arginyl-tRNA synthetase [Brucella ceti B1/94] gi|256369305|ref|YP_003106813.1| arginyl-tRNA synthetase [Brucella microti CCM 4915] gi|260168606|ref|ZP_05755417.1| arginyl-tRNA synthetase [Brucella sp. F5/99] gi|260566566|ref|ZP_05837036.1| arginyl-tRNA synthetase [Brucella suis bv. 4 str. 40] gi|261218767|ref|ZP_05933048.1| arginyl-tRNA synthetase [Brucella ceti M13/05/1] gi|261222062|ref|ZP_05936343.1| arginyl-tRNA synthetase [Brucella ceti B1/94] gi|261314377|ref|ZP_05953574.1| arginyl-tRNA synthetase [Brucella pinnipedialis M163/99/10] gi|261317527|ref|ZP_05956724.1| arginyl-tRNA synthetase [Brucella pinnipedialis B2/94] gi|261321734|ref|ZP_05960931.1| arginyl-tRNA synthetase [Brucella ceti M644/93/1] gi|261752194|ref|ZP_05995903.1| arginyl-tRNA synthetase [Brucella suis bv. 5 str. 513] gi|261758080|ref|ZP_06001789.1| arginyl-tRNA synthetase [Brucella sp. F5/99] gi|265988562|ref|ZP_06101119.1| arginyl-tRNA synthetase [Brucella pinnipedialis M292/94/1] gi|265998027|ref|ZP_06110584.1| arginyl-tRNA synthetase [Brucella ceti M490/95/1] gi|294852229|ref|ZP_06792902.1| arginyl-tRNA synthetase [Brucella sp. NVSL 07-0026] gi|38258388|sp|Q8G146|SYR_BRUSU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|189083524|sp|A9MAQ0|SYR_BRUC2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|23347691|gb|AAN29805.1| arginyl-tRNA synthetase [Brucella suis 1330] gi|161335648|gb|ABX61953.1| arginyl-tRNA synthetase [Brucella canis ATCC 23365] gi|225617370|gb|EEH14415.1| arginyl-tRNA synthetase [Brucella ceti str. Cudo] gi|255999465|gb|ACU47864.1| arginyl-tRNA synthetase [Brucella microti CCM 4915] gi|260156084|gb|EEW91164.1| arginyl-tRNA synthetase [Brucella suis bv. 4 str. 40] gi|260920646|gb|EEX87299.1| arginyl-tRNA synthetase [Brucella ceti B1/94] gi|260923856|gb|EEX90424.1| arginyl-tRNA synthetase [Brucella ceti M13/05/1] gi|261294424|gb|EEX97920.1| arginyl-tRNA synthetase [Brucella ceti M644/93/1] gi|261296750|gb|EEY00247.1| arginyl-tRNA synthetase [Brucella pinnipedialis B2/94] gi|261303403|gb|EEY06900.1| arginyl-tRNA synthetase [Brucella pinnipedialis M163/99/10] gi|261738064|gb|EEY26060.1| arginyl-tRNA synthetase [Brucella sp. F5/99] gi|261741947|gb|EEY29873.1| arginyl-tRNA synthetase [Brucella suis bv. 5 str. 513] gi|262552495|gb|EEZ08485.1| arginyl-tRNA synthetase [Brucella ceti M490/95/1] gi|264660759|gb|EEZ31020.1| arginyl-tRNA synthetase [Brucella pinnipedialis M292/94/1] gi|294820818|gb|EFG37817.1| arginyl-tRNA synthetase [Brucella sp. NVSL 07-0026] Length = 585 Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/590 (56%), Positives = 435/590 (73%), Gaps = 11/590 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF +R+K L++ID K K ++ L RI +E PRD +HG ++TNAAM+LS+ +G Sbjct: 1 MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A I +K D DV+SV +AG GFINL L SY ++ L ++ G ++GR+ +G Sbjct: 61 NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL + ++P G YPG YL VG+ELA ++ ++LL PE + L IVKD ++ Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL ALN+ HD+F SE H IR+ I++L +G+VY+G LPPPK + Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RKN LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D +D D Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479 Query: 480 FPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + S F D SE+ L+ LAEYPR+IE+A I QEP++LAFYLYDLAS FH Sbjct: 480 -----VAMGSHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQ 534 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W+ G ENP LRF++ N+ L++ RL LV V+ ++ SGL IIG ++P EM Sbjct: 535 WNRGTENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584 >gi|163843148|ref|YP_001627552.1| arginyl-tRNA synthetase [Brucella suis ATCC 23445] gi|189083525|sp|B0CLK2|SYR_BRUSI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|163673871|gb|ABY37982.1| arginyl-tRNA synthetase [Brucella suis ATCC 23445] Length = 585 Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/590 (56%), Positives = 435/590 (73%), Gaps = 11/590 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF +R+K L++ID K K ++ L RI +E PRD +HG ++TNAAM+LS+ +G Sbjct: 1 MNIFADFDARIKKTLQDIDLKQKDGGELDLSRIGVEPPRDASHGDIATNAAMLLSKAVGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A I +K D DV+SV +AG GFINL L SY ++ L ++ G ++GR+ +G Sbjct: 61 NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL + ++P G YPG YL VG+ELA ++ ++LL PE + L IVKD ++ Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL ALN+ HD+F SE H IR+ I++L +G+VY+G LPPPK + Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RKN LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D +D D Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479 Query: 480 FPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + S F D SE+ L+ LAEYPR+IE+A I QEP++LAFYLYDLAS FH Sbjct: 480 -----VAMGSHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQ 534 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W+ G ENP LRF++ N+ L++ RL LV V+ ++ SGL IIG ++P EM Sbjct: 535 WNRGTENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584 >gi|225852389|ref|YP_002732622.1| arginyl-tRNA synthetase [Brucella melitensis ATCC 23457] gi|256264113|ref|ZP_05466645.1| arginyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9] gi|254782946|sp|C0RIL0|SYR_BRUMB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|225640754|gb|ACO00668.1| arginyl-tRNA synthetase [Brucella melitensis ATCC 23457] gi|263094331|gb|EEZ18176.1| arginyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9] gi|326408895|gb|ADZ65960.1| arginyl-tRNA synthetase [Brucella melitensis M28] gi|326538613|gb|ADZ86828.1| arginyl-tRNA synthetase [Brucella melitensis M5-90] Length = 585 Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/590 (56%), Positives = 435/590 (73%), Gaps = 11/590 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF +R+K L++ID K K ++ L RI +E PRD +HG ++TNAAM+LS+ +G Sbjct: 1 MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A I +K D DV+SV +AG GFINL L SY ++ L ++ G ++GR+ +G Sbjct: 61 NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL + ++P G YPG YL VG+ELA ++ ++LL PE + L IVKD ++ Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL ALN+ HD+F SE H IR+ I++L +G+VY+G LPPPK + Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RKN LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D +D D Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479 Query: 480 FPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + S F D SE+ L+ LAEYPR+IE+A I QEP++LAFYLYDLAS FH Sbjct: 480 -----VAMGSHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQ 534 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W+ G ENP LRF++ N+ L++ RL LV V+ ++ SGL IIG ++P EM Sbjct: 535 WNRGAENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584 >gi|153009679|ref|YP_001370894.1| arginyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188] gi|166232816|sp|A6X1G1|SYR_OCHA4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|151561567|gb|ABS15065.1| arginyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188] Length = 585 Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust. Identities = 331/590 (56%), Positives = 434/590 (73%), Gaps = 11/590 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF +R+K L++ID K K + L RI +E PRD +HG ++TNAAM+LS+ +G Sbjct: 1 MNIFADFDARIKKTLQDIDLKPKDGGDLDLSRIGVEPPRDSSHGDIATNAAMVLSKAVGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A I + D DV++V +AG GFINL L +Y ++ LS+++ G ++GR+ +G Sbjct: 61 NPRELAGRIAEALASDADVETVDVAGPGFINLRLKATYWQRELSAMLNEGKDFGRSKLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G+KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA Sbjct: 121 GSKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL N ++P G YPG YL VG+ELA ++ S+LL PE + L +VKD ++ Sbjct: 181 SVMLRYREALGENIGEIPSGLYPGDYLVPVGQELAKEFGSKLLEMPEAEALALVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL ALN+ HD+F SE H IR+ I++L +G+VY+G LPPPK + Sbjct: 241 AMMAMIRADLDALNVHHDVFFSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDG++TYFA D+AYFK KY+RGF+ MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGAFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+RDG P++MSKR+G+FITLR VVDEVG Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRDGEPVRMSKRSGEFITLRDVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RKN LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D D D Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLADLDR 479 Query: 480 FPRNVIPQESEFDT----SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + + FD SE+ L+ LAEYPR+IE A I QEP++LAFYLYDLAS FH Sbjct: 480 -----VGMAAHFDKLTDESEIALVRKLAEYPRLIEAAAIHQEPHRLAFYLYDLASAFHSQ 534 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W+ G ENP LRF++ N+ L++ RL LV V+ ++ SGL IIG ++P EM Sbjct: 535 WNRGTENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584 >gi|17987372|ref|NP_540006.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|256044550|ref|ZP_05447454.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|260563903|ref|ZP_05834389.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|265990976|ref|ZP_06103533.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|23822196|sp|Q8YGR9|SYR_BRUME RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|17983059|gb|AAL52270.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|260153919|gb|EEW89011.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|263001760|gb|EEZ14335.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1] Length = 585 Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/590 (56%), Positives = 434/590 (73%), Gaps = 11/590 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF +R+K L++ID K K ++ L RI +E PRD +HG ++TNAAM+LS+ +G Sbjct: 1 MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A I +K D DV+SV +AG GFINL L SY ++ L ++ G ++GR+ +G Sbjct: 61 NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL + ++P G YPG YL VG+ELA ++ ++LL PE + L IVKD ++ Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL ALN+ HD+F SE H IR+ I++L +G+VY+G LPPPK + Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+ GF+ MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDHGFNEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RKN LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D +D D Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479 Query: 480 FPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + S F D SE+ L+ LAEYPR+IE+A I QEP++LAFYLYDLAS FH Sbjct: 480 -----VAMGSHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQ 534 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W+ G ENP LRF++ N+ L++ RL LV V+ ++ SGL IIG ++P EM Sbjct: 535 WNRGAENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584 >gi|306840369|ref|ZP_07473136.1| arginyl-tRNA synthetase [Brucella sp. BO2] gi|306289654|gb|EFM60854.1| arginyl-tRNA synthetase [Brucella sp. BO2] Length = 585 Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/590 (56%), Positives = 434/590 (73%), Gaps = 11/590 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF +R+K L++ID K K ++ L RI +E PRD +HG ++TNAAM+LS+ +G Sbjct: 1 MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A I +K D DV+SV +AG GFINL L SY ++ L ++ G ++GR+ +G Sbjct: 61 NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL + ++P G YPG YL VG+ LA ++ ++LL PE + L IVKD ++ Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVPVGQALAGEFGTKLLEMPESEALAIVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL ALN+ HD+F SE H IR+ I++L +G+VY+G LPPPK + Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHLDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RKN LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D +D D Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479 Query: 480 FPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + S F D SE+ L+ LAEYPR+IE+A I QEP++LAFYLYDLAS FH Sbjct: 480 -----VAMGSHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQ 534 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W+ G ENP LRF++ N+ L++ RL LV V+ ++ SGL IIG ++P EM Sbjct: 535 WNRGTENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584 >gi|62289822|ref|YP_221615.1| arginyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941] gi|82699747|ref|YP_414321.1| arginyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308] gi|189024063|ref|YP_001934831.1| arginyl-tRNA synthetase [Brucella abortus S19] gi|237815307|ref|ZP_04594305.1| arginyl-tRNA synthetase [Brucella abortus str. 2308 A] gi|254689127|ref|ZP_05152381.1| arginyl-tRNA synthetase [Brucella abortus bv. 6 str. 870] gi|254693610|ref|ZP_05155438.1| arginyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya] gi|254697260|ref|ZP_05159088.1| arginyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|254730159|ref|ZP_05188737.1| arginyl-tRNA synthetase [Brucella abortus bv. 4 str. 292] gi|256257376|ref|ZP_05462912.1| arginyl-tRNA synthetase [Brucella abortus bv. 9 str. C68] gi|260545431|ref|ZP_05821172.1| arginyl-tRNA synthetase [Brucella abortus NCTC 8038] gi|260754626|ref|ZP_05866974.1| arginyl-tRNA synthetase [Brucella abortus bv. 6 str. 870] gi|260757849|ref|ZP_05870197.1| arginyl-tRNA synthetase [Brucella abortus bv. 4 str. 292] gi|260761672|ref|ZP_05874015.1| arginyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|260883653|ref|ZP_05895267.1| arginyl-tRNA synthetase [Brucella abortus bv. 9 str. C68] gi|261213876|ref|ZP_05928157.1| arginyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya] gi|297248226|ref|ZP_06931944.1| arginyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196] gi|75496922|sp|Q57DN0|SYR_BRUAB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|109894975|sp|Q2YNJ9|SYR_BRUA2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|238689361|sp|B2S5B0|SYR_BRUA1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|62195954|gb|AAX74254.1| ArgS, arginyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941] gi|82615848|emb|CAJ10852.1| Arginyl-tRNA synthetase, class Ic:Aminoacyl-tRNA synthetase, class I:Arginyl tRNA synthetase N-terminal domain [Brucella melitensis biovar Abortus 2308] gi|189019635|gb|ACD72357.1| arginyl-tRNA synthetase [Brucella abortus S19] gi|237790144|gb|EEP64354.1| arginyl-tRNA synthetase [Brucella abortus str. 2308 A] gi|260096838|gb|EEW80713.1| arginyl-tRNA synthetase [Brucella abortus NCTC 8038] gi|260668167|gb|EEX55107.1| arginyl-tRNA synthetase [Brucella abortus bv. 4 str. 292] gi|260672104|gb|EEX58925.1| arginyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|260674734|gb|EEX61555.1| arginyl-tRNA synthetase [Brucella abortus bv. 6 str. 870] gi|260873181|gb|EEX80250.1| arginyl-tRNA synthetase [Brucella abortus bv. 9 str. C68] gi|260915483|gb|EEX82344.1| arginyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya] gi|297175395|gb|EFH34742.1| arginyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196] Length = 585 Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/590 (56%), Positives = 433/590 (73%), Gaps = 11/590 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF +R+K ++ID K K ++ L RI +E PRD +HG ++TNAAM+LS+ +G Sbjct: 1 MNIFADFDARIKKTFQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A I +K D DV+SV +AG GFINL L SY ++ L ++ G ++GR+ +G Sbjct: 61 NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL + ++P G YPG YL VG+ELA ++ ++LL PE + L IVKD ++ Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL ALN+ HD+F SE H IR+ I++L +G+VY+G LPPPK + Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGRLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+ YFK KY+RGF+ MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVTYFKDKYDRGFNEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RKN LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D +D D Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479 Query: 480 FPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + S F D SE+ L+ LAEYPR+IE+A I QEP++LAFYLYDLAS FH Sbjct: 480 -----VAMGSHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQ 534 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W+ G ENP LRF++ N+ L++ RL LV V+ ++ SGL IIG ++P EM Sbjct: 535 WNRGAENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584 >gi|254718981|ref|ZP_05180792.1| arginyl-tRNA synthetase [Brucella sp. 83/13] gi|265983971|ref|ZP_06096706.1| arginyl-tRNA synthetase [Brucella sp. 83/13] gi|306837329|ref|ZP_07470210.1| arginyl-tRNA synthetase [Brucella sp. NF 2653] gi|306843774|ref|ZP_07476372.1| arginyl-tRNA synthetase [Brucella sp. BO1] gi|264662563|gb|EEZ32824.1| arginyl-tRNA synthetase [Brucella sp. 83/13] gi|306275852|gb|EFM57568.1| arginyl-tRNA synthetase [Brucella sp. BO1] gi|306407581|gb|EFM63779.1| arginyl-tRNA synthetase [Brucella sp. NF 2653] Length = 585 Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/590 (56%), Positives = 434/590 (73%), Gaps = 11/590 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF +R+K L++ID K K ++ L RI +E PRD +HG ++TNAAM+LS+ +G Sbjct: 1 MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A I +K D DV+SV +AG GFINL L SY ++ L ++ G ++GR+ +G Sbjct: 61 NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL + ++P G YPG YL VG+ LA ++ ++LL PE + L IVKD ++ Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVPVGQALAGEFGTKLLEMPEAEALAIVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL ALN+ HD+F SE H IR+ I++L +G+VY+G LPPPK + Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHLDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RKN LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D +D D Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479 Query: 480 FPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + S F D SE+ L+ LAEYPR+IE+A I QEP++LAFYLYDLAS FH Sbjct: 480 -----VAMGSHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQ 534 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W+ G ENP LRF++ N+ L++ RL LV V+ ++ SGL IIG ++P EM Sbjct: 535 WNRGTENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584 >gi|256113415|ref|ZP_05454264.1| arginyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether] gi|265994813|ref|ZP_06107370.1| arginyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether] gi|262765926|gb|EEZ11715.1| arginyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether] Length = 585 Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/590 (56%), Positives = 434/590 (73%), Gaps = 11/590 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF +R+K L++ID K K ++ L RI +E PRD +HG ++TNAAM+LS+ +G Sbjct: 1 MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A I +K D DV+SV +AG GFINL L SY ++ L ++ G ++GR+ +G Sbjct: 61 NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL + ++P G YPG YL VG+ELA ++ ++LL PE + L IVKD ++ Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL ALN+ HD+F SE H IR+ I++L +G+VY+G LPPPK + Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RKN LDFDF KV E SK+NPVFYVQYA ARC S+FRQA D +D D Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEPSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479 Query: 480 FPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + S F D SE+ L+ LAEYPR+IE+A I QEP++LAFYLYDLAS FH Sbjct: 480 -----VAMGSHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQ 534 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W+ G ENP LRF++ N+ L++ RL LV V+ ++ SGL IIG ++P EM Sbjct: 535 WNRGAENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584 >gi|148560686|ref|YP_001258851.1| arginyl-tRNA synthetase [Brucella ovis ATCC 25840] gi|166232762|sp|A5VQ54|SYR_BRUO2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|148371943|gb|ABQ61922.1| arginyl-tRNA synthetase [Brucella ovis ATCC 25840] Length = 585 Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/590 (56%), Positives = 432/590 (73%), Gaps = 11/590 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF +R+K L++ID K K ++ L RI +E PRD +HG ++TNAAM+LS+ +G Sbjct: 1 MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A I +K D DV+SV +AG GFINL L SY ++ L ++ G ++GR+ +G Sbjct: 61 NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL + ++P G YPG YL VG+ELA ++ ++LL PE + L IVKD ++ Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL ALN+ HD+F SE H IR+ I++L +G+VY+G LPPPK + Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + D +Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D Sbjct: 301 GDWE-DCEQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P +MSKRAG+FITLR VVDEVG Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPARMSKRAGEFITLRDVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RKN LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D +D D Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479 Query: 480 FPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + S F D SE+ L+ LAEYPR+IE+A I QEP++LAFYLYDLAS FH Sbjct: 480 -----VAMGSHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQ 534 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W+ G ENP LRF++ N+ L++ RL LV V+ ++ SGL IIG ++P EM Sbjct: 535 WNRGTENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584 >gi|110634164|ref|YP_674372.1| arginyl-tRNA synthetase [Mesorhizobium sp. BNC1] gi|123353590|sp|Q11HB8|SYR_MESSB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|110285148|gb|ABG63207.1| arginyl-tRNA synthetase [Chelativorans sp. BNC1] Length = 585 Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/586 (54%), Positives = 425/586 (72%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADFS R+ N +K ++ K K ++ L R+ +E PRD +HG ++TNAAM+LS+ +G Sbjct: 1 MNIFADFSDRIINAVKALELKPKEGGELDLSRVAVEPPRDPSHGDIATNAAMVLSKAVGE 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P + E + A + DPDV +AG GF+NL L + L +++ +YGR+ +G Sbjct: 61 NPRALGERLAAALAEDPDVAEASVAGPGFVNLRLGNGFWHARLGEMLLLAGDYGRSKMGN 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD L++L+AF+GY+VTREYYINDAGAQI+ L Sbjct: 121 GHKVNVEYVSANPTGPMHVGHCRGAVVGDALSNLLAFAGYDVTREYYINDAGAQIDVLGR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL + +PEG YPG YLK VGK LAD+Y ++LL P E+ L I KD ++ Sbjct: 181 SVLMRYREALGEDIGQIPEGLYPGDYLKPVGKALADEYGTKLLERPAEEALKIAKDTAID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL ALN+ HD+F SE H G+ IR I++L +G+VY+G LPPPK + Sbjct: 241 AMMAMIREDLAALNVHHDVFFSERSLHAGNGGTIRSAINDLTLKGHVYKGKLPPPKGQVL 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDG++TYFAAD+AY K KY RGF+++IYV+G+D Sbjct: 301 EDWE-DREQTLFRSTDVGDDIDRPLIKSDGTFTYFAADVAYMKDKYSRGFEHLIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEA+A A+SE K + VLLC+LV+L+R+G P++MSKRAG+F+TLR V+DEVG Sbjct: 360 HGGYVKRLEALARAISEGKLHLTVLLCQLVKLFRNGEPVRMSKRAGEFVTLRDVIDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+VRFMML+RK+ LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA + FD Sbjct: 420 DAVRFMMLYRKSDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQASEQLNVRKFDR 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + D E+ LI LAEYPR+IE+A A EP++LAFYLY+LA+ FH W+ G Sbjct: 480 EAMKAALHRLD-DPGEIALIRKLAEYPRLIESAAQALEPHRLAFYLYELANQFHVQWNRG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 E RLRFV+ N+ +LT RL LV AV ++ SGL ++G ++P EM Sbjct: 539 SETDRLRFVKVNDPELTHARLGLVQAVCDVVRSGLALVGADAPEEM 584 >gi|319783184|ref|YP_004142660.1| arginyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169072|gb|ADV12610.1| arginyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 585 Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust. Identities = 312/588 (53%), Positives = 427/588 (72%), Gaps = 7/588 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVE-KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF++R+ ++ +D K K L RI +E PRD +HG L+TNAAM+L++P G Sbjct: 1 MNIFADFTARIIKAVEALDLKDKDGISPDLSRIAVEPPRDASHGDLATNAAMVLAKPTGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +AE + ++ D DV + +AG GF+NL L + + L++++ G YGR+ +G Sbjct: 61 NPRALAERLAQALRDDKDVAATEVAGPGFVNLRLKDGFWQTHLTALLGEGRNYGRSTVGG 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G K N+E+VSANPTGPMHVGHCR AVVGD LA+LMAF+GY+VT+EY INDAG+QI+ L Sbjct: 121 GRKTNVEYVSANPTGPMHVGHCRGAVVGDALANLMAFAGYDVTKEYVINDAGSQIDVLGR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY++AL ++ ++P G YPG YL VG+ L ++ LL P+++ L IVKD ++ Sbjct: 181 SAFLRYREALGDDIGEIPAGLYPGDYLVPVGQALVAEFGRSLLQMPDDEALAIVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL LN+ HD+F SE H + IR I++L +G++Y+G LPPPK + Sbjct: 241 AMMAMIREDLAMLNVHHDVFFSERTLHADNARKIRSAINDLTLKGHIYKGKLPPPKGEKP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + DR+Q LFRST VGDD+DR L+KSDGS+TYFAAD+AY K K +RGF ++IYV+G+D Sbjct: 301 DDWE-DREQTLFRSTAVGDDMDRALVKSDGSFTYFAADVAYLKDKVDRGFVDLIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEA+A A++ ++ ++ VLLC LV+L+R+G P++MSKR+GDF+TLR VV+EVG Sbjct: 360 HGGYVKRLEALARAIAGEEVKLTVLLCNLVKLFREGEPVRMSKRSGDFVTLREVVEEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D++RFMML+RKN LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA + + +FD Sbjct: 420 DAIRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQASEQLGEANFD- 478 Query: 480 FPRNVIPQESEF--DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 RN + + D E+ LI LAEYPR+IE+A +A EP++LAFYLYDLAS FHGHW+ Sbjct: 479 --RNSLASAAALLTDEGEIGLIRKLAEYPRLIESAALALEPHRLAFYLYDLASSFHGHWN 536 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G +NP LRFV+ N+R+LT RL LV AV+ ++ SGL +IG +P EM Sbjct: 537 RGTDNPDLRFVKVNDRQLTHARLGLVQAVSDVLTSGLTLIGAAAPTEM 584 >gi|319898837|ref|YP_004158930.1| Arginyl-tRNA synthetase [Bartonella clarridgeiae 73] gi|319402801|emb|CBI76352.1| Arginyl-tRNA synthetase [Bartonella clarridgeiae 73] Length = 588 Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/591 (54%), Positives = 431/591 (72%), Gaps = 10/591 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58 M +F +F +++K ++ D K K KILD +IV + PRD HG LSTNAAM+L++ +G Sbjct: 1 MNVFKNFENKIKKLIELSDIKEK-NGKILDLSKIVADPPRDSLHGDLSTNAAMVLAKSVG 59 Query: 59 LDPLTIAELIVARIKIDPD---VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115 L+P +AE I+ + D +D + +AG GFIN+ + S+ ++ L +++ GI YGR Sbjct: 60 LNPRALAEKIIELLNNDQSFDYIDHINVAGPGFINIKFTQSFWQETLKTMIEKGISYGRT 119 Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175 IG+G KVNIE+VSANPTGPMHVGHCR AV+GD LA+L+ F+G+EVT+EYYINDAG QI Sbjct: 120 EIGQGKKVNIEYVSANPTGPMHVGHCRGAVIGDVLANLLQFTGHEVTKEYYINDAGEQIK 179 Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235 LA SV RY++AL S++PEG YPG YL +G+ LA K+ +LL +E+ L IVK+ Sbjct: 180 ILAHSVMLRYREALGQTISEIPEGLYPGEYLIPLGQSLAQKFGEKLLIIDQEEALSIVKE 239 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 +++ +MM IIR DL ALNI HD+F SE + + IR I++L GY+Y+G LPPPK Sbjct: 240 HAIDSMMAIIRKDLAALNIYHDVFFSERTLYENNAQAIRSTINDLTLSGYIYKGTLPPPK 299 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 + + + R+Q LFRST +GDD DR L+KSDGSYTYFAAD+AYF+ K+ R FD MIY+ Sbjct: 300 GQNIEDWE-PREQTLFRSTDIGDDQDRALIKSDGSYTYFAADVAYFRDKFNRHFDEMIYI 358 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 +G+DH+GYVKRLEAVA A+S KA + VLLC+LV+L+RDG P++MSKRAG F+TLR VV+ Sbjct: 359 LGADHTGYVKRLEAVAKAISGNKATLTVLLCQLVKLFRDGQPVRMSKRAGSFVTLRDVVE 418 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 EVG D VRFMML+RK LDFDF KV EQSK+NP+FYVQYA ARC SIFRQ ++ F L Sbjct: 419 EVGYDPVRFMMLYRKCEAPLDFDFAKVTEQSKDNPIFYVQYANARCHSIFRQTQESF--L 476 Query: 476 DFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 +L +I + D SE+ LI LAEYPR+IE A I +EP++LAFYLYDLAS FHG Sbjct: 477 TENLSNDTMIAHLDQLVDESEILLIRKLAEYPRIIEQAVIHKEPHRLAFYLYDLASHFHG 536 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 HW+ G +NP LRF++ +N++L++ RL L+ A+ +I++SGL IIGV++P EM Sbjct: 537 HWNKGNDNPNLRFIKTDNKELSLARLGLIQAIINILSSGLTIIGVKAPTEM 587 >gi|307946867|ref|ZP_07662202.1| arginyl-tRNA synthetase [Roseibium sp. TrichSKD4] gi|307770531|gb|EFO29757.1| arginyl-tRNA synthetase [Roseibium sp. TrichSKD4] Length = 589 Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust. Identities = 316/593 (53%), Positives = 428/593 (72%), Gaps = 13/593 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCKIK-VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F +FS R+K+ LK +D + K L R+ +E PRD AHG L+TNAAM+LS+ +G+ Sbjct: 1 MNIFTEFSERVKDMLKGLDLQTKDGAAPDLSRVTVESPRDPAHGDLATNAAMVLSKQVGM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +AE + +K DPDV V +AG GFIN+ L+ S +K+L S++ G ++GR+ G Sbjct: 61 KPRDLAEKLAEALKNDPDVQDVDVAGPGFINMRLAHSVWQKVLKSVLEQGQDFGRSDFGG 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G K N+E+VSANPTGPMHVGH R AVVGD LA+L+AF+GY+VTREYYINDAG+QI+TLA Sbjct: 121 GKKTNVEYVSANPTGPMHVGHTRGAVVGDVLANLLAFAGYDVTREYYINDAGSQIDTLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY++AL + ++P G YPG YLK VG++LA Y L + PEE+WLP+VK S+ Sbjct: 181 SAFLRYREALGEDIGEIPAGLYPGDYLKPVGEKLAADYKESLKDKPEEEWLPVVKGLSIS 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFH---RGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 MM +IR+DL +LN+ HD+F SE H G+ S I +++D L + VY+G LPPPK Sbjct: 241 MMMDMIREDLASLNVHHDVFFSERTLHSRGEGNVSKIDEMLDALRNRDLVYQGTLPPPKG 300 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + + DR+Q LFR++ GDD DR L KSDGSYTYFAAD+AYF+ K++R F MIYV+ Sbjct: 301 QVPDDWE-DREQTLFRASDYGDDTDRALKKSDGSYTYFAADVAYFRDKFQRDFKEMIYVL 359 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G+DHSGY KRL+AV AVS+ +A++ V C+LV+L+R G P KMSKR+GDFITLR VVDE Sbjct: 360 GADHSGYAKRLQAVGKAVSDSQAEVVVRFCQLVKLFRGGEPFKMSKRSGDFITLRDVVDE 419 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG D VRFMML+RKN LDFDF KV EQSK+NPVFYVQY +ARCRS+ RQA + + Sbjct: 420 VGRDPVRFMMLYRKNDAPLDFDFQKVTEQSKDNPVFYVQYGHARCRSVMRQAAEELSGVA 479 Query: 477 FDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 D + E++F D+ EL+L+ +A +P+++E A EP+++AFYL+DLAS Sbjct: 480 ID----DKALAEADFSALTDSGELELLAKMAVWPKIVEAAAETHEPHRIAFYLHDLASSL 535 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 HGHW+ G+E P+LRF+ A++ KLT+ RL +V AV+S+I SGL+++GV++P EM Sbjct: 536 HGHWNRGKELPQLRFINADDTKLTVARLAMVRAVSSVIASGLSVLGVDAPEEM 588 >gi|260459783|ref|ZP_05808037.1| arginyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075] gi|259034585|gb|EEW35842.1| arginyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075] Length = 585 Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust. Identities = 315/588 (53%), Positives = 422/588 (71%), Gaps = 7/588 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVE-KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF++R+ ++ +D K K L RI +E PRD +HG L+TNAAM+L++P G Sbjct: 1 MNIFADFTARVIKAVEALDLKDKDGVSPDLSRIAVEPPRDASHGDLATNAAMVLAKPTGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A+ + ++ D DV + +AG GF+NL L + + LS+++ G YGR+ IG Sbjct: 61 NPRVLADRLALVLRDDVDVAAAEVAGPGFVNLRLKDGFWQAHLSALLGEGRNYGRSTIGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G K N+E+VSANPTGPMHVGHCR AVVGD LA++MAF+GY+VT+EY INDAG+QI+ L Sbjct: 121 GRKTNVEYVSANPTGPMHVGHCRGAVVGDALANIMAFAGYDVTKEYVINDAGSQIDVLGR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY +AL + ++P G YPG YL VG+ L ++ LL P+++ L IVKD ++ Sbjct: 181 SAFLRYSEALGEDIGEIPPGLYPGDYLVPVGEGLVKEFGRSLLQMPDDEALAIVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL LN+ HD+F SE H + IR I++L +G++Y+G LPPPK + Sbjct: 241 AMMAMIREDLALLNVHHDVFFSERTLHADNARKIRSAINDLTLKGHIYKGKLPPPKGEKP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + DR+Q LFRST VGDD+DR L+KSDGS+TYFAAD+AY K K +RGF ++IYV+G+D Sbjct: 301 DDWE-DREQTLFRSTAVGDDMDRALVKSDGSFTYFAADVAYLKDKVDRGFVDLIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEA+A A++ ++ VLLC LV+L+RDG P++MSKR+GDF+TLR VV+EVG Sbjct: 360 HGGYVKRLEALARAIAGDDVKLTVLLCNLVKLFRDGEPVRMSKRSGDFVTLREVVEEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D +RFMML+RKN LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA + + +FD Sbjct: 420 DPIRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQASEQLGEANFD- 478 Query: 480 FPRN--VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 RN V S D E+ LI LAEYPR+IE+A +A EP++LAFYLYDLAS FHGHW+ Sbjct: 479 --RNSLVAAVTSLTDEGEIGLIRKLAEYPRLIESAALALEPHRLAFYLYDLASSFHGHWN 536 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G +NP LRFV+ N+R+LT RL LV AV+ ++ SGL +IG +P EM Sbjct: 537 RGTDNPDLRFVKVNDRELTHARLGLVQAVSDVLTSGLTLIGAAAPTEM 584 >gi|114707222|ref|ZP_01440120.1| arginyl-tRNA synthetase [Fulvimarina pelagi HTCC2506] gi|114537418|gb|EAU40544.1| arginyl-tRNA synthetase [Fulvimarina pelagi HTCC2506] Length = 582 Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust. Identities = 315/589 (53%), Positives = 420/589 (71%), Gaps = 12/589 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +FADF R++ + + I L+R+ +E PRD AHG L++NAAM+L++P+GL Sbjct: 1 MNMFADFEMRVRAAVSTVLTDIGHAVPDLERVTVEPPRDPAHGDLASNAAMVLAKPMGLK 60 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE I ++ D D+ SV IAG GFIN+ L+P++ + L ++ + ++YGR G Sbjct: 61 PRDLAEKIAEKLGADEDIASVEIAGPGFINMRLAPAFWPRHLREMLNARLDYGRG-APTG 119 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 K+N+E+VSANPTGPMHVGHCR AVVGD LA L+AFSG EVT+EYY+NDAG QI LA S Sbjct: 120 RKINVEYVSANPTGPMHVGHCRGAVVGDALARLLAFSGEEVTKEYYVNDAGEQIGVLARS 179 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 F RY++AL +PEG YPG YLK +G+ LAD++ L + P+ +W PIV+D +++A Sbjct: 180 AFLRYREALGEKIGMIPEGLYPGDYLKPLGRSLADEFGDSLRDKPQAEWEPIVRDRAIEA 239 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM +IR+DLK L I+H++F SE H D I + I NL +GYVY G LPPPK K + Sbjct: 240 MMDMIREDLKTLGIEHEVFFSERTLHDADGGKIANAIANLEEKGYVYRGALPPPKGKPQE 299 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + DR+Q L RST VGDD DRPL+KS+G YTYFAAD+AYF+ KYERGF MI+V+G+DH Sbjct: 300 DWE-DREQTLLRSTAVGDDQDRPLVKSNGLYTYFAADVAYFRDKYERGFSEMIFVLGADH 358 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 SGYVKRLEAVA A+S A+ +LC+LV+LYRDG P+KMSKR+GDF+TL VV+EVG D Sbjct: 359 SGYVKRLEAVAKAISGGTAKATAILCQLVKLYRDGAPVKMSKRSGDFVTLAEVVEEVGRD 418 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 VRFMML+RK+ LDFDF KV EQSK+NPVFYVQYA+AR SIFRQA++ D+ Sbjct: 419 PVRFMMLYRKSDAPLDFDFQKVTEQSKDNPVFYVQYAHARAHSIFRQARETGFDVSIG-- 476 Query: 481 PRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 P E++ D E LI LAE+PRV+++A A+EP++LAFYLYDLAS FH + Sbjct: 477 ----APIEADLNLLRDEGETGLIAKLAEFPRVVQSAANAREPHRLAFYLYDLASAFHAQY 532 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + G++ P+LRFV + + ++ RL LV AVA+++ SGL+IIG ++P EM Sbjct: 533 NRGKDLPQLRFVNPSAPESSLARLALVDAVATVVRSGLDIIGAQAPEEM 581 >gi|13471188|ref|NP_102757.1| arginyl-tRNA synthetase [Mesorhizobium loti MAFF303099] gi|23822203|sp|Q98LC0|SYR_RHILO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|14021932|dbj|BAB48543.1| arginyl-tRNA synthetase [Mesorhizobium loti MAFF303099] Length = 585 Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust. Identities = 316/586 (53%), Positives = 422/586 (72%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVE-KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF++R+ ++ +D K K L RI +E PRD +HG L+TNAAM+L++P G Sbjct: 1 MNIFADFTARVTKAVEALDLKDKDGISPDLSRIAVEPPRDASHGDLATNAAMVLAKPTGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +AE + ++ D DV + +AG GF+NL L + + LS+++ G YGR+ +G Sbjct: 61 NPRALAEKLALALRDDKDVAAAEVAGPGFVNLRLKDGFWQAHLSALLGDGRNYGRSTVGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G K N+E+VSANPTGPMHVGHCR AVVGD LA+LMAF+GY+VT+EY INDAG QI+ L Sbjct: 121 GRKTNVEYVSANPTGPMHVGHCRGAVVGDALANLMAFAGYDVTKEYVINDAGGQIDVLGR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL + ++P G YPG YL +G+ LA ++ LL PE++ L IVKD ++ Sbjct: 181 SVILRYREALGDEIGEIPPGLYPGDYLVPLGQALAKEFGHGLLQMPEDEALAIVKDRAID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IRDDL LN+ HD+F SE H + IR I++L +G++Y+G LPPPK + Sbjct: 241 AMMAMIRDDLALLNVHHDVFFSERTLHADNARKIRSAINDLTLKGHIYKGKLPPPKGEKP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + DR+Q LFRST VGDD+DR L+KSDGS+TYFAAD+AY K K +RGF ++IYV+G+D Sbjct: 301 DDWE-DREQTLFRSTAVGDDMDRALVKSDGSFTYFAADVAYLKDKVDRGFVDLIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEA+A A++ + ++ VLLC LV+LYRDG PI+MSKR+GDF+TLR VV+EVG Sbjct: 360 HGGYVKRLEALARAIAGDEVKLTVLLCNLVKLYRDGEPIRMSKRSGDFVTLREVVEEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D++RFMML+RK+ LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA + + +FD Sbjct: 420 DAIRFMMLYRKSDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQASEQLGEANFDR 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 S D E+ LI LAEYPR+IE+A +A EP++LAFYLYDLAS FHGHW+ G Sbjct: 480 -KSLAAAAASLTDEGEIGLIRKLAEYPRLIESAALALEPHRLAFYLYDLASSFHGHWNRG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +NP LRFV+ N+R+LT RL LV AV+ ++ SGL +IG +P EM Sbjct: 539 TDNPDLRFVKVNDRQLTHARLGLVQAVSDVLTSGLTLIGAAAPTEM 584 >gi|121602184|ref|YP_989046.1| arginyl-tRNA synthetase [Bartonella bacilliformis KC583] gi|166232758|sp|A1USU3|SYR_BARBK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|120614361|gb|ABM44962.1| arginyl-tRNA synthetase [Bartonella bacilliformis KC583] Length = 585 Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust. Identities = 316/589 (53%), Positives = 424/589 (71%), Gaps = 9/589 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F +F ++K LKE D K K + + L +I ++ PRD HG LSTNA+M+L++ +GL Sbjct: 1 MNVFKNFEQKIKKSLKESDIKGKNGENLDLSKITVDPPRDSLHGDLSTNASMVLAKSVGL 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P T+AE I+A +K DP +D + +AG GFIN+ L+ S+ +L ++ SG +YGR IG+ Sbjct: 61 NPRTLAEKIIALLKDDPSIDHLEVAGSGFINIKLTKSFWHDVLKLMITSGTDYGRTQIGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY VT+EYYINDAG QI LA Sbjct: 121 GKQVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLQFAGYNVTKEYYINDAGKQIEILAA 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL + +PEG YPG YL +G+ L ++ +LL EK L IVK+ S+ Sbjct: 181 SVLLRYREALGETINKIPEGLYPGEYLIPLGQSLVQEFGDKLLTMDNEKALSIVKERSID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL LNI HD+F SE + + IR+ I++L GYVY+G L PPK +T Sbjct: 241 AMMTMIRQDLATLNIHHDVFFSERMLYMNNAQAIRNTINDLTLNGYVYKGKLSPPKGQTL 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + +Q LFRST VGDD DR L+KSDGSYTYFAAD+AYF+ K+ R FD MIYV+G+D Sbjct: 301 EDWE-PHEQTLFRSTDVGDDQDRVLIKSDGSYTYFAADVAYFRDKFHRHFDEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H+GYVKRLEAVA A+S KA++ LC+LV+L+R+G P++MSKR G FITLR VV EVG Sbjct: 360 HAGYVKRLEAVAKAISGNKAKLTAFLCQLVKLFRNGHPVRMSKREGSFITLRDVVKEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RK LDFD KV EQSK+NP+FYVQYA+ARC S+FRQA++ +L + Sbjct: 420 DPVRFMMLYRKCEAPLDFDLEKVTEQSKDNPIFYVQYAHARCHSVFRQAQE---NLQIE- 475 Query: 480 FPRN---VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 P N + + + SE+ LI LA+YPR+IE A + +EP++LAFYLYDLAS FHGHW Sbjct: 476 NPSNDLMIAHLDQLTNDSEISLIHKLAQYPRIIEQAIVYKEPHRLAFYLYDLASNFHGHW 535 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + G +NP LRF++ NN+KL++ RL LV A ++++SGL I+ V++P EM Sbjct: 536 NKGNDNPELRFIKPNNKKLSLARLGLVQAFINVLSSGLKIVEVKAPTEM 584 >gi|319404147|emb|CBI77740.1| Arginyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498] Length = 588 Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust. Identities = 317/593 (53%), Positives = 428/593 (72%), Gaps = 14/593 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58 M +F +F +++K ++ D K K +ILD +IV + PRD HG LSTNAAM+L++ +G Sbjct: 1 MNVFKNFENKIKKLIELSDIKGK-NGEILDLSKIVADPPRDALHGDLSTNAAMVLAKSVG 59 Query: 59 LDPLTIAELIVARIKID---PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115 L+P +AE I+ + D D+D + IAG GFIN+ S+ + L ++ GI YG+ Sbjct: 60 LNPRALAEKIIKLLNSDQSVSDIDYINIAGPGFINIKFKQSFWQNALKLMIEKGISYGQI 119 Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175 IG+G K+NIE+VSANPTGPMHVGHCR AV+GD LA+L+ F+GYEVT+EYYINDAG QI Sbjct: 120 EIGQGKKINIEYVSANPTGPMHVGHCRGAVIGDVLANLLQFAGYEVTKEYYINDAGEQIK 179 Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235 LA SV RY++AL S++PEG YPG YL +G+ LA K+ +LL +E+ L +++ Sbjct: 180 VLARSVMLRYREALGQTISEIPEGLYPGEYLIPLGQSLAKKFGDKLLIIDQEEALSTIQE 239 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 +++ AMM +IR DL ALNI HD+F SE + + IR I +L GY+Y+GILPPPK Sbjct: 240 HAIDAMMAMIRKDLAALNIYHDVFFSERTLYENNAQAIRSTITDLTLSGYIYKGILPPPK 299 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 K + + R+Q LFRST +GDD DR L+KSD SYTYFAAD+AYF+ K+ R FD MIY+ Sbjct: 300 GKNVEDWE-PREQTLFRSTDIGDDQDRALIKSDNSYTYFAADVAYFRDKFNRHFDEMIYI 358 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 +G+DH+GYVKRLEAVA A+S KA++ VLLC+LV+L+RDG P++MSKRAG F+TLR VV+ Sbjct: 359 LGADHTGYVKRLEAVAKAISGNKAKLTVLLCQLVKLFRDGQPVRMSKRAGSFVTLRDVVE 418 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 EVG D VRFMML+RK LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA+++F Sbjct: 419 EVGRDPVRFMMLYRKCEAPLDFDFAKVTEQSKDNPVFYVQYAHARCHSVFRQAQEVFRTE 478 Query: 476 DFDLFPRN---VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 + P N + + D +E+ LI L EYPR+IE A I +EP++LAFYLYDLAS F Sbjct: 479 N----PSNSTMIAHLDQLVDENEILLIRKLTEYPRIIEQAVIYKEPHRLAFYLYDLASNF 534 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 HGHW+ G +NP LRF++ +N++L++ RL L+ A+ +I++SGL IIGV++ EM Sbjct: 535 HGHWNKGNDNPNLRFIKPDNKELSLARLGLIQAIINILSSGLTIIGVKALTEM 587 >gi|319407165|emb|CBI80804.1| Arginyl-tRNA synthetase [Bartonella sp. 1-1C] Length = 588 Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/593 (53%), Positives = 426/593 (71%), Gaps = 14/593 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58 M +F +F +++K ++ D K K +ILD +IV + PRD HG LSTNAAM+L++ +G Sbjct: 1 MNVFKNFENKIKKLIESSDIKGK-NGEILDLSKIVADPPRDSLHGDLSTNAAMVLAKSVG 59 Query: 59 LDPLTIAELIVARIKID---PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115 L P +AE I+ + D D+D + IAG GFIN+ S+ + L S++ GI YG+ Sbjct: 60 LSPRALAEKIIKLLNSDQSVSDIDHIDIAGPGFINIKFKQSFWQNALKSMIEKGISYGQI 119 Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175 IG+G K+NIE+VSANPTGPMHVGHCR AV+GD LA+L+ F+GYEVT+EYYINDAG QI Sbjct: 120 EIGQGKKINIEYVSANPTGPMHVGHCRGAVIGDVLANLLQFAGYEVTKEYYINDAGEQIK 179 Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235 LA SV RY+QAL S++PEG YPG YL +G+ LA K+ +LL +E+ L I+++ Sbjct: 180 ILARSVMLRYRQALGQIISEIPEGLYPGEYLIPLGQSLAKKFGDKLLIIDQEEALSIIQE 239 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 +++ AMM IR DL ALNI HD+F SE + + IR I +L GY+Y+G LPPPK Sbjct: 240 HAIDAMMATIRKDLAALNIYHDVFFSERTLYENNAQAIRSTITDLTLSGYIYKGTLPPPK 299 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 K + + R+Q LFRST VGDD DR L+KSD SYTYFAAD+AYF+ K+ R FD MIY+ Sbjct: 300 GKNIEDWE-PREQTLFRSTDVGDDQDRALIKSDNSYTYFAADVAYFRDKFNRHFDEMIYI 358 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 +G+DH+GYVKRLEAVA A+S K ++ VLLC+LV+L+RDG P++MSKRAG F+TLR VV+ Sbjct: 359 LGADHTGYVKRLEAVAKAISGNKVKLTVLLCQLVKLFRDGQPVRMSKRAGSFVTLRDVVE 418 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 EVG D VRFMML+RK LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA+++F Sbjct: 419 EVGRDPVRFMMLYRKCEAPLDFDFAKVTEQSKDNPVFYVQYAHARCHSVFRQAQEVFLTE 478 Query: 476 DFDLFPRN---VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 + P N + + D +E+ LI L EYPR+IE A I +EP++LAFYLYDLAS F Sbjct: 479 N----PSNSTMIAHLDQLVDENEILLIRKLTEYPRIIEQAVIYKEPHRLAFYLYDLASNF 534 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 HGHW+ G +NP LRF++ +N++L++ RL L+ A+ +I++SGL IIGV++ EM Sbjct: 535 HGHWNKGNDNPNLRFIKPDNKELSLARLGLIQAIINILSSGLTIIGVKALTEM 587 >gi|319405600|emb|CBI79223.1| Arginyl-tRNA synthetase [Bartonella sp. AR 15-3] Length = 588 Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust. Identities = 314/592 (53%), Positives = 430/592 (72%), Gaps = 12/592 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F +F +++K ++ D K K E+ + L +IV + PRD HG LSTNAAM+L++ +GL Sbjct: 1 MNVFNNFENKIKKLIELSDIKGKNEEILDLSKIVTDPPRDSLHGDLSTNAAMVLAKSVGL 60 Query: 60 DPLTIAELIVARIKID---PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116 +P +A+ I+ I D +++ + +AG GFIN+ + S+ + L S++ GI YG+ Sbjct: 61 NPRALAQKIINLINSDQSFENINHIDVAGPGFINIKFTQSFWQNALKSMIEKGISYGQIQ 120 Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176 IG+G KVNIE+VSANPTGPMHVGHCR AV+GD LA+L+ F+GYEVT+EYYINDAG QI Sbjct: 121 IGQGKKVNIEYVSANPTGPMHVGHCRGAVIGDVLANLLQFTGYEVTKEYYINDAGEQIKV 180 Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236 LA SV RY++AL S++PEG YPG YL +G+ LA K+S +LL +++ L IV ++ Sbjct: 181 LARSVMLRYREALGEKISEIPEGLYPGEYLIPLGQSLAKKFSDKLLIIDQKEALSIVAEH 240 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 ++ AMM +IR DL ALNI HD+F SE + + IR I++L GY+Y+G LPPPK Sbjct: 241 AIDAMMVMIRKDLAALNIYHDVFFSERTLYENNAQAIRSTINDLTLSGYIYKGTLPPPKG 300 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + + + R+Q LFRST +GDD DR L+KSDGSYTYFA D+AYF+ K+ R FD MIY++ Sbjct: 301 QNLEDWE-PREQTLFRSTDIGDDQDRSLIKSDGSYTYFATDVAYFRDKFNRHFDEMIYIL 359 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G+DH+GYVKRLEAVA A+S KA++ VLLC+LV+L+R G P++MSKRAG F+TLR VV+E Sbjct: 360 GADHTGYVKRLEAVAKAISGNKAKLTVLLCQLVKLFRHGRPVRMSKRAGSFVTLRDVVEE 419 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG D +RFMML+RK LDFDF KV E+SK+NP+FYVQYA+ARC SIFRQA+++F + + Sbjct: 420 VGHDPIRFMMLYRKCEVPLDFDFAKVTEKSKDNPIFYVQYAHARCHSIFRQAQEVFLNEN 479 Query: 477 FDLFPRN---VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 P N + D SE+ LI LAEYPR+IE A +EP++LAFYLYDLAS FH Sbjct: 480 ----PSNHTMTAHLDQLIDESEILLIRKLAEYPRIIEQAVTHKEPHRLAFYLYDLASYFH 535 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 GHW+ G +NP LRF+ +N++L++ RL L+ A+ +I++SGL IIGV++P EM Sbjct: 536 GHWNKGNDNPNLRFIIPDNKELSLARLGLIQAILNILSSGLTIIGVKAPTEM 587 >gi|118589112|ref|ZP_01546519.1| arginyl-tRNA synthetase [Stappia aggregata IAM 12614] gi|118438441|gb|EAV45075.1| arginyl-tRNA synthetase [Stappia aggregata IAM 12614] Length = 589 Score = 638 bits (1645), Expect = 0.0, Method: Compositional matrix adjust. Identities = 311/596 (52%), Positives = 420/596 (70%), Gaps = 19/596 (3%) Query: 1 MYLFADFSSRLKNYLKEIDCK-IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF+ R+K+ L+++D K E L R+V+E PRD AHG L+TNAAM+L++PLG+ Sbjct: 1 MNIFADFTQRVKDALQDLDLKDSNGESPDLSRVVVEAPRDPAHGDLATNAAMVLAKPLGM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +AE +VAR+ DP++ IAG GFINL ++ + ++L+S++ GI +G Sbjct: 61 KPRDVAEQLVARLNADPEITETSIAGPGFINLRVAQTVWHRVLASVLAEGIRFGAQERSP 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 KVN+E+VSANPTGPMHVGH R AVVGD LA+++AF+G EV +EYYINDAG+QI+TLA Sbjct: 121 APKVNVEYVSANPTGPMHVGHIRGAVVGDALANILAFAGNEVVKEYYINDAGSQIDTLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY++AL + ++P G YPG YLK VG++L ++ S L + E +WLP+VK+ ++ Sbjct: 181 SAFLRYREALGEDIGEIPAGLYPGDYLKPVGEKLKAEFGSSLADMEEREWLPLVKERAIA 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFH---RGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 AM+++IR DL AL ++H++F SE H G+ S I +++ L +G +YEG LPPPK Sbjct: 241 AMLELIRQDLAALGVEHEVFYSERTLHDRGEGNGSKIDHMLETLRNKGLIYEGTLPPPKG 300 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + + DR+Q LFR++ GDD DR L KSDGSYTYFAAD+AYF+ K+ERGF IYV+ Sbjct: 301 QVPDDWE-DREQTLFRASDFGDDTDRALKKSDGSYTYFAADVAYFQDKFERGFTETIYVL 359 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G+DH GY KRL+AV A+S+ K ++ V C+LV+L RDG P+KMSKR+GDFITLR VVDE Sbjct: 360 GADHGGYAKRLQAVGKAISDGKTEVVVRFCQLVKLMRDGEPVKMSKRSGDFITLRDVVDE 419 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG D VRFMML+RKN LDFDF KV EQSK+NPVFYVQY +ARC S+ RQA D + Sbjct: 420 VGPDPVRFMMLFRKNDAPLDFDFKKVTEQSKDNPVFYVQYGHARCCSVLRQAADELKEAG 479 Query: 477 F---DLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 F DL ++F D E +L +AE+P+V+E A EP+++AFYL++LA Sbjct: 480 FAVEDL-------ARADFSLLDDVGEQELFAKMAEWPKVVEAAAETHEPHRIAFYLHELA 532 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 S HGHW+ G E P LRF+QA N KLT+ RL LV AV+ ++ SGL I+GV +P EM Sbjct: 533 SSLHGHWNKGYELPHLRFIQAGNLKLTLARLALVRAVSLVLASGLTILGVNAPEEM 588 >gi|328543964|ref|YP_004304073.1| Arginyl-tRNA synthetase ArgS [polymorphum gilvum SL003B-26A1] gi|326413708|gb|ADZ70771.1| Arginyl-tRNA synthetase ArgS [Polymorphum gilvum SL003B-26A1] Length = 589 Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust. Identities = 312/589 (52%), Positives = 415/589 (70%), Gaps = 5/589 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F +F++R++ + ++ + L RI +E PRD AHG L+TNAAMIL++PLG+ Sbjct: 1 MNIFVEFTARVQAAVAGLEAVAAAGPDLDLSRITVESPRDPAHGDLATNAAMILAKPLGM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +AE I A + D +V V +AG GFINL ++P+ ++L + V G ++GR+ +G Sbjct: 61 KPRDLAEQIAAALGRDDEVAEVSVAGPGFINLKVAPAVWERVLRAAVTEGSDFGRSRLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 GTKVN+E+VSANPTGPMHVGH R AV GD LA+L+A++GYEVTREYYINDAG+QI TLA Sbjct: 121 GTKVNVEYVSANPTGPMHVGHTRGAVFGDALANLLAYAGYEVTREYYINDAGSQIETLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY++AL + ++P G YPG YLK VG LA + LL+ E WLPIVKD ++ Sbjct: 181 SAFLRYREALGEDIGEIPAGLYPGDYLKPVGAALAAAHGQALLSMNEAGWLPIVKDAAIT 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHR---GDPSPIRDIIDNLARQGYVYEGILPPPKS 296 MM +IR DL+ LN+ HD+F SE H G PS I ++D L +G VYEG LPPPK Sbjct: 241 GMMDLIRADLELLNVHHDVFFSERTLHERSDGTPSQIDLMLDRLRSRGLVYEGTLPPPKG 300 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + + + DR+Q LFR+T GDD+DRPL KSDG+YTYFAAD+AYF KY+RGF+ M+YV+ Sbjct: 301 QLPEDWE-DREQTLFRATDFGDDIDRPLKKSDGTYTYFAADVAYFLSKYQRGFEEMVYVL 359 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G+DH GYVKRLEAV A+S +A + V LC+LV+L+R G P++MSKR+GDFITLR VV+E Sbjct: 360 GADHGGYVKRLEAVGKAISGGEATVIVRLCQLVKLFRAGEPVRMSKRSGDFITLRDVVEE 419 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG D VRFMML+RKN LDFDF KV EQSK+NPVFYVQY +ARC S+ RQA + PDLD Sbjct: 420 VGRDPVRFMMLFRKNDAPLDFDFQKVTEQSKDNPVFYVQYGHARCCSVLRQAGEELPDLD 479 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 + D EL LI LA +P++++ A A EP+++AF+L+DLAS H HW Sbjct: 480 LSDAALSAADLSHLRDVGELDLIAKLALWPKMVDAAAEAHEPHRIAFFLHDLASSLHAHW 539 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + G+E P+LRF+ N T+ RL LV AV+ ++ SGL ++GV++P EM Sbjct: 540 NRGKEMPQLRFINTENTGSTLARLALVRAVSLVLASGLAVLGVDAPPEM 588 >gi|49475743|ref|YP_033784.1| arginyl-tRNA synthetase [Bartonella henselae str. Houston-1] gi|81647809|sp|Q6G316|SYR_BARHE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|49238550|emb|CAF27790.1| Arginyl-tRNA synthetase [Bartonella henselae str. Houston-1] Length = 585 Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust. Identities = 306/589 (51%), Positives = 428/589 (72%), Gaps = 9/589 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F +F ++K L+ D K K + + L +I ++ PRD +HGHLSTNAAM+L++ GL Sbjct: 1 MNVFKNFEKKIKKSLESSDIKGKNGEDLDLSKITVDPPRDSSHGHLSTNAAMVLAKSTGL 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +AE I+ +K DP V+S+ +AG GFIN+ L+ + + ++ S++ GI YGR +G+ Sbjct: 61 NPRALAEKIIELLKNDPSVESINVAGPGFINIKLTKPFWQDLIKSMLEKGISYGRIPMGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G ++N+E+VSANPTGPMHVGHCR AVVGD L++L+ F GY +T+EYYINDAG QI LA Sbjct: 121 GKRINVEYVSANPTGPMHVGHCRGAVVGDVLSNLLQFVGYNITKEYYINDAGKQIEVLAH 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL +++PEG YPG YL +G+ LA ++ +LL +E+ L IVK+ ++ Sbjct: 181 SVLLRYREALGQKINEIPEGLYPGEYLIPLGQSLAQEFGDKLLTIDKEEALSIVKERAIH 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM +IR DL ALNI HDIF SE + + IR+ I++L +GY+Y+G LPPPK + T Sbjct: 241 EMMSMIRKDLAALNIYHDIFFSERMLYADNARAIRNTINDLTLKGYIYKGKLPPPKGQNT 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + +Q LFRST VGDD DR L+KSDGSYTYFAAD+AYF+ K+ R FD MIY++G+D Sbjct: 301 EDWE-PCEQTLFRSTDVGDDQDRVLIKSDGSYTYFAADVAYFRDKFNRHFDEMIYILGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H+GYVKRLEA+A A+S KA+++V LC+LV+L+R+G P++MSKRAG F+TLR VV+EVGS Sbjct: 360 HAGYVKRLEAMAKAISNDKAKLSVFLCQLVKLFRNGHPVRMSKRAGSFVTLRDVVEEVGS 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF--PDLDF 477 D VRFMML+RK LDFDF KV EQSK+NP+FYVQYA ARC S+FRQA++ ++ Sbjct: 420 DPVRFMMLYRKCEAPLDFDFAKVTEQSKDNPIFYVQYASARCHSVFRQAQETLCIENISN 479 Query: 478 DLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 D +I + D +E+ LI L+EYPR+IE A + +EP++LAFYLYDLAS FH HW Sbjct: 480 D----KIIEHLNRLTDDNEIFLIRKLSEYPRIIEQAVVHKEPHRLAFYLYDLASSFHTHW 535 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + G +N LRF+Q ++R L+ RL L+ A+ +I++SGL I+G+++ EM Sbjct: 536 NKGSDNLNLRFIQPDDRNLSFARLGLIQAIMNILSSGLAIVGIKAATEM 584 >gi|304391801|ref|ZP_07373743.1| arginyl-tRNA synthetase [Ahrensia sp. R2A130] gi|303296030|gb|EFL90388.1| arginyl-tRNA synthetase [Ahrensia sp. R2A130] Length = 587 Score = 630 bits (1625), Expect = e-178, Method: Compositional matrix adjust. Identities = 304/585 (51%), Positives = 401/585 (68%), Gaps = 4/585 (0%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 +F DF R+ N L+ + ++ + R+ +E PRD +HG L+TNAAMIL++P+ +P Sbjct: 4 VFQDFEQRITNVLQALPDVVESGADV-SRLTVEPPRDLSHGDLATNAAMILAKPMKTNPR 62 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +A I A ++ D DV SV IAG GFINL L + + L+ ++ G YG + G G K Sbjct: 63 ALAATIAAELEKDADVASVEIAGPGFINLRLVDGFWSRELTRVLTEGRRYGADATGNGKK 122 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VN+E+VSANPTGPMHVGHCR AVVGD +A+L+ F+GY+V REYY NDAG QI+ LA S F Sbjct: 123 VNVEYVSANPTGPMHVGHCRGAVVGDAMANLLEFAGYDVVREYYTNDAGGQIDVLARSAF 182 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 RY++AL + +PEG YPG YLK +G+ L D + LL E L IV+ ++ AMM Sbjct: 183 LRYREALGQDIGKIPEGLYPGEYLKPLGQSLVDAHGDALLTMDESDMLAIVRPAAIDAMM 242 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDP--SPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 +IR DL AL + HD+F SE H G S I ++ L G VY G LPPPK + Sbjct: 243 DLIRADLAALGVHHDVFFSERSLHAGGEQGSAISKAVNRLTDMGLVYTGTLPPPKGTAPE 302 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + DR+QLLFRST VGDD+DR L KS G YTYFAAD+ YF+ K++RGF+ M++V+G+DH Sbjct: 303 DWE-DREQLLFRSTDVGDDMDRALQKSSGDYTYFAADVGYFQDKFDRGFEEMVFVLGADH 361 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GYVKR+EA+ A+SE A++ + LC+LV+L+RDG P+ MSKR+G+FITLR VVDEVG D Sbjct: 362 GGYVKRMEALGKAISEDTAKVTIRLCQLVKLFRDGEPVTMSKRSGNFITLREVVDEVGRD 421 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +VRFMML+RKN LDFDF KVKEQS++NP+FYVQYA+ARC S+ RQA P+LD Sbjct: 422 AVRFMMLYRKNDAPLDFDFAKVKEQSRDNPIFYVQYAHARCHSVLRQAARDMPNLDISAD 481 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 E D E L+ LAEYPRVI+ A +QEP++L+FYLYDLA++ HG W+ GR Sbjct: 482 ALRAAKTELLLDDGEDGLMRKLAEYPRVIDAAARSQEPHRLSFYLYDLAALLHGQWNKGR 541 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ LRF+ N +LT+ RL LV AV+ II SGL IIG ++P EM Sbjct: 542 DDVTLRFIHQENPELTLARLGLVTAVSEIIASGLAIIGADAPQEM 586 >gi|298291873|ref|YP_003693812.1| arginyl-tRNA synthetase [Starkeya novella DSM 506] gi|296928384|gb|ADH89193.1| arginyl-tRNA synthetase [Starkeya novella DSM 506] Length = 588 Score = 630 bits (1624), Expect = e-178, Method: Compositional matrix adjust. Identities = 315/589 (53%), Positives = 411/589 (69%), Gaps = 6/589 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFA F+ +++ + ++ + V I R+V+E PRD +HG L+TNAAM+L++ G+ Sbjct: 1 MNLFAIFADHVRDAVAQLATEGAVPAGIDTTRVVVEPPRDASHGDLATNAAMVLAKDAGM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +A+ + A++ P V V +AG GFIN+ L SY +IL++++ +G +YGR G Sbjct: 61 KPRELADKLTAKLAALPGVAKVDVAGPGFINIALDGSYWPRILAAVLNAGRDYGRTDAGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G K+N+E+VSANPTGPMHVGHCR AV GD LA+L+AF+G++VTREYYINDAGAQ++ LA Sbjct: 121 GQKINVEYVSANPTGPMHVGHCRGAVFGDALANLLAFAGWKVTREYYINDAGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY++AL S +PEG YPG YL VGK L KY +L+ E +WLP V+ ++ Sbjct: 181 SAFLRYREALGETIS-IPEGLYPGDYLVPVGKALVAKYGRTMLDRSEAEWLPAVRKAAID 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHR---GDPSPIRDIIDNLARQGYVYEGILPPPKS 296 AMM +IRDDL ALNI HD+F SE H G PS I ++D L + VYEG LPPPK Sbjct: 240 AMMAMIRDDLAALNIHHDVFFSERTLHARPDGQPSIIDRLLDELRARNLVYEGRLPPPKG 299 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + + + DR+Q LFR+T GDDVDRPL+KSDG+YTYFAAD+AY K KY+RGF MI V Sbjct: 300 QPIEDWE-DREQTLFRATDFGDDVDRPLMKSDGAYTYFAADIAYHKDKYDRGFKRMIDVW 358 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G+DH GYVKR++A A S +A ++V LC+LVRL R G P+KMSKRAGDF+TLR VVDE Sbjct: 359 GADHGGYVKRMQAAVKAASGGEASLDVELCQLVRLLRAGEPVKMSKRAGDFVTLREVVDE 418 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG D+VRFMM+ RKN +LDFD KV EQS++NPVFYVQYA+AR SI R AK+ F DL Sbjct: 419 VGRDAVRFMMINRKNDAVLDFDLAKVIEQSRDNPVFYVQYAHARASSILRNAKEAFTDLP 478 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 + D E+ LI +A YPR++E A A+EP++LAFYLYDLAS H W Sbjct: 479 AEAAAFASAELTLLEDEGEIALIKLIASYPRIVEQAAAAREPHRLAFYLYDLASALHAQW 538 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + G++ P LRF+ ++RK T RL LVHAVA II SGL+I+GV +P EM Sbjct: 539 NRGKDLPHLRFIIEDDRKSTYARLALVHAVALIIASGLSILGVGAPEEM 587 >gi|240850752|ref|YP_002972152.1| arginyl-tRNA synthetase [Bartonella grahamii as4aup] gi|240267875|gb|ACS51463.1| arginyl-tRNA synthetase [Bartonella grahamii as4aup] Length = 585 Score = 629 bits (1622), Expect = e-178, Method: Compositional matrix adjust. Identities = 305/587 (51%), Positives = 427/587 (72%), Gaps = 5/587 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F +F ++K ++ D K K + + L +I ++ PRD +HGHLSTNAAM+L++ +G+ Sbjct: 1 MNIFKNFEKKIKRSIELSDIKGKNGEDLDLSKITVDPPRDSSHGHLSTNAAMVLAKSIGI 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A+ I+ +K D ++++ +AG GFIN+ L+ + + + S++ SG YGR +G+ Sbjct: 61 NPRALADKIIELLKNDSSIENIDVAGPGFINIKLTKLFWQDAIKSMLESGTSYGRIPMGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGPMHVGHCR AVVGD L++L+ F+GY +T+EYYINDAG QI LA Sbjct: 121 GKRVNVEYVSANPTGPMHVGHCRGAVVGDVLSNLLQFTGYNITKEYYINDAGQQIEVLAH 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL +++PEG YPG YL +G+ LA ++ +LL +++ L +VK+ ++ Sbjct: 181 SVLLRYREALGQEINEIPEGLYPGEYLIPLGQSLAQEFGDQLLTMDKDEALSLVKERAIH 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL ALNI HDIF SE + + IR+ I++L GY+Y+G LPPPK + T Sbjct: 241 AMMTMIREDLAALNIYHDIFFSERMLYADNARAIRNTINDLTLNGYIYKGKLPPPKGQNT 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + +Q LFRST VGDD DR L+KSDGSYTYFAAD+AYF+ K+ R FD MIY++G+D Sbjct: 301 EDWE-PSEQTLFRSTNVGDDQDRVLVKSDGSYTYFAADVAYFRDKFNRHFDEMIYILGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H+GYVKRLEA+A A+S KA+++V LC+LV+L+R+G P++MSKRAG F+TLR VV+EVG Sbjct: 360 HAGYVKRLEAMAKAISGDKAKLSVFLCQLVKLFRNGHPVRMSKRAGSFVTLRDVVEEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RK LDFDF KV EQSK+NP+FYVQYA ARC S+FRQA++ +F Sbjct: 420 DPVRFMMLYRKCEAPLDFDFAKVTEQSKDNPIFYVQYASARCHSVFRQAQEALHIKNFS- 478 Query: 480 FPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 +I D E+ LI L+EYPR+IE A I +EP++LAFYLYDLAS FH HW+ Sbjct: 479 -NDTLIAHLHRLTDDHEILLIRKLSEYPRIIEQAVIHKEPHRLAFYLYDLASSFHTHWNK 537 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G EN LRF+Q ++++L+ RL L+ AV +I++SGL IIGVE+P EM Sbjct: 538 GSENLNLRFIQPDDKELSFARLGLIQAVINILSSGLTIIGVEAPIEM 584 >gi|49474356|ref|YP_032398.1| arginyl-tRNA synthetase [Bartonella quintana str. Toulouse] gi|81646981|sp|Q6FZH0|SYR_BARQU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|49239860|emb|CAF26254.1| Arginyl-tRNA synthetase [Bartonella quintana str. Toulouse] Length = 585 Score = 626 bits (1614), Expect = e-177, Method: Compositional matrix adjust. Identities = 304/588 (51%), Positives = 425/588 (72%), Gaps = 7/588 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F +F ++K L+ D K K + + L +I ++ PRD +HGHLSTNAAM+L++ +GL Sbjct: 1 MNVFKNFEKKIKKSLELSDIKGKNGEDLNLSKITVDPPRDSSHGHLSTNAAMVLAKSIGL 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +AE I+ +K D +D + IA GFIN+ L+ S+ + + S++ G YGR +G+ Sbjct: 61 NPHALAEKIIELLKNDSSIDCIDIAAPGFINIKLTKSFWQDAIKSMLKKGTSYGRIPMGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G ++N+E+VSANPTGPMHVGHCR AV GD L++L+ F GY +T+EYYINDAG QI LA Sbjct: 121 GKRINVEYVSANPTGPMHVGHCRGAVFGDVLSNLLQFVGYNITKEYYINDAGKQIEVLAH 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL +++PEG YPG YL +G+ LA ++S +LL +++ L IVK+ ++ Sbjct: 181 SVLLRYREALGQKINEIPEGLYPGEYLIPLGQSLAQEFSDQLLTIDKDEALSIVKERAIY 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL ALNI HDIF SE + + IR+ I++L GY+Y+G LPPPK + T Sbjct: 241 AMMSMIRKDLAALNIYHDIFFSERMLYADNARAIRNTINDLTLNGYIYKGELPPPKGQNT 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LFRST VGDD DR L+KSDGSYTYFAAD+AYF+ K+ R FD MIY++G+D Sbjct: 301 EDWE-PREQTLFRSTDVGDDQDRVLVKSDGSYTYFAADVAYFRDKFNRHFDEMIYILGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H+GYVKRLEA+A A+S A+++V LC+LV+L+R+G P++MSKRAG F+TLR VV+EVG Sbjct: 360 HAGYVKRLEAMAKAISGNSAKLSVFLCQLVKLFRNGHPVRMSKRAGSFVTLRDVVEEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF--PDLDF 477 D VRFMML+RK LDFDF KV EQSK+NP+FYVQYA ARC S+FRQA++IF ++ Sbjct: 420 DPVRFMMLYRKCEAPLDFDFAKVTEQSKDNPIFYVQYASARCHSVFRQAQEIFRIENVSN 479 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 D + D +E+ LI L+EYPR+IE A + +EP++LAFYLYDLAS FH HW+ Sbjct: 480 DTM---IAHLNRLTDDNEIFLIRKLSEYPRIIEQAVVHKEPHRLAFYLYDLASSFHAHWN 536 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G +N LRF+Q ++++L+ RL L+ A+ +I++SGL I+G+E+ EM Sbjct: 537 KGSDNFDLRFIQPDDKELSFARLGLIQAIMNILSSGLAIVGIEAATEM 584 >gi|90419380|ref|ZP_01227290.1| arginyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1] gi|90336317|gb|EAS50058.1| arginyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1] Length = 583 Score = 625 bits (1612), Expect = e-177, Method: Compositional matrix adjust. Identities = 315/586 (53%), Positives = 411/586 (70%), Gaps = 5/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +FADF SR+K ++ + + L R+ +E PRD AHG L+TNAAM+L++PLGL Sbjct: 1 MNIFADFESRVKAAVEAVLSDSENGVPDLARVTVEPPRDAAHGDLATNAAMVLAKPLGLK 60 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A I A + DPDV++ IAG GFINL L + L+ I+ +G ++GR G Sbjct: 61 PRDLATRIAAHLARDPDVETAEIAGPGFINLKLRQPFWIAHLAGILAAGGDFGRA-PATG 119 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +VN+E+VSANPTGPMHVGHCR AVVGD +ASLMAF G EVT EYYINDAG Q+N LA S Sbjct: 120 RRVNVEYVSANPTGPMHVGHCRGAVVGDAVASLMAFGGDEVTTEYYINDAGEQVNVLARS 179 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 RY++AL ++P G YPG YLK VG++LA ++ LL E +WLP+V++ ++ A Sbjct: 180 ALLRYREALGETIDEIPAGLYPGEYLKPVGEKLASEFGDRLLAMDEAEWLPLVRERAIDA 239 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM +IR DLK L I+ D+F SE H + I I +L +G+VY+G LPPPK + + Sbjct: 240 MMAMIRADLKLLGIEQDVFFSERTLHDDNGGKIAAAIADLRERGFVYQGSLPPPKGQLPE 299 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + DR+Q L RST VGDD DRPL+KSDG YTYFAAD+AYF K+ERGF M+YV+G+DH Sbjct: 300 DWE-DREQTLLRSTEVGDDQDRPLVKSDGRYTYFAADVAYFHDKFERGFQEMVYVLGADH 358 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GYVKRLEAVA AVS A +VLLC+LV+LYR+G P+ MSKR+G+F+TL VV+EVG D Sbjct: 359 GGYVKRLEAVARAVSGGTATADVLLCQLVKLYRNGEPVTMSKRSGNFVTLADVVEEVGRD 418 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFDL 479 VRFMML+RK+ LDFDF KV EQSK+NPVFYVQYA+AR +IFRQA + L DF Sbjct: 419 PVRFMMLFRKSDAPLDFDFQKVTEQSKDNPVFYVQYAHARSAAIFRQAVEAGLTLPDFAS 478 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 R + + D E+ LI LAE+PR+I++A A+EP++LAFYLYDLAS FH ++ G Sbjct: 479 LDRETLNLLN--DEGEIGLIRKLAEFPRLIKSAADAKEPHRLAFYLYDLASSFHAQYNRG 536 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ P LRFV A+ K+T RL LV AVA ++ +GL +IGV++P EM Sbjct: 537 KDLPELRFVNADEAKITFARLALVKAVALVLATGLGLIGVDAPEEM 582 >gi|163868520|ref|YP_001609729.1| arginyl-tRNA synthetase [Bartonella tribocorum CIP 105476] gi|189083523|sp|A9IVK4|SYR_BART1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|161018176|emb|CAK01734.1| Arginyl-tRNA synthetase [Bartonella tribocorum CIP 105476] Length = 585 Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust. Identities = 301/588 (51%), Positives = 427/588 (72%), Gaps = 7/588 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F +F ++K ++ D K K + + L +I ++ PRD +HGHLSTNAAM+L++ +GL Sbjct: 1 MNIFKNFEKKIKKSIELSDIKGKNGEDLDLSKITVDPPRDSSHGHLSTNAAMVLAKSIGL 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +A+ I+ +K D ++++ +AG GFIN+ L+ + + + ++ G+ YGR +G+ Sbjct: 61 SPRALADKIIELLKNDISIENIDVAGPGFINIKLTKLFWQDAVKYMLELGLSYGRIPMGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G ++N+E+VSANPTGPMHVGHCR AVVGD L++L+ F+GY +T+EYYINDAG QI LA Sbjct: 121 GKRINVEYVSANPTGPMHVGHCRGAVVGDVLSNLLQFAGYNITKEYYINDAGQQIEVLAH 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL +++PEG YPG YL +G+ LA ++ +LL ++ L IVK+ ++ Sbjct: 181 SVLLRYREALGQKINEIPEGLYPGEYLIPLGQALAQEFGDQLLTMDRDEALSIVKERAIH 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM +IR+DL ALNI HDIF SE + + IR+ I++L GY+Y+G LPPPK + Sbjct: 241 TMMSMIREDLAALNIYHDIFFSERMLYADNARAIRNTINDLTLNGYIYKGKLPPPKGQNI 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + +Q LFRST VGDD DR L+KSDGSYTYFAAD+AYF+ K+ R FD MIY++G+D Sbjct: 301 EDWE-PSEQTLFRSTNVGDDQDRVLIKSDGSYTYFAADVAYFRDKFNRHFDEMIYILGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H+GYVKRLEA+A A+S KA+++V LC+LV+L+R+G P++MSKRAG F+TLR VV+EVG Sbjct: 360 HAGYVKRLEAMAKAISGNKAKLSVFLCQLVKLFRNGQPVRMSKRAGSFVTLRDVVEEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RK LDFDF KV EQSK+NP+FYVQYA ARC S+FRQA+++ L + Sbjct: 420 DPVRFMMLYRKCEAPLDFDFAKVTEQSKDNPIFYVQYANARCHSVFRQAQEV---LHIES 476 Query: 480 FPRNVIPQ--ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 F +++ D +E+ LI L+EYPR+IE A + +EP++LAFYLYDLAS FH HW+ Sbjct: 477 FSNDILITYLHRLIDDNEILLIRKLSEYPRIIEQAVVHKEPHRLAFYLYDLASCFHTHWN 536 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G EN LRF+Q ++++L+ RL L+ AV +I++SGL+IIGVE+P EM Sbjct: 537 KGSENLNLRFIQPHDKELSFARLGLIQAVINILSSGLSIIGVEAPIEM 584 >gi|92117303|ref|YP_577032.1| arginyl-tRNA synthetase [Nitrobacter hamburgensis X14] gi|123265276|sp|Q1QMH5|SYR_NITHX RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|91800197|gb|ABE62572.1| arginyl-tRNA synthetase [Nitrobacter hamburgensis X14] Length = 597 Score = 619 bits (1597), Expect = e-175, Method: Compositional matrix adjust. Identities = 307/594 (51%), Positives = 405/594 (68%), Gaps = 16/594 (2%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKIL------DRIVIERPRDCAHGHLSTNAAMILSR 55 +LFAD +R+ C VE+ L RIV+E PR+ +HG ++TNAAM+L++ Sbjct: 9 HLFADVLARVHAV-----CSALVEEGALPAGLDLSRIVVEPPREASHGDMATNAAMVLAK 63 Query: 56 PLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115 P +AE + A+++ D +D IAG GFINL L P L +++ G YGR+ Sbjct: 64 GAKSKPRDLAEKVAAKLRADGLIDKAEIAGPGFINLTLKPQVWSDALRTVLREGDGYGRS 123 Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175 IG G KVN+E+VSANPTGPMHVGHCR AV GD LASL++F+GY VTREYYINDAGAQ++ Sbjct: 124 AIGAGEKVNVEYVSANPTGPMHVGHCRGAVFGDALASLLSFAGYGVTREYYINDAGAQVD 183 Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235 LA S + RY++AL + ++PEG YPG YLK VG+ LA ++ LL PE +WLP+ + Sbjct: 184 VLARSAYLRYREALGQDIGEIPEGLYPGDYLKPVGQALAAEHGDSLLKAPEAEWLPVARA 243 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 ++ MM++I+ DL ALNIQH++F SE G + ID L +G VYEG LPPPK Sbjct: 244 KAIAMMMEMIKGDLAALNIQHEVFFSERSLIEGGSDRVAATIDFLRAKGDVYEGRLPPPK 303 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 + + DR+Q LFR+T GDD+DRPL KSDG YTYFA+D+AY K K++RGF NM+ V Sbjct: 304 GAPVEDYE-DREQTLFRATAYGDDIDRPLKKSDGGYTYFASDIAYHKTKFDRGFLNMVDV 362 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 G+DH GY+KR++A AV+ KA ++V + +LV+L R+G P+KMSKR+GDF+TLR VVD Sbjct: 363 WGADHGGYIKRVQAAIKAVTSGKATLDVKIVQLVKLLRNGEPVKMSKRSGDFVTLREVVD 422 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 EVGSD+VRFMML+RKN +LDFD KV EQSK+NPVFYVQY +AR SIFR A++ FPDL Sbjct: 423 EVGSDAVRFMMLFRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGFSIFRNAREAFPDL 482 Query: 476 DFDLFPRNVIPQ----ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 D R E D +EL L+ LA YPR +E A +A EP+++AFYLYDLAS Sbjct: 483 PEDASKRAAFLAAAAVERLTDPAELGLLRRLALYPRTVEAAALAHEPHRIAFYLYDLASE 542 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 FH W+ GR+ P LRF+ N+ +T RL LV V S++ SGL ++GV +PNEM Sbjct: 543 FHALWTKGRDMPHLRFIINNDAVITRARLALVQGVVSVLASGLAVLGVHAPNEM 596 >gi|158424430|ref|YP_001525722.1| arginyl-tRNA synthetase [Azorhizobium caulinodans ORS 571] gi|172047969|sp|A8I9L7|SYR_AZOC5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|158331319|dbj|BAF88804.1| arginyl-tRNA synthetase [Azorhizobium caulinodans ORS 571] Length = 586 Score = 619 bits (1597), Expect = e-175, Method: Compositional matrix adjust. Identities = 304/586 (51%), Positives = 411/586 (70%), Gaps = 2/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M ++A F+ ++ + + ++ + L RIV+E PRD AHG L+TNAAM+L++ L + Sbjct: 1 MNVYAIFADHVREAVAALAGELPEAGALDLSRIVVEPPRDAAHGDLATNAAMVLAKDLKM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +AE I AR+ P+V V +AG GFINL L Y +L++++ +G ++GR+ +G Sbjct: 61 KPRDLAEKIAARLAQVPNVAKVDVAGPGFINLTLDAGYWPGVLAALLRAGTDFGRSDLGG 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G VN+E+VSANPTGPMHVGHCR AV GD LASL+AF+G++VTREYYINDAGAQ++ LA Sbjct: 121 GEAVNVEYVSANPTGPMHVGHCRGAVFGDALASLLAFAGFKVTREYYINDAGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++A ++P+G YPG YL VGK LA+ + SE L PE +WLPI + +++ Sbjct: 181 SAYLRYREAATGETVEIPDGLYPGDYLVPVGKTLAEVHGSEYLESPESEWLPIFRTFAIG 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM++IRDDL+AL I D+F SE + I+ L R G VYEG LPPPK Sbjct: 241 AMMEMIRDDLQALGISFDVFFSERSLTAAGIDRVGLTIEQLRRTGEVYEGRLPPPKGAPI 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST GDDVDRPL+KSDGSYTYFA D+AY K K++RGF MI V G+D Sbjct: 301 EDWE-DREQSLFRSTAHGDDVDRPLVKSDGSYTYFAGDIAYHKDKFDRGFRRMIDVWGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A AV+ +A ++V LC+LVRL R+G ++MSKRAG F+TLR VVDEVG Sbjct: 360 HGGYVKRMQAAVKAVTAGQATLDVELCQLVRLLRNGEQVRMSKRAGSFVTLREVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+VRFMML+RKN LDFD KV EQS+ENPVFYVQYA+AR +SI R AK+ DL Sbjct: 420 DAVRFMMLFRKNDATLDFDLAKVIEQSRENPVFYVQYAHARAQSILRNAKEQHADLPESG 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 P + D EL L+ LA +PR++E A A+EP+++AFYL+++AS FHG W+ G Sbjct: 480 AIYAHAPLDRLTDEGELGLVKRLAGWPRLVEQAAHAREPHRVAFYLHEVASEFHGQWNRG 539 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ P LRF+ N+R+LTM RL LVH VA+++ SGL ++GVE+ +EM Sbjct: 540 KDLPHLRFIIENDRELTMARLALVHGVAAVLASGLGLLGVEAVDEM 585 >gi|254469368|ref|ZP_05082773.1| arginyl-tRNA synthetase [Pseudovibrio sp. JE062] gi|211961203|gb|EEA96398.1| arginyl-tRNA synthetase [Pseudovibrio sp. JE062] Length = 584 Score = 619 bits (1597), Expect = e-175, Method: Compositional matrix adjust. Identities = 303/590 (51%), Positives = 411/590 (69%), Gaps = 12/590 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +FADF+ R+ + +K +D + L R+ +E PRD AHG L+TNAAM+L++ L + Sbjct: 1 MNIFADFAERVNSVVKGLDLAADAPELDLRRVTVEPPRDAAHGDLATNAAMVLAKQLKMK 60 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE I ++ D +V++V +AG GFIN+ +S + +++ +V G ++G + G G Sbjct: 61 PRDLAEKIAEGLRADSEVEAVDVAGPGFINIRVSKTLWERVIGDVVAKGDKFGASARGDG 120 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KVN+E+VSANPTGPMHVGH R AVVGD LASL+ F+GY+VTREY INDAG+QI+TLA S Sbjct: 121 LKVNVEYVSANPTGPMHVGHTRGAVVGDALASLLQFAGYDVTREYVINDAGSQIDTLANS 180 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 F RY++AL + +PEGYYPG YL VGK LA++Y L + + L ++K Y+V Sbjct: 181 AFLRYREALGEDIGQIPEGYYPGEYLIPVGKSLAEEYGESLKDMAPAERLALLKGYTVDK 240 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM +IR DL ALN++HD+F SE H G + I +D L ++ VY G LPPPK + + Sbjct: 241 MMDMIRGDLGALNVKHDVFFSEKTMH-GQGNAIDLTLDALRKRDLVYNGTLPPPKGEVPE 299 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + DR+Q LFRS+ GDD DR L+KSDGSYTYFAAD+AY + K ERGF +I+V+G+DH Sbjct: 300 DWE-DREQTLFRSSNYGDDSDRALVKSDGSYTYFAADVAYMRDKIERGFKEIIFVLGADH 358 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 +GYVKRLEA+ A+S + V LC+LV+L++ G KMSKR+G+FITLR VVDEVG D Sbjct: 359 AGYVKRLEAIGNAISGGDVDVIVRLCQLVKLFKGGAEFKMSKRSGNFITLRDVVDEVGVD 418 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +VRFMML+RKN LDFDF KVKEQSK+NPVFYVQY +ARC S+ RQA + + D F Sbjct: 419 AVRFMMLYRKNDAQLDFDFDKVKEQSKDNPVFYVQYGHARCHSVLRQAAE-----ELDWF 473 Query: 481 PRNVIP-QESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 Q ++F D EL LI +A++PR+++ A EP+++AFYLY+LAS HGH Sbjct: 474 SNTAEELQSADFAQLEDEGELALIAKMAQWPRIVDGAAENHEPHRIAFYLYELASALHGH 533 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 WS G+E P+LRF+ +LT RL LV+AV+ +I SGLN++GV +PNEM Sbjct: 534 WSRGKEKPQLRFINDKTPELTKARLALVYAVSQVIASGLNVLGVTAPNEM 583 >gi|209885394|ref|YP_002289251.1| arginyl-tRNA synthetase [Oligotropha carboxidovorans OM5] gi|209873590|gb|ACI93386.1| arginyl-tRNA synthetase [Oligotropha carboxidovorans OM5] Length = 597 Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust. Identities = 305/589 (51%), Positives = 407/589 (69%), Gaps = 6/589 (1%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 ++FAD R++ + + + + I L RIV+E P+D +HG ++TNAAM+L++ Sbjct: 9 HIFADILGRVQGVCRALIADGTLPEGIDLSRIVVEPPKDASHGDMATNAAMVLAKEAKTK 68 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A+ I A++ DP V SV +AG GFINL L L +++ +G YGR+ IG G Sbjct: 69 PRDLADKIAAKLGADPQVASVSVAGPGFINLTLKNEAWFDALRAVLNTGAAYGRSEIGAG 128 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KVN+E+VSANPTGPMHVGHCR AV GD LA+L+AF+GY+VT+EYYINDAGAQ++ LA S Sbjct: 129 EKVNVEYVSANPTGPMHVGHCRGAVFGDALATLLAFAGYDVTKEYYINDAGAQVDVLARS 188 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 F RY++AL ++P+G YPG YLK VG+ LA +Y +L+ PE +WLP+V++ ++ Sbjct: 189 AFLRYREALGEAIGEIPDGLYPGDYLKPVGEALAKEYGDKLVKQPEAEWLPLVREKAIAM 248 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM++IR DL ALNI+HD+F SE G + I L +G VYEG LPPPK + Sbjct: 249 MMEMIRGDLAALNIKHDVFFSERSLIVGGTDQVGATIAGLRAKGDVYEGRLPPPKGAPVE 308 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + DR+Q LFR+T GDDVDRPL KSDGSYTYFA+D+AY K K++RGF NM+ V G+DH Sbjct: 309 DYE-DREQTLFRATAFGDDVDRPLKKSDGSYTYFASDIAYHKNKFDRGFRNMVDVWGADH 367 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY+KR++A AV+ + ++V + +LVRL R G P+KMSKRAGDF+TLR VVDEVGSD Sbjct: 368 GGYIKRVQAAIKAVTAGEGTLDVKIVQLVRLLRAGEPVKMSKRAGDFVTLREVVDEVGSD 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +VRFMML+RKN +LDFD KV EQSK+NPVFYVQY +AR S+F+ A+ PDL D Sbjct: 428 AVRFMMLFRKNDAVLDFDLAKVLEQSKDNPVFYVQYGHARGHSVFKNARVTVPDLPEDNG 487 Query: 481 PRNVI----PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 R P E D EL LI LA +PR +E A A EP+++AFYLYDLAS FH W Sbjct: 488 KRLAFLAGAPVERLTDPVELSLIRQLALFPRTLEAAAAAHEPHRIAFYLYDLASEFHALW 547 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + GR+ P LRF+ N+ ++T+ RL LV V S++ SGL ++GV +PNEM Sbjct: 548 TKGRDAPHLRFIIENDAEMTVARLALVQGVVSVLASGLAVLGVHAPNEM 596 >gi|299134946|ref|ZP_07028137.1| arginyl-tRNA synthetase [Afipia sp. 1NLS2] gi|298589923|gb|EFI50127.1| arginyl-tRNA synthetase [Afipia sp. 1NLS2] Length = 597 Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust. Identities = 302/589 (51%), Positives = 407/589 (69%), Gaps = 6/589 (1%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 +LFAD R+ +++ + + + I L RIV+E P+D HG ++TNAAM+L++ + Sbjct: 9 HLFADILGRVHGVCRDLMTEGVLPEGIDLSRIVVEPPKDATHGDMATNAAMVLAKEAKVK 68 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A+ I +++ DP V +V +AG GFINL L + L +++ +G YGR+ +G G Sbjct: 69 PRDLADRISDKLRTDPLVLAVSVAGPGFINLTLKNEAWFEALRTVLRTGEGYGRSHVGAG 128 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KVN+E+VSANPTGPMHVGHCR AV GD LA+L+A +GY VT+EYYINDAGAQ++ LA S Sbjct: 129 EKVNVEYVSANPTGPMHVGHCRGAVFGDALATLLASAGYAVTKEYYINDAGAQVDVLARS 188 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 RY++AL ++PEG YPG YLK VG+ LA +Y +L+ PE +WLP+V+D S+ Sbjct: 189 AHLRYREALGETIGEIPEGLYPGDYLKPVGEALAREYGDKLVKQPEAEWLPLVRDKSIGM 248 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM++IR DL ALNI+HD+F SE G + I L +G VYEG LPPPK + Sbjct: 249 MMEMIRGDLAALNIKHDVFFSERSLIAGGTDQVGATIAGLRAKGDVYEGHLPPPKGAPVE 308 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + DR+Q LFR+T GDDVDRPL KSD SYTYFA+D+AY K K++RGF NM+ V G+DH Sbjct: 309 DYE-DREQTLFRATAFGDDVDRPLKKSDNSYTYFASDIAYHKNKFDRGFRNMVDVWGADH 367 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY+KR++A AV+ + +++V + +LVRL R+G P+KMSKRAGDF+TLR VVDEVGSD Sbjct: 368 GGYIKRVQAAIKAVTAGEGELDVKIVQLVRLLRNGEPVKMSKRAGDFVTLREVVDEVGSD 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +VRFMML+RKN +LDFD KV EQSK+NPVFYVQY +AR S+F+ A+ PDL D Sbjct: 428 AVRFMMLFRKNDAVLDFDLAKVLEQSKDNPVFYVQYGHARGHSVFKNARATVPDLPEDDG 487 Query: 481 PRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 R +E D EL LI LA +PR +E+A +A EP+++AFYLYDLAS FH W Sbjct: 488 KRRAYLGSAEVERLNDPVELSLIRQLALFPRTLESAALAHEPHRIAFYLYDLASEFHALW 547 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + GR+ P LRF+ N+ +T RL LV V S++ SGL ++GV +PNEM Sbjct: 548 TKGRDAPHLRFIMENDAGITTARLALVQGVVSVLASGLAVLGVHAPNEM 596 >gi|254501189|ref|ZP_05113340.1| arginyl-tRNA synthetase [Labrenzia alexandrii DFL-11] gi|222437260|gb|EEE43939.1| arginyl-tRNA synthetase [Labrenzia alexandrii DFL-11] Length = 579 Score = 612 bits (1577), Expect = e-173, Method: Compositional matrix adjust. Identities = 298/564 (52%), Positives = 400/564 (70%), Gaps = 12/564 (2%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 L R+V+E PRD AHG +TNAAM+L++PLG+ P +AE +V + DP++ +AG GF Sbjct: 20 LSRVVVEAPRDPAHGDFATNAAMVLAKPLGMKPRDLAERLVVELSKDPEITETTVAGPGF 79 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 INL ++ S +KIL I+ G+ YG +KVN+E+VSANPTGPMHVGH R AVVGD Sbjct: 80 INLRVAQSVWQKILGRILAEGLGYGGTKTADPSKVNVEYVSANPTGPMHVGHIRGAVVGD 139 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 LA+L+ F+G EV +EYYINDAG+QI+TLA S F RY++AL + ++P G YPG YL Sbjct: 140 ALANLLEFAGNEVVKEYYINDAGSQIDTLARSAFLRYREALGEDIGEIPAGLYPGDYLVP 199 Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH-R 267 VG L D++ S+L + E WLP VK+ ++ AM+++IR DL AL ++H++F SE H R Sbjct: 200 VGVALKDEFGSDLRDQDEADWLPKVKERAISAMLELIRSDLAALGVEHEVFFSERSLHER 259 Query: 268 GDP--SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 D S I ++D L +G VYEG LPPPK + + + DR+Q LFR++ GDD DR L Sbjct: 260 SDSNGSKIDHMLDGLRAKGLVYEGTLPPPKGQVPEDWE-DREQTLFRASDYGDDTDRALK 318 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 KSDGSYTYFAAD+AYF+ K++RGF IYV+G+DH GY KRL+AV AVS ++ V Sbjct: 319 KSDGSYTYFAADVAYFEDKFKRGFKEAIYVLGADHGGYAKRLQAVGKAVSGGDTEVIVRF 378 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 C+LV+L RDG P+KMSKR+GDFITLR VVDEVGSD VRFMML+RKN LDFDF KV EQ Sbjct: 379 CQLVKLMRDGAPVKMSKRSGDFITLREVVDEVGSDPVRFMMLFRKNDAPLDFDFKKVTEQ 438 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF----DTSELQLIVH 501 SK+NPVFYVQY +ARC S+ RQA + D + + +++ DT EL+LI Sbjct: 439 SKDNPVFYVQYGHARCCSVLRQAAEELSGQDLG----DSVLASADYSLLDDTGELELIGK 494 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 +AE+P+V+E A EP+++AFYL++LAS HGHW+ G+E P LRF+ ++N KLT+ R+ Sbjct: 495 MAEWPKVVEAAADTHEPHRIAFYLHELASSLHGHWNRGKELPHLRFIDSSNTKLTVARVA 554 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 LV AV+ +++SGL I+GV++P EM Sbjct: 555 LVRAVSLVLSSGLAILGVQAPEEM 578 >gi|192291567|ref|YP_001992172.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1] gi|192285316|gb|ACF01697.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1] Length = 592 Score = 612 bits (1577), Expect = e-173, Method: Compositional matrix adjust. Identities = 300/589 (50%), Positives = 408/589 (69%), Gaps = 6/589 (1%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 +LFA SR+ + + + I L RIV+E P+D +HG ++TNAAM+L++ Sbjct: 4 HLFARLLSRVHAVCAALIEEGALPAGIDLSRIVVEPPKDASHGDMATNAAMVLAKDAKAK 63 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A+ I +++ + +D V IAG GFINL L P+ + L +++ +G YGR+ +G G Sbjct: 64 PRDLADKIADKLRAEELIDQVAIAGPGFINLTLKPAVWAEALRAVLDAGAGYGRSTVGGG 123 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KVN+E+VSANPTGPMHVGHCR AV GD LA+L+ +GY VTREYYINDAGAQ++ LA S Sbjct: 124 EKVNVEYVSANPTGPMHVGHCRGAVFGDALANLLDTAGYAVTREYYINDAGAQVDVLARS 183 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 F RY++AL ++PEG YPG YLK VG+ L +Y + L + PE +WLP V+ ++ Sbjct: 184 AFLRYREALGETIGEIPEGLYPGDYLKPVGEALKAEYGAALNDMPEAQWLPTVRATAIAM 243 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM+ I+ DL ALNI H++F SE G + + + I+ L +G VY+G LPPPK + Sbjct: 244 MMEAIKGDLAALNITHEVFFSERSLIEGGRNRVAETIEFLRAKGDVYQGRLPPPKGAPVE 303 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + DR+Q LFR+T GDDVDRPLLKSDGSYTYFA+D+AY K K++ GF NM+ V G+DH Sbjct: 304 DYE-DREQTLFRATAYGDDVDRPLLKSDGSYTYFASDIAYHKVKFDAGFANMVDVWGADH 362 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY+KR++A AV+ K ++V + +LVRL R+G P+KMSKRAGDF+TLR VVDEVGSD Sbjct: 363 GGYIKRMQAAIQAVTAGKGALDVKIVQLVRLLRNGEPVKMSKRAGDFVTLREVVDEVGSD 422 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +VRFMML+RKN +LDFD KV EQSK+NPVFYVQY +AR SIFR A+++ PDL D Sbjct: 423 AVRFMMLFRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGHSIFRNAREVVPDLPEDSK 482 Query: 481 PRNVI----PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 R + P E D +EL+L+ LA YPR++E A A EP+++AFYL +LAS FH W Sbjct: 483 ARAAMLRQAPLERLNDPAELELLKRLALYPRIVEAAAQAHEPHRIAFYLNELASEFHALW 542 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +HGR+ P LRF+ N+ ++T RL +V V S++ SGL I+GV +P+EM Sbjct: 543 THGRDLPHLRFIINNDAEITRARLAMVQGVVSVLASGLAILGVTAPDEM 591 >gi|39935919|ref|NP_948195.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris CGA009] gi|81562421|sp|Q6N5W6|SYR_RHOPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|39649773|emb|CAE28295.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris CGA009] Length = 597 Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust. Identities = 298/589 (50%), Positives = 409/589 (69%), Gaps = 6/589 (1%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 +LFA SR+ + + + I L R+V+E P+D +HG ++TNAAM+L++ Sbjct: 9 HLFARLLSRVHAVCAALIEEGALPAGIDLSRVVVEPPKDASHGDMATNAAMVLAKDAKAK 68 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A+ I +++ + +D V IAG GFINL L P+ + L +++ +G YGR+ +G G Sbjct: 69 PRDLADKIADKLRAEELIDQVAIAGPGFINLTLKPAVWAEALRAVLDAGAGYGRSTVGGG 128 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KVN+E+VSANPTGPMHVGHCR AV GD LA+L+ +GY+VTREYYINDAGAQ++ LA S Sbjct: 129 EKVNVEYVSANPTGPMHVGHCRGAVFGDALANLLDTAGYDVTREYYINDAGAQVDVLARS 188 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 F RY++AL ++PEG YPG YLK VG+ L ++ + L + PE +WLP V+ ++ Sbjct: 189 AFLRYREALGETIGEIPEGLYPGDYLKPVGEALKAEHGAALKDMPEAQWLPTVRATAIAM 248 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM+ I+ DL ALNI H++F SE G + + + I+ L +G VY+G LPPPK + Sbjct: 249 MMEAIKGDLAALNITHEVFFSERSLIEGGRNRVAETIEFLRAKGDVYQGRLPPPKGAPVE 308 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + DR+Q LFR+T GDDVDRPLLKSDGSYTYFA+D+AY K K++ GF NM+ V G+DH Sbjct: 309 DYE-DREQTLFRATAYGDDVDRPLLKSDGSYTYFASDIAYHKVKFDAGFANMVDVWGADH 367 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY+KR++A AV+ K ++V + +LVRL R+G P+KMSKRAGDF+TLR VVDEVGSD Sbjct: 368 GGYIKRMQAAIQAVTAGKGALDVKIVQLVRLLRNGEPVKMSKRAGDFVTLREVVDEVGSD 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +VRFMML+RKN +LDFD KV EQSK+NPVFYVQY +AR SIFR A+++ PDL D Sbjct: 428 AVRFMMLFRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGHSIFRNAREVVPDLPEDSK 487 Query: 481 PRNVI----PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 R + P E D +EL+L+ LA YPR++E A A EP+++AFYL +LAS FH W Sbjct: 488 ARAAMLRQAPLERLNDPAELELLKRLALYPRIVEAAAQAHEPHRIAFYLNELASEFHALW 547 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +HGR+ P LRF+ N+ ++T RL +V V S++ SGL I+GV +P+EM Sbjct: 548 THGRDLPHLRFIINNDAEITRARLAMVQGVVSVLASGLAILGVTAPDEM 596 >gi|90424008|ref|YP_532378.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris BisB18] gi|109895028|sp|Q214X7|SYR_RHOPB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|90106022|gb|ABD88059.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris BisB18] Length = 597 Score = 610 bits (1572), Expect = e-172, Method: Compositional matrix adjust. Identities = 303/594 (51%), Positives = 405/594 (68%), Gaps = 16/594 (2%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 +LFA SR+ + + + + I L RIV+E P+D +HG ++TNAAM+L++ Sbjct: 9 HLFAVMLSRVHAVCEALAAEGALPAGIDLARIVVEPPKDASHGDMATNAAMVLAKEAKAK 68 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE I +++ D V +V +AG GFINL L P + L +++ G YGR+ +G G Sbjct: 69 PRDLAEKIAEKLRADDLVAAVEVAGPGFINLTLQPKVWSEALRTVLADGAGYGRSAVGAG 128 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KVN+E+VSANPTGPMHVGHCR AV GD LASL+ F+GY+VTREYYINDAGAQ++ LA S Sbjct: 129 EKVNVEYVSANPTGPMHVGHCRGAVFGDALASLLDFAGYDVTREYYINDAGAQVDVLARS 188 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 R ++AL ++PEG YPG YLK VG+ LA +Y +LL E +WLPI + S+ Sbjct: 189 ALLRTREALGEEIGEIPEGLYPGDYLKPVGEALAAEYGDKLLAMDEAEWLPIARAKSIAM 248 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM++IR DL ALNI H+ F SE GD + ID L +G VYEG LPPPK + Sbjct: 249 MMQMIRGDLAALNITHEEFFSERSLIAGDTDRVAATIDFLRGKGDVYEGRLPPPKGAPIE 308 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + DR+Q LFR+T GDDVDRPLLKSDGSYTYFA+D+AY K K++RGF NMI V GSDH Sbjct: 309 DYE-DREQTLFRATAYGDDVDRPLLKSDGSYTYFASDIAYHKTKFDRGFRNMIDVWGSDH 367 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY+KR++A AV+ + ++V + +LV+L R+G P+KMSKR+GDF+TLR VVDEVGSD Sbjct: 368 GGYIKRVQAAIKAVTGGQGALDVKIVQLVKLLRNGEPVKMSKRSGDFVTLREVVDEVGSD 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +VRFMML+RKN +LDFD KV EQSK+N VFYVQY +AR S+FR A+++ PDL Sbjct: 428 AVRFMMLFRKNDAVLDFDLAKVIEQSKDNAVFYVQYGHARGHSVFRNAREVVPDL----- 482 Query: 481 PRNVIPQ---------ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 P + + E DT+EL L+ LA YPR++E A +A EP+++AFYLY+LAS Sbjct: 483 PEETVARAAFLADAAVERLTDTAELGLLRQLALYPRIVEAAALAHEPHRIAFYLYELASE 542 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 FH W+ GR+ P LRF+ N+ ++T RL LV S++ SGL ++GV +P+EM Sbjct: 543 FHALWTRGRDLPHLRFIINNDAEITKARLALVQGAVSVLASGLAVLGVHAPDEM 596 >gi|115524697|ref|YP_781608.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris BisA53] gi|115518644|gb|ABJ06628.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris BisA53] Length = 597 Score = 609 bits (1570), Expect = e-172, Method: Compositional matrix adjust. Identities = 297/589 (50%), Positives = 405/589 (68%), Gaps = 6/589 (1%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 +LFA R+ + ++ + + + + L R+V+E P+D HG ++TNAAM+L++ Sbjct: 9 HLFALMLGRVHAVCRALEGEGALPQNLDLARVVVEPPKDPTHGDMATNAAMVLAKEAKAK 68 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE I A+++ D V SV +AG GFINL L+P L +++ G YGR+ +G Sbjct: 69 PRDLAEAIAAKLRADDLVASVEVAGPGFINLTLAPKVWADALRTVLAQGARYGRSSVGAK 128 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KVN+E+VSANPTGPMHVGHCR AV GD LASL+ F+GY+VTREYYINDAGAQ++ LA S Sbjct: 129 QKVNVEYVSANPTGPMHVGHCRGAVFGDALASLLDFAGYDVTREYYINDAGAQVDVLARS 188 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 RY++AL + ++PEG YPG YLK VG+ L ++ LL PE +WLP+V+ S+ Sbjct: 189 ALLRYREALGEDIGEIPEGLYPGDYLKPVGEALKAEHGDRLLALPEAEWLPLVRAKSIAM 248 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM++IR DL ALNI H+ F SE G + + I L +G VYEG LPPPK + Sbjct: 249 MMEMIRGDLAALNITHEEFFSERSLIEGGSDRVGETIAFLRAKGDVYEGRLPPPKGAPIE 308 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + DR+Q LFR+T GDDVDRPLLKSDGSYTYFA+D+AY K K++RG+ M+ V G+DH Sbjct: 309 DYE-DREQTLFRATAYGDDVDRPLLKSDGSYTYFASDIAYHKTKFDRGYRTMVDVWGADH 367 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY+KR++A AV++ K ++V + +LV+L R+G P+KMSKR+GDF+TLR VV+EVGSD Sbjct: 368 GGYIKRVQAAIKAVTDGKGDLDVKIVQLVKLLRNGEPVKMSKRSGDFVTLREVVEEVGSD 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 + RFMML+RKN +LDFD KV EQSK+N VFYVQY +AR S+FR A+++ PDL + Sbjct: 428 ATRFMMLFRKNDAVLDFDLAKVIEQSKDNAVFYVQYGHARGHSVFRNAREVIPDLPEEAA 487 Query: 481 PRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 R Q++ DT+EL L+ LA YPRV+E A +A EP+++AFYLYDLAS FH W Sbjct: 488 ARAAFLQDAAVERLTDTAELDLLRRLALYPRVVEAAALAHEPHRVAFYLYDLASEFHALW 547 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + GR+ P LRF+ N+ +T RL LV S+I SGL ++GV++P EM Sbjct: 548 TRGRDLPHLRFIINNDALITKARLALVQGAVSVIASGLAVLGVDAPTEM 596 >gi|85716513|ref|ZP_01047484.1| arginyl-tRNA synthetase, class Ic [Nitrobacter sp. Nb-311A] gi|85696702|gb|EAQ34589.1| arginyl-tRNA synthetase, class Ic [Nitrobacter sp. Nb-311A] Length = 597 Score = 608 bits (1568), Expect = e-172, Method: Compositional matrix adjust. Identities = 302/589 (51%), Positives = 407/589 (69%), Gaps = 6/589 (1%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 +LFAD +R+ + + + + L RIV+E P+D AHG ++TNAAM+L++ Sbjct: 9 HLFADVLARVHKACAALAEEGALPSGLDLTRIVVEPPKDAAHGDMATNAAMVLAKDAKAK 68 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE IV +++ D +++ IAG GFINL L +L ++ G YGR+ IG G Sbjct: 69 PRDLAERIVTKLRADDLIENAEIAGPGFINLTLRLPVWFDVLRDVLRDGEGYGRSAIGGG 128 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KVN+E+VSANPTGPMHVGHCR AV GD LASL++F+GY+VTREYYINDAG+Q++ LA S Sbjct: 129 EKVNVEYVSANPTGPMHVGHCRGAVFGDALASLLSFAGYDVTREYYINDAGSQVDVLARS 188 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 F RY++AL + ++P+G YPG YLK VG+ LA ++ L+ PE WLP+V+ ++ Sbjct: 189 AFLRYREALGEDIGEIPDGLYPGDYLKPVGRALAAEHGDSLVKAPEAGWLPLVRAKAIGM 248 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM++IR DL ALNI+HD+F SE G+ + + ID L +G VYEG LPPPK + Sbjct: 249 MMEMIRGDLAALNIRHDVFFSERSLIEGNADRVAETIDFLREKGDVYEGRLPPPKGAPVE 308 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + DR+Q LFR+T GDDVDRPL KSDG YTYFA+D+AY K K++RGF NM+ V G+DH Sbjct: 309 DYE-DREQTLFRATAYGDDVDRPLKKSDGGYTYFASDIAYHKTKFDRGFHNMVDVWGADH 367 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY+KR++A AV+ +A ++V + +LV+L R+G P+KMSKRAGDF+TLR VVDEVGSD Sbjct: 368 GGYIKRVQAAIKAVTSGRATLDVKIVQLVKLLRNGEPVKMSKRAGDFVTLREVVDEVGSD 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +VRFMML+RKN +LDFD KV EQSK+NPVFYVQY +AR SIFR A+++FPDL Sbjct: 428 AVRFMMLFRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGFSIFRNAREVFPDLPEADA 487 Query: 481 PR----NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 R E D +EL L+ LA YPR +E A A EP+++AFYLYDLAS FH W Sbjct: 488 ARKQFLGTADMERLSDPAELGLLRRLALYPRTVEAAAAAHEPHRIAFYLYDLASEFHTLW 547 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + GR+ P LRF+ N+ ++T RL LV V +++ SGL ++GV +P EM Sbjct: 548 TKGRDLPHLRFIINNDAQITRARLALVQGVVAVLASGLTVLGVHAPTEM 596 >gi|86749867|ref|YP_486363.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris HaA2] gi|109895027|sp|Q2IWF8|SYR_RHOP2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|86572895|gb|ABD07452.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris HaA2] Length = 597 Score = 608 bits (1567), Expect = e-172, Method: Compositional matrix adjust. Identities = 293/561 (52%), Positives = 396/561 (70%), Gaps = 5/561 (0%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 L RIV+E P+D +HG ++TNAAM+L++ P +AE I +++ + +D+V IAG GF Sbjct: 37 LSRIVVEPPKDASHGDMATNAAMVLAKDAKAKPRDLAEKIAEKLRAEDQIDTVSIAGPGF 96 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 INL L P+ + L +++ +G YGR+ +G KVNIE+VSANPTGPMHVGHCR AV GD Sbjct: 97 INLTLKPAVWAEALRAVLDAGAGYGRSRVGGAEKVNIEYVSANPTGPMHVGHCRGAVFGD 156 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 LA+L+ +GY+VTREYYINDAGAQ++ LA S F RY++AL + +PEG YPG YL Sbjct: 157 ALANLLETAGYDVTREYYINDAGAQVDVLARSAFLRYREALGEDIGAIPEGLYPGDYLVP 216 Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 VG L ++ + L PE +WLP+V+ S+ MM++I+ DL AL I H++F SE G Sbjct: 217 VGTALVAEHGAALKELPEPQWLPMVRAKSIAMMMEMIKADLAALAITHEVFFSERSLIEG 276 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 + + + D ID L +G VY+G LPPPK + + DR+Q LFR+T GDDVDRPLLKSD Sbjct: 277 ERNRVADTIDFLRAKGDVYQGRLPPPKGAPVEDYE-DREQTLFRATAYGDDVDRPLLKSD 335 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 G+YTYFA+D+AY K K++ GF NM+ V G+DH GY+KR++A AV+ K ++V + +L Sbjct: 336 GTYTYFASDIAYHKVKFDAGFGNMVDVWGADHGGYIKRMQAAITAVTSGKGALDVKIVQL 395 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 VRL R+G P+KMSKR+GDF+TLR VVDEVGSD+VRFMML+RKN +LDFD KV EQSK+ Sbjct: 396 VRLLRNGEPVKMSKRSGDFVTLREVVDEVGSDAVRFMMLFRKNDAVLDFDLAKVIEQSKD 455 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE----FDTSELQLIVHLAE 504 NPVFYVQY +AR SIFR AK++FPDL R +++ D SEL L+ LA Sbjct: 456 NPVFYVQYGHARGHSIFRNAKELFPDLPDATEARIAFLKDANAERLTDPSELDLLRRLAL 515 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 +PR +E A +A EP+++AFYLYDLAS FH W+ GR+ P LRF+ N+ ++T RL +V Sbjct: 516 FPRTVEAAALAHEPHRVAFYLYDLASEFHALWTRGRDLPHLRFIINNDAEITKARLAMVQ 575 Query: 565 AVASIINSGLNIIGVESPNEM 585 V S++ SGL I+GV +P+EM Sbjct: 576 GVVSVLASGLAILGVTAPDEM 596 >gi|91977265|ref|YP_569924.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris BisB5] gi|91683721|gb|ABE40023.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris BisB5] Length = 597 Score = 605 bits (1559), Expect = e-171, Method: Compositional matrix adjust. Identities = 292/561 (52%), Positives = 395/561 (70%), Gaps = 5/561 (0%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 L RIV+E P+D +HG ++TNAAM+L++ P +A I +++ + + V IAG GF Sbjct: 37 LARIVVEPPKDASHGDMATNAAMVLAKDAKAKPRDLANKIAEKLRAEDQIAEVAIAGPGF 96 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 INL L P+ + L +++ G YGR+ +G KVN+E+VSANPTGPMHVGHCR AV GD Sbjct: 97 INLTLKPAVWAQALRAVLDEGSAYGRSRVGGSEKVNVEYVSANPTGPMHVGHCRGAVFGD 156 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 LA+L+ +GY+VTREYYINDAGAQ++ LA S F RY++AL + +P+G YPG YL Sbjct: 157 ALANLLDAAGYDVTREYYINDAGAQVDVLARSAFLRYREALGEDIGAIPDGLYPGDYLVP 216 Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 VG ELA ++ S L P+ +WLP+V+ S+ MM++I+ DL AL I H++F SE G Sbjct: 217 VGAELAAEHGSALKEMPDSQWLPLVRAKSIAMMMEMIKGDLAALAITHEVFFSERSLIEG 276 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 D + + D ID L +G VY+G LPPPK + + DR+Q LFR+T GDDVDRPLLKSD Sbjct: 277 DRNRVADTIDFLRAKGDVYQGRLPPPKGAPVEDYE-DREQTLFRATAYGDDVDRPLLKSD 335 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 GSYTYFA+D+AY K K++ GF NM+ V G+DH GY+KR++A AV+E K ++V + +L Sbjct: 336 GSYTYFASDIAYHKVKFDAGFGNMVDVWGADHGGYIKRMQAAITAVTEGKGALDVKIVQL 395 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 VRL R+G P+KMSKRAGDF+TLR VVDEVGSD+VRFMML+RKN +LDFD KV EQSK+ Sbjct: 396 VRLLRNGEPVKMSKRAGDFVTLREVVDEVGSDAVRFMMLFRKNDAVLDFDLAKVIEQSKD 455 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE----FDTSELQLIVHLAE 504 NPVFYVQY +AR SIFR A++ FPDL R ++++ D +EL L+ LA Sbjct: 456 NPVFYVQYGHARGHSIFRNAREAFPDLPESTDARIAFLKDAKTERLTDPAELDLLRRLAL 515 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 +PR +E A +A EP+++AFYLYDLAS FH W+ GR+ P LRF+ N+ ++T RL +V Sbjct: 516 FPRTVEAAALAHEPHRVAFYLYDLASEFHALWTRGRDLPHLRFIINNDAEITKARLAMVQ 575 Query: 565 AVASIINSGLNIIGVESPNEM 585 V S++ SGL ++GV +P+EM Sbjct: 576 GVVSVLASGLAMLGVTAPDEM 596 >gi|319408659|emb|CBI82314.1| Arginyl-tRNA synthetase [Bartonella schoenbuchensis R1] Length = 534 Score = 604 bits (1558), Expect = e-170, Method: Compositional matrix adjust. Identities = 290/537 (54%), Positives = 396/537 (73%), Gaps = 6/537 (1%) Query: 51 MILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI 110 M+L++ +GL+P +AE I+ +K D ++ + +AG GFIN+ L+ S+ + +L S++ +GI Sbjct: 1 MVLAKSVGLNPRILAEKIIELLKNDQSIECINVAGPGFINIKLTRSFWQDVLKSMIEAGI 60 Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170 YGR+ IG+G +VN+E+VSANPTGPMHVGHCR AV+GD L++L+ F GY VT+EYYINDA Sbjct: 61 AYGRSQIGQGKRVNVEYVSANPTGPMHVGHCRGAVIGDVLSNLLQFVGYNVTKEYYINDA 120 Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230 G Q+ LA SV RY+QAL +++PEG YPG YL +G+ L ++ +LL + + L Sbjct: 121 GGQVEVLAHSVLLRYRQALGQTINEIPEGLYPGEYLIPLGQSLVQEFGDQLLTIDKSEAL 180 Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290 IVK+ ++ AMM +IRDDL ALNIQHD+F SE + + IR+ I++L GY+Y+GI Sbjct: 181 SIVKERAIDAMMAMIRDDLSALNIQHDVFFSERMLYADNAQAIRNAINDLTLNGYIYKGI 240 Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350 L PPK K + + +Q LFRST VGDD DR L+KS+GSYTYFAAD+AYF+ K+ R FD Sbjct: 241 LSPPKGKILEDWE-PHEQTLFRSTDVGDDQDRVLIKSNGSYTYFAADIAYFRDKFNRHFD 299 Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 MIY++G+DH+GYVKRLEAVA A+S KA++ V LC+LV+L+R+G P++MSKR G F+TL Sbjct: 300 EMIYILGADHAGYVKRLEAVAKAISGDKAKLAVFLCQLVKLFRNGQPVRMSKREGSFVTL 359 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R VV+EVG D VRFMML+RK LDFDF KV EQSK+NP+FYVQYA ARC S+FRQA++ Sbjct: 360 RDVVEEVGCDPVRFMMLYRKCEAPLDFDFTKVTEQSKDNPIFYVQYASARCHSVFRQAQE 419 Query: 471 IFPDLDFDLFPRNV-IPQ-ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 L D N+ IP + D SE+ LI LAEYPR+IE A I +EP++LAFYLYDL Sbjct: 420 ---SLHIDNLSSNIMIPYLDKLIDDSEISLIRKLAEYPRIIEQAVIHKEPHRLAFYLYDL 476 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 AS FHGHW+ G +NP LRF + +++L++ RL L+ AV +I++SGL I+G+++ EM Sbjct: 477 ASNFHGHWNKGNDNPDLRFTKLEDKELSLARLGLIQAVINILSSGLQIVGIKASTEM 533 >gi|316933987|ref|YP_004108969.1| arginyl-tRNa synthetase [Rhodopseudomonas palustris DX-1] gi|315601701|gb|ADU44236.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris DX-1] Length = 592 Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust. Identities = 297/589 (50%), Positives = 405/589 (68%), Gaps = 6/589 (1%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 +LFA SR+ + + + I L RIV+E P+D +HG ++TNAAM+L++ Sbjct: 4 HLFARLLSRVHAVCAGLIEEGALPAGIDLSRIVVEPPKDASHGDMATNAAMVLAKDAKAK 63 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A+ I +++ + +D V IAG GFINL L P+ + L +++ +G YGR+ +G G Sbjct: 64 PRDLADKIADKLRAEELIDQVAIAGPGFINLTLKPAVWAEALRAVLDAGTGYGRSAVGGG 123 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KVN+E+VSANPTGPMHVGHCR AV GD LA+L+ +G+ VTREYYINDAGAQ++ LA S Sbjct: 124 EKVNVEYVSANPTGPMHVGHCRGAVFGDALANLLDTAGFAVTREYYINDAGAQVDVLARS 183 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 F RY++AL ++PEG YPG YLK VG L ++ + L PE +WLP V+ ++ Sbjct: 184 AFLRYREALGEAIGEIPEGLYPGDYLKPVGVALKAEHGAALKELPEAQWLPTVRAKAIAM 243 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM+ I+ DL ALNI H++F SE G + + + I+ L +G VY+G LPPPK + Sbjct: 244 MMEAIKGDLAALNITHEVFFSERSLIEGGRNRVAETIEFLRAKGDVYQGRLPPPKGAPVE 303 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + DR+Q LFR+T GDDVDRPLLKSDGSYTYFA+D+AY K K++ GF NM+ V G+DH Sbjct: 304 DYE-DREQTLFRATAYGDDVDRPLLKSDGSYTYFASDIAYHKVKFDAGFANMVDVWGADH 362 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY+KR++A AV+ K ++V + +LVRL R+G P+KMSKRAGDF+TLR VVDEVG D Sbjct: 363 GGYIKRMQAAIQAVTAGKGALDVKIVQLVRLLRNGEPVKMSKRAGDFVTLREVVDEVGFD 422 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +VRFMML+RKN +LDFD KV EQSK+NPVFYVQY +AR SIFR A+++ PDL D Sbjct: 423 AVRFMMLFRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGHSIFRNAREVVPDLPEDSK 482 Query: 481 PRNVI----PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 R + P E D +EL+L+ LA YPR++E A A EP+++AFYL +LAS FH W Sbjct: 483 ARAAMLRQAPLERLSDPAELELLKRLALYPRIVEAAAQAHEPHRIAFYLNELASEFHALW 542 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +HGR+ P LRF+ N+ ++T RL +V V S++ SGL I+GV +P+EM Sbjct: 543 THGRDLPHLRFIINNDAEITRARLAMVQGVVSVLASGLAILGVTAPDEM 591 >gi|75675999|ref|YP_318420.1| arginyl-tRNA synthetase, class Ic [Nitrobacter winogradskyi Nb-255] gi|109895011|sp|Q3SRM3|SYR_NITWN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|74420869|gb|ABA05068.1| arginyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255] Length = 597 Score = 602 bits (1551), Expect = e-170, Method: Compositional matrix adjust. Identities = 300/589 (50%), Positives = 406/589 (68%), Gaps = 6/589 (1%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 +LFAD +R+ + + + + L RIV+E PRD +HG ++TNAAM+L++ Sbjct: 9 HLFADVLARVHRACAALAEEGALPSGLDLARIVVEPPRDASHGDMATNAAMVLAKDAKAK 68 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE IV +++ D ++S IAG GFINL L +L ++ G YGR+ IG G Sbjct: 69 PRDLAERIVTKLRADDLIESADIAGPGFINLTLKLPVWADVLRDVLRDGEGYGRSAIGAG 128 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KVN+E+VSANPTGPMHVGHCR AV GD LASL++F+GY+VTREYYINDAG+Q++ LA S Sbjct: 129 EKVNVEYVSANPTGPMHVGHCRGAVFGDALASLLSFAGYDVTREYYINDAGSQVDVLARS 188 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 F RY++AL + ++P+G YPG YLK VG+ LA + L+ PE +WL +V+ ++ Sbjct: 189 AFLRYREALGEDIGEIPDGLYPGDYLKPVGQALAAGHGDSLVKAPEAEWLGLVRAKAIGM 248 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM++IR DL ALNI+HD+F SE G + + I L +G VYEG LPPPK + Sbjct: 249 MMEMIRGDLAALNIRHDVFFSERSLIDGSADRVAETIGFLREKGDVYEGRLPPPKGAPVE 308 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + DR+Q LFR+T GDDVDRPL KSDG YTYFA+D+AY K K++RGF NM+ V G+DH Sbjct: 309 DYE-DREQTLFRATAYGDDVDRPLKKSDGGYTYFASDIAYHKTKFDRGFHNMVDVWGADH 367 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY+KR++A AV+ K ++V + +LV+L R+G P+KMSKRAGDF+TLR VV+EVGSD Sbjct: 368 GGYIKRVQAAIKAVTSGKGTLDVKIVQLVKLLRNGEPVKMSKRAGDFVTLREVVEEVGSD 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFDL 479 +VRFMML+RKN +LDFD +V EQSK+NPVFYVQY +AR SIFR A+++FPDL + D Sbjct: 428 AVRFMMLFRKNDAVLDFDLARVIEQSKDNPVFYVQYGHARGFSIFRNAREVFPDLPEADA 487 Query: 480 FPRNVIPQ---ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 R + E D +EL L+ LA YPR +E A A EP+++AFYLYDLAS FH W Sbjct: 488 ERRQFLGTADLERLSDPAELGLLRKLALYPRTVEAAAAAHEPHRIAFYLYDLASEFHALW 547 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + GR+ P LRF+ N+ ++T RL LV V +++ SGL ++GV +P EM Sbjct: 548 TKGRDLPHLRFIINNDAQITRARLALVQGVVAVLASGLTVLGVHAPTEM 596 >gi|218460770|ref|ZP_03500861.1| arginyl-tRNA synthetase [Rhizobium etli Kim 5] Length = 464 Score = 599 bits (1544), Expect = e-169, Method: Compositional matrix adjust. Identities = 286/465 (61%), Positives = 361/465 (77%), Gaps = 4/465 (0%) Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ LA SV Sbjct: 2 KVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVLARSV 61 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 F RY++AL ++P G YPG YL VG+ LA Y L N PE +W+PIVKD ++ AM Sbjct: 62 FLRYREALGERIGEIPSGLYPGDYLVPVGQSLAADYGVRLHNMPEVQWMPIVKDRTISAM 121 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 M +IR+DL ALN+ HDIF SE H + IR I++L +GYVY+G LPPPK + + Sbjct: 122 MVMIREDLAALNVHHDIFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQLPED 181 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+DH Sbjct: 182 WE-DREQTLFRSTEVGDDMDRPLIKSDGSYTYFAADVAYFKNKFDRGFDEMIYVLGADHG 240 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 GYVKRLEAVA VS+ KA++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG DS Sbjct: 241 GYVKRLEAVARGVSDGKAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVGRDS 300 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 VRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA++ FP L D+ Sbjct: 301 VRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSVFRQAREAFPGL--DVSS 358 Query: 482 RNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 ++ + D +ELQL+ LAE+PRV+E A +QEP+++AFYLYDLAS FH HW+ G+ Sbjct: 359 EDLAKAVAGIGDPAELQLVAKLAEFPRVVEAAAQSQEPHRIAFYLYDLASSFHAHWNKGK 418 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + LRFV NR+ ++ RL LV+AVAS++ SGL I G +P+EM Sbjct: 419 DQTELRFVNDKNRESSIARLGLVYAVASVLKSGLAITGTAAPDEM 463 >gi|148255782|ref|YP_001240367.1| arginyl-tRNA synthetase [Bradyrhizobium sp. BTAi1] gi|166232760|sp|A5EJW7|SYR_BRASB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|146407955|gb|ABQ36461.1| arginyl-tRNA synthetase [Bradyrhizobium sp. BTAi1] Length = 598 Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust. Identities = 300/592 (50%), Positives = 407/592 (68%), Gaps = 9/592 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 ++LFAD +R+ + + I + R+V+E PRD +HG ++TNAAM+L++ Sbjct: 8 LHLFADVLARVHAICAALAKDGNWPEGIDVSRVVVEPPRDPSHGDMATNAAMVLAKEAKA 67 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR--NLI 117 P +AE I R++ D V V +AG GFINL L P + L +I+ G YGR ++ Sbjct: 68 KPRDLAEAIAERLRADELVAKVDVAGPGFINLTLHPVVWARQLGTILRDGDAYGRIAPVV 127 Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 G KVN+E+VSANPTGPMHVGHCR AV GD L SL+ F+G +VTREYYINDAGAQ++ L Sbjct: 128 G-APKVNVEYVSANPTGPMHVGHCRGAVFGDALCSLLQFAGRDVTREYYINDAGAQVDVL 186 Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237 A S F RY++AL +PEG YPG YLK VG+ LA ++ L PE +WLPIV+D + Sbjct: 187 ARSAFLRYREALGEEIGAIPEGLYPGDYLKPVGQALAAEHGDRLKAMPEAQWLPIVRDKA 246 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 + MM I+DDL ALNI+HD+F SE G + + + I+ L +G VYEG LPPPK Sbjct: 247 IAMMMAEIKDDLAALNIRHDVFFSERSLIAGSTNKVAETIEFLRERGDVYEGRLPPPKGA 306 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 + + DR+QLLFR+T GDDVDRPL+KSDGSYTYFA+D+A + K+ERGF ++I V G Sbjct: 307 PVEDWE-DREQLLFRATAYGDDVDRPLIKSDGSYTYFASDIANHRHKFERGFADLIDVFG 365 Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 +DH GY+KR++A AV+ +A ++V + +LV+L R+G P+KMSKR+GDF+TLR VVDEV Sbjct: 366 ADHGGYIKRMQAAVKAVTAAQAVLDVKVVQLVKLLRNGEPVKMSKRSGDFVTLREVVDEV 425 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G D+VRFMML+RKN +LDFD KV EQS++NPVFYVQY +AR SIFR A+D FP L Sbjct: 426 GRDAVRFMMLYRKNDAVLDFDLAKVIEQSRDNPVFYVQYGHARGHSIFRNARDSFPSLPV 485 Query: 478 DLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 + R ++++ D SE+ L+ LA YPR +E+A +A EP+++AFYLYDLAS FH Sbjct: 486 EEGARLAFLRQAKLEKLADPSEIDLLKRLALYPRTVESAALAHEPHRVAFYLYDLASEFH 545 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W+ GR+ P LRF+ ++ +LTM RL +V V S++ SGL I+GV +P+ M Sbjct: 546 ALWTRGRDLPYLRFIIDDDAELTMARLAMVQGVVSVLASGLAILGVNAPDAM 597 >gi|154248165|ref|YP_001419123.1| arginyl-tRNA synthetase [Xanthobacter autotrophicus Py2] gi|238686740|sp|A7IN73|SYR_XANP2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|154162250|gb|ABS69466.1| arginyl-tRNA synthetase [Xanthobacter autotrophicus Py2] Length = 586 Score = 592 bits (1526), Expect = e-167, Method: Compositional matrix adjust. Identities = 291/586 (49%), Positives = 396/586 (67%), Gaps = 2/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M ++A F+ ++ + + + + K + L R+V+E PRD +HG L+TNAAM+L++ GL Sbjct: 1 MNVYAIFADHVREAVAALVAEGIIAKDLDLARVVVEPPRDASHGDLATNAAMVLAKDAGL 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +AE I ++ V V +AG GFIN+ L ++ +L++++ G+++GR+ +G Sbjct: 61 KPRELAERIAGKLGTVAGVKKVDVAGPGFINIALDGTFWPVVLAAVLTQGLDFGRSALGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AV GD LA LM F+G+ VT+EYYINDAGAQ++ LA Sbjct: 121 GEKVNVEYVSANPTGPMHVGHCRGAVFGDALARLMDFAGFAVTKEYYINDAGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY++AL ++PEG YPG YL VG++LA + L E WLP+V+ ++ Sbjct: 181 SAFLRYREALGEAIGEIPEGLYPGDYLVPVGQKLAAAHGPALKEKSETDWLPLVRAEAIA 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM IR+DL AL I D+F SE G + I+ L G VYEG LPPPK Sbjct: 241 TMMVAIREDLAALGISFDVFFSERSLSTGAVDRVGAAIEALRASGEVYEGRLPPPKGAPI 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST GDDVDRPL KSDGSYTYFA D+AY K K +RGF MI V G+D Sbjct: 301 EDWE-DREQTLFRSTDFGDDVDRPLKKSDGSYTYFAGDIAYHKDKVDRGFLKMIDVWGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A AVS +A ++V L +LVRL+R G P++MSKR+G F+TLR VVDEVG Sbjct: 360 HGGYVKRMQAAVKAVSGGRATLDVELIQLVRLFRAGEPVRMSKRSGSFVTLREVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+VRFMML+RKN LDFD KV EQS+ENPVFYVQYA+AR +SI R A + F DL Sbjct: 420 DAVRFMMLFRKNDAPLDFDLAKVIEQSRENPVFYVQYAHARAKSILRNAAEEFADLPQQA 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 P D E+ L+ LA +PR++E A A+EP++++F+L++LAS FHG W+ G Sbjct: 480 ASFATAPLARLDDEGEITLLRRLASWPRLVEQAAGAREPHRISFFLHELASEFHGQWNRG 539 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ P LRF+ N+R+LT RL LVH VA+++ SGL ++GV + +EM Sbjct: 540 KDLPHLRFIIENDRELTSARLALVHGVATVLASGLKVLGVTAVDEM 585 >gi|170740711|ref|YP_001769366.1| arginyl-tRNA synthetase [Methylobacterium sp. 4-46] gi|254782975|sp|B0UI81|SYR_METS4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|168194985|gb|ACA16932.1| arginyl-tRNA synthetase [Methylobacterium sp. 4-46] Length = 586 Score = 589 bits (1518), Expect = e-166, Method: Compositional matrix adjust. Identities = 300/589 (50%), Positives = 403/589 (68%), Gaps = 8/589 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FA F R+ L + ++ + + L R+V+E PRD HG L+TNAA++L++ Sbjct: 1 MNIFAAFEERIGEALATLTRAGQLPEGLDLGRVVVEPPRDPGHGDLATNAALVLAKEART 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +AEL+ A ++ DP V +AG GF+NL L+P +++ + + SG +GR Sbjct: 61 NPKALAELLAAELRQDPRVTEASVAGPGFLNLRLAPEVFAEVVRAALASGEAFGRGARRP 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G VN+E+VSANPTGPMHVGH R AV GD LA+L+A SG EV REYYINDAGAQ++ LA Sbjct: 121 GL-VNVEYVSANPTGPMHVGHGRGAVFGDALANLLAASGREVVREYYINDAGAQVDVLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++AL + +PEG YPG YLK VG+ LA+ + LL PE WLP+V+D+++ Sbjct: 180 SAYLRYREALGDAIGAIPEGLYPGDYLKPVGRRLAETHGRALLREPESAWLPVVRDFAIA 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-IIDNLARQGYVYEGILPPPKSKT 298 AMM +IRDDL AL I+HD+F SE G +I L +G VY G LPPPK + Sbjct: 240 AMMDLIRDDLAALGIRHDVFFSERTLQGGGDGGAVGALIAELREKGLVYVGRLPPPKGQL 299 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + + DR Q LFRST GDD+DRPLLKSDG+YTYFA+D+AY K RG ++I V+G+ Sbjct: 300 PEDWE-DRDQTLFRSTAFGDDIDRPLLKSDGTYTYFASDIAYHASKVARGATDLIDVLGA 358 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GYVKR++A AVS+ +A ++V LC+LVRL R G P+KMSKRAG+F+TLR V+DEVG Sbjct: 359 DHGGYVKRMQAAVRAVSDGRASLDVKLCQLVRLLRGGEPVKMSKRAGEFVTLREVIDEVG 418 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D VRFMML+RKN LDFD KV EQSK+NPVFYVQYA+AR S+FRQA++ FP D Sbjct: 419 RDPVRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYAHARTASVFRQAREAFP--GED 476 Query: 479 LFPRNVIPQESEF--DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 L P+ + + D+ E ++ +A+YPRVIE A A EP++LAFYLY+LAS FH W Sbjct: 477 LSPQALAGADLSLLRDSGEADIMRLVAQYPRVIEAAGSAHEPHRLAFYLYELASAFHSFW 536 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + G++ P+LRFV +RK T+ RL LV A+ ++ SGL I+GV +P+EM Sbjct: 537 NKGKDLPQLRFVNQTDRKSTLSRLALVAALRGVLASGLGILGVTAPDEM 585 >gi|146340981|ref|YP_001206029.1| arginyl-tRNA synthetase [Bradyrhizobium sp. ORS278] gi|166232761|sp|A4YV78|SYR_BRASO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|146193787|emb|CAL77804.1| arginyl-tRNA synthetase [Bradyrhizobium sp. ORS278] Length = 598 Score = 588 bits (1517), Expect = e-166, Method: Compositional matrix adjust. Identities = 298/590 (50%), Positives = 406/590 (68%), Gaps = 7/590 (1%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 YLFAD +R+ + + I R+V+E PRD +HG ++TNAAM+L++ Sbjct: 9 YLFADMLARVHAICAALAKSGGWPEGIDFSRVVVEPPRDPSHGDMATNAAMVLAKEAKAK 68 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE I R++ D V V +AG GFINL L PS K L++I+ G YGR G Sbjct: 69 PRDLAEQIAERLRADELVAKVDVAGPGFINLTLQPSVWSKALATILREGAAYGRVAPVPG 128 Query: 121 T-KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 KVN+E+VSANPTGPMHVGHCR AV GD L+SL+ F+G +VTREYYINDAGAQ++ LA Sbjct: 129 APKVNVEYVSANPTGPMHVGHCRGAVFGDALSSLLQFAGRDVTREYYINDAGAQVDVLAR 188 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++AL + +PEG YPG YLK VG+ L ++ +L P+ +WLPIV+D ++ Sbjct: 189 SAYLRYREALGEDIGAIPEGLYPGDYLKPVGQALKTEHGDKLKAMPDAQWLPIVRDKAIA 248 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM I+DDL ALNI+HD+F SE G + + + ID L +G VYEG LPPPK Sbjct: 249 MMMDEIKDDLAALNIRHDVFFSERSLITGGNNKVAETIDFLRERGDVYEGRLPPPKGAPV 308 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+QLLFR+T GDDVDRPL+KSDGSYTYFA+D+A + K+ERGF ++I V G+D Sbjct: 309 EDWE-DREQLLFRATAFGDDVDRPLIKSDGSYTYFASDIANHRHKFERGFADLIDVFGAD 367 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+KR++A AV+ +A ++V + +LV+L R+G P+KMSKR+GDF+TLR VVDEVG Sbjct: 368 HGGYIKRMQAAVKAVTAAQATLDVKVVQLVKLLRNGEPVKMSKRSGDFVTLREVVDEVGR 427 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+VRFMML+RKN +LDFD KV EQSK+NPVFYVQY +AR SIFR A++ P+L + Sbjct: 428 DAVRFMMLYRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGHSIFRNARESLPELPEEE 487 Query: 480 FPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 R +E++ D++E L+ LA YPR +E+A +A EP+++AFYLY+LAS FH Sbjct: 488 GARIAFLREAKLERLADSAEHDLLKRLALYPRTVESAAMAHEPHRIAFYLYELASEFHAL 547 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W+ GR+ P LRF+ ++ +LT RL +V V S++ SGL I+GV +P+ M Sbjct: 548 WTRGRDLPYLRFIIDDDAELTKARLAMVQGVVSVLASGLAILGVNAPDAM 597 >gi|182679625|ref|YP_001833771.1| arginyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC 9039] gi|254782941|sp|B2IJG9|SYR_BEII9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|182635508|gb|ACB96282.1| arginyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC 9039] Length = 590 Score = 585 bits (1508), Expect = e-165, Method: Compositional matrix adjust. Identities = 290/590 (49%), Positives = 393/590 (66%), Gaps = 6/590 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSR---P 56 M +F +F +R+ L+ I ++ + + L R V+E PR+ AHG L+ NAAM+ ++ P Sbjct: 1 MNIFTEFHARIAAILRGIIGSGRLPEDLDLTRFVVEPPREAAHGDLAANAAMVYAKEAKP 60 Query: 57 LGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116 +P +A I + D DV +AG GFIN+ L P + ++L + + G ++GR Sbjct: 61 AFANPRQLAVEIAVALAEDGDVAEAEVAGPGFINIRLKPEFFGRLLGAALEQGSDFGRPA 120 Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176 K+N+E+VSANPTGPMHVGH R AV GD LA+L+AF+G+ VTREYYINDAGAQ++ Sbjct: 121 TAAQEKINVEYVSANPTGPMHVGHGRGAVFGDALANLLAFAGFGVTREYYINDAGAQVDV 180 Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236 LA S RY++AL +PEG YPG YLK VG LA + E+WL I + Sbjct: 181 LARSAHLRYREALGETIGAIPEGLYPGDYLKSVGASLAQAHGDTYRGSNGEEWLEIFRLA 240 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRG-DPSPIRDIIDNLARQGYVYEGILPPPK 295 ++ MM +IRDDL ALNI H++F SE R D + I L +G VYEG LPPPK Sbjct: 241 AIDGMMAMIRDDLAALNITHEVFFSERSLTRSEDGDQVAAAIAFLRDRGLVYEGRLPPPK 300 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 + + + DR+Q+LF+ST GDDVDRPL KSDG+YTYFA+D+AY K K +RG+ +I V Sbjct: 301 GQAIEDWE-DREQVLFKSTDFGDDVDRPLKKSDGTYTYFASDIAYHKTKIDRGYSVLIDV 359 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 G+DH GYVKR+ A A+SE + ++V LC+LV+L R G P+KMSKRAGDF+TLR VVD Sbjct: 360 WGADHGGYVKRMAAAVKALSEGRVTLDVKLCQLVKLMRGGEPVKMSKRAGDFVTLREVVD 419 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 EVG D+VRFMML+RKN +L+FD KV EQSK+NPVFYVQYA+AR +S+FRQA + PDL Sbjct: 420 EVGVDAVRFMMLFRKNDAVLEFDLAKVIEQSKDNPVFYVQYAHARVKSVFRQAATLLPDL 479 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 D L D E +LI +A++PRV+E A +A EP+++AFYL+DLAS H H Sbjct: 480 DCSLAALKTADFSLLGDEGEARLIKIIAQFPRVVEGAALAHEPHRIAFYLHDLASELHAH 539 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W+ G++ P LRF+ R LT+ RL LVH +A ++ SGL+++GV +P+EM Sbjct: 540 WTRGKDQPHLRFIYEERRDLTLARLALVHIMAEVLASGLSLLGVSAPSEM 589 >gi|312114440|ref|YP_004012036.1| arginyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100] gi|311219569|gb|ADP70937.1| arginyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100] Length = 585 Score = 585 bits (1508), Expect = e-165, Method: Compositional matrix adjust. Identities = 288/588 (48%), Positives = 400/588 (68%), Gaps = 7/588 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCK-IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F +F +R+++ L ++ + + E LD V+E PR HG L+TNAAM+L++P Sbjct: 1 MNIFQNFETRIRDILLQMQAEGMLPEDAKLDTFVVEPPRQATHGDLATNAAMVLAKPARQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +AE I A++ DPDV+ V IAG GFINL L P+ +L +++ G +YGR +G Sbjct: 61 NPKALAEAIAAKLAHDPDVEKVEIAGPGFINLTLKPAIWGDVLRTVLTQGADYGRGTLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G VN+E+VSANPTGPMHVGH R AV GD LASL+ F+G++ REYYINDAGAQ++ LA Sbjct: 121 GQPVNVEYVSANPTGPMHVGHTRGAVFGDALASLLDFAGFKPAREYYINDAGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S RY++AL + ++P G YPG YLK VG+ LA ++ + L E +WLP V++ ++ Sbjct: 181 SAHLRYREALGEDIGEIPAGLYPGDYLKPVGEALAKEFG-DTLRGDEAEWLPKVRERTIA 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AM+ +IRDDL +L I+H++F SE I + ID L +G +YEG L PPK K Sbjct: 240 AMLDLIRDDLASLGIKHEVFFSERSLTANGEDKIAETIDFLKAKGLIYEGRLAPPKGKLP 299 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + DR+Q LFR+T GDDVDR L KSDGSYTYFAAD+AY K K ERGF +I V+G+D Sbjct: 300 DDWE-DREQTLFRATDFGDDVDRALKKSDGSYTYFAADMAYHKTKIERGFKTLINVLGAD 358 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+KRL A A+S +AQ++V +C+LVRL+R G P+KMSKRAG F+TLR VVDEVG+ Sbjct: 359 HGGYIKRLTAAVKALSGGEAQVDVKICQLVRLFRGGEPVKMSKRAGSFVTLREVVDEVGA 418 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 VRF+ML RKN LDFDF KV EQS +NPVFYVQYA+AR S+ +A + FPD+ DL Sbjct: 419 GPVRFIMLTRKNDATLDFDFEKVLEQSNDNPVFYVQYAHARACSVLGKAHEGFPDM--DL 476 Query: 480 FPRNVIPQESEF--DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 P ++ + D +E+ + LAEYPR++E A A EP+++AFY +++A++FH W+ Sbjct: 477 SPDSLAKADFSLLVDDAEVAIARKLAEYPRLVEQAAQAHEPHRVAFYAHEIAALFHSLWA 536 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G+E P LRF+ + +TM R+ L+ A ++ S L ++GVE+ +EM Sbjct: 537 RGKELPHLRFMVPASSDITMARMALITGTALVLRSSLKLLGVEAISEM 584 >gi|220922162|ref|YP_002497463.1| arginyl-tRNA synthetase [Methylobacterium nodulans ORS 2060] gi|254782972|sp|B8I9T2|SYR_METNO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|219946768|gb|ACL57160.1| arginyl-tRNA synthetase [Methylobacterium nodulans ORS 2060] Length = 590 Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust. Identities = 292/591 (49%), Positives = 395/591 (66%), Gaps = 8/591 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FA F R+ L + ++ + + L R+V+E PRD +HG L+TNAA++L++ Sbjct: 1 MNIFAAFEERIGEALASLTRAGQLPEGLDLGRVVVEPPRDPSHGDLATNAALVLAKEART 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +AE + A ++ DP V +AG GF+NL L+P ++ + + +G +GR Sbjct: 61 NPKALAERLAAELRSDPRVTEASVAGPGFLNLRLAPQVYGDVVRAALRAGEAFGRGAKQP 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G VN+E+VSANPTGPMHVGH R AV GD LA+L+ +G EV REYYINDAGAQ++ LA Sbjct: 121 GL-VNVEYVSANPTGPMHVGHGRGAVFGDALANLLVAAGREVVREYYINDAGAQVDVLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY++AL +PEG YPG YLK VG LA + LL PE +WLP+V++ ++ Sbjct: 180 SAFLRYREALGEEIGTIPEGLYPGDYLKPVGAMLAKTHGRSLLGKPEAEWLPLVREAAIG 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPS-----PIRDIIDNLARQGYVYEGILPPP 294 AMM+ IR+DL AL I+HD+F SE G + +I+ L + VY G LPPP Sbjct: 240 AMMERIREDLAALGIRHDVFFSERTLQEGGKEGGEGGAVARLIEALRARDLVYVGRLPPP 299 Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354 K + + + DR Q LFRST GDD+DRPLLKSDGSYTYFA+D+AY K ERG +I Sbjct: 300 KGQLPEDWE-DRDQTLFRSTAFGDDIDRPLLKSDGSYTYFASDIAYHASKVERGATELID 358 Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414 V+G+DH GYVKR++A AVS+ +A ++V LC+LVRL R G P+KMSKRAG+F+TLR V+ Sbjct: 359 VLGADHGGYVKRMQAAVRAVSDGRASLDVKLCQLVRLLRGGEPVKMSKRAGEFVTLREVI 418 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 DEVG D VRFMML+RKN LDFD KV EQSK+NPVFYVQYA+AR S+FRQA++ FP Sbjct: 419 DEVGRDPVRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYAHARTASVFRQAREAFPG 478 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 D D+ E +++ +A+YPRV+E+A A EP++LAFYLY+LAS FH Sbjct: 479 EDLSAEALAGADLSLLTDSGEAEIMRLIAQYPRVVESAGSAHEPHRLAFYLYELASAFHS 538 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W+ G++ P+LRFV +R T+ RL LV A+ ++ SGL I+GV +P+EM Sbjct: 539 FWNKGKDLPQLRFVNQTDRMSTLSRLALVAALRGVLASGLGILGVTAPDEM 589 >gi|170749174|ref|YP_001755434.1| arginyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831] gi|254782974|sp|B1M335|SYR_METRJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|170655696|gb|ACB24751.1| arginyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831] Length = 583 Score = 575 bits (1481), Expect = e-162, Method: Compositional matrix adjust. Identities = 281/590 (47%), Positives = 403/590 (68%), Gaps = 13/590 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FA F +R+++ ++ + + + + L R+V+E PRD +HG L+TNAA++L++ Sbjct: 1 MNIFALFEARVRDAVEALTRAGHLPEGLDLGRVVVEPPRDASHGDLATNAALVLAKEARA 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P + E + A ++ DP + +AG GFINL L P+ ++ + + +GR + Sbjct: 61 NPKALGESLAAELRADPRIVEASVAGPGFINLRLDPAIFHAVVRDALEAPEAFGRARL-P 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +N+E+VSANPTGPMHVGH R AV GD L +L+ +G +VTREYYINDAG Q++ LA Sbjct: 120 GGPINVEYVSANPTGPMHVGHGRGAVFGDALCNLLVAAGRQVTREYYINDAGVQVDVLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY++AL + EG YPG YLK VG LA+ + LL+ PE +WLP V++ ++ Sbjct: 180 SAFQRYREAL-GEPFAIAEGLYPGDYLKPVGARLAETHGRALLDKPEAEWLPTVRETALG 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM +IR DL A+ I+HD+F SE + ++ ++ L +G VYEG LPPPK + Sbjct: 239 MMMDMIRADLAAIGIRHDVFFSERTLQ--ESGAVKALLAELRAKGLVYEGRLPPPKGQLP 296 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFR+ GDD DRPLLKSDGSYTYFA+D+AY + KY G +I V+G+D Sbjct: 297 EDWE-DREQTLFRTKEFGDDSDRPLLKSDGSYTYFASDIAYHRAKYLAGATELIDVLGAD 355 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A AVS+ KA ++V LC+LVRL R G P+KMSKRAG+F+TLR V+DEVG Sbjct: 356 HGGYVKRMQAAVKAVSDGKATLDVKLCQLVRLLRAGEPVKMSKRAGEFVTLRDVIDEVGR 415 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D++RFMML+RKN LDFD KV EQSK+NPVFYVQYA+AR RS+ RQA++ FPD D + Sbjct: 416 DAIRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYAHARVRSVQRQAREAFPDADLSV 475 Query: 480 FPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + +E++ D E++++ +A+YPRV+E+A +A EP+++AF+LY+LAS H Sbjct: 476 ---AALAREADLAVLSDPGEIEMMRLIAQYPRVLESAALAHEPHRIAFHLYELASALHSF 532 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W+ G++ P+LRFV A +RK T RL LV A+ S + +GL I+GV +P+EM Sbjct: 533 WNKGKDLPQLRFVNATDRKSTWARLALVEALRSTLAAGLAILGVTAPDEM 582 >gi|296447938|ref|ZP_06889847.1| arginyl-tRNA synthetase [Methylosinus trichosporium OB3b] gi|296254575|gb|EFH01693.1| arginyl-tRNA synthetase [Methylosinus trichosporium OB3b] Length = 592 Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust. Identities = 295/594 (49%), Positives = 402/594 (67%), Gaps = 12/594 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSR---P 56 M +F+DF + + L+ I ++ + + R V+E P+D AHG L+TN AM+ ++ P Sbjct: 1 MNIFSDFHAIIAAILERIKASGRLPETLDASRFVVEPPKDAAHGDLATNVAMVFAKEAKP 60 Query: 57 LGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116 +P +A I A + +P+V +AG GFIN+ L PS +L S++ G YGR Sbjct: 61 HFPNPRQLAVEIAAALVNEPNVAEAEVAGPGFINIRLKPSVYADVLRSVLAEGDAYGRPH 120 Query: 117 IGKGT---KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173 G+G ++N+E+VSANPTGPMHVGH R AV GD LA+L+AF+G +VTREYYINDAGAQ Sbjct: 121 -GRGALAGRINVEYVSANPTGPMHVGHGRGAVFGDALANLLAFAGADVTREYYINDAGAQ 179 Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233 ++ LA S F RY++AL ++PEG YPG YLK G+ +A + LL+ PE +WL V Sbjct: 180 VDVLARSAFLRYREAL-GETIEIPEGLYPGDYLKVAGEAIAKAHGRALLDKPEAEWLEPV 238 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR--GDPSPIRDIIDNLARQGYVYEGIL 291 K ++ AMM++IRDDL AL+I+H++F SE H S I ID L +G VY+G L Sbjct: 239 KRAAIDAMMEMIRDDLAALDIRHEVFFSERTLHAKVNGVSQIDKEIDELRARGLVYDGRL 298 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351 PPPK + + DR+Q LFRST GDD+DRPL KSDG+ TYFAAD+AY K K +RGF Sbjct: 299 PPPKGQLPDDWE-DREQTLFRSTDFGDDIDRPLKKSDGANTYFAADIAYHKSKIDRGFTT 357 Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 ++ V G+DH GYVKR+ A AA+S K +++V LC+LV+L R+G P+KMSKR+GDF+TLR Sbjct: 358 LVDVWGADHGGYVKRMAAAVAALSAGKVELDVKLCQLVKLMRNGEPVKMSKRSGDFVTLR 417 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VVDEVG D+VRFMML+RKN L+FD KV EQSK+NPVFYVQYA+AR +S RQA Sbjct: 418 EVVDEVGVDAVRFMMLYRKNDAPLEFDLAKVIEQSKDNPVFYVQYAHARAKSAVRQALAA 477 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 FPDLD +P E D E+ L +A +PR++E A A EP+++AFYL+DLASV Sbjct: 478 FPDLDVSPAALASVPLELLTDEGEIALAKAIAHFPRLVEQAAAAHEPHRVAFYLHDLASV 537 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 FH HW+ G++ P+LRFV A++R T R+ LV ++ ++ SG ++GV +P+EM Sbjct: 538 FHAHWNKGKDRPQLRFVNADDRNSTCARIALVASLTCVLASGSRLLGVSAPDEM 591 >gi|163852810|ref|YP_001640853.1| arginyl-tRNA synthetase [Methylobacterium extorquens PA1] gi|254782971|sp|A9W7L3|SYR_METEP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|163664415|gb|ABY31782.1| arginyl-tRNA synthetase [Methylobacterium extorquens PA1] Length = 585 Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust. Identities = 282/589 (47%), Positives = 404/589 (68%), Gaps = 9/589 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FA F +R++ L+ + ++ + + L R+V+E PRD +HG L+TNAA++L++ Sbjct: 1 MNIFALFETRVREALESLTRSGRLPEGLDLSRVVVEPPRDASHGDLATNAALVLAKEAKQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P + E + ++ DP + +AG GFINL L+P + ++ + + G +GR + Sbjct: 61 NPKALGEALAEELRTDPRIVEASVAGPGFINLRLAPEVFQDVIRAALSEGENFGRGQM-P 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G VNIE+VSANPTGPMHVGH R AV GD LA+L+A +G VTREYYINDAGAQ++ LA Sbjct: 120 GGPVNIEYVSANPTGPMHVGHGRGAVFGDALANLLAAAGRPVTREYYINDAGAQVDVLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++AL + +PEG YPG YLK VG LA+ + LL+ PE +WLP V+ +++ Sbjct: 180 SAYLRYREALGETIT-IPEGLYPGDYLKPVGMRLAETHGRTLLDQPEHEWLPQVRRFAID 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL A+ I+HD+F SE + + +++D L ++G VYEG LPPPK + Sbjct: 239 AMMAMIREDLAAIGIRHDVFFSEATLQGENGGKVAELLDALRQKGLVYEGRLPPPKGQLP 298 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + DR+Q LFRS+ GDDVDR LLKSDGS+TYFA+D+AY + K+ RG + +I V+G+D Sbjct: 299 DDWE-DREQTLFRSSQFGDDVDRALLKSDGSFTYFASDIAYHRDKWLRGANELIDVLGAD 357 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A AVS+ +A+++V LC+LVRL R G P+KMSKRAG+F+TLR V+DEVG Sbjct: 358 HGGYVKRMQAAVKAVSDGQARLDVKLCQLVRLLRAGEPVKMSKRAGEFVTLRDVIDEVGR 417 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D++RFMML+RKN LDFD KV EQSK+NPVFYVQY +AR S+ RQA++ P DF Sbjct: 418 DAIRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYGHARRFSVLRQAREALPGEDFS- 476 Query: 480 FPRNVIPQES---EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 P ++ D E++++ +A+YPRV+E+A A EP+++AFYLY+ AS H W Sbjct: 477 -PAALLADADLSVLTDPGEIEMMRLIAQYPRVLESAAAAHEPHRIAFYLYETASSLHSFW 535 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + G++ P+LR V +R T RL LV A+ ++ SGL ++GV +PNEM Sbjct: 536 NKGKDLPQLRIVNPTDRNSTRARLALVEALGGVLASGLAVLGVSAPNEM 584 >gi|240140137|ref|YP_002964614.1| arginyl-tRNA synthetase [Methylobacterium extorquens AM1] gi|240010111|gb|ACS41337.1| arginyl-tRNA synthetase [Methylobacterium extorquens AM1] Length = 585 Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust. Identities = 282/589 (47%), Positives = 405/589 (68%), Gaps = 9/589 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FA F +R++ L+ + ++ + + L R+V+E PRD +HG L+TNAA++L++ Sbjct: 1 MNIFALFETRVREALESLTRSGRLPEGLDLSRVVVEPPRDASHGDLATNAALVLAKEAKQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P + E++ ++ DP + +AG GFINL L+P + ++ + + G +GR + Sbjct: 61 NPKALGEVLAEELRTDPRIVEASVAGPGFINLRLAPEVFQDVIRAALSEGENFGRGHM-P 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G VNIE+VSANPTGPMHVGH R AV GD LA+L+A +G VTREYYINDAGAQ++ LA Sbjct: 120 GGPVNIEYVSANPTGPMHVGHGRGAVFGDALANLLAAAGRPVTREYYINDAGAQVDVLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++AL + +PEG YPG YLK VG LA+ + LL+ PE +WLP V+ +++ Sbjct: 180 SAYLRYREALGETIT-IPEGLYPGDYLKPVGMRLAETHGRALLDQPEHEWLPQVRRFAID 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL A+ I+HD+F SE + + +++D L ++G VYEG LPPPK + Sbjct: 239 AMMAMIREDLAAIGIRHDVFFSEATLQGENGGKVAELLDALRQKGLVYEGRLPPPKGQLP 298 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + DR+Q LFRS+ GDDVDR LLKSDGS+TYFA+D+AY + K+ RG + +I V+G+D Sbjct: 299 DDWE-DREQTLFRSSQFGDDVDRALLKSDGSFTYFASDIAYHRDKWLRGANELIDVLGAD 357 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A AVS+ +A+++V LC+LVRL R G P+KMSKRAG+F+TLR V+DEVG Sbjct: 358 HGGYVKRMQAAVKAVSDGQARLDVKLCQLVRLLRAGEPVKMSKRAGEFVTLRDVIDEVGR 417 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D++RFMML+RKN LDFD KV EQSK+NPVFYVQY +AR S+ RQA++ P DF Sbjct: 418 DAIRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYGHARRFSVLRQAREALPGEDFS- 476 Query: 480 FPRNVIPQES---EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 P ++ D E++++ +A+YPRV+E+A A EP+++AFYLY+ AS H W Sbjct: 477 -PAALLADADLSVLTDPGEIEMMRLIAQYPRVLESAAAAHEPHRIAFYLYETASSLHSFW 535 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + G++ P+LR V +R T RL LV A+ ++ SGL ++GV +PNEM Sbjct: 536 NKGKDLPQLRIVNPTDRNSTRARLALVEALGGVLASGLAVLGVSAPNEM 584 >gi|218531636|ref|YP_002422452.1| arginyl-tRNA synthetase [Methylobacterium chloromethanicum CM4] gi|254782970|sp|B7KWG7|SYR_METC4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|218523939|gb|ACK84524.1| arginyl-tRNA synthetase [Methylobacterium chloromethanicum CM4] Length = 585 Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust. Identities = 282/589 (47%), Positives = 404/589 (68%), Gaps = 9/589 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FA F +R++ L+ + ++ + + L R+V+E PRD +HG L+TNAA++L++ Sbjct: 1 MNIFALFETRVREALESLTRSGRLPEGLDLSRVVVEPPRDASHGDLATNAALVLAKEAKQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P + E + ++ DP + +AG GFINL L+P + ++ + + G +GR + Sbjct: 61 NPKALGEALAEELRTDPRIVEASVAGPGFINLRLAPEVFQDVIRAALSEGENFGRGQM-P 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G VNIE+VSANPTGPMHVGH R AV GD LA+L+A +G VTREYYINDAGAQ++ LA Sbjct: 120 GGPVNIEYVSANPTGPMHVGHGRGAVFGDALANLLAAAGRPVTREYYINDAGAQVDVLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++AL + +PEG YPG YLK VG LA+ + LL+ PE +WLP V+ +++ Sbjct: 180 SAYLRYREALGETIT-IPEGLYPGDYLKPVGMRLAETHGRALLDQPEHEWLPQVRRFAID 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL A+ I+HD+F SE + + +++D L ++G VYEG LPPPK + Sbjct: 239 AMMAMIREDLAAIGIRHDVFFSEATLQGENGGKVAELLDALRQKGLVYEGRLPPPKGQLP 298 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + DR+Q LFRS+ GDDVDR LLKSDGS+TYFA+D+AY + K+ RG + +I V+G+D Sbjct: 299 DDWE-DREQTLFRSSQFGDDVDRALLKSDGSFTYFASDIAYHRDKWLRGANELIDVLGAD 357 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A AVS+ +A+++V LC+LVRL R G P+KMSKRAG+F+TLR V+DEVG Sbjct: 358 HGGYVKRMQAAVKAVSDGQARLDVKLCQLVRLLRAGEPVKMSKRAGEFVTLRDVIDEVGR 417 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D++RFMML+RKN LDFD KV EQSK+NPVFYVQY +AR S+ RQA++ P DF Sbjct: 418 DAIRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYGHARRFSVLRQAREALPGEDFS- 476 Query: 480 FPRNVIPQES---EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 P ++ D E++++ +A+YPRV+E+A A EP+++AFYLY+ AS H W Sbjct: 477 -PAALLADADLSVLTDPGEIEMMRLIAQYPRVLESAAAAHEPHRIAFYLYETASSLHSFW 535 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + G++ P+LR V +R T RL LV A+ ++ SGL ++GV +PNEM Sbjct: 536 NKGKDLPQLRIVNPTDRNSTRARLALVEALGGVLASGLAVLGVSAPNEM 584 >gi|254562575|ref|YP_003069670.1| arginyl-tRNA synthetase [Methylobacterium extorquens DM4] gi|254269853|emb|CAX25831.1| arginyl-tRNA synthetase [Methylobacterium extorquens DM4] Length = 585 Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust. Identities = 282/589 (47%), Positives = 403/589 (68%), Gaps = 9/589 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FA F +R++ L+ + ++ + + L R+V+E PRD +HG L+TNAA++L++ Sbjct: 1 MNIFALFETRVREALESLTRSGRLPEGLDLSRVVVEPPRDASHGDLATNAALVLAKEAKQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P + E + ++ DP + +AG GFINL L+P + ++ + + G +GR + Sbjct: 61 NPKALGEALAEELRTDPRIVEASVAGPGFINLRLAPEVFQDVIRAALSEGENFGRGQM-P 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G VNIE+VSANPTGPMHVGH R AV GD LA+L+A +G VTREYYINDAGAQ++ LA Sbjct: 120 GGPVNIEYVSANPTGPMHVGHGRGAVFGDALANLLAAAGRPVTREYYINDAGAQVDVLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++AL +PEG YPG YLK VG LA+ + LL+ PE +WLP V+ +++ Sbjct: 180 SAYLRYREAL-GEAITIPEGLYPGDYLKPVGVRLAETHGRALLDRPEHEWLPQVRRFAID 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL A+ I+HD+F SE + + +++D L ++G VYEG LPPPK + Sbjct: 239 AMMAMIREDLAAIGIRHDVFFSEATLQGENGGKVAELLDALRQKGLVYEGRLPPPKGQLP 298 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + DR+Q LFRS+ GDDVDR LLKSDGS+TYFA+D+AY + K+ RG + +I V+G+D Sbjct: 299 DDWE-DREQTLFRSSQFGDDVDRALLKSDGSFTYFASDIAYHRDKWLRGANELIDVLGAD 357 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A AVS+ +A+++V LC+LVRL R G P+KMSKRAG+F+TLR V+DEVG Sbjct: 358 HGGYVKRMQAAVKAVSDGQARLDVKLCQLVRLLRAGEPVKMSKRAGEFVTLRDVIDEVGR 417 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D++RFMML+RKN LDFD KV EQSK+NPVFYVQY +AR S+ RQA++ P DF Sbjct: 418 DAIRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYGHARRFSVLRQAREALPGEDFS- 476 Query: 480 FPRNVIPQES---EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 P ++ D E++++ +A+YPRV+E+A A EP+++AFYLY+ AS H W Sbjct: 477 -PAALLADADLSVLTDPGEIEMMRLIAQYPRVLESAAAAHEPHRIAFYLYETASSLHSFW 535 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + G++ P+LR V +R T RL LV A+ ++ SGL ++GV +PNEM Sbjct: 536 NKGKDLPQLRIVNPTDRNSTRARLALVEALGGVLASGLAVLGVSAPNEM 584 >gi|217976682|ref|YP_002360829.1| arginyl-tRNA synthetase [Methylocella silvestris BL2] gi|217502058|gb|ACK49467.1| arginyl-tRNA synthetase [Methylocella silvestris BL2] Length = 598 Score = 568 bits (1465), Expect = e-160, Method: Compositional matrix adjust. Identities = 295/596 (49%), Positives = 393/596 (65%), Gaps = 18/596 (3%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M ++ADF R+ L+ I ++ ++ L+R V+E PRD +HG L+ NAAM+ ++ Sbjct: 9 MNIYADFHQRIAAILETIVASGRLPAELDLNRFVVEPPRDASHGDLAANAAMVYAKEAKA 68 Query: 60 ---DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116 +P +A I + DPDV S +AG GFIN+ L P +IL + G ++G+ Sbjct: 69 SFSNPRQLASEIAFALAEDPDVASAEVAGPGFINISLKPDVFGRILRRALELGADFGKGA 128 Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176 G KVN+E+VSANPTGPMHVGH R AV GD LA+L+ F+G +VTREYYINDAGAQ++ Sbjct: 129 AKAGGKVNVEYVSANPTGPMHVGHGRGAVFGDALANLLEFAGADVTREYYINDAGAQVDV 188 Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236 LA S RY++AL D+PEG YPG YLK VG LA ++ L+ PE +W+ + Sbjct: 189 LARSAHLRYREALGEEIGDIPEGLYPGDYLKSVGATLAARFGDSLVQRPETEWMEPARAA 248 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS-PIRDIIDNLARQGYVYEGILPPPK 295 +++ MM +IRDDL AL+I H IF SE RG+ + I L G VYEG LPPPK Sbjct: 249 AIEGMMAMIRDDLAALDITHAIFFSERSLTRGEAGDQVAAAIAALRADGLVYEGRLPPPK 308 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 + + + DR+Q LFRST GDDVDRPLLKSDG YTYFA+D+AY K K +RGF +I V Sbjct: 309 GQAAEDWE-DREQTLFRSTAFGDDVDRPLLKSDGGYTYFASDIAYHKTKIDRGFALLIDV 367 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 G+DH GYV R+ A A+S KA ++V LC+LV+L R G P+KMSKR+GDF+TLR VVD Sbjct: 368 WGADHGGYVSRMRAAVEALSRGKASLDVKLCQLVKLMRAGEPVKMSKRSGDFVTLREVVD 427 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP-- 473 EVG D+VRFMML+RKN L+FD KV EQSK+NPVFYVQYA+AR RS+ RQA P Sbjct: 428 EVGRDAVRFMMLFRKNDAPLEFDLSKVIEQSKDNPVFYVQYAHARARSVLRQAHVSIPAN 487 Query: 474 DLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 L F +E+E D EL L+ +A++PRVIE A A EP++LAFYL++LA Sbjct: 488 KLTTSAF------EEAELGLLVDPGELYLVKLVAQFPRVIEAAASAHEPHRLAFYLHELA 541 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 S HGHW+ G++ P+LRF+ LT+ RL LV +A ++++GL ++GV +P+EM Sbjct: 542 SALHGHWTRGKDQPQLRFLNEEMPNLTIARLALVKVLAGVLSAGLGVLGVSAPDEM 597 >gi|46201881|ref|ZP_00054144.2| COG0018: Arginyl-tRNA synthetase [Magnetospirillum magnetotacticum MS-1] Length = 576 Score = 565 bits (1455), Expect = e-159, Method: Compositional matrix adjust. Identities = 273/555 (49%), Positives = 385/555 (69%), Gaps = 5/555 (0%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 ++ E PR+ AHG ++TNAAM+L++ G+ P +AE I R++ P V V +AG GFIN Sbjct: 26 KVTAEPPRETAHGDVATNAAMVLTKAAGMKPRDLAEKIAERLRAHPAVTEVEVAGPGFIN 85 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 L L+ S+ + L+ ++ +G+ YG++ +GKG KVN+E+VSANPTGPMH+GH R AV GD L Sbjct: 86 LRLADSFWYERLAEVLAAGVTYGQSEMGKGHKVNVEYVSANPTGPMHIGHARGAVFGDAL 145 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ASL+ +GY+VTREYY+NDAG+Q++ LA S F RY++AL ++PEG YPG YLK G Sbjct: 146 ASLLVKAGYDVTREYYVNDAGSQVDVLARSAFLRYREALGEEIGEIPEGLYPGEYLKPAG 205 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 + LA K+ L + EE+WLP ++ ++V AM+ +I+DDL L ++HD+F+SE G Sbjct: 206 QALAKKHGPALKDKSEEEWLPELRSFAVDAMLDMIKDDLAGLGVRHDVFVSERGLVEG-- 263 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 +++ +D L QG +YEG+L PPK K + R Q LF++T GDDVDRPL KSDGS Sbjct: 264 GKVQESLDYLNSQGLIYEGVLEPPKGKLPDDWEA-RPQTLFKATGFGDDVDRPLKKSDGS 322 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 +TYFA+D+AY + KY RGF +MI V G+DH GYVKR++A AVS+ ++V LC++V Sbjct: 323 WTYFASDIAYHQDKYRRGFASMIDVWGADHGGYVKRMQAAVKAVSQGGGDLDVKLCQMVN 382 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L + G P KMSKRAG F+TLR +V+ VG D VRF+ML RKN LDFD KV EQS++NP Sbjct: 383 LLKGGQPYKMSKRAGTFVTLRDLVEAVGKDVVRFIMLTRKNDAHLDFDLDKVLEQSRDNP 442 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 VFYVQYA+ARC S+ R A ++P+ +V+ + + D +EL LI LA +PR +E Sbjct: 443 VFYVQYAHARCHSVMRHAAGMWPESVGHTPGVDVLARLT--DPAELGLIRLLAGWPRQVE 500 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A A EP+++AFYLY+LA+ FHG W+ G+++ LRF+ +R++++ RL L+ AV +I Sbjct: 501 SAAEAHEPHRVAFYLYELAAAFHGLWNKGKDDTSLRFLIEGDREVSLARLGLLRAVVGVI 560 Query: 571 NSGLNIIGVESPNEM 585 SGL I GV EM Sbjct: 561 ASGLGIFGVTPVEEM 575 >gi|83311628|ref|YP_421892.1| arginyl-tRNA synthetase [Magnetospirillum magneticum AMB-1] gi|109894999|sp|Q2W492|SYR_MAGMM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|82946469|dbj|BAE51333.1| Arginyl-tRNA synthetase [Magnetospirillum magneticum AMB-1] Length = 576 Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust. Identities = 275/557 (49%), Positives = 384/557 (68%), Gaps = 9/557 (1%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 ++ E PR+ +HG ++TNAAM+L++ G+ P +AE I ++ P V V +AG GFIN Sbjct: 26 KVTAEPPREVSHGDVATNAAMVLTKAAGMKPRDLAEKIAEVLRAHPAVTGVEVAGPGFIN 85 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 L L+ S+ + L+ ++ +G YG++ +G+G KVN+E+VSANPTGPMH+GH R AV GD L Sbjct: 86 LRLADSFWFERLAEVLAAGTAYGQSDLGRGHKVNVEYVSANPTGPMHIGHARGAVFGDAL 145 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ASL+ +GY+VTREYY+NDAG+Q++ LA S F RY++AL ++PEG YPG YLK G Sbjct: 146 ASLLVKAGYDVTREYYVNDAGSQVDVLARSAFLRYREALGEEIGEIPEGLYPGEYLKPAG 205 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG-- 268 + LA K+ L + PEE+WLP ++ ++V AM+ +I+ DL L ++HD+F+SE RG Sbjct: 206 EALAKKHGPALKDKPEEEWLPELRGFAVDAMLDMIKGDLAGLGVRHDVFVSE----RGLV 261 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 + ++D +D L +G +YEG+L PPK K + R Q LF++T GDDVDRPL KSD Sbjct: 262 EAGKVQDALDYLTAKGLIYEGVLEPPKGKLPDDWEA-RPQTLFKATEFGDDVDRPLKKSD 320 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 GS+TYFA+D+AY KY RGF MI V G+DH GYVKR++A AVSE ++V LC++ Sbjct: 321 GSWTYFASDIAYHLDKYRRGFGAMIDVWGADHGGYVKRMQAAVKAVSEGGGDLDVKLCQM 380 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V L + G P KMSKRAG F+TLR +V+ VG D VRF+ML RKN LDFD KV EQS++ Sbjct: 381 VNLLKGGQPYKMSKRAGTFVTLRDLVEAVGKDVVRFIMLTRKNDAHLDFDLDKVLEQSRD 440 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 NPVFYVQYA+ARC S+ R A ++PD + V+ + D +EL LI LA +PR+ Sbjct: 441 NPVFYVQYAHARCHSVMRHAAGMWPDAVGPVPGVEVLAHLT--DPAELGLIRLLAGWPRL 498 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 +E+A A EP+++AFYLYDLA+ FHG W+ G+++ LRF+ ++R+L++ RL L+ AV Sbjct: 499 VESAAEAHEPHRVAFYLYDLAAAFHGLWNKGKDDTSLRFLIEDDRELSLARLGLLRAVVG 558 Query: 569 IINSGLNIIGVESPNEM 585 +I SGL I GV EM Sbjct: 559 VIASGLGIFGVAPVEEM 575 >gi|188582826|ref|YP_001926271.1| arginyl-tRNA synthetase [Methylobacterium populi BJ001] gi|179346324|gb|ACB81736.1| arginyl-tRNA synthetase [Methylobacterium populi BJ001] Length = 594 Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust. Identities = 286/599 (47%), Positives = 405/599 (67%), Gaps = 20/599 (3%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FA F +R++ L+ + ++ + + L R+V+E PRD AHG L+TNAA++L++ Sbjct: 1 MNIFALFETRVREALESLTRSGRLPEGLDLSRVVVEPPRDPAHGDLATNAALVLAKDAKQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P + E + ++ DP + +AG GFINL L+P +++ + + G +GR + Sbjct: 61 NPKALGEALAEALRSDPRIVEASVAGPGFINLRLAPEVFHEVIRAALHDGEAFGRGNM-P 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G VNIE+VSANPTGPMHVGH R AV GD LA+L+A +G VTREYYINDAGAQ++ LA Sbjct: 120 GGPVNIEYVSANPTGPMHVGHGRGAVFGDALANLLAAAGRPVTREYYINDAGAQVDVLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++AL + +PEG YPG YLK VG+ L + LL PE +WLP V+ +++ Sbjct: 180 SAYLRYREALGETIT-IPEGLYPGDYLKPVGEGLKQAHGDALLGKPEHEWLPTVRRFAID 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDP---------SPIRDIIDNLARQGYVYEGI 290 AMM +IR+DL A+ I+HD+F SE G + + +++D L +G VYEG Sbjct: 239 AMMDMIREDLAAIGIRHDVFFSEATLQGGSGGQGGGQGGSNRVAELLDALRAKGLVYEGR 298 Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350 LPPPK + + + DR+Q LFRST GDDVDRPLLKSDGSYTYFA+D+AY + K+ RG Sbjct: 299 LPPPKGQLPEDWE-DREQTLFRSTQFGDDVDRPLLKSDGSYTYFASDIAYHRDKWLRGAS 357 Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 +I V+G+DH GYVKR++A AVS+ +A+++V LC+LVRL R G P+KMSKRAG+F+TL Sbjct: 358 ELIDVLGADHGGYVKRMQAAVKAVSDGEARLDVKLCQLVRLLRAGEPVKMSKRAGEFVTL 417 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R V+DEVG D++RFMML+RKN LDFD KV EQSK+NPVFYVQY +AR S+ RQA++ Sbjct: 418 RDVIDEVGRDAIRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYGHARRFSVLRQARE 477 Query: 471 IFPDLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 P DF R + ++E D E++++ +A+YPRV+E+A A EP+++AFYLY Sbjct: 478 ALPSEDFS---REGLLADAELSVLTDPGEIEMMRLIAQYPRVLESAAAAHEPHRIAFYLY 534 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + AS H W+ G++ P+LR V +R T RL LV A+ ++ SGL ++GV +P+EM Sbjct: 535 ETASSLHSFWNKGKDLPQLRIVNPTDRNSTRARLALVEALGGVLASGLAVLGVSAPDEM 593 >gi|209964346|ref|YP_002297261.1| arginyl-tRNA synthetase [Rhodospirillum centenum SW] gi|209957812|gb|ACI98448.1| arginyl-tRNA synthetase ArgS [Rhodospirillum centenum SW] Length = 584 Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust. Identities = 272/586 (46%), Positives = 389/586 (66%), Gaps = 4/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F DF +++K L+E+ + + + L R+ +E PRD +HG +STNAAM+L++P G Sbjct: 1 MNVFKDFEAKIKAALEELMADGSLPQGLDLSRVTVEPPRDPSHGDVSTNAAMVLAKPAGK 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +IAE +VAR++ DV + +AG GF+NL ++P Y + LS ++V+G+ YG + +G Sbjct: 61 PPRSIAEALVARLRSVADVTAAEVAGPGFVNLRMAPDYWCRRLSDVLVAGVTYGASTMGN 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G++VN+E+VSANPTGP+H H R AVVGD LA+L+ +G+EVTREYYINDAGAQ+ L Sbjct: 121 GSRVNVEYVSANPTGPLHAAHARGAVVGDALAALLEKAGFEVTREYYINDAGAQVEVLGR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++A+ ++ +P G YPG YLK VG+ +A + L PE +WLP+++D++V Sbjct: 181 STYLRYREAVTGEEASIPAGLYPGEYLKEVGQAIARRDGDRWLTAPEAEWLPVMRDFAVG 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 +M I++DL ++NI HD+F SE + + + L Q +Y G+L PPK K Sbjct: 241 MIMGWIKEDLASMNIHHDVFTSERALVQS--GAVDAALQTLRDQDLIYVGVLEPPKGKKP 298 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + R Q LF++T GDDVDRPL KSDGS+TYFA D+AY K RG +I V G+D Sbjct: 299 DDWE-PRPQTLFKATQFGDDVDRPLQKSDGSWTYFANDIAYHYDKARRGSPTLIDVWGAD 357 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR+EA AV+ ++V +C+LV L +G P+KMSKRAG F+TLR V++ VG Sbjct: 358 HGGYVKRMEAAVKAVTGGAGVLDVKICQLVHLLENGQPVKMSKRAGTFVTLRDVMEAVGR 417 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRF+ML R+N + L+FD+ KV EQSK+NPVFYVQYA+ARCRS+ R A++ PD D Sbjct: 418 DVVRFIMLTRRNDQTLEFDYAKVTEQSKDNPVFYVQYAHARCRSVLRHAEEAHPDWDITG 477 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + E++LI + +PR IE A A EP+++AFYLYDLAS FH W+ G Sbjct: 478 PALAGVDLARLSAPEEIELIRQMLSWPRQIEAAAEAHEPHRVAFYLYDLASAFHALWNKG 537 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++ LRF+ ++ +LT RL LV AV+ +I SGL ++GV EM Sbjct: 538 KDDATLRFLIESDPELTKARLALVKAVSIVIASGLQVMGVVPVEEM 583 >gi|300022780|ref|YP_003755391.1| arginyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888] gi|299524601|gb|ADJ23070.1| arginyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888] Length = 586 Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust. Identities = 281/588 (47%), Positives = 390/588 (66%), Gaps = 6/588 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F++ +R++ L+ + + + + L E PRD +HG ++ NAA++L++ Sbjct: 1 MNVFSEVEARVRAALEALKTEGVLPSDLALPEFDAEPPRDASHGDIAVNAALVLAKAAKK 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ + A+++ D+ + +AG GF+N+ P ++ I+ G YG Sbjct: 61 KPRDIADALKAKLEAHGDIQKIEVAGPGFLNITFKPEVWHGLVRDILSEGGRYGAGSSRG 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 K+N+E+VSANPTGPMHVGHCR AV GD LA+L+ F+GY+VTREYYINDAG Q+N LA Sbjct: 121 DGKLNVEYVSANPTGPMHVGHCRGAVFGDALANLLVFAGYDVTREYYINDAGGQVNVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY++AL + +PEG YPG YLK VG+ LA ++ L+N PEE+WLPIV+ +++ Sbjct: 181 SAFLRYREALGEDIGAIPEGLYPGDYLKPVGEALAKEHGPSLINMPEERWLPIVRSIAIE 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM +I+DDL ALNI+HD+F SE I+ I L ++G +YEG L PK Sbjct: 241 KMMAMIKDDLAALNIRHDVFFSEASLQADGKDQIKAAIAELEKKGLIYEGKLEKPKGHDD 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + DR Q LF+ST GDD DR L KSDG+YTYFA D+AY K RGF ++I V G+D Sbjct: 301 DDWE-DRVQTLFKSTDFGDDEDRALKKSDGTYTYFAGDVAYHYDKLSRGFRHLINVFGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ R++AV AA+S+K A ++V + +LVRL++ G P KMSKRAG F+TLR VVDEVG Sbjct: 360 HVGYIPRIKAVVAALSDKTADLDVKVVQLVRLFKAGEPYKMSKRAGTFVTLRDVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD--F 477 D VR+MML+RKN E LDFDF KV EQSK+NPVFYVQYA+AR S+ R A + P LD Sbjct: 420 DPVRYMMLYRKNQETLDFDFAKVTEQSKDNPVFYVQYAHARSASVLRNAVEQIPGLDVSV 479 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 D+ R + + DT E+ LI LA +PR++E A A EP+++AFYLYDLAS H W+ Sbjct: 480 DVLRRADLSLLT--DTGEIDLIKRLASFPRLVEGAASAHEPHRIAFYLYDLASALHSQWT 537 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G ++P LRF+Q+N+ T RL L+ A ++I SGL+++GVE+P+ M Sbjct: 538 RGNDSPHLRFIQSNDGVATSARLALIAATKTVIKSGLDVLGVEAPDAM 585 >gi|323137650|ref|ZP_08072726.1| arginyl-tRNA synthetase [Methylocystis sp. ATCC 49242] gi|322396947|gb|EFX99472.1| arginyl-tRNA synthetase [Methylocystis sp. ATCC 49242] Length = 593 Score = 559 bits (1440), Expect = e-157, Method: Compositional matrix adjust. Identities = 302/594 (50%), Positives = 400/594 (67%), Gaps = 11/594 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL- 59 M +F F +R+ + L+ I ++ + L R V+E P+D + G L+ NAAM+ +R Sbjct: 1 MNIFDIFHARIASILEGIKADGRLPEPDLARFVVEPPKDASLGDLACNAAMVFAREAKAH 60 Query: 60 --DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117 +P +A I + V + +AG GFIN+ L P ++L + ++ YGR Sbjct: 61 FANPRELAVEICYALAQSEGVATAEVAGPGFINIRLKPEIFAQVLRAALLDPDNYGRVEK 120 Query: 118 GKGT----KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173 G+ KVN+E+VSANPTGPMHVGH R AV GD LA+L+AFSG EVTREYYINDAGAQ Sbjct: 121 GRAGALQGKVNVEYVSANPTGPMHVGHGRGAVFGDALANLLAFSGCEVTREYYINDAGAQ 180 Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233 ++ LA S F RY++AL + +PEG YPG YLK VG+ LA + ELL+ PE +WLP+V Sbjct: 181 VDVLARSAFLRYREALGETIT-IPEGLYPGDYLKPVGEALAKAHGRELLDRPEGEWLPVV 239 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH--RGDPSPIRDIIDNLARQGYVYEGIL 291 + ++ AMM +IRDDL ALNI+H+IF SE H PS I I+ L +G VYEG L Sbjct: 240 RREAIDAMMDMIRDDLAALNIRHEIFFSERTLHDRSNGPSKIDAAIEWLREKGLVYEGRL 299 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351 PPPK + + DR+Q LFRST GDDVDR L KSDGS TYFA+D+AY K K +RGFD Sbjct: 300 PPPKGQLPDDWE-DREQTLFRSTDFGDDVDRALKKSDGSPTYFASDIAYHKDKIDRGFDT 358 Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 ++ V G+DH GYVKR+ A AA+S +K ++V LC+LV+L R+G P+KMSKRAGDF+TLR Sbjct: 359 LVDVWGADHGGYVKRMGAAVAALSGRKVALDVKLCQLVKLMRNGEPVKMSKRAGDFVTLR 418 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VVDEVG D+VRFMML+RKN LDFD KV EQSK+N VFYVQYA+AR +S+ RQA Sbjct: 419 EVVDEVGVDAVRFMMLYRKNDAPLDFDLAKVIEQSKDNAVFYVQYAHARAKSVMRQALAA 478 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 FPDLD + + E D ELQL +A+YPR IE A A EP+++AFYL++L+SV Sbjct: 479 FPDLDISMAALSGAKFEMLTDEGELQLARVIAQYPRAIEAAAAAHEPHRVAFYLHELSSV 538 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 FH HW+ G++ P+LRFV + R LT R+ LV ++ ++ SGL ++GV +P+EM Sbjct: 539 FHSHWNKGKDQPQLRFVNSTERDLTSARVALVLSLTVVLGSGLRLLGVSAPDEM 592 >gi|260433438|ref|ZP_05787409.1| arginyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157] gi|260417266|gb|EEX10525.1| arginyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157] Length = 581 Score = 551 bits (1421), Expect = e-155, Method: Compositional matrix adjust. Identities = 275/588 (46%), Positives = 398/588 (67%), Gaps = 11/588 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF+D R+ + L ++ + + + + D + +E PRD AHG ++TNAAM+L++P + Sbjct: 1 MNLFSDIRGRVLDALTQMQSEGALPEGLSFDNVAVEPPRDAAHGDMATNAAMVLAKPAKM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + A++ D + S +AG GF+NL L+PS + +L +++ G +YGR+ +G+ Sbjct: 61 KPRDIAETLAAKLAEDERITSAEVAGPGFLNLRLAPSVWQGVLGAVLEKGTDYGRSTMGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGP+HVGH R AV GD LASL+A+SG++VTREYYIND GAQ++ LA Sbjct: 121 GLKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLAYSGHDVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 S + RY++A N S ++ EG YPG YL +G+ L +KY LL+ PE +WL V++++ Sbjct: 181 SAYERYREA--NGLSPEIAEGLYPGDYLIPIGEALKEKYGDSLLDKPESEWLAEVREFAT 238 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 +AMM +IR DLKAL ++ D+F SE + I ++ L +G +Y+G+L PPK K Sbjct: 239 EAMMDLIRADLKALGVEMDVFFSEKSLY--GTGKIEAALEALNEKGLIYQGVLEPPKGKK 296 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + + R+Q LFRST GDDVDRP+ KSDGS+TYFA D+AY K RGFD +I V G+ Sbjct: 297 PEDWE-PREQTLFRSTAHGDDVDRPVKKSDGSWTYFAPDIAYHYDKVTRGFDALIDVFGA 355 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GYVKR++A +A+S+ K +++ L +LV+L+++G P KMSKRAG+F+TLR VVD+VG Sbjct: 356 DHGGYVKRMKAAVSALSDGKVPLDIKLTQLVKLWKNGEPFKMSKRAGNFVTLRDVVDQVG 415 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DF 477 D RF+ML RKN LDFDF KV EQS+ENPVFYVQYA+AR S+ R+A + D+ D Sbjct: 416 PDVTRFVMLTRKNDAPLDFDFDKVLEQSRENPVFYVQYAHARVMSVLRRAAEAGIDVSDE 475 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 L ++ + +EL + LAE+PR++E A EP+++AFYLY+LA FH W+ Sbjct: 476 TLRGADLAALDH---PAELTVARKLAEWPRLVEIAARTNEPHRIAFYLYELAGDFHALWN 532 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G + P LRF+Q + + ++ L AV+ +I++GL I+GV EM Sbjct: 533 RGNDEPALRFLQDGDVATSQSKIALARAVSVVISAGLGILGVTPAQEM 580 >gi|144899909|emb|CAM76773.1| Arginyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1] Length = 580 Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust. Identities = 282/587 (48%), Positives = 383/587 (65%), Gaps = 10/587 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M LF F + L +D ++ ++ E PR+ AHG ++TNAAM+LS+ G Sbjct: 1 MNLFKYFRQEIIAALSRLDLPSGLDTS---KVTAEPPREEAHGDVATNAAMVLSKAAGQK 57 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE + A+++ P V +V IAG GFINL L S+ + L+ ++ +G YG + +G Sbjct: 58 PRDLAEALAAQLRAHPAVAAVEIAGPGFINLRLVDSFWAERLAEVLQAGAAYGDSDMGGK 117 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 + +N+E+VSANPTGPMH+GH R AV+GD LASL+A +GY VTREYYINDAGAQ++ LA S Sbjct: 118 SPINVEYVSANPTGPMHIGHARGAVIGDALASLLAKAGYAVTREYYINDAGAQVDVLARS 177 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 + RY++AL ++PEG YPG YL+ GK LA + + N PE +WL + ++V A Sbjct: 178 IHLRYREALGEEIGEIPEGLYPGDYLQPAGKTLAAIHGDDFKNAPESEWLARFRLFAVDA 237 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRG--DPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 MM +IRDDL AL ++HD+F SE RG + + +D LA G VYEG+L PPK K Sbjct: 238 MMDMIRDDLAALGVKHDVFTSE----RGLVESGKVDAALDFLAGLGQVYEGVLEPPKGKV 293 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + R Q LFR+T GDDVDRPL KSDGS+TYFA+D+AY KY RGF MI + G+ Sbjct: 294 LDDWE-PRPQTLFRATAFGDDVDRPLKKSDGSWTYFASDIAYHLDKYRRGFPAMIDIWGA 352 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GYVKR++A AVSE ++V LC++V L + G P KMSKRAG F+TLR +VD+VG Sbjct: 353 DHGGYVKRMQAAVKAVSEGGGDLDVKLCQMVNLMKGGQPFKMSKRAGTFVTLRDLVDQVG 412 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D VRF+ML RKN LDFD KV EQS++NPVFYVQYA+ARC S+ R P D Sbjct: 413 KDVVRFIMLTRKNDAHLDFDLDKVLEQSRDNPVFYVQYAHARCHSVLRHGVQALPGADLS 472 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 P D +EL +I LA +PR++E+A A EP+++AFYL D+A+ FHG W+ Sbjct: 473 AAALAAGPLARLTDPAELAVIKLLAGWPRLVESAAEAHEPHRVAFYLNDVAAAFHGLWNK 532 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G+++ +LRF+ + +L++ R+ LV AVA +I SGL + GVE EM Sbjct: 533 GKDDTQLRFLIEGDAELSLARMGLVRAVADVIASGLAVFGVEPVEEM 579 >gi|288960182|ref|YP_003450522.1| arginyl-tRNA synthetase [Azospirillum sp. B510] gi|288912490|dbj|BAI73978.1| arginyl-tRNA synthetase [Azospirillum sp. B510] Length = 586 Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust. Identities = 273/587 (46%), Positives = 382/587 (65%), Gaps = 5/587 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F F + ++ L+E+ + + + R+ +E PR+ +HG LSTNAAMIL++P + Sbjct: 1 MNIFKAFETDIRKLLEELAAEGAIPAGLDGSRLTVEPPREASHGDLSTNAAMILAKPAKM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +AEL+VA++K DV SV IAG GF+NL L P R + ++ +G +G + +G Sbjct: 61 APRALAELLVAKLKGRADVASVEIAGPGFVNLRLMPDVWRDRIRDVLTAGTAFGDSELGG 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 T VN+E+VSANPTGP+H H R AV GD LASL+ +GY VTREYYINDAGAQ++ LA Sbjct: 121 KTPVNVEYVSANPTGPLHAAHGRGAVFGDALASLLRKAGYAVTREYYINDAGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY++AL ++P G YPG YLK VG+ LA++ + + E +WLP +++++ Sbjct: 181 STFIRYREALGEAVGEIPAGLYPGEYLKEVGQALAERDGNRWVGTDEAEWLPACREFAIA 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 +M I++DL L I D++ SE + + L +G +Y G+L PPK K Sbjct: 241 MIMGWIKEDLGVLGITMDVYSSERALVAA--GAVNTALAALEERGLIYTGVLEPPKGKKP 298 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + R Q LF+S+ GDDVDRPL KSDGS+TYFA D+AY KY RG ++I V+G+D Sbjct: 299 DDWE-PRPQTLFKSSEFGDDVDRPLKKSDGSFTYFANDIAYHYDKYRRGAASLIDVLGAD 357 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A A+S A+++V LC+LV L +DG P+KMSKRAG F+TLR V+D+VG Sbjct: 358 HGGYVKRMQAATRAISGGAAELDVKLCQLVHLMQDGQPVKMSKRAGTFVTLRDVIDQVGK 417 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRF+ML R+N + LDFDF KV EQSK+NPVFYVQYA+ARCRS+ R A P LD Sbjct: 418 DVVRFIMLTRRNDQTLDFDFAKVTEQSKDNPVFYVQYAHARCRSVLRHAATALPQLDQTP 477 Query: 480 FPRNVIPQESEFDT-SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + D E+ L +A +PR++E A A EP+++AF+LYDLAS FH W+ Sbjct: 478 ASLAASANLARLDAEEEMALAKRMATWPRIVEAAAEAHEPHRIAFFLYDLASDFHALWNR 537 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 GR++ LRF+ + +LT RL L+ AVA++I SGL ++GVE E+ Sbjct: 538 GRDDASLRFLIEGDAELTTARLALIAAVATVIASGLAVMGVEPVEEL 584 >gi|83953782|ref|ZP_00962503.1| arginyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1] gi|83841727|gb|EAP80896.1| arginyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1] Length = 580 Score = 549 bits (1414), Expect = e-154, Method: Compositional matrix adjust. Identities = 273/586 (46%), Positives = 389/586 (66%), Gaps = 8/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFAD S + + L + + + + D I +E PRD AHG ++TNAAM+L++P + Sbjct: 1 MNLFADIRSLVLSTLDTLVADGFLPEGLSFDAITVEPPRDAAHGDMATNAAMVLAKPARM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + ++ DP + + +AG GF+NL LS + + ++ +++ G ++GR +G+ Sbjct: 61 KPRDIAEKLAEKLGEDPRITAADVAGPGFLNLRLSAAVWQGVVGAVLGQGTDFGRGDLGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGP+HVGH R AV GD LASL+ F+G++VTREYYIND GAQ++ LA Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGFDVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + + PEG YPG YL VG L DK ++ E WL V++++ Sbjct: 181 SVYLRYLEA-HGQEVAFPEGTYPGDYLIDVGAALKDKVGDAYIDADESVWLEDVRNFATD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MMK+IRDDL +L ++ D+F SE + I ID+L +G +YEG+L PPK K Sbjct: 240 EMMKLIRDDLASLGVEMDVFYSEKSLY--GTGRIESAIDDLKAKGLIYEGVLEPPKGKKP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP++KSDG +TYFA D+AY K +RGFD +I V G+D Sbjct: 298 EDWE-PREQTLFKSTAHGDDVDRPVMKSDGGWTYFAPDIAYHYDKVQRGFDMLIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+SE +++ L +LV+L+++G KMSKRAG F+TLR VVD+VG Sbjct: 357 HGGYVKRMKAAVSALSEGAVPLDIKLTQLVKLFKNGKEFKMSKRAGTFVTLRDVVDQVGP 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN +LDFDF KV EQS+ENPVFYVQYA+AR S+ R+A + D D + Sbjct: 417 DVTRFVMLTRKNDAMLDFDFAKVLEQSRENPVFYVQYAHARVHSVLRKAAEAGVDTDMET 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 R + Q +EL+L LAE+PR++E A + EP+++AFYLY+LA FHG W+ G Sbjct: 477 LQRADLSQLDH--EAELKLAQKLAEWPRMVETAARSNEPHRIAFYLYELAGDFHGLWNRG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P LRF+Q ++ L+ ++ L A A +I SGL I+GV+ EM Sbjct: 535 NDVPELRFLQ-DDAALSQSKIALAQAAAIVIASGLGILGVKPAEEM 579 >gi|254486265|ref|ZP_05099470.1| arginyl-tRNA synthetase [Roseobacter sp. GAI101] gi|214043134|gb|EEB83772.1| arginyl-tRNA synthetase [Roseobacter sp. GAI101] Length = 580 Score = 542 bits (1397), Expect = e-152, Method: Compositional matrix adjust. Identities = 272/589 (46%), Positives = 389/589 (66%), Gaps = 14/589 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFAD + + + L + + + + + D I +E PRD AHG ++TNAAM+L++P GL Sbjct: 1 MNLFADIRTLVLSALDALVAEGFLPEGLNFDAIAVEPPRDAAHGDMATNAAMVLAKPAGL 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + ++ D + S +AG GF+NL L+PS + I+ +++ G ++GR +GK Sbjct: 61 KPREIAERLAVKLVDDARISSADVAGPGFLNLRLAPSVWQGIVGAVLAEGTDFGRGDLGK 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGP+HVGH R AV GD LASL+ F+G++VTREYYIND GAQ++ LA Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGWDVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + + P+G YPG YL VG+ L K ++ E WL V++++ + Sbjct: 181 SVYLRYLEA-HGQEVAFPDGTYPGDYLIGVGEALKAKVGDAYIDQDESVWLEDVRNFATE 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MMK+IRDDL +L ++ D+F SE + I I++L +G +YEG+L PPK K Sbjct: 240 EMMKLIRDDLASLGVEMDVFYSEKSLY--GTGKIEAAIEDLKSKGLIYEGVLEPPKGKLP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP++KSDG +TYFA D+AY K +RGFD +I V G+D Sbjct: 298 EDWE-PREQTLFKSTAHGDDVDRPVMKSDGGWTYFAPDIAYHYDKVQRGFDMLIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S +++ L +LV+L++DG KMSKRAG F+TLR VVD+VGS Sbjct: 357 HGGYVKRMKAAVSALSGGTVPLDIKLTQLVKLFKDGKEFKMSKRAGTFVTLRDVVDQVGS 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN +LDFDF KV EQS+ENPVFYVQYA+AR S+ R+A + D Sbjct: 417 DVTRFVMLTRKNDAMLDFDFAKVLEQSRENPVFYVQYAHARVNSVLRKAAEAGVATDLAA 476 Query: 480 FPR---NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 ++ E +EL+L LAE+PR++E A + EP+++AFYLY+LA FHG W Sbjct: 477 LQAADLGLLDHE-----AELKLAAKLAEWPRLVETAARSNEPHRVAFYLYELAGDFHGLW 531 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + G + P LRF+Q ++ ++ ++ L A A +I SGL I+GV EM Sbjct: 532 NRGNDVPSLRFLQ-DDAAVSQAKIALAKATAIVIASGLGILGVTPAEEM 579 >gi|126729733|ref|ZP_01745546.1| Arginyl-tRNA synthetase, class I [Sagittula stellata E-37] gi|126709852|gb|EBA08905.1| Arginyl-tRNA synthetase, class I [Sagittula stellata E-37] Length = 580 Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust. Identities = 280/587 (47%), Positives = 386/587 (65%), Gaps = 10/587 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFAD + + + + + + + + D + E PRD AHG ++TNAAM+L++P G Sbjct: 1 MNLFADIRALVLDAITTLVTEGVLPDGLNTDAVTTEPPRDPAHGDMATNAAMVLAKPAGK 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + ++ DP V S +AG GF+NL L PS + + +I+ G YGR+ +GK Sbjct: 61 KPRDIAEALAVKLADDPRVASAEVAGPGFLNLRLEPSVWQALPKAILGGGTAYGRSDMGK 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVNIE+VSANPTGPMHVGH R A+VGD +ASL+A++GY+VTREYYIND GAQ++ LA Sbjct: 121 GEKVNIEYVSANPTGPMHVGHARGAIVGDAMASLLAYAGYDVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RYQ+A ++ D PEG YPG YL VG+ L DK L PE+ WLP V++++ Sbjct: 181 SVYLRYQEA-HDLSVDWPEGSYPGDYLIPVGEALKDKVGDVWLEAPEKVWLPEVREFATA 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IRDDL AL + D+F SE + I ID L G +Y G+LP PK K Sbjct: 240 AMMALIRDDLAALGVHMDVFFSEKSLY--GTGRIEAAIDALKEMGLIYWGVLPKPKGKAE 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + +R+Q LF+ST GDD DRP++K+DGS+ YFA D+AY K +RGFD +I + G+D Sbjct: 298 EDWE-EREQWLFKSTDFGDDEDRPVMKADGSWAYFAPDIAYHYDKVQRGFDLLINIFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRL+AV A+S+ + +++ L +LV+L+++G P KMSKRAG FITLR +VDEVG+ Sbjct: 357 HGGYVKRLKAVVKALSQDRVPLDIKLIQLVKLFKNGAPFKMSKRAGTFITLRDLVDEVGA 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFD 478 D RF ML RK+ LDFDF KV EQSKENPVFYVQYA+AR S+ R+A D+ D Sbjct: 417 DVARFHMLTRKSDATLDFDFDKVVEQSKENPVFYVQYAHARICSVLRKAGAEGIDVSDAT 476 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L +++ +EL L LAE+PR++E A EP+++A YL +LA+ HG W+ Sbjct: 477 LAAQDL---SGMTHPAELHLAAKLAEWPRLVEIAARTHEPHRVATYLGELAADLHGLWNR 533 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G + P LRF+Q ++ T ++ L A A +I++GL I+GV EM Sbjct: 534 GNDEPALRFLQ-DDPVATQSKIALARATAVVISAGLGILGVTPVEEM 579 >gi|154253462|ref|YP_001414286.1| arginyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1] gi|171769666|sp|A7HXJ6|SYR_PARL1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|154157412|gb|ABS64629.1| arginyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1] Length = 583 Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust. Identities = 278/595 (46%), Positives = 382/595 (64%), Gaps = 23/595 (3%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F F R++ L+ ++ + + + L R+ +E PRD +HG LSTNAAM+L++P G+ Sbjct: 1 MNIFRFFEGRVEAALRSLEEEGVLPSGLDLTRVAVEPPRDPSHGDLSTNAAMVLAKPAGM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +AE + ++ + V V +AG GFINL L+P++ + + I+ SG YG + +G Sbjct: 61 KPRELAEQLAVKLGGEEAVTEVDVAGPGFINLRLNPAFWQARIPEILRSGPAYGASDVGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G VN+E+VSANPTGPMHVGH R AV GD L +L+ GY V REYYINDAG QI LA Sbjct: 121 GEAVNVEYVSANPTGPMHVGHVRGAVFGDALCNLLEKVGYRVCREYYINDAGGQIEVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY++AL + +PEG YPG YLK VG+ L + LL E + L IV++ +V+ Sbjct: 181 SAFLRYREALGEDIGQIPEGLYPGGYLKPVGQALVAAHGRSLLEKDEPEALSIVREAAVE 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM++IR DL L I H+ F SE HR + + L +G +Y G L PPK + Sbjct: 241 AMMELIRGDLGVLGIVHETFFSELALHRS--GFVEQTLKVLEDKGLIYIGELEPPKGEVP 298 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + R Q LFRST GDD DR L KSDGS+TYFA D+AY KY RG+ +I V G+D Sbjct: 299 DDWEA-RPQTLFRSTEFGDDTDRALKKSDGSWTYFAPDIAYHLDKYNRGYRTLIDVWGAD 357 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 HSGY+KR+ A A V++ A+ +V +C+LVRL+R+G P+KMSKR+GDF+TLR VVDEVG Sbjct: 358 HSGYIKRMRAAIAGVTDGNAEFDVKICQLVRLFRNGEPVKMSKRSGDFVTLREVVDEVGK 417 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD--------- 470 D VRFMML RKN LDFDF KV EQS++NPVFYVQYA AR S+ R + Sbjct: 418 DVVRFMMLTRKNDAPLDFDFAKVMEQSRDNPVFYVQYANARIHSVLRNVAEEGTYDLSDG 477 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 + DF L D +E+ L+ +A +PR++E A +A EP+++AFYL DLA+ Sbjct: 478 ALANADFTLLT----------DEAEMALVRLMAGFPRLVEQAALAHEPHRIAFYLDDLAA 527 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 FHG W+ G+++ LRF++A++R +T+ RL L+ + A +I +GL I+GVE EM Sbjct: 528 AFHGLWNKGKDDHSLRFIRADHRDVTLARLALIRSAAYVIAAGLAILGVEPTEEM 582 >gi|163735841|ref|ZP_02143270.1| arginyl-tRNA synthetase [Roseobacter litoralis Och 149] gi|161390927|gb|EDQ15267.1| arginyl-tRNA synthetase [Roseobacter litoralis Och 149] Length = 580 Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust. Identities = 265/555 (47%), Positives = 378/555 (68%), Gaps = 9/555 (1%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + +E PRD +HG ++TNAAM+L++P G P IAE + A + DP + S +AG GF+NL Sbjct: 33 VTVEPPRDASHGDMATNAAMVLAKPAGKKPREIAEALAACLVADPRITSAEVAGPGFLNL 92 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 ++P R +L S++ +G ++GR +G G KVN+E+VSANPTGP+HVGH R AV GD LA Sbjct: 93 RIAPDAWRAVLLSVLGAGTDFGRATLGAGQKVNVEYVSANPTGPLHVGHTRGAVFGDALA 152 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 SL+ ++G++VTREYYIND GAQ++ LA SV+ RY +A + + P+G YPG YL VG+ Sbjct: 153 SLLDYAGFDVTREYYINDGGAQVDVLARSVYLRYLEA-HGQEVAFPDGTYPGDYLIPVGQ 211 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 +L D + PEE WL ++ ++ AMM +IR DLK+L ++ D+F SE + Sbjct: 212 QLKDLKGDSYVGQPEEAWLQDIRTFATDAMMDLIRADLKSLGVEMDVFYSEKSLY--GTG 269 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 I I++L +G +Y+G+L PPK K + + R+Q LF+ST GDDVDRP++KSDGS+ Sbjct: 270 RIEAAIEDLKSKGLIYDGVLEPPKGKKPEDWE-PREQTLFKSTEHGDDVDRPVMKSDGSW 328 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 TYFA D+AY K RG+D +I V G+DH GYVKR++A +A+S+ K +++ L +LV+L Sbjct: 329 TYFAPDIAYHYDKVSRGYDALIDVFGADHGGYVKRMKAAVSALSDGKVPLDIKLTQLVKL 388 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 +++G P KMSKRAG F+TLR VVD+VG D RF+ML RKN +LDFDF KV EQS+ENPV Sbjct: 389 FKNGEPFKMSKRAGTFVTLRDVVDQVGPDVARFVMLTRKNDAMLDFDFDKVMEQSRENPV 448 Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIE 510 FYVQYA+AR S+ R+A+ +D D + S D +EL LI L+E+PR++E Sbjct: 449 FYVQYAHARVASVMRKAEAAGIAVDMDTLKAADL---SLLDHEAELGLIAKLSEWPRLVE 505 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A + EP+++AFYLY+L+ VFH W+ G + P LRFVQ ++ K+T ++ L A + +I Sbjct: 506 TAARSNEPHRVAFYLYELSGVFHALWNRGNDVPELRFVQ-DDPKVTQAKIALARACSVVI 564 Query: 571 NSGLNIIGVESPNEM 585 +GL I+GV EM Sbjct: 565 AAGLGILGVTPAQEM 579 >gi|254510090|ref|ZP_05122157.1| arginyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11] gi|221533801|gb|EEE36789.1| arginyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11] Length = 581 Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust. Identities = 267/591 (45%), Positives = 392/591 (66%), Gaps = 17/591 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF++ + + L ++ + + + D + +E PRD AHG ++TNAAM+L++P + Sbjct: 1 MNLFSEIRGLVLDALAQMQSDGALPEGLSFDNVAVEPPRDAAHGDMATNAAMVLAKPAKM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ + ++ D + S +AG GF+NL L+PS + +L++++ G +YGR+ +G+ Sbjct: 61 KPRDIADALAGKLAADDRITSAEVAGPGFLNLRLAPSVWQGVLTAVLAQGTDYGRSTMGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGP+HVGH R AV GD LASL+A+SG++VTREYYIND GAQ++ LA Sbjct: 121 GQKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLAYSGHDVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 S + RY++A N S ++ EG YPG YL +G+ L KY L++ PE +WL +++++ Sbjct: 181 SAYERYREA--NGLSPEIAEGLYPGDYLIPIGEALKAKYGDSLIDKPESEWLEDLRNFAT 238 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 AMM +IR DLKAL ++ D+F SE + I + +L +G +YEG+L PPK K Sbjct: 239 DAMMDLIRADLKALGVEMDVFFSEKSLY--GTGRIEAALQSLTDKGLIYEGVLEPPKGKK 296 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + + R+Q LF+ST GDDVDRP+ KSDG++TYFA D+AY K RGFD +I V G+ Sbjct: 297 PEDWE-PREQTLFKSTEHGDDVDRPVKKSDGAWTYFAPDIAYHYDKVSRGFDALIDVFGA 355 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GYVKR++A +A+S+ K +++ L +LV+L+++G P KMSKRAG+F+TLR VVD+VG Sbjct: 356 DHGGYVKRMKAAVSALSDGKVSLDIKLTQLVKLWKNGEPFKMSKRAGNFVTLRDVVDQVG 415 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D RF+ML RKN LDFDF KV EQS+ENPVFYVQYA+AR S+ R+A + D Sbjct: 416 PDVTRFVMLTRKNDAPLDFDFDKVLEQSRENPVFYVQYAHARVMSVLRRAAEAGIAAD-- 473 Query: 479 LFPRNVIPQESEFDT----SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 + ++ T SEL + LAE+PR++E A EP+++AFYLY+LA FH Sbjct: 474 ----DATLAGADLGTIDHASELTVAKKLAEWPRLVEIAARTNEPHRVAFYLYELAGDFHA 529 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W+ G E +LRF+Q + + ++ L +V+ +I++GL I+GV EM Sbjct: 530 LWNKGNEETQLRFIQDGDVATSQSKIALARSVSVVISAGLGILGVTPAQEM 580 >gi|332558380|ref|ZP_08412702.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides WS8N] gi|332276092|gb|EGJ21407.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides WS8N] Length = 580 Score = 536 bits (1381), Expect = e-150, Method: Compositional matrix adjust. Identities = 269/561 (47%), Positives = 378/561 (67%), Gaps = 15/561 (2%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 L + +E PRD AHG +STNAAM+L++P G P TIAE + R+ DP + S +AG GF Sbjct: 30 LSAVAVEPPRDPAHGDMSTNAAMVLAKPSGKPPRTIAEALATRLAADPRISSAEVAGPGF 89 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 +NL L P+ + ++++I+ +G YGR+ IG G KVN+EFVSANPTGPMHVGH R AVVGD Sbjct: 90 LNLRLRPAVWQGMVATILQAGDTYGRSTIGAGQKVNVEFVSANPTGPMHVGHVRGAVVGD 149 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 LA L+A++G+ VTREYYIND GAQ++ LA S F RY++A + + ++ EG YPG YL Sbjct: 150 ALARLLAYAGWNVTREYYINDGGAQVDVLARSAFERYREA-HGLEPEIREGLYPGDYLIP 208 Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 VG+ L KY LL+ E+ WL V++++ + MM++IR+DL AL ++ D++ SE + Sbjct: 209 VGEALKAKYGDSLLDKGEQHWLTEVREFATEMMMQMIREDLAALGVEMDVYSSEKALY-- 266 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 I +D L +YEG+L PPK KT + + R+Q LFRST GDDVDRP+ KSD Sbjct: 267 GTGKIEAALDRLKEMDLIYEGVLEPPKGKTPEDWE-PREQTLFRSTAHGDDVDRPVKKSD 325 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 GS+TYFA D+AY K RGFD +I + G+DH GYVKR++A AA+S + +++ L +L Sbjct: 326 GSWTYFAPDIAYHYDKVTRGFDQLIDIFGADHGGYVKRMKAAVAALSAGRVPLDIKLIQL 385 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V+L+++G P KMSKRAG ++TLR VV++VG+D RF+ML RKN LDFDF KV EQSKE Sbjct: 386 VKLWKNGEPFKMSKRAGTYVTLRDVVEQVGTDVTRFVMLTRKNDATLDFDFDKVLEQSKE 445 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD----TSELQLIVHLAE 504 NPVFYVQYA AR S+ R+A++ D+ + ++ D +E+ LI LAE Sbjct: 446 NPVFYVQYANARINSVLRKAREQGMDVS------DATLATADLDRLDHPAEIALIAKLAE 499 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 +PR++E A EP+++AFYL++LAS HG W+ G + LRF+Q ++ ++ ++ L Sbjct: 500 WPRLVEIAARTNEPHRVAFYLHELASELHGLWNRGNDEAGLRFLQ-DDPVVSQAKIALAR 558 Query: 565 AVASIINSGLNIIGVESPNEM 585 AV +I +GL I+GV EM Sbjct: 559 AVGVVICAGLGILGVTPVEEM 579 >gi|294083991|ref|YP_003550748.1| arginyl-tRNa synthetase [Candidatus Puniceispirillum marinum IMCC1322] gi|292663563|gb|ADE38664.1| Arginyl-tRNA synthetase [Candidatus Puniceispirillum marinum IMCC1322] Length = 572 Score = 536 bits (1381), Expect = e-150, Method: Compositional matrix adjust. Identities = 267/586 (45%), Positives = 387/586 (66%), Gaps = 15/586 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F F ++ + ++ + K++ + R+V E PRD HG L+TNAAM+L++ + Sbjct: 1 MNIFTYFETQFAALITQLGASGHITKELDISRVVFELPRDPDHGDLATNAAMVLAKSAAM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +A L+ +K VD+V IAG GFINL ++P + +S I+ +G +YGRN G+ Sbjct: 61 KPRELAVLLSEELKKIDGVDAVEIAGPGFINLQINPLLWAREISDILTAGYDYGRNNAGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G VNIE+VSANPTGP+H H R AV+GD LA LMAFSG++VT+EYY+NDAG Q++ LA Sbjct: 121 GANVNIEYVSANPTGPLHAAHARGAVIGDALAGLMAFSGWQVTKEYYVNDAGGQVDILAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +AL + ++ G YPG YLK VG +LA KY + PE +WL + +SV Sbjct: 181 SVYLRYCEAL-GDTIEIEAGLYPGAYLKDVGTKLAAKYGDKFHKRPEAEWLSTFRLFSVS 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 +M+ I+DDL+AL IQ D F SE + + ++ ID L G+VY G+L PPK K Sbjct: 240 DIMEGIKDDLQALGIQMDRFSSERELV--ESGAVQKAIDKLKANGHVYTGVLQPPKGKEP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+QLLFRST GDD DRPL KS+GS+TYFA+D++Y K ER +I ++G D Sbjct: 298 EDWE-PREQLLFRSTEFGDDTDRPLQKSNGSWTYFASDVSYHFDKLERTKGPLIDILGVD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+KR+ A A+S +K +++ C+LV L +G P+KMSKRAG+F+T+R V+D VGS Sbjct: 357 HGGYLKRMTAAVEAISGQKNMLDIRFCQLVNLMENGKPVKMSKRAGNFVTVRDVIDAVGS 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D +RF+ML R+N + LDFD+ KV EQS++NPVFYVQYA+AR S+ RQ + + D + Sbjct: 417 DVIRFIMLTRRNDQTLDFDYAKVTEQSRDNPVFYVQYAHARACSVLRQIGKVPHEADLSV 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 D +EL ++ LA +P+++E+A A E +++AF+L DLAS FH W+ G Sbjct: 477 LK----------DPAELAVLKMLASWPKLVESAARAHEAHRIAFFLVDLASSFHSLWNAG 526 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 RENP LRF+ +N+ +T RLQLV A + +I +GLN++ +++ +EM Sbjct: 527 RENPELRFILDDNQTITAARLQLVKATSLVIATGLNVLSIKALDEM 572 >gi|77463500|ref|YP_353004.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1] gi|109895030|sp|Q3J281|SYR_RHOS4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|77387918|gb|ABA79103.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1] Length = 583 Score = 536 bits (1381), Expect = e-150, Method: Compositional matrix adjust. Identities = 269/561 (47%), Positives = 378/561 (67%), Gaps = 15/561 (2%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 L + +E PRD AHG +STNAAM+L++P G P TIAE + R+ DP + S +AG GF Sbjct: 33 LSAVAVEPPRDPAHGDMSTNAAMVLAKPSGKPPRTIAEALATRLAADPRISSAEVAGPGF 92 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 +NL L P+ + ++++I+ +G YGR+ IG G KVN+EFVSANPTGPMHVGH R AVVGD Sbjct: 93 LNLRLRPAVWQGMVATILQAGDTYGRSTIGAGQKVNVEFVSANPTGPMHVGHVRGAVVGD 152 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 LA L+A++G+ VTREYYIND GAQ++ LA S F RY++A + + ++ EG YPG YL Sbjct: 153 ALARLLAYAGWNVTREYYINDGGAQVDVLARSAFERYREA-HGLEPEIREGLYPGDYLIP 211 Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 VG+ L KY LL+ E+ WL V++++ + MM++IR+DL AL ++ D++ SE + Sbjct: 212 VGEALKAKYGDSLLDKGEQHWLTEVREFATEMMMQMIREDLAALGVEMDVYSSEKALY-- 269 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 I +D L +YEG+L PPK KT + + R+Q LFRST GDDVDRP+ KSD Sbjct: 270 GTGKIEAALDRLKEMDLIYEGVLEPPKGKTPEDWE-PREQTLFRSTAHGDDVDRPVKKSD 328 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 GS+TYFA D+AY K RGFD +I + G+DH GYVKR++A AA+S + +++ L +L Sbjct: 329 GSWTYFAPDIAYHYDKVTRGFDQLIDIFGADHGGYVKRMKAAVAALSAGRVPLDIKLIQL 388 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V+L+++G P KMSKRAG ++TLR VV++VG+D RF+ML RKN LDFDF KV EQSKE Sbjct: 389 VKLWKNGEPFKMSKRAGTYVTLRDVVEQVGTDVTRFVMLTRKNDATLDFDFDKVLEQSKE 448 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD----TSELQLIVHLAE 504 NPVFYVQYA AR S+ R+A++ D+ + ++ D +E+ LI LAE Sbjct: 449 NPVFYVQYANARINSVLRKAREQGMDVS------DATLATADLDRLDHPAEIALIAKLAE 502 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 +PR++E A EP+++AFYL++LAS HG W+ G + LRF+Q ++ ++ ++ L Sbjct: 503 WPRLVEIAARTNEPHRVAFYLHELASELHGLWNRGNDEAGLRFLQ-DDPVVSQAKIALAR 561 Query: 565 AVASIINSGLNIIGVESPNEM 585 AV +I +GL I+GV EM Sbjct: 562 AVGVVICAGLGILGVTPVEEM 582 >gi|310816694|ref|YP_003964658.1| arginyl-tRNA synthetase [Ketogulonicigenium vulgare Y25] gi|308755429|gb|ADO43358.1| arginyl-tRNA synthetase [Ketogulonicigenium vulgare Y25] Length = 580 Score = 535 bits (1379), Expect = e-150, Method: Compositional matrix adjust. Identities = 267/557 (47%), Positives = 379/557 (68%), Gaps = 9/557 (1%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 D + +E PRD HG ++TNAAM+L++P G+ P IA+ + A++ +DP V S +AG GF+ Sbjct: 31 DNVAVEPPRDAGHGDMATNAAMVLAKPAGVQPRVIADALAAKLVLDPRVASAEVAGPGFL 90 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 NL LS + ++ + V+S +GR+ +G G +VN+E+VSANPTGPMHVGH R AV GD Sbjct: 91 NLRLSADIWQGVVKA-VLSDAGFGRSTLGAGKRVNVEYVSANPTGPMHVGHTRGAVFGDA 149 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 LASL+A++GY+VTREYYIND GAQ++ LA S + RY++A + D+ EG YPG YL V Sbjct: 150 LASLLAYAGYDVTREYYINDGGAQVDVLARSAYERYREA-HGQQPDIREGLYPGDYLIEV 208 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 G+ L +KY LL+ E+ WL +++++ MM++IR DL LN++ D+F SE + Sbjct: 209 GQALKEKYGDTLLDKGEQYWLAEIREFATLQMMEMIRGDLAMLNVKMDVFSSEKALY--G 266 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 I I L QG +YEG+L PPK K + + R+Q LFRST+ GDDVDRP+ KSDG Sbjct: 267 TGKIEAAIAKLEEQGLIYEGVLEPPKGKLPEDWE-PREQTLFRSTLHGDDVDRPIKKSDG 325 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 +TYFA D+AY K +RGFD +I V G+DH GYVKR++A +A+S +++ L +LV Sbjct: 326 QWTYFAPDIAYHYDKVQRGFDLLIDVFGADHGGYVKRMKAAVSALSGGTVPLDIKLIQLV 385 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 +L+++G P KMSKRAG F+TLR VV++ G+D RF+ML RKN LDFDF KV EQSK+N Sbjct: 386 KLFKNGEPFKMSKRAGTFVTLRDVVEQAGADVTRFVMLTRKNDAPLDFDFDKVLEQSKDN 445 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 PVFYVQYA+AR S+ R+A+ D+ D L ++ E +EL+++ LAE+PR+ Sbjct: 446 PVFYVQYAHARVHSVLRRAQAAGLDVSDAALIGADLTRVGHE---AELKVMRQLAEWPRL 502 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 IE A EP+++AFYLY+LAS FHG W+ G ++ LRF+Q + + + ++ L+ AVA Sbjct: 503 IEIAARGNEPHRIAFYLYELASDFHGLWNRGNDDTALRFLQEGDAETSQAKIALIRAVAV 562 Query: 569 IINSGLNIIGVESPNEM 585 +I+ GL I+GV EM Sbjct: 563 VISEGLGILGVTPVEEM 579 >gi|126462356|ref|YP_001043470.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029] gi|166232830|sp|A3PK32|SYR_RHOS1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|126104020|gb|ABN76698.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029] Length = 580 Score = 535 bits (1378), Expect = e-150, Method: Compositional matrix adjust. Identities = 268/561 (47%), Positives = 377/561 (67%), Gaps = 15/561 (2%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 L + +E PRD AHG +STNAAM+L++P G P IAE + R+ DP + S +AG GF Sbjct: 30 LSAVAVEPPRDPAHGDMSTNAAMVLAKPSGKPPRAIAEALATRLAADPRISSAEVAGPGF 89 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 +NL L P+ + ++++I+ +G YGR+ IG G KVN+EFVSANPTGPMHVGH R AVVGD Sbjct: 90 LNLRLRPAVWQGMVATILQAGDTYGRSTIGAGQKVNVEFVSANPTGPMHVGHVRGAVVGD 149 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 LA L+A++G+ VTREYYIND GAQ++ LA S F RY++A + + ++ EG YPG YL Sbjct: 150 ALARLLAYAGWNVTREYYINDGGAQVDVLARSAFERYREA-HGLEPEIREGLYPGDYLIP 208 Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 VG+ L KY LL+ E+ WL V++++ + MM++IR+DL AL ++ D++ SE + Sbjct: 209 VGEALKAKYGDSLLDKGEQHWLKEVREFATEMMMQMIREDLAALGVEMDVYSSEKALY-- 266 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 I +D L +YEG+L PPK KT + + R+Q LFRST GDDVDRP+ KSD Sbjct: 267 GTGKIEAALDRLKEMDLIYEGVLEPPKGKTPEDWE-PREQTLFRSTAHGDDVDRPVKKSD 325 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 GS+TYFA D+AY K RGFD +I + G+DH GYVKR++A AA+S + +++ L +L Sbjct: 326 GSWTYFAPDIAYHYDKVTRGFDQLIDIFGADHGGYVKRMKAAVAALSAGRVPLDIKLIQL 385 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V+L+++G P KMSKRAG ++TLR VV++VG+D RF+ML RKN LDFDF KV EQSKE Sbjct: 386 VKLWKNGEPFKMSKRAGTYVTLRDVVEQVGTDVTRFVMLTRKNDATLDFDFDKVLEQSKE 445 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD----TSELQLIVHLAE 504 NPVFYVQYA AR S+ R+A++ D+ + ++ D +E+ LI LAE Sbjct: 446 NPVFYVQYANARINSVLRKAREQGMDVS------DATLATADLDRLDHPAEIALIAKLAE 499 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 +PR++E A EP+++AFYL++LAS HG W+ G + LRF+Q ++ ++ ++ L Sbjct: 500 WPRLVEIAARTNEPHRVAFYLHELASELHGLWNRGNDEAGLRFLQ-DDPVVSQAKIALAR 558 Query: 565 AVASIINSGLNIIGVESPNEM 585 AV +I +GL I+GV EM Sbjct: 559 AVGVVICAGLGILGVTPVEEM 579 >gi|221639361|ref|YP_002525623.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides KD131] gi|254782980|sp|B9KSX6|SYR_RHOSK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|221160142|gb|ACM01122.1| Arginyl-tRNA synthetase [Rhodobacter sphaeroides KD131] Length = 580 Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust. Identities = 268/561 (47%), Positives = 376/561 (67%), Gaps = 15/561 (2%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 L + +E PRD AHG +STNAAM+L++P G P IAE + R+ DP + S +AG GF Sbjct: 30 LSAVAVEPPRDPAHGDMSTNAAMVLAKPSGKPPRAIAEALATRLAADPRISSAEVAGPGF 89 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 +NL L P+ + ++++I+ +G YGR+ IG G KVN+EFVSANPTGPMHVGH R AVVGD Sbjct: 90 LNLRLRPAVWQGMVATILKAGDTYGRSTIGAGQKVNVEFVSANPTGPMHVGHVRGAVVGD 149 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 LA L+A++G+ VTREYYIND GAQ++ LA S F RY++A + + ++ EG YPG YL Sbjct: 150 ALARLLAYAGWNVTREYYINDGGAQVDVLARSAFERYREA-HGLEPEIREGLYPGDYLIP 208 Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 VG+ L KY LL+ E+ WL V++++ + MM++IR+DL AL ++ D++ SE + Sbjct: 209 VGEALKAKYGDSLLDKGEQHWLTEVREFATEMMMQMIREDLAALGVEMDVYSSEKALY-- 266 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 I +D L +YEG+L PPK KT + + R+Q LFRST GDDVDRP+ KSD Sbjct: 267 GTGKIEAALDRLKEMDLIYEGVLEPPKGKTPEDWE-PREQTLFRSTAHGDDVDRPVKKSD 325 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 GS+TYFA D+AY K RGFD +I + G+DH GYVKR++A AA+S + +++ L +L Sbjct: 326 GSWTYFAPDIAYHYDKVTRGFDQLIDIFGADHGGYVKRMKAAVAALSAGRVPLDIKLIQL 385 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V+L+++G P KMSKRAG ++TLR VV++VG+D RF+ML RKN LDFDF KV EQSKE Sbjct: 386 VKLWKNGEPFKMSKRAGTYVTLRDVVEQVGTDVTRFVMLTRKNDATLDFDFDKVLEQSKE 445 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD----TSELQLIVHLAE 504 NPVFYVQYA AR S+ R+A++ D+ + ++ D +E+ LI LAE Sbjct: 446 NPVFYVQYANARINSVLRKAREQGMDVS------DATLATADLDRLDHPAEIALIAKLAE 499 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 +PR++E A EP+++AFYL++LAS HG W+ G + LRF+Q + ++ ++ L Sbjct: 500 WPRLVEIAARTNEPHRVAFYLHELASELHGLWNRGNDEAGLRFLQ-EDPVVSQAKIALAR 558 Query: 565 AVASIINSGLNIIGVESPNEM 585 AV +I +GL I+GV EM Sbjct: 559 AVGVVICAGLGILGVTPVEEM 579 >gi|84516347|ref|ZP_01003707.1| arginyl-tRNA synthetase [Loktanella vestfoldensis SKA53] gi|84510043|gb|EAQ06500.1| arginyl-tRNA synthetase [Loktanella vestfoldensis SKA53] Length = 598 Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust. Identities = 276/586 (47%), Positives = 385/586 (65%), Gaps = 8/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFAD R+ L ++ + + + LD + +E PRD AHG ++TNAAM+L++P GL Sbjct: 19 MNLFADVRGRVLACLDQMVADGALPQGLALDAVAVEPPRDAAHGDMATNAAMVLAKPAGL 78 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P IA+ + ++ DP + S +AG GF+N++L P+ + I+ S +S +GR+ +G+ Sbjct: 79 NPRAIADALAVKLAADPLIASADVAGPGFLNMHLVPAAWQGIVKS-ALSDKGFGRSRLGQ 137 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G ++ +E+VSANPTGP+HVGH R AV GD LASL+ ++GY+VTREYYIND GAQ++ LA Sbjct: 138 GQRMLVEYVSANPTGPLHVGHTRGAVFGDALASLLDYAGYDVTREYYINDGGAQVDVLAR 197 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A ++ D PEG YPG YL VG+ L +K SE L+ E+ WL V+ ++ Sbjct: 198 SVYLRYVEA-HDLTVDWPEGSYPGDYLIPVGEALKEKVGSEYLDQSEDVWLDDVRLFATD 256 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL L I+ D F SE + I I L +G +Y+G+L PK KT Sbjct: 257 AMMALIRADLAQLGIEMDSFYSEKSLY--GSGLIEKAIAELDAKGLIYQGVLEAPKGKTP 314 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP+ KSDG++TYFA D+AY K +RGFD +I V G+D Sbjct: 315 EDWE-PREQTLFKSTAHGDDVDRPVQKSDGAWTYFAPDIAYHYDKVQRGFDALIDVFGAD 373 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A AA+S+ K +++ L +LV+LY++G P KMSKRAG FITLR VVDEVG Sbjct: 374 HGGYVKRMKAAVAALSDGKVPLDIKLTQLVKLYQNGAPFKMSKRAGTFITLRDVVDEVGP 433 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF ML RKN LDFDF KV EQSK+NPVFYVQYA+AR S+ R+A+D +D Sbjct: 434 DVTRFHMLTRKNDAPLDFDFAKVLEQSKDNPVFYVQYAHARVNSVLRKAQDAGVAVDDAT 493 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + +EL + +AE+PR++E A EP+++AFYLYDLAS FH W+ G Sbjct: 494 LA--AVDLSGLTHEAELAVARKIAEWPRLVEIAAKGHEPHRIAFYLYDLASDFHALWNRG 551 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ LRF+Q + T ++ L+ AVA +I+ GL I+GV EM Sbjct: 552 NDDASLRFLQMGDSDTTQAKIALIRAVAIVISHGLGILGVTPAEEM 597 >gi|260575254|ref|ZP_05843254.1| arginyl-tRNA synthetase [Rhodobacter sp. SW2] gi|259022514|gb|EEW25810.1| arginyl-tRNA synthetase [Rhodobacter sp. SW2] Length = 580 Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust. Identities = 273/587 (46%), Positives = 382/587 (65%), Gaps = 10/587 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF+D S + + + ++ + + L + +E PRD HG ++TNAAM+L++P GL Sbjct: 1 MNLFSDIRSLVIASIDAMVAAGELPQGLDLAAVAVEPPRDAGHGDMATNAAMVLAKPAGL 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + AR+ DP + V +AG GF+NL L P+ + ++ +++ G +YGR +G Sbjct: 61 APRAIAESLAARLARDPRIAGVEVAGPGFLNLRLQPAVWQGLVGAVLRQGADYGRATLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+EFVSANPTGPMHVGH R AVVGD LA L+AF+G+ VTREYYIND G Q++ LA Sbjct: 121 GRRVNVEFVSANPTGPMHVGHVRGAVVGDALARLLAFAGWNVTREYYINDGGGQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++A ++ EG YPG YL VG+ L KY + LL PE WL ++ +S Sbjct: 181 SAYERYREAC-GLSPEIREGLYPGDYLIPVGEALKAKYGTSLLEQPESVWLADLRTFSTD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM +IR DL AL + D++ SE + I I+ L G +YEG L PPK K Sbjct: 240 MMMTMIRADLAALGVTMDVYSSEKALY--GTGRIEAAIETLRGMGLIYEGTLEPPKGKEP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R Q LFRST GDDVDRP++KSDGS+TYFA D+AY K +RGFD +I + G+D Sbjct: 298 EDWE-PRLQTLFRSTAHGDDVDRPVMKSDGSWTYFAPDIAYHYDKVQRGFDELIDIFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S + +++ L +LV+L+++G P KMSKRAG F+TLR V+D VG+ Sbjct: 357 HGGYVKRMKAAVSALSNGRVPLDIKLVQLVKLWKNGEPFKMSKRAGTFVTLRDVIDLVGA 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFD 478 D RF+ML RKN LDFDF KV EQSK+NPVFYVQYA AR S+ R+A++ + D Sbjct: 417 DVTRFVMLTRKNDAALDFDFDKVLEQSKDNPVFYVQYANARINSVLRRAREAGVAVDDAT 476 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L ++ + E +E+ L +AE+PRV+E A EP+++AFYLY+LAS HG W+ Sbjct: 477 LAAADLGKLDHE---AEIGLAKKIAEWPRVVEIAARGNEPHRVAFYLYELASDLHGLWNR 533 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G + P+LRFVQ ++ +T ++ L A +I+SGL I+GV EM Sbjct: 534 GNDAPQLRFVQ-DDSAITQAKIALARATGVVISSGLAILGVTPVEEM 579 >gi|294676411|ref|YP_003577026.1| arginyl-tRNA synthetase [Rhodobacter capsulatus SB 1003] gi|294475231|gb|ADE84619.1| arginyl-tRNA synthetase [Rhodobacter capsulatus SB 1003] Length = 581 Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust. Identities = 266/586 (45%), Positives = 384/586 (65%), Gaps = 7/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFAD + + L + + + + + +E PRD AHG ++TNAAM+L++P G Sbjct: 1 MNLFADVRAVVLAALDAMVAEGALPAGLDTQAVAVEPPRDAAHGDMATNAAMVLAKPAGT 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +AE +VA++ D + S +AG GFINL L+P ++ + + +G ++GR+ +G+ Sbjct: 61 NPRALAEGLVAKLAADARIVSAEVAGPGFINLRLAPGLWADVVRAALTAGSDFGRSTLGR 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGH R AV GD LASL+ F+GY+VTREYYIND GAQ++ LA Sbjct: 121 GIKVNVEYVSANPTGPMHVGHTRGAVFGDALASLLDFAGYDVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++A + ++ EG YPG YL VG+ L +KY + L++ PE WL V+ ++ + Sbjct: 181 SAYERYREA-NGLEPEIREGLYPGDYLIPVGEALKEKYGASLIDKPESDWLAEVRVFATE 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL L ++ D+F SE + I + L G +YEG+L PPK K Sbjct: 240 AMMAMIREDLALLGVKMDVFYSEKSLY--GTGQIEAALQRLQDLGLIYEGVLEPPKGKLP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + +R+Q LFRST GDDVDRP+ KSDG++TYFA D+AY K ERGFD +I V G+D Sbjct: 298 EDWE-EREQTLFRSTSYGDDVDRPVKKSDGAWTYFAPDIAYHWTKIERGFDQLIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A AA+SE + +++ L +LV+L+++G P KMSKRAG F+TLR VV++ G+ Sbjct: 357 HGGYVKRMKAAVAALSENRVPLDIKLIQLVKLFKNGEPFKMSKRAGTFVTLRDVVEQAGA 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 RF ML RKN LDFDF KV EQSK+NPVFYVQYA+AR S+ R+A D+ D+ Sbjct: 417 GVTRFHMLTRKNDAPLDFDFDKVLEQSKDNPVFYVQYAHARVASVLRKAVDLGIDVTDAA 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + + +E L +AE+PR +E A A EP+++AF+LY++AS H W+ G Sbjct: 477 LAAADLDRNTH--EAERALAKKIAEWPRQVEIAARANEPHRVAFFLYEIASDLHALWNRG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P LRF+Q + + ++ L A A +I++GL I+GV EM Sbjct: 535 NDEPSLRFLQEGDLAASSAKIALARASAVVISAGLGILGVTPAEEM 580 >gi|85703270|ref|ZP_01034374.1| arginyl-tRNA synthetase [Roseovarius sp. 217] gi|85672198|gb|EAQ27055.1| arginyl-tRNA synthetase [Roseovarius sp. 217] Length = 581 Score = 532 bits (1370), Expect = e-149, Method: Compositional matrix adjust. Identities = 266/586 (45%), Positives = 380/586 (64%), Gaps = 7/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF D + + L + ++ + + L + +E PRD AHG ++TNAAM+L++P GL Sbjct: 1 MNLFTDMRALVVETLAAMQTGGQLPEGLDLANVTVEPPRDAAHGDMATNAAMVLAKPAGL 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + AR+ DP ++ V +AG GF+NL LSP + + + + G+ +GR+ +G+ Sbjct: 61 KPREIAEALAARLGDDPRIEHVEVAGPGFLNLQLSPLLWQNVARAALQQGVTFGRSTMGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+EFVSANPTGP+HVGH R AV GD LASL+ F GYEVTREYYIND GAQ++ LA Sbjct: 121 GRRVNVEFVSANPTGPLHVGHTRGAVFGDALASLLDFVGYEVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + +G YPG YL VG+ L + + PE+ WL ++D++ Sbjct: 181 SVYLRYLEA-HGQAVAFADGTYPGDYLIEVGEALKAEVGDVYVGQPEDVWLEPIRDFATD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM +IR+DL AL ++ D+F SE + I I++L +G +Y G+L PPK K Sbjct: 240 RMMALIREDLAALGVEMDVFYSEKSLY--GTGLIEAAIEDLRSKGLIYRGVLEPPKGKMP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP++KSDG +TYFA D+AY K RGFD +I V G+D Sbjct: 298 EDWE-PREQTLFKSTEHGDDVDRPIMKSDGGWTYFAPDIAYHYDKISRGFDLLIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S + +++ LC+LV+L+++G P KMSKRAG F+TLR VVD+VG+ Sbjct: 357 HGGYVKRMKAAVSALSNGRVPVDIKLCQLVKLFKNGEPFKMSKRAGTFVTLRDVVDQVGA 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN LDFDF KV EQSK+NPVFYVQYA AR S+ R+A + +D Sbjct: 417 DVTRFVMLTRKNDAPLDFDFDKVLEQSKDNPVFYVQYANARVNSVLRKAAEAGMAVDDAT 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + + +EL + +AE+PR++E A EP+++AFYLYDLAS H W+ G Sbjct: 477 LAQADLSGLTH--EAELNVARKIAEWPRLVEIAGRTNEPHRVAFYLYDLASDLHALWNRG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ LRF+Q + + ++ L AV +I++GL I+GV EM Sbjct: 535 NDDASLRFIQEGDVATSQAKIALARAVTVVISAGLGILGVTPAEEM 580 >gi|163746495|ref|ZP_02153853.1| arginyl-tRNA synthetase [Oceanibulbus indolifex HEL-45] gi|161380380|gb|EDQ04791.1| arginyl-tRNA synthetase [Oceanibulbus indolifex HEL-45] Length = 581 Score = 532 bits (1370), Expect = e-149, Method: Compositional matrix adjust. Identities = 272/586 (46%), Positives = 389/586 (66%), Gaps = 7/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFA+ + L+++ + + + D I E PRD AHG ++TNAAM+L++P GL Sbjct: 1 MNLFAEIRHLIIATLEQMVAQDALPATLNFDPITAEPPRDPAHGDMATNAAMVLAKPAGL 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + A+++ DP + S +AG GFINL L+PS + + ++ G ++GR ++G Sbjct: 61 KPRDIAEALAAQLQNDPRITSAEVAGPGFINLRLAPSVWQNVARQVLSQGTDFGRAILGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGP+HVGH R AV GD LASL+ F+GY+VTREYYIND GAQ++ LA Sbjct: 121 GQRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGYDVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + P+G YPG YL +G+ L+ Y +L++ PE +WL +++++ Sbjct: 181 SVYLRYLEA-NGKEVAFPDGTYPGDYLIPLGQALSKMYGDKLVDQPESEWLDDIREFASD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL +L ++ D+F SE + I I +L +G +YEG+L PPK K Sbjct: 240 AMMNLIREDLASLGVEMDVFYSEKSLY--GTGQIEAAIASLEAKGLIYEGVLEPPKGKKP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP+ KSDGS+TYFA D+AY K R FD +I V G+D Sbjct: 298 EDWE-PREQTLFKSTKHGDDVDRPVKKSDGSWTYFAPDIAYHYDKVSRDFDMLIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ +++ L +LV+LY++G P KMSKRAG F+TLR VVD+VG Sbjct: 357 HGGYVKRMKAAVSALSDGHVPLDIKLTQLVKLYKNGEPFKMSKRAGTFVTLRDVVDQVGP 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN +LDFDF KV EQS+ENPVFYVQYA+AR SI R+A++ + D Sbjct: 417 DVTRFVMLTRKNDAMLDFDFDKVLEQSRENPVFYVQYAHARVASILRKAQEAGVKV-ADA 475 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 R+ + + D +EL L+ LAE+PR++E A + EP+++AFYLY+LAS FH + G Sbjct: 476 TLRDADLTKLDHD-AELGLLRKLAEWPRLVETAARSNEPHRVAFYLYELASDFHSLYHLG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R LR +Q + + ++ L AVA +I +GL I+GV EM Sbjct: 535 RSEDGLRALQEGDAATSQAKIALSRAVAIVIAAGLGILGVTPAQEM 580 >gi|148556836|ref|YP_001264418.1| arginyl-tRNA synthetase [Sphingomonas wittichii RW1] gi|148502026|gb|ABQ70280.1| arginyl-tRNA synthetase [Sphingomonas wittichii RW1] Length = 576 Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust. Identities = 270/589 (45%), Positives = 375/589 (63%), Gaps = 23/589 (3%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDR--IVIERPRDCAHGHLSTNAAMILSRPLGLD 60 L+A F+ R+ L ++ + LDR + +E PRD AHG L+TNAAM+L++P G + Sbjct: 4 LYASFADRIGAILDDLQASGALPAG-LDRRNVAVEPPRDPAHGDLATNAAMVLAKPAGTN 62 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AELIV ++ P++ S +AG GFIN+ L+ R L+ I+ SG +YGR G+G Sbjct: 63 PRALAELIVPKLAALPEIASAEVAGPGFINVRLTEQSWRDELAGILSSGGDYGRTATGRG 122 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 T+VN+E+VSANPTGPMH+GHCR AVVGD LA+L+ F+GY VTREYY+NDAGAQ+ TLA S Sbjct: 123 TRVNVEYVSANPTGPMHMGHCRGAVVGDALAALLEFAGYAVTREYYVNDAGAQVQTLARS 182 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 RY++AL ++PEG+YPG YL +G+ LA ++ + PE WL + ++ +V A Sbjct: 183 AHLRYREAL-GETIEIPEGFYPGDYLIPIGQALAAEFGDAYVGKPESAWLDLFREKTVAA 241 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM +IR DL L I+H++F SE + + +D L +G VYEG L PPK + Sbjct: 242 MMDMIRADLALLGIEHEVFASEAAVQKAGKVDV--ALDRLRGEGLVYEGTLEPPKGELPD 299 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + + LF++T GDD DRP+ KSDG TYF DLAY K E D +I + G+DH Sbjct: 300 DWE-PTEMTLFKATAFGDDSDRPVRKSDGGLTYFGTDLAYHAQKAETA-DMLIDIWGADH 357 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 +G VKR++A A++ K +V L ++VRL R G P+KMSKR+G F+TL VV EVG D Sbjct: 358 AGTVKRIKAAVQALTGGKVAFDVKLVQMVRLLRGGEPVKMSKRSGSFVTLADVVREVGKD 417 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLD 476 VRF ML RK +DFDF KV E SK+NPVFYVQYA+AR RS+ R+A D+ P D Sbjct: 418 VVRFTMLTRKADAQMDFDFAKVVEASKDNPVFYVQYAHARGRSLHRRAAEAGIDLAPAAD 477 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 L D EL L+ A++PR++E A A EP+++AFYLYDLA++FH W Sbjct: 478 LSL-----------LDAEELALVKLAAQFPRIVEGAAQAHEPHRIAFYLYDLAAMFHALW 526 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + G ++P RF+ ++ ++T RL L A+ II +GL ++GV + EM Sbjct: 527 NRGNDDPARRFLLSDKPEITRARLALSDAIGQIIRNGLGVMGVTAAEEM 575 >gi|163793124|ref|ZP_02187100.1| Arginyl-tRNA synthetase [alpha proteobacterium BAL199] gi|159181770|gb|EDP66282.1| Arginyl-tRNA synthetase [alpha proteobacterium BAL199] Length = 585 Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust. Identities = 262/586 (44%), Positives = 381/586 (65%), Gaps = 4/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F F +++ L+++ + + DR+ +E PRD +HG +STNAAM+L++P+G Sbjct: 1 MNVFNQFREKIQAALEDLARRQGWPDGLPFDRVTVEPPRDLSHGDISTNAAMLLAKPVGT 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P IA + + P+V+S +AG GFINL L+ S +++I+ G YG + G+ Sbjct: 61 NPRAIAAPLAEALARLPEVESAEVAGPGFINLRLAASVWLAEVAAILSEGTAYGSSTTGE 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGP+H H R AV GD LA+L+ +G+ VTREYYINDAGAQ+ TLA Sbjct: 121 GRRVNVEYVSANPTGPLHAAHARGAVFGDALAALLKKAGFTVTREYYINDAGAQVETLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S RY++AL + +PEG+YPG YLK VG+ +A+ + PE +WL + + +V+ Sbjct: 181 STHLRYREALGEDIGAIPEGHYPGEYLKDVGQAIAESDGDRWVGKPESEWLEVFRARAVE 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM ++ DL A+ IQ D F SE + ++ D L +G VY G+L PPK KT Sbjct: 241 LMMTEVKRDLLAMGIQFDTFSSERALV--EAGAVQRAFDTLDGRGLVYTGVLEPPKGKTP 298 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + R QLLF+++ GDDVDRPL KSDGS+TYFA D+AY K+ RG +I V+G+D Sbjct: 299 DDWE-PRPQLLFKASEFGDDVDRPLKKSDGSWTYFANDIAYHLDKFLRGSPELIDVLGAD 357 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A A+S + ++V LC+LV L+ G P++MSKRAG F+TLR V+D VGS Sbjct: 358 HGGYVKRMKAAVTAISGGEGSLDVKLCQLVHLFDGGKPVRMSKRAGTFVTLRDVIDSVGS 417 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 DSVRF+ML R+N + L+FD+ KV+EQS++NPVFYVQYA+AR S+ R A + P D Sbjct: 418 DSVRFIMLTRRNDQTLEFDYQKVQEQSRDNPVFYVQYAHARATSVIRHAGEALPGHDLSD 477 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + S D EL LI LA +PR++E+A A EP+++AFYL ++A+ FH W+ G Sbjct: 478 AALAKVSLGSLTDPDELGLIRLLAGWPRLVESAADAHEPHRVAFYLGEVAAAFHSLWNKG 537 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ LRF+ ++ T+ R+ LV A A++I SGL ++GV+ E+ Sbjct: 538 KDEAHLRFILPDDTATTLARMALVRATATVIASGLGVMGVQPVEEL 583 >gi|110680351|ref|YP_683358.1| arginyl-tRNA synthetase [Roseobacter denitrificans OCh 114] gi|123361735|sp|Q164C1|SYR_ROSDO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|109456467|gb|ABG32672.1| arginyl-tRNA synthetase [Roseobacter denitrificans OCh 114] Length = 580 Score = 528 bits (1361), Expect = e-148, Method: Compositional matrix adjust. Identities = 264/557 (47%), Positives = 377/557 (67%), Gaps = 7/557 (1%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 + + +E PRD AHG ++TNAAM+L++P G P IAE + + D + S +AG GF Sbjct: 30 MTNVTVEPPRDAAHGDMATNAAMVLAKPAGKKPRDIAEALAQLLAADARIASAEVAGPGF 89 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 +NL ++P+ R +L S++ G ++GR IG G KVN+E+VSANPTGP+HVGH R AV GD Sbjct: 90 LNLRIAPTAWRAVLLSVLDKGTDFGRADIGAGQKVNVEYVSANPTGPLHVGHTRGAVFGD 149 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 LASL+ ++G++VTREYYIND GAQ++ LA SV+ RY +A + + P+G YPG YL Sbjct: 150 ALASLLDYAGFDVTREYYINDGGAQVDVLARSVYLRYLEA-HGQEVAFPDGTYPGDYLIP 208 Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 VG++L D + PEE WL ++ ++ AMM +IR DLK+L ++ D+F SE + Sbjct: 209 VGQQLKDLKGDSYVGQPEEAWLQDIRTFATDAMMDLIRADLKSLGVEMDVFYSEKSLY-- 266 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 I I++L +G +Y+G+L PPK K + + R+Q LF+ST GDDVDRP++KSD Sbjct: 267 GTGRIEAAIEDLKSKGLIYDGVLEPPKGKKPEDWE-PREQTLFKSTEHGDDVDRPVMKSD 325 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 GS+TYFA D+AY K RG+D +I V G+DH GYVKR++A +A+S+ K +++ L +L Sbjct: 326 GSWTYFAPDIAYHYDKVSRGYDALIDVFGADHGGYVKRMKAAVSALSDGKVPLDIKLTQL 385 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V+L+++G P KMSKRAG F+TLR VVD+VG D RF+ML RKN +LDFDF KV EQS+E Sbjct: 386 VKLFKNGEPFKMSKRAGTFVTLRDVVDQVGPDVARFVMLTRKNDAMLDFDFDKVMEQSRE 445 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 NPVFYVQYA+AR S+ R+A+ +D D + + +EL LI L+E+PR+ Sbjct: 446 NPVFYVQYAHARVASVMRKAEAAGIAVDMDTLKAADLSLLNH--EAELGLIAKLSEWPRL 503 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 +E A + EP+++AFYLY+L+ VFHG W+ G + P LRFVQ ++ K+T ++ L A + Sbjct: 504 VETAARSNEPHRVAFYLYELSGVFHGLWNRGNDVPELRFVQ-DDPKVTQAKIALARACSV 562 Query: 569 IINSGLNIIGVESPNEM 585 +I +GL I+GV EM Sbjct: 563 VIAAGLGILGVTPAQEM 579 >gi|84500943|ref|ZP_00999178.1| arginyl-tRNA synthetase [Oceanicola batsensis HTCC2597] gi|84391010|gb|EAQ03428.1| arginyl-tRNA synthetase [Oceanicola batsensis HTCC2597] Length = 581 Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust. Identities = 271/586 (46%), Positives = 378/586 (64%), Gaps = 7/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFAD + + + L + + + + + +E PRD HG ++TNAAM+L++P GL Sbjct: 1 MNLFADIRATVLDSLAAMQQEGDLPGGLDFANVTVEPPRDPGHGDMATNAAMVLAKPAGL 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + R+ D + S +AG GF+NL L P+ I+ +++ SG +YGR+ +G+ Sbjct: 61 KPRDIAEALADRLAADDRITSAEVAGPGFLNLRLDPAVWADIVRTVLQSGPQYGRSAMGR 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGP+HVGH R AV GD LASL+ ++GYEVTREYYIND GAQ++ LA Sbjct: 121 GLKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDYAGYEVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + ++ G YPG YL VG+ L K ++ PEE WL V++ + + Sbjct: 181 SVYLRYLEA-HGHEVTFEGGTYPGDYLISVGEALKSKVGDAYVDQPEEVWLDDVREMATE 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM++IR DL L +Q D F SE + I ID+L+ +G +Y+G L PPK K Sbjct: 240 AMMELIRVDLGLLGVQMDHFFSEKALY--GTGRIEAAIDSLSDKGLIYQGTLEPPKGKVP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LFRST GDDVDRP+ KSDGS+TYFA D+AY K RG+D +I V G+D Sbjct: 298 EDWE-PREQTLFRSTEHGDDVDRPIRKSDGSWTYFAPDIAYHYDKISRGYDLLIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ + +++ LC+LV+L++DG P KMSKRAG FITLR VV+EVG Sbjct: 357 HGGYVKRMKAAVSALSDGRVPVDIKLCQLVKLFKDGEPFKMSKRAGTFITLRDVVEEVGP 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN LDFDF KV EQS+ENPVFYVQYA+AR S+ R+A + + D Sbjct: 417 DVTRFVMLTRKNDAPLDFDFDKVLEQSRENPVFYVQYAHARIASVLRKAGEA--GIAHDD 474 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 D +E + L E+PR++E A EP+++AFYLY+LA H W+ G Sbjct: 475 ATLAAADLSGMTDEAEQSVAKKLTEWPRLVEIAARTNEPHRVAFYLYELAGDLHTLWNRG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P LRF+ + L+ +L L AVA +I++GL I+GV E+ Sbjct: 535 NDKPELRFLHEGDAALSQSKLALARAVAVVISAGLAILGVTPAEEL 580 >gi|149914960|ref|ZP_01903489.1| arginyl-tRNA synthetase [Roseobacter sp. AzwK-3b] gi|149811148|gb|EDM70985.1| arginyl-tRNA synthetase [Roseobacter sp. AzwK-3b] Length = 581 Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust. Identities = 273/587 (46%), Positives = 379/587 (64%), Gaps = 9/587 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF + + L + + K+ + + + +E PRD AHG ++TNAAM+L++P GL Sbjct: 1 MNLFTEIHGLVLAELGRLQAEGKLPEALDFANVAVEPPRDPAHGDMATNAAMVLAKPAGL 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + AR+ D ++S +AG GF+NL LS ++ + + G +GR+ +G Sbjct: 61 QPRAIAEDLAARLLEDDRIESADVAGPGFLNLRLSSGMWHAVVRAALQDGEAFGRSAMGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGP+HVGH R AV GD LASL+ + GYEVTREYYIND GAQ++ LA Sbjct: 121 GKKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDYVGYEVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + +G YPG YL VG+ L + + ++ PE+ WL V+ ++ Sbjct: 181 SVYLRYLEA-HGQAVAFEDGTYPGDYLIEVGEALKAEVGAAYVDQPEDVWLAEVRSFATD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM +IRDDLK+L ++ D+F SE + I + +L +G +YEG+L PPK KT Sbjct: 240 RMMDLIRDDLKSLGVEMDVFFSEKSLY--GTGLIEKALKSLEDRGLIYEGVLEPPKGKTP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LFRST GDDVDRP+ KSDGS+TYFA D+AY K RGFD +I V G+D Sbjct: 298 EDWE-PREQTLFRSTDYGDDVDRPVKKSDGSWTYFAPDIAYHYDKITRGFDKLIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A A+S+ + +++ LC+LV+LY++G P KMSKRAG F+TLR VVD+VG Sbjct: 357 HGGYVKRMKAAVGALSDNRVPLDIKLCQLVKLYKNGEPFKMSKRAGTFVTLRDVVDQVGP 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFD 478 D RF+ML RKN LDFDF KV EQSK+NPVFYVQYA AR S+ R+A++ D+ D Sbjct: 417 DVTRFVMLTRKNDAPLDFDFDKVLEQSKDNPVFYVQYANARVNSVLRKAREAGIDVEDAT 476 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L ++ E EL + LAE+PR+ E A EP+++AFYLYDLAS H W+ Sbjct: 477 LAKADLSGLVHEV---ELAVARKLAEWPRMAELAGRTHEPHRVAFYLYDLASDLHALWNR 533 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G + P LRF+Q +N + ++ L +V +I+SGL I+GV EM Sbjct: 534 GNDEPALRFLQEDNPATSQAKIALARSVTVVISSGLGILGVTPAEEM 580 >gi|83952167|ref|ZP_00960899.1| arginyl-tRNA synthetase [Roseovarius nubinhibens ISM] gi|83837173|gb|EAP76470.1| arginyl-tRNA synthetase [Roseovarius nubinhibens ISM] Length = 581 Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust. Identities = 263/560 (46%), Positives = 370/560 (66%), Gaps = 12/560 (2%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 L + +E PRD HG ++TNAAM+L++P GL P IAE + AR+ DP + S +AG GF Sbjct: 30 LSNVAVEPPRDPLHGDMATNAAMVLAKPAGLKPRDIAEDLAARLADDPRIASAEVAGPGF 89 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 +NL L+P ++L +++ +G ++GR+ +G+G KVN+E+VSANPTGP+HVGH R AV GD Sbjct: 90 LNLRLAPGQWHEVLRAVLAAGPDFGRSTMGQGRKVNVEYVSANPTGPLHVGHTRGAVFGD 149 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 LASL+ F+G+EVTREYYIND GAQ++ LA SV+ RY +A + + +G YPG YL Sbjct: 150 ALASLLDFTGHEVTREYYINDGGAQVDVLARSVYLRYLEA-HGQEVAFEDGTYPGDYLIP 208 Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 VG+ L + + PEE WL V++++ + MM +IR+DLK+L ++ D F SE + Sbjct: 209 VGEALKSEVGDAYVGQPEEVWLEKVREFATEKMMGLIREDLKSLGVEMDEFYSEKSLY-- 266 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 I + L +G +YEG+L PPK K + + R+Q LF+ST GDDVDRP+ KSD Sbjct: 267 GTGRIEAALAELESKGLIYEGVLEPPKGKKPEDWE-PREQTLFKSTEHGDDVDRPVKKSD 325 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 G++TYFA D+AY K RGFD +I V G+DH GYVKR++A +A+S+ + +++ LC+L Sbjct: 326 GAWTYFAPDIAYHYDKVSRGFDALIDVFGADHGGYVKRMKAAVSALSDGRVPLDIKLCQL 385 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V+LY++G P KMSKRAG F+TLR VVD VG+D RF ML RKN LDFDF KV EQSK+ Sbjct: 386 VKLYKNGEPFKMSKRAGTFVTLRDVVDMVGADVTRFHMLTRKNDAPLDFDFDKVVEQSKD 445 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR---NVIPQESEFDTSELQLIVHLAEY 505 NPVFYVQYA AR S+ R+A + D + +++ E +EL L +AE+ Sbjct: 446 NPVFYVQYANARVSSVLRKAAEAGIAADDATLAKADLSILSHE-----AELTLARKIAEW 500 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 PR++E A EP+++AFYLYDLAS H W+ G + P LRF+Q + + ++ L A Sbjct: 501 PRLVEIAGRTNEPHRVAFYLYDLASDLHALWNRGHDEPGLRFLQEGDAATSQAKIALARA 560 Query: 566 VASIINSGLNIIGVESPNEM 585 +I++GL I+GV EM Sbjct: 561 ATVVISAGLGILGVTPVEEM 580 >gi|159044277|ref|YP_001533071.1| arginyl-tRNA synthetase [Dinoroseobacter shibae DFL 12] gi|157912037|gb|ABV93470.1| arginyl-tRNA synthetase [Dinoroseobacter shibae DFL 12] Length = 581 Score = 526 bits (1354), Expect = e-147, Method: Compositional matrix adjust. Identities = 266/587 (45%), Positives = 382/587 (65%), Gaps = 9/587 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF D + + L E+ + + + + + +E PRD AHG ++TNAAM+L++P + Sbjct: 1 MNLFTDIRAGVLAALTEMQAEGTLPEGLDFANVTVEPPRDAAHGDMATNAAMVLAKPAKM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + ++ DP V S +AG GF+NL L+P+ + ++ +++ +G +GR+ +G+ Sbjct: 61 KPRDIAEALAGKLAADPRVASAEVAGPGFLNLRLAPTLWQDVVRAVLTTGTGFGRSSMGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGP+HVGH R AV GD LASL+ F+GY+VTREYYIND GAQ++ LA Sbjct: 121 GRRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGYDVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + +G YPG YL VG+ L DK ++ E+ WL V+D++ Sbjct: 181 SVYLRYLEA-HGQQVAFEDGTYPGDYLIAVGEALKDKVGDAFVDKGEQFWLAEVRDFATD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL +L ++ D F SE + I I +L +G +Y G L PPK K Sbjct: 240 AMMDLIRADLASLGVKMDRFFSEKSLY--GTGRIEAAIADLDAKGLIYRGTLEPPKGKVP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LFRST GDDVDRP+ KSDGS+TYFA D+AY K RG+D +I V G+D Sbjct: 298 EDWE-PREQTLFRSTAHGDDVDRPIKKSDGSWTYFAPDIAYHYDKVNRGYDALIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ K +++ L +LVRL+++G P KMSKRAG F+TL VV++VG Sbjct: 357 HGGYVKRMKAAVSALSDGKTPLDIKLTQLVRLFKNGEPFKMSKRAGTFVTLSDVVEQVGP 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI-FPDLDFD 478 D RF+ML RKN LDFDF KV EQS+ENPVFYVQYA+AR S+ R+A + P D + Sbjct: 417 DVTRFVMLTRKNDAPLDFDFDKVLEQSRENPVFYVQYAHARVCSVLRKAAEAGVPVDDAN 476 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L ++ D +EL+L LAE+PR++E A EP++++F LYD+A+ H W+ Sbjct: 477 LAQADL---SGMTDPAELKLARALAEWPRLVEIAARTNEPHRISFALYDIAADLHALWNK 533 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G ++P LRF+Q + T ++ LV A A +I++GL I+GV EM Sbjct: 534 GNDDPSLRFLQEGDSAATQAKIALVRACAVVISTGLGILGVSPVEEM 580 >gi|114771796|ref|ZP_01449189.1| arginyl-tRNA synthetase [alpha proteobacterium HTCC2255] gi|114547612|gb|EAU50503.1| arginyl-tRNA synthetase [alpha proteobacterium HTCC2255] Length = 576 Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust. Identities = 269/586 (45%), Positives = 381/586 (65%), Gaps = 12/586 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF+D + + L+ + + K++ + +E PRD +HG +STNAAM+L++P G+ Sbjct: 1 MNLFSDIRNLVLASLEILQSNGTLPKELNFSNVTVEPPRDASHGDMSTNAAMVLAKPAGM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P IA+ + + D V S +AG GF+NL L Y I+ ++ G YGR IG Sbjct: 61 NPRLIADALSLLLVNDERVISADVAGPGFLNLCLKQDYWTSIIPFVLNMGTNYGRATIGT 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGP+HVGH R AV GD LASL+ F+G++VTREYYIND GAQ++ LA Sbjct: 121 GIKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGFDVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + +G YPG YL +G +L +KY L++ PE +W+ ++ ++ + Sbjct: 181 SVYLRYLEA-NGQAVEFVDGTYPGDYLVELGVDLKNKYGDSLVDKPETEWIAELRLFATE 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM +IR DL L I+ D+F SE + I + +L +G VY+G+L PPK K Sbjct: 240 KMMDLIRSDLALLGIRMDVFFSEKSLY--GTGLIEAALADLDGKGLVYQGVLEPPKGKKP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + R+Q LF+ST GDDVDRP+ KSDGS+TYFA D+AY K +RGFD +I + G+D Sbjct: 298 DDWE-PREQTLFKSTEHGDDVDRPIAKSDGSWTYFAPDIAYHFDKVQRGFDQLIDIFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S ++ +++ L +LV+LY++G P KMSKRAG F+TLR VV++VG Sbjct: 357 HGGYVKRMKAAVSALSNQQVSLDIKLTQLVKLYKNGEPFKMSKRAGTFVTLRDVVEQVGP 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN LDFDF KV+EQSK+NPVFYVQYA+AR S+ +AKD +D Sbjct: 417 DVTRFVMLTRKNDAPLDFDFAKVQEQSKDNPVFYVQYAHARISSVLSKAKDANMKIDVKT 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 F P SE+ +I LAE+PR++E A EP+++AFYLY+LA FH W+ G Sbjct: 477 FKSLKHP-------SEITVIKKLAEWPRLLELAAKHNEPHRVAFYLYELAGDFHALWNIG 529 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +E P RF+Q +N +L+ +L +V AV I +GL I+GV +EM Sbjct: 530 KEAPETRFLQEDNPELSAEKLSMVSAVQLTIAAGLTILGVAPIDEM 575 >gi|149202735|ref|ZP_01879707.1| arginyl-tRNA synthetase [Roseovarius sp. TM1035] gi|149144017|gb|EDM32051.1| arginyl-tRNA synthetase [Roseovarius sp. TM1035] Length = 581 Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust. Identities = 265/587 (45%), Positives = 377/587 (64%), Gaps = 9/587 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF D + L + ++ + + + +E PRD AHG ++TNAAM+L++P GL Sbjct: 1 MNLFTDMRDLVLETLAAMQAGGQLPAGLDMTSVTVEPPRDAAHGDMATNAAMVLAKPAGL 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ + AR+ D V+S +AG GF+NL L P+ +++ + + G YGR+ +G Sbjct: 61 KPREIADALAARLAEDGRVESAEVAGPGFLNLRLVPAVWQRVARAALTEGTGYGRSTLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGP+HVGH R AV GD LA L+ + GYEVTREYYIND GAQ++ LA Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALARLLDYVGYEVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + +G YPG YL VG+ L + + PEE WL ++D++ Sbjct: 181 SVYLRYLEA-HGQAVAFADGTYPGDYLIEVGEALKVQVGDAYVGQPEEVWLEPIRDFATD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM +IR+DL AL ++ D+F SE + I I++L +G +Y G+L PPK K Sbjct: 240 KMMALIREDLAALGVEMDVFYSEKSLY--GTGLIEAAIEDLRSKGLIYRGVLEPPKGKMP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP++KSDG +TYFA D+AY K RGFD +I V G+D Sbjct: 298 EDWE-PREQTLFKSTEHGDDVDRPIMKSDGGWTYFAPDIAYHYDKISRGFDLLIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S + +++ LC+LV+LY++G P KMSKRAG F+TLR VVD+VG+ Sbjct: 357 HGGYVKRMKAAVSALSNGRVPVDIKLCQLVKLYKNGEPFKMSKRAGTFVTLRDVVDQVGA 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFD 478 D RF+ML RKN LDFDF KV EQSK+NPVFYVQYA AR S+ R+A + + D Sbjct: 417 DVTRFVMLTRKNDAPLDFDFDKVLEQSKDNPVFYVQYANARVNSVLRKAAEAGIAVEDAT 476 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L ++ E +EL + +AE+PR++E A + EP+++AFYLYDLAS H W+ Sbjct: 477 LAQADLSGLTHE---AELAVARKIAEWPRLVEIAGRSNEPHRVAFYLYDLASDLHALWNR 533 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G ++ LRF+Q + + ++ L AV +I++GL I+GV EM Sbjct: 534 GNDDASLRFIQEGDVATSQAKIALARAVTVVISAGLGILGVTPAEEM 580 >gi|146276951|ref|YP_001167110.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025] gi|166232831|sp|A4WQZ1|SYR_RHOS5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|145555192|gb|ABP69805.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025] Length = 580 Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust. Identities = 263/557 (47%), Positives = 374/557 (67%), Gaps = 7/557 (1%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 L + +E PRD AHG ++TNAAM+L++P G P IAE + R+ DP + S +AG GF Sbjct: 30 LSAVAVEPPRDPAHGDMATNAAMVLAKPAGKPPRAIAEALATRLAADPRILSAEVAGPGF 89 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 +NL L P+ + +++ ++ +G YGR+ IG G +VN+EFVSANPTGPMHVGH R AVVGD Sbjct: 90 LNLRLRPAVWQGLVARVLQAGDAYGRSTIGAGQRVNVEFVSANPTGPMHVGHVRGAVVGD 149 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 LA L+ F+G++VTREYYIND GAQ++ LA S + RY++A + + ++ EG YPG YL Sbjct: 150 ALARLLVFAGWDVTREYYINDGGAQVDVLARSAYERYREA-HGLEPEIREGLYPGDYLIP 208 Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 VG+ L KY LL+ E WL V++++ + MM++IR+DL AL ++ D++ SE + Sbjct: 209 VGEALKAKYGDSLLDKGEHCWLTDVREFATEMMMQMIREDLAALGVEMDVYSSEKALY-- 266 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 I + L G +YEG+L PPK KT + + R+Q LFRST GDDVDRP+ KSD Sbjct: 267 GTGKIEAALQRLQDMGLIYEGVLEPPKGKTPEDWE-PREQTLFRSTAHGDDVDRPVKKSD 325 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 GS+TYFA D+AY K RGFD +I + G+DH GYVKR++A AA+S+ + +++ L +L Sbjct: 326 GSWTYFAPDIAYHYDKVTRGFDQLIDIFGADHGGYVKRMKAAVAALSDGRVPLDIKLIQL 385 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V+L+++G P KMSKRAG ++TLR VV++VG+D RF+ML RKN LDFDF KV EQSKE Sbjct: 386 VKLWKNGEPFKMSKRAGTYVTLRDVVEQVGADVTRFVMLTRKNDAALDFDFDKVLEQSKE 445 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 NPVFYVQYA AR S+ R+A++ +D + +E+ LI LAE+PR+ Sbjct: 446 NPVFYVQYANARINSVLRKARE--QGMDVADAALACADLDRLDHPAEIALIAKLAEWPRL 503 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 +E A EP+++AFYL++L+S HG W+ G + P LRF+Q ++ ++ ++ L AV Sbjct: 504 VEIAARTNEPHRIAFYLHELSSDLHGLWNRGNDEPGLRFLQ-DDPVVSQAKIALARAVGV 562 Query: 569 IINSGLNIIGVESPNEM 585 +I +GL I+GV EM Sbjct: 563 VICAGLGILGVTPVEEM 579 >gi|84687542|ref|ZP_01015418.1| arginyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654] gi|84664451|gb|EAQ10939.1| arginyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654] Length = 572 Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust. Identities = 269/587 (45%), Positives = 383/587 (65%), Gaps = 18/587 (3%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFAD S + L + + + + + +E PRD AHG ++TNAAM+L++P G Sbjct: 1 MNLFADIRSLVIASLDALVAEGALPAGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAGA 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ + A++ D + S +AG GF+NL L P ++ V++ +YG + +G+ Sbjct: 61 KPRDIADALSAKLAADDRIASAEVAGPGFLNLRLEPGVWAALVEG-VLADPDYGTSDMGQ 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGP+HVGH R AV GD LASL+A++G++VTREYYIND GAQ++ LA Sbjct: 120 GQKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLAYAGHDVTREYYINDGGAQVDVLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + + +G YPG YL VG+ L K + E+ WL V+D++ Sbjct: 180 SVYLRYLEA-HGQEVAFEDGTYPGDYLIEVGEALKAKVGDAFVGKGEQFWLEDVRDFATD 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AM+ +IR DLKAL ++ D+F SE + I I++L +G +Y+G L PPK K + Sbjct: 239 AMLDLIRADLKALGVEMDVFFSEKSLY--GTGRIEAAIEDLRGKGLIYKGTLEPPKGKLS 296 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP++KSDG++TYFA D+AY K RGFD +I V G+D Sbjct: 297 EDWE-PREQTLFKSTDYGDDVDRPIMKSDGAWTYFAPDIAYHYDKVTRGFDQLIDVFGAD 355 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A AA+S+ K +++ L +LV+LY++G P KMSKRAG F+TLR VVDEVG Sbjct: 356 HGGYVKRMKAAVAALSDNKVPLDIKLTQLVKLYKNGEPFKMSKRAGTFVTLRDVVDEVGP 415 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN LDFDF K EQSK+NPVFYVQYA AR S+ R+A D+ Sbjct: 416 DVTRFIMLTRKNDAPLDFDFDKALEQSKDNPVFYVQYANARVHSVLRKAADM-------- 467 Query: 480 FPRNVIP-QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 V P + S D +E+++ LAE+PR++E A EP+++AFYLY+LAS FH W+ Sbjct: 468 ---GVEPGKPSLTDEAEIKVAQKLAEWPRLVEIAARTHEPHRIAFYLYELASEFHALWNK 524 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G ++P LRF+ ++ + T ++ L AV+ +I++GL I+GV EM Sbjct: 525 GNDHPELRFLAESDSQATAAKIALPKAVSVVISAGLGILGVTPLEEM 571 >gi|56697351|ref|YP_167719.1| arginyl-tRNA synthetase [Ruegeria pomeroyi DSS-3] gi|81349499|sp|Q5LQI6|SYR_SILPO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|56679088|gb|AAV95754.1| arginyl-tRNA synthetase [Ruegeria pomeroyi DSS-3] Length = 581 Score = 522 bits (1345), Expect = e-146, Method: Compositional matrix adjust. Identities = 266/587 (45%), Positives = 386/587 (65%), Gaps = 9/587 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF + + L+++ + + + + + +E PRD AHG ++TNAAM+L++P G Sbjct: 1 MNLFTEMRGLVLEALEQMQAEGALPQGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + AR+ D V +AG GF+NL L+ ++++ ++++ G YGR+ +G+ Sbjct: 61 KPRDIAETLAARLAADARVAKAEVAGPGFLNLTLAAPVWQRVVGTVLLDGTAYGRSDMGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGP+HVGH R AV GD LASL+ ++GY+VTREYYIND GAQ++ LA Sbjct: 121 GKKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDYAGYQVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + + +G YPG YL VG+ L DK + PEE WL ++D++ Sbjct: 181 SVYLRYLEA-HGQAVEFVDGTYPGEYLVEVGQALKDKVGDAYVGQPEEVWLEAIRDFATD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM++IR DL L ++ D+F SE + I ID+L +G +Y G L PPK K Sbjct: 240 AMMELIRADLAQLGVKMDVFYSEKSLY--GTGRIEAAIDSLRAKGLIYRGTLEPPKGKLP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP++KSDG++TYFA D+AY K RGFD +I V G+D Sbjct: 298 EDWE-PREQTLFKSTEHGDDVDRPIMKSDGAWTYFAPDIAYHYDKVSRGFDALIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ + +++ LC+LV+L+++G P KMSKRAG+F+TLR VVD+VG+ Sbjct: 357 HGGYVKRMKAAVSALSDGRVPLDIKLCQLVKLWKNGEPFKMSKRAGNFVTLRDVVDQVGA 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFD 478 D RF+ML RKN LDFDF KV EQS+ENPVFYVQYA+AR S+ R+A + D D Sbjct: 417 DVTRFVMLTRKNDAPLDFDFDKVLEQSRENPVFYVQYAHARVSSVLRRAAEAGIDTSDTA 476 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L ++ E +EL ++ LAE+PR++E A EP+++AFYLY+LA FH W+ Sbjct: 477 LRAADLGLLGHE---AELAVMRKLAEWPRLVEIAARTNEPHRIAFYLYELAGDFHALWNR 533 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G + LRF+Q + + ++ L +VA +I++GL I+GV EM Sbjct: 534 GNDVSELRFIQDGDEGTSQAKIALARSVAVVISAGLAILGVTPAEEM 580 >gi|119384607|ref|YP_915663.1| arginyl-tRNA synthetase [Paracoccus denitrificans PD1222] gi|166232819|sp|A1B373|SYR_PARDP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|119374374|gb|ABL69967.1| arginyl-tRNA synthetase [Paracoccus denitrificans PD1222] Length = 581 Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust. Identities = 271/586 (46%), Positives = 383/586 (65%), Gaps = 7/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF+D + + L +++ ++ + + +E PRD AHG ++TNAAM+L++P G Sbjct: 1 MNLFSDIRTLVIGALAQMEQAGELPAGLDTANVTVEPPRDAAHGDMATNAAMVLAKPAGK 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + AR+ DP + S +AG GF+NL L + ++ + + G +YGR+ +G+ Sbjct: 61 KPRDIAEALAARLAADPRIASAEVAGPGFLNLRLVSGEWQSVVRAALAEGGDYGRSEMGR 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G ++N+EFVSANPTGPMHVGH R AV GD LA+L+ FSG+EVTREYYIND GAQ++ LA Sbjct: 121 GQRINVEFVSANPTGPMHVGHTRGAVFGDALAALLDFSGHEVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++A + ++ EG YPG YL VG+ L KY LL+ PEE+WL V+D++ + Sbjct: 181 SAYERYREA-NGLEPEIREGLYPGDYLIPVGEALKTKYGETLLDKPEEEWLAEVRDFATR 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL LN+ D+F SE + I I+ L + G +YEG+L PPK KT Sbjct: 240 AMMDMIREDLALLNVHMDVFSSEKALY--GTGRIEAAIERLRQAGLIYEGVLEPPKGKTP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LFRST GDDVDRP+ KSDGS+TYFA D+AY K ERG+D +I V G+D Sbjct: 298 EDWE-PREQTLFRSTAHGDDVDRPVKKSDGSWTYFAPDIAYHWDKIERGYDALIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR+ A A+S+ + ++V L +LVRL+++G P KMSKRAG F+TLR VV++ G+ Sbjct: 357 HGGYVKRMTAAVKALSDGRVPLDVKLIQLVRLFKNGEPFKMSKRAGTFVTLRDVVEQAGA 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF ML RKN LDFDF +V EQSK+NPV+YVQYA AR S+ +A + D Sbjct: 417 DVTRFHMLTRKNDAALDFDFARVLEQSKDNPVWYVQYASARVNSVLNKAAGMGVDTTDAA 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + Q S +EL+L +AE+PR +E A A EP+++AF+LYD+AS H W+ G Sbjct: 477 LAQADLAQLSH--PAELELARKVAEWPRTVEIAARAHEPHRIAFFLYDIASELHSLWNRG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P LRF+Q + ++ L +V +I++GL I+GV EM Sbjct: 535 NDEPALRFLQEGDPAAMAAKIALARSVGVVISAGLGILGVTPAKEM 580 >gi|329114103|ref|ZP_08242867.1| Arginyl-tRNA synthetase [Acetobacter pomorum DM001] gi|326696642|gb|EGE48319.1| Arginyl-tRNA synthetase [Acetobacter pomorum DM001] Length = 599 Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust. Identities = 274/580 (47%), Positives = 373/580 (64%), Gaps = 23/580 (3%) Query: 24 VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83 V ++ L R+ + RD AHG ++TNAA++L++ P IA +VA ++ V SV Sbjct: 24 VPEETLARVELTPTRDPAHGDMATNAALLLAKVARRKPSDIAADLVAALQKVDGVASVAA 83 Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143 AG GF+N+ L P +R +L +++ +G YG + GKG +VN+E+VSANPTGPMHVGHCR Sbjct: 84 AGPGFVNITLKPDVMRSVLPAVLRAGEAYGASQAGKGLRVNVEYVSANPTGPMHVGHCRG 143 Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL-----YNNDSDLPE 198 AVVGD LA+LMA +G+ VT+E+YINDAGAQ+ LA + +WRY QAL ++ S L Sbjct: 144 AVVGDALANLMAKAGFAVTKEFYINDAGAQVKALAWAAYWRYLQALGTKMTQDDFSALAP 203 Query: 199 G--YYPGVYLKHVGKELADKYSSEL---------LNFPEEKWLPIVKDYSVQAMMKIIRD 247 G Y G YL VG ELA +Y ++L L PE WL V+ ++V M+ I++ Sbjct: 204 GGLQYQGEYLIPVGMELAAEYGNKLTETDADGAPLPAPEATWLETVRGFAVAHMLTAIKE 263 Query: 248 DLKALNIQHDIFISEDD-FHRGDPSPIRDI-IDNLARQGYVYEGILPPPKSKTTQKCDMD 305 DL AL + HD+F SE + HRG + D I L +QG +YEG+L PPK K + + + Sbjct: 264 DLAALGVHHDVFTSEAEVLHRG----VTDAAISKLEQQGLLYEGVLEPPKGKLPEDWE-E 318 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365 R+QLLFRST GDDVDRPL KSDG+ TYFA D+ Y K RG MI V G+DH GYVK Sbjct: 319 REQLLFRSTQFGDDVDRPLRKSDGTNTYFANDIGYHADKVARGAQMMIDVWGADHGGYVK 378 Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425 R++A A++ + V+LC++V + RDG P+KMSKRAG F+TLR ++DEVG D+VRF Sbjct: 379 RMKAAVKAITGDTVPLEVVLCQIVHILRDGQPVKMSKRAGTFVTLRDLIDEVGRDAVRFT 438 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 ML RK+ ++FD V Q ++NPVFYVQYA+ARCRS+ R A + D D Sbjct: 439 MLTRKSDAQMEFDLDLVVAQQRDNPVFYVQYAHARCRSVLRAAAEAAVYGDTDDAALASA 498 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 ES +E+ LI LAE+PR++E A +A+EP+++AFYL D+A FH W+ GR++ L Sbjct: 499 SLESLTSDAEMALIRRLAEWPRMVEAAALAREPHRVAFYLADVAGDFHALWNRGRDDASL 558 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 RF+Q + + T RL LV A A +I SGL I+GVE EM Sbjct: 559 RFLQPDAVEATRARLALVAATAVVIRSGLAIMGVEPVEEM 598 >gi|241762271|ref|ZP_04760352.1| arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260752688|ref|YP_003225581.1| arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|241373174|gb|EER62804.1| arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258552051|gb|ACV74997.1| arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 574 Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust. Identities = 273/591 (46%), Positives = 382/591 (64%), Gaps = 23/591 (3%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M L+ F+++L + L + + + + R+ +E PRD +HG L+ NAAM+L++ Sbjct: 1 MTLYRHFAAQLSSILDTFEAEGLLPAGLDRSRVAVEPPRDPSHGDLAINAAMVLAKAAKT 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +AE +V + V+SV IAG GFIN+ L+ RK L+ I+ G +YGR+ IG+ Sbjct: 61 APRALAEKLVESLSQLEGVESVEIAGPGFINIRLTDDCWRKELTHILEQGQDYGRSDIGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 +VN+E+VSANPTGPMH+GHCR AVVGD LASL+ F+GY+VTREYY+NDAG Q+ TLA Sbjct: 121 NLRVNVEYVSANPTGPMHMGHCRGAVVGDALASLLDFAGYKVTREYYVNDAGQQVQTLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++AL + +PEG YPG YL VGK LA+KY LN PE +WL + ++ +V Sbjct: 181 SAYMRYREAL-GEEITIPEGLYPGDYLVPVGKLLAEKYGDRYLNAPESEWLALFRETTVA 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IRDDL L I HD F SE H+ ++ ID L ++G +Y+G+L PK +T Sbjct: 240 AMMDMIRDDLALLGIHHDKFTSEAALHKA--GIVQKAIDKLEKEGLIYKGVLEAPKGETP 297 Query: 300 QKCDMDRKQL-LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + D + +L LFR+T GDD DRP+ KSDGSYTYF ADLAY K D ++ + G+ Sbjct: 298 E--DWEPVELTLFRATKFGDDSDRPVQKSDGSYTYFGADLAYHAEKAATA-DQLVDIWGA 354 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH+G VKR++A AA+++ K ++V L ++V L R G P+KMSKR+G+F+TL VV EVG Sbjct: 355 DHAGTVKRIKAAVAALTQNKVPLDVKLVQMVHLLRGGEPVKMSKRSGNFVTLADVVSEVG 414 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D VRF ML RK +DFDF KV E SK+NPVFYVQYA+AR S+ R+ Sbjct: 415 RDVVRFSMLTRKADAQMDFDFEKVIEASKDNPVFYVQYAHARVHSLHRR----------- 463 Query: 479 LFPRNV-IPQESE---FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 L N+ +P++++ D EL LI A++PR+IE A +A EP+++ FYL+ LA+ FH Sbjct: 464 LVSENITLPEKADLNLLDKEELALIQQAAQFPRLIEAAAVAHEPHRIVFYLFTLAADFHS 523 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W+ G +NP RF+ +N T RL L AV +I +GL ++GV + EM Sbjct: 524 LWNKGNDNPDRRFLLPDNPAKTAARLALADAVGQVIRNGLGVVGVNASEEM 574 >gi|254462799|ref|ZP_05076215.1| arginyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083] gi|206679388|gb|EDZ43875.1| arginyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083] Length = 577 Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust. Identities = 264/587 (44%), Positives = 385/587 (65%), Gaps = 13/587 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF D S + L+ + + + + + +E PRD AHG ++TNAAM+L++P + Sbjct: 1 MNLFDDIRSAVLTSLEAMQAQGVLPADLDFANVAVEPPRDGAHGDMATNAAMVLAKPAKM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ + + +DP ++SV +AG GF+N+ LS + + ++ +++ G ++GR+ +G+ Sbjct: 61 KPRDIADALARHLILDPRIESVDVAGPGFLNMRLSSALWQGVIGTVLDQGADFGRSDMGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGP+HVGH R AV GD LASL+ ++GY VTREYYIND GAQ++ LA Sbjct: 121 GKKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDYAGYAVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + + +G YPG YL VG+EL +K S + E WL V+++S + Sbjct: 181 SVYLRYLEA-HGQEVAFEDGTYPGDYLIPVGEELKEKVSDAYVGKHESDWLLDVREFSTE 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM ++R DL +L I+ D+F SE + I ID L +G +YEG+L PPK K Sbjct: 240 KMMDLVRADLASLGIEMDVFYSEKSLY--GTGRIEAAIDALKDKGLIYEGVLEPPKGKKP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP++KSDG++TYFA D+AY K RGFD +I V G+D Sbjct: 298 EDWE-PREQTLFKSTEHGDDVDRPVMKSDGAWTYFAPDIAYHYDKVSRGFDMLIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ K +++ L +LV+L+++G P KMSKRAG F+TLR VVD+VG+ Sbjct: 357 HGGYVKRMKAAVSALSDGKVPLDIKLTQLVKLFKNGEPFKMSKRAGTFVTLRDVVDQVGA 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 + RF ML RKN LDFDF KV EQSK+NPVFYVQYA AR S+ R+A D DL Sbjct: 417 GATRFHMLTRKNDAPLDFDFDKVLEQSKDNPVFYVQYANARVHSVLRKASDAGLDL---- 472 Query: 480 FPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + P ++ + +E+ + LAE+PR++ A EP+++AFYLYDLAS FH ++ Sbjct: 473 ---SATPDLTQLNHEAEIAVAKKLAEWPRLVALAARTNEPHRIAFYLYDLASEFHALYNR 529 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G E P LRF+Q ++ ++ L +V+ +I +GL I+GV+ EM Sbjct: 530 GNELPELRFLQDGQDATSISKIALARSVSVVICAGLGILGVDPVEEM 576 >gi|283856343|ref|YP_162578.2| arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4] gi|283775340|gb|AAV89467.2| arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4] Length = 574 Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust. Identities = 273/591 (46%), Positives = 382/591 (64%), Gaps = 23/591 (3%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M L+ F+++L + L + + + + R+ +E PRD +HG L+ NAAM+L++ Sbjct: 1 MTLYRHFAAQLSSILDTFEAEGLLPAGLDRSRVAVEPPRDPSHGDLAINAAMVLAKAAKT 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +AE +V + V+SV IAG GFIN+ L+ RK L+ I+ G +YGR+ IG+ Sbjct: 61 APRALAEKLVESLSQLEGVESVEIAGPGFINIRLTDDCWRKELTHILEQGQDYGRSDIGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 +VN+E+VSANPTGPMH+GHCR AVVGD LASL+ F+GY+VTREYY+NDAG Q+ TLA Sbjct: 121 NLRVNVEYVSANPTGPMHMGHCRGAVVGDALASLLDFAGYKVTREYYVNDAGQQVQTLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++AL + +PEG YPG YL VGK LA+KY LN PE +WL + ++ +V Sbjct: 181 SAYMRYREAL-GEEITIPEGLYPGDYLVPVGKLLAEKYGDRYLNAPESEWLALFRETTVA 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IRDDL L I HD F SE H+ ++ ID L ++G +Y+G+L PK +T Sbjct: 240 AMMDMIRDDLALLGIHHDKFTSEAALHKA--GIVQKAIDKLEKEGLIYKGVLEAPKGETP 297 Query: 300 QKCDMDRKQL-LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + D + +L LFR+T GDD DRP+ KSDGSYTYF ADLAY K D ++ + G+ Sbjct: 298 E--DWEPVELTLFRATKFGDDSDRPVQKSDGSYTYFGADLAYHAEKAATA-DQLVDIWGA 354 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH+G VKR++A AA+++ K ++V L ++V L R G P+KMSKR+G+F+TL VV EVG Sbjct: 355 DHAGTVKRIKAAVAALTQNKVPLDVKLVQMVHLLRGGEPVKMSKRSGNFVTLADVVSEVG 414 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D VRF ML RK +DFDF KV E SK+NPVFYVQYA+AR S+ R+ Sbjct: 415 RDVVRFSMLTRKADAQMDFDFEKVIEASKDNPVFYVQYAHARVHSLHRR----------- 463 Query: 479 LFPRNV-IPQESE---FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 L N+ +P++++ D EL LI A++PR+IE A +A EP+++ FYL+ LA+ FH Sbjct: 464 LVSENITLPEKADLNLLDKEELALIQQAAQFPRLIEAAAVAPEPHRIVFYLFTLAADFHS 523 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W+ G +NP RF+ +N T RL L AV +I +GL ++GV + EM Sbjct: 524 LWNKGNDNPDRRFLLPDNPAKTAARLALADAVGQVIRNGLGVVGVNASEEM 574 >gi|94496953|ref|ZP_01303527.1| arginyl-tRNA synthetase [Sphingomonas sp. SKA58] gi|94423629|gb|EAT08656.1| arginyl-tRNA synthetase [Sphingomonas sp. SKA58] Length = 575 Score = 518 bits (1335), Expect = e-145, Method: Compositional matrix adjust. Identities = 272/589 (46%), Positives = 375/589 (63%), Gaps = 19/589 (3%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDR--IVIERPRDCAHGHLSTNAAMILSRPLG 58 M L+ F++ L L ++ V L+R + +E PRD +HG L+TNAAM+L++P G Sbjct: 1 MSLYTRFTAHLDAVLDALEAD-GVLPAGLNRKPVTVEPPRDSSHGDLATNAAMVLAKPAG 59 Query: 59 LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +P +AE IVA+++ +V S IAG GFIN+ L+ + R L++I G YGR+ +G Sbjct: 60 TNPRALAEAIVAKLQALDEVTSAAIAGPGFINMTLTDATWRAELAAIHADGANYGRSALG 119 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 +G VN+E+VSANPTGPMH+GHCR AVVGD LA+L+ ++G++V REYYINDAG Q++ LA Sbjct: 120 QGVSVNVEYVSANPTGPMHMGHCRGAVVGDALATLLEYAGHKVIREYYINDAGGQVDVLA 179 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 S RY++AL + +PEG YPG YL VG+ LA +Y PE WL + ++V Sbjct: 180 RSAHLRYREALGEDVGAIPEGLYPGDYLVPVGQALAAEYGDRFAGAPESDWLVTFRTFAV 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFH-RGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 MM +IR DL L I HDIF SE + G P L VY+G+L PK + Sbjct: 240 AKMMDMIRSDLALLGIHHDIFASEAELQAAGKPDEAEAW---LRAHDLVYDGVLEAPKGE 296 Query: 298 TTQKCDMDRKQL-LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 D + +L LFRST GDD DRP+ KS+G++TYF AD+AY K + D +I + Sbjct: 297 LPD--DWEPVELPLFRSTKFGDDQDRPIKKSNGAWTYFGADMAYHFQKAQSA-DQLIDIW 353 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G+DH+G VKR++A AA++E KA+ +V L ++VRL RDG P+KMSKRAG+F+TL VV E Sbjct: 354 GADHAGTVKRIQAAVAALTEGKARFDVKLIQMVRLLRDGEPVKMSKRAGNFVTLADVVQE 413 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG D VRF ML RK +DFDF KV E SK+NPVFYVQYA+AR S+ R+A++ L Sbjct: 414 VGKDVVRFTMLTRKADAQMDFDFAKVVEASKDNPVFYVQYAHARISSLGRRAEEAGIALP 473 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 P S T+EL L+ A++PRV+E A A+EP+++AFYL DLAS FHG W Sbjct: 474 --------APDLSLLGTAELSLVKLAAQFPRVVEGAAQAREPHRIAFYLNDLASAFHGWW 525 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + G ++P R ++A++ LT RL L + II +GL ++GV + EM Sbjct: 526 NMGNDDPGARVIRADDPALTSTRLSLAQGIGQIIRNGLALMGVAALTEM 574 >gi|260427188|ref|ZP_05781167.1| arginyl-tRNA synthetase [Citreicella sp. SE45] gi|260421680|gb|EEX14931.1| arginyl-tRNA synthetase [Citreicella sp. SE45] Length = 585 Score = 518 bits (1335), Expect = e-145, Method: Compositional matrix adjust. Identities = 265/587 (45%), Positives = 389/587 (66%), Gaps = 10/587 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCK-IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF D + + ++ + + I E + +E PRD HG ++TNAAM+L++P Sbjct: 6 MNLFTDIRALVLQAIEALQAEGILPEGLNTAPVTVEPPRDPLHGDMATNAAMVLAKPAKA 65 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + A+I D + + +AG GF+NL L+PS + + +++ G ++GR+ +G+ Sbjct: 66 RPRDIAEALAAKIGADDRIVAAEVAGPGFLNLRLAPSVWQALPGAVLTQGTDFGRSDMGQ 125 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G ++N+E+VSANPTGP+HVGH R AV GD LASL+ F+GY+VTREYYIND GAQ++ LA Sbjct: 126 GARINVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGYDVTREYYINDGGAQVDVLAR 185 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +AL ++ + +G YPG YL VG+ LA + + ++ PEE WL +++++ Sbjct: 186 SVYLRYLEAL-GHEVEFADGTYPGDYLIPVGEMLAARVGEQYVDQPEEVWLEEIRNFATD 244 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MMK+IR+DLK L ++ D F SE + I I++L +G +Y G+L PPK KT Sbjct: 245 EMMKLIREDLKLLGVEMDHFFSEKSLY--GTGRIEAAIESLDAKGLIYRGVLEPPKGKTP 302 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP+ KSDG++TYFA D+AY K RGFD +I V G+D Sbjct: 303 EDWE-PREQTLFKSTEHGDDVDRPIKKSDGAWTYFAPDIAYHYDKVSRGFDQLIDVFGAD 361 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ K +++ L +LV+L+++G P KMSKRAG F+TLR VV+EVG Sbjct: 362 HGGYVKRMKAAVSALSDGKTPLDIKLIQLVKLFKNGEPFKMSKRAGTFVTLRDVVEEVGP 421 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFD 478 D RF+ML RKN LDFDF K EQSKENPVFYVQYA+AR S+ R+A + D+ D Sbjct: 422 DVTRFVMLTRKNDASLDFDFAKAVEQSKENPVFYVQYAHARICSVMRKAVEQGIDVSDAA 481 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L ++ + E +EL L+ +AE+PR++E A EP+K+A +L +LAS HG W+ Sbjct: 482 LARADLTALDHE---AELGLMKKVAEWPRLVEIAAKGHEPHKVAIWLNELASELHGLWNR 538 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G + P LRF+Q ++ + + ++ L +VA +I++GL I+GV EM Sbjct: 539 GHDEPGLRFLQ-DDAETSQRKIALARSVAVVISAGLGILGVTPAEEM 584 >gi|86138649|ref|ZP_01057222.1| arginyl-tRNA synthetase [Roseobacter sp. MED193] gi|85824709|gb|EAQ44911.1| arginyl-tRNA synthetase [Roseobacter sp. MED193] Length = 581 Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust. Identities = 265/586 (45%), Positives = 376/586 (64%), Gaps = 7/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF+D + + + L + + + E + + +E PRD AHG ++TNAAM+L++P + Sbjct: 1 MNLFSDIRALVIDSLTAMTAEGALPEGQDFANVAVEPPRDSAHGDMATNAAMVLAKPAKM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ + A++ D + S +AG GF+NL LSP + +L +++ G++YGR +G+ Sbjct: 61 KPRDIADALAAKLAQDARIASAEVAGPGFLNLRLSPVVWQSVLGAVLEGGLDYGRANLGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGP+HVGH R AV GD LASL+ ++GY+VTREYYIND G Q++ LA Sbjct: 121 GKKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLGYAGYDVTREYYINDGGGQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + + +G YPG YLK VG L DK LN E+ WL V+++S Sbjct: 181 SVYLRYLEA-HGQEVAFADGTYPGDYLKPVGAALKDKVGDAYLNKGEDVWLSEVREFSTD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL L I+ D+F SE + I ++ L +G +Y+G+L PPK K Sbjct: 240 AMMDLIREDLALLGIKMDVFYSEKSLY--GTGRIEAALEELESKGLIYQGVLEPPKGKKP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + R+Q LF+ST GDDVDR + KSDG++TYFA D+AY K RGFD +I V G+D Sbjct: 298 DDWE-PREQTLFKSTDHGDDVDRAVKKSDGAWTYFAPDIAYHYDKVSRGFDELIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ K +++ LC+LV+L++DG KMSKRAG F+TLR VVD VG+ Sbjct: 357 HGGYVKRMKAAVSALSDGKVPLDIKLCQLVKLFKDGQEFKMSKRAGTFVTLRDVVDAVGA 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RFM+L RKN + DFD K EQSK+NP+FYVQYA AR S R+A + D + Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPIFYVQYANARICSTLRKAGEADIATDDAV 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + Q S ++L ++ LAE+PR IE A EP+++AFYLYDLAS HG + G Sbjct: 477 LGAADLAQVSH--PAQLAVVKKLAEWPRQIEIAARTNEPHRVAFYLYDLASELHGLYHLG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + LRFV ++ T L L +V+ +I++GL I+GV+ EM Sbjct: 535 KTEFGLRFVNESSETATHANLALARSVSIVISAGLGILGVKPAQEM 580 >gi|296284542|ref|ZP_06862540.1| arginyl-tRNA synthetase [Citromicrobium bathyomarinum JL354] Length = 581 Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust. Identities = 269/592 (45%), Positives = 380/592 (64%), Gaps = 26/592 (4%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 ++A ++ R+ L ++ + + + + +E PRD AHG ++TNAAM+L++P +P Sbjct: 7 IYAAYAERIDAVLSALEAEGTLPPDVSRANVSVEPPRDPAHGDIATNAAMVLAKPAKTNP 66 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +AE IV +K DPD++S IAG GFINL ++ + +I G EYGR+ +GK T Sbjct: 67 RALAEQIVEHLKRDPDIESAEIAGPGFINLRIADRAWVDEIRAIGSLGGEYGRSSMGKDT 126 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 ++N+E+VSANPTGPMH+GHCR AVVGD LASL+ +G+ VTREYY+NDAG Q++ LA S Sbjct: 127 RINVEYVSANPTGPMHMGHCRGAVVGDALASLLDATGHSVTREYYVNDAGGQVDVLARSA 186 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 RY++AL + ++PEG YPG YL VGK LA+++ E PE +WLP+ + +V AM Sbjct: 187 HVRYREALGESVGEIPEGLYPGEYLIPVGKALAEEFGDEYAAAPESEWLPLFRPRAVAAM 246 Query: 242 MKIIRDDLKALNIQHDIFISEDDFH-RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 M +IR DL L I HD+F SE + G P+ L QG VY+G L PK KT + Sbjct: 247 MDLIRADLAKLGIAHDVFASEAELQAAGKPAEAEAW---LREQGLVYDGELEKPKGKTPE 303 Query: 301 KCDMDRKQL-LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 D + +L LFRST GDD DRP+ KS+GS+TYF ADLAY K E D +I + G+D Sbjct: 304 --DWEPVELPLFRSTQFGDDQDRPIKKSNGSWTYFGADLAYHMQKAENA-DALIDIWGAD 360 Query: 360 HSGYVKRLEAVAAAVSEKKAQ---INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 H+G VKR++A AA+S+ + + +V L ++V+L RDG P+KMSKR+G+F+TL VVDE Sbjct: 361 HAGTVKRIKAAVAALSQGQGKPIPFDVKLVQMVQLMRDGEPVKMSKRSGNFVTLADVVDE 420 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG D VRF ML RK +DFDF KV E SK+NPVFYVQYA+AR S R+A + Sbjct: 421 VGKDVVRFTMLTRKPEAQMDFDFAKVVEASKDNPVFYVQYAHARICSTMRKAAE------ 474 Query: 477 FDLFPRNVIPQESEFD---TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 + P + D ++ L+ A+YPR++E+A A+EP+++AFYLYDLA+ FH Sbjct: 475 -----EGLAPSDEALDALTADDVALVKLAAQYPRLVESAAQAREPHRIAFYLYDLAAAFH 529 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W+ G ++ R + +RKL+ RL LV + +I +GL ++GVE+ EM Sbjct: 530 AFWNAGNDDSSKRVILTQDRKLSGARLYLVAQIGQVIRNGLGLLGVEAVEEM 581 >gi|294012801|ref|YP_003546261.1| arginyl-tRNA synthetase [Sphingobium japonicum UT26S] gi|292676131|dbj|BAI97649.1| arginyl-tRNA synthetase [Sphingobium japonicum UT26S] Length = 575 Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust. Identities = 272/588 (46%), Positives = 373/588 (63%), Gaps = 17/588 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGL 59 M L+ F++ L L ++ + + + + +E PRD +HG L+TNAAM+L++P G Sbjct: 1 MSLYNRFTAHLDAVLDALEADGTLPAGLNRKPVTVEPPRDASHGDLATNAAMVLAKPAGS 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +AE I A ++ +V+ IAG GFINL L+ + R L++I V +YGR+ G Sbjct: 61 NPRALAEKIAAGLERLDEVEGASIAGPGFINLRLTDATWRAELAAIHVEAEDYGRSSTGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G VN+E+VSANPTGPMH+GHCR AVVGD LA+L+ G++V REYYINDAG Q++ LA Sbjct: 121 GVTVNVEYVSANPTGPMHMGHCRGAVVGDALATLLEHVGHKVIREYYINDAGGQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S RY++AL ++PEG YPG YL VG+ LA +Y + PE +WL + + +V Sbjct: 181 SAHVRYREALGETVGEIPEGLYPGDYLVPVGQALAAEYGDRYVGAPEGEWLVLFRTKAVA 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFH-RGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 AMM++IR DL L I HDIF SE + G P L VY+G+L PK +T Sbjct: 241 AMMEMIRSDLALLGIHHDIFSSEAELQAAGKPEAAEKW---LREHDLVYDGVLEAPKGET 297 Query: 299 TQKCDMDRKQL-LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 + D + +L LFRST GDD DRP+ KS+GS+TYF AD+AY K + D +I + G Sbjct: 298 PE--DWEPVELPLFRSTRFGDDQDRPIRKSNGSWTYFGADMAYHYQKAQTA-DQLIDIWG 354 Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 +DH G VKR++A AA++E KA+ +V L ++VRL RDG P+KMSKRAG+F+TL VV EV Sbjct: 355 ADHGGTVKRIQAAVAALTEGKARFDVKLIQMVRLLRDGEPVKMSKRAGNFVTLADVVREV 414 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G D VRF ML RK +DFDF KV E SK+NPVFYVQYA+AR S+ R+A++ DL Sbjct: 415 GKDVVRFTMLTRKADAQMDFDFAKVVEASKDNPVFYVQYAHARISSLGRRAEEAGMDLP- 473 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 P S T EL L+ A++PRV+E A +A+EP+++AFYL DLAS FHG W+ Sbjct: 474 -------APDLSRLGTEELGLVKLAAQFPRVVEGAALAREPHRIAFYLNDLASAFHGWWN 526 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G +NPR R + ++ T RL L + II +GL ++GV + EM Sbjct: 527 LGNDNPRARVILTDDPATTSARLFLSRGIGQIIRNGLALMGVAALTEM 574 >gi|163739603|ref|ZP_02147012.1| arginyl-tRNA synthetase [Phaeobacter gallaeciensis BS107] gi|161387062|gb|EDQ11422.1| arginyl-tRNA synthetase [Phaeobacter gallaeciensis BS107] Length = 581 Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust. Identities = 268/588 (45%), Positives = 374/588 (63%), Gaps = 11/588 (1%) Query: 1 MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF D S + + L +D E + +E PRD AHG ++TNAAM+L++P + Sbjct: 1 MNLFTDIRSLVLDCLTAMVDEGTLPEGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAKM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ + ++ D V S +AG GF+NL L S + +L +++ I++GR+ +G Sbjct: 61 KPRDIADALAGKLAADARVTSAEVAGPGFLNLRLDRSSWQSVLGAVLAEDIKFGRSDLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGP+HVGH R AV GD LASL+ F GY+VTREYYIND G Q++ LA Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFVGYDVTREYYINDGGGQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + + +G YPG YL VG+ L DK +N PE+ WL +++++ Sbjct: 181 SVYLRYLEA-HGQEVAFVDGTYPGDYLVPVGQALKDKVGDAYVNQPEDVWLEEIRNFATD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL +L IQ D F SE + I + +L +G +YEG+L PPK K Sbjct: 240 AMMDLIRADLASLGIQMDKFFSEKSLY--GTGLIESALKSLDDKGLIYEGVLEPPKGKKP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + R+Q LF+ST GDDVDRP+ KSDG++TYFA D+AY K ERGFD +I + G+D Sbjct: 298 DDWE-PREQTLFKSTEHGDDVDRPVKKSDGAWTYFAPDIAYHYDKVERGFDMLIDIFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ + +++ LC+LV+L++DG KMSKRAG F+TLR VVD VG Sbjct: 357 HGGYVKRMKAAVSALSDGRVPLDIKLCQLVKLFKDGQEFKMSKRAGTFVTLRDVVDAVGP 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD--IFPDLDF 477 D RFM+L RKN + DFD K EQSK+NPVFYVQYA AR S R+A + I D D Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPVFYVQYANARICSTLRKAAEAGITTD-DA 475 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 L ++ + D ++L + LAE+PR++E A EP+++AFYLYDLAS HG + Sbjct: 476 TLAAADLTLLQ---DDAQLTVAKKLAEWPRLVEIAARTNEPHRVAFYLYDLASELHGLYH 532 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G+ N LRFV +N T ++ L AV+ +I++GL I+GV EM Sbjct: 533 LGKTNEGLRFVNESNPSATHAKMALAKAVSIVISAGLGILGVTPAQEM 580 >gi|99080744|ref|YP_612898.1| arginyl-tRNA synthetase [Ruegeria sp. TM1040] gi|122984355|sp|Q1GI80|SYR_SILST RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|99037024|gb|ABF63636.1| arginyl-tRNA synthetase [Ruegeria sp. TM1040] Length = 580 Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust. Identities = 261/595 (43%), Positives = 373/595 (62%), Gaps = 25/595 (4%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF D + + + L + + + + + + +E PRD AHG ++TNAAM+L++P + Sbjct: 1 MNLFTDIRTLVIDSLAAMTAEGALPEGLDFANVTVEPPRDAAHGDMATNAAMVLAKPAKM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + A++ D + S +AG GF+NL L S + +L + + YGR+ +G+ Sbjct: 61 KPRDIAEALAAKLAQDKRITSAEVAGPGFLNLRLDLSVWQDVLGKALNAEEAYGRSDMGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGP+HVGH R AV GD LASL+ F+GY+VTREYYIND GAQ++ LA Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGYDVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY +A + + P+G YPG YLK VG L DK+ + PEE WL V++++ Sbjct: 181 SAYLRYLEA-HGQSVEFPDGTYPGEYLKDVGAALKDKFGDRFVGQPEETWLEEVRNFATD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM +IR+DL L ++ D+F SE + I +++L +G +YEG+L PPK K Sbjct: 240 MMMDLIREDLALLGVEMDVFYSEKSLY--GTGRIEAALESLDAKGLIYEGVLEPPKGKKP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + R Q LF+ST GDDVDRP+ KSDG++TYFA D+AY K RGFD +I + G+D Sbjct: 298 DDWE-PRIQTLFKSTEHGDDVDRPVKKSDGAWTYFAPDIAYHYDKVSRGFDMLIDIFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ K ++V LC+LV+L++DG KMSKRAG F+TLR VVD VG+ Sbjct: 357 HGGYVKRMKAAVSALSDGKVPLDVKLCQLVKLFKDGQEFKMSKRAGTFVTLRDVVDAVGA 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RFM+L RKN + DFD K EQSK+NPVFYVQYA AR S R+A++ Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPVFYVQYANARIHSTLRKAREA-------- 468 Query: 480 FPRNVIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLAS 530 + E+ ++L L+ H +AE+PR +E A EP+++AF+LY+LAS Sbjct: 469 ---GIACDEATLSGADLSLLTHDAQLAVARKVAEWPRQVEIAARTNEPHRIAFFLYELAS 525 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 HG + G+ LRFV ++ T L L AV+ +I++GL I+GV+ EM Sbjct: 526 DLHGLYHLGKSEESLRFVNESSELATHANLALARAVSIVISAGLGILGVKPAQEM 580 >gi|114762852|ref|ZP_01442284.1| arginyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601] gi|114544462|gb|EAU47469.1| arginyl-tRNA synthetase [Roseovarius sp. HTCC2601] Length = 580 Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust. Identities = 267/587 (45%), Positives = 385/587 (65%), Gaps = 10/587 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF D + + ++ + + + + + + +E PRD HG ++TNAAM+L++P Sbjct: 1 MNLFTDIRALVLQAIEALQAEGALPEGLATAAVTVEPPRDPLHGDMATNAAMVLAKPAKA 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + A+I D VD +AG GF+NL L+PS + + ++ +G ++GR+ +G+ Sbjct: 61 KPRDIAEALAAKIAADDRVDHAEVAGPGFLNLRLAPSVWQALPQGVLAAGTDFGRSQMGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGP+HVGH R AV GD LASL+ F+GY+VTREYYIND GAQ++ LA Sbjct: 121 GAKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGYDVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A ++ + +G YPG YL VG++L ++ + PEE WL V++++ Sbjct: 181 SVYLRYLEA-QGHEVEFADGTYPGDYLIPVGEKLKEQVGDRYVGQPEEVWLEEVRNFATD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM +IR+DLK L ++ D F SE + I I++L +G +Y G+L PPK K Sbjct: 240 EMMALIREDLKMLGVEMDQFFSEKSLY--GTGRIEAAIESLDAKGLIYRGVLEPPKGKKP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP++KSDG++TYFA D+AY K RG+D +I V G+D Sbjct: 298 EDWE-PREQTLFKSTEHGDDVDRPIMKSDGAWTYFAPDIAYHYDKVSRGYDQLIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ K +++ L +LV+LY++G P KMSKRAG F+TLR VV+EVG Sbjct: 357 HGGYVKRMKAAVSALSDGKTPLDIKLIQLVKLYKNGEPFKMSKRAGTFVTLRDVVEEVGP 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFD 478 D RF+ML RKN LDFDF K EQSKENPVFYVQYA+AR S+ R+A + D+ D Sbjct: 417 DVTRFVMLTRKNDASLDFDFAKAVEQSKENPVFYVQYAHARICSVMRKATEAGVDVSDAA 476 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L +V E +EL L+ LAE+PR++E A EP+K+A +L +LAS H W+ Sbjct: 477 LAGADVSVLSHE---AELGLMKKLAEWPRLVEIAAKGHEPHKVAIWLNELASDLHALWNK 533 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G + P LRF+Q ++ L+ ++ L AVA +I++GL I+GV EM Sbjct: 534 GHDEPALRFLQ-DDAALSQSKIALARAVAVVISAGLGILGVTPVEEM 579 >gi|258543179|ref|YP_003188612.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01] gi|256634257|dbj|BAI00233.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01] gi|256637317|dbj|BAI03286.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03] gi|256640369|dbj|BAI06331.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07] gi|256643426|dbj|BAI09381.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22] gi|256646481|dbj|BAI12429.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26] gi|256649534|dbj|BAI15475.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32] gi|256652520|dbj|BAI18454.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655578|dbj|BAI21505.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12] Length = 599 Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust. Identities = 271/580 (46%), Positives = 371/580 (63%), Gaps = 23/580 (3%) Query: 24 VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83 V ++ L R+ + RD AHG ++TNAA++L++ P IA +V ++ V SV Sbjct: 24 VPEETLARVELTPTRDPAHGDMATNAALLLAKVARRKPADIAADLVTALQKVEGVASVAA 83 Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143 AG GF+N+ L P +R IL +++ +G YG + GKG +VN+E+VSANPTGPMHVGHCR Sbjct: 84 AGPGFVNITLKPDVMRGILPAVLNAGEAYGASQAGKGLRVNVEYVSANPTGPMHVGHCRG 143 Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL-----YNNDSDLPE 198 AVVGD LA+LMA +G+ VT+E+YINDAGAQ+ LA + +WRY QAL ++ S L Sbjct: 144 AVVGDALANLMAKAGFAVTKEFYINDAGAQVRALAWAAYWRYLQALGTKMTQDDFSALAP 203 Query: 199 G--YYPGVYLKHVGKELADKYSSEL---------LNFPEEKWLPIVKDYSVQAMMKIIRD 247 G Y G YL VG ELA +Y ++L L PE WL V+ ++V M+ I++ Sbjct: 204 GGLQYQGEYLIPVGMELAAEYGNKLTETDADGSPLPAPEVTWLETVRGFAVTHMLTAIKE 263 Query: 248 DLKALNIQHDIFISEDD-FHRGDPSPIRDI-IDNLARQGYVYEGILPPPKSKTTQKCDMD 305 DL AL + HD+F SE + RG + D I L +QG +YEG+L PPK K + + + Sbjct: 264 DLAALGVHHDVFTSEAEVLRRG----VTDAAISKLEQQGLLYEGVLEPPKGKLPEDWE-E 318 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365 R+QLLFRST GDDVDRPL KSDG+ TYFA D+ Y K RG MI V G+DH GYVK Sbjct: 319 REQLLFRSTQFGDDVDRPLRKSDGTNTYFANDIGYHADKVARGAQMMIDVWGADHGGYVK 378 Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425 R++A A++ + V+LC++V + RDG P+KMSKRAG F+TLR ++DEVG D+VRF Sbjct: 379 RMKAAVKAITGDTVPLEVVLCQIVHILRDGQPVKMSKRAGTFVTLRDLIDEVGRDAVRFT 438 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 ML RK+ ++FD V Q ++NPVFYVQYA+ARCRS+ R A + + D Sbjct: 439 MLTRKSDAQMEFDLDLVVAQQRDNPVFYVQYAHARCRSVLRAAAEAAAYGETDDAALASA 498 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 ES +E+ LI LAE+PR++E A +A+EP+++AFYL D+A FH W+ GR++ L Sbjct: 499 SLESLTSDAEMALIRRLAEWPRMVEAAALAREPHRVAFYLADVAGDFHALWNRGRDDASL 558 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 RF+Q + + T RL LV A A +I SGL ++GVE EM Sbjct: 559 RFLQPDAVEATRARLALVAATAVVIRSGLAVMGVEPVEEM 598 >gi|83593114|ref|YP_426866.1| arginyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170] gi|109895029|sp|Q2RTG6|SYR_RHORT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|83576028|gb|ABC22579.1| arginyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170] Length = 592 Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust. Identities = 257/563 (45%), Positives = 361/563 (64%), Gaps = 11/563 (1%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 R+ +E PR+ AHG ++TNAAM+L++P GL P +AE++V ++ + + AG GFIN Sbjct: 32 RVAVEPPREAAHGDMATNAAMVLAKPAGLAPRAVAEMLVEKLVGVDGIVAAETAGPGFIN 91 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 L L P RK L +++ G +G + +G+G VN+EFVSANPTGPMHVGH R AV GD L Sbjct: 92 LRLDPKIWRKTLKTVLTLGTAFGASTMGRGAAVNVEFVSANPTGPMHVGHGRGAVFGDAL 151 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP-------EGYYPG 203 A+L+ +G+ VTREYY+NDAGAQ+++LA +++ RY+ A+ + D E Y G Sbjct: 152 AALLVKAGWAVTREYYVNDAGAQVDSLARALYARYRVAVGDLDEAAFAAMLAAREIEYGG 211 Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 YL V ++A + E WLP + ++ M+ +I++DL AL + HD+F SE Sbjct: 212 DYLVPVAADIAQADGTRWTTVAESDWLPAFRAIGIERMLALIKEDLAALGVVHDVFTSEQ 271 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323 R + +++ +L + VY G L PPK KT + R Q LFR+T GD+VDRP Sbjct: 272 ALVRA--GRVDEMMTDLESRDLVYVGTLEPPKGKTPDDWE-PRPQTLFRATGFGDEVDRP 328 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383 L KSDGS+TYFA+D+AY K++RGF MI V+G+DH GYVKRL+A AVS +A+++V Sbjct: 329 LKKSDGSWTYFASDIAYHHDKFKRGFLGMINVLGADHGGYVKRLKAAVKAVSNGEAELDV 388 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443 L +LV+L +G P+KMSKRAG FITLR VVDEVG D VRF+ML RKN LDFD+ +V Sbjct: 389 KLVQLVKLLDNGEPVKMSKRAGTFITLREVVDEVGKDVVRFIMLTRKNDAALDFDYARVT 448 Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLIVHL 502 E++++NPVFYVQYA+AR S+ R A FP + E+ ++ L Sbjct: 449 EKTRDNPVFYVQYAHARACSVARHAAQTFPGRDLSAAALAATADLDLLDADEEMAMVRLL 508 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 A +PR++E+A A EP+++AFYL ++A+ FHG W+ G +N LRF+ + ++ RL L Sbjct: 509 AGWPRLVESAAEAHEPHRVAFYLGEVAAAFHGLWNRGNDNAELRFLLPTDEARSLARLAL 568 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 V AVAS+I SGL I GVE EM Sbjct: 569 VQAVASVIASGLEIFGVEPVKEM 591 >gi|5834360|gb|AAD53926.1|AF179611_10 arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4] Length = 580 Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust. Identities = 263/559 (47%), Positives = 361/559 (64%), Gaps = 19/559 (3%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 R+ +E PRD +HG L+ NAAM+L++ P +AE +V + V+SV IAG GFIN Sbjct: 37 RVAVEPPRDPSHGDLAINAAMVLAKAAKTAPRALAEKLVESLSQLEGVESVEIAGPGFIN 96 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + L+ RK L+ I+ G +YGR+ IG+ +VN+E+VSANPTGPMH+GHCR AVVGD L Sbjct: 97 IRLTDDCWRKELTHILEQGQDYGRSDIGQNLRVNVEYVSANPTGPMHMGHCRGAVVGDAL 156 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ASL+ F+GY+VTREYY+NDAG Q+ TLA S + RY++AL + +PEG YPG YL VG Sbjct: 157 ASLLDFAGYKVTREYYVNDAGQQVQTLARSAYMRYREAL-GEEITIPEGLYPGDYLVPVG 215 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K LA+KY LN PE +WL + ++ +V AMM +IRDDL L I HD F SE H+ Sbjct: 216 KLLAEKYGDRYLNAPESEWLALFRETTVAAMMDMIRDDLALLGIHHDKFTSEAALHKA-- 273 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 ++ ID L ++G +Y+G+L PK +T + R L+ R+T DD DRP+ SDGS Sbjct: 274 GIVQKAIDKLEKEGLIYKGVLEAPKGETPEDLVTCRTDLVSRATKFSDDSDRPVQISDGS 333 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTYF ADLAY K D ++ + G+DH+G VKR++A AA+++ K ++V L ++V Sbjct: 334 YTYFGADLAYHARKAATA-DQLVDIWGADHAGTVKRIKAAVAALTQNKVPLDVKLVQMVH 392 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L R G P+KMSKR +F+TL VV EVG D VRF ML RK +DFDF KV E SK+NP Sbjct: 393 LLRGGEPVKMSKRFRNFVTLADVVSEVGRDVVRFSMLTRKADAQMDFDFEKVIEASKDNP 452 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV-IPQESE---FDTSELQLIVHLAEYP 506 VFYVQYA+AR S+ R+ L N+ +P++++ D EL LI A++P Sbjct: 453 VFYVQYAHARVHSLHRR-----------LVSENITLPEKADLNLLDKEELALIQQAAQFP 501 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 R+IE A +A EP+++ FYL+ LA+ FH W+ G +NP RF+ +N T RL L AV Sbjct: 502 RLIEAAAVAHEPHRIVFYLFTLAADFHSLWNKGNDNPDRRFLLPDNPAKTAARLALADAV 561 Query: 567 ASIINSGLNIIGVESPNEM 585 +I +GL ++GV + EM Sbjct: 562 GQVIRNGLGVVGVNASEEM 580 >gi|330993304|ref|ZP_08317240.1| Arginyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1] gi|329759706|gb|EGG76214.1| Arginyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1] Length = 601 Score = 509 bits (1310), Expect = e-142, Method: Compositional matrix adjust. Identities = 268/601 (44%), Positives = 381/601 (63%), Gaps = 23/601 (3%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 LFA + + +++ L+ I + L R+ + RD AHG L+TNAA+++S+ P Sbjct: 5 LFARYLTHVRDALRTI--MPDLPDAALARVEVTPTRDPAHGDLATNAALVISKAARRRPA 62 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 IA +V + P + +AG GF+N++L+P+ + + +++ +G YG + G G K Sbjct: 63 EIAAGLVTALATVPGIARAEVAGPGFVNMHLTPAVWQGVARAVLAAGEGYGTSTAGNGVK 122 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VN+E+VSANPTGPMHVGHCR AVVGD LA+L+A +GY VT+EYYINDAGAQ+ LA + + Sbjct: 123 VNVEYVSANPTGPMHVGHCRGAVVGDVLANLLAKAGYAVTKEYYINDAGAQVIALAWATY 182 Query: 183 WRYQQALYNNDSD------LPEG--YYPGVYLKHVGKELADKYSSELLN---FPEEK--W 229 WRY QAL + S+ +P G Y G YL VG+ LA+++ L P E W Sbjct: 183 WRYLQALGTSVSEAEFAQSVPGGAIQYGGDYLVPVGRALAERHGDALAAPGLRPAEPALW 242 Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 L VK +V MM +IR+DL AL + HD+F SE D R I L +G +YEG Sbjct: 243 LDTVKTEAVDTMMGMIREDLAALGVHHDVFTSEAKI-LADGETDR-AIAALDAKGLIYEG 300 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349 +L PPK K + R Q LFRST GDDVDRPL KSDGS TYFA D+ Y K RG Sbjct: 301 VLEPPKGKLPDDWEA-RPQTLFRSTEFGDDVDRPLRKSDGSNTYFANDIGYHADKIRRGA 359 Query: 350 DNMIYVMGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 D ++ V G+DH GYV R++ AVAA ++ + ++VLLC++VR+ RDG P++MSKRAG F+ Sbjct: 360 DVLVDVWGADHGGYVTRMKAAVAALATDGRPVLDVLLCQIVRIVRDGQPVRMSKRAGTFV 419 Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 TLR ++DEVG D+VRF ML RK ++FD +V QS++NPVFYVQYA+ARCRS+ R A Sbjct: 420 TLRDLIDEVGRDAVRFTMLTRKADAQMEFDLDQVVAQSRDNPVFYVQYAHARCRSVLRAA 479 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDT----SELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 ++ FDL +++ +EL L+ +A++PR++E+A A EP+++AFY Sbjct: 480 AEMVEKGVFDLSTTPASLGDADLSGLTSDAELALLRRMAQWPRMVESAASAHEPHRIAFY 539 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 L +LAS FH W+ GR++ LRF+Q ++ T M+L LV A A+++ SG+ ++GV+ E Sbjct: 540 LNELASDFHALWNRGRDDATLRFLQEHDVATTRMKLALVEATATVLRSGMKVLGVQPVEE 599 Query: 585 M 585 M Sbjct: 600 M 600 >gi|163741411|ref|ZP_02148802.1| arginyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10] gi|161385145|gb|EDQ09523.1| arginyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10] Length = 581 Score = 508 bits (1309), Expect = e-142, Method: Compositional matrix adjust. Identities = 263/586 (44%), Positives = 371/586 (63%), Gaps = 7/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF D S + + L + + + + + + +E PRD AHG ++TNAAM+L++P + Sbjct: 1 MNLFTDIRSLVLDCLTAMVAEGTLPEGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAKM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ + ++ D V S +AG GF+NL L S + +L +++ I++GR+ +G Sbjct: 61 KPRDIADALAGKLAADARVTSAEVAGPGFLNLRLDRSSWQSVLGAVLAEDIKFGRSDLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGP+HVGH R AV GD LASL+ F GY+VTREYYIND G Q++ LA Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFVGYDVTREYYINDGGGQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + + +G YPG YL VG+ L DK +N PE+ WL +++++ Sbjct: 181 SVYLRYLEA-HGQEVAFVDGTYPGDYLVPVGQALKDKVGDAYVNQPEDVWLEEIRNFATD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL +L IQ D F SE + I + +L +G +YEG+L PPK K Sbjct: 240 AMMDLIRADLASLGIQMDKFFSEKSLY--GTGLIESALKSLDDKGLIYEGVLEPPKGKKP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + R+Q LF+ST GDDVDRP+ KSDG++TYFA D+AY K ERGFD +I + G+D Sbjct: 298 DDWE-PREQTLFKSTEHGDDVDRPVKKSDGAWTYFAPDIAYHYDKVERGFDMLIDIFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ + +++ LC+LV+L++DG KMSKRAG F+TLR VVD VG Sbjct: 357 HGGYVKRMKAAVSALSDGRVPLDIKLCQLVKLFKDGQEFKMSKRAGTFVTLRDVVDAVGP 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RFM+L RKN + DFD K EQSK+NPVFYVQYA AR S R+A + + D Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPVFYVQYANARICSTLRKAAE--AGIATDD 474 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 D ++L + LAE+PR++E A EP+++AFYLYDLAS HG + G Sbjct: 475 ATLAAADLTLLQDDAQLTVAKKLAEWPRLVEIAARTNEPHRVAFYLYDLASELHGLYHLG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + N LRFV +N T ++ L AV+ +I++GL I+GV EM Sbjct: 535 KTNEGLRFVNESNPSATHAKMALAKAVSIVISAGLGILGVTPAQEM 580 >gi|296535511|ref|ZP_06897697.1| arginine--tRNA ligase [Roseomonas cervicalis ATCC 49957] gi|296264166|gb|EFH10605.1| arginine--tRNA ligase [Roseomonas cervicalis ATCC 49957] Length = 594 Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust. Identities = 267/572 (46%), Positives = 368/572 (64%), Gaps = 22/572 (3%) Query: 26 KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85 ++ L R+ +E PRD +HG +STNAAM++++ L P +A + A + P V AG Sbjct: 32 EEALARVTVEPPRDASHGDMSTNAAMVVAKIAKLPPPKLAAELAAALAALPSVAEAAPAG 91 Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 GF+NL L+ +L +++++ +G YG + G G +VN+E+VSANPTGPMHVGHCR AV Sbjct: 92 PGFVNLRLAEDFLLGQVATVLRAGEAYGDSQAGGGVRVNVEYVSANPTGPMHVGHCRGAV 151 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD------LPEG 199 VGD LA+L+A +G VT+EYYINDAGAQ+ L + +WRY QAL ++ +P G Sbjct: 152 VGDALANLLAKAGAAVTKEYYINDAGAQVQALGYAAYWRYLQALGTTLTEEAYAEAVPGG 211 Query: 200 Y-YPGVYLKHVGKELADKYSSELL--NFPEEK--WLPIVKDYSVQAMMKIIRDDLKALNI 254 Y G YL VG+ L +K+ L P E WL V++++V AMM+ IR+DL AL + Sbjct: 212 LQYRGDYLVPVGEALKEKFGDSLAPGAVPAEASLWLDTVRNFAVDAMMEAIREDLAALGV 271 Query: 255 QHDIFISEDDFHRGDPSPIRDI-IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313 HD+FISE R + D I L+ +G VYEG+L PPK KT + R Q LF S Sbjct: 272 AHDVFISEAQLVR---DGVADAAIAALSEKGLVYEGVLEPPKGKTPDDWE-PRPQTLFAS 327 Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373 T GDDVDRPL KSDGS TYFA D+ K RG ++ V G+DH GYVKR++A A Sbjct: 328 TKFGDDVDRPLRKSDGSNTYFANDIGNHADKIARGMQQLVQVWGADHGGYVKRMQAATKA 387 Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433 +S+ ++VLLC++V++ + G P++MSKRAG +ITLR ++DEVG D+VRF ML RK+ Sbjct: 388 LSDGAVPLDVLLCQIVKVMKGGEPVRMSKRAGTYITLRDLIDEVGRDAVRFTMLTRKSDA 447 Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493 ++FD +V EQS++NPVFYVQYA+ARCRS+ RQA D + D P S D Sbjct: 448 QMEFDLDRVVEQSRDNPVFYVQYAHARCRSVLRQAGDPAREALAD------APLSSLKDA 501 Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553 +EL LI +A +PR++E A A+EP+++AFYL DLA+ FH W+ GR++ LRF+QA Sbjct: 502 AELALIRRIAAWPRIVEAAAAAREPHRIAFYLGDLAADFHILWNRGRDDATLRFIQAEAP 561 Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + T RL LV A A +I SGL ++GV+ EM Sbjct: 562 EATRARLALVAATAIVIRSGLAVMGVQPVEEM 593 >gi|89053998|ref|YP_509449.1| arginyl-tRNA synthetase [Jannaschia sp. CCS1] gi|109894997|sp|Q28S88|SYR_JANSC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|88863547|gb|ABD54424.1| arginyl-tRNA synthetase [Jannaschia sp. CCS1] Length = 575 Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust. Identities = 264/556 (47%), Positives = 368/556 (66%), Gaps = 15/556 (2%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + +E PRD +HG ++TNAAM+L++P G+ P IAE + A++ D +D+V +AG GF+NL Sbjct: 33 VTVEPPRDASHGDMATNAAMVLAKPAGMKPRDIAEALAAKLADDARIDTVDVAGPGFLNL 92 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 LS R +++ + G YGR+ IG G +VN+E+VSANPTGP+HVGH R AV GD LA Sbjct: 93 RLSGDVWRGVIADALTQGEAYGRSKIGAGKRVNVEYVSANPTGPLHVGHTRGAVFGDALA 152 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 SL+ +GY+VTREYYIND GAQ++ L SV+ RY +A + D +G YPG YL VG+ Sbjct: 153 SLLDVAGYDVTREYYINDGGAQVDVLVRSVYLRYLEA-HGQDVAFEDGTYPGDYLIDVGQ 211 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 L DK ++ E+ WL +++++ + MM +IR DL L ++ D+F SE + Sbjct: 212 ALKDKVGDAFVDKGEQFWLAEIREFATEQMMDLIRKDLALLGVEMDVFYSEKSLY--GTG 269 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 I ID+L +G +YEG L PPK KT + + R+Q LF+ST GDDVDRP++KSDGS+ Sbjct: 270 RIEAAIDDLRGKGLIYEGYLEPPKGKTPEDWE-PREQTLFKSTEHGDDVDRPVMKSDGSW 328 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 TYFA D+AY K RGFD +I V G+DH GYVKR++A +A+S ++V L +LV+L Sbjct: 329 TYFAPDIAYHFDKVSRGFDELIDVFGADHGGYVKRMKAAVSALSGGDVPLDVKLTQLVKL 388 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 R +KMSKRAG F+TL VV+ VG+D RF ML RKN LDFD KV+EQSK+NPV Sbjct: 389 RRGDEELKMSKRAGTFVTLADVVEMVGADVTRFHMLTRKNDAPLDFDVDKVREQSKDNPV 448 Query: 452 FYVQYAYARCRSIFRQAKD--IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 +YVQYA+AR +S+ R+A++ + PD P N+ + D +EL L +AEYPR+I Sbjct: 449 WYVQYAHARIKSVLRKAEEAGMSPD------PANL---NAVNDPAELALAAKIAEYPRLI 499 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 E A EP+++AFYL+DLAS FHG W+ G LRF Q ++ T +L L+ AVA + Sbjct: 500 EIAAKGNEPHRVAFYLFDLASDFHGLWNKGNAETHLRFFQDDDPSATSGKLCLISAVAIV 559 Query: 570 INSGLNIIGVESPNEM 585 I++GL I+GV ++M Sbjct: 560 ISNGLGILGVTPVDQM 575 >gi|259419075|ref|ZP_05742992.1| arginyl-tRNA synthetase [Silicibacter sp. TrichCH4B] gi|259345297|gb|EEW57151.1| arginyl-tRNA synthetase [Silicibacter sp. TrichCH4B] Length = 580 Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust. Identities = 257/586 (43%), Positives = 372/586 (63%), Gaps = 7/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF D + + + L + + + + + + +E PRD AHG ++TNAAM+L++P + Sbjct: 1 MNLFTDIRTLVIDSLAAMTAEGALPEGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAKM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + A++ D + S +AG GF+NL L S + +L + G YGR+ +G+ Sbjct: 61 KPRDIAEALAAKLGQDARITSAEVAGPGFLNLRLDLSVWQSVLGKALHEGEAYGRSDMGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGP+HVGH R AV GD LASL+ ++GY+VTREYYIND GAQ++ LA Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDYAGYDVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY +A + + P+G YPG YLK VG L +K+ + PE+ WL V+ ++ + Sbjct: 181 SAYLRYLEA-HGQSVEFPDGTYPGEYLKDVGAALKEKFGDTFVGQPEDVWLEEVRAFATE 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM +IR+DL L ++ D+F SE + I +++L +G +YEG+L PPK K Sbjct: 240 MMMDLIREDLGLLGVKMDVFYSEKSLY--GTGRIEAALESLDAKGLIYEGVLEPPKGKKP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + R Q LF+ST GDDVDRP+ KSDG++TYFA D+AY K RGFD +I + G+D Sbjct: 298 DDWE-PRVQTLFKSTAHGDDVDRPVKKSDGAWTYFAPDIAYHYDKVSRGFDMLIDIFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ + +++ LC+LV+L++DG KMSKRAG F+TLR VVD VG+ Sbjct: 357 HGGYVKRMKAAVSALSDGQVPLDIKLCQLVKLFKDGQEFKMSKRAGTFVTLRDVVDAVGA 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RFM+L RKN + DFD K EQSK+NPVFYVQYA AR S R+A++ D Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPVFYVQYANARIHSTLRKAREAGIACDDAT 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + Q + ++L + +AE+PR +E A EP+++AF+LYDLAS HG + G Sbjct: 477 LNAADLSQLTH--EAQLSVARKIAEWPRQVEIAARTNEPHRIAFFLYDLASDLHGLYHLG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + LRFV ++ T L L AV+ +I++GL I+GV+ EM Sbjct: 535 KSEESLRFVNESSESATHANLALARAVSIVISAGLGILGVKPAQEM 580 >gi|126739455|ref|ZP_01755148.1| arginyl-tRNA synthetase [Roseobacter sp. SK209-2-6] gi|126719555|gb|EBA16264.1| arginyl-tRNA synthetase [Roseobacter sp. SK209-2-6] Length = 581 Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust. Identities = 261/594 (43%), Positives = 370/594 (62%), Gaps = 23/594 (3%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF D S + + L + + + + + + +E PRD AHG ++TNAAM+L++P + Sbjct: 1 MNLFTDIRSLVIDSLTAMSAEGALPEGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAKM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + ++ D V S +AG GF+NL L+P + ++ +++ +G ++GR+ G Sbjct: 61 KPRDIAEALAGKLAADARVTSAEVAGPGFLNLRLAPVVWQGVVDAVLKAGTDFGRSDQGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGP+HVGH R AV GD LASL+A++GY+VTREYYIND G Q++ LA Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLAYAGYDVTREYYINDGGGQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + + +G YPG YL VG+ L DK L+ PE+ WL V+++S Sbjct: 181 SVYLRYLEA-HGQEIAFADGTYPGDYLVPVGEALKDKVGDAYLDQPEDVWLADVREFSTD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL L I+ D+F SE + I + L +G +Y+G+L PPK K Sbjct: 240 AMMDLIRADLARLGIEMDVFYSEKSLY--GTGRIEAALKELEEKGLIYQGVLEPPKGKKP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + R+Q LF+ST GDDVDR + KSDG++TYFA D+AY K RGFD +I + G+D Sbjct: 298 DDWE-PREQTLFKSTDHGDDVDRAVKKSDGAWTYFAPDIAYHYDKVSRGFDELIDIFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ K +++ LC+LV+L++DG KMSKRAG F+ LR VVD VG Sbjct: 357 HGGYVKRMKAAVSALSDGKVPLDIKLCQLVKLFKDGQEFKMSKRAGTFVMLRDVVDAVGP 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK--------DI 471 D RFM+L RKN + DFD K EQSK+NPVFYVQYA AR S R+A D Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPVFYVQYANARICSTLRRAAAEGIAGDDDT 476 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 D L D ++L ++ L E+PR +E A EP+++AFYLYDLAS Sbjct: 477 LKSADLTLIS----------DPAQLSVVKKLGEWPRQVEIAARTNEPHRIAFYLYDLASE 526 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 HG + G+ N LRFV +++ T L L +V+ +I++GL I+GV+ EM Sbjct: 527 LHGLYHLGKSNEGLRFVNESSQSATHANLALARSVSIVISAGLGILGVKPAQEM 580 >gi|307294518|ref|ZP_07574360.1| arginyl-tRNA synthetase [Sphingobium chlorophenolicum L-1] gi|306878992|gb|EFN10210.1| arginyl-tRNA synthetase [Sphingobium chlorophenolicum L-1] Length = 575 Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust. Identities = 269/588 (45%), Positives = 370/588 (62%), Gaps = 17/588 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGL 59 M L+ F++ L L ++ + + + + +E PRD +HG L+TNAAM+L++P G Sbjct: 1 MSLYNRFTAHLDAVLDALEADGTLPAGLNRKPVTVEPPRDPSHGDLATNAAMVLAKPAGT 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A+ IVA ++ +V+ IAG GFINL L+ + R L++I EYGR+ G+ Sbjct: 61 NPRALAQKIVAGLERLDEVEGASIAGPGFINLRLTDATWRAELAAIHAEAEEYGRSSTGE 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G VN+E+VSANPTGPMH+GHCR AVVGD LA+L+ G++V REYYINDAG Q++ LA Sbjct: 121 GVTVNVEYVSANPTGPMHMGHCRGAVVGDALATLLEHVGHKVIREYYINDAGGQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S RY++AL + +PEG YPG YL VG+ LA +Y + + PE +WL + +V Sbjct: 181 SAHVRYREALSEDVGGIPEGLYPGDYLVPVGQALAAEYGDKYVGAPESEWLASFRTKAVA 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFH-RGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 AMM +IR DL L I HDIF SE + G P L VY+G+L PK +T Sbjct: 241 AMMDMIRSDLALLGIHHDIFSSEAELQAAGKPEAAEKW---LREHDLVYDGVLEAPKGET 297 Query: 299 TQKCDMDRKQL-LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 + D + +L LFRST GDD DRP+ KS+GS+TYF AD+AY K + D +I + G Sbjct: 298 PE--DWEPVELPLFRSTKFGDDQDRPIKKSNGSWTYFGADMAYHYQKAQTA-DQLIDIWG 354 Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 +DH G VKR++A AA++E KA+ +V L ++VRL RDG P+KMSKRAG+F+TL VV EV Sbjct: 355 ADHGGTVKRIQAAVAALTEGKARFDVKLIQMVRLLRDGEPVKMSKRAGNFVTLADVVREV 414 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G D VRF ML RK +DFDF KV E SK+NPVFYVQYA+AR S+ R+A++ DL Sbjct: 415 GKDVVRFTMLTRKADAQMDFDFAKVVEASKDNPVFYVQYAHARISSLGRRAEEAGIDLP- 473 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 P S T EL L+ ++PRV+E A A+EP+++AFYL DLAS FH W+ Sbjct: 474 -------APDLSRLGTDELGLVKLAVQFPRVVEGAASAREPHRIAFYLNDLASAFHSWWN 526 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G +NP+ R + ++ T RL L + II +GL ++GV + EM Sbjct: 527 LGNDNPQARVILTDDPATTSARLFLSRGIGQIIRNGLALMGVAALTEM 574 >gi|126725250|ref|ZP_01741092.1| arginyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150] gi|126704454|gb|EBA03545.1| arginyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150] Length = 593 Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust. Identities = 265/586 (45%), Positives = 380/586 (64%), Gaps = 7/586 (1%) Query: 1 MYLFADFSSRLKNYLKEI-DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFAD + + + L + D + + +E PRD +HG ++TNAAM+L++ Sbjct: 13 MNLFADIRALVIDSLTVMTDEGVLPSGLDFANVTVEPPRDASHGDMATNAAMVLAKAAKS 72 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + A++ D VD +AG GF+NL LS + + ++ + +G ++GR+ +G+ Sbjct: 73 KPRDIAEALAAKLAEDARVDLAEVAGPGFLNLRLSSAIWHNVTAATLANGTDFGRSNMGE 132 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 +VN+E+VSANPTGP+HVGH R AV GD LASL+ F+G++VTREYYIND GAQ++ LA Sbjct: 133 NKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGFDVTREYYINDGGAQVDVLAR 192 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RYQ+A + +G YPG YL VG+ L +K L+ E WL V++YS + Sbjct: 193 SVYLRYQEA-HGQKVAFEDGTYPGDYLIEVGQALKEKVGDAYLDQDESVWLQEVREYSTE 251 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL AL ++ D F SE + I + +L +G +Y+G L PPK K Sbjct: 252 AMMNLIREDLLALGVKMDHFYSEKSLY--GTGQIEAALADLDEKGLIYQGYLEPPKGKLP 309 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LFRST GDDVDRP+ KSDGS+TYFA D+AY K RG+D +I + G+D Sbjct: 310 EDWEA-REQTLFRSTAHGDDVDRPVKKSDGSWTYFAPDIAYHYDKVTRGYDLLIDIFGAD 368 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S +++ L +LV+L ++G P KMSKRAG F+TLR VVD+VG Sbjct: 369 HGGYVKRMKAAVSALSNGTVPLDIKLTQLVKLLKNGEPFKMSKRAGTFVTLRDVVDQVGR 428 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN LDFDF KV EQSK+NPVFYVQYA+AR +S+ R+A D D+ Sbjct: 429 DVTRFVMLTRKNDAPLDFDFDKVVEQSKDNPVFYVQYAHARIKSVMRRATDAGIDVSPAA 488 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + S +EL L LAE+PR++E A + EP+++AFYLY+L+S H HW+ G Sbjct: 489 LAAADMSRASH--DAELGLAKKLAEWPRLVEIAARSNEPHRIAFYLYELSSDLHAHWNKG 546 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ LRF+Q + + T ++ L+ AV+ +I++GL I+GVE EM Sbjct: 547 NDDVSLRFLQEGDSETTQAKIALIFAVSIVISAGLGILGVEPVEEM 592 >gi|254477547|ref|ZP_05090933.1| arginyl-tRNA synthetase [Ruegeria sp. R11] gi|214031790|gb|EEB72625.1| arginyl-tRNA synthetase [Ruegeria sp. R11] Length = 581 Score = 505 bits (1301), Expect = e-141, Method: Compositional matrix adjust. Identities = 261/586 (44%), Positives = 371/586 (63%), Gaps = 7/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF D S + + L + + + + + + +E PRD AHG ++TNAAM+L++P + Sbjct: 1 MNLFTDIRSLVLDCLNAMVAEGTLPEGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAKM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + ++ D V S +AG GF+NL L + +LS+++ G +GR+ +G+ Sbjct: 61 KPRDIAEALATKLAADARVTSAEVAGPGFLNLRLDQGSWQAVLSNVLAEGTNFGRSNMGE 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGP+HVGH R AV GD LASL+ F G++VTREYYIND G Q++ LA Sbjct: 121 GKKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFVGFDVTREYYINDGGGQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + + +G YPG YL VG+ L K + PEE WL +++++ Sbjct: 181 SVYLRYLEA-HGQEVAFVDGTYPGDYLVPVGEALKAKVGDAYVGQPEEVWLEEIRNFATD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL +L ++ D F SE + I + +L +G +YEG+L PPK K Sbjct: 240 AMMDLIREDLASLGVKMDKFFSEKSLY--GTGLIEAALKSLDDKGLIYEGVLEPPKGKKP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + R+Q LF+ST GDDVDRP+ KSDG++TYFA D+AY K ERGFD +I V G+D Sbjct: 298 DDWE-PREQTLFKSTDHGDDVDRPVKKSDGAWTYFAPDIAYHYDKVERGFDMLIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+SE K +++ LC+LV+L++DG KMSKRAG F+TLR VVD VG Sbjct: 357 HGGYVKRMKAAVSALSEGKVPLDIKLCQLVKLFKDGQEFKMSKRAGTFVTLRDVVDAVGP 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RFM+L RKN + DFD K EQSK+NPVFYVQYA AR S R+A++ +D Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPVFYVQYANARICSSLRKAEEAGIAVDDAT 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + D ++L + +AE+PR++E A EP+++AFYLYDLAS HG + G Sbjct: 477 LAAADLSLLD--DDAQLAVAKKIAEWPRLVEIAARTNEPHRVAFYLYDLASELHGLYHLG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + N LRFV ++ T ++ L V+ +I++GL I+GV EM Sbjct: 535 KTNEGLRFVNESSASATHAKMALAKTVSIVISAGLGILGVTPAQEM 580 >gi|254454733|ref|ZP_05068170.1| arginyl-tRNA synthetase [Octadecabacter antarcticus 238] gi|198269139|gb|EDY93409.1| arginyl-tRNA synthetase [Octadecabacter antarcticus 238] Length = 578 Score = 504 bits (1299), Expect = e-140, Method: Compositional matrix adjust. Identities = 266/592 (44%), Positives = 377/592 (63%), Gaps = 22/592 (3%) Query: 1 MYLFADFSSRLKNYLKEIDC--KIKVEKKI---LD--RIVIERPRDCAHGHLSTNAAMIL 53 M LFAD + + IDC + +E + LD + +E PRD +HG ++TNA M+L Sbjct: 1 MNLFADIRATV------IDCLDALTIEGVLPAGLDFANVTVEPPRDASHGDMATNAVMVL 54 Query: 54 SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYG 113 ++P G+ P IA+ + A++ D + S IAG GF+NL L ++S+ V++ ++G Sbjct: 55 AKPSGMKPRDIADALAAKLVADTRITSADIAGPGFLNLALDAGVWAGVVSA-VLTDADFG 113 Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173 ++ +G G K+N+E++SANPTGP+HVGH R AV GD LASL+A++GY+VTREYYIND GAQ Sbjct: 114 KSNLGAGKKMNVEYISANPTGPLHVGHTRGAVFGDALASLLAYAGYDVTREYYINDGGAQ 173 Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233 ++ LA SV+ RY +A + +G YPG YL G++L + + EE WL V Sbjct: 174 VDVLARSVYLRYLEA-HGQAVTFEDGTYPGEYLIQAGQDLKARVGDAYVGQGEEVWLDDV 232 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 +++ AMM +IR+DL +L ++ D+F SE + I I +L +G +Y+G L P Sbjct: 233 REFGTDAMMALIREDLDSLGVKMDVFYSEKSLY--GTGLIEAAIADLKTKGLIYKGTLEP 290 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353 PK K + + R+Q LF+ST GDDVDRP+ KSDG++TYFA D+AY K RGFD +I Sbjct: 291 PKGKLPEDWE-PREQTLFKSTEFGDDVDRPIQKSDGAWTYFAPDIAYHYDKISRGFDALI 349 Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 V G+DH GYVKR++A AA+S+ ++V L +LV+LY+ G P KMSKRAG FI LR + Sbjct: 350 DVFGADHGGYVKRMKAAVAALSDNAVPLDVKLTQLVKLYKKGEPFKMSKRAGTFIMLRDL 409 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 V EVG D RF ML RKN LDFDF KV EQSK+NPVFYVQYA AR S+ R+A + Sbjct: 410 VAEVGPDVTRFHMLTRKNDAPLDFDFDKVTEQSKDNPVFYVQYASARIHSVMRKAVEAGV 469 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 D+ DL ++ +EL + LAE+PR++E A EP+++AFYLYDLAS H Sbjct: 470 DVS-DLAHADL---SLATHPAELAMAAKLAEWPRLVEIAAKGHEPHRIAFYLYDLASELH 525 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G W+ G ++ LRF+Q +N T ++ L+ +V+ +I+ GL I+GV EM Sbjct: 526 GLWNRGSDDASLRFLQVDNIPATQAKIALIKSVSVVISHGLGILGVTPAEEM 577 >gi|85707713|ref|ZP_01038779.1| arginyl-tRNA synthetase [Erythrobacter sp. NAP1] gi|85689247|gb|EAQ29250.1| arginyl-tRNA synthetase [Erythrobacter sp. NAP1] Length = 583 Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust. Identities = 266/592 (44%), Positives = 374/592 (63%), Gaps = 24/592 (4%) Query: 3 LFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 L+A ++ ++ L+ + + E + +E PRD +HG L+TNAAM+L++P +P Sbjct: 7 LYAAYAGTIQTALQALVADGTLPEGTSFANVTLEPPRDPSHGDLATNAAMVLAKPAKTNP 66 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +AE I ++K DP + S IAG GF+NL L PS L +I G EYGR+ +G GT Sbjct: 67 RALAEAIATKLKSDPTIVSAEIAGPGFLNLRLDPSAWLGELETITKLGDEYGRSSMGAGT 126 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 VN+E+VSANPTGPMH+GHCR AVVGD LASL+ +G+EVTREYYINDAG Q++TLA S Sbjct: 127 TVNVEYVSANPTGPMHMGHCRGAVVGDALASLLELAGHEVTREYYINDAGGQVDTLARSA 186 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 RY++AL N ++PEGYYPG YL +G+ LA + + + PEE+WLP + +V+ M Sbjct: 187 HLRYREALGENIGEIPEGYYPGAYLIPIGEYLAQEVGEKYRDAPEEEWLPYFRAEAVEKM 246 Query: 242 MKIIRDDLKALNIQHDIFISEDDFH-RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 M +I+ DL L I HD+F SE H G P L VY+G+L PK K Sbjct: 247 MDLIKSDLALLGIHHDVFASEAALHAAGKPDEAEKW---LREHDLVYDGVLEAPKGKAPP 303 Query: 301 KCDMDRKQL-LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + D + +L LFRST GDD DRP+ KSDG +TYF ADLAY K D +I + G+D Sbjct: 304 E-DWEPVELPLFRSTKFGDDQDRPIKKSDGKWTYFGADLAYHMQKAADA-DELIDIWGAD 361 Query: 360 HSGYVKRLEAVAAAVSEKKAQ---INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 H+G VKR++A AA+SE K + +V L ++V+L R G P+KMSKR+G+FIT+ +V+E Sbjct: 362 HAGTVKRIKAAVAALSEGKGKPTPFDVKLVQMVQLMRGGEPVKMSKRSGNFITIADMVEE 421 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFP 473 VG D VRF ML RK ++FDF KV E SK+NPV+YVQYA+AR +S R+A D + P Sbjct: 422 VGKDVVRFTMLTRKPEAQMEFDFAKVVEASKDNPVWYVQYAHARIQSTIRKAADEEGVTP 481 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 D ++ + E+ LI A++PR +E+A A+EP+++AFYLYDLA+ + Sbjct: 482 STD----------ALNQLGSDEIALIRRAAQFPREVESAAKAREPHRIAFYLYDLATDLN 531 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +S G P RF+ +++ LT RL L A+ ++ +GL ++GVE+ + M Sbjct: 532 SFYSLGNTEPEKRFILKHDKGLTAARLFLASAIGQVLRNGLRVLGVEAVDRM 583 >gi|255263999|ref|ZP_05343341.1| arginyl-tRNA synthetase [Thalassiobium sp. R2A62] gi|255106334|gb|EET49008.1| arginyl-tRNA synthetase [Thalassiobium sp. R2A62] Length = 579 Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust. Identities = 255/557 (45%), Positives = 361/557 (64%), Gaps = 8/557 (1%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 +D + +E PRD AHG ++TNAAM+L++P + P IAE + +++ + + +AG GF Sbjct: 30 MDNVTVEPPRDAAHGDMATNAAMVLAKPAKMKPRDIAEALATKLQDENRITVAEVAGPGF 89 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 +NL L+ + ++ G YG++++G GT+VN+E+VSANPTGP+HVGH R AV GD Sbjct: 90 LNLRLADWVWQALVKKTYDGG--YGQSIMGTGTRVNVEYVSANPTGPLHVGHVRGAVFGD 147 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 LASL+A++GY+VTREYYIND GAQ++ LA SVF RY +A + +G YPG YL Sbjct: 148 ALASLLAYAGYDVTREYYINDGGAQVDVLARSVFLRYLEA-NGQEVAFEDGTYPGDYLIP 206 Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 +G+ L + + L+ E WL V++++ AMM +IR DL AL I+ D+F SE + Sbjct: 207 LGQALFEMHGDALVGKDEADWLEDVREFATDAMMNLIRSDLAALGIEMDVFYSEKSLY-- 264 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 I I L +G +Y G L PPK K + + R+Q LF+ST GDDVDRP+ KSD Sbjct: 265 GTGQIEKSIAELDAKGLIYRGTLEPPKGKKPEDWE-PREQTLFKSTEHGDDVDRPIQKSD 323 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 G++TYFA D+AY K R FD +I V G+DH GYVKR++A +A+S+ + ++V L +L Sbjct: 324 GAWTYFAPDIAYHYDKISREFDELIDVFGADHGGYVKRMKAAVSALSDGQVPLDVKLTQL 383 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V+L ++G P KMSKRAG FITLR VVD+VG D RF+ML RK LDFDF KV EQSK+ Sbjct: 384 VKLTKNGEPFKMSKRAGTFITLRDVVDQVGPDVTRFVMLTRKQDAPLDFDFDKVTEQSKD 443 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 NPVFYVQYA+AR +S+ R+A + D+ D + + + EL L +AE+PR+ Sbjct: 444 NPVFYVQYAHARVQSVLRKAVEANIDVSDDAL--SSVDLAGMTNEGELALAKKIAEWPRL 501 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 +E A EP+++AFYLY+LA FH W+ G + LRF Q + + T ++ L+ A A Sbjct: 502 VEIAARTNEPHRIAFYLYELAGEFHALWNRGNTDESLRFFQEGDSETTQAKIALIRAAAV 561 Query: 569 IINSGLNIIGVESPNEM 585 +I++GL I+GV NEM Sbjct: 562 VISAGLGILGVTPANEM 578 >gi|332187136|ref|ZP_08388876.1| arginyl-tRNA synthetase [Sphingomonas sp. S17] gi|332012836|gb|EGI54901.1| arginyl-tRNA synthetase [Sphingomonas sp. S17] Length = 574 Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust. Identities = 263/590 (44%), Positives = 380/590 (64%), Gaps = 22/590 (3%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDR--IVIERPRDCAHGHLSTNAAMILSRPLG 58 M L+ F++ + L + + LDR + +E PRD +HG L+TNAAM+L++P G Sbjct: 1 MTLYTRFAAHIDAALDTLVAAGTLPGG-LDRRNVTVELPRDASHGDLATNAAMVLAKPAG 59 Query: 59 LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +P +AE I + +V+SV +AG GF+N+ L+ + R L++I +G +YGR+ G Sbjct: 60 TNPRALAEAIAVELGKLDEVESVSVAGPGFLNMRLTKAAWRDELAAIPQAGGDYGRSARG 119 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 +G VNIE+VSANPTGPMH+GHCR AVVGD LA+L+ F+G++V REYY+NDAG Q++ LA Sbjct: 120 EGVTVNIEYVSANPTGPMHMGHCRGAVVGDALATLLEFAGHKVIREYYVNDAGGQVDVLA 179 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 S RY++AL ++PEG YPG YLK VG+ LA ++ + ++ PE +WL + + +V Sbjct: 180 RSAHLRYREAL-GETIEIPEGLYPGEYLKPVGEALAAEFGNAYVDAPESEWLVLFRTRAV 238 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFH-RGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 AMM +IR+DL L I HD+F SE + G P L +G VY+G+L PK + Sbjct: 239 AAMMAMIREDLALLGIHHDLFSSEAELQAAGKPEAAE---AELRSRGLVYDGVLEAPKGE 295 Query: 298 TTQKCDMDRKQL-LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 T + D + +L LFRS+ GDD DRP+ KS+G++TYF ADLAY K + D +I + Sbjct: 296 TPE--DWEPVELPLFRSSQFGDDQDRPIKKSNGAWTYFGADLAYHYQKAQTA-DQLIDIW 352 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G+DH+G VKR+ A A++ K + +V L ++VRL R G P+KMSKRAG+F+TL VV E Sbjct: 353 GADHAGTVKRIVAAVEALTGGKTKFDVKLVQMVRLLRGGEPVKMSKRAGNFVTLADVVRE 412 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI-FPDL 475 VG D VRF ML R++ +DFDF KV E SK+NPVFYVQYA+AR S+ R+A + Sbjct: 413 VGKDVVRFTMLTRRSDAQMDFDFAKVVEASKDNPVFYVQYAHARIASLKRRAAEAGIEGG 472 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 D DL S D ++ L+ A++PR++E A +A+EP+++AFYLYDLA+ FH Sbjct: 473 DADL---------SLLDAEDIALVKLAAQFPRIVETAAVAREPHRIAFYLYDLAAAFHAA 523 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W+ G + P RF+ A + +T RL L + +I +GL ++GVE+ +EM Sbjct: 524 WNVGNDRPDRRFLIAEDAAVTRARLFLSEGIGQVIRNGLALMGVEAVSEM 573 >gi|254436491|ref|ZP_05049985.1| arginyl-tRNA synthetase [Octadecabacter antarcticus 307] gi|198251937|gb|EDY76251.1| arginyl-tRNA synthetase [Octadecabacter antarcticus 307] Length = 578 Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust. Identities = 268/593 (45%), Positives = 375/593 (63%), Gaps = 24/593 (4%) Query: 1 MYLFADFSSRLKNYLKEIDC-KIKVEKKILD------RIVIERPRDCAHGHLSTNAAMIL 53 M LFAD + + IDC + +L + +E PRD HG ++TNAAM+L Sbjct: 1 MNLFADIRAAV------IDCLNVLTNDGVLPAGLDFANVTVEPPRDATHGDMATNAAMVL 54 Query: 54 SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYG 113 ++P GL P IAE + A++ D + S IAG GF+NL L ++ +++ G ++G Sbjct: 55 AKPAGLKPRDIAEALAAKLLADRRIMSADIAGPGFLNLALDAGVWAGVVRAVLTDG-DFG 113 Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173 ++ +G G K+N+E+VSANPTGP+HVGH R AV GD LASL+A++GY+VTREYYIND G Q Sbjct: 114 KSNLGTGLKINVEYVSANPTGPLHVGHTRGAVFGDALASLLAYAGYDVTREYYINDGGGQ 173 Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233 ++ LA SV+ RY +A + +G YPG YL G++L K + E+ WL V Sbjct: 174 VDVLARSVYLRYLEA-HGQAVTFEDGTYPGEYLIKAGQDLKTKVGDAYVGQGEDVWLDDV 232 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 +D+ QAMM +IR+DL L ++ D+F SE + I I +L +G +Y+G L P Sbjct: 233 RDFGTQAMMALIREDLDMLGVKMDVFYSEKSLY--GTGRIEAAIADLKSKGLIYKGTLEP 290 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353 PK K + + R+Q LF+ST GDDVDRP+ KSDG++TYFA D+AY K RGFD +I Sbjct: 291 PKGKLPEDWE-PREQTLFKSTDFGDDVDRPIQKSDGAWTYFAPDIAYHFDKVSRGFDALI 349 Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 V G+DH GYVKR++A AA+S+ +++ L +LV+LY++G P KMSKRAG FI LR + Sbjct: 350 DVFGADHGGYVKRMKAAVAALSDNAVPLDIKLTQLVKLYKNGEPFKMSKRAGTFIMLRDL 409 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VDEVG D RF ML RKN LDFDF KV EQSK+NPVFYVQYA AR S+ R+A + Sbjct: 410 VDEVGPDVTRFHMLTRKNDAPLDFDFDKVTEQSKDNPVFYVQYASARIHSVLRKAAEAGV 469 Query: 474 DL-DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 D+ D + ++ +EL + LAE+PR++E A EP+++AFYLYDLAS Sbjct: 470 DVGDLAIADLSLATH-----PAELAMAAKLAEWPRLVEIAAKGHEPHRIAFYLYDLASEL 524 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 HG W+ G ++ LRF+Q +N T ++ L+ AV+ +I+ GL+I+GV EM Sbjct: 525 HGLWNRGNDDASLRFLQVDNIPATQAKIALIKAVSVVISHGLSILGVTPAEEM 577 >gi|85373141|ref|YP_457203.1| arginyl-tRNA synthetase [Erythrobacter litoralis HTCC2594] gi|84786224|gb|ABC62406.1| arginyl-tRNA synthetase [Erythrobacter litoralis HTCC2594] Length = 581 Score = 502 bits (1292), Expect = e-140, Method: Compositional matrix adjust. Identities = 267/591 (45%), Positives = 374/591 (63%), Gaps = 24/591 (4%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 + A F++++ L ++ + + + R + +E PRD +HG L+TNAAM+L++ +P Sbjct: 7 IHAAFAAKVDAVLSALEAEGTLPAGVERRNVTVEPPRDPSHGDLATNAAMVLAKQAATNP 66 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +AE IV ++ DPD+ IAG GFINL L+ L +I G YGR+ +G+G Sbjct: 67 RALAEKIVEHLERDPDITETAIAGPGFINLRLADRAWLGELEAIAALGEGYGRSQMGEGK 126 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 +VN+E+VSANPTGPMH+GHCR AVVGD LA+L+ ++G+EVTREYY+NDAG Q++TLA S Sbjct: 127 RVNVEYVSANPTGPMHMGHCRGAVVGDALAALLEYAGHEVTREYYVNDAGGQVDTLARSA 186 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 RY++AL + +P G YPG YLK VG+ LA + + PE++WLPI + +V+ M Sbjct: 187 HLRYREALGEDIGAIPGGLYPGDYLKPVGEYLAQELGDRFKDAPEDEWLPIFRAEAVEKM 246 Query: 242 MKIIRDDLKALNIQHDIFISEDDFH-RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 M +IR DL L I HD+F SE G P L G VY+G+L PK K + Sbjct: 247 MDVIRADLALLGIHHDLFSSEAALQAAGKPEQAEAW---LREHGLVYDGVLEQPKGKVIE 303 Query: 301 KCDMDRKQL-LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 D + +L LFRST GDD DRP+ KSDG +TYF ADLAY K E D +I + G+D Sbjct: 304 --DWEPVELPLFRSTKFGDDQDRPIRKSDGKWTYFGADLAYHMQKAEEA-DALIDIWGAD 360 Query: 360 HSGYVKRLEAVAAAVSEKKAQ---INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 H+G VKR++A AA+SE + + +V L ++V+L R G P+KMSKR+G+FIT+ +V+E Sbjct: 361 HAGTVKRIKAAVAALSEGQGKPIPFDVKLVQMVQLMRAGEPVKMSKRSGNFITIADMVEE 420 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK--DIFPD 474 VG D VRF ML RK +DFDF KV E SK+NPVFYVQYA+AR S R+A+ I P Sbjct: 421 VGKDVVRFTMLTRKPEAQMDFDFAKVVEASKDNPVFYVQYAHARIHSTLRKARAEGIEPS 480 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 + I Q E EL LI A++PR++E A A+EP+++AF+LYDLAS FH Sbjct: 481 TE-------AIAQLGE---EELGLIKQAAQFPRIVEAAAAAREPHRIAFFLYDLASAFHS 530 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ G +NP R + A + L+ RL L+ + +I +GL ++GVE+ EM Sbjct: 531 FYNLGNDNPSKRVILAQDPALSAARLFLIDTIGQVIRNGLTLLGVEAVEEM 581 >gi|296114981|ref|ZP_06833625.1| arginyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769] gi|295978443|gb|EFG85177.1| arginyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769] Length = 629 Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust. Identities = 265/602 (44%), Positives = 380/602 (63%), Gaps = 26/602 (4%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 LF + S ++ L ++ + I+ R+ + RD +HG L+TNAA+++++ P Sbjct: 34 LFVRYLSHVREALGQVVPHLP--PAIVARVEVTPTRDPSHGDLATNAALLVAKVARRKPA 91 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 IA + ++ P + + AG GF+NL L+P+ L+++ + ++ +G YG +G G K Sbjct: 92 DIAADLARVLESVPGITAAQAAGPGFVNLKLAPAVLQEVAAQVLRAGDSYGDGHVGDGVK 151 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VN+E+VSANPTGPMHVGHCR AVVGD LA+L++ +GY VT+EYYINDAGAQ+ LA + + Sbjct: 152 VNVEYVSANPTGPMHVGHCRGAVVGDALANLLSKAGYGVTKEYYINDAGAQVTALAWAAY 211 Query: 183 WRYQQALYNNDSD------LPEG-YYPGVYLKHVGKELADKYSSELLN-----FPEEKWL 230 WRY QA+ + +P G Y G YL VG+ELA ++ + L P + W+ Sbjct: 212 WRYLQAIGTTLTQDEFAALVPGGIQYGGDYLVPVGEELAARHGTSLAADGGRPAPVDVWM 271 Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290 V+ +V MM +IR+DL+AL + HD+F SE D R ID L +G +YEG+ Sbjct: 272 QTVRTETVARMMAMIREDLEALGVHHDVFTSEAKI-LADGETNR-AIDRLTAKGLIYEGV 329 Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350 L PPK K + + R Q LFRST GDDVDRPL KSDGS TYFA D+ Y K RG D Sbjct: 330 LEPPKGKLPEDWEA-RPQTLFRSTEFGDDVDRPLRKSDGSNTYFANDIGYHADKIARGAD 388 Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 +I V G+DH GYV R++A AA+ + K +++VLLC++VR+ RDG P++MSKRAG F+T Sbjct: 389 VLIDVWGADHGGYVTRMKAAVAALGQDGKPELDVLLCQIVRIVRDGQPVRMSKRAGTFVT 448 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR--- 466 LR ++DEVG D+VRF ML RK ++FD +V QS++NPVFYVQYA+ARC S+ R Sbjct: 449 LRDLIDEVGRDAVRFTMLTRKADAQMEFDLDQVVAQSRDNPVFYVQYAHARCCSVLRGAA 508 Query: 467 ---QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 QA + DL + + +EL L+ +A++PRV+E+A IA EP+++AF Sbjct: 509 ELAQAGRLAGDLSAEAL--AALDLSGLSSDAELALLGRMAQWPRVVESAAIAHEPHRIAF 566 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 YL +LA+ FH W+ GR++ LRF+ ++ +LT +L LV A A +I SGL ++GVE Sbjct: 567 YLQELAADFHALWNRGRDDATLRFLHEDDAQLTRTKLALVEATARVIRSGLRVLGVEPVK 626 Query: 584 EM 585 EM Sbjct: 627 EM 628 >gi|149186244|ref|ZP_01864558.1| arginyl-tRNA synthetase [Erythrobacter sp. SD-21] gi|148830275|gb|EDL48712.1| arginyl-tRNA synthetase [Erythrobacter sp. SD-21] Length = 579 Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust. Identities = 266/593 (44%), Positives = 371/593 (62%), Gaps = 30/593 (5%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDR--IVIERPRDCAHGHLSTNAAMILSRPLGLD 60 L A F++++ ++ + + + DR + +E PRD +HG L+TNAAM+L++ + Sbjct: 7 LHAGFAAKIDAVFNALEMEGSLPPET-DRSNVTVEPPRDPSHGDLATNAAMVLAKKAKTN 65 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE IV + +PD+ IAG GFINL LS + L +I G +YGR+ IG G Sbjct: 66 PRALAEKIVEHLTREPDITEASIAGPGFINLCLSEQAWLRELEAIAALGADYGRSQIGGG 125 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 VNIE+VSANPTGPMH+GHCR AVVGD LA L+ FSG+ V REYY+NDAG Q++ LA S Sbjct: 126 KTVNIEYVSANPTGPMHMGHCRGAVVGDALAGLLEFSGHTVIREYYVNDAGGQVDVLARS 185 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 RY++AL + +PEG YPG YLK VG+ LA ++ + + PE WLP+ ++ +V A Sbjct: 186 AHLRYREALGEDIGAIPEGLYPGDYLKPVGERLAQEFGAAYKDAPESDWLPLFRERAVAA 245 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFH-RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM +IR+DL L I HD+F SE G P L G+VY+G+L PK K Sbjct: 246 MMDMIREDLALLGIHHDLFSSEAKLQAAGKPEEAEAW---LREHGFVYDGVLEAPKGKAP 302 Query: 300 QKCDMDRKQL-LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + D + +L LFRST GDD DRP+ KS+G++TYF ADLAY K E D +I + G+ Sbjct: 303 PE-DWEPVELPLFRSTEFGDDQDRPIKKSNGAWTYFGADLAYHFQKAENA-DALIDIWGA 360 Query: 359 DHSGYVKRLEAVAAAVSEKKAQ---INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 DH+G VKR++A AA+++ + +V L ++V L R+G P+KMSKRAG F+TL VV+ Sbjct: 361 DHAGTVKRIKAAVAALTKGAGRDVPFDVKLVQMVNLVRNGEPVKMSKRAGTFVTLADVVN 420 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 EVG D VRF ML RK ++FDF KV E SK+NPVFY+QYA+AR RS R+A Sbjct: 421 EVGKDVVRFTMLTRKPEAQMEFDFAKVVEASKDNPVFYLQYAHARIRSTLRKA------- 473 Query: 476 DFDLFPRNVIPQESEFD---TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 V P ++ D EL L+ A++PRV+E A A+EP+++AF+L DLA+ F Sbjct: 474 -------GVEPSDAHLDRLGADELALVREAAQFPRVVEAAAKAREPHRIAFFLGDLAAAF 526 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H W+ G ++P R +Q ++ +LT RL + V +I +GL I+GVE+ EM Sbjct: 527 HSFWNAGNDDPAKRIIQEDDAELTAARLFVAAQVGQVIRNGLGILGVEAVEEM 579 >gi|254464840|ref|ZP_05078251.1| arginyl-tRNA synthetase [Rhodobacterales bacterium Y4I] gi|206685748|gb|EDZ46230.1| arginyl-tRNA synthetase [Rhodobacterales bacterium Y4I] Length = 581 Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust. Identities = 268/586 (45%), Positives = 378/586 (64%), Gaps = 7/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF D S + + L + + + + + + +E PRD AHG ++TNAAM+L++P + Sbjct: 1 MNLFTDIRSLVIDSLTAMTGEGALPEGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAKM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + A++ D + S +AG GF+NL+L+P + +L S++ +G ++GR+ IG Sbjct: 61 KPRDIAEALAAKLAADERITSAEVAGPGFLNLWLAPGIWQGVLKSVLDAGTDFGRSGIGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGP+HVGH R AV GD LA+L+A++GY+VTREYYIND G Q++ LA Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALAALLAYAGYDVTREYYINDGGGQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + D +G YPG YL VG+ L DK L+ PEE WL V++++ Sbjct: 181 SVYLRYLEA-HGQDIAFADGTYPGDYLVPVGQALKDKAGDAYLDQPEEVWLAEVREFATD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL L I+ D+F SE + I + L +G +Y+G+L PPK K Sbjct: 240 AMMALIREDLAQLGIEMDVFYSEKSLY--GTGKIEAALKALESKGLIYQGVLEPPKGKKP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + R+Q LF+ST GDDVDR + KSDG++TYFA D+AY K ERGFD +I V G+D Sbjct: 298 DDWE-PREQTLFKSTDHGDDVDRAVKKSDGTWTYFAPDIAYHYDKVERGFDELIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ K +++ LC+LV+LY+DG KMSKRAG F+TLR VVD VG Sbjct: 357 HGGYVKRMKAAVSALSDGKVPLDIKLCQLVKLYKDGQEFKMSKRAGTFVTLRDVVDAVGP 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RFM+L RKN + DFD K EQSK+NPVFYVQYA AR S R+A++ + D Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPVFYVQYANARICSTLRKAEE--QGIAADD 474 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 N D ++L + LAE+PR++E A EP+++AFYLYDLAS HG + G Sbjct: 475 AALNAADLSLVSDPAQLAVAKKLAEWPRLVEVAARTHEPHRVAFYLYDLASELHGLYHMG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + LRFV +++ T L L AV+ +I++GL I+GV+ EM Sbjct: 535 KSQEGLRFVNESSQSATHANLALAKAVSVVISAGLGILGVKPAEEM 580 >gi|240142278|ref|YP_002966788.1| arginyl-tRNA synthetase [Methylobacterium extorquens AM1] gi|240012222|gb|ACS43447.1| arginyl-tRNA synthetase [Methylobacterium extorquens AM1] Length = 601 Score = 495 bits (1275), Expect = e-138, Method: Compositional matrix adjust. Identities = 263/559 (47%), Positives = 361/559 (64%), Gaps = 6/559 (1%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 +RIV+E RD AHG L+T AM L + G+ P IA + + DP V S +AG GF+ Sbjct: 32 ERIVVEPTRDPAHGDLATGVAMTLGKAFGMPPSAIAAALADELAADPGVVSAAVAGPGFV 91 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N+ L+P + S V SG YGR + +EFVSANPTGPMHVGH R AVVGD Sbjct: 92 NVALAPEAFGDAVRSAVSSGAAYGRRPPDGTPPMVVEFVSANPTGPMHVGHGRGAVVGDA 151 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 LASL+AF+G V+REYY+NDAGAQ++ LA SVF RY +AL L EG YPG YL V Sbjct: 152 LASLLAFAGRTVSREYYVNDAGAQVDVLARSVFVRYLEALGEKTDALGEGLYPGEYLVPV 211 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG- 268 G+ LAD + PE +WLP +D +V+AMM++IR+DL+ L ++HD F SE G Sbjct: 212 GQALADGHGRAHAGRPEAEWLPPFRDAAVRAMMELIREDLRLLGVRHDSFFSERSLTAGP 271 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 D + + I +L + V+ G LPPPK K + DR+Q LFR+T+ GD+VDRPLLK+D Sbjct: 272 DGDLVAETIRDLRDRDLVHVGTLPPPKGKPQDDWE-DREQTLFRATLFGDEVDRPLLKAD 330 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 GSYTYFAAD+AY + K+ RG ++I V+G+DH GYV+R+ A A + +A L ++ Sbjct: 331 GSYTYFAADIAYHRSKWLRGGRHLIDVLGADHGGYVRRMAAAVGAATRGEATFEAKLVQM 390 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V L RDG P++MSKR+G F+TLR VV+EVG+D+ RF ML+R++ ++FD +V Q+KE Sbjct: 391 VSLVRDGQPVRMSKRSGSFVTLREVVEEVGADAFRFTMLFRRSDAQMEFDLAQVVLQAKE 450 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF--DTSELQLIVHLAEYP 506 NPV+YVQY +ARCRS RQA + P DL P + + D E +LI +A++P Sbjct: 451 NPVYYVQYGHARCRSALRQAAEAMPSA--DLSPGALAQADLGLLRDPGERELIRLVADWP 508 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 R + A A EP+++AF+L++ AS H HW+ G +P LRF+ N +T RL L AV Sbjct: 509 RQVVLAARAGEPHRIAFFLHETASRLHAHWTRGNADPALRFIVPGNVSVTRARLALAAAV 568 Query: 567 ASIINSGLNIIGVESPNEM 585 A+++ +GL I+GV +P+ M Sbjct: 569 AAVLAAGLGILGVGAPDRM 587 >gi|42520278|ref|NP_966193.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila melanogaster] gi|81652693|sp|Q73HY6|SYR_WOLPM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|42410016|gb|AAS14127.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila melanogaster] Length = 568 Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust. Identities = 264/586 (45%), Positives = 372/586 (63%), Gaps = 18/586 (3%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +F SS + + L E+ + + + +IE P + HG + TN AM+L++ + Sbjct: 1 MNIFKQISSLIFSKLNELKQRGVISTSAAN-FIIEPPSNRVHGDIYTNVAMVLAKHEKKN 59 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P+ IAE++ ++ +V V IAG GFIN++L IL I E+G IG Sbjct: 60 PIEIAEVLAKEFELFDEVAKVEIAGSGFINMHLKIEVWHGILKQINELKTEFGTLDIGNN 119 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +N+EFVSANPTGP+H+GH R AV GD LA+L+ GY+VT+EYYINDAGAQI+TL S Sbjct: 120 QAINVEFVSANPTGPLHIGHARGAVFGDVLANLLKKVGYKVTKEYYINDAGAQIDTLIRS 179 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V+ RY++AL S + +G YPG YLK +G LA KY +ELL E++ +++DY++ + Sbjct: 180 VYLRYKEALGEKIS-IEKGLYPGEYLKPIGTGLAKKYGAELL---EKQDNQVIRDYTLSS 235 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 +++II++D+ L + HD+F SE + + I + I L+ +G VYEG L PK K ++ Sbjct: 236 ILEIIKEDMNLLGVNHDVFTSEYELQK--SGKIEESIKILSDKGLVYEGYLEKPKGKESE 293 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 RK++LFRST GDDVDR L K DGS+TYFA+D+AY K RGF+NMI +GSDH Sbjct: 294 NW-TSRKEMLFRSTKFGDDVDRALKKEDGSWTYFASDIAYHFDKISRGFNNMIVELGSDH 352 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GYVKRL+AV +A+S+ +A+I V L +V + +G P+KMSKR+G+F+T R VV+EVG D Sbjct: 353 GGYVKRLKAVVSALSDDQAKIEVKLHNIVNFFENGKPVKMSKRSGNFLTARDVVEEVGRD 412 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 RF+ML RKN +LDFDF KVKEQSK+NP+FYVQYA+AR S+ R A P D L Sbjct: 413 ITRFIMLTRKNDMVLDFDFAKVKEQSKDNPIFYVQYAHARAHSLMRNAPKELPTADPSLL 472 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 EL LI LA++P V+E A EP+++ FYL ++A FH W +G+ Sbjct: 473 RTG----------GELFLIKTLAKWPDVVEIAARLCEPHRITFYLLEVAEAFHVLWGYGK 522 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586 + +RF+ +N LT R+ LV A+A +I SGL+I +E EMS Sbjct: 523 SDLNMRFILEDNLNLTAARMFLVQALAHVIASGLSIFNIEPLEEMS 568 >gi|103486626|ref|YP_616187.1| arginyl-tRNA synthetase [Sphingopyxis alaskensis RB2256] gi|98976703|gb|ABF52854.1| arginyl-tRNA synthetase [Sphingopyxis alaskensis RB2256] Length = 575 Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust. Identities = 260/564 (46%), Positives = 363/564 (64%), Gaps = 24/564 (4%) Query: 29 LDR--IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK 86 LDR + +E PRD AHG ++TNAAM+L++ G++P +A+L+ + +V +AG Sbjct: 28 LDRSAVSVEPPRDAAHGDIATNAAMVLAKSAGMNPRALADLLAVELGALDEVVEAGVAGP 87 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GFINL L+ R+ L+ I +YGR+ +G+G +VN+E+VSANPTGPMHVGHCR AVV Sbjct: 88 GFINLRLADDSWREELALIHDLRGDYGRSTMGQGRRVNVEYVSANPTGPMHVGHCRGAVV 147 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206 GD LA+L+ ++G+EV REYY+NDAGAQ++ LA SV RY++AL +PEG YPG YL Sbjct: 148 GDALAALLEYAGHEVIREYYVNDAGAQVDVLARSVHMRYREALGEEVGAIPEGLYPGDYL 207 Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 VG++LA ++ PE WL + + +V AMM +IR DL L I HDIF SE + Sbjct: 208 IPVGEKLAAEHGDRFAAAPESAWLALFRAEAVGAMMDMIRADLAKLGIHHDIFSSEAELQ 267 Query: 267 -RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL-LFRSTMVGDDVDRPL 324 G P+ + L QG VY+GIL PK +T + D + +L LFRST GDD DRP+ Sbjct: 268 AAGKPAAAEKL---LREQGLVYDGILEAPKGETPE--DWEPVELPLFRSTQFGDDQDRPI 322 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 KSDGS+TYF ADLAY K E D +I + G+DH+G VKR++A AA++ K + +V Sbjct: 323 RKSDGSWTYFGADLAYHFQKSETA-DELIDIWGADHAGTVKRIKAAVAALTGGKTRFDVK 381 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L ++VRL ++G P KMSKRAG+F+TL VVDEVG D+VRF ML RK +DFDF +V E Sbjct: 382 LVQMVRLLKNGEPFKMSKRAGNFVTLADVVDEVGKDAVRFTMLTRKADAQMDFDFARVVE 441 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501 S++NPV+Y+QYA AR + R+A D + P P +EL L+ Sbjct: 442 ASRDNPVWYLQYANARISRLRRKAADAGIVLP-----------APAPERLRANELALVKL 490 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 LA++PR++E A A+EP+++AFYL D+A+ FH ++ G ++ R V N+ +LT RL Sbjct: 491 LAQFPRIVEAAAFAREPHRIAFYLADVAAAFHAWYNLGNDDSAARIVLDNDPELTATRLY 550 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 L + II +GL ++GVE+ EM Sbjct: 551 LADGIGQIIRNGLQLMGVEALEEM 574 >gi|126734650|ref|ZP_01750396.1| arginyl-tRNA synthetase [Roseobacter sp. CCS2] gi|126715205|gb|EBA12070.1| arginyl-tRNA synthetase [Roseobacter sp. CCS2] Length = 579 Score = 492 bits (1266), Expect = e-137, Method: Compositional matrix adjust. Identities = 264/586 (45%), Positives = 375/586 (63%), Gaps = 9/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGL 59 M LFAD +R+ + L ++ + + + V +E PRD +HG ++TNAAM+L++P + Sbjct: 1 MNLFADMRARVLDCLDQMVAEGTLPADLATAAVSVEPPRDASHGDMATNAAMVLAKPAKM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P IA+ + A++ DP + V +AG GF+N+ L P + ++ + +S YG++ +G+ Sbjct: 61 NPRVIADALAAKLLADPQIAVVEVAGPGFLNMRLVPEVWQGVVKA-ALSDPAYGQSNLGQ 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G K+ +E+VSANPTGP+HVGH R AV GD LA L+ ++G++VT+EYYIND GAQ++ LA Sbjct: 120 GQKMMVEYVSANPTGPLHVGHTRGAVFGDALARLLDYAGFDVTKEYYINDGGAQVDVLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + + P+G YPG YLK VGK L K ++ E+ WL +++++ + Sbjct: 180 SVYLRYLEA-HGQEVAFPDGTYPGDYLKPVGKALKAKVGDAYVDKGEQYWLEEIREFATE 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL L + D F SE + I I L +G +Y G L PPK K Sbjct: 239 AMMDLIRADLAQLGVVMDNFYSEKSLY--GTGLIEKAIAELDEKGLIYRGTLEPPKGKMP 296 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP+ KSDGS+TYFA D+AY K +RGFD +I V G+D Sbjct: 297 EDWE-PREQTLFKSTAHGDDVDRPVQKSDGSWTYFAPDIAYHYDKVQRGFDQLIDVFGAD 355 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ K ++V L +LV+LY++G P KMSKRAG F+TLR VVD+VG+ Sbjct: 356 HGGYVKRMKAAVSALSDGKVPLDVKLTQLVKLYKNGEPFKMSKRAGTFVTLRDVVDQVGA 415 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 + RF ML RKN LDFDF KV EQSK+NPVFYV YAYAR S +A D L Sbjct: 416 NVTRFHMLTRKNDAPLDFDFDKVLEQSKDNPVFYVNYAYARVNSAVGKAGAFTDVSDVTL 475 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 ++ E +EL +I LAE+PR++E A EP+++AFYLYDLAS FH + G Sbjct: 476 ADVDLSGLTHE---AELAVIRKLAEWPRLVEIAARGHEPHRIAFYLYDLASDFHALYHQG 532 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + LRFVQ + + T ++ L+ AVA +I GL I+GV EM Sbjct: 533 NADEALRFVQEGDSETTQAKIALIRAVAIVILHGLGILGVTPAEEM 578 >gi|89068216|ref|ZP_01155626.1| arginyl-tRNA synthetase [Oceanicola granulosus HTCC2516] gi|89046133|gb|EAR52191.1| arginyl-tRNA synthetase [Oceanicola granulosus HTCC2516] Length = 580 Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust. Identities = 262/586 (44%), Positives = 373/586 (63%), Gaps = 8/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFAD + + + L + + + + +E PRD AHG ++TNAAM+L++P G+ Sbjct: 1 MNLFADIRALVVDRLAALAADGTIPDGLDTANVAVEPPRDPAHGDMATNAAMVLAKPAGM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ + AR+ DP + +AG GF+N+ L+ + ++ V+ YGR+ +G Sbjct: 61 KPRDIADALAARLADDPRIALAEVAGPGFLNIRLADGVWQDLVRQ-VLRDDSYGRSDMGA 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+EFVS NPTGPMH+GH R A GD LASL+ ++G+EVTREYYIND GAQ++ LA Sbjct: 120 GEKVNVEFVSVNPTGPMHLGHVRNAAFGDALASLLDYAGHEVTREYYINDGGAQVDVLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + + +G YPG YL VG+ L + ++ E+ WL V+++S Sbjct: 180 SVYLRYLEA-HGREVRFEDGTYPGDYLVAVGEALKAEVGDAYVDQNEDVWLKHVREFSTD 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM++I+DDL AL + D + SE + I I++L +G +Y+G L PPK K Sbjct: 239 RMMQVIKDDLAALGVVMDNYFSEKSLY--GTGKIEGAIESLRDKGLIYKGTLEPPKGKVP 296 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LFRST GDDVDRP++KSDG++TYFA D+AY K ERGF +I V+G+D Sbjct: 297 EDWE-PREQTLFRSTAHGDDVDRPIMKSDGTWTYFAPDIAYHHDKLERGFTQLIDVLGAD 355 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ + ++V L +LV+LY++G P KMSKRAG F+TL VVD VG Sbjct: 356 HGGYVKRMKAAVSAMSDGQVPLDVKLIQLVKLYKNGEPFKMSKRAGTFVTLADVVDMVGP 415 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF ML RKN LDFDF KV EQSK+NPVFYVQYA+AR +S+ R+A + +D + Sbjct: 416 DVTRFHMLTRKNDAPLDFDFDKVTEQSKDNPVFYVQYAHARVQSVLRKAAE--EGIDTET 473 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + SEL L LAE+PR++E A EP+++AFYLY+LAS H W+ G Sbjct: 474 ATLAEVDLSGLTHESELALAKKLAEWPRLVEIAARTHEPHRVAFYLYELASELHALWNKG 533 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 E+ LRF+Q + T ++ L A A +I++GL I+GV +EM Sbjct: 534 NEDHSLRFLQEGDAAATQAKIALPRAAAIVISAGLGILGVTPVDEM 579 >gi|148259959|ref|YP_001234086.1| arginyl-tRNA synthetase [Acidiphilium cryptum JF-5] gi|146401640|gb|ABQ30167.1| arginyl-tRNA synthetase [Acidiphilium cryptum JF-5] Length = 596 Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust. Identities = 259/576 (44%), Positives = 365/576 (63%), Gaps = 18/576 (3%) Query: 24 VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83 ++ ++ RI + R+ AHG ++TNAA+I ++PLG P IA + A + PD+ Sbjct: 24 LDAEVQARIEVSPTREAAHGDMATNAALIAAKPLGRPPREIATALAAALSALPDIAKAEP 83 Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143 AG GF+NL L+ +++I+ +G +G + +G+G +VN+E+VSANPTGP+ VGHCR Sbjct: 84 AGPGFVNLTLADPVWHAEIAAILRAGEAFGASAMGQGRRVNVEYVSANPTGPLTVGHCRG 143 Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD------LP 197 AVVGD LASL+A +GY+VTREYYINDAGAQ+ LA SV+WRY QAL ++ P Sbjct: 144 AVVGDALASLLAKAGYDVTREYYINDAGAQVTALAWSVYWRYLQALGTQLTEQDFAAATP 203 Query: 198 EGY-YPGVYLKHVGKELADKYSSELLN-----FPEEKWLPIVKDYSVQAMMKIIRDDLKA 251 G YPG YL V + L + L P E WL V+ +++++MM +IR+DL A Sbjct: 204 TGLQYPGDYLIPVAEALVAAHGDALAGPGLSIAPAEAWLDTVRRHAIESMMALIREDLAA 263 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 LN++ D+F SE + I L Q +YEG+L PPK KT + + R+Q LF Sbjct: 264 LNVRQDVFTSEAALIAAGGVERAEAI--LRGQDLLYEGVLEPPKGKTPEDWE-PREQTLF 320 Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE-AV 370 R+T GDDVDRP+ KSDGS TYF D+A K RGFD MI V G+DH GYVKR++ AV Sbjct: 321 RATGFGDDVDRPVRKSDGSNTYFFNDIANHADKMARGFDTMIDVWGADHGGYVKRMQAAV 380 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430 A + + A ++++LC++VR+ +DG P++MSKRAG +I LR ++D VG D VRF+ML RK Sbjct: 381 KALAAGRDASLDIVLCQIVRVMKDGTPMRMSKRAGTYIELRDLIDAVGPDVVRFIMLMRK 440 Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNVIPQES 489 + ++FD Q++ENPVFYVQYA+ARCRS+ R A ++ P+L D S Sbjct: 441 SDAQMEFDLDAAVAQTRENPVFYVQYAHARCRSVLRAAAEM-PELGDTADAALAEAALAS 499 Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549 EL L+ LA +PR++E+A A+EP+++ F+LYDLA FH W+ GR + LRF+Q Sbjct: 500 LTAPEELALVRRLAAWPRLVESAAQAREPHRIGFFLYDLAGDFHALWNAGRADATLRFIQ 559 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A+ + + RL LV A A +I SGL ++GV EM Sbjct: 560 ADAVEASRARLALVAATAVVIRSGLAVMGVAPVEEM 595 >gi|326388873|ref|ZP_08210455.1| arginyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370] gi|326206473|gb|EGD57308.1| arginyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370] Length = 589 Score = 489 bits (1258), Expect = e-136, Method: Compositional matrix adjust. Identities = 264/591 (44%), Positives = 358/591 (60%), Gaps = 24/591 (4%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 LFA+F++ + L ++ + + + E PRD AHG L+TNAAM+L++P G +P Sbjct: 15 LFAEFAAVIDAALNALETAGTLPGGLARGAVTTEPPRDPAHGDLATNAAMVLAKPAGTNP 74 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +A +VA ++ DP V + IAG GFINL L P L I G +YGR+ +G G+ Sbjct: 75 RALATALVAELEKDPRVTAAEIAGPGFINLRLVPGAWLDELGLISALGADYGRSTVGGGS 134 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 VN+E+VSANPTGPMH+GHCR AVVGD LASL+ F+G++V REYYINDAG Q++ LA SV Sbjct: 135 IVNVEYVSANPTGPMHMGHCRGAVVGDALASLLDFAGHKVVREYYINDAGGQVDVLARSV 194 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 RY++AL + +PEG YPG YL VG+ LA ++ PE WL + + +V AM Sbjct: 195 HLRYREALGQDVGAIPEGLYPGDYLVPVGQALAAEFGDRYAAAPEADWLVLFRTRAVAAM 254 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 M +IR DL L I HD+F SE + L VY+G L PK K Sbjct: 255 MDMIRADLALLGIHHDVFSSEAELQA--AGKPAAAEAWLREHDLVYDGQLEAPKGKVAD- 311 Query: 302 CDMDRKQL-LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 D + +L LFRST GDD DRP+ KSDGS+TYF ADLAY K E D ++ + G+DH Sbjct: 312 -DWEPVELPLFRSTRFGDDQDRPIRKSDGSWTYFGADLAYHFQKAETA-DALVDIWGADH 369 Query: 361 SGYVKRLEAVAAAVSEKKAQ---INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 +G VKR++A AA++ + + + L ++V+L RDG P+KMSKRAG F+TL VV EV Sbjct: 370 AGTVKRIKAAVAALTGAQGKPKPFEIKLVQMVQLLRDGQPVKMSKRAGTFVTLADVVREV 429 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G D VRF ML RK +DFDF KV E SK+NPVFYVQY +AR S R+A Sbjct: 430 GKDVVRFTMLTRKPDAQMDFDFAKVVEASKDNPVFYVQYCHARVCSTLRKAAG------- 482 Query: 478 DLFPRNVIPQESE---FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 P +E EL LI A++PR++E A A+EP+++AF+LYDLA+ FH Sbjct: 483 ----EGFAPNAAELALLGDEELALIRLAAQFPRIVEGAAAAREPHRIAFFLYDLAAGFHA 538 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +W+ G + P R++ A+N LT RL L V ++ +GL I+GV + E+ Sbjct: 539 YWNLGNDRPDKRYIVADNPALTGARLFLAAQVGQVVRNGLAILGVTAAEEL 589 >gi|326403086|ref|YP_004283167.1| arginyl-tRNA synthetase [Acidiphilium multivorum AIU301] gi|325049947|dbj|BAJ80285.1| arginyl-tRNA synthetase [Acidiphilium multivorum AIU301] Length = 596 Score = 488 bits (1257), Expect = e-136, Method: Compositional matrix adjust. Identities = 259/576 (44%), Positives = 366/576 (63%), Gaps = 18/576 (3%) Query: 24 VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83 ++ ++ RI + R+ AHG ++TNAA+I ++PLG P IA + A + PD+ Sbjct: 24 LDAEVQARIEVSPTREAAHGDMATNAALIAAKPLGRPPREIATALAAALSALPDIAKAEP 83 Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143 AG GF+NL L+ +++I+ +G +G + +G+G +VN+E+VSANPTGP+ VGHCR Sbjct: 84 AGPGFVNLTLTDPVWHAEIAAILRAGEAFGASAMGQGRRVNVEYVSANPTGPLTVGHCRG 143 Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL------YNNDSDLP 197 AVVGD LASL+A +GY+VTREYYINDAGAQ+ LA SV+WRY QAL ++ + P Sbjct: 144 AVVGDALASLLAKAGYDVTREYYINDAGAQVTALAWSVYWRYLQALGTQLTEHDFAAATP 203 Query: 198 EGY-YPGVYLKHVGKELADKYSSELLN-----FPEEKWLPIVKDYSVQAMMKIIRDDLKA 251 G YPG YL V + L + L P E WL V+ +++++MM +IR+DL A Sbjct: 204 TGLQYPGDYLIPVAEALVAAHGDALAGPGLSIAPAEAWLDTVRRHAIESMMALIREDLAA 263 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 LN++ D+F SE + I L Q +YEG+L PPK KT + + R+Q LF Sbjct: 264 LNVRQDVFTSEAALIAAGGVERAEAI--LRGQDLLYEGVLEPPKGKTPEDWE-PREQTLF 320 Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE-AV 370 R+T GDDVDRP+ KSDGS TYF D+A K RGFD MI V G+DH GYVKR++ AV Sbjct: 321 RATGFGDDVDRPVRKSDGSNTYFFNDIANHADKMARGFDTMIDVWGADHGGYVKRMQAAV 380 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430 A + + A ++++LC++VR+ +DG P++MSKRAG +I LR ++D VG D VRF+ML RK Sbjct: 381 KALAAGRDATLDIVLCQIVRVMKDGTPMRMSKRAGTYIELRDLIDAVGPDVVRFIMLMRK 440 Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNVIPQES 489 + ++FD Q++ENPVFYVQYA+ARCRS+ R A ++ P+L D S Sbjct: 441 SDAQMEFDLDAAVAQTRENPVFYVQYAHARCRSVLRAAAEM-PELGDTVDAALAEAALAS 499 Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549 EL L+ LA +PR++E+A A+EP+++ F+LYDLA FH W+ GR + LRF+Q Sbjct: 500 LTAPEELALVRRLAAWPRLVESAAQAREPHRIGFFLYDLAGDFHALWNAGRADATLRFIQ 559 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A+ + + RL LV A A +I SGL ++GV EM Sbjct: 560 ADAVEASRARLALVAATAVVIRSGLAVMGVAPVEEM 595 >gi|162148009|ref|YP_001602470.1| arginyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|161786586|emb|CAP56168.1| Arginyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] Length = 597 Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust. Identities = 267/605 (44%), Positives = 371/605 (61%), Gaps = 35/605 (5%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 LF + S +++ L+ I + E + R+ + RD AHG ++TNAA++ ++ P Sbjct: 5 LFVRYLSHVRDALRRIVPDLPDE--VAARVELTPTRDPAHGDMATNAALLAAKIARRRPA 62 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 IA + A + P V AG GF+N+ L + LR I+ +++ +G YG +G+G + Sbjct: 63 EIAADLAAALAGVPGVAKAEPAGPGFVNVTLDAAVLRSIVPAVLGAGESYGDATLGQGVR 122 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VN+E+VSANPTGPMHVGHCR AVVGD LA+L+A +GY VT+EYYINDAGAQ+ LA + + Sbjct: 123 VNVEYVSANPTGPMHVGHCRGAVVGDALANLLAKAGYGVTKEYYINDAGAQVIALAWATY 182 Query: 183 WRYQQALYNNDSD------LPEG-YYPGVYLKHVGKELADKYSSELLN-----FPEEKWL 230 WRY Q + +P G Y G YL VG+ LA+ + + L E WL Sbjct: 183 WRYLQVIGTTMGQEEFAALVPGGIQYGGDYLVPVGQALAEAHGTALAEPGAQPAAPEHWL 242 Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-IIDNLARQGYVYEG 289 P VK + V MM +IR DL AL ++HD+F SE I D I L QG +YEG Sbjct: 243 PTVKSFVVAQMMAMIRQDLDALGVRHDVFTSEAKIL---ADGITDRAIARLDAQGLLYEG 299 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349 +L PPK K + + R Q LFRST GDDVDRPL KSDGS TYFA D+ Y K RG Sbjct: 300 VLEPPKGKLPEDWEA-RPQTLFRSTAFGDDVDRPLRKSDGSNTYFANDIGYHDDKILRGA 358 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI--NVLLCELVRLYRDGMPIKMSKRAGDF 407 D +I V G+DH GYV R++A A+ E + +VLLC++VR+ RDG P++MSKRAG F Sbjct: 359 DLLIDVWGADHGGYVTRMKAAVKALGEDGGTVDFDVLLCQIVRIVRDGQPVRMSKRAGTF 418 Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467 +TLR ++DEVG D+VRF ML RK ++FD +V Q+++NPVFYVQYA+ARCRS+ R Sbjct: 419 VTLRDLIDEVGRDAVRFTMLTRKADAQMEFDLDQVVAQTRDNPVFYVQYAHARCRSVLRA 478 Query: 468 AKDIFPDLDFDLFPRNVIP---QESEFDT----SELQLIVHLAEYPRVIENATIAQEPYK 520 A+++ L R+V P ++ D +EL L+ +A++PR +E A A EP++ Sbjct: 479 AQEM-------LGARDVAPATLAQAALDGIESDAELALLRRIAQWPRTVEGAAQAHEPHR 531 Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 +AFYL +LA FH W+ GR++ LRF+Q ++ T +L LV A A++I SGL ++GV Sbjct: 532 IAFYLGELAGDFHTLWNRGRDDATLRFLQEDDLAATRAKLALVEATATVIRSGLAVLGVT 591 Query: 581 SPNEM 585 EM Sbjct: 592 PVEEM 596 >gi|209542625|ref|YP_002274854.1| arginyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|209530302|gb|ACI50239.1| arginyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] Length = 597 Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust. Identities = 262/598 (43%), Positives = 365/598 (61%), Gaps = 21/598 (3%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 LF + S +++ L+ I + E + R+ + RD AHG ++TNAA++ ++ P Sbjct: 5 LFVRYLSHVRDALRRIVPDLPDE--VAARVELTPTRDPAHGDMATNAALLAAKIARRRPA 62 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 IA + A + P V AG GF+N+ L + LR I+ +++ +G YG +G+G + Sbjct: 63 EIAADLAAALAGVPGVAKAEPAGPGFVNVTLDAAVLRSIVPAVLGAGESYGDAALGQGVR 122 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VN+E+VSANPTGPMHVGHCR AVVGD LA+L+A +GY VT+EYYINDAGAQ+ LA + + Sbjct: 123 VNVEYVSANPTGPMHVGHCRGAVVGDALANLLAKAGYGVTKEYYINDAGAQVIALAWATY 182 Query: 183 WRYQQALYNNDSD------LPEG-YYPGVYLKHVGKELADKYSSELLN-----FPEEKWL 230 WRY Q + +P G Y G YL VG+ LA+ + + L E WL Sbjct: 183 WRYLQVIGTTMGQEEFAALVPGGIQYGGDYLVPVGRALAEAHGTALAEPGAQPAAPEHWL 242 Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-IIDNLARQGYVYEG 289 P VK + V MM +IR DL AL ++HD+F SE I D I L QG +YEG Sbjct: 243 PTVKSFVVAQMMAMIRQDLDALGVRHDVFTSEAKIL---ADGITDRAIARLDAQGLLYEG 299 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349 +L PPK K + + R Q LFRST GDDVDRPL KSDGS TYFA D+ Y K RG Sbjct: 300 VLEPPKGKLPEDWEA-RPQTLFRSTAFGDDVDRPLRKSDGSNTYFANDIGYHDDKIRRGA 358 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI--NVLLCELVRLYRDGMPIKMSKRAGDF 407 D +I V G+DH GYV R++A A+ + + +VLLC++VR+ RDG P++MSKRAG F Sbjct: 359 DLLIDVWGADHGGYVTRMKAAVKALGKDGGTVDFDVLLCQIVRIVRDGQPVRMSKRAGTF 418 Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467 +TLR ++DEVG D+VRF ML RK ++FD +V Q+++NPVFYVQYA+ARCRS+ R Sbjct: 419 VTLRDLIDEVGRDAVRFTMLTRKADAQMEFDLDQVVAQTRDNPVFYVQYAHARCRSVLRA 478 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 A+++ D + +EL L+ +A++PR +E A A EP+++AFYL + Sbjct: 479 AQEMLGAQDVAPATLAQAALDGIESDAELALLRRIAQWPRTVEGAAQAHEPHRIAFYLGE 538 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA FH W+ GR++ LRF+Q ++ T +L LV A A++I SGL ++GV EM Sbjct: 539 LAGDFHTLWNRGRDDATLRFLQEDDLAATRAKLALVEATATVIRSGLAVLGVTPVEEM 596 >gi|225630185|ref|YP_002726976.1| arginyl-tRNA synthetase [Wolbachia sp. wRi] gi|225592166|gb|ACN95185.1| arginyl-tRNA synthetase [Wolbachia sp. wRi] Length = 568 Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust. Identities = 262/586 (44%), Positives = 369/586 (62%), Gaps = 18/586 (3%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +F SS + + L E+ + + + IV E P + AHG + TN AM+L++ + Sbjct: 1 MNIFKRASSLILSKLNELKQRGIINTDTTNFIV-EPPSNRAHGDIYTNVAMVLAKHEKKN 59 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P+ IAE++ ++ +V V IAG GFIN++L IL I E+G IG Sbjct: 60 PIEIAEVLAKEFELFDEVAKVEIAGPGFINIHLKIKVWHGILKQINELKTEFGTLDIGNN 119 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +N+EFVSANPTGP+H+GH R AV GD LA+L+ GY+VT+EYYINDAGAQI+TL S Sbjct: 120 QAINVEFVSANPTGPLHIGHARGAVFGDVLANLLKKVGYKVTKEYYINDAGAQIDTLIKS 179 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V+ RY++AL S + +G YPG YLK +G+ LA KY E L + + I+++Y++ Sbjct: 180 VYLRYKEALGEKIS-IEKGLYPGEYLKPIGEGLAKKYGKEFLKKQDNQ---IIREYTLSF 235 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 ++++I++D+ L + HD+F SE + + I + I L+ +G VYEG L PK K ++ Sbjct: 236 ILELIKEDMNLLGVNHDVFTSEYELQK--SGKIEESIKILSDKGLVYEGYLEKPKGKESE 293 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 RK++LFRST GDDVDR L K GS+TYFA+D+AY K RGF+NMI +GSDH Sbjct: 294 NW-TSRKEMLFRSTKFGDDVDRALKKDGGSWTYFASDIAYHFDKISRGFNNMIVELGSDH 352 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GYVKRL+AV +A+S+ +A+I V L +V + +G P+KMSKR+G+F+T R VV+EVG D Sbjct: 353 GGYVKRLKAVVSALSDDQAKIEVKLHNIVNFFENGKPVKMSKRSGNFLTARDVVEEVGRD 412 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 RF+ML RKN +LDFDF KVKEQSK+NP+FYVQYA+AR S+ R A P D L Sbjct: 413 ITRFIMLTRKNDMVLDFDFAKVKEQSKDNPIFYVQYAHARAHSLMRNAPKELPTADPSLL 472 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 EL LI LA++P V+E A EP+++ FYL ++A FH W +G+ Sbjct: 473 RTG----------GELFLIKTLAKWPDVVEIAARLCEPHRITFYLLEVAEAFHVLWGYGK 522 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586 + +RF+ +N LT R+ LV A+A +I SGL+I +E EMS Sbjct: 523 SDLNMRFILEDNLNLTAARMFLVQALAHVIASGLSIFNIEPLKEMS 568 >gi|218662749|ref|ZP_03518679.1| arginyl-tRNA synthetase [Rhizobium etli IE4771] Length = 401 Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust. Identities = 229/403 (56%), Positives = 307/403 (76%), Gaps = 4/403 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58 M LF DF +R+K L++ID ++ ++ LD RI +E PRD +HG ++TNAAM+L++PLG Sbjct: 1 MNLFTDFEARIKTALEQIDL-VREKRSELDFGRITVEPPRDASHGDVATNAAMVLAKPLG 59 Query: 59 LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +P +A++I+A++K D DV V +AG GFIN+ L+ Y +++L+S++ SGI+YGR+ +G Sbjct: 60 SNPRALADIIIAKLKEDADVADVSVAGPGFINIRLAVGYWQRLLASMIASGIDYGRSTLG 119 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 +G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ A Sbjct: 120 EGRKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVFA 179 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 RY++AL ++P G YPG YL VG+ LA Y L N PEE+W+PIVKD ++ Sbjct: 180 PLGLLRYREALGERIGEIPSGLYPGDYLVPVGQSLAADYGVRLHNMPEEQWMPIVKDRTI 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 AMM +IR+DL ALN+ HDIF SE H + IR I++L +GYVY+G LPPPK + Sbjct: 240 SAMMVMIREDLAALNVHHDIFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQL 299 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+ Sbjct: 300 PEDWE-DREQTLFRSTEVGDDMDRPLIKSDGSYTYFAADVAYFKNKFDRGFDEMIYVLGA 358 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401 DH GYVKRLEAVA VS+ KA++ VLLC+LV+LYR+G P+KMS Sbjct: 359 DHGGYVKRLEAVARGVSDGKAKLTVLLCQLVKLYRNGEPVKMS 401 >gi|58584465|ref|YP_198038.1| arginyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|75498018|sp|Q5GT78|SYR_WOLTR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|58418781|gb|AAW70796.1| Arginyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 565 Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust. Identities = 257/585 (43%), Positives = 368/585 (62%), Gaps = 21/585 (3%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +F SS + L ++D K+K + ++E P + AHG + TN AM+L++ Sbjct: 1 MNIFKRISSLI---LSKLD-KLKQGVSSVTNFIVEPPSNRAHGDIYTNIAMVLAKHEKKK 56 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P+ IAE++ + ++ V IAG GFIN++L IL I E+G IG Sbjct: 57 PVEIAEVLAKEFALFDEIARVEIAGPGFINMHLKIEVWHGILEQINELKTEFGTLNIGNN 116 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +N+EFVSANPTGP+H+GH R AV GD L +L+ GY VT+EYYINDAGAQI+TL S Sbjct: 117 QAINVEFVSANPTGPLHIGHARGAVFGDVLTNLLKKVGYRVTKEYYINDAGAQIDTLVRS 176 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V+ RY++AL S + +G YPG YLK +G+ELA KY ELL + + ++++Y++ + Sbjct: 177 VYLRYKEALGEKIS-IEKGLYPGEYLKPIGEELAKKYGRELLEKQDNR---VIREYTLSS 232 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 ++++I++ + L + HD+F SE + + I I L+ +G VYEG L PKSK ++ Sbjct: 233 ILELIKEGMNLLGVSHDVFTSEYELQKS--GKIEKSIKLLSDKGLVYEGYLEKPKSKESE 290 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 RK++LFRST GDDVDR L K DGS+TYFA+D+AY K RGF+NMI +GSDH Sbjct: 291 NW-TSRKEMLFRSTEFGDDVDRALKKEDGSWTYFASDIAYHFDKISRGFNNMIVALGSDH 349 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY+KRL+AV +A+S+ +A+I V L +V + +G P+KMSKR+G+F+T+R VV+EVG D Sbjct: 350 GGYIKRLKAVISALSDNQAKIEVKLHNVVNFFENGKPVKMSKRSGNFLTVRDVVEEVGRD 409 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 RF+ML RKN +LDFDF KVKEQSK+NP+FYVQYA+ R S+ R A P + L Sbjct: 410 ITRFIMLTRKNDMVLDFDFTKVKEQSKDNPIFYVQYAHVRAHSLMRNAPKELPKANPSLL 469 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 N EL LI LA++P V+E A EP+++ FYL ++A FH W +G+ Sbjct: 470 KTN----------GELFLIKTLAKWPDVVETAARLCEPHRITFYLLEVAEAFHILWGYGK 519 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +RF+ +N LT R+ LV A+ +I SGL++ +E EM Sbjct: 520 SDLNMRFILEDNPNLTAARMFLVQALVHVIASGLSMFNIEPLEEM 564 >gi|190571604|ref|YP_001975962.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019007|ref|ZP_03334814.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|238065093|sp|B3CNF3|SYR_WOLPP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|190357876|emb|CAQ55335.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995116|gb|EEB55757.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 566 Score = 479 bits (1233), Expect = e-133, Method: Compositional matrix adjust. Identities = 263/585 (44%), Positives = 367/585 (62%), Gaps = 20/585 (3%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +F SS + + L E+ + V + ++E P + AHG + TN AM+L++ + Sbjct: 1 MNIFKQISSLISSKLNELKQR-GVINTSAENFIVEPPSNRAHGDIYTNVAMVLAKHEKKN 59 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P+ IA ++ K +V V IA GFIN++L IL I E+G IG Sbjct: 60 PIEIAGILAREFKPFDEVAEVEIASPGFINMHLKIEVWHGILKQINELKTEFGTLNIGNN 119 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 VN+EFVSANPTGP+H+GH R AV GD LA+L+ GY VT+EYYINDAGAQI+TL S Sbjct: 120 QAVNVEFVSANPTGPLHIGHARGAVFGDVLANLLKKVGYNVTKEYYINDAGAQIDTLIRS 179 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V+ RY++AL S + +G YPG YLK +G+ LA KY EL E+ I+++Y++ + Sbjct: 180 VYLRYKEALGEKIS-IEKGLYPGEYLKPIGEGLAKKYGKEL---RAEEDNQIIREYTLSS 235 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 ++++I++D+ L + HD+F SE + RG I + I L+ +G VYEG L PK K ++ Sbjct: 236 ILELIKEDMSLLGVNHDVFTSEYEL-RG---KIEESIKILSDKGLVYEGYLEKPKGKESE 291 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 RK++LFRST GDDVDR L K DGS+TYFA+D+AY K RGF+NMI +GSDH Sbjct: 292 NW-TSRKEMLFRSTKFGDDVDRALKKEDGSWTYFASDIAYHFDKISRGFNNMIVELGSDH 350 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GYVKRL+AV +A+S+ +A+I V L +V + + P+KMSKR+G+F+T R VV+EVG D Sbjct: 351 GGYVKRLKAVVSALSDDQAKIEVKLHNIVNFFENEKPVKMSKRSGNFLTARDVVEEVGRD 410 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 RF+ML RKN +LDFDF KVKEQSK+NP+FYVQYA+AR S+ R A P D L Sbjct: 411 ITRFIMLTRKNDMVLDFDFAKVKEQSKDNPIFYVQYAHARAHSLMRNAPKELPTADPSLL 470 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 + EL LI LA++P V+E A EP+++ FYL ++A FH W +G+ Sbjct: 471 KTD----------GELFLIKILAKWPDVVEIAARLYEPHRITFYLLEVAEAFHVLWGYGK 520 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +RF+ +N LT R+ LV A+A +I SGL+I +E EM Sbjct: 521 SDLNMRFILEDNLNLTAARMFLVQALAHVIASGLSIFNIEPLKEM 565 >gi|103485609|ref|YP_615170.1| arginyl-tRNA synthetase [Sphingopyxis alaskensis RB2256] gi|98975686|gb|ABF51837.1| arginyl-tRNA synthetase [Sphingopyxis alaskensis RB2256] Length = 580 Score = 479 bits (1232), Expect = e-133, Method: Compositional matrix adjust. Identities = 262/584 (44%), Positives = 359/584 (61%), Gaps = 20/584 (3%) Query: 9 SRLKNYLKEIDCKIKVEKKI---LDR--IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 +R+ ++L + ++V + LDR + +ERP D AHG LSTNAAM+L++ G P Sbjct: 7 ARILDHLARVIGDLQVAGDVPAGLDRAGLTVERPHDPAHGDLSTNAAMVLAKLTGTHPRQ 66 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +AE + R+ + DV V +AG GF+N+ L+ + L+ I YG + +G G V Sbjct: 67 LAEKLAGRLAMLEDVADVAVAGPGFVNIRLTDQAWQNELAVIADQKDRYGMSPVGAGKTV 126 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 NIEFVSANPTGPMH+GHCR AVVGD LA+L+AF+G+ V REYYINDAG Q++ LA S Sbjct: 127 NIEFVSANPTGPMHMGHCRGAVVGDALANLLAFTGHRVIREYYINDAGGQVDILARSAHQ 186 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 RY++AL + ++ EG YPG YLK VG+ LA + + PE WL I + +V AMM+ Sbjct: 187 RYREALGESLGEIAEGLYPGDYLKPVGEALAADFGGRYADAPETDWLAIFRARTVAAMME 246 Query: 244 IIRDDLKALNIQHDIFISEDDF-HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 IR+DL L I HD F SE D G P D L + VY+G+L PPK + ++ Sbjct: 247 TIREDLALLGISHDRFASEADLVAAGKPD---DAEAWLRERDLVYDGVLEPPKGEVSK-- 301 Query: 303 DMDRKQL-LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 D + L LFRST GDD DRP+ K DGS+TYF DLAY K R D +I + G+DH+ Sbjct: 302 DWEPIALPLFRSTKFGDDQDRPIRKPDGSWTYFGVDLAYHFEK-ARDADELIDIWGADHA 360 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 G V R+ A A A++E + + +V L ++VRL R G P+KMSKRAG+F+TL V+ EVG D Sbjct: 361 GTVMRIVAAAEALTEGRKRFDVKLVQIVRLLRAGEPVKMSKRAGNFVTLADVIREVGKDV 420 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 VRFMML RK +DFDF V E SK+NPVFYVQYA+AR S+ +A + +L Sbjct: 421 VRFMMLTRKAEASMDFDFATVVEASKDNPVFYVQYAHARICSLASRAAEAGIEL------ 474 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 P + D L L+ AE+PR++E A A+EP+++AF+L LA+ FH W+ G Sbjct: 475 -GDPPDLALLDGPSLTLVKRAAEFPRIVEAAAAAREPHRIAFFLEGLAAEFHALWNTGNA 533 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +P RF N ++ RL L A+ +I +GL ++GVE +EM Sbjct: 534 DPTRRFAYPENLPVSRARLFLAAAIGQVIRNGLALMGVEPTHEM 577 >gi|58699209|ref|ZP_00374017.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila ananassae] gi|58534275|gb|EAL58466.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila ananassae] Length = 568 Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust. Identities = 259/586 (44%), Positives = 365/586 (62%), Gaps = 18/586 (3%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +F SS + + L E+ + + + IV E P + AHG + TN AM+L++ + Sbjct: 1 MNIFKRASSLILSKLNELKQRGIINTDTTNFIV-EPPSNRAHGDIYTNVAMVLAKHEKKN 59 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P+ IAE++ ++ +V V IAG GFIN++L IL I E+G IG Sbjct: 60 PIEIAEVLAKEFELFDEVAKVEIAGPGFINIHLKIKVWHGILKQINELKTEFGTLDIGNN 119 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +N+EFVSANPTGP+H+GH R AV GD LA+L+ GY+VT+EYYINDAGAQI+TL S Sbjct: 120 QAINVEFVSANPTGPLHIGHARGAVFGDVLANLLKKVGYKVTKEYYINDAGAQIDTLIKS 179 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V+ RY++AL S + +G YPG YLK +G+ LA KY E L + + I+++Y++ Sbjct: 180 VYLRYKEALGEKIS-IEKGLYPGEYLKPIGEGLAKKYGKEFLKKQDNQ---IIREYTLSF 235 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 ++++I++D+ L + HD+F SE + + I + I L+ +G VYEG L PK K ++ Sbjct: 236 ILELIKEDMNLLGVNHDVFTSEYELQK--SGKIEESIKILSDKGLVYEGYLEKPKGKESE 293 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 RK++LFRST GDDVDR L K GS+TYFA+D+AY K RGF+NMI +GSDH Sbjct: 294 NW-TSRKEMLFRSTKFGDDVDRALKKDGGSWTYFASDIAYHFDKISRGFNNMIVELGSDH 352 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GYVKRL+AV +A+S+ +A+I V L +V + +G P+KMSKR+G+F+T R VV+EVG D Sbjct: 353 GGYVKRLKAVVSALSDDQAKIEVKLHNIVNFFENGKPVKMSKRSGNFLTARDVVEEVGRD 412 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 RF+ML RKN +LDFDF KVKEQSK+NP+FYVQYA+AR S+ R A P D L Sbjct: 413 ITRFIMLTRKNDMVLDFDFAKVKEQSKDNPIFYVQYAHARAHSLMRNAPKELPTADPSLL 472 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 EL LI LA++P V+E A EP+++ FYL ++A FH W +G+ Sbjct: 473 RTG----------GELFLIKTLAKWPDVVEIAARLCEPHRITFYLLEVAEAFHVLWGYGK 522 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586 + +RF+ +N LT A+A +I SGL+I +E EMS Sbjct: 523 SDLNMRFILEDNLNLTAAVCFSCRALAHVIASGLSIFNIEPLKEMS 568 >gi|239946988|ref|ZP_04698741.1| arginyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes scapularis] gi|239921264|gb|EER21288.1| arginyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes scapularis] Length = 576 Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust. Identities = 247/566 (43%), Positives = 361/566 (63%), Gaps = 17/566 (3%) Query: 26 KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85 ++I + IE P+D +G LS+N AMI++ + P +A + P + S+ IAG Sbjct: 22 QEIANTATIETPKDSFNGDLSSNIAMIIAAKESISPREVALKFKEVLITLPYIASIEIAG 81 Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 GFIN + + + I+ ++ I K +NIE+VSANPTGPMH+GH R AV Sbjct: 82 PGFINFTIKADSWQASIKDILQHEEKFFEIDIDKSRNINIEYVSANPTGPMHIGHARGAV 141 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205 GD LA ++ GY VT+EYY+NDAG+QIN L +V RY++AL +P G YPG Y Sbjct: 142 YGDVLARILQKVGYSVTKEYYVNDAGSQINDLVSTVLLRYKEAL-GEQITIPVGLYPGEY 200 Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 L +G+ LA +Y ++LL + + IVK+++V+ M+ + R DL L I+HDIF SE Sbjct: 201 LIPLGQILAKEYGNKLLTMNDAEKFKIVKNFAVEKMLDLNRKDLANLGIKHDIFFSEQSL 260 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 H D I + L R G +YEG LP PK K ++ D +R Q LF+ST GD DRP+ Sbjct: 261 H--DKGEIEKTVKLLERMGLIYEGTLPAPKGKVHEEWD-NRVQKLFKSTKYGDSQDRPIE 317 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 K+D S++YFA+DLAY K K ERG +++IYV+G+DHSGYVKR+EA+ A+ ++ +++V + Sbjct: 318 KADRSWSYFASDLAYAKDKIERGANHLIYVLGADHSGYVKRIEAIVKALGKEHVKVDVKI 377 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 C+LV +G+P+KMSKR G F +++ V EVG D +RFMML R+N + LDFD KVKEQ Sbjct: 378 CQLVNFVENGVPVKMSKRLGSFASVQDVNHEVGKDIIRFMMLTRQNDKPLDFDLVKVKEQ 437 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS------ELQLI 499 S+ENP+FYVQYA+ R SI +A+++ P+ ++ F + S++D S E+++I Sbjct: 438 SRENPIFYVQYAHVRTISILSKARELMPE-SYNSF------EASKYDLSLLSSEEEIEII 490 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 LA + + +E +T EP+++AFYL +LAS FH W+ G+EN RFV +N++LT+ R Sbjct: 491 KLLAAWTKTLEASTKYFEPHRIAFYLINLASKFHSMWNFGKENSDYRFVIESNKELTLAR 550 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L A+ +I SGL +IGVE N+M Sbjct: 551 LALASAIQKVIASGLEVIGVEPMNKM 576 >gi|91206117|ref|YP_538472.1| arginyl-tRNA synthetase [Rickettsia bellii RML369-C] gi|157826450|ref|YP_001495514.1| arginyl-tRNA synthetase [Rickettsia bellii OSU 85-389] gi|109895031|sp|Q1RGY1|SYR_RICBR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|166232833|sp|A8GUI1|SYR_RICB8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|91069661|gb|ABE05383.1| Arginyl-tRNA synthetase [Rickettsia bellii RML369-C] gi|157801754|gb|ABV78477.1| arginyl-tRNA synthetase [Rickettsia bellii OSU 85-389] Length = 576 Score = 472 bits (1214), Expect = e-131, Method: Compositional matrix adjust. Identities = 246/577 (42%), Positives = 358/577 (62%), Gaps = 5/577 (0%) Query: 9 SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68 ++LK+ + ++ +I + IE P+D +G LS+N AMI++ + P +A Sbjct: 5 NKLKHDIITASTQLYNNSEIANHASIETPKDSFNGDLSSNIAMIIAAKKNVPPREVALKF 64 Query: 69 VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128 + P + S+ IAG GFIN + + I+ + ++ + K +NIE+V Sbjct: 65 KEILNELPYIASIEIAGPGFINFTIKADSWHTAIKDILQNESKFFEIDVDKNKNINIEYV 124 Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188 SANPTGPMH+GH R AV GD LA+++ GY VT+EYY+NDAG+QIN L +V RY++A Sbjct: 125 SANPTGPMHIGHARGAVYGDVLANILKKVGYPVTKEYYVNDAGSQINDLVSTVILRYREA 184 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248 L + EG YPG YL VG+ LA +Y +LLN E + IVK++++Q M+ + ++D Sbjct: 185 L-GEKITITEGLYPGEYLIPVGQALAKEYGDKLLNMDELERFKIVKNFAIQKMLDLNKED 243 Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308 LK L ++HD+F SE H D I + L G +YEG +P PK K + + +R Q Sbjct: 244 LKELGVKHDVFFSEQTLH--DNGKIEKTVKLLTDMGLIYEGSVPAPKGKVHAEWE-NRTQ 300 Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368 LF+ST GDD DRP+ K+DGS+TYFA+DLAY K K +RG +++IYV+G+DHSGYVKR+E Sbjct: 301 ELFKSTKYGDDQDRPIRKADGSWTYFASDLAYAKDKIDRGANHLIYVLGADHSGYVKRIE 360 Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428 A A+ +++ +++V +C+LV +G+P+KMSKR G F +++ V EVG D +RFMML Sbjct: 361 ATVKALGKEQVKVDVKICQLVNFVENGVPVKMSKRLGTFASVQDVNHEVGKDIIRFMMLT 420 Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488 R+N++ LDFD KVKEQSKENP+FYVQYA+ R SI +A + P ++ F Sbjct: 421 RENNKTLDFDLIKVKEQSKENPIFYVQYAHVRTLSILSKAMETIPQ-SYNSFEAGTYDLS 479 Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548 E+++I LA + + +E A EP+++AFYL +LAS FH W+ G+EN RF+ Sbjct: 480 LLSSEEEIEIIKLLASWTKTLETAAKYFEPHRVAFYLINLASKFHALWNFGKENNDYRFI 539 Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 NN +LT RL L A+ II SGL +IGVE M Sbjct: 540 IENNVELTTARLALAKAIQKIIASGLEVIGVEPMTRM 576 >gi|157964131|ref|YP_001498955.1| arginyl-tRNA synthetase [Rickettsia massiliae MTU5] gi|157843907|gb|ABV84408.1| Arginyl-tRNA synthetase [Rickettsia massiliae MTU5] Length = 578 Score = 472 bits (1214), Expect = e-131, Method: Compositional matrix adjust. Identities = 245/566 (43%), Positives = 359/566 (63%), Gaps = 17/566 (3%) Query: 26 KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85 ++I + IE P+D +G LS+N AMI++ + P +A + P + S+ IAG Sbjct: 24 QEIANTATIETPKDSFNGDLSSNIAMIIAAKESISPREVALKFKEVLITLPYIASIEIAG 83 Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 GFIN + + + I+ ++ I K +NIE+VSANPTGPMH+GH R AV Sbjct: 84 PGFINFTIKADSWQASIKDILQHEEKFFEIDIDKSRNINIEYVSANPTGPMHIGHARGAV 143 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205 GD LA ++ GY VT+EYY+NDAG+QIN L +V RY++AL +P G YPG Y Sbjct: 144 YGDVLARILQKVGYSVTKEYYVNDAGSQINDLVSTVLLRYKEAL-GEQMTIPAGLYPGEY 202 Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 L +G+ LA +Y ++LL + + I+K ++V+ M+ + R DL L I+HDIF SE Sbjct: 203 LIPLGQILAKEYGNKLLTMNDAERFKIIKSFAVEKMLDLNRKDLADLGIKHDIFFSEQSL 262 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 H D I + L R G +YEG LP PK K ++ D +R Q LF+ST GD DRP+ Sbjct: 263 H--DKGEIEATVKLLERMGLIYEGTLPAPKGKIHEEWD-NRVQKLFKSTKYGDSQDRPIA 319 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 K+DGS++YFA+DLAY K K ERG +++IYV+G+DHSGYVKR+EA+ A+ +++ +++V + Sbjct: 320 KADGSWSYFASDLAYAKDKIERGANHLIYVLGADHSGYVKRIEAIVKALGKEQVKVDVKI 379 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 C+LV +G+P+KMSKR G F +++ V EVG D +RFMML R+N + LDFD KVKEQ Sbjct: 380 CQLVNFVENGVPVKMSKRLGSFASVQDVNHEVGKDIIRFMMLTRQNDKPLDFDLVKVKEQ 439 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS------ELQLI 499 S+ENP+FYVQYA+ R SI +A+++ P+ ++ F + ++D S E+++I Sbjct: 440 SRENPIFYVQYAHVRTISILSKARELMPE-SYNHF------EAGKYDLSLLSSEEEIEII 492 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 LA + + +E A EP+++AFYL +LAS H W+ G+EN RFV +N++LT+ R Sbjct: 493 KLLASWTKTLEAAAKYFEPHRIAFYLINLASKVHSMWNFGKENSDYRFVIESNKELTLAR 552 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L A+ +I SGL +IGVE N+M Sbjct: 553 LALASAIRKVIASGLEVIGVEPMNKM 578 >gi|67458501|ref|YP_246125.1| arginyl-tRNA synthetase [Rickettsia felis URRWXCal2] gi|75537032|sp|Q4UN98|SYR_RICFE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|67004034|gb|AAY60960.1| Arginyl-tRNA synthetase [Rickettsia felis URRWXCal2] Length = 576 Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust. Identities = 245/566 (43%), Positives = 361/566 (63%), Gaps = 17/566 (3%) Query: 26 KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85 ++I + IE P+D +G LS+N AMI++ + P +A + P + S+ IAG Sbjct: 22 QEIANTANIETPKDNFNGDLSSNIAMIIAAKESISPREVALKFKEVLTTLPYIASIEIAG 81 Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 GFIN + + + I+ ++ I K +NIE+VSANPTGPMH+GH R AV Sbjct: 82 PGFINFTIKAESWQASIKDILQHEEKFFEIDIDKSRNINIEYVSANPTGPMHIGHARGAV 141 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205 GD LA ++ GY VT+EYY+NDAG+QIN L +V RY++AL +P G YPG Y Sbjct: 142 YGDVLARILQKVGYSVTKEYYVNDAGSQINDLVSTVLLRYREAL-GEKITIPAGLYPGEY 200 Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 L +G+ LA +Y ++LL E + IVK+++V+ M+ + R DL L I+HDIF SE Sbjct: 201 LIPLGQILAKEYGNKLLTMNENERFKIVKNFAVEKMLDLNRKDLADLGIKHDIFFSEQSL 260 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 H D I + L G +YEG LP PK K ++ D +R Q LF+ST GD DRP+ Sbjct: 261 H--DKGEIEGTVKLLTGMGLIYEGTLPAPKGKVHEEWD-NRVQKLFKSTNYGDSQDRPIE 317 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 K+DGS++YFA+DLAY K K +RG +++IYV+G+DHSGYVKR+EA+ A+ +++ +++V + Sbjct: 318 KADGSWSYFASDLAYAKDKIDRGANHLIYVLGADHSGYVKRIEAIVKALGKEQVKVDVKI 377 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 C+LV +G+P+KMSKR G+F +++ V EVG D +RFMML R+N + LDFD KVKEQ Sbjct: 378 CQLVNFVENGVPVKMSKRLGNFASVQDVNHEVGKDIIRFMMLTRQNDKPLDFDLVKVKEQ 437 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS------ELQLI 499 S+ENP+FYVQYA+ R SI +A+++ P+ ++ F +E ++D S E+++I Sbjct: 438 SRENPIFYVQYAHVRTISILSKARELMPE-SYNNF------EEGKYDLSLLSSEEEIEII 490 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 LA + + +E + EP+++AFYL +LAS FH W+ G+EN RFV +N++LT+ R Sbjct: 491 KLLASWTKTLEASAKYFEPHRIAFYLINLASRFHSMWNFGKENSDYRFVIESNKELTLAR 550 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L A+ +I SGL +IGVE + M Sbjct: 551 LALASAIQKVIASGLEVIGVEPMDRM 576 >gi|34580946|ref|ZP_00142426.1| arginyl-tRNA synthetase [Rickettsia sibirica 246] gi|28262331|gb|EAA25835.1| arginyl-tRNA synthetase [Rickettsia sibirica 246] Length = 576 Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust. Identities = 245/566 (43%), Positives = 359/566 (63%), Gaps = 17/566 (3%) Query: 26 KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85 ++I + IE P+D +G LS+N AMI++ + P +A + P + S+ IAG Sbjct: 22 QEIANTATIEIPKDSFNGDLSSNIAMIIAAKESIAPREVALKFKEVLITLPYIASIEIAG 81 Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 GFIN + + + I+ ++ I K +NIE+VSANPTGPMH+GH R AV Sbjct: 82 PGFINFTIKADSWQASIKDILQHEEKFFEIDIDKSKNINIEYVSANPTGPMHIGHARGAV 141 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205 GD LA ++ Y VT+EYY+NDAG+QIN L +V RY++AL +P G YPG Y Sbjct: 142 YGDVLARILQKVSYSVTKEYYVNDAGSQINDLVSTVLLRYKEAL-GEQITIPAGLYPGEY 200 Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 L +G+ LA +Y ++LL + I+K ++V+ M+ + R DL L I+HDIF SE Sbjct: 201 LIPLGQILAKEYGNKLLTMNYAERFKIIKSFAVEKMLDLNRKDLADLGIKHDIFFSEQSL 260 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 H D I + + L R G +YEG LP PK K ++ D +R Q LF+ST GD DRP+ Sbjct: 261 H--DKGEIEETVKLLERMGLIYEGTLPAPKGKIHEEWD-NRVQKLFKSTKYGDSQDRPIE 317 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 K+DGS++YFA+DLAY K K ERG +++IYV+G+DHSGYVKR+EA+ A+ +++ +++V + Sbjct: 318 KADGSWSYFASDLAYAKDKIERGANHLIYVLGADHSGYVKRIEAIVKALGKEQVKVDVKI 377 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 C+LV +G+P+KMSKR G F +++ V EVG D +RFMML R+N + LDFD KVKEQ Sbjct: 378 CQLVNFVENGVPVKMSKRLGSFASVQDVNHEVGKDIIRFMMLTRQNDKPLDFDLVKVKEQ 437 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS------ELQLI 499 S+ENP+FYVQYA+ R SI +AK++ P+ ++ F + ++D S E+++I Sbjct: 438 SRENPIFYVQYAHVRTISILSKAKELMPE-SYNNF------ESGKYDLSLLSSEEEIEII 490 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 LA + + +E + EP+++AFYL +LAS FH W+ G+EN RFV +N++LT+ R Sbjct: 491 KLLASWTKTLEASAKYFEPHRIAFYLINLASKFHSMWNFGKENSDYRFVIESNKELTLAR 550 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L A+ +I SGL +IGVE N+M Sbjct: 551 LALASAIQKVIASGLEVIGVEPMNKM 576 >gi|238650531|ref|YP_002916383.1| arginyl-tRNA synthetase [Rickettsia peacockii str. Rustic] gi|259511656|sp|C4K184|SYR_RICPU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|238624629|gb|ACR47335.1| arginyl-tRNA synthetase [Rickettsia peacockii str. Rustic] Length = 576 Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust. Identities = 245/566 (43%), Positives = 360/566 (63%), Gaps = 17/566 (3%) Query: 26 KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85 ++I + IE P+D +G LS+N AMI++ + P +A + P + S+ IAG Sbjct: 22 QEIANTATIEIPKDSFNGDLSSNVAMIIAAKESIAPREVALKFKEVLITLPYIASIEIAG 81 Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 GFIN + + + I+ ++ I K +NIE+VSANPTGPMH+GH R AV Sbjct: 82 PGFINFTIKADSWQASIKDILQHEEKFFEIDIDKSRNINIEYVSANPTGPMHIGHARGAV 141 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205 GD LA ++ Y VT+EYY+NDAG+QIN L +V RY++AL +P G YPG Y Sbjct: 142 YGDVLARILQKVSYSVTKEYYVNDAGSQINDLVSTVLLRYKEAL-GEQITIPAGLYPGEY 200 Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 L +G+ LA +Y ++LL + IVK ++V+ M+ + R DL L I+HDIF SE Sbjct: 201 LIPLGQILAKEYGNKLLTMNYAERFKIVKSFAVEKMLDLNRKDLADLGIKHDIFFSEQSL 260 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 H D I + + L R G +YEG LP PK K ++ D +R Q LF+ST GD DRP+ Sbjct: 261 H--DKGEIEETVKLLERMGLIYEGTLPAPKGKIHEEWD-NRVQKLFKSTKYGDSQDRPIE 317 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 K+DGS++YFA+DLAY K K ERG +++IYV+G+DHSGYVKR+EA+ A+ +++ +++V + Sbjct: 318 KADGSWSYFASDLAYAKDKIERGANHLIYVLGADHSGYVKRIEAIVKALGKEQVKVDVKI 377 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 C+LV +G+P+KMSKR G+F +++ V EVG D +RFMML R+N + LDFD KVKEQ Sbjct: 378 CQLVNFVENGVPVKMSKRLGNFASVQDVNHEVGKDIIRFMMLTRQNDKPLDFDLVKVKEQ 437 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS------ELQLI 499 S+ENP+FYVQYA+ R SI +A+++ P+ ++ F + ++D S E+++I Sbjct: 438 SRENPIFYVQYAHVRTISILSKARELIPE-SYNNF------ESGKYDLSLLSSEEEIEII 490 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 LA + + +E + EP+++AFYL +LAS FH W+ G+EN RFV +N++LT+ R Sbjct: 491 KLLASWTKTLEASAKYFEPHRIAFYLINLASKFHSMWNFGKENSDYRFVIESNKELTLAR 550 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L A+ +I SGL +IGVE N+M Sbjct: 551 LALASAIQKVIASGLEVIGVEPMNKM 576 >gi|15892018|ref|NP_359732.1| arginyl-tRNA synthetase [Rickettsia conorii str. Malish 7] gi|21542254|sp|Q92JH2|SYR_RICCN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|15619134|gb|AAL02633.1| arginyl-tRNA synthetase [Rickettsia conorii str. Malish 7] Length = 576 Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust. Identities = 245/566 (43%), Positives = 359/566 (63%), Gaps = 17/566 (3%) Query: 26 KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85 ++I + IE P+D +G LS+N AMI++ + P +A + P + S+ IAG Sbjct: 22 QEIANTATIEIPKDSFNGDLSSNIAMIIAAKESIAPREVALKFKEVLITLPYIASIEIAG 81 Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 GFIN + + + I+ ++ I K +NIE+VSANPTGPMH+GH R AV Sbjct: 82 PGFINFTIKADSWQASIKDILQHEEKFFEIDIDKSRNINIEYVSANPTGPMHIGHARGAV 141 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205 GD LA ++ Y VT+EYY+NDAG+QIN L +V RY++AL +P G YPG Y Sbjct: 142 YGDVLARILQKVSYSVTKEYYVNDAGSQINDLVSTVLLRYKEAL-GEQITIPAGLYPGEY 200 Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 L +G+ LA +Y ++LL + I+K ++V+ M+ + R DL L I+HDIF SE Sbjct: 201 LIPLGQILAKEYGNKLLTMNYAERFKIIKSFAVEKMLDLNRKDLADLGIKHDIFFSEQSL 260 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 H D I + + L R G +YEG LP PK K ++ D +R Q LF+ST GD DRP+ Sbjct: 261 H--DKGEIEETVKLLERMGLIYEGTLPAPKGKIHEEWD-NRVQKLFKSTKYGDSQDRPIE 317 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 K+DGS++YFA+DLAY K K ERG +++IYV+G+DHSGYVKR+EA+ A+ +++ +++V + Sbjct: 318 KADGSWSYFASDLAYAKDKIERGANHLIYVLGADHSGYVKRIEAIVKALGKEQVKVDVKI 377 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 C+LV +G+P+KMSKR G F +++ V EVG D +RFMML R+N + LDFD KVKEQ Sbjct: 378 CQLVNFVENGVPVKMSKRLGSFASVQDVNHEVGKDIIRFMMLTRQNDKPLDFDLVKVKEQ 437 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS------ELQLI 499 S+ENP+FYVQYA+ R SI +AK++ P+ ++ F + ++D S E+++I Sbjct: 438 SRENPIFYVQYAHVRTISILSKAKELMPE-SYNNF------ESGKYDLSLLSSEEEIEII 490 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 LA + + +E + EP+++AFYL +LAS FH W+ G+EN RFV +N++LT+ R Sbjct: 491 KLLASWTKTLEASAKYFEPHRIAFYLINLASKFHSMWNFGKENSDYRFVIESNKELTLAR 550 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L A+ +I SGL +IGVE N+M Sbjct: 551 LALASAIQKVIASGLEVIGVEPMNKM 576 >gi|229586306|ref|YP_002844807.1| arginyl-tRNA synthetase [Rickettsia africae ESF-5] gi|259511655|sp|C3PMA4|SYR_RICAE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|228021356|gb|ACP53064.1| Arginyl-tRNA synthetase [Rickettsia africae ESF-5] Length = 576 Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust. Identities = 244/566 (43%), Positives = 359/566 (63%), Gaps = 17/566 (3%) Query: 26 KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85 ++I + IE P+D +G LS+N AMI++ + P +A + P + S+ IAG Sbjct: 22 QEIANTATIEIPKDSFNGDLSSNIAMIIAAKESIAPREVALKFKEVLITLPYIASIEIAG 81 Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 GFIN + + + I+ ++ I K +NIE+VSANPTGPMH+GH R A+ Sbjct: 82 PGFINFTIKADSWQASIKDILQHEEKFFEIDIDKSKNINIEYVSANPTGPMHIGHARGAI 141 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205 GD LA ++ Y VT+EYY+NDAG+QIN L +V RY++AL +P G YPG Y Sbjct: 142 YGDVLARILQKVSYSVTKEYYVNDAGSQINDLVSTVLLRYKEAL-GEQITIPAGLYPGEY 200 Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 L +G+ LA +Y ++LL + I+K ++V+ M+ + R DL L I+HDIF SE Sbjct: 201 LIPLGQILAKEYGNKLLTMNYAERFKIIKSFAVEKMLDLNRKDLADLGIKHDIFFSEQSL 260 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 H D I + + L R G +YEG LP PK K ++ D +R Q LF+ST GD DRP+ Sbjct: 261 H--DKGEIEETVKLLERMGLIYEGTLPAPKGKIHEEWD-NRVQKLFKSTKYGDSQDRPIE 317 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 K+DGS++YFA+DLAY K K ERG +++IYV+G+DHSGYVKR+EA+ A+ +++ +++V + Sbjct: 318 KADGSWSYFASDLAYAKDKIERGANHLIYVLGADHSGYVKRIEAIVKALGKEQVKVDVKI 377 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 C+LV +G+P+KMSKR G F +++ V EVG D +RFMML R+N + LDFD KVKEQ Sbjct: 378 CQLVNFVENGVPVKMSKRLGSFASVQDVNHEVGKDIIRFMMLTRQNDKPLDFDLVKVKEQ 437 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS------ELQLI 499 S+ENP+FYVQYA+ R SI +AK++ P+ ++ F + ++D S E+++I Sbjct: 438 SRENPIFYVQYAHVRTISILSKAKELMPE-SYNNF------ESGKYDLSLLSSEEEIEII 490 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 LA + + +E + EP+++AFYL +LAS FH W+ G+EN RFV +N++LT+ R Sbjct: 491 KLLASWTKTLEASAKYFEPHRIAFYLINLASKFHSMWNFGKENSDYRFVIESNKELTLAR 550 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L A+ +I SGL +IGVE N+M Sbjct: 551 LALASAIQKVIASGLEVIGVEPMNKM 576 >gi|157803251|ref|YP_001491800.1| arginyl-tRNA synthetase [Rickettsia canadensis str. McKiel] gi|166232834|sp|A8EXD2|SYR_RICCK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|157784514|gb|ABV73015.1| arginyl-tRNA synthetase [Rickettsia canadensis str. McKiel] Length = 576 Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust. Identities = 245/564 (43%), Positives = 359/564 (63%), Gaps = 13/564 (2%) Query: 26 KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85 ++I + + IE +D +G LS+N AMI++ + P T+A + P + S+ IAG Sbjct: 22 QEIANIVTIETSKDNFNGDLSSNIAMIIAAKENMPPRTVALKFKEILITLPYIASIEIAG 81 Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 GFIN + + + +I+ ++ I K +NIE+VSANPTGPMH+GH R AV Sbjct: 82 PGFINFTIKAESWQIAIKNILQHEGKFFEIDIDKNKYINIEYVSANPTGPMHIGHARGAV 141 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205 GD LA ++ GY VT+EYY+NDAG+QIN L +V RY++AL +P G YPG Y Sbjct: 142 YGDVLARILQKVGYNVTKEYYVNDAGSQINDLVSTVLLRYREAL-GEKITIPVGLYPGEY 200 Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 L VG+ L +Y ++LL EE+ IVK+++V+ M+ + R DL+ L I+HD+F SE Sbjct: 201 LIPVGQILVKEYGNKLLVMDEEERFKIVKNFAVEKMLDLNRKDLEELGIKHDLFFSEQSL 260 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 H D I +I+ L G +YEG LP PK K K D +R Q LF+ST GD DRP+ Sbjct: 261 H--DKGKIEEIVKLLTNMGLIYEGTLPAPKGKIHAKWD-NRVQKLFKSTKYGDSQDRPIE 317 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 K+DGS++YFA+DLAY K K +RG +++IYV+G+DHSGYVKR+EA+ A+ +++ +++V + Sbjct: 318 KADGSWSYFASDLAYAKDKIDRGANHLIYVLGADHSGYVKRIEAIVKALGKEQIKVDVKI 377 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 C+LV +G+P+KMSKR G+F +++ V EVG D +RFMML R+N + LDFD KVKEQ Sbjct: 378 CQLVNFIENGVPVKMSKRLGNFASVQDVNHEVGKDIIRFMMLTRQNDKPLDFDLVKVKEQ 437 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPD----LDFDLFPRNVIPQESEFDTSELQLIVH 501 S+ENP+FYVQYA+ R SI +A ++ P+ + ++ +++ E E D +L Sbjct: 438 SRENPIFYVQYAHVRTVSILSKAMELMPESYSSFEAGIYDLSLLSSEEEIDIIKL----- 492 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 LA + + +E + EP+++A YL +LAS FH W+ G+EN RFV NN++LT RL Sbjct: 493 LAAWTKTLEVSAKYFEPHRIALYLINLASKFHSIWNFGKENSDYRFVIENNKELTTARLA 552 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 L A+ +I SG +IGVE N+M Sbjct: 553 LAKAIQKVIASGFEVIGVEPMNKM 576 >gi|58040184|ref|YP_192148.1| arginyl-tRNA synthetase [Gluconobacter oxydans 621H] gi|81351656|sp|Q5FQ54|SYR_GLUOX RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|58002598|gb|AAW61492.1| Arginyl-tRNA synthetase [Gluconobacter oxydans 621H] Length = 602 Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust. Identities = 247/574 (43%), Positives = 355/574 (61%), Gaps = 20/574 (3%) Query: 26 KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85 ++++ R+ + RD +HG ++TNAAM+ ++P P IA +V ++ P+V AG Sbjct: 34 EEVVQRVDLTPTRDPSHGDMATNAAMLAAKPARRKPAEIAAELVDKLFALPEVAKAEAAG 93 Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 GF+NL L P L+ + SI+ +G +YGR+ +G+GT+VN+E+VSANPTGPMHVGHCR AV Sbjct: 94 PGFVNLTLKPEVLQGVAVSILKAGDQYGRSTMGQGTRVNVEYVSANPTGPMHVGHCRGAV 153 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD------LPEG 199 VGD LA+L+ +G VTREYYINDAG Q+ L + +WRY Q + S P G Sbjct: 154 VGDALANLLEAAGNTVTREYYINDAGTQVVALTWATYWRYLQVIGTEISADDFSPLTPNG 213 Query: 200 Y-YPGVYLKHVGKELADKYSSELLNF---PEEK--WLPIVKDYSVQAMMKIIRDDLKALN 253 Y G YL V + +ADK+ L N P + W V+ ++ MM IR+DL+AL Sbjct: 214 LQYQGEYLIPVAQSIADKHGRALANADGGPADPSVWFETVRREALTQMMAAIREDLEALG 273 Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313 I H++F SE + + I L +G +YEG+L PPK K + + R Q LFRS Sbjct: 274 ISHEVFASEAETLAS--GRVDAAIAKLDSKGLLYEGVLEPPKGKMPEDWEA-RPQTLFRS 330 Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373 T GDD DR L KSDG+ TYFA D+ Y K E D +I V+G+DH GYV R+ A +A Sbjct: 331 TEFGDDQDRALRKSDGTNTYFANDIGYHAQKAENA-DVLIDVLGADHGGYVSRMRAAISA 389 Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433 +++ K V++C++VR+ ++G P++MSKRAG F+TLR ++DEVG D+VRF ML RK Sbjct: 390 LTDGKTGFEVVMCQIVRVVKNGEPVRMSKRAGTFVTLRDLLDEVGRDAVRFTMLTRKADA 449 Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493 ++FD V Q+++NPVFYVQYA+ARCRS+ R A+ +F + P + + + Sbjct: 450 QMEFDLDAVVAQTRDNPVFYVQYAHARCRSVLRSAETMFG--ADTVTPEALCSADLSNLS 507 Query: 494 SELQLIV--HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551 S+++L V LA +PR +E A A+EP+++A Y DLAS FH W+ GRE+ LRF+ N Sbjct: 508 SDVELAVLRRLAAFPRSVEAAATAREPHRIATYCIDLASDFHALWNRGREDTTLRFLHEN 567 Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +R ++ +L LV A+A + L I+GV EM Sbjct: 568 DRATSLAKLALVSAIAGTLRCALTILGVVPVEEM 601 >gi|157825222|ref|YP_001492942.1| arginyl-tRNA synthetase [Rickettsia akari str. Hartford] gi|166232832|sp|A8GM09|SYR_RICAH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|157799180|gb|ABV74434.1| arginyl-tRNA synthetase [Rickettsia akari str. Hartford] Length = 576 Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust. Identities = 245/562 (43%), Positives = 361/562 (64%), Gaps = 9/562 (1%) Query: 26 KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85 ++I + IE P+D +G LS+N AMI++ + P +A + P + S+ IAG Sbjct: 22 QEIANNATIETPKDNFNGDLSSNIAMIIAAKENISPREVALKFKEILITLPYIASIEIAG 81 Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 GFIN + + + I+ ++ I K +NIE+VSANPTGPMH+GH R AV Sbjct: 82 PGFINFTIKAETWQIAIKDILQHEEKFCEIDIDKSRNINIEYVSANPTGPMHIGHARGAV 141 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205 GD LA ++ GY VT+EYY+NDAG+QIN L +V RY++AL + +P+G YPG Y Sbjct: 142 YGDVLARILQKVGYFVTKEYYVNDAGSQINDLVSTVLLRYREALGETIT-IPDGLYPGEY 200 Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 L +G+ LA++Y ++LL EE+ IVK+++V+ M+ + R DL L I+HDIF SE Sbjct: 201 LIPLGQILAEEYGNKLLMMDEEERFKIVKNFAVEKMLDLNRKDLADLGIKHDIFFSEQSL 260 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 H D I + + L G +YEGILPPPK K + D +R Q LF+ST GD DRP+ Sbjct: 261 H--DKCAIEETVKLLTGMGLIYEGILPPPKGKVHDEWD-NRVQKLFKSTNYGDSQDRPIE 317 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 K+DGS++YFA+DLAY K K +RG ++IYV+G+DHSGYVKR+EA+ A+ +++ +++V + Sbjct: 318 KADGSWSYFASDLAYAKDKIDRGVSHLIYVLGADHSGYVKRIEAIVKALGKEQVKVDVKI 377 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 C+LV +G+P+KMSKR G F +++ V EVG D +RFMML R+N + LDFD KVKEQ Sbjct: 378 CQLVNFVENGVPVKMSKRLGSFASVQDVNHEVGKDIIRFMMLTRQNDKPLDFDLVKVKEQ 437 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDL--DFDLFPRNVIPQESEFDTSELQLIVHLA 503 S+ENP+FYVQYA+ R SI +A+++ P+ +F+ ++ SE E+ +I LA Sbjct: 438 SRENPIFYVQYAHVRTISILSKARELMPESYNNFEACKYDLSLLSSE---EEIAIIKLLA 494 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 + + +E + EP+++AFYL +LAS FH W+ G+E+ RF+ +N++LT RL L Sbjct: 495 SWTKTLETSAKYFEPHRIAFYLINLASKFHSMWNFGKEHSDYRFIIESNKELTTARLALA 554 Query: 564 HAVASIINSGLNIIGVESPNEM 585 A+ +I SGL +IGVE + M Sbjct: 555 TAIQKVIASGLEVIGVEPMDRM 576 >gi|15603944|ref|NP_220459.1| arginyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E] gi|6226193|sp|Q9ZE81|SYR_RICPR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|3860635|emb|CAA14536.1| ARGINYL-TRNA SYNTHETASE (argS) [Rickettsia prowazekii] gi|292571662|gb|ADE29577.1| Arginyl-tRNA synthetase [Rickettsia prowazekii Rp22] Length = 576 Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust. Identities = 245/574 (42%), Positives = 360/574 (62%), Gaps = 9/574 (1%) Query: 9 SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68 ++LK + K+ K+I + IE P+D +G LS+N AMI++ + P +A Sbjct: 5 NQLKQDIIAASQKLYNNKEIANTATIETPKDSFNGDLSSNIAMIIASKESIAPREVALKF 64 Query: 69 VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128 + P + S+ IAG GFIN + + + I+ ++ I K + +NIE+V Sbjct: 65 KEVLVTLPYIASIEIAGPGFINFTIKAESWQAAIKDILQHEEKFFEIDIDKNSNINIEYV 124 Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188 SANPTGPMH+GH R AV GD LA ++ GY VT+EYY+NDAG+QIN L +V RY++A Sbjct: 125 SANPTGPMHIGHARGAVYGDVLARILQKVGYSVTKEYYVNDAGSQINDLVSTVLLRYKEA 184 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248 L +P G YPG YL +G+ L+ +Y ++LL + + I+K ++V+ M+ + R D Sbjct: 185 L-GEPITIPVGLYPGEYLIPLGEILSKEYGNKLLTMNDVERFKIIKSFAVEKMLDLNRKD 243 Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308 L L I+HD+F SE + D I + L R G +YEG LP PK K + + R Q Sbjct: 244 LADLGIKHDVFFSEQSLY--DKGEIEKTVKLLERMGLIYEGTLPAPKGKVHEDWEY-RVQ 300 Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368 LF+ST GD DRP+ K+DGS++YFA+DLAY K K +RG +++IYV+G+DHSGYVKR+E Sbjct: 301 KLFKSTNYGDSQDRPIEKADGSWSYFASDLAYAKDKIDRGANHLIYVLGADHSGYVKRIE 360 Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428 A+ A+ ++K +++V +C+LV +G+PIKMSKR G F +++ V EVG D +RFMML Sbjct: 361 AIVKALGQEKVKVDVKICQLVNFVENGVPIKMSKRLGSFASVQDVNKEVGKDIIRFMMLT 420 Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL--DFDLFPRNVIP 486 R+N + LDFD KVKEQS+ENP+FYVQYA+ R +SI +A+++ P+ F N+ Sbjct: 421 RQNDKPLDFDLVKVKEQSRENPIFYVQYAHVRTKSILSKARELMPEAYNSFKEGKYNLSL 480 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 SE E+++I LA + + +E + EP+++AFYL +LAS FH W+ G+EN R Sbjct: 481 LSSE---EEIEIIKLLAAWTKTLEASVKYFEPHRIAFYLINLASKFHSMWNFGKENSDYR 537 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 F+ NN++LT+ RL L + II SGL +IGVE Sbjct: 538 FIIENNKELTLARLALASVIQKIIASGLEVIGVE 571 >gi|87199111|ref|YP_496368.1| arginyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444] gi|109895012|sp|Q2G9D9|SYR_NOVAD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|87134792|gb|ABD25534.1| arginyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444] Length = 582 Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust. Identities = 256/564 (45%), Positives = 355/564 (62%), Gaps = 29/564 (5%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + E PRD +HG L+TNAAM+L++P G +P +A + A ++ +P V S IAG GFINL Sbjct: 38 VTCEPPRDPSHGDLATNAAMVLAKPAGTNPRALATALAAELEKEPRVVSAEIAGPGFINL 97 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+ R L+ I +G +YGR+ +G VN+E+VSANPTGPMH+GHCR AVVGD LA Sbjct: 98 RLTDDAWRGELALIGSAGADYGRSTMGGSKVVNVEYVSANPTGPMHMGHCRGAVVGDALA 157 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 L+AFSG++V +EYY+NDAGAQ++ LA SV RY++AL ++PEG YPG YL VGK Sbjct: 158 DLLAFSGHQVIKEYYVNDAGAQVDVLARSVHMRYREAL-GETVEIPEGLYPGDYLVPVGK 216 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 LA+++ + E WL + + +V AMM +IR DL L I HD+F SE + S Sbjct: 217 ALAEEFGDKYAKAAEADWLILFRTRAVAAMMDMIRSDLATLGIHHDLFSSEAELQ---AS 273 Query: 272 PIRDIIDNLAR-QGYVYEGILPPPKSKTTQKCDMDRKQL-LFRSTMVGDDVDRPLLKSDG 329 D + R VY+G+L PK KT + D + L LFRST GDD DRP+ KS+G Sbjct: 274 GKVDAAEQWLRAHDLVYDGLLEAPKGKTPE--DWEPVVLPLFRSTKFGDDQDRPIKKSNG 331 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI----NVLL 385 ++TYF ADLAY K + D ++ + G+DH+G VKR++A AA++ V L Sbjct: 332 AWTYFGADLAYHFQKAQTA-DALVDIWGADHAGTVKRIKAAVAALTSADGGTPKPFEVKL 390 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 ++V+L RDG P+KMSKR+G+F+TL VV+EVG D VRF ML RK +DFDF KV E Sbjct: 391 VQMVQLLRDGEPVKMSKRSGNFVTLSDVVEEVGKDVVRFTMLTRKPDAQMDFDFAKVVEA 450 Query: 446 SKENPVFYVQYAYAR-CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD---TSELQLIVH 501 SK+NPVFYVQYA+AR CR++ + A + F P + D EL L+ Sbjct: 451 SKDNPVFYVQYAHARICRNLRKGADEGF------------APSSANLDLLGDEELALVKL 498 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 A++PR IE A A+EP+++AF+L+DLAS FH ++ G + P RF+ A + +T RL Sbjct: 499 AAQFPRTIEAAAAAREPHRIAFFLHDLASAFHSFYNLGNDRPDKRFIVAQDSAMTAARLF 558 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 L + +I +GL ++GVE+ E+ Sbjct: 559 LAAQIGQVIRNGLAVLGVEAAQEL 582 >gi|157827969|ref|YP_001494211.1| arginyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165932660|ref|YP_001649449.1| arginyl-tRNA synthetase [Rickettsia rickettsii str. Iowa] gi|166232835|sp|A8GQM8|SYR_RICRS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|189083544|sp|B0BW17|SYR_RICRO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|157800450|gb|ABV75703.1| arginyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165907747|gb|ABY72043.1| arginyl-tRNA synthetase [Rickettsia rickettsii str. Iowa] Length = 576 Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust. Identities = 241/566 (42%), Positives = 358/566 (63%), Gaps = 17/566 (3%) Query: 26 KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85 + I + I+ P+D +G LS+N AMI++ + P +A + P + S+ IAG Sbjct: 22 QAIANTATIDIPKDSFNGDLSSNVAMIIAAKESIAPREVALKFKEVLITLPYIASIEIAG 81 Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 GFIN + + + I+ ++ I K +NIE+VSANPTGPMH+GH R AV Sbjct: 82 PGFINFTIKADSWQASIKDILQHEEKFFEIDIDKSRNINIEYVSANPTGPMHIGHARGAV 141 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205 GD LA ++ Y VT+EYY+NDAG+QIN L +V RY++AL +P G YPG Y Sbjct: 142 YGDVLARILQKVSYSVTKEYYVNDAGSQINDLVSTVLLRYKEAL-GEQITIPAGLYPGEY 200 Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 L +G+ LA +Y ++LL ++ I+K ++V+ M+ + R DL L I+HDIF SE Sbjct: 201 LIPLGQILAKEYGNKLLTMNYDERFKIIKSFAVEKMLDLNRKDLADLGIKHDIFFSEQSL 260 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 H D I + + L G +YEG LP PK K ++ D +R Q LF+ST GD DRP+ Sbjct: 261 H--DKGEIEETVKLLESMGLIYEGTLPAPKGKIHEEWD-NRVQKLFKSTKYGDSQDRPIE 317 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 K+DGS++YFA+DLAY K K ERG +++IYV+G+DHSGYVKR+EA+ A+ +++ +++V + Sbjct: 318 KADGSWSYFASDLAYAKDKIERGANHLIYVLGADHSGYVKRIEAIVKALGKEQVKVDVKI 377 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 C+LV +G+P+KMSKR G F +++ V +EVG D +RFMML R+N + LDFD KVKEQ Sbjct: 378 CQLVNFVENGVPVKMSKRLGSFASVQDVNNEVGKDIIRFMMLTRQNDKPLDFDLVKVKEQ 437 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS------ELQLI 499 S+ENP+FYVQYA+ R SI +A+++ P+ ++ F + ++D S E+++I Sbjct: 438 SRENPIFYVQYAHVRTISILSKARELMPE-SYNNF------ESGKYDLSLLSSEEEIEII 490 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 L + + +E + EP+++AFYL +LAS FH W+ G+EN RFV +N++LT+ R Sbjct: 491 KLLVSWTKTLEASAKYFEPHRIAFYLINLASKFHSMWNFGKENSEYRFVIESNKELTLAR 550 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L A+ +I SGL +IGVE N+M Sbjct: 551 LALASAIQKVIASGLEVIGVEPMNKM 576 >gi|51473278|ref|YP_067035.1| arginyl-tRNA synthetase [Rickettsia typhi str. Wilmington] gi|81390280|sp|Q68XT9|SYR_RICTY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|51459590|gb|AAU03553.1| Arginine translase [Rickettsia typhi str. Wilmington] Length = 576 Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust. Identities = 236/561 (42%), Positives = 354/561 (63%), Gaps = 17/561 (3%) Query: 26 KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85 ++I + IE P+D +G LS+N AMI++ + P +A + P + S+ IAG Sbjct: 22 QEIANTATIETPKDSFNGDLSSNIAMIIASKESIAPREVALKFKEVLVTLPYIASIEIAG 81 Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 GFIN + + + I+ ++ I K + +NIE+VSANPTGPMH+GH R AV Sbjct: 82 PGFINFTIKAESWQAAIKDILQHEEKFFEIDIDKNSNINIEYVSANPTGPMHIGHARGAV 141 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205 GD LA ++ GY VT+EYY+NDAG+QIN L +V RY++AL +P G YPG Y Sbjct: 142 YGDVLARILQKVGYSVTKEYYVNDAGSQINDLVSTVLLRYKEAL-GEQITIPIGLYPGEY 200 Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 L +G+ L+ +Y ++LL + + I+K +V+ M+ + R DL L I+HDIF SE Sbjct: 201 LIPLGEILSKEYGNKLLTMNDVERFKIIKSLAVEKMLDLNRKDLADLGIKHDIFFSEQSL 260 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 + D I + L G +YEG LP PK K + + Q LF+ST GD DRP+ Sbjct: 261 Y--DKGEIEKTVKLLESMGLIYEGTLPAPKGKVHEDWK-HKVQKLFKSTNYGDSQDRPIE 317 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 K+DGS++YFA+DLAY K K +RG +++IYV+G+DHSGYVKR+EA+ A+ ++K +++V + Sbjct: 318 KADGSWSYFASDLAYAKDKIDRGANHLIYVLGADHSGYVKRIEAIVKALGQEKVKVDVKI 377 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 C+LV +G+P+KMSKR G F +++ V +VG D +RFMML R+N + LDFD KVKEQ Sbjct: 378 CQLVNFVENGVPVKMSKRLGSFASVQDVNKKVGKDIIRFMMLTRQNDKPLDFDLVKVKEQ 437 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS------ELQLI 499 S+ENP+FYVQYA+ R +SI +A+++ P+ ++ F +E +++ S E+++I Sbjct: 438 SRENPIFYVQYAHVRTKSILSKARELMPEA-YNSF------KEGKYNLSLLSTEEEIEII 490 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 LA + + +E + EP+++AFYL +LAS FH W+ G+EN RF+ NN++LT+ R Sbjct: 491 KLLAAWTKTLEASVKYFEPHRIAFYLINLASKFHSMWNFGKENSDYRFIIENNQELTLAR 550 Query: 560 LQLVHAVASIINSGLNIIGVE 580 L L + +I SGL +IGVE Sbjct: 551 LALASVIQKVIASGLEVIGVE 571 >gi|88657836|ref|YP_507350.1| arginyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas] gi|109894990|sp|Q2GGT3|SYR_EHRCR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|88599293|gb|ABD44762.1| arginyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas] Length = 576 Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust. Identities = 241/560 (43%), Positives = 346/560 (61%), Gaps = 16/560 (2%) Query: 28 ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87 IL +++++ P + HG L TNAA+ILS + PL IAE++++ ++ S+ + G Sbjct: 30 ILSKLIVDYPNNHNHGDLYTNAALILSSHIKKSPLEIAEILLSEFSNIKEISSINVVKPG 89 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FIN +S ++++SI + + IG G KVN+EFVSANPTGPMH+GH R A+ G Sbjct: 90 FINFSISLYVWYEVVASINMLKEGFANVNIGNGQKVNVEFVSANPTGPMHIGHARGAIFG 149 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D LA+L+ GY+V REYYINDAG QI+ L SV+ RY++A D + G YPG+YL+ Sbjct: 150 DVLANLLEKVGYQVVREYYINDAGTQIDVLVESVYLRYKEAT-GQDIVIGSGLYPGLYLR 208 Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 +GK L +KY ++LL + + I++D S++ +M +I++DL L I+HD+F SE + + Sbjct: 209 EIGKLLYEKYGTDLLEMSFVRKMKIIRDVSLEYLMNLIKEDLALLGIEHDVFTSEAELLK 268 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 + + + L + +Y G+L PK Q R Q+LF+ST GDDVDR L K Sbjct: 269 NNI--VEKCVKLLEDKQLIYYGVLEQPKGTEMQNWK-PRTQMLFKSTDFGDDVDRALQKV 325 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387 DGS+TYFA D+AY K RGF +MI +GSDH GYVKRL+A A+S A +++ L Sbjct: 326 DGSWTYFANDIAYHFDKISRGFQHMILELGSDHIGYVKRLKAAVKALSNNNATVDIKLHN 385 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 V DG+ +KMSKR+G+F+T+R V+++VG D VRFMML RK+ +LDFDF KV EQSK Sbjct: 386 TVNFLDDGVQVKMSKRSGEFLTIRDVIEKVGKDVVRFMMLTRKSDVVLDFDFAKVVEQSK 445 Query: 448 ENPVFYVQYAYARCRSIFRQAKDIF--PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 NP+FYVQYA+AR S+ R A +I D DF + E+ LI LA++ Sbjct: 446 NNPIFYVQYAHARVCSLMRNAPNILGIEDTDFSVLS----------SKEEILLIKLLAKW 495 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 P V+E + EP+++ FYL ++A FH W +G +N RF+ N+ LT R+ L + Sbjct: 496 PNVVEMSAKTAEPHRITFYLIEVAEAFHVLWGYGNKNANRRFIIDNDVNLTSARIYLAKS 555 Query: 566 VASIINSGLNIIGVESPNEM 585 VA II+SGL I + EM Sbjct: 556 VAYIISSGLKIFSIVPLEEM 575 >gi|114327924|ref|YP_745081.1| arginyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1] gi|114316098|gb|ABI62158.1| arginyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1] Length = 591 Score = 455 bits (1171), Expect = e-126, Method: Compositional matrix adjust. Identities = 250/572 (43%), Positives = 354/572 (61%), Gaps = 21/572 (3%) Query: 27 KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK 86 ++ R+ + RD HG ++TNAAMI ++P G P +A+ + A + +++ AG Sbjct: 27 ELTARVEVTPTRDPLHGDMATNAAMIAAKPAGKPPRDLAQALSAALAGVTEIERAEPAGP 86 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GF+N++L R + +I+ +GI YG G G +VNIE+VSANPTGPMH+GHCR AVV Sbjct: 87 GFVNMHLRAEAWRMRIPAILEAGIRYGDGSAGYGKRVNIEYVSANPTGPMHIGHCRGAVV 146 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN------DSDLPEGY 200 GD LA+LM +GY VT+EYYINDAGAQ+ LA + +WRY QAL + +P G Sbjct: 147 GDALANLMGKAGYTVTKEYYINDAGAQVIALAWAAYWRYLQALGTTLTEDEYAAQVPCGL 206 Query: 201 -YPGVYLKHVGKELADKYSSELLNFPEEK------WLPIVKDYSVQAMMKIIRDDLKALN 253 Y G YL VG+ELA + + L P WL V++++V MM IR+DL L Sbjct: 207 QYRGDYLVPVGEELA-RLHGDTLAGPGTTVADSALWLNTVREFTVAQMMASIREDLDLLG 265 Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313 + D+F SE + + I+ L + G +YEG+L PPK KT + R+Q LFRS Sbjct: 266 VHPDVFSSELALLQSGAADA--AIERLQQDGLIYEGVLEPPKGKTPDDWE-PREQTLFRS 322 Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373 T GDDVDRPL KSDG+ TYFA D+AY K R D ++ V+G+DH GYV R++A A Sbjct: 323 TSFGDDVDRPLRKSDGTNTYFANDIAYHADKATRA-DIVVDVLGADHGGYVPRVKAAMRA 381 Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433 ++ +A +LC++V + RDG P++MSKRAG ++TLR +++EVG D+VRF ML RK+ Sbjct: 382 IA-PQAIYEAVLCQIVHVVRDGQPVRMSKRAGTYVTLRDLLEEVGRDAVRFTMLTRKSDA 440 Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493 ++FD + Q++ENPVFYVQYA+ARC S+ R A + + + +S Sbjct: 441 QMEFDLDQALAQTRENPVFYVQYAHARCCSVLRMAAEQGLTTQPEALRHAAL--DSLTSD 498 Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553 +EL LI LA +PR++E A A+EP+++AF+LY+LA FH W+ GR++ LRF+Q + Sbjct: 499 AELTLIRRLAGWPRIVEAAAQAREPHRIAFFLYELAGDFHMLWNKGRDDATLRFIQQDRT 558 Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 T RL LV A A +I SGL ++GV NEM Sbjct: 559 TETTARLALVEAAAIVIRSGLAVMGVAPVNEM 590 >gi|68171671|ref|ZP_00545032.1| Arginyl-tRNA synthetase, class Ic [Ehrlichia chaffeensis str. Sapulpa] gi|67998906|gb|EAM85597.1| Arginyl-tRNA synthetase, class Ic [Ehrlichia chaffeensis str. Sapulpa] Length = 576 Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust. Identities = 241/560 (43%), Positives = 345/560 (61%), Gaps = 16/560 (2%) Query: 28 ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87 IL +++++ P + HG L TNAA+ILS + PL IAE++++ + S+ + G Sbjct: 30 ILSKLIVDYPNNHNHGDLYTNAALILSSHIKKSPLEIAEILLSEFSNIKGISSINVVKPG 89 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FIN +S ++++SI + + IG G KVN+EFVSANPTGPMH+GH R A+ G Sbjct: 90 FINFSISLYVWYEVVASINMLKEGFANVNIGNGQKVNVEFVSANPTGPMHIGHARGAIFG 149 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D LA+L+ GY+V REYYINDAG QI+ L SV+ RY++A D + G YPG+YL+ Sbjct: 150 DVLANLLEKVGYQVVREYYINDAGTQIDVLVESVYLRYKEAT-GQDIVIGSGLYPGLYLR 208 Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 +GK L +KY ++LL + + I++D S++ +M +I++DL L I+HD+F SE + + Sbjct: 209 EIGKLLYEKYGTDLLEMSFVRKMKIIRDVSLEYLMNLIKEDLALLGIEHDVFTSEAELLK 268 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 + + + L + +Y G+L PK Q R Q+LF+ST GDDVDR L K Sbjct: 269 NNI--VEKCVKLLEDKQLIYYGVLEQPKGTEMQNWK-PRTQMLFKSTDFGDDVDRALQKV 325 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387 DGS+TYFA D+AY K RGF +MI +GSDH GYVKRL+A A+S A +++ L Sbjct: 326 DGSWTYFANDIAYHFDKISRGFQHMILELGSDHIGYVKRLKAAVKALSNNNATVDIKLHN 385 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 V DG+ +KMSKR+G+F+T+R V+++VG D VRFMML RK+ +LDFDF KV EQSK Sbjct: 386 TVNFLDDGVQVKMSKRSGEFLTIRDVIEKVGKDVVRFMMLTRKSDVVLDFDFAKVVEQSK 445 Query: 448 ENPVFYVQYAYARCRSIFRQAKDIF--PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 NP+FYVQYA+AR S+ R A +I D DF + E+ LI LA++ Sbjct: 446 NNPIFYVQYAHARVCSLMRNAPNILGIEDTDFSVLS----------SKEEILLIKLLAKW 495 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 P V+E + EP+++ FYL ++A FH W +G +N RF+ N+ LT R+ L + Sbjct: 496 PNVVEMSAKTAEPHRITFYLIEVAEAFHVLWGYGNKNANRRFIIDNDVNLTSARIYLAKS 555 Query: 566 VASIINSGLNIIGVESPNEM 585 VA II+SGL I + EM Sbjct: 556 VAYIISSGLKIFSIVPLEEM 575 >gi|73667116|ref|YP_303132.1| arginyl-tRNA synthetase [Ehrlichia canis str. Jake] gi|109894989|sp|Q3YRX1|SYR_EHRCJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|72394257|gb|AAZ68534.1| arginyl-tRNA synthetase [Ehrlichia canis str. Jake] Length = 576 Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust. Identities = 241/560 (43%), Positives = 351/560 (62%), Gaps = 16/560 (2%) Query: 28 ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87 IL ++V++ P + +G L TNAA+ILS+ + DPL +AE+++ + ++ ++ + G Sbjct: 30 ILSKLVVDYPNNHDYGDLYTNAALILSKYVKKDPLDVAEILLRELSNIKEISNISVVKPG 89 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FIN LS +++SSI + ++ IG G KVNIEFVSANPTGPMH+GH R A+ G Sbjct: 90 FINFNLSLYVWYEVISSINMLKEDFANVNIGNGRKVNIEFVSANPTGPMHIGHARGAIFG 149 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D LA+L+ GY+V REYYINDAG QI+ L SV+ RY++A D + G YPG+YLK Sbjct: 150 DVLANLLTKVGYQVVREYYINDAGTQIDVLVESVYLRYKEAA-GQDIVIGSGLYPGLYLK 208 Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 +G+ L +KY ++LL + + I++D S++ ++ +I+ DL L I+HD+F SE + R Sbjct: 209 EIGQLLYEKYGTDLLEMNSAQKMKIIRDISLKHLLDLIKQDLVLLGIKHDVFTSEAELLR 268 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 + + + L + +Y G+L PK T RKQ+LF+ST GDDVDR L K Sbjct: 269 NNV--VEKCVKLLEDKKLIYYGVLDQPKG-TENNNWQPRKQMLFKSTDFGDDVDRALQKV 325 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387 DGS+TYFA+D+AY K RGF +MI +GSDH GYVKRL+A A+S+ A I++ L Sbjct: 326 DGSWTYFASDIAYHFDKISRGFQHMILELGSDHIGYVKRLKAAVKALSDNTATIDIKLHN 385 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 +V +G+ +KMSKR+G+F+T++ V++EVG D VRF+ML RK+ +LDFDF KV EQSK Sbjct: 386 IVNFLNNGVQVKMSKRSGEFLTIKDVIEEVGIDVVRFIMLTRKSDAVLDFDFVKVVEQSK 445 Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFP--DLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 NP+FYVQYA+AR S+ R A +I D DF + E+ LI LA++ Sbjct: 446 NNPIFYVQYAHARVCSLMRNAPNILKIEDTDFSVLS----------SKEEILLIKLLAKW 495 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 VIE + EP+++ FYL ++A FH W +G ++ RF+ ++ LT R+ L A Sbjct: 496 SNVIELSAKTAEPHRITFYLIEVAETFHMLWGYGNKDVNRRFIIDDDINLTSARIYLARA 555 Query: 566 VASIINSGLNIIGVESPNEM 585 VA +I+SGL I + EM Sbjct: 556 VAYVISSGLKIFSIVPLEEM 575 >gi|269958746|ref|YP_003328533.1| arginyl-tRNA synthetase [Anaplasma centrale str. Israel] gi|269848575|gb|ACZ49219.1| arginyl-tRNA synthetase [Anaplasma centrale str. Israel] Length = 593 Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust. Identities = 237/583 (40%), Positives = 354/583 (60%), Gaps = 14/583 (2%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 LF +F + + E+ +V +L ++++ P + HG + TNAA+++ + +P+ Sbjct: 24 LFGNFRCIVIQKIGEL-WGSEVTDSLLHKLIVAPPTEDRHGDVYTNAALVVGKFKRKNPM 82 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 IAE + + VDSV + GF+NL S + I +G +YG +G+G K Sbjct: 83 EIAEHLRQALAEVEGVDSVDVVPPGFVNLKCSNEVWYSAIRDINKAGKDYGAVNLGQGQK 142 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VN+EFVSANPTGP+H+GH R AV GD L++L+A+ GY+VTREYY+NDAG QINTL SV+ Sbjct: 143 VNVEFVSANPTGPLHIGHARGAVFGDVLSNLLAWVGYDVTREYYVNDAGGQINTLVESVY 202 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 RY++AL + EG YPG YLK + K L +K+ +LL E +++++++++++ Sbjct: 203 LRYKEAL-GEQVTIGEGLYPGEYLKPIAKALVEKHGDKLL--ASEDRTAVIREFALKSIL 259 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 +IR+D+ L ++HD+F E D R + ++ L ++G +Y G L P+ + Sbjct: 260 DLIREDMALLGVKHDVFTYEADLQR--SRTVEKCVEFLQQKGMLYYGTLERPRGVEEEAA 317 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 R+QLLFRST GDD DR L K DGS+TYFA D+AY K RGF +MI +G DH G Sbjct: 318 WQAREQLLFRSTDFGDDSDRALQKEDGSWTYFAGDIAYHFDKISRGFHDMILGLGFDHKG 377 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 YV RL+A A+S+ KA I+V L +V +G+P+KMSKR G+F+T R VV+EVG D Sbjct: 378 YVSRLKAAVHALSDGKATIDVKLHNMVNFLENGVPVKMSKRRGEFLTARDVVEEVGKDVA 437 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 RF+M+ RKN +LDFDF K KEQSK++ +FY+QYA+AR S+ R A + P D D Sbjct: 438 RFIMMTRKNDVVLDFDFAKAKEQSKDSQIFYIQYAHARACSLMRNAPTLLPIEDVDFSRV 497 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 + P E+ LI L +P ++E++ + EP+++AFYL ++A FH W HG + Sbjct: 498 SSAP--------EIALIKLLVRWPNIVESSAVNHEPHRIAFYLLEVAEAFHVLWGHGSRS 549 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +RF+ + T R+ LV VA +I+ GL+I + EM Sbjct: 550 VDMRFIVEGDIATTSARIYLVKVVALVISLGLSIFSIAPMEEM 592 >gi|56416837|ref|YP_153911.1| arginyl-tRNA synthetase [Anaplasma marginale str. St. Maries] gi|255003182|ref|ZP_05278146.1| arginyl-tRNA synthetase [Anaplasma marginale str. Puerto Rico] gi|255004313|ref|ZP_05279114.1| arginyl-tRNA synthetase [Anaplasma marginale str. Virginia] gi|81359057|sp|Q5PAM4|SYR_ANAMM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|56388069|gb|AAV86656.1| arginyl-tRNA synthetase [Anaplasma marginale str. St. Maries] Length = 579 Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust. Identities = 237/583 (40%), Positives = 354/583 (60%), Gaps = 14/583 (2%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 LF +F + + E+ +V +L ++++ P + HG + TNAA+++ + +P+ Sbjct: 10 LFGNFRCIVIQKIGEL-WGGEVTDSLLHKLIVAPPTEDRHGDVYTNAALVVGKFKRKNPM 68 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 IAE + + VDSV + GF+NL S + I +G +YG +G+G K Sbjct: 69 EIAEHLRQALAEVEGVDSVDVVPPGFVNLKCSNEVWYSAIRDINKAGKDYGAVNLGQGQK 128 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VN+EFVSANPTGP+H+GH R AV GD L++L+A+ GY+VTREYY+NDAG QINTL SV+ Sbjct: 129 VNVEFVSANPTGPLHIGHARGAVFGDVLSNLLAWVGYDVTREYYVNDAGGQINTLVESVY 188 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 RY++AL + EG YPG YLK + K L +K+ +LL E +++++++++++ Sbjct: 189 LRYKEAL-GEQVTIGEGLYPGEYLKPIAKALVEKHGDKLL--ASEDRTAVIREFALKSIL 245 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 +IR+D+ L ++HD+F E D R + ++ L ++G +Y G L P+ + Sbjct: 246 DLIREDMALLGVKHDVFTYEADLQR--SRTVEKCVEFLQQKGMLYYGTLERPRGVEEEAA 303 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 R+QLLFRST GDD DR L K DGS+TYFA D+AY K RGF +MI +G DH G Sbjct: 304 WQAREQLLFRSTDFGDDSDRALQKEDGSWTYFAGDIAYHFDKISRGFHDMILGLGFDHKG 363 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 YV RL+A A+S+ KA I+V L +V +G+P+KMSKR G+F+T R VV+EVG D Sbjct: 364 YVSRLKAAVHALSDGKATIDVKLHNMVNFLENGVPVKMSKRRGEFLTARDVVEEVGKDVA 423 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 RF+M+ RKN +LDFDF K KEQSK++ +FY+QYA+AR S+ R A + P D D Sbjct: 424 RFIMMTRKNDVVLDFDFAKAKEQSKDSQIFYIQYAHARACSLMRNAPTLLPIEDVDFSRV 483 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 + P E+ LI L +P ++E++ + EP+++AFYL ++A FH W HG + Sbjct: 484 SSAP--------EIALIKLLVRWPNIVESSAVNHEPHRIAFYLLEVAEAFHVLWGHGSRS 535 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +RF+ + T R+ LV VA +I+ GL+I + EM Sbjct: 536 VDMRFIVEGDIATTSARIYLVKVVALVISLGLSIFSIAPMEEM 578 >gi|222475202|ref|YP_002563618.1| arginyl-tRNA synthetase (argS) [Anaplasma marginale str. Florida] gi|222419339|gb|ACM49362.1| arginyl-tRNA synthetase (argS) [Anaplasma marginale str. Florida] Length = 593 Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust. Identities = 237/583 (40%), Positives = 354/583 (60%), Gaps = 14/583 (2%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 LF +F + + E+ +V +L ++++ P + HG + TNAA+++ + +P+ Sbjct: 24 LFGNFRCIVIQKIGEL-WGGEVTDSLLHKLIVAPPTEDRHGDVYTNAALVVGKFKRKNPM 82 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 IAE + + VDSV + GF+NL S + I +G +YG +G+G K Sbjct: 83 EIAEHLRQALAEVEGVDSVDVVPPGFVNLKCSNEVWYSAIRDINKAGKDYGAVNLGQGQK 142 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VN+EFVSANPTGP+H+GH R AV GD L++L+A+ GY+VTREYY+NDAG QINTL SV+ Sbjct: 143 VNVEFVSANPTGPLHIGHARGAVFGDVLSNLLAWVGYDVTREYYVNDAGGQINTLVESVY 202 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 RY++AL + EG YPG YLK + K L +K+ +LL E +++++++++++ Sbjct: 203 LRYKEAL-GEQVTIGEGLYPGEYLKPIAKALVEKHGDKLL--ASEDRTAVIREFALKSIL 259 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 +IR+D+ L ++HD+F E D R + ++ L ++G +Y G L P+ + Sbjct: 260 DLIREDMALLGVKHDVFTYEADLQR--SRTVEKCVEFLQQKGMLYYGTLERPRGVEEEAA 317 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 R+QLLFRST GDD DR L K DGS+TYFA D+AY K RGF +MI +G DH G Sbjct: 318 WQAREQLLFRSTDFGDDSDRALQKEDGSWTYFAGDIAYHFDKISRGFHDMILGLGFDHKG 377 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 YV RL+A A+S+ KA I+V L +V +G+P+KMSKR G+F+T R VV+EVG D Sbjct: 378 YVSRLKAAVHALSDGKATIDVKLHNMVNFLENGVPVKMSKRRGEFLTARDVVEEVGKDVA 437 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 RF+M+ RKN +LDFDF K KEQSK++ +FY+QYA+AR S+ R A + P D D Sbjct: 438 RFIMMTRKNDVVLDFDFAKAKEQSKDSQIFYIQYAHARACSLMRNAPTLLPIEDVDFSRV 497 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 + P E+ LI L +P ++E++ + EP+++AFYL ++A FH W HG + Sbjct: 498 SSAP--------EIALIKLLVRWPNIVESSAVNHEPHRIAFYLLEVAEAFHVLWGHGSRS 549 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +RF+ + T R+ LV VA +I+ GL+I + EM Sbjct: 550 VDMRFIVEGDIATTSARIYLVKVVALVISLGLSIFSIAPMEEM 592 >gi|189183882|ref|YP_001937667.1| arginyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda] gi|238692015|sp|B3CST6|SYR_ORITI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|189180653|dbj|BAG40433.1| arginyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda] Length = 590 Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust. Identities = 238/553 (43%), Positives = 352/553 (63%), Gaps = 13/553 (2%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 IV+E +D +STN AM++++ + + +T+A L ++ P + ++ IAG GFIN Sbjct: 40 IVLESSKDVNSYDISTNIAMLIAKKMNQNSITLANLFKKKLSHYPYIANITIAGPGFINF 99 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + L+ I+ + IG KVNIE+VSANPTGP+H+GH R AV GD LA Sbjct: 100 VILQEAWTNYLAIILDGSYRKEYSSIGNNKKVNIEYVSANPTGPLHIGHARAAVYGDVLA 159 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +L+ +GY+VTREYY+ND G QI+ L+ SV+ RY+QA+ +D+P+G YPG YL VG Sbjct: 160 TLLQCTGYQVTREYYVNDTGVQIDNLSKSVYLRYKQAITGQAADIPKGLYPGEYLISVGT 219 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 LA++Y +LL E ++L I+KD +V +++ I+ DL + ++HD+F SE H D + Sbjct: 220 NLAEEYGDKLLTLSEPEYLNIIKDVAVNNLLQSIKADLALIGVRHDVFFSEKKLH--DSN 277 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 I +ID L+ + VY G L PK +++ R QLLF+ST+ GDD DRPL K DGS+ Sbjct: 278 VISKVIDLLSVKKLVYTGKLSQPKGQSSDNW-QPRSQLLFKSTIFGDDQDRPLQKEDGSW 336 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV-SEKKAQINVLLCELVR 390 +YFA+D+AY K +RGFD +I+++G+DH GYV R++A+ A+ S + +++ +C+LV+ Sbjct: 337 SYFASDIAYADNKIKRGFDYVIFILGADHIGYVSRIKAIIQALDSNQDVTLDIKICQLVK 396 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L DG+ +KMSKR+G F T+R V + VG D +RF ML RKN+ +LDFD K++EQS++NP Sbjct: 397 LIEDGVAVKMSKRSGSFTTIRDVYETVGKDVIRFFMLTRKNNAVLDFDLVKLQEQSRDNP 456 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD----TSELQLIVHLAEYP 506 VFYVQYAY R SI R+AKD ++ +++F N +S+F EL LI LA + Sbjct: 457 VFYVQYAYVRAGSILRKAKD-NANIAYEIFSTN----KSDFSLLSTKEELNLIKILAVWS 511 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 +++ A EP+++A YL LA+ FH W+ + RF+ N+ LT RL L AV Sbjct: 512 HMLDGAVKNFEPHRIAIYLQKLAAEFHALWNLKSRDLDYRFIVLNDNNLTAARLALATAV 571 Query: 567 ASIINSGLNIIGV 579 II GL IIG+ Sbjct: 572 REIIREGLKIIGI 584 >gi|58697380|ref|ZP_00372706.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila simulans] gi|58536220|gb|EAL59776.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila simulans] Length = 494 Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust. Identities = 235/508 (46%), Positives = 328/508 (64%), Gaps = 17/508 (3%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P + AHG + TN AM+L++ +P+ IAE++ ++ +V V IAG GFIN++ Sbjct: 4 IVEPPSNRAHGDIYTNVAMVLAKHEKKNPIEIAEVLAKEFELFDEVAKVEIAGPGFINIH 63 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L IL I E+G IG +N+EFVSANPTGP+H+GH R AV GD LA+ Sbjct: 64 LKIKVWHGILKQINELKTEFGTLDIGNNQAINVEFVSANPTGPLHIGHARGAVFGDVLAN 123 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 L+ GY+VT+EYYINDAGAQI+TL SV+ RY++AL S + +G YPG YLK +G+ Sbjct: 124 LLKKVGYKVTKEYYINDAGAQIDTLIKSVYLRYKEALGEKIS-IEKGLYPGEYLKPIGEG 182 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 LA KY E L + + I+++Y++ ++++I++D+ L + HD+F SE + + Sbjct: 183 LAKKYGKEFLKKQDNQ---IIREYTLSFILELIKEDMNLLGVNHDVFTSEYELQK--SGK 237 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 I + I L+ +G VYEG L PK K ++ RK++LFRST GDDVDR L K GS+T Sbjct: 238 IEESIKILSDKGLVYEGYLEKPKGKESENW-TSRKEMLFRSTKFGDDVDRALKKDGGSWT 296 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 YFA+D+AY K RGF+NMI +GSDH GYVKRL+AV +A+S+ +A+I V L +V + Sbjct: 297 YFASDIAYHFDKISRGFNNMIVELGSDHGGYVKRLKAVVSALSDDQAKIEVKLHNIVNFF 356 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 +G P+KMSKR+G+F+T R VV+EVG D RF+ML RKN +LDFDF KVKEQSK+NP+F Sbjct: 357 ENGKPVKMSKRSGNFLTARDVVEEVGRDITRFIMLTRKNDMVLDFDFAKVKEQSKDNPIF 416 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 YVQYA+AR S+ R A P D L EL LI LA++P V+E A Sbjct: 417 YVQYAHARAHSLMRNAPKELPTADPSLLRTG----------GELFLIKTLAKWPDVVEIA 466 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGR 540 EP+++ FYL ++A FH W +G+ Sbjct: 467 ARLCEPHRITFYLLEVAEAFHVLWGYGK 494 >gi|88607168|ref|YP_505281.1| arginyl-tRNA synthetase [Anaplasma phagocytophilum HZ] gi|109894971|sp|Q2GK20|SYR_ANAPZ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|88598231|gb|ABD43701.1| arginyl-tRNA synthetase [Anaplasma phagocytophilum HZ] Length = 580 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 233/585 (39%), Positives = 357/585 (61%), Gaps = 17/585 (2%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 +F F + ++ ++ + + + + RI++ P HG L TNAA+IL + +P+ Sbjct: 10 IFGFFRNAIEERIRAVWSGDNIPESLFKRIIVGPPAQPKHGDLYTNAALILGKFDKKNPM 69 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +A + + ++S+ + GFIN + S ++ +I G EYGR +G K Sbjct: 70 ELASTLCNAFENIEGIESINVVAPGFINFHCVNSVWHGVVRNINKLGREYGRTDLGHNKK 129 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VNIEFVSANPTGP+H+GH R AV GD L++L+ + GY+V +EYY+NDAG+Q+ TL SVF Sbjct: 130 VNIEFVSANPTGPLHIGHARGAVFGDVLSNLLKWVGYDVIKEYYVNDAGSQVKTLVSSVF 189 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 RY++AL + + G YPG YLK + ++L +KY S+LLN ++ I++ +++ +M+ Sbjct: 190 LRYKEAL-GEEITIGAGLYPGEYLKPIARDLVEKYGSDLLNASDKD--EIIRSFTLSSML 246 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 +I++DL L ++HD+F+SE D + + I + + L +G +YEG+L PK + Sbjct: 247 NLIKEDLALLGVEHDVFVSESDLQ--NRNVIEECVKYLRERGIIYEGVLEKPKREDELSE 304 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 R Q+LF+ST GDD DR L K DG+++YFA D+ Y K RGFD+MI +G DH G Sbjct: 305 WQPRVQMLFKSTEFGDDSDRALQKEDGTWSYFAGDIGYHFHKISRGFDSMIMTLGFDHKG 364 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 YV RL+A AA+S KA I++ L LV +G P+KMSKR G+F+T+R V+DEVG D Sbjct: 365 YVSRLKAAVAALSNGKASIDIKLYNLVNFLENGTPVKMSKRKGEFLTVRDVIDEVGRDVA 424 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP--DLDFDLF 480 RFMML R+N +LDFDF K +E+SK++ +FY+QYA+AR RSI R+ ++ +DF Sbjct: 425 RFMMLTRRNDVVLDFDFAKAREESKDSQIFYIQYAHARIRSIVRRCPELLAIEKIDFSC- 483 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 VI ++ EL L+ L+ +P VI+ + EP+ +AFYL ++A FH W G Sbjct: 484 ---VITEQ------ELSLLRLLSRWPSVIKTSAENYEPHTIAFYLIEVAEAFHALWGCGN 534 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +P +RF+ + T R+ + AV+ +I SGL+I + EM Sbjct: 535 SDPSMRFIVEGDLHTTSARIYIAIAVSHVIASGLDIFSITPSEEM 579 >gi|57239219|ref|YP_180355.1| arginyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] gi|58579177|ref|YP_197389.1| arginyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] gi|81352891|sp|Q5HB39|SYR_EHRRW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|57161298|emb|CAH58219.1| arginyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] gi|58417803|emb|CAI27007.1| Arginyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] Length = 576 Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust. Identities = 243/575 (42%), Positives = 355/575 (61%), Gaps = 14/575 (2%) Query: 12 KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVAR 71 K ++ ID + + IL +++++ P + HG L TNAA+ILS+ + +P+ IA+++V Sbjct: 14 KLHVLNIDNFVVTNESILAKLIVDYPNNPDHGDLYTNAALILSKYIKKNPMDIAKILVDE 73 Query: 72 IKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131 ++ + + GFIN +S +I+ SI ++G G G +VNIEFVSAN Sbjct: 74 FSSIKEISDINVVKPGFINFNISLDVWYEIIISINRLKEKFGHVNFGNGKRVNIEFVSAN 133 Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 PTGPMH+GH R A+ GD LA+L+ GYEV REYYINDAGAQI+ L SV+ RY++ L Sbjct: 134 PTGPMHIGHARGAIFGDVLANLLERVGYEVVREYYINDAGAQIDVLVESVYLRYKEVLGE 193 Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251 N + G YPG+YLK +GK L +Y S LL + I++D S+ +MK+I++DL Sbjct: 194 NIV-IGSGLYPGLYLKDIGKLLYQEYDSGLLGMDYSQRRRIIRDVSLMYLMKLIKEDLAL 252 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD-RKQLL 310 L I+HDIF SE + + ++ ++ L + +Y G L PK T+ + R Q+L Sbjct: 253 LGIKHDIFTSESQLQKDNI--VQKCVELLQEKQLIYYGTLDQPKG--TEGINWKPRTQML 308 Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 F+ST GDDVDR L K+DGS+TYFA D+AY K RGF +MI +GSDH GYVKRL+A Sbjct: 309 FKSTDFGDDVDRALQKADGSWTYFANDIAYHFYKISRGFQHMILELGSDHIGYVKRLKAA 368 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430 A+S+ A I++ L +V +G +KMSKR+G+F+T++ V+++VG D VRF+ML RK Sbjct: 369 VKALSDGNATIDIKLHSIVNFLDNGAQVKMSKRSGEFLTIKDVIEKVGKDVVRFIMLTRK 428 Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490 + +LDFDF KV EQSK NPVFYVQYA+AR S+ R A I L+ +L +V+ + Sbjct: 429 SDVVLDFDFAKVVEQSKNNPVFYVQYAHARVHSLIRNAPKI---LEIELVDFSVLSSK-- 483 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550 E+ LI LA++ ++E + EP+++ FYL ++A FH W +G ++ +RF+ Sbjct: 484 ---EEILLIKLLAKWQDIVEISAKTAEPHRITFYLIEIAEAFHALWGYGNKSTDMRFIVD 540 Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 NN LT R+ L +V +I SGL I + EM Sbjct: 541 NNINLTSARIYLAKSVGYVIASGLTIFSIVPLTEM 575 >gi|58617231|ref|YP_196430.1| arginyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel] gi|58416843|emb|CAI27956.1| Arginyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel] Length = 601 Score = 445 bits (1145), Expect = e-123, Method: Compositional matrix adjust. Identities = 242/575 (42%), Positives = 355/575 (61%), Gaps = 14/575 (2%) Query: 12 KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVAR 71 K ++ ID + + IL +++++ P + HG L TNAA+ILS+ + +P+ IA+++V Sbjct: 39 KLHVLNIDNFVVTNESILAKLIVDYPNNPDHGDLYTNAALILSKYIKKNPMDIAKILVDE 98 Query: 72 IKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131 ++ + + GFIN +S +I+ SI ++G G G +VNIEFVSAN Sbjct: 99 FSSIKEISDINVVKPGFINFNISLDVWYEIIISINRLKEKFGHVNFGNGKRVNIEFVSAN 158 Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 PTGPMH+GH R A+ GD LA+L+ GYEV REYYINDAGAQ++ L SV+ RY++ L Sbjct: 159 PTGPMHIGHARGAIFGDVLANLLERVGYEVVREYYINDAGAQVDVLVESVYLRYKEVLGE 218 Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251 N + G YPG+YLK +GK L +Y S LL + I++D S+ +MK+I++DL Sbjct: 219 NIV-IGSGLYPGLYLKDIGKLLYQEYGSGLLGMDYSQRRRIIRDVSLMYLMKLIKEDLAL 277 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD-RKQLL 310 L I+HDIF SE + + ++ ++ L + +Y G L PK T+ + R Q+L Sbjct: 278 LGIKHDIFTSESQLQKDNI--VQKCVELLQEKQLIYYGTLDQPKG--TEGINWKPRTQML 333 Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 F+ST GDDVDR L K+DGS+TYFA D+AY K RGF +MI +GSDH GYVKRL+A Sbjct: 334 FKSTDFGDDVDRALQKADGSWTYFANDIAYHFYKISRGFQHMILELGSDHIGYVKRLKAA 393 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430 A+S+ A I++ L +V +G +KMSKR+G+F+T++ V+++VG D VRF+ML RK Sbjct: 394 VKALSDGNATIDIKLHSIVNFLDNGAQVKMSKRSGEFLTIKDVIEKVGKDVVRFIMLTRK 453 Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490 + +LDFDF KV EQSK NPVFYVQYA+AR S+ R A I L+ +L +V+ + Sbjct: 454 SDVVLDFDFAKVVEQSKNNPVFYVQYAHARVHSLIRNAPKI---LEIELVDFSVLSSK-- 508 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550 E+ LI LA++ ++E + EP+++ FYL ++A FH W +G ++ +RF+ Sbjct: 509 ---EEILLIKLLAKWQDIVEISAKTAEPHRITFYLIEVAEAFHALWGYGNKSTDMRFIVD 565 Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 NN LT R+ L +V +I SGL I + EM Sbjct: 566 NNINLTSARIYLAKSVGYVIASGLTIFSIVPLTEM 600 >gi|109894991|sp|Q5FH87|SYR_EHRRG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS Length = 576 Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust. Identities = 242/575 (42%), Positives = 355/575 (61%), Gaps = 14/575 (2%) Query: 12 KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVAR 71 K ++ ID + + IL +++++ P + HG L TNAA+ILS+ + +P+ IA+++V Sbjct: 14 KLHVLNIDNFVVTNESILAKLIVDYPNNPDHGDLYTNAALILSKYIKKNPMDIAKILVDE 73 Query: 72 IKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131 ++ + + GFIN +S +I+ SI ++G G G +VNIEFVSAN Sbjct: 74 FSSIKEISDINVVKPGFINFNISLDVWYEIIISINRLKEKFGHVNFGNGKRVNIEFVSAN 133 Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 PTGPMH+GH R A+ GD LA+L+ GYEV REYYINDAGAQ++ L SV+ RY++ L Sbjct: 134 PTGPMHIGHARGAIFGDVLANLLERVGYEVVREYYINDAGAQVDVLVESVYLRYKEVLGE 193 Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251 N + G YPG+YLK +GK L +Y S LL + I++D S+ +MK+I++DL Sbjct: 194 NIV-IGSGLYPGLYLKDIGKLLYQEYGSGLLGMDYSQRRRIIRDVSLMYLMKLIKEDLAL 252 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD-RKQLL 310 L I+HDIF SE + + ++ ++ L + +Y G L PK T+ + R Q+L Sbjct: 253 LGIKHDIFTSESQLQKDNI--VQKCVELLQEKQLIYYGTLDQPKG--TEGINWKPRTQML 308 Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 F+ST GDDVDR L K+DGS+TYFA D+AY K RGF +MI +GSDH GYVKRL+A Sbjct: 309 FKSTDFGDDVDRALQKADGSWTYFANDIAYHFYKISRGFQHMILELGSDHIGYVKRLKAA 368 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430 A+S+ A I++ L +V +G +KMSKR+G+F+T++ V+++VG D VRF+ML RK Sbjct: 369 VKALSDGNATIDIKLHSIVNFLDNGAQVKMSKRSGEFLTIKDVIEKVGKDVVRFIMLTRK 428 Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490 + +LDFDF KV EQSK NPVFYVQYA+AR S+ R A I L+ +L +V+ + Sbjct: 429 SDVVLDFDFAKVVEQSKNNPVFYVQYAHARVHSLIRNAPKI---LEIELVDFSVLSSK-- 483 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550 E+ LI LA++ ++E + EP+++ FYL ++A FH W +G ++ +RF+ Sbjct: 484 ---EEILLIKLLAKWQDIVEISAKTAEPHRITFYLIEVAEAFHALWGYGNKSTDMRFIVD 540 Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 NN LT R+ L +V +I SGL I + EM Sbjct: 541 NNINLTSARIYLAKSVGYVIASGLTIFSIVPLTEM 575 >gi|148284332|ref|YP_001248422.1| arginyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong] gi|166232817|sp|A5CD00|SYR_ORITB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|146739771|emb|CAM79637.1| arginyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong] Length = 590 Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust. Identities = 236/553 (42%), Positives = 351/553 (63%), Gaps = 13/553 (2%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 IV+E +D +STN AM++++ + + +T+A L ++ P +D++ IAG GFIN Sbjct: 40 IVLESSKDVNSYDISTNIAMLIAKKMNQNSITLANLFKKKLSHYPYIDNITIAGPGFINF 99 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + L+ I+ + IG KVNIE+VSANPTGP+H+GH R AV GD LA Sbjct: 100 VILQEEWTNYLAIILDGSYRKEYSSIGNNKKVNIEYVSANPTGPLHIGHARAAVYGDVLA 159 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +L+ +GY+VTREYY+ND G QI+ LA SV+ RY+Q + +D+P+G YPG YL VG Sbjct: 160 ALLQCTGYQVTREYYVNDTGVQIDNLAKSVYLRYKQVITGQVADIPKGLYPGEYLISVGT 219 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 +LA +Y +LL E ++L I+KD +V +++ I+ DL + ++HD+F SE H D + Sbjct: 220 KLAKEYGDKLLTLSEPEYLNIIKDVAVNNLLQSIKADLALIGVRHDVFFSEKKLH--DSN 277 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 I +ID L+ + VY G L PK +++ R QLLF+ST+ GD+ DRPL K DGS+ Sbjct: 278 VISKVIDLLSVKKLVYTGELSQPKGQSSDNW-QPRSQLLFKSTIFGDNQDRPLQKEDGSW 336 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCELVR 390 +YFA+D+AY K +RGFD +I+++G+DH GYV R++A+ A+ + +++ +C+LV+ Sbjct: 337 SYFASDIAYADNKIKRGFDYVIFILGADHIGYVSRIKAIIQALDFNQDITLDIKICQLVK 396 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L +G+ +KMSKR+G F T+R V + VG D +RF ML RKN+ +LDFD K++EQS++NP Sbjct: 397 LIENGVAVKMSKRSGSFTTIRDVYEIVGKDVIRFFMLTRKNNAVLDFDLVKLQEQSRDNP 456 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD----TSELQLIVHLAEYP 506 VFYVQYAY R SI R+AKD ++ +++F N +S+F EL LI LA + Sbjct: 457 VFYVQYAYVRAGSILRKAKD-NANIAYEIFSTN----KSDFSLLSTKEELNLIKILAVWS 511 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 +++ A EP+++A YL LA+ FH W+ + RF+ N+ LT RL L AV Sbjct: 512 HMLDGAVKNFEPHRIAIYLQKLAAEFHALWNLKSNDLDYRFIVLNDNNLTAARLALATAV 571 Query: 567 ASIINSGLNIIGV 579 II GL IIG+ Sbjct: 572 REIIREGLKIIGI 584 >gi|153005149|ref|YP_001379474.1| arginyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5] gi|166232753|sp|A7HCP4|SYR_ANADF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|152028722|gb|ABS26490.1| arginyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5] Length = 605 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 233/573 (40%), Positives = 346/573 (60%), Gaps = 32/573 (5%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDP--DVDSVFIAGKGFIN 90 +E PRD HG + NAAM+L++ G P +A+ I A ++ +D ++ + +AG GFIN Sbjct: 32 VEAPRDPKHGDFAVNAAMVLAKAAGKPPRDLAQAIAAEVRAVDAQHEIAGLEVAGPGFIN 91 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + L+P + L +V G YGR +G+G KV +E+VSANPTGPMHVGH R AVVGD + Sbjct: 92 VRLAPDVWLRALGRVVAEGTAYGRTEVGRGKKVIVEYVSANPTGPMHVGHGRNAVVGDGV 151 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 SL+ ++G+EVTREYY+ND GAQ+ TLA SV RYQ+ L+ +P YPG Y+K V Sbjct: 152 QSLLRWAGFEVTREYYVNDYGAQVQTLARSVHLRYQE-LFGRQVTMPPKSYPGEYVKDVA 210 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 L ++ L+ PE +WL + +D +V+ ++ +IR+DL+A+NI+ D + SE + + Sbjct: 211 AALKAEHGDRWLDAPEAEWLALFRDRAVEHVLGLIREDLRAVNIEFDRWYSEKALY--ES 268 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKC----------DMDRKQL-------LFRS 313 + + LA + VY G LPPPKSK Q D+ + + LFRS Sbjct: 269 GTVDRFLRFLAEKDLVYVGKLPPPKSKKGQPAPAQAASNSAHDLGEEGIAASDDLTLFRS 328 Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373 + GD+VDRP+ K+DG+ TYF AD+AY K +R D ++ V+G+DH GYV RLEA A Sbjct: 329 SQYGDEVDRPVKKADGTTTYFCADIAYHWDKRQRA-DALVDVLGADHGGYVPRLEAALEA 387 Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433 + + ++V+L ++V L R G +KMSKRAG ++LR VVDEVG D+ RF+ L R++ Sbjct: 388 LGASRKDLHVVLIQMVNLTRGGEAVKMSKRAGTVVSLREVVDEVGRDATRFIFLTRRSDA 447 Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPRNVIPQESEFD 492 LDFD K Q+ +NPVFYVQY +AR IF +A++ P +FDL + E D Sbjct: 448 QLDFDIELAKRQTLDNPVFYVQYGHARLAQIFAKAREAGAPVPEFDLEAARTLTSAEEQD 507 Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552 LI + +P ++ A +A EP+++AFYL + + FH +++ G+ R + A+ Sbjct: 508 -----LIRRIVAFPDMLAAAALAYEPHRVAFYLQETIAAFHSYYTQGKRTGE-RVISADA 561 Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 RK T RL L A+ ++ +GL ++GV +P M Sbjct: 562 RK-TAGRLFLCRALKQVLANGLGLLGVAAPERM 593 >gi|114778709|ref|ZP_01453521.1| arginyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1] gi|114551071|gb|EAU53633.1| arginyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1] Length = 576 Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust. Identities = 245/566 (43%), Positives = 331/566 (58%), Gaps = 33/566 (5%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V+ RP++ HG + N AM L+R L P IA I+A + V++ +AG GFIN+ Sbjct: 32 VVLTRPKEKEHGDYAANVAMPLARVLKQSPQQIAANILAAVVWPDAVEAADVAGPGFINI 91 Query: 92 YLSPSYLRKILSSIVVSGIEYGR-NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 L + +L +I+ EYGR TKVN+EFVSANPTGPMHVGH R AVVGD L Sbjct: 92 RLKKASEANVLKTIIQQAEEYGRVAAAADATKVNLEFVSANPTGPMHVGHGRGAVVGDAL 151 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+L+A +G V REYYINDAGAQI LA SV+ R ++ L + PE YPG Y+ + Sbjct: 152 ANLLAATGNHVQREYYINDAGAQIGVLAGSVWLRMRE-LNGEQIEFPESAYPGEYIVQIA 210 Query: 211 KE-LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 E LA LL E+ L ++ ++ A M +IRDDL A+ I D++ SE H + Sbjct: 211 TEVLAAHDYKTLLAMDEDARLALIGQLAIDANMAMIRDDLNAIGIHFDLYFSEQSLH--N 268 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + ++I+ L G VY G LPPPK K + LLFR+T GDDVDRPL K DG Sbjct: 269 SGRVNELIERLQADGVVYRGTLPPPKGKEVSDY-QPVEHLLFRTTDFGDDVDRPLAKQDG 327 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA----QINVLL 385 + TYFAAD+AY K+ RGFD MI V G+DH GYV R++A A+ E +A Q +V+L Sbjct: 328 TATYFAADIAYHYDKHLRGFDRMIDVWGADHGGYVTRVQAAMKALIEPEAASAAQPDVIL 387 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 ++V L RDG+P+KMSKRAG F+TLR VVDEVG D+VRF + R+ LDFD K+Q Sbjct: 388 VQMVNLTRDGVPVKMSKRAGTFVTLREVVDEVGRDAVRFNFMTRRVESQLDFDLEAAKKQ 447 Query: 446 SKENPVFYVQYAYARCRSIFRQAKD------IFPDLDFDLFPRNVIPQESEFDTSELQLI 499 + ENPV+YVQYA+AR +I R+A D D+D + + E +L+ Sbjct: 448 NDENPVYYVQYAHARIAAILRKASDEGVVVGEIDDVDLSVLTSH----------EEQRLV 497 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 HL YP + A E Y++A Y LA+ FH + R V ++ LT+ R Sbjct: 498 AHLLAYPEALLRAADRLEAYRVATYAMRLAADFHSFYHKHR-------VVTDDNNLTVAR 550 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 + L+ AVA +I + L I+GV +P+ M Sbjct: 551 MLLIRAVAQVITNALGILGVSAPDRM 576 >gi|197122748|ref|YP_002134699.1| arginyl-tRNA synthetase [Anaeromyxobacter sp. K] gi|238689865|sp|B4UEJ9|SYR_ANASK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|196172597|gb|ACG73570.1| arginyl-tRNA synthetase [Anaeromyxobacter sp. K] Length = 598 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 229/568 (40%), Positives = 342/568 (60%), Gaps = 29/568 (5%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK---IDPDVDSVFIAGKGFIN 90 +E PRD HG + NAAM+L++ G P +A+ IV ++ D+ + IAG GFIN Sbjct: 32 VEAPRDPKHGDFAVNAAMVLAKQAGRPPRELAQAIVEAVRAADTAGDLAGLEIAGPGFIN 91 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + LSP + L+ V G +YGR +G+G KV +E+VSANPTGPMHVGH R AVVGD + Sbjct: 92 VRLSPDLWLRTLARAVAEGPDYGRTAVGQGKKVIVEYVSANPTGPMHVGHGRNAVVGDGV 151 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 L+ ++G++VTREYY+ND GAQ+ TLA SV RYQ+ L+ +P YPG Y+K + Sbjct: 152 QGLLRWAGFDVTREYYVNDYGAQVQTLARSVHLRYQE-LHGRTVTMPPKSYPGEYVKDIA 210 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 L +Y + L+ PE +WL + +D++VQ ++ +IR DL A+NI D + SE + + Sbjct: 211 AGLKAEYGARFLDAPEAEWLTLFRDHAVQHVLGMIRGDLAAVNISFDRWSSEKALY--ES 268 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ----------LLFRSTMVGDDV 320 + + L + VY G LPPPKSK Q + LFRS+ GD+V Sbjct: 269 GTVDRFLRFLEEKDLVYVGKLPPPKSKKGQPPAQPQPDEEGVTAAEDLTLFRSSAYGDEV 328 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DRP+ K+DG+ TYF AD+AY K +R D ++ V+G+DH GYV RLEA A+ + Sbjct: 329 DRPVKKADGTPTYFCADIAYHWDKRQRA-DALVDVLGADHGGYVPRLEAAMEALGASRKD 387 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 ++V+L ++V L R G +KMSKRAG ++LR VVDEVG D+ RF+ L R++ LDFD Sbjct: 388 LHVVLIQMVSLMRGGESVKMSKRAGTLVSLREVVDEVGRDATRFIFLTRRSDAPLDFDVE 447 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQ 497 K Q+ +NPVFYVQY +AR +IF++A++ PD D + P+E + Sbjct: 448 LAKRQTLDNPVFYVQYGHARLAAIFQKAREAGHAVPDFDLEAARTLASPEEQD------- 500 Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557 LI +A +P ++ A +A EP+++AFYL + + FH ++ G+++ + + + K T Sbjct: 501 LIRRIAAFPDMLAAAALAYEPHRVAFYLQETIAAFHSWYTQGKKSGE-KVIGPDPVK-TA 558 Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L A+ ++ +GL ++GV +P+ M Sbjct: 559 ARLFLCRALKQVLANGLAVLGVSAPDRM 586 >gi|220917531|ref|YP_002492835.1| arginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1] gi|254782939|sp|B8JBE2|SYR_ANAD2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|219955385|gb|ACL65769.1| arginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1] Length = 598 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 229/568 (40%), Positives = 341/568 (60%), Gaps = 29/568 (5%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK---IDPDVDSVFIAGKGFIN 90 +E PRD HG + NAAM+L++ G P +A+ IV ++ D+ + IAG GFIN Sbjct: 32 VEAPRDPKHGDFAVNAAMVLAKQAGRPPRELAQAIVEAVRAADTAGDLAGLEIAGPGFIN 91 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + LSP + L+ V G +YGR +G+G KV +E+VSANPTGPMHVGH R AVVGD + Sbjct: 92 VRLSPDLWLRTLARAVAEGPDYGRTAVGQGKKVIVEYVSANPTGPMHVGHGRNAVVGDGV 151 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 L+ ++G++VTREYY+ND GAQ+ TLA SV RYQ+ L+ +P YPG Y+K + Sbjct: 152 QGLLRWAGFDVTREYYVNDYGAQVQTLARSVHLRYQE-LHGRTVTMPPKSYPGEYVKDIA 210 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 L +Y + L+ PE +WL + +D+SVQ ++ +IR DL A+NI D + SE + + Sbjct: 211 AGLKAEYGARFLDAPEAEWLTLFRDHSVQHVLGMIRGDLAAVNISFDRWSSEKALY--ES 268 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKT----------TQKCDMDRKQLLFRSTMVGDDV 320 + + L + VY G LPPPKSK + LFRS+ GD+V Sbjct: 269 GTVDRFLRFLEEKDLVYVGKLPPPKSKKGQPPPQPQPDEEGVTAAEDLTLFRSSAYGDEV 328 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DRP+ K+DG+ TYF AD+AY K +R D ++ V+G+DH GYV RLEA A+ + Sbjct: 329 DRPVKKADGTPTYFCADIAYHWDKRQRA-DALVDVLGADHGGYVPRLEAAMEALGASRKD 387 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 ++V+L ++V L R G +KMSKRAG ++LR VVDEVG D+ RF+ L R++ LDFD Sbjct: 388 LHVVLIQMVSLMRGGESVKMSKRAGTLVSLREVVDEVGRDATRFIFLTRRSDAPLDFDVE 447 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQ 497 K Q+ +NPVFYVQY +AR +IF++A++ PD D + P+E + Sbjct: 448 LAKRQTLDNPVFYVQYGHARLAAIFQKAREAGHAVPDFDLEAARTLASPEEQD------- 500 Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557 LI +A +P ++ A +A EP+++AFYL + + FH ++ G+++ + + + K T Sbjct: 501 LIRRIAAFPDMLAAAALAYEPHRVAFYLQETIAAFHSWYTQGKKSGE-KVIGPDPVK-TA 558 Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L A+ ++ +GL ++GV +P+ M Sbjct: 559 ARLFLCRALKQVLANGLAVLGVSAPDRM 586 >gi|330814070|ref|YP_004358309.1| arginyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063] gi|327487165|gb|AEA81570.1| arginyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063] Length = 566 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 240/564 (42%), Positives = 340/564 (60%), Gaps = 30/564 (5%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI----AELIVARIKIDPDVDSVFIAG 85 ++I +E P+ + G L+ NA +IL+ +PL I AELI + K ++D +A Sbjct: 25 EKISVEPPKQTSFGDLAFNAPLILAAEFKKNPLEIGSEIAELIKKKFKEFENID---VAK 81 Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 GFINL L ++ LS + + + K+NIE+VSANPTGP+HVGHCR AV Sbjct: 82 PGFINLKLKNNFWISYLSDFNT----HNKKISSSKKKINIEYVSANPTGPLHVGHCRGAV 137 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205 GD LA+L++F G +VT+EYYIND G QI+ + SVF R Q+ N L +G YPG Y Sbjct: 138 YGDVLANLLSFVGEDVTKEYYINDYGNQIHMFSKSVFARIQEIKENIKFPLDQGLYPGDY 197 Query: 206 LKHVGKEL-ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 L + + K +++ N+ EK + ++ M +I+ DL AL IQHD+FISE D Sbjct: 198 LIEIANNIIKKKLITDISNY--EKIKDQLGSAAMSEAMLMIKSDLLALGIQHDLFISEKD 255 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 D I I+ L ++ +YEG+L PK + + R QLLF+ST GDDVDR L Sbjct: 256 LVSKDL--ISKTIEILNQKQCIYEGVLAKPKGNEIEDWE-PRSQLLFKSTKFGDDVDRAL 312 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 KSDG++TYFA D+AY K ER FD I V+G+DH+GY+KRL+A A+S+ KA Sbjct: 313 KKSDGTWTYFANDVAYHAYKLERKFDKYINVLGADHAGYLKRLKACVDALSDFKADFECK 372 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 C+LV+L++ G P KMSKRAGDFIT + +V VG D+VRFMM++R N LDFDF V E Sbjct: 373 TCQLVKLFKSGEPYKMSKRAGDFITAKELVKAVGVDAVRFMMIYRSNDSQLDFDFDLVTE 432 Query: 445 QSKENPVFYVQYAYARCRSIFRQAK---DIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501 ++KENPVFYVQYA AR S+ R+ K +F L NV E++LI Sbjct: 433 KTKENPVFYVQYASARIHSVLRKTKFDNSVFEKSHLGLLTSNV----------EIELIKK 482 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 L+ +P+ IE A EP+++ +YLYDL+S H +W+ G+E+ + ++ + L R+ Sbjct: 483 LSLWPKTIELAARNLEPHRIPYYLYDLSSSLHSYWNLGKEDSSFKIIENPDINLVHARVF 542 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 L++ + S+I SGL+I+GV +P M Sbjct: 543 LLNKILSVIKSGLSILGVNAPETM 566 >gi|117924014|ref|YP_864631.1| arginyl-tRNA synthetase [Magnetococcus sp. MC-1] gi|238685476|sp|A0L5I2|SYR_MAGSM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|117607770|gb|ABK43225.1| arginyl-tRNA synthetase [Magnetococcus sp. MC-1] Length = 575 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 232/575 (40%), Positives = 345/575 (60%), Gaps = 45/575 (7%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS-VFIAGKG 87 L I +ERP+D +HG S N AM+L++ + P +A+ +V + V S IAG G Sbjct: 28 LGGIKVERPKDKSHGDFSINTAMVLAKQARMKPRDLAQRLVDALPSGQGVVSRCEIAGPG 87 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FIN +++P LR +++ ++ G YG+ +G G KV +EFVSANPTGPMHVGH R AV G Sbjct: 88 FINFFVTPERLRGVVADVLQRGGSYGQGNVGAGQKVLVEFVSANPTGPMHVGHGRGAVTG 147 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D LA ++ +GY V REYY+NDAG Q+ L SV RY+Q L+ + ++ EG YPG Y+ Sbjct: 148 DVLARILECAGYAVQREYYLNDAGVQVQVLGRSVMLRYRQ-LFGDAVEVAEGCYPGDYVV 206 Query: 208 HVGKELADKYSSELLNFPEEKWLPIVK-----------DYSVQAMMKIIRDDLKALNIQH 256 + + L +K ++KWL + + ++++Q ++ I+ DL LNI+ Sbjct: 207 DIARALKEK--------DQDKWLEVARAEPDEYPREMLEFAMQQVLTWIKADLARLNIRF 258 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D + SE H I ++ L+++G +YEG+L PPK K ++ R QLLF++T Sbjct: 259 DHWFSEFSLH--SEGRIEHALEVLSQKGCLYEGVLEPPKGKKSEAW-ASRPQLLFKATDF 315 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GD+VDR L KSDGSYTYFAAD+AY K ERGF+ ++ + G+DH GYV+R++A A++ Sbjct: 316 GDEVDRALRKSDGSYTYFAADVAYHLNKAERGFERLVNIWGADHGGYVRRVQAALGALTG 375 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K+ ++V+L ++V L R G P+KMSKRAG F+TL VV+ SD+VRF L R + LD Sbjct: 376 KQNLLDVVLIQMVNLTRGGEPVKMSKRAGTFVTLEEVVEATSSDAVRFWFLSRGSGAQLD 435 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD------FDLFPRNVIPQESE 490 FD ++ +NPV+YVQYA+AR SI+ +A+ L DL P + + +E Sbjct: 436 FDLDLAVAKNNDNPVYYVQYAHARICSIWDKAQHEGVALQAQGWSGVDLSP---LGEGAE 492 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550 +D LI L +P V+E A + QEP+++ +YL DLA+ FH ++ + R+ V A Sbjct: 493 WD-----LIRKLDLFPDVVEGAAVHQEPHRIPYYLLDLAAAFHTFYN----SHRIMDVDA 543 Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R RL L+ AV +I +GL ++GV+ P M Sbjct: 544 GTRD---ARLVLILAVKQVIANGLELLGVQQPRSM 575 >gi|91763297|ref|ZP_01265261.1| arginine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1002] gi|91717710|gb|EAS84361.1| arginine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1002] Length = 577 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 224/567 (39%), Positives = 354/567 (62%), Gaps = 29/567 (5%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIAGKG 87 L+ I ++ P +STN AM+LS+ P+ IA +++ IK D ++S+ +A G Sbjct: 30 LNGINVDIPPSNFDCDISTNVAMVLSKANKKSPIDIANILIELIKNEDEKIESISVAKPG 89 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FIN+ Y + SI + +YG N K K IEFVSANPTGP+HVGHCR A++G Sbjct: 90 FINIKFKTIYWNNFIKSINQNHKDYGVNNKEKKQKYLIEFVSANPTGPLHVGHCRGAILG 149 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN-----DSDLPEGYYP 202 D +++++ F+ ++V++EYY+ND G QI SVF+R ++ L+N +SDL YP Sbjct: 150 DVISNILIFNKHDVSKEYYVNDYGNQIINFTKSVFFRIREILFNEKFPIENSDL----YP 205 Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY---SVQAMMKIIRDDLKALNIQHDIF 259 G YL + K + S+++L F +K+ + K+ SV +K+I+++L L I HD F Sbjct: 206 GDYLVGIAKNIIK--SNKVLKF--DKFENVSKELTLLSVSESLKLIKNNLSNLGIVHDRF 261 Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319 SE D + ++ ID L + VY G + PK + + ++R+QLLF+ST GDD Sbjct: 262 TSETDIVLNNE--VQKAIDKLKEKKLVYSGKIKAPKGENDENW-VEREQLLFKSTDFGDD 318 Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 DR L KSD S+TYFA+D+AY K R +D +I ++G+DH+GY+KR+ +V A+S K Sbjct: 319 KDRALQKSDKSWTYFASDVAYHDNKLNRNYDTLINILGADHAGYIKRITSVVEALSGDKK 378 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439 ++ + +LV+L +DG P KMSKR GD+IT+ ++ EVG D+ RF+ML R + LDFDF Sbjct: 379 KLICKVSQLVKLIKDGKPFKMSKRKGDYITVEDLIAEVGKDATRFIMLNRSSDVELDFDF 438 Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQL 498 KVKE+SK+NP++YVQY YAR S+FR +I DL N+ E E+ E+++ Sbjct: 439 TKVKEKSKDNPLYYVQYCYARISSVFRHVNLNIENDL-------NIKDYEFEYTGDEIKI 491 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 + +AE+P+ IE A++ EP+++ YLY+L+S FH +W+ G+++ RF+ +K++ Sbjct: 492 LKKIAEWPKCIEAASLRLEPHRIPVYLYELSSEFHSYWNMGKDDQSKRFINE-QKKISND 550 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 +L + ++++I SG+NI+GV++P +M Sbjct: 551 KLVFLKVISNVIKSGMNIVGVDTPQKM 577 >gi|86157949|ref|YP_464734.1| arginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C] gi|109894970|sp|Q2II14|SYR_ANADE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|85774460|gb|ABC81297.1| arginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C] Length = 598 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 229/568 (40%), Positives = 346/568 (60%), Gaps = 29/568 (5%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK---IDPDVDSVFIAGKGFIN 90 +E PRD HG + NAAM+L++ G P +A+ IV ++ D+ + IAG GFIN Sbjct: 32 VEAPRDPKHGDFAVNAAMVLAKQAGKPPRELAQAIVEAVRAADTAGDLAGLEIAGPGFIN 91 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + LSP + L+ V G YGR +G+G KV +E+VSANPTGPMHVGH R AVVGD + Sbjct: 92 VRLSPDLWLRTLARAVAEGPAYGRTAVGQGKKVIVEYVSANPTGPMHVGHGRNAVVGDGV 151 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 L+ ++G++V+REYY+ND GAQ+ TLA SV RYQ+ L+ +P YPG Y+K + Sbjct: 152 QGLLRWAGFDVSREYYVNDYGAQVQTLARSVHLRYQE-LHGRAVTMPPKSYPGEYVKDIA 210 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 L +Y + L+ PE +WL + +D++VQ ++ +IR+DL A+NI D + SE + + Sbjct: 211 AGLKAEYGARFLDAPEAEWLTLFRDHAVQHVLGMIREDLAAVNISFDRWSSEKALY--ES 268 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQ---KCDMDRKQL-------LFRSTMVGDDV 320 + + L + VY G LPPPKSK Q + D + + LFRS+ GD+V Sbjct: 269 GTVDRFLRFLEEKDLVYVGKLPPPKSKKGQPPPQAQPDEEGVTAAEDLTLFRSSAYGDEV 328 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DRP+ K+DG+ TYF AD+AY K +R D ++ V+G+DH GYV RLEA A+ + Sbjct: 329 DRPVKKADGTPTYFCADIAYHWDKRQRA-DALVDVLGADHGGYVPRLEAAMEALGASRKD 387 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 ++V+L ++V L R G +KMSKRAG ++LR VVDEVG D+ RF+ L R++ LDFD Sbjct: 388 LHVVLIQMVSLMRGGESVKMSKRAGTLVSLREVVDEVGRDATRFIFLTRRSDAPLDFDVE 447 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQ 497 K+Q+ +NPVFYVQY +AR +IF++A++ P+ D D P+E + Sbjct: 448 LAKKQTLDNPVFYVQYGHARLAAIFQKAREAGHAVPEFDLDAARTLGSPEEQD------- 500 Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557 LI +A +P ++ A +A EP+++AFYL + + FH ++ G+++ + + + K T Sbjct: 501 LIRRIAAFPDLLAAAALAYEPHRVAFYLQETIAAFHSWYTQGKKSGE-KVIGPDPVK-TA 558 Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L A+ ++ +GL ++GV +P+ M Sbjct: 559 ARLFLCRALKQVLANGLAVLGVSAPDRM 586 >gi|71083662|ref|YP_266382.1| arginine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1062] gi|109895015|sp|Q4FM10|SYR_PELUB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|71062775|gb|AAZ21778.1| arginine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1062] Length = 577 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 221/556 (39%), Positives = 350/556 (62%), Gaps = 30/556 (5%) Query: 39 DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSY 97 DC +STN AM+LS+ P+ IA +++ IK D ++S+ A GFIN+ Y Sbjct: 43 DC---DISTNVAMVLSKANKKSPIDIANILIELIKNEDEKIESISAAKPGFINIKFKTIY 99 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + SI + +YG N K K IEFVSANPTGP+HVGHCR A++GD +++++ F+ Sbjct: 100 WNNFIKSINQNHKDYGVNNKEKKQKYLIEFVSANPTGPLHVGHCRGAILGDVISNILIFN 159 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNN-----DSDLPEGYYPGVYLKHVGKE 212 ++V++EYY+ND G QI SVF+R ++ L+N +SDL YPG YL + K Sbjct: 160 KHDVSKEYYVNDYGNQILNFTKSVFFRIREILFNEKFPIENSDL----YPGDYLVGIAKN 215 Query: 213 LADKYSSELLNFPEEKWLPIVKDY---SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 + S+++L F +K+ + K+ SV +K+I+++L L I HD F SE D + Sbjct: 216 IIK--SNKVLKF--DKFENVSKELTLLSVSESLKLIKNNLSNLGIVHDRFTSETDIVLNN 271 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 ++ ID L + VY G + PK + + ++R+QLLF+ST GDD DR L KSD Sbjct: 272 E--VQKAIDKLKEKKLVYSGKIKAPKGEDDENW-VEREQLLFKSTDFGDDKDRALQKSDK 328 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 S+TYFA+D+AY K R +D +I ++G+DH+GY+KR+ +V A+S K ++ + +LV Sbjct: 329 SWTYFASDVAYHDNKLNRNYDTLINILGADHAGYIKRITSVVEALSGDKKKLICKVSQLV 388 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 +L +DG P KMSKR GD+IT+ ++ EVG D+ RF+ML R + LDFDF KVKE+SK+N Sbjct: 389 KLIKDGKPFKMSKRKGDYITVEDLIAEVGKDATRFIMLNRSSDVELDFDFTKVKEKSKDN 448 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 P++YVQY YAR S+FR + +++ DL N+ E + E++++ +AE+P+ I Sbjct: 449 PLYYVQYCYARISSVFRH---VNLNIENDL---NIKDYEFAYTGDEIKILKKIAEWPKCI 502 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 E A++ EP+++ YLY+L+S FH +W+ G+E+ RF+ +K++ +L + ++++ Sbjct: 503 EAASLRLEPHRIPVYLYELSSEFHSYWNMGKEDQSKRFINE-QKKISNDKLVFLKVISNV 561 Query: 570 INSGLNIIGVESPNEM 585 I SG++I+GV++P +M Sbjct: 562 IKSGMDIVGVDTPQKM 577 >gi|254455816|ref|ZP_05069245.1| arginyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211] gi|207082818|gb|EDZ60244.1| arginyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211] Length = 576 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 213/554 (38%), Positives = 343/554 (61%), Gaps = 27/554 (4%) Query: 39 DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDSVFIAGKGFINLYLSPSY 97 DC +STN AM+LS+ P+ +AE I IK DP ++++ + GFIN+ P + Sbjct: 43 DC---DISTNVAMVLSKLNKKSPIDLAEQISPIIKNKDPLIENINVVKPGFINIKFKPFF 99 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + I+ + YG N K +EFVSANPTGP+HVGHCR A++GD +++++ F+ Sbjct: 100 WSNFIQQIITNSSTYGVNEKEKKLNYLVEFVSANPTGPLHVGHCRGAILGDVISNVLIFN 159 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217 ++VT+EYY+ND G QI SV++R ++ +N E YPG YL K + Sbjct: 160 KHKVTKEYYVNDYGNQIINFTRSVYFRIRELKFNETFPNNEDLYPGDYLIDFAKNIVSSN 219 Query: 218 SSELLNFPE-----EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 S +NF EK + S++ + +I+ +LK+L I HD F+SE + + Sbjct: 220 SD--INFDNYDDISEKLTTL----SIEQALLLIKKNLKSLGINHDNFVSEKNIVVNNE-- 271 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + ++I L +VY+G + P + Q ++R+QLLF+ST GDD DR L KSDGS+T Sbjct: 272 VEEVIKFLEASKFVYKGKIKAPAGEDDQNW-VEREQLLFKSTDFGDDKDRALQKSDGSWT 330 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 YFA+D+AY K K +R FD +I ++G+DH+GY+KR+ + A+S K ++ + +LV+L Sbjct: 331 YFASDVAYHKNKVDRNFDYLINILGADHAGYIKRISSSVEALSGTKGKLICKVSQLVKLI 390 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 +D P KMSKR GD+IT+ ++ EVG D+ RF+ML R + LDFDF VKE+SK+NP++ Sbjct: 391 KDKKPFKMSKRKGDYITVDDLITEVGKDATRFIMLNRSSDVELDFDFDAVKEKSKDNPLY 450 Query: 453 YVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511 YVQY YAR S+FR KD+ ++D D + E+ E++++ ++E+P+ IE Sbjct: 451 YVQYCYARISSVFRHLNKDLNSNIDIDDY-------SFEYSYDEIKILKKVSEWPKCIEA 503 Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571 A+ EP+++ YLY+LAS FH +W+ G++ P RF+ + ++++ +L + A++++I Sbjct: 504 ASNKLEPHRIPIYLYELASEFHSYWNLGKQQPEKRFIN-DQKEISPDKLVFLKAISNVIK 562 Query: 572 SGLNIIGVESPNEM 585 SG++I+GV++P++M Sbjct: 563 SGMSIVGVDTPDKM 576 >gi|218678655|ref|ZP_03526552.1| arginyl-tRNA synthetase [Rhizobium etli CIAT 894] Length = 297 Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust. Identities = 193/301 (64%), Positives = 236/301 (78%), Gaps = 6/301 (1%) Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM +IR+DL ALN+ HDIF SE H + IR I++L +GYVY+G LPPPK + + Sbjct: 1 MMVMIREDLAALNVHHDIFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQLPE 60 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+DH Sbjct: 61 DWE-DREQTLFRSTEVGDDMDRPLIKSDGSYTYFAADVAYFKNKFDRGFDEMIYVLGADH 119 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GYVKRLEAVA VSE KA++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG D Sbjct: 120 GGYVKRLEAVARGVSEGKAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVGRD 179 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL- 479 SVRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA++ FPDLD Sbjct: 180 SVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSVFRQAREAFPDLDVSTV 239 Query: 480 -FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + V D +ELQL+ LAE+PRV+E A +QEP++LAFYLYDLAS F HW+ Sbjct: 240 ELAKTVA---GIGDPAELQLVAKLAEFPRVVEAAAQSQEPHRLAFYLYDLASSFPAHWNK 296 Query: 539 G 539 G Sbjct: 297 G 297 >gi|309390229|gb|ADO78109.1| arginyl-tRNA synthetase [Halanaerobium praevalens DSM 2228] Length = 553 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 221/555 (39%), Positives = 322/555 (58%), Gaps = 38/555 (6%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 + IE PR+ HG +TN AM+L+ G++P IAE+IVA + + V+S IAG GFIN Sbjct: 37 EVSIEVPREKEHGDYATNLAMVLAGKAGMNPRKIAEIIVANFESEI-VESTNIAGPGFIN 95 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 L+ ++L L I G +YG+ GKG V +EFVSANPTGP+HVGH R AVVGD Sbjct: 96 FKLNNAWLWNNLKLITERGADYGKIDAGKGKSVQVEFVSANPTGPLHVGHSRGAVVGDVT 155 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 AS+M +GY+V REYYINDAG Q++ LA S RY++ L + ++PE Y G Y+K + Sbjct: 156 ASIMETAGYDVEREYYINDAGNQMDILAESTLLRYREIL-GEEIEMPEDVYAGDYIKEIA 214 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 +EL +Y ++L+ E K L I ++Y+ Q M+K I DL I+ D + SE H P Sbjct: 215 QELYAEYGADLIEKEESKKLEICREYAYQKMLKNIEADLGEFGIEFDNWFSERSLH---P 271 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I I+ L +GY++E + L F++T GDD DR ++KSDGS Sbjct: 272 DKIEAAIEILKEKGYIFE----------------EEDALWFKATDFGDDKDRVIIKSDGS 315 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TY AAD+AY K ERGFD +I V G+DH GY+ R+ AV A K ++ V++ ++V Sbjct: 316 PTYLAADMAYHLDKLERGFDKLINVWGADHHGYIPRVRAVIEAFGHKPDKLEVIVVQMVT 375 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L R+G + MSKRAG F+T+ V EVG D+ R+ + R LDFD KE+S NP Sbjct: 376 LLRNGKKMPMSKRAGSFVTMNEVNKEVGIDAARYYYVMRSTDSHLDFDLELAKEESTNNP 435 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+YVQYA+AR SI ++ + DL SE+ L+ LA++P I+ Sbjct: 436 VYYVQYAHARIHSIIDNSELEAKAENLDLLTHE----------SEIALMKMLAKFPEEIK 485 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 + +++P+ L Y YDLA+ FH +++ R V ++++L RL LV+A ++ Sbjct: 486 MSAESRQPHHLTTYAYDLATEFHSFYNNCR-------VNTDSKELAEARLYLVNAARQVL 538 Query: 571 NSGLNIIGVESPNEM 585 + L ++G+ +P +M Sbjct: 539 KNVLTVLGISAPEQM 553 >gi|322419462|ref|YP_004198685.1| arginyl-tRNA synthetase [Geobacter sp. M18] gi|320125849|gb|ADW13409.1| arginyl-tRNA synthetase [Geobacter sp. M18] Length = 554 Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust. Identities = 215/559 (38%), Positives = 325/559 (58%), Gaps = 31/559 (5%) Query: 28 ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGK 86 ++ I +E+P HG +TN AM +++ P +AE++V ++ + ++S+ IAG Sbjct: 26 VVPAINVEKPAHAEHGDFATNVAMQMAKQERKAPRAVAEILVQKLAGASELIESLEIAGP 85 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GFIN ++ S RK+LS I +G YG++ +G G KV +EFVSANPTGP+H+GH R A Sbjct: 86 GFINFFIKDSAWRKVLSEIDRAGDRYGKSSVGAGKKVQVEFVSANPTGPLHIGHGRGAAT 145 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206 GD +ASL+ +G++V REYYINDAG Q+NTL LS RYQ+ L D PE Y G Y+ Sbjct: 146 GDAVASLLCSAGFDVQREYYINDAGNQMNTLGLSGLLRYQE-LLGQKIDFPENCYQGDYI 204 Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 K + ++ ++ LN P+E+ ++K I +DL+ I+ D + SE Sbjct: 205 KDIARDAIARHGDRFLNAPQEEGGAFFAKMGGDLILKGIDEDLQDFGIRFDNWFSEQSLF 264 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 D + I + +G++YE +D L F++T GDD DR +++ Sbjct: 265 --DEGKVTSAIAEMQEKGHIYE---------------LD-GALWFKTTAFGDDKDRVVVR 306 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386 S+G TYFA+D+AY + K+ RGFD +I V G+DH GYV RL++V + K + ++L Sbjct: 307 SNGVTTYFASDIAYHRDKFARGFDWVIDVWGADHHGYVPRLKSVVQGLGRKPEDLGIILV 366 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446 +LV L RDG P+ MS R+G+F+TL+ VVDEVG D+ RF L R++ LDFD K QS Sbjct: 367 QLVSLLRDGQPVAMSTRSGEFVTLKEVVDEVGRDAARFFFLMRRSDSQLDFDLELAKRQS 426 Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 +NPV+YVQYA+AR +SIF A++ FD ++ ES D S LI L+ YP Sbjct: 427 SDNPVYYVQYAHARIKSIFDTARERGVAPAFDGVRLELL--ESADDMS---LIKKLSLYP 481 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 ++E A + EP+++ +YL +LA FH ++ + R + +LT RL L+H V Sbjct: 482 EILEGAAVNFEPHRITYYLQELAGEFHSFYN------KSRVITPEEPELTQARLFLLHCV 535 Query: 567 ASIINSGLNIIGVESPNEM 585 A + + L ++G+ +P M Sbjct: 536 AITLKNALTVLGISAPERM 554 >gi|89101282|ref|ZP_01174100.1| arginyl-tRNA synthetase [Bacillus sp. NRRL B-14911] gi|89084002|gb|EAR63185.1| arginyl-tRNA synthetase [Bacillus sp. NRRL B-14911] Length = 556 Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust. Identities = 223/592 (37%), Positives = 339/592 (57%), Gaps = 43/592 (7%) Query: 1 MYLFADFSSRLKNYLKE--IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58 M + S LK +K+ I + E++I D +++E P++ AHG STN AM L+R Sbjct: 1 MNIVEQVQSNLKEEIKQAVIKAGLAAEEQIPD-VILETPKEKAHGDYSTNMAMQLARIAK 59 Query: 59 LDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117 P IAE ++ ++ + IAG GFIN Y++ SYL ++ +++ +G +YG Sbjct: 60 KAPRMIAEQLIENFDSSKASIEKIEIAGPGFINFYMNNSYLTNLIPTVLDAGAQYGETNT 119 Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 G G KV IEFVSANPTG +H+GH R A VGD+L+S++A +GY+V+REYYINDAG QIN L Sbjct: 120 GNGQKVQIEFVSANPTGDLHLGHARGAAVGDSLSSILAKAGYDVSREYYINDAGNQINNL 179 Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237 ALSV RY QAL + ++P Y G + +G+ LAD++ + +N E++ ++Y Sbjct: 180 ALSVEARYFQAL-GMEKEMPADGYHGADIIGIGQRLADEFGDKYVNADEKERFDAFREYG 238 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 ++ M+ ++ DL+ + D++ SE ++ I D + L G+VYE Sbjct: 239 LKYEMEKLKKDLEDFRVPFDVWYSETSLYQN--GKIDDALKALKENGHVYE--------- 287 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 + FRST GDD DR L+K+DGSYTY D+AY K K ERGF+ +I V G Sbjct: 288 -------EEGATWFRSTEFGDDKDRVLIKNDGSYTYLTPDIAYHKDKLERGFEKLINVWG 340 Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 +DH GY+ R++A A+ K + V + +LV LY++G +KMSKR G +T+R +VDEV Sbjct: 341 ADHHGYIPRMKAAIQALGYGKDALEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLVDEV 400 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD----IFP 473 G D+VR+ R +DFD QS +NPV+Y QYA+AR SI RQ ++ + Sbjct: 401 GLDAVRYFFAMRSADTHMDFDLDLAVSQSNDNPVYYAQYAHARISSILRQGEEQGMALSA 460 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 D DF L I E E D L+ L E+P+ + A + P+++ Y+++LAS FH Sbjct: 461 DADFSL-----ISAEKEID-----LLKKLGEFPQAVAEAAEKRMPHRITNYIFELASAFH 510 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + + ++N + T RL L+ AV + + + L +IGV +P +M Sbjct: 511 SFYN------AEKVLDSDNPEKTKARLGLIKAVQTALRNALKLIGVSAPEKM 556 >gi|95930475|ref|ZP_01313211.1| arginyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684] gi|95133515|gb|EAT15178.1| arginyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684] Length = 554 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 223/568 (39%), Positives = 327/568 (57%), Gaps = 32/568 (5%) Query: 19 DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV 78 D + + +I D IE P HG + NAAM+++R P IAE++VA++K + Sbjct: 18 DAETLISNEIPD-FAIEVPNRSDHGDFAVNAAMLMARTEKKAPRQIAEILVAQLKEQQGL 76 Query: 79 -DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMH 137 D V IAG GFIN +LS S + L I G +G+ +G G +V +EFVSANPTGP+H Sbjct: 77 WDRVEIAGPGFINFFLSASCWHEALKQIYAQGAGFGKCDVGAGKRVQVEFVSANPTGPLH 136 Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP 197 +GH R A GD +AS++ +G+EV REYYINDAG Q++TL S++ RY Q L + D P Sbjct: 137 IGHGRGAATGDAVASVLQEAGFEVQREYYINDAGNQMDTLGRSIYLRYCQ-LQGQEVDFP 195 Query: 198 EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257 E Y G Y++ +++ D L+ E + +A+ + I DL+ I+ D Sbjct: 196 EDCYQGDYIRDYAQQVLDGEGRRFLDMEEADAIAWFSREGGEAIRQGIDADLQQFGIRFD 255 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 + SE + D ++ ID L R GY YE + FR+T G Sbjct: 256 NWYSEQTLY--DRDLVKQGIDALTRDGYTYE----------------QDGAIWFRTTDFG 297 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 DD DR L++S+G+ TYFA+D+AY + KY+RGFD +I V G+DH GYV R++AV AA+ Sbjct: 298 DDKDRVLIRSNGATTYFASDVAYHREKYQRGFDIVIDVWGADHHGYVPRMKAVLAALGRN 357 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437 + ++L +LV L R+G I MS RAG F+TL+ VVDEVG D+ RF L R++ LDF Sbjct: 358 PEDLQIILVQLVNLLREGEQIAMSTRAGKFVTLKEVVDEVGRDACRFFFLMRRSDSQLDF 417 Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497 D K+QS ENPV+YVQYA+AR SI R A++ L + + E+ ELQ Sbjct: 418 DLELAKKQSTENPVYYVQYAHARVCSINRNAEES----GVALLGGDEVKLEALTLPEELQ 473 Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557 L ++ YP V+ +A + EP+K+ FYL +LA+ FH +++ R V ++ ++ Sbjct: 474 LTKMMSRYPEVVASAALNYEPHKITFYLQELAAQFHSYYNQHR-------VIVDDVDVSQ 526 Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585 RL LV+AV +++S L ++GV +P +M Sbjct: 527 ARLYLVNAVKQVVSSALTVLGVSAPEKM 554 >gi|197118664|ref|YP_002139091.1| arginyl-tRNA synthetase [Geobacter bemidjiensis Bem] gi|238690877|sp|B5EEF0|SYR_GEOBB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|197088024|gb|ACH39295.1| arginyl-tRNA synthetase [Geobacter bemidjiensis Bem] Length = 554 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 209/555 (37%), Positives = 321/555 (57%), Gaps = 31/555 (5%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90 I +E+P HG +TN AM +++ P +AE++VA++ D ++S+ IAG GFIN Sbjct: 30 INVEKPAHAEHGDFATNVAMQMAKQQRKAPRAVAEILVAKLAGASDLIESLEIAGPGFIN 89 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 ++ S R+ L+ I +G +G++ IG+G KV +EFVSANPTGP+H+GH R A GD + Sbjct: 90 FFIKDSAWRRTLTEIDRAGDAWGKSGIGRGKKVQVEFVSANPTGPLHIGHGRGAATGDAV 149 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ASL++ +G++V REYYINDAG Q+NTL LS RY++ L D PE Y G Y+K + Sbjct: 150 ASLLSAAGFDVQREYYINDAGNQMNTLGLSGLLRYKE-LLGEKIDFPETCYQGDYMKDIA 208 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 ++ KY L +E + ++ I DL+ I+ D + SE D Sbjct: 209 RDAVTKYGDRFLKVSQEDGVAFFSKMGGDLILAGIDQDLQDFGIRFDHWFSEQSLF--DE 266 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 ++ I+ + +G +YE L FR+T GDD DR +++S+G Sbjct: 267 GKVKSAIEEMQAKGLIYE----------------QEGALWFRTTDYGDDKDRVVVRSNGV 310 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFA+D+AY + K+ RGFD +I V G+DH GYV RL++V + + + ++L +LV Sbjct: 311 TTYFASDIAYHRDKFARGFDWVIDVWGADHHGYVPRLKSVVQGLGRDASDLGIILVQLVS 370 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L RDG+P+ MS R+G+F+TL+ VVDEVG D+ RF L R++ LDFD K QS +NP Sbjct: 371 LLRDGVPVAMSTRSGEFVTLKEVVDEVGRDAARFFFLMRRSDSQLDFDLELAKRQSNDNP 430 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+YVQYA+AR +SIF A++ + FD ++ Q E +L L+ L+ YP ++E Sbjct: 431 VYYVQYAHARIKSIFDTARERGVEPRFDSVKLELL-QTPE----DLSLVKKLSVYPEILE 485 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 + EP+++ +YL +LA FH ++ + R + +LT RL L+H VA + Sbjct: 486 GGAVNFEPHRITYYLQELAGEFHSFYN------KSRVITPEEPELTQARLFLLHCVAITL 539 Query: 571 NSGLNIIGVESPNEM 585 + L ++G+ +P M Sbjct: 540 KNALTVLGISAPERM 554 >gi|253700562|ref|YP_003021751.1| arginyl-tRNA synthetase [Geobacter sp. M21] gi|259511647|sp|C6E805|SYR_GEOSM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|251775412|gb|ACT17993.1| arginyl-tRNA synthetase [Geobacter sp. M21] Length = 554 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 208/560 (37%), Positives = 321/560 (57%), Gaps = 41/560 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90 I +E+P HG +TN AM +++ P +AE++VA++ D ++S+ IAG GFIN Sbjct: 30 INVEKPAHAEHGDFATNVAMQMAKQQRKAPRAVAEILVAKLAGASDLIESLEIAGPGFIN 89 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 ++ R+ LS I +G +G++ IG+G KV +EFVSANPTGP+H+GH R A GD + Sbjct: 90 FFIKDGAWRRTLSEIDRAGDAWGKSGIGRGKKVQVEFVSANPTGPLHIGHGRGAATGDAV 149 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ASL++ +G++V REYYINDAG Q+NTL LS RY++ L + PE Y G Y+K + Sbjct: 150 ASLLSAAGFDVQREYYINDAGNQMNTLGLSGLLRYKE-LLGEKIEFPETCYQGDYMKDIA 208 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 ++ KY L +E+ + ++ I DL+ ++ D + SE D Sbjct: 209 RDAVTKYGDRFLKVSQEEGVAFFSKMGGDLILAGIDQDLQDFGVRFDHWFSEQSLF--DE 266 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + I+ + +G +YE L FR+T GDD DR +++S+G Sbjct: 267 GKVNSAIEEMQAKGLIYE----------------QEGALWFRTTDYGDDKDRVVVRSNGV 310 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFA+D+AY + K+ RGFD +I V G+DH GYV RL++V + + + ++L +LV Sbjct: 311 TTYFASDIAYHRDKFARGFDWVIDVWGADHHGYVPRLKSVVQGLGRDASDLGIILVQLVS 370 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L RDG+P+ MS R+G+F+TL+ VVDEVG D+ RF L R++ LDFD K QS +NP Sbjct: 371 LLRDGVPVAMSTRSGEFVTLKEVVDEVGRDAARFFFLMRRSDSQLDFDLELAKRQSNDNP 430 Query: 451 VFYVQYAYARCRSIFRQAKD-----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 V+YVQYA+AR +SIF A++ +F + F+L P+ +L LI L+ Y Sbjct: 431 VYYVQYAHARIKSIFDTARERGVEPLFDSVKFELLQ---TPE-------DLSLIKKLSVY 480 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 P ++E + EP+++ +YL +LA FH ++ + R + +LT RL L+H Sbjct: 481 PEILEGGAVNFEPHRITYYLQELAGEFHSFYN------KSRVITPEEPELTQARLFLLHC 534 Query: 566 VASIINSGLNIIGVESPNEM 585 VA + + L ++G+ +P M Sbjct: 535 VAITLKNALTVLGISAPERM 554 >gi|332971382|gb|EGK10340.1| arginine--tRNA ligase [Desmospora sp. 8437] Length = 564 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 217/549 (39%), Positives = 317/549 (57%), Gaps = 32/549 (5%) Query: 38 RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPS 96 R+ +HG L+TN AM L+R +P IAE IV + D V + IAG GFIN ++ S Sbjct: 47 REKSHGDLATNMAMQLARIAKKNPRQIAEAIVDGMNRDRVAVREIHIAGPGFINFFIDRS 106 Query: 97 YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 +LR++L I +G YGR+ G G KV +EFVS NPTG +H+GH R A +GD L +++ Sbjct: 107 HLREVLVEIGRAGDAYGRSSAGNGEKVLVEFVSVNPTGSLHLGHARGAAIGDVLCNVLEA 166 Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216 +GY+VTREYYINDAG QI + LS+ RY++AL D PE Y G + +GK LA++ Sbjct: 167 AGYDVTREYYINDAGNQIRNMTLSLEARYREAL-GRKVDFPEDGYRGQDIVDLGKRLAEE 225 Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276 LL+ EE+ ++ Y + +++ I+ DLK +Q D + SE H D +++ Sbjct: 226 EGDRLLSLDEEERFAWIRRYGLNRLLEGIKKDLKEYRVQFDSWFSEQSLH--DSGSVQES 283 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336 ++ L R+G YE L +S+ GDD DR L+K DGSYTY Sbjct: 284 VEELTRRGQTYE----------------QDGALWLKSSQFGDDKDRVLVKQDGSYTYITP 327 Query: 337 DLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396 D+AY + KY RGFD ++ + G+DH GYV R++A AA+ ++ L+ ++V+LY+ G Sbjct: 328 DIAYHRNKYNRGFDRIVDIFGADHHGYVPRMKAAMAALGFDVDKMTFLITQMVKLYQGGE 387 Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456 +KMSKR G ITL +++EVG D+ R+ R LDFD QS ENPVFYVQY Sbjct: 388 LVKMSKRTGKAITLAELMEEVGVDATRYFFASRGPDSHLDFDMDLAVSQSNENPVFYVQY 447 Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 A+AR S+FR+A + ++ D + + +E+EFD L+ LAE+P I A Sbjct: 448 AHARINSVFRRAGEQGMEVKLDPDSLSALQEEAEFD-----LLQKLAEFPEEIATAAKQM 502 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 P+++ YLYDLA+ +++ R +Q + R LT RL L+ VA ++ SGL + Sbjct: 503 APHRMVRYLYDLATQLQSYYNA------YRVIQEDER-LTRARLSLLLGVAQVLKSGLRM 555 Query: 577 IGVESPNEM 585 IGV +P +M Sbjct: 556 IGVSAPEQM 564 >gi|294501901|ref|YP_003565601.1| arginyl-tRNA synthetase [Bacillus megaterium QM B1551] gi|294351838|gb|ADE72167.1| arginyl-tRNA synthetase [Bacillus megaterium QM B1551] Length = 556 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 217/589 (36%), Positives = 340/589 (57%), Gaps = 37/589 (6%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + +LK +++ K + EK L +++E P+D HG STN AM L+R Sbjct: 1 MNIVEQVQQKLKAEIQDAVVKAGLAEKAELPEVLLETPKDKTHGDYSTNMAMQLARIAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y++ SYL +++ +IV +G YG+ +G Sbjct: 61 APRVIAEELVANFDKSQASIEKIDIAGPGFINFYMNNSYLAELIPTIVKAGEAYGQTNVG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G KV +EFVSANPTG +H+GH R A VGD+L +++ +GY+V+REYYINDAG QIN LA Sbjct: 121 NGQKVQVEFVSANPTGDLHLGHARGAAVGDSLCNVLEKAGYDVSREYYINDAGNQINNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 SV RY QAL + ++P Y G + ++GKELA ++ + N EE+ + Y + Sbjct: 181 YSVEARYMQAL-GLEKEMPADGYHGADIINIGKELAKEHGDKYANASEEERFEFFRQYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + ++ DL+ ++ D++ SE ++ D I ++ L +QG+VYE Sbjct: 240 DYELAKLKRDLEQFRVKFDVWYSETSLYKNDKISI--ALETLKKQGHVYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRST GDD DR L+K+DGS+TY D+AY + K +RGFD +I + G+ Sbjct: 288 ------EEGATWFRSTTFGDDKDRVLIKNDGSFTYLTPDIAYHQDKIQRGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ +K + V + ++V+LY++G +KMSKR G +T+R +V+EVG Sbjct: 342 DHHGYIPRMKAAIQALGYEKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTMRDLVEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD--IFPDLD 476 D+ R+ R LDFD QS ENPV+Y QYA+AR SI RQ ++ I Sbjct: 402 LDATRYFFAMRSADTHLDFDLDLAVSQSNENPVYYAQYAHARICSILRQGEEMGIQSTSG 461 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 DL ++I E E++L+ + E+P+ + A + P+++ Y++DLAS FH + Sbjct: 462 ADL---SLISAE-----KEMELLKKIGEFPQAVAEAATKRIPHRITNYVFDLASTFHSFY 513 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + ++N + + R++LV AV + + L +IGV +P +M Sbjct: 514 N------AEKVLDSDNVETSKARIELVKAVQVTLQNSLKLIGVSAPEKM 556 >gi|295707249|ref|YP_003600324.1| arginyl-tRNA synthetase [Bacillus megaterium DSM 319] gi|294804908|gb|ADF41974.1| arginyl-tRNA synthetase [Bacillus megaterium DSM 319] Length = 556 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 216/589 (36%), Positives = 340/589 (57%), Gaps = 37/589 (6%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + +LK +++ K + EK L +++E P+D HG STN AM L+R Sbjct: 1 MNIVEQVQQKLKAEIQDAVVKAGLAEKAELPEVLLETPKDKTHGDYSTNMAMQLARIAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y++ SYL +++ +IV +G YG+ +G Sbjct: 61 APRVIAEELVANFDKSKASIEKIDIAGPGFINFYMNNSYLTELIPTIVKAGEAYGQTNVG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G KV +EFVSANPTG +H+GH R A VGD+L +++ +GY+V+REYYINDAG QIN LA Sbjct: 121 NGQKVQVEFVSANPTGDLHLGHARGAAVGDSLCNVLEKAGYDVSREYYINDAGNQINNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 SV RY QAL + ++P Y G + ++GKELA ++ + +N EE+ + Y + Sbjct: 181 YSVEARYMQAL-GLEKEMPADGYHGADIINIGKELAKEHGDKYVNASEEERFEFFRQYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + ++ DL+ ++ D++ SE ++ D + ++ L +QG+VYE Sbjct: 240 DYELAKLKRDLEQFRVKFDVWYSETSLYKNDKISV--ALETLKKQGHVYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRST GDD DR L+K+DGS+TY D+AY + K +RGFD +I + G+ Sbjct: 288 ------EEGATWFRSTTFGDDKDRVLIKNDGSFTYLTPDIAYHQDKIQRGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ +K + V + ++V+LY++G +KMSKR G +T+R +V+EVG Sbjct: 342 DHHGYIPRMKAAIQALGYEKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTMRDLVEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD--IFPDLD 476 D+ R+ R LDFD QS ENPV+Y QYA+AR SI RQ ++ I Sbjct: 402 LDATRYFFAMRSADTHLDFDLDLAVSQSNENPVYYAQYAHARICSILRQGEEMGIQSTSG 461 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 DL ++I E E +L+ + E+P+ + A + P+++ Y++DLAS FH + Sbjct: 462 ADL---SLISAE-----KETELLKKIGEFPQAVAEAATKRIPHRITNYVFDLASTFHSFY 513 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + ++N + + R++LV AV + + L +IGV +P +M Sbjct: 514 N------AEKVLDSDNVETSKARIELVKAVQVTLQNSLKLIGVSAPEKM 556 >gi|312142763|ref|YP_003994209.1| arginyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus'] gi|311903414|gb|ADQ13855.1| arginyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus'] Length = 553 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 223/582 (38%), Positives = 338/582 (58%), Gaps = 40/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 A S L LK+ + ++E + + I +E+PR+ HG +TN AM + G++P I Sbjct: 11 AKLISALAESLKKAIYEGELELEGVPEISVEQPREKEHGDYATNLAMAAASQAGMNPRKI 70 Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 AE+IV + + V+ + IAG GFIN L ++L + L I +YG+ G+G +V Sbjct: 71 AEIIVDNFEGEG-VEEISIAGPGFINFKLKKNWLYENLKLINKLKDDYGKIDTGQGKRVQ 129 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 IEFVSANPTGP+HVGH R AVVGD AS+M +GY+V REYYINDAG Q++ LA S R Sbjct: 130 IEFVSANPTGPLHVGHSRGAVVGDVCASIMEAAGYDVEREYYINDAGNQMDILAESTLLR 189 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 Y++ + + LPE Y G Y+ + ++L +Y ++L E+K L I ++++ Q M++ Sbjct: 190 YRE-ICGKEIKLPEDVYAGDYVIEIAEDLYQEYGRDILEEEEQKQLDICREFAYQDMLQK 248 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 I++DL I+ D + SE H P+ I + +D L +GY+YE Sbjct: 249 IKEDLNKFGIEFDNWFSERTLH---PAKINEAVDVLRDKGYIYE---------------- 289 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 + L F+S+ GDD DR ++KSDGS TY AAD+AY K ERGFD +I V G+DH GY+ Sbjct: 290 EEAALWFKSSEFGDDKDRVVIKSDGSPTYLAADIAYHLDKLERGFDKLINVWGADHHGYI 349 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 R++AV A + + +++ ++V L R+G ++MSKRAG F+T+ V +EVG+D+ R+ Sbjct: 350 PRMKAVIEAFGYGRDTLEIIVVQMVNLLRNGEKMQMSKRAGSFVTMNEVNEEVGTDAARY 409 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRN 483 + R LDFD KE+S NPV+YVQYA+AR SI A +I PD + L Sbjct: 410 YYIMRSTDSHLDFDLELAKEESSNNPVYYVQYAHARIHSIIDNA-EIEPDSENLKLLS-- 466 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 D +E+ L+ LA +P I+ + +++P+ L Y YDLA+ FH +++ R Sbjct: 467 --------DPAEVDLMKMLASFPEEIKLSAESRQPHHLTAYAYDLATAFHAFYNNCR--- 515 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V +N +L+ RL LV A ++ + L ++G+ +P EM Sbjct: 516 ----VNTDNNELSGARLYLVDAARQVLKNVLTLLGISAPAEM 553 >gi|332703861|ref|ZP_08423949.1| Arginyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay] gi|332554010|gb|EGJ51054.1| Arginyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay] Length = 553 Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust. Identities = 217/561 (38%), Positives = 338/561 (60%), Gaps = 40/561 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFIN 90 + +E P+D G L+TNAAMIL++ G P +A + R+ P+++ + +AG GF+N Sbjct: 26 VSLEPPKDIKFGDLATNAAMILAKQAGKPPREVAAELRERLLGSHPEIERIEVAGPGFLN 85 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +PS+ + IL ++ G +G +G+ KV +E+VSANPTGP+H+GH R A +GD+L Sbjct: 86 FSFAPSFWQSILQDVLEQGDRFGALDVGQKKKVLVEYVSANPTGPLHLGHGRGAALGDSL 145 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ F+G++VT E+YINDAG Q+ L +S++ RYQQA +N D +LPE Y G Y+K + Sbjct: 146 VRVLRFAGFDVTTEFYINDAGRQMRLLGMSIWVRYQQA-FNRDVELPEDSYRGEYIKDIA 204 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 E+A + SELL PE + + + +++ + +++K I+ DL + HDI+ SE D Sbjct: 205 AEIAASHGSELLQVPEAQAMDVCREHGMLSILKWIKRDLNEFRVSHDIWFSERRLV--DT 262 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + I L +G YE L F ST GDD DR L +S G Sbjct: 263 GQVESTIKWLQDKGLAYE----------------QEGALWFNSTRFGDDKDRVLRRSSGE 306 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFA+D+AY KY RG+D ++ + G+DH GYV R++A A A+ + Q+ V+L ++V Sbjct: 307 LTYFASDIAYHADKYSRGYDLLVDIWGADHHGYVPRMKAAAQALGKDADQLQVVLVQMVN 366 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 + R G I MSKRAG F TL VV EVG DS RFM + RK+ LDFD VK+QS +NP Sbjct: 367 ILRGGEQISMSKRAGTFETLADVVKEVGVDSARFMFMTRKSDSHLDFDLELVKQQSMDNP 426 Query: 451 VFYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSE-LQLIVHLAEY 505 V+YVQYA+AR RS+FR+A++ + P +D R+ + + DT E +QL+ + + Sbjct: 427 VYYVQYAHARIRSVFRKAREQGLALQPTVD-----RSKLM--ALLDTPEDIQLLKLMEHF 479 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWS-HGRENPRLRFVQANNRKLTMMRLQLVH 564 P ++ A + P+ ++F+L +LA++ H ++S H + + A + +LT+ RL L+ Sbjct: 480 PDAVDAAAKSLSPHHISFFLRELAALLHRYYSVH-------KVLGAESSQLTLARLLLLD 532 Query: 565 AVASIINSGLNIIGVESPNEM 585 AVA ++ +GL ++GV +P +M Sbjct: 533 AVAQVLRNGLQLLGVNAPEQM 553 >gi|329769586|ref|ZP_08260991.1| arginyl-tRNA synthetase [Gemella sanguinis M325] gi|328838538|gb|EGF88145.1| arginyl-tRNA synthetase [Gemella sanguinis M325] Length = 544 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 216/556 (38%), Positives = 329/556 (59%), Gaps = 36/556 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E P++ +G S+N AM L+R L +P IAE I++ I D ++ + IAG GFIN Sbjct: 23 IYVETPKNNDNGDFSSNIAMQLTRVLKKNPRVIAEEIISNIPEDETIEKIEIAGPGFINF 82 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 Y+ S L ++ ++ +YG N +G+G KV +E+VSANPTG +HVGH R A D+LA Sbjct: 83 YVKKSSLGSVIEKVLTDNEKYGENNVGQGKKVLLEYVSANPTGTLHVGHARNAAYSDSLA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +M SGY+++REYYINDAG QIN L +S RY+QAL +++LPE Y G +K +G+ Sbjct: 143 RIMKKSGYDLSREYYINDAGNQINNLVISAIVRYKQAL-GLEAELPEDAYHGEDIKVLGQ 201 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 +L D++ LL E ++DY+V M+ I+ DL +++D++ SE + + Sbjct: 202 KLKDEFGDSLL--EREDLESFIRDYAVAYEMENIKKDLGDFGLEYDVYFSEKSLY--ENG 257 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG--DDVDRPLLKSDG 329 + +++L QGYVYE L ++T +G DD DR L+K+DG Sbjct: 258 LVDKALESLREQGYVYE----------------KDGALWLKTTALGTGDDKDRVLIKADG 301 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 S TY +D+AY K K +RGFD ++ V+G+DH GYV RL+A A+ K Q+ L+ ++V Sbjct: 302 SLTYLTSDIAYHKNKLDRGFDLLLDVLGADHHGYVARLKASIVAMGYKAEQLEALIMQMV 361 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 +L +G +KMSKR G ITLR ++DEVG+D+ R+ ++ R LDFDF KEQS +N Sbjct: 362 QLLNNGEVVKMSKRTGKAITLRDLIDEVGADAARYFLVMRSADSHLDFDFAVAKEQSSDN 421 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 P++YVQYA+AR SI RQA + DF++ N E D ++L+ +LA +P ++ Sbjct: 422 PLYYVQYAHARICSILRQASE---QGDFNIENCNY---ELLTDEYSVELLKNLAYFPEIV 475 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 A EP+++ YL +LAS FH +++ + V N++ T L L+ AV Sbjct: 476 AQAATNYEPHRICNYLQNLASSFHKFYNNNK-------VITENKEQTESYLALITAVKIT 528 Query: 570 INSGLNIIGVESPNEM 585 + + L +IGV +P +M Sbjct: 529 LRNALELIGVSAPEKM 544 >gi|116748008|ref|YP_844695.1| arginyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB] gi|116697072|gb|ABK16260.1| arginyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB] Length = 559 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 213/557 (38%), Positives = 325/557 (58%), Gaps = 32/557 (5%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD--VDSVFIAGKGFI 89 I ++ P+ HG +TN A+ L+R L +P IA IV + DPD + V IAG GFI Sbjct: 32 IELDIPKLPEHGDYATNVALALTRRLKRNPREIAGKIVGGLN-DPDNLLQKVEIAGPGFI 90 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N + P IL+ I+ YGR +G+G +V +EFVSANPTGP+H+GH R A GD Sbjct: 91 NFFFHPRAWHGILTDILADPRNYGRLDLGEGHRVQVEFVSANPTGPLHIGHGRGAATGDA 150 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 LA+++ GY V REYYINDAG Q++TL S+++RYQ+AL + P+ +Y G Y+K + Sbjct: 151 LANILEACGYAVEREYYINDAGNQMDTLGRSLYFRYQEAL-GEPVEFPDAHYRGEYMKDL 209 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 ++ L P ++ LP+ ++ +++ I+DDL + D + SE H D Sbjct: 210 ARDFLRDNGDRYLRAPLDEVLPLFTRFAADRILEGIKDDLGEFGVSFDQWFSERSLHAED 269 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 IR +++L R+G++YE + F+ST GD+ DR +++++G Sbjct: 270 A--IRRTVEDLNRRGFIYES----------------EGAVWFKSTAFGDEKDRVVIRANG 311 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 TYFAADLAY + KY+RG+D ++ + G+DH GYV+R+ A A+ + + ++L +LV Sbjct: 312 VSTYFAADLAYHRNKYDRGYDKVVDIWGADHHGYVERMLAGVEALGRNREDLRIVLVQLV 371 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 L R G P+ MS RAG+F+TLR VVDEVG D+ RF+ L R++ LDFD K ++ +N Sbjct: 372 NLLRAGKPVAMSTRAGEFVTLREVVDEVGKDAARFIFLTRRSDSPLDFDLDVAKARTNDN 431 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRV 508 PVFYVQYA+AR SIF+ A + L D IP ELQ+I L EYP + Sbjct: 432 PVFYVQYAHARLCSIFQVAAE--RGLVCDWANGKDIPDLGLLTLAQELQIIKFLGEYPAI 489 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 + N + + EP+ + +YL++L S+FH +++ R V ++ +LT RL + A+ Sbjct: 490 LANCSRSMEPHFIPYYLHELVSLFHSYYNQNR-------VIGDDPELTRARLFMAAAIRE 542 Query: 569 IINSGLNIIGVESPNEM 585 +I + L ++GV +P +M Sbjct: 543 VIRNALELLGVSAPEKM 559 >gi|329768518|ref|ZP_08260006.1| arginyl-tRNA synthetase [Gemella haemolysans M341] gi|328836668|gb|EGF86325.1| arginyl-tRNA synthetase [Gemella haemolysans M341] Length = 544 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 217/560 (38%), Positives = 327/560 (58%), Gaps = 44/560 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E P++ +G S+N AM L+R L +P IAE I++ I D V+ + IAG GFIN Sbjct: 23 IHVETPKNTENGDFSSNVAMQLTRVLRKNPRVIAEEIISNIDEDEAVEKIEIAGPGFINF 82 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 ++ S L ++ I+ +YG N IG+G KV +E+VSANPTG +HVGH R A D+LA Sbjct: 83 FVKKSSLGSVVGKILEDDFKYGENNIGQGKKVLLEYVSANPTGTLHVGHARNAAYSDSLA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +M SGY+++REYYINDAG QIN L +S RY+QAL D++LP+ Y G +K +G+ Sbjct: 143 RIMKKSGYDLSREYYINDAGNQINNLVISAIVRYKQAL-GMDAELPDDAYHGEDIKVLGQ 201 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 +L D++ LL E +++Y+V M+ I+ DL +++D+F SE + + Sbjct: 202 KLKDEFGDSLL--EREDLNEFIREYAVAYEMENIKKDLGDFGLEYDVFFSEKSLY--ENG 257 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG--DDVDRPLLKSDG 329 + +++L QG+VYE L +T +G DD DR L+K+DG Sbjct: 258 LVDKALESLREQGFVYE----------------KDGALWLETTALGTGDDKDRVLIKADG 301 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 S TY +D+AY K K +RGFD +I V+G+DH GY+ RL+A A+ K Q+ VL+ ++V Sbjct: 302 SLTYLTSDIAYHKNKLDRGFDLLIDVLGADHHGYIARLKASIVAMGYKAEQLEVLIMQMV 361 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 +L +G +KMSKR G ITLR ++DEVG+D+ R+ ++ R LDFDF KEQS +N Sbjct: 362 QLLNNGEVVKMSKRTGKAITLRDLIDEVGADAARYFLVMRSADSHLDFDFAVAKEQSSDN 421 Query: 450 PVFYVQYAYARCRSIFRQAKDIFP----DLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 P++YVQYA+AR SI RQA + + D++L D + L+ +LA Y Sbjct: 422 PLYYVQYAHARICSILRQAAEQVEYDVKNCDYELLT----------DEYSVDLLKNLAYY 471 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 P ++ A EP+++ YL LAS FH +++ + V N++ T L L+ A Sbjct: 472 PEIVAQAAKNYEPHRICNYLQSLASSFHKFYNNNK-------VITENKEQTQSYLALITA 524 Query: 566 VASIINSGLNIIGVESPNEM 585 V + + L++IGV +P +M Sbjct: 525 VKITLRNALDLIGVSAPEKM 544 >gi|317496051|ref|ZP_07954411.1| arginyl-tRNA synthetase [Gemella moribillum M424] gi|316913626|gb|EFV35112.1| arginyl-tRNA synthetase [Gemella moribillum M424] Length = 544 Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust. Identities = 219/560 (39%), Positives = 322/560 (57%), Gaps = 44/560 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E P++ +G S+N AM L+R L +P IAE I+A I D V+ V IAG GFIN Sbjct: 23 IYVETPKNTDNGDFSSNVAMQLTRVLRKNPRVIAEEIIANIPADDAVEKVEIAGPGFINF 82 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 Y+ S L I+ I+ +YG N G+G KV +E+VSANPTG +HVGH R A D+LA Sbjct: 83 YVKKSSLGSIIEKILADDCKYGENNTGQGKKVLLEYVSANPTGTLHVGHARNAAYSDSLA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +M SGY+++REYYINDAG QIN L +S RY+QAL ++++PE Y G +K +G+ Sbjct: 143 RIMKKSGYDISREYYINDAGNQINNLVISAIVRYKQAL-GLEAEMPEDAYHGEDIKVLGQ 201 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 +L D++S LL E ++DY+V M I+ DL +++D++ SE + + Sbjct: 202 KLKDEFSDSLL--EREDLESFIRDYAVAYEMDNIKKDLGDFGLEYDVYFSEKSLY--EDG 257 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG--DDVDRPLLKSDG 329 + + +L QG+VYE L +T +G DD DR L+K+DG Sbjct: 258 LVDKAMASLREQGFVYE----------------KDGALWLETTALGTGDDKDRVLIKADG 301 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 + TY +D+AY K K +RGFD +I V+G+DH GY+ RL+A A+ K Q+ VL+ ++V Sbjct: 302 TLTYLTSDIAYHKNKLDRGFDLLIDVLGADHHGYIARLKASIVAMGYKADQLEVLIMQMV 361 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 +L +G +KMSKR G ITLR ++DEVG+D+ R+ ++ R LDFDF KEQS +N Sbjct: 362 QLLNNGEVVKMSKRTGKAITLRDLIDEVGADAARYFLVMRSADSHLDFDFAVAKEQSSDN 421 Query: 450 PVFYVQYAYARCRSIFRQAKDI----FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 P++YVQYA+AR SI RQA + D++L D ++L+ LA Y Sbjct: 422 PLYYVQYAHARICSILRQAAEQENYNLDKCDYELLT----------DEYSVELLKTLAYY 471 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 P ++ A EP+++ YL +LAS FH ++ + V N + T L L+ A Sbjct: 472 PEIVAQAATNYEPHRICNYLQNLASAFHKFYNSNK-------VITENAEQTQSYLALITA 524 Query: 566 VASIINSGLNIIGVESPNEM 585 V + + L +IGV +P +M Sbjct: 525 VKITLRNALELIGVSAPEKM 544 >gi|262277231|ref|ZP_06055024.1| arginyl-tRNA synthetase [alpha proteobacterium HIMB114] gi|262224334|gb|EEY74793.1| arginyl-tRNA synthetase [alpha proteobacterium HIMB114] Length = 567 Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust. Identities = 218/577 (37%), Positives = 337/577 (58%), Gaps = 20/577 (3%) Query: 12 KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVAR 71 KN +I I ++K I+ +I +E P+ G +S NA +IL+ L P+ +A I Sbjct: 8 KNLFLKIIKDIPIDKSIIKKITVETPKQKIFGDISFNAPLILASSLKKQPMQLANEIKEL 67 Query: 72 IKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130 I+ + D + + +A GFIN K + I YG+ K K+NIEFVSA Sbjct: 68 IQAANNDFEKIEVAKPGFINFTFKKEIFLKFIKII---DKNYGKPTSTKSNKINIEFVSA 124 Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190 NPTGP+HVGHCR A+ GD L++ + F G+ V +EYYIND G QI SV++R + Sbjct: 125 NPTGPLHVGHCRGAIFGDVLSNFLKFYGHNVVKEYYINDYGNQIYLFVKSVYFRIIELQK 184 Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250 +G YPG Y+ + K++ +E ++ +E + I+ Y++++ + II+ DL Sbjct: 185 GKAFPEDQGLYPGEYIIDIAKDVLKNIKNENISSFDET-ISILTPYAIKSALDIIKKDLD 243 Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD-RKQL 309 + I HD F+SE D D + + I+ L +G VY G+LP PK D + R+QL Sbjct: 244 LMGIVHDNFVSESDIVNRDI--LSEAIEKLKNKGDVYTGVLPKPKGDAE---DWEPREQL 298 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369 LF+S+ GDDVDR L KSD ++TYFA D+AY K +R FD I ++G+DH+GYVKRL + Sbjct: 299 LFKSSKYGDDVDRALQKSDNTWTYFANDVAYHYDKLKRNFDYYINILGADHAGYVKRLSS 358 Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429 A++ K ++ L ++V+LY+ G P +MSKRAGDFI + ++D VG DS RFMM++R Sbjct: 359 AVNALNNNKT-FSIKLSQIVKLYKSGKPFRMSKRAGDFILAKDLIDAVGKDSARFMMVYR 417 Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL-FPRNVIPQE 488 ++ LDFDF V + SK+NP+FYVQYA AR S+F ++ +FD+ P E Sbjct: 418 SSNSQLDFDFDLVTDTSKDNPIFYVQYACARINSLFDKS-------NFDIEKPITDAKLE 470 Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548 + +E LI + E+P+++ E + + +YLY+L+S FH +W+ G+EN L+ + Sbjct: 471 NLKYETEFNLIKKIVEWPKIVNLCYQNLEVHYIPYYLYELSSEFHTYWNAGKENDDLKII 530 Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++++L RL L+ + ++ GLNI+ V+ +M Sbjct: 531 GHSDKELINSRLYLLQKLYLVLTIGLNILDVKVLKKM 567 >gi|241889465|ref|ZP_04776765.1| arginyl-tRNA synthetase [Gemella haemolysans ATCC 10379] gi|241863861|gb|EER68243.1| arginyl-tRNA synthetase [Gemella haemolysans ATCC 10379] Length = 545 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 216/560 (38%), Positives = 327/560 (58%), Gaps = 44/560 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E P++ +G S+N AM L+R L +P IAE I++ I+ D V+ + IAG GFIN Sbjct: 24 IHVETPKNTDNGDFSSNVAMQLTRVLRKNPRVIAEEIISNIEEDEAVEKIEIAGPGFINF 83 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 ++ S L ++ I+ +YG N IG+G KV +E+VSANPTG +HVGH R A D+LA Sbjct: 84 FVKKSSLGSVVGKILEDDFKYGENNIGQGRKVLLEYVSANPTGTLHVGHARNAAYSDSLA 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +M SGY+++REYYINDAG QIN L +S RY+QAL D+++PE Y G +K +G+ Sbjct: 144 RIMKKSGYDLSREYYINDAGNQINNLVISAITRYKQAL-GMDAEMPEDAYHGEDIKVLGQ 202 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 +L D++ LL E +++Y+V M+ I+ DL +++D+F SE + + Sbjct: 203 KLKDEFGESLL--EREDLNEFIREYAVAYEMENIKKDLGDFGLEYDVFFSEKSLY--ENG 258 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG--DDVDRPLLKSDG 329 + +++L QG+VYE L +T +G DD DR L+K+DG Sbjct: 259 LVDKALESLREQGFVYE----------------KDGALWLETTALGTGDDKDRVLIKADG 302 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 S TY +D+AY K K +RGFD ++ V+G+DH GYV RL+A A+ K Q+ L+ ++V Sbjct: 303 SLTYLTSDIAYHKNKLDRGFDLLLDVLGADHHGYVARLKASVVAMGYKADQLEALIMQMV 362 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 +L +G +KMSKR G ITLR ++DEVG+D+ R+ ++ R LDFDF KEQS +N Sbjct: 363 QLLNNGEVVKMSKRTGKAITLRDLIDEVGADAARYFLVMRSADSHLDFDFAVAKEQSSDN 422 Query: 450 PVFYVQYAYARCRSIFRQAKDI----FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 P++YVQYA+AR SI RQA + + D++L D + L+ +LA Y Sbjct: 423 PLYYVQYAHARICSILRQAAEQAEYDVKNCDYELLT----------DEYSVDLLKNLAYY 472 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 P ++ A EP+++ YL LAS FH +++ + V N++ T L L+ A Sbjct: 473 PEIVAQAAKNYEPHRICNYLQSLASSFHKFYNNNK-------VITENKEQTQSYLALITA 525 Query: 566 VASIINSGLNIIGVESPNEM 585 V + + L++IGV +P +M Sbjct: 526 VKITLRNALDLIGVSAPEKM 545 >gi|323699296|ref|ZP_08111208.1| arginyl-tRNA synthetase [Desulfovibrio sp. ND132] gi|323459228|gb|EGB15093.1| arginyl-tRNA synthetase [Desulfovibrio desulfuricans ND132] Length = 547 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 218/558 (39%), Positives = 329/558 (58%), Gaps = 36/558 (6%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 D+ VIE P+D A G +S N AM+L++ P +AE I A + D ++ + IAG GF+ Sbjct: 24 DKAVIEPPKDSAFGDMSANVAMLLAKDAKKAPRAVAEDIKAALAGDALIEKIDIAGPGFL 83 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N +P++ R+ +S+I+ G YG + +G GTKV +E+VSANPTGP+H+GH R A +GD+ Sbjct: 84 NFTFAPAFWRETVSAILDQGEAYGSSTLGNGTKVQVEYVSANPTGPLHIGHGRGAALGDS 143 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 L ++ +GY+V EYYINDAG Q+ L S+ +R +Q N ++ PE YY G Y+ + Sbjct: 144 LTRILEKAGYDVEAEYYINDAGRQMRILGGSILYRARQLGGLNPAE-PEDYYRGEYITDI 202 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 ++ +LL+ PE + K+Y + +++ I+DDL A +++HDI+ SE Sbjct: 203 ARDFM-AMRPDLLDLPEADAVEACKEYGMGVILQGIKDDLAAFHVRHDIWFSE------- 254 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 +L G V E S D F+ST++GDD DR L KS+G Sbjct: 255 --------KSLVNDGKVDETFADLTASGMGYAAD---GAFWFKSTLLGDDKDRVLRKSNG 303 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 TYFA+D+AY K++RGFD +I + G+DH GYV R+ A A+ K ++V+L LV Sbjct: 304 DTTYFASDIAYHDNKFKRGFDLVIDIWGADHHGYVPRMMAACEALG-KPGGLSVILVNLV 362 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 L RDG PI MS RAG F TL+ VVDEVGSD+ RFM L RK+ LDFD VK++S +N Sbjct: 363 NLLRDGQPIAMSTRAGQFETLKDVVDEVGSDAARFMFLSRKSDSKLDFDLELVKQKSMDN 422 Query: 450 PVFYVQYAYARCRSIFRQAKD--IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 PV+YVQYA+AR RS+ ++A++ I P + P ++ ++E+D L+L+ L +YP Sbjct: 423 PVYYVQYAHARIRSLDKKAEEAGIRPAA---VSPASLALLDTEWD---LELLKLLDQYPD 476 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 +E A Q P+ ++ YL +LAS H ++++ V + + RL L+ VA Sbjct: 477 YVEAAARTQSPHLISMYLQELASTLHRYYTNCH-------VLSAEPDVASARLMLLDCVA 529 Query: 568 SIINSGLNIIGVESPNEM 585 ++ +GL ++GV +P M Sbjct: 530 GVVANGLGLLGVNAPESM 547 >gi|311032050|ref|ZP_07710140.1| arginyl-tRNA synthetase [Bacillus sp. m3-13] Length = 556 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 220/588 (37%), Positives = 333/588 (56%), Gaps = 35/588 (5%) Query: 1 MYLFADFSSRLKNYLKE--IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58 M + RLK +K + + E++I +V+E P+D +G STN AM L+R Sbjct: 1 MNIVEQVQERLKEEIKASVLKAGLATEEQI-PAVVLETPKDKTNGDYSTNMAMQLARVAK 59 Query: 59 LDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117 P IAE IV + ++ + IAG GFIN Y+ +YL ++ +I+ +G +YGR+ I Sbjct: 60 KAPRMIAEEIVKNFDQSKASIEKIDIAGPGFINFYMDNAYLTDLIPTILKAGTDYGRSNI 119 Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 GKG K+N+EFVSANPTG +H+GH R A VGD+L +++ +GYEVTREYYINDAG QIN L Sbjct: 120 GKGEKINVEFVSANPTGDLHLGHARGAAVGDSLCNVLDKAGYEVTREYYINDAGNQINNL 179 Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237 ALSV RY QAL D ++PE Y G + +G+ +AD++ +N EE ++Y Sbjct: 180 ALSVEARYFQAL-GQDKEMPEDGYHGKDIIGIGQAIADEFGDRFVNESEEDRRSFFREYG 238 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 ++ MK ++ DL+ ++ D++ SE + + I + + L QG++YE Sbjct: 239 LKYEMKKLQQDLEEFRVRFDVWYSETSLY--NNGKIDEALATLREQGHIYE--------- 287 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 + FRST GDD +R L+K+DGSYTY D+AY + K +RG D +I + G Sbjct: 288 -------EEGATWFRSTEFGDDKNRVLIKNDGSYTYLTPDIAYHQDKLKRGHDKLINIWG 340 Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 +DH GY+ R++A A+ K + V + +LV L+++G +KMSKR G +T+R +++EV Sbjct: 341 ADHHGYIPRMKAAIEALGYGKDALEVEIIQLVHLFQNGEKMKMSKRTGKAVTMRDLMEEV 400 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G D+VR+ R LDFD QS ENPVFY QYA+AR S+ RQ ++ L+ Sbjct: 401 GLDAVRYFFAMRSGDTHLDFDMDLAVSQSNENPVFYAQYAHARICSMLRQGEEQGLSLEG 460 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 + F I E E D L+ L EYP + A + P+++ Y ++LAS H ++ Sbjct: 461 N-FALEHISSEKEID-----LLKKLGEYPLAVAEAAEKRIPHRITNYTFELASALHSFYN 514 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + A+N + + RL L+ AV + L +IGV +P +M Sbjct: 515 ------AEKVLDADNMEKSKARLGLMKAVQITLQDALKLIGVSAPEKM 556 >gi|138896975|ref|YP_001127428.1| arginyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2] gi|196249795|ref|ZP_03148491.1| arginyl-tRNA synthetase [Geobacillus sp. G11MC16] gi|166232790|sp|A4ITM9|SYR_GEOTN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|134268488|gb|ABO68683.1| Arginyl tRNA synthetase [Geobacillus thermodenitrificans NG80-2] gi|196210671|gb|EDY05434.1| arginyl-tRNA synthetase [Geobacillus sp. G11MC16] Length = 557 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 220/587 (37%), Positives = 332/587 (56%), Gaps = 32/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIK-VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + +LK +++ K V + L +++E PR+ AHG STN AM L+R Sbjct: 1 MNIVGQMKEQLKEEIRQAVGKAGLVAAEELPEVLLEVPREKAHGDYSTNIAMQLARIAKK 60 Query: 60 DPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IV + + V + +AG GFIN Y+ YL ++ +I+ +G YG + +G Sbjct: 61 PPRAIAEAIVEKFDAERVSVARIEVAGPGFINFYMDNRYLTAVVPAILQAGQAYGESNVG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV +EFVSANPTG +H+GH R A VGD+L++++A +G++VTREYYINDAG QI LA Sbjct: 121 KGEKVQVEFVSANPTGNLHLGHARGAAVGDSLSNILAKAGFDVTREYYINDAGKQIYNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 SV RY QAL D LPE Y G + +GK+LAD+Y ++ EE+ L ++Y + Sbjct: 181 KSVEARYFQAL-GTDMPLPEDGYYGDDIVEIGKKLADEYGDRFVHVDEEERLAFFREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + I++DL A + D++ SE + + I + + L +GY+YE Sbjct: 240 RYELDKIKNDLAAFRVPFDVWYSETSLY--ESGKIDEALSTLRERGYIYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 FRST GDD DR L+K DG+YTY D+AY + K RGF +I V G+ Sbjct: 288 ------QDGATWFRSTAFGDDKDRVLIKQDGTYTYLLPDIAYHQDKLRRGFTKLINVWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A AA+ + V + ++V LY++G +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMKAAIAALGYDPEALEVEIIQMVNLYQNGERVKMSKRTGKAVTMRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+VR+ R LDFD QS ENPV+YVQYA+AR SI RQAK+ + D Sbjct: 402 VDAVRYFFAMRSGDTHLDFDMDLAVAQSNENPVYYVQYAHARVSSILRQAKEHQLSYEGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + +++ E E++L+ L ++P V+ A + + P+++ Y +DLAS H ++ Sbjct: 462 VDLHHLVETE-----KEIELLKALGDFPDVVAEAALKRMPHRVTAYAFDLASALHSFYNA 516 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + + T RL LV AV + + L +IGV +P +M Sbjct: 517 E------KVLDLDQIEKTKARLALVKAVQITLQNALALIGVSAPEQM 557 >gi|218512655|ref|ZP_03509495.1| arginyl-tRNA synthetase [Rhizobium etli 8C-3] Length = 291 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 184/294 (62%), Positives = 234/294 (79%), Gaps = 4/294 (1%) Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333 R I++L +GYVY+G LPPPK + + + DR+Q LFRST VGDD+DRPL+KSDGSYTY Sbjct: 1 RTAINDLTFKGYVYKGTLPPPKGQLPEDWE-DREQTLFRSTEVGDDMDRPLIKSDGSYTY 59 Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393 FAAD+AYFK K++RGFD MIYV+G+DH GYVKRLEAVA VS KA++ VLLC+LV+LYR Sbjct: 60 FAADVAYFKNKFDRGFDEMIYVLGADHGGYVKRLEAVARGVSNGKAKLTVLLCQLVKLYR 119 Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453 +G P+KMSKR+GDF+TLR VV+EVG DSVRFMML+RKNSE LDFDF KV EQSK+NPVFY Sbjct: 120 NGEPVKMSKRSGDFVTLRDVVEEVGRDSVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFY 179 Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENA 512 VQYA+ARC S+FRQA++ FP L ++ ++ + D +ELQL+ LAE+PRV+E A Sbjct: 180 VQYAHARCMSVFRQAREAFPGL--EVSAEDLAKAVAGIGDPAELQLVAKLAEFPRVVEAA 237 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 +QEP+++AFYLYDLAS FH HW+ G++ LRFV NR+ ++ RL LV+AV Sbjct: 238 AQSQEPHRIAFYLYDLASTFHAHWNKGKDQTELRFVNDKNRESSIARLGLVYAV 291 >gi|295697794|ref|YP_003591032.1| arginyl-tRNA synthetase [Bacillus tusciae DSM 2912] gi|295413396|gb|ADG07888.1| arginyl-tRNA synthetase [Bacillus tusciae DSM 2912] Length = 557 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 220/570 (38%), Positives = 320/570 (56%), Gaps = 38/570 (6%) Query: 20 CKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DV 78 C + VE DR+ +E PRD HG S+NAAM L++ + P +A+ + + V Sbjct: 22 CGLSVEA---DRVHLEVPRDKRHGDYSSNAAMQLAKEVRRPPRALAQQLAETLDCRAAGV 78 Query: 79 DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138 + V +AG GF+N YL YL IL ++ YGR + +G++V +EFVSANPTG +H+ Sbjct: 79 ERVEVAGPGFLNFYLDTGYLDDILREVLKEKGAYGRRAVPRGSRVQVEFVSANPTGRLHI 138 Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198 GH R A GD L ++ + GYEV REYYINDAG Q++ LA+S+ RY QAL D +P+ Sbjct: 139 GHARGAAYGDALCRILEWDGYEVQREYYINDAGNQVHNLAISLEARYFQAL-GRDVPMPD 197 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y G + + + L + EEK +K ++AM++ IRDDL ++ D Sbjct: 198 DGYYGRDVVELAERLVREEGDRYAQMSEEKRYEALKQKGLEAMLQQIRDDLTRFRVRFDR 257 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + SE + + + + ++ L R+G+VYE L FRST GD Sbjct: 258 WFSERALY--ESGAVEETVEELRRRGWVYEA----------------DGALWFRSTAFGD 299 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378 D DR L+KSDGSYTY D+AY + K ERGFD +I V G DH GYV R++A AA+ Sbjct: 300 DKDRVLIKSDGSYTYLTPDIAYHRDKLERGFDRLIDVWGQDHHGYVGRMKAAVAALGGDP 359 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438 ++ V LC+LV LYR+G P++MSKR G+ +T+ ++DEVG D+ R+ +L R N +DFD Sbjct: 360 ERLVVRLCQLVALYRNGEPVRMSKRTGNAVTMAELMDEVGVDAARYFLLRRSNDSHIDFD 419 Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPRN--VIPQESEFDTSE 495 QS +NPV+YVQYA+AR SI RQA + +PD+D N V+ +E E D Sbjct: 420 LDLAVSQSNDNPVYYVQYAHARICSILRQASERGYPDVDQAAESANLRVLRREPEVD--- 476 Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555 L+ L +P +E+A A P+ + YL +LA FH ++ R V ++ Sbjct: 477 --LLKWLGNFPTEVESAAAAYAPHHIVHYLEELAKRFHSFYTSCR-------VLGEAPEI 527 Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL LV V + GL+++GV +P +M Sbjct: 528 EVARLALVRGVQWTLRVGLDLLGVAAPEQM 557 >gi|56421936|ref|YP_149254.1| arginyl-tRNA synthetase [Geobacillus kaustophilus HTA426] gi|261420805|ref|YP_003254487.1| arginyl-tRNA synthetase [Geobacillus sp. Y412MC61] gi|297531600|ref|YP_003672875.1| arginyl-tRNA synthetase [Geobacillus sp. C56-T3] gi|319768475|ref|YP_004133976.1| arginyl-tRNA synthetase [Geobacillus sp. Y412MC52] gi|81346254|sp|Q5KUF0|SYR_GEOKA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|56381778|dbj|BAD77686.1| arginyl-tRNA synthetase [Geobacillus kaustophilus HTA426] gi|261377262|gb|ACX80005.1| arginyl-tRNA synthetase [Geobacillus sp. Y412MC61] gi|297254852|gb|ADI28298.1| arginyl-tRNA synthetase [Geobacillus sp. C56-T3] gi|317113341|gb|ADU95833.1| arginyl-tRNA synthetase [Geobacillus sp. Y412MC52] Length = 557 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 216/555 (38%), Positives = 320/555 (57%), Gaps = 31/555 (5%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFIN 90 +++E PRD AHG STN AM L+R P IAE IV ++ + V + IAG GFIN Sbjct: 33 VLLEVPRDKAHGDYSTNIAMQLARIAKKPPRAIAEAIVGQLDRERMSVARIEIAGPGFIN 92 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 Y+ YL ++ +I+ +G YG + +G G KV +EFVSANPTG +H+GH R A VGD+L Sbjct: 93 FYMDNRYLTAVVPAILQAGQAYGESNVGNGEKVQVEFVSANPTGDLHLGHARGAAVGDSL 152 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +++A +G++VTREYYINDAG QI LA SV RY QAL D LPE Y G + +G Sbjct: 153 CNILAKAGFDVTREYYINDAGKQIYNLAKSVEARYFQAL-GVDMPLPEDGYYGDDIVEIG 211 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K+LA++Y + EE+ L +DY ++ ++ I+ DL + D++ SE + + Sbjct: 212 KKLAEEYGDRFVEMEEEERLAFFRDYGLRYELEKIKKDLADFRVPFDVWYSETSLY--ES 269 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I + + L +GY+YE + T FRST GDD DR L+K DG+ Sbjct: 270 GKIDEALSTLRERGYIYE------QDGAT----------WFRSTAFGDDKDRVLIKQDGT 313 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTY D+AY + K RGF +I + G+DH GY+ R++A AA+ + V + ++V Sbjct: 314 YTYLLPDIAYHQDKLRRGFKKLINIWGADHHGYIPRMKAAIAALGYDPEALEVEIIQMVN 373 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 LY++G +KMSKR G +T+R +++EVG D+VR+ R LDFD QS ENP Sbjct: 374 LYQNGERVKMSKRTGKAVTMRELMEEVGVDAVRYFFAMRSGDTHLDFDMDLAVSQSNENP 433 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+YVQYA+AR SI RQA++ D DL +++ E E++L+ L ++P V+ Sbjct: 434 VYYVQYAHARVSSILRQAEEQHISYDGDLALHHLVETE-----KEIELLKVLGDFPDVVA 488 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A + + P+++ Y +DLAS H ++ + + +N + T RL LV AV + Sbjct: 489 EAALKRMPHRVTAYAFDLASALHSFYNAE------KVLDLDNIEKTKARLALVKAVQITL 542 Query: 571 NSGLNIIGVESPNEM 585 + L +IGV +P +M Sbjct: 543 QNALALIGVSAPEQM 557 >gi|302392974|ref|YP_003828794.1| arginyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501] gi|302205051|gb|ADL13729.1| arginyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501] Length = 561 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 213/556 (38%), Positives = 323/556 (58%), Gaps = 30/556 (5%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 D +++E PR+ HG +TN AM+L+ G+ P IA++IV + V V IAG GFI Sbjct: 36 DDVMLEVPREEGHGDYATNIAMVLAGQAGMAPRDIAQVIVDNLAELELVSKVEIAGPGFI 95 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N YL +L +I+ +++ +YG++ G G KV IEFVSANPTGP+HVGH R AV GD Sbjct: 96 NFYLVDEWLYQIIETVLNEKEDYGKSNFGNGKKVQIEFVSANPTGPLHVGHGRGAVAGDV 155 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 L ++M+ +G++V +EYYINDAG Q+ L SV RYQ+ L D +PE Y G Y++ + Sbjct: 156 LGNIMSAAGFDVAKEYYINDAGNQMELLGKSVALRYQE-LLGADITMPENSYQGDYIEKI 214 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 ++ +Y + L ++ ++++ + ++ I+ DL+A I+ D + SE H+ D Sbjct: 215 AAKIETEYGDKYLTDVQDGNYEFFREFAYEQLLANIKADLQAFGIEFDNWFSERKLHQED 274 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 I +++ L GY+YE + L +ST GDD DR ++K +G Sbjct: 275 K--IGEVVAQLKEDGYLYE----------------EEGALWLKSTDFGDDKDRVVIKDNG 316 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 TY AAD+AY KY+RGF+ +I V G+DH GY+ R++A A+ + V++ ++V Sbjct: 317 VPTYLAADIAYHDNKYQRGFEEVINVWGADHHGYIARMKAAVEALGYSPEMLKVIIVQMV 376 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 L RDG + MSKRAGDFITLR VVDEVG D+ R+ + R LDFD KE+S EN Sbjct: 377 TLLRDGKQVSMSKRAGDFITLRDVVDEVGCDAARYFYVMRSTDSHLDFDLDLAKEESAEN 436 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 PV+Y+QYA+AR SI Q K ++ D+ ++ ++E EL LI L +YP + Sbjct: 437 PVYYIQYAHARICSILDQIKKEEIKIE-DVSGVDLERLDTEV---ELDLIQKLGDYPEEL 492 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 + ++EP+ +A Y Y+LA+ FH ++ V + ++ RLQLV AV + Sbjct: 493 AESAKSREPHHMARYAYELAAQFHSFYNKCH-------VLIQDEEVMQARLQLVLAVKQV 545 Query: 570 INSGLNIIGVESPNEM 585 +++ LNI+GV +P M Sbjct: 546 LSNLLNILGVSAPESM 561 >gi|229542451|ref|ZP_04431511.1| arginyl-tRNA synthetase [Bacillus coagulans 36D1] gi|229326871|gb|EEN92546.1| arginyl-tRNA synthetase [Bacillus coagulans 36D1] Length = 558 Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust. Identities = 224/589 (38%), Positives = 334/589 (56%), Gaps = 35/589 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIK-VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + LK +KE K V + + IV+E+P++ AHG + N AM L+R Sbjct: 1 MNIAEQMQETLKTEIKEAVMKTGLVAEADIPAIVLEKPKEKAHGDYAANIAMQLARTAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IV I K ++ V IAG GFIN YL +YL +++ SI+ G +YGR+ G Sbjct: 61 APRQIAEAIVEHIDKSKTSIEKVEIAGPGFINFYLDNTYLTRLIPSILHDGADYGRSDAG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G K+ +EFVSANPTG +H+GH R A VGD+L +++ +GYEVTREYYINDAG QI+ LA Sbjct: 121 GGKKIQVEFVSANPTGDLHLGHARGAAVGDSLCNILEKAGYEVTREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL + ++P Y G + +GK+LAD+Y + ++ E+ + Y + Sbjct: 181 LSVEARYFQAL-GIEKEMPADGYYGQDIIDLGKKLADEYGRKFVDTDEKTRYEFFRQYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 M ++ DL+ ++ D++ SE ++ I +++ + +G++YE K Sbjct: 240 DYEMAKLKKDLEDFRVRFDVWYSETSLYK--SGKIDEMLKLMREKGHIYE------KDGA 291 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 T FRST GDD DR L+K+DG+YTY D+AY K K++RGFD +I + G+ Sbjct: 292 T----------WFRSTAFGDDKDRVLIKNDGTYTYLTPDIAYHKDKFDRGFDTLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ + V + +LV LY++G +KMSKR G +T+R ++DEVG Sbjct: 342 DHHGYIPRMKAAMEALGYNSDNLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRELIDEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA--KDIFPDLD 476 D+ R+ R + LDFD +S ENPV+Y QYA+AR SI RQA K PD D Sbjct: 402 LDATRYFFAMRSSDTHLDFDLDLAVSESNENPVYYAQYAHARICSILRQAVEKGFAPDTD 461 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 +VI E E D ++ L E+P+VI A + P+++ Y+ +LA+ FH + Sbjct: 462 AHA-DFSVIRSEKETD-----VLKKLGEFPQVIAEAAEKRIPHRITNYINELAANFHSFY 515 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++ + + T RL LV AV + + L +IGV +P +M Sbjct: 516 N------AVKVIDPAHADATKARLALVKAVQITLKNALQLIGVSAPEKM 558 >gi|317052384|ref|YP_004113500.1| arginyl-tRNA synthetase [Desulfurispirillum indicum S5] gi|316947468|gb|ADU66944.1| arginyl-tRNA synthetase [Desulfurispirillum indicum S5] Length = 556 Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust. Identities = 204/563 (36%), Positives = 321/563 (57%), Gaps = 34/563 (6%) Query: 25 EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84 E + L I+IE P++ + G + AM L++ +G P IA+ I+A + ++ V IA Sbjct: 26 EGQGLPEIIIENPKEKSFGDFACTIAMPLAKIMGQPPRAIAQAIMAHLS-HSAIEKVEIA 84 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 G GF+N ++ P+ ++L +I+ G +YGR+ +G+ +V +EFVSANPTGP+H+GH R A Sbjct: 85 GPGFMNFFVRPAASLEVLKTILREGEQYGRSAVGQNRRVMVEFVSANPTGPLHIGHGRGA 144 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204 VGD +A ++ ++GY V REYYINDAG Q+N L LS + RY Q L + + L E Y G Sbjct: 145 AVGDAIARILEYAGYNVHREYYINDAGNQMNNLGLSTYIRYMQLLGHEEMTLEESCYQGD 204 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 Y+ + +++ KY + + +P + +++ I+DDL+ + D + SE D Sbjct: 205 YITDIARDVLTKYGRKFEG--DRSSIPFFTTLTGDVILQGIKDDLQRFRVSFDHYFSEKD 262 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 H + + +D L G YE + L R+T GDD DR + Sbjct: 263 LH--EQGHVSRELDQLQTAGKAYE----------------EGDALWVRTTAFGDDKDRVV 304 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 + +G TYFAAD+AY + K++RGFD +I + G+DH GYV RL+A + + V+ Sbjct: 305 RRGNGETTYFAADIAYHRNKFQRGFDTLIDIWGADHHGYVNRLKAAVNLLDRNPDDLEVI 364 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L +LV L R G+P+ MS R+G+F LR V+DEVG+D+ R+ L R+ LDFD K+ Sbjct: 365 LIQLVSLQRAGVPVAMSTRSGEFDALRDVLDEVGTDAARYFFLMRRCDSHLDFDLELAKQ 424 Query: 445 QSKENPVFYVQYAYARCRSIFRQ--AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 Q+ +NPVFYVQY +ARC SI Q A D +P + D +V+ E E D +++ L Sbjct: 425 QTNDNPVFYVQYCHARCCSIIEQLKANDKYPQQNLDAIDFSVMDTEQEKDLAKV-----L 479 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 + V+E A +A+EP+++ YL ++AS FH ++ R + A ++L R + Sbjct: 480 GRFTEVVEGAALAREPHRIPHYLNEVASAFHSFYN------VCRVMNAPTQELLTARTIM 533 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 V A I+ +GL++IG+++P M Sbjct: 534 VEATRQIVCNGLHVIGIDAPQRM 556 >gi|251794170|ref|YP_003008901.1| arginyl-tRNA synthetase [Paenibacillus sp. JDR-2] gi|247541796|gb|ACS98814.1| arginyl-tRNA synthetase [Paenibacillus sp. JDR-2] Length = 559 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 218/563 (38%), Positives = 320/563 (56%), Gaps = 41/563 (7%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKG 87 L V+E P+D AHG L+TNAAM L++ +P IAE I+A + + + S IAG G Sbjct: 32 LPAFVLEVPKDKAHGDLATNAAMQLTKLAKKNPRQIAETIIANLNGEKFGIQSAEIAGPG 91 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FIN + SYL ++ I +G +YGR G G +V +EFVSANPTG +H+GH R A VG Sbjct: 92 FINFRMDKSYLYSVVGEITAAGDDYGRTKEGSGQRVEVEFVSANPTGNLHLGHARGAAVG 151 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D L +++ F+GYEVTREYYINDAG Q+N LA S+ RY+QAL D+++PE Y G + Sbjct: 152 DALCNVLDFAGYEVTREYYINDAGNQVNNLARSIEARYRQAL-GQDAEMPEDGYHGEDIV 210 Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 GK LA++ LL+ +E+ + + ++ + I+ DL + DI+ SE + Sbjct: 211 GFGKLLAEEKGDSLLSLSDEERFAFFRQFGLEKELDKIKRDLGLFRVNFDIWYSETSLY- 269 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM-VGDDVDRPLLK 326 + + ++ L +G VYE + + STM GDD +R L+K Sbjct: 270 -ESGQVETALEALKAKGQVYE-----------------EEGATWLSTMPYGDDKNRVLVK 311 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386 +DGSYTY D+AY + K+ RG+D MI + G+DH GY+ R++A AA+ ++ VL+ Sbjct: 312 NDGSYTYLTPDIAYHQDKFSRGYDKMINIWGADHHGYIPRVKAAMAALGNDPDKLVVLIA 371 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446 ++V L++DG +KMSKR G +T++ ++DEVG D++R+ R LDFD S Sbjct: 372 QMVSLFQDGEKVKMSKRTGKAVTMQDLMDEVGVDAIRYFFTMRSMDSHLDFDMDLAISTS 431 Query: 447 KENPVFYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 ENPVFYVQYA+AR SIFRQA++ I P D D + E+EFD L+ L Sbjct: 432 NENPVFYVQYAHARICSIFRQAEEQSVAILPIGDIDF---GKLSSEAEFD-----LLRKL 483 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 E P+ + A P++L Y+Y+LAS FH ++ R V + T R+ L Sbjct: 484 GELPQEVSEAAAQYAPHRLIRYVYELASQFHSYYKAER-------VITEDAAQTQARIAL 536 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 + AV +I + L ++GV +P M Sbjct: 537 LGAVRIVIANTLRLVGVSAPERM 559 >gi|317130799|ref|YP_004097081.1| arginyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522] gi|315475747|gb|ADU32350.1| arginyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522] Length = 555 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 209/556 (37%), Positives = 321/556 (57%), Gaps = 35/556 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFIN 90 +VIE P++ HG +TN AM L+R P IA+ IVA K V+ + IAG GFIN Sbjct: 33 VVIESPKEKEHGDYATNMAMQLARIAKKAPRMIADDIVANFNKEAASVEKIEIAGPGFIN 92 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 ++ YL +I+S+++ G +G+ +G+G ++ +EFVSANPTG +H+GH R A VGD+L Sbjct: 93 FFMKKDYLSEIVSTVLKQGNAFGKVNVGEGKRLQVEFVSANPTGTLHLGHARGAAVGDSL 152 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +++ +GY+V REYYINDAG QI LA S+ RY QAL D +PE Y G + Sbjct: 153 CNILEKAGYDVAREYYINDAGNQIENLARSIDARYLQAL-GKDVPMPEDGYHGQDIIGFA 211 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 KE+AD Y ++ E++ L ++Y ++ + +++DL + D + SE + + Sbjct: 212 KEIADTYGDRFIDAEEKERLAFFREYGLKRELDKLKEDLADFRVNFDHWYSETSLYTTEK 271 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + D++ L +G YE + + FRST GDD DR L+KSDGS Sbjct: 272 --VTDVLTELKNRGETYE----------------EDGAVWFRSTTYGDDKDRVLVKSDGS 313 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTY D++Y K K+ RGF+ +I + G+DH GY+ R++A A+ +K Q++V + ++V Sbjct: 314 YTYLTPDISYHKDKFARGFEELINIWGADHHGYIPRMKAAIQALGYEKEQLSVQIIQMVN 373 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L+ +G +KMSKR G +T+R +++EVG D+ R+ R LDFD K QS ENP Sbjct: 374 LFENGEKVKMSKRTGKAVTMRDLMEEVGIDATRYFFAMRAADTHLDFDMSLAKSQSTENP 433 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 V+YVQYA+AR S+ RQA+D+ ++D F R + E E D L+ L EYP + Sbjct: 434 VYYVQYAHARICSMLRQARDLGYEVDPHAQFER--LTAEKELD-----LMKKLGEYPEAV 486 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 +A + P+++A Y+YDLA H ++ + V + +LT RL L+ AV + Sbjct: 487 ADAAKKRAPHRMANYVYDLAQTLHSFYNAEK-------VINEDSELTKARLGLMEAVRAT 539 Query: 570 INSGLNIIGVESPNEM 585 + L ++GVE+P +M Sbjct: 540 LQDALKLVGVEAPEKM 555 >gi|242281146|ref|YP_002993275.1| arginyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638] gi|259511640|sp|C6BU27|SYR_DESAD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|242124040|gb|ACS81736.1| arginyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638] Length = 547 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 209/559 (37%), Positives = 330/559 (59%), Gaps = 38/559 (6%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 ++ VIE P+D G +S N AM+LS+ ++P IAE I + + D ++ V IAG GF+ Sbjct: 24 EKAVIEPPKDKKFGDMSANIAMMLSKQAKMNPRAIAETIQSELDGDKYIEKVDIAGPGFL 83 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N S S+ + ++ ++ G +YGR+ IGK TK+ +E+VSANPTGP+H+GH R A +GD Sbjct: 84 NFTFSNSFWQDLIPEVLTKGEDYGRSEIGKDTKIQVEYVSANPTGPLHIGHGRGAALGDC 143 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 L ++ F+GY+V EYY+NDAG Q+ L S++ R QQ+ + +D PE +Y G Y+K + Sbjct: 144 LVRILEFTGYDVEAEYYVNDAGRQMLILGTSIWVRLQQSQGRDIAD-PEDFYKGEYIKDL 202 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 E+ ++ + +L+ +++ + I ++Y +++ I+ DL A +++HD++ SE + Sbjct: 203 AAEVLER-NPGILDMSDDEAIAICREYGKDEILEGIKKDLAAFDVRHDVWFSEKSLVTAN 261 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + + +L +G YE + L F+ST +GDD DR L KS+G Sbjct: 262 --KVEETFADLKARGMAYE----------------EDGALWFKSTELGDDKDRVLRKSNG 303 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 TYFA+D+AY KY+RGFD ++ + G+DH GY+ R++A A+ KK Q++V+L +LV Sbjct: 304 DLTYFASDIAYHDDKYKRGFDIVVDIWGADHHGYIPRMQAAVEALG-KKGQLDVILVQLV 362 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 L R G I MS RAG F TL VV+EVG D+ RFM L RK+ LDFD VK+++ +N Sbjct: 363 NLLRGGEQIAMSTRAGKFETLEDVVNEVGRDASRFMFLSRKSDSHLDFDLELVKQKTMDN 422 Query: 450 PVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 PV+YVQYA+AR S+ R+A D P +D P + + EL L+ + ++ Sbjct: 423 PVYYVQYAHARICSVMRKAADQGIAVPAID-------AAPLSALTNAEELNLMKLMDQFA 475 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 V ENA P+ +++YL DLAS H +S + + + + + RL L+ AV Sbjct: 476 DVAENAGKNMSPHVISYYLRDLASALHRFYS-------MHHILSADEDVIAARLVLLQAV 528 Query: 567 ASIINSGLNIIGVESPNEM 585 A + +GL+++GV +P M Sbjct: 529 ARTLANGLSLLGVSAPESM 547 >gi|303248045|ref|ZP_07334311.1| arginyl-tRNA synthetase [Desulfovibrio fructosovorans JJ] gi|302490602|gb|EFL50507.1| arginyl-tRNA synthetase [Desulfovibrio fructosovorans JJ] Length = 552 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 218/559 (38%), Positives = 329/559 (58%), Gaps = 35/559 (6%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA-ELIVARIKIDPDVDSVFIAGKGFI 89 + IE PRD +HG L+TN AM+ ++ + P +A EL + PD+ V +AG GFI Sbjct: 25 KTTIEAPRDKSHGDLATNVAMMATKAAKMPPRQLAGELREELLAASPDLADVAVAGPGFI 84 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N+ +P + ++ + + SG YGR IG+GT++ +EFVSANPTGP+H+GH R A VGD+ Sbjct: 85 NVTFTPGFWQRTVLDVAGSGDRYGRLNIGEGTRIQVEFVSANPTGPLHIGHGRGAAVGDS 144 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 LA ++ +G+ V EYYINDAG Q+ L S+ +R ++ L D PE YY G Y+K + Sbjct: 145 LARVLRAAGFAVETEYYINDAGRQMRILGQSILYRCRE-LAGKDVTEPEDYYRGDYVKEL 203 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 +EL D+ LL+ PE+K I + Y + ++ I+ DL+ + HD++ E Sbjct: 204 ARELLDREGEGLLDLPEDKATDICRLYGEKEILDGIKKDLREFRVGHDVWFPESKLFAA- 262 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + D+L + Y D D L F +T GDD DR L+KS G Sbjct: 263 -GAVARTFDDLRAKNLAY---------------DKD-GALWFATTNFGDDKDRVLVKSGG 305 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCEL 388 TYFA+D+AY K+ RGFD ++ + G+DH GYV R++A AA+ + + + V+L +L Sbjct: 306 DLTYFASDIAYHDDKFRRGFDVVVDIWGADHHGYVPRMKACVAALGRDPETSLKVILVQL 365 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V L + G I MS RAG F TL VV EVG+D+ RFM L RK+ LDFD VKE+S + Sbjct: 366 VNLLKGGEQIAMSTRAGKFETLADVVAEVGADAARFMFLSRKSDSHLDFDLDAVKEKSMD 425 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ-ESEFDT-SELQLIVHLAEYP 506 NPV+YVQYA+AR +S+F +A + + PR P+ S+ DT +L+L+ L +YP Sbjct: 426 NPVYYVQYAHARVKSLFAKAA------ERGVTPREATPELLSKLDTPEDLELLKLLEQYP 479 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 + +A P+ ++FYL DLA H +++ NP L + + +LT+ RL L+ AV Sbjct: 480 DTVASAARTFAPHLVSFYLRDLAGQLHRYYT---VNPVL---ASGDAELTVARLALLDAV 533 Query: 567 ASIINSGLNIIGVESPNEM 585 A+++ +GL+++GV +P++M Sbjct: 534 ATVVRNGLDLLGVSAPDKM 552 >gi|16080786|ref|NP_391614.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|221311696|ref|ZP_03593543.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|221316022|ref|ZP_03597827.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320933|ref|ZP_03602227.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. JH642] gi|221325218|ref|ZP_03606512.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SMY] gi|2851477|sp|P46906|SYR_BACSU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|2224756|emb|CAB09703.1| arginyl tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|2636270|emb|CAB15761.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|291486320|dbj|BAI87395.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195] Length = 556 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 218/589 (37%), Positives = 333/589 (56%), Gaps = 43/589 (7%) Query: 6 DFSSRLKNYLKEIDCKIKV------EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 + + ++K+ LKE + K V E+ + +V+E P+D HG STN AM L+R Sbjct: 2 NIAEQMKDVLKE-EIKAAVLKAGLAEESQIPNVVLETPKDKTHGDYSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IVA K ++ + IAG GFIN Y++ YL K++ S++ +G YG IG Sbjct: 61 APRQIAEEIVAHFDKGKASIEKLDIAGPGFINFYMNNQYLTKLIPSVLEAGEAYGETNIG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G +V +EFVSANPTG +H+GH R A VGD+L ++++ +GY+V+REYYINDAG QIN LA Sbjct: 121 NGERVQVEFVSANPTGDLHLGHARGAAVGDSLCNVLSKAGYDVSREYYINDAGNQINNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY +AL + +PE Y G + +GK LA++Y +N E + L ++Y + Sbjct: 181 LSVEVRYFEAL-GLEKPMPEDGYRGEDIIAIGKRLAEEYGDRFVNEEESERLAFFREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + ++ +R DL+ + D++ SE ++ I ++ L +G+VYE Sbjct: 240 KYELEKLRKDLENFRVPFDVWYSETSLYQN--GKIDKALEALREKGHVYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRST GDD DR L+K DG+YTY D+AY K K +RGFD +I V G+ Sbjct: 288 ------EDGATWFRSTTFGDDKDRVLIKKDGTYTYLLPDIAYHKDKLDRGFDKLINVWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ +K + V + +LV LY++G +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMKAAIEALGYEKGTLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD--IFPDLD 476 D+VR+ R +DFD S ENPV+Y QYA+AR S+ RQ ++ + P D Sbjct: 402 LDAVRYFFAMRSADTHMDFDLDLAVSTSNENPVYYAQYAHARICSMLRQGEEQGLKPAAD 461 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 D + I E E+D L+ + +P + A + P+++ Y+YDLAS H + Sbjct: 462 LDF---SHIQSEKEYD-----LLKTIGGFPEAVAEAAEKRIPHRVTNYIYDLASALHSFY 513 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + N + + RL L+ A +N+ L +IGV +P +M Sbjct: 514 N------AEKVIDPENEEKSRARLALMKATQITLNNALQLIGVSAPEKM 556 >gi|319650937|ref|ZP_08005072.1| arginyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2] gi|317397293|gb|EFV77996.1| arginyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2] Length = 555 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 211/588 (35%), Positives = 334/588 (56%), Gaps = 36/588 (6%) Query: 1 MYLFADFSSRLKNYLKE--IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58 M + +LK +K+ + + E++I D +++E P++ AHG STN AM L+R Sbjct: 1 MNIVEQVQDKLKQEIKDAVVKAGLAAEEQIPD-VILEIPKEKAHGDYSTNMAMQLARVAK 59 Query: 59 LDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117 P IAE ++A ++ + IAG GFIN Y++ SYL ++ +++ +G +YG + Sbjct: 60 KAPRMIAEELIAHFDSSKASIEKIEIAGPGFINFYMNNSYLTDLIPAVLEAGDQYGETTV 119 Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 G K+ +EFVSANPTG +H+GH R A VGD+L +++ +GYEV+REYYINDAG QIN L Sbjct: 120 GNSQKIQVEFVSANPTGDLHLGHARGAAVGDSLCNILDKAGYEVSREYYINDAGNQINNL 179 Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237 ALSV RY QAL + ++P Y G + +GK+LAD+Y + ++ E++ ++Y Sbjct: 180 ALSVEARYFQAL-GLEKEMPADGYHGEDIIGIGKKLADEYGDKYVHADEKERFDFFREYG 238 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 ++ M ++ DL+ + D++ SE + + I + L G++YE Sbjct: 239 LKYEMAKLKQDLEDFRVPFDVWYSETSLY--NNGKIDTALQALKDNGHIYE--------- 287 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 + FRST GDD DR L+K+DGSYTY D+AY K K ERGF+ +I + G Sbjct: 288 -------EEGATWFRSTAFGDDKDRVLIKNDGSYTYLTPDIAYHKDKLERGFEKLINIWG 340 Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 +DH GY+ R++A A+ + + V + +LV LY++G +KMSKR G +T+R +V+EV Sbjct: 341 ADHHGYIPRMKAAIQALGYDREALEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLVEEV 400 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G D+ R+ R LDFD QS ENPV+Y QYA+AR SI RQ ++ + Sbjct: 401 GLDATRYFFAMRSADTHLDFDLDLAVSQSNENPVYYAQYAHARISSILRQGEE--QGMSA 458 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 + ++I E E D ++ + E+P+ + A + P+++ Y+Y+LAS FH ++ Sbjct: 459 EAADYSLIQAEKEID-----VLKKIGEFPQAVGEAAQKRMPHRITNYIYELASSFHSFYN 513 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + A N + T RL L+ AV + + + L +IGV +P +M Sbjct: 514 ------AEKVLDAENPERTKARLALIKAVQTTLKNALKLIGVSAPEKM 555 >gi|321313283|ref|YP_004205570.1| arginyl-tRNA synthetase [Bacillus subtilis BSn5] gi|320019557|gb|ADV94543.1| arginyl-tRNA synthetase [Bacillus subtilis BSn5] Length = 556 Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust. Identities = 218/589 (37%), Positives = 332/589 (56%), Gaps = 43/589 (7%) Query: 6 DFSSRLKNYLKEIDCKIKV------EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 + + ++K+ LKE + K V E+ + +V+E P+D HG STN AM L+R Sbjct: 2 NIAEQMKDVLKE-EIKAAVLKAGLAEESQIPNVVLETPKDKTHGDYSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IVA K ++ + IAG GFIN Y++ YL K++ S++ +G YG IG Sbjct: 61 APRQIAEEIVAHFDKGKASIEKLDIAGPGFINFYMNNQYLTKLIPSVLEAGEAYGETNIG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G +V +EFVSANPTG +H+GH R A VGD+L ++++ +GY+V+REYYINDAG QIN LA Sbjct: 121 NGERVQVEFVSANPTGDLHLGHARGAAVGDSLCNVLSKAGYDVSREYYINDAGNQINNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY +AL + +PE Y G + +GK LA++Y +N E + L ++Y + Sbjct: 181 LSVEVRYFEAL-GLEKPMPEDGYRGEDIIAIGKRLAEEYGDRFVNEEESERLAFFREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + +R DL+ + D++ SE ++ I ++ L +G+VYE Sbjct: 240 KYELDKLRKDLENFRVPFDVWYSETSLYQN--GKIDTALEALREKGHVYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRST GDD DR L+K DG+YTY D+AY K K +RGFD +I V G+ Sbjct: 288 ------EDGATWFRSTTFGDDKDRVLIKKDGTYTYLLPDIAYHKDKLDRGFDKLINVWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ +K + V + +LV LY++G +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMKAAIEALGYEKGTLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD--IFPDLD 476 D+VR+ R +DFD S ENPV+Y QYA+AR S+ RQ ++ + P D Sbjct: 402 LDAVRYFFAMRSADTHMDFDLDLAVSTSNENPVYYAQYAHARICSMLRQGEEQGLKPAAD 461 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 D + I E E+D L+ + +P + A + P+++ Y+YDLAS H + Sbjct: 462 LDF---SHIQSEKEYD-----LLKTIGGFPEAVAEAAEKRIPHRVTNYIYDLASALHSFY 513 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + N + + RL L+ A +N+ L +IGV +P +M Sbjct: 514 N------AEKVIDPENEEKSRARLALMKATQITLNNALQLIGVSAPEKM 556 >gi|312879774|ref|ZP_07739574.1| arginyl-tRNA synthetase [Aminomonas paucivorans DSM 12260] gi|310783065|gb|EFQ23463.1| arginyl-tRNA synthetase [Aminomonas paucivorans DSM 12260] Length = 558 Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust. Identities = 211/558 (37%), Positives = 317/558 (56%), Gaps = 34/558 (6%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 R+++ERPR G + NAAM L++ L P +A + R+ D + +AG GF+N Sbjct: 32 RVLLERPRRSGQGDWACNAAMQLAKTFSLSPRDLATQLAERLGKDDLLAGAEVAGPGFLN 91 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 L LSP ++++++ I+ +YGR +G+G KV +EFVSANPTGP+H+GH R A VGD Sbjct: 92 LTLSPVWVKELVGRILDQKEDYGRVDVGRGRKVQVEFVSANPTGPLHMGHGRGAAVGDIA 151 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND-SDLPEGYYPGVYLKHV 209 AS++AF+G++V REYYINDAG Q+ L S RY + L D + LPE Y G Y+ + Sbjct: 152 ASVLAFAGWKVEREYYINDAGLQMELLGRSARSRYFELLGRGDEAPLPEDGYHGEYMTDL 211 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 +++ ++ + PEE+ LP D + + ++ IR DL+A + D++ SE ++ D Sbjct: 212 ARQILEEEGPGWADLPEEEALPRFSDATAKRVLDWIRRDLEAFGVVFDVWFSEKSLYQDD 271 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 ++ I+ L +GY Y D D + FRST GDD DR +++S+G Sbjct: 272 Q--VQRAIEALKGRGYAY---------------DAD-GAVWFRSTAFGDDKDRVMIRSNG 313 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 + TYF +D+ Y K KY+RGFD ++ V G+DH GY+ R+++ +A+ + V+L +LV Sbjct: 314 APTYFTSDVVYHKNKYDRGFDLVVNVWGADHHGYIPRMKSAVSAMGRDPEDLQVMLIQLV 373 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 L R G P+ MSKRAG FITL+ V+DEVG D+ RF + R+ LDFD K+ S +N Sbjct: 374 NLLRGGEPVSMSKRAGTFITLQDVMDEVGVDATRFFFVMRRCDSHLDFDLELAKKSSSDN 433 Query: 450 PVFYVQYAYARCRSIFR--QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 PVFYVQYA+AR SI R +A+ + DL P + E EL L LA +P Sbjct: 434 PVFYVQYAHARICSILRETEARGLPSPTPEDLDPNLLSTPE------ELALATVLARFPE 487 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 I A EP+++A+Y +LA FHG ++ R + L R+ L+ A Sbjct: 488 EIRKAAEGLEPHRVAYYAQELAEAFHGFYNAAR-------ILGVEEPLRKARMLLLEATR 540 Query: 568 SIINSGLNIIGVESPNEM 585 + + L ++GV +P M Sbjct: 541 ITLVNALRLLGVRAPERM 558 >gi|288554437|ref|YP_003426372.1| arginyl-tRNA synthetase [Bacillus pseudofirmus OF4] gi|288545597|gb|ADC49480.1| arginyl-tRNA synthetase [Bacillus pseudofirmus OF4] Length = 556 Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust. Identities = 204/559 (36%), Positives = 319/559 (57%), Gaps = 32/559 (5%) Query: 28 ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGK 86 +L +V+E P+D AHG +TN AM L+R P IAE + +++ K + + IAG Sbjct: 29 VLPEVVLEAPKDKAHGDYATNMAMQLARIAKKAPRQIAEELTSQLDKEKASIQKIDIAGP 88 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GFIN +++ SYLR+I+ +++ + YG +G G K+ +EFVSANPTG +H+GH R A V Sbjct: 89 GFINFFMNKSYLREIVPAVLSAKEAYGETNVGNGEKIQVEFVSANPTGSLHLGHARGAAV 148 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206 GD L ++++ +GY+V REYYINDAG QIN LALS+ RY QAL D ++PE Y G + Sbjct: 149 GDALCNVLSKAGYDVEREYYINDAGNQINNLALSLEARYFQAL-GQDKEMPEEGYRGQDI 207 Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 GK LA+++ + +N E + + Y +Q + I+ DLK ++ D + SE + Sbjct: 208 VDFGKALAEEHGDKYVNVSESERREFFRQYGLQKELDKIKSDLKEFRVEFDNWFSETSLY 267 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 + + + ++++ L +G YE FRST GDD DR L+K Sbjct: 268 --ESNKVIEVLETLDEKGETYE----------------QDGATWFRSTTYGDDKDRVLIK 309 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386 +DG+YTY D+AY + K +RGFD +I + G+DH GY+ R+ A A+ Q V + Sbjct: 310 NDGTYTYLTPDIAYHQDKMQRGFDKLINIWGADHHGYIPRMRAAIQALGYSPEQFEVQII 369 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446 ++V LY+ G +KMSKR G +TLR ++DEVG D+VR+ R LDFD +S Sbjct: 370 QMVSLYQGGEKVKMSKRTGKAVTLRDLMDEVGIDAVRYFFAMRSADSQLDFDMDLAVSKS 429 Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 ENPVFYVQYA+AR S+ RQ +++ D D + + + E E+D L+ + ++P Sbjct: 430 NENPVFYVQYAHARVCSMLRQGEELGLDYDENT-DLSAVSTEKEYD-----LLKAIGDFP 483 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 ++ A + P+++ Y +DLAS H ++ R + + ++ + RL L+ A Sbjct: 484 AIVAEAAEKKMPHRITNYAHDLASALHSFYNAE------RVIDSEDQDKSKARLALMKAT 537 Query: 567 ASIINSGLNIIGVESPNEM 585 I + L+++GV +P +M Sbjct: 538 QITIQNALSLVGVSAPEKM 556 >gi|52082258|ref|YP_081049.1| arginyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|52787649|ref|YP_093478.1| arginyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|319648132|ref|ZP_08002349.1| arginyl-tRNA synthetase [Bacillus sp. BT1B_CT2] gi|81384315|sp|Q65DS9|SYR_BACLD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|52005469|gb|AAU25411.1| arginyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|52350151|gb|AAU42785.1| ArgS [Bacillus licheniformis ATCC 14580] gi|317389767|gb|EFV70577.1| arginyl-tRNA synthetase [Bacillus sp. BT1B_CT2] Length = 556 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 218/579 (37%), Positives = 329/579 (56%), Gaps = 37/579 (6%) Query: 11 LKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69 LK +KE K + E+ + +V+E P+D +HG STN AM L+R P IAE IV Sbjct: 11 LKQEIKEAVMKAGLAEESEIPEVVLEVPKDKSHGDYSTNMAMQLARIAKKAPRNIAEEIV 70 Query: 70 ARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128 A K +D + IAG GFIN Y++ YL K++ +++ +G YG IG G +V +EFV Sbjct: 71 ASFDKGKASIDKLDIAGPGFINFYMNNQYLTKLIPAVLEAGEAYGETNIGGGERVQVEFV 130 Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188 SANPTG +H+GH R A VGD+L +++ +GYEV+REYYINDAG QIN LALSV RY QA Sbjct: 131 SANPTGNLHLGHARGAAVGDSLCNVLEKAGYEVSREYYINDAGNQINNLALSVEARYFQA 190 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248 L D +PE Y G +K +G++LAD++ ++ E + L ++Y ++ + +R+D Sbjct: 191 L-GKDKPMPEDGYHGEDIKEIGQKLADEFGDRFVHEEESERLAFFREYGLKYELGKLRED 249 Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308 L+ + D++ SE ++ I ++ L +G++YE + Sbjct: 250 LENFRVPFDVWYSETSLYQN--GKIDQALEALREKGHIYE----------------EDGA 291 Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368 FRST GDD DR L+K DGSYTY D+AY K K +RGF +I V G+DH GY+ R++ Sbjct: 292 TWFRSTAFGDDKDRVLIKKDGSYTYLLPDIAYHKDKLDRGFQKLINVWGADHHGYIPRMK 351 Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428 A A+ K + V + +LV LY++G +KMSKR G +T+R ++DEVG D+VR+ Sbjct: 352 AAIEALGYDKETLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIDEVGLDAVRYFFAM 411 Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA--KDIFPDLDFDLFPRNVIP 486 R +DFD S ENPV+Y QYA+AR S+ RQ K I + + DL I Sbjct: 412 RSADTHMDFDLDLAVSTSNENPVYYAQYAHARICSMLRQGEEKGISFEGNLDL---TKIG 468 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 E E+D L+ + +P + +A + P+++ Y+++LASV H ++ + Sbjct: 469 SEKEYD-----LLKVIGSFPEAVADAAEKRIPHRITNYIFELASVLHSFYN------AEK 517 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + + RL L+ A +N+ L +IGV +P +M Sbjct: 518 VLDPADEEKSRARLSLMKATQITLNNALKLIGVSAPEKM 556 >gi|302344279|ref|YP_003808808.1| arginyl-tRNA synthetase [Desulfarculus baarsii DSM 2075] gi|301640892|gb|ADK86214.1| arginyl-tRNA synthetase [Desulfarculus baarsii DSM 2075] Length = 554 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 204/560 (36%), Positives = 317/560 (56%), Gaps = 43/560 (7%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDSVFIAGKGFINL 91 +E+P+ HG L+ N AM+L++P ++P +A++I+ R+ ++ IAG GFINL Sbjct: 31 AVEKPKQAEHGDLALNLAMVLAKPCRMNPRAVAQIIIERMADAGGLIERAEIAGPGFINL 90 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + P + ++ G ++GR +G G + +EFVSANPTGP+HVGH R A +GD +A Sbjct: 91 FCRPLAWLSVAPEVLAQGDDFGRCALGAGRRAQVEFVSANPTGPLHVGHGRGAALGDVMA 150 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 L+AF+G+EV EYYINDAG Q+ TL SV R +QA +D P+ +Y G Y+ + + Sbjct: 151 RLLAFAGWEVATEYYINDAGNQMATLGRSVLIRARQA-RGSDEPFPDKHYRGDYIVDLAE 209 Query: 212 EL-ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD-FHRGD 269 EL A + LL P+++ + + D++ ++ I+DDL + + SE F G Sbjct: 210 ELLASPEGAGLLAMPQDQAVDLATDWAGGKILAGIKDDLAVFGVNIATYFSERSLFADGK 269 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 ++ +D LA +G +YE L FRS+ GDD DR + +S+G Sbjct: 270 ---VQAALDELAARGLLYEA----------------DGALWFRSSQFGDDKDRVVRRSNG 310 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 TYFA+D+AY K++RGFD ++ + G+DH GYV RL A A + + V+L ++V Sbjct: 311 ELTYFASDIAYHLDKFKRGFDAVVDIWGADHHGYVPRLRAAVRAAGRQPEDLTVVLVQMV 370 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 L R G P+ MS RAG+F+TLR VVDEVG+DS RF+ L R++ LDFD K++S +N Sbjct: 371 NLLRGGNPVAMSTRAGEFVTLREVVDEVGADSARFIFLTRRSDAPLDFDLDVAKQKSMDN 430 Query: 450 PVFYVQYAYARCRSIFRQA----KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 PVFYVQYA+ R S+ R+A + P DL +E+ L + ++ Sbjct: 431 PVFYVQYAHTRVCSVLRKALEAGQGQAPPQGLDL---------GRLGPAEVDLAKIIGQF 481 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 P ++ A EP+++A+YL +LAS FH +++ + ++ L+ RL L A Sbjct: 482 PEMVRGAAETLEPHRVAYYLRELASAFHSYYNE-------THILVDDAALSAARLCLARA 534 Query: 566 VASIINSGLNIIGVESPNEM 585 V ++ +GL ++GV +P M Sbjct: 535 VGQVLRNGLALLGVSAPEAM 554 >gi|218782325|ref|YP_002433643.1| arginyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01] gi|226701483|sp|B8FCL2|SYR_DESAA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|218763709|gb|ACL06175.1| Arginyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01] Length = 556 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 223/554 (40%), Positives = 325/554 (58%), Gaps = 31/554 (5%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD--VDSVFIAGKGFINL 91 +E P+ AHG STN AM++++ + P IAE IV ++ DP+ + IAG GFIN Sbjct: 32 LEEPKQEAHGDFSTNIAMVMAKVQKMAPRKIAEAIVDNLE-DPENFLVKTEIAGPGFINF 90 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 YL PS ++++ I+ G EYGR+ IG G KV +EFVSANPTGP+HVGH R A VGD LA Sbjct: 91 YLRPSLWQRVVKGILDKGDEYGRSQIGAGQKVQVEFVSANPTGPLHVGHGRGAAVGDALA 150 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +L+ G+EV REYYIND+G QI TL LS + RY + L + D P+ Y G Y+K + K Sbjct: 151 ALLDMCGFEVEREYYINDSGRQIRTLGLSTWLRYCE-LKGKEIDFPKDCYQGDYIKDLAK 209 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 + D+ ++L + EE + ++ ++ I+ DLK + HD++ SE + D + Sbjct: 210 RIQDENLADLDSMEEEDAVLWCARFAANDILDGIKQDLKDFRVVHDVWFSEQSLY--DDN 267 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 +++ +++ + G +YE K K F++ GD+ DR +++++G Sbjct: 268 SVQNALEHFEKTGDIYE--------KDGAK--------WFKTEDRGDEKDRVVVRNNGLT 311 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 TYFA+D+AY K K++RGFD +I V G+DH GYV R++A AV K V+L +LV L Sbjct: 312 TYFASDIAYHKNKFDRGFDRVIDVWGADHHGYVARMKAAVDAVGRDKDAFEVVLVKLVNL 371 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 RDG P+ M+ R G F TL VV+EVG+D+ RF+ L R LDFD K+Q+ ENPV Sbjct: 372 LRDGEPLAMTTRGGTFETLADVVNEVGADAARFIFLSRHYESPLDFDLELAKKQTNENPV 431 Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511 +YVQY +AR SI +AKD LDFD + R+ + E++L+ LA YP V+E Sbjct: 432 WYVQYVHARICSIEAKAKDFPVSLDFD-WDRDEEILKE---IEEIRLMKALARYPEVVEG 487 Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571 A EP+++ FYL +LAS FH + + + + LT RL LV V +I Sbjct: 488 AARTLEPHRIVFYLRELASAFHSFY-----HDHMVLKEDQTPVLTKARLDLVTTVRQVIR 542 Query: 572 SGLNIIGVESPNEM 585 +GL ++GV +P M Sbjct: 543 NGLALLGVSAPESM 556 >gi|284048956|ref|YP_003399295.1| arginyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731] gi|283953177|gb|ADB47980.1| arginyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731] Length = 552 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 214/558 (38%), Positives = 313/558 (56%), Gaps = 41/558 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V+ P A G +TN A+ +R P IA + + P VD V IAG GF+N Sbjct: 32 VVLTVPPQKAFGDFATNFALQAARNFHCAPRVIAAAVQEYLDC-PSVDKVEIAGPGFLNF 90 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 YL +L + L +I+ G YG G K+ IE+VSANPTGP+HVGH R A VG LA Sbjct: 91 YLKEDWLGESLRAILDKGENYGNLPPKNGEKIQIEYVSANPTGPLHVGHGRGAAVGSALA 150 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 SLM +GY+VTREYYINDAG Q++ LALSV RY + L++ PE Y G +K + Sbjct: 151 SLMKAAGYDVTREYYINDAGNQMHNLALSVNARYLE-LFDIPCQFPENGYHGEDIKVTAR 209 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 + KY + ++ PEE+ L + + + + +++DL+A N + D++ SE H D Sbjct: 210 RIKAKYGDKFIHMPEEERLEQFQTLAKEEKLAALKEDLEAFNCEFDVWFSEQSLH--DAD 267 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 I ++D L +GYVYE K K FRST GDD DR +++ +G Sbjct: 268 KIHQVVDELQEKGYVYE--------KDGAK--------WFRSTAFGDDKDRVVIRDNGVS 311 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 TYFAAD+AY + K++RGFD +I + G+DH GY+ R++A A+ +++ VL+ ++V L Sbjct: 312 TYFAADIAYHQNKFQRGFDRVINLWGADHHGYIPRVKAAMEALGYDPSRLEVLILQMVAL 371 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 YR+G +KMSKR G +TL +++EVG+D+ RF + R LDFD E S +NPV Sbjct: 372 YRNGELVKMSKRTGKSVTLNELIEEVGTDAARFFFIMRSMDSQLDFDLTLATEHSNDNPV 431 Query: 452 FYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 +YVQYA+AR SI RQ ++ + D D + + E+ LI L +Y Sbjct: 432 YYVQYAHARICSILRQMEEEKIALRKDCDLSVLKEPI----------EVDLIKKLNDYEE 481 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 +IE A + P+K+A Y+YDLA +FH ++ R V + + RL L+ AV Sbjct: 482 LIETAAAERAPHKIAHYVYDLAGLFHSFYNQCR-------VLGVDPAVQQARLALITAVG 534 Query: 568 SIINSGLNIIGVESPNEM 585 + + GL I+GV +P+ M Sbjct: 535 NTLRHGLKILGVSAPDHM 552 >gi|296331374|ref|ZP_06873846.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676361|ref|YP_003868033.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str. W23] gi|296151489|gb|EFG92366.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414605|gb|ADM39724.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str. W23] Length = 556 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 214/589 (36%), Positives = 334/589 (56%), Gaps = 43/589 (7%) Query: 6 DFSSRLKNYLKEIDCKIKV------EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 + + ++K+ LKE + K V E+ + +V+E P+D HG STN AM L+R Sbjct: 2 NIAEQMKDVLKE-EIKSAVLKAGLAEESQIPNVVLETPKDKTHGDYSTNMAMQLARIAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +V+ K ++ + IAG GFIN Y++ YL K++ S++ +G YG IG Sbjct: 61 APRQIAEELVSHFDKGKASIEKLDIAGPGFINFYMNNQYLTKLIPSVLEAGEAYGETNIG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G +V +EFVSANPTG +H+GH R A VGD+L ++++ +GY+V+REYYINDAG QIN LA Sbjct: 121 NGERVQVEFVSANPTGDLHLGHARGAAVGDSLCNVLSKAGYDVSREYYINDAGNQINNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY +AL + +PE Y G + +GK +A++Y +N E + L ++Y + Sbjct: 181 LSVEVRYFEAL-GLEKPMPEDGYRGEDIIAIGKRIAEEYGDRFVNEEESERLAFFREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + ++ +R DL+ + D++ SE ++ I ++ + +G+VYE Sbjct: 240 KYELEKLRKDLENFRVPFDVWYSETSLYQN--GKIDKALEAIREKGHVYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRST GDD DR L+K DG+YTY D+AY K K +RGFD +I V G+ Sbjct: 288 ------EDGATWFRSTTFGDDKDRVLIKKDGTYTYLLPDIAYHKDKLDRGFDKLINVWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ +K + V + +LV LY++G +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMKAAIEALGYEKGTLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD--IFPDLD 476 D+VR+ R +DFD S ENPV+Y QYA+AR S+ RQ ++ + P +D Sbjct: 402 LDAVRYFFAMRSADTHMDFDLDLAVSTSNENPVYYAQYAHARICSMLRQGEEQGLKPAVD 461 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 D + I E E+D L+ + +P + A + P+++ Y+YDLAS H + Sbjct: 462 LDF---SHIQSEKEYD-----LLKTIGSFPEAVAEAAEKRIPHRVTNYIYDLASALHSFY 513 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + N + + RL L+ A +N+ L +IGV +P +M Sbjct: 514 N------AEKVIDPENEEKSRARLALMKATQITLNNALQLIGVSAPEKM 556 >gi|15606252|ref|NP_213630.1| arginyl-tRNA synthetase [Aquifex aeolicus VF5] gi|6226192|sp|O67068|SYR_AQUAE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|2983452|gb|AAC07033.1| arginyl-tRNA synthetase [Aquifex aeolicus VF5] Length = 583 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 217/588 (36%), Positives = 332/588 (56%), Gaps = 66/588 (11%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +E+P++ AHG L++N A +L+R L P+ IA+ + + D SV A KGFIN Sbjct: 26 VEKPKEEAHGDLASNVAFLLARELKKPPVNIAQELADFLSKDETFKSV-EAVKGFINFRF 84 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 S +L++ ++SG Y + +GKG KV +E+VSANPTGP+H+GH R AVVGDTLA L Sbjct: 85 SEDFLKEEFKKFLLSGEAYFKEDLGKGLKVQLEYVSANPTGPLHLGHGRGAVVGDTLARL 144 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD--------LPEGYYPGVY 205 F Y+VTREYYINDAG Q+ L +S+++RY + D + + Y G Y Sbjct: 145 FKFFNYDVTREYYINDAGRQVYLLGISIYYRYLEKCPERDEETFKEIKEIFEKDGYRGEY 204 Query: 206 LKHVGKELADKYSSELLNFPEE----------------------KWLP-----IVKDYSV 238 +K + + L K E L PEE K+ P ++ +Y + Sbjct: 205 VKEIAERLR-KLVGESLCKPEEANLKEVREKILKEESIELYYTKKYEPKDVVDLLSNYGL 263 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 MMK IR+DL ++I D++ SE + D + +I+ L +GYVYE Sbjct: 264 DLMMKEIREDLSLMDISFDVWFSERSLY--DSGEVERLINLLKEKGYVYE---------- 311 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 L ++++ GDD DR + +SDG+YTYFA+D+AY K++RGF+ +I V G+ Sbjct: 312 ------KDGALWLKTSLFGDDKDRVVKRSDGTYTYFASDIAYHYNKFKRGFEKVINVWGA 365 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A + + + +LL ++V+L+R+G +KMSKRAG F+TLR ++DEVG Sbjct: 366 DHHGYIPRVKAALKMLEIPEDWLEILLVQMVKLFREGKEVKMSKRAGTFVTLRELLDEVG 425 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF-PDLDF 477 D+VRF+ L +++ LDFD K KE+S ENPV+YVQYA+AR IFR+ K+ + D+ Sbjct: 426 KDAVRFIFLTKRSDTPLDFDVEKAKEKSSENPVYYVQYAHARISGIFREFKERYKKDVSV 485 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 + V E E +E++LI + + + + T+ +EP+ L +YL DLA FH +++ Sbjct: 486 EELINYVQHLEEE---AEIKLIKKVLFFKDELVDITLKREPHLLTYYLIDLAGDFHHYYN 542 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H R + + RL LV + ++ GLN++GV +P M Sbjct: 543 HHR-------ILGMEENVMFSRLALVKGIKEVVRLGLNLMGVSAPERM 583 >gi|308175459|ref|YP_003922164.1| arginyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7] gi|307608323|emb|CBI44694.1| arginyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7] gi|328555439|gb|AEB25931.1| arginyl-tRNA synthetase [Bacillus amyloliquefaciens TA208] gi|328913809|gb|AEB65405.1| arginyl-tRNA synthetase [Bacillus amyloliquefaciens LL3] Length = 556 Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust. Identities = 216/589 (36%), Positives = 332/589 (56%), Gaps = 43/589 (7%) Query: 6 DFSSRLKNYLKEIDCKIKV------EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 + + ++K+ LKE + K V E+ + +++E P+D HG STN AM L+R Sbjct: 2 NIAEQMKDVLKE-EIKAAVLKAGLAEESQIPSVLLETPKDKTHGDYSTNMAMQLARIAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IVA K ++ + IAG GFIN Y++ YL K++ S++ +G YG +G Sbjct: 61 APRQIAEEIVAAFDKGKASIEKMDIAGPGFINFYMNNGYLTKLIPSVLEAGEHYGETNVG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 +G K+ +EFVSANPTG +H+GH R A VGD L S+++ +GY+V+REYYINDAG QIN LA Sbjct: 121 QGEKIQVEFVSANPTGDLHLGHARGAAVGDVLCSVLSKAGYDVSREYYINDAGNQINNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY +AL + +PE Y G + +GK+LA+ + ++ E + ++Y + Sbjct: 181 LSVEVRYFEAL-GLEKPMPEDGYRGEDIIAIGKKLAEDFGDRFVHEEESERQAFFREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + +R DL+ + D++ SE + + I ++ L +G+VYE Sbjct: 240 KYELDKLRSDLENFRVPFDVWYSETSLY--ENGKIDQALEALREKGHVYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRST GDD DR L+K DGSYTY D+AY K K +RGFD +I V G+ Sbjct: 288 ------EDGATWFRSTTFGDDKDRVLIKKDGSYTYLLPDIAYHKDKLDRGFDKLINVWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ KK + V + +LV LY++G +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMKAAIEALGYKKGTLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD--IFPDLD 476 D+VR+ R +DFD S ENPV+Y QYA+AR S+ RQ ++ + P D Sbjct: 402 LDAVRYFFAMRSADTHMDFDLDLAVSTSNENPVYYAQYAHARICSMLRQGEEQGLKPAAD 461 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 D + I E E+D L+ + +P + A + P+++ Y+YDLAS H + Sbjct: 462 LDF---SHIQSEKEYD-----LLKTIGGFPEAVAEAAEKRIPHRITNYIYDLASALHSFY 513 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + N++ + RL L+ A +N+ L +IGV +P +M Sbjct: 514 N------AEKVIDPENKEKSRARLALMKATQITLNNALQLIGVSAPEKM 556 >gi|154687847|ref|YP_001423008.1| arginyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42] gi|166232756|sp|A7Z9V1|SYR_BACA2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|154353698|gb|ABS75777.1| ArgS [Bacillus amyloliquefaciens FZB42] Length = 556 Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust. Identities = 218/589 (37%), Positives = 332/589 (56%), Gaps = 43/589 (7%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILD------RIVIERPRDCAHGHLSTNAAMILSRPLGL 59 + + ++K+ LKE + K V K L +++E P++ HG STN AM L+R Sbjct: 2 NIAEQMKDVLKE-EIKAAVLKAGLADESQIPSVLLETPKEKTHGDYSTNMAMQLARIAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IVA K ++ + IAG GFIN Y++ SYL K++ S++ +G YG IG Sbjct: 61 APRQIAEEIVASFDKGKASIEKMDIAGPGFINFYMNNSYLTKLIPSVLEAGEHYGETNIG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 +G K+ +EFVSANPTG +H+GH R A VGD L S+++ +GY+V+REYYINDAG QIN LA Sbjct: 121 QGEKIQVEFVSANPTGDLHLGHARGAAVGDALCSVLSKAGYDVSREYYINDAGNQINNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY +AL + +PE Y G + +GK+LA+ + ++ E + ++Y + Sbjct: 181 LSVEVRYFEAL-GLEKPMPEDGYRGEDIIAIGKKLAEDFGDRFVHEEESERQAFFREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + +R DL+ + D++ SE + + I ++ L +G+VYE Sbjct: 240 KYELDKLRSDLENFRVPFDVWYSETSLY--ENGKIDQALEALREKGHVYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRST GDD DR L+K DGSYTY D+AY K K +RGFD +I V G+ Sbjct: 288 ------EDGATWFRSTTFGDDKDRVLIKKDGSYTYLLPDIAYHKDKLDRGFDKLINVWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ KK + V + +LV LY++G +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMKAAIEALGYKKGTLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD--IFPDLD 476 D+VR+ R +DFD S ENPV+Y QYA+AR S+ RQ ++ + P D Sbjct: 402 LDAVRYFFAMRSADTHMDFDLDLAVSTSNENPVYYAQYAHARICSMLRQGEEQGLKPAAD 461 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 D + I E E+D L+ + +P + A + P+++ Y+YDLAS H + Sbjct: 462 LDF---SHIQSEKEYD-----LLKTIGGFPEAVAEAAEKRIPHRVTNYIYDLASALHSFY 513 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + N++ + RL L+ A +N+ L +IGV +P +M Sbjct: 514 N------AEKVIDPENKEKSRARLALMKATQITLNNALQLIGVSAPEKM 556 >gi|288572901|ref|ZP_06391258.1| arginyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568642|gb|EFC90199.1| arginyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 558 Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust. Identities = 218/596 (36%), Positives = 328/596 (55%), Gaps = 54/596 (9%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKI----LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 AD ++ L++ + E + +K++ L + +ERP+ G +TN AM + LG Sbjct: 2 ADVTTILRDLIGEALSDMARQKEVSSDLLPEVHLERPKREDQGDWATNVAMQACKLLGEK 61 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A ++V R+K D + SV +AG GFIN +L+ ++ ++SS++ SG +YGR +GKG Sbjct: 62 PRDLAAMVVDRLKDDEHIRSVEVAGPGFINFFLADRWIGNVISSVLSSGDDYGRCDLGKG 121 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KV +EFVSANPTGP+HVGH R A VGD + +++ FSG++V +EYY+NDAG Q++ L S Sbjct: 122 RKVQVEFVSANPTGPLHVGHGRGAAVGDIVGNILDFSGWKVEKEYYVNDAGLQMSNLGKS 181 Query: 181 VFWRYQQALYNND-SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 RY + L D + PE Y G Y+ + +++ D + E L+ E+ LP +D+S + Sbjct: 182 TQSRYFELLGQADKAPFPEDGYKGDYIYDLARQVIDDHGDEYLSVDLEESLPFFRDFSSK 241 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 ++ I+ DLK + D + SE + D + D ++ L ++GY YE Sbjct: 242 VILDGIKADLKRFGVTFDCWFSEKSLYEND--QVLDTVEALRKRGYSYE----------- 288 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + FRST GDD DR L +S+G TYFA+D+AY K K++RGFD I V G+D Sbjct: 289 -----EDGAIWFRSTDFGDDKDRVLFRSNGVPTYFASDVAYHKNKFDRGFDLAIDVWGAD 343 Query: 360 HSGYVKRLEAVAAAVSEK-KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 H GYV R+ A A+ + V L + V L RDG + MS R+G F+TL V+DEVG Sbjct: 344 HHGYVPRMRAAVEALGKSPDDNFAVTLIQFVNLLRDGEQVSMSTRSGQFVTLSDVIDEVG 403 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ RF + R++ LDFD K +S +NPVFYVQYA AR SI R +D Sbjct: 404 VDATRFYFVMRRSDSHLDFDLELAKRESSDNPVFYVQYANARIASITRNLRD-------- 455 Query: 479 LFPRNVIPQESEFDTS------ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 +P E D S E +LI L+ +P +E A + P+++ Y++DLA F Sbjct: 456 --KGIAMPSVDELDESLISSSEEKKLITRLSMFPEEVEKAAVEMAPHRIVNYVHDLAGDF 513 Query: 533 HGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H ++ R ENP R+ LV A ++ + L I+G+ +P M Sbjct: 514 HSFYNAHRVLDENPS-----------RPSRILLVKATHVVLTNALRILGISAPERM 558 >gi|15616370|ref|NP_244675.1| arginyl-tRNA synthetase [Bacillus halodurans C-125] gi|20139930|sp|Q9K6C1|SYR1_BACHD RecName: Full=Arginyl-tRNA synthetase 1; AltName: Full=Arginine--tRNA ligase 1; Short=ArgRS 1 gi|10176433|dbj|BAB07527.1| arginyl-tRNA synthetase [Bacillus halodurans C-125] Length = 556 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 204/557 (36%), Positives = 323/557 (57%), Gaps = 36/557 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFIN 90 +++E P++ AHG +TN AM L+R P IAE + A++ + ++ + IAG GFIN Sbjct: 33 VILETPKEKAHGDFATNMAMQLARVAKKAPRLIAEELTAKLDRKRAAIEKIEIAGPGFIN 92 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +L SYLR+++ +++ + YG +GKG KV +EFVSANPTG +H+GH R A VGD L Sbjct: 93 FFLDNSYLREMIPTVLRAESAYGETNVGKGKKVQVEFVSANPTGNLHLGHARGAAVGDAL 152 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +++A +GY+V+REYYINDAG QIN LALS+ RY QAL + D+PE Y G + G Sbjct: 153 CNILAKAGYDVSREYYINDAGNQINNLALSLEARYFQAL-GMEKDMPEDGYHGEDIIQFG 211 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K+LA+ + + ++ E+ L ++Y ++ ++ I+ DL+ + D + SE + Sbjct: 212 KDLAETHGDKFVHESSEERLAFFREYGLKRELEKIKSDLEEFRVPFDNWYSETSLYT--T 269 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + ++ L +G YE L FRST GDD DR L+K+DGS Sbjct: 270 GKVEKTLNVLKEKGKTYE----------------QDGALWFRSTEYGDDKDRVLVKNDGS 313 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTY D++Y + K+ RGF+ +I + G+DH GY+ R++A A+ +K Q++V + ++V Sbjct: 314 YTYLTPDISYHEDKFLRGFEKLINIWGADHHGYIPRMKAAIQALGYEKDQLDVQIIQMVS 373 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L+++G +KMSKR G +TLR +++EVG D+ R+ R LDFD +S ENP Sbjct: 374 LFQNGEKVKMSKRTGKAVTLRDLMEEVGIDATRYFFAMRSADSHLDFDMDLAVSKSNENP 433 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLD--FDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 V+YVQYA+AR S+ R+ K++ D DL P I E E+D L+ + E+P V Sbjct: 434 VYYVQYAHARVCSMLRKGKELGLSFDESTDLSP---IASEKEYD-----LLKKIGEFPEV 485 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 + A Q P+++ Y+++LAS H ++ + + N + + RL L+ A Sbjct: 486 VAEAAQKQMPHRITNYVHELASTLHSFYNAE------QVINPENDEQSKARLALMKATQV 539 Query: 569 IINSGLNIIGVESPNEM 585 + + L+++GVE+P M Sbjct: 540 TLKNALSLVGVEAPERM 556 >gi|269792262|ref|YP_003317166.1| arginyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099897|gb|ACZ18884.1| arginyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589] Length = 559 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 206/562 (36%), Positives = 318/562 (56%), Gaps = 42/562 (7%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 +I +ERP+ G + +AAM L + G++P +A+ I A+I DP V++V +AG GFIN Sbjct: 33 KIYLERPKREGQGDWACSAAMQLCKSFGVNPRELADEISAKIAEDPSVETVEVAGPGFIN 92 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + LS ++ ++ ++ +G +YGR G G KV +EFVSANPTGP+H+GH R A VGD Sbjct: 93 ITLSKGWVGDLIRRVISAGADYGRVNDGGGKKVQVEFVSANPTGPLHMGHGRGAAVGDIT 152 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND-SDLPEGYYPGVYLKHV 209 AS+++++G+ V REYYINDAG Q+ L S RY + + D + PE Y G Y+ + Sbjct: 153 ASILSYAGWNVEREYYINDAGLQMEMLGRSARSRYFELIGRGDEAPFPEEGYHGDYMYDI 212 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 +E+ D+ L + PEE+ +P+ D + + +K I+ DL+ ++ D++ SE + GD Sbjct: 213 AREILDEKGPSLADLPEEEAVPLFTDLAYERTLKWIKRDLEDFGLKFDVWFSERSLYVGD 272 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + I+ L +GY YE + F+ST GD+ DR L++S+G Sbjct: 273 Q--VERTIEALKARGYAYEA----------------EGAIWFKSTAFGDEKDRVLIRSNG 314 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 + TYF +D+ Y K KY+RGFD +I V G+DH GY+ R+++ AA+ + VLL + V Sbjct: 315 APTYFMSDVVYHKNKYDRGFDLVIDVWGADHHGYIPRMKSAVAAMGRDPEDLQVLLIQFV 374 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 L R+G P+ MSKRAG F+TLR V+DEVG D+ RF + R+ LDFD K S +N Sbjct: 375 TLLRNGEPVSMSKRAGAFVTLRDVMDEVGVDATRFFFVMRRCDSHLDFDLELAKRASSDN 434 Query: 450 PVFYVQYAYARCRSIFRQA------KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503 PV+YVQYA+AR SI R++ + DLD L +P+ EL+L +A Sbjct: 435 PVYYVQYAHARMCSIERESDARGLERPSMDDLDPSLLS---LPE-------ELRLATVIA 484 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 ++P I A P+++A+Y +L+ FH ++ R + + R+ L+ Sbjct: 485 KFPEEIRKAARDMAPHRIAYYAQELSEAFHSFYNVAR-------IIGEEEPVRRNRMLLM 537 Query: 564 HAVASIINSGLNIIGVESPNEM 585 A + + L I+GV +P M Sbjct: 538 EAARIALRNALGILGVSAPERM 559 >gi|228955613|ref|ZP_04117611.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229072831|ref|ZP_04206030.1| Arginyl-tRNA synthetase [Bacillus cereus F65185] gi|229082576|ref|ZP_04215039.1| Arginyl-tRNA synthetase [Bacillus cereus Rock4-2] gi|228701008|gb|EEL53531.1| Arginyl-tRNA synthetase [Bacillus cereus Rock4-2] gi|228710322|gb|EEL62297.1| Arginyl-tRNA synthetase [Bacillus cereus F65185] gi|228803982|gb|EEM50603.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 556 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 206/569 (36%), Positives = 330/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV +EFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV RY QAL D ++ Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLDKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E++ ++Y ++ + ++ DL++ ++ Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKEREEIFE----------------EDGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ +D D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLAVDGDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|23100470|ref|NP_693937.1| arginyl-tRNA synthetase [Oceanobacillus iheyensis HTE831] gi|38372527|sp|Q8EM45|SYR_OCEIH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|22778703|dbj|BAC14971.1| arginine-tRNA ligase [Oceanobacillus iheyensis HTE831] Length = 556 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 211/575 (36%), Positives = 318/575 (55%), Gaps = 45/575 (7%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 I ++ E ++ D I++E+P+D AHG +TN AM L+R P IA+ I +++ K + Sbjct: 20 IHAELATEDQVPD-IILEKPKDKAHGDFATNIAMQLARVAKKAPRQIADDIASKLNKSEA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 V+ V IAG GFIN ++ +L +++ +++ +G YG++ G G KV +EFVS NPTG + Sbjct: 79 SVEKVEIAGPGFINFFMKQDFLGEVIDTVLSAGDNYGKSTGGNGEKVQVEFVSVNPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A GD L ++ A +GYEV REYYINDAG QIN L LSV RY Q + D D+ Sbjct: 139 HLGHARNAAFGDVLCNVFAAAGYEVEREYYINDAGNQINNLGLSVEARYLQEI-GQDVDM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + + KEL K + + E+ L K+Y ++A ++ I DLK ++ Sbjct: 198 PEDGYQGQAIIEIAKELVKKDGEKWADKDHEERLDFFKEYGLKASLRNIESDLKDFRVEF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D + SE + I D + L GY +E L F++T Sbjct: 258 DHWFSERSLFK--DGQIDDTLAVLDDGGYTFE----------------KDGALWFKTTEF 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD DR L+K DG+YTY D+AY K K +RGFD +I V GSDH GY+ R+ A A+ Sbjct: 300 GDDKDRVLIKGDGNYTYLTPDIAYHKNKLDRGFDRIINVWGSDHHGYIPRMRAALQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 + +V + ++V L+ G +KMSKR G ++LR ++DEVG D+VR+ + R N LD Sbjct: 360 PVEKFDVKIIQMVNLFEAGEKVKMSKRTGKAVSLRELMDEVGIDAVRYYFVARSNDSQLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS-- 494 FD K QS +NPV+Y QYA+AR ++ QAK E+EFD S Sbjct: 420 FDMDLAKSQSNDNPVYYAQYAHARICTMLSQAK------------SKGFNTEAEFDASLL 467 Query: 495 ----ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550 EL L+ + E P++I +A P+K+ Y+++LA++ H ++ + + A Sbjct: 468 TAEKELDLLKKIGELPQMIVDAADKHTPHKVTQYIFELATLLHSFYN------AEKVLDA 521 Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +N T R+ L+ AV + + + IIG+ +P +M Sbjct: 522 DNEARTHARIALMKAVRQTLANAMTIIGISAPEKM 556 >gi|228924110|ref|ZP_04087386.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835600|gb|EEM80965.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 556 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 206/569 (36%), Positives = 329/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV +EFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV RY QAL D ++ Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLDKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E++ ++Y ++ + ++ DL++ ++ Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKEREEIFE----------------EDGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLAADGDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|311070252|ref|YP_003975175.1| arginyl-tRNA synthetase [Bacillus atrophaeus 1942] gi|310870769|gb|ADP34244.1| arginyl-tRNA synthetase [Bacillus atrophaeus 1942] Length = 556 Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust. Identities = 212/589 (35%), Positives = 332/589 (56%), Gaps = 43/589 (7%) Query: 6 DFSSRLKNYLKEIDCKIKV------EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 + + ++K+ LKE + K V E+ + +++E P+D HG STN AM L+R Sbjct: 2 NIAEQMKDVLKE-EIKAAVLKAGLAEENQIPNVILETPKDKTHGDYSTNMAMQLARIAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IVA K ++ + IAG GFIN Y+ YL K++ S++ +G YG IG Sbjct: 61 APRQIAEDIVASFDKGKASIEKLDIAGPGFINFYMDNQYLTKLIPSVLEAGEAYGETNIG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G ++ +EFVSANPTG +H+GH R A VGD+L +++A +GY+V+REYYINDAG QIN LA Sbjct: 121 NGERIQVEFVSANPTGDLHLGHARGAAVGDSLCNVLAKAGYDVSREYYINDAGNQINNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY +AL + ++PE Y G + +GK LA++Y + E + ++Y + Sbjct: 181 LSVEVRYFEAL-GLEKEMPEDGYRGEDIIAIGKRLAEEYGDRFVKEEESERQKFFREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + ++ +R DL+ + +++ SE + + I ++ L +QG+VYE Sbjct: 240 KYELEKLRVDLENFRVPFNVWYSETSLY--ENGKIDKALEALRKQGHVYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRST GDD DR L+K DG+YTY D+AY K K +RGFD +I V G+ Sbjct: 288 ------EDGATWFRSTTFGDDKDRVLIKKDGTYTYLLPDIAYHKDKLDRGFDKLINVWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ +K + V + +LV LY++G +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMKAAIEALGYQKGTLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD--IFPDLD 476 D+VR+ R +DFD S +NPV+Y QYA+AR S+ RQ ++ + P D Sbjct: 402 LDAVRYFFAMRSADTHMDFDLDLAVSTSNDNPVYYAQYAHARICSMLRQGEEQGLTPAAD 461 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 D + + E E+D L+ + +P + A + P+++ Y+YDLA+ H + Sbjct: 462 LDF---SAVNSEKEYD-----LLKTIGGFPEAVAEAAEKRIPHRVTNYIYDLAASLHSFY 513 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + N + + RL L+ A +N+ L +IGV +P +M Sbjct: 514 NAE------KVIDPENEEKSRARLALMKATQITLNNALQLIGVSAPEKM 556 >gi|94986673|ref|YP_594606.1| arginyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00] gi|123082175|sp|Q1MRU1|SYR_LAWIP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|94730922|emb|CAJ54285.1| Arginyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00] Length = 550 Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust. Identities = 214/579 (36%), Positives = 325/579 (56%), Gaps = 33/579 (5%) Query: 10 RLKNYLKE-IDCKIK-VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 R + YLK ++C IK + + VIE P++ HG L+TN A++L+ +G++P IAE Sbjct: 2 RAEQYLKTCLECTIKKLGYTWPKKAVIEIPQNTLHGDLATNIALVLANNIGINPKNIAEK 61 Query: 68 IVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 I +++ + SV +AG GF+N+ SP++ +K ++ I+ G YG +G KV IE Sbjct: 62 IAEKLQQESTSFSSVSVAGPGFLNITFSPTFWQKTINHILSKGSSYGSCQLGNKQKVLIE 121 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 +VSANPTGP+H+GH R A +GDTLA L+ F+GY VT EYYINDAG Q+ L LS++ R + Sbjct: 122 YVSANPTGPLHIGHGRGAAIGDTLARLLRFTGYNVTTEYYINDAGRQMQLLGLSIWLRIK 181 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 + L PE YY G Y+ + K L ++ +++++ + + + ++ I+ Sbjct: 182 E-LSGIQVTWPEEYYKGTYIIEIAKALLEE-QPDIISYTDIDGEQASFHFGMNVILNGIK 239 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 DLK ++H+ + SE + + I + L G +E Sbjct: 240 QDLKTFKVEHEEWFSERTLIK--TNAIEQTLKALECTGLTFE----------------KE 281 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366 L F+ST+ GDD DR L KSD S TYFA D+AY KY RGFD +I ++G+DH GY+ R Sbjct: 282 GALWFQSTVFGDDKDRVLRKSDKSLTYFALDIAYHYTKYNRGFDRIIDILGADHHGYIAR 341 Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 ++A A +++L +LV L +G+ + MS RAG F L V++EVG D+ RFM Sbjct: 342 IKAAMQAFGHDPMTFDIILIQLVSLLENGIQVAMSTRAGQFEKLIDVINEVGVDAARFMF 401 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 L RK+ LDFD VK+++ NPV+YVQYAYAR SI R+A DL F + N +P Sbjct: 402 LLRKSDAHLDFDLELVKQRTMNNPVYYVQYAYARICSIIRKAH----DLGFTITDVNEVP 457 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 + EL L+ L ++ VI NA P+ + YL +LA H +++ + Sbjct: 458 LSNITTKDELNLLRLLDKFEDVIYNAAQHLAPHYITHYLMELAGELHSYYA------KYP 511 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +Q+N + + + RL L+ AV +I + LNI+GV +P M Sbjct: 512 VLQSNEKTIVLSRLALLQAVGQVIYNALNILGVTAPKNM 550 >gi|78357338|ref|YP_388787.1| arginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|109894988|sp|Q30Z04|SYR_DESDG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|78219743|gb|ABB39092.1| arginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 551 Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust. Identities = 216/588 (36%), Positives = 331/588 (56%), Gaps = 50/588 (8%) Query: 10 RLKNYLKEIDCKI--KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 R KN+L+ + +E D++ IE P+D G L+ N A++L++P + P +A Sbjct: 2 RAKNHLQTALKAVVADLELPWPDKVSIEPPKDKKFGDLAANIALVLAKPAAMPPRELAAR 61 Query: 68 IVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 I R++ P++ V IAG GFIN+ +P + + + + +G +G +G G KV IE Sbjct: 62 ITERLQQKYPEISGVEIAGPGFINVTYAPDFWHRTVHMVEQAGGRFGSVNVGNGRKVQIE 121 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 +VSANPTGP+H+GH R A +GD+LA +M F+G+E + EYYINDAG Q+ L SV++R + Sbjct: 122 YVSANPTGPLHIGHGRGAAIGDSLARMMRFAGFETSTEYYINDAGRQMLLLGASVYYRAK 181 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 Q + D PE YY G Y++ + E+ ++ +LL PEE+ L + + Y+V +M IR Sbjct: 182 Q-IKGLDVAEPEEYYRGDYIRDIASEVL-GFTPDLLEKPEEEALAVCQKYAVDTIMAGIR 239 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 DL ++ HD++ SE + + D L R G YE + Sbjct: 240 QDLADFSVSHDVWFSEKSLV--ETGAVDKTFDRLRRSGLAYE----------------ED 281 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366 L FR+T GDD +R L KS+G TYFA+D+AY KY+RGFD + + G+DH GYV R Sbjct: 282 GALWFRTTDFGDDKNRVLKKSNGYLTYFASDIAYHDNKYDRGFDLCVDIWGADHHGYVPR 341 Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 + A A+ + +V+L +LV L R+G + MS RAG+F TL VV EVG+D+ RFM Sbjct: 342 MRAAVQALGKPADSFDVILVQLVNLLRNGEQVAMSTRAGEFETLADVVKEVGADAARFMF 401 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 L RK+ LDFD VK++S +NPV+YVQYA+AR S+ R+A + R P Sbjct: 402 LSRKSDSSLDFDLELVKQRSMDNPVYYVQYAHARICSVLRKAAE-----------RGTTP 450 Query: 487 QESEFDTSELQLIVHLAE---------YPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 E+ D L+ +VH E + +E A + + +++YL +LAS H ++ Sbjct: 451 -ETHSDEELLKPLVHADEIDMLRLVDRFEDTVEAAATSLSVHHISYYLQELASALHRFYA 509 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +P L A + ++ RL L+ AVA ++ +GL+++GV +P M Sbjct: 510 N---HPVL---NAPDEQILKARLALLRAVAQVLRNGLDLLGVSAPEAM 551 >gi|118480395|ref|YP_897546.1| arginyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] gi|118419620|gb|ABK88039.1| arginyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] Length = 556 Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust. Identities = 205/569 (36%), Positives = 329/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV +EFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV RY QAL + ++ Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVKARYMQAL-GLEKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E++ ++Y ++ + ++ DL++ ++ Sbjct: 198 PEDGYHGADIIAIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATDGDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAAALHSFYNAE------KVLNQDNVELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|224541964|ref|ZP_03682503.1| hypothetical protein CATMIT_01137 [Catenibacterium mitsuokai DSM 15897] gi|224525104|gb|EEF94209.1| hypothetical protein CATMIT_01137 [Catenibacterium mitsuokai DSM 15897] Length = 568 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 204/559 (36%), Positives = 313/559 (55%), Gaps = 38/559 (6%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGF 88 + I+IE P+D HG STN AM L+R L +P IA IV + + V+ V IAG GF Sbjct: 45 ENIMIEIPKDSTHGDYSTNIAMQLTRTLHKNPREIATAIVDSLDQEAAHVEKVEIAGPGF 104 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 IN ++ L +++ ++ YG+ G+G K N+EFVSANPTG +H+GH + A VGD Sbjct: 105 INFFMKNDALTSVIAEVLSEKDNYGQTHFGEGKKYNVEFVSANPTGDLHLGHAKGAAVGD 164 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 ++ +M +GY+VTREYYINDAG QI LALS++ RY AL++ + +PE Y G + Sbjct: 165 SICRIMTKAGYDVTREYYINDAGKQITNLALSLYSRYL-ALFDIERPIPEDGYMGQDVID 223 Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 + K + +K L EE+ + + + ++ I+D LK + D++ SE + G Sbjct: 224 IAKSIKEKEGDALTQLTEEEAIAYFRKVGTEHELQKIKDILKEFRVSFDVWFSETSLYEG 283 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 + I I+ L +GY YE L FR+T GDD DR L+K+D Sbjct: 284 NK--IEPAINKLKEKGYTYE----------------QDGALWFRTTDFGDDKDRVLIKTD 325 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 GSYTYF D+AY K RG+D ++ ++G+DH GY+ R++A A+ Q+N+ + ++ Sbjct: 326 GSYTYFTPDIAYHLSKLNRGYDYLVDLLGADHHGYINRMKAAIQALGYNADQLNIDILQM 385 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 VR+ +G +KMSKR G+ +T+R ++D++G D+ R+ + + + DFD K QS E Sbjct: 386 VRMVENGEVVKMSKRTGNAVTIRDLIDDIGVDATRYFFVAKAANTPFDFDLGLAKSQSNE 445 Query: 449 NPVFYVQYAYARCRSIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 NPV+Y QYA+AR SI R A K+I P F+L + E++L+ H+ E+ Sbjct: 446 NPVYYAQYAHARMCSIMRSAAEKNIEPADHFELIN----------NPKEIELLKHINEFK 495 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 I +A + P+K+A Y+ LA +FH + + N++L+ RL LV A Sbjct: 496 NTINDAARTRAPHKIANYIQRLAQLFHSFYGD------CHVIDEENKELSSQRLALVEAT 549 Query: 567 ASIINSGLNIIGVESPNEM 585 I + LN+IGV +P +M Sbjct: 550 RITIANALNLIGVHAPEKM 568 >gi|282857140|ref|ZP_06266386.1| arginine--tRNA ligase [Pyramidobacter piscolens W5455] gi|282585075|gb|EFB90397.1| arginine--tRNA ligase [Pyramidobacter piscolens W5455] Length = 559 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 208/564 (36%), Positives = 312/564 (55%), Gaps = 41/564 (7%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 L + ERP+ HG +TNAAM RPLG P +AE I RI D + V +AG GF Sbjct: 30 LGELHFERPKQENHGDWATNAAMQNCRPLGCKPRDLAEDIARRIGSDRRIRRVEVAGPGF 89 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 IN YLS ++ I+ ++ +G +YGR +GKG K +EFVSANPTGP+HVGH R A VGD Sbjct: 90 INFYLSNLWMGDIVRDVLAAGSDYGRVDLGKGRKAQVEFVSANPTGPLHVGHGRGAAVGD 149 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLK 207 ++++F+G+ V +EYY+NDAG Q+N L S RY + L + PE Y G Y+ Sbjct: 150 VTGNILSFAGWNVEKEYYVNDAGLQMNILGRSTQSRYFELLGRPEKFPFPEESYKGRYIY 209 Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 + +E+ D E L P E+ LP + Y+ +++ I+++L + D F SE + Sbjct: 210 DIAQEVVDARGEEFLERPLEESLPFFRTYAAGRILEQIKNELGEFGVTFDNFFSEKSLY- 268 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 D + + L +G++YE + L FRST GDD DR L++S Sbjct: 269 -DRDLVAAAVQTLKERGHLYE----------------QDEALWFRSTEYGDDKDRVLMRS 311 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387 +G TYF +D+AY K K++RGF+ +I V G+DH GYV R++A A+ + +LL + Sbjct: 312 NGVPTYFTSDIAYHKEKFDRGFERVIDVWGADHHGYVPRMKAAIEALGYDPKKFTILLIQ 371 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 V L RDG +KMS R+G F+ L+ VV EVG D+ R+ L R++ LDFD K QS Sbjct: 372 FVNLLRDGEQVKMSTRSGQFVELQEVVREVGVDAARYYFLMRRSDSHLDFDLELAKSQSA 431 Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD------TSELQLIVH 501 +NPV+YVQYA+AR SI ++A + +P S FD E +L Sbjct: 432 DNPVYYVQYAHARLCSILQKAAE----------KGIAVPGVSAFDPDVIATPEEKRLFTK 481 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 LA++P + A EP+++ Y+Y+LA FH ++++G + + L L Sbjct: 482 LAQFPEEVGRAAADLEPHRIVSYVYELAGDFHSYYNNGGR------ILEESGALRDSHLL 535 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 +V A+ ++I + L ++G+ +P +M Sbjct: 536 MVAAIRTVIANALRLLGISAPEKM 559 >gi|308272771|emb|CBX29375.1| Arginyl-tRNA synthetase [uncultured Desulfobacterium sp.] Length = 554 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 201/555 (36%), Positives = 336/555 (60%), Gaps = 35/555 (6%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDSVFIAGKGFINLY 92 IE P+ AHG S+N AM+++ + P IAE I A I+ + +D + IAG GFIN + Sbjct: 32 IEEPKLSAHGDFSSNFAMVMASLQKMPPRKIAEAITAEIEDTEGVIDKIEIAGPGFINFF 91 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 ++P +L +I ++G IGK KV +EFVSANPTGP+HVGH R A VGD+ A+ Sbjct: 92 INPCAWHSVLRTIYEKDEKFGSCDIGKNRKVQVEFVSANPTGPLHVGHGRGAAVGDSTAN 151 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 +++F GY+V REYYIND+G QI+TL SV+ RY++ L+ + P Y G Y++ + ++ Sbjct: 152 ILSFCGYDVQREYYINDSGRQISTLGRSVYLRYKE-LHEEKINFPGDCYQGDYIRDIAQK 210 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 + ++ +LL+ PEEK + ++ ++ I++DL+ ++ D + SE D Sbjct: 211 IKNENQIDLLDEPEEKAVMFCARFAADDILADIKNDLELFGVKFDNWYSEQSLF--DSGK 268 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 ++ ++++ + +YE F+++ GD+ DR +++++G T Sbjct: 269 VKSVLEDFKNKNIIYE----------------KDGAFWFKTSEYGDEKDRVVIRNNGLTT 312 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 YFA+D+AY K++RGF+ ++ V G+DH GY++R+ A A +K+ Q NV+L +LV L Sbjct: 313 YFASDIAYHIDKFDRGFERIVDVWGADHHGYIQRICASIEASGQKEDQFNVILIQLVNLL 372 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 R+G P+ MS R+G+F+TL VV EVG+D+ RF+ L R LDFD K++S ENPV+ Sbjct: 373 RNGEPVAMSTRSGEFVTLEDVVKEVGADAARFIFLTRHYESHLDFDLELAKKKSNENPVY 432 Query: 453 YVQYAYARCRSIFRQAKDI-FPDLDFDLFPRNV-IPQESEFDTSELQLIVHLAEYPRVIE 510 YVQY +AR SI R+A ++ ++ +D +N+ + +E+E E+Q++ L+ YP V++ Sbjct: 433 YVQYVHARISSIIRKADELGVKEIRYD--DKNITVLKEAE----EIQILKILSTYPEVVK 486 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 ++ EP+++ +YL +LA+ FH +++ R V +++ +T RL LV A+ +I Sbjct: 487 SSAELLEPHRITYYLMNLAAAFHSYYNKCR-------VLSDDPVITKNRLFLVLAIKKVI 539 Query: 571 NSGLNIIGVESPNEM 585 +GL ++GV +P M Sbjct: 540 RNGLKLLGVSAPEIM 554 >gi|77918356|ref|YP_356171.1| arginyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380] gi|109895013|sp|Q3A6K6|SYR_PELCD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|77544439|gb|ABA88001.1| arginyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380] Length = 554 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 226/588 (38%), Positives = 325/588 (55%), Gaps = 47/588 (7%) Query: 9 SRLKNYLKEI--DC--KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 RL+ Y+ E C + ++ + I +E P HG STN AM ++R P I Sbjct: 3 QRLRQYIGEALQACFDQQQLHSGTIPEINLEVPAHAEHGDFSTNVAMAMARAEKKAPRKI 62 Query: 65 AELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 AE IVA + + S V IAG GFIN YL+P +L +V G +GR G G KV Sbjct: 63 AETIVAALGEGGGMWSRVEIAGPGFINFYLTPRCWFGVLDEVVRRGDLFGRTHTGNGRKV 122 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EFVSANPTGP+H+GH R A GD +A+++ +GYEV REYYINDAG Q+ TL S+ Sbjct: 123 QVEFVSANPTGPLHIGHGRGAATGDAVAAVLGAAGYEVQREYYINDAGNQMLTLGRSLLL 182 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 RY++ L + P Y GVY+ + +E+ + L + PEE+ L +Y + Sbjct: 183 RYRE-LLGETIEFPTDCYQGVYVIDLAREVLESEGERLRDLPEEEALRFFANYGGDKIRA 241 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I +DL A ++ D + SE + D + I L +G YE Sbjct: 242 GIDEDLAAFGVRFDNWYSEQSLY--DRQEVERGIALLKERGLTYE--------------- 284 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 + FR+T GDD DR L++S+G+ TYFA+D+AY K K+ERGFD +I V G+DH GY Sbjct: 285 -KDGAIWFRTTDYGDDKDRVLIRSNGATTYFASDVAYHKEKFERGFDTVIDVWGADHHGY 343 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 V R++AV A + + ++L +LV L R G + MS R+G+F+TLR V+DEVG D+ R Sbjct: 344 VPRMKAVLAGLDRNPEDLQIILVQLVNLLRGGQQVAMSTRSGEFVTLREVIDEVGRDACR 403 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDL---DF 477 F L R++ LDFD K+QS ENPV+YVQYA+AR SI R A+D P+L DF Sbjct: 404 FFFLMRRSDSQLDFDLDLAKKQSTENPVYYVQYAHARVCSINRNAEDQGVAMPELGEVDF 463 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 D EL L L+ YP V++ A EP+++ FYL +LA+ FH +++ Sbjct: 464 DCLTLE----------DELALTKLLSRYPEVVDGAAEHFEPHRVVFYLQELAARFHSYYN 513 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 GR V ++ ++ RL LV+ V +++++ L ++GV +P M Sbjct: 514 KGR-------VLVDDPDVSRARLYLVNCVRTVLHNALVLLGVSAPERM 554 >gi|229193615|ref|ZP_04320559.1| Arginyl-tRNA synthetase [Bacillus cereus ATCC 10876] gi|228589920|gb|EEK47795.1| Arginyl-tRNA synthetase [Bacillus cereus ATCC 10876] Length = 556 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 205/569 (36%), Positives = 328/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV +EFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV RY QAL D ++ Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLDKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E++ ++Y ++ + ++ DL++ ++ Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKEREEIFE----------------EDGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|149182460|ref|ZP_01860935.1| arginyl-tRNA synthetase [Bacillus sp. SG-1] gi|148849853|gb|EDL64028.1| arginyl-tRNA synthetase [Bacillus sp. SG-1] Length = 556 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 204/559 (36%), Positives = 325/559 (58%), Gaps = 40/559 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFIN 90 +++E P++ +HG STN AM L+R P IA+ I A I K ++ + IAG GFIN Sbjct: 33 VILETPKEKSHGDYSTNMAMQLARVAKKAPRMIADDIAANIDKEAASIEKIDIAGPGFIN 92 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 ++ YL +++++I+ +G EYGR+ GKG ++N+EFVSANPTG +H+GH R A VGD+L Sbjct: 93 FFMRNEYLTELVANILEAGDEYGRSDAGKGERINVEFVSANPTGDLHLGHARGASVGDSL 152 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +++ +GY+VTREYYINDAG QI+ LALSV RY QAL +D +PE Y G + +G Sbjct: 153 CNVLDKAGYKVTREYYINDAGNQIHNLALSVEARYFQAL-GHDKAVPEDGYQGADIIGIG 211 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 ++LAD++ + + EE+ ++Y ++ M+ ++ DL+ + +++ SE + + Sbjct: 212 QKLADEFGDKYIEASEEERYKFFREYGLKFEMEKLKKDLEDFRVPFNVWYSETSLY--EN 269 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I D + L ++YE + FRST +GDD DR L+K+DG+ Sbjct: 270 GKIDDALKALKDNNHIYE----------------EDGATWFRSTELGDDKDRVLIKNDGT 313 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTY D++Y + K+ERG D +I + G+DH GY+ R++A A+ + ++ V + +LV Sbjct: 314 YTYLTPDISYHRDKFERGHDILINIWGADHHGYIPRMKAAIEALGYDREKLEVEVIQLVH 373 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L+++G +KMSKR G +T+R +V+EVG D+VR+ R +DFD QS ENP Sbjct: 374 LFKNGEKMKMSKRTGKAVTMRDLVEEVGLDAVRYFFAMRSADTHMDFDLDLAVSQSNENP 433 Query: 451 VFYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 V+Y QYA+AR SI RQA + D+ L ++L+ L ++P Sbjct: 434 VYYAQYAHARICSILRQAAEQGINFEEGTDYSLLKAE----------KTIELLKKLGDFP 483 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 V+ +A + P+++A Y+ +LAS FH ++ + + N +LT RL L+ AV Sbjct: 484 GVVADAAAKRTPHRVANYINELASTFHSFYN------AEKVLDMENMELTKARLSLIKAV 537 Query: 567 ASIINSGLNIIGVESPNEM 585 + + L +IGV +P +M Sbjct: 538 RLTMKNALKLIGVSAPEKM 556 >gi|75758530|ref|ZP_00738650.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218900490|ref|YP_002448901.1| arginyl-tRNA synthetase [Bacillus cereus G9842] gi|228903841|ref|ZP_04067956.1| Arginyl-tRNA synthetase [Bacillus thuringiensis IBL 4222] gi|228968494|ref|ZP_04129482.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. T04001] gi|74493964|gb|EAO57060.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218544147|gb|ACK96541.1| arginyl-tRNA synthetase [Bacillus cereus G9842] gi|228791200|gb|EEM38814.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. T04001] gi|228855750|gb|EEN00295.1| Arginyl-tRNA synthetase [Bacillus thuringiensis IBL 4222] Length = 556 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 205/569 (36%), Positives = 327/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV +EFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LALSV RY QAL D ++ Sbjct: 139 HLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLDKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E+ + Y ++ + ++ DL++ ++ Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGLKYELAKLQKDLESFRVKF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDAALTVLKERDEIFE----------------EGGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLAADGDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|206970067|ref|ZP_03231020.1| arginyl-tRNA synthetase [Bacillus cereus AH1134] gi|229181611|ref|ZP_04308936.1| Arginyl-tRNA synthetase [Bacillus cereus 172560W] gi|206734644|gb|EDZ51813.1| arginyl-tRNA synthetase [Bacillus cereus AH1134] gi|228601807|gb|EEK59303.1| Arginyl-tRNA synthetase [Bacillus cereus 172560W] Length = 556 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 205/569 (36%), Positives = 328/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV +EFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV RY QAL D ++ Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLDKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E++ ++Y ++ + ++ DL++ ++ Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKEREEIFE----------------EDGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNAE------KVLNQDNVELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|228936649|ref|ZP_04099442.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228822988|gb|EEM68827.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 556 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 205/569 (36%), Positives = 328/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV IEFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQIEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV RY QAL + ++ Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E++ ++Y ++ + ++ DL++ ++ Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|228942510|ref|ZP_04105045.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975443|ref|ZP_04135998.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228982076|ref|ZP_04142368.1| Arginyl-tRNA synthetase [Bacillus thuringiensis Bt407] gi|228777614|gb|EEM25889.1| Arginyl-tRNA synthetase [Bacillus thuringiensis Bt407] gi|228784237|gb|EEM32261.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817103|gb|EEM63193.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326943161|gb|AEA19057.1| arginyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis CT-43] Length = 556 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 204/569 (35%), Positives = 329/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV +EFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LALSV RY QAL + ++ Sbjct: 139 HLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E++ ++Y ++ + ++ DL++ ++ Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDAALAVLKERDEIFE----------------EGGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLAADGDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|228911203|ref|ZP_04075008.1| Arginyl-tRNA synthetase [Bacillus thuringiensis IBL 200] gi|228848379|gb|EEM93228.1| Arginyl-tRNA synthetase [Bacillus thuringiensis IBL 200] Length = 556 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 205/569 (36%), Positives = 327/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV +EFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LALSV RY QAL D ++ Sbjct: 139 HLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLDKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E+ + Y ++ + ++ DL++ ++ Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGLKYELAKLQKDLESFRVKF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDAALAVLKERDEIFE----------------EGGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLAADGDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|42784538|ref|NP_981785.1| arginyl-tRNA synthetase [Bacillus cereus ATCC 10987] gi|81408378|sp|Q72X85|SYR_BACC1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|42740470|gb|AAS44393.1| arginyl-tRNA synthetase [Bacillus cereus ATCC 10987] Length = 556 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 204/569 (35%), Positives = 328/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV +EFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETSTGKGEKVQVEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV RY QAL + ++ Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E++ ++Y ++ + ++ DL++ ++ Sbjct: 198 PEDGYHGADIIAIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAAALHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|49481250|ref|YP_039355.1| arginyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|81394157|sp|Q6HAS1|SYR2_BACHK RecName: Full=Arginyl-tRNA synthetase 2; AltName: Full=Arginine--tRNA ligase 2; Short=ArgRS 2 gi|49332806|gb|AAT63452.1| arginine--tRNA ligase (arginyl-tRNA synthetase) [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 556 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 204/569 (35%), Positives = 328/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV +EFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV RY QAL + ++ Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E++ ++Y ++ + ++ DL++ ++ Sbjct: 198 PEDGYHGADIIGIGKSLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|206975865|ref|ZP_03236776.1| arginyl-tRNA synthetase [Bacillus cereus H3081.97] gi|217962853|ref|YP_002341431.1| arginyl-tRNA synthetase [Bacillus cereus AH187] gi|222098835|ref|YP_002532893.1| arginyl-tRNA synthetase [Bacillus cereus Q1] gi|229142106|ref|ZP_04270631.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-ST26] gi|229199487|ref|ZP_04326148.1| Arginyl-tRNA synthetase [Bacillus cereus m1293] gi|206745959|gb|EDZ57355.1| arginyl-tRNA synthetase [Bacillus cereus H3081.97] gi|217064150|gb|ACJ78400.1| arginyl-tRNA synthetase [Bacillus cereus AH187] gi|221242894|gb|ACM15604.1| arginine--tRNA ligase (arginyl-tRNA synthetase) [Bacillus cereus Q1] gi|228583892|gb|EEK42049.1| Arginyl-tRNA synthetase [Bacillus cereus m1293] gi|228641395|gb|EEK97701.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-ST26] gi|324329312|gb|ADY24572.1| arginyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 556 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 204/569 (35%), Positives = 328/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV +EFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV RY QAL + ++ Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E++ ++Y ++ + ++ DL++ ++ Sbjct: 198 PEDGYHGADIIAIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|30023394|ref|NP_835025.1| arginyl-tRNA synthetase [Bacillus cereus ATCC 14579] gi|52140201|ref|YP_086631.1| arginyl-tRNA synthetase [Bacillus cereus E33L] gi|196040960|ref|ZP_03108257.1| arginine--tRNA ligase [Bacillus cereus NVH0597-99] gi|196045443|ref|ZP_03112674.1| arginyl-tRNA synthetase [Bacillus cereus 03BB108] gi|225867345|ref|YP_002752723.1| arginyl-tRNA synthetase [Bacillus cereus 03BB102] gi|228917976|ref|ZP_04081508.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229094476|ref|ZP_04225545.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-42] gi|229130611|ref|ZP_04259567.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-Cer4] gi|229147903|ref|ZP_04276244.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-ST24] gi|229158924|ref|ZP_04286981.1| Arginyl-tRNA synthetase [Bacillus cereus ATCC 4342] gi|229187591|ref|ZP_04314729.1| Arginyl-tRNA synthetase [Bacillus cereus BGSC 6E1] gi|254724022|ref|ZP_05185807.1| arginyl-tRNA synthetase [Bacillus anthracis str. A1055] gi|254724717|ref|ZP_05186500.1| arginyl-tRNA synthetase [Bacillus anthracis str. A1055] gi|296505786|ref|YP_003667486.1| arginyl-tRNA synthetase [Bacillus thuringiensis BMB171] gi|38372513|sp|Q814Q8|SYR_BACCR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|81685308|sp|Q630N6|SYR2_BACCZ RecName: Full=Arginyl-tRNA synthetase 2; AltName: Full=Arginine--tRNA ligase 2; Short=ArgRS 2 gi|29898955|gb|AAP12226.1| Arginyl-tRNA synthetase [Bacillus cereus ATCC 14579] gi|51973670|gb|AAU15220.1| arginine--tRNA ligase (arginyl-tRNA synthetase) [Bacillus cereus E33L] gi|196023650|gb|EDX62326.1| arginyl-tRNA synthetase [Bacillus cereus 03BB108] gi|196028128|gb|EDX66738.1| arginine--tRNA ligase [Bacillus cereus NVH0597-99] gi|225787404|gb|ACO27621.1| arginine--tRNA ligase [Bacillus cereus 03BB102] gi|228595843|gb|EEK53525.1| Arginyl-tRNA synthetase [Bacillus cereus BGSC 6E1] gi|228624535|gb|EEK81305.1| Arginyl-tRNA synthetase [Bacillus cereus ATCC 4342] gi|228635553|gb|EEK92042.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-ST24] gi|228652950|gb|EEL08832.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-Cer4] gi|228688860|gb|EEL42690.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-42] gi|228841641|gb|EEM86753.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|296326838|gb|ADH09766.1| arginyl-tRNA synthetase [Bacillus thuringiensis BMB171] Length = 556 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 204/569 (35%), Positives = 328/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV +EFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV RY QAL + ++ Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E++ ++Y ++ + ++ DL++ ++ Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|218233285|ref|YP_002370139.1| arginyl-tRNA synthetase [Bacillus cereus B4264] gi|218161242|gb|ACK61234.1| arginine--tRNA ligase [Bacillus cereus B4264] Length = 556 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 204/569 (35%), Positives = 328/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV +EFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVSAGEAYGETNTGKGEKVQVEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV RY QAL + ++ Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E++ ++Y ++ + ++ DL++ ++ Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|196036513|ref|ZP_03103908.1| arginyl-tRNA synthetase [Bacillus cereus W] gi|218906541|ref|YP_002454375.1| arginyl-tRNA synthetase [Bacillus cereus AH820] gi|228930370|ref|ZP_04093372.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229124865|ref|ZP_04254042.1| Arginyl-tRNA synthetase [Bacillus cereus 95/8201] gi|195990846|gb|EDX54819.1| arginyl-tRNA synthetase [Bacillus cereus W] gi|218538647|gb|ACK91045.1| arginyl-tRNA synthetase [Bacillus cereus AH820] gi|228658573|gb|EEL14236.1| Arginyl-tRNA synthetase [Bacillus cereus 95/8201] gi|228829293|gb|EEM74928.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 556 Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 204/569 (35%), Positives = 328/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV +EFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV RY QAL + ++ Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E++ ++Y ++ + ++ DL++ ++ Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAAALHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|300117879|ref|ZP_07055646.1| arginyl-tRNA synthetase [Bacillus cereus SJ1] gi|298724743|gb|EFI65418.1| arginyl-tRNA synthetase [Bacillus cereus SJ1] Length = 556 Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 204/569 (35%), Positives = 327/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV +EFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +L+A +GY V+REYYINDAG QI+ LALSV RY QAL + ++ Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYNVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E++ ++Y ++ + ++ DL++ ++ Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|228961626|ref|ZP_04123235.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani str. T13001] gi|229051033|ref|ZP_04194581.1| Arginyl-tRNA synthetase [Bacillus cereus AH676] gi|229112776|ref|ZP_04242308.1| Arginyl-tRNA synthetase [Bacillus cereus Rock1-15] gi|229153525|ref|ZP_04281703.1| Arginyl-tRNA synthetase [Bacillus cereus m1550] gi|228630129|gb|EEK86780.1| Arginyl-tRNA synthetase [Bacillus cereus m1550] gi|228670610|gb|EEL25922.1| Arginyl-tRNA synthetase [Bacillus cereus Rock1-15] gi|228722342|gb|EEL73739.1| Arginyl-tRNA synthetase [Bacillus cereus AH676] gi|228798108|gb|EEM45112.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 556 Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 204/569 (35%), Positives = 328/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV +EFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV RY QAL + ++ Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E++ ++Y ++ + ++ DL++ ++ Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|228949088|ref|ZP_04111358.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228810529|gb|EEM56880.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 556 Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 204/569 (35%), Positives = 328/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV +EFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV RY QAL + ++ Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E++ ++Y ++ + ++ DL++ ++ Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGRDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAAALHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|229164310|ref|ZP_04292241.1| Arginyl-tRNA synthetase [Bacillus cereus R309803] gi|228619153|gb|EEK76048.1| Arginyl-tRNA synthetase [Bacillus cereus R309803] Length = 556 Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 204/569 (35%), Positives = 328/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV +EFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV RY QAL + ++ Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E++ ++Y ++ + ++ DL++ ++ Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKIVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAAALHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|47570345|ref|ZP_00240989.1| arginyl-tRNA synthetase [Bacillus cereus G9241] gi|47552987|gb|EAL11394.1| arginyl-tRNA synthetase [Bacillus cereus G9241] Length = 556 Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 204/569 (35%), Positives = 328/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV +EFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV RY QAL + ++ Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E++ ++Y ++ + ++ DL++ ++ Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKVINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|288819194|ref|YP_003433542.1| arginyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] gi|288788594|dbj|BAI70341.1| arginyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] gi|308752776|gb|ADO46259.1| arginyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] Length = 551 Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 214/584 (36%), Positives = 331/584 (56%), Gaps = 42/584 (7%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 S +K +KEI I +E +E+P++ + G LSTN A ++++ L ++P +A+ Sbjct: 5 LESSIKETIKEI-YGINIEG-----FTVEKPKEESLGDLSTNVAFLVAKELKINPKDVAQ 58 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 + ++ + + A GFIN S ++ R+ ++ +Y IGKG V IE Sbjct: 59 ELAKKL---SNKKMLAKASGGFINFTFSENFWREEFEKLLKEREKYFVEDIGKGESVQIE 115 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+H+GH R AVVGD LA+L+ GY V REYYINDAG Q+ L LSVF RY Sbjct: 116 FVSANPTGPLHLGHGRGAVVGDVLANLLETYGYRVVREYYINDAGYQVYLLGLSVFCRYM 175 Query: 187 QALYNNDSDLPEGY----YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 + D++L + Y Y G Y+K + +++ Y LL +K + ++DY+V+ ++ Sbjct: 176 ELFGQEDAELKQVYEREGYKGSYIKKLAEDVKAFYGDALLKEERQKAIERLRDYAVKRLL 235 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 + IRDDL+ LNI+ D++ SE + + + +I+ L +GY YE Sbjct: 236 EEIRDDLELLNIKFDVWYSERSLY--EEGKVEQVINLLRERGYTYE-------------- 279 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 + L FRST GDD DR L++SDG+YTYFA+D+AY KY+RGF +I V G+DH G Sbjct: 280 --KDQALWFRSTDFGDDKDRVLIRSDGTYTYFASDVAYHWEKYKRGFARVINVWGADHHG 337 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 Y+ RL+ +A+ + ++V ++VRL+ G ++MSKR G+F+TLR +V+EVGSD+V Sbjct: 338 YLPRLKGALSALGVPQNWLHVQFVQMVRLFSAGQEVRMSKRTGEFVTLRELVEEVGSDAV 397 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP-DLDFDLFP 481 RF L +++ LDFD +K++S ENPVFYVQY +AR R +FR+ F D D + Sbjct: 398 RFTFLTKRSDTPLDFDIDLLKKKSSENPVFYVQYMHARIRGVFREVLSRFGIDADKEELN 457 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + V E EL+L+ I+ A + P+ + + L DLA FH +++H R Sbjct: 458 KFVYNLREE---QELKLVKKAVSLKDSIKEAALRWLPHIITYELIDLAKDFHNYYNHYR- 513 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V +R++ + RL L + + + L ++ V +P M Sbjct: 514 ------VIVEDREVMLSRLALFKGIETSVKFALKLMKVSAPERM 551 >gi|327441472|dbj|BAK17837.1| arginyl-tRNA synthetase [Solibacillus silvestris StLB046] Length = 555 Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 200/569 (35%), Positives = 330/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-P 76 ID VE I +E P+D A+G +TN AM L++ P IAE I+A + + Sbjct: 19 IDQAGLVEAGTEINIHLETPKDKANGDFATNIAMQLTKLAKKPPRAIAEAILAHLTTEGT 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 D++ + IAG GF+N+ + +L ++++ G YGR+ G G KV +EFVSANPTG + Sbjct: 79 DIEKIEIAGPGFMNITVRKDFLASVVTATFEQGENYGRSTAGAGEKVQVEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGD+L +++ F+G++V+REYYINDAG QIN LA S+ RY+QAL ++++ Sbjct: 139 HLGHARGASVGDSLCNVLDFAGFDVSREYYINDAGNQINNLAYSLEARYKQAL-GMEAEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + + +LA++Y + +L+ +E+ +++ ++ + +++DLK ++ Sbjct: 198 PEDGYHGPDIIGIAGKLAEEYGATILDKSDEERFKFFREHGLKLELAKLQNDLKNFRVEF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE + + I +D L G+V++ + FRST Sbjct: 258 DVWYSETSLY--ENGKIDVALDKLKANGHVFD----------------EDGATWFRSTTF 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD DR L+K+DGSYTY D+AY + K RGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKDRVLIKNDGSYTYLTPDIAYHEDKLRRGFDKLINIWGADHHGYIPRMKAAIEALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 + + V + ++V+LY++G KMSKR G+ +T+R +V+EVG D+VR+ + +D Sbjct: 360 DRGTLEVDIIQMVQLYKNGEKFKMSKRTGNAVTMRELVEEVGLDAVRYFFVKTAGDSHMD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD QS ENPV+Y QYA+AR SI R A + + L N++ E E D Sbjct: 420 FDLDLAVSQSNENPVYYAQYAHARISSILRAANE--QGFEASLENLNLLVAEKEED---- 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 ++ + +P+++ +A + P+++A Y+ DLA+ FH ++ + + +N++LT Sbjct: 474 -VLKKVGAFPQIVADAAKHRTPHRIANYIQDLAAAFHSFYN------AEKVLNQDNKELT 526 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L+ AV + + + L +IGV +P +M Sbjct: 527 EARLALITAVKTTLANALKLIGVSAPEKM 555 >gi|30265386|ref|NP_847763.1| arginyl-tRNA synthetase [Bacillus anthracis str. Ames] gi|47530933|ref|YP_022282.1| arginyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49188199|ref|YP_031452.1| arginyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|65317342|ref|ZP_00390301.1| COG0018: Arginyl-tRNA synthetase [Bacillus anthracis str. A2012] gi|165871340|ref|ZP_02215989.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|167635784|ref|ZP_02394094.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0442] gi|167640392|ref|ZP_02398656.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0193] gi|170688209|ref|ZP_02879420.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0465] gi|170708079|ref|ZP_02898527.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|177651880|ref|ZP_02934463.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0174] gi|190569103|ref|ZP_03022002.1| arginyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I] gi|227818129|ref|YP_002818138.1| arginyl-tRNA synthetase [Bacillus anthracis str. CDC 684] gi|229601148|ref|YP_002869577.1| arginine--tRNA ligase [Bacillus anthracis str. A0248] gi|254687194|ref|ZP_05151052.1| arginyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066] gi|254735489|ref|ZP_05193197.1| arginyl-tRNA synthetase [Bacillus anthracis str. Western North America USA6153] gi|254742250|ref|ZP_05199937.1| arginyl-tRNA synthetase [Bacillus anthracis str. Kruger B] gi|254755835|ref|ZP_05207867.1| arginyl-tRNA synthetase [Bacillus anthracis str. Vollum] gi|254761549|ref|ZP_05213569.1| arginyl-tRNA synthetase [Bacillus anthracis str. Australia 94] gi|254762174|ref|ZP_05214020.1| arginyl-tRNA synthetase [Bacillus anthracis str. Australia 94] gi|38372560|sp|Q81JT7|SYR1_BACAN RecName: Full=Arginyl-tRNA synthetase 1; AltName: Full=Arginine--tRNA ligase 1; Short=ArgRS 1 gi|30260064|gb|AAP29249.1| arginine--tRNA ligase [Bacillus anthracis str. Ames] gi|47506081|gb|AAT34757.1| arginyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49182126|gb|AAT57502.1| arginyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|164713007|gb|EDR18535.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|167511612|gb|EDR86994.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0193] gi|167528893|gb|EDR91650.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0442] gi|170127052|gb|EDS95931.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|170667902|gb|EDT18654.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0465] gi|172082584|gb|EDT67648.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0174] gi|190559771|gb|EDV13757.1| arginyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I] gi|227006270|gb|ACP16013.1| arginine--tRNA ligase [Bacillus anthracis str. CDC 684] gi|229265556|gb|ACQ47193.1| arginine--tRNA ligase [Bacillus anthracis str. A0248] Length = 556 Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 204/569 (35%), Positives = 327/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 + + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV +EFVSANPTG + Sbjct: 79 STEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV RY QAL + ++ Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E++ ++Y ++ + ++ DL++ ++ Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|206890670|ref|YP_002248471.1| arginyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742608|gb|ACI21665.1| arginyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 538 Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 213/553 (38%), Positives = 321/553 (58%), Gaps = 40/553 (7%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 IE P++ A G LST AM +++ L P TIA+ I+ I +SV +AG GFIN Sbjct: 25 IEIPKNEAFGDLSTPIAMEIAKKLKKPPRTIAQDIIQSIN-KSSFESVELAGPGFINFKF 83 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 ++ L +++ G + IG G K+ IEFVSANPTGP+H+GH R A +G LA++ Sbjct: 84 KNDFVFSELENLLKLGELFFTQNIGNGKKIQIEFVSANPTGPLHLGHGRGAALGAALANI 143 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + +GY V EYYINDAG Q+ L LSV+ Q L+ + ++PE Y G Y+ + KEL Sbjct: 144 LKEAGYNVFTEYYINDAGKQVEILGLSVYIALQN-LFGKNLEMPEECYKGEYINEIAKEL 202 Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD-FHRGDPSP 272 D Y + L N ++ + D+S + M+ I+ DL + D +ISE +H G+ Sbjct: 203 YDLYGNSLQNKEFDEIADFLIDFSYKKMLNEIKKDLDDFGVNFDNWISERKLYHTGE--- 259 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 ++ I L G++YE L F ST GDD DR ++KSDG+YT Sbjct: 260 VQRAILKLKELGFIYE----------------KDGALWFHSTAFGDDKDRVIVKSDGTYT 303 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 YFA+D+AY K K ERGFD +I + G+DH GY++R++A A+ +QI +LL ++V L Sbjct: 304 YFASDIAYHKNKIERGFDELINIWGADHHGYIQRVKAAVQALGMSDSQIKILLVQMVNLL 363 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 R+G P++MSKRAG F+TLR ++DE+G+D+ +F+ L R++ L+FD K+QS ENPV+ Sbjct: 364 REGKPVQMSKRAGTFVTLRELIDEIGADTTKFIFLTRRHDSHLEFDIEIAKKQSHENPVY 423 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 YVQYA+AR SIF +A+ +L F+ EL++I YP + E + Sbjct: 424 YVQYAHARINSIFVKAQSEPERFSGEL-----------FNEDELRIIKKALIYPMIFELS 472 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572 +EP+++ FYL +LA++FH ++ R V + N +LT RL L A+ ++ Sbjct: 473 VQMREPHRITFYLQELAALFHSYYHKYR-------VISENDELTETRLSLCKAIMFVLKH 525 Query: 573 GLNIIGVESPNEM 585 GL ++GV++P +M Sbjct: 526 GLRMLGVKAPEKM 538 >gi|239828630|ref|YP_002951254.1| arginyl-tRNA synthetase [Geobacillus sp. WCH70] gi|259511648|sp|C5D9R0|SYR_GEOSW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|239808923|gb|ACS25988.1| arginyl-tRNA synthetase [Geobacillus sp. WCH70] Length = 556 Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 212/588 (36%), Positives = 331/588 (56%), Gaps = 35/588 (5%) Query: 1 MYLFADFSSRLKNYLKE--IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58 M + R+K +K + E+++ + +++E PR+ AHG STN AM L+R Sbjct: 1 MNIVEQMKERIKEEIKRAVVSAGFAAEEEVPE-VILEVPREKAHGDYSTNMAMQLARIAK 59 Query: 59 LDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117 P IAE IV + K ++ + IAG GFIN Y+ YL +++ +I+ +G YG + Sbjct: 60 KPPRAIAEEIVQHMDKTKASIEKIDIAGPGFINFYMDNRYLTELIPTIIQAGASYGETNV 119 Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 GKG KV +EFVSANPTG +H+GH R A VGD+L +++ +G++VTREYYINDAG QI L Sbjct: 120 GKGQKVQVEFVSANPTGDLHLGHARGAAVGDSLCNILEKAGFDVTREYYINDAGNQIYNL 179 Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237 A SV RY QAL D ++PE Y G + +GK+LA+++ + ++ E++ L ++Y Sbjct: 180 AKSVEARYFQAL-GIDKEMPEDGYYGEDIIEIGKKLAEEHGDKYVHMDEQERLAFFREYG 238 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 + ++ I+ DL + D++ SE + I + + L +G++YE K Sbjct: 239 LNYELEKIKKDLADFRVTFDVWYSETSLYT--SGKIDETLALLRERGHIYE------KDG 290 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 T FRST GDD DR L+K DG+YTY D+AY + K RGF +I + G Sbjct: 291 AT----------WFRSTTFGDDKDRVLIKKDGTYTYLLPDIAYHQDKLRRGFTKIINIWG 340 Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 +DH GY+ R++A A+ + V + +LV LY++G +KMSKR G +T+R +++EV Sbjct: 341 ADHHGYIPRMKAAIEALGYDPDVLEVEIIQLVNLYQNGERVKMSKRTGKAVTMRELMEEV 400 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G D+ R+ R + LDFD QS ENPV+YVQYA+AR SI RQ +++ + Sbjct: 401 GLDATRYFFAMRSSDTHLDFDMDLAVSQSNENPVYYVQYAHARVSSILRQGEELQLSYEG 460 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 DL + I E E++L+ L E+P + A I + P+++ Y+++LAS H ++ Sbjct: 461 DL-QLDYIQTE-----KEIELLKKLGEFPSAVSEAAIKRMPHRITGYVFELASALHSFYN 514 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + N + + RL L+ AV + + L +IGV +P +M Sbjct: 515 AE------KVLDPENIEKSRARLALMKAVQITLQNALALIGVSAPEKM 556 >gi|301056832|ref|YP_003795043.1| arginyl-tRNA synthetase [Bacillus anthracis CI] gi|300379001|gb|ADK07905.1| arginyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI] Length = 556 Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 204/569 (35%), Positives = 328/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV +EFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQVEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV RY QAL + ++ Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E++ ++Y ++ + ++ DL++ ++ Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSEISLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|169351390|ref|ZP_02868328.1| hypothetical protein CLOSPI_02170 [Clostridium spiroforme DSM 1552] gi|169291612|gb|EDS73745.1| hypothetical protein CLOSPI_02170 [Clostridium spiroforme DSM 1552] Length = 553 Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 209/581 (35%), Positives = 327/581 (56%), Gaps = 39/581 (6%) Query: 9 SRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 + LKN LK+ I + VE + I+IE PRD HG STN AM L++ L +P IA Sbjct: 8 ATLKNVLKKAIISRGFVEDYDQENIIIEIPRDKTHGDYSTNLAMQLTKLLKRNPREIATA 67 Query: 68 IVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 IV I K +++ + IAG GFINL+L+ + I+ ++ YG++ G G K N+E Sbjct: 68 IVEAIDKETANIEKIEIAGPGFINLFLAKDAMTSIIKEVLDEKENYGKSNYGNGIKYNVE 127 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTG +H+GH + A VGD++ +M +GY+VTREYYINDAG QI+ LALS++ RYQ Sbjct: 128 FVSANPTGDLHLGHAKGAAVGDSICRIMEAAGYDVTREYYINDAGNQIHNLALSLYARYQ 187 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 QA + + +PE Y G + + ++ + + L PE+K + + + ++ I+ Sbjct: 188 QA-FGKEVTMPEDGYHGKDIIDIANKIKEIEGDKYLGLPEDKAIAYFRAKGTEYELQKIK 246 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 D L + D++ SE + + + + I+ L GY YE + Sbjct: 247 DILNEFRVSFDVWFSETSLY--EENKVVPTIEKLKEAGYTYE----------------ED 288 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366 L F+ST GDD +R L+KSDGSYTY D+AY K +RG++ ++ ++G+DH GY+ R Sbjct: 289 GALWFKSTEFGDDKNRVLIKSDGSYTYLTPDIAYHLNKLDRGYEYLVDLLGADHHGYINR 348 Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 ++A A+ Q+N+ + ++VR+ +G P+KMSKR G+ +T++ +++E+G D+ R+ Sbjct: 349 MKAAIQALGYNADQLNIDIIQMVRMMNNGEPVKMSKRTGNAVTIKDLIEEIGVDATRYFF 408 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD--FDLFPRNV 484 + + + DFD K S ENPV+Y QYA+AR SI QA D FDL N Sbjct: 409 VSKAANTPFDFDIGLAKSHSNENPVYYAQYAHARMCSIKTQADKAKIDYSDKFDLLVNN- 467 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 E++L+ H+ E+ VI ++ I + P+K+A Y+ LA +FH ++ Sbjct: 468 ---------KEIELVKHINEFRNVIVDSAINRAPHKIANYIQRLAQLFHSFYN------E 512 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + NN +L+ RL LV A + + LN+IGV +P +M Sbjct: 513 CYVIDENNIELSKQRLSLVEATRITMANALNLIGVSAPEKM 553 >gi|229099792|ref|ZP_04230716.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-29] gi|229105951|ref|ZP_04236573.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-28] gi|228677435|gb|EEL31690.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-28] gi|228683538|gb|EEL37492.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-29] Length = 556 Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 205/569 (36%), Positives = 326/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV IEFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQIEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LALSV RY QAL D ++ Sbjct: 139 HLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLDKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E+ + Y ++ + ++ DL++ ++ Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGLKYELAKLQKDLESFRVKF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EGGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAAALHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|218885953|ref|YP_002435274.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226701474|sp|B8DNX4|SYR_DESVM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|218756907|gb|ACL07806.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 551 Score = 367 bits (943), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 206/561 (36%), Positives = 318/561 (56%), Gaps = 38/561 (6%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDSVFIAGKGF 88 ++ +E PRD + G L+ N A+++S+ G+ P +A + ++ DP + SV IAG GF Sbjct: 24 EKATLEPPRDKSFGDLAANIALVISKDAGVPPRELASRLAGALRDSDPAIASVDIAGPGF 83 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 +N+ SP + R+ + + +G YG +G G K +E+VSANPTGP+H+GH R A +GD Sbjct: 84 LNVTYSPDFWRETVLHVEAAGDRYGATAVGAGRKAQVEYVSANPTGPLHIGHGRGAALGD 143 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 LA ++ F+GY+VT EYYINDAG Q+ L LSV+ R + L LPE +Y G Y+K Sbjct: 144 CLARVLRFAGYDVTTEYYINDAGRQMRLLGLSVWLRALE-LSGRPFTLPEDFYRGDYIKD 202 Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 + E+ K L++ PE + +Y++ ++M I+ DL ++H ++ SE R Sbjct: 203 IAAEMLAK-DPGLVDLPEAEGQDRCFEYAMNSIMDGIKQDLADFRVEHQVWFSELSLVR- 260 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 + + L G +E L FR+T +GDD DR L KSD Sbjct: 261 -EGAVEKTFERLKAAGLAFE----------------QDGALWFRTTTLGDDKDRVLRKSD 303 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 G+ TYFA+D+AY KY+RGFD ++ + G+DH GYV R+ A AA+ ++ Q +V+L +L Sbjct: 304 GTLTYFASDIAYHDNKYDRGFDLVVDIWGADHHGYVPRMRAAVAALGKRPEQFDVILVQL 363 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V L ++G I MS RAG F TL VV EVG+D+ RFM L RK+ LDFD VK++S + Sbjct: 364 VNLLQNGEQIAMSTRAGQFETLHDVVREVGADAARFMFLSRKSDSHLDFDLELVKQRSMD 423 Query: 449 NPVFYVQYAYARCRSIFRQAKD---IFPD-LDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 NPV+YVQYA+AR ++ R+A + + P LD +P+ EL L+ + Sbjct: 424 NPVYYVQYAHARVCAVLRKAAERAIVLPARLDAAALAPLTLPE-------ELDLLRLVDR 476 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 P + A P+ ++FYL ++A H +++ ++ + A + + + RL L+ Sbjct: 477 MPDTLSAAAEGLAPHHVSFYLMEVAGALHSYYA------KVPVLNAADAETIVARLALLR 530 Query: 565 AVASIINSGLNIIGVESPNEM 585 AV + +GLN++GVE+P M Sbjct: 531 AVGQAVANGLNLLGVEAPEAM 551 >gi|229118855|ref|ZP_04248202.1| Arginyl-tRNA synthetase [Bacillus cereus Rock1-3] gi|228664511|gb|EEL20006.1| Arginyl-tRNA synthetase [Bacillus cereus Rock1-3] Length = 556 Score = 367 bits (942), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 205/569 (36%), Positives = 326/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV IEFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQIEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LALSV RY QAL D ++ Sbjct: 139 HLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLDKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E+ + Y ++ + ++ DL++ ++ Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGLKYELAKLQKDLESFRVKF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EGGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAAALHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRNTLQNALAIVGVSAPEKM 556 >gi|312112663|ref|YP_003990979.1| arginyl-tRNA synthetase [Geobacillus sp. Y4.1MC1] gi|311217764|gb|ADP76368.1| arginyl-tRNA synthetase [Geobacillus sp. Y4.1MC1] Length = 556 Score = 367 bits (942), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 213/588 (36%), Positives = 332/588 (56%), Gaps = 35/588 (5%) Query: 1 MYLFADFSSRLKNYLKE--IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58 M + R+K +K + + E+++ D +++E PR+ AHG STN AM L+R Sbjct: 1 MNIVEQMKERMKEEIKRAVVSAGLAKEEEVPD-VILEVPREKAHGDYSTNMAMQLARIAK 59 Query: 59 LDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117 P IAE IV + V + IAG GFIN Y+ YL +++ I+ +G YG + Sbjct: 60 KPPRAIAEEIVKHFDQTKVSVKKIDIAGPGFINFYMDNRYLTELIPMIIEAGASYGETNV 119 Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 GKG KV +EFVSANPTG +H+GH R A VGD+L +++ +G++VTREYYINDAG QI L Sbjct: 120 GKGQKVQVEFVSANPTGDLHLGHARGAAVGDSLCNILEKAGFDVTREYYINDAGNQIYNL 179 Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237 A SV RY QAL D ++PE Y G + +GK+LA+++ + ++ E++ L ++Y Sbjct: 180 AKSVEARYFQAL-GIDKEMPEDGYYGDDIIEIGKKLAEEHGDKYVHMDEQERLAFFREYG 238 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 ++ ++ I+ DL + D++ SE ++ I + + L +G++YE K Sbjct: 239 LRYELEKIKKDLADFRVTFDVWYSETSLYK--SGKIDEALAVLRERGHIYE------KDG 290 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 T FRST GDD DR L+K DG+YTY D+AY + K RGF +I + G Sbjct: 291 AT----------WFRSTTFGDDKDRVLIKQDGTYTYLLPDIAYHQDKLRRGFAKIINIWG 340 Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 +DH GY+ R++A AA+ + V + +LV LY++G +KMSKR G +T+R +++EV Sbjct: 341 ADHHGYIPRMKAAIAALGYDPDVLEVEIIQLVNLYQNGERVKMSKRTGKAVTMRELMEEV 400 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G D+ R+ R + LDFD QS ENPV+YVQYA+AR SI RQ +++ + Sbjct: 401 GLDATRYFFAMRSSDTHLDFDMDLAVSQSNENPVYYVQYAHARVSSILRQGEELQLSYEG 460 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 DL + I E E++L+ L E+P + A + + P+++ Y+++LAS H ++ Sbjct: 461 DL-QLDYIQTE-----KEIELLKKLGEFPGAVSEAALKRMPHRITGYVFELASALHSFYN 514 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + N + + RL L+ AV + + L +IGV +P +M Sbjct: 515 AE------KVLDPENAEKSRARLALMKAVQITLQNALALIGVSAPEKM 556 >gi|302390698|ref|YP_003826519.1| arginyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646] gi|302201326|gb|ADL08896.1| arginyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646] Length = 568 Score = 367 bits (942), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 216/594 (36%), Positives = 335/594 (56%), Gaps = 42/594 (7%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIV---------IERPRDCAHGHLSTNAAMILSRP 56 D +++++ LKE+ ++K + D ++ IE P+ AHG + N AM +R Sbjct: 3 DVKAQIQDKLKELTVS-ALKKAVDDGVINLTKIPEFNIEVPQAEAHGDFAANVAMTAARE 61 Query: 57 LGLDPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115 + P IAE+I R++I ++ + +AG GFIN YLSP++ ++ I+ G YGR Sbjct: 62 AKMPPRKIAEIIKERMEISGTGIERIEVAGSGFINFYLSPTWAHGVIPVILSEGDAYGRQ 121 Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175 IGKG KV +EFVSANPTGPMH+G+ R A +GD LAS++ +GY+VTRE+YINDAG QI Sbjct: 122 DIGKGKKVQVEFVSANPTGPMHMGNARGAALGDALASVLEMAGYDVTREFYINDAGNQIE 181 Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235 LS+ RY + L + +PEG Y G +K +EL +K L+ + + Sbjct: 182 NFGLSLEARYLE-LLGLEGRIPEGGYHGEDIKDHMRELIEKEGDRFLHVDPAERRAYFIE 240 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 Y+++ + ++ DL+ + D++ SE H D ++++I L +GY YE Sbjct: 241 YALKKNIDRMKRDLENFGVHFDVWFSERSLH--DEGKVQEVIRLLTERGYTYE------- 291 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 L F++T G D L++ +G TYFA+D+AY K K++RGF+ +I + Sbjct: 292 ---------KDGALWFKATEFGVPKDEVLVRQNGIPTYFASDIAYHKDKFDRGFEWVIDI 342 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 G+DH G+V R++ AA+ ++ +++ +LVRLYR+G +MSKR G +TL +V+ Sbjct: 343 WGADHHGHVARMKGALAALGYDPEKLTIIIMQLVRLYRNGEIARMSKRTGRAVTLADLVE 402 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IF 472 EVG D+ RF R LDFD +QS+ENPV+YVQYA+AR SIFRQA + Sbjct: 403 EVGKDAARFFFNLRGADTHLDFDLDLAVKQSEENPVYYVQYAHARISSIFRQAAEQGVAV 462 Query: 473 PDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 P++ D P ++ S+ D +E+QLI LA++P I A PY++A Y +LA+ Sbjct: 463 PEVR-DRSPEDLEKLLSKLTDETEIQLIKKLADFPGEIRVAASTLSPYRIANYTLELAAA 521 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 FH ++ R V ++ LT RL LV AV ++ + I+G+ +P+ M Sbjct: 522 FHSFYNVCR-------VLTDDPDLTAARLMLVKAVQQVLRNAFRILGISAPDRM 568 >gi|212640560|ref|YP_002317080.1| arginyl-tRNA synthetase [Anoxybacillus flavithermus WK1] gi|226701372|sp|B7GMJ3|SYR_ANOFW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|212562040|gb|ACJ35095.1| Arginyl-tRNA synthetase [Anoxybacillus flavithermus WK1] Length = 556 Score = 366 bits (940), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 215/589 (36%), Positives = 325/589 (55%), Gaps = 37/589 (6%) Query: 1 MYLFADFSSRLKNYLKE--IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58 M + +LK +KE I + E + +++E P+D AHG STN AM L+R Sbjct: 1 MNIVEQMKQKLKEEIKEAVIRSGVATEADV-PSVILETPKDKAHGDYSTNVAMQLARVAK 59 Query: 59 LDPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117 P IAE IV + V V IAG GFIN Y+ YL +++ +I+ +G YG + Sbjct: 60 KAPRMIAEDIVRHFNGEAVFVKKVDIAGPGFINFYMDNRYLTELVPAILQAGDAYGETNV 119 Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 G+G KV +EFVSANPTG +H+GH R A VGD+L +++ +G++VTREYYINDAG QI L Sbjct: 120 GQGQKVQVEFVSANPTGSLHLGHARGAAVGDSLCNILKKAGFDVTREYYINDAGNQIANL 179 Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237 A SV RY QAL D+PE Y G + +GK+LA+++ + + E++ L + ++Y Sbjct: 180 AKSVEARYFQAL-GIKKDMPEDGYFGEDIIELGKKLAEEHGDKFVALDEQERLQLFREYG 238 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDD-FHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 + M I+ DL + D++ SE +H G I ++ L +G++YE Sbjct: 239 LAFEMDKIKKDLADFRVTFDVWYSETSLYHNG---KIDKALETLREKGHIYE-------- 287 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 FRST GDD DR L+K DG+YTY D+AY + K ERGF+ +I + Sbjct: 288 --------QDGATWFRSTTFGDDKDRVLIKQDGTYTYLLPDIAYHQDKLERGFEKIINIW 339 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G+DH GY+ R++A AA+ + V + +LV LY++G ++MSKR G +TLR +++E Sbjct: 340 GADHHGYIPRMKAAIAALGYDPDVLEVEIIQLVSLYQNGEKVRMSKRTGKAVTLRDLMEE 399 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG D+ R+ R + LDFD QS ENPV+Y QYA+AR S+ RQ ++ D Sbjct: 400 VGLDATRYFFAMRSSDTHLDFDMDLAVSQSNENPVYYAQYAHARVCSMLRQGEEQGWRYD 459 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 DL E E+ L+ L E+P + A + + P+++ Y++DLAS H + Sbjct: 460 GDL------SFTYELAEKEIDLLKKLGEFPSAVAEAAVKRSPHRMTNYIFDLASALHSFY 513 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + A N + + RL L+ AV + + L ++GV +P +M Sbjct: 514 NAE------KVLDAANVEKSRARLALMKAVQITLKNALALVGVHAPEKM 556 >gi|319935203|ref|ZP_08009642.1| arginyl-tRNA synthetase [Coprobacillus sp. 29_1] gi|319809853|gb|EFW06241.1| arginyl-tRNA synthetase [Coprobacillus sp. 29_1] Length = 553 Score = 366 bits (940), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 210/578 (36%), Positives = 328/578 (56%), Gaps = 37/578 (6%) Query: 11 LKNYLKE--IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68 LK LK+ ID VE LD+IVIE P+D HG S+N AM L++ L +P IA+ I Sbjct: 10 LKKVLKQAIIDLDF-VEDYNLDQIVIEIPKDKTHGDYSSNIAMQLTKILKRNPREIAQGI 68 Query: 69 VARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127 + + D ++D V IAG GFINL+L + I+ ++V YG++ GKG K NIEF Sbjct: 69 IETMNKDAGNIDHVEIAGPGFINLFLRKDAMTSIIKEVLVEQDHYGQSDFGKGIKYNIEF 128 Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187 VSANPTG +H+GH + A VGD++ +M +GY+VT+EYYINDAG QI LALS++ RY Q Sbjct: 129 VSANPTGDLHLGHAKGAAVGDSICRIMNAAGYDVTKEYYINDAGNQITNLALSLYARYLQ 188 Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247 AL + LPE Y G + + + + ++Y + + E++ + + + ++ I+D Sbjct: 189 AL-GQERQLPEDGYYGKDIIQIAESIKNEYGDKFAHVDEKEAIAYFRSIGTEHELQKIKD 247 Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307 LK + HD++ SE + + I I L QGY YE Sbjct: 248 ILKEFRVVHDVWFSETSLYA--ENKIEPTIQRLKDQGYTYEA----------------EG 289 Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367 L F+ST DD DR L+KSDGSYTY D+AY K +RG++ ++ ++G+DH GY+ R+ Sbjct: 290 ALWFKSTEFDDDKDRVLIKSDGSYTYLTPDIAYHLNKLDRGYEYLVDLLGADHHGYINRM 349 Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 +A A+ Q+N+ + ++VR+ +G +KMSKR G+ +T++ ++D++G D+ R+ + Sbjct: 350 KAAIQALGYNADQLNIDIMQMVRMVENGEVVKMSKRTGNAVTIKDLIDDIGVDASRYFFV 409 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487 + S DFD K +S +NPV+Y QYA+AR SI RQA+ + ++ D + P+ Sbjct: 410 SKAASSPFDFDLGLAKSKSNDNPVYYAQYAHARMCSIERQAQTVGIEV-ADHYELLTHPK 468 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 E++L+ H+ E+ I + + P+K+A Y+ LA +FH ++ Sbjct: 469 -------EIELVKHINEFRNEIVESAKQRAPHKIANYIQRLAQLFHSFYND------CYV 515 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + NR+L+ RL LV A + + LN+IGV +P +M Sbjct: 516 IDEANRELSSQRLSLVRATQITLKNALNLIGVSAPEKM 553 >gi|229136179|ref|ZP_04264932.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-ST196] gi|228647338|gb|EEL03420.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-ST196] Length = 556 Score = 366 bits (939), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 204/569 (35%), Positives = 325/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEDLVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV IEFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQIEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LALSV RY QAL + ++ Sbjct: 139 HLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E+ + Y ++ + ++ DL + + Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGLKYELAKLQKDLASFRVNF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EGGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ + D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLAIGGDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|229176040|ref|ZP_04303534.1| Arginyl-tRNA synthetase [Bacillus cereus MM3] gi|228607384|gb|EEK64712.1| Arginyl-tRNA synthetase [Bacillus cereus MM3] Length = 556 Score = 366 bits (939), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 204/569 (35%), Positives = 326/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV IEFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQIEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LALSV RY QAL + ++ Sbjct: 139 HLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E+ + Y ++ + ++ DL++ ++ Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGLKYELAKLQKDLESFRVKF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDAALAVLKERDEIFE----------------EGGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLAAGGDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNSLAIVGVSAPEKM 556 >gi|229020582|ref|ZP_04177323.1| Arginyl-tRNA synthetase [Bacillus cereus AH1273] gi|229026799|ref|ZP_04183131.1| Arginyl-tRNA synthetase [Bacillus cereus AH1272] gi|228734522|gb|EEL85184.1| Arginyl-tRNA synthetase [Bacillus cereus AH1272] gi|228740720|gb|EEL90977.1| Arginyl-tRNA synthetase [Bacillus cereus AH1273] Length = 556 Score = 366 bits (939), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 203/569 (35%), Positives = 326/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +++E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VILESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV IEFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQIEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LALSV RY QAL + ++ Sbjct: 139 HLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E+ + Y ++ + ++ DL++ ++ Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGLKYELAKLQKDLESFRVKF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDAALAVLKERDEIFE----------------EGGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|85860177|ref|YP_462379.1| arginyl-tRNA synthetase [Syntrophus aciditrophicus SB] gi|109895044|sp|Q2LVV5|SYR_SYNAS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|85723268|gb|ABC78211.1| arginyl-tRNA synthetase [Syntrophus aciditrophicus SB] Length = 562 Score = 366 bits (939), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 210/556 (37%), Positives = 323/556 (58%), Gaps = 33/556 (5%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSVFIAGKGFIN 90 + +E +D HG +TN AM+++ ++P IAE+I + + + + IAG GFIN Sbjct: 38 VEMEMTKDTVHGDYATNFAMVMASHARMNPRKIAEMISSHFRDGEQILEKTEIAGPGFIN 97 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 ++ + + L I G YG G+G KV +EFVSANPTGP+H+GH R AVVGD + Sbjct: 98 FFVRENVWAEQLKDIESLGNHYGSAETGRGKKVQVEFVSANPTGPLHIGHARGAVVGDVI 157 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+++ SGYE+ REYYINDAG Q+N L SV++RYQ+ L + P+ Y G Y++ + Sbjct: 158 ANILGMSGYEIFREYYINDAGNQMNNLGKSVWYRYQE-LLGRSVEFPDTCYQGDYIREIA 216 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 ++ K L E+ + DY+ +++ I+ DLK I D + SE + + D Sbjct: 217 GDILKKDGDIHLTSNEDSNIRFFTDYAAGIILEEIKQDLKDFGIVFDKYFSERELYVNDG 276 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + ++ +L +G++Y D + L F++T GDD DR +++ +G Sbjct: 277 --VARLLADLEEKGFIYR----------------DDETLWFKTTDFGDDKDRVVVRKNGE 318 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFAAD+AY K KYERGFD++I + G+DH GY+ R+ A A+ K + V+L +LV Sbjct: 319 PTYFAADIAYHKNKYERGFDSVIDIWGADHHGYIPRMHAGIQALGHSKDALRVVLVQLVN 378 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L RDG P+ MS R+G+F+T++ VVDEVG D+ R+ L R++ LDFD K QS ENP Sbjct: 379 LLRDGKPVAMSTRSGEFVTMKEVVDEVGRDAARYNFLMRRSDSHLDFDLEVAKRQSNENP 438 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 V+YVQYA+AR SI R AK+ +L F+ NV PQ E+ LI L +P V+ Sbjct: 439 VYYVQYAHARICSILRMAKERGIELPSFE----NVEPQLLRI-PEEIALIKTLTRFPEVV 493 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 E + EP+++ FYL DLA +FH +++ + V +++ +T RL LV + ++ Sbjct: 494 EGSARTLEPHRITFYLNDLAGLFHSYYNKYK-------VISDDEAMTRTRLFLVKCIQTV 546 Query: 570 INSGLNIIGVESPNEM 585 + + L ++GV +P +M Sbjct: 547 LKNALTLLGVSAPEKM 562 >gi|229087850|ref|ZP_04219963.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-44] gi|228695457|gb|EEL48329.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-44] Length = 556 Score = 366 bits (939), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 201/555 (36%), Positives = 319/555 (57%), Gaps = 32/555 (5%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFIN 90 +V+E P+D HG STN AM L+R P IAE ++A K ++ + IAG GFIN Sbjct: 33 VVLESPKDKTHGDFSTNMAMQLARVAKKAPRMIAEELIANFDKAKASIEKIEIAGPGFIN 92 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 Y+ SYL ++ +IV +G YG GKG KV IEFVSANPTG +H+GH R A VGDTL Sbjct: 93 FYMDNSYLTDLIPAIVKAGEAYGETNTGKGEKVQIEFVSANPTGDLHLGHARGAAVGDTL 152 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +++A +GY+V+REYYINDAG QI+ LALSV RY QAL D ++PE Y G + +G Sbjct: 153 CNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLDKEMPEDGYHGADIIGIG 211 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 + LA+++ E++ ++Y ++ + ++ DL++ ++ D++ SE ++ Sbjct: 212 QRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKFDVWFSETSLYKN-- 269 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I + L + ++E + FRS GDD +R L+K+DGS Sbjct: 270 GKIDAALAVLKERDEIFE----------------EDGATWFRSMTYGDDKNRVLIKNDGS 313 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ K + V + ++V+ Sbjct: 314 YTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGYDKDTLEVEIIQMVQ 373 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 LY++G +KMSKR G +TLR +++EVG D++R+ R + LDFD +S ENP Sbjct: 374 LYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSSDSHLDFDMDLAVSKSNENP 433 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+Y QYA+AR SI RQ +++ D+ + V ++ E++L+ L E+P V+ Sbjct: 434 VYYAQYAHARVCSILRQGEELGLTAGGDVNYKLVASEK------EVELLKKLGEFPAVVA 487 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A + P+++ Y ++LA+ H ++ + + +N +L+ R L+ AV + Sbjct: 488 DAAQKRLPHRITSYAFELAAALHSFYNAE------KVLNQDNLELSKARYDLMRAVRITL 541 Query: 571 NSGLNIIGVESPNEM 585 + L ++GV +P +M Sbjct: 542 QNALALVGVSAPEKM 556 >gi|229014529|ref|ZP_04171646.1| Arginyl-tRNA synthetase [Bacillus mycoides DSM 2048] gi|228746749|gb|EEL96635.1| Arginyl-tRNA synthetase [Bacillus mycoides DSM 2048] Length = 556 Score = 366 bits (939), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 204/569 (35%), Positives = 325/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEDLVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV IEFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQIEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LALSV RY QAL + ++ Sbjct: 139 HLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E+ + Y ++ + ++ DL++ + Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGLKYELAKLQKDLESFRVNF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EGGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|163943048|ref|YP_001647932.1| arginyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] gi|163865245|gb|ABY46304.1| arginyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] Length = 556 Score = 366 bits (939), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 204/569 (35%), Positives = 325/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEDLVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV IEFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQIEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LALSV RY QAL + ++ Sbjct: 139 HLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E+ + Y ++ + ++ DL + + Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGLKYELAKLQKDLASFRVNF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L ++ ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKQRDEIFE----------------EGGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|229065010|ref|ZP_04200308.1| Arginyl-tRNA synthetase [Bacillus cereus AH603] gi|228716311|gb|EEL68023.1| Arginyl-tRNA synthetase [Bacillus cereus AH603] Length = 556 Score = 365 bits (938), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 204/569 (35%), Positives = 324/569 (56%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV IEFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVSAGEAYGETNTGKGEKVQIEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LALSV RY QAL + ++ Sbjct: 139 HLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E+ + Y ++ + ++ DL + + Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGLKYELAKLQKDLASFRVNF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EGGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|229170069|ref|ZP_04297760.1| Arginyl-tRNA synthetase [Bacillus cereus AH621] gi|228613416|gb|EEK70550.1| Arginyl-tRNA synthetase [Bacillus cereus AH621] Length = 556 Score = 365 bits (938), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 204/569 (35%), Positives = 324/569 (56%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV IEFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQIEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LALSV RY QAL + ++ Sbjct: 139 HLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E+ + Y ++ + ++ DL + + Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGLKYELAKLQKDLASFRVNF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EGGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|304407316|ref|ZP_07388969.1| arginyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] gi|304343757|gb|EFM09598.1| arginyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] Length = 558 Score = 365 bits (938), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 206/565 (36%), Positives = 319/565 (56%), Gaps = 39/565 (6%) Query: 26 KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIA 84 ++ L V+E PRD +HG L+TNAAM L++ +P IAE I+A + ++S IA Sbjct: 28 REELPAFVLEVPRDKSHGDLATNAAMQLTKLAKRNPRQIAEAIIANLDTASASIESAEIA 87 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 G GFIN L+ SYL +++ ++ +G YGR G G +V +EFVSANPTG +H+GH R A Sbjct: 88 GPGFINFRLNKSYLYPVVTEVLAAGENYGRVNAGAGKRVEVEFVSANPTGSLHLGHARGA 147 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204 VGD L +++ F+G+EVTREYYINDAG Q+ LA S+ RY+QAL ++ +PE Y G Sbjct: 148 AVGDALCNVLDFAGHEVTREYYINDAGKQVENLAFSIEARYKQAL-GQEAVMPEDGYHGA 206 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 + +ELA + LL+ P+++ + Y ++ + I+ DL + D++ SE Sbjct: 207 DIVGFAQELAAQEGDRLLSLPDDERFIFFRQYGLERELDKIKRDLGRFRVGFDLWYSETS 266 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 + + + +D L G+VYE + + GDD +R L Sbjct: 267 LY--EQGLVEQGLDALRATGHVYE----------------EEGATWLNTMQFGDDKNRVL 308 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 +K+DGSYTY D+AY + KY RG+D +I + G+DH GY+ R++A A+ ++ VL Sbjct: 309 VKNDGSYTYLTPDIAYHRVKYGRGYDRLINIWGADHHGYIPRMKAAMEALGNDPGKLTVL 368 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 + ++V L+++G +KMSKR G +T+ ++DEVG D++R+ R LDFD Sbjct: 369 IAQMVSLFQNGEKVKMSKRTGKAVTMEDLMDEVGVDAIRYFFTMRSMDSHLDFDMDLAVS 428 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDL----DFDLFPRNVIPQESEFDTSELQLIV 500 S ENPVFYVQYA+AR SIFRQA++ + + DL + + E E+D L+ Sbjct: 429 TSNENPVFYVQYAHARICSIFRQAEEQGIAMRSLSEIDL---SRLVTEQEYD-----LLR 480 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 L E P+ I +A P++L Y+Y+LA+ FH ++ R V ++ + T RL Sbjct: 481 KLGELPQEITDAAEQYAPHRLIRYVYELAAQFHSYYKAER-------VMTDDAEQTQARL 533 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 L+ + +I + L ++GV +P M Sbjct: 534 ALLASTRIVIANVLKLVGVTAPERM 558 >gi|89897692|ref|YP_521179.1| arginyl-tRNA synthetase [Desulfitobacterium hafniense Y51] gi|219670842|ref|YP_002461277.1| arginyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2] gi|122997116|sp|Q24MK7|SYR_DESHY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|254782959|sp|B8FZ89|SYR_DESHD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|89337140|dbj|BAE86735.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219541102|gb|ACL22841.1| arginyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2] Length = 561 Score = 365 bits (938), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 206/558 (36%), Positives = 320/558 (57%), Gaps = 38/558 (6%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFINL 91 V+E PR+ HG +TN AM+L++ P IA +++ + + + + IAG GFIN Sbjct: 37 VLEEPREKQHGDWATNLAMVLTKQARKAPRDIATILIKHLDTEGTFITASEIAGPGFINF 96 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P++L ++ ++ +YG+ +G+G KV +EFVSANPTG +H+G+ R A +GD+LA Sbjct: 97 RLDPNWLTGVIPEVLNLEADYGKVNLGQGKKVQVEFVSANPTGLLHMGNARGAALGDSLA 156 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +L+A +GYEV+RE+YINDAG QI ALS+ RY Q L D PEG Y G L K Sbjct: 157 ALLAMAGYEVSREFYINDAGNQIYNFALSLEARYLQ-LMGQDVPFPEGGYHGEDLIDTVK 215 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 L +K ++ LN ++ + Y+++ + IR+ L + + +D + SE H D Sbjct: 216 GLIEKVGNKYLNVDQDLRREFLVRYALEEKLTSIRETLTDMGVHYDCWFSEQSLH--DSG 273 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 ++D ++ L +QGY+YE + Q L +ST+ GD+ D +++ +G+ Sbjct: 274 FVKDTMEKLEQQGYIYE---------------KEGAQWL-KSTLFGDEKDEVVVRGNGTP 317 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 TYFAAD+AY + K+ERGFD +I + G+DH G+V R++ +A+ + ++L +LVRL Sbjct: 318 TYFAADIAYHRNKFERGFDRVINIWGADHHGHVARMKGAMSALGYDPENLQIILMQLVRL 377 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 ++G ++MSKR+G +ITLR ++DEVG D+ RF + R ++FD K +S +NPV Sbjct: 378 IQNGEVVRMSKRSGQYITLRELMDEVGKDAARFFFIMRDPDSTVEFDLDLAKAESSDNPV 437 Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPR 507 +YVQYA+AR SI RQA + + IPQE E E +L+ +AE P Sbjct: 438 YYVQYAHARLCSILRQAAE-------QGYNTAGIPQEGELKRLQSNEERELLKKIAELPN 490 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 IE A EP++LA Y+ DLA +FH ++ R V + L RL LV + Sbjct: 491 EIEVAARLTEPHRLARYVLDLAGLFHSFYNSQR-------VLVDEEGLREARLGLVRSTK 543 Query: 568 SIINSGLNIIGVESPNEM 585 ++ + L I+GV +P M Sbjct: 544 QVLANVLGILGVTAPERM 561 >gi|228988590|ref|ZP_04148676.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228771041|gb|EEM19521.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 556 Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 203/569 (35%), Positives = 327/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GK KV +EFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKREKVQVEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LALSV RY QAL + ++ Sbjct: 139 HLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E++ ++Y ++ + ++ DL++ ++ Sbjct: 198 PEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|229034001|ref|ZP_04188951.1| Arginyl-tRNA synthetase [Bacillus cereus AH1271] gi|228728309|gb|EEL79335.1| Arginyl-tRNA synthetase [Bacillus cereus AH1271] Length = 556 Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 204/569 (35%), Positives = 326/569 (57%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D +G STN AM L+R P IAE +VA K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTNGDFSTNMAMQLARVAKKAPRMIAEELVANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ +IV +G YG GKG KV IEFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTGKGEKVQIEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LALSV RY QAL + ++ Sbjct: 139 HLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ E+ + Y ++ + ++ DL++ ++ Sbjct: 198 PEDGYHGADIIGIGKLLAEEFGDRYAKADAEESYEFYRSYGLKYELAKLQKDLESFRVKF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDAALAVLKERDEIFE----------------EGGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D+ + V ++ E+ Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGDVNYKLVTSEK------EV 473 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P V+ +A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 474 ELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + + L I+GV +P +M Sbjct: 528 KARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|152977542|ref|YP_001377059.1| arginyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152026294|gb|ABS24064.1| arginyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98] Length = 556 Score = 365 bits (936), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 200/569 (35%), Positives = 323/569 (56%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +++E P+D HG STN AM L+R P IAE ++ K Sbjct: 20 LKAELATEEQIPN-VILETPKDKTHGDFSTNMAMQLARVAKKAPRMIAEELITNFNKEKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN ++ SYL ++ +IV +G YG GKG K+ +EFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFHMDNSYLTDLIPTIVKAGEAYGETNTGKGEKIQVEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LALSV RY QAL + ++ Sbjct: 139 HLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +GK LA+++ + E++ + Y ++ + ++ DL + ++ Sbjct: 198 PEDGYHGADIMEIGKRLAEEFGDRYVKADEKESYEFYRQYGLKYELAKLQKDLDSFRVKF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRST Sbjct: 258 DVWFSETSLYKN--GKIDAALAVLKERNEIFE----------------EGGATWFRSTAY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD DR L+K DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKDRVLIKKDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 +K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 EKETLEVEIIQMVQLYQNGEKVKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D+ + ++ E E D Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLHAGGDVNYK-LVASEKEID---- 474 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 L+ L E+P + A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 475 -LLKKLGEFPAAVAEAAQKRLPHRITSYAFELAAALHSFYNAE------KVLNQDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +L+ AV + + L ++GV +P +M Sbjct: 528 KARYELMKAVRITLQNALALVGVSAPEKM 556 >gi|194016224|ref|ZP_03054838.1| arginyl-tRNA synthetase [Bacillus pumilus ATCC 7061] gi|194011697|gb|EDW21265.1| arginyl-tRNA synthetase [Bacillus pumilus ATCC 7061] Length = 557 Score = 364 bits (935), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 212/589 (35%), Positives = 332/589 (56%), Gaps = 42/589 (7%) Query: 6 DFSSRLKNYLKE------IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 + + ++K+ LKE + + E ++ D +++E P+D HG STN AM L+R Sbjct: 2 NIAEQVKDALKEEIIAAVVKAGLADESQVPD-VLLEVPKDKTHGDYSTNMAMQLARIAKK 60 Query: 60 DPLTIAELIV-ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IV A K ++ + IAG GFIN+Y++ YL K++ +++ + YG G Sbjct: 61 APRQIAEDIVKAFDKGKASIEKLDIAGPGFINIYMNNQYLTKLIPAVLEAKEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G KV +EFVSANPTG +H+GH R A VGD+L +++ +G+EV+REYYINDAG QIN LA Sbjct: 121 GGQKVQVEFVSANPTGDLHLGHARGAAVGDSLCNILDKAGFEVSREYYINDAGNQINNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY +AL + ++PE Y G +K +G++LAD++ ++ PEE+ + ++Y + Sbjct: 181 LSVEVRYFEAL-GLEKEMPEDGYRGEDIKGIGQKLADEFGDRFVHEPEEERMKFFREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + ++ +R DL+ + D++ SE + + I ++ L +GYV+E Sbjct: 240 KYELEKLRVDLENFRVPFDVWYSETSLY--ENGKIEPALETLRAKGYVFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + RST GDD DR L+K DGS+TY D+AY K K +RGFD +I + G+ Sbjct: 288 ------EDGATWLRSTDFGDDKDRVLIKKDGSFTYLLPDIAYHKDKLDRGFDQLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ ++ V + +LV LY++G +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYPAGKLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA--KDIFPDLD 476 D+ R+ R + +DFD S ENPV+Y QYA+AR S+ RQ K P+L+ Sbjct: 402 LDATRYFFAMRSAATHMDFDLDLAISTSNENPVYYAQYAHARICSMLRQGEEKGYEPNLE 461 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 F I E E+D L+ + +P V+ A + P+++ Y+YDLAS H + Sbjct: 462 KADFSH--IQSEKEYD-----LLKIIGSFPEVVAEAAEKRIPHRVTNYIYDLASALHSFY 514 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + N T RL L+ A + + L +IGV +P +M Sbjct: 515 NAE------KVIDVENETKTTARLSLMKATQITLANALKLIGVSAPEKM 557 >gi|253577362|ref|ZP_04854679.1| arginyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] gi|251843262|gb|EES71293.1| arginyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] Length = 559 Score = 364 bits (934), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 210/559 (37%), Positives = 312/559 (55%), Gaps = 39/559 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFIN 90 IV+E P+D AHG +TNAAM LSR +P IAE I+ ++ ++ +AG GFIN Sbjct: 35 IVLEVPKDKAHGDFATNAAMQLSRIAKKNPRQIAEEILGQLDYGKAGIEKAEVAGPGFIN 94 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 LS SYL IL + G YGR +G G KV +EFVSANPTG +H+GH R A VGD L Sbjct: 95 FTLSKSYLYPILLQVYREGENYGRTTLGNGKKVQVEFVSANPTGSLHLGHARGAAVGDAL 154 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +++ F GY+VTREYYINDAG QI L S+ RY+Q L D ++PE Y G +K Sbjct: 155 CNVLDFVGYDVTREYYINDAGNQIVNLIKSIEARYRQEL-GQDVEMPEDGYHGEDIKGFA 213 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 KEL + +LL PEE+ ++ + ++ + I+ DL+ ++ D++ SE ++ Sbjct: 214 KELVAEQGDKLLGMPEEERTAFLRKFGLEKELSKIQRDLERFRVRFDVWFSETSLYQ--D 271 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + + L +G YE ++T GDD DR L+K+DG+ Sbjct: 272 GQVEASLSELREKGQTYE----------------QDGATWLKTTAYGDDKDRVLVKNDGT 315 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTY D+AY + KY+RGFD +I + G+DH GY+ R++A A+ + ++ VL+ ++V Sbjct: 316 YTYLTPDIAYHRNKYDRGFDRIINIWGADHHGYIPRVKAAMQAIGKDPEKLTVLIAQMVS 375 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L++DG +KMSKR G +T+ ++DEVG D +R+ R LDFD S ENP Sbjct: 376 LFQDGEKVKMSKRTGKAVTMVDLMDEVGVDPIRYFFTMRSMDSHLDFDMDLAISTSNENP 435 Query: 451 VFYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 V+YVQYA+AR SIFRQA++ I + +L + + E E+D L+ L E P Sbjct: 436 VYYVQYAHARICSIFRQAEEQGIQIPAAENVNL---SKLTAEHEYD-----LLRKLGELP 487 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 I A P++L Y+Y+LA++FH ++ R V + + RL L+ V Sbjct: 488 EEINVAAENYAPHRLVRYVYELAALFHSYY-------RAERVITEDAEQAAARLVLLGGV 540 Query: 567 ASIINSGLNIIGVESPNEM 585 +++ + L +IGV +P +M Sbjct: 541 RTVLANVLRLIGVSAPEKM 559 >gi|167757354|ref|ZP_02429481.1| hypothetical protein CLORAM_02904 [Clostridium ramosum DSM 1402] gi|167703529|gb|EDS18108.1| hypothetical protein CLORAM_02904 [Clostridium ramosum DSM 1402] Length = 554 Score = 363 bits (933), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 208/589 (35%), Positives = 333/589 (56%), Gaps = 39/589 (6%) Query: 1 MYLFADFSSRLKNYLKE--IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58 M + LK LK+ I C VE+ + I IE P+D +HG STN AM L++ L Sbjct: 1 MMAINKIEATLKGALKQAIIACGF-VEEYDQESITIEIPKDKSHGDYSTNLAMQLTKLLK 59 Query: 59 LDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117 +P IAE I+ + K + +++ V IAG GFINL+L+ + I+ ++ YG Sbjct: 60 RNPRQIAEAIIEALDKENANIEKVEIAGPGFINLFLAKDAMTSIIKEVLEEKEAYGTTTY 119 Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 G+GTK N+EFVSANPTG +H+GH + A VGD++ +M+ +GY+VTREYYINDAG QI+ L Sbjct: 120 GQGTKYNVEFVSANPTGDLHLGHAKGAAVGDSICRIMSAAGYDVTREYYINDAGNQIHNL 179 Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237 ALS++ RY+QA + D +PE Y G + + ++ + + L E K + ++ Sbjct: 180 ALSLYARYKQA-FGQDVTMPEDGYHGKDIIDIATKIKEIDGDKYLEMDEGKAIAFFRNKG 238 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 + ++ I+D L + D++ SE + D + I+ L GY YE Sbjct: 239 TEYELQKIKDILNEFRVSFDVWFSETSLYENDR--VVPTIEKLKAAGYTYE--------- 287 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 + L F+ST GDD DR L+KSDGSYTY D+AY K +RG++ ++ ++G Sbjct: 288 -------EEGALWFKSTEFGDDKDRVLIKSDGSYTYLTPDIAYHLNKLDRGYEYLVDLLG 340 Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 +DH GY+ R++A A+ Q+N+ + ++VR+ +G P+KMSKR G+ +T++ +++E+ Sbjct: 341 ADHHGYINRMKAAIQALGYNADQLNIDIIQMVRMMNNGEPVKMSKRTGNAVTIKDLIEEI 400 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G D+ R+ + + + DFD K +S ENPV+Y QYA+AR SI QA ++D+ Sbjct: 401 GVDATRYFFVSKAANTPFDFDIGLAKSKSNENPVYYAQYAHARMCSIKAQAAK--ANIDY 458 Query: 478 -DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 D + V P+ E++L+ H+ E+ VI ++ I + P+K+ Y+ LA +FH + Sbjct: 459 SDKYDLLVNPK-------EIELVKHINEFRNVIIDSAINRTPHKITNYVQRLAQLFHSFY 511 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ RL LV A + + LN+IGV +P +M Sbjct: 512 N------ECYVIDEDNLELSGQRLALVEATRITMANALNLIGVSAPEKM 554 >gi|289523473|ref|ZP_06440327.1| arginine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503165|gb|EFD24329.1| arginine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 558 Score = 363 bits (933), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 208/562 (37%), Positives = 320/562 (56%), Gaps = 44/562 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I+IERPR G +TN AM+++R + P IA++I++ +K V+ V +AG GFIN Sbjct: 33 IIIERPRRENQGDYATNVAMLMARNWEMKPRDIAQVIISHLKKSEYVEKVEVAGPGFINF 92 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +LS ++ +++ I+ G +YG+ +G+G + +EFVSANPTGP+H+GH R A VGD +A Sbjct: 93 FLSDLWMSELIREIIDKGEDYGKRDLGEGKRAQVEFVSANPTGPLHIGHGRGAAVGDVMA 152 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD-LPEGYYPGVYLKHVG 210 ++++F+G+ V REYYINDAG Q+ L SV RY + L +++ PE Y G Y+ + Sbjct: 153 NILSFAGWYVEREYYINDAGLQMKLLGRSVQARYFELLGRSEAAPFPEDGYKGDYIHEIA 212 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 +E+ D + L P E+ L KDY+V+ ++ I+ DL+ + D++ SE H + Sbjct: 213 QEIIDIEGDKFLGLPIEETLDYFKDYAVKVILNGIKKDLEDFRVLFDVWFSEKTLH--ER 270 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 IR+++D L ++G YE + +RST GD+ DR L++S+G Sbjct: 271 GLIREMVDFLMKRGLAYE----------------KEGAIWYRSTKFGDEKDRVLIRSNGE 314 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFA+D+AY K K++RGFD +I V G+DH GYV R++A A+ + VLL + V Sbjct: 315 PTYFASDVAYHKDKFDRGFDLVIDVWGADHHGYVPRMKAAVQALGRSPDDLQVLLIQFVS 374 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L + G + MS RAG+F+TLR ++DEVG D++R+ L RK LDFD K S +NP Sbjct: 375 LIKQGRMVSMSTRAGEFVTLREMMDEVGVDAMRYFFLMRKCDSHLDFDIDLAKSASTDNP 434 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV-IPQESEFDTSELQ------LIVHLA 503 V+YVQYA AR SIF++A R + +P + D S L+ LI L Sbjct: 435 VYYVQYASARLHSIFKEAS-----------SRGIELPAPEKVDISLLKTEEEKALIKCLG 483 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 ++P + A P+ + FY Y+LA FH ++ R V + L+ RL LV Sbjct: 484 KFPEEVAKAAKELSPHLIVFYAYELAKAFHSFYNAHR-------VLGEEKSLSDARLILV 536 Query: 564 HAVASIINSGLNIIGVESPNEM 585 AV ++ + L ++ + +P M Sbjct: 537 RAVQVVLLNVLGLLKINAPEVM 558 >gi|258513416|ref|YP_003189638.1| arginyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771] gi|257777121|gb|ACV61015.1| arginyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771] Length = 570 Score = 363 bits (933), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 203/573 (35%), Positives = 326/573 (56%), Gaps = 52/573 (9%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA----RIKIDPD------V 78 L V+E PR+ HG ++N AM+L++P + P IAE+ V IK D + Sbjct: 34 LPEFVVEVPREKGHGDFASNLAMMLAKPARMAPRRIAEIFVEHLNEEIKSDKQDGSFILL 93 Query: 79 DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138 D V +AG GFIN YL+P+++ + L I G +YGR ++G G KV +EFVSANPTG +H+ Sbjct: 94 DRVEVAGPGFINFYLNPAWVYETLRIIETEGNDYGRVMLGSGKKVQVEFVSANPTGLLHM 153 Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198 G+ R A +GD LASL+ F+GY+VTRE+Y+NDAG QI L++ RY Q L D +PE Sbjct: 154 GNARGAALGDCLASLLDFAGYQVTREFYVNDAGNQIENFGLTLEARYLQ-LLGQDCPVPE 212 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y G+ + + DKY ++ L+ P + ++ +Y+++ ++ IR+ L +++D+ Sbjct: 213 DGYHGLDIIQTMQGFVDKYGNKFLSAPGKVRRMVMINYALEEKLREIRNTLFDFGVRYDV 272 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + SE D H + + + + L +G++YE L F++T G Sbjct: 273 WFSEKDLH--ESGAVNEAVAILKEKGHIYE----------------KEGALWFKATEFGV 314 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378 + D +++S+G TYFAAD+AY K K++RGFD +I + G+DH G+V R++ A+ Sbjct: 315 EKDEVVVRSNGVPTYFAADIAYHKNKFDRGFDRVINIWGADHHGHVSRVKGAVEAIGYDP 374 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438 ++++L +LVRL+R ++MSKR G F+TL +++EVG D R+ + R LDFD Sbjct: 375 ESLDIILMQLVRLFRGTEIVRMSKRTGQFVTLDELIEEVGRDVARYFFVMRSADSHLDFD 434 Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS---- 494 K QS ENPV+Y+QYA+AR SI RQ + +PQ D + Sbjct: 435 LELAKSQSNENPVYYIQYAHARICSILRQLDE----------QGGRLPQAGAVDLALLKE 484 Query: 495 --ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552 EL LI +A++P I +A + P++LA Y+++LA + H ++ R V ++ Sbjct: 485 EIELDLIRKMADFPEEIASAAESLAPHRLARYVHELAGLLHSFYNSHR-------VIVDD 537 Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L+ RL LV +V ++I + L+++G+ +P +M Sbjct: 538 AALSEARLVLVMSVKTVIKNALSLLGIAAPEKM 570 >gi|237735571|ref|ZP_04566052.1| arginyl-tRNA synthetase [Mollicutes bacterium D7] gi|229381316|gb|EEO31407.1| arginyl-tRNA synthetase [Coprobacillus sp. D7] Length = 553 Score = 363 bits (933), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 207/581 (35%), Positives = 332/581 (57%), Gaps = 39/581 (6%) Query: 9 SRLKNYLKE--IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + LK LK+ I C VE+ + I IE P+D +HG STN AM L++ L +P IAE Sbjct: 8 ATLKGALKQAIIACGF-VEEYDQESITIEIPKDKSHGDYSTNLAMQLTKLLKRNPRQIAE 66 Query: 67 LIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 I+ + K + +++ V IAG GFINL+L+ + I+ ++ YG G+GTK N+ Sbjct: 67 AIIEALDKENANIEKVEIAGPGFINLFLAKDAMTSIIKEVLEEKEAYGTTTYGQGTKYNV 126 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTG +H+GH + A VGD++ +M+ +GY+VTREYYINDAG QI+ LALS++ RY Sbjct: 127 EFVSANPTGDLHLGHAKGAAVGDSICRIMSAAGYDVTREYYINDAGNQIHNLALSLYARY 186 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245 +QA + D +PE Y G + + ++ + + L E K + ++ + ++ I Sbjct: 187 KQA-FGQDVTMPEDGYHGKDIIDIATKIKEIDGDKYLEMDEGKAIAFFRNKGTEYELQKI 245 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 +D L + D++ SE + D + I+ L GY YE + Sbjct: 246 KDILNEFRVSFDVWFSETSLYENDR--VVPTIEKLKAAGYTYE----------------E 287 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365 L F+ST GDD DR L+KSDGSYTY D+AY K +RG++ ++ ++G+DH GY+ Sbjct: 288 EGALWFKSTEFGDDKDRVLIKSDGSYTYLTPDIAYHLNKLDRGYEYLVDLLGADHHGYIN 347 Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425 R++A A+ Q+N+ + ++VR+ +G P+KMSKR G+ +T++ +++E+G D+ R+ Sbjct: 348 RMKAAIQALGYNADQLNIDIIQMVRMMNNGEPVKMSKRTGNAVTIKDLIEEIGVDATRYF 407 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF-DLFPRNV 484 + + + DFD K +S ENPV+Y QYA+AR SI QA ++D+ D + V Sbjct: 408 FVSKAANTPFDFDIGLAKSKSNENPVYYAQYAHARMCSIKAQAAK--ANIDYSDKYDLLV 465 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 P+ E++L+ H+ E+ VI ++ I + P+K+ Y+ LA +FH ++ Sbjct: 466 NPK-------EIELVKHINEFRNVIIDSAINRTPHKITNYVQRLAQLFHSFYN------E 512 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +N +L+ RL LV A + + LN+IGV +P +M Sbjct: 513 CYVIDEDNLELSGQRLALVEATRITMANALNLIGVSAPEKM 553 >gi|328952027|ref|YP_004369361.1| Arginyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109] gi|328452351|gb|AEB08180.1| Arginyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109] Length = 556 Score = 363 bits (933), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 204/556 (36%), Positives = 315/556 (56%), Gaps = 37/556 (6%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFINLY 92 ++ P+ HG +TNAA++L++ + P +AELI + P + V IAG GFIN + Sbjct: 34 VDVPKLAEHGDFATNAALLLAKSVRRAPRRVAELIRDNLNPPPGMLARVEIAGPGFINFF 93 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L +Y ++L I +G YG++ +G G V +EFVSANPTGP+HVGH R A +GD LA+ Sbjct: 94 LEGTYWLQVLDDIASAGGTYGQSTMGAGKSVQVEFVSANPTGPLHVGHGRGAALGDALAN 153 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 +++ +G+ V REYYIND G Q+ TL LS+ R ++ L PE Y G Y+K + ++ Sbjct: 154 ILSATGHRVEREYYINDIGLQMQTLGLSLLLRVKE-LQGEPVSFPENCYQGDYIKVLARQ 212 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 +++ L P+ L Y+ +A++ IR DL + D + SE + Sbjct: 213 YLEQHGPISLEEPDAAALEAGGRYAGEAILAGIRQDLADFGVHFDHWFSETRLFQ--DHD 270 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + L +GY+YE L F++T GD+ DR + + +G+ T Sbjct: 271 LDHAFAALQERGYLYEA----------------DGALWFKATAFGDEKDRVVRRQNGATT 314 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 YFA+D+ Y K++RGF +I + G+DH GYV RL+AV A+ ++ +LL +LV L Sbjct: 315 YFASDIGYHWQKFQRGFHQVIDIWGADHHGYVPRLKAVVQALGIPAERLTILLVQLVSLL 374 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 R+G P+ M+ R G F+TLR V+DEVG D+ RF+ L R+ L+FD K+QS ENPV+ Sbjct: 375 REGEPVAMTTRGGTFVTLREVMDEVGKDAARFIFLSRRADAHLEFDLELAKQQSNENPVY 434 Query: 453 YVQYAYARCRSIFR--QAKDIFPDLDFDL-FPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 YVQYA+AR S+FR Q K + + D R +P+ E+ L+ LA YP V+ Sbjct: 435 YVQYAHARLASVFRLAQEKGLAGEADQSANLTRLTLPE-------EITLLKLLATYPEVV 487 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 E A EP+++ ++L +LA HG++ R RF+ +++ L+ RL+LV + +I Sbjct: 488 EAAAFHLEPHRITYFLTELAGQLHGYYY------RHRFI-SDDADLSRARLRLVRGIKTI 540 Query: 570 INSGLNIIGVESPNEM 585 + GL ++GVE+P M Sbjct: 541 LAHGLGLLGVEAPENM 556 >gi|217963335|ref|YP_002349013.1| arginyl-tRNA synthetase [Listeria monocytogenes HCC23] gi|254782969|sp|B8DBE8|SYR_LISMH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|217332605|gb|ACK38399.1| arginyl-tRNA synthetase [Listeria monocytogenes HCC23] gi|307572087|emb|CAR85266.1| argS [Listeria monocytogenes L99] Length = 556 Score = 363 bits (932), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 213/569 (37%), Positives = 317/569 (55%), Gaps = 40/569 (7%) Query: 22 IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80 + +E+ + I++E P+D HG STN AM L+R P IAE IV +K D + Sbjct: 23 VGLEEAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPELKKDNKLIKE 82 Query: 81 VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140 V IAG GFIN YL +YL ++ I+ +YG + GKG K IEFVSANPTG +H+GH Sbjct: 83 VEIAGPGFINFYLDNAYLTDLVPVILTEDKQYGESDFGKGEKFQIEFVSANPTGDLHLGH 142 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R A +GD+LA++M +G++V+REYYINDAG QIN L LS RY +AL DS+ PE Sbjct: 143 ARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLVLSAEARYFEAL-GLDSEFPEDG 201 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G + +GK+LA KY + ++ EE+ + + ++ +R DL+ + D + Sbjct: 202 YRGADIISLGKDLAAKYGDKYVHTSEEERRSVFRVDALAFETGKLRADLEEFRVSFDEWF 261 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE + + + + ++ L GY+YE D L R+T DD Sbjct: 262 SETSLY--EENKVLPALERLRENGYIYE---------------QDGATWL-RTTDFEDDK 303 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR L+KSDGSYTYF D+AY K ERGFD +I + G+DH GY+ R+ A A+ Q Sbjct: 304 DRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGADHHGYIPRMRAAIEALGYSPNQ 363 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + V + +LV L+ DG+ +KMSKR G +T+R +++EVG D+ R+ R + ++FD Sbjct: 364 LEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVGLDATRYFFAMRSSDTHMNFDMS 423 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSEL 496 K S +NPV+YVQYA+AR SI R K ++ D D L + E+E+D Sbjct: 424 LAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKDADMSL-----LQTEAEYD---- 474 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 L+ L E+ V+ A + P+++ YL DLAS FH ++ + + +N ++T Sbjct: 475 -LLKVLGEFADVVAEAATKRAPHRIVRYLNDLASAFHRFYNSN------KVLDMDNLEVT 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L+ + +GL ++GV +P +M Sbjct: 528 KARLALIKTAQITLRNGLTLLGVSAPEKM 556 >gi|56965653|ref|YP_177387.1| arginyl-tRNA synthetase [Bacillus clausii KSM-K16] gi|81364951|sp|Q5WB34|SYR_BACSK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|56911899|dbj|BAD66426.1| arginyl-tRNA synthetase [Bacillus clausii KSM-K16] Length = 556 Score = 363 bits (932), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 207/557 (37%), Positives = 310/557 (55%), Gaps = 36/557 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFIN 90 +++E P+D AHG +TN AM L+R P IAE +VA + ++ + IAG GFIN Sbjct: 33 VLLEAPKDKAHGDFATNIAMQLARIAKKAPRAIAEELVANFDRKQAGIEKIEIAGPGFIN 92 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +L YLR+++ ++ +YG + +G+G KV IEFVSANPTG +H+GH R A VGDT+ Sbjct: 93 FFLDNGYLRELIPQVLTEKDDYGSSDVGQGEKVLIEFVSANPTGDLHLGHARGAAVGDTI 152 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A++M +GY+V+REYYINDAG QI LA S+ RY Q L D +PE Y G + + Sbjct: 153 ANIMDKAGYKVSREYYINDAGNQIENLAASLNARYLQVL-GEDQPMPEDGYHGQDIIDIA 211 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K+L D+ + E++ L ++DY ++ ++ I+ DL A ++ D + SE Sbjct: 212 KQLVDEAGDQYRQLDEKERLAFMRDYGLKKELEKIKQDLNAYRVEFDKWFSET------- 264 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 +L G V G+ T + D RST GDD DR L+K DG+ Sbjct: 265 --------SLYESGQVERGLQVLKDKNETYEKD---GATWLRSTAYGDDKDRVLVKQDGT 313 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTY D++Y K++RG D +I V+G+DH GY+ R+ A A+ A+ NV + ++V Sbjct: 314 YTYLTPDISYHLDKFDRGHDRLIDVLGADHHGYIPRMRAAIQALGYDPARFNVQIIQMVS 373 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L++ G +KMSKR G +TLR +++EVG D+ R+ R LDFD +S ENP Sbjct: 374 LFQGGEKVKMSKRTGKAVTLRELMEEVGVDATRYFFAMRSPDTHLDFDMDLAVSKSNENP 433 Query: 451 VFYVQYAYARCRSIFRQAKDI-FP-DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 V+Y+QYA+AR SI RQ +++ P + DL P I E E+ +L+ + E+P Sbjct: 434 VYYIQYAHARVCSILRQGEELGIPYSANTDLSP---IASEKEY-----ELLKAIGEFPGA 485 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 + A Q P ++A Y YDLA H ++ R + N+ L+ RL L+ A Sbjct: 486 VAEAATKQIPQRIANYAYDLAQALHSFYN------VTRVIDTENKDLSAARLALMKATQM 539 Query: 569 IINSGLNIIGVESPNEM 585 I + L ++GVE+P +M Sbjct: 540 TIKNALALLGVEAPEKM 556 >gi|228994078|ref|ZP_04153978.1| Arginyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442] gi|229000147|ref|ZP_04159716.1| Arginyl-tRNA synthetase [Bacillus mycoides Rock3-17] gi|229007668|ref|ZP_04165260.1| Arginyl-tRNA synthetase [Bacillus mycoides Rock1-4] gi|228753536|gb|EEM02982.1| Arginyl-tRNA synthetase [Bacillus mycoides Rock1-4] gi|228759479|gb|EEM08456.1| Arginyl-tRNA synthetase [Bacillus mycoides Rock3-17] gi|228765530|gb|EEM14184.1| Arginyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442] Length = 556 Score = 363 bits (932), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 201/569 (35%), Positives = 322/569 (56%), Gaps = 33/569 (5%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDP 76 + ++ E++I + +V+E P+D HG STN AM L+R P IAE ++A K Sbjct: 20 LKAELATEEQIPN-VVLESPKDKTHGDFSTNMAMQLARVAKKAPRMIAEELIANFDKAKA 78 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG GFIN Y+ SYL ++ IV +G YG GKG KV +EFVSANPTG + Sbjct: 79 SIEKIEIAGPGFINFYMDNSYLTDLIPVIVTAGTNYGETNTGKGEKVQVEFVSANPTGDL 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LALSV RY QAL + ++ Sbjct: 139 HLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLALSVEARYMQAL-GLEKEM 197 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE Y G + +G+ LA+++ E++ ++Y ++ + ++ DL++ ++ Sbjct: 198 PEDGYHGADIIGIGQRLAEEFGDRYAKADEKESYEFYREYGLKYELAKLQKDLESFRVKF 257 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + L + ++E + FRS Sbjct: 258 DVWFSETSLYKN--GKIDQALAVLKERDEIFE----------------EDGATWFRSMTY 299 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+DH GY+ R++A A+ Sbjct: 300 GDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGADHHGYIPRMKAAIQALGY 359 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + V + ++V+LY++G +KMSKR G +TLR +++EVG D++R+ R LD Sbjct: 360 DKETLEVEIIQMVQLYQNGEKVKMSKRTGKAVTLRELMEEVGVDAMRYFFAMRSGDSHLD 419 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y QYA+AR SI RQ +++ D+ + ++ E E D Sbjct: 420 FDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLTAGGDINYK-LVASEKEVD---- 474 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 L+ L E+P + A + P+++ Y ++LA+ H ++ + + +N +L+ Sbjct: 475 -LLKKLGEFPAAVAEAAQKRLPHRITNYAFELAAALHSFYNAE------KVLNPDNLELS 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R L+ AV + + L ++GV +P +M Sbjct: 528 KARYDLMRAVRITLQNALALVGVSAPEKM 556 >gi|46908732|ref|YP_015121.1| arginyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. F2365] gi|254826340|ref|ZP_05231341.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J1-194] gi|254854387|ref|ZP_05243735.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL R2-503] gi|255519904|ref|ZP_05387141.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J1-175] gi|300766060|ref|ZP_07076028.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL N1-017] gi|67461793|sp|Q71WL8|SYR_LISMF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|46882004|gb|AAT05298.1| arginyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. F2365] gi|258607786|gb|EEW20394.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL R2-503] gi|293595581|gb|EFG03342.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J1-194] gi|300513206|gb|EFK40285.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL N1-017] Length = 556 Score = 363 bits (931), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 213/569 (37%), Positives = 317/569 (55%), Gaps = 40/569 (7%) Query: 22 IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80 + +E+ + I++E P+D HG STN AM L+R P IAE IV +K D + Sbjct: 23 VGLEEAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPELKKDNKLIKE 82 Query: 81 VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140 V IAG GFIN YL +YL ++ I+ +YG + GKG K IEFVSANPTG +H+GH Sbjct: 83 VEIAGPGFINFYLDNAYLTDLVPVILTEDKQYGESDFGKGEKFQIEFVSANPTGDLHLGH 142 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R A +GD+LA++M +G++V+REYYINDAG QIN L LS RY +AL DS+ PE Sbjct: 143 ARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLVLSAEARYFEAL-GLDSEFPEDG 201 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G + +GK+LA KY + ++ EE+ + + ++ +R DL+ + D + Sbjct: 202 YRGADIISLGKDLAAKYGDKYVHTSEEERRSVFRVDALAFETGKLRADLEEFRVSFDEWF 261 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE + + + + ++ L GY+YE D L R+T DD Sbjct: 262 SETSLY--EENKVLPALERLRENGYIYE---------------QDGATWL-RTTDFEDDK 303 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR L+KSDGSYTYF D+AY K ERGFD +I + G+DH GY+ R+ A A+ Q Sbjct: 304 DRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGADHHGYIPRMRAAIEALGYSPNQ 363 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + V + +LV L+ DG+ +KMSKR G +T+R +++EVG D+ R+ R + ++FD Sbjct: 364 LEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVGLDATRYFFAMRSSDTHMNFDMS 423 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSEL 496 K S +NPV+YVQYA+AR SI R K ++ D D L + E+E+D Sbjct: 424 LAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKDADMSL-----LQTEAEYD---- 474 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 L+ L E+ V+ A + P+++ YL DLAS FH ++ + + +N ++T Sbjct: 475 -LLKVLGEFADVVAEAATKRAPHRIVRYLNDLASSFHRFYNSN------KVLDMDNLEVT 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L+ + +GL ++GV +P +M Sbjct: 528 KARLALIKTAQITLRNGLTLLGVSAPEKM 556 >gi|323490872|ref|ZP_08096070.1| arginyl-tRNA synthetase [Planococcus donghaensis MPA1U2] gi|323395480|gb|EGA88328.1| arginyl-tRNA synthetase [Planococcus donghaensis MPA1U2] Length = 553 Score = 363 bits (931), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 196/555 (35%), Positives = 318/555 (57%), Gaps = 33/555 (5%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFIN 90 + +E PRD +G +TN AM L+R P IAE IVA + D ++ +V IAG GFIN Sbjct: 31 VQLESPRDKTNGDYATNIAMQLTRLAKKPPRAIAEAIVANLDKDAANIQTVDIAGPGFIN 90 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + + YL+ ++ +++ ++YGR+ G ++ +EFVSANPTG +H+GH R + VGD+L Sbjct: 91 ITIKKDYLQDVVKTVLEQKVDYGRSTAGDNERIQVEFVSANPTGDLHLGHARGSSVGDSL 150 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +++ +GY+V+REYYINDAG QIN LALS+ RY +AL DS +PE Y G +K + Sbjct: 151 CNILDLAGYDVSREYYINDAGNQINNLALSIEARYFEALGKGDS-MPEDGYRGQDIKDIA 209 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 + L ++ + ++ E+ +++ ++ + ++ DL ++ D++ E ++ Sbjct: 210 EALVQEHGDKFVSMTHEERFETFREHGLKVELAKLQQDLADFRVEFDVWYPESSLYKN-- 267 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I + + L G+VYE + FRST GDD DR L+K+DGS Sbjct: 268 GKIDEALAKLRENGHVYE----------------EDGATWFRSTTFGDDKDRVLIKNDGS 311 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTY D+AY + K +RGF +I V G+DH GY+ R++A A+ + + V + ++V+ Sbjct: 312 YTYLMPDIAYHEDKLQRGFGKLINVWGADHHGYIPRMKAAIEALGYDRDTLEVSIIQMVQ 371 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 LY+DG +KMSKR G +T+R +V+ VG D+VR+ R +DFD QS ENP Sbjct: 372 LYKDGEKMKMSKRTGKAVTMRELVELVGLDAVRYFFAMRSGDSHMDFDLDLAVSQSNENP 431 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+Y QY +AR SI RQA++ L N++ E E D ++ + ++P+VI Sbjct: 432 VYYSQYGHARISSILRQAEE--QGLLASEEHLNLLTSEKEID-----VLKKIGDFPQVIA 484 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A + P+++ Y+ +LAS FH ++ + + A+N ++T RL L+ AV + + Sbjct: 485 DAAKQRAPHRITTYIQELASNFHSFYNAN------KVLDASNVEMTSARLALITAVKTTL 538 Query: 571 NSGLNIIGVESPNEM 585 + L +GVE+P +M Sbjct: 539 ANALKTVGVEAPEKM 553 >gi|254993097|ref|ZP_05275287.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J2-064] Length = 556 Score = 362 bits (930), Expect = 7e-98, Method: Compositional matrix adjust. Identities = 213/569 (37%), Positives = 313/569 (55%), Gaps = 40/569 (7%) Query: 22 IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80 + +E+ + I++E P+D HG STN AM L+R P IAE IV +K D + Sbjct: 23 VGLEEAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPELKKDNKLIKE 82 Query: 81 VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140 V IAG GFIN YL +YL ++ I+ +YG + GKG K IEFVSANPTG +H+GH Sbjct: 83 VEIAGPGFINFYLDNAYLTDLVPVILTEDKQYGESDFGKGEKFQIEFVSANPTGDLHLGH 142 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R A +GD+LA++M +G++V+REYYINDAG QIN L LS RY +AL DS+ PE Sbjct: 143 ARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLVLSAEARYFEAL-GLDSEFPEDG 201 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G + +GK+LA KY + ++ EE+ + R DL+ + D + Sbjct: 202 YRGADIISLGKDLAAKYGDKYVHTSEEERRSVFXXXXXXXXXXXXRADLEEFRVSFDEWF 261 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE + + + + ++ L GY+YE D L R+T DD Sbjct: 262 SETSLY--EENKVLPALERLRENGYIYE---------------QDGATWL-RTTDFEDDK 303 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR L+KSDGSYTYF D+AY K ERGFD +I + G+DH GY+ R+ A A+ Q Sbjct: 304 DRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGADHHGYIPRMRAAIEALGYSPNQ 363 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + V + +LV L+ DG+ +KMSKR G +T+R +++EVG D+ R+ R + ++FD Sbjct: 364 LEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVGLDATRYFFAMRSSDTHMNFDMS 423 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSEL 496 K S +NPV+YVQYA+AR SI R K ++ D D L + E+E+D Sbjct: 424 LAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKDADMSL-----LQTEAEYD---- 474 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 L+ L E+ V+ A + P+++ YL DLAS FH ++ + + +N ++T Sbjct: 475 -LLKVLGEFADVVAEAATKRAPHRIVRYLNDLASSFHRFYNSN------KVLDMDNLEVT 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L+ + +GL ++GV +P +M Sbjct: 528 KARLALIKTAQITLRNGLTLLGVSAPEKM 556 >gi|290892723|ref|ZP_06555715.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J2-071] gi|290557783|gb|EFD91305.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J2-071] Length = 556 Score = 362 bits (930), Expect = 7e-98, Method: Compositional matrix adjust. Identities = 213/569 (37%), Positives = 317/569 (55%), Gaps = 40/569 (7%) Query: 22 IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80 + +E+ + I++E P+D HG STN AM L+R P IAE IV +K D + Sbjct: 23 VGLEEAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPELKKDNKLIKE 82 Query: 81 VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140 V IAG GFIN YL +YL ++ I+ +YG + GKG K IEFVSANPTG +H+GH Sbjct: 83 VEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFGKGEKFQIEFVSANPTGDLHLGH 142 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R A +GD+LA++M +G++V+REYYINDAG QIN L LS RY +AL DS+ PE Sbjct: 143 ARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLVLSAEARYFEAL-GLDSEFPEDG 201 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G + +GK+LA KY + ++ EE+ + + ++ +R DL+ + D + Sbjct: 202 YRGADIISLGKDLAAKYGDKYVHTSEEERRSVFRVDALAFETGKLRADLEEFRVSFDEWF 261 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE + + + + ++ L GY+YE D L R+T DD Sbjct: 262 SETSLY--EENKVLPALERLRENGYIYE---------------QDGATWL-RTTDFEDDK 303 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR L+KSDGSYTYF D+AY K ERGFD +I + G+DH GY+ R+ A A+ Q Sbjct: 304 DRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGADHHGYIPRMRAAIEALGYSPNQ 363 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + V + +LV L+ DG+ +KMSKR G +T+R +++EVG D+ R+ R + ++FD Sbjct: 364 LEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVGLDATRYFFAMRSSDTHMNFDMS 423 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSEL 496 K S +NPV+YVQYA+AR SI R K ++ D D L + E+E+D Sbjct: 424 LAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKDADMSL-----LQTEAEYD---- 474 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 L+ L E+ V+ A + P+++ YL DLAS FH ++ + + +N ++T Sbjct: 475 -LLKVLGEFADVVAEAATKRAPHRIVRYLNDLASAFHRFYNSN------KVLDMDNLEVT 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L+ + +GL ++GV +P +M Sbjct: 528 KARLALIKTAQITLRNGLTLLGVSAPEKM 556 >gi|47093569|ref|ZP_00231328.1| arginyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858] gi|226225108|ref|YP_002759215.1| arginyl tRNA synthetase [Listeria monocytogenes Clip81459] gi|259511650|sp|C1KYX7|SYR_LISMC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|47018040|gb|EAL08814.1| arginyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858] gi|225877570|emb|CAS06284.1| arginyl tRNA synthetase [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|328465162|gb|EGF36430.1| arginyl-tRNA synthetase [Listeria monocytogenes 1816] Length = 556 Score = 362 bits (930), Expect = 7e-98, Method: Compositional matrix adjust. Identities = 213/569 (37%), Positives = 317/569 (55%), Gaps = 40/569 (7%) Query: 22 IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80 + +E+ + I++E P+D HG STN AM L+R P IAE IV +K D + Sbjct: 23 VGLEEAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPELKKDNKLIKE 82 Query: 81 VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140 V IAG GFIN YL +YL ++ I+ +YG + GKG K IEFVSANPTG +H+GH Sbjct: 83 VEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFGKGEKFQIEFVSANPTGDLHLGH 142 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R A +GD+LA++M +G++V+REYYINDAG QIN L LS RY +AL DS+ PE Sbjct: 143 ARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLVLSAEARYFEAL-GLDSEFPEDG 201 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G + +GK+LA KY + ++ EE+ + + ++ +R DL+ + D + Sbjct: 202 YRGADIISLGKDLAAKYGDKYVHTSEEERRSVFRVDALAFETGKLRADLEEFRVSFDEWF 261 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE + + + + ++ L GY+YE D L R+T DD Sbjct: 262 SETSLY--EENKVLPALERLRENGYIYE---------------QDGATWL-RTTDFEDDK 303 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR L+KSDGSYTYF D+AY K ERGFD +I + G+DH GY+ R+ A A+ Q Sbjct: 304 DRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGADHHGYIPRMRAAIEALGYSPNQ 363 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + V + +LV L+ DG+ +KMSKR G +T+R +++EVG D+ R+ R + ++FD Sbjct: 364 LEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVGLDATRYFFAMRSSDTHMNFDMS 423 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSEL 496 K S +NPV+YVQYA+AR SI R K ++ D D L + E+E+D Sbjct: 424 LAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKDADMSL-----LQTEAEYD---- 474 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 L+ L E+ V+ A + P+++ YL DLAS FH ++ + + +N ++T Sbjct: 475 -LLKVLGEFADVVAEAATKRAPHRIVRYLNDLASSFHRFYNSN------KVLDMDNLEVT 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L+ + +GL ++GV +P +M Sbjct: 528 KARLALIKTAQITLRNGLTLLGVSAPEKM 556 >gi|254932197|ref|ZP_05265556.1| arginyl-tRNA synthetase [Listeria monocytogenes HPB2262] gi|293583753|gb|EFF95785.1| arginyl-tRNA synthetase [Listeria monocytogenes HPB2262] gi|328471050|gb|EGF41959.1| arginyl-tRNA synthetase [Listeria monocytogenes 220] gi|332312990|gb|EGJ26085.1| Arginyl-tRNA synthetase [Listeria monocytogenes str. Scott A] Length = 556 Score = 362 bits (930), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 213/569 (37%), Positives = 317/569 (55%), Gaps = 40/569 (7%) Query: 22 IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80 + +E+ + I++E P+D HG STN AM L+R P IAE IV +K D + Sbjct: 23 VGLEEAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPELKKDNKLIKE 82 Query: 81 VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140 V IAG GFIN YL +YL ++ I+ +YG + GKG K IEFVSANPTG +H+GH Sbjct: 83 VEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFGKGEKFQIEFVSANPTGDLHLGH 142 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R A +GD+LA++M +G++V+REYYINDAG QIN L LS RY +AL DS+ PE Sbjct: 143 ARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLVLSAEARYFEAL-GLDSEFPEDG 201 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G + +GK+LA KY + ++ EE+ + + ++ +R DL+ + D + Sbjct: 202 YRGADIISLGKDLAAKYGDKYVHTSEEERRSVFRVDALAFETGKLRADLEEFRVSFDEWF 261 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE + + + + ++ L GY+YE D L R+T DD Sbjct: 262 SETSLY--EENKVLPALERLRENGYIYE---------------QDGATWL-RTTDFEDDK 303 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR L+KSDGSYTYF D+AY K ERGFD +I + G+DH GY+ R+ A A+ Q Sbjct: 304 DRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGADHHGYIPRMRAAIEALGYSPNQ 363 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + V + +LV L+ DG+ +KMSKR G +T+R +++EVG D+ R+ R + ++FD Sbjct: 364 LEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVGLDATRYFFAMRSSDTHMNFDMS 423 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSEL 496 K S +NPV+YVQYA+AR SI R K ++ D D L + E+E+D Sbjct: 424 LAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKDADMSL-----LQTEAEYD---- 474 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 L+ L E+ V+ A + P+++ YL DLAS FH ++ + + +N ++T Sbjct: 475 -LLKVLGEFADVVAEAATKRAPHRIVRYLNDLASSFHRFYNSN------KVLDMDNLEVT 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L+ + +GL ++GV +P +M Sbjct: 528 KARLALIKTAQITLRNGLTLLGVSAPEKM 556 >gi|289435829|ref|YP_003465701.1| hypothetical protein lse_2468 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172073|emb|CBH28619.1| argS [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 556 Score = 362 bits (929), Expect = 9e-98, Method: Compositional matrix adjust. Identities = 212/569 (37%), Positives = 316/569 (55%), Gaps = 40/569 (7%) Query: 22 IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80 + +E + I++E P+D HG STN AM L+R P IAE IV +K D + Sbjct: 23 VGLEAAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPELKKDNKLIKE 82 Query: 81 VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140 V IAG GFIN YL +YL ++ I+ YG++ GKG K IEFVSANPTG +H+GH Sbjct: 83 VEIAGPGFINFYLDNAYLTDLVPVILTEDDAYGKSDFGKGEKFQIEFVSANPTGDLHLGH 142 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R A +GD+LA++M +GY V+REYYINDAG QIN L LS RY +AL ++D PE Sbjct: 143 ARGAAIGDSLANIMTMAGYNVSREYYINDAGNQINNLVLSAEARYFEAL-GLEADFPEDG 201 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G + +GK+LA KY + ++ EE+ + + ++ +R DL+ + D + Sbjct: 202 YRGADIISLGKDLAAKYGDKYVSTSEEERRSVFRVDALDFETDKLRADLEEFRVSFDEWF 261 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE + + + + ++ L GY+YE D L R+T DD Sbjct: 262 SETSLY--EENKVLPALERLRENGYIYE---------------QDGATWL-RTTDFEDDK 303 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR L+KSDGSYTYF D+AY K ERGFD +I + G+DH GY+ R+ A A+ Q Sbjct: 304 DRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGADHHGYIPRMRAAIEALGYSPNQ 363 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + V + +LV L+ DG+ +KMSKR G +T+R +++EVG D+ R+ R + ++FD Sbjct: 364 LEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVGLDATRYFFAMRSSDTHMNFDMS 423 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSEL 496 K S +NPV+YVQYA+AR SI R K D+ + D L + E+E+D Sbjct: 424 LAKSTSNDNPVYYVQYAHARISSILRAGKEQNLDVSKEADMSL-----LQTEAEYD---- 474 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 L+ L E+ V+ A + + P+++ YL DLA+ FH ++ + + +N ++T Sbjct: 475 -LLKVLGEFADVVAEAAVKRAPHRIVRYLNDLAAAFHRFYNSN------KVLDMDNLEVT 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L+ + +GL ++GV +P +M Sbjct: 528 KARLALIKTAQITLRNGLTLLGVSAPEKM 556 >gi|16801767|ref|NP_472035.1| arginyl-tRNA synthetase [Listeria innocua Clip11262] gi|21542253|sp|Q927T2|SYR_LISIN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|16415242|emb|CAC97932.1| arginyl tRNA synthetase [Listeria innocua Clip11262] Length = 556 Score = 362 bits (929), Expect = 9e-98, Method: Compositional matrix adjust. Identities = 210/565 (37%), Positives = 319/565 (56%), Gaps = 32/565 (5%) Query: 22 IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80 + +E+ + I++E P+D HG STN AM L+R P IAE IV +K D + Sbjct: 23 VGLEETEVPEILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPELKKDTKLIKE 82 Query: 81 VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140 V IAG GFIN YL +YL ++ I+ +YG + GKG K IEFVSANPTG +H+GH Sbjct: 83 VEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFGKGEKFQIEFVSANPTGDLHLGH 142 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R A +GD+LA++M +G++V+REYYINDAG QIN L LS RY +AL +S+ PE Sbjct: 143 ARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLVLSAEARYFEAL-GLESEFPEDG 201 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G + +GK+LA KY + +N EE+ + + ++ +R DL+ + D + Sbjct: 202 YRGSDIIALGKDLAAKYGDKYVNASEEERRSVFRVDALAFETGKLRADLEEFRVSFDEWF 261 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE + + + + ++ L GY+YE D L R+T DD Sbjct: 262 SETSLY--EENKVLPALERLRENGYIYE---------------QDGATWL-RTTDFEDDK 303 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR L+KSDGSYTYF D+AY K ERGFD +I + G+DH GY+ R+ A A+ Q Sbjct: 304 DRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGADHHGYIPRMRAAIEALGYSPNQ 363 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + V + +LV L+ DG+ +KMSKR G +T+R +++EVG D+ R+ R + ++FD Sbjct: 364 LEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVGLDATRYFFAMRSSDTHMNFDMS 423 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500 K S +NPV+YVQYA+AR SI R K+ ++ D +++ E+E+D L+ Sbjct: 424 LAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVSKDA-NMSLLETEAEYD-----LLK 477 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 L E+ V+ A + + P+++ YL DLA+ FH ++ + + +N ++T RL Sbjct: 478 VLGEFADVVAEAAVKRAPHRIVRYLNDLATAFHRFYNSN------KVLDMDNLEVTKARL 531 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 L+ + +GL ++GV +P +M Sbjct: 532 ALIKTAQITLRNGLTLLGVSAPEKM 556 >gi|116873927|ref|YP_850708.1| arginyl-tRNA synthetase [Listeria welshimeri serovar 6b str. SLCC5334] gi|123461434|sp|A0ALP7|SYR_LISW6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|116742805|emb|CAK21929.1| arginyl-tRNA synthetase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 556 Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 211/559 (37%), Positives = 313/559 (55%), Gaps = 40/559 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90 I++E P+D HG STN AM L+R P IAE IV +K D + V IAG GFIN Sbjct: 33 ILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPELKKDNKLIKEVEIAGPGFIN 92 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL +YL +++ I+ +YG + GKG K IEFVSANPTG +H+GH R A +GD+L Sbjct: 93 FYLDNAYLTELVPVILTEDHKYGESDFGKGEKFQIEFVSANPTGDLHLGHARGAAIGDSL 152 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A++M +G++V+REYYINDAG QIN L LS RY +AL +S+ PE Y G + +G Sbjct: 153 ANIMKMAGFDVSREYYINDAGNQINNLVLSAEARYFEAL-GLESEFPEDGYRGADIISLG 211 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K+LA KY + +N EE+ + + ++ +R DL+ + D + SE + + Sbjct: 212 KDLAAKYGDKYVNTSEEERRSVFRVDALAFETGKLRADLEEFRVSFDEWFSETSLY--EE 269 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + + ++ L GY+YE D L R+T DD DR L+KSDGS Sbjct: 270 NKVLPALERLRENGYIYE---------------QDGATWL-RTTDFEDDKDRVLIKSDGS 313 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTYF D+AY K ERGFD +I + G+DH GY+ R+ A A+ Q+ V + +LV Sbjct: 314 YTYFLPDIAYHLNKLERGFDVLIDIWGADHHGYIPRMRAAIEALGYSPNQLEVEIIQLVH 373 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L+ DG+ +KMSKR G +T+R +++EVG D+ R+ R + ++FD K S +NP Sbjct: 374 LFEDGVQVKMSKRTGKSVTMRDLIEEVGLDATRYFFAMRSSDTHMNFDMSLAKSTSNDNP 433 Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 V+YVQYA+AR SI R K ++ D D L + E+E+D L+ L E+ Sbjct: 434 VYYVQYAHARISSILRSGKEQGLEVTKDADMSL-----LQTEAEYD-----LLKVLGEFA 483 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 V+ A + P+++ YL DLA+ FH ++ + + +N ++T RL L+ Sbjct: 484 DVVAEAAAKRAPHRIVRYLNDLATAFHRFYNSN------KVLDMDNLEVTQARLSLIKTA 537 Query: 567 ASIINSGLNIIGVESPNEM 585 + +GL ++GV +P +M Sbjct: 538 QITLRNGLTLLGVSAPEKM 556 >gi|16804599|ref|NP_466084.1| arginyl-tRNA synthetase [Listeria monocytogenes EGD-e] gi|47097104|ref|ZP_00234673.1| arginyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854] gi|224500484|ref|ZP_03668833.1| arginyl-tRNA synthetase [Listeria monocytogenes Finland 1988] gi|224503648|ref|ZP_03671955.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL R2-561] gi|254829538|ref|ZP_05234225.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] gi|254900987|ref|ZP_05260911.1| arginyl-tRNA synthetase [Listeria monocytogenes J0161] gi|254913799|ref|ZP_05263811.1| arginyl-tRNA synthetase [Listeria monocytogenes J2818] gi|254938188|ref|ZP_05269885.1| arginyl-tRNA synthetase [Listeria monocytogenes F6900] gi|255025720|ref|ZP_05297706.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J2-003] gi|284802999|ref|YP_003414864.1| arginyl-tRNA synthetase [Listeria monocytogenes 08-5578] gi|284996140|ref|YP_003417908.1| arginyl-tRNA synthetase [Listeria monocytogenes 08-5923] gi|21542250|sp|Q8Y493|SYR_LISMO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|16412049|emb|CAD00639.1| arginyl tRNA synthetase [Listeria monocytogenes EGD-e] gi|47014509|gb|EAL05473.1| arginyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854] gi|258601953|gb|EEW15278.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] gi|258610800|gb|EEW23408.1| arginyl-tRNA synthetase [Listeria monocytogenes F6900] gi|284058561|gb|ADB69502.1| arginyl-tRNA synthetase [Listeria monocytogenes 08-5578] gi|284061607|gb|ADB72546.1| arginyl-tRNA synthetase [Listeria monocytogenes 08-5923] gi|293591816|gb|EFG00151.1| arginyl-tRNA synthetase [Listeria monocytogenes J2818] Length = 556 Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 213/569 (37%), Positives = 317/569 (55%), Gaps = 40/569 (7%) Query: 22 IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80 + +E+ + I++E P+D HG STN AM L+R P IAE IV +K D + Sbjct: 23 VGLEETEVPEILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPELKKDNKLIKE 82 Query: 81 VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140 V IAG GFIN YL +YL ++ I+ +YG + GKG K IEFVSANPTG +H+GH Sbjct: 83 VEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFGKGEKFQIEFVSANPTGDLHLGH 142 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R A +GD+LA++M +G++V+REYYINDAG QIN L LS RY +AL +S+ PE Sbjct: 143 ARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLVLSAEARYFEAL-GLESEFPEDG 201 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G + +GK+LA KY + ++ EE+ I + ++ +R DL+ + D + Sbjct: 202 YRGADIISLGKDLAAKYGDKYVHTSEEERRSIFRVDALAFETGKLRADLEEFRVSFDEWF 261 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE + + + + ++ L GY+YE D L R+T DD Sbjct: 262 SETSLY--EENKVLPALERLRENGYIYE---------------QDGATWL-RTTDFEDDK 303 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR L+KSDGSYTYF D+AY K ERGFD +I + G+DH GY+ R+ A A+ Q Sbjct: 304 DRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGADHHGYIPRMRAAIEALGYSPNQ 363 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + V + +LV L+ DG+ +KMSKR G +T+R +++EVG D+ R+ R + ++FD Sbjct: 364 LEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVGLDATRYFFAMRSSDTHMNFDMS 423 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSEL 496 K S +NPV+YVQYA+AR SI R K ++ D D L + E+E+D Sbjct: 424 LAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKDADMSL-----LQTEAEYD---- 474 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 L+ L E+ V+ A + P+++ YL DLAS FH ++ + + +N ++T Sbjct: 475 -LLKVLGEFADVVAEAAAKRAPHRIVRYLNDLASAFHRFYNSN------KVLDMDNLEVT 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L+ + +GL ++GV +P +M Sbjct: 528 KARLALIKTAQITLRNGLTLLGVSAPEKM 556 >gi|225848845|ref|YP_002729009.1| arginyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1] gi|225643540|gb|ACN98590.1| arginyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1] Length = 552 Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 208/557 (37%), Positives = 325/557 (58%), Gaps = 36/557 (6%) Query: 27 KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK 86 +I D+I +E P++ + G L+TN A +L++ L P IAE I + ++ DP V + Sbjct: 22 EIEDKIKVEPPKEESFGDLATNVAFLLTKHLKQKPQDIAEKIKSLLEKDPTFSKVEVLN- 80 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GFINL+LS SY ++ V G +G N K+NIE+VSANPTGP+H+GH R AVV Sbjct: 81 GFINLFLSDSYYHSVVKKAVEEGDSFGENKEKNRGKINIEYVSANPTGPLHLGHGRGAVV 140 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206 G+ L+++ ++ GY+V RE+YINDAG QI L SV+ R++Q + D PE Y G Y+ Sbjct: 141 GNLLSNMYSYIGYKVEREFYINDAGNQIKKLGQSVYARFRQ-IEEPDFPFPEDGYHGEYI 199 Query: 207 KHVGKELADKYSSELLN-FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 K + KE+ ++L+ EE + +Y+ ++ I++DLK +N+ DI+ SE Sbjct: 200 KDIAKEIYHYEREKILSMLSEEDAVEFCAEYAKNYLLDKIKEDLKLINVDFDIWTSEKSL 259 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 ++ + + L +G +YE L ++++ GD+ DR + Sbjct: 260 YQH--GKVDQALKFLEEKGMIYE----------------KDGALWLKTSLYGDEKDRVIK 301 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 KSDGSYTYFAAD+AY KYERG+D +I V G+DH GY RL+A A ++ INV+ Sbjct: 302 KSDGSYTYFAADIAYHYDKYERGYDFIINVWGADHHGYFPRLKAAVMAFGVREDWINVVF 361 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 +LV+L+++G +KMSKR+GDFITLR +V+EVG D+V + + + L+FD + Sbjct: 362 IQLVKLFKNGEEVKMSKRSGDFITLRELVEEVGKDAVIYFFASKDPNTHLNFDIDVALAK 421 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIF---PDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 S ENPV+YVQYA+AR S+FR+AK+ F P+ DF+ +++ QE E ++ L Sbjct: 422 SNENPVYYVQYAHARISSVFREAKERFNFDPEKDFEA-DLSLLTQE-----EEKSIMKFL 475 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 + P+ IE AT+ +EP+K+ Y+LAS H ++ +F+ + KL RL L Sbjct: 476 SNLPQEIEEATLKKEPHKITSLTYELASKLHKYYYQH------KFLIETDEKLMKARLYL 529 Query: 563 VHAVASIINSGLNIIGV 579 + A+ + + + ++G+ Sbjct: 530 LKAIRNALRTLFKLMGI 546 >gi|224370238|ref|YP_002604402.1| arginyl-tRNA synthetase [Desulfobacterium autotrophicum HRM2] gi|259511641|sp|C0QKZ8|SYR_DESAH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|223692955|gb|ACN16238.1| ArgS [Desulfobacterium autotrophicum HRM2] Length = 555 Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 202/552 (36%), Positives = 310/552 (56%), Gaps = 28/552 (5%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 IE PR AHG STN AM+ + + P IAE +++ + D ++ IAG GFIN +L Sbjct: 32 IEAPRHEAHGDFSTNFAMVSAATQKMAPRKIAEAVISCMDSDSVIEKTEIAGPGFINFFL 91 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + L IV +G + G G KV +EFVSANPTGP+HVGH R A VGD +A++ Sbjct: 92 ANRAWYPTLDRIVKEDDRFGSSDFGAGKKVQVEFVSANPTGPLHVGHARGAAVGDAVANI 151 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 ++F+G++V REYYIND+G QI TL LSV+ R Q L + + P Y G Y+K + +L Sbjct: 152 LSFAGFDVQREYYINDSGRQIRTLGLSVWLRLCQQL-GREVEFPTDCYQGDYIKEIAADL 210 Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273 K EL E + + I ++ Q ++ IR DL A +++D + SE+ + + Sbjct: 211 HGKMGRELSEKDEAEAVSICAKFAAQVILSGIRADLVAFGVEYDQWFSEESLYA--SGRV 268 Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333 + I+ + +YE D Q FR+ GD+ DR +++++G TY Sbjct: 269 QKAIEEFKARDVIYE---------------KDGAQW-FRTERYGDEKDRVVVRNNGITTY 312 Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393 FA+D+AY K++RGFD +I V G+DH GY+ R+ A A + Q +V+L +LV L R Sbjct: 313 FASDIAYHMEKFDRGFDRVIDVWGADHHGYINRINAAIDASGRQSDQFDVILVQLVNLLR 372 Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453 +G P+ MS R+G+F+TL+ +VDEVG D+ RF+ L R LDFD K+++ +NPV+Y Sbjct: 373 NGQPVAMSSRSGEFVTLKDIVDEVGKDAARFLFLSRSYDSGLDFDLEVAKQKTSDNPVYY 432 Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513 VQY +AR I +A + + + +E + E+ L+ LA +P +E + Sbjct: 433 VQYVHARIAGILMKA--VSEKVLNEAEKPGAGNRELLVEPEEINLLKILAAFPETVEKSA 490 Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573 P+ + YL LAS FHG+++ + V +R+L+ R+ LV AV ++I +G Sbjct: 491 ATLHPHVIFTYLMGLASAFHGYYNRHK-------VITPDRELSRGRISLVFAVKTVIRNG 543 Query: 574 LNIIGVESPNEM 585 LN++GV +P M Sbjct: 544 LNLLGVSAPERM 555 >gi|188996539|ref|YP_001930790.1| arginyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1] gi|188931606|gb|ACD66236.1| arginyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1] Length = 553 Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 214/560 (38%), Positives = 322/560 (57%), Gaps = 43/560 (7%) Query: 28 ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87 + D+I IE P++ G LSTNAA ILS+ L P +A + A + DP + V +AG G Sbjct: 23 VEDKIKIESPKEEKFGDLSTNAAFILSKNLNKKPFEVANQLKALFEKDPYFEKVEVAGGG 82 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FINL++S ++ +IL+ + E+G+ K NIE+VSANPTGP+H+GH R AVVG Sbjct: 83 FINLFISDAFYHQILNKAIEEKDEFGKAKEKNKGKTNIEYVSANPTGPLHLGHGRGAVVG 142 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 + L++L + GY+V RE+YINDAG QI L +SV+ R++Q + PE Y G Y+K Sbjct: 143 NILSNLYDYIGYKVEREFYINDAGNQIKKLGMSVYARFRQ-IEEPSYPFPEDGYHGEYIK 201 Query: 208 HVGKELADKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 + KEL ++L+F EE+ + +Y+ ++ I+ DLK + ++ DI+ SE H Sbjct: 202 DIAKELYHYEREKILSFLDEEEAIEFCAEYAKNFLLDEIKKDLKLIGVEFDIWYSER--H 259 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 + + + L +G +YE L ++++ GD+ DR + K Sbjct: 260 LYEHGKVEQALKFLESKGLIYE----------------KDGALWLKTSLYGDEKDRVIRK 303 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386 SDGSYTYFAAD+AY KY R +D +I V G+DH GY RL+A A K+ INVL Sbjct: 304 SDGSYTYFAADIAYHYDKYLRNYDFIINVWGADHHGYFPRLKAAIMAFGVKEDWINVLFI 363 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446 +LV+L+ +G +KMSKR+GDFITLR +V+EVG D+V + + + L+FD ++S Sbjct: 364 QLVKLFNNGEEVKMSKRSGDFITLRELVEEVGKDAVIYFFASKDPNTHLNFDIDIALKKS 423 Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES-EFDTS------ELQLI 499 ENPVFYVQYA+AR S+FR+A+ F N P+E E D S E L+ Sbjct: 424 NENPVFYVQYAHARISSVFREAQQRF----------NFNPEEDFEADLSLLKEDLERSLM 473 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 +++ P I +ATI +P+K+ Y+LAS H ++ + +F+ N+ KL R Sbjct: 474 KYISTIPDEIYDATIKNQPHKITNITYELASRLHKYYYYH------KFLIENDEKLMKAR 527 Query: 560 LQLVHAVASIINSGLNIIGV 579 L L+ AV +++ + I+G+ Sbjct: 528 LYLLKAVRNVLRALFKIMGI 547 >gi|163785199|ref|ZP_02179881.1| arginyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1] gi|159879532|gb|EDP73354.1| arginyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1] Length = 517 Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 202/550 (36%), Positives = 320/550 (58%), Gaps = 49/550 (8%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 IE P++ G S NAA +L++ L PL IA I ++ + + V +AG GFINL+L Sbjct: 5 IETPKEEKFGDFSINAAFLLTKYLKKKPLEIANQIKEILEKEDIFEKVEVAGAGFINLFL 64 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 S + + L VV G YG + K+N+EFVSANPTGP+H+GH R AVVG+ L+++ Sbjct: 65 STKFFQPFLHKAVVHGDRYGEKINKDKGKINVEFVSANPTGPLHLGHGRGAVVGNALSNI 124 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 +++SGYEV +E+YINDAG QI L S++ RY+Q + D PE Y G Y+K + K++ Sbjct: 125 LSYSGYEVVKEFYINDAGNQIRKLGESIYARYRQ-IEQPDFPFPEDGYHGNYIKEIAKDI 183 Query: 214 ADKYSSELLNFPEE----KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 ++L F +E +W+ +Y ++ I++DLK +N++ DI+ SE + ++ Sbjct: 184 YYHEREKVLTFLDESQAVEWMA---EYGKNILLDRIKEDLKLINVEFDIWFSEKELYK-- 238 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 ++++I+ L +G VYE L ++T+ GDD DR L KSDG Sbjct: 239 TGKVQEVINYLQEKGLVYE----------------KDGALWLKTTLYGDDKDRVLKKSDG 282 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 +YTYFA D+AY K++R + I + G+DH GY RL+A A+ + + VL +LV Sbjct: 283 TYTYFAGDIAYHYDKFKRSYKQAINIWGADHHGYFPRLKAAVMALGASENWLQVLFIQLV 342 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 +L+++G +KMSKRAG+FITLR +V EVG+D+V + L + ++ L+FD ++S EN Sbjct: 343 KLFKNGKEVKMSKRAGEFITLRDLVIEVGADAVIYFFLSKDSNTHLNFDIDLATKKSSEN 402 Query: 450 PVFYVQYAYARCRSIFRQAKD-------IFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 PVFYVQYA+AR S+FR+AK+ + D++ +L + +E L+ + Sbjct: 403 PVFYVQYAHARITSVFREAKEKLGIEANLIEDVNIELLK----------EKAEKDLMKKI 452 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 + P I N ++P+K+ YDLAS FH ++++ +F+ N+ +LT RL L Sbjct: 453 STIPEDIYNIAEQKQPHKITNLAYDLASKFHYYYNN------YKFLNENDEELTKARLYL 506 Query: 563 VHAVASIINS 572 + AV + + + Sbjct: 507 LRAVRNTLRT 516 >gi|313617044|gb|EFR89624.1| arginyl-tRNA synthetase [Listeria innocua FSL S4-378] Length = 556 Score = 361 bits (926), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 209/565 (36%), Positives = 319/565 (56%), Gaps = 32/565 (5%) Query: 22 IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80 + +E+ + I++E P+D HG STN AM L+R P IAE IV +K D + Sbjct: 23 VGLEETEVPEILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPELKKDSKLIKE 82 Query: 81 VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140 V IAG GFIN YL +YL ++ I+ +YG + GKG K IEFVSANPTG +H+GH Sbjct: 83 VEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFGKGEKFQIEFVSANPTGDLHLGH 142 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R A +GD+LA++M +G++V+REYYINDAG QIN L LS RY +AL +++ PE Sbjct: 143 ARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLVLSAEARYFEAL-GLEAEFPEDG 201 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G + +GK+LA KY + +N EE+ + + ++ +R DL+ + D + Sbjct: 202 YRGSDIIALGKDLAAKYGDKYVNASEEERRSVFRVDALAFETGKLRADLEEFRVSFDEWF 261 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE + + + + ++ L GY+YE D L R+T DD Sbjct: 262 SETSLY--EENKVLPALERLRENGYIYE---------------QDGATWL-RTTDFEDDK 303 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR L+KSDGSYTYF D+AY K ERGFD +I + G+DH GY+ R+ A A+ Q Sbjct: 304 DRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGADHHGYIPRMRAAIEALGYSPNQ 363 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + V + +LV L+ DG+ +KMSKR G +T+R +++EVG D+ R+ R + ++FD Sbjct: 364 LEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVGLDATRYFFAMRSSDTHMNFDMS 423 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500 K S +NPV+YVQYA+AR SI R K+ ++ D +++ E+E+D L+ Sbjct: 424 LAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVSKDA-NMSLLETEAEYD-----LLK 477 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 L E+ V+ A + + P+++ YL DLA+ FH ++ + + +N ++T RL Sbjct: 478 VLGEFADVVAEAAVKRAPHRIVRYLNDLATAFHRFYNSN------KVLDMDNLEVTKARL 531 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 L+ + +GL ++GV +P +M Sbjct: 532 ALIKTAQITLRNGLTLLGVSAPEKM 556 >gi|227824820|ref|ZP_03989652.1| arginyl-tRNA synthetase [Acidaminococcus sp. D21] gi|226905319|gb|EEH91237.1| arginyl-tRNA synthetase [Acidaminococcus sp. D21] Length = 552 Score = 360 bits (925), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 204/558 (36%), Positives = 308/558 (55%), Gaps = 41/558 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V P A G +TN A+ +R P IA+ +V + V+ + +AG GF+N Sbjct: 32 LVFTVPPQKAFGDFATNFALQAARNFHCPPRVIADAVVKYLDCSA-VEKMEVAGPGFLNF 90 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 YL +L + L+ I+ G YG G K+ IEFVSANPTGP+HVGH R A VG +LA Sbjct: 91 YLKSDWLYEGLARILEKGESYGNLPKKAGEKIQIEFVSANPTGPLHVGHGRGAAVGSSLA 150 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +LM +GY+VTREY INDAG Q++ LALSV RY + L+ + PE Y G + + Sbjct: 151 NLMLAAGYDVTREYLINDAGNQMHNLALSVNARYLE-LFGKEVSFPENGYHGEDIIVTAR 209 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 + +KY + L+ E + L + + + +R+DL+A N + D++ SE H D Sbjct: 210 RIKEKYGDKFLHMEETERLSAFQTLAKDEKLAALREDLEAFNCKFDVWFSEQSLH--DAG 267 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 I++ +D L ++ YVYE L FRST GDD DR +++ +G Sbjct: 268 KIKEAVDTLQKKDYVYE----------------KGGALWFRSTKFGDDKDRVVIRDNGVS 311 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 TYFAAD+AY + K++RGFD +I + G+DH GY+ R++A A+ + + +L+ ++V L Sbjct: 312 TYFAADIAYHQNKFQRGFDRIINLWGADHHGYITRVKAAMEALGYDPSHLEILILQMVSL 371 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 YR+G +KMSKR G +TL +++EVG+D+ R+ + R LDFD E S +NPV Sbjct: 372 YRNGELVKMSKRTGKAVTLNELIEEVGTDAARYFFIMRSMDSQLDFDLTLATEHSNDNPV 431 Query: 452 FYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 +YVQYA+AR SI +Q ++ + P D + V E+ LI L +Y Sbjct: 432 YYVQYAHARICSILKQMEEEHIALDPHCDLSVLGEPV----------EIDLIKKLGDYED 481 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 ++E A + P+K+A Y+Y+LA +FH ++ R V + KL RL L+ A Sbjct: 482 LVETAAAERAPHKIAHYVYELAGIFHSFYNQCR-------VLGVDPKLQQARLALIMATR 534 Query: 568 SIINSGLNIIGVESPNEM 585 + GL I+GV +P+ M Sbjct: 535 HTLRHGLMILGVSAPDHM 552 >gi|254831015|ref|ZP_05235670.1| arginyl-tRNA synthetase [Listeria monocytogenes 10403S] Length = 556 Score = 360 bits (925), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 211/569 (37%), Positives = 317/569 (55%), Gaps = 40/569 (7%) Query: 22 IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80 + +E+ + I++E P+D HG STN AM L+R P IAE IV +K D + Sbjct: 23 VGLEEAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPELKKDNKLIKE 82 Query: 81 VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140 V IAG GFIN YL +YL ++ I+ +YG + GKG K IEFVSANPTG +H+GH Sbjct: 83 VEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFGKGEKFQIEFVSANPTGDLHLGH 142 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R A +GD+LA++M +G++V+REYYINDAG QIN L LS RY +AL +S+ PE Sbjct: 143 ARGAAIGDSLANIMNMAGFDVSREYYINDAGNQINNLVLSAEARYFEAL-GLESEFPEDG 201 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G + +GK+LA KY + +N EE+ + + ++ +R DL+ + D + Sbjct: 202 YRGADIISLGKDLAAKYGDKYVNASEEERRSVFRVDALAFETGKLRADLEEFRVSFDEWF 261 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE + + + + ++ L GY+YE D L R+T DD Sbjct: 262 SETSLY--EENKVLPALERLRENGYIYE---------------QDGATWL-RTTDFEDDK 303 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR L+K+DGSYTYF D+AY K ERGFD +I + G+DH GY+ R+ A A+ Q Sbjct: 304 DRVLIKTDGSYTYFLPDIAYHLNKLERGFDVLIDIWGADHHGYIPRMRAAIEALGYSPNQ 363 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + V + +LV L+ DG+ +KMSKR G +T+R +++EVG D+ R+ R + ++FD Sbjct: 364 LEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVGLDATRYFFAMRSSDTHMNFDMS 423 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSEL 496 K S +NPV+YVQYA+AR SI R K ++ D D L + E+E+D Sbjct: 424 LAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKDADMSL-----LQTEAEYD---- 474 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 L+ L E+ V+ A + P+++ YL DLA+ FH ++ + + +N ++T Sbjct: 475 -LLKVLGEFADVVAEAAAKRAPHRIVRYLNDLATAFHRFYNSN------KVLDMDNLEVT 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L+ + +GL ++GV +P +M Sbjct: 528 KARLALIKTAQITLRNGLTLLGVSAPEKM 556 >gi|315283742|ref|ZP_07871832.1| arginyl-tRNA synthetase [Listeria marthii FSL S4-120] gi|313612612|gb|EFR86664.1| arginyl-tRNA synthetase [Listeria marthii FSL S4-120] Length = 556 Score = 360 bits (925), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 211/566 (37%), Positives = 320/566 (56%), Gaps = 34/566 (6%) Query: 22 IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80 + +E+ + I++E P+D HG STN AM L+R P IAE IV +K D + Sbjct: 23 VGLEETEVPEILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPELKKDNKLIKE 82 Query: 81 VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140 V IAG GFIN YL +YL ++ I+ +YG + GKG K IEFVSANPTG +H+GH Sbjct: 83 VEIAGPGFINFYLDNAYLTDLVPVILKEDEKYGESDFGKGEKFQIEFVSANPTGDLHLGH 142 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R A +GD+LA++M+ +G++V+REYYINDAG QIN L LS RY +AL +S+ PE Sbjct: 143 ARGAAIGDSLANIMSVAGFDVSREYYINDAGNQINNLVLSAEARYFEAL-GLESEFPEDG 201 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G + +GK+LA KY + +N EE+ + + ++ +R DL+ + D + Sbjct: 202 YRGADIISLGKDLAAKYGDKYVNASEEERRSVFRVDALAFETGKLRADLEEFRVSFDEWF 261 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE + + + + ++ L GY+YE D L R+T DD Sbjct: 262 SETSLY--EENKVLPALERLRENGYIYE---------------QDGATWL-RTTDFEDDK 303 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR L+KSDGSYTYF D+AY K ERGFD +I + G+DH GY+ R+ A A+ Q Sbjct: 304 DRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGADHHGYIPRMRAAIEALGYSPNQ 363 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + V + +LV L+ DG+ +KMSKR G +T+R +++EVG D+ R+ R + ++FD Sbjct: 364 LEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVGLDATRYFFAMRSSDTHMNFDMS 423 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF-DLFPRNVIPQESEFDTSELQLI 499 K S +NPV+YVQYA+AR SI R K+ DL+ + +++ E+E+D L+ Sbjct: 424 LAKSTSNDNPVYYVQYAHARISSILRSGKE--QDLEVTEAADMSLLQTEAEYD-----LL 476 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 L E+ V+ A + P+++ YL DLA+ FH ++ + + +N ++T R Sbjct: 477 KVLGEFADVVAEAAAKRAPHRIVRYLNDLAAAFHRFYNSN------KVLDMDNLEVTKAR 530 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L+ + +GL ++GV +P +M Sbjct: 531 LALIKTAQITLRNGLTLLGVSAPEKM 556 >gi|317485261|ref|ZP_07944142.1| arginyl-tRNA synthetase [Bilophila wadsworthia 3_1_6] gi|316923552|gb|EFV44757.1| arginyl-tRNA synthetase [Bilophila wadsworthia 3_1_6] Length = 551 Score = 360 bits (924), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 209/565 (36%), Positives = 324/565 (57%), Gaps = 46/565 (8%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDSVFIAGKGF 88 D+ VIE +D HG L++N A++ ++ G+ P +A + ++ D + SV +AG GF Sbjct: 24 DKAVIEPSKDPKHGDLASNLALVSAKAAGMPPRELAAKMAEALRNEDASLASVEVAGPGF 83 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 +N+ SP + R+ + I + +G+ +GKG KV +E+VSANPTGP+H+GH R A VGD Sbjct: 84 LNVTFSPEFWRETIRRIDDAADRFGQATVGKGCKVQVEYVSANPTGPLHIGHGRGAAVGD 143 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 TLA ++ F+GY+VT EYYINDAG Q+ L LS++ R ++ L + PE YY G Y+ Sbjct: 144 TLARILRFAGYDVTTEYYINDAGRQMRLLGLSIWLRAKE-LAGIAVEWPEDYYRGSYIID 202 Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF-HR 267 + +E+ DK L + + + Y +Q ++ I++DL+ ++H ++ SE R Sbjct: 203 IAREMMDK-DPGLTSLSDAEGQDRCFAYGMQTILDGIKEDLREFRVEHQVWFSERSLVER 261 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 G + + + L + G +E L FR+T GDD DR L KS Sbjct: 262 G---AVEETFERLKKAGLSFE----------------KDGALWFRTTDFGDDKDRVLRKS 302 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387 DGS TYFA+D+AY KY RGFD ++ V G+DH GYV R++A AV K ++V+L + Sbjct: 303 DGSLTYFASDIAYHDDKYRRGFDRVVDVWGADHHGYVPRMKAAVQAVGRKAEDLDVVLIQ 362 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 LV L +G + MS RAG F TL VV EVG D+ RFM L RK+ LDFD VK++S Sbjct: 363 LVNLLENGTQVAMSTRAGQFETLADVVKEVGVDAARFMFLSRKSDSHLDFDLALVKQRSM 422 Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF-------DTSELQLIV 500 +NPV+YVQYA+AR RS+ R+A + L P++++ + +L L+ Sbjct: 423 DNPVYYVQYAHARVRSVLRKAAEAGLTL----------PEKTDLALLAPLSEAEDLALLH 472 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 L + V + A A P+ +++YL +LA + H +++ ++P L QA + +L + RL Sbjct: 473 FLDRFEDVAKGAAQALAPHHISYYLMELAGMLHSYYA---KHPVL---QAGDPELALARL 526 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 L+ +V ++ +GL ++GV +P M Sbjct: 527 ALLRSVGQVVKNGLELLGVSAPESM 551 >gi|313622316|gb|EFR92809.1| arginyl-tRNA synthetase [Listeria innocua FSL J1-023] Length = 556 Score = 360 bits (924), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 209/565 (36%), Positives = 319/565 (56%), Gaps = 32/565 (5%) Query: 22 IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80 + +E+ + I++E P+D HG STN AM L+R P IAE IV +K D + Sbjct: 23 VGLEETEVPEILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPGLKKDSKLIKE 82 Query: 81 VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140 V IAG GFIN YL +YL ++ I+ +YG + GKG K IEFVSANPTG +H+GH Sbjct: 83 VEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFGKGEKFQIEFVSANPTGDLHLGH 142 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R A +GD+LA++M +G++V+REYYINDAG QIN L LS RY +AL +++ PE Sbjct: 143 ARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLVLSAEARYFEAL-GLEAEFPEDG 201 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G + +GK+LA KY + +N EE+ + + ++ +R DL+ + D + Sbjct: 202 YRGSDIIALGKDLAAKYGDKYVNASEEERRSVFRVDALAFETGKLRADLEEFRVSFDEWF 261 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE + + + + ++ L GY+YE D L R+T DD Sbjct: 262 SETSLY--EENKVLPALERLRENGYIYE---------------QDGATWL-RTTDFEDDK 303 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR L+KSDGSYTYF D+AY K ERGFD +I + G+DH GY+ R+ A A+ Q Sbjct: 304 DRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGADHHGYIPRMRAAIEALGYSPNQ 363 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + V + +LV L+ DG+ +KMSKR G +T+R +++EVG D+ R+ R + ++FD Sbjct: 364 LEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVGLDATRYFFAMRSSDTHMNFDMS 423 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500 K S +NPV+YVQYA+AR SI R K+ ++ D +++ E+E+D L+ Sbjct: 424 LAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVSKDA-NMSLLETEAEYD-----LLK 477 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 L E+ V+ A + + P+++ YL DLA+ FH ++ + + +N ++T RL Sbjct: 478 VLGEFADVVAEAAVKRAPHRIVRYLNDLATAFHRFYNSN------KVLDMDNLEVTKARL 531 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 L+ + +GL ++GV +P +M Sbjct: 532 ALIKTAQITLRNGLTLLGVSAPEKM 556 >gi|237755374|ref|ZP_04584002.1| arginyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5] gi|237692458|gb|EEP61438.1| arginyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5] Length = 553 Score = 360 bits (923), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 213/564 (37%), Positives = 322/564 (57%), Gaps = 43/564 (7%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 D+I IE P++ G LSTNAA ILS+ L P +A + + DP + V +AG GFI Sbjct: 25 DKIKIESPKEEKFGDLSTNAAFILSKNLNKKPFEVANQLKELFEKDPYFEKVEVAGGGFI 84 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 NL++S ++ +IL+ + E+G+ K+NIE+VSANPTGP+H+GH R AVVG+ Sbjct: 85 NLFISDAFYHQILNKAIEEKDEFGKAKEKNKGKINIEYVSANPTGPLHLGHGRGAVVGNI 144 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 L++L + GY+V RE+YINDAG QI L +SV+ R++Q + PE Y G Y+K + Sbjct: 145 LSNLYDYIGYKVEREFYINDAGNQIKKLGMSVYARFRQ-IEEPSYPFPEDGYHGEYIKDI 203 Query: 210 GKELADKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 KE+ ++L+F EE+ + +Y+ ++ I+ DLK + ++ DI+ SE H Sbjct: 204 AKEIYHYEREKILSFLDEEEAIEFCAEYAKNFLLDEIKKDLKLIGVEFDIWYSER--HLY 261 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 + + L +G +YE L ++++ GD+ DR + KSD Sbjct: 262 QHGKVEQALKFLESKGLIYE----------------KDGALWLKTSLYGDEKDRVIRKSD 305 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 GSYTYFAAD+AY KY R +D +I V G+DH GY RL+A A K+ INVL +L Sbjct: 306 GSYTYFAADIAYHYDKYLRNYDFIINVWGADHHGYFPRLKAAIMAFGVKEDWINVLFIQL 365 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V+L+++G +KMSKR+GDFITLR +V+EVG D+V + + + L+FD ++S E Sbjct: 366 VKLFKNGEEVKMSKRSGDFITLRELVEEVGKDAVIYFFASKDPNTHLNFDIDIALKKSNE 425 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES-EFDTS------ELQLIVH 501 NPVFYVQYA+AR S+FR+A+ F N P+E E D S E L+ + Sbjct: 426 NPVFYVQYAHARISSVFREAQQRF----------NFNPEEDFEADLSLLKEDLERSLMKY 475 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 ++ P I +ATI +P+K+ Y+LAS H ++ + +F+ N+ KL RL Sbjct: 476 ISTIPDEIYDATIKNQPHKITNITYELASRLHKYYYYH------KFLIENDEKLMKARLY 529 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 L+ AV +++ + I+G+ M Sbjct: 530 LLKAVRNVLRTLFKIMGITPVERM 553 >gi|254796447|ref|YP_003081283.1| arginyl-tRNA synthetase [Neorickettsia risticii str. Illinois] gi|254589683|gb|ACT69045.1| arginyl-tRNA synthetase [Neorickettsia risticii str. Illinois] Length = 570 Score = 359 bits (922), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 205/548 (37%), Positives = 317/548 (57%), Gaps = 19/548 (3%) Query: 42 HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRK 100 +G ST + +L++ +GL +A I ++ D+ +V +A GF+N++L+ + Sbjct: 38 YGDFSTAISFLLAKKVGLSLHEVASSIAGGLRSFKDLFKNVSVASGGFVNVFLTSDTWSE 97 Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 L+++ YG + IG G +N+EFVSANPTGP+H+GH R A++ D A L+ G+ Sbjct: 98 FLAAVSDDASGYGFSDIGHGVPLNLEFVSANPTGPLHLGHIRGAIIFDIFAELLDKFGFS 157 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSD-LPEGYYPGVYLKHVGKELADKYSS 219 +TREYYINDAG QI+ L SVF R+ + L +SD P Y G Y+K + L + Sbjct: 158 LTREYYINDAGKQIDLLVYSVFVRFCEQLQGKESDNFPNSCYAGEYIKDIASYLISTFPD 217 Query: 220 ELLNFPEEKWLP-IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 + + E K ++ + M +I+ DL L + +D ++ E + H+G+ + +I Sbjct: 218 SVKDTTELKSFSDTFREVILSLTMDMIKSDLAKLGVSYDCYVREKELHKGNY--VEKVIA 275 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 L +GY+ E LP PK K+ ++RKQ +F S GDD +R L K DGS+TYFA+D+ Sbjct: 276 VLDEKGYLGEEELPSPKGKSGDW--VERKQKVFLSKKFGDDTNRALQKVDGSWTYFASDV 333 Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 AY K ERGF++MI +G+DH+GYVKRL V A+S A+I++ L LV L+++G P+ Sbjct: 334 AYHYHKLERGFNHMIVGLGADHAGYVKRLFGVVEALSGGDARIDIKLYNLVNLFKNGKPV 393 Query: 399 KMSKRAGDFITLRHVVDE-VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457 K+SKR GD ITL V++ + + +RF ML + + +LDFD K S +NP+FYVQYA Sbjct: 394 KLSKRNGDLITLDDVLESGITVNEIRFAMLTKSSEIVLDFDLDKFVSTSYDNPLFYVQYA 453 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 +ARC S+ R+ ++ D + N+ EL L+V LA+ P ++E ++ E Sbjct: 454 HARCCSLLRK-REPSAKCDAAMLVENL----------ELDLMVTLAKLPSLLEMIIVSGE 502 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 +KL FYL ++A FH W+ G +LRF+ + LT RL LV AV + + S L ++ Sbjct: 503 VHKLTFYLQEVAERFHSLWNAGMTQNKLRFIIEDEPGLTNARLTLVKAVKNTLASVLKVL 562 Query: 578 GVESPNEM 585 +E M Sbjct: 563 KIEPAERM 570 >gi|157694133|ref|YP_001488595.1| arginyl-tRNA synthetase [Bacillus pumilus SAFR-032] gi|166980180|sp|A8FIG8|SYR_BACP2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|157682891|gb|ABV64035.1| arginine--tRNA ligase [Bacillus pumilus SAFR-032] Length = 557 Score = 359 bits (922), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 210/589 (35%), Positives = 330/589 (56%), Gaps = 42/589 (7%) Query: 6 DFSSRLKNYLKE------IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 + + ++K+ LKE + + E ++ D +++E P+D HG STN AM L+R Sbjct: 2 NIAEQVKDALKEEIIAAVVKAGLADESQVPD-VLLEVPKDKTHGDYSTNMAMQLARIAKK 60 Query: 60 DPLTIAELIV-ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IV A K ++ + IAG GFIN Y++ YL K++ +++ + YG G Sbjct: 61 APRQIAEDIVKAFDKGKASIEKMDIAGPGFINFYMNNQYLTKLIPAVLEAKEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G KV +EFVSANPTG +H+GH R A VGD+L +++ +G++V+REYYINDAG QIN LA Sbjct: 121 GGQKVQVEFVSANPTGDLHLGHARGAAVGDSLCNILDKAGFDVSREYYINDAGNQINNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY +AL + ++PE Y G +K +G++LAD++ ++ EE+ + ++Y + Sbjct: 181 LSVEVRYFEAL-GLEKEMPEDGYRGEDIKGIGQKLADEFGDRFVHESEEERMKFFREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + ++ +R DL+ + D++ SE + + I ++ L +GYV+E Sbjct: 240 KYELEKLRVDLENFRVPFDVWYSETSLY--ENGKIEPALETLREKGYVFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + RST GDD DR L+K DGS+TY D+AY K K +RGFD +I + G+ Sbjct: 288 ------EDGATWLRSTDFGDDKDRVLIKKDGSFTYLLPDIAYHKDKLDRGFDQLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ ++ V + +LV LY++G +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYPAGKLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA--KDIFPDLD 476 D+ R+ R + +DFD S ENPV+Y QYA+AR S+ RQ K P+L+ Sbjct: 402 LDATRYFFAMRSAATHMDFDLDLAISTSNENPVYYAQYAHARICSMLRQGEEKGYEPNLE 461 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 F I E E+D L+ + +P V+ A + P+++ Y+YDLAS H + Sbjct: 462 KADFSH--IQSEKEYD-----LLKIIGGFPEVVAEAAEKRIPHRVTNYIYDLASALHSFY 514 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + N T RL L+ A + + L +IGV +P +M Sbjct: 515 N------AEKVIDVENETKTTARLSLMKATQITLANALKLIGVSAPEKM 557 >gi|54297958|ref|YP_124327.1| arginyl-tRNA synthetase [Legionella pneumophila str. Paris] gi|81370250|sp|Q5X3M1|SYR_LEGPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|53751743|emb|CAH13165.1| arginine tRNA synthetase [Legionella pneumophila str. Paris] Length = 589 Score = 359 bits (922), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 203/590 (34%), Positives = 329/590 (55%), Gaps = 69/590 (11%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E +D +HG +TN A++L++P P +AE +VA I DP V+ + IAG GFIN Sbjct: 33 IKVENAKDPSHGDYATNLALVLAKPCRQAPKVLAERLVAVIPADPSVEKIEIAGAGFINF 92 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 ++ + I+S I+ G E+GR +G+ KV IEFVSANPTGP+HVGH R A G TL Sbjct: 93 FMRSTARSLIISEILNKGKEFGRGNLGQSQKVLIEFVSANPTGPLHVGHGRGAAFGATLG 152 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ +GY+VT EYY+NDAG Q+N LA+SV+ RY + L P Y G Y+ + + Sbjct: 153 NVLKAAGYDVTLEYYVNDAGRQMNILAVSVWLRYLE-LAGEPIVFPTNGYKGQYVYEIAQ 211 Query: 212 ELADKYSSELLNFPEEKWLPIVKD------------------------------------ 235 E+ + ++ ++ W+ +V++ Sbjct: 212 EMWSEQGNQFVH----PWISVVENLPADEPEGGDKETYIDAIIARAQSLLGKDGFANFHQ 267 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 ++++ ++ I+DDL+A ++ D + SE + I I L +G+ YE Sbjct: 268 HALKTVLDDIKDDLQAFGVRFDSWFSEQSLF--EDGSIEKGIQALKDRGHTYE------- 318 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 L FR+T GD+ DR L++++G TYFA+D+AY KY+RGFD +I + Sbjct: 319 ---------REGALWFRATDFGDEKDRVLVRANGQTTYFASDVAYHWNKYDRGFDRVIDI 369 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 G+DH GYV R++ A+ ++ ++V+L + LYR G ++MS R+G F+TLR + + Sbjct: 370 FGADHHGYVTRIKTAVKALGHDESALDVILVQFAILYRGGDRVQMSTRSGSFVTLRELRE 429 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 EVG+D+ R+ + RK + +DFD K +S +NPV+Y+QYA+AR S+ RQ K+ Sbjct: 430 EVGNDAARYFYVARKPEQHMDFDLDLAKSESSDNPVYYIQYAHARICSVLRQLKERGLKW 489 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 D D+ +N+ E + +T+ + LI A YP VI++A + EP++LA+YL +LA+ H + Sbjct: 490 DKDMGLKNLDLLEQQHETTLISLI---ARYPEVIQSAAASCEPHQLAYYLRELANGLHSY 546 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + + +L RL L+ +V ++N+GL I+GV +P M Sbjct: 547 YNAIQ-------LLCEQEQLRCARLCLLESVRQVLNNGLAILGVSAPESM 589 >gi|52842248|ref|YP_096047.1| arginyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|81377147|sp|Q5ZTX7|SYR_LEGPH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|52629359|gb|AAU28100.1| arginyl tRNA synthetase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 589 Score = 359 bits (921), Expect = 9e-97, Method: Compositional matrix adjust. Identities = 203/590 (34%), Positives = 329/590 (55%), Gaps = 69/590 (11%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E +D AHG +TN A++L++P P +AE +VA I +DP V+ + IAG GFIN Sbjct: 33 IKVENAKDPAHGDYATNLALVLAKPCRQAPKVLAERLVAVIPVDPSVEKIEIAGAGFINF 92 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 ++ + I+S I+ G E+GR +G+ KV IEFVSANPTGP+HVGH R A G TL Sbjct: 93 FMRSTARSLIISEILNKGKEFGRGNLGQSQKVLIEFVSANPTGPLHVGHGRGAAFGATLG 152 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ +GY+VT EYY+NDAG Q+N LA+SV+ RY + L P Y G Y+ + + Sbjct: 153 NVLKAAGYDVTLEYYVNDAGRQMNILAVSVWLRYLE-LAGEPIVFPANGYKGQYVYEIAQ 211 Query: 212 ELADKYSSELLNFPEEKWLPIVKD------------------------------------ 235 E+ + ++ ++ W+ +V++ Sbjct: 212 EIWSEQGNQFVH----PWISVVENLPADEPEGGDKETYIDAIIARAQSLLGKDGFANFHQ 267 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 ++++ ++ I+DDL+A ++ D + SE + I I L +G+ YE Sbjct: 268 HALKTVLDDIKDDLQAFGVRFDSWFSEQSLF--EDGSIEKGIQALKDRGHTYE------- 318 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 L FR+T GD+ DR L++++G TYFA+D+AY KY+RGFD +I + Sbjct: 319 ---------REGALWFRATDFGDEKDRVLVRANGQTTYFASDVAYHWNKYDRGFDRVIDI 369 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 G+DH GYV R++ A+ ++ ++V+L + LYR G ++MS R+G F+TLR + + Sbjct: 370 FGADHHGYVTRIKTAVKALGHDESALDVILVQFAILYRGGDRVQMSTRSGSFVTLRELRE 429 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 EVG+D+ R+ + RK + +DFD K +S +NPV+Y+QYA+AR S+ RQ K+ Sbjct: 430 EVGNDAARYFYVARKPEQHMDFDLDLAKSESSDNPVYYIQYAHARICSVLRQLKERGLKW 489 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 D D+ +N+ E + + + + LI A YP VI++A + EP++LA+YL +LA+ H + Sbjct: 490 DKDMGLKNLDLLEQQHEATLISLI---ARYPEVIQSAAASCEPHQLAYYLRELANGLHSY 546 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + + +L RL L+ +V ++N+GL I+GV +P M Sbjct: 547 YNAIQ-------LLCEQEQLRCARLCLLESVRQVLNNGLAILGVSAPESM 589 >gi|165918171|ref|ZP_02218257.1| arginyl-tRNA synthetase [Coxiella burnetii RSA 334] gi|165918031|gb|EDR36635.1| arginyl-tRNA synthetase [Coxiella burnetii RSA 334] Length = 586 Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 213/607 (35%), Positives = 327/607 (53%), Gaps = 61/607 (10%) Query: 11 LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 L ++ + K ++ ++ I I D HG +TN A+ LS+ G+ P +AE IV Sbjct: 9 LNQAIERLKTKGVLKPEVTPVIKITHTTDPQHGDFATNLALTLSKAAGMSPHALAEKIVE 68 Query: 71 RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130 + + V IAG GFIN +++ + ++SSI+ +G +YGR+ +GKG +V++E+VSA Sbjct: 69 ALPPSGQITEVEIAGPGFINFFVTEGSYQTVVSSILKAGKDYGRSEMGKGQRVHMEYVSA 128 Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190 NPTGP+HVGH R A G +A+L+ +G+EV REYY+NDAG Q+ LALSV+ RY Q Y Sbjct: 129 NPTGPLHVGHGRGAAYGACVANLLNAAGFEVHREYYVNDAGRQMGILALSVWVRYLQG-Y 187 Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLN--------FPEE------------KWL 230 +LP+ Y G Y+ + + L KY + + PEE W+ Sbjct: 188 EASIELPKNAYQGEYIIDIAEALKAKYGKQFYHSVESIQAKIPEEIDSNADPEAYLDAWV 247 Query: 231 PIVKDY------------SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 KD ++ +++ I++DL+ ++ +D + E R I++ +D Sbjct: 248 TAQKDLLGPKDFECVFQAALDSILNDIKNDLEEFSVTYDDWFPESRLVR--EGLIQEGLD 305 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 L + GYVYE +R Q FR+T +GD+ DR L + +G TYFAAD+ Sbjct: 306 LLTKHGYVYE---------------KNRAQW-FRATALGDEKDRVLFRKNGLPTYFAADV 349 Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 AY K+ +G+D +I + G+DH GY+ R+ + + ++++LL + LYR + Sbjct: 350 AYHLHKFNQGYDQIIDIFGADHHGYIPRIRGFLKGLGKAPEKLHILLVQFAILYRGNEKV 409 Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 MS R G F+TLR + EVG+D+ RF + RK + LDFD K QS ENPV+Y+QYA+ Sbjct: 410 SMSTRGGTFVTLRELRHEVGNDAARFFYIMRKPDQHLDFDLELAKSQSNENPVYYIQYAH 469 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 AR S+FRQ K + D PR + E +L+ L YP VI+ A + P Sbjct: 470 ARICSVFRQLKTTQKNWD---RPRGMENLSLLSTNHEKELLATLGRYPEVIKRAAMNYAP 526 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 + LA YL LA+ FH ++ N ++ +N L RL L++AV II +GL ++G Sbjct: 527 HLLAHYLQTLANQFHTYY-----NAERFLIEDDN--LRNARLNLINAVQQIIRNGLTLLG 579 Query: 579 VESPNEM 585 V +P EM Sbjct: 580 VSAPEEM 586 >gi|148359603|ref|YP_001250810.1| arginyl tRNA synthetase [Legionella pneumophila str. Corby] gi|296107645|ref|YP_003619346.1| arginyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy] gi|226701418|sp|A5IDL4|SYR_LEGPC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|148281376|gb|ABQ55464.1| arginyl tRNA synthetase [Legionella pneumophila str. Corby] gi|295649547|gb|ADG25394.1| arginyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy] Length = 586 Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 204/590 (34%), Positives = 329/590 (55%), Gaps = 69/590 (11%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E +D AHG +TN A++L++P P +AE +VA I DP V+ + IAG GFIN Sbjct: 30 IKVENAKDPAHGDYATNLALVLAKPCRQAPKVLAERLVAVIPSDPSVEKIEIAGAGFINF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 ++ + I+S I+ G E+GR +G+ KV IEFVSANPTGP+HVGH R A G TL Sbjct: 90 FMRNTARSLIISEILNKGKEFGRGNLGQSQKVLIEFVSANPTGPLHVGHGRGAAFGATLG 149 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ +GY+VT EYY+NDAG Q+N LA+SV+ RY + L P Y G Y+ + + Sbjct: 150 NVLKAAGYDVTLEYYVNDAGRQMNILAVSVWLRYLE-LAGEPIVFPANGYKGQYVYEIAQ 208 Query: 212 ELADKYSSELLNFPEEKWLPIVKD------------------------------------ 235 E+ + ++ ++ W+ +V++ Sbjct: 209 EMWSEQGNQFVH----PWISVVENLPADEPEGGDKETYIDAIIARAQSLLGKDGFANFHQ 264 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 ++++ ++ I+DDL+A ++ D + SE + I I L +G+ YE Sbjct: 265 HALKTVLDDIKDDLQAFGVRFDSWFSEQSLF--EDGSIEKGIQALKDRGHTYE------- 315 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 L FR+T GD+ DR L++++G TYFA+D+AY KY+RGFD +I + Sbjct: 316 ---------REGALWFRATDFGDEKDRVLVRANGQTTYFASDVAYHWNKYDRGFDRVIDI 366 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 G+DH GYV R++ A+ ++ ++V+L + LYR G ++MS R+G F+TLR + + Sbjct: 367 FGADHHGYVTRIKTAVKALGHDESALDVILVQFAILYRGGDRVQMSTRSGSFVTLRELRE 426 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 EVG+D+ R+ + RK + +DFD K +S +NPV+Y+QYA+AR S+ RQ K+ Sbjct: 427 EVGNDAARYFYVARKPEQHMDFDLDLAKSESSDNPVYYIQYAHARICSVLRQLKERGLKW 486 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 D D+ +N+ E + +T+ + LI A YP VI++A + EP++LA+YL +LA+ H + Sbjct: 487 DKDMGLKNLDLLEQQHETTLISLI---ARYPEVIQSAAASCEPHQLAYYLRELANGLHSY 543 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + + +L RL L+ +V ++N+GL I+GV +P M Sbjct: 544 YNAIQ-------LLCEQEQLRCARLCLLESVRQVLNNGLAILGVSAPESM 586 >gi|313636233|gb|EFS02062.1| arginyl-tRNA synthetase [Listeria seeligeri FSL S4-171] Length = 556 Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 210/569 (36%), Positives = 314/569 (55%), Gaps = 40/569 (7%) Query: 22 IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80 + +E + I++E P+D HG STN AM L+R P IAE IV +K D + Sbjct: 23 VGLEAAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPELKKDNKLIKE 82 Query: 81 VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140 V IAG GFIN YL +YL ++ I+ YG++ GKG K IEFVSANPTG +H+GH Sbjct: 83 VEIAGPGFINFYLDNAYLTDLVPVILTEDDAYGKSDFGKGEKFQIEFVSANPTGDLHLGH 142 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R A +GD+LA++M +G+ V+REYYINDAG QIN L LS RY +AL +SD PE Sbjct: 143 ARGAAIGDSLANIMTMAGFNVSREYYINDAGNQINNLVLSAEARYFEAL-GLESDFPEDG 201 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G + +GK+LA KY + ++ EE+ + + ++ +R DL+ + D + Sbjct: 202 YRGADIISLGKDLAAKYGDKYVSTSEEERRSVFRVDALDFETDKLRADLEEFRVSFDEWF 261 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE + + + + ++ L GY+YE D L R+T DD Sbjct: 262 SETSLY--EENKVLPALERLRENGYIYE---------------QDGATWL-RTTDFEDDK 303 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR L+KSDGSYTYF D+AY K ERGFD +I + G+DH GY+ R+ A A+ Q Sbjct: 304 DRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGADHHGYIPRMRAAIEALGYSPNQ 363 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + V + +LV L+ DG+ +KM R G +T+R +++EVG D+ R+ R + ++FD Sbjct: 364 LEVEIIQLVHLFEDGVQVKMXXRTGKSVTMRDLIEEVGLDATRYFFAMRSSDTHMNFDMS 423 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSEL 496 K S +NPV+YVQYA+AR SI R K D+ + D L + E+E+D Sbjct: 424 LAKSTSNDNPVYYVQYAHARISSILRAGKEQNLDVSKEADMSL-----LQTEAEYD---- 474 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 L+ L E+ V+ A + + P+++ YL DLA+ FH ++ + + +N ++T Sbjct: 475 -LLKVLGEFADVVAEAAVKRAPHRIVRYLNDLAAAFHRFYNSN------KVLDMDNLEVT 527 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L+ + +GL ++GV +P +M Sbjct: 528 KARLALIKTAQITLRNGLTLLGVSAPEKM 556 >gi|260891979|ref|YP_003238076.1| arginyl-tRNA synthetase [Ammonifex degensii KC4] gi|260864120|gb|ACX51226.1| arginyl-tRNA synthetase [Ammonifex degensii KC4] Length = 564 Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 203/561 (36%), Positives = 316/561 (56%), Gaps = 44/561 (7%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID--PDVDSVFIAGKGFIN 90 +E PR+ G +TN A L+ G P +A L+ D P +D + +AG G++N Sbjct: 40 TLEVPREEGFGDFTTNLAFKLASRAGKPPREVAALLAEHFPSDASPYLDRLEVAGAGYLN 99 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL P +L + L I++ G +YGR +G+ KVN+EFVSANPTG +H+G+ R A +GD++ Sbjct: 100 FYLKPHWLEEALREILLKGEDYGRQDLGRRRKVNVEFVSANPTGLLHMGNARGAALGDSI 159 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+L+AF G+EVTREYYINDAG QI A S+ RY+QA + P+GY+ ++ V Sbjct: 160 AALLAFCGFEVTREYYINDAGYQIERFAASLEARYRQAFGEDVPVPPDGYHGQDLVETVK 219 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 + +++ L PEE+ +V+ ++++ ++ IR+ L+ + D++ SE + H Sbjct: 220 RFISEHGDRYLHTSPEERREALVR-FAIREKLEAIRNSLENFGVHFDVWFSEQELHAS-- 276 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + + I+ L R+G YE L FR++ G D L++++G Sbjct: 277 GKVAETIEELKRRGATYE----------------KEGALWFRASAYGAPKDDVLVRANGL 320 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFAAD+AY + K ERGF+ MI + G+DH G+V RL+A A+ ++ V++ +LVR Sbjct: 321 PTYFAADIAYHRNKLERGFEWMINLWGADHHGHVPRLKAALQALGYDPERLTVIIMQLVR 380 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L R G ++MSKRAG+++TL ++ EVG D+ R+ +WR LDFD K QS ENP Sbjct: 381 LTRGGEAVRMSKRAGEYVTLDDLLAEVGKDAARYFFVWRSADAHLDFDLELAKAQSMENP 440 Query: 451 VFYVQYAYARCRSIFRQ----AKDIFP--DLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 V+Y+QYA+AR S+FRQ K + P +DF +E E E +L+ LA Sbjct: 441 VYYIQYAHARIASLFRQLAERGKSLPPPEKIDFSFL------REPE----ERRLMYKLAL 490 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 +P +E A + P++LA YL+DL+S+FH ++ R + L RL L Sbjct: 491 FPEEVEGAALNLAPHRLAAYLHDLSSLFHSFYNEHR-------IIGAGSGLEEARLGLAA 543 Query: 565 AVASIINSGLNIIGVESPNEM 585 A ++ GL ++G+ +P M Sbjct: 544 ATQLVLRQGLKLLGISAPERM 564 >gi|294102407|ref|YP_003554265.1| arginyl-tRNA synthetase [Aminobacterium colombiense DSM 12261] gi|293617387|gb|ADE57541.1| arginyl-tRNA synthetase [Aminobacterium colombiense DSM 12261] Length = 558 Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 206/589 (34%), Positives = 327/589 (55%), Gaps = 40/589 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKI----LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 AD L+ L E + EK + + IE+P++ HG +TNAAM L+R + Sbjct: 2 ADVLRTLRQLLDEAVLSMAEEKNVAIDDIPEFAIEKPKNEGHGDWATNAAMQLARIFHDN 61 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE IV+R+ +V IAG GFIN LS ++ +++ I+ +YGR IG G Sbjct: 62 PRKLAEQIVSRLADCDYFTAVEIAGPGFINFRLSKKWMGEVVKDIITLDDDYGRQNIGGG 121 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KV +EFVSANPTGP+HVGH R A VGD +A ++ F+G++V +EYYINDAG Q+ L S Sbjct: 122 EKVQVEFVSANPTGPLHVGHGRGAAVGDIIARILDFTGWQVEKEYYINDAGLQMEILGRS 181 Query: 181 VFWRYQQALYNND-SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 RY + L + + PE Y G Y+ + +E+ D+ L+ P E+ L + Y+ Sbjct: 182 TQSRYFKLLNCPERAPFPEDAYKGEYIYDLAREIIDQEGDRFLSLPLEESLGFFQTYAAG 241 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 +++ I+ DL + +D++ SE + D + + ++ L + GY YE Sbjct: 242 RILEGIKKDLADFGVAYDVWFSEKSLY--DRNLVPQAMEMLNKHGYAYE----------- 288 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + L FR+T GD+ DR L++++G TYFA+D+ Y K+ RGF +I V G+D Sbjct: 289 -----EEGALWFRATAFGDEKDRVLIRNNGVPTYFASDITYHMEKFSRGFQRVIDVWGAD 343 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYV R++A A+ +++ + V+L + V L R G + MS R+G F+TLR V+DEVG Sbjct: 344 HHGYVPRMKAGVEALGKERGSLEVVLIQFVNLLRGGEQVAMSTRSGQFVTLRDVMDEVGV 403 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLD 476 D+ R+ + R++ LDFD K+ S ENPV+YVQYA+AR S+ ++A++ P L Sbjct: 404 DATRYFFVMRRSDSHLDFDLELAKQSSNENPVYYVQYAHARICSVLKEAENRHIPMPGLA 463 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 P ++ E E +L+ L+ +P+ ++ A + + P+ + + YDLA+ FH + Sbjct: 464 -GFNPELLVSDE------EKKLVNRLSLFPQEVKRAALDRAPHVIVSFAYDLAADFHSFY 516 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R + + + MRL LV A S+++ L ++GV +P M Sbjct: 517 NANR-------ILGERQDIMDMRLLLVQASKSVLSRSLKLLGVSAPERM 558 >gi|325291383|ref|YP_004267564.1| arginyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271] gi|324966784|gb|ADY57563.1| arginyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271] Length = 561 Score = 357 bits (917), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 210/564 (37%), Positives = 325/564 (57%), Gaps = 42/564 (7%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKG 87 L VIE PR+ HG L+TN AM+L++ P IA +I++ + + + + IAG G Sbjct: 33 LPAFVIEEPRERQHGDLATNLAMLLTKIAKKAPRDIAGVIISHLNTEGTWIKACEIAGPG 92 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FIN L +L K+L ++ G YG IGKG K+ +EFVSANPTG +H+G+ R A +G Sbjct: 93 FINFKLDSGWLGKVLPEVLNKGERYGHVDIGKGQKIQVEFVSANPTGLLHMGNARGAALG 152 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D+LASL++ +GYEV+RE+YINDAG QI+ ALS+ RY Q L D LPE Y G L Sbjct: 153 DSLASLLSMAGYEVSREFYINDAGNQIHHFALSLEARYLQ-LMGQDVPLPENGYHGEDLI 211 Query: 208 HVGKEL----ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 +EL DKY L PE + +V+ Y++ ++ I++ L + +D++ SE Sbjct: 212 ETVRELIKLDGDKY---LRTEPELRQEYLVR-YALNEKIRNIKETLGKFGVHYDVWFSEQ 267 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323 H D I++ + + +G++YE L +ST+ GD+ D Sbjct: 268 SLH--DSGSIQETMQEMMDKGFIYE----------------KEGALWLKSTLFGDEKDEV 309 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383 +++S+G TYFAAD+AY K K+ERGF+ +I + G+DH G+V R++ A+ ++ + Sbjct: 310 VVRSNGVPTYFAADIAYHKNKFERGFEQVINIWGADHHGHVARMKGAMQALGYDPERLQI 369 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443 +L +LVRL +DG +KMSKR+G +ITL+ ++DEVG D+ RF + R ++FD K Sbjct: 370 ILMQLVRLIQDGEIVKMSKRSGQYITLQELMDEVGRDAARFFFIMRDPDSTVEFDLDLAK 429 Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKD--IFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501 QS +NPV+YVQYA+AR SI RQA++ +++ D+ +++ + E D L+ Sbjct: 430 SQSADNPVYYVQYAHARLCSILRQAEEQGFAHEVEPDIKQISLLASQEECD-----LLKK 484 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 LA+ P I A EP++LA Y+ +LA +FH ++ R V ++ L RL Sbjct: 485 LADLPGEIALAARMTEPHRLARYVMELAGLFHSFYNSHR-------VLVDDADLRTARLA 537 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 L+ A+ ++ + L I+GV +P M Sbjct: 538 LIRAIRQVLANVLTILGVTAPERM 561 >gi|239906966|ref|YP_002953707.1| arginyl-tRNA synthetase [Desulfovibrio magneticus RS-1] gi|259511642|sp|C4XSX9|SYR_DESMR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|239796832|dbj|BAH75821.1| arginyl-tRNA synthetase [Desulfovibrio magneticus RS-1] Length = 551 Score = 357 bits (917), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 210/563 (37%), Positives = 316/563 (56%), Gaps = 44/563 (7%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 + IE PRD AHG L+TN AM+ S+ P +AE + + DP + SV +AG GF+N Sbjct: 25 KTTIEPPRDKAHGDLATNVAMMASKAAKKPPRELAESLRQALAADPRLASVEVAGPGFLN 84 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + +P++ ++ + + +G YG IG+G K+ +EFVSANPTGP+H+GH R A VGD+L Sbjct: 85 VAFTPAFWQETVCDVAKAGDGYGLLDIGQGVKIQVEFVSANPTGPLHIGHGRGAAVGDSL 144 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A ++ +G+ V EYYINDAG Q+ L +S+ +RY++ L PE YY G Y+ + Sbjct: 145 ARVLRAAGFTVETEYYINDAGRQMRILGMSILYRYKE-LIGEPVTEPEDYYRGEYVIPLA 203 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 +++ D + +LL PE + I + + + ++ I+ DL+ + HD++ E Sbjct: 204 QDMIDAHGRKLLEMPEAEATDICRLHGEREILAGIKKDLEDFRVHHDVWFPESTLLAA-- 261 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + + L + Y D D F ST GDD DR L+KS G Sbjct: 262 GAVDAAFNELRDKKLAY---------------DQD-GAFWFASTAFGDDKDRVLVKSGGE 305 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCELV 389 TYFA+D+AY K+ RGFD ++ + G+DH GYV R++A +A+ + +A + V+L +LV Sbjct: 306 LTYFASDIAYHADKFRRGFDVVVDIWGADHHGYVPRMKACVSALGRDPEASLKVILVQLV 365 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 L + G I MS RAG F TL VV EVG+DS RFM L RK+ LDFD VKE+S +N Sbjct: 366 NLLKGGEQIAMSTRAGKFETLADVVKEVGADSARFMFLSRKSDSHLDFDLDAVKEKSMDN 425 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL-------QLIVHL 502 PV+YVQYA+AR RS+F +A++ R E+ + L +L+ L Sbjct: 426 PVYYVQYAHARVRSLFAKAQE-----------RGQAVAETSPELLALLTTDEDLELLKLL 474 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 +YP + A P+ ++FYL DLA H +++ NP L A + L RL+L Sbjct: 475 EQYPDTVAAAARTFSPHLVSFYLRDLAGRLHRYYT---VNPVL---TAGSDDLASARLRL 528 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 + AVA I +GL+++GV +P++M Sbjct: 529 LDAVAQTIKNGLDLLGVSAPDKM 551 >gi|126652598|ref|ZP_01724762.1| arginyl-tRNA synthetase [Bacillus sp. B14905] gi|126590589|gb|EAZ84706.1| arginyl-tRNA synthetase [Bacillus sp. B14905] Length = 555 Score = 357 bits (916), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 198/556 (35%), Positives = 319/556 (57%), Gaps = 35/556 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90 I +E P+D A+G +TN AM L++ P IAE I+ + + D++ + IAG GF+N Sbjct: 33 IHLETPKDKANGDYATNIAMQLTKLAKKPPRAIAEAILENLDTEGTDIEKIDIAGPGFMN 92 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + + +L +++ ++ G +YGR+ G G KV IEFVSANPTG +H+GH R A VGD+L Sbjct: 93 ITVRKDFLTGVVTQVIEQGADYGRSNAGAGEKVQIEFVSANPTGDLHLGHARGASVGDSL 152 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +++ +GY V+REYYINDAG QIN LA S+ RY+QAL D+++PE Y G + + Sbjct: 153 CNVLDMAGYSVSREYYINDAGNQINNLANSLEARYKQAL-GLDAEMPEDGYHGPDIIEIA 211 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 +LA ++ +L +E+ + + + + ++ DL + D++ SE + + Sbjct: 212 GKLAIEHGDAILTKSDEERFAFFRQHGLALELDKLKTDLANFRVNFDVWYSETSLY--EN 269 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I +D L G+V+E + FRST GDD DR L+K+DGS Sbjct: 270 GKIEVALDKLKANGHVFE----------------EDGATWFRSTTFGDDKDRVLIKNDGS 313 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 +TY D+AY + K RGFD +I + G+DH GY+ R++A A+ + + V + ++V+ Sbjct: 314 FTYLTPDIAYHEDKIVRGFDKLINIWGADHHGYIPRMKAAIQALGYDRDTLEVEVIQMVQ 373 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 LY++G KMSKR G+ +T+R +V+EVG D+VR+ + +DFD QS ENP Sbjct: 374 LYKNGEKFKMSKRTGNAVTMRELVEEVGLDAVRYFFVKTAGDSHMDFDLDLAVSQSNENP 433 Query: 451 VFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 V+Y QYA+AR SI R A + F +L N++ E E D L+ + ++P+V+ Sbjct: 434 VYYAQYAHARISSILRSANEQGFAATSENL---NLLTAEKEID-----LLKKIGDFPQVV 485 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 +A + P+++A Y+ + A+ FH ++ + + A+N++LT RL L+ AV + Sbjct: 486 ADAAKHRTPHRIANYIQETAAAFHSFYN------AEKVLDASNKELTEARLALITAVRTT 539 Query: 570 INSGLNIIGVESPNEM 585 I + L +IGV +P +M Sbjct: 540 IANALRLIGVSAPEKM 555 >gi|212213468|ref|YP_002304404.1| arginyl-tRNA synthetase [Coxiella burnetii CbuG_Q212] gi|238065086|sp|B6J3D4|SYR_COXB2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|212011878|gb|ACJ19259.1| arginyl-tRNA synthetase [Coxiella burnetii CbuG_Q212] Length = 592 Score = 357 bits (916), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 212/610 (34%), Positives = 326/610 (53%), Gaps = 61/610 (10%) Query: 8 SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 ++ L ++ + K ++ ++ I I D HG +TN A+ LS+ G+ P +AE Sbjct: 12 ATLLNQAIERLKTKGVLKPEVTPVIKITHTTDPQHGDFATNLALTLSKAAGMSPHALAEK 71 Query: 68 IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127 IV + + V IAG GFIN +++ + I+SSI+ +G +YGR+ +GKG +V++E+ Sbjct: 72 IVEALPPSGQITEVEIAGPGFINFFVTEGSYQTIVSSILKAGKDYGRSEMGKGQRVHMEY 131 Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187 VSANPTGP+HVGH R A G +A+L+ +G+EV REYY+NDAG Q+ LALSV+ RY Q Sbjct: 132 VSANPTGPLHVGHGRGAAYGACVANLLNAAGFEVHREYYVNDAGRQMGILALSVWIRYLQ 191 Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN--------FPEE------------ 227 Y +LP+ Y G Y+ + + L KY + + PEE Sbjct: 192 G-YEASIELPKNAYQGEYIIDIAEALKAKYGKQFYHSVESIQAKIPEEIDSNADPEAYLD 250 Query: 228 KWLPIVKDY------------SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275 W+ KD ++ +++ I++DL+ + +D + E R I++ Sbjct: 251 AWVTAQKDLLGPKDFECVFQAALDSILNDIKNDLEEFGVTYDDWFPESRLVR--EGLIQE 308 Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335 +D L + GYVYE FR+T +GD+ DR L++ +G TYFA Sbjct: 309 GLDLLTKHGYVYE----------------KNGAQWFRATALGDEKDRVLIRKNGLPTYFA 352 Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395 AD+AY K+ +G+D +I + G+DH GY+ R+ + + ++++LL + LYR Sbjct: 353 ADVAYHLHKFNQGYDQIIDIFGADHHGYIPRIRGFLKGLGKAPEKLHILLVQFAILYRGN 412 Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455 + MS R G F+TLR + EVG+D+ RF + RK + LDFD K QS ENPV+Y+Q Sbjct: 413 EKVSMSTRGGTFVTLRELRHEVGNDAARFFYIMRKPDQHLDFDLELAKSQSNENPVYYIQ 472 Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515 YA+AR S+FRQ K + D PR + E +L+ L YP VI+ A + Sbjct: 473 YAHARICSVFRQLKTTQKNWD---RPRGMENLSLLSTNYEKELLATLGRYPEVIKRAAMN 529 Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575 P+ LA YL LA+ FH ++ N ++ +N L RL L++AV II +GL Sbjct: 530 YAPHLLAHYLQTLANQFHTYY-----NAERFLIEDDN--LRNARLNLINAVQQIIRNGLT 582 Query: 576 IIGVESPNEM 585 ++GV +P EM Sbjct: 583 LLGVSAPEEM 592 >gi|147679179|ref|YP_001213394.1| arginyl-tRNA synthetase [Pelotomaculum thermopropionicum SI] gi|146275276|dbj|BAF61025.1| arginyl-tRNA synthetase [Pelotomaculum thermopropionicum SI] Length = 565 Score = 357 bits (916), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 203/561 (36%), Positives = 322/561 (57%), Gaps = 45/561 (8%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFINL 91 +E PR+ HG +TN A++L+RP + P AE++ + V+ V IAG GFIN Sbjct: 42 TVEVPREKEHGDFATNLALLLARPARMAPRRAAEILAQNFSQTGTWVERVEIAGPGFINF 101 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 YL+P+++ + L I+ G +YGR GKG KV +EFVSANPTG +H+G+ R A +GD++A Sbjct: 102 YLNPAWVYQALPRIIRLGEDYGRVNQGKGKKVQVEFVSANPTGLLHMGNARGAALGDSIA 161 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL-KHVG 210 +++ F+GY+VTRE+YINDAG QI LS+ RY Q L D +PEG Y G L K V Sbjct: 162 AILEFAGYDVTREFYINDAGNQIENFGLSLEARYMQ-LMGRDVPVPEGGYHGEDLVKTVR 220 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 +A L P E+ +VK +++ + I+ L+ + +D++ SE H D Sbjct: 221 DFIAVNGDRHLALPPGERRAALVK-FALADKLGAIKKTLEEFGVHYDVWFSEQSLH--DS 277 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 ++D ++ L GY+YE + L F++T G D D +++S+G Sbjct: 278 GAVQDTLNYLREMGYIYE----------------NENALWFKATSFGADKDEVVVRSNGV 321 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFA+D+AY + K++RGF+ +I + G+DH G+V R++A AA+ A ++V++ +LVR Sbjct: 322 PTYFASDIAYHRNKFQRGFEWVINIWGADHHGHVPRMKAAVAALGYDPAALDVVIMQLVR 381 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 LY+ G ++MSKR+G F+TL +++EVG D+ R+ + R + LDFD + +S ENP Sbjct: 382 LYKGGELVRMSKRSGQFVTLEELMEEVGRDAARYFFVMRSSDSHLDFDLDLARAESNENP 441 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS------ELQLIVHLAE 504 V+Y+QYA+AR SI RQ ++ + +P S+ D S EL L LA+ Sbjct: 442 VYYIQYAHARISSILRQLEERGEE----------VPDPSQVDYSLLKEEQELALARKLAD 491 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 +P + +A P ++A YL++LA + H ++ R V ++R+L+ RL LV Sbjct: 492 FPEEVSSAARGLAPQRIARYLHELAGLLHSFYNSHR-------VITSDRELSRARLVLVS 544 Query: 565 AVASIINSGLNIIGVESPNEM 585 A + + L ++G+ +P M Sbjct: 545 ATRITLRNALGLLGLSAPERM 565 >gi|296134410|ref|YP_003641657.1| arginyl-tRNA synthetase [Thermincola sp. JR] gi|296032988|gb|ADG83756.1| arginyl-tRNA synthetase [Thermincola potens JR] Length = 561 Score = 357 bits (915), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 198/554 (35%), Positives = 320/554 (57%), Gaps = 31/554 (5%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFINL 91 V+E PR+ HG +TN AM+L+R + P IAE IV ++ K D + ++ +AG GFIN Sbjct: 38 VLEVPRERGHGDFATNIAMLLTRQARMAPRQIAEAIVKQLDKSDLPIVNIEVAGPGFINF 97 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 YLS +L +L I G +YG + +G G KV +EFVSANPTG +H+G+ R A +GD++A Sbjct: 98 YLSAEWLYDVLPEIEDQGAKYGYSSVGNGLKVQVEFVSANPTGLLHMGNARGAALGDSMA 157 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 SL+A +G++V RE+YINDAG QI S+ RY Q L D PE Y G + + Sbjct: 158 SLLAAAGFDVQREFYINDAGNQIENFGKSLEARYFQ-LLGRDVAFPEDGYHGQDIIDTVQ 216 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 + D+ ++ L+ ++ ++ + IR L +++D++ SE H D Sbjct: 217 GIIDREGNKYLSLDSRLRRELLVKEALNEKLDGIRKSLADFGVKYDVWFSEQTLH--DSG 274 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + +++ L +GY+YE L F++T GD+ D +++S+G+ Sbjct: 275 AVEQVLNELREKGYIYE----------------HEGALWFKATEFGDEKDEVVVRSNGTP 318 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 TYFAAD+AY K K++RGF +I + G+DH G+V RL+ A+ ++ V++ +LVRL Sbjct: 319 TYFAADIAYHKNKFDRGFQWVINIWGADHHGHVNRLKGAMQALGYDPDKLQVVIMQLVRL 378 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 +R G ++MSKR+G+F+TL +V+EVG D+ R+ + R LDFD K +S +NPV Sbjct: 379 FRGGEIVRMSKRSGEFVTLDDLVEEVGKDAARYFFVMRSPDSHLDFDMDLAKSKSNDNPV 438 Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511 +Y+QYA+AR SIFRQ ++ + RN+ P + +EL+L+ LA++P + Sbjct: 439 YYIQYAHARICSIFRQVQESGISVP---SARNINPAVLK-QAAELELLRKLADFPTEVAE 494 Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571 A + EP+++A YL++LA +FH ++ R V ++ + RL LV +V ++ Sbjct: 495 AAVNLEPHRMARYLHELAGIFHSFYNSNR-------VMIEDKDIRDARLVLVKSVQQVLK 547 Query: 572 SGLNIIGVESPNEM 585 +GL ++G+ +P M Sbjct: 548 TGLALLGLTAPERM 561 >gi|329930208|ref|ZP_08283821.1| arginine--tRNA ligase [Paenibacillus sp. HGF5] gi|328935230|gb|EGG31711.1| arginine--tRNA ligase [Paenibacillus sp. HGF5] Length = 559 Score = 357 bits (915), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 209/567 (36%), Positives = 314/567 (55%), Gaps = 39/567 (6%) Query: 24 VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVF 82 V ++ L I +E P+D +HG L+TN AM L+R +P IAE I+ + ++ Sbjct: 27 VSREELPAITLEVPKDKSHGDLATNVAMQLTRIAKKNPRQIAEAILEHLDTAKASIEKAE 86 Query: 83 IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 IAG GFIN L YL I++ + G YGR G+G KV +EFVSANPTG +H+GH R Sbjct: 87 IAGPGFINFTLDKGYLYPIVALVQEQGDNYGRIATGEGQKVQMEFVSANPTGSLHLGHAR 146 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202 A VGD L +++ F+GYEVTREYYINDAG Q+ L S+ RY Q L D+++PE Y Sbjct: 147 GAAVGDALCNVLDFAGYEVTREYYINDAGNQVVNLVKSLEARYLQEL-GQDAEMPEDGYH 205 Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262 G +K KEL + LL+ + ++ + ++ + I+ DL + D + SE Sbjct: 206 GEDIKGFAKELVAEKGDSLLSMDPGERTAFLRQFGLEKELGKIKRDLNRFRVHFDEWFSE 265 Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322 + + + ++ L +G YE K T R+T GDD DR Sbjct: 266 TSLY--EDGLVEKSLEELKAKGEAYE------KDGAT----------WLRTTDYGDDKDR 307 Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 L+K+DG+YTY D+AY + KYERG+D ++ + G+DH GYV R++A A+ ++ Sbjct: 308 VLVKNDGTYTYLTPDIAYHRNKYERGYDKILNIWGADHHGYVPRMKAAMEALGNDPDKLI 367 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 VL+ ++V L++DG +KMSKR G +T+ ++DEVG D++R+ R LDFD Sbjct: 368 VLIAQMVSLFQDGEKVKMSKRTGKAVTMEDLMDEVGVDAIRYFFTMRSMDSHLDFDMDLA 427 Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQL 498 S ENPVFYVQYA+AR S+FRQA++ + P D +L +V+ E E+D + Sbjct: 428 VSTSNENPVFYVQYAHARICSVFRQAEEQGVSLLPLADVNL---SVLTAEHEYD-----I 479 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 + + E P+ + A P++L Y+Y+LAS+FH ++ R V + T Sbjct: 480 LRKMGELPQEVSLAAENYAPHRLIRYVYELASLFHSYY-------RAERVITEDANQTQA 532 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 RL L+ AV ++I + L ++GV +P M Sbjct: 533 RLALLGAVRTVIANVLRLMGVSAPERM 559 >gi|212219516|ref|YP_002306303.1| arginyl-tRNA synthetase [Coxiella burnetii CbuK_Q154] gi|238065085|sp|B6J667|SYR_COXB1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|212013778|gb|ACJ21158.1| arginyl-tRNA synthetase [Coxiella burnetii CbuK_Q154] Length = 592 Score = 357 bits (915), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 211/607 (34%), Positives = 324/607 (53%), Gaps = 61/607 (10%) Query: 11 LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 L ++ + K ++ ++ I I D HG +TN A+ LS+ G+ P +AE IV Sbjct: 15 LNQAIERLKTKGVLKPEVTPVIKITHTTDPQHGDFATNLALTLSKAAGMSPHALAEKIVE 74 Query: 71 RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130 + + V IAG GFIN +++ + ++SSI+ +G +YGR+ +GKG +V++E+VSA Sbjct: 75 ALPPSGQITEVEIAGPGFINFFVTEGSYQTVVSSILKAGKDYGRSEMGKGQRVHMEYVSA 134 Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190 NPTGP+HVGH R A G +A+L+ +G+EV REYY+NDAG Q+ LALSV+ RY Q Y Sbjct: 135 NPTGPLHVGHGRGAAYGACVANLLNAAGFEVHREYYVNDAGRQMGILALSVWVRYLQG-Y 193 Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLN--------FPEE------------KWL 230 +LP+ Y G Y+ + + L KY + + PEE W+ Sbjct: 194 EASIELPKNAYQGEYIIDIAEALKAKYGKQFYHSVESIQAKIPEEIDSNADPEAYLDAWV 253 Query: 231 PIVKDY------------SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 KD ++ +++ I++DL+ ++ +D + E R I++ +D Sbjct: 254 TAQKDLLGPKDFECVFQAALDSILNDIKNDLEEFSVTYDDWFPESRLVR--EGLIQEGLD 311 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 L + GYVYE FR+T +GD+ DR L + +G TYFAAD+ Sbjct: 312 LLTKHGYVYE----------------KNGAQWFRATALGDEKDRVLFRKNGLPTYFAADV 355 Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 AY K+ +G+D +I + G+DH GY+ R+ + + ++++LL + LYR + Sbjct: 356 AYHLHKFNQGYDQIIDIFGADHHGYIPRIRGFLKGLGKAPEKLHILLVQFAILYRGNEKV 415 Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 MS R G F+TLR + EVG+D+ RF + RK + LDFD K QS ENPV+Y+QYA+ Sbjct: 416 SMSTRGGTFVTLRELRHEVGNDAARFFYIMRKPDQHLDFDLELAKSQSNENPVYYIQYAH 475 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 AR S+FRQ K + D PR + E +L+ L YP VI+ A + P Sbjct: 476 ARICSVFRQLKTTQKNWD---RPRGMENLSLLSTNHEKELLATLGRYPEVIKRAAMNYAP 532 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 + LA YL LA+ FH ++ N ++ +N L RL L++AV II +GL ++G Sbjct: 533 HLLAHYLQTLANQFHTYY-----NAERFLIEDDN--LRNARLNLINAVQQIIRNGLTLLG 585 Query: 579 VESPNEM 585 V +P EM Sbjct: 586 VSAPEEM 592 >gi|261403996|ref|YP_003240237.1| arginyl-tRNA synthetase [Paenibacillus sp. Y412MC10] gi|261280459|gb|ACX62430.1| arginyl-tRNA synthetase [Paenibacillus sp. Y412MC10] Length = 559 Score = 356 bits (914), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 209/567 (36%), Positives = 314/567 (55%), Gaps = 39/567 (6%) Query: 24 VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVF 82 V ++ L I +E P+D +HG L+TN AM L+R +P IAE I+ + ++ Sbjct: 27 VSREELPAITLEVPKDKSHGDLATNVAMQLTRIAKKNPRQIAEAILEHLDTAKASIEKAE 86 Query: 83 IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 IAG GFIN L YL I++ + G YGR G+G KV +EFVSANPTG +H+GH R Sbjct: 87 IAGPGFINFTLDKGYLYPIVALVQEQGDNYGRIASGEGQKVQMEFVSANPTGSLHLGHAR 146 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202 A VGD L +++ F+GYEVTREYYINDAG Q+ L S+ RY Q L D+++PE Y Sbjct: 147 GAAVGDALCNVLDFAGYEVTREYYINDAGNQVVNLVKSLEARYLQEL-GQDAEMPEDGYH 205 Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262 G +K KEL + LL+ ++ ++ + ++ + I+ DL + D + SE Sbjct: 206 GEDIKGFAKELVAEKGDSLLSMDPDERTAFLRQFGLEKELGKIKRDLNRFRVHFDEWFSE 265 Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322 + + + ++ L +G YE K T R+T GDD DR Sbjct: 266 TSLY--EDGLVEKSLEELKAKGEAYE------KDGAT----------WLRTTDYGDDKDR 307 Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 L+K+DG+YTY D+AY + KYERG+D ++ + G+DH GYV R++A A+ ++ Sbjct: 308 VLVKNDGTYTYLTPDIAYHRNKYERGYDKILNIWGADHHGYVPRMKAAMEALGNDPDKLI 367 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 VL+ ++V L++DG +KMSKR G +T+ ++DEVG D++R+ R LDFD Sbjct: 368 VLIAQMVSLFQDGEKVKMSKRTGKAVTMEDLMDEVGVDAIRYFFTMRSMDSHLDFDMDLA 427 Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQL 498 S ENPVFYVQYA+AR S+FRQA++ P D +L +V+ E E+D + Sbjct: 428 VSTSNENPVFYVQYAHARICSVFRQAEEQGVSFLPLADVNL---SVLTAEHEYD-----I 479 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 + + E P+ + A P++L Y+Y+LAS+FH ++ R V + T Sbjct: 480 LRKMGELPQEVSLAAENYAPHRLIRYVYELASLFHSYY-------RAERVITEDANQTQA 532 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 RL L+ AV ++I + L ++GV +P M Sbjct: 533 RLALLGAVRTVIANVLRLMGVSAPERM 559 >gi|164685833|ref|ZP_01945807.2| arginyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177'] gi|164601349|gb|EAX33686.2| arginyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177'] Length = 586 Score = 356 bits (914), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 211/607 (34%), Positives = 324/607 (53%), Gaps = 61/607 (10%) Query: 11 LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 L ++ + K ++ ++ I I D HG +TN A+ LS+ G+ P +AE IV Sbjct: 9 LNQAIERLKTKGVLKPEVTPVIKITHTTDPQHGDFATNLALTLSKAAGMSPHALAEKIVE 68 Query: 71 RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130 + + V IAG GFIN +++ + ++SSI+ +G +YGR+ +GKG +V++E+VSA Sbjct: 69 ALPPSGQITEVEIAGPGFINFFVTEGSYQTVVSSILKAGKDYGRSEMGKGQRVHMEYVSA 128 Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190 NPTGP+HVGH R A G +A+L+ +G+EV REYY+NDAG Q+ LALSV+ RY Q Y Sbjct: 129 NPTGPLHVGHGRGAAYGACVANLLNAAGFEVHREYYVNDAGRQMGILALSVWVRYLQG-Y 187 Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLN--------FPEE------------KWL 230 +LP+ Y G Y+ + + L KY + + PEE W+ Sbjct: 188 EASIELPKNAYQGEYIIDIAEALKAKYGKQFYHSVESIQAKIPEEIDSNADPEAYLDAWV 247 Query: 231 PIVKDY------------SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 KD ++ +++ I++DL+ ++ +D + E R I++ +D Sbjct: 248 TAQKDLLGPKDFECVFQAALDSILNDIKNDLEEFSVTYDDWFPESRLVR--EGLIQEGLD 305 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 L + GYVYE FR+T +GD+ DR L + +G TYFAAD+ Sbjct: 306 LLTKHGYVYE----------------KNGAQWFRATALGDEKDRVLFRKNGLPTYFAADV 349 Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 AY K+ +G+D +I + G+DH GY+ R+ + + ++++LL + LYR + Sbjct: 350 AYHLHKFNQGYDQIIDIFGADHHGYIPRIRGFLKGLGKAPEKLHILLVQFAILYRGNEKV 409 Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 MS R G F+TLR + EVG+D+ RF + RK + LDFD K QS ENPV+Y+QYA+ Sbjct: 410 SMSTRGGTFVTLRELRHEVGNDAARFFYIMRKPDQHLDFDLELAKSQSNENPVYYIQYAH 469 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 AR S+FRQ K + D PR + E +L+ L YP VI+ A + P Sbjct: 470 ARICSVFRQLKTTQKNWD---RPRGMENLSLLSTNHEKELLATLGRYPEVIKRAAMNYAP 526 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 + LA YL LA+ FH ++ N ++ +N L RL L++AV II +GL ++G Sbjct: 527 HLLAHYLQTLANQFHTYY-----NAERFLIEDDN--LRNARLNLINAVQQIIRNGLTLLG 579 Query: 579 VESPNEM 585 V +P EM Sbjct: 580 VSAPEEM 586 >gi|332800368|ref|YP_004461867.1| arginyl-tRNA synthetase [Tepidanaerobacter sp. Re1] gi|332698103|gb|AEE92560.1| Arginyl-tRNA synthetase [Tepidanaerobacter sp. Re1] Length = 569 Score = 356 bits (914), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 205/593 (34%), Positives = 328/593 (55%), Gaps = 52/593 (8%) Query: 19 DCKIKVEKKILDRIV---------------------IERPRDCAHGHLSTNAAMILSRPL 57 D K +V++K++D ++ IE P+D HG +TN AMIL+R Sbjct: 3 DLKTQVQQKLMDIVMSALNKAIDDGALPIKDIPDFHIEVPQDKGHGDFATNIAMILAREA 62 Query: 58 GLDPLTIAELIVARIKIDPD--VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115 + P I E+I R+ ++ + +AG GFIN YL P+++ ++S I+ G ++GR Sbjct: 63 KMPPRKIGEVIAERVDTTHSNLIEKIEVAGPGFINFYLVPTWVNAVISDILKYGSDFGRC 122 Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175 G+G KV +EFVSANPTGPMH+G+ R A +GD LAS++ G++VT+E+YINDAG QI Sbjct: 123 NTGEGKKVQVEFVSANPTGPMHMGNARGAALGDALASILEMVGFDVTKEFYINDAGNQIE 182 Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235 LS+ RY + L ++PEG Y G + K+L ++ L + Sbjct: 183 NFGLSLEARYLE-LMGKQGEIPEGGYHGEDIIEHMKDLIEQEGDRFLYMDSPTRRAYFIN 241 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 Y+++ ++ ++ DL+ + D++ SE H + ++I L +GY YE Sbjct: 242 YALEKNIERMKKDLENFGVHFDVWFSEQSLHS--SGKVNEVIKILTDRGYTYE------- 292 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 L F+++ G+ D L++++G TYFA+D+AY K K++RGFD +I + Sbjct: 293 ---------KDGALWFKASQFGETKDEVLIRANGLPTYFASDIAYHKNKFDRGFDWVINI 343 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 G+DH G++ R++ A+ ++ V++ +LVRLYR+G +MSKR G +TL +V+ Sbjct: 344 WGADHHGHIARMKGALEALGYDPDKLTVIIMQLVRLYRNGEIARMSKRTGRAVTLADIVE 403 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 EVG D+ RF R LDFD +QS +NPV+YVQYA+AR SI RQAK+ D+ Sbjct: 404 EVGKDAARFFFNLRSADTHLDFDLDLAIKQSDDNPVYYVQYAHARISSILRQAKEQGVDI 463 Query: 476 -DFDLFPRNVIPQESEF--DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 + + +N + + ++ + SE++LI LA++P I+ A PY++ Y +LAS F Sbjct: 464 PNVNNLTQNDMNKYADLLIEESEIELIKKLADFPGEIKLAADNLAPYRITVYSQELASAF 523 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H ++ R V + + LT RL LV AV +I + L I+G+ +P+ M Sbjct: 524 HSFYNKCR-------VLTDAQDLTTARLLLVMAVQQVIKNALAILGISAPDRM 569 >gi|260655517|ref|ZP_05861005.1| arginine--tRNA ligase [Jonquetella anthropi E3_33 E1] gi|260629965|gb|EEX48159.1| arginine--tRNA ligase [Jonquetella anthropi E3_33 E1] Length = 561 Score = 356 bits (913), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 204/576 (35%), Positives = 312/576 (54%), Gaps = 41/576 (7%) Query: 20 CKIKVEKKI----LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID 75 KI EK I R+ ERP+D +HG +TN AM ++ LG P +AE + + I Sbjct: 17 AKIAQEKGIQLPETCRVEFERPKDESHGDWATNVAMKCAKILGTRPRDLAERLTSLIDDS 76 Query: 76 PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGP 135 + S+ +AG GFIN LS ++ +++ I +G YG++ +G G V +EFVSANPTGP Sbjct: 77 KHIASMEVAGPGFINFRLSNQWMDDLVARIAENGENYGKSSVGAGRSVQVEFVSANPTGP 136 Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS- 194 +HVGH R A VGD + +++AF+G++V +EYY+NDAG QIN LA S+ RY + + Sbjct: 137 LHVGHGRGAAVGDVVGNILAFAGWKVEKEYYVNDAGLQINILAKSILARYFELQGCPEKL 196 Query: 195 ---DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251 D P Y G Y+ + + + ++ +N +++ L ++ + Q +++ I+ DL Sbjct: 197 PFDDAPGAMYKGAYIYDEARRVIEAVGNKFVNSSQDEALAYLRQFGAQHILENIKSDLAR 256 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 ++ + F SE + D +R ++ L GYVYE L + Sbjct: 257 FGVKFNQFFSEKSLYERDL--VRKAVETLREAGYVYE----------------KDGALWY 298 Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371 RST GDD DR L +S G TYFA+D+AY K K++RGFD +I V G DH GYV R+ A Sbjct: 299 RSTDFGDDKDRVLFRSTGEPTYFASDVAYHKEKFDRGFDRVIDVWGCDHHGYVPRINAAL 358 Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431 + + NVLL + V L +DG + MS R G F TL ++DEVG D+ R+ L R++ Sbjct: 359 RGLGKDAGDFNVLLIQFVNLVKDGQIVGMSTRGGKFETLASLLDEVGVDAARYYFLMRRS 418 Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491 LDFD + K +S +NPV+YVQYAYAR S+ R+A++ D+ +P + Sbjct: 419 DSQLDFDMDQAKRESSDNPVYYVQYAYARIASLTRKAQEKNIDMT------KPLPFDGRL 472 Query: 492 DTS--ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549 TS E +L+ L +P +E A EP+ L Y+++L+ FH ++ R + Sbjct: 473 MTSPEEKRLLTALETFPGELERAAAGLEPHLLVTYVHELSGHFHAFYNSCR-------IL 525 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L L LV AV +++ + I+G +P M Sbjct: 526 DEDEPLRSSHLALVQAVRTVLKNCFGILGFSAPERM 561 >gi|161830885|ref|YP_001595968.1| arginyl-tRNA synthetase [Coxiella burnetii RSA 331] gi|189083530|sp|A9N9G2|SYR_COXBR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|161762752|gb|ABX78394.1| arginyl-tRNA synthetase [Coxiella burnetii RSA 331] Length = 586 Score = 356 bits (913), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 211/607 (34%), Positives = 324/607 (53%), Gaps = 61/607 (10%) Query: 11 LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 L ++ + K ++ ++ I I D HG +TN A+ LS+ G+ P +AE IV Sbjct: 9 LNQAIERLKTKGVLKPEVTPVIKITHTTDPQHGDFATNLALTLSKAAGMSPHALAEKIVE 68 Query: 71 RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130 + + V IAG GFIN +++ + ++SSI+ +G +YGR+ +GKG +V++E+VSA Sbjct: 69 ALPPSGQITEVEIAGPGFINFFVTEGSYQTVVSSILKAGKDYGRSEMGKGQRVHMEYVSA 128 Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190 NPTGP+HVGH R A G +A+L+ +G+EV REYY+NDAG Q+ LALSV+ RY Q Y Sbjct: 129 NPTGPLHVGHGRGAAYGACVANLLNAAGFEVHREYYVNDAGRQMGILALSVWVRYLQG-Y 187 Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLN--------FPEE------------KWL 230 +LP+ Y G Y+ + + L KY + + PEE W+ Sbjct: 188 EASIELPKNAYQGEYIIDIAEALKAKYGKQFYHSVESIQAKIPEEIDSNADPEAYLDAWV 247 Query: 231 PIVKDY------------SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 KD ++ +++ I++DL+ + +D + E R I++ +D Sbjct: 248 TAQKDLLGPKDFECVFQAALDSILNDIKNDLEEFGVTYDDWFPESRLVR--EGLIQEGLD 305 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 L + GYVYE FR+T +GD+ DR L++ +G TYFAAD+ Sbjct: 306 LLTKHGYVYE----------------KNGAQWFRATALGDEKDRVLIRKNGLPTYFAADV 349 Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 AY K+ +G+D +I + G+DH GY+ R+ + + ++++LL + LYR + Sbjct: 350 AYHLHKFNQGYDQIIDIFGADHHGYIPRIRGFLKGLGKAPEKLHILLVQFAILYRGNEKV 409 Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 MS R G F+TLR + EVG+D+ RF + RK + LDFD K QS ENPV+Y+QYA+ Sbjct: 410 SMSTRGGTFVTLRELRHEVGNDAARFFYIMRKPDQHLDFDLELAKSQSNENPVYYIQYAH 469 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 AR S+FRQ K + D PR + E +L+ L YP VI+ A + P Sbjct: 470 ARICSVFRQLKTTQKNWD---RPRGMENLSLLSTNYEKELLATLGRYPEVIKRAAMNYAP 526 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 + LA YL LA+ FH ++ N ++ +N L RL L++AV II +GL ++G Sbjct: 527 HLLAHYLQTLANQFHTYY-----NAERFLIEDDN--LRNARLNLINAVQQIIRNGLTLLG 579 Query: 579 VESPNEM 585 V +P EM Sbjct: 580 VSAPEEM 586 >gi|313673413|ref|YP_004051524.1| arginyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672] gi|312940169|gb|ADR19361.1| arginyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672] Length = 542 Score = 355 bits (912), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 213/555 (38%), Positives = 310/555 (55%), Gaps = 38/555 (6%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 IE P+ +G S+N A +LS+ L P+ IA IV+ I + V +A GFIN + Sbjct: 24 TIEIPKKSENGDFSSNVAFVLSKALKQRPIDIANEIVSYID-KKNFSKVEVAPPGFINFF 82 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 LS L +I+ ++ IG K +EFVSANPTGP+H+GH R + GDT+A Sbjct: 83 LSKEPYYNFLKAII-EKPDFHIEKIGNNKKAMVEFVSANPTGPLHIGHGRGSAYGDTIAR 141 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 L+ SG+ V +EYYINDAG Q+N LALS++ RY + L+ D P Y G Y+ + K+ Sbjct: 142 LLNISGFNVYKEYYINDAGNQMNNLALSIYSRYCE-LFGKDYPFPADGYKGEYIIDIAKD 200 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 +A+KY LLN E + I + V+ ++ I DL+ + D + SE + + Sbjct: 201 IAEKYQDNLLN-DEINGIKICFEIGVKTILDGIEADLRDFRVTFDNWFSEKSLY--ESQE 257 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + I+ L + GY+YE L F+S +GDD DR + +S G YT Sbjct: 258 VEKTIELLKKNGYIYE----------------KDNALWFKSEQLGDDKDRVIKRSTGEYT 301 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 YFA+D+AY K K+ERGF+ ++ V G+DH GYV RL+ A+ + + L ++V L Sbjct: 302 YFASDIAYHKNKFERGFEYLVDVWGADHHGYVNRLKNGVKALGIDVENLKIQLIQMVSLI 361 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 + G I MS RAG+FITLR ++DEVG+D+ R+ L R + DFD K +S +NPV+ Sbjct: 362 KGGERISMSTRAGEFITLRWLLDEVGTDAARYFYLMRDINSQFDFDIDLAKSKSNDNPVY 421 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT--SELQLIVHLAEYPRVIE 510 Y+QYA+AR S+ R AK+ +DF I + E T SEL++I L ++ VI+ Sbjct: 422 YIQYAHARVCSLKRNAKE--KGIDFK------ISNDLELLTLPSELEIIKKLYDFKNVIK 473 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 ATI EP+++ +YL DLA +FH ++ + V N+ K T RL L AVA I Sbjct: 474 TATINLEPHRICYYLQDLAGLFHTYYYN------TTIVDENDLKTTNARLSLSEAVAKTI 527 Query: 571 NSGLNIIGVESPNEM 585 + GLNI+GV +P M Sbjct: 528 SLGLNILGVSAPERM 542 >gi|315644448|ref|ZP_07897581.1| arginyl-tRNA synthetase [Paenibacillus vortex V453] gi|315280198|gb|EFU43491.1| arginyl-tRNA synthetase [Paenibacillus vortex V453] Length = 559 Score = 355 bits (912), Expect = 9e-96, Method: Compositional matrix adjust. Identities = 209/567 (36%), Positives = 315/567 (55%), Gaps = 39/567 (6%) Query: 24 VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVF 82 V ++ L I +E P+D +HG L+TNAAM L+R +P IAE I+ + ++ Sbjct: 27 VSREELPAITLEVPKDKSHGDLATNAAMQLTRIAKKNPRQIAEAILEHLDTAKASIEKAE 86 Query: 83 IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 IAG GFIN L YL I++ + G YGR IG+G KV +EFVSANPTG +H+GH R Sbjct: 87 IAGPGFINFTLDKGYLYPIVALVQEQGDNYGRITIGEGQKVQMEFVSANPTGSLHLGHAR 146 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202 A VGD L +++ ++GYEVTREYYINDAG Q+ L S+ RY Q L D+++PE Y Sbjct: 147 GAAVGDALCNVLDYAGYEVTREYYINDAGNQVVNLIKSLEARYLQEL-GQDAEMPEDGYH 205 Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262 G +K KEL + LL+ + +++ ++ + I+ DL + D + SE Sbjct: 206 GEDIKGFAKELVAEKGDSLLSMSPGERTAFFREFGLEKELGKIKRDLNRFRVHFDEWFSE 265 Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322 + + + ++ L +G YE K T R+T GDD DR Sbjct: 266 TSLY--EDGLVEKSLEELRSKGEAYE------KDGAT----------WLRTTDYGDDKDR 307 Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 L+K+DG+YTY D+AY + KYERG+D ++ + G+DH GYV R++A A+ ++ Sbjct: 308 VLVKNDGTYTYLTPDIAYHRNKYERGYDKILNIWGADHHGYVPRMKAAMEALGNDPDKLI 367 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 VL+ ++V L++DG +KMSKR G +T+ ++DEVG D++R+ R LDFD Sbjct: 368 VLIAQMVSLFQDGEKVKMSKRTGKAVTMEDLMDEVGVDAIRYFFTMRSMDSHLDFDMDLA 427 Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQL 498 S ENPVFYVQYA+AR S+FRQA++ + P + +L +V+ E E+D + Sbjct: 428 VSTSNENPVFYVQYAHARICSVFRQAEEQGINLLPLAEVNL---SVLTAEHEYD-----I 479 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 + + E P+ + A P++L Y+Y+LAS FH ++ R V + T Sbjct: 480 LRKIGELPQEVSLAADNYAPHRLIRYVYELASSFHSYY-------RAERVITEDADQTQA 532 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 RL L+ AV ++I + L ++GV +P M Sbjct: 533 RLALLGAVRTVIANVLRLMGVSAPERM 559 >gi|298530549|ref|ZP_07017951.1| arginyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1] gi|298509923|gb|EFI33827.1| arginyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1] Length = 551 Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 203/584 (34%), Positives = 345/584 (59%), Gaps = 48/584 (8%) Query: 11 LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA----E 66 ++ +L+E+ ++ + K D+ IE PR+ + G L+ N AM+L+ G P +A + Sbjct: 7 VEKHLREVVHELGL--KWPDKASIETPREKSFGDLACNLAMLLAGQAGEKPRDLAARFKD 64 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 +++ R + + S+ IAG GF+N PS+ + I+ I +G + +G+ K+ +E Sbjct: 65 MMLGRAE---KLQSIEIAGPGFLNFTFKPSFWQSIIPVIQKEQEGFGSSDLGRKHKIQVE 121 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 +VSANPTGP+H+GH R A +GD+LA ++ F+G+E + EYY+NDAG Q+ L SV RY+ Sbjct: 122 YVSANPTGPLHIGHGRGAALGDSLARILRFAGFEASTEYYLNDAGRQMYVLGDSVLIRYE 181 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 Q L +++L +Y G YL+ + L ++ +LL E + + ++ +VQ+++ I+ Sbjct: 182 Q-LCGLEAELSPDHYQGEYLQDDARALYQEHGRDLLKQDRESAIALCREKAVQSILAGIK 240 Query: 247 DDLKALNIQHDIFISEDD-FHRGDPSPIRDIIDNLARQ--GYVYEGILPPPKSKTTQKCD 303 +DL+ ++H ++ SE F RG+ ++ ++ L + Y+++G L Sbjct: 241 EDLEHFGVEHQVWFSEQGLFDRGE---VQKTLEWLQEKDMAYIHDGAL------------ 285 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 FRST GDD DR L KSDG+ TYFA+D+AY K+ RGF+ ++ + G+DH GY Sbjct: 286 ------WFRSTSFGDDKDRVLQKSDGALTYFASDIAYHHNKFNRGFETVVDIWGADHHGY 339 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 R++A A+ + V+L +LV L R G + MS R+G+F+TLR V++EVG D+ R Sbjct: 340 APRMQAAVQALGRPAGSLRVILVQLVNLLRAGQQVSMSTRSGEFVTLRQVMEEVGVDACR 399 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 F+ L RK+ LDFD +VK++S +NPVFYVQYA+AR S+F +A + +D P++ Sbjct: 400 FIFLSRKSDSHLDFDLEEVKKKSMDNPVFYVQYAHARICSVFAKAAE--RGIDTGPEPQS 457 Query: 484 VIP-QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS-HGRE 541 ++ ES+ D L L+ L +P +++ A P+ ++FYL +LA + H +++ H Sbjct: 458 LLHLLESQED---LDLLKQLEMFPDMVQAAARNLSPHHISFYLRELAGLLHRYYTVHSVL 514 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N A++R+L R+ L+ A A ++++GL ++GV +P +M Sbjct: 515 N-------ADSRELIHARMLLLQATARVLSNGLKLLGVHAPEKM 551 >gi|297585470|ref|YP_003701250.1| arginyl-tRNA synthetase [Bacillus selenitireducens MLS10] gi|297143927|gb|ADI00685.1| arginyl-tRNA synthetase [Bacillus selenitireducens MLS10] Length = 555 Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 198/552 (35%), Positives = 308/552 (55%), Gaps = 37/552 (6%) Query: 37 PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSP 95 P+D +HG ++N AM L+R P IAE I A + ++ V++V IAG GF+N + Sbjct: 38 PKDKSHGDYASNLAMQLARVAKKAPKQIAEDIQANLDLEAASVETVEIAGPGFLNFTMKK 97 Query: 96 SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155 YL ++ +++ ++G +G G K+ +EFVSANPTG +H+GH R A VGD L ++ Sbjct: 98 DYLADVVKAVLAKQDDFGSTDVGNGKKIQVEFVSANPTGTLHLGHARGAAVGDALCHILD 157 Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215 +GY+VTREYYINDAG QI+ LALS+ RY QAL ++D+PE Y G + +EL D Sbjct: 158 KAGYDVTREYYINDAGNQIDNLALSLEARYLQAL-GEEADMPEDGYQGKDIIGFAEELVD 216 Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275 Y + +++ ++ + +++DL + D++ SE + + + + Sbjct: 217 TYGDRFKDADPANRQAFFREFGLKRELDKLKNDLNDYRVHFDVWFSETSVY--ENGQVEE 274 Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335 I+++L + YE FRST GDD DR L+K DGSYTY Sbjct: 275 ILEDLKARDKTYE----------------HEGATWFRSTDYGDDKDRVLVKGDGSYTYLT 318 Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395 D+AY K++RGFD +I + G+DH GY+ R++A A+ + Q++V + ++V L+ +G Sbjct: 319 PDIAYHNDKFKRGFDEVINIWGADHHGYIARMKAAVQALGYDEEQLSVQIIQMVNLFENG 378 Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455 +KMSKR G +T+R +++EVG D+ R+ R LDFD K QS ENPVFYVQ Sbjct: 379 EKVKMSKRTGKAVTMRELMEEVGIDATRYFFAMRAADTHLDFDLDLAKSQSNENPVFYVQ 438 Query: 456 YAYARCRSIFRQAKD--IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513 YA+AR S+ RQAK+ PD DL + E E D L+ L E+P + +A Sbjct: 439 YAHARICSMIRQAKEKGFEPDPSADL---TKLTSEKEHD-----LMKKLGEFPEAVADAA 490 Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573 + P+++ Y+++LA H ++ + V ++ LT RL LV AV + +G Sbjct: 491 SRRLPHRITNYVHELAQALHSFYNADK-------VITDDEALTKARLALVEAVRITLRNG 543 Query: 574 LNIIGVESPNEM 585 L+++GV +P +M Sbjct: 544 LSLVGVSAPEKM 555 >gi|54294929|ref|YP_127344.1| arginyl-tRNA synthetase [Legionella pneumophila str. Lens] gi|81368288|sp|Q5WV09|SYR_LEGPL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|53754761|emb|CAH16248.1| arginine tRNA synthetase [Legionella pneumophila str. Lens] Length = 589 Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 205/586 (34%), Positives = 330/586 (56%), Gaps = 61/586 (10%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E +D AHG +TN A++L++P P +AE +VA I DP V+ + IAG GFIN Sbjct: 33 IKVENAKDPAHGDYATNLALVLAKPCRQAPKVLAERLVAVIPADPSVEKIEIAGAGFINF 92 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 ++ + I+S I+ G E+G+ +G+ KV IEFVSANPTGP+HVGH R A G TL Sbjct: 93 FMRSTARSLIISEILNKGKEFGQGNLGQSQKVLIEFVSANPTGPLHVGHGRGAAFGATLG 152 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ +GY+VT EYY+NDAG Q+N LA+SV+ RY + L P Y G Y+ + + Sbjct: 153 NVLKAAGYDVTLEYYVNDAGRQMNILAVSVWLRYLE-LAGEPIAFPANGYKGQYVYEIAQ 211 Query: 212 ELADKYSSELL--------NFP--------EEKWLPIV---------KD-------YSVQ 239 E+ + ++ + N P +E ++ + KD ++++ Sbjct: 212 EMWSEQGNQFVHPWISVVDNLPADEPEGGDKETYIDAIIARAQSLLGKDGFANFHQHALK 271 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 ++ I+DDL+A ++ D + SE + I I L +G+ YE Sbjct: 272 TVLDDIKDDLQAFGVRFDSWFSEQSLF--EDGSIGKGIQALKDRGHTYE----------- 318 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 L FR+T GD+ DR L++++G TYFA+D+AY KY+RGFD +I + G+D Sbjct: 319 -----REGALWFRATDFGDEKDRVLVRANGQTTYFASDVAYHWNKYDRGFDRVIDIFGAD 373 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYV R++ A+ ++ ++V+L + LYR G ++MS R+G F+TLR + +EVG+ Sbjct: 374 HHGYVTRIKTAVKALGHDESALDVILVQFAILYRGGDRVQMSTRSGSFVTLRELREEVGN 433 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + RK + +DFD K +S +NPV+Y+QYA+AR S+ RQ K+ D D+ Sbjct: 434 DAARYFYVARKPEQHMDFDLDLAKSESSDNPVYYIQYAHARICSVLRQLKERGLKWDKDM 493 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 +N+ E + + + + LI A YP VI++A + EP++LA+YL +LA+ H +++ Sbjct: 494 GLKNLDLLEQQHEATLISLI---ARYPEVIQSAAASCEPHQLAYYLRELANGLHSYYNAI 550 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +L RL L+ +V ++N+GL I+GV +P M Sbjct: 551 Q-------LLCEQEQLRCARLCLLESVRQVLNNGLAILGVSAPESM 589 >gi|323702604|ref|ZP_08114266.1| arginyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574] gi|323532423|gb|EGB22300.1| arginyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574] Length = 561 Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 208/561 (37%), Positives = 312/561 (55%), Gaps = 43/561 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFIN 90 IVIE PR+ HG +TN AM L+R + P IAE +V + + V V IAG GFIN Sbjct: 37 IVIEVPREKEHGDFATNLAMQLARSAKMAPRKIAEAVVENLDLAGTRVARVEIAGPGFIN 96 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL PS++ ++ IV YGR +G G KV +EFVSANPTG +H+G+ R A +GD+L Sbjct: 97 FYLEPSWVYDVVPLIVQEDRNYGRVELGNGRKVQVEFVSANPTGLLHMGNARGAALGDSL 156 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+++ F+GY V+REYYINDAG QI S+ RY Q L D +PE Y G + Sbjct: 157 AAILDFAGYRVSREYYINDAGNQIENFGRSLEVRYLQQL-GQDIPMPEEGYHGEDIIDTV 215 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K +K+ L+N + Y+++ + IR+ L + +D++ SE H D Sbjct: 216 KGYLNKHGDGLVNVDSATRRQTLAAYALKEKLTHIRNTLLDFGVVYDVWFSEQSLH--DS 273 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I I+ L +GY+YE L F++T GD+ D +++S+G Sbjct: 274 GAIDRTINELRERGYIYE----------------HENALWFKATEFGDEKDEVVVRSNGI 317 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFAAD+AY + K+ERGFD +I + G+DH G+V R++ A+ + ++ V+L +LVR Sbjct: 318 PTYFAADIAYHRNKFERGFDWVIDIWGADHHGHVNRMKGSMEALGYSRDKLEVILMQLVR 377 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L+R G ++MSKR G F+TL +++EVG D+ R+ + R LDFD K Q+ +NP Sbjct: 378 LFRGGEIVRMSKRTGQFVTLEELMEEVGRDAARYFFVMRSPDSHLDFDLDLAKSQTNDNP 437 Query: 451 VFYVQYAYARCRSIFRQAKD------IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 VFY+QYA+AR SI RQ ++ D+D L + +EL L+ LA+ Sbjct: 438 VFYIQYAHARICSILRQLQEQGRQLPAAADVDLTLLK----------EEAELGLLRKLAD 487 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 +P I A P+++A YL+DLA FH ++ R V +N +L+ RL LV+ Sbjct: 488 FPTEIAAAAELLAPHRIARYLHDLAGQFHSFYNSYR-------VITDNEELSQARLVLVN 540 Query: 565 AVASIINSGLNIIGVESPNEM 585 V ++ + L ++G+ +P +M Sbjct: 541 CVRIVLRNALGLLGLTAPEKM 561 >gi|121535669|ref|ZP_01667474.1| arginyl-tRNA synthetase [Thermosinus carboxydivorans Nor1] gi|121305773|gb|EAX46710.1| arginyl-tRNA synthetase [Thermosinus carboxydivorans Nor1] Length = 556 Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 209/562 (37%), Positives = 311/562 (55%), Gaps = 45/562 (8%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +++E P G +TN AM +R +P IA+ IV RI+ P ++ IAG GFIN Sbjct: 32 VMLEVPPQKEFGDYATNFAMQAARAAKTNPRVIAQAIVDRIQA-PWLEKAVIAGPGFINF 90 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 YL P +L +L I+ +G YG G+G +V +EFVSANPTGP+HVGH R A VG L Sbjct: 91 YLKPGWLYDLLQRILAAGENYGNTDYGRGRRVQVEFVSANPTGPLHVGHGRGAAVGSALV 150 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +L+ +GY+V E+YINDAG+QI+ LA SV RY + L + PE Y G + + Sbjct: 151 NLLRAAGYDVEAEFYINDAGSQIDHLAASVNARYLE-LLGQPVEFPEDGYRGRDIIDTAQ 209 Query: 212 ELADKYSSE-LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 + D+ + LL P E+ L + K+ ++ + +R+DL+A + D++ SE H+ Sbjct: 210 RIIDREGARYLLVSPAER-LAVFKELALSEKLAALREDLEAFGVTFDVWFSERTLHQ--T 266 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I + L + G +YE L RST GDD DR +++ +G Sbjct: 267 GAIAATCELLKKSGDIYE----------------QDGALWLRSTAYGDDKDRVVIRDNGV 310 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TY AAD+AY + K+ERGFD +I + G+DH GY+ R++A AA+ A++ VL+ ++V Sbjct: 311 PTYLAADIAYHRNKFERGFDTVINIWGADHHGYIARVKAAIAALGYDPARLEVLILQMVS 370 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 LY++G +KMSKR G +TL +++EVG D+ RF + R LDFD K ++ ENP Sbjct: 371 LYQNGELVKMSKRTGQGVTLAELIEEVGRDAARFFFIMRSADSQLDFDLDLAKSRTNENP 430 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT-------SELQLIVHLA 503 V+Y+QYA+AR SIFRQA++ V P+E D +E+ LI L Sbjct: 431 VYYIQYAHARIASIFRQAEEA---------GIAVRPEEWTEDKLACLTAETEIDLIKKLG 481 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 EYP I A + P+++A Y++DLA +FH ++ R + L RL LV Sbjct: 482 EYPDEITAAARERAPHRIARYVHDLAGLFHAFYNQCR-------IIGVEPALQNARLGLV 534 Query: 564 HAVASIINSGLNIIGVESPNEM 585 AV ++ L+I+GV +P +M Sbjct: 535 TAVQRVLRHALSILGVTAPEKM 556 >gi|29655291|ref|NP_820983.1| arginyl-tRNA synthetase [Coxiella burnetii RSA 493] gi|39932160|sp|Q83A98|SYR_COXBU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|29542563|gb|AAO91497.1| arginyl-tRNA synthetase [Coxiella burnetii RSA 493] Length = 592 Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 211/607 (34%), Positives = 324/607 (53%), Gaps = 61/607 (10%) Query: 11 LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 L ++ + K ++ ++ I I D HG +TN A+ LS+ G+ P +AE IV Sbjct: 15 LNQAIERLKTKGVLKPEVTPVIKITHTTDPQHGDFATNLALTLSKAAGMSPHALAEKIVE 74 Query: 71 RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130 + + V IAG GFIN +++ + ++SSI+ +G +YGR+ +GKG +V++E+VSA Sbjct: 75 ALPPSGQITEVEIAGPGFINFFVTEGSYQTVVSSILKAGKDYGRSEMGKGQRVHMEYVSA 134 Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190 NPTGP+HVGH R A G +A+L+ +G+EV REYY+NDAG Q+ LALSV+ RY Q Y Sbjct: 135 NPTGPLHVGHGRGAAYGACVANLLNAAGFEVHREYYVNDAGRQMGILALSVWVRYLQG-Y 193 Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLN--------FPEE------------KWL 230 +LP+ Y G Y+ + + L KY + + PEE W+ Sbjct: 194 EASIELPKNAYQGEYIIDIAEALKAKYGKQFYHSVESIQAKIPEEIDSNADPEAYLDVWV 253 Query: 231 PIVKDY------------SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 KD ++ +++ I++DL+ + +D + E R I++ +D Sbjct: 254 TAQKDLLGPKDFECVFQAALDSILNDIKNDLEEFGVTYDDWFPESRLVR--EGLIQEGLD 311 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 L + GYVYE FR+T +GD+ DR L++ +G TYFAAD+ Sbjct: 312 LLTKHGYVYE----------------KNGAQWFRATALGDEKDRVLIRKNGLPTYFAADV 355 Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 AY K+ +G+D +I + G+DH GY+ R+ + + ++++LL + LYR + Sbjct: 356 AYHLHKFNQGYDQIIDIFGADHHGYIPRIRGFLKGLGKAPEKLHILLVQFAILYRGNEKV 415 Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 MS R G F+TLR + EVG+D+ RF + RK + LDFD K QS ENPV+Y+QYA+ Sbjct: 416 SMSTRGGTFVTLRELRHEVGNDAARFFYIMRKPDQHLDFDLELAKSQSNENPVYYIQYAH 475 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 AR S+FRQ K + D PR + E +L+ L YP VI+ A + P Sbjct: 476 ARICSVFRQLKTTQKNWD---RPRGMENLSLLSTNYEKELLATLGRYPEVIKRAAMNYAP 532 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 + LA YL LA+ FH ++ N ++ +N L RL L++AV II +GL ++G Sbjct: 533 HLLAHYLQTLANQFHTYY-----NAERFLIEDDN--LRNARLNLINAVQQIIRNGLTLLG 585 Query: 579 VESPNEM 585 V +P EM Sbjct: 586 VSAPEEM 592 >gi|209364278|ref|YP_001425414.2| arginyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111] gi|254783049|sp|A9KH27|SYR_COXBN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|207082211|gb|ABS77583.2| arginyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111] Length = 592 Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 211/607 (34%), Positives = 324/607 (53%), Gaps = 61/607 (10%) Query: 11 LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 L ++ + K ++ ++ I I D HG +TN A+ LS+ G+ P +AE IV Sbjct: 15 LNQAIERLKTKGVLKPEVTPVIKITHTTDPQHGDFATNLALTLSKAAGMRPHALAEKIVE 74 Query: 71 RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130 + + V IAG GFIN +++ + ++SSI+ +G +YGR+ +GKG +V++E+VSA Sbjct: 75 ALPPSGQITEVEIAGPGFINFFVTEGSYQTVVSSILKAGKDYGRSEMGKGQRVHMEYVSA 134 Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190 NPTGP+HVGH R A G +A+L+ +G+EV REYY+NDAG Q+ LALSV+ RY Q Y Sbjct: 135 NPTGPLHVGHGRGAAYGACVANLLNAAGFEVHREYYVNDAGRQMGILALSVWVRYLQG-Y 193 Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLN--------FPEE------------KWL 230 +LP+ Y G Y+ + + L KY + + PEE W+ Sbjct: 194 EASIELPKNAYQGEYIIDIAEALKAKYGKQFYHSVESIQAKIPEEIDSNADPEAYLDAWV 253 Query: 231 PIVKDY------------SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 KD ++ +++ I++DL+ + +D + E R I++ +D Sbjct: 254 TAQKDLLGPKDFECVFQAALDSILNDIKNDLEEFGVTYDDWFPESRLVR--EGLIQEGLD 311 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 L + GYVYE FR+T +GD+ DR L++ +G TYFAAD+ Sbjct: 312 LLTKHGYVYE----------------KNGAQWFRATALGDEKDRVLIRKNGLPTYFAADV 355 Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 AY K+ +G+D +I + G+DH GY+ R+ + + ++++LL + LYR + Sbjct: 356 AYHLHKFNQGYDQIIDIFGADHHGYIPRIRGFLKGLGKAPEKLHILLVQFAILYRGNEKV 415 Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 MS R G F+TLR + EVG+D+ RF + RK + LDFD K QS ENPV+Y+QYA+ Sbjct: 416 SMSTRGGTFVTLRELRHEVGNDAARFFYIMRKPDQHLDFDLELAKSQSNENPVYYIQYAH 475 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 AR S+FRQ K + D PR + E +L+ L YP VI+ A + P Sbjct: 476 ARICSVFRQLKTTQKNWD---RPRGMENLSLLSTNYEKELLATLGRYPEVIKRAAMNYAP 532 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 + LA YL LA+ FH ++ N ++ +N L RL L++AV II +GL ++G Sbjct: 533 HLLAHYLQTLANQFHTYY-----NAERFLIEDDN--LRNARLNLINAVQQIIRNGLTLLG 585 Query: 579 VESPNEM 585 V +P EM Sbjct: 586 VSAPEEM 592 >gi|167465619|ref|ZP_02330708.1| arginyl-tRNA synthetase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 557 Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 206/547 (37%), Positives = 309/547 (56%), Gaps = 48/547 (8%) Query: 13 NYLKEIDCKIKVEKKILDRIV--------------IERPRDCAHGHLSTNAAMILSRPLG 58 N L E+ K V+K I D +V +E P+D AHG +TN AM L+R Sbjct: 2 NVLNEV--KTSVKKAIADAVVSAGIVDIEQLPAVTLEVPKDKAHGDFATNIAMQLTRIAK 59 Query: 59 LDPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117 +P IAE ++A + + +D V IAG GFIN ++ SYL +++ ++ G YG+ + Sbjct: 60 QNPRQIAEKLIAHLDKEAAYIDEVEIAGPGFINFRMNKSYLYQVIGQVLEQGNSYGKINM 119 Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 GKG +V +EFVSANPTG +H+GH R A VGD L +++ +G EVTREYYINDAG Q+ L Sbjct: 120 GKGKRVQVEFVSANPTGSLHLGHARGAAVGDALCNVLEMAGCEVTREYYINDAGNQVLNL 179 Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237 A S+ RY+QAL ++++PE Y G +K +ELA LL +E+ L + Y Sbjct: 180 AKSIEARYRQAL-GQEAEMPEDGYYGEDIKGFAEELAKAEGDRLLALNDEERLVFFRKYG 238 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 ++ + I+ DL ++ D + SE + + + I D++ L G+V+E Sbjct: 239 LEKELDKIKRDLGRFGVKFDEWFSETSIY--ENNMIDDVLKQLKDNGHVFE--------- 287 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 R+T GDD DR L+K+DG+YTY D+AY + KYERG+D +I + G Sbjct: 288 -------QDGATWLRTTDYGDDKDRVLIKNDGTYTYLTPDVAYHRNKYERGYDEIINIWG 340 Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 +DH GY+ R++A A+ ++ VL+ ++V L+++G +KMSKR G +T+ ++DEV Sbjct: 341 ADHHGYIPRMKAAVTALGYDANKLTVLIAQMVSLFQNGEKVKMSKRTGKAVTMEDLMDEV 400 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD----IFP 473 G D++R+ R LDFD +S ENPVFYVQYA+AR SIFRQA++ + P Sbjct: 401 GVDAIRYFFTMRSMDSHLDFDMDLAISKSNENPVFYVQYAHARICSIFRQAEEQGISMLP 460 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 DL + + E+EFD L+ +AE P + A P++L Y+Y+LAS FH Sbjct: 461 AGQADL---SRLTAEAEFD-----LLRKMAELPEEVAIAAEQYAPHRLIRYVYELASQFH 512 Query: 534 GHWSHGR 540 ++ R Sbjct: 513 SYYKAER 519 >gi|169826545|ref|YP_001696703.1| arginyl-tRNA synthetase [Lysinibacillus sphaericus C3-41] gi|168991033|gb|ACA38573.1| Arginyl-tRNA synthetase [Lysinibacillus sphaericus C3-41] Length = 556 Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 195/555 (35%), Positives = 316/555 (56%), Gaps = 33/555 (5%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFIN 90 I +E P+D A+G +TN AM L++ P IAE I+ + D++ + IAG GF+N Sbjct: 34 IHLETPKDKANGDYATNIAMQLTKLAKKPPRAIAEAILENLDTAGTDIEKIDIAGPGFMN 93 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + + +L +++ ++ G +YGR+ G G K+ IEFVSANPTG +H+GH R A VGD+L Sbjct: 94 ITVRKDFLTGVVTQVLEQGNDYGRSNAGAGEKIQIEFVSANPTGDLHLGHARGASVGDSL 153 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +++ +GY V+REYYINDAG QIN LA S+ RY+QAL D+++PE Y G + + Sbjct: 154 CNVLDMAGYSVSREYYINDAGNQINNLAYSLEARYKQAL-GLDAEMPEDGYHGPDIIEIA 212 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 +LA ++ +L +E+ + + + + ++ DL + D++ SE + + Sbjct: 213 GKLAKEHGDAILAKSDEERFAFFRQHGLALELDKLKTDLANFRVNFDVWYSETSLY--EN 270 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I +D L G+V+E + FRST GDD DR L+K+DGS Sbjct: 271 GKIEVALDKLKANGHVFE----------------EDGATWFRSTTFGDDKDRVLIKNDGS 314 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 +TY D+AY + K RGFD +I + G+DH GY+ R++A A+ + + V + ++V+ Sbjct: 315 FTYLTPDIAYHEDKIVRGFDKLINIWGADHHGYIPRMKAAIQALGYDRDTLEVEVIQMVQ 374 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 LY++G KMSKR G+ +T+R +V+EVG D+VR+ + +DFD QS ENP Sbjct: 375 LYKNGEKFKMSKRTGNAVTMRELVEEVGLDAVRYFFVKTAGDSHMDFDLDLAVSQSNENP 434 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+Y QYA+AR SI R A + F N+ +E E+ L+ + ++P+V+ Sbjct: 435 VYYAQYAHARISSILRSAN----EQGFAATSENLTLLTAE---KEIDLLKKIGDFPQVVA 487 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A + P+++A Y+ + A+ FH ++ + + A+N++LT RL L+ AV + I Sbjct: 488 DAAKHRTPHRIANYIQETAAAFHSFYN------AEKVLDASNKELTEARLALITAVRTTI 541 Query: 571 NSGLNIIGVESPNEM 585 + L +IGV +P +M Sbjct: 542 ANALRLIGVSAPEKM 556 >gi|163783161|ref|ZP_02178155.1| arginyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1] gi|159881495|gb|EDP75005.1| arginyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1] Length = 581 Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 217/612 (35%), Positives = 334/612 (54%), Gaps = 83/612 (13%) Query: 23 KVEKKILDRI-----------VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVAR 71 ++EKKI D I +E+PRD HG L+TN A +LSR L P IA + Sbjct: 4 QLEKKIQDAIRRLFSVEPPQFKVEKPRDEKHGDLATNVAFLLSRELKRAPNDIASQLAEE 63 Query: 72 IKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131 + D D++ A +GF+N+ S + + S ++ G EY R +G G K+ +EFVSAN Sbjct: 64 LSRDADLEGA-EAVRGFVNVRFSREFFTEEFSKLLREGEEYYRENLGGGMKIQLEFVSAN 122 Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 PTGP+H+GH R AVVGDTLA L F GY VTREYYINDAG Q+ L +SV +RY + L+ Sbjct: 123 PTGPLHLGHGRGAVVGDTLARLFRFYGYNVTREYYINDAGRQVYLLGVSVLFRYLE-LFG 181 Query: 192 NDSDLPE-------GYYPGVYLKHVGKELADKYSSELLNFPEE----------------- 227 + D PE Y G Y+ + + L + LL E Sbjct: 182 REKDRPEIKELFEKEGYKGQYVVELARLLREAVGELLLKGEVEEARKKILSHGYSFELGY 241 Query: 228 --KWLP-------IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 K+ P + + + AMM IR DL ++I+ D++ SE + + + ++I+ Sbjct: 242 IKKYRPNREPDVELCAAFGLDAMMDEIRRDLSEMDIEFDVWYSERSLY--ERGLVDELIE 299 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 + +G VYE + L +++ GDD DR L KSDGSYTYFA+D+ Sbjct: 300 EFSSRGLVYE----------------EEGALWLKTSEFGDDKDRVLRKSDGSYTYFASDI 343 Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 AY K++RGF+ ++ + G+DH GY+ R++A + + + V L ++V+L+++G + Sbjct: 344 AYHWDKFKRGFEKVLDLWGADHHGYIPRVKASLKMLGIPEDWLEVYLIQMVKLFKEGKEV 403 Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 KMSKRAG+F+TLR +VDEVG+D+VR + L +++ LDFD +VKE+S ENPVFYVQYA+ Sbjct: 404 KMSKRAGNFVTLRELVDEVGADAVRLVFLTKRSDTPLDFDVDRVKEKSSENPVFYVQYAH 463 Query: 459 ARCRSIFRQ-----AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513 AR +FR+ KD + DF F + + + +EL+L+ + + + T Sbjct: 464 ARISGVFREFRERTGKDPEKE-DFSEFLKELK------EDAELKLMRKVLMMKDELMDVT 516 Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573 + ++P+ + + L DLA FH +++H R + ++ L R+ L+ + S I Sbjct: 517 LKRDPHLITYALIDLAGTFHNYYNHHR-------IIGSDHNLMFGRIALLKGIRSAIRIS 569 Query: 574 LNIIGVESPNEM 585 L +IGV +P +M Sbjct: 570 LKLIGVSAPEKM 581 >gi|313894766|ref|ZP_07828326.1| arginine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430] gi|312976447|gb|EFR41902.1| arginine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430] Length = 553 Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 211/557 (37%), Positives = 299/557 (53%), Gaps = 39/557 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 IV+E P + G ++TN AM +R P IAE+IV+ + D ++ IAG GFINL Sbjct: 33 IVLEEPPEKDMGDVATNFAMQSARVFRKSPKAIAEIIVSYLTGDW-LEHTEIAGPGFINL 91 Query: 92 YLSPSYLRKILSSIVVSGIEYGR-NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL PS +L ++V+G YG+ +V +E+VSANPTGP+HVGH R A VG L Sbjct: 92 YLKPSVYADMLRGVLVAGEAYGQLPARADAPRVQVEYVSANPTGPLHVGHGRGAAVGSAL 151 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 L+ +GY V EYY+NDAG Q+N LA+SV RY + L PE Y G + Sbjct: 152 VKLLRAAGYAVDSEYYVNDAGNQMNLLAVSVNARYLE-LLGQAVTFPENGYHGADITETA 210 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 + + DK + L PEE+ L I +D + + + +++DL + D + SE H P Sbjct: 211 RRIIDKDGDKYLALPEEERLRIFQDVAYREKLAALKEDLADFGVTFDRWFSERTLH---P 267 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ--LLFRSTMVGDDVDRPLLKSD 328 +R +D L +G Y RK + RST GDD DR + + + Sbjct: 268 DAVRRAVDELLARGTAY------------------RKDGAVWLRSTDYGDDKDRVIFRDN 309 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 G TY AAD+AY KY RG+ +I + G+DH GYV R++A AA+ AQ+ VL ++ Sbjct: 310 GVPTYLAADIAYHDDKYRRGYGRLINIWGADHHGYVARVKAAMAALGHDPAQLTVLFLQM 369 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V LYRDG +K+SKR G+ +TLR +++EVG D+ R+ + R LDFD K++S E Sbjct: 370 VSLYRDGDLVKLSKRTGETVTLRELMEEVGVDAARYFFIMRSLDSQLDFDLDLAKKRSNE 429 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 NPV+YVQYA+AR SIFRQA ++ L P + + +E+ LI LA YP Sbjct: 430 NPVYYVQYAHARISSIFRQAGEL------GLMPADGAELSLLKEDTEIALIKKLAAYPEE 483 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 I A P ++A Y Y+LA FH ++ R + + L RL LV A Sbjct: 484 IARAAAEYAPQRIARYSYELAGAFHSFYNQCR-------IVGQEKPLASARLALVTATRH 536 Query: 569 IINSGLNIIGVESPNEM 585 +I L I+GV +P +M Sbjct: 537 VIRHSLGILGVSAPEQM 553 >gi|322382230|ref|ZP_08056143.1| arginyl-tRNA synthetase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153811|gb|EFX46179.1| arginyl-tRNA synthetase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 555 Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 198/517 (38%), Positives = 299/517 (57%), Gaps = 32/517 (6%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKG 87 L + +E P+D AHG +TN AM L+R +P IAE ++A + + +D V IAG G Sbjct: 28 LPAVTLEVPKDKAHGDFATNIAMQLTRIAKQNPRQIAEKLIAHLDKEAAYIDEVEIAGPG 87 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FIN ++ SYL +++ ++ G YG+ +GKG +V +EFVSANPTG +H+GH R A VG Sbjct: 88 FINFRMNKSYLYQVIGQVLEQGNSYGKINMGKGKRVQVEFVSANPTGSLHLGHARGAAVG 147 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D L +++ +G EVTREYYINDAG Q+ LA S+ RY+QAL ++++PE Y G +K Sbjct: 148 DALCNVLEMAGCEVTREYYINDAGNQVLNLAKSIEARYRQAL-GQEAEMPEDGYYGEDIK 206 Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 +ELA LL +E+ L + Y ++ + I+ DL ++ D + SE + Sbjct: 207 GFAEELAKAEGDRLLALNDEERLVFFRKYGLEKELDKIKRDLGRFGVKFDEWFSETSIY- 265 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 + + I D++ L G+V+E R+T GDD DR L+K+ Sbjct: 266 -ENNMIDDVLKQLKDNGHVFE----------------QDGATWLRTTDYGDDKDRVLIKN 308 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387 DG+YTY D+AY + KYERG+D +I + G+DH GY+ R++A A+ ++ VL+ + Sbjct: 309 DGTYTYLTPDVAYHRNKYERGYDEIINIWGADHHGYIPRMKAAVTALGYDANKLTVLIAQ 368 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 +V L+++G +KMSKR G +T+ ++DEVG D++R+ R LDFD +S Sbjct: 369 MVSLFQNGEKVKMSKRTGKAVTMEDLMDEVGVDAIRYFFTMRSMDSHLDFDMDLAISKSN 428 Query: 448 ENPVFYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503 ENPVFYVQYA+AR SIFRQA++ + P DL + + E+EFD L+ +A Sbjct: 429 ENPVFYVQYAHARICSIFRQAEEQGISMLPAGQADL---SRLTAEAEFD-----LLRKMA 480 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 E P + A P++L Y+Y+LAS FH ++ R Sbjct: 481 ELPEEVAIAAEQYAPHRLIRYVYELASQFHSYYKAER 517 >gi|283850760|ref|ZP_06368047.1| arginyl-tRNA synthetase [Desulfovibrio sp. FW1012B] gi|283574003|gb|EFC21976.1| arginyl-tRNA synthetase [Desulfovibrio sp. FW1012B] Length = 552 Score = 353 bits (907), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 206/564 (36%), Positives = 320/564 (56%), Gaps = 45/564 (7%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE-LIVARIKIDPDVDSVFIAGKGFI 89 + IE PRD AHG L+TN A++ ++ + P +AE L A + D + V +AG GF+ Sbjct: 25 KTTIEPPRDKAHGDLATNVALVAAKDAKMPPRALAEHLRQALLAADTGLAEVSVAGPGFL 84 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N+ +P++ ++ + ++ G YG IG+GTK+ +EFVSANPTGP+H+GH R A VGD Sbjct: 85 NVTFAPAFWQQTVLDVLEQGDRYGLLDIGQGTKIQVEFVSANPTGPLHIGHGRGAAVGDC 144 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 LA ++ +G+ V EYYINDAG Q+ L LS+ +RY++ L ++ PE YY G Y+K + Sbjct: 145 LARVLRAAGFTVETEYYINDAGRQMRILGLSILYRYRELLGEPVTE-PEDYYRGDYVKDL 203 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 +L D+ LL EE + + + ++ IR DL+ + HD++ E Sbjct: 204 AGQLIDREGRGLLALSEEAATDACRLHGEKEILAGIRKDLQDFRVHHDVWFPESKLLAA- 262 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + D+L + Y D D F +T GDD DR L+KS G Sbjct: 263 -GAVERTFDDLRAKNLAY---------------DKD-GAFWFATTTFGDDKDRVLVKSGG 305 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCEL 388 TYFA+D+AY K+ RGFD ++ + G+DH GYV R++A AA+ + +A + V+L +L Sbjct: 306 ELTYFASDIAYHDDKFHRGFDVVVDIWGADHHGYVPRMKACVAALGRDPEASLKVILVQL 365 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V L + G I MS RAG F TL VV EVG+D+ RFM L RK+ LDFD V ++S + Sbjct: 366 VNLLKGGEQIAMSTRAGKFETLADVVAEVGADAARFMFLSRKSDSHLDFDLDAVTKKSMD 425 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE------FDTS-ELQLIVH 501 NPV+YVQYA+AR RS+F +A + R ++P + DT+ +L+L+ Sbjct: 426 NPVYYVQYAHARVRSVFAKAAE-----------RGLVPDAASPALLARLDTAEDLELLKL 474 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 L +YP + A + P+ ++FYL +LA H +++ + + A + +T R++ Sbjct: 475 LEQYPDTVAAAARSFAPHLVSFYLRELAGKLHRYYTVN------QVLGAGDEAVTAARMR 528 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 L+ AVA ++ +GL ++GV +P++M Sbjct: 529 LLQAVALVVKNGLGLLGVSAPDKM 552 >gi|256829388|ref|YP_003158116.1| arginyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028] gi|256578564|gb|ACU89700.1| arginyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028] Length = 551 Score = 353 bits (906), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 206/583 (35%), Positives = 319/583 (54%), Gaps = 40/583 (6%) Query: 10 RLKNYLKEIDCKIKVEK--KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE- 66 + KNY+ E + K + + IE P+ HG ++TN M++ + G +P T+AE Sbjct: 2 KAKNYISEKLTALMAAKGQALPAKTTIEAPKSEQHGDMATNITMVMPKEKGQNPRTVAEA 61 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 L + + P+++S+ IAG GFIN P + +++ + + + ++GR +G+G KV +E Sbjct: 62 LKTELLAMCPEIESIEIAGPGFINFTFKPVFWQEVALAALENKADFGRIDVGQGRKVQVE 121 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 +VSANPTGP+H+GH R A VGD+L ++ F+G+EV EYY+NDAG Q+ L L+V+ RYQ Sbjct: 122 YVSANPTGPLHIGHGRGAAVGDSLTRILRFTGHEVETEYYLNDAGRQMRLLGLAVWVRYQ 181 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 QA + PE Y G Y+K + L + LL+ PEE+ L + + + ++ I+ Sbjct: 182 QAC-GIEIPFPEDCYRGDYIKDISAALLAEKGKALLDLPEEEALDLCYERGMTDILNGIK 240 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 DL ++H + SE D + ++ L +G YE Sbjct: 241 QDLIDFRVEHQHWFSEKSLV--DGGQVEASLNRLLAEGRAYE----------------KD 282 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366 L FRST GDD DR L KSDG TYFA+D+AY K RGFD M+ + G+DH GYV R Sbjct: 283 GALWFRSTDHGDDKDRVLRKSDGLLTYFASDIAYHDNKIARGFDMMVDIWGADHHGYVPR 342 Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 ++A A+ + + + V+L +LV L + G I MS RAG F TL V EVG D+ RF+ Sbjct: 343 MKAAIEALGKDRESLQVILVQLVNLIQGGEQIAMSTRAGKFETLADVCAEVGVDAARFIF 402 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRN 483 L RK+ LDFD VK+QS +NPV+YVQYA+AR S+ R+A++ P+ L Sbjct: 403 LSRKSDSHLDFDLDVVKQQSMDNPVYYVQYAHARISSLMRKAEEQGVALPEPSGALMALL 462 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS-HGREN 542 P++ L L + +E A P+ +++YL +LA + H +++ H Sbjct: 463 TTPEDK-------ALFKALDAFEDTLELAARTLSPHHVSYYLMELAGLLHRYYTVH---- 511 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +++ L R+ L AVA ++ +GL+++GV +P M Sbjct: 512 ---HILSGDDQALLQARILLFQAVAGVLKAGLDLLGVNAPERM 551 >gi|317152002|ref|YP_004120050.1| arginyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2] gi|316942253|gb|ADU61304.1| arginyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2] Length = 547 Score = 353 bits (906), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 213/561 (37%), Positives = 320/561 (57%), Gaps = 42/561 (7%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 D+ VIE P+D G +S N AM+L++ G P IAE I A + DP + V IAG GF+ Sbjct: 24 DKGVIEPPKDRQFGDMSVNVAMMLAKQAGKPPRAIAEEIAAAMADDPRIARVDIAGPGFL 83 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N +P + + + + +G YG + +GKG +V +E+VSANPTGP+H+GH R A +GD+ Sbjct: 84 NFTFAPGFWHETIGVVREAGQGYGASDLGKGVRVQVEYVSANPTGPLHIGHGRGAALGDS 143 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 L +M +GYEV EYY+NDAG Q+ L S+++R + AL D PE YY G Y+ + Sbjct: 144 LVRIMEKAGYEVEAEYYVNDAGRQMRILGSSIWYRLK-ALSGRDVAEPEDYYRGDYIIGI 202 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 +++ + +L+ E+ + I +D + ++ IR+DL+A ++HD++ SE Sbjct: 203 ARDVL-AANPGILDMDEKDAVEICQDRGMNDILDGIREDLRAFGVRHDVWFSEK------ 255 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 +L G V E +S + D FRST GDD DR L KS G Sbjct: 256 ---------SLVADGLVDETFADLRESGLGFEQD---GAFWFRSTQFGDDKDRVLRKSSG 303 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 TYFA+D+AY K++RGFD ++ + G+DH GYV R+ A A+ KK ++V+L LV Sbjct: 304 DTTYFASDIAYHDHKFKRGFDLVVDIWGADHHGYVPRMMAACEALG-KKGGLHVILVNLV 362 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 L RDG P+ MS RAG+F TL+ VVDEVG+D+ RFM L RK+ LDFD VK+++ +N Sbjct: 363 NLLRDGEPVAMSTRAGEFETLKDVVDEVGADAARFMFLSRKSDSRLDFDLELVKQKTMDN 422 Query: 450 PVFYVQYAYARCRSIFRQAKD-----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 PVFYVQYA+AR S+ +A + PD + ++E+D L+L L + Sbjct: 423 PVFYVQYAHARICSLNAKAAEAGVAPAGPD------KAALALLDTEYDLDVLRL---LDQ 473 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 YP +E+A Q P+ ++ YL +LAS H ++++ V + + + RL L+ Sbjct: 474 YPDYVESAARTQSPHLISTYLQELASTLHRYYTNCH-------VLSADPAVASARLMLLG 526 Query: 565 AVASIINSGLNIIGVESPNEM 585 VA ++ GL ++GV +P M Sbjct: 527 CVAGVVRDGLGLLGVSAPESM 547 >gi|320530137|ref|ZP_08031207.1| arginyl-tRNA synthetase [Selenomonas artemidis F0399] gi|320137570|gb|EFW29482.1| arginyl-tRNA synthetase [Selenomonas artemidis F0399] Length = 553 Score = 353 bits (905), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 213/561 (37%), Positives = 299/561 (53%), Gaps = 47/561 (8%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 IV+E P + G ++TN AM +R P IAE+IV+ + D ++ IAG GFINL Sbjct: 33 IVLEEPPEKDMGDVATNFAMQSARVFRKSPKAIAEIIVSYLTGDW-LERTEIAGPGFINL 91 Query: 92 YLSPSYLRKILSSIVVSGIEYGR-NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL PS +L ++V+G YG+ +V +E+VSANPTGP+HVGH R A VG L Sbjct: 92 YLKPSVYADMLRGVLVAGEAYGQLPARADAPRVQVEYVSANPTGPLHVGHGRGAAVGSAL 151 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 L+ +GY V EYY+NDAG Q+N LA+SV RY + L PE Y G + Sbjct: 152 VKLLCAAGYAVDSEYYVNDAGNQMNLLAVSVNARYLE-LLGQAVTFPENGYHGADITETA 210 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 + + DK + L PEE+ L I +D + + + +++DL + D + SE H P Sbjct: 211 RRIIDKDGDKYLALPEEERLRIFQDVAYREKLAALKEDLADFGVTFDRWFSERTLH---P 267 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ--LLFRSTMVGDDVDRPLLKSD 328 +R +D L +G Y RK + RST GDD DR + + + Sbjct: 268 DAVRRAVDELLARGTAY------------------RKDGAVWLRSTDYGDDKDRVIFRDN 309 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 G TY AAD+AY KY RG+ +I + G+DH GYV R++A AA+ AQ+ VL ++ Sbjct: 310 GVPTYLAADIAYHDDKYRRGYGRLINIWGADHHGYVARVKAAMAALGHDPAQLTVLFLQM 369 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V LYRDG +K+SKR G+ +TLR +++EVG D+ R+ + R LDFD K++S E Sbjct: 370 VSLYRDGDLVKLSKRTGETVTLRELMEEVGVDAARYFFIMRSLDSQLDFDLDLAKKRSNE 429 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 NP +YVQYA+AR SIFRQA ++ L P + + +E+ LI LA YP Sbjct: 430 NPAYYVQYAHARISSIFRQAGEL------GLTPADGAELALLKEDTEIALIKKLAAYPEE 483 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVH 564 I A P ++A Y Y+LA FH ++ GRE P L RL LV Sbjct: 484 IARAAAEYAPQRIARYSYELAGAFHSFYNQCRIVGREKP-----------LASARLALVT 532 Query: 565 AVASIINSGLNIIGVESPNEM 585 A +I L I+GV +P +M Sbjct: 533 ATRHVIRHSLGILGVSAPEQM 553 >gi|88608193|ref|YP_505950.1| arginyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama] gi|109895008|sp|Q2GEZ6|SYR_NEOSM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|88600362|gb|ABD45830.1| arginyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama] Length = 570 Score = 353 bits (905), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 212/587 (36%), Positives = 327/587 (55%), Gaps = 25/587 (4%) Query: 6 DFSSRLKNYLKEIDCKI---KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 D RL N L E+ I + +++L + P+ +G ST + ++++ + L Sbjct: 2 DLFLRLGNVLTEVVTSIFGVTLSEQVL---LWNSPKKREYGDFSTAISFLIAKEVRLSLH 58 Query: 63 TIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +A I ++ D+ +V +A GFIN++L+ + L+++ YG + IG Sbjct: 59 EVACSIADGLRSFKDLFKNVSVASGGFINVFLTSDTWSEFLAAVSDDAGGYGFSDIGHAV 118 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 +N+EFVSANPTGP+H+GH R AV+ D A L+ G+ +TREYYINDAG QI+ L SV Sbjct: 119 PLNLEFVSANPTGPLHLGHIRGAVLFDIFAELLDKFGFSLTREYYINDAGKQIDLLVYSV 178 Query: 182 FWRYQQALYNNDSD-LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP-IVKDYSVQ 239 F R+ + L +SD P Y G Y++ + L + + + E K ++ + Sbjct: 179 FVRFCEQLRKKESDNFPSNCYAGDYIRDIASYLISTFPDSVKDTTELKSFSDTFREVILS 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M +I+ DL L I +D ++ E + H G+ I +I L +GY+ E LP PK K+ Sbjct: 239 LTMDMIKSDLAKLGISYDCYVREKELHEGNY--IEKVIAVLDEKGYLDEEELPSPKGKSG 296 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 ++R+Q +F ST GDD +R L K DGS+TYFA+D+AY K ERGF++MI +G+D Sbjct: 297 DW--VERRQKVFLSTKFGDDTNRALQKVDGSWTYFASDVAYHYHKLERGFNHMIVGLGAD 354 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-VG 418 H+GYVKRL V A+S A+I++ L LV L+R+G P+K+SKR GD ITL V++ + Sbjct: 355 HAGYVKRLSGVVEALSGGDARIDIKLYNLVNLFRNGKPVKLSKRNGDLITLDDVLESGIT 414 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 +RF ML + + +LDFD K S +NP+FYVQYA+ARC S+ R+ Sbjct: 415 VSEIRFAMLTKSSEIVLDFDLDKFVRASYDNPLFYVQYAHARCSSLLRKRG--------- 465 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 P + EL L+V LA+ P +++ ++ E +KL FYL+++A FH W+ Sbjct: 466 --PSAKCDAAMLVEKQELDLMVTLAKLPSLLKVIVVSGEVHKLTFYLHEVAERFHALWNA 523 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G + RF+ + +LT RL LV AV + + S L ++ +E M Sbjct: 524 GMIENKFRFIIEDEPELTNARLILVKAVKNTLASVLKVMKIEPAERM 570 >gi|304311986|ref|YP_003811584.1| Arginyl-tRNA synthetase [gamma proteobacterium HdN1] gi|301797719|emb|CBL45941.1| Arginyl-tRNA synthetase [gamma proteobacterium HdN1] Length = 586 Score = 353 bits (905), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 211/617 (34%), Positives = 322/617 (52%), Gaps = 77/617 (12%) Query: 9 SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68 S LK + + ++ ++ IER RD HG ++N AM+L++P GL P +A+ + Sbjct: 7 SLLKAAVAHLQAAHQLPSELSPTYQIERTRDKQHGDFASNLAMMLAKPAGLKPRDLAQQL 66 Query: 69 VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128 V + DP + IAG GFIN YL +I+ I+ G ++G + +G G + +EFV Sbjct: 67 VNALPADPAIQKTEIAGPGFINFYLQDGSQYQIVPQILSQGAKFGHSKVGAGQYIQVEFV 126 Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188 SANPTGP+HVGH R A G TLA+L+ G+ V REYY+NDAG Q+N LA SV+ RY + Sbjct: 127 SANPTGPLHVGHGRGAAYGATLANLLDAVGFRVHREYYVNDAGRQMNILATSVWLRYLE- 185 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK-------------- 234 L + P Y G Y+ + S +LN + WL V+ Sbjct: 186 LCGVSFNFPSNGYKGGYILEI--------SQAVLNQAGQTWLRSVEAVFQDIPADEPAGG 237 Query: 235 --------------------------DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 D ++ +++ IRDDL+ +++ + SE Sbjct: 238 DKEEHIDSLIERAKQLLGKDGYKVFFDAALDSILGDIRDDLREFGVEYTEWFSEMSLT-- 295 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 D ++ ID L G +YE + FRST GDD DR + + + Sbjct: 296 DSGSVQRAIDRLQTNGKLYE----------------KDGAIWFRSTEYGDDKDRVVARDN 339 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 G TYFA+D+AY K+ERGFD +I V G+DH GY+ R++A +A+ ++ VLL + Sbjct: 340 GQTTYFASDIAYHMNKFERGFDRVINVWGADHHGYIARVKAALSALGYDPEKLTVLLVQF 399 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 LYR G ++MS R+G F+TLR + +EVG+D+ RF + RK+ + +DFD K QSK+ Sbjct: 400 AILYRGGERVQMSTRSGSFVTLRELREEVGNDAARFFYVTRKSEQHMDFDLDLAKSQSKD 459 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 NP++Y+QYA+AR SI ++A D + ++ ++++ E L+ LA+YP + Sbjct: 460 NPIYYIQYAHARVCSILKKAAAESAPWDRESGLAHLHLLDNDY---EQGLLNQLAKYPEL 516 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 +E A + EP++LA YL DLA FH W + + V + L RL L A+ Sbjct: 517 LERAALQYEPHQLAQYLRDLAGEFHS-WYNAHK------VIIEDANLRNARLTLSEAIRQ 569 Query: 569 IINSGLNIIGVESPNEM 585 +IN+GL ++GV +P M Sbjct: 570 VINNGLTLLGVSAPESM 586 >gi|134301014|ref|YP_001114510.1| arginyl-tRNA synthetase [Desulfotomaculum reducens MI-1] gi|189083532|sp|A4J9D2|SYR_DESRM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|134053714|gb|ABO51685.1| arginyl-tRNA synthetase [Desulfotomaculum reducens MI-1] Length = 561 Score = 352 bits (904), Expect = 8e-95, Method: Compositional matrix adjust. Identities = 207/569 (36%), Positives = 320/569 (56%), Gaps = 37/569 (6%) Query: 21 KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVD 79 K +V K + ++IE PR+ HG +TN AM L++P + P IAE I+ + + + V+ Sbjct: 26 KGQVNKLEIPEVIIEVPREKGHGDFATNLAMQLAKPAKMAPRKIAEAIIENLDLANTQVE 85 Query: 80 SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139 V IAG GFIN YL PS++ ++ I+ YGR +G G +V +EFVSANPTG +H+G Sbjct: 86 RVEIAGPGFINFYLQPSWVHGVIPMIIQEDRNYGRLELGDGQRVQVEFVSANPTGLLHMG 145 Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199 + R A +GD+LAS++ F+GY V+REYYINDAG QI S+ RY Q L D LPE Sbjct: 146 NARGAALGDSLASILDFAGYRVSREYYINDAGNQIENFGKSLEVRYLQQL-GQDIQLPEE 204 Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259 Y G + K +K LL+ + + Y++Q + IR+ L + +D++ Sbjct: 205 GYHGEDIIDTVKGYINKNGRGLLDADQTTRRKTLAAYALQEKLTHIRNTLLDFGVVYDVW 264 Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319 SE H D I++ +D L ++G++YE L F++T GD+ Sbjct: 265 YSEQALH--DSGAIQETLDELRQKGFIYE----------------QENALWFKATAFGDE 306 Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 D +++S+G TYFAAD+AY K KY+RGFD +I + G+DH G+V R++ A+ + Sbjct: 307 KDEVVVRSNGIPTYFAADIAYHKDKYKRGFDRVIDIWGADHHGHVNRMKGSMEALGHNRD 366 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439 + ++L +LVRL R G ++MSKR G F+TL +V+EVG D+ R+ + R L+FD Sbjct: 367 NLQIILMQLVRLLRGGEVVRMSKRTGQFVTLEELVEEVGRDAARYFFVMRSPDSHLEFDL 426 Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLFPRNVIPQESEFDTSEL 496 K Q+ +NPVFY+QYA+AR SI RQ ++ P++ I + +EL Sbjct: 427 DLAKSQTNDNPVFYIQYAHARICSILRQLQEQGRPLPEI-------AAINPTVLKEEAEL 479 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ LA++P I A P+++A YL+DLA +FH ++ R V N ++ Sbjct: 480 ELLRKLADFPSEIAAAAEMMAPHRIARYLHDLAGLFHSFYNSHR-------VITENEAIS 532 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL LV V ++ + L ++G+ +P +M Sbjct: 533 EARLVLVQCVRIVLRNALGLLGLTAPEKM 561 >gi|299537939|ref|ZP_07051225.1| arginyl-tRNA synthetase [Lysinibacillus fusiformis ZC1] gi|298726521|gb|EFI67110.1| arginyl-tRNA synthetase [Lysinibacillus fusiformis ZC1] Length = 555 Score = 352 bits (904), Expect = 8e-95, Method: Compositional matrix adjust. Identities = 195/556 (35%), Positives = 316/556 (56%), Gaps = 35/556 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFIN 90 I +E P+D A+G +TN AM L++ P IAE I+ + D++ + IAG GF+N Sbjct: 33 IHLETPKDKANGDYATNIAMQLTKLAKKPPRAIAEAILENLDTTGTDIEKIDIAGPGFMN 92 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + + +L ++++ ++ G +YGR+ G G KV +EFVSANPTG +H+GH R A VGD+L Sbjct: 93 ITVRKDFLTEVVTQVLEQGTDYGRSNAGAGEKVQVEFVSANPTGDLHLGHARGASVGDSL 152 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +++ +GY V+REYYINDAG QIN LA S+ RY+QAL +++PE Y G + + Sbjct: 153 CNVLDMAGYSVSREYYINDAGNQINNLAYSLEARYKQAL-GMKAEMPEDGYHGQDIIDIA 211 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 +LA ++ +L +++ + + + + ++ DL + D++ SE + + Sbjct: 212 GKLAKEHGDAILAKSDDERFAFFRQHGLALELDKLKTDLANFRVNFDVWYSETSLY--EN 269 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I +D L G+V+E + FRST GDD DR L+K+DGS Sbjct: 270 GKIEVALDKLKANGHVFE----------------EDGATWFRSTTFGDDKDRVLIKNDGS 313 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 +TY D+AY + K RGFD +I + G+DH GY+ R++A A+ + + V + ++V+ Sbjct: 314 FTYLTPDIAYHEDKIVRGFDKLINIWGADHHGYIPRMKAAIQALGYDRDTLEVEVIQMVQ 373 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 LY++G KMSKR G+ +T+R +V+EVG D+VR+ + +DFD QS ENP Sbjct: 374 LYKNGEKFKMSKRTGNAVTMRELVEEVGLDAVRYFFVKTAGDSHMDFDLDLAVSQSNENP 433 Query: 451 VFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 V+Y QYA+AR SI R A + F L N++ E E D L+ + ++P+V+ Sbjct: 434 VYYAQYAHARISSILRSANEQGFAATTEHL---NLLTAEKEID-----LLKKIGDFPKVV 485 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 A + P+++A Y+ + A+ FH ++ + + A+N++LT RL L+ AV + Sbjct: 486 AEAAKHRTPHRIANYIQETAAAFHSFYN------AEKVLDASNKELTEARLALITAVRTT 539 Query: 570 INSGLNIIGVESPNEM 585 I + L +IGV +P +M Sbjct: 540 IANALRLIGVSAPEKM 555 >gi|323342451|ref|ZP_08082683.1| arginine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463563|gb|EFY08757.1| arginine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 546 Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 196/554 (35%), Positives = 329/554 (59%), Gaps = 36/554 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +++E P + G STN AM L++ +G +P IA +IV +++ + V+S+ +AG GFIN Sbjct: 29 VMLEIPNNPEMGDYSTNIAMRLTKRVGKNPREIAGVIVEKLEDNEMVESISVAGPGFINF 88 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + P+ L +++ ++ +G +YGR+ G+G ++ E+VSANPTG +HVGH R A GD+L+ Sbjct: 89 VMKPAVLGSVVNDVIEAGKDYGRSNAGEGIRLLNEYVSANPTGQLHVGHARGAAWGDSLS 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +M+F+GY+V REYYIND G QI L+ S++ RY+QA + ++ LPE Y G + + Sbjct: 149 RIMSFAGYDVLREYYINDLGNQILMLSHSLYARYKQA-FGMEAPLPEDGYHGPDIIEIAN 207 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 ++ + + L+ PEE+W+P K+ ++ ++ I++DL ++ D ++SE + D Sbjct: 208 DVKETEGDKWLSAPEEEWVPYFKELGIKLELERIKEDLNTFGVEMDSWVSEKWLY--DDG 265 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + + ++ L +G +E + L RST GDD DR L+KSDGSY Sbjct: 266 RVEESLEALKAKGVTFE----------------EDGALWLRSTDFGDDKDRVLIKSDGSY 309 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 TY D+A K ERG+ +++ + G DH GY+ R++A A+ ++V + ++VRL Sbjct: 310 TYLVPDIANHIYKLERGYTHLLNLWGGDHHGYIVRMQAALEALGHPNV-LDVDIIQMVRL 368 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 +G+ +KMSKR G+ + L +VD++G D+ R+ + R + LDFD +++S +NPV Sbjct: 369 VDEGVEVKMSKRTGNALGLVELVDDIGVDATRYFFVSRALATPLDFDLGLARKKSNDNPV 428 Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511 FYVQYA+AR SI RQA ++ P +D VI Q + + E+ L+ + E+ V+ + Sbjct: 429 FYVQYAHARICSILRQAGEV-PHVD-------VIDQLT--NPKEIALLKEINEFSSVVAD 478 Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571 A +E +K+A Y+ DLAS FH + ++ + +N +L RL L+ AV ++ Sbjct: 479 AAKKREVHKIANYVQDLASSFHSFYG------EVKVMDPSNPELQAQRLNLLVAVKITLS 532 Query: 572 SGLNIIGVESPNEM 585 + LN+IGV +P +M Sbjct: 533 NALNLIGVNAPEQM 546 >gi|330685904|gb|EGG97533.1| arginine--tRNA ligase [Staphylococcus epidermidis VCU121] Length = 553 Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 207/578 (35%), Positives = 318/578 (55%), Gaps = 43/578 (7%) Query: 15 LKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72 ++EI+ IK K D I IE P+D +G STN AM+L++ +P IA+ IV + Sbjct: 12 VEEIEASIKKAKLANDIPEIKIEIPKDVKNGDYSTNIAMVLTKIAKRNPREIAQAIVDHL 71 Query: 73 KID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131 V V IAG GFIN YL YL I+ + G ++G+ K + +E+VSAN Sbjct: 72 DASKAHVKKVDIAGPGFINFYLDNQYLTDIIPEAIQKGDQFGKAEESKNKNILLEYVSAN 131 Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 PTG +H+GH R A VGDTLA+++ +GY VTREYYINDAG QI+ LA S+ R+ +AL + Sbjct: 132 PTGDLHIGHARNAAVGDTLANILIAAGYHVTREYYINDAGNQISNLARSIETRFFEALGD 191 Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251 + ++PE Y G + +GK+LADK+ E+ ++ +++ L + V M ++ DL Sbjct: 192 DSHEMPEDGYNGKDIVEIGKDLADKHP-EIKDYSDDERLKTFRQLGVDYEMSKLKKDLSD 250 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 N D + SE + + I++++ + GY YE Sbjct: 251 FNTHFDNWFSETSLY--EKGEIKEVLAKMNELGYTYEA----------------DGATWL 292 Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371 R++ DD DR L+K DG+YTYF D+AY K +RG D +I +MG+DH GY+ RL+A Sbjct: 293 RTSDFKDDKDRVLIKKDGNYTYFLPDIAYHFDKVQRGNDILIDLMGADHHGYINRLKASL 352 Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431 ++ + + ++VRL ++G +KMSKR G+ ITLR ++DEVG D+ R+ + R Sbjct: 353 ETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSP 412 Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQ 487 DFD KEQS++NPV+Y QY +AR SI +QAK DI D+DF Sbjct: 413 DTHFDFDMELAKEQSQDNPVYYAQYGHARICSILKQAKEQGIDISTDVDFSKIT------ 466 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 + ++L+ +AE+ IE+A ++ P+++ Y+ DLAS FH ++ + Sbjct: 467 ----NEKAIELLKKVAEFEPTIESAADSRAPHRMTNYIQDLASHFHKFYNAEK------- 515 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V ++ + T + LV AV +N+ L ++GV +P M Sbjct: 516 VLTDDIEKTKAHIALVEAVRITLNNALALVGVSAPESM 553 >gi|115373269|ref|ZP_01460569.1| arginyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1] gi|310824517|ref|YP_003956875.1| arginyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1] gi|115369715|gb|EAU68650.1| arginyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1] gi|309397589|gb|ADO75048.1| Arginyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1] Length = 592 Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 199/571 (34%), Positives = 312/571 (54%), Gaps = 34/571 (5%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD--VDSVFIAGKGFIN 90 +E P++ AHG S N AM+L++ G P IA+ IV + +DP V V +AG GF+N Sbjct: 31 TVEAPKNPAHGDWSVNVAMMLTKAEGKPPRDIAQAIVKGL-VDPQGIVTKVDVAGPGFLN 89 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNL-IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 L +++ ++ +G +G G +V +EFVSANPTGP+H+GH R A +GD Sbjct: 90 FTLKEQVHQQVAREVLQAGETFGHQAPKSTGKRVLVEFVSANPTGPVHIGHARGAFMGDA 149 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 +A L+ +G++VTRE+YIND G Q+ TL +V RY+Q L+ +L EG YP Y+ + Sbjct: 150 VARLLEAAGHDVTREFYINDYGKQVETLGRTVHKRYRQ-LFGQQVELGEGEYPAEYVIDI 208 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 K+ + + L+ PE +WLP ++ +K IR L+ NI+HD+F SE H Sbjct: 209 AKDWKEAVGDKYLHLPESEWLPEAMAVGIRENLKAIRATLQQANIRHDVFFSEASLH--T 266 Query: 270 PSPIRDIIDNLARQGYVYEGI--------LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 + I+D R+G YE + SK Q D R R++ GDD D Sbjct: 267 SGKVLAIVDEYKRRGATYEAAEAERTGEKVRHEDSKAAQYTDRQRGGTFLRTSQHGDDED 326 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381 R +L+ DG+ Y ADLAY + KY RGFD +I V G+DH+G+ R+ A + ++ Sbjct: 327 RIILRHDGTPVYLTADLAYHQEKYNRGFDRIIDVFGADHAGHTPRISAGMTLLGLDAKKL 386 Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441 LL +LVR+ R G +K+SKR G L ++ E G+D RF+ L + + DFD Sbjct: 387 EFLLVQLVRITRGGEEVKVSKRKGTVFELEDLIHEAGADVCRFLFLVKTANSRFDFDLDL 446 Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLFP----RNVIPQESEFDTS 494 VK+QSK+NPVFY QY +ARC SI ++A + F L+ L P R +P+ Sbjct: 447 VKKQSKDNPVFYFQYGHARCASILKKAAEKGTPFVGLE-GLTPAHLARLTLPE------- 498 Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554 EL ++ +++ P V+ +A EP+ + ++ +L + FH +++ + +P + + + + Sbjct: 499 ELSMLKKMSQLPDVVASAAERLEPHHVLYFCQELITDFHSYYTKYKTDP----IISGDSE 554 Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 T RL LV A+ + S ++G+++P M Sbjct: 555 KTQGRLGLVAALKQTLRSAFALLGIQAPEYM 585 >gi|239636782|ref|ZP_04677784.1| arginyl-tRNA synthetase [Staphylococcus warneri L37603] gi|239598137|gb|EEQ80632.1| arginyl-tRNA synthetase [Staphylococcus warneri L37603] Length = 553 Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 207/578 (35%), Positives = 318/578 (55%), Gaps = 43/578 (7%) Query: 15 LKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72 ++EI+ IK + D I IE P+D +G STN AM+L++ +P IA+ IV + Sbjct: 12 VEEIEASIKKAELANDIPEIKIEIPKDVKNGDYSTNIAMVLTKIAKRNPREIAQAIVDHL 71 Query: 73 KID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131 V V IAG GFIN YL YL I+ + G ++G+ K + +E+VSAN Sbjct: 72 DASKAHVKKVDIAGPGFINFYLDNQYLTDIIPEAIQKGDQFGKAEASKNKNILLEYVSAN 131 Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 PTG +H+GH R A VGDTLA+++ +GY VTREYYINDAG QI+ LA S+ R+ +AL + Sbjct: 132 PTGDLHIGHARNAAVGDTLANILIAAGYHVTREYYINDAGNQISNLARSIETRFFEALGD 191 Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251 N ++PE Y G + +GK+LADK+ E+ ++ +++ L + V M ++ DL Sbjct: 192 NSYEMPEDGYNGKDIVEIGKDLADKHP-EIKDYSDDERLKTFRQLGVDYEMSKLKKDLSD 250 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 N D + SE + + I++++ + GY YE Sbjct: 251 FNTHFDNWFSETSLY--EKGEIKEVLAKMNDLGYTYEA----------------DGATWL 292 Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371 R++ DD DR L+K DG+YTYF D+AY K +RG D +I +MG+DH GY+ RL+A Sbjct: 293 RTSDFKDDKDRVLIKKDGNYTYFLPDIAYHFDKVQRGNDILIDLMGADHHGYINRLKASL 352 Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431 ++ + + ++VRL ++G +KMSKR G+ ITLR ++DEVG D+ R+ + R Sbjct: 353 ETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSP 412 Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQ 487 DFD KEQS++NPV+Y QY +AR SI +QAK DI D+DF Sbjct: 413 DTHFDFDMELAKEQSQDNPVYYAQYGHARICSILKQAKEQGIDISTDVDFSKIT------ 466 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 + ++L+ +AE+ IE+A ++ P+++ Y+ DLAS FH ++ + Sbjct: 467 ----NEKAIELLKKVAEFEPTIESAADSRAPHRMTNYIQDLASHFHKFYNAEK------- 515 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V ++ + T + LV AV +N+ L ++GV +P M Sbjct: 516 VLTDDIEKTKAHIALVEAVRITLNNALALVGVSAPETM 553 >gi|217967868|ref|YP_002353374.1| arginyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724] gi|217336967|gb|ACK42760.1| arginyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724] Length = 550 Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 208/555 (37%), Positives = 315/555 (56%), Gaps = 34/555 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I++E P+ +G +T A+ +++ P +AE I IK P V + IAG GFIN Sbjct: 29 IIVETPKQKEYGDYATAVALQIAQKNKKPPRVVAEKISEYIKKSPFVKKIEIAGPGFINF 88 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +L+ L + L ++ I+ + K K+ IEF S NPTGPMH+ H R +GD+LA Sbjct: 89 FLNDEALWETLR-LIRKDIDDFVKIPSKKKKIQIEFGSINPTGPMHIAHARGVTIGDSLA 147 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +L G+ +E+YINDAG QI+ L S++ RY Q L D +PE Y G YL + K Sbjct: 148 NLFKRIGWNTEKEFYINDAGNQIDLLGESLYARYMQLL-GYDYQVPEEGYHGYYLIELAK 206 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 EL ++ S++ + E + K+Y++ M++ I+ L +++D++ SE H + Sbjct: 207 ELLNQ-KSQIESMDETEKKKFFKEYALSKMLEDIKTTLLNFGVEYDVWFSERTLH--ENG 263 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 ++++++ L + GY YE L F ST GD+ DR L+KSDG Sbjct: 264 KVKEVLEILRQNGYTYE----------------KDGALWFSSTKFGDEKDRVLIKSDGKA 307 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 TYF AD+AY K +RGFD +I V G+DH G+V RL+ A+ K + ++L ++VRL Sbjct: 308 TYFLADIAYHLNKIQRGFDWIIDVWGADHHGHVTRLKGAIQALGYPKDILEIILVQMVRL 367 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 R IKMSKR GDFITL+ + +EVG D++RF L R LDFD K+QS ENPV Sbjct: 368 MRGNEEIKMSKRTGDFITLKEIQEEVGKDAIRFFFLLRSPESQLDFDINLAKKQSVENPV 427 Query: 452 FYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 +YVQYA+ARC SI + A+ +L D D +++ +E E D LI++L YP +E Sbjct: 428 YYVQYAHARCCSILKNAETKGYNLADLDKADLSLLKEEKEKD-----LILNLLRYPERLE 482 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 + T E ++L FYL +L+++FHG++ + V + +++LT+ RL LV V II Sbjct: 483 DITRTLEIHQLPFYLLNLSTLFHGYYDSYK-------VISEDKELTLARLVLVDCVRIII 535 Query: 571 NSGLNIIGVESPNEM 585 L+I+GV +P +M Sbjct: 536 KDALSILGVSAPEKM 550 >gi|299821825|ref|ZP_07053713.1| arginine--tRNA ligase [Listeria grayi DSM 20601] gi|299817490|gb|EFI84726.1| arginine--tRNA ligase [Listeria grayi DSM 20601] Length = 556 Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 208/566 (36%), Positives = 315/566 (55%), Gaps = 41/566 (7%) Query: 25 EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFI 83 E +I D I++E P++ HG STN AM L+R P IAE I+ I D + + + Sbjct: 27 ESEIPD-ILLEVPKEKQHGDYSTNIAMQLARVAKKAPKQIAEAIIKEIDTEDSLIRKIDV 85 Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143 AG GFIN ++ +YL +++ I+ +G YG + GKG K+ +EFVSANPTG +H+GH R Sbjct: 86 AGPGFINFFVDNAYLTELVPVILEAGDSYGESDFGKGQKIQLEFVSANPTGDLHLGHARG 145 Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203 A +GD+LA++++ +G++V+REYYINDAG QIN L LS RY +A D PE Y G Sbjct: 146 AAIGDSLANILSTAGFDVSREYYINDAGNQINNLVLSAEARYFEAC-GIDKPFPEDGYHG 204 Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 V +K +G +L +KY + + E++ + + ++ +R DL+A + D + SE Sbjct: 205 VDIKELGNKLFEKYGDKYIEAEEQERRDVFRTEALAFETAKLRTDLEAFRVGFDNWFSES 264 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323 + + I ++ L + GYVYE D L R+T GDD DR Sbjct: 265 SLYA--ENKILPTLEVLRKNGYVYE---------------QDGATWL-RTTDFGDDKDRV 306 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383 L+K+DGSYTYF D+AY K ERGFD +I + G+DH GY+ R+ A+ Q+ V Sbjct: 307 LIKTDGSYTYFLPDIAYHLNKLERGFDILIDIWGADHHGYIPRMRGAIEALGYAPTQLEV 366 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443 + +LV LY +G +KMSKR G +T+R +V+EVG D+VR+ R + ++FD K Sbjct: 367 EIIQLVHLYENGEQVKMSKRTGKSVTMRDLVEEVGLDAVRYFFAMRSSDTHMNFDLGLAK 426 Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLI 499 S ENPV+YVQYA+AR SI R ++ + LD L + E+E D L+ Sbjct: 427 ATSNENPVYYVQYAHARISSILRSGEEQGIVVSDGLDVSL-----LQTETEID-----LL 476 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 L E+ V+ A + P+++ YL DLAS FH ++ + + + ++ R Sbjct: 477 KVLGEFSDVVAEAAAKRAPHRIVRYLNDLASAFHRFYNTN------KVLNPDEADISKAR 530 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L+ A + +GL ++GV +P +M Sbjct: 531 LALIKAAQVTLRNGLKLLGVSAPEKM 556 >gi|254491079|ref|ZP_05104260.1| arginyl-tRNA synthetase [Methylophaga thiooxidans DMS010] gi|224463592|gb|EEF79860.1| arginyl-tRNA synthetase [Methylophaga thiooxydans DMS010] Length = 585 Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 207/589 (35%), Positives = 314/589 (53%), Gaps = 61/589 (10%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 L I IER +D HG + N AM+L++P ++P IA IV + V V IAG GF Sbjct: 26 LPEIQIERTKDKTHGDFACNIAMMLAKPAKMNPRQIATDIVEALPTSDVVTQVEIAGPGF 85 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 IN +LS ++++ I+ +YG++ IGKG KV +EFVSANPTGP+HVGH R A G Sbjct: 86 INFFLSAEASQQVVKEILSKAEKYGQSQIGKGKKVQVEFVSANPTGPLHVGHGRGAAYGS 145 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 ++SL+ +G+ V REYY+NDAG Q++ L SV+ RY QA + P Y G Y+ Sbjct: 146 VVSSLLNAAGFNVHREYYVNDAGRQMDILGTSVWLRYLQACGETIT-FPSNGYQGSYVLD 204 Query: 209 VGKELADKYSSEL------------LNFPE--------------------EKWLPIVKDY 236 + EL ++ + + P+ E IV D Sbjct: 205 IAAELKQTFAEQFRHPADAVFDGVPADEPQGGDKELHIDGLTNQAKQLLGEANYRIVFDK 264 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 + A++ IRDDL ++D + SE + + I+ L + G +YE Sbjct: 265 GLNAILGDIRDDLAEFGTEYDEWFSERSL--VESGEVEKAIEQLKQAGQLYE-------- 314 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 ++ F+ST GD+ DR +++ +G TYFA+D+AY KY+RGFD +I + Sbjct: 315 --------EKGAWWFKSTDYGDEKDRVVIRDNGQATYFASDIAYHLNKYQRGFDEIIDIW 366 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G+DH GY+ R++A A+ + Q+ VLL + LYR + MS R+G+F+TLR + DE Sbjct: 367 GADHHGYIPRVKASMQAMQQNVDQLKVLLVQFAVLYRGAEKVGMSTRSGEFVTLRQLRDE 426 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG D+ RF + R + +DFD K QS +NPV+YVQYA+AR S+FRQ + D Sbjct: 427 VGKDAARFFYVMRGADQHMDFDLELAKSQSNDNPVYYVQYAHARVCSVFRQLTERGHAWD 486 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 +++ + +T E L+ LA+YP ++E A + P+ LA YL DLA FH ++ Sbjct: 487 KATGEQHL---DRLTETHEDALMTMLAKYPEILETAALNHTPHLLAHYLTDLARDFHTYY 543 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +F+ +N +L+ RL L+ AV +I + L ++GV +P M Sbjct: 544 N------AHQFIVDDN-ELSQARLTLIEAVRQVIQNALTVMGVSAPESM 585 >gi|223983739|ref|ZP_03633910.1| hypothetical protein HOLDEFILI_01191 [Holdemania filiformis DSM 12042] gi|223964285|gb|EEF68626.1| hypothetical protein HOLDEFILI_01191 [Holdemania filiformis DSM 12042] Length = 548 Score = 350 bits (899), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 200/573 (34%), Positives = 312/573 (54%), Gaps = 42/573 (7%) Query: 20 CKIKVEKKILD------RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK 73 C I K+ D +VIE P++ HG STNAAM L++ L +P IA+ ++ + Sbjct: 11 CIINAVKQAFDLDWESGDVVIEIPKEKIHGDYSTNAAMRLTKQLRQNPRMIAQQLIDHLD 70 Query: 74 I-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP 132 + V IAG GFIN ++ + L ++ ++ YGR+ G+G KV++E+VSANP Sbjct: 71 LKQGSVAKCEIAGPGFINFFMESASLASVIGVVLQENENYGRSDAGQGLKVDVEYVSANP 130 Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192 TG +H GH R A +GD++ LM F+GY+VTREYY+NDAG QI +ALS+ RY QA Sbjct: 131 TGDLHPGHARGAAMGDSVTRLMKFAGYDVTREYYVNDAGNQIRNMALSLQARYLQAC-GV 189 Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252 ++++PE Y G L + ++L +Y +L + + + + +QA + ++ DL A Sbjct: 190 EAEVPEDGYHGPDLIKIAQDLKQEYGEDLAHKDKAETYSFFRQQGLQAELAKLKADLAAF 249 Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312 ++ D++ SE + D + ++ L QG YE L R Sbjct: 250 GVEFDVWTSEQSIY--DRGMVDKALNTLKAQGMTYES----------------EGALWLR 291 Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372 +T GDD DR L+KSDGSYTY D+AY K++RG+D +I G+DH GY+ RL+A Sbjct: 292 TTDFGDDKDRVLVKSDGSYTYLTPDIAYHVDKFDRGYDKLIDFFGADHHGYIARLKAAVQ 351 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 ++ + K + V + ++ R+ +DG KMSKR G + L+ +V+E G D+VR+ + R Sbjct: 352 SLGKNKDDLEVDIIQMARMVKDGEEFKMSKRTGKAVALKDLVEEAGVDAVRYFFVSRAAD 411 Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492 +DFD K+Q+ ENPV+Y QYA+AR SI R DI P D +I E E D Sbjct: 412 THMDFDIDMAKKQTNENPVYYAQYAHARMCSILRSGADI-PLADH----YELITHEKELD 466 Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552 L+ H+ E+ + +A ++P+K+ Y+ LA +FH ++ + + N Sbjct: 467 -----LLKHINEFASTVADAAKTRQPHKMCNYITRLAQLFHTFYAD------CKVLDRTN 515 Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +L+ RL LV A + + L +IGV +P +M Sbjct: 516 LELSAQRLALVKASEMTLRNALTLIGVSAPEKM 548 >gi|289551531|ref|YP_003472435.1| Arginyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] gi|289181062|gb|ADC88307.1| Arginyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] Length = 555 Score = 350 bits (899), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 210/580 (36%), Positives = 313/580 (53%), Gaps = 45/580 (7%) Query: 15 LKEIDCKIKVEKKILDR----IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 + EI IK K I D+ I IE P+D +G STN AM+L++ +P IA+ IV Sbjct: 12 INEIKTSIKSAKLIQDQSIPEIKIEIPKDSKNGDYSTNIAMVLTKLAKRNPREIAQAIVD 71 Query: 71 RI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129 V V IAG GFIN YL YL I+ + G YG K ++ +E+VS Sbjct: 72 HFDTTKAHVKQVDIAGPGFINFYLDNHYLTAIIPEAISKGAHYGYASEPKNKRILLEYVS 131 Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189 ANPTG +H+GH R A VGD+LA+++ +GY+VTREYYINDAG QI LA S+ R+ +AL Sbjct: 132 ANPTGDLHIGHARNAAVGDSLANILIAAGYDVTREYYINDAGNQITNLARSIETRFFEAL 191 Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249 + +PE Y G + +GK+LA K+ E+ ++ + L + V+ M ++ DL Sbjct: 192 GDTSHKMPEDGYNGKDIIEIGKDLAQKHP-EIKDYSDHDRLKTFRQLGVEYEMVKLKRDL 250 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 N D + SE + D I + + + GY YE K T Sbjct: 251 ADFNAHFDSWFSETTLY--DNGAIENTLARMKENGYTYE------KDGAT---------- 292 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369 R++ DD DR L+KSDGSYTYF D AY K RG D +I +MG+DH GY+ R++A Sbjct: 293 WLRTSDFKDDKDRVLIKSDGSYTYFTPDTAYHYDKINRGNDILIDLMGADHHGYINRIKA 352 Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429 ++ + + ++VRL ++G +KMSKR G+ ITLR ++DEVG D+ R+ + R Sbjct: 353 SLETFGVNSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGVDAARYFLTMR 412 Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVI 485 DFD KEQS++NP++Y QYA+AR SI +QA+ DI D DF L + Sbjct: 413 SPDSHFDFDMELAKEQSQDNPIYYAQYAHARICSILKQARAQGIDITTDADFSLITND-- 470 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 + L+ +AE+ +VI+NA + P++L Y+ DLA+ FH ++ + Sbjct: 471 --------KAIDLLKKVAEFEQVIDNAAEHRAPHRLTNYIQDLAAAFHKFYNAEK----- 517 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V ++++ T + L+ AV +++ L ++GV +P M Sbjct: 518 --VLTDHQEKTKALVALIEAVRITLHNALTLVGVSAPESM 555 >gi|270159345|ref|ZP_06188001.1| arginyl-tRNA synthetase [Legionella longbeachae D-4968] gi|289165835|ref|YP_003455973.1| arginine tRNA synthetase [Legionella longbeachae NSW150] gi|269987684|gb|EEZ93939.1| arginyl-tRNA synthetase [Legionella longbeachae D-4968] gi|288859008|emb|CBJ12936.1| arginine tRNA synthetase [Legionella longbeachae NSW150] Length = 586 Score = 350 bits (898), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 207/591 (35%), Positives = 323/591 (54%), Gaps = 71/591 (12%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I I+R +D AHG ++N A++L++P P IAEL+V I DP V+ + IAG GFIN Sbjct: 30 IKIDRAKDSAHGDYASNLALVLAKPCRQSPRKIAELLVKAIPADPVVEKIEIAGAGFINF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 ++ + KI++ + G +G + IGK KV +EFVSANPTGP+HVGH R A G TL Sbjct: 90 FIHSNSRSKIIAEALEKGNRFGCSTIGKNQKVLVEFVSANPTGPLHVGHGRGAAFGATLG 149 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ +GY+VT EYY+NDAG Q+N LA SV+ RY + L +P Y G Y+ + + Sbjct: 150 NVLKAAGYDVTVEYYVNDAGRQMNILAASVWLRYLE-LSGEPVAIPANAYKGDYVSEIAQ 208 Query: 212 ELADKYSSE-----------------------------------LLNFPEEKWLPIVKDY 236 EL K++ E LL+ P + + Sbjct: 209 ELWLKHNREYVHPWATVIEGLPLDEPHGGDKEIYIDALVARMKILLSMPV---FSLFHQH 265 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 ++ +++ I+DDL +++D + SE + I+ I L G+ +E Sbjct: 266 ALNTVLEDIQDDLAEFGVKYDNWFSEQSLF--EDGSIQKGIQALKDSGHTFE-------- 315 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 L FR+T GD+ DR L++++G TYFA+D+AY KY+RG+D +I + Sbjct: 316 --------KEGALWFRATDFGDEKDRVLVRANGHTTYFASDVAYHWNKYDRGYDRIIDIF 367 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G+DH GY+ RL AV A+ ++ ++VLL + LYR ++MS R+G F+TLR + E Sbjct: 368 GADHHGYITRLRAVVKALGHDESTLDVLLVQFAILYRGVERVQMSTRSGSFVTLRELRQE 427 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD--IFPD 474 VG+D+ RF + RK+ + +DFD K +S +NPV+Y+QYA+AR S+ RQ K+ +F D Sbjct: 428 VGNDAARFFYVARKSEQHMDFDLDLAKSESNDNPVYYIQYAHARICSVLRQLKERGLFWD 487 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 L +++ QE E LI ++ YP V+E A + EP+++A+YL ++A+ H Sbjct: 488 QAMGLKHLDLLEQE-----HETHLISLISRYPEVVELAAVHCEPHQVAYYLREVANGLHS 542 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++ P L +L RL L+ AV +I +GL ++GV +P M Sbjct: 543 YYN---AVPLL----CEQEQLRCARLCLLEAVRQVIYNGLGLLGVSAPESM 586 >gi|158523225|ref|YP_001531095.1| arginyl-tRNA synthetase [Desulfococcus oleovorans Hxd3] gi|226701375|sp|A9A099|SYR_DESOH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|158512051|gb|ABW69018.1| arginyl-tRNA synthetase [Desulfococcus oleovorans Hxd3] Length = 556 Score = 349 bits (896), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 201/560 (35%), Positives = 305/560 (54%), Gaps = 39/560 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD-SVFIAGKGFIN 90 I +E PR HG +TN AM+ + + P IAE IVA + + IAG GFIN Sbjct: 30 IELEAPRFRDHGDFATNLAMVSASTQKMAPRKIAEAIVAHLADSAGILLKTEIAGPGFIN 89 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 ++ P +L I +G +G G +V +EFVSANPTGP+HVGH R A VGD++ Sbjct: 90 FFICPEAWLPVLHRIHEDQERFGACDLGGGKRVQVEFVSANPTGPLHVGHGRGAAVGDSV 149 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A ++AF G++V REYY+NDAG QI TL SV R+++ L D PE Y G Y++ + Sbjct: 150 ARILAFCGWQVHREYYVNDAGNQILTLGRSVLLRWRE-LSGQAVDFPEDCYQGDYIRSIA 208 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 +++ ++ L + + + ++ IR DL +I D + SE + Sbjct: 209 RQIDAEHRQALEKMESAEAVAFCARVAADQILDGIRRDLADFSITFDQWFSEKSLV--ET 266 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + + L G VYE L F ++ GD+ DR +++++G Sbjct: 267 GAVETTLARLKETGVVYE----------------SEGALWFATSRFGDEKDRVVVRNNGE 310 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFA+D+AY K K++RGF+ +I V G+DH GY+ R++A AV + ++V+L +LV Sbjct: 311 ATYFASDIAYHKNKFDRGFNRVIDVWGADHHGYIPRVKAAIGAVGRSQDDLDVILVQLVA 370 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L R+G P+ MS R+G+F+TL+ V +EVG+D+ RF+ L R LDFD K++S +NP Sbjct: 371 LLREGQPVSMSTRSGEFVTLKEVTNEVGADAARFIFLSRHYDSPLDFDLELAKKKSNDNP 430 Query: 451 VFYVQYAYARCRSIFRQAKD-----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 V+YVQY +AR S+ ++A + +D R P+ E+ L+ LA Y Sbjct: 431 VYYVQYVHARIASMLKKAAEEKGIGRVTAVDDKTLRRLAEPE-------EIDLVKLLARY 483 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 P + +A EP+++ FYL DLA+ FHG++S + V + LTM RL LV A Sbjct: 484 PEAVSHAARFLEPHRITFYLLDLAAGFHGYYSRHK-------VLTEDDGLTMARLYLVCA 536 Query: 566 VASIINSGLNIIGVESPNEM 585 V +I +GL ++GV +P M Sbjct: 537 VKQVIKNGLALLGVSAPESM 556 >gi|46579659|ref|YP_010467.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough] gi|81566897|sp|Q72CN5|SYR_DESVH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|46449074|gb|AAS95726.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough] gi|311233457|gb|ADP86311.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris RCH1] Length = 551 Score = 349 bits (896), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 195/557 (35%), Positives = 309/557 (55%), Gaps = 30/557 (5%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDSVFIAGKGF 88 ++ I+ P+ G L+ N A++L++ G +P +A I ++ D D+ ++ IAG GF Sbjct: 24 EKATIDTPKATGFGDLAANIALVLAKQAGQNPRELATRIADALRNRDADITAIDIAGPGF 83 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 +N+ S + R+ + +G +G + G G KV +E+VSANPTGP+H+GH R A VGD Sbjct: 84 LNVTYSQDFWRETILRAQEAGSAFGSSDTGAGRKVQVEYVSANPTGPLHIGHGRGAAVGD 143 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 +LA +M F+GY+V+ EYYINDAG Q+ L LSV W + L LPE +Y G Y+K Sbjct: 144 SLARIMRFAGYDVSTEYYINDAGRQMRLLGLSV-WVRAKELAGRPVTLPEDFYRGDYIKD 202 Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 + +EL +K LL+ + Y++ +++ I+ DL ++H ++ SE G Sbjct: 203 IARELMEKEPG-LLDLDDAAGEDRCFAYAMSSILDGIKQDLADFRVEHQVWFSERSLVEG 261 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 + + L G +E L FR+T GDD DR L KSD Sbjct: 262 --GAVEKTFNRLKEAGLAFE----------------QDGALWFRTTDFGDDKDRVLRKSD 303 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 G+ TYF++D+AY KY+RGFD ++ + G+DH GY+ R+ A AA+ K +V+L +L Sbjct: 304 GTLTYFSSDIAYHDNKYDRGFDLVVDIWGADHHGYIPRMRAAVAALGRKPEAFDVVLIQL 363 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V L R G + MS RAG F TL VV E G+D+ RFM L RK+ LDFD VK+++ + Sbjct: 364 VNLLRGGELVAMSTRAGQFETLADVVKETGADAARFMFLSRKSDSPLDFDLELVKQRTMD 423 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 NPV+YVQYA+AR S+ R+A + ++ L ++ P + E++L+ L + Sbjct: 424 NPVYYVQYAHARVCSVLRKAAERGIEMPAQLDGASLAPLSGD---DEMELLRLLDRFEET 480 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 + A A P+ ++ YL ++A H +++ R + A + + + RL L+ AV Sbjct: 481 VAGAATALAPHHISHYLMEVAGALHSYYA------RQPILNATEQDVIVPRLALLRAVGC 534 Query: 569 IINSGLNIIGVESPNEM 585 ++ +GL+++GV +P M Sbjct: 535 VLANGLSLLGVSAPESM 551 >gi|120602858|ref|YP_967258.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris DP4] gi|166232782|sp|A1VEG5|SYR_DESVV RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|120563087|gb|ABM28831.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris DP4] Length = 551 Score = 349 bits (896), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 195/557 (35%), Positives = 309/557 (55%), Gaps = 30/557 (5%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDSVFIAGKGF 88 ++ I+ P+ G L+ N A++L++ G +P +A I ++ D D+ ++ IAG GF Sbjct: 24 EKATIDTPKATGFGDLAANIALVLAKQAGQNPRELATRIADALRNRDADITAIDIAGPGF 83 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 +N+ S + R+ + +G +G + G G KV +E+VSANPTGP+H+GH R A VGD Sbjct: 84 LNVTYSQDFWRETILRAQEAGSAFGSSDTGAGRKVQVEYVSANPTGPLHIGHGRGAAVGD 143 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 +LA +M F+GY+V+ EYYINDAG Q+ L LSV W + L LPE +Y G Y+K Sbjct: 144 SLARIMRFAGYDVSTEYYINDAGRQMRLLGLSV-WVRAKELAGRPVTLPEDFYRGDYIKD 202 Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 + +EL +K LL+ + Y++ +++ I+ DL ++H ++ SE G Sbjct: 203 IARELMEKEPG-LLDLDDAAGEDRCFAYAMNSILDGIKQDLADFRVEHQVWFSERSLVEG 261 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 + + L G +E L FR+T GDD DR L KSD Sbjct: 262 --GAVEKTFNRLKEAGLAFE----------------QDGALWFRTTDFGDDKDRVLRKSD 303 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 G+ TYF++D+AY KY+RGFD ++ + G+DH GY+ R+ A AA+ K +V+L +L Sbjct: 304 GTLTYFSSDIAYHDNKYDRGFDLVVDIWGADHHGYIPRMRAAVAALGRKPEAFDVVLIQL 363 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V L R G + MS RAG F TL VV E G+D+ RFM L RK+ LDFD VK+++ + Sbjct: 364 VNLLRGGELVAMSTRAGQFETLADVVKETGADAARFMFLSRKSDSPLDFDLELVKQRTMD 423 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 NPV+YVQYA+AR S+ R+A + ++ L ++ P + E++L+ L + Sbjct: 424 NPVYYVQYAHARVCSVLRKAAERGIEMPAQLDGASLAPLSGD---DEMELLRLLDRFEET 480 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 + A A P+ ++ YL ++A H +++ R + A + + + RL L+ AV Sbjct: 481 VAGAATALAPHHISHYLMEVAGALHSYYA------RQPILNATEQDVIVPRLALLRAVGC 534 Query: 569 IINSGLNIIGVESPNEM 585 ++ +GL+++GV +P M Sbjct: 535 VLANGLSLLGVSAPESM 551 >gi|293374939|ref|ZP_06621235.1| arginine--tRNA ligase [Turicibacter sanguinis PC909] gi|292646416|gb|EFF64430.1| arginine--tRNA ligase [Turicibacter sanguinis PC909] Length = 553 Score = 349 bits (896), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 195/556 (35%), Positives = 322/556 (57%), Gaps = 35/556 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90 +++E +D +HG STN AM L++ +P IAE I+ + +V+ + IAG GFIN Sbjct: 31 VILENSKDVSHGDYSTNIAMQLTKIAKKNPRMIAEEILNNFNAESANVEKIEIAGPGFIN 90 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 ++ S + + +I+ G E+G + G G K N+E+VSANPTG +H+GH R A +GD+L Sbjct: 91 FFMKKSAFTQSIKNIIELGHEFGTSKSGNGLKYNVEYVSANPTGDLHLGHARGAALGDSL 150 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ +GY+VTREYY+NDAG QI+ L +S + RY QAL ++++PE Y G + +G Sbjct: 151 CRILTKAGYDVTREYYVNDAGNQIHNLVISAYARYLQAL-GLEAEMPEDGYHGPDIIALG 209 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 + + ++Y +L+N +E + ++++ S++ + IR DL ++ D++ SE + + D Sbjct: 210 QSMVEQYGDKLVNKLDENY-KLIREMSLEYELNKIRKDLDMFGVEFDMYTSEQELY--DN 266 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + +++ I L +G++YE + + FRST GDD DR L KSDGS Sbjct: 267 NLVQESIKLLEEKGFIYE----------------EDGAVWFRSTDFGDDKDRVLKKSDGS 310 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTY D+A K +RG D ++ + G+DH GY+ R++A A+ + ++ V + ++VR Sbjct: 311 YTYLTPDIANHIEKLKRGNDKLVDIWGADHHGYIARVKASMQALGYEADKLEVDIIQMVR 370 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L +DG KMSKR G +T+R +VDEVG D+VR+ + R +DFD ++S ENP Sbjct: 371 LIKDGEEFKMSKRTGKAVTIRELVDEVGVDAVRYFFVMRSGETQMDFDLDLATKKSNENP 430 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR-NVIPQESEFDTSELQLIVHLAEYPRVI 509 V+Y QYA+AR SI RQA++ + +L + N I E EF+ +L + ++P V+ Sbjct: 431 VYYAQYAHARTCSILRQAEE--KGFNVELKDQYNHITHEKEFEVIKL-----MGDFPIVV 483 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 +A + P+ + Y+ DLA+ FH ++ + + N + T +L L+ A+ Sbjct: 484 GDAANKRRPHLICNYINDLATAFHSLYNAE------KVINEENVEKTNEKLALIKALEIT 537 Query: 570 INSGLNIIGVESPNEM 585 I + L +IGV +P M Sbjct: 538 IKNALELIGVSAPERM 553 >gi|225017221|ref|ZP_03706413.1| hypothetical protein CLOSTMETH_01147 [Clostridium methylpentosum DSM 5476] gi|224949996|gb|EEG31205.1| hypothetical protein CLOSTMETH_01147 [Clostridium methylpentosum DSM 5476] Length = 562 Score = 349 bits (896), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 204/564 (36%), Positives = 322/564 (57%), Gaps = 42/564 (7%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSVFIAGKG 87 L IE P D +HG + N AM+ +R L P IAE++ + ++ D IAG G Sbjct: 34 LPAFTIEIPADSSHGDFAANLAMVSARAFKLAPRKIAEILCGELNLNGTFFDRWEIAGPG 93 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FIN +L+ S+ ++ ++V G +YGR+ G G KV +EFVSANPTGPMH+G+ R +G Sbjct: 94 FINFFLNQSWFGSVVEAVVQEGADYGRSEFGGGKKVMVEFVSANPTGPMHIGNARGGAMG 153 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYL 206 D LAS++ ++GY+VT+E+YINDAG QI ALS+ RYQQ D+ LPE Y G + Sbjct: 154 DCLASVLDWAGYDVTKEFYINDAGNQIEKFALSLDVRYQQIYKGEDAVPLPEDAYQGADI 213 Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 K + AD Y + L+ +++ + DY++ + ++ DL I++D++ E H Sbjct: 214 KVHAQNFADLYGDKFLDATQQERRKALVDYALPINIANLKTDLAKYRIEYDVWFKESVLH 273 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 + ++ I+D L +G YE + ++S+ G + D L++ Sbjct: 274 --EEGQVQKIVDILTERGLTYE----------------KEGAIWYKSSEYGSEKDDVLVR 315 Query: 327 SDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 ++G TYFAAD+AY K+ RGFD +I + G+DH G+V RL+ AV ++++V+L Sbjct: 316 ANGIPTYFAADIAYHYNKFAVRGFDRVINIWGADHHGHVARLKGAMDAVGLDGSKLDVVL 375 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 ++VRL RDG P+K+SKR+G ITL ++DEV D+ RF+ R+ + LDFD EQ Sbjct: 376 MQMVRLMRDGEPVKVSKRSGKSITLVSLLDEVPIDAARFIFNLREANSHLDFDLDLAVEQ 435 Query: 446 SKENPVFYVQYAYARCRSIFRQ-AKDIFP---DLDFDLFPRNVIPQESEFDTSELQLIVH 501 S +NPV+YVQYA+AR SI ++ A++ F D DF L P+ E++LI H Sbjct: 436 SSQNPVYYVQYAHARICSILKKLAQEGFSPQEDADFGLL---TAPE-------EIELIRH 485 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 +A P I A A +P ++ Y DLA++FH ++ + V+ ++ +LT RL Sbjct: 486 IARLPGDIVEAAKAYDPARITRYSLDLATLFHKFYNACK-------VKGDDERLTTARLT 538 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 L AV +++ + L+++ +++P M Sbjct: 539 LCDAVRTVLENVLSMLKIDAPESM 562 >gi|325844324|ref|ZP_08168100.1| arginine--tRNA ligase [Turicibacter sp. HGF1] gi|325489191|gb|EGC91573.1| arginine--tRNA ligase [Turicibacter sp. HGF1] Length = 553 Score = 349 bits (895), Expect = 8e-94, Method: Compositional matrix adjust. Identities = 195/556 (35%), Positives = 321/556 (57%), Gaps = 35/556 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90 +++E +D +HG STN AM L++ +P IAE I+ + +V+ + IAG GFIN Sbjct: 31 VILENSKDVSHGDYSTNIAMQLTKIAKKNPRMIAEEILNNFNAESANVEKIEIAGPGFIN 90 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 ++ S + + +I+ G E+G + G G K N+E+VSANPTG +H+GH R A +GD+L Sbjct: 91 FFMKKSAFTQSIKNIIELGHEFGTSKSGNGLKYNVEYVSANPTGDLHLGHARGAALGDSL 150 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ +GY+VTREYY+NDAG QI+ L +S + RY QAL ++++PE Y G + +G Sbjct: 151 CRILTKAGYDVTREYYVNDAGNQIHNLVISAYARYLQAL-GLEAEMPEDGYHGPDIIALG 209 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 + + ++Y L+N +E + ++++ S++ + IR DL ++ D++ SE + + D Sbjct: 210 QSMVEQYGDRLVNKLDENY-KLIREMSLEYELNKIRKDLDMFGVEFDMYTSEQELY--DN 266 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + +++ I L +G++YE + + FRST GDD DR L KSDGS Sbjct: 267 NLVQESIKLLEEKGFIYE----------------EDGAVWFRSTDFGDDKDRVLKKSDGS 310 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTY D+A K +RG D ++ + G+DH GY+ R++A A+ + ++ V + ++VR Sbjct: 311 YTYLTPDIANHIEKLKRGNDKLVDIWGADHHGYIARVKASMQALGYEADKLEVDIIQMVR 370 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L +DG KMSKR G +T+R +VDEVG D+VR+ + R +DFD ++S ENP Sbjct: 371 LIKDGEEFKMSKRTGKAVTIRELVDEVGVDAVRYFFVMRSGETQMDFDLDLATKKSNENP 430 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR-NVIPQESEFDTSELQLIVHLAEYPRVI 509 V+Y QYA+AR SI RQA++ + +L + N I E EF+ +L + ++P V+ Sbjct: 431 VYYAQYAHARTCSILRQAEE--KGFNVELKDQYNHITHEKEFEVIKL-----MGDFPIVV 483 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 +A + P+ + Y+ DLA+ FH ++ + + N + T +L L+ A+ Sbjct: 484 ADAANKRRPHLICNYINDLATAFHSLYNAE------KVINEENVEKTNEKLALIKALEIT 537 Query: 570 INSGLNIIGVESPNEM 585 I + L +IGV +P M Sbjct: 538 IKNALELIGVSAPERM 553 >gi|315659043|ref|ZP_07911910.1| arginine--tRNA ligase [Staphylococcus lugdunensis M23590] gi|315496167|gb|EFU84495.1| arginine--tRNA ligase [Staphylococcus lugdunensis M23590] Length = 555 Score = 349 bits (895), Expect = 9e-94, Method: Compositional matrix adjust. Identities = 209/580 (36%), Positives = 315/580 (54%), Gaps = 45/580 (7%) Query: 15 LKEIDCKIKVEKKILDR----IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 + EI IK + I D+ I IE P+D +G STN AM+L++ +P IA+ IV Sbjct: 12 INEIKTSIKSAELIQDQSIPEIKIEIPKDSKNGDYSTNIAMVLTKLAKRNPREIAQAIVD 71 Query: 71 RI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129 + V V IAG GFIN YL YL I+ + G YG K ++ +E+VS Sbjct: 72 HLDTTKAHVKQVDIAGPGFINFYLDNYYLTAIIPEAISKGAHYGYASEPKNKRILLEYVS 131 Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189 ANPTG +H+GH R A VGD+LA+++ +GY+VTREYYINDAG QI LA S+ R+ +AL Sbjct: 132 ANPTGDLHIGHARNAAVGDSLANILIAAGYDVTREYYINDAGNQITNLARSIETRFFEAL 191 Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249 + +PE Y G + +GK+LA K+ E+ ++ + L + V+ M ++ DL Sbjct: 192 GDTSHKMPEDGYNGKDIIEIGKDLAQKHP-EIKDYSDHDRLKTFRQLGVEYEMVKLKRDL 250 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 N D + SE + D I + + + GY YE K T Sbjct: 251 ADFNAHFDSWFSETTLY--DNGAIENTLARMKENGYTYE------KDGAT---------- 292 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369 R++ DD DR L+KSDGSYTYF D AY K RG D +I +MG+DH GY+ R++A Sbjct: 293 WLRTSDFKDDKDRVLIKSDGSYTYFTPDTAYHYDKINRGNDILIDLMGADHHGYINRIKA 352 Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429 ++ + + ++VRL ++G +KMSKR G+ ITLR ++DEVG D+ R+ + R Sbjct: 353 SLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGVDAARYFLTMR 412 Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVI 485 DFD KEQS++NP++Y QYA+AR SI +QA+ DI D+DF L + Sbjct: 413 SPDSHFDFDMELAKEQSQDNPIYYAQYAHARICSILKQARAQGIDITTDVDFSLITND-- 470 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 + L+ +AE+ +VI+NA + P++L Y+ DLA+ FH ++ + Sbjct: 471 --------KAIDLLKKVAEFEQVIDNAAEHRAPHRLTNYIQDLAAAFHKFYNAEK----- 517 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V ++++ T + L+ AV +++ L ++GV +P M Sbjct: 518 --VLTDHQEKTKALVALIEAVRITLHNALTLVGVSAPESM 555 >gi|73663421|ref|YP_302202.1| arginyl-tRNA synthetase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|109895041|sp|Q49VF3|SYR_STAS1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|72495936|dbj|BAE19257.1| arginyl-tRNA synthetase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 555 Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 202/557 (36%), Positives = 316/557 (56%), Gaps = 37/557 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFIN 90 I IE P+D A+G STN AM+L++ +P IA+ IV + +V+ V IAG GFIN Sbjct: 33 IKIEIPKDDANGDYSTNIAMVLTKIAKRNPREIAQAIVDHLDTTAANVEKVQIAGPGFIN 92 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL +YL +++S + ++G G + +E+VSANPTG +H+GH R A VGDTL Sbjct: 93 FYLDNAYLTEVISEAIDKDEKFGSTAEQNGKNILLEYVSANPTGDLHIGHARNAAVGDTL 152 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+++ +GY VTREYY+NDAG QI LA S+ RY +AL ++ ++PEG Y G + ++G Sbjct: 153 ANILTAAGYHVTREYYVNDAGNQITNLARSIEARYFEALGDDSFEMPEGGYHGKDIINIG 212 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K+LA+K EL + E++ + + V M+ +R DL N D + SE + + Sbjct: 213 KDLAEK-QPELKDLSEDERIKTFRKLGVDYEMEKLRTDLSDFNTHFDNWFSETSLY--EK 269 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I ++++ ++ GY YE D L R+T DD DR L+K+DG+ Sbjct: 270 GEITEVLNKMSELGYTYE---------------QDGATWL-RTTDFKDDKDRVLIKNDGN 313 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTYF D+AY K +RG D +I + G+DH GY+ RL+A + ++ + + ++VR Sbjct: 314 YTYFLPDIAYHFDKIKRGNDTLINLFGADHHGYINRLKASLETFGVESDRLEIQIMQMVR 373 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L +DG +KMSKR G+ ITLR ++DEVG D+ R+ + R DFD K++S++NP Sbjct: 374 LMQDGQEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDTHFDFDMELAKQESQDNP 433 Query: 451 VFYVQYAYARCRSIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 V+Y QYA+AR SI +QA + I P D D +I + D L+ +AE+ Sbjct: 434 VYYAQYAHARICSILKQAAERGITPSKDADY---TLITNDKAID-----LLKKVAEFETT 485 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 I++A + P+++ Y+ DLAS FH ++ + V ++ + T + L+ AV Sbjct: 486 IQSAAANRAPHRITNYIQDLASHFHKFYNAEK-------VLTDDVEKTKALIALIDAVRI 538 Query: 569 IINSGLNIIGVESPNEM 585 + + L+++GV +P M Sbjct: 539 TLRNALSLVGVNAPETM 555 >gi|83942561|ref|ZP_00955022.1| arginyl-tRNA synthetase [Sulfitobacter sp. EE-36] gi|83846654|gb|EAP84530.1| arginyl-tRNA synthetase [Sulfitobacter sp. EE-36] Length = 364 Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 173/360 (48%), Positives = 242/360 (67%), Gaps = 6/360 (1%) Query: 226 EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285 E WL V++++ MMK+IRDDL +L ++ D+F SE + I ID+L +G Sbjct: 10 ESVWLEEVRNFATDEMMKLIRDDLASLGVEMDVFYSEKSLY--GTGRIESAIDDLKAKGL 67 Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345 +YEG+L PPK K + + R+Q LF+ST GDDVDRP++KSDG +TYFA D+AY K Sbjct: 68 IYEGVLEPPKGKKPEDWE-PREQTLFKSTAHGDDVDRPVMKSDGGWTYFAPDIAYHYDKV 126 Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405 +RGFD +I V G+DH GYVKR++A +A+SE +++ L +LV+L+++G KMSKRAG Sbjct: 127 QRGFDRLIDVFGADHGGYVKRMKAAVSALSEGAVPLDIKLTQLVKLFKNGKEFKMSKRAG 186 Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 F+TLR VVD+VG D RF+ML RKN +LDFDF KV EQS+ENPVFYVQYA+AR S+ Sbjct: 187 TFVTLRDVVDQVGPDVTRFVMLTRKNDAMLDFDFAKVLEQSRENPVFYVQYAHARVHSVL 246 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 R+A + D D + R + Q +EL+L LAE+PR++E A + EP+++AFYL Sbjct: 247 RKAAEAGVDTDIETLQRADLSQLDH--EAELKLAQKLAEWPRMVETAARSNEPHRIAFYL 304 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 Y+LA FHG W+ G + P LRF+Q ++ L+ ++ L A A +I SGL I+GV+ EM Sbjct: 305 YELAGDFHGLWNRGNDVPELRFLQ-DDAALSQSKIALAQAAAIVIASGLGILGVKPAEEM 363 >gi|78043915|ref|YP_358996.1| arginyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901] gi|109894979|sp|Q3AFT8|SYR_CARHZ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|77996030|gb|ABB14929.1| arginyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901] Length = 557 Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 196/556 (35%), Positives = 315/556 (56%), Gaps = 38/556 (6%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +E+P++ AHG L+TN AM+L++ +P IA ++ ++I V+ V IAG GFIN Y Sbjct: 36 LEKPKEKAHGDLATNLAMLLTKKARKNPREIAATLLEYLEIPAVVERVEIAGPGFINFYF 95 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 ++ ++ I+ G +YGR IG G +V +EFVSANPTG +H+G+ R A +GD LA++ Sbjct: 96 KKDWVVAVIPEILSFGEKYGRLAIGAGKRVQVEFVSANPTGLLHMGNGRGAALGDILANI 155 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + +GYEV+REYYINDAG QI SV RY + L + PE Y G + + + Sbjct: 156 LTEAGYEVSREYYINDAGNQIENFNKSVEARYLE-LLGYKVEFPEEGYHGEDIIDTARNI 214 Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273 ++ ++ PE++ + +++ ++ I+ L+ +++D++ SE H + + Sbjct: 215 VARFGDRFIHLPEKERQEALGKIALEEKLQSIKKSLENFGVKYDVWFSERSLH--ESGEV 272 Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333 + L +GY+YE L F ++ +G++ D L++ +G TY Sbjct: 273 EKTVKLLLERGYLYE----------------KDGALWFAASKLGEEKDEVLVRKNGVPTY 316 Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393 +AAD+AY K K++RGFD +I + G+DH G+V R++ A+ ++ V+L +LVRL++ Sbjct: 317 YAADIAYHKNKFDRGFDLVINIWGADHHGHVSRMKTALKALGYDPERLIVILMQLVRLFQ 376 Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453 G ++MSKR G +ITL +V+EVG D+ R+ + R + LDFD KE+S ENPV+Y Sbjct: 377 GGELVRMSKRTGQYITLDELVEEVGVDAARYFFVMRSHDAHLDFDLDLAKEKSNENPVYY 436 Query: 454 VQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 +QYA+AR S++RQ + + P D DL ++ E +EL L+ HLAE+P I Sbjct: 437 IQYAHARIMSLYRQCNEQGVTLPPVEDVDL---AILSSE-----AELNLLRHLAEFPVEI 488 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 E A P+ LA YL++LA FH ++ R V L+ RL LV A + Sbjct: 489 EKCATALAPHHLARYLHELAGYFHTFYNSCR-------VLGVEENLSKARLLLVEATRIV 541 Query: 570 INSGLNIIGVESPNEM 585 + GL ++GV +P +M Sbjct: 542 LRKGLKMLGVSAPEKM 557 >gi|310639600|ref|YP_003944358.1| arginyl-tRNA synthetase 1 [Paenibacillus polymyxa SC2] gi|309244550|gb|ADO54117.1| Arginyl-tRNA synthetase 1 [Paenibacillus polymyxa SC2] Length = 559 Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 203/567 (35%), Positives = 312/567 (55%), Gaps = 39/567 (6%) Query: 24 VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVF 82 V ++ L I +E P+D +HG L+TN AM L+R +P IAE ++A + + ++S Sbjct: 27 VSREELPTITLEVPKDKSHGDLATNVAMQLTRIAKKNPRQIAEDLIANMDLASASIESAE 86 Query: 83 IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 IAG GFIN L+ SYL ++ + G +YGR +G G KV IEFVSANPTG +H+GH R Sbjct: 87 IAGPGFINFRLNKSYLYAVIGQVQEQGADYGRVQVGAGKKVQIEFVSANPTGSLHLGHAR 146 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202 A VGD L +++ F+GY+VTREYYINDAG QI ++ S+ RY Q L +++PE Y Sbjct: 147 GAAVGDALCNVLDFAGYQVTREYYINDAGNQIYNMSRSIEARYLQEL-GQPAEMPEDGYH 205 Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262 G + KEL + LL+ ++Y ++ + I+ DL+ + D + SE Sbjct: 206 GEDIIGFAKELVAEKGDSLLSMEPGDRAAYFREYGLEKELNKIKRDLERFRVPFDSWFSE 265 Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322 + D + ++ L + +Y D D L +T GDD DR Sbjct: 266 TSLY--DNGEVLKALNELRDREEIY---------------DKDGATWL-NTTKYGDDKDR 307 Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 L+K+DG+YTY D+AY + KY RG+D +I + G+DH GY+ R++A A+ ++ Sbjct: 308 VLIKNDGTYTYLTPDIAYHRDKYARGYDTIINIWGADHHGYIPRMKAAMEALGNDPDKLK 367 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 VL+ ++V L+++G +KMSKR G +T+ +++EVG D++R+ R LDFD Sbjct: 368 VLIAQMVSLFQNGEKVKMSKRTGKAVTMEDLMEEVGVDAIRYFFTMRSMDSHLDFDMDLA 427 Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQL 498 S ENPVFYVQYA+AR S++RQA++ + P + DL + + E E+D L Sbjct: 428 ISTSNENPVFYVQYAHARACSVYRQAEEQGIAVLPLAEVDL---SKLTAEHEYD-----L 479 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 + + E P + A P+++ Y+Y+LAS+FH ++ R V + T Sbjct: 480 LRKIGELPEEVSVAAANFAPHRMIRYVYELASMFHSYYKAER-------VITEDAAQTQA 532 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 RL L AV + I + L ++GV +P M Sbjct: 533 RLALFGAVRTTIANVLKLVGVSAPERM 559 >gi|284992535|ref|YP_003411089.1| arginyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160] gi|284065780|gb|ADB76718.1| arginyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160] Length = 553 Score = 348 bits (892), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 200/557 (35%), Positives = 296/557 (53%), Gaps = 45/557 (8%) Query: 36 RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95 RP++ HG +TN A+ L++P G P +AEL+ ++ P + SV +AG GF+N+ L+ Sbjct: 35 RPKNPEHGDYATNVALRLAKPAGRPPREVAELLAGELRAHPGIASVDVAGPGFLNITLAQ 94 Query: 96 SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155 L +I V +G YG G ++N+EFVSANPTGP+H+G R A VGD L L+ Sbjct: 95 GALGRIAVDAVTAGPAYGHTGTLAGQRLNLEFVSANPTGPVHIGGTRWAAVGDALGRLLE 154 Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215 SG VTREYY NDAGAQI+ A S+ +PE Y G Y+ + ++ Sbjct: 155 ASGASVTREYYFNDAGAQIDRFARSLM------AAAVGRPVPEDGYAGDYIGEIAAQVV- 207 Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275 +L P+E+ ++ V+ M I+ L A ++ D++ SE H + + Sbjct: 208 AAEPGVLELPDEQQQERFRERGVELMFAEIKRTLAAFGVEFDVYFSERTLH--ETGALEK 265 Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335 I L G+VYE R+T GDD DRPL+KSDG TYFA Sbjct: 266 AIARLRENGHVYEA----------------DGATWLRTTDFGDDKDRPLVKSDGDPTYFA 309 Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK-KAQINVLLCELVRLYRD 394 AD AY+ K RGFD ++ ++G+DH+GYV R A+ AAV + A + +LL +LV L RD Sbjct: 310 ADCAYYLDKRSRGFDKVVIMLGADHAGYVGRYRALVAAVGDDPDANLEILLGQLVNLVRD 369 Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454 G P++MSKRAG + L +V+ VG+D+ R+ + + +D D Q+ +NPVFYV Sbjct: 370 GEPVRMSKRAGTVVLLEDLVEAVGADAARYALARASVDQQIDLDLDLWSRQTNDNPVFYV 429 Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ------LIVHLAEYPRV 508 QYA+AR S+ R A D+ L + + D ++L L+ L E+PRV Sbjct: 430 QYAHARISSVLRNAADLGIALG----------EPGDVDAAQLTHERENALLRALGEFPRV 479 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 + +A + P+++A YL +LA +H + R PR LT+ RL L A A Sbjct: 480 LTSAAELRAPHRVARYLEELAGTYHRFYDSCRVLPR---GDEETTPLTVARLWLCAATAV 536 Query: 569 IINSGLNIIGVESPNEM 585 ++ +GL ++GV +P M Sbjct: 537 VLRNGLGVLGVSAPERM 553 >gi|27379868|ref|NP_771397.1| arginyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110] gi|27353021|dbj|BAC50022.1| arginyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110] Length = 416 Score = 348 bits (892), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 174/358 (48%), Positives = 239/358 (66%), Gaps = 4/358 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 ++LFAD +R+ + + + I R+V+E PRD +HG ++TNAAM+L++ Sbjct: 8 LHLFADVLARVHAACRALAADASWPEGIDFSRVVVEPPRDASHGDMATNAAMVLAKEAKA 67 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +AE I R++ D + V +AG GFINL L P+ + L +++ G +YGR + Sbjct: 68 KPRDLAEQIAERLRADALIAKVDVAGPGFINLTLKPAAWAEALRTVLREGADYGR--VRG 125 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G+KVN+E+VSANPTGPMHVGHCR AV GD LASL+ F G++VTREYYINDAGAQ++ LA Sbjct: 126 GSKVNVEYVSANPTGPMHVGHCRGAVFGDALASLLQFGGHDVTREYYINDAGAQVDVLAR 185 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY++AL + +PEG YPG YLK VG+ LA ++ +L E +WLP V+ ++ Sbjct: 186 SAFLRYREALGEDIGAIPEGLYPGDYLKPVGQALAKEHGDKLRAMTEAEWLPTVRAKAIA 245 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM I+DDL ALNI+HD+F SE + + + ID L +G +YEG LPPPK Sbjct: 246 MMMDEIKDDLAALNIRHDVFFSERSLIESGNNKVAETIDFLKAKGDIYEGRLPPPKGAPV 305 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 + + DR+QLLF++T GDDVDRPL+KSD SYTYFA+D+AY K K++RGF MI V G Sbjct: 306 EDWE-DREQLLFKATAYGDDVDRPLIKSDNSYTYFASDIAYHKNKFDRGFAEMIDVWG 362 >gi|46204894|ref|ZP_00209613.1| COG0018: Arginyl-tRNA synthetase [Magnetospirillum magnetotacticum MS-1] Length = 311 Score = 348 bits (892), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 175/313 (55%), Positives = 229/313 (73%), Gaps = 2/313 (0%) Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195 MHVGH R AV GD LA+L+A +G VTREYYINDAGAQ++ LA S F RY++AL + Sbjct: 1 MHVGHGRGAVFGDALANLLAAAGRPVTREYYINDAGAQVDVLARSAFLRYREALGETIA- 59 Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255 +PEG YPG YLK VG LA + LL+ PE +WLP+V+ +++ AMM IR+DL A+ I+ Sbjct: 60 IPEGLYPGDYLKPVGAALAQAHGRALLDKPEAEWLPLVRRFAIDAMMDTIREDLAAIGIR 119 Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315 HD+F SE + + ++++ L +G VYEG LPPPK + + DR+Q LFRST Sbjct: 120 HDVFFSEATLQGENGGKVAELLEALRAKGLVYEGHLPPPKGQLPDDWE-DREQTLFRSTQ 178 Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375 GDDVDR LLKSDGSYTYFA+D+AY + K+ RG + +I V+G+DH GYVKR++A AVS Sbjct: 179 FGDDVDRALLKSDGSYTYFASDIAYHRDKWLRGANELIDVLGADHGGYVKRMQAAVKAVS 238 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435 + +A+++V LC+LVRL R G P+KMSKRAG+FITLR V+DEVG D++RFMML+RKN L Sbjct: 239 DGEARLDVKLCQLVRLLRAGEPVKMSKRAGEFITLREVIDEVGRDAIRFMMLYRKNDATL 298 Query: 436 DFDFCKVKEQSKE 448 DFD KV EQSK+ Sbjct: 299 DFDLAKVVEQSKD 311 >gi|121999194|ref|YP_001003981.1| arginyl-tRNA synthetase [Halorhodospira halophila SL1] gi|166232793|sp|A1WZR7|SYR_HALHL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|121590599|gb|ABM63179.1| arginyl-tRNA synthetase [Halorhodospira halophila SL1] Length = 584 Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 213/590 (36%), Positives = 321/590 (54%), Gaps = 66/590 (11%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 L + +ER RD AHG + N AM+L++P P +AE I +R+ + V IAG GF Sbjct: 28 LPEVQVERARDRAHGDYAANTAMVLAKPARQKPRDLAETIRSRLPASEAIAGVEIAGPGF 87 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 +N L+ + ++ + + G EYGR+ +G G +V+IEFVSANPTGP+HVGH R A GD Sbjct: 88 LNFTLTTAARQESVRVALRQGAEYGRSDVGAGHRVHIEFVSANPTGPLHVGHGRGAAFGD 147 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 LAS++ +GY V REYY+NDAG Q++ LA S++ RY +A P Y G Y+ Sbjct: 148 ALASVLEAAGYHVHREYYVNDAGRQMDILAASLWLRYLEAA-GEPVSFPNKGYQGDYIVT 206 Query: 209 VGKEL--AD-----KYSSEL-LNFPEEKWLP---------------------IVKDYSVQ 239 +EL AD + ++EL P E P V D++++ Sbjct: 207 HARELFEADGREHVRTAAELGAGLPAEDDDPEGYLDALVARSRELLGETAYRRVLDFALE 266 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 A++ IR DL A + + + SE D I ++ L + GY Y Sbjct: 267 AILGDIRADLDAFGVHYHRYFSERQLV--DQGRIEHALERLDQAGYTY------------ 312 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + D L F++++ GDD DR L + +G TYFAAD+AY K ERGFD ++ V G+D Sbjct: 313 -RAD---GALWFQASVFGDDKDRVLRRDNGLTTYFAADVAYHLDKIERGFDTLVNVWGAD 368 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYV R++A A+ +++V L + LYR G + MS R+G+F+TLR + DEVG Sbjct: 369 HHGYVPRVQAALKALGVDAERLDVRLVQFAILYRGGEKLPMSTRSGEFVTLRELRDEVGK 428 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ RF + R++ + +DFD K +S +NPV+Y QYA+AR S+FRQ L+ Sbjct: 429 DAARFFYVMRRSEQHMDFDLDLAKSESADNPVYYCQYAHARICSVFRQ-------LEERG 481 Query: 480 FPRNVIPQESEFD----TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 V P E+ + E L+ L YP VIE+A +A+EP+++A YL +LA+ FH + Sbjct: 482 LACRVTPDEAALERLDAEHEAILLDLLGRYPEVIESAALAREPHQVAQYLRELAAAFHTY 541 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + F+ ++ L RL LV A ++ +GL ++GV++P M Sbjct: 542 YN------AVPFI-IDDEALRDARLTLVQATRQVLANGLGLLGVDAPQSM 584 >gi|319790089|ref|YP_004151722.1| arginyl-tRNA synthetase [Thermovibrio ammonificans HB-1] gi|317114591|gb|ADU97081.1| arginyl-tRNA synthetase [Thermovibrio ammonificans HB-1] Length = 547 Score = 347 bits (890), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 197/562 (35%), Positives = 315/562 (56%), Gaps = 42/562 (7%) Query: 28 ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87 + +R +E+P+ G +TN A +L++ + +P +A+ + A++ + + V +AG G Sbjct: 24 VAERATVEKPKKSEFGDFATNVAFLLAKVVRQNPRVVAQELAAKLSGVEEFEKVEVAGGG 83 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FIN +LS +L +V + ++ + +G G KV +E+VSANPTGP+HVGH R AVVG Sbjct: 84 FINFFLSQKAYENLLVQVVET--DFYVSDVGGGEKVLLEYVSANPTGPLHVGHGRGAVVG 141 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D L +M +GY RE+YINDAG QI L LS++ R +Q L + +LPE Y G Y+ Sbjct: 142 DVLYRIMRLTGYVPEREFYINDAGRQIRLLGLSIYLRAKQ-LKGENVELPEDAYRGDYIV 200 Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 + K+L ++ +LL+ PEE+ + + + + ++K I DLK L ++ D + SE H Sbjct: 201 ELAKKLLEEVRPDLLDLPEEEAVEVAAQFGKEELLKEIEADLKKLRVEFDNWFSEKSLH- 259 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 D I +++ L +G +YE L ++T+ GDD DR + +S Sbjct: 260 -DSGKIEEVLKLLEEKGLLYE----------------KDGALWLKTTLFGDDKDRVVKRS 302 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387 G YTYFAAD+AY K +RG+D + V G+DH GY+ R+EA A+ + + V+L + Sbjct: 303 TGEYTYFAADIAYHYDKLKRGYDRAVDVWGADHHGYIPRVEAALKALGAPEGWLEVVLIQ 362 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 +V+L++ G +KMSKR GDF+ LR ++++VG D VRF L +++ LDFD S Sbjct: 363 MVKLFKGGKEVKMSKRKGDFVPLRWLMEQVGVDPVRFFFLLKRHDTPLDFDLDLAVSTSS 422 Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT----SELQLIVHLA 503 +NPV+YVQYA+AR S+ +AK+ R +P + D E +LI Sbjct: 423 DNPVYYVQYAHARLCSVLDKAKE-----------RGFLPSKENLDLLSSDEERKLITGCY 471 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 + ++ A +EP++L +YL +LAS H ++ + + + +N +LT RL LV Sbjct: 472 QLKYELQQAAQKREPHRLTYYLIELASTLHRFYN------KHKVINEDNPQLTRARLYLV 525 Query: 564 HAVASIINSGLNIIGVESPNEM 585 AV + +GL I+ V +P M Sbjct: 526 EAVRKTVATGLAILNVSAPRRM 547 >gi|291279741|ref|YP_003496576.1| arginyl-tRNA synthetase [Deferribacter desulfuricans SSM1] gi|290754443|dbj|BAI80820.1| arginyl-tRNA synthetase [Deferribacter desulfuricans SSM1] Length = 543 Score = 346 bits (888), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 207/557 (37%), Positives = 312/557 (56%), Gaps = 42/557 (7%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IE P+D +G +TN AM L++ +P IA +V I+ D +D + IAG GFIN + Sbjct: 25 IIEIPKDSKNGDFATNVAMKLAKVFKKNPRDIASDLVTNIEKDNFIDKIEIAGPGFINFF 84 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 ++ Y I+ V+ Y G+ +V +EFVSANPTGP+H+GH R A GDTLA Sbjct: 85 INKKYFESIIEQ-VLKDENYFVLDFGENKRVLVEFVSANPTGPLHIGHGRGAAYGDTLAR 143 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 L+ +G++V +EYYINDAG Q+ L S+ RY+Q + ++ +GY G Y+ + K+ Sbjct: 144 LLRVAGFQVEKEYYINDAGNQMKMLGDSIVTRYKQLVNGKIEEMQDGY-RGEYIIDIAKK 202 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD-FHRGDPS 271 + ++Y LL+ PE K I + +MK I DDL + D + SE F +G Sbjct: 203 IYEEYGDSLLDDPE-KCFNICFKTGLDEIMKSIVDDLDDFRVSFDRWFSEKSLFEKGVVD 261 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 I+D GY+YE + F+ST GD+ DR + K+DGSY Sbjct: 262 KALSILD---ENGYLYE----------------KDGAVWFKSTSFGDEKDRVVKKADGSY 302 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 TYFA+D+AY K ERG+D + V G+DH GY+ R+ A+ + ++L ++V L Sbjct: 303 TYFASDIAYHLNKIERGYDLFVNVWGADHHGYMNRMFGALKALGAPDDILKIVLIQMVNL 362 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 + G I MS RAG+FITLR ++DEVG+D+ RF L R ++ DFD K +S +NPV Sbjct: 363 VKGGERISMSTRAGEFITLRWLIDEVGADAARFFYLMRDHNAQFDFDIDLAKSKSSDNPV 422 Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDL---FPRNVIPQESEFDTSELQLIVHLAEYPRV 508 +YVQYA+AR S+F A I ++F L + + QE E +I + E +V Sbjct: 423 YYVQYAHARVNSLFENA--IEKGVEFRLAENLDKLTLDQEKE-------IIKKIDELKKV 473 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 I+ A EP+++++YL +LAS+FH ++ + + + +++ +LT RL L AVA Sbjct: 474 IKAAATHLEPHRISYYLQELASLFHNYYYNFK-------IISDDYELTNARLNLAKAVAK 526 Query: 569 IINSGLNIIGVESPNEM 585 I GL I+GVE+P +M Sbjct: 527 TIKFGLEILGVEAPEKM 543 >gi|258405440|ref|YP_003198182.1| arginyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692] gi|257797667|gb|ACV68604.1| arginyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692] Length = 551 Score = 346 bits (887), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 200/561 (35%), Positives = 316/561 (56%), Gaps = 46/561 (8%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIA----ELIVARIKIDPDVDSVFIAGKGFI 89 ++ P+D G +++N AM+L++ G P +A E ++ R D++ IAG GF+ Sbjct: 28 LDTPKDPNFGDVASNLAMVLAKQAGQKPRDLAASLREEVLQRGAAIQDIE---IAGPGFL 84 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N++ P++ ++ +S I +G YG++ +G+G V +E+VSANPTGP+H+GH R A VGD+ Sbjct: 85 NVFFKPAFWQQTVSVIQEAGQSYGQSDMGQGKTVQVEYVSANPTGPLHIGHGRGAAVGDS 144 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 LA ++ +G+ VT EYY+NDAG Q+ L S+ +R + L D+ PE +Y G Y++ + Sbjct: 145 LARILRRTGHTVTTEYYLNDAGRQMQILGASIAYRVLELLGGPDT-FPEDHYQGGYIRDL 203 Query: 210 GKELADKYSSEL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 +EL D + L +++PE L + + + +++ I+ DL+ ++H ++ SE Sbjct: 204 AQELVDTRGASLSAMDWPE--LLEHCRQHGLTRILEGIKRDLRDFRVEHQVWFSEQSLL- 260 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 D + + +LA +G YE L F ST GDD DR L KS Sbjct: 261 -DKGRVEATLTDLANRGLAYE----------------QDGALWFASTTFGDDKDRVLRKS 303 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387 DG TYFA+D+AY KY RGFD ++ + G+DH GYV R++ A+ + V+L + Sbjct: 304 DGDLTYFASDIAYHADKYARGFDTVVDIWGADHHGYVPRMKGAVQALGRASEDLQVILVQ 363 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 LV L RDG + MS RAG F TL V EVG D+ RF+ L RK+ LDFD VK QS Sbjct: 364 LVNLLRDGEQVSMSTRAGKFETLADVCAEVGPDAARFIFLSRKSDSHLDFDLELVKRQSM 423 Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE-SEFDTSE-LQLIVHLAEY 505 +NPV+YVQYA+AR S+ R+ + F+ PR V + + DT+E + L L + Sbjct: 424 DNPVYYVQYAHARINSVLRKG----AERGFE--PRPVSEADLALLDTAEDMDLFKKLDRF 477 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHW-SHGRENPRLRFVQANNRKLTMMRLQLVH 564 P V++ A P+ ++FYL +LA + H ++ +H + A + L R L+ Sbjct: 478 PEVVQGAARTLSPHHVSFYLQELAGLLHRYYNTHS-------VLYAESDALLQARFHLLL 530 Query: 565 AVASIINSGLNIIGVESPNEM 585 AV ++++GL ++GV +P +M Sbjct: 531 AVRQVLHNGLELLGVHAPEQM 551 >gi|319891595|ref|YP_004148470.1| Arginyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03] gi|317161291|gb|ADV04834.1| Arginyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03] Length = 552 Score = 346 bits (887), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 200/559 (35%), Positives = 308/559 (55%), Gaps = 42/559 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFIN 90 I IE P+D +G +TN AM+L++ +P IA+LIV + + V + IAG GFIN Sbjct: 31 IKIEIPKDTKNGDYATNIAMVLTKLAKRNPREIAQLIVDHLDTEAAHVKKIDIAGPGFIN 90 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL SYL ++ + ++GR K K+ +E+VSANPTG +H+GH R A VGDTL Sbjct: 91 FYLDSSYLNAVIDQALELDTQFGRVAESKNKKILVEYVSANPTGDLHIGHARNAAVGDTL 150 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +++ +GY+VTREYYINDAG QI LA S+ RY Q L +++P Y G +K++G Sbjct: 151 CNILDAAGYDVTREYYINDAGNQITNLAKSIEARYLQHL-GQKAEMPADGYHGQDIKNIG 209 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 +LA K + L++ +++ L + V M ++ DL NI D + SE + + Sbjct: 210 ADLAKKQPN-LMDLSDDERLKTFRQLGVDYEMAKLKQDLADFNIHFDNWFSETSLY--EK 266 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I+ +++ + GY YE D L R+T DD DR L+K DG+ Sbjct: 267 GEIKAVLERMKENGYTYE---------------QDGATWL-RTTDFKDDKDRVLIKKDGT 310 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTYF D+AY K++RG DN+I + G+DH GY+ RL+A ++ + + ++VR Sbjct: 311 YTYFLPDIAYHYDKFQRGNDNLINLFGADHHGYINRLKASLETFGVDSDRLEIQIMQMVR 370 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L +DG +KMSKR G+ ITLR ++DEVG D+ R+ + R DFD KEQS++NP Sbjct: 371 LMQDGEEVKMSKRTGNAITLREIMDEVGIDAARYFLTMRSADTHFDFDMALAKEQSQDNP 430 Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 V+Y QYA+AR SI RQA+ + D+ + ++L+ +AE+ Sbjct: 431 VYYAQYAHARICSILRQAEAQGYQVEKGADYQTITND----------KAIELLKKVAEFE 480 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 +IE A A+ P+++ Y+ DLA+ FH ++ + V ++ T L L+ AV Sbjct: 481 PMIEGAAEARAPHRVTNYIQDLAAHFHKFYNAEK-------VLTEDQAKTKAHLALIDAV 533 Query: 567 ASIINSGLNIIGVESPNEM 585 + + L ++GV +P +M Sbjct: 534 RITLRNALQLVGVTAPEQM 552 >gi|258592259|emb|CBE68568.1| arginyl-tRNA synthetase [NC10 bacterium 'Dutch sediment'] Length = 557 Score = 345 bits (886), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 209/563 (37%), Positives = 306/563 (54%), Gaps = 48/563 (8%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90 + E P D G LST A L++ L P IA I A D VD V +AG G++N Sbjct: 34 MTWEYPSDPVFGDLSTTLAFGLAKALRQRPRDIAMQIAASAAFPSDLVDRVEVAGAGYLN 93 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +++ + R + I+ +G YGR +G G V +EFVSANPTGP+ V + R A +GD + Sbjct: 94 FFIARPFWRHLAQEILRAGPTYGRADVGGGRPVLVEFVSANPTGPLVVVNARAAAIGDAI 153 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A L+ G+ REYY+NDAG Q TLAL++ R +Q L D +PE YPG YL + Sbjct: 154 ARLLEAIGHRPYREYYVNDAGNQFRTLALAMEVRCRQ-LQGEDCPMPEEAYPGEYLIDLA 212 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF-HRGD 269 +E D++ E+L+ PE + + ++V+ +++ R L+A + D + SE + RGD Sbjct: 213 REFLDQHGPEVLSAPEPERRDRLGRFAVERIIEWQRASLEAYGVTFDGWFSERNLRERGD 272 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + +I+ L + ++YE + FRST+ GDD DR L+K DG Sbjct: 273 TT---QVIEALKARSFLYE----------------QDGAVWFRSTLFGDDKDRVLVKGDG 313 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 TYF D+AY + K+ RGF +I + G DH GYV R++A A+ + +L+ +LV Sbjct: 314 EITYFLPDIAYHQDKFARGFAQVIDLWGPDHHGYVPRMQAAMQALGHPPGALKILIVQLV 373 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 RL R ++MSKRAG F+T+ +VDEVG D+ R+ L R+ LDFD VK S+EN Sbjct: 374 RLMRGTEQVRMSKRAGQFVTMGELVDEVGRDAARYTFLTRRCDSQLDFDLELVKSASEEN 433 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT-------SELQLIVHL 502 PV+YVQYA+ R I R+A R +P S D E+ LI L Sbjct: 434 PVYYVQYAHTRLCGILREAT------------RAQLPVPSPEDNLDRLDLPEEIGLIKQL 481 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 A YP ++ A A EP++L YL+DLA+ FHG+++ R R + A+ LT RL L Sbjct: 482 ALYPELVIGAAQALEPHRLTTYLHDLAAQFHGYYA------RHRIISADT-NLTRARLTL 534 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 V A+ ++ + L ++GV +P M Sbjct: 535 VAALRVVMANTLGLLGVSAPERM 557 >gi|225850150|ref|YP_002730384.1| arginyl-tRNA synthetase [Persephonella marina EX-H1] gi|225646328|gb|ACO04514.1| arginyl-tRNA synthetase [Persephonella marina EX-H1] Length = 552 Score = 345 bits (886), Expect = 9e-93, Method: Compositional matrix adjust. Identities = 201/563 (35%), Positives = 327/563 (58%), Gaps = 36/563 (6%) Query: 27 KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK 86 ++ ++I +E P++ G +S NAA +LS+ L PL IA+ I ++ + V +AG Sbjct: 22 EVEEKIKVEIPKEDRFGDISINAAFLLSKILRDKPLNIAQRIKNILENVEEFSKVEVAGA 81 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GFIN++LS + IL I+ YGR+ +G +N+EFVSANPTGP+H+GH R AVV Sbjct: 82 GFINIFLSRKFYADILKRIIQEKENYGRSEKKEGY-INVEFVSANPTGPLHLGHGRGAVV 140 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206 G+ +++L ++GY V RE+YINDAG QI L SV+ R++Q + D PE Y G Y+ Sbjct: 141 GNVVSNLYEYAGYTVEREFYINDAGRQIYKLGESVYARFRQ-IDQPDYPFPEDGYHGEYI 199 Query: 207 KHVGKELADKYSSELLNFPEEKW-LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 K + + L ++L+ +EK + +++ +++ I++DLK + DI+ SE Sbjct: 200 KEIAQHLYKYEKEKILSMVDEKQAIDFCSEFAKDMLLERIKEDLKEFGVTFDIWFSERSL 259 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 + + + I+ L ++G +YE + ++T+ GDD DR ++ Sbjct: 260 Y--SSGKVDEAIEFLRKKGLIYE----------------KEGAVWVKTTLFGDDKDRVII 301 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 KSDGSYTYFA D+AY K++RG+D +I V G+DH GY RL++ A ++ I V+ Sbjct: 302 KSDGSYTYFAGDIAYHYDKFKRGYDFIINVWGADHHGYFPRLKSAVMAFGVREDWIRVIF 361 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 +LV+L+++G IKMSKR+G F+TL+ ++DEVG D+V + L + L+FD ++ Sbjct: 362 IQLVKLFKEGKEIKMSKRSGSFVTLKELIDEVGKDAVIYFFLTKDPDTHLNFDIDLALKK 421 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIF---PDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 S ENPV+YVQYA+AR S+FR+AK+ F P+ DFD +++ ++ E ++ HL Sbjct: 422 SSENPVYYVQYAHARICSVFREAKERFGFDPENDFDA-DIDLLKED-----QERVIMKHL 475 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 + P +I A + ++P+KL YDLAS FH ++++ +F+ + KL RL L Sbjct: 476 SFIPDLIMEAALKEQPHKLTQITYDLASDFHYYYNN------FKFLVEEDEKLMRARLYL 529 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 + AV + + ++G+ M Sbjct: 530 LKAVREALRTLFKLMGITPVERM 552 >gi|160914601|ref|ZP_02076815.1| hypothetical protein EUBDOL_00608 [Eubacterium dolichum DSM 3991] gi|158433141|gb|EDP11430.1| hypothetical protein EUBDOL_00608 [Eubacterium dolichum DSM 3991] Length = 547 Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 201/559 (35%), Positives = 304/559 (54%), Gaps = 37/559 (6%) Query: 28 ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGK 86 + + IVIE PRD +HG STN AM L+R L +P IA+ I+ + D +++S IAG Sbjct: 25 VAEDIVIEIPRDLSHGDYSTNMAMQLTRILKNNPRVIAQGIIEHLDHDAANIESCEIAGP 84 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GFIN + + + +I++ ++ +G YG N GKG KVN+E+VSANPTG +H+GH R A Sbjct: 85 GFINFVIRKTSMAEIIARVLEAGDHYGENETGKGQKVNVEYVSANPTGDLHLGHARGAAW 144 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206 GD++ LM SGY+V REYY+NDAG QI L LS+ RY++ L D LPE Y G + Sbjct: 145 GDSITRLMKASGYDVCREYYVNDAGNQIINLGLSLQARYREYL-GMDFTLPEDGYHGEDV 203 Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 K + LA +Y E + L K+ ++ + I+ DL + D++ SE Sbjct: 204 KKIAIALAKEYG-EAYAEENDANLKFFKEKGIEFELNKIKRDLDYFRVHFDVWSSEQAIR 262 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 D + + L +G YE + L F +T GDD DR L K Sbjct: 263 --DAGKVETALAQLHEKGLTYE----------------EDGALWFATTKFGDDKDRVLRK 304 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386 DGSYTY D+AY K K +RGFD ++ ++G+DH GY+ RL+A A+ ++ V + Sbjct: 305 KDGSYTYLVPDIAYHKDKLDRGFDLLVDLLGADHHGYIPRLKASIEALGNDPDKLQVDII 364 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446 ++VRL +G +KMSKR G+ +T+R + DEVG D+VR+ + R DFD ++QS Sbjct: 365 QMVRLVENGEEVKMSKRLGNAVTIRELCDEVGVDAVRYFFVQRAVDTHFDFDLGLARKQS 424 Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 +NPV+Y QYA+AR SI RQA + P ++L E+ L+ ++ E+ Sbjct: 425 NDNPVYYAQYAHARICSILRQAPQLAPAQSYELLTHE----------KEIALMKYINEFS 474 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 V+ +A + P+++ Y+ LA FH ++ + + NN L+ R+ L+ A Sbjct: 475 GVVSDAAKYRAPHRVCNYVQKLAQHFHSFYN------ACKVIDMNNEALSAQRIALLKAT 528 Query: 567 ASIINSGLNIIGVESPNEM 585 + + L IGVE+ +M Sbjct: 529 KITLKNALAFIGVEATEKM 547 >gi|254479329|ref|ZP_05092667.1| arginyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653] gi|214034722|gb|EEB75458.1| arginyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653] Length = 555 Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 198/560 (35%), Positives = 316/560 (56%), Gaps = 40/560 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90 + +E P++ HG L+TN AM+++R + P IAE+I +++ ++ V +AG GFIN Sbjct: 30 VEVEEPKEKQHGDLATNFAMVMAREAKMAPRKIAEIITSKMNTSGTFIEKVEVAGPGFIN 89 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +L+ ++L + L I G +YGR +GKG KV +EFVSANPTGPMH+G+ R +GD L Sbjct: 90 FFLNQNFLIETLKLIHKRGKDYGRVNLGKGKKVQVEFVSANPTGPMHMGNARGGAIGDVL 149 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 AS++ ++GY V+RE+YINDAG QI S+ RY Q L D+++PEG Y G + Sbjct: 150 ASILDYAGYNVSREFYINDAGNQIEKFGYSLEARYLQ-LLGIDAEVPEGGYHGEDIIDRA 208 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 KE + Y + + P E+ + +Y ++ ++ +++DL I++D++ SE + D Sbjct: 209 KEFLEIYGDKYKDVPSEERRKALIEYGLKKNIEKMKEDLALYGIEYDVWFSEQSLY--DS 266 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + +I+ L +GY YE L F+ T+ G + D L++S+G Sbjct: 267 GEVYKVIEELTEKGYTYE----------------KDGALWFKMTLFGAEKDDVLVRSNGI 310 Query: 331 YTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 TY A+D+AY K K+ RGFD +I V G+DH G++ ++ A+ +++V+L +LV Sbjct: 311 PTYLASDIAYHKNKFVTRGFDWVINVWGADHHGHIAPMKGAMKALGIDPNRLDVVLMQLV 370 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 +L G ++MSKR G ITLR +++EVG D+ RF R ++FD K+Q+ EN Sbjct: 371 KLIEGGQVVRMSKRTGKMITLRDLIEEVGKDAARFFFNMRSPDSPIEFDLDLAKQQTNEN 430 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDL----DFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 PVFYVQYA+AR SI RQ +++ + D DL ++ +E E D LI LA + Sbjct: 431 PVFYVQYAHARICSIIRQLEEMGVKIENIEDVDL---GLLKEEEEVD-----LIKKLAYF 482 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 P I A P+++ Y+ D+AS+FH ++ R V+ L R L+ A Sbjct: 483 PEEITIAAKTLAPHRITRYVIDVASLFHSFYNSHR-------VKGAEENLMKARFALILA 535 Query: 566 VASIINSGLNIIGVESPNEM 585 V +++ + L+I+ V +P M Sbjct: 536 VKTVLKNALDILKVTAPERM 555 >gi|242372836|ref|ZP_04818410.1| arginyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1] gi|242349455|gb|EES41056.1| arginyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1] Length = 553 Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 205/578 (35%), Positives = 313/578 (54%), Gaps = 43/578 (7%) Query: 15 LKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72 ++EI+ IK + D I IE P+D +G S+N AM+L++ +P IA+ IV + Sbjct: 12 IEEIEASIKKARLAEDIPEIKIEIPKDTKNGDYSSNIAMVLTKIAKRNPREIAQAIVDHL 71 Query: 73 KID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131 V V IAG GFIN YL YL +++ + G ++G K + +E+VSAN Sbjct: 72 DTSKAHVKEVDIAGPGFINFYLDNHYLTEVIPEAIHKGDKFGYADEPKNKNILLEYVSAN 131 Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 PTG +H+GH R A VGD+LA+++ +GY VTREYYINDAG QI LA S+ RY +AL + Sbjct: 132 PTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLARSIETRYFEALGD 191 Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251 ++PE Y G + +GK+LADK+ E+ ++ +E+ L + V M ++ DL A Sbjct: 192 TSHEMPEDGYNGKDIIEIGKDLADKHP-EIKDYSDEERLKTFRQLGVDYEMDKLKKDLAA 250 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 N+ D + SE + I + + + GY YE Sbjct: 251 FNVHFDNWFSETSLYEN--GAIDNTLAKMKELGYTYEA----------------DGATWL 292 Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371 R++ DD DR L+K DG+YTYF D AY K RG D +I +MG+DH GY+ RL+A Sbjct: 293 RTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGADHHGYINRLKASL 352 Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431 ++ + + ++VRL ++G +KMSKR G+ ITLR ++DEVG D+ R+ + R Sbjct: 353 ETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGIDAARYFLTMRSP 412 Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQ 487 DFD KEQS++NP++Y QYA+AR SI +QAK +I D DF I Sbjct: 413 DSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEQGVEITTDADF-----TTITN 467 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 E ++L+ +AE+ IE+A + P++L Y+ DLAS FH ++ + Sbjct: 468 E-----KAIELLKKVAEFETTIESAAEHRAPHRLTNYIQDLASAFHKFYNAEK------- 515 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V ++ + T + ++ AV +++ L ++GV +P M Sbjct: 516 VLTDDAEKTKAHVAMIEAVRITLHNALTLVGVTAPESM 553 >gi|323465238|gb|ADX77391.1| arginyl-tRNA synthetase [Staphylococcus pseudintermedius ED99] Length = 552 Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 200/559 (35%), Positives = 306/559 (54%), Gaps = 42/559 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFIN 90 I IE P+D +G +TN AM+L++ P IA+LIV + + V + IAG GFIN Sbjct: 31 IKIEIPKDTKNGDYATNIAMVLTKLAKRTPREIAQLIVDHLDTEAAHVKKIDIAGPGFIN 90 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL SYL ++ + ++GR K K+ +E+VSANPTG +H+GH R A VGDTL Sbjct: 91 FYLDSSYLNAVIDQALELDTQFGRVAESKNKKILVEYVSANPTGDLHIGHARNAAVGDTL 150 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +++ +GY+VTREYYINDAG QI LA S+ RY Q L +++P Y G +K++G Sbjct: 151 CNILDAAGYDVTREYYINDAGNQITNLAKSIEARYLQHL-GQKAEMPADGYHGQDIKNIG 209 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 +LA K L++ +++ L + V M ++ DL NI D + SE + + Sbjct: 210 ADLAKK-QPNLMDLSDDERLKTFRQLGVDYEMAKLKQDLADFNIHFDNWFSETSLY--EK 266 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I+ +++ + GY YE D L R+T DD DR L+K DG+ Sbjct: 267 GEIKAVLERMKENGYTYE---------------QDGATWL-RTTDFKDDKDRVLIKKDGT 310 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTYF D+AY K++RG DN+I + G+DH GY+ RL+A ++ + + ++VR Sbjct: 311 YTYFLPDIAYHYDKFQRGNDNLINLFGADHHGYINRLKASLETFGVDSDRLEIQIMQMVR 370 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L +DG +KMSKR G+ ITLR ++DEVG D+ R+ + R DFD KEQS++NP Sbjct: 371 LMQDGEEVKMSKRTGNAITLREIMDEVGIDAARYFLTMRSADTHFDFDMALAKEQSQDNP 430 Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 V+Y QYA+AR SI RQA+ + D+ + ++L+ +AE+ Sbjct: 431 VYYAQYAHARICSILRQAEAQGYQVEKGADYQTITND----------KAIELLKKVAEFE 480 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 +IE A A+ P+++ Y+ DLA+ FH ++ + V ++ T L L+ AV Sbjct: 481 PMIEGAAEARAPHRVTNYIQDLAAHFHKFYNAEK-------VLTEDQAKTKAHLALIDAV 533 Query: 567 ASIINSGLNIIGVESPNEM 585 + + L ++GV +P +M Sbjct: 534 RITLRNALQLVGVTAPEQM 552 >gi|304437110|ref|ZP_07397073.1| arginine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370061|gb|EFM23723.1| arginine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 552 Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 204/561 (36%), Positives = 293/561 (52%), Gaps = 34/561 (6%) Query: 25 EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84 E L I++E P D A G +TN AM +R P IAE + A + +D +A Sbjct: 26 EGGALPPILLEEPPDKALGDFATNFAMQSARVFRQPPKKIAETLRAHL-TGAWLDHAEMA 84 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 G GF+N YL + L I+ +G YG + +E+VSANPTGP+HVGH R A Sbjct: 85 GPGFLNFYLKKDVMADTLRGILRAGETYGTLAPKDAAPIQVEYVSANPTGPLHVGHGRGA 144 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204 VG L +L+ +GY V EYY+NDAG Q++ LA+SV RY + L + PE Y G Sbjct: 145 AVGSALVTLLRTAGYTVESEYYVNDAGNQMHLLAVSVNARYLE-LLGREVLFPENGYHGA 203 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 + + + D+ L EE+ L KD + + + +R+DL + D + SE Sbjct: 204 DIVETAQRIIDRDGERYLALSEEERLEQFKDIAYREKLAALREDLADFGVTFDAWFSERT 263 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 H P+ +R ++D L +G YE + RST GDD DR + Sbjct: 264 LH---PAAVRRVVDVLLERGTAYE----------------KDGAVWLRSTDYGDDKDRVI 304 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 + +G TY AAD+AY KY RGF ++ + G+DH GYV R++A AA+ Q+ VL Sbjct: 305 FRDNGVPTYLAADIAYHDNKYARGFGRLVNIWGADHHGYVARVKAAMAALGHDPQQLTVL 364 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L ++V LYRDG +K+SKR G+ +TLR +++EVG D+ R+ L R LDFD K+ Sbjct: 365 LLQMVSLYRDGEVVKLSKRTGETVTLRELMEEVGVDAARYFFLMRSLDSQLDFDLDLAKK 424 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 ++ ENPV+Y+QYA+AR SIFRQA+ + + P + E D +E LI LA Sbjct: 425 RTNENPVYYIQYAHARISSIFRQAE------ESKIVPLDGAELERLTDETETALIKKLAA 478 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 YP IE A P ++A Y ++LA+ FH ++ R + L RL LV Sbjct: 479 YPEEIERAAAEYAPQRIARYSHELAAAFHAFYNKCR-------IVGQEPALASARLALVM 531 Query: 565 AVASIINSGLNIIGVESPNEM 585 A +I L I+GV +P +M Sbjct: 532 ATGRVIRHSLGILGVSAPEKM 552 >gi|289579360|ref|YP_003477987.1| arginyl-tRNA synthetase [Thermoanaerobacter italicus Ab9] gi|289529073|gb|ADD03425.1| arginyl-tRNA synthetase [Thermoanaerobacter italicus Ab9] Length = 561 Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 198/546 (36%), Positives = 313/546 (57%), Gaps = 33/546 (6%) Query: 42 HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRK 100 HG L+ N AMI+++ + P IAE+IV+++ ++ + +AG GFIN +L+ +L + Sbjct: 47 HGDLAINTAMIMAKQAKMSPKKIAEIIVSKMDTSNTFIEKIEVAGPGFINFFLNDKFLEE 106 Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 L + G +YGR IGKG KV +EFVSANPTGPMH+G+ R +GD LAS++ ++GY+ Sbjct: 107 TLKLVYKRGKDYGRVNIGKGKKVQVEFVSANPTGPMHMGNARGGALGDALASVLDYAGYD 166 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 VTRE+YINDAG QI S+ RY Q L +++PEG Y G + +E + Y + Sbjct: 167 VTREFYINDAGNQIEKFGYSLEARYLQ-LLGIPAEVPEGGYHGEDIIDRAREFLEIYGDK 225 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280 + P E+ + +Y ++ ++ I++DL+ I++D++ SE + D + +I+ L Sbjct: 226 YKDAPSEERRKTLVEYGLKKNLEKIKEDLELYGIEYDVWFSEQSLY--DSGEVYKVIEEL 283 Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340 ++GY YE L F+ T+ G + D L++++G TY A+D+AY Sbjct: 284 KQKGYTYE----------------KDGALWFKMTLFGAEKDDVLVRANGFPTYLASDIAY 327 Query: 341 FKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399 K K+ RGFD +I V G+DH G++ ++ A+ +++V+L +LV+L G +K Sbjct: 328 HKNKFITRGFDWVINVWGADHHGHIAPMKGAMQALGIDPDRLDVVLMQLVKLIEGGQVVK 387 Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459 MSKR G +TLR ++DEVG D+ RF R +DFD KEQS ENPVFYVQYA+A Sbjct: 388 MSKRTGRMVTLRDLIDEVGKDAARFFFNMRSADSPIDFDLDLAKEQSNENPVFYVQYAHA 447 Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 R SI RQ ++ + D +++ +E E D LI LA +P I A P+ Sbjct: 448 RICSIIRQLEEKVKIENIDEVDLSLLKEEEEKD-----LIKKLAYFPEEITIAARTLTPH 502 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 ++ Y+ D+AS+FH ++ + R++ V+ N L R L+ AV ++I + L+I+ V Sbjct: 503 RITRYILDVASLFHSFYN----SHRVKGVEEN---LMKARFVLILAVKTVIKNALDILKV 555 Query: 580 ESPNEM 585 +P M Sbjct: 556 TAPERM 561 >gi|167629021|ref|YP_001679520.1| arginyl-tRNA synthetase [Heliobacterium modesticaldum Ice1] gi|238687992|sp|B0TI89|SYR_HELMI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|167591761|gb|ABZ83509.1| arginyl-tRNA synthetase [Heliobacterium modesticaldum Ice1] Length = 563 Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 199/563 (35%), Positives = 309/563 (54%), Gaps = 46/563 (8%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +E PR+ HG +TN AM+++R ++P +AE IVARI + V +AG GFIN Sbjct: 37 ALEVPREKQHGDFATNVAMLMAREARMNPRQLAEKIVARIDRGDWLKDVQVAGPGFINFT 96 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L ++L +L ++ + YG + +G G +V +EFVSANPTG +H+G+ R A +GDTLA+ Sbjct: 97 LHHAWLYPVLPAVQQADEAYGASKVGAGRRVQVEFVSANPTGLLHMGNARGAALGDTLAN 156 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 L+ +G++V +E+YINDAG QI A S+ RY Q L D PE Y G + + Sbjct: 157 LLRLAGFDVQKEFYINDAGNQIENFAKSLEARYLQ-LLGRDVPFPEEGYHGEDIVETMRG 215 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 L K + L ++ Y+++ + IR L+ + +D++ SE H D Sbjct: 216 LIAKEGDKYLALESSLRREMLVKYALREKLDAIRRTLERFGVVYDVWFSEQSLH--DSGA 273 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 I+ ++ L GY+YE + L F++T +G++ D L++S+G T Sbjct: 274 IQQTLERLRANGYIYE----------------NEGALWFKATALGEEKDEVLVRSNGIPT 317 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 YFAAD+AY K K++RGFD +I + G+DH G+V R++ AV +++V+L +LVRLY Sbjct: 318 YFAADIAYHKNKFDRGFDWVINIWGADHHGHVSRMKNAVKAVGYDPKKLDVILMQLVRLY 377 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 + G ++MSKR G +ITL +++EVG D+ RF + R LDFD K QS ENPVF Sbjct: 378 KGGEIVRMSKRTGQYITLDELIEEVGKDAARFFFVMRGADAHLDFDLDLAKRQSSENPVF 437 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT----------SELQLIVHL 502 YVQYA+AR SI R A++ +PQ + + +EL LI + Sbjct: 438 YVQYAHARICSILRTAQE----------AGYAVPQGQQVEAGLDLTVLDHPAELALIRKI 487 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 A+ P + A EP+++A Y DLA++FH ++H R V + ++L RL L Sbjct: 488 ADLPDEVARAATQMEPHRMARYAQDLAALFHSFYTHCR-------VLTDEKELRDARLLL 540 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 V ++ + L+ +G+ +P M Sbjct: 541 VDDSRIVLRNVLHCMGLTAPERM 563 >gi|224475751|ref|YP_002633357.1| arginyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus TM300] gi|254782982|sp|B9DKQ7|SYR_STACT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|222420358|emb|CAL27172.1| putative arginyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus TM300] Length = 554 Score = 344 bits (882), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 203/560 (36%), Positives = 313/560 (55%), Gaps = 40/560 (7%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFI 89 + +E P+D +G STN AM+L++ +P IA+ IV + K +V+ + IAG GFI Sbjct: 30 EVKVEIPKDPKNGDYSTNIAMVLTKIAKRNPHEIAQAIVDHLDKSKANVEKIEIAGPGFI 89 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N YL+ YL ++ + ++GRN K KV +E+VSANPTG +H+GH R A VGDT Sbjct: 90 NFYLNNQYLTAVIPEALEKDKDFGRNEDPKHQKVLVEYVSANPTGDLHIGHARNAAVGDT 149 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 L++++ +GY+VTREYYINDAG QI LA S+ RY QA+ +++LP Y G + ++ Sbjct: 150 LSNILDAAGYDVTREYYINDAGNQITNLAHSIEARYDQAM-GKETELPADGYYGKDIINI 208 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 GK+LA+K EL + PE++ L + + V M+ ++ DL N D + SE + D Sbjct: 209 GKDLAEK-RPELKDLPEDERLKVFRQLGVDYEMEKLKKDLADFNTHFDGWFSETTLY--D 265 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 I+ +++ + GY YE R+T DD DR ++K DG Sbjct: 266 KGEIKKVLELMKENGYTYEA----------------DGATWLRTTDFNDDKDRVIIKKDG 309 Query: 330 SYTYFAADLAYFKCKYER--GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387 SYTYF D+AY K+ R G D +I + G+DH GY+ RL+A ++ + + + Sbjct: 310 SYTYFLPDVAYHYDKFHRDGGQDILINLFGADHHGYINRLKASVETYGIDADRLEIQIMQ 369 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 +VRL +DG +KMSKR G+ ITLR ++DEVG D+ R+ + R DFD KE S Sbjct: 370 MVRLMQDGEEVKMSKRTGNAITLREIMDEVGIDAARYFLTMRSPDTHFDFDMELAKENSA 429 Query: 448 ENPVFYVQYAYARCRSIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 ENPV+Y QYA+AR SI +QA + I P + D +VI + D L+ +AE+ Sbjct: 430 ENPVYYAQYAHARISSILKQAGERGITPSENADF---SVITNDKAID-----LLKKVAEF 481 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 +IE+A + P+++ Y+ +LAS FH ++ + V ++ K T + ++ A Sbjct: 482 EPMIESAAEHRAPHRVTNYIQELASAFHKFYNADK-------VLTDDEKKTQAYVSMIAA 534 Query: 566 VASIINSGLNIIGVESPNEM 585 V + + L ++GV +P+ M Sbjct: 535 VQITLRNALALVGVSAPHNM 554 >gi|228475105|ref|ZP_04059832.1| arginine--tRNA ligase [Staphylococcus hominis SK119] gi|314937074|ref|ZP_07844421.1| arginine--tRNA ligase [Staphylococcus hominis subsp. hominis C80] gi|228270869|gb|EEK12266.1| arginine--tRNA ligase [Staphylococcus hominis SK119] gi|313655693|gb|EFS19438.1| arginine--tRNA ligase [Staphylococcus hominis subsp. hominis C80] Length = 553 Score = 344 bits (882), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 205/581 (35%), Positives = 316/581 (54%), Gaps = 43/581 (7%) Query: 12 KNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69 K ++EI+ IK D I +E P+D +G STN AM+L++ +P IA+ IV Sbjct: 9 KTLIQEIEASIKKANLAEDIPEIKVEIPKDTKNGDYSTNIAMVLTKIAKRNPRDIAQAIV 68 Query: 70 ARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128 + +V V IAG GFIN YL YL ++S + G ++G K K+ +E+V Sbjct: 69 DNLDTSKANVKQVDIAGPGFINFYLDNQYLTAVISEAIQKGDKFGYAEEPKNKKILLEYV 128 Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188 SANPTG +H+GH R A VGD+LA+++ +GY+VTREYYINDAG QI LA S+ R+ +A Sbjct: 129 SANPTGDLHIGHARNAAVGDSLANILIAAGYDVTREYYINDAGNQITNLARSIETRFFEA 188 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248 L + ++P Y G + +GK+LA K+ E+ ++ +E+ L + V M ++ D Sbjct: 189 LGDTSHEMPADGYNGKDIVEIGKDLAKKHP-EMKDYSDEERLKTFRQLGVDYEMDKLKKD 247 Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308 L N+ D + SE + I + ++ + GY YE Sbjct: 248 LSDFNVHFDNWFSETSLYEN--GAIDNTLEKMHELGYTYEA----------------DGA 289 Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368 R++ DD DR L+K DG+YTYF D AY K RG D +I +MG+DH GY+ RL+ Sbjct: 290 TWLRTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGADHHGYINRLK 349 Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428 A ++ + + ++VRL ++G +KMSKR G+ ITLR ++DEVG D+ R+ + Sbjct: 350 ASLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGIDAARYFLTM 409 Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNV 484 R DFD KEQS++NP++Y QYA+AR SI +QAK +I + DF + Sbjct: 410 RSPDSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEKGIEIDKNADF-----ST 464 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 I E D L+ +AE+ IE+A ++ P++L Y+ DLAS FH ++ + Sbjct: 465 ITNEKAID-----LLKKVAEFEPTIESAAESRAPHRLTNYIQDLASAFHKFYNAEK---- 515 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V +++ + T + L+ AV +++ L ++GV +P M Sbjct: 516 ---VLSDDIEKTKAHVALIEAVKITLHNALALVGVSAPESM 553 >gi|297545501|ref|YP_003677803.1| arginyl-tRNA synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296843276|gb|ADH61792.1| arginyl-tRNA synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 561 Score = 343 bits (881), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 197/546 (36%), Positives = 313/546 (57%), Gaps = 33/546 (6%) Query: 42 HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRK 100 HG L+ N AMI+++ + P IAE+IV+++ ++ + +AG GFIN +L+ +L + Sbjct: 47 HGDLAINTAMIMAKQAKMSPKKIAEIIVSKMDTSNTFIEKIEVAGPGFINFFLNDKFLEE 106 Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 L + G +YGR IGKG KV +EFVSANPTGPMH+G+ R +GD LAS++ ++GY+ Sbjct: 107 TLKLVYKRGKDYGRVNIGKGKKVQVEFVSANPTGPMHMGNARGGALGDALASVLDYAGYD 166 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 VTRE+YINDAG QI S+ RY Q L +++PEG Y G + +E + Y + Sbjct: 167 VTREFYINDAGNQIEKFGYSLEARYLQ-LLGIPAEVPEGGYHGEDIIDRAREFLEIYGDK 225 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280 + P E+ + +Y ++ ++ I++DL+ I++D++ SE + D + +I+ L Sbjct: 226 YKDAPSEERRKALVEYGLKKNLEKIKEDLELYGIEYDVWFSEQSLY--DSGEVYKVIEEL 283 Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340 ++GY YE L F+ T+ G + D L++++G TY A+D+AY Sbjct: 284 KQKGYTYE----------------KDGALWFKMTLFGAEKDDVLVRANGFPTYLASDIAY 327 Query: 341 FKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399 K K+ RGFD +I V G+DH G++ ++ A+ +++V+L +LV+L G +K Sbjct: 328 HKNKFITRGFDWVINVWGADHHGHIAPMKGAMQALGIDPDRLDVVLMQLVKLIEGGQVVK 387 Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459 MSKR G +TLR ++DEVG D+ RF R +DFD KEQS ENPVFYVQYA+A Sbjct: 388 MSKRTGRMVTLRDLIDEVGKDAARFFFNMRSADSPIDFDLDLAKEQSNENPVFYVQYAHA 447 Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 R SI RQ ++ + D +++ +E E D LI LA +P I A P+ Sbjct: 448 RICSIIRQLEEKVKIENIDEVDLSLLKEEEEKD-----LIKKLAYFPEEITIAARTLTPH 502 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 ++ Y+ D+AS+FH ++ + R++ V+ N L R L+ AV ++I + L+I+ + Sbjct: 503 RITRYVLDVASLFHSFYN----SHRVKGVEEN---LMKARFVLILAVKTVIKNALDILKI 555 Query: 580 ESPNEM 585 +P M Sbjct: 556 TAPERM 561 >gi|20808887|ref|NP_624058.1| arginyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4] gi|23822189|sp|Q8R786|SYR_THETN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|20517545|gb|AAM25662.1| Arginyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4] Length = 562 Score = 343 bits (881), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 198/560 (35%), Positives = 316/560 (56%), Gaps = 40/560 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90 + +E P++ HG L+TN AM+++R + P IAE+I +++ ++ V +AG GFIN Sbjct: 37 VEVEEPKEKQHGDLATNFAMVMAREAKMAPRKIAEIIASKMNTSGTFIEKVEVAGPGFIN 96 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +L+ ++L + L I G +YGR +GKG KV +EFVSANPTGPMH+G+ R +GD L Sbjct: 97 FFLNQNFLIETLKLIHKRGKDYGRVNLGKGKKVQVEFVSANPTGPMHMGNARGGAIGDVL 156 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 AS++ ++GY V+RE+YINDAG QI S+ RY Q L D+++PEG Y G + Sbjct: 157 ASILDYAGYNVSREFYINDAGNQIEKFGYSLEARYLQ-LLGIDAEVPEGGYHGEDIIDRA 215 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 KE + + + + P E+ + +Y ++ ++ +++DL I++D++ SE + D Sbjct: 216 KEFLEIHGDKYKDVPSEERRKALIEYGLKKNIEKMKEDLVLYGIEYDVWFSEQSLY--DS 273 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + +I+ L +GY YE L F+ T+ G + D L++S+G Sbjct: 274 GEVYKVIEELTEKGYTYE----------------KDGALWFKMTLFGAEKDDVLVRSNGV 317 Query: 331 YTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 TY A+D+AY K K+ RGFD +I V G+DH G+V ++ A+ +++V+L +LV Sbjct: 318 PTYLASDIAYHKNKFVTRGFDWVINVWGADHHGHVAPMKGAMKALGIDPNRLDVVLMQLV 377 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 +L G ++MSKR G ITLR +++EVG D+ RF R ++FD K+Q+ EN Sbjct: 378 KLIEGGQVVRMSKRTGKMITLRDLIEEVGKDAARFFFNMRSPDSPIEFDLDLAKQQTNEN 437 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDL----DFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 PVFYVQYA+AR SI RQ +++ + D DL ++ +E E D LI LA + Sbjct: 438 PVFYVQYAHARICSIIRQLEEMGVKIENIEDVDL---GLLKEEEEVD-----LIKKLAYF 489 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 P I A P+++ Y+ D+AS+FH ++ R V+ L R L+ A Sbjct: 490 PEEITIAAKTLAPHRITRYVIDVASLFHSFYNSHR-------VKGAEENLMKARFALILA 542 Query: 566 VASIINSGLNIIGVESPNEM 585 V +++ + L+I+ V +P M Sbjct: 543 VKTVLKNALDILKVTAPERM 562 >gi|92112735|ref|YP_572663.1| arginyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043] gi|123265793|sp|Q1QZZ4|SYR_CHRSD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|91795825|gb|ABE57964.1| arginyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043] Length = 561 Score = 343 bits (881), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 206/567 (36%), Positives = 309/567 (54%), Gaps = 48/567 (8%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + +E +D AHG ++N A+ L++P G P +AE +VA + + V IAG GFIN Sbjct: 30 VKVEPTKDKAHGDYASNLALTLAKPAGRKPRDLAEALVAALPPSDAIRQVDIAGPGFINF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + +++ +I+ +G +GR+L G G KV +EFVSANPTGP+HVGH R A +GD L Sbjct: 90 FAATDAAAQVVPAILDAGDTFGRSLSGAGEKVQVEFVSANPTGPLHVGHGRGAAIGDCLC 149 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 L+ +G+EVTRE+Y NDAGAQI LALSV R Q L +D+ PE Y G Y+ V + Sbjct: 150 RLLEATGFEVTREFYYNDAGAQIQNLALSVQARV-QGLTPDDAAWPEDGYRGAYINDVAQ 208 Query: 212 E-------LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 +AD P++ L ++D++V + + DLKA + D++ E Sbjct: 209 AYLAGETVVADDRDVTASAAPDD--LDAIRDFAVAYLRREQDLDLKAFGVAFDVYFLESS 266 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 + D + + L G+ YE + R+T GDD DR + Sbjct: 267 LY--DDGKVDATVKALVEGGHTYE----------------EDGATWLRTTDFGDDKDRVM 308 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ--IN 382 K DG YTYF D+AY K++RGF +I G+DH V R+ A A+ Q + Sbjct: 309 RKKDGGYTYFLPDVAYHLDKWQRGFTTVINEQGADHHSTVTRVRAGLQALEAGIPQGWPD 368 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 +L ++V + R G+ +K+SKRAG ++TLR ++DEVG D+ RF + R++ L FD Sbjct: 369 YVLHQMVLVTRSGVEVKLSKRAGSYVTLRDLIDEVGRDATRFFLAARRSDSQLTFDIDLA 428 Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV----IPQESEFDTSELQL 498 + QS +NPV+Y+QYA+AR S+ R+A+D D DL +++ PQE E L Sbjct: 429 RSQSNDNPVYYIQYAHARVCSVMRRAQDAGKAFDRDLAMQHLGRLDAPQEKE-------L 481 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 + LA YP V+E A +EP ++A YL DLA+ FH ++ + V + +L Sbjct: 482 MNRLARYPEVVERAARMREPQQVAQYLMDLAADFHTCYNAVK-------VMVEDDELRNA 534 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 RL L A +I +GL+++GV +P EM Sbjct: 535 RLALGLATRQVIRNGLDLMGVSAPEEM 561 >gi|304315735|ref|YP_003850880.1| arginyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777237|gb|ADL67796.1| arginyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 562 Score = 343 bits (881), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 208/561 (37%), Positives = 320/561 (57%), Gaps = 42/561 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90 I IE P++ G LS N AM++++ + P IAE+I +K+ +D V IAG GF+N Sbjct: 37 IEIEEPKEKQFGDLSINTAMVMAKSAKMPPRKIAEIIKDGLKLKGTLIDKVEIAGPGFMN 96 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YLS Y + L I G +YGR IG G KV +EFVSANPTGPMH+G+ R +GD L Sbjct: 97 FYLSEDYKVEALKLIKRKGSDYGRVNIGNGKKVQVEFVSANPTGPMHMGNARGGALGDAL 156 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +S++ ++GY+VTRE+YINDAG QI LS+ RY + L +++PEG Y G + Sbjct: 157 SSILDYAGYDVTREFYINDAGNQIEKFGLSLEARYLE-LLGEHAEVPEGGYHGDDIIERA 215 Query: 211 KELADKYSSELLN-FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 KE + Y + + PE++ +V+ Y ++ ++ +++DL+A I++D++ SE+ H + Sbjct: 216 KEFLELYGDKYKDAAPEDRRKALVQ-YGLKKNIEKLKEDLEAYGIEYDVWFSENTLH--E 272 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + +ID L +GY YE L F+ T+ G + D L++++G Sbjct: 273 SGEVESVIDELKEKGYTYE----------------KDGALWFKETLFGAEKDDVLVRANG 316 Query: 330 SYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 TY A+D+AY K K+ +RGFD +I + G+DH G+V ++ A+ +++VLL +L Sbjct: 317 YPTYLASDIAYHKNKFVKRGFDWVIDIWGADHHGHVAPMKGAMKALGIDPDKLDVLLMQL 376 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 VRL + +KMSKR G +TLR ++DEVG D+ RF R +DFD EQS E Sbjct: 377 VRLMKGKEVVKMSKRTGKMVTLRDLIDEVGKDAARFFFNMRSADSAVDFDMDLAVEQSNE 436 Query: 449 NPVFYVQYAYARCRSIFRQAKD--IFPD--LDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 NPVFYVQYA+AR SI RQ KD I D D DL N++ +E+E D LI LA Sbjct: 437 NPVFYVQYAHARICSIIRQLKDDGINTDDLKDVDL---NLLNEEAEID-----LIKKLAY 488 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 P + A P+++ Y+ D+AS+FH ++ R V+ + +L R+ L+ Sbjct: 489 LPEEVTIAAKTMAPHRITRYILDVASLFHTFYNSCR-------VRGVDEELMKARIVLID 541 Query: 565 AVASIINSGLNIIGVESPNEM 585 + +I + L+++ + +P +M Sbjct: 542 STRIVIKNVLDMLKITAPEKM 562 >gi|315604827|ref|ZP_07879886.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310] gi|315313498|gb|EFU61556.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310] Length = 559 Score = 343 bits (880), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 199/572 (34%), Positives = 316/572 (55%), Gaps = 41/572 (7%) Query: 21 KIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD 79 +I ++ ++ D + +ERPR HG +TN AM L + G+ P A+++ + D+D Sbjct: 22 RISIDPALVPDPVTVERPRIREHGDWATNVAMQLGKKAGMAPRDFAQILAEDLSGAEDID 81 Query: 80 SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139 SV +AG GFIN+ L ++ +IV +G YGRN G +N+E+VSANPTGP+H+G Sbjct: 82 SVEVAGPGFINIRLGAGAAGELARTIVEAGAAYGRNETLAGRSINLEYVSANPTGPVHLG 141 Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199 R A VGD+LA LMA SG VTREYY ND G+QI+ + S++ R ++PE Sbjct: 142 SVRWAAVGDSLARLMAASGAAVTREYYFNDHGSQIDHFSHSLYARAM------GREVPED 195 Query: 200 YYPGVYLKHVGKEL-ADKYSS---ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255 Y G Y+ + +++ AD ++ + + PEE+ + + + V+ M I++ L + + Sbjct: 196 GYGGQYIADIAEQVRADARAAGEPDPITLPEEEAIEVFRARGVELMFAEIKERLHSFRVD 255 Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315 D+F ED H + D I L +G +++ + + R+T Sbjct: 256 FDVFFHEDSLH--SSGAVADAIARLRERGEIFD----------------EGGAVWLRTTT 297 Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375 GDD DR L+KSDG YFA D+AY+ K ERG D IY++G+DH GY+ R+ A+ AA Sbjct: 298 YGDDKDRVLIKSDGQAAYFAGDVAYYLNKRERGADAAIYLLGADHHGYIGRMMAMCAAFG 357 Query: 376 EKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434 +K + +L+ +LV L +DG P++MSKRAG +TL +VD VG D+ R+ ++ Sbjct: 358 DKPGVNLQILIGQLVNLVKDGEPVRMSKRAGTIVTLDDLVDAVGVDAARYALVRVSMDTQ 417 Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494 +D D + + S +NPV+YVQYA+ R ++ R A D P + ++E D++ Sbjct: 418 VDIDLDLLSQHSNDNPVYYVQYAHVRTCNVARNAAAHGVSRDAGFDPAAL---DTEADSA 474 Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF-VQANNR 553 L+ LA++P + AT +EP+++A YL LA+ +H + R PR V+A + Sbjct: 475 ---LLGALAQFPAQVAQATELREPHRIARYLESLAATYHAWYGQCRVTPRSDDPVEAGH- 530 Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL L AV ++ +GL ++GV +P M Sbjct: 531 ---VARLWLNDAVTQVLRTGLGLLGVSAPERM 559 >gi|70727292|ref|YP_254208.1| arginyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435] gi|109895040|sp|Q4L425|SYR_STAHJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|68448018|dbj|BAE05602.1| arginyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435] Length = 553 Score = 343 bits (880), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 200/560 (35%), Positives = 304/560 (54%), Gaps = 41/560 (7%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFI 89 I +E P+D +G STN AM+L++ +P IA+ IV + +V V IAG GFI Sbjct: 30 EIKVEIPKDTKNGDYSTNIAMVLTKVAKRNPREIAQAIVDNLDTSKANVKQVDIAGPGFI 89 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N YL YL ++ + G ++G K T + +E+VSANPTG +H+GH R A VGD+ Sbjct: 90 NFYLDNQYLTAVIPEAINKGDKFGCAEESKNTNILLEYVSANPTGDLHIGHARNAAVGDS 149 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 LA+++ +GY VTREYYINDAG QI LA S+ R+ +AL + ++P Y G + + Sbjct: 150 LANILIAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDTSHEMPADGYNGKDIIEI 209 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 GK+LADK+ E+ ++ +E+ L + V M ++ DL N+ D + SE + Sbjct: 210 GKDLADKHP-EMKDYSDEERLKTFRQLGVDYEMDKLKKDLADFNVHFDNWFSETSLYEN- 267 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 I + + + GY YE R++ DD DR L+K DG Sbjct: 268 -GAIDNTLAKMNELGYTYEA----------------DGATWLRTSDFKDDKDRVLIKKDG 310 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 +YTYF D AY K RG D +I +MG+DH GY+ RL+A ++ + + ++V Sbjct: 311 TYTYFTPDTAYHYNKINRGNDILIDLMGADHHGYINRLKASLETFGVDSNRLEIQIMQMV 370 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 RL +DG+ +KMSKR G+ ITLR ++DEVG D+ R+ + R DFD KE+S++N Sbjct: 371 RLMQDGVEVKMSKRTGNAITLREIMDEVGIDAARYFLTMRSPDSHFDFDLELAKEKSQDN 430 Query: 450 PVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 P++Y QYA+AR SI +QAK ++ D DF + I E D L+ +AE+ Sbjct: 431 PIYYAQYAHARICSILKQAKEQGVEVTADADF-----STITNEKAID-----LLKKVAEF 480 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 IE+A + P++L Y+ DLAS FH ++ + V ++ + T + LV A Sbjct: 481 EPTIESAAENRAPHRLTNYIQDLASAFHKFYNAEK-------VLTDDAEKTKAHIALVDA 533 Query: 566 VASIINSGLNIIGVESPNEM 585 V +++ L ++GV +P M Sbjct: 534 VRITLHNALALVGVSAPESM 553 >gi|223042942|ref|ZP_03612990.1| arginyl-tRNA synthetase [Staphylococcus capitis SK14] gi|222443796|gb|EEE49893.1| arginyl-tRNA synthetase [Staphylococcus capitis SK14] Length = 553 Score = 343 bits (880), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 205/578 (35%), Positives = 312/578 (53%), Gaps = 43/578 (7%) Query: 15 LKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72 ++EI+ IK D I IE P+D +G S+N AM+L++ +P IA+ IV + Sbjct: 12 IEEIEASIKKAGLAEDIPEIKIEIPKDTKNGDYSSNIAMVLTKIAKRNPREIAQAIVDNL 71 Query: 73 KID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131 V + IAG GFIN YL YL +I+ + G ++G K T + +E+VSAN Sbjct: 72 DTSKAHVKEIDIAGPGFINFYLDNQYLTQIIPEAINKGDQFGYADQSKNTNILLEYVSAN 131 Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 PTG +H+GH R A VGD+LA+++ +GY VTREYYINDAG QI LA S+ RY +AL + Sbjct: 132 PTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLARSIETRYFEALGD 191 Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251 ++PE Y G + +GK+LA+K+ E+ ++ +E+ L + V M ++ DL Sbjct: 192 TSHEMPEDGYNGKDIIEIGKDLANKHP-EIKDYSDEERLKTFRQLGVDYEMDKLKRDLAD 250 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 N+ D + SE + I + + + GY YE Sbjct: 251 FNVHFDNWFSETSLYEN--GAIDNTLAKMKELGYTYEA----------------DGATWL 292 Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371 R++ DD DR L+K DG+YTYF D AY K RG D +I +MG+DH GY+ RL+A Sbjct: 293 RTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGADHHGYINRLKASL 352 Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431 ++ + + ++VRL ++G +KMSKR G+ ITLR ++DEVG D+ R+ + R Sbjct: 353 ETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGIDAARYFLTMRSP 412 Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQ 487 DFD KEQS++NP++Y QYA+AR SI RQAK DI + +FD I Sbjct: 413 DSHFDFDLELAKEQSQDNPIYYAQYAHARICSILRQAKEQGVDITTNANFD-----TITN 467 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 E D L+ +AE+ IE+A + P++L Y+ DLA+ FH ++ + Sbjct: 468 EKAID-----LLKKVAEFETTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAEK------- 515 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V ++ + T + ++ AV +++ L ++GV +P M Sbjct: 516 VLTDDIEKTKALVAMIEAVRITLHNALTLVGVTAPESM 553 >gi|314932835|ref|ZP_07840204.1| arginine--tRNA ligase [Staphylococcus caprae C87] gi|313654516|gb|EFS18269.1| arginine--tRNA ligase [Staphylococcus caprae C87] Length = 553 Score = 343 bits (879), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 205/578 (35%), Positives = 312/578 (53%), Gaps = 43/578 (7%) Query: 15 LKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72 ++EI+ IK D I IE P+D +G S+N AM+L++ +P IA+ IV + Sbjct: 12 IEEIEASIKKAGLAEDIPEIKIEIPKDTKNGDYSSNIAMVLTKIAKRNPREIAQAIVDNL 71 Query: 73 KID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131 V + IAG GFIN YL YL +I+ + G ++G K T + +E+VSAN Sbjct: 72 DTSKAHVKEIDIAGPGFINFYLDNQYLTQIIPEAINKGDQFGYADQSKNTNILLEYVSAN 131 Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 PTG +H+GH R A VGD+LA+++ +GY VTREYYINDAG QI LA S+ RY +AL + Sbjct: 132 PTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLARSIETRYFEALGD 191 Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251 ++PE Y G + +GK+LA+K+ E+ ++ +E+ L + V M ++ DL Sbjct: 192 TSHEMPEDGYNGKDIIEIGKDLANKHP-EIKDYSDEERLKTFRQLGVDYEMDKLKRDLAD 250 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 N+ D + SE + I + + + GY YE Sbjct: 251 FNVHFDNWFSETSLYEN--GAIDNTLAKMKELGYTYEA----------------DGATWL 292 Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371 R++ DD DR L+K DG+YTYF D AY K RG D +I +MG+DH GY+ RL+A Sbjct: 293 RTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGDDILIDLMGADHHGYINRLKASL 352 Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431 ++ + + ++VRL ++G +KMSKR G+ ITLR ++DEVG D+ R+ + R Sbjct: 353 ETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGIDAARYFLTMRSP 412 Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQ 487 DFD KEQS++NP++Y QYA+AR SI RQAK DI + +FD I Sbjct: 413 DSHFDFDLELAKEQSQDNPIYYAQYAHARICSILRQAKEQGVDITTNANFD-----TITN 467 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 E D L+ +AE+ IE+A + P++L Y+ DLA+ FH ++ + Sbjct: 468 EKAID-----LLKKVAEFETTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAEK------- 515 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V ++ + T + ++ AV +++ L ++GV +P M Sbjct: 516 VLTDDIEKTKALVAMIEAVRITLHNALTLVGVTAPESM 553 >gi|292669448|ref|ZP_06602874.1| arginine-tRNA ligase [Selenomonas noxia ATCC 43541] gi|292648901|gb|EFF66873.1| arginine-tRNA ligase [Selenomonas noxia ATCC 43541] Length = 552 Score = 343 bits (879), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 202/561 (36%), Positives = 297/561 (52%), Gaps = 34/561 (6%) Query: 25 EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84 E L RI++E P + G +TN AM +R P IA I + D +D IA Sbjct: 26 ESGALPRILLEEPPEKELGDFATNFAMQSARVFRQPPQKIAAAIKEHLMGDW-LDHAEIA 84 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 G GF+NLYL + L L +++ +G EYG+ + + +E+VSANPTGP+HVGH R A Sbjct: 85 GPGFLNLYLKKTVLADTLRAVLAAGEEYGQLPAQEAGHIQVEYVSANPTGPLHVGHGRGA 144 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204 VG L L+ +GY V EYY+NDAG Q+N LA+SV RY + L + PE Y G Sbjct: 145 AVGSALVKLLRTAGYAVDSEYYVNDAGNQMNLLAVSVNARYLE-LLGKPAVFPENGYHGA 203 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 + + + D+ + L EE+ L I +D + + + + +DL + D + SE Sbjct: 204 DIVDTAQRIIDRDGDKYLLLSEEERLQIFQDLAYREKLAALEEDLADFGVTFDRWFSERT 263 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 H P +R ++D L +G YE + RST GDD DR + Sbjct: 264 LH---PGAVRRVVDVLLERGSAYE----------------KDGAVWLRSTDYGDDKDRVI 304 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 + +G TY AAD+AY KY RG+ MI + G+DH GYV R++A AA+ + ++ VL Sbjct: 305 FRDNGVPTYLAADIAYHADKYARGYGRMINIWGADHHGYVARVKAAIAALGDDPERLTVL 364 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L ++V LYRDG +K+SKR G+ +TLR +++EVG D+ R+ L R LDFD K+ Sbjct: 365 LLQMVSLYRDGALVKLSKRTGETVTLRELMEEVGVDAARYFFLMRSLDSQLDFDLDLAKK 424 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 ++ ENPV+Y+QYA+AR SIFRQA + + ++ E D +E+ LI +A Sbjct: 425 RTNENPVYYIQYAHARISSIFRQADEA------GIAAKDGAELELLTDETEIALIKKIAA 478 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 YP I A P ++A Y ++LA FH ++ R + L RL LV Sbjct: 479 YPEEIARAAAELAPQRIARYSHELAGAFHSFYNKCR-------IIGQEPALASARLALVS 531 Query: 565 AVASIINSGLNIIGVESPNEM 585 A +I + L ++GV +P +M Sbjct: 532 AAGRVIRNSLGVLGVSAPEKM 552 >gi|257062918|ref|YP_003142590.1| arginyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476] gi|256790571|gb|ACV21241.1| arginyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476] Length = 583 Score = 342 bits (878), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 198/569 (34%), Positives = 312/569 (54%), Gaps = 39/569 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90 + +ERPRD HG + A+ ++ +P +A+ IV + +PD V+ V IAG GFIN Sbjct: 32 VTLERPRDEGHGDWACTVALRCAKQAKKNPREVAQTIVDYMP-EPDFVEKVEIAGPGFIN 90 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDT 149 YL L+ ++ + +YG+ I +G + V IE++S+NPTGPMHVGH R A +G Sbjct: 91 FYLKHDALQNVVVKVREQKGDYGKGTIPEGMRRVQIEYISSNPTGPMHVGHGRWAALGSA 150 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 +A++M +GY+V E+YIND G Q++ +S+ RY Q L D+ +PEG Y G+Y+ + Sbjct: 151 MANVMRHAGYDVFEEFYINDHGVQMDKFGVSIVARYLQQLGQADAAVPEGGYNGLYVNDI 210 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR-------DDLKALNIQHDIFISE 262 K + D+ + +N E + + +++ +M IR + + + +++ Sbjct: 211 AKAIIDRDGDKWVNADEHERMVEFREFGYAYIMDNIRSTCERFGNHFERWQSERELYAPS 270 Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322 DDF SP+ I+D L QG +Y+ + + FRS+ GD+ DR Sbjct: 271 DDFWFDGRSPVEAILDKLREQGDIYD----------------EDGAVWFRSSAYGDEKDR 314 Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 L KSDG+YTYFA+D+AY K RGFD++I + G+DH GY+ R+ AV AA A + Sbjct: 315 VLQKSDGAYTYFASDVAYHYLKKMRGFDHLIDIWGADHHGYIARVAAVLAAEGFPGA-LE 373 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 V+L +LV L+RDG P++MSKR G+ IT ++DEVG D+ R+ ML R + + +DFD Sbjct: 374 VVLGQLVNLFRDGKPVRMSKRTGEMITFEELIDEVGIDATRYWMLDRSSDQPIDFDIEVA 433 Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPD--LDFDLFPRNVIPQESEFDT----SEL 496 K NPV+Y QYA+AR S+ R A + LD D IP + + EL Sbjct: 434 KRADDSNPVYYDQYAHARICSLLRNASGHAGEDNLDMDAVATECIPADVDLSVLSAPEEL 493 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 L+ ++E+ +I A + P++L Y Y+LAS+FH +++ ++A + L Sbjct: 494 ALMRKMSEFGDMIALAARDRAPFRLTHYAYELASLFHSFYAN------CPVLKAEDEGLK 547 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L A ++ LN++G+ +P M Sbjct: 548 QARLALADATRIVMAITLNLLGISAPQRM 576 >gi|311898368|dbj|BAJ30776.1| putative arginyl-tRNA synthetase [Kitasatospora setae KM-6054] Length = 551 Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 197/558 (35%), Positives = 309/558 (55%), Gaps = 37/558 (6%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 + + +ERP++ HG +TN A+ L++P G P +AE++ R++ V V IAG GF+ Sbjct: 29 EHVTVERPKNRDHGDYATNVALQLAKPAGRPPRAVAEILAGRLRGITGVAKVDIAGPGFL 88 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N+ L + ++ +IV +G YGRN KG ++N+EFVSANPTGP+H+G R A VGD+ Sbjct: 89 NITLDAATQGELARTIVEAGEAYGRNEALKGLRINLEFVSANPTGPIHIGGVRWAAVGDS 148 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 LA ++ +G EV+ EYY+NDAG QI A S+ N +PE Y G Y+ + Sbjct: 149 LARVLKATGAEVSTEYYLNDAGVQITKFAKSL------KASANGQPVPEDGYVGEYIADI 202 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 K + + +L+ PE++ L + + ++ M+ I+ + + D + SE H D Sbjct: 203 AKAVTEGVPG-VLDLPEDEQLQVFRTEGLKLMVAEIQRSMAEFGVHFDTWFSERTLH--D 259 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF-RSTMVGDDVDRPLLKSD 328 + I+ L QG+V+ DR+ ++ R+T GDD DR L+K+D Sbjct: 260 SGAVEKAIERLREQGHVF-----------------DREGAIWLRTTDFGDDKDRVLIKAD 302 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA-AVSEKKAQINVLLCE 387 G TYFAAD AY+ K +RG + +Y++G+DH GYV RL+A+AA A + I V++ + Sbjct: 303 GETTYFAADAAYYLSKRDRGAEVSVYMLGADHHGYVNRLKAIAACAGDDMDRNIEVMIGQ 362 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 V++ RDG +++SKRAG+ IT+ VVD +G D+ R+M++ + + D V Q+ Sbjct: 363 FVKMLRDGKEVRLSKRAGNIITIDDVVDWIGVDAARYMLVRQSTDSTITIDIDVVTSQTA 422 Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 ENPVFYVQYA+AR ++ R A + D P ++ E E D L+ L E+PR Sbjct: 423 ENPVFYVQYAHARMSAVQRNAVEKGITRSADFKP-ELLSSEWEND-----LLGQLGEFPR 476 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 V+ A +EP+ +A YL LA +H + + + P+ LT RL L A Sbjct: 477 VLAKAGELREPHHVATYLEKLARSYHRFYDNCQILPK---GDEEVTDLTHARLWLADATR 533 Query: 568 SIINSGLNIIGVESPNEM 585 + + +GL ++GV +P M Sbjct: 534 TTLANGLGLLGVSAPERM 551 >gi|288917938|ref|ZP_06412298.1| arginyl-tRNA synthetase [Frankia sp. EUN1f] gi|288350727|gb|EFC84944.1| arginyl-tRNA synthetase [Frankia sp. EUN1f] Length = 567 Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 204/571 (35%), Positives = 307/571 (53%), Gaps = 51/571 (8%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + IERPR HG ++ AM L++ P +AEL+ AR++ P V V +AG GF+N+ Sbjct: 31 VTIERPRQPEHGDYASPVAMQLAKAARRPPRQVAELLAARLRTSPGVAEVEVAGPGFLNI 90 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+ + L I ++V G YGR +G +VN+EFVSANPTGP+ + R A VGD LA Sbjct: 91 RLAGAALGGIAQAVVRGGAAYGRATTPRGLRVNLEFVSANPTGPVTLASTRWASVGDALA 150 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++A +GYEV EYY+NDAG Q+ S+ AL + PE Y G Y+ + Sbjct: 151 RVLAAAGYEVGTEYYVNDAGVQVERFGASIL----AALRGEPA--PENGYHGAYVAEIAA 204 Query: 212 EL--ADKYSSELL------NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 + A+ +L+ +EK L + V+ M+ IR L ++ D++ SE Sbjct: 205 RVVAANPGLEQLVAAGSGGQVADEKALAVCARDGVEMMLAEIRSTLAGFGVEFDLWKSER 264 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323 H + + I+ L +G+V+ D D + R+T GDD DR Sbjct: 265 SLH--EAGELTAAIEELRAKGHVF---------------DAD-GAVWLRTTDFGDDKDRA 306 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-IN 382 L+KSDG TYF AD AY++ K RGFD + Y++G+DH GY+ RL A+AA + Q ++ Sbjct: 307 LVKSDGHPTYFCADAAYYRDKRRRGFDRLCYLLGADHHGYIGRLRAIAACFGDDPEQTLD 366 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 V++ +LV L R G+ +KMSKRAG F+TL +VD VG D+ R+ ++ LD D + Sbjct: 367 VIIGQLVTLSRGGVAVKMSKRAGTFLTLHDLVDAVGVDAARYSLVRASMDSSLDLDLDVI 426 Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIF------PDLDFDLFPRNVIPQESEFDTSEL 496 Q+ +NPVFYVQYA+AR S+ R A + P D + +++ + E+ Sbjct: 427 ARQTNDNPVFYVQYAHARISSLIRNAAALGLATSADPAFDVEAVDVSLLTHQ-----REV 481 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK-- 554 +L+ L E PRVIE+A + P+++A YL +LA +H + R P Q + Sbjct: 482 ELLGALGELPRVIESAAALRAPHRIARYLEELAGTYHRFYDSCRVLP-----QGDEEATV 536 Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LT RL LV A ++ +GL+++GV +P M Sbjct: 537 LTAARLLLVEATRVVLANGLHLLGVGAPERM 567 >gi|114567927|ref|YP_755081.1| arginyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122317211|sp|Q0AU94|SYR_SYNWW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|114338862|gb|ABI69710.1| arginyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 559 Score = 342 bits (876), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 199/554 (35%), Positives = 312/554 (56%), Gaps = 32/554 (5%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFINL 91 +IE PR+ HG + N A++++R P IAE++V ++ V+ + IAG GFIN Sbjct: 37 LIEVPREKEHGDFACNVALLMARQARQAPRAIAEVLVELMEASGRPVEKIEIAGAGFINF 96 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +L S+L +I + S +YG N K KV +EFVSANPTG +H+G+ R +GDTLA Sbjct: 97 FLDRSWLYEIPLMVYKSKDKYGFNG-EKAKKVQVEFVSANPTGNLHMGNARGGAIGDTLA 155 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ +GYEV RE+YINDAG QI S+ RY Q L +D PE Y G L + Sbjct: 156 NILERAGYEVEREFYINDAGNQIEIFTDSMEARYLQ-LTGHDVQFPENGYAGRDLIDTVR 214 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 + +Y L + P E+ I+ D++++ + I+ L + I +D++ SE H + Sbjct: 215 NIIARYGEGLYDLPREERRQIIVDFALEEKIDYIQKTLASFGINYDVWFSEKSLH--ENG 272 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 I + ++L +GY+YE F+ST GD+ D +L+++G Sbjct: 273 KIMAVFNDLRDKGYIYES----------------EGAWWFKSTAFGDEKDEVVLRANGMP 316 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 TYF AD+AY + K+ERGFD +I V G+DH G+V R++ A+ A++++LL +LVRL Sbjct: 317 TYFMADIAYHQNKFERGFDWVINVWGADHHGHVARMKGAIEALGYDPARLDILLMQLVRL 376 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 YR G ++MSKR G ++L ++++VG D+ RF + R LDFD +++S+ENPV Sbjct: 377 YRGGNIVRMSKRTGTTVSLDELIEDVGKDAARFFFVMRSPDSHLDFDLELARQKSQENPV 436 Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511 +YVQYA+AR SIFRQA+ + N I + EL ++ +A++P I Sbjct: 437 YYVQYAHARICSIFRQAR----AEGITMAEINEIDISCLKEEEELAILRKIADFPEEISI 492 Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571 A P+++A Y+ DLA++FH ++H R V +NR L RL L+ I+ Sbjct: 493 AARTLAPHRIARYVLDLAALFHSFYNHHR-------VLNDNRALQDARLLLMEITRITIH 545 Query: 572 SGLNIIGVESPNEM 585 + L+++GV +P +M Sbjct: 546 NALDVLGVAAPEQM 559 >gi|309775278|ref|ZP_07670287.1| arginine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53] gi|308916941|gb|EFP62672.1| arginine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53] Length = 547 Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 202/555 (36%), Positives = 304/555 (54%), Gaps = 37/555 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFIN 90 IVIE P+D +HG STN AM L+R L +P IAE +V + D D++ IAG GFIN Sbjct: 29 IVIEIPKDKSHGDYSTNVAMQLTRMLKNNPRKIAEAVVEALDKDAADIERCEIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + + L +I++ ++ YG N G+G KVN+E+VSANPTG +H+GH R A GD++ Sbjct: 89 FTIKNTSLAQIITRVLHEQDSYGHNNDGEGLKVNVEYVSANPTGDLHLGHARGAAWGDSI 148 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 LM SGY+V REYY+NDAG QI L S+ RY++ L D DLPE Y G +K++ Sbjct: 149 TRLMKASGYDVCREYYVNDAGNQIVNLGKSLQARYREHL-GLDFDLPEDGYHGEDVKNIA 207 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 +AD+Y + + + L K+ + + IR DL + D++ SE D Sbjct: 208 IAIADEYKDAYVEYNDAN-LKFFKEKGIAFELDKIRRDLDNFRVHFDVWSSEQSIR--DA 264 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + +D L +G YE + L F +T GDD DR L K DGS Sbjct: 265 GKVEKALDVLHEKGLTYE----------------EDGALWFATTKFGDDKDRVLRKKDGS 308 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTY D+AY K K +RGFD ++ ++G+DH GY+ RL+A A+ ++ V + ++VR Sbjct: 309 YTYLVPDIAYHKDKLDRGFDMLVDLLGADHHGYIPRLKASIEALGNNPDKLQVDIIQMVR 368 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L +G +KMSKR G+ +T+R + +EVG D+VR+ + R LDFD ++QS +NP Sbjct: 369 LVENGEEVKMSKRLGNAVTIRELCEEVGVDAVRYFFVQRAVDTHLDFDLGLARKQSNDNP 428 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+Y QYA+AR SI RQA +I F+L E+ L+ ++ E+ V+ Sbjct: 429 VYYAQYAHARICSILRQASEIAEAQSFELLTHE----------KEIALMKYINEFTNVVS 478 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A ++ P+K+ Y+ LA FH ++ + N +L+ RL L+ A + Sbjct: 479 DAARSRAPHKVCNYIQKLAQHFHSFYNVCKVN------DPQQPELSSQRLALLKATKITL 532 Query: 571 NSGLNIIGVESPNEM 585 + L +IGV++ +M Sbjct: 533 KNALYLIGVDAIEKM 547 >gi|307546356|ref|YP_003898835.1| arginyl-tRNA synthetase [Halomonas elongata DSM 2581] gi|307218380|emb|CBV43650.1| arginyl-tRNA synthetase [Halomonas elongata DSM 2581] Length = 561 Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 209/586 (35%), Positives = 319/586 (54%), Gaps = 40/586 (6%) Query: 9 SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68 S L+ L+++ + + ++ I ++ +D AHG +TN A++L++P GL P +AE + Sbjct: 7 SLLERALEDLQRQAILPSELAPTIKVDPAKDKAHGDYATNLALMLAKPAGLKPRELAEKL 66 Query: 69 VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128 VA + V V IAG GFIN + + +++ ++ G +GR+L G+G KV +EFV Sbjct: 67 VAALPDSEAVSKVEIAGPGFINFFAATDAAAQVVREVLDGGDAFGRSLTGQGQKVQVEFV 126 Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188 SANPTGP+HVGH R A +GD L L+ +G++VTRE+Y NDAGAQI+ LALSV R + Sbjct: 127 SANPTGPLHVGHGRGAAIGDCLCRLLEATGFDVTREFYYNDAGAQISNLALSVQARAKGV 186 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKEL-------ADKYSSELLNFPEEKWLPIVKDYSVQAM 241 +D+ P Y G Y+ V K AD P++ L ++D++V + Sbjct: 187 TPEDDA-WPADGYRGDYITDVAKAYLAGETVHADDRHVTAKADPDD--LDAIRDFAVAYL 243 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 + DL+A + D++ E +R + D LA QG+ YE Sbjct: 244 RREQDLDLRAFGVAFDVYFLESSLYR--DGKVADTAKRLAEQGHTYE------------- 288 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 R+T GDD DR + K DG YTYF D+AY K++RGF +I G+DH Sbjct: 289 ---HDGATWLRTTDFGDDKDRVMRKRDGDYTYFLPDVAYHLDKWQRGFTTVINEQGADHH 345 Query: 362 GYVKRLEA--VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 V R+ A A V + + +L ++V + R G+ +K+SKRAG ++TLR ++DEVG Sbjct: 346 STVTRVRAGLQALGVGIPEGWPDYVLHQMVLVTRSGVEVKLSKRAGSYVTLRDLIDEVGR 405 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ RF + R+ L FD + QS +NPV+YVQYA+AR S+ R+A+ D +L Sbjct: 406 DATRFFLAARRADSQLTFDIDLARSQSNDNPVYYVQYAHARVCSMLRKAQADERPFDHEL 465 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 N+ ++E E L+ LA YP V+E A +A+EP ++A YL DLA+ FH + Sbjct: 466 AMDNLALLDTE---QEKALLNRLARYPEVVERAALAREPQQIAQYLQDLAAEFHTCY--- 519 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N V+ + R+ RL L A ++ +GL+++GV +P EM Sbjct: 520 --NAVKVMVEDDARR--NARLALGLAARQVLRNGLDLLGVSAPEEM 561 >gi|222152067|ref|YP_002561227.1| arginyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402] gi|222121196|dbj|BAH18531.1| arginyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402] Length = 551 Score = 341 bits (874), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 197/557 (35%), Positives = 311/557 (55%), Gaps = 39/557 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90 I IE P+D +G +TN AM+L++ +P IA+ IV + + DV V IAG GFIN Sbjct: 31 IKIENPKDTKNGDYATNIAMVLTKLAKRNPREIAQAIVDNLDVQKADVSKVDIAGPGFIN 90 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 Y+ SYL I++ + +++G+ K ++ +E+VSANPTG +H+GH R A VGDTL Sbjct: 91 FYMDNSYLTGIITEALTKKVDFGKGE-PKDERILVEYVSANPTGSLHIGHARNAAVGDTL 149 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +++++ +GY+V REYYINDAG QI LA S+ R+ QAL D LP Y G + +G Sbjct: 150 SNVLSAAGYDVLREYYINDAGKQIENLAYSIEARFLQAL-GEDKALPADGYHGKDIIEIG 208 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K+LA+K+ E + E + + + + M+ ++ DL N+ D + SE + Sbjct: 209 KDLAEKHP-EYKDVEEAERIKAFRKLGLDYEMEKLKKDLTEFNVHFDNWFSETSLYEN-- 265 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I ++ + ++GY++E + R+T GDD DR L+K DGS Sbjct: 266 KKIDKALEQMRQRGYIFE----------------EDGATWLRTTEFGDDKDRVLIKKDGS 309 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTYF D+AY K ERG+D +I + G+DH GY+ RL+A ++ + + ++VR Sbjct: 310 YTYFLPDIAYHYDKIERGYDTLINLFGADHHGYINRLKASLETFGVDSKRLEIQVMQMVR 369 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L +DG +KMSKR G+ ITLR ++DEVG D+ R+ + R DFD K +S +NP Sbjct: 370 LLQDGQEVKMSKRTGNAITLRDIMDEVGIDAARYFLTMRSPDSHFDFDMELAKSESSDNP 429 Query: 451 VFYVQYAYARCRSIFRQAKD--IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 V+Y QYA+AR S+ RQAK+ I P D + +I E F +L+ +A++ V Sbjct: 430 VYYAQYAHARICSMLRQAKEAGITPSRDANY---ALITNEKAF-----ELLKRVADFESV 481 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 IE A + P+++ Y+ DLA+ FH ++ + V ++ + + + ++ AV Sbjct: 482 IEQAAEHRAPHRITNYIQDLAAHFHKFYNAEK-------VLTDDIEKSRAYVAMIEAVRI 534 Query: 569 IINSGLNIIGVESPNEM 585 + + L ++GV SP +M Sbjct: 535 TLQNALTLVGVSSPEKM 551 >gi|169832318|ref|YP_001718300.1| arginyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C] gi|238688349|sp|B1I6Q5|SYR_DESAP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|169639162|gb|ACA60668.1| arginyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C] Length = 563 Score = 341 bits (874), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 199/563 (35%), Positives = 324/563 (57%), Gaps = 46/563 (8%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD--VDSVFIAGKGFI 89 +E PR+ HG +TN A++L++P P IAE++V+ + + P+ V V +AG GFI Sbjct: 38 FTVEVPREKNHGDFATNLALLLTKPARRSPRQIAEILVSHLSL-PELLVKEVTVAGPGFI 96 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N L P++L +L I G YGR +G G KV +EFVSANPTG +H+G+ R A +GD+ Sbjct: 97 NFRLDPNWLHGVLPEIETWGEHYGRRNLGGGRKVQVEFVSANPTGLLHMGNARGAALGDS 156 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE-GYYPGVYLKH 208 +A+L++F G++VTRE+Y+NDAG Q+ LALS+ RY QAL D +PE GY+ + Sbjct: 157 IAALLSFVGFDVTREFYVNDAGHQVENLALSMEARYFQAL-GRDWPVPEDGYHGEDLIDT 215 Query: 209 VGK---ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 G+ E D+++S P+E+ +++ ++++ + +R L++ +++D++ SE Sbjct: 216 AGRFVAEHGDRFAS---GDPDERRGALLR-FALEEKLAAMRATLESFGVRYDVWFSEQSL 271 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 + D + + ++ L ++G++YE L F++ G D D L+ Sbjct: 272 Y--DRGVVGETLELLKKRGHLYE----------------RDGALWFKAGAFGGDKDEVLV 313 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 + +G TYFAAD+AY K KY+RGFD +I V G+DH G+V R++ AA+ ++V++ Sbjct: 314 RRNGVPTYFAADIAYHKDKYDRGFDWVINVWGADHHGHVPRMKGALAALGYDPDALDVVI 373 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 +LVRLYR G ++MSKR G ++TL +++EVG D+ R+ + R LDFD K + Sbjct: 374 MQLVRLYRGGEIVRMSKRTGRYVTLDELLEEVGRDAARYFFVTRGADSHLDFDLDLAKSR 433 Query: 446 SKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 + ENPV+Y+QYA+AR SIFRQ ++ P + P + +E +E LI L Sbjct: 434 TNENPVYYIQYAHARISSIFRQLEERGRTAP--GYRKIPDVTLLKEE----AERALIRRL 487 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 A++P + A P+++A Y++DLA +FH ++ R V L RL L Sbjct: 488 ADFPDEVAQAAYDLAPHRIAHYVHDLAGLFHHFYNAHR-------VLGAGDGLEEARLML 540 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 V+ ++ + L ++GV +P M Sbjct: 541 VNCTRVVLRNALTLLGVSAPERM 563 >gi|289207432|ref|YP_003459498.1| arginyl-tRNA synthetase [Thioalkalivibrio sp. K90mix] gi|288943063|gb|ADC70762.1| arginyl-tRNA synthetase [Thioalkalivibrio sp. K90mix] Length = 587 Score = 340 bits (873), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 204/590 (34%), Positives = 308/590 (52%), Gaps = 68/590 (11%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + + R RD HG ++N AM L+RP P +AE + A + P + IAG GFIN Sbjct: 30 VQVTRARDREHGDFASNLAMQLARPAKAKPRDLAEALCAAMPAVPGLAGTEIAGPGFINF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+ ++L I G ++GR+ +G G V +EFVSANPTGP+HVGH R A G T+A Sbjct: 90 RLAADARTQVLGRIAAQGADFGRSSVGNGRPVQVEFVSANPTGPLHVGHGRGAAFGATVA 149 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 L+ F G++VTREYY+NDAG Q+N LA SV+ RY + + P Y G Y+ V + Sbjct: 150 DLLDFCGFDVTREYYVNDAGRQMNILAASVWLRYLEQ-HGVQVPFPTNGYQGDYIYPVAE 208 Query: 212 ELADKYSSELLNF---------PEE-----------------------KWLPIVKDYSVQ 239 L + + ++ P+E + V D + Sbjct: 209 SLTAQIGEQAVHPATAVTRDLPPDEPAGGDKEVYIDAVIARARELLGPELYRTVFDCGLN 268 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 A+++ IRDDL+ +++ + SE D I + +L G +YE Sbjct: 269 AILEDIRDDLREFGVEYQCWFSERSL--ADSGAIDAAVQDLQAHGALYE----------- 315 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 L FRST GDD DR + + +G YTYFA+D+AY + K++RGF+ +I + G+D Sbjct: 316 -----QDGALWFRSTDYGDDKDRVVRRENGDYTYFASDIAYHREKFQRGFERVINIWGAD 370 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYV R+ A A+ + +++VLL + LYR G + MS RAG F+TLR + DEVGS Sbjct: 371 HHGYVPRVRAALQALGLEADRLDVLLVQFAILYRGGERLPMSTRAGQFVTLRELRDEVGS 430 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL---- 475 D+ RF + R+ + LDFD K QS +NP++Y+QYA+AR S+ R A + Sbjct: 431 DAARFFYVQRRCDQHLDFDLDLAKSQSNDNPMYYIQYAHARIASVLRTAAERGHTASALD 490 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 D L PQE + L+ L +P VI A A EP+++A YL +LA+ FH + Sbjct: 491 DTGLSACLTEPQEDD-------LLDRLDRFPEVIAAAAEACEPHQIAQYLRELAAGFHTY 543 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + F+ A + + RL L+ + ++++GL ++GV +P M Sbjct: 544 YNA------VPFLNAEDATVIGARLALLTGIKQVLHNGLRLLGVTAPERM 587 >gi|53802759|ref|YP_115476.1| arginyl-tRNA synthetase [Methylococcus capsulatus str. Bath] gi|81680656|sp|Q602H4|SYR_METCA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|53756520|gb|AAU90811.1| arginyl-tRNA synthetase [Methylococcus capsulatus str. Bath] Length = 586 Score = 340 bits (873), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 210/588 (35%), Positives = 313/588 (53%), Gaps = 65/588 (11%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + IER RD AHG + N AM+L++ DP +AE I A + DP V IAG GFIN Sbjct: 30 LQIERTRDPAHGDFAANTAMLLAKSARCDPRRLAEKIRAALPEDPAVIRTEIAGPGFINF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +L ++++ I G +GR+ IG G +V +EFVSANPTGP+HVGH R A G +A Sbjct: 90 FLDAIAQHRVITDIHSQGPGFGRSSIGAGQRVQVEFVSANPTGPLHVGHGRGAAYGAVVA 149 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHV 209 L+ +G++V REYY+NDAG Q++ LA SV+ RY L N LP Y G Y++ + Sbjct: 150 DLLEAAGFDVHREYYVNDAGRQMDILAASVWLRY---LENCGEVLPFPANGYRGEYVRDI 206 Query: 210 GKEL----ADKYSSE----LLNFP--------EEKWLPIVKDYS---------------- 237 +L ++Y + LL P +E+++ V S Sbjct: 207 ASDLYRTQGERYRTSADQVLLGLPPDEPQGGDKEEYIDAVVSKSKNLLGPERYREVFNAG 266 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 + +++ IRDDL + + SE + + ++ L GYVYE Sbjct: 267 LDSILDDIRDDLGEFGTHYQEWFSERSLT--ETGAVERALERLKSSGYVYE--------- 315 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 D Q F ST +GD+ DR L++ +G TYFA+D+AY K ERGFD ++ V G Sbjct: 316 ------KDGAQW-FASTRLGDEKDRVLVRENGQTTYFASDVAYHLNKLERGFDRIVNVWG 368 Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 +DH GY+ R++A A+ +++ VLL + LYR ++MS R+G+F+TLR + +EV Sbjct: 369 ADHHGYIPRVKAAIQALGGDASKLEVLLVQFAVLYRGTERVQMSTRSGEFVTLRQLRNEV 428 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G D+ RF + RK+ + +DFD ++ ENPV+YVQYA+AR S+FRQ + D Sbjct: 429 GKDAARFFYVMRKSDQHMDFDLKLATSRTNENPVYYVQYAHARVCSVFRQLDEKGWARDL 488 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 R + E + EL L+ L+ YP V+E A + P+ L YL DLA+ FHG+++ Sbjct: 489 G---RGMRRLERLCEPHELTLVASLSRYPEVVEQAALQYAPHHLVHYLRDLAAEFHGYYN 545 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +F+ + L RL L+ AV +I +GL ++GV +P M Sbjct: 546 S------CQFL-VEDGDLRDARLNLIDAVRQVIANGLGLLGVSAPETM 586 >gi|260886946|ref|ZP_05898209.1| arginine--tRNA ligase [Selenomonas sputigena ATCC 35185] gi|330839265|ref|YP_004413845.1| Arginyl-tRNA synthetase [Selenomonas sputigena ATCC 35185] gi|260863008|gb|EEX77508.1| arginine--tRNA ligase [Selenomonas sputigena ATCC 35185] gi|329747029|gb|AEC00386.1| Arginyl-tRNA synthetase [Selenomonas sputigena ATCC 35185] Length = 551 Score = 340 bits (873), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 212/559 (37%), Positives = 303/559 (54%), Gaps = 38/559 (6%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 L I++E P D G +TN AM +R ++P IAE +V+RI+ D +D IAG GF Sbjct: 29 LADILLEVPPDKKFGDFATNFAMQSARVFRMNPKKIAEELVSRIEGDW-LDHAEIAGPGF 87 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT-KVNIEFVSANPTGPMHVGHCRCAVVG 147 IN YL + L +L I G E NL K T ++ +E+VSANPTG +HVGH R A VG Sbjct: 88 INFYLKGNVLYDLLRHIYEGG-EACFNLPQKDTARIMVEYVSANPTGLLHVGHGRGAAVG 146 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 L +L+ +GY V EYYINDAG QI+ LA SV RY + L ++ PE Y G + Sbjct: 147 SALVNLLRAAGYPVHSEYYINDAGNQIDNLAASVNARYLE-LLGKETAFPENGYHGADII 205 Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 K + + + L+ EE+ L K+ +++ + +++DL A N+ D + SE H Sbjct: 206 DTAKRIVEADGEKYLSLSEEQRLAAFKEIALKEKLAQLKEDLAAFNVTFDEWFSERTLH- 264 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 P +RD L +G VY D D L RST GDD DR +++ Sbjct: 265 --PEAVRDACQTLKEKGKVY---------------DKD-GALWLRSTDYGDDKDRVVIRD 306 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387 +G TY AAD+AY + K ERGF ++I + G+DH GYV R++A AA+ Q+ VLL + Sbjct: 307 NGVPTYLAADIAYHRNKLERGFGHLINIWGADHHGYVCRVKAALAALGYAPEQLEVLLLQ 366 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 +V LYR G +KMSKR G+ +TL +++EVG+D+ R+ L R LDFD K S Sbjct: 367 MVSLYRGGELVKMSKRTGESVTLEELIEEVGTDAARYFFLMRSLDSQLDFDLDLAKSHSN 426 Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYP 506 ENPV+Y+QYA+AR SIFRQA D P+ S D +E+ LI + EY Sbjct: 427 ENPVYYIQYAHARISSIFRQAADAG-------IETGGAPEFSRLIDETEIALIKKIEEYA 479 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 IE A + P+++A + YD A +FH ++ R + L+ RL LV Sbjct: 480 EEIERAARERAPHRIARFAYDTAGLFHSFYNKCR-------IVGVEPALSGARLALVAVA 532 Query: 567 ASIINSGLNIIGVESPNEM 585 +++ L I+G+ +P +M Sbjct: 533 RNVLRHALGILGISAPEKM 551 >gi|212703468|ref|ZP_03311596.1| hypothetical protein DESPIG_01512 [Desulfovibrio piger ATCC 29098] gi|212673082|gb|EEB33565.1| hypothetical protein DESPIG_01512 [Desulfovibrio piger ATCC 29098] Length = 551 Score = 340 bits (873), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 203/569 (35%), Positives = 318/569 (55%), Gaps = 56/569 (9%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFI 89 + VIE PRD HG L+ N AM+L+R +P +A++ V ++ + D++ V +AG GF Sbjct: 25 KAVIEPPRDPKHGDLAANIAMLLAREAHKNPRELAQVFVEKLPQRCADIEKVEVAGPGFC 84 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N+ S + RK + + +G YG++ +G+G K +E+VSANPTGP+HVGH R A VGD+ Sbjct: 85 NVTFSQHFWRKTVCEVEAAGAAYGQSSVGQGRKTLVEYVSANPTGPLHVGHGRGAAVGDS 144 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 LA L+ +G++V EYYINDAG Q+ L LSV+ R ++ L + PE YY G Y+ + Sbjct: 145 LARLLRKAGFDVETEYYINDAGRQMRILGLSVWLRVKE-LAGRPVEWPEDYYRGSYIIDI 203 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQ------AMMKI---IRDDLKALNIQHDIFI 260 +E+ E+ LP ++D + Q AM +I I+ DL ++H + Sbjct: 204 AREM----------LAEDPSLPDMEDQAGQDRCYERAMNEILDGIKADLADFRVEHQHWF 253 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE + ++ D L G+ + D D F + +GDD Sbjct: 254 SEKTLV--ESGAVKAAFDALTEAGHTF---------------DKD-GAFWFATQALGDDK 295 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR L KSDGS TYFA+D+AY K++RG+D +I + G+DH GYV R+ A A+ + + Sbjct: 296 DRVLRKSDGSLTYFASDIAYHHNKFQRGYDWLIDIWGADHHGYVPRMRAAITAMGKPRES 355 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 +V+L +LV L + G P+ MS RAG F TL VV EVG+D+ RFM L RK+ LDFD Sbjct: 356 FDVVLIQLVNLLQGGKPVSMSTRAGTFETLADVVKEVGADAARFMFLSRKSDTSLDFDLE 415 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSE-L 496 K++S +NPV+YVQYA+AR ++ R+A++ P D + DT E + Sbjct: 416 LAKQRSLDNPVYYVQYAHARICAVLRRAEERGITLPAAATDELL-------AALDTPEDM 468 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 L+ +A + ++ A A + ++ YL DLA + H +++ + + + A++ T Sbjct: 469 ALLRKMAGFEDMVATAAQALAVHHVSHYLMDLAGMLHSYYA------KHQVLLADDTART 522 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL L+ AV+ ++ +GL+++GV +P M Sbjct: 523 LSRLALLRAVSQVLRNGLDLLGVSAPEVM 551 >gi|295099684|emb|CBK88773.1| arginyl-tRNA synthetase [Eubacterium cylindroides T2-87] Length = 544 Score = 340 bits (872), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 206/561 (36%), Positives = 306/561 (54%), Gaps = 48/561 (8%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 + IVIE P+ HG STN AM L+R L +P IAE IVA I+ + +V+ + IAG GFI Sbjct: 27 NNIVIETPKVKDHGDFSTNVAMQLTRQLRQNPRMIAEKIVANIESE-NVEKMDIAGPGFI 85 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N LS K++ ++ +G+ G KVN+E+VSANPTG +H+GH R A GD+ Sbjct: 86 NFILSKGRFTKVIEEVLSKRENFGQQ-PSNGIKVNLEYVSANPTGSLHLGHARGAAWGDS 144 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 A +M +GY+VTREYY+NDAG QI LALS+ RY+QA + ++++ + Y G +K Sbjct: 145 CARIMKKAGYDVTREYYVNDAGNQITNLALSLNARYRQA-HGIETEIGQDGYLGEDVKQK 203 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 ++LA Y + L P E+ L + ++ + I+ DL + D++ SE D Sbjct: 204 AEQLAKDYPEKYLE-PTEENLKFFRKEGIKFELDKIKADLDNYRVHFDVWSSEQTIR--D 260 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + + L +GY YE L F++T +GDD DR L K+DG Sbjct: 261 SGDVDRALKVLDEKGYTYES----------------EGALWFKTTELGDDKDRVLRKTDG 304 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 SYTY D+AY KY+RG+D ++ +G+DH GY+ RL+A A+ ++NV + ++V Sbjct: 305 SYTYLVPDIAYHNDKYKRGYDLLVDFLGADHHGYIPRLKASMQALGNDPDKLNVDIIQMV 364 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 RL DG +KMSKR G+ T+ + D VG D+ R+ + R LDFD K QS +N Sbjct: 365 RLVSDGKEVKMSKRLGNATTINELCDSVGVDAARYFFVQRALDSHLDFDIELAKRQSNDN 424 Query: 450 PVFYVQYAYARCRSIFRQAKDI-----FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 PV+Y QYA+AR SI +QAKDI F DL D E++L+ L E Sbjct: 425 PVYYAQYAHARMCSIQKQAKDIELADSFEDL---------------TDEKEIELMKTLQE 469 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 + +VI + ++ +K+ Y+ LAS FH ++ + + +N KL+ RL LV Sbjct: 470 FNKVIIESAKTRQVHKVCHYIQTLASKFHSFYN------ACKVIDRDNMKLSSQRLALVK 523 Query: 565 AVASIINSGLNIIGVESPNEM 585 A ++ + L +GVE+ M Sbjct: 524 ATQIVLANALETVGVEAVESM 544 >gi|158312858|ref|YP_001505366.1| arginyl-tRNA synthetase [Frankia sp. EAN1pec] gi|229558759|sp|A8L3U5|SYR_FRASN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|158108263|gb|ABW10460.1| arginyl-tRNA synthetase [Frankia sp. EAN1pec] Length = 570 Score = 340 bits (871), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 204/582 (35%), Positives = 306/582 (52%), Gaps = 54/582 (9%) Query: 24 VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83 +E + D + +ERPR HG ++ A+ L++ P +AEL+ AR++ + V V + Sbjct: 23 LEVAVPDSVTVERPRQPEHGDYASPVALQLAKAARRRPREVAELLAARLRAEAGVAEVEV 82 Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143 AG GF+N+ L+ + L I IV G YGR + +G +VN+EFVSANPTGP+ + R Sbjct: 83 AGPGFLNIRLAGAALGGIARRIVRDGESYGRAAVSQGVRVNLEFVSANPTGPVTLASARW 142 Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYY 201 A VGD L+ + A +GYEV EYY+NDAG Q+ SV R Q A P Y Sbjct: 143 AAVGDALSRVFAAAGYEVGTEYYVNDAGVQVERFGASVLAALRGQPA--------PADGY 194 Query: 202 PGVYLKHV-GKELADKYSSELL----------NFPEEKWLPIVKDYSVQAMMKIIRDDLK 250 G Y+ + K LA + E L ++K L + V+ M+ IR L Sbjct: 195 QGAYVAEIAAKVLAANPALEQLLAASGGEQDSGAEQDKALAVCARDGVELMLAEIRATLS 254 Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310 +++D++ SE H + + ID L QG+VYE + Sbjct: 255 GFGVEYDLWKSERSLH--EAGELIAAIDELRTQGHVYEA----------------GGAVW 296 Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 R+T GDD DR L+KSDG TYF AD AY++ K RGFD + Y++G+DH GY+ RL+A+ Sbjct: 297 LRTTDFGDDKDRALIKSDGRPTYFCADAAYYRDKRRRGFDRLCYLLGADHHGYIGRLKAI 356 Query: 371 AAAVSEK-KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429 +A + ++VL+ ++V L R G+ +KMSKRAG+F+TL +VD VG D+ R+ ++ Sbjct: 357 SACFGDDPDHNLDVLIGQMVTLSRGGVAVKMSKRAGNFLTLHDLVDAVGVDAARYSLVRA 416 Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF------PDLDFDLFPRN 483 LD D + Q+ +NPVFYVQYA+AR S+ R A + P D D + Sbjct: 417 SMDSALDLDLDAIARQTNDNPVFYVQYAHARISSLIRNAAALGLATSADPAFDVDGVDVS 476 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ E D L+ L E PRV+E+A + P+++A YL +LA +H + R P Sbjct: 477 LLTHPREVD-----LLGALGELPRVVESAAELRAPHRIARYLEELAGTYHRFYDSCRVLP 531 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +T RL L A +++ +GL ++GV +P M Sbjct: 532 Q---GDEEPTAITAARLLLAEATRTVLANGLRLLGVSAPERM 570 >gi|323706265|ref|ZP_08117832.1| arginyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11] gi|323534429|gb|EGB24213.1| arginyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11] Length = 562 Score = 340 bits (871), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 201/557 (36%), Positives = 318/557 (57%), Gaps = 34/557 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90 + IE P++ G L+ N AMI+++P + P IAE+I +K++ ++ V IAG GF+N Sbjct: 37 VEIEEPKEKQFGDLAINTAMIMAKPAKMPPRKIAEIIKDGLKLEGTMIEKVEIAGPGFMN 96 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL+ Y + L I G +YGR IG G +V +EFVSANPTGPMH+G+ R +GD L Sbjct: 97 FYLNDDYNVEALMLIKEKGPDYGRVNIGNGKRVQVEFVSANPTGPMHMGNARGGALGDAL 156 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +S++ ++GY+VTRE+YINDAG QI LS+ RY Q L D+++PEG Y G + Sbjct: 157 SSILDYAGYDVTREFYINDAGNQIEKFGLSLEARYLQ-LLGEDAEVPEGGYHGDDIIERA 215 Query: 211 KELADKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 KE + Y + + PEE+ +++ Y ++ + +++DL+A I++D++ SE+ H + Sbjct: 216 KEFLELYGDKYKDADPEERRKALIQ-YGLKKNIAKLKEDLEAYGIEYDVWFSENTLH--E 272 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 ++ +I+ L +GY YE L F+ T+ G + D L++++G Sbjct: 273 SGEVQSVIEELKEKGYTYE----------------KDGALWFKETLFGAEKDDVLVRANG 316 Query: 330 SYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 TY A+D+AY K K+ RGFD +I + G+DH G+V ++ A+ +++VLL +L Sbjct: 317 FPTYLASDIAYHKNKFVTRGFDWVIDIWGADHHGHVAPMKGAMKALGIDPDRLDVLLMQL 376 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 VRL + ++MSKR G +TLR ++DEVG D+ RF R +DFD EQS E Sbjct: 377 VRLMKGKEVVRMSKRTGKMVTLRDLIDEVGKDAARFFFNMRSADSAVDFDMDLAVEQSNE 436 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 NPVFYVQYA+AR SI RQ K+ +D D + SE +E+ LI LA P Sbjct: 437 NPVFYVQYAHARICSILRQLKE--DGIDTDNLKEVNLKLLSE--DTEISLIKKLAYLPEE 492 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 I A P+++ Y+ D++S+FH ++ R V+ + +L R+ L+ A Sbjct: 493 ITIAANTMAPHRITRYILDVSSLFHTFYNSCR-------VRGVDEELMKARIVLIDATRI 545 Query: 569 IINSGLNIIGVESPNEM 585 +I + L+++ + +P +M Sbjct: 546 VIKNVLDMLKITAPEKM 562 >gi|198282489|ref|YP_002218810.1| arginyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665719|ref|YP_002424679.1| arginyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270] gi|226701628|sp|B7J3R6|SYR_ACIF2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|238689961|sp|B5EL87|SYR_ACIF5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|198247010|gb|ACH82603.1| arginyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517932|gb|ACK78518.1| arginyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 579 Score = 339 bits (870), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 202/607 (33%), Positives = 323/607 (53%), Gaps = 62/607 (10%) Query: 8 SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 S L+ L+++ + ++ I + ++RP+ HGHL++N A++L++ +G P IA+ Sbjct: 6 SQALQGALQQLHAQGRI-PGIPATLELDRPKQVEHGHLASNVALLLAKAVGRKPRDIADD 64 Query: 68 IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127 IVA + + IAG GFIN +L P+ ++ + +G N G G ++ +EF Sbjct: 65 IVAALPASDWIARTEIAGPGFINFFLQPAAFHAVIHRVRTEKEHFGANRNGAGQRLQMEF 124 Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187 VSANPTGP+HVGH R A G +LA+++ F+G+++ EYY+NDAG Q++ LA SV+ RY + Sbjct: 125 VSANPTGPLHVGHGRGAAYGASLANILRFNGFDIFCEYYVNDAGRQMDILAASVYLRYLE 184 Query: 188 ALYNNDSDLPEGYYPGVYLK----HVGKELADKYSSELLNFPEEKWLPIVKDYSV----- 238 A PE Y G Y++ H+ +++ D+ + P LP + D + Sbjct: 185 ADKALPWPFPENGYRGDYVREIAAHLREQVGDRLRHAAVGLPN---LPQMSDGDIAIDTL 241 Query: 239 --------------------QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 ++ IRDDL+ + ++ + SE D + + Sbjct: 242 IAHLKQSLGEDYRTLHSAGLDEILADIRDDLEGFGVHYERWYSEGSLM--DTGAVDSAVA 299 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 L + G+ Y TQ+ L FR+T DD DR L + +G+YTYFA+D+ Sbjct: 300 ALEKAGHCY-----------TQEG-----ALWFRATAFDDDKDRVLRRDNGAYTYFASDV 343 Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 AY K+ RGF ++I + G+DH GYV R++A A+ Q+ V+L + LYR I Sbjct: 344 AYHAEKFARGFTHVIDMWGADHHGYVPRVKAALRALGLDDQQLEVVLVQFAILYRGTEKI 403 Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 MS RAG+F+TLR + +EVG+D+ RF + R+ + LDFD K+ S+ENPVFY+QYA+ Sbjct: 404 SMSTRAGEFVTLRELREEVGNDAARFFYVLRRADQHLDFDLELAKKHSEENPVFYIQYAH 463 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 AR S+ RQ+ + L P + + E ++ E+ L L +P V+ A +EP Sbjct: 464 ARVYSLLRQSVEK----GLSLPPADGVGLEILQESREIALADALWRFPEVVATAARDREP 519 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 +++AFYL +LA+ FH +++ R + L RL L AVA I +GL ++G Sbjct: 520 HQIAFYLRELAAAFHTYYNSTR-------ILVEETPLRHARLTLCLAVAQSIANGLRLLG 572 Query: 579 VESPNEM 585 V +P +M Sbjct: 573 VSAPEQM 579 >gi|289432951|ref|YP_003462824.1| arginyl-tRNA synthetase [Dehalococcoides sp. GT] gi|288946671|gb|ADC74368.1| arginyl-tRNA synthetase [Dehalococcoides sp. GT] Length = 556 Score = 339 bits (870), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 195/555 (35%), Positives = 317/555 (57%), Gaps = 34/555 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I IE P+ +G +T+ + L++ G P+ +A+++ + I+ + V +A GFIN Sbjct: 35 ISIEHPQKTNYGDYATSLPLRLAKATGKRPMELAQILASYIETGSGISKVSVAPPGFINF 94 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 S +L ++ +I+ YG +G G++V IEFVSANPTGP+H+GH R AV+G TL+ Sbjct: 95 TFSKEWLCSLVKTILTEAGSYGNINMGGGSRVQIEFVSANPTGPIHIGHGRGAVLGSTLS 154 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ +GY V E+YINDAG+QI+ ++F RYQQAL D+ +P+ Y G Y+ + Sbjct: 155 NILKAAGYYVEEEFYINDAGSQIDAFKRTLFARYQQAL-GKDAAVPQDGYHGQYMVDLAA 213 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 E+ KY + L P + + + + M+ +I DDLKAL + DI+ SE + G Sbjct: 214 EMVTKYGDKYLQMPADIAQNDLGEIGMTRMLCLISDDLKALKVDFDIWFSERSLYSG--G 271 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + +D L+ Y+ E + T F ST++GD D +++SDG+ Sbjct: 272 QYKTAMDILSGNNYIAE------RDNAT----------WFSSTLLGDSKDNVIVRSDGTP 315 Query: 332 TYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFA+D+AY K+ ER FD +I + G+DH G+V R++A+ +A+ ++ LL +++ Sbjct: 316 TYFASDIAYHYNKFIERKFDRVINIWGADHQGHVSRMKAMVSALGINPERLTTLLFQMIT 375 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L R G +++SKR G+ I+LR V++EVG+D+ RF L R +DFD K++S ENP Sbjct: 376 LKRGGELVRLSKRTGEIISLREVIEEVGADACRFFFLARSTESQMDFDLELAKKESAENP 435 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+YVQYA+AR SI A++ LD+ + + + +EL+LI +AE P ++E Sbjct: 436 VYYVQYAHARICSILHLAEE--NQLDY-----STGDTDLLGEEAELELIRKMAELPEIVE 488 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 + EP+ L +Y +LA+ FH + R V ++N +LT RL+LV A ++ Sbjct: 489 TVSRTLEPHHLTYYAQELANAFHQFYKDCR-------VISDNAELTCARLKLVDASRIVL 541 Query: 571 NSGLNIIGVESPNEM 585 L+++G+ SP M Sbjct: 542 ARTLHLMGMTSPESM 556 >gi|329734087|gb|EGG70406.1| arginine--tRNA ligase [Staphylococcus epidermidis VCU028] Length = 553 Score = 339 bits (870), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 199/578 (34%), Positives = 308/578 (53%), Gaps = 43/578 (7%) Query: 15 LKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72 ++EI+ I+ D I IE P+D +G S+N AM+L++ +P IA+ IV + Sbjct: 12 IEEIEASIRKANLTEDIPEIKIEIPKDTKNGDYSSNIAMVLTKIAKRNPREIAQAIVDHL 71 Query: 73 KID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131 V V IAG GFIN YL YL I+ + G +G K T + +E+VSAN Sbjct: 72 DTSKAHVKQVDIAGPGFINFYLDNQYLTDIIPEAITKGDRFGYATQSKNTNILLEYVSAN 131 Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 PTG +H+GH R A VGD+LA+++ +GY VTREYYINDAG QI LA S+ RY +AL + Sbjct: 132 PTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLARSIEARYFEALGD 191 Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251 ++P Y G + +GK+LA K+ E+ ++ +E+ L + V M+ ++ DL Sbjct: 192 TSYEMPADGYNGKDIIEIGKDLAVKHP-EIKDYSDEERLKTFRQLGVDYEMEKLKKDLSD 250 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 N+ D + SE + I++ + + GY YE Sbjct: 251 FNVHFDNWFSETSLYEN--GAIKNTLSKMKELGYTYEA----------------DGATWL 292 Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371 R++ DD DR L+K DG+YTYF D AY K RG D +I +MG+DH GY+ RL+A Sbjct: 293 RTSEFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGADHHGYINRLKASL 352 Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431 ++ + + ++VRL ++G +KMSKR G+ ITLR ++DEVG D+ R+ + R Sbjct: 353 ETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGIDAARYFLTMRSP 412 Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQ 487 DFD KEQS++NP++Y QYA+AR SI +QAK ++ D DF + Sbjct: 413 DSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEQGIEVSTDADFSKINND---- 468 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 + L+ +AE+ IE+A + P++L Y+ DLA+ FH ++ + Sbjct: 469 ------KAIDLLKKVAEFESTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAEK------- 515 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V ++ + T + ++ AV +++ L ++GV +P M Sbjct: 516 VLTDDTEKTKAHVAMIEAVRITLHNALALVGVTAPESM 553 >gi|119715977|ref|YP_922942.1| arginyl-tRNA synthetase [Nocardioides sp. JS614] gi|119536638|gb|ABL81255.1| arginyl-tRNA synthetase [Nocardioides sp. JS614] Length = 522 Score = 339 bits (869), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 200/560 (35%), Positives = 317/560 (56%), Gaps = 44/560 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + +ERPR HG +TN A+ L + G++P +A L+ R++ + V IAG GF+N+ Sbjct: 1 MTVERPRSKEHGDYATNVALQLGKKAGMNPRDLATLVQQRLEQTDGIAGVDIAGPGFLNI 60 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 ++ + + IV +G YG + +G +VN+EF+SANPTGP+H+GH R AVVGD ++ Sbjct: 61 TVAAGAQGIVAAEIVDAGAAYGHTDVLRGERVNVEFISANPTGPLHLGHTRWAVVGDAIS 120 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ G VTRE+YIND G Q++ S+ + A + P+ Y G Y+ + + Sbjct: 121 RVLEAGGATVTREFYINDRGNQMDLFGASI----EAAALGKPT--PDDGYHGGYIADLAR 174 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 ++ + +L P+E+ L ++ + ++ L N D++ SE H D Sbjct: 175 QIVAE-DPAILELPDEERLVAFREQGYALQLAQQQEQLARFNTVFDVWFSERSLH--DSD 231 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + +D L QG++YE D L R+T GDD DR L++S+G Sbjct: 232 DVAAGLDKLRAQGHLYE----------------DDGALWMRTTDFGDDKDRVLIRSNGEL 275 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA-AVSEKKAQINVLLCELVR 390 TYFA+D AY+ K ERGFD IY++G+DH GYV RL+A+AA A + + I VL+ +LV+ Sbjct: 276 TYFASDTAYYVNKRERGFDRCIYLLGADHHGYVGRLKAMAACAGDDPERNIEVLIGQLVK 335 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 + R G +++SKRAG+ ++L ++DE+G+D++R+ + L D ++ +QS ENP Sbjct: 336 IVRGGEEVRLSKRAGEIVSLEELIDEIGTDALRYSLARYPADSPLTLDIAEITKQSSENP 395 Query: 451 VFYVQYAYARCRSIFRQAKDI---FPDLDFD--LFPRNVIPQESEFDTSELQLIVHLAEY 505 VFYVQYA+AR SI R A+D+ + DFD L P+E E L+ LAE+ Sbjct: 396 VFYVQYAHARIASILRNAEDLGIAWSTGDFDPALLSH---PKEGE-------LLRALAEF 445 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 PRV+ A +EP+++A YL D+A V+H + + R P + QA + L RL LV A Sbjct: 446 PRVVAAAAELREPHRVARYLEDMAGVYHRFYDNCRVLP-MGDEQAGD--LHRARLVLVAA 502 Query: 566 VASIINSGLNIIGVESPNEM 585 +++ +GL+++GV +P M Sbjct: 503 TRTVLANGLDLVGVSAPERM 522 >gi|73748954|ref|YP_308193.1| arginyl-tRNA synthetase [Dehalococcoides sp. CBDB1] gi|109894987|sp|Q3ZYF0|SYR_DEHSC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|73660670|emb|CAI83277.1| arginyl-tRNA synthetase [Dehalococcoides sp. CBDB1] Length = 556 Score = 339 bits (869), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 195/555 (35%), Positives = 316/555 (56%), Gaps = 34/555 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I IE P+ +G +T+ + L++ G P+ +A+++ + I+ + V +A GFIN Sbjct: 35 ISIEHPQKTNYGDYATSLPLRLAKATGKRPMELAQILASYIETGSGISKVSVAPPGFINF 94 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 S +L ++ +I+ YG +G G++V IEFVSANPTGP+H+GH R AV+G TL+ Sbjct: 95 TFSKEWLCSLVKTILTEAGSYGNINMGGGSRVQIEFVSANPTGPIHIGHGRGAVLGSTLS 154 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ +GY V E+YINDAG+QI+ ++F RYQQAL D+ +P+ Y G Y+ + Sbjct: 155 NILKAAGYYVEEEFYINDAGSQIDAFKRTLFARYQQAL-GKDAAVPQDGYHGQYMVDLAA 213 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 E+ KY + L P + + + + M+ +I DDLKAL + DI+ SE + G Sbjct: 214 EMVTKYGDKYLQMPADIAQNDLGEIGMARMLCLISDDLKALKVDFDIWFSERSLYSG--G 271 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + +D L+ Y+ E + T F ST++GD D +++SDG+ Sbjct: 272 QYKTAMDILSGNNYIAE------RDNAT----------WFSSTLLGDSKDNVIVRSDGTP 315 Query: 332 TYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFA+D+AY K+ ER FD +I + G+DH G+V R++A+ +A+ ++ LL +++ Sbjct: 316 TYFASDIAYHYNKFIERKFDRVINIWGADHQGHVSRMKAMVSALGINPERLTTLLFQMIT 375 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L R G +++SKR G+ I+LR V++EVG+D+ RF L R +DFD K++S ENP Sbjct: 376 LKRGGELVRLSKRTGEIISLREVIEEVGADACRFFFLARSTESQMDFDLELAKKESAENP 435 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+YVQYA+AR SI A + LD+ + + + +EL+LI +AE P ++E Sbjct: 436 VYYVQYAHARICSILHLAAE--KQLDY-----STGDTDLLGEEAELELIRKMAELPEIVE 488 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 + EP+ L +Y +LA+ FH + R V ++N +LT RL+LV A ++ Sbjct: 489 TVSRTLEPHHLTYYAQELANAFHQFYKDCR-------VISDNAELTCARLKLVDASRIVL 541 Query: 571 NSGLNIIGVESPNEM 585 L+++G+ SP M Sbjct: 542 ARTLHLMGMTSPESM 556 >gi|329723123|gb|EGG59655.1| arginine--tRNA ligase [Staphylococcus epidermidis VCU144] Length = 553 Score = 338 bits (868), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 199/578 (34%), Positives = 308/578 (53%), Gaps = 43/578 (7%) Query: 15 LKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72 ++EI+ I+ D I IE P+D +G S+N AM+L++ +P IA+ IV + Sbjct: 12 IEEIEASIRKANLTEDIPEIKIEIPKDTKNGDYSSNIAMVLTKIAKRNPREIAQAIVDHL 71 Query: 73 KID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131 V V IAG GFIN YL YL I+ + G +G K T + +E+VSAN Sbjct: 72 DTSKAHVKQVDIAGPGFINFYLDNQYLTDIIPEAITKGDRFGYATQSKNTNILLEYVSAN 131 Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 PTG +H+GH R A VGD+LA+++ +GY VTREYYINDAG QI LA S+ RY +AL + Sbjct: 132 PTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLARSIEARYFEALGD 191 Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251 ++P Y G + +GK+LA K+ E+ ++ +E+ L + V M+ ++ DL Sbjct: 192 TSYEMPADGYNGKDIIEIGKDLAVKHP-EIKDYSDEERLKTFRQLGVDYEMEKLKKDLSD 250 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 N+ D + SE + I++ + + GY YE Sbjct: 251 FNVHFDNWFSETSLYEN--GAIKNTLSKMKELGYTYEA----------------DGATWL 292 Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371 R++ DD DR L+K DG+YTYF D AY K RG D +I +MG+DH GY+ RL+A Sbjct: 293 RTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGADHHGYINRLKASL 352 Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431 ++ + + ++VRL ++G +KMSKR G+ ITLR ++DEVG D+ R+ + R Sbjct: 353 ETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGIDAARYFLTMRSP 412 Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQ 487 DFD KEQS++NP++Y QYA+AR SI +QAK ++ D DF + Sbjct: 413 DSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEQGIEVSTDADFSKINND---- 468 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 + L+ +AE+ IE+A + P++L Y+ DLA+ FH ++ + Sbjct: 469 ------KAIDLLKKVAEFESTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAEK------- 515 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V ++ + T + ++ AV +++ L ++GV +P M Sbjct: 516 VLTDDTEKTKAHVAMIEAVRITLHNALALVGVTAPESM 553 >gi|27467298|ref|NP_763935.1| arginyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228] gi|251810035|ref|ZP_04824508.1| arginyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060] gi|282874930|ref|ZP_06283805.1| arginine--tRNA ligase [Staphylococcus epidermidis SK135] gi|38258364|sp|Q8CTN9|SYR_STAES RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|27314841|gb|AAO03977.1|AE016745_76 arginyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228] gi|251806379|gb|EES59036.1| arginyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060] gi|281296258|gb|EFA88777.1| arginine--tRNA ligase [Staphylococcus epidermidis SK135] Length = 553 Score = 338 bits (868), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 199/578 (34%), Positives = 308/578 (53%), Gaps = 43/578 (7%) Query: 15 LKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72 ++EI+ I+ D I IE P+D +G S+N AM+L++ +P IA+ IV + Sbjct: 12 IEEIEASIRKANLAEDIPEIKIEIPKDTKNGDYSSNIAMVLTKIAKRNPREIAQAIVDHL 71 Query: 73 KID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131 V V IAG GFIN YL YL I+ + G +G K T + +E+VSAN Sbjct: 72 DTSKAHVKQVDIAGPGFINFYLDNQYLTDIIPEAITKGDRFGYATQSKNTNILLEYVSAN 131 Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 PTG +H+GH R A VGD+LA+++ +GY VTREYYINDAG QI LA S+ RY +AL + Sbjct: 132 PTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLARSIEARYFEALGD 191 Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251 ++P Y G + +GK+LA K+ E+ ++ +E+ L + V M+ ++ DL Sbjct: 192 TSYEMPADGYNGKDIIEIGKDLAVKHP-EIKDYSDEERLKTFRQLGVDYEMEKLKKDLSD 250 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 N+ D + SE + I++ + + GY YE Sbjct: 251 FNVHFDNWFSETSLYEN--GAIKNTLSKMKELGYTYEA----------------DGATWL 292 Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371 R++ DD DR L+K DG+YTYF D AY K RG D +I +MG+DH GY+ RL+A Sbjct: 293 RTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGADHHGYINRLKASL 352 Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431 ++ + + ++VRL ++G +KMSKR G+ ITLR ++DEVG D+ R+ + R Sbjct: 353 ETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGIDAARYFLTMRSP 412 Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQ 487 DFD KEQS++NP++Y QYA+AR SI +QAK ++ D DF + Sbjct: 413 DSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEQGIEVSTDADFSKINND---- 468 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 + L+ +AE+ IE+A + P++L Y+ DLA+ FH ++ + Sbjct: 469 ------KAIDLLKKVAEFESTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAEK------- 515 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V ++ + T + ++ AV +++ L ++GV +P M Sbjct: 516 VLTDDTEKTKAHVAMIEAVRITLHNALALVGVTAPESM 553 >gi|147669721|ref|YP_001214539.1| arginyl-tRNA synthetase [Dehalococcoides sp. BAV1] gi|189083531|sp|A5FQ65|SYR_DEHSB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|146270669|gb|ABQ17661.1| arginyl-tRNA synthetase [Dehalococcoides sp. BAV1] Length = 556 Score = 338 bits (868), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 195/555 (35%), Positives = 316/555 (56%), Gaps = 34/555 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I IE P+ +G +T+ + L++ G P+ +A+++ + I+ + V +A GFIN Sbjct: 35 ISIEHPQKTNYGDYATSLPLRLAKATGKRPMELAQILASYIETGSGISKVSVAPPGFINF 94 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 S +L ++ +I+ YG +G G++V IEFVSANPTGP+H+GH R AV+G TL+ Sbjct: 95 TFSKEWLCSLVKTILTEAGSYGNINMGGGSRVQIEFVSANPTGPIHIGHGRGAVLGSTLS 154 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ +GY V E+YINDAG+QI+ ++F RYQQAL D+ +P+ Y G Y+ + Sbjct: 155 NILKAAGYYVEEEFYINDAGSQIDAFKRTLFARYQQAL-GKDAAVPQDGYHGQYMVDLAA 213 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 E+ KY + L P + + + + M+ +I DDLKAL + DI+ SE + G Sbjct: 214 EMVTKYGDKYLQMPADIAQNDLGEIGMARMLCLISDDLKALKVDFDIWFSERSLYSG--G 271 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + +D L+ Y+ E + T F ST++GD D +++SDG+ Sbjct: 272 QYKTAMDILSGNNYIAE------RDNAT----------WFSSTLLGDSKDNVIVRSDGTP 315 Query: 332 TYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFA+D+AY K+ ER FD +I + G+DH G+V R++A+ +A+ ++ LL +++ Sbjct: 316 TYFASDIAYHYNKFIERKFDRVINIWGADHQGHVSRMKAMVSALGINPERLTTLLFQMIT 375 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L R G +++SKR G+ I+LR V++EVG+D+ RF L R +DFD K++S ENP Sbjct: 376 LKRGGELVRLSKRTGEIISLREVIEEVGADACRFFFLARSTESQMDFDLELAKKESAENP 435 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+YVQYA+AR SI A++ LD+ + + +EL+LI +AE P ++E Sbjct: 436 VYYVQYAHARICSILHLAEE--KQLDY-----STGDTALLGEEAELELIRKMAELPEIVE 488 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 + EP+ L +Y +LA+ FH + R V ++N +LT RL+LV A ++ Sbjct: 489 TVSRTLEPHHLTYYAQELANAFHQFYKDCR-------VISDNAELTCARLKLVDASRIVL 541 Query: 571 NSGLNIIGVESPNEM 585 L+++G+ SP M Sbjct: 542 ARTLHLMGMTSPESM 556 >gi|290967899|ref|ZP_06559449.1| arginine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L] gi|290782038|gb|EFD94616.1| arginine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L] Length = 554 Score = 338 bits (868), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 208/556 (37%), Positives = 307/556 (55%), Gaps = 35/556 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 IV+E P G +TN AM +R P IAE IV +K P +D +AG GFIN+ Sbjct: 32 IVLEIPPQKEFGDFATNIAMQSARTAHCAPRHIAESIVEELKA-PWLDKAEVAGAGFINI 90 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +L ++L I+ YG V +EFVSANPTGP+HVGH R A G +L Sbjct: 91 FLDSRVFYQVLQHILTVQEAYGTCAERPEDTVQVEFVSANPTGPLHVGHGRGAAYGSSLV 150 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +L+ +GY+V EYYINDAG Q++ LA SV RY + L+ +++PE Y G + K Sbjct: 151 NLLRMAGYKVEAEYYINDAGKQMDNLAASVNARYLE-LFGRKAEIPENGYHGQDIIDTAK 209 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 +A + L E + L I KD + + +K ++ DL ++Q+D + SE H P Sbjct: 210 AIAAQDGDRYLQVSEAERLAIFKDRAYEEKLKALQKDLARFHVQYDHWFSERTLH---PQ 266 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 IR D L +G VYE L +ST GDD DR +++ +G Sbjct: 267 GIRQACDALRERGKVYE----------------KDGALWLQSTAYGDDKDRVVIRENGDP 310 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 TY AAD+AY K KY+R F MI + G+DH GYV R+ A AA+ ++ VLL ++V L Sbjct: 311 TYLAADIAYHKNKYDRHFKTMINIWGADHHGYVARVRAAMAALGYDTKRLEVLLLQMVSL 370 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 +RDG P+KMSKR G ITL +++EVG+D+ R+ + R LDFD S ENPV Sbjct: 371 FRDGKPVKMSKRTGQAITLNELIEEVGTDAARYFFIMRSLDTQLDFDLDLAMSHSNENPV 430 Query: 452 FYVQYAYARCRSIFRQAKDIFPDL--DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 +Y+QYA+AR SI+RQA++ L ++ +++ +E +EL LI +A +P I Sbjct: 431 YYIQYAHARIYSIYRQAEEAGIALPQRWEAVQWDLLQEE-----AELALIKKMAAFPEEI 485 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 + A A+ P+++A ++Y+ A +FH ++H R +Q +R+L + RL LV AV Sbjct: 486 QRAAAARAPHRIAHFVYETAGLFHAFYNH------CRIIQ-EDRELAIARLGLVTAVRFT 538 Query: 570 INSGLNIIGVESPNEM 585 I + L ++G+ +P +M Sbjct: 539 IANSLAVLGISAPQQM 554 >gi|82703571|ref|YP_413137.1| arginyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196] gi|82411636|gb|ABB75745.1| arginyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196] Length = 598 Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 206/610 (33%), Positives = 321/610 (52%), Gaps = 66/610 (10%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 DF S + L+ + + LD I RPR +HG S N AM L++PL P IA Sbjct: 25 DFKSHFTDILRNALNERGLADLNLD-IEFARPRQSSHGDYSCNLAMQLAKPLRQKPRDIA 83 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 + + P ++ V IAG GFINL+L+ S ++ ++ SG ++G + +G G K+ + Sbjct: 84 QSLATAFSASPYLEKVEIAGAGFINLFLTTSAKQQFSRYVLESGEKFGHSSMGAGEKIQV 143 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+HVGH R A G +LA+++A +GY VTREYYINDAG Q++ LALS + RY Sbjct: 144 EFVSANPTGPLHVGHGRGAAFGASLANVLAAAGYSVTREYYINDAGRQMDILALSTWLRY 203 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE------------------- 226 + L S P Y G Y++ + + + ++ ++ PE Sbjct: 204 LE-LNGVASAFPPNAYQGEYVRDMARLIHKAHAGRYVHEPELLFDRVAGAEADTEAALDG 262 Query: 227 -----EKWL----PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277 +K L + ++ + + R+DL + DI+ SE D + + Sbjct: 263 LIANAKKLLGQDYAYIHNFVLNEQLGDCRNDLMEFGVTFDIWFSEQSLF--DSGGVAQAV 320 Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337 L Y+Y+ D + FRS+ GD+ DR + + +G +TYFA+D Sbjct: 321 HLLEEGNYLYQ---------------QDGAKW-FRSSHFGDEKDRVVQRENGQFTYFASD 364 Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397 +AY K+ RGFD +I + G+DH GY+ R++ A++ ++ + L + LYRDG Sbjct: 365 IAYHLNKFSRGFDRVIDIWGADHHGYISRVKGAMQALALDPEKLEIALVQFAVLYRDGKK 424 Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457 + MS RAG+F+TLR + EVG+D+ RF + RK+ + LDFD K QS +NPV+YVQYA Sbjct: 425 VPMSTRAGEFVTLRELRQEVGTDAARFFYVLRKSDQHLDFDLDLAKSQSTDNPVYYVQYA 484 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT--SELQLIVHLAEYPRVIENATIA 515 +AR S+ Q + P ++ ++ T +EL L+ L +YP +E A Sbjct: 485 HARVCSVLEQWGED---------PGMLVTADTSALTGAAELSLLQKLIDYPETVEAAARE 535 Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575 P+ +AFYL +LA FH +++ RF+ + + RL LV AV ++N+GL Sbjct: 536 FSPHLIAFYLKELAGEFHSYYN------STRFL-VPEMTVRLARLALVAAVRQVLNNGLK 588 Query: 576 IIGVESPNEM 585 ++GV +P +M Sbjct: 589 LLGVSAPAKM 598 >gi|109895009|sp|Q2Y676|SYR_NITMU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS Length = 581 Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 206/610 (33%), Positives = 321/610 (52%), Gaps = 66/610 (10%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 DF S + L+ + + LD I RPR +HG S N AM L++PL P IA Sbjct: 8 DFKSHFTDILRNALNERGLADLNLD-IEFARPRQSSHGDYSCNLAMQLAKPLRQKPRDIA 66 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 + + P ++ V IAG GFINL+L+ S ++ ++ SG ++G + +G G K+ + Sbjct: 67 QSLATAFSASPYLEKVEIAGAGFINLFLTTSAKQQFSRYVLESGEKFGHSSMGAGEKIQV 126 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+HVGH R A G +LA+++A +GY VTREYYINDAG Q++ LALS + RY Sbjct: 127 EFVSANPTGPLHVGHGRGAAFGASLANVLAAAGYSVTREYYINDAGRQMDILALSTWLRY 186 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE------------------- 226 + L S P Y G Y++ + + + ++ ++ PE Sbjct: 187 LE-LNGVASAFPPNAYQGEYVRDMARLIHKAHAGRYVHEPELLFDRVAGAEADTEAALDG 245 Query: 227 -----EKWL----PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277 +K L + ++ + + R+DL + DI+ SE D + + Sbjct: 246 LIANAKKLLGQDYAYIHNFVLNEQLGDCRNDLMEFGVTFDIWFSEQSLF--DSGGVAQAV 303 Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337 L Y+Y+ D + FRS+ GD+ DR + + +G +TYFA+D Sbjct: 304 HLLEEGNYLYQ---------------QDGAKW-FRSSHFGDEKDRVVQRENGQFTYFASD 347 Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397 +AY K+ RGFD +I + G+DH GY+ R++ A++ ++ + L + LYRDG Sbjct: 348 IAYHLNKFSRGFDRVIDIWGADHHGYISRVKGAMQALALDPEKLEIALVQFAVLYRDGKK 407 Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457 + MS RAG+F+TLR + EVG+D+ RF + RK+ + LDFD K QS +NPV+YVQYA Sbjct: 408 VPMSTRAGEFVTLRELRQEVGTDAARFFYVLRKSDQHLDFDLDLAKSQSTDNPVYYVQYA 467 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT--SELQLIVHLAEYPRVIENATIA 515 +AR S+ Q + P ++ ++ T +EL L+ L +YP +E A Sbjct: 468 HARVCSVLEQWGED---------PGMLVTADTSALTGAAELSLLQKLIDYPETVEAAARE 518 Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575 P+ +AFYL +LA FH +++ RF+ + + RL LV AV ++N+GL Sbjct: 519 FSPHLIAFYLKELAGEFHSYYN------STRFL-VPEMTVRLARLALVAAVRQVLNNGLK 571 Query: 576 IIGVESPNEM 585 ++GV +P +M Sbjct: 572 LLGVSAPAKM 581 >gi|220933450|ref|YP_002512349.1| Arginine--tRNA ligase [Thioalkalivibrio sp. HL-EbGR7] gi|254782990|sp|B8GU79|SYR_THISH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|219994760|gb|ACL71362.1| Arginine--tRNA ligase [Thioalkalivibrio sp. HL-EbGR7] Length = 586 Score = 338 bits (866), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 208/591 (35%), Positives = 315/591 (53%), Gaps = 71/591 (12%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + + R +D AHG +TN A+ L++P P +AE IVAR+ V IAG GFINL Sbjct: 30 VQVTRTKDKAHGDFATNVALQLAKPARKKPRDVAEAIVARLPASGLVARTEIAGPGFINL 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +L ++++I G YGR+ +G G KV +EFVSANPTGP+HVGH R A G +A Sbjct: 90 FLGEQAKLSVIATIREQGERYGRSQLGAGKKVQVEFVSANPTGPLHVGHGRGAAYGAAVA 149 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG- 210 L+ G++V REYY+NDAG Q++ L SV+ RY + L + P Y G Y+ + Sbjct: 150 DLLEAVGFDVHREYYVNDAGRQMDILGTSVWLRYLE-LTGVELPFPTNAYRGDYVYDIAA 208 Query: 211 ---KELADKYSSE----LLNFP--------EEKWLP----------------IVKDYSVQ 239 +E D Y E L P +E+++ V + + Sbjct: 209 TLHREHGDHYKREAAEILDGLPPDEPDGGDKEEYIDAMIARAKELLGDNHYRFVFELGLN 268 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 ++ IRDDL + +D + SE D + I+ L G++YE Sbjct: 269 VILDDIRDDLAEFGVTYDTWYSERSL--TDKGAVNLAIERLREAGHLYE----------- 315 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 L FRST GD+ DR + + +G TYFA+D+AY K ERG+D +I V G+D Sbjct: 316 -----KDGALWFRSTDFGDEKDRVVQRDNGQTTYFASDIAYHMDKMERGYDRVIDVWGAD 370 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYV R++A A+ E + +++VLL + LYR G ++MS R+G F+TLR + +EVG Sbjct: 371 HHGYVPRVKAALKALGEDETRLDVLLVQFAILYRGGERVQMSTRSGSFVTLRELREEVGK 430 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ--AKDIFPDLDF 477 D+ RF + R+ + LDFD K QS +NPV+Y+QYA+AR S+ RQ AK + D Sbjct: 431 DAARFFYVMRRCEQHLDFDLDLAKSQSADNPVYYIQYAHARVCSVLRQMEAKGLKHDPSH 490 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 +++ + + E +++ LA +P VIE A + +EP+++A YL +LA+ FH +++ Sbjct: 491 GEAKLSLLTE-----SHEQEILATLARFPEVIEAAALVEEPHQIANYLRELANDFHTYYN 545 Query: 538 HGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + P +R RL L+ AV +I +GL ++GV +P EM Sbjct: 546 AHQFLVDEPAIRDA----------RLSLILAVRQVIANGLGLLGVSAPQEM 586 >gi|206901295|ref|YP_002251195.1| arginyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12] gi|206740398|gb|ACI19456.1| arginyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12] Length = 550 Score = 337 bits (865), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 202/556 (36%), Positives = 312/556 (56%), Gaps = 36/556 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I+IE P+ +G +T A+ +++ P +AE I+ ++ P + IAG GFIN Sbjct: 29 IIIETPKQKEYGDYATAVALQIAQKNKKPPRIVAEKILENLEKSPFIRKAEIAGPGFINF 88 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +L+ L + L ++ ++ ++ K K+ +EF S NPTGPMH+ H R +GD+LA Sbjct: 89 FLNDEALWETLR-LIRKDLDSFVSIPPKKKKIQLEFGSINPTGPMHIAHARGVTIGDSLA 147 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +L G+ V +E+YINDAG QI+ L S++ RY Q L D +P+ Y G YL + K Sbjct: 148 NLFRRIGWNVEKEFYINDAGNQIDLLGESLYARYMQ-LLGYDHPVPDEGYHGNYLIELAK 206 Query: 212 ELADKYSS-ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 EL ++ E +N E+K K+Y++ M++ I+ L +++D++ SE H Sbjct: 207 ELLNQKDQIEKMNETEKK--KFFKEYALSKMLEDIKTTLLDFGVEYDVWFSERTLHEN-- 262 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 +++++D L + GY YE + F ST GD+ DR L+KSDG Sbjct: 263 GKVKEVLDILVKNGYAYE----------------KDGAIWFLSTKFGDEKDRVLVKSDGK 306 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYF AD+AY K +RGFD +I V G+DH +V RL+ A+ K + ++L ++VR Sbjct: 307 PTYFLADIAYHLNKIQRGFDWIIDVWGADHHSHVTRLKGAIQALGYPKDILEIILVQMVR 366 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L + IKMSKR GDF+TL+ V +EVG D +RF L R LDFD K+QS ENP Sbjct: 367 LMKGNEEIKMSKRTGDFVTLKEVQEEVGKDPIRFFFLLRSPESQLDFDIELAKKQSVENP 426 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 V+YVQYA+ARC SI + A+ +L D D +++ +E E D LI++L YP + Sbjct: 427 VYYVQYAHARCCSILKNAEAKGYNLADLDQANLSLLKEEKEKD-----LILNLLRYPEKL 481 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 ++ T E ++L FYL +L+++FHG++ + V +R LT+ RL L+ + I Sbjct: 482 DDITRTLEIHQLPFYLLNLSTLFHGYYDSHK-------VITEDRDLTLARLVLIDCIRII 534 Query: 570 INSGLNIIGVESPNEM 585 I L+I+GV +P +M Sbjct: 535 IKDALSILGVSAPEKM 550 >gi|302038582|ref|YP_003798904.1| arginyl-tRNA synthetase [Candidatus Nitrospira defluvii] gi|300606646|emb|CBK42979.1| Arginyl-tRNA synthetase [Candidatus Nitrospira defluvii] Length = 584 Score = 337 bits (864), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 206/607 (33%), Positives = 320/607 (52%), Gaps = 62/607 (10%) Query: 8 SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 S L L+ + ++ + + I +E P+ G +S AM LS P IA++ Sbjct: 11 SQALVGALRSAQQRGMLKLEQMPTINLEAPKRPEWGDVSCTVAMSLSASERRPPFEIAQI 70 Query: 68 IVARIKIDPDVDSVF----IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 IV I+ D++F IA GF+NL + +L I G YG +L+G+G +V Sbjct: 71 IVDHIE---QRDALFSRAEIARPGFLNLTVKRELWMDVLREIEAQGERYGHSLVGRGRRV 127 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +E+VSANPTGP+HVGH R A VG L L+ +G++V EYYINDAG Q+ L LSV Sbjct: 128 LVEYVSANPTGPLHVGHGRGAAVGQALVRLLRATGHDVVSEYYINDAGRQMKLLGLSVLA 187 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 RY++A PE Y G Y++ V + + + LL+ P +D++ + ++ Sbjct: 188 RYREAC-GQPVSFPEDGYHGGYIRTVAEHVKAEQGVVLLSLPAADAEQRSRDFAYRELLA 246 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 +IR DL+ I + + SE + ++ L + ++ D Sbjct: 247 LIRQDLETFGIAFESWFSEASLL--SSGAVEQVLSELRARDLLF---------------D 289 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 + Q FRS+ GD+ DR + K +G YTY A+D+AY + K RGFD ++ V G+DH GY Sbjct: 290 QEGAQW-FRSSAFGDEKDRVVRKQEGDYTYLASDIAYHRDKLRRGFDLLVDVWGADHHGY 348 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + R++AV A K ++ V+L ++V L R G ++MSKR+G+FITLR V+DEVG+D+ + Sbjct: 349 IPRMQAVVQAYGYPKERLRVVLVQMVNLLRGGQKVEMSKRSGEFITLREVMDEVGADAAK 408 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 F L R +S LDFD K+QS+ENPV+YVQY +AR S+ R A R Sbjct: 409 FFFLMRDSSTHLDFDLELAKQQSQENPVYYVQYVHARIASLRRVAAS-----------RG 457 Query: 484 V---IPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 + +P +++ D EL LI L+ +P V++ + + EP+++A+YL +LA + H + Sbjct: 458 IACPLPSQADLNVLEDPDELALIRKLSAFPVVLQASAVELEPHRMAYYLRELAGMVHPFY 517 Query: 537 SHGR------------------ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 + R P R +A LT RL L+ AV ++ +GLN++G Sbjct: 518 NKHRILPPAPDSEAVTAASTEQVAPSARTAEAMTPGLTGARLALMWAVQQVVRNGLNVLG 577 Query: 579 VESPNEM 585 V +P +M Sbjct: 578 VSAPEQM 584 >gi|327399125|ref|YP_004339994.1| Arginyl-tRNA synthetase [Hippea maritima DSM 10411] gi|327181754|gb|AEA33935.1| Arginyl-tRNA synthetase [Hippea maritima DSM 10411] Length = 543 Score = 337 bits (864), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 206/556 (37%), Positives = 309/556 (55%), Gaps = 38/556 (6%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDV-DSVFIAGKGFIN 90 +E P++ G STN AMI++ L +P IAE V K PD+ + + IAG GF+N Sbjct: 23 TVEYPKEEKFGDYSTNMAMIMASKLKKNPKAIAEEFVEFAKQQKPDLFEKIEIAGPGFVN 82 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 Y++ + + + I + Y + I KV +EFVSANPTGP+HVGH R A +GD++ Sbjct: 83 FYINKNAFAEEIKRISENVNLYLKPKIDSTKKVQVEFVSANPTGPLHVGHGRGAAIGDSI 142 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A +++F GYEV +EYYINDAG Q++ L LS F RY+Q L + LPE Y G YL V Sbjct: 143 ARILSFCGYEVEKEYYINDAGLQMHLLGLSTFIRYKQ-LLGIEETLPEDGYKGEYLIEVA 201 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K+L +Y LLN E + + I + + ++K I + LK ++ D +E + D Sbjct: 202 KKLIVEYGETLLNKKESEAVEICMQKAAKDILKDIMETLKDFRVEFDKVFNEKKLY--DS 259 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + + + L + +YE L F+ST GDD DR L +S+G Sbjct: 260 NEVEQSLSLLKEKNAIYE----------------KDGALWFKSTGFGDDKDRVLKRSNGV 303 Query: 331 YTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 +TYFA+D+AY + K+ +RGF +I V GSDH GYVKR++A A+ ++ V+L ++V Sbjct: 304 FTYFASDVAYHRNKFLKRGFSEVIDVWGSDHHGYVKRVKAAIQAMGIDPNRLKVVLVQIV 363 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 L R+G + MS R +F+ L+ VV EVG D+ RFM + R LDFD K+QS EN Sbjct: 364 NLLRNGQKVSMSTRRAEFVELKDVVKEVGVDAARFMFVSRSVDSHLDFDLELAKKQSSEN 423 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 PV+YVQYA+AR SI Q + ++D + P + +E E++LI + ++ ++ Sbjct: 424 PVYYVQYAHARINSILEQ---LNSEIDLNADPSCLKEKE------EIELIKSVIKFKELL 474 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 E A + EPY + L ++A H ++ R V +N +L R+ LV V I Sbjct: 475 EKAFLETEPYFIVKGLLEVAEKLHRFYNKHR-------VIIDNEELKKARVLLVWVVKEI 527 Query: 570 INSGLNIIGVESPNEM 585 + GL++IGVE+ N+M Sbjct: 528 LKIGLSLIGVEAKNKM 543 >gi|295111752|emb|CBL28502.1| arginyl-tRNA synthetase [Synergistetes bacterium SGP1] Length = 572 Score = 337 bits (863), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 199/558 (35%), Positives = 304/558 (54%), Gaps = 33/558 (5%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD--VDSVFIAGKGFINL 91 +ERPR G ++N AM L+R + P IA I ++ +D V +AG GFINL Sbjct: 42 LERPRRADQGDRASNVAMQLARAFSMPPRDIAARIAGSLQEGCQDLLDRVEVAGPGFINL 101 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +LS + + S ++ G YG +G+G +V +EFVSANPTGP+H+GH R A VGD +A Sbjct: 102 FLSHRWFAEAASQVLQQGERYGAVDLGQGRRVQVEFVSANPTGPLHIGHGRGAAVGDAVA 161 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND-SDLPEGYYPGVYLKHVG 210 +++F+G+ V REYY+NDAG QI TL S RY + ++ + LPE Y G YL + Sbjct: 162 RILSFTGWNVEREYYLNDAGLQIETLGRSTQARYFEVCGRSELAPLPEDGYKGDYLLDLA 221 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 + + + L P + LP + Y+ +++ IR+DL+ + D + SE + D Sbjct: 222 ERIRKEEGDRFLATPLAESLPWFERYAADHILEGIREDLERFGVLFDSWFSEASLYERDL 281 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + +++L ++GY +E L F+ST DD DR L++S+G Sbjct: 282 --VSHAMEDLKKRGYAFE----------------SNGALWFKSTAFADDKDRVLIRSNGV 323 Query: 331 YTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 TYFA+D+AY K+ RGFD +I V G+DH GYV R++A A+ LL +LV Sbjct: 324 PTYFASDVAYHHDKFVRRGFDRVIDVWGADHHGYVPRMKAAVEAMGRAPDDFKALLIQLV 383 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 L RDG + MS RAG+F+TLR V+DEVG D+ RF L R++ LDFD K+QS +N Sbjct: 384 ALKRDGKIVSMSTRAGEFVTLRSVLDEVGVDATRFFFLMRRSDSQLDFDLDLAKKQSSDN 443 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP-QESEFDTSELQLIVH-LAEYPR 507 PV+Y+QYA+AR S+ R+ + D+ R+ P + FD E + + LA +P Sbjct: 444 PVYYLQYAHARISSLLREWEGRGGDV--AALRRDGTPLPDLLFDNREARALAETLATFPV 501 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 + A+ P+ + Y +LA FH ++ R + + ++ RL+L AV Sbjct: 502 EMAGASADLAPHVVTAYALNLAGAFHSFYNTNR-------ILGESTEVERGRLRLAEAVR 554 Query: 568 SIINSGLNIIGVESPNEM 585 ++ + L ++GV +P M Sbjct: 555 IVLATCLGLLGVSAPERM 572 >gi|284032952|ref|YP_003382883.1| arginyl-tRNA synthetase [Kribbella flavida DSM 17836] gi|283812245|gb|ADB34084.1| arginyl-tRNA synthetase [Kribbella flavida DSM 17836] Length = 552 Score = 337 bits (863), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 203/571 (35%), Positives = 313/571 (54%), Gaps = 42/571 (7%) Query: 19 DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV 78 D I V+ + + +ERP++ HG +TN AM L + GL+P AEL+ A++ D + Sbjct: 20 DGTITVDGGLPRELKVERPKNPEHGDYATNVAMQLGKRSGLNPRRFAELLAAKLDSDDAI 79 Query: 79 DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138 +V IAG GFINL ++ KI +IV +G YG + +G +N+EF+SANPTGP+H+ Sbjct: 80 TAVEIAGPGFINLRVAADAQGKIAQAIVDAGPAYGSSDSLQGQAINLEFISANPTGPLHL 139 Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198 GH R A VGD LA ++A +G VTRE+Y+ND GAQ++ S+ Q +PE Sbjct: 140 GHTRWAAVGDALARVLAKAGAVVTREFYVNDRGAQMDKFGASLKAAAQ------GQPIPE 193 Query: 199 GYYPGVYLKHVGKELADKYSSE---LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255 Y G Y+ ELA++ +E + P+ + ++ + +K + L+ + Sbjct: 194 DGYHGAYI----LELAERIVAEVPGITELPDAEQTVAFREAGYERQLKEQQAQLEHFRTK 249 Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315 D++ SE H D + I+ L QG++Y+ D L R+T Sbjct: 250 FDVWYSERSLHEQD--GVGHAIEKLRGQGHLYD----------------DDGALWMRTTD 291 Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA-AV 374 DD DR L++S+G TYFA+D AY+ K ERGF+ IY++G+DH GYV RL+A+AA A Sbjct: 292 FTDDKDRVLIRSNGEPTYFASDAAYYVNKRERGFEVAIYLLGADHHGYVNRLKAIAACAG 351 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434 + + I +L+ +LV++ + G +K+SKRAG +TL +V+E G D +R+ + Sbjct: 352 DDPEHNIEILIGQLVKILKGGEEMKLSKRAGTIVTLAELVEEGGVDPLRYTLCRYPVDSP 411 Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494 L D ++ Q ENPV+YVQYA+AR SI R A D+ + D F ++ + E D Sbjct: 412 LTLDIEEMTRQVSENPVYYVQYAHARLASILRNADDL--GIKLDEFDPGLLSHDREGD-- 467 Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554 L+ LAE+PR++ A +EP+++A YL D AS FH + R PR Sbjct: 468 ---LLRALAEFPRIVATAAELREPHRIARYLEDTASAFHKFYDSCRVLPR---GDEEVEP 521 Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL LV A +++ +GL+++GV +P M Sbjct: 522 VHKARLTLVGATRTVLANGLDLLGVSAPERM 552 >gi|325982011|ref|YP_004294413.1| arginyl-tRNA synthetase [Nitrosomonas sp. AL212] gi|325531530|gb|ADZ26251.1| arginyl-tRNA synthetase [Nitrosomonas sp. AL212] Length = 586 Score = 337 bits (863), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 202/622 (32%), Positives = 326/622 (52%), Gaps = 81/622 (13%) Query: 4 FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 F +F + +K+ I + + + R + +HG S N AM L++PL +P Sbjct: 6 FPNFKTHFIKLIKKASSAITSLETAAISVELTRTKQASHGDYSCNLAMQLAKPLHKNPRE 65 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 IA+L++ + P ++ V +AG GFINLYL S ++ L I+ S +G + G+G K+ Sbjct: 66 IAQLLINALPPSPYLEKVEVAGAGFINLYLKNSAKQQFLHLILRSKNTFGNSTFGQGRKI 125 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EFVSANPTGP+HVGH R A +G +L++++A +G++V+RE+Y+NDAG Q++ L LS + Sbjct: 126 QVEFVSANPTGPLHVGHGRGAAIGASLSNILAAAGFDVSREFYVNDAGRQMDILTLSTWL 185 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE----------------- 226 RY + L + P Y G Y++ + + + ++ ++ PE Sbjct: 186 RYLE-LNHIHVPFPHNAYQGEYVRTMAQLIFQAHAQRYVHQPELLLDSLPEAVRATAVNT 244 Query: 227 ----EKWLPIVK-----DYS------VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 +K + K DY+ + + R+DL ++ D + SE + D Sbjct: 245 DEQLDKLIANTKKILGEDYTYIHNLVLTEQLGDCRNDLMEFGVEFDTWFSEQSLY--DNG 302 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + ID LA++ ++Y+ + FRST GD+ DR + + +G + Sbjct: 303 LVAHTIDLLAKKHHLYQ----------------QDGAIWFRSTDFGDEKDRVVQRENGQF 346 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 TYFA+D+AY K+ERGFD +I + G+DH GY+ R++ A+ ++ + L + L Sbjct: 347 TYFASDIAYHLNKFERGFDQVINIWGADHHGYIPRVKGALQALELDAERLQIALVQFAVL 406 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 YRDG MS R+G+F+TLR + EVG D+ RF + RK+ + LDFD K QS ENPV Sbjct: 407 YRDGKKAPMSTRSGEFVTLRELRQEVGKDAARFFYVMRKSDQHLDFDMDLAKSQSNENPV 466 Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT----SELQLIVHLAEYPR 507 +YVQYA+AR S+ Q + DL QE D +EL L+ L ++P Sbjct: 467 YYVQYAHARVCSVLTQWEGNIDDL-----------QEVNVDALSSPAELALLQKLIDFPD 515 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGR----ENPRLRFVQANNRKLTMMRLQLV 563 IE A P+ +AFYL +LAS FH +++ R E P L RL L+ Sbjct: 516 TIEIAAKESSPHLIAFYLRELASEFHSYYNSTRFLVPEIP-----------LQHARLALI 564 Query: 564 HAVASIINSGLNIIGVESPNEM 585 ++ ++++GL ++GV +P++M Sbjct: 565 ASIRQVLHNGLTLLGVSAPDKM 586 >gi|260881528|ref|ZP_05404644.2| arginine--tRNA ligase [Mitsuokella multacida DSM 20544] gi|260848689|gb|EEX68696.1| arginine--tRNA ligase [Mitsuokella multacida DSM 20544] Length = 546 Score = 336 bits (862), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 204/557 (36%), Positives = 296/557 (53%), Gaps = 34/557 (6%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 L ++++E P G +TN AM +R +P IAE + RI+ D +D IAG GF Sbjct: 24 LPQVILEVPPQKEFGDFATNFAMQSARVFHRNPRQIAEELAKRIEGDW-LDHTQIAGPGF 82 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 +N YL + L I+ +G +G K+ +E+VSANPTG +HVGH R A G Sbjct: 83 LNFYLKGNVLYDSFQKILEAGEAFGNLPKLDHPKIQVEYVSANPTGLLHVGHGRGAAAGS 142 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 L +L+ +GY V EYYINDAG Q+N LA SV RY + L + PE Y G + Sbjct: 143 ALVNLLRAAGYPVESEYYINDAGNQMNNLARSVNARYLE-LLGKEVTFPEDGYHGQDIID 201 Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 + + D+ + L EE+ L I KD + + I+++DL+ ++ D + SE H Sbjct: 202 TAQRIIDRDGDKYLALSEEERLAIFKDLAYHEKLAILKEDLERFHVTFDNWFSERTLH-- 259 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 P +R +++ L +G +YE L +ST GDD DR +++ + Sbjct: 260 -PDAVRKVVEILKEKGDIYE----------------KEGALWLKSTAYGDDKDRVVIRDN 302 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 G TY AAD+AY KYERGFD +I + G+DH GYV R++A A+ ++ VLL ++ Sbjct: 303 GVPTYLAADIAYHHNKYERGFDRLINIWGADHHGYVCRVKAAMQALGHDPEKLTVLLLQM 362 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V LYR G +KMSKR G +TL +++EVG+D+ R+ L R LDFD K++S + Sbjct: 363 VSLYRGGELVKMSKRTGQSVTLNELMEEVGTDAARYFFLMRSLDSQLDFDLDLAKKKSND 422 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 NPV+Y+QYA+AR SIFRQA++ L P E D SE+ LI + EYP Sbjct: 423 NPVYYIQYAHARICSIFRQAEET--KLALGEAPH----LELLTDESEVALIKKIEEYPEE 476 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 + A P ++A Y YDLA++FH ++ R + + L RL LV A Sbjct: 477 VAKAAADYAPQRIARYSYDLAALFHSFYNKCR-------IMGVDHDLAEARLALVTVTAH 529 Query: 569 IINSGLNIIGVESPNEM 585 +I L I+GV +P M Sbjct: 530 VIRHSLGILGVSAPEHM 546 >gi|117927836|ref|YP_872387.1| arginyl-tRNA synthetase [Acidothermus cellulolyticus 11B] gi|117648299|gb|ABK52401.1| arginyl-tRNA synthetase [Acidothermus cellulolyticus 11B] Length = 562 Score = 336 bits (862), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 196/582 (33%), Positives = 314/582 (53%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 AD + ++ ++ ++ + +++ERP+ G +TN A+ L++ G P + Sbjct: 16 ADLADAIRRAIRAAVDADQLRVDVPAEVLVERPKRKEFGDYATNVALQLAKSAGRPPRDV 75 Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 A ++ ++ P + +V +AG GF+N+ L+ I IV +G YG + +G ++N Sbjct: 76 AAILAEQLAAQPGIAAVDVAGPGFLNIRLAAGAQGDIARQIVEAGPRYGTSTTLRGQRIN 135 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGP+H+GH R A VGD LA ++ +G EVTRE+YIND GAQ+ S+ Sbjct: 136 VEFVSANPTGPLHLGHTRWAAVGDALARVLQAAGAEVTREFYINDRGAQMEKFGASL--- 192 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 A +P+ Y G Y+ + KE+A ++ E L+ P ++ +D + ++ Sbjct: 193 ---AAAAVGEPIPDDGYHGRYIHDLAKEIAGEH-PEFLDLPPDERAAAFRDEGYRRQLER 248 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 R L+ + D++ SE H + + +D L RQG+VYE Sbjct: 249 QRRALEHFRVHFDVWFSERVLH--ESGAVEAALDELRRQGHVYEA--------------- 291 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 + R+T GDD DR L++S+G TYFAAD AY+ K RGFD +Y++G+DH GYV Sbjct: 292 -DGAVWLRTTDFGDDRDRVLVRSNGEKTYFAADAAYYLDKRRRGFDTCLYLLGADHHGYV 350 Query: 365 KRLEAVAA-AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 RL+A+AA A + + + VL+ +LV++ + G +++SKRAG+ +TL VVD G D+VR Sbjct: 351 ARLKAIAACAGDDPERTLEVLIGQLVKILKGGEEVRLSKRAGEIVTLEDVVDLAGVDAVR 410 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + + L D + Q+ +NPVFYVQY AR S+ R A+D+ +D F Sbjct: 411 YSLARYPADSPLTLDVDLITRQTNDNPVFYVQYVAARTASVSRHARDL--GIDRGAFDPT 468 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ + E D L+ LAE+PR++ +A +EP+++A YL +LA +H + R P Sbjct: 469 LLGHDREID-----LLGALAEFPRIVASAAELREPHRIARYLEELAGTYHRFYDACRILP 523 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LT RL L A +I +GL ++GVE+P M Sbjct: 524 ---VGDEQPTPLTHARLWLNDATRIVIANGLELLGVEAPERM 562 >gi|257056971|ref|YP_003134803.1| arginyl-tRNA synthetase [Saccharomonospora viridis DSM 43017] gi|256586843|gb|ACU97976.1| arginyl-tRNA synthetase [Saccharomonospora viridis DSM 43017] Length = 551 Score = 336 bits (862), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 197/556 (35%), Positives = 298/556 (53%), Gaps = 34/556 (6%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 +++ +ERPR+ HG +TN A+ +++ GL P AE + I P + S +AG GF+ Sbjct: 30 EQVTVERPRNPEHGDYATNLALQVAKKAGLQPREFAEALAEVISSAPGIASAEVAGPGFL 89 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 NL L+ +I+ ++ +G +YGR G K+N+EFVSANPTGP+H+G R A VGD Sbjct: 90 NLRLAADAQGEIVRQVLDAGADYGRGDSLVGQKINLEFVSANPTGPIHLGGTRWAAVGDA 149 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 L L+A G EVTREYYINDAGAQI+ A S+ + PE Y G Y+ + Sbjct: 150 LGRLLAAQGAEVTREYYINDAGAQIDRFAESLLAAAE------GRPTPEDGYAGAYITDI 203 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 E+ + E+L+ P+E+ K V+ M++ I+ L D++ SE H Sbjct: 204 AAEIL-RREPEVLSLPDEERFATFKRLGVELMLEEIKQSLSDFGTHFDVWFSEKSLHTS- 261 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + I+ +L G +Y+ RST GDD DR ++KSDG Sbjct: 262 -GELESILADLKESGSLYQ----------------KDGAWWLRSTEHGDDKDRVVIKSDG 304 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 + Y A D+AY + K +RGFD +Y++G+DH GY+ RL+A AAA+ + VL+ +LV Sbjct: 305 TLAYIAGDVAYLRNKLDRGFDLCVYMLGADHHGYIARLKAAAAAMGHSPDTVEVLIGQLV 364 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 L G P++MSKRAG +T+ +V+ VG D+ R+ + LD D +++++ EN Sbjct: 365 NLVSGGKPVRMSKRAGTVVTMEDLVEAVGVDAARYELCRYSVDASLDIDLDLLRKRTNEN 424 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 PVFYVQYA+AR S+ R A ++ +L PR+ E LI + E+P V+ Sbjct: 425 PVFYVQYAHARLASLQRNAAEL------NLEPRSDADVSLLTHPREGDLIRTIGEFPSVL 478 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 A +EP+++A YL LAS +H + R P+ LT RL L A + Sbjct: 479 RTAAELREPHRVARYLESLASAYHKFYDVARVLPQ---GDEEPTPLTYARLALCEATRQV 535 Query: 570 INSGLNIIGVESPNEM 585 + +GL+++GV +P M Sbjct: 536 LANGLSLLGVSAPERM 551 >gi|319400084|gb|EFV88320.1| arginyl-tRNA synthetase [Staphylococcus epidermidis FRI909] Length = 553 Score = 336 bits (861), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 199/578 (34%), Positives = 308/578 (53%), Gaps = 43/578 (7%) Query: 15 LKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72 ++EI+ I+ D I IE P+D +G S+N AM+L++ +P IA+ IV + Sbjct: 12 IEEIEVSIRKANLAEDIPEIKIEIPKDPKNGDYSSNIAMVLTKIAKRNPREIAQAIVDHL 71 Query: 73 KID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131 V V IAG GFIN YL YL I+ + G +G K T + +E+VSAN Sbjct: 72 DTSKAHVKQVDIAGPGFINFYLDNQYLTDIIPEAITKGDRFGYATQSKNTNILLEYVSAN 131 Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 PTG +H+GH R A VGD+LA+++ +GY VTREYYINDAG QI LA S+ RY +AL + Sbjct: 132 PTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLARSIEARYFEALGD 191 Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251 ++P Y G + +GK+LA K+ E+ ++ +E+ L + V M+ ++ DL Sbjct: 192 TSYEMPADGYNGKDIIEIGKDLAVKHP-EIKDYTDEERLKTFRQLGVDYEMEKLKKDLSD 250 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 N+ D + SE + I++ + + GY YE Sbjct: 251 FNVHFDNWFSETSLYEN--GAIKNTLSKMKELGYTYEA----------------DGATWL 292 Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371 R++ DD DR L+K DG+YTYF D AY K RG D +I +MG+DH GY+ RL+A Sbjct: 293 RTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGADHHGYINRLKASL 352 Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431 ++ + + ++VRL ++G +KMSKR G+ ITLR ++DEVG D+ R+ + R Sbjct: 353 ETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGIDAARYFLTMRSP 412 Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQ 487 DFD KEQS++NP++Y QYA+AR SI +QAK ++ D DF + Sbjct: 413 DSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEQGIEVSTDADFSKINND---- 468 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 + L+ +AE+ IE+A + P++L Y+ DLA+ FH ++ + Sbjct: 469 ------KAIDLLKKVAEFESTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAEK------- 515 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V ++ + T + ++ AV +++ L ++GV +P M Sbjct: 516 VLTDDTEKTKAYVAMIEAVRITLHNALALVGVTAPESM 553 >gi|111225301|ref|YP_716095.1| arginyl-tRNA synthetase [Frankia alni ACN14a] gi|123142636|sp|Q0RD93|SYR_FRAAA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|111152833|emb|CAJ64578.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) [Frankia alni ACN14a] Length = 552 Score = 335 bits (860), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 204/562 (36%), Positives = 300/562 (53%), Gaps = 54/562 (9%) Query: 35 ERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS 94 ERP+ HG ++ A+ L++ P +AE++ R+ + SV IAG GF+N L+ Sbjct: 34 ERPKTAGHGDYASPVALQLAKAARRKPREVAEVLAGRLATQSGIASVDIAGPGFLNFTLA 93 Query: 95 PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154 L +I ++V +G YG +G +VN+EFVSANPTGP+ + R A VGD LA ++ Sbjct: 94 GDALGEIARTVVRAGESYGHAAKPRGVRVNLEFVSANPTGPVTLASARWAAVGDALARIL 153 Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE-L 213 +G+ V EYY+NDAG QI SV ++P Y G Y+ + L Sbjct: 154 TAAGFSVGGEYYVNDAGVQIERFGASVL------AAAAGREIPAEGYHGAYVAEIAAAVL 207 Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273 A + +LL+ PE+ L + + + M+ IR L+ + D + SE H + Sbjct: 208 AGR--PDLLDLPEDAALAVTTEEGLALMLTEIRSTLEGFGVHFDRWASERALH--TAGAL 263 Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333 ID+L QG+VY D D + R+T GDD DRPL+KSDG TY Sbjct: 264 TKAIDDLRAQGHVY---------------DAD-GAVWLRTTDFGDDKDRPLVKSDGQPTY 307 Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLY 392 F AD AY++ K RGFD +IY++G+DH GYV RL+A++A + A ++V++ +LV L Sbjct: 308 FCADAAYYRDKRGRGFDQLIYLLGADHHGYVARLKAISACFGDDPATNLDVIIGQLVTLS 367 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 R G P+KMSKRAG F+TL +VD VG D+ R+ ++ LD D V Q+ +NPVF Sbjct: 368 RGGAPVKMSKRAGTFLTLHDLVDAVGVDAARYSLVRSSLDSSLDLDLDLVTRQTSDNPVF 427 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH---------LA 503 YVQYA+AR S+ R A+ + +P SE T+++ L+ H L Sbjct: 428 YVQYAHARISSLLRNAEALG------------LPTASE--TADVALLTHPREVDLLRGLG 473 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 E+PRVIE A + P+++A YL +LA V+H + R P+ LT RL LV Sbjct: 474 EFPRVIEAAASLRGPHRVARYLEELAGVYHRFYDACRVLPQ---GDEEAGPLTGARLLLV 530 Query: 564 HAVASIINSGLNIIGVESPNEM 585 A ++ +GL ++GV +P M Sbjct: 531 AATRVVLANGLGLLGVSAPERM 552 >gi|329121651|ref|ZP_08250271.1| arginine--tRNA ligase [Dialister micraerophilus DSM 19965] gi|327468511|gb|EGF13991.1| arginine--tRNA ligase [Dialister micraerophilus DSM 19965] Length = 554 Score = 335 bits (860), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 194/549 (35%), Positives = 295/549 (53%), Gaps = 44/549 (8%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G S+NAAM +R + P IAE++V I V IAG GFIN +L+ + L Sbjct: 44 GDYSSNAAMQWARVAHMAPRKIAEILVEHID-SSLVSKTDIAGAGFINFFLAKDTVYAEL 102 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 I+ G YG V +E+VSANPTGP+H+GH R A G + +L+ +GY+V Sbjct: 103 KKILAKGENYGDLPRNDEEAVLVEYVSANPTGPLHIGHARGAAYGSAMVNLLRSAGYKVL 162 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222 EYYINDAG QI+ LALSV RY Q L D+ LPE Y G + + + D+ ++ L Sbjct: 163 SEYYINDAGNQIDNLALSVNARYLQ-LLGKDAQLPENGYHGHDIIETAQSILDRDGTKYL 221 Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282 EEK + + K+ +++ + ++ DL N++ D+++SE F+ P + +++D L + Sbjct: 222 EMDEEKRIEVFKEVALKEKLAALKKDLSDFNVEFDVWMSERSFY---PDQVNEVLDILKK 278 Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342 G +YE +T GDD DR +++S+G TYF +D+AY K Sbjct: 279 NGTLYE----------------KEDAWWLNTTKDGDDKDRVVIRSNGEPTYFCSDIAYVK 322 Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402 K ERG+ +I + G+DH GY+ R+++ ++ +++L ++V L RDG P+KMSK Sbjct: 323 NKIERGYHKLIDIWGADHHGYIARVKSAMTSLGYNADDFDIMLLQMVTLLRDGKPVKMSK 382 Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462 R G +TLR ++DEVG D R+ R +DFD K++S ENPV+Y+QYA AR Sbjct: 383 RTGQSVTLRELMDEVGVDVARYFFCSRTLDSQMDFDIDLAKKRSSENPVYYIQYANARVH 442 Query: 463 SIFRQAKD------IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 S+F+QAK+ + D+DF + D SEL LI + Y ++ A + Sbjct: 443 SLFKQAKENGVKIPSWEDVDFTVL----------VDESELDLIKKMEVYHGFLKGAAAER 492 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 P ++A Y Y+LA++FH + R + KL RL L+ AV ++ L I Sbjct: 493 APQRIATYAYELAALFHHFYRKCR-------ILGEEEKLMQARLGLIRAVGYVLVHALGI 545 Query: 577 IGVESPNEM 585 +GV +P EM Sbjct: 546 LGVSAPEEM 554 >gi|285017188|ref|YP_003374899.1| arginyl-tRNA synthetase (arginine--tRNA ligase) protein [Xanthomonas albilineans GPE PC73] gi|283472406|emb|CBA14911.1| probable arginyl-trna synthetase (arginine--trna ligase) protein [Xanthomonas albilineans] Length = 562 Score = 335 bits (860), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 202/567 (35%), Positives = 310/567 (54%), Gaps = 48/567 (8%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 V+ERP+ HG ++NAAM+L++ +P +A+ +V + + D+ V IAG GFIN Sbjct: 31 FVVERPKTREHGDFASNAAMLLAKAARTNPRALAQQLVDALPANDDIRKVEIAGPGFINF 90 Query: 92 YLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +L P +Y R++L+ ++ G +YGR+L+G G V +E+VSANPTGP+HVGH R A +GD L Sbjct: 91 HLGPGAYQREVLT-VLKQGHDYGRSLVGNGRTVGVEYVSANPTGPLHVGHGRAAAIGDCL 149 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A L+ +G+ RE+Y ND G QI LA SV R + D PE Y G Y++ V Sbjct: 150 ARLLEANGWNARREFYYNDGGGQIENLARSVQAR-AHGKTPDSHDWPEEGYRGDYIQDV- 207 Query: 211 KELADKY-SSELLNF--------PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 AD Y + +N + L ++ ++V + DL A + DI+ Sbjct: 208 ---ADAYMTGATVNLEGHLVKGAKDPNDLEAIRRFAVAYLRNEQNHDLAAFGVDFDIYFL 264 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E +R + + + L G+ YE + L +ST GDD D Sbjct: 265 ESSLYR--DGKVEEAVQKLIASGHTYE----------------EGGALWLKSTDFGDDKD 306 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKA 379 R + KSDG+YTYF D+AY K++RG+ I +G+DH G + R+ A A + K Sbjct: 307 RVMRKSDGTYTYFVPDVAYHLSKWQRGYVRAITELGADHHGSLARVRAGLQAMDLGIPKG 366 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439 +L ++V + R G +K+SKRAG ++TLR +++E G D+ R+ ++ RK L FD Sbjct: 367 WPEYVLHQMVTVMRGGEEVKLSKRAGSYLTLRDLIEEAGRDATRWFLIARKPDSQLTFDI 426 Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF-DTSELQL 498 ++QS +NPVFYVQYA+AR S+ RQA++ D D P + + Q + DT+ L+L Sbjct: 427 DLARQQSNDNPVFYVQYAHARVCSLLRQAQEKQRDYD----PADGMSQLNRLNDTTSLEL 482 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 ++ L+ YP V+ENA EP+ +A YL +LA+ FH W HG V ++ Sbjct: 483 MMELSRYPEVVENAGHVLEPHLIAQYLRELATAFH-TWYHGTP------VLVDDASERNA 535 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 +L L A ++ +GLN++GV +P +M Sbjct: 536 KLALAVAAQQVLANGLNLLGVCAPEKM 562 >gi|330469870|ref|YP_004407613.1| arginyl-tRNA synthetase [Verrucosispora maris AB-18-032] gi|328812841|gb|AEB47013.1| arginyl-tRNA synthetase [Verrucosispora maris AB-18-032] Length = 554 Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 193/558 (34%), Positives = 304/558 (54%), Gaps = 35/558 (6%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 ++ +ERPR+ HG ++ A+ LS+ +G+ P +A + A++ P + SV IAG GF+ Sbjct: 30 EQTTVERPRNPDHGDYASTLALQLSKKVGVPPRELAGDLAAKLGSTPGIKSVEIAGPGFL 89 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N+ L + ++ +IV +G EYGR + G K+N+EFVSANPTGP+H+G R A VGD Sbjct: 90 NIRLDAAAAGQLARTIVTAGEEYGRGDVLAGLKINLEFVSANPTGPVHIGGVRWAAVGDA 149 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 L+ L+ +G +V EYY NDAG+QI+ A S+ + PE Y G Y+ + Sbjct: 150 LSRLLRAAGADVGTEYYFNDAGSQIDRFARSLLAAAKG------EPAPEDGYGGAYIAEI 203 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 E+ + E+L+ E+ + + V+ M I+ L+ ++ D + +E D H D Sbjct: 204 ANEVTAR-RPEVLSLDEDAAQEVFRVEGVELMFAEIKSSLRDFGVEFDTYFNEKDLH--D 260 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + ++ L QG+++E R+T GDD DR L KS+G Sbjct: 261 RGELEHALNRLREQGHIFEA----------------DGATWLRTTDFGDDKDRVLRKSNG 304 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCEL 388 +TYFAAD AY+ K ERGFD ++ ++G+DH GY+ R++A++A + AQ + +L+ +L Sbjct: 305 EWTYFAADCAYYLDKRERGFDRVVIMLGADHHGYIGRMKAMSACFGDDPAQNLEILIGQL 364 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V L RDG P++MSKRAG ITL +VD +G D+ R+ + + +D D +++ Sbjct: 365 VNLVRDGAPVRMSKRAGTVITLEDLVDAIGVDASRYALARYSSDSPIDIDIELWTRATRD 424 Query: 449 NPVFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 NPV+YVQY AR S+ R A ++ D D F ++ + E +L+ LAE+P Sbjct: 425 NPVYYVQYVAARTASVGRNAAEVGLTRGDVDAFRPELLDHDKEN-----ELLKALAEFPA 479 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 V+ A +EP+++A YL DLA +H + + R PR L RL L A Sbjct: 480 VVAAAAELREPHRVARYLEDLAGAYHRFYDNCRILPR---GDEEVTDLHRARLWLNDATR 536 Query: 568 SIINSGLNIIGVESPNEM 585 +I +GL ++GV +P M Sbjct: 537 VVIANGLRLLGVSAPERM 554 >gi|293399769|ref|ZP_06643915.1| arginine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306169|gb|EFE47412.1| arginine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 555 Score = 335 bits (859), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 199/568 (35%), Positives = 306/568 (53%), Gaps = 42/568 (7%) Query: 19 DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PD 77 D ++K+EK IVIE P+D +HG STN AM L+R L +P IAE + + ++ Sbjct: 29 DTEVKIEK-----IVIEIPKDKSHGDYSTNLAMQLTRLLKNNPRVIAEALQQNLDMEAAA 83 Query: 78 VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMH 137 ++ IAG GF+N + + L +I+ +++ G +G N G +VNIE+VSANPTG +H Sbjct: 84 IEHCEIAGPGFLNFKIKNTSLAQIIKTVLAQGDNFGHNETGNHERVNIEYVSANPTGDLH 143 Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP 197 +GH R A GD++ LM SGY+VTREYY+NDAG QI L S+ RY++ L LP Sbjct: 144 LGHARGAAWGDSITRLMKASGYDVTREYYVNDAGNQIVNLGKSLQARYREYL-GLPFVLP 202 Query: 198 EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257 E Y G ++ + +LA Y +E L K+ + + I+ DL + D Sbjct: 203 EDGYHGEDVRKIAVKLAQTYGQTYAEENDEN-LKFFKEKGIAFELDKIKCDLDNFRVHFD 261 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 ++ SE D + +D L +G YE + L F++T G Sbjct: 262 VWSSEQKIR--DDGKVEKALDVLHEKGLTYE----------------EEGALWFKTTQFG 303 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 DD DR L K+DGSYTY D+AY K K +RGFD ++ ++G+DH GY+ RL+A A+ Sbjct: 304 DDKDRVLRKTDGSYTYLVPDIAYHKDKLDRGFDLLVDLLGADHHGYIPRLKASIQALGND 363 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437 ++ V + ++VRL +G +KMSKR G+ +T+R + DEVG D+VR+ + R LDF Sbjct: 364 PEKLQVDIIQMVRLVENGEEVKMSKRLGNAVTIRELCDEVGVDAVRYFFVQRAVDTHLDF 423 Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497 D ++QS +NPV+Y QYA+AR SI RQA D ++DL E+ Sbjct: 424 DLGLARKQSNDNPVYYAQYAHARICSILRQAPDFKEATNYDLLTHE----------KEIS 473 Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557 L+ ++ E+ V+ +A + P+K+ Y+ LA FH ++ + + + L+ Sbjct: 474 LMKYINEFTNVVSDAAKTRAPHKVCNYIQKLAQHFHSFYN------ACKVIDPEHEALSA 527 Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L+ A + + L +IGV++ +M Sbjct: 528 QRLALLKATRITLKNALFLIGVDAIEKM 555 >gi|242241972|ref|ZP_04796417.1| arginyl-tRNA synthetase [Staphylococcus epidermidis W23144] gi|242234603|gb|EES36915.1| arginyl-tRNA synthetase [Staphylococcus epidermidis W23144] Length = 553 Score = 335 bits (858), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 199/578 (34%), Positives = 307/578 (53%), Gaps = 43/578 (7%) Query: 15 LKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72 ++EI+ I+ D I IE P+D +G S+N AM+L++ +P IA+ IV + Sbjct: 12 IEEIEVSIRKANLAEDIPEIKIEIPKDPKNGDYSSNIAMVLTKIAKRNPREIAQAIVDHL 71 Query: 73 KID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131 V V IAG GFIN YL YL I+ + G +G K T + +E+VSAN Sbjct: 72 DTSKAHVKQVDIAGPGFINFYLDNQYLTAIIPEAITKGDRFGYATQSKNTNILLEYVSAN 131 Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 PTG +H+GH R A VGD+LA+++ +GY VTREYYINDAG QI LA S+ RY +AL + Sbjct: 132 PTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLARSIEARYFEALGD 191 Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251 ++P Y G + +GK+LA K+ E+ ++ +E+ L + V M+ ++ DL Sbjct: 192 TSYEMPADGYNGKDIIEIGKDLAVKHP-EIKDYTDEERLKTFRQLGVDYEMEKLKKDLSD 250 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 N+ D + SE + I + + + GY YE Sbjct: 251 FNVHFDNWFSETSLYEN--GAIENTLSKMKELGYTYEA----------------DGATWL 292 Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371 R++ DD DR L+K DG+YTYF D AY K RG D +I +MG+DH GY+ RL+A Sbjct: 293 RTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGADHHGYINRLKASL 352 Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431 ++ + + ++VRL ++G +KMSKR G+ ITLR ++DEVG D+ R+ + R Sbjct: 353 ETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGIDAARYFLTMRSP 412 Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQ 487 DFD KEQS++NP++Y QYA+AR SI +QAK ++ D DF + Sbjct: 413 DSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEQGIEVSTDADFSKINND---- 468 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 + L+ +AE+ IE+A + P++L Y+ DLA+ FH ++ + Sbjct: 469 ------KAIDLLKKVAEFESTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAEK------- 515 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V ++ + T + ++ AV +++ L ++GV +P M Sbjct: 516 VLTDDTEKTKAYVAMIEAVRITLHNALALVGVTAPESM 553 >gi|332671324|ref|YP_004454332.1| arginyl-tRNA synthetase [Cellulomonas fimi ATCC 484] gi|332340362|gb|AEE46945.1| arginyl-tRNA synthetase [Cellulomonas fimi ATCC 484] Length = 560 Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 200/560 (35%), Positives = 298/560 (53%), Gaps = 43/560 (7%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +ERPR HG +TN AM L++ G +P AE + R+K V SV +AG GF+N+ L Sbjct: 36 LERPRQREHGDWATNVAMQLAKKAGTNPRAFAEELARRLKETSGVASVEVAGPGFLNIRL 95 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + ++ SIV G EYGRN G ++N+EFVSANPTGP+H+G R A VGD+LA + Sbjct: 96 DAAAAGELARSIVEQGGEYGRNDTLAGVRLNLEFVSANPTGPLHIGGVRWAAVGDSLARV 155 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE- 212 + SG +V REYY ND GAQI+ A S+ R D PE Y G Y+ + ++ Sbjct: 156 LQASGADVAREYYFNDHGAQIDRFARSLVARALS------EDAPEDGYGGSYITEIAEQV 209 Query: 213 LADKYSS---ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 +AD ++ + P ++ + V+ M I+ L + D++ ED H + Sbjct: 210 VADALAAGEPDPRTLPRDEATEAFRARGVELMFAEIKQSLHDFGVDFDVYFHEDSLH--E 267 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + ++ L G+V+E + R+T GDD DR ++KSDG Sbjct: 268 SGAVEHAVERLRAGGHVFE----------------QDGAVWLRTTDFGDDKDRVVIKSDG 311 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK-KAQINVLLCEL 388 Y + D+AY+ K ERGFD +I ++G+DH GYV R+ AV AA + + +L+ ++ Sbjct: 312 EGAYISGDIAYYLDKRERGFDRVILMLGADHHGYVGRMMAVCAAFGDTPHVNLEILIGQM 371 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V L +DG P++MSKRAG +T+ +VD VG D+ R+ + +D D + E Sbjct: 372 VNLVKDGEPVRMSKRAGTVLTIDDLVDAVGVDAARYSLARSSADSTIDLDLDLLASAKNE 431 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 NPVFYVQYA+AR SI R A D + D F +++ E SE L+ LAE+PR+ Sbjct: 432 NPVFYVQYAHARTASIGRNAVDAGVRKE-DGFDASLLDHE-----SEAVLLGQLAEFPRI 485 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT---MMRLQLVHA 565 + A +EP+++A YL DLA FH W + + R V + + RL LV A Sbjct: 486 VAQAAELREPHRVARYLEDLAGTFH-KWY----DAKRRVVPFGDEPVDDGHRTRLWLVDA 540 Query: 566 VASIINSGLNIIGVESPNEM 585 ++ +GL ++GV +P M Sbjct: 541 TRQVLANGLGLLGVSAPERM 560 >gi|257092605|ref|YP_003166246.1| arginyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045129|gb|ACV34317.1| arginyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 590 Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 208/599 (34%), Positives = 304/599 (50%), Gaps = 82/599 (13%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I IERP+ AHG S N AM L+R L +P +AEL+++ + P V IAG GFIN Sbjct: 29 IHIERPKQAAHGDFSCNLAMQLARSLKRNPRQLAELLLSELPPSPWVSKAEIAGAGFINF 88 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +L P+ +++ ++ ++GR+ G KV +EFVSANPTGP+HVGH R A G +L Sbjct: 89 HLPPTAKIQVVRDVLEQAEDFGRSTSGGRRKVLVEFVSANPTGPLHVGHGRGAAYGGSLC 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHV 209 L+AF+G++VT EYY+NDAG Q++ LALS + RY + S P Y G Y++ + Sbjct: 149 KLLAFAGWDVTSEYYVNDAGRQMDILALSTWLRYLELCSGEGTPSLFPPNAYQGDYVRAM 208 Query: 210 GKEL------------------------ADKYSSELLNFPE---------------EKWL 230 +L A++ +E E E+W Sbjct: 209 ASQLLTAHGERYRRTASDVLAGTPGLPGAERTDAEAAQQREAQLDALIVNAKHLLGEEW- 267 Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD-FHRGDPSPIRDIIDNLARQGYVYEG 289 V D+ + + R DL+ + D++ SE F G + ++ L + G++Y Sbjct: 268 QYVHDFVLTEQLADCRGDLEESGVHFDVWFSEQSLFATG---MVARCVERLEKGGHLY-- 322 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349 + FRST GD+ DR + + +G YTYFA+D+AY KYERGF Sbjct: 323 --------------VQDGARWFRSTTFGDEKDRVIQRDNGFYTYFASDIAYHLNKYERGF 368 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 +I V G+DH GY+ R++ +A+ + V L + LYR G MS R+GDF+T Sbjct: 369 QRIINVWGADHHGYIPRVKGAVSALGLDPEVLEVALVQFAVLYRSGCKASMSTRSGDFVT 428 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS---IFR 466 LR + EVG+D+ RF + RK+ + LDFD K QS +NPVFYVQYA+AR RS ++ Sbjct: 429 LRTLRAEVGNDACRFFYVLRKSDQHLDFDLDLAKSQSNDNPVFYVQYAHARVRSLLALWA 488 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 + D D P S EL L L E+P V+E A P+ +AFYL Sbjct: 489 GEPQVLAGADLD-------PLGS---ARELALAARLGEFPEVVEAAAGELAPHLIAFYLR 538 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 DLA+ FH H++ R + ++ + R+ L AV +I +G+ I+GV P M Sbjct: 539 DLAAEFHSHYNAER-------ILVDDPAIRDARIALAAAVGQVIRNGMAILGVSCPESM 590 >gi|118594231|ref|ZP_01551578.1| arginyl-tRNA synthetase [Methylophilales bacterium HTCC2181] gi|118440009|gb|EAV46636.1| arginyl-tRNA synthetase [Methylophilales bacterium HTCC2181] Length = 552 Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 202/563 (35%), Positives = 304/563 (53%), Gaps = 42/563 (7%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 +IVIERP+ HG LS+N A+++++ L P T+A+ IV +I + IAG GF+N Sbjct: 24 QIVIERPKSIDHGDLSSNIALVIAKALKKSPRTVAQEIVEKIPSTRSFSKIEIAGAGFLN 83 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 Y S + KI++ + + YGR+ G K+ IEFVSANPTGP+HVGH R A +GD L Sbjct: 84 FYFSSNTHNKIINDALENNKNYGRSNQGSRKKIQIEFVSANPTGPLHVGHGRGAAIGDCL 143 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A L FSG++VTRE+Y NDAG+QI+ L S+ R L D PE Y G Y+ + Sbjct: 144 ARLFEFSGWDVTREFYYNDAGSQIDNLTKSIKARCMNVL-PEDPSFPEDGYRGEYISDIA 202 Query: 211 KE-LADKY----SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 K LA K S + + +K+Y + + K DL+A I+ D+F E F Sbjct: 203 KSYLAKKTIQNGSETFSSNGDTTDDDAIKNYGIHYLRKEQDQDLEAFKIRFDVFSLESSF 262 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 + I+D++ L G+ YE L ++T GDD DR + Sbjct: 263 Y--SQGKIKDVVTTLKNNGHTYE----------------KDGALWLKTTAFGDDKDRVMQ 304 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--KAQINV 383 KSDG++TYF D+AY K+ERGF +I G+DH V R+ A + Sbjct: 305 KSDGAFTYFVPDIAYHLNKWERGFKRVINEQGADHHSTVNRVRAGLQGLDTGIPPGWPEY 364 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443 +L +++ + ++G +K+SKRAG ++TLR ++DEVG D+ R+ ++ R+ L FD K Sbjct: 365 VLHQMITVMKNGQEVKISKRAGSYVTLRDLIDEVGCDATRYFLIARRADSQLVFDIDLAK 424 Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT-SELQLIVHL 502 Q+ ENPV+Y+QYA+AR + + Q L R+ E +++T E +LI + Sbjct: 425 SQNNENPVYYIQYAHARIQRVLMQWGGELHSL------RSTA--EYKYETLLEKKLIKKI 476 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 E+P V+E AT P+++A YL + A+ HG++ N V+ NN K RL L Sbjct: 477 EEFPEVVEAATNDLAPHQIANYLKECAADLHGYY-----NDTKFLVENNNEK--NGRLSL 529 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 + A II +GLN++G+ +P+ M Sbjct: 530 IFATQHIIKTGLNLLGISAPDSM 552 >gi|313892155|ref|ZP_07825748.1| arginine--tRNA ligase [Dialister microaerophilus UPII 345-E] gi|313119293|gb|EFR42492.1| arginine--tRNA ligase [Dialister microaerophilus UPII 345-E] Length = 554 Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 193/549 (35%), Positives = 296/549 (53%), Gaps = 44/549 (8%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G S+NAAM +R + P IAE++V I V IAG GFIN +L+ + + L Sbjct: 44 GDYSSNAAMQWARVAHMAPRKIAEILVEHID-SSLVSKTDIAGAGFINFFLAKNTVYAEL 102 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 I+ G YG V +E+VSANPTGP+H+GH R A G + +L+ +GY+V Sbjct: 103 KKILAKGENYGDLPRNDEEAVLVEYVSANPTGPLHIGHARGAAYGSAMVNLLRSAGYKVL 162 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222 EYYINDAG QI+ LALSV RY Q L D+ LPE Y G + + + D+ ++ L Sbjct: 163 AEYYINDAGNQIDNLALSVNARYLQ-LLGKDAQLPENGYHGHDIIETAQSILDRDGTKYL 221 Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282 EEK + + K+ +++ + ++ DL N++ D+++SE F+ P + +++D L + Sbjct: 222 EMDEEKRIEVFKEVALKEKLAALKKDLSDFNVEFDVWMSERSFY---PDQVNEVLDILKK 278 Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342 G +YE +T GDD DR +++S+G TYF +D+AY K Sbjct: 279 NGTLYE----------------KEDAWWLNTTKDGDDKDRVVIRSNGEPTYFCSDIAYVK 322 Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402 K ERG+ +I + G+DH GY+ R+++ ++ +++L ++V L RDG P+KMSK Sbjct: 323 NKIERGYHKLIDIWGADHHGYIARVKSAMTSLGYNADDFDIMLLQMVTLLRDGKPVKMSK 382 Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462 R G +TLR ++DEVG D R+ R +DFD K++S ENPV+Y+QYA AR Sbjct: 383 RTGQSVTLRELMDEVGVDVARYFFCSRTLDSQMDFDIDLAKKRSSENPVYYIQYANARVH 442 Query: 463 SIFRQAKD------IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 S+F+QA++ + D+DF + D SEL LI + Y ++ A + Sbjct: 443 SLFKQAEENGVKIPSWEDVDFTVL----------VDESELDLIKKMEVYHGFLKGAAAER 492 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 P ++A Y Y+LA++FH + R + KL RL L+ AV ++ L I Sbjct: 493 APQRIATYAYELAALFHHFYRKCR-------ILGEEEKLMQARLGLIRAVGYVLVHALGI 545 Query: 577 IGVESPNEM 585 +GV +P EM Sbjct: 546 LGVSAPEEM 554 >gi|320094246|ref|ZP_08026048.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338] gi|319978824|gb|EFW10365.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338] Length = 559 Score = 334 bits (857), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 210/567 (37%), Positives = 313/567 (55%), Gaps = 46/567 (8%) Query: 28 ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87 I D + +ERPR+ +G STNAAM L++ G P +A LI + V+SV +AG G Sbjct: 30 IPDPVRVERPRNRDNGDWSTNAAMQLAKRAGTAPRDLAALIADALADAEGVESVEVAGPG 89 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FIN+ L+ S ++ ++IV +G YG N G +N+E+VSANPTGP+H+G R A VG Sbjct: 90 FINIRLAASSAGQLAATIVEAGDSYGTNASLAGQDINLEYVSANPTGPVHLGGARWAAVG 149 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D+LA LM SG VTREYY ND G+QI+ A S+ Y +AL + PE Y G Y+ Sbjct: 150 DSLARLMTASGARVTREYYFNDHGSQIDRFARSL---YARAL---GREAPEDGYGGQYIA 203 Query: 208 HVGKEL-ADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 + + AD ++ L + PEE+ + + V+ M I+ L A + D+F ED Sbjct: 204 DIADRVRADARAAGLPDPVGLPEEEAVEAFRARGVELMFAEIKARLSAFRSEFDVFFHED 263 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323 H D + I+ L +G V+ D D + R+T GDD DR Sbjct: 264 SLH--DSGAVSAAIETLRGRGEVF---------------DRD-GAVWLRTTSYGDDKDRV 305 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKKAQIN 382 L+KSDG YFAAD+AY+ K RG D +Y++G+DH GY+ R+ A+ AA E + Sbjct: 306 LIKSDGQAAYFAADVAYYLDKRRRGADAAVYLLGADHHGYIGRMMAMCAAFGDEPGVNMQ 365 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 +L+ ++V L +DG P++MSKRAG +TL +VD VG D+ R+ ++ LD D + Sbjct: 366 ILIGQMVNLVKDGAPVRMSKRAGTIVTLDDLVDAVGVDAARYALVRVSMDSNLDIDLDLL 425 Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKD--IFPDLDFDLFPRNVIPQESEFDT-SELQLI 499 + + +NPV+YVQYA+AR R++ R A D + D FD + DT ++ +L+ Sbjct: 426 TQHTNDNPVYYVQYAHARTRNVARNAADHGVGRDAGFD---------PAALDTAADAELL 476 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF-VQANNRKLTMM 558 LA++P I A +EP+++A YL LA +H + R PR V+A + + Sbjct: 477 GALAQFPAQIAQAAQLREPHRVARYLEALAGTYHAWYGQCRVTPRGDDPVEAGH----VA 532 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 RL L AV+ ++ +GL ++GV +P M Sbjct: 533 RLWLNDAVSQVLRTGLGLLGVAAPERM 559 >gi|320141851|gb|EFW33679.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA177] Length = 553 Score = 334 bits (857), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 198/559 (35%), Positives = 304/559 (54%), Gaps = 41/559 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90 I IE P+D +G +TN AM+L++ +P IA+ IV + + V + IAG GFIN Sbjct: 31 IKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL YL I+ + G ++G KG V +E+VSANPTG +H+GH R A VGD L Sbjct: 91 FYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDAL 150 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+++ +GY VTREYYINDAG QI LA S+ R+ +AL +N +PE Y G + +G Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIG 210 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K+LA+K+S E+ ++ EE L + V+ M +++DL N D + SE + + Sbjct: 211 KDLAEKHS-EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 267 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I +++ + GY YE R+T DD DR L+K+DG+ Sbjct: 268 GEILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 311 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTYF D+AY K +RG D +I + G+DH GY+ RL+A ++ + + ++VR Sbjct: 312 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 371 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L +G +KMSKR G+ ITLR ++DEVG D+ R+ + R DFD KEQS++NP Sbjct: 372 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 431 Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 V+Y QYA+AR SI +QAK ++ DF I E ++L+ +A++ Sbjct: 432 VYYAQYAHARICSILKQAKEQGIEVTAANDF-----TTITNE-----KAIELLKKVADFE 481 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 IE+A + +++ Y+ DLAS FH ++ + V ++ + T + ++ AV Sbjct: 482 PTIESAAEHRSAHRITNYIQDLASHFHKFYNAEK-------VLTDDIEKTKAHVAMIEAV 534 Query: 567 ASIINSGLNIIGVESPNEM 585 + + L ++GV +P M Sbjct: 535 RITLKNALAMVGVSAPESM 553 >gi|57866242|ref|YP_187858.1| arginyl-tRNA synthetase [Staphylococcus epidermidis RP62A] gi|293368064|ref|ZP_06614696.1| arginine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)] gi|71153572|sp|Q5HRD1|SYR_STAEQ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|57636900|gb|AAW53688.1| arginyl-tRNA synthetase [Staphylococcus epidermidis RP62A] gi|291317754|gb|EFE58168.1| arginine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)] gi|329738198|gb|EGG74413.1| arginine--tRNA ligase [Staphylococcus epidermidis VCU045] Length = 553 Score = 334 bits (857), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 199/578 (34%), Positives = 307/578 (53%), Gaps = 43/578 (7%) Query: 15 LKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72 ++EI+ I+ D I IE P+D +G S+N AM+L++ +P IA+ IV + Sbjct: 12 IEEIEVSIRKANLAEDIPEIKIEIPKDPKNGDYSSNIAMVLTKIAKRNPREIAQAIVDHL 71 Query: 73 KID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131 V V IAG GFIN YL YL I+ + G +G K T + +E+VSAN Sbjct: 72 DTSKAHVKQVDIAGPGFINFYLDNQYLTAIIPEAITKGDRFGYATQSKNTNILLEYVSAN 131 Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 PTG +H+GH R A VGD+LA+++ +GY VTREYYINDAG QI LA S+ RY +AL + Sbjct: 132 PTGDLHIGHARNASVGDSLANILIAAGYNVTREYYINDAGNQITNLARSIEARYFEALGD 191 Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251 ++P Y G + +GK+LA K+ E+ ++ +E+ L + V M+ ++ DL Sbjct: 192 TSYEMPADGYNGKDIIEIGKDLAVKHP-EIKDYTDEERLKTFRQLGVDYEMEKLKKDLSD 250 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 N+ D + SE + I + + + GY YE Sbjct: 251 FNVHFDNWFSETSLYEN--GAIENTLSKMKELGYTYEA----------------DGATWL 292 Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371 R++ DD DR L+K DG+YTYF D AY K RG D +I +MG+DH GY+ RL+A Sbjct: 293 RTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGADHHGYINRLKASL 352 Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431 ++ + + ++VRL ++G +KMSKR G+ ITLR ++DEVG D+ R+ + R Sbjct: 353 ETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGIDAARYFLTMRSP 412 Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQ 487 DFD KEQS++NP++Y QYA+AR SI +QAK ++ D DF + Sbjct: 413 DSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEQGIEVSTDADFSKINND---- 468 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 + L+ +AE+ IE+A + P++L Y+ DLA+ FH ++ + Sbjct: 469 ------KAIDLLKKVAEFESTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAEK------- 515 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V ++ + T + ++ AV +++ L ++GV +P M Sbjct: 516 VLTDDTEKTKAYVAMIEAVRITLHNALALVGVTAPESM 553 >gi|303327748|ref|ZP_07358188.1| arginine--tRNA ligase [Desulfovibrio sp. 3_1_syn3] gi|302862109|gb|EFL85043.1| arginine--tRNA ligase [Desulfovibrio sp. 3_1_syn3] Length = 551 Score = 334 bits (856), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 213/560 (38%), Positives = 312/560 (55%), Gaps = 38/560 (6%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFI 89 + VIE PRD HG LSTNAAM+L++ +P +A+ AR+ + PD++ AG GF Sbjct: 25 KTVIEPPRDPKHGDLSTNAAMLLAKEAKCNPRELAQKFAARLLERCPDLEKAEAAGPGFC 84 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N+ S ++ R+ + + +G YG + G G KV +E+VSANPTGP+HVGH R A VGD+ Sbjct: 85 NVTFSQAFWRRTVLDVEAAGGAYGASGTGAGRKVLLEYVSANPTGPLHVGHGRGAAVGDS 144 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 LA L+ +GY V EYYINDAG Q+ L LSV+ R + L D PE YY G Y+ + Sbjct: 145 LARLLRKAGYAVDTEYYINDAGRQMRLLGLSVWLRVLE-LAGRPVDWPEDYYRGEYIIDI 203 Query: 210 GKE-LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF-HR 267 +E LAD L + PE + ++ ++ I+ DL ++H + SE R Sbjct: 204 AREMLAD--DPHLPDLPEAEGQECCYQRAMNEILAGIKADLNEFRVEHQRWFSEKTLVER 261 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 G + L R GY YE F + +GDD DR L KS Sbjct: 262 G---AVDAAFTALGRSGYTYE----------------KENAFWFATEQLGDDKDRVLKKS 302 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387 DGS TYFA D+AY K+ERG+D +I + G+DH GYV R+ A A+ + +V+L + Sbjct: 303 DGSLTYFATDIAYHHDKFERGYDWLIDIWGADHHGYVPRMRAAITAMGRPRDSFDVVLIQ 362 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 LV L RDG P+ MS RAG F TL V+ EVG+D+ RFM L RK+ LDFD K++S Sbjct: 363 LVNLLRDGKPVSMSTRAGTFETLADVLREVGADAARFMFLSRKSDSPLDFDLELAKQRSL 422 Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE-SEFDTSE-LQLIVHLAEY 505 +NPV+YVQYA+AR ++ R+A + L P V + + DT E + L+ A + Sbjct: 423 DNPVYYVQYAHARICAVLRRAGERGVGL-----PETVTEEMLAGLDTPEDMALLRKAAAF 477 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 ++ A A + ++ YL +LA + H +++ R + + A+++ T+ RL L+ A Sbjct: 478 QDMLAAAARALAAHHVSHYLTELAGLLHSYYA------RHQVLLADDQPRTLARLALLRA 531 Query: 566 VASIINSGLNIIGVESPNEM 585 VA ++ +GL+++GV +P M Sbjct: 532 VAQVLRNGLDVLGVSAPEAM 551 >gi|220904017|ref|YP_002479329.1| arginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|254782958|sp|B8IYS4|SYR_DESDA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|219868316|gb|ACL48651.1| arginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 550 Score = 334 bits (856), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 200/564 (35%), Positives = 317/564 (56%), Gaps = 47/564 (8%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFI 89 + VIE PRD HG LS N+AM+L+R +P +A+ AR+ + PDV+ AG GF Sbjct: 25 KTVIEPPRDPRHGDLSVNSAMLLAREAKTNPRELAQKFAARLLERCPDVEKAEAAGPGFC 84 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N+ S ++ R+ ++ I +G YG + G +V +E+VSANPTGP+HVGH R A VGD+ Sbjct: 85 NVTFSQAFWRQTVTDIESAGQAYGESR-EPGRRVLLEYVSANPTGPLHVGHGRGAAVGDS 143 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 LA L+ +G+ V EYYINDAG Q+ L LSV+ R + L + PE YY G Y+ + Sbjct: 144 LARLLRKAGHHVHTEYYINDAGRQMRLLGLSVWLRVLE-LAGRPVEWPEDYYRGDYIIDI 202 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 +E+ + L + P + + + ++ ++ I+DDL+ ++H + SE + Sbjct: 203 AREMLTA-NPALPDMPAPEGEDLCYEKAMTDILNGIKDDLRDFRVEHLRWFSEKTLV--E 259 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + L + GY YE F + +GDD +R L KSDG Sbjct: 260 TGAVDAAFAALGKSGYTYE----------------QDNAFWFATEQLGDDKNRVLKKSDG 303 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 S TYFA+D+AY K+ERG+D +I V G+DH GY+ R+ A A+ +++ +V+L +LV Sbjct: 304 SLTYFASDIAYHHDKFERGYDWLIDVWGADHHGYIPRMRAAITAMGKERDSFDVVLIQLV 363 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 L R+G P+ MS RAG F TL V+ EVG+D+ RFM L RK+ LDFD K++S +N Sbjct: 364 NLLREGQPVSMSTRAGTFETLADVIKEVGTDAARFMFLSRKSDSPLDFDLELAKQRSLDN 423 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN-VIPQESE------FDTSE-LQLIVH 501 PV+YVQYA+AR ++ R+A + R V+P++S+ DT+E + L+ Sbjct: 424 PVYYVQYAHARICAVLRRAAE-----------RGFVLPEKSDAALLAPLDTAEDMTLLRK 472 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 A + ++ A + + ++ YL +LA + H +++ R + + A++ T+ RL Sbjct: 473 AAAFEDMLFAAAQSLGVHHVSHYLTELAGLLHSYYA------RHQVLLADDAPRTLARLA 526 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 L+ +V ++ +GL+++GV +P M Sbjct: 527 LLRSVGQVVRNGLDVLGVSAPESM 550 >gi|238927166|ref|ZP_04658926.1| arginine--tRNA ligase [Selenomonas flueggei ATCC 43531] gi|238884948|gb|EEQ48586.1| arginine--tRNA ligase [Selenomonas flueggei ATCC 43531] Length = 589 Score = 334 bits (856), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 203/566 (35%), Positives = 290/566 (51%), Gaps = 44/566 (7%) Query: 25 EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84 E L I++E P + G +TN AM +R P IAE++ I +D +A Sbjct: 63 EGGTLPPILLEEPPNKELGDFATNFAMQSARIFHQPPKKIAEILGTHI-TGSWLDHAEVA 121 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 G GF+N YL + L I+ +G YG + +E+VSANPTGP+HVGH R A Sbjct: 122 GPGFLNFYLKKDVIADTLRDILRTGENYGALPPKDLPPIQVEYVSANPTGPLHVGHGRGA 181 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204 VG L L+ +GYEV EYY+NDAG Q++ LA+SV RY + L PE Y G Sbjct: 182 AVGSALVKLLRTAGYEVQSEYYVNDAGKQMDLLAISVNARYLERL-GQKIVFPENGYHGA 240 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 + + + D+ L EE+ L KD + + + ++R+DL + D + SE Sbjct: 241 DIIDTAQRIIDRDGDRYLALSEEERLEKFKDIAYKEKLAVLREDLADFRVTFDRWFSERT 300 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 H P ++ ++D L +G YE + RST GDD DR + Sbjct: 301 LH---PEAVQRVVDVLLERGTAYE----------------KDGAVWLRSTDYGDDKDRVI 341 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 + +G TY AAD+AY KY RGF ++ + G+DH GYV R++A A+ Q+ VL Sbjct: 342 FRDNGVPTYLAADIAYHDNKYARGFGRLVNIWGADHHGYVARVKAAMEALGHDSKQLTVL 401 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L ++V LYRDG +K+SKR G+ +TLR +++EVG D+ R+ L R LDFD K+ Sbjct: 402 LLQMVSLYRDGEVVKLSKRTGETVTLRELMEEVGVDAARYFFLMRSLDSQLDFDLDLAKK 461 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE-----FDTSELQLI 499 +S ENPV+Y+QYA+AR SIFRQA ++ D P E E D +E+ LI Sbjct: 462 KSNENPVYYIQYAHARISSIFRQAAEMRID-----------PAEGEKLDVLTDETEIALI 510 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 L YP IE A P ++A Y ++LA+ FH ++ R + L R Sbjct: 511 KKLGAYPEEIERAASELAPQRIARYSHELAAAFHSFYNKCR-------IVGQEPVLAAAR 563 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L LV A +I L I+GV +P +M Sbjct: 564 LSLVLATGHVIRHSLGILGVSAPEKM 589 >gi|295394643|ref|ZP_06804862.1| arginine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030] gi|294972536|gb|EFG48392.1| arginine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030] Length = 546 Score = 333 bits (855), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 206/560 (36%), Positives = 316/560 (56%), Gaps = 48/560 (8%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKG 87 ++V+ERP++ HG +TN A+ ++ GL P EL +I DVD + +AG G Sbjct: 30 KLVVERPKNRDHGDWATNVALQTAKKTGLQPR---ELATGLAQILSDVDGIEKAEVAGPG 86 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 F+N+ L+ K+ + IV +G EYGR K + +N+EFVSANPTGP+H+GH R A +G Sbjct: 87 FLNITLAAGAAGKLAADIVSAGREYGRGESLKDSTINLEFVSANPTGPLHIGHTRWAALG 146 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D + ++ +G VT EYYINDAG+Q++T A SV R + D+PEG YPG Y+ Sbjct: 147 DAIGRVLKAAGATVTTEYYINDAGSQMDTFANSVLARMRG------KDVPEGGYPGQYIA 200 Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 + +EL ++ E + +E VKD + +A +K I D L++ + D + SE H Sbjct: 201 DIARELLSRH-PEWNDAKDEDIFEQVKDEAYKAQLKDISDTLESFGVHFDTWFSERTLH- 258 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 D I + ++ L QG+V+E + + R+T GDD DR L++S Sbjct: 259 -DTGAIAEAVERLREQGHVFE----------------NEGAIWLRTTDFGDDKDRVLVRS 301 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA-AVSEKKAQINVLLC 386 DG TYFAAD AY+ K +RGF+ IY++G+DH GYV RL+A+AA A + I +L+ Sbjct: 302 DGVPTYFAADAAYYLNKRDRGFEEKIYLLGADHHGYVGRLKALAATAGDDPNRNIEILIG 361 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446 +L+ + +G ++SKRAG+ I LR +V+ +GSD+VR+ + L D +K S Sbjct: 362 QLISV--NGA--RLSKRAGNIIELRDLVEWLGSDAVRYSLARTPADSPLALDPEVLKSAS 417 Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVIPQESEFDTSELQLIVHLAEY 505 +NPV+YVQYA+AR +S+ R+A D FD P + D +E L+ LA+Y Sbjct: 418 NDNPVYYVQYAHARAKSVERKATSAGVSTDSFD--PATLQ------DPTEAALLSALADY 469 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 PRV+ + +EP+++A YL LA +FH + R P + RL L A Sbjct: 470 PRVVAQSAQLREPHRVARYLESLAGLFHKWYDACRVTP---LGDDPVEPVHSSRLMLDMA 526 Query: 566 VASIINSGLNIIGVESPNEM 585 A+++++GL+++GV +P M Sbjct: 527 TATVLSNGLDLMGVSAPERM 546 >gi|255020170|ref|ZP_05292239.1| Arginyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756] gi|254970312|gb|EET27805.1| Arginyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756] Length = 580 Score = 333 bits (855), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 210/597 (35%), Positives = 314/597 (52%), Gaps = 68/597 (11%) Query: 24 VEKKILDRIV----IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD 79 VE L R+ +ERP+ +HG L++N A++L++ P +AE IVA + P + Sbjct: 17 VESGALSRVPETLELERPKQASHGDLASNVALLLAKDARCKPRELAERIVAAMPASPHIA 76 Query: 80 SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139 IAG GFIN +L P ++++ + G +G + G+G +++EFVSANPTGP+HVG Sbjct: 77 RCEIAGPGFINFFLRPEAFQEVVRLVYAQGERFGAHDFGEGETLHLEFVSANPTGPLHVG 136 Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199 H R A G +LA+L+ F GY V EYY+NDAG Q++ LA SV+ RY L N DLP Sbjct: 137 HGRGAAYGASLANLLRFCGYRVFCEYYVNDAGRQMDILAASVYLRY---LENAGLDLPWP 193 Query: 200 Y----YPGVYLKHVG----KELADKYSSELLNFP----------------EEKWLPIVKD 235 Y Y G YL + +E D+ + N P ++ + D Sbjct: 194 YPSNAYRGDYLLPIAAALRREFGDRLTPAARNLPDLSRFEDADAAMDALIQQLKTDLGPD 253 Query: 236 YS------VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 Y+ + ++ IR+DL + +D + SE D I +++L G+ Y Sbjct: 254 YAPLHRAGLDTILADIREDLAEFGVHYDGWYSERSLM--DSGAITRAVESLTAAGHTY-- 309 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349 + L FRST GDD DR L + +G+YTYFA+D+AY K+ RGF Sbjct: 310 --------------VQDGALWFRSTDYGDDKDRVLRRENGAYTYFASDVAYHADKFARGF 355 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 ++ + G+DH GY+ R+ A A+ A + +LL + LYR + MS RAG+F+T Sbjct: 356 RQIVDMWGADHHGYIARVRASLRAMGLDDAALEILLVQFAILYRGAEKVSMSTRAGEFVT 415 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 LR + EVG+D+ RF + R+ + LDFD K+ S+ENPV+Y+QYA+AR S+FRQA+ Sbjct: 416 LRQLRAEVGNDAARFFYVLRRADQHLDFDLELAKKHSEENPVYYIQYAHARVFSLFRQAE 475 Query: 470 DIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 + P+ +P S D EL L L +P + + A+EP+++AFYL +L Sbjct: 476 EQGLST-----PQAEVPDLSPLQDGRELALADLLWRFPEAVATSARAREPHQIAFYLKEL 530 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 AS FH +++ R + R RL L AVA I +GL ++GV +P M Sbjct: 531 ASAFHTYYNATR-------ILVEERDTRHARLALARAVARTIANGLALLGVSAPERM 580 >gi|83591226|ref|YP_431235.1| arginyl-tRNA synthetase [Moorella thermoacetica ATCC 39073] gi|109895003|sp|Q2RFU7|SYR_MOOTA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|83574140|gb|ABC20692.1| arginyl-tRNA synthetase [Moorella thermoacetica ATCC 39073] Length = 560 Score = 333 bits (855), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 201/555 (36%), Positives = 314/555 (56%), Gaps = 33/555 (5%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFINL 91 VIE PRD HG + N A++L+R P +A IV + + P V V +AG GFIN Sbjct: 37 VIETPRDKTHGDFAANLALLLARQARQSPRNVAAAIVRHLERPQPGVARVEVAGPGFINF 96 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L +L +L +++ YG + IG+G KV +EFVSANPTG +H+G+ R A +GD++A Sbjct: 97 TLDNQWLLPVLPAVLAEDDHYGWSNIGQGAKVQVEFVSANPTGLLHMGNARGAALGDSIA 156 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE-GYYPGVYLKHVG 210 +L+ GY+VTRE+YINDAG QI LS+ RY QAL ++ +PE GY+ + VG Sbjct: 157 NLLTAVGYDVTREFYINDAGNQIENFGLSLEARYLQAL-GQEASIPEDGYHGEDLVATVG 215 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 + +A KY + L+ ++ ++++ + IR L+ + +D++ SE H D Sbjct: 216 RFIA-KYGDKYLDTDPALRREMLVRFALEEKLDAIRRALEDFGVTYDVWFSEQSLH--DS 272 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + I +L + GY+YE L F++T GD D +++ +G Sbjct: 273 GAVARAIADLEKAGYIYE----------------KDGALWFKATSFGDVKDEVVVRKNGI 316 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFAAD+AY + K+ERGF+ +I + G+DH G+V RL+ A+ ++ V+L +LVR Sbjct: 317 PTYFAADIAYHRNKFERGFERVINIWGADHHGHVARLKGALQALGYDPRRLEVVLMQLVR 376 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 LY+ G ++MSKR G ++TL +++EVG D+ R+ + K+ L+FD + QS +NP Sbjct: 377 LYQGGEILRMSKRTGQYVTLEELIEEVGRDAARYFFVMLKSDSHLEFDLDLARSQSADNP 436 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+YVQYA+AR SI R AK D ++ P E D +EL+LI +A +P + Sbjct: 437 VYYVQYAHARICSILRLAK----DRGLEVPPAREARLELLQDPAELELIKQIAAWPDTVA 492 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A A EP++L + +DLAS+FH ++ R V A++ ++ RL LV A + Sbjct: 493 GAAQALEPHRLTRFAHDLASLFHSFYTSCR-------VLADDPEVRKARLVLVEATRITL 545 Query: 571 NSGLNIIGVESPNEM 585 + L+++GV +P M Sbjct: 546 RNVLHLLGVTAPERM 560 >gi|118602135|ref|YP_903350.1| arginyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|166232836|sp|A1AVC2|SYR_RUTMC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|118567074|gb|ABL01879.1| arginyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 567 Score = 333 bits (855), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 195/581 (33%), Positives = 315/581 (54%), Gaps = 65/581 (11%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 + I I+ +D G ++N AM+L++ GL P +A+ I+ + + +D V IA GFI Sbjct: 27 ENIRIDHTKDKTQGDFASNIAMVLAKRSGLIPKVLAQKIIDNLGDNTQIDKVQIADPGFI 86 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N ++S +I+ I+ YG+ +GKG ++ +EFVSANPTGP+HVGH R A G T Sbjct: 87 NFFISQGESVQIIEQIINQAEHYGKADVGKGQRILLEFVSANPTGPLHVGHGRVAAYGAT 146 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 +ASL+ G+EV EYY+NDAG Q++ LA+SV+ RY + P+ Y G Y+ + Sbjct: 147 VASLLRAVGFEVDNEYYVNDAGRQMDILAISVYLRYVET-----EQFPDNGYKGDYIFDI 201 Query: 210 GKELA---------------------DKYSSELL---NFPEEKWLPIVKDYSVQAMMKII 245 K+++ +K+ L+ F + D ++ ++ I Sbjct: 202 AKKISGVKKLDIFISQRSVKKNAGNKEKHIDRLIANCKFQLGHDYKKILDLAINNILSGI 261 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 + DL +++ + SE D ++I+ L GY+YE Sbjct: 262 KIDLVEFGVKYQQWFSEQSLM--DSGLSKEIVKKLQDSGYIYE----------------K 303 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365 L F++T GDD+DR +++ +G YTYFA+D+AY K+ERG+D +I + G DH GY+ Sbjct: 304 EGALWFKTTDFGDDLDRVVVRKNGKYTYFASDIAYHLEKFERGYDKIINIWGVDHHGYIA 363 Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425 R++A A++ ++ +LL + V L+R+G MS R+G FITL + +EVG+D+ RF Sbjct: 364 RIKASIKALNHNSNKLEILLVQFVNLFRNGKKASMSTRSGSFITLEELREEVGNDAARFF 423 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNV 484 + K+ + ++FD K +S ENPVFY+QYA+AR S+ +QAK P + D DL N Sbjct: 424 YILSKSGQHMNFDLDLAKSKSNENPVFYIQYAHARICSVLKQAKS--PSMVDIDLSVLN- 480 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 + SE LI L Y +++++ + EP+ LA YL +LA FH ++++ + Sbjct: 481 -------NESEALLIKELNRYKDILQSSALNYEPHVLACYLRELAGHFHSYYNNSK---- 529 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ KL RL L+ AV I+ +GLN++GV +P+ M Sbjct: 530 ---FLVDDDKLRNARLFLIIAVKQILVNGLNLLGVSAPDSM 567 >gi|134102736|ref|YP_001108397.1| arginyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338] gi|291007807|ref|ZP_06565780.1| arginyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338] gi|166232837|sp|A4FN47|SYR_SACEN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|133915359|emb|CAM05472.1| arginyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338] Length = 553 Score = 333 bits (854), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 202/561 (36%), Positives = 299/561 (53%), Gaps = 46/561 (8%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + +ERPR+ HG +TN AM +++ G+ P +A + + +DSV +AG GF+NL Sbjct: 32 VTVERPRNPEHGDYATNIAMQVAKKAGVAPRDLAGWLAEALTGQDGIDSVEVAGPGFLNL 91 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+ +IL ++ + YGR +G KVN+EFVSANPTGP+H+G R A VGD L Sbjct: 92 RLAADAQGQILREVLDATDAYGRGAKYQGLKVNLEFVSANPTGPVHLGGTRWAAVGDALG 151 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 + G EVTREYY NDAGAQI+ F R A ++ PE Y G Y+ + Sbjct: 152 RTLEAQGAEVTREYYFNDAGAQIDR-----FVRSLIAAARGEA-APEDGYGGAYIGEIAN 205 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 ++ + + L + PE + + V M ++ L + D++ ED H Sbjct: 206 QVLEAEPTAL-DLPEAERHETFRRIGVGLMFDEVKRSLHDFGVDFDVYFHEDSLHT--SG 262 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + ++ L G++Y RST GDD DR L+KSDG+ Sbjct: 263 AVEKSVEQLKESGHLY----------------FADGAWWLRSTEFGDDKDRVLIKSDGTT 306 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 Y A D+AY + K RGFD IY++G+DH GY+ RL+A AAA + + VL+ ++V L Sbjct: 307 AYIAGDVAYLRDKRNRGFDLCIYMLGADHHGYIPRLKAAAAAFDDDPDAVEVLIGQMVNL 366 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 +DG P++MSKRAG + L +VD VG D+ R+ ++ LD D + ++S ENPV Sbjct: 367 VKDGKPVRMSKRAGTVLRLEDLVDAVGVDAARYSLIRSSVDSALDIDLDLISKRSNENPV 426 Query: 452 FYVQYAYARCRSIFRQAKDIFPD----LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 FYVQYA+AR S+ R A + D D DL +++ E E D LI L EYPR Sbjct: 427 FYVQYAHARLSSLQRNAASLGIDRGSVADADL---SLLTHEREGD-----LIRTLGEYPR 478 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK---LTMMRLQLVH 564 V+ +A +EP+++A YL DLAS +H + R +Q + + LT+ RLQL Sbjct: 479 VVRSAAELREPHRIARYLEDLASAYHKFYDA------CRVLQPGDDQATPLTIARLQLCE 532 Query: 565 AVASIINSGLNIIGVESPNEM 585 A ++ +GL ++GV +P +M Sbjct: 533 AARQVLANGLGLLGVSAPEQM 553 >gi|254495636|ref|ZP_05108558.1| arginyl-tRNA synthetase [Legionella drancourtii LLAP12] gi|254355206|gb|EET13819.1| arginyl-tRNA synthetase [Legionella drancourtii LLAP12] Length = 586 Score = 333 bits (854), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 202/572 (35%), Positives = 321/572 (56%), Gaps = 33/572 (5%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I ++R +D AHG ++N A+IL++P P IAEL+V + V+ V IAG GFIN Sbjct: 30 IKVDRAKDSAHGDYASNLALILAKPCRQAPRKIAELLVQALPDAAFVEKVEIAGAGFINF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +L +I++ I+ ++GR+ +G+ KV +EFVSANPTGP+HVGH R A G TL Sbjct: 90 FLRSDARSQIIAEILHKEEQFGRSTLGQNQKVLVEFVSANPTGPLHVGHGRSAAFGATLC 149 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV-- 209 +++ +GY+VT EYY+NDAG Q+N LA SV+ RY + L +P Y G Y+ + Sbjct: 150 NVLKAAGYDVTSEYYVNDAGRQMNILAASVWLRYLE-LAAEPVVIPANAYKGEYVIEIAQ 208 Query: 210 ------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK----IIRDDLKALNIQHDIF 259 GK+ ++ L P ++ K+ + AM++ ++ D AL QH + Sbjct: 209 VLWTQHGKQFVHPWAEILNGMPADEPQGGDKEIYIDAMIERANVLLGQDAFALFHQHALT 268 Query: 260 ISEDDFHRGDPSPIRDIIDN------LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313 DD + D + DN L + G + +GI + T + L F++ Sbjct: 269 TVLDDI-KDDLTEFGVHYDNWFSEYSLFQDGSIEKGIQALKDAGHTYE---QEGALWFKA 324 Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373 T GD+ DR L++++G TYFA+D+AY KY+RGFD +I + G+DH GYV RL + A Sbjct: 325 TDFGDEKDRVLVRANGQKTYFASDVAYHWNKYDRGFDRVIDIFGADHHGYVTRLRSAVTA 384 Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433 + + + VLL + LYR G ++MS R+G F+TLR + EVG+D+ RF + RK+ + Sbjct: 385 LGHDERALTVLLVQFAILYRGGDRVQMSTRSGSFVTLRELRQEVGNDAARFFYVARKSEQ 444 Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493 +DFD K +S +NPV+Y+QYA+AR S+ RQ K+ D + NV + +T Sbjct: 445 HMDFDLDLAKSESSDNPVYYLQYAHARICSVLRQLKERGLLWDKAIGLENVHLLDQPHET 504 Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553 + LI + YP V+E + + EP+++A+YL +LA+ H +++ + + Sbjct: 505 A---LIALICRYPEVVELSASSCEPHQIAYYLRELANGLHSYYNAVQ-------LLCEQE 554 Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +L RL L+ AV ++++GL+++GV +P M Sbjct: 555 QLRCARLCLLAAVRQVLSNGLDLLGVSAPESM 586 >gi|289706375|ref|ZP_06502733.1| arginine--tRNA ligase [Micrococcus luteus SK58] gi|289556870|gb|EFD50203.1| arginine--tRNA ligase [Micrococcus luteus SK58] Length = 556 Score = 333 bits (853), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 208/601 (34%), Positives = 326/601 (54%), Gaps = 68/601 (11%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 L A S+ L + + D ++ +I R+ +ERPR HG +TN A+ L + G+ P Sbjct: 6 LSALLSAVLTDAVDAGDLPAELRGEITPARVKVERPRSREHGDWATNVALQLGKKAGMAP 65 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +A L+ R+ P + +V +AG GF+N+ L + + IV +G EYGRN G Sbjct: 66 RDLAGLVAERLTGKPGIAAVDVAGPGFLNVTLDAASAGALAREIVEAGPEYGRNDALAGH 125 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 VN+EFVSANPTGP+H+GH R A +GD +A L+ SG +VT EYY+NDAG Q+N A SV Sbjct: 126 TVNMEFVSANPTGPLHIGHTRWAALGDAIARLLRASGADVTAEYYVNDAGNQMNVFADSV 185 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE---LLNFPEEKWLPIVKDYSV 238 R + D+P G YPG Y+ +ELAD + E + +E P+V++ + Sbjct: 186 LARL------HGRDVPAGGYPGAYV----QELADAVALEHPDVRELTDEAARPVVREAAY 235 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + M+ I+D L A ++ D+F SE H D I + L QG++ Sbjct: 236 RLQMQDIKDTLAAFDVHFDVFTSEQTLH--DSGAIEQAVQRLREQGHIE----------- 282 Query: 299 TQKCDMDRKQLLF-RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 DR+ ++ ++T GDD DR L++++G TYFAAD AY+ K +RGF+ +Y++G Sbjct: 283 ------DREGAVWLKTTDFGDDKDRVLIRANGEPTYFAADAAYYLHKRDRGFEEKVYLLG 336 Query: 358 SDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 +DH GYV RL+A+AAA + A I +L+ +L+ + +G K+SKRAG+ I L+ +V+ Sbjct: 337 ADHHGYVNRLKAIAAAAGDDPATNIEILIGQLISV--NGA--KLSKRAGNIIELKDLVEW 392 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 +G D++R+ + L D ++ + +NPV+YVQYA+AR R A+ D Sbjct: 393 LGRDALRYDLARYPADSPLTIDPELLRSATNDNPVYYVQYAHARASGAARTAQAHGVD-- 450 Query: 477 FDLFPRNVIPQESEFD------TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 SEFD +E +L+ LAE+P V+ A +EP+++A +L +A Sbjct: 451 -----------RSEFDAALLTHATESELLAQLAEFPAVVGAAARLREPHRVARHLEVIAG 499 Query: 531 VFHGHWSHGR------ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 +H ++ R ++ R V+ NR RL L A A ++ +GL ++GV +P + Sbjct: 500 AYHSWYAACRIVPMPTDDGTPRPVETLNR----TRLWLNDATAQVLANGLGLLGVSAPEK 555 Query: 585 M 585 M Sbjct: 556 M 556 >gi|282915944|ref|ZP_06323709.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139] gi|283769772|ref|ZP_06342664.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19] gi|282320240|gb|EFB50585.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139] gi|283459919|gb|EFC07009.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19] Length = 553 Score = 333 bits (853), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 197/559 (35%), Positives = 303/559 (54%), Gaps = 41/559 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90 I IE P+D +G +TN AM+L++ +P IA+ IV + + V + IAG GFIN Sbjct: 31 IKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL YL I+ + G ++G KG V +E+VSANPTG +H+GH R A VGD L Sbjct: 91 FYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDAL 150 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+++ +GY VTREYYINDAG QI LA S+ R+ +AL +N +PE Y G + +G Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIG 210 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K+LA+K+ E+ ++ EE L + V+ M +++DL N D + SE + + Sbjct: 211 KDLAEKHP-EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 267 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I +++ + GY YE R+T DD DR L+K+DG+ Sbjct: 268 GEILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 311 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTYF D+AY K +RG D +I + G+DH GY+ RL+A ++ + + ++VR Sbjct: 312 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 371 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L +G +KMSKR G+ ITLR ++DEVG D+ R+ + R DFD KEQS++NP Sbjct: 372 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 431 Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 V+Y QYA+AR SI +QAK ++ DF I E ++L+ +A++ Sbjct: 432 VYYAQYAHARICSILKQAKEQGIEVAATNDF-----TTITNE-----KAIELLKKVADFE 481 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 IE+A + +++ Y+ DLAS FH ++ + V ++ + T + ++ AV Sbjct: 482 PTIESAAEHRSAHRITNYIQDLASHFHKFYNAEK-------VLTDDIEKTKAHVAMIEAV 534 Query: 567 ASIINSGLNIIGVESPNEM 585 + + L ++GV +P M Sbjct: 535 RITLKNALAMVGVSAPESM 553 >gi|323142043|ref|ZP_08076891.1| arginine--tRNA ligase [Phascolarctobacterium sp. YIT 12067] gi|322413430|gb|EFY04301.1| arginine--tRNA ligase [Phascolarctobacterium sp. YIT 12067] Length = 574 Score = 333 bits (853), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 210/581 (36%), Positives = 305/581 (52%), Gaps = 59/581 (10%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 L +++E P G +TN AM +R L P IA+ +V + VD + IAG GF Sbjct: 29 LPEVMLEVPPQKEFGDFATNFAMQSARSLHCAPRQIAQAVVDNLDC-ASVDKMEIAGPGF 87 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKG-TKVNIEFVSANPTGPMHVGHCRCAVVG 147 IN YL ++ +L+ I+ +G YG NL G +V +E+VSANPTGP+HVGH R A VG Sbjct: 88 INFYLKQNWTADLLAGILAAGENYG-NLPANGLGRVQVEYVSANPTGPLHVGHARGAAVG 146 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND-----SDL------ 196 + +L+ +GY+V EYYINDAG Q+N LA SV RY Q L + +DL Sbjct: 147 SAMVNLLRAAGYDVESEYYINDAGNQMNNLANSVNARYLQLLKLEEMGGVPADLTVKQLD 206 Query: 197 --------PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248 PE Y G + + + Y E + E++ L + + + + +++D Sbjct: 207 EMPTGIPFPENGYHGYDIIETAQRIIRIYGKEFVALEEKERLAKFLEIAYKEKLAGLKED 266 Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308 L+A + D++ SE H D IR+ L +G VYE K K Sbjct: 267 LEAFGVTFDVWFSEQSLH--DADKIREACKFLEEKGCVYE--------KDGAK------- 309 Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368 F ST GDD DR +++ +G TYFAAD+AY + K+ERGFD +I + G+DH GY+ R++ Sbjct: 310 -WFNSTAYGDDKDRVVIRDNGVSTYFAADIAYHRNKFERGFDRIINLWGADHHGYIARVK 368 Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428 A A+ ++ VLL ++VRLYR+G +K+SKR G+ ITLR ++DEVG D+ R+ Sbjct: 369 AAVNALGFDADKLEVLLLQMVRLYRNGDIVKLSKRTGETITLRELMDEVGVDAARYFFCM 428 Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488 R LDFD E+S ENPV+Y+QYA+AR SI RQ + + V E Sbjct: 429 RSLDSQLDFDMTLATEKSNENPVYYIQYAHARICSIARQLAEAGIEA--------VALDE 480 Query: 489 SEFDT----SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 + DT EL L+ L EYP ++ A + + +A Y Y+LA++FH ++ R Sbjct: 481 LKLDTLQAPEELALVKKLGEYPELLARAARERAVHHVATYTYELATLFHSFYNQCR---- 536 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + L R+ LV AV I L I+GV +P M Sbjct: 537 ---ILGVDTDLQQARIALVKAVGHTIRHALGILGVSAPERM 574 >gi|21282300|ref|NP_645388.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2] gi|57650073|ref|YP_185547.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL] gi|87162053|ref|YP_493299.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88194381|ref|YP_499174.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151220791|ref|YP_001331613.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. Newman] gi|161508858|ref|YP_001574517.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221141554|ref|ZP_03566047.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253732951|ref|ZP_04867116.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130] gi|258450930|ref|ZP_05698982.1| arginyl-tRNA synthetase [Staphylococcus aureus A5948] gi|262049698|ref|ZP_06022565.1| arginyl-tRNA synthetase [Staphylococcus aureus D30] gi|262051928|ref|ZP_06024142.1| arginyl-tRNA synthetase [Staphylococcus aureus 930918-3] gi|282921898|ref|ZP_06329596.1| arginyl-tRNA synthetase [Staphylococcus aureus A9765] gi|284023632|ref|ZP_06378030.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132] gi|294849263|ref|ZP_06790006.1| arginyl-tRNA synthetase [Staphylococcus aureus A9754] gi|297208668|ref|ZP_06925096.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300912759|ref|ZP_07130201.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70] gi|304381781|ref|ZP_07364429.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|23822182|sp|Q8NXT8|SYR_STAAW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|71153571|sp|Q5HI60|SYR_STAAC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|109895038|sp|Q2FJ29|SYR_STAA3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|123291835|sp|Q2G0F8|SYR_STAA8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|172048787|sp|A6QER9|SYR_STAAE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|189083553|sp|A8Z117|SYR_STAAT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|21203737|dbj|BAB94436.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2] gi|57284259|gb|AAW36353.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL] gi|87128027|gb|ABD22541.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87201939|gb|ABD29749.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150373591|dbj|BAF66851.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. Newman] gi|160367667|gb|ABX28638.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253729131|gb|EES97860.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130] gi|257861350|gb|EEV84159.1| arginyl-tRNA synthetase [Staphylococcus aureus A5948] gi|259160185|gb|EEW45215.1| arginyl-tRNA synthetase [Staphylococcus aureus 930918-3] gi|259162241|gb|EEW46816.1| arginyl-tRNA synthetase [Staphylococcus aureus D30] gi|269940186|emb|CBI48563.1| putative arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20] gi|282593751|gb|EFB98742.1| arginyl-tRNA synthetase [Staphylococcus aureus A9765] gi|294823795|gb|EFG40221.1| arginyl-tRNA synthetase [Staphylococcus aureus A9754] gi|296886613|gb|EFH25518.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300885863|gb|EFK81066.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70] gi|302750507|gb|ADL64684.1| putative arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304339732|gb|EFM05678.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315196545|gb|EFU26894.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01] gi|320140058|gb|EFW31919.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA131] gi|329313330|gb|AEB87743.1| Arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131] gi|329729920|gb|EGG66312.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189] Length = 553 Score = 332 bits (852), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 197/559 (35%), Positives = 303/559 (54%), Gaps = 41/559 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90 I IE P+D +G +TN AM+L++ +P IA+ IV + + V + IAG GFIN Sbjct: 31 IKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL YL I+ + G ++G KG V +E+VSANPTG +H+GH R A VGD L Sbjct: 91 FYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDAL 150 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+++ +GY VTREYYINDAG QI LA S+ R+ +AL +N +PE Y G + +G Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIG 210 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K+LA+K+ E+ ++ EE L + V+ M +++DL N D + SE + + Sbjct: 211 KDLAEKHP-EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 267 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I +++ + GY YE R+T DD DR L+K+DG+ Sbjct: 268 GEILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 311 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTYF D+AY K +RG D +I + G+DH GY+ RL+A ++ + + ++VR Sbjct: 312 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 371 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L +G +KMSKR G+ ITLR ++DEVG D+ R+ + R DFD KEQS++NP Sbjct: 372 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 431 Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 V+Y QYA+AR SI +QAK ++ DF I E ++L+ +A++ Sbjct: 432 VYYAQYAHARICSILKQAKEQGIEVTAANDF-----TTITNE-----KAIELLKKVADFE 481 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 IE+A + +++ Y+ DLAS FH ++ + V ++ + T + ++ AV Sbjct: 482 PTIESAAEHRSAHRITNYIQDLASHFHKFYNAEK-------VLTDDIEKTKAHVAMIEAV 534 Query: 567 ASIINSGLNIIGVESPNEM 585 + + L ++GV +P M Sbjct: 535 RITLKNALAMVGVSAPESM 553 >gi|88705210|ref|ZP_01102921.1| Arginyl-tRNA synthetase, class Ic [Congregibacter litoralis KT71] gi|88700300|gb|EAQ97408.1| Arginyl-tRNA synthetase, class Ic [Congregibacter litoralis KT71] Length = 560 Score = 332 bits (852), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 195/561 (34%), Positives = 301/561 (53%), Gaps = 36/561 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + +ER RD AHG L++N A+ ++ L + P +A+ I + + +D IAG GFIN Sbjct: 29 VQVERTRDAAHGDLASNIALASAKLLKMPPRELAQTICDALPENTVIDRTVIAGPGFINF 88 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +LS L ++ G YG N G G KV +EFVSANPTGP+HVGH R A VGD+LA Sbjct: 89 FLSKDSQAAALLQVLSEGPRYGHNDSGAGRKVQVEFVSANPTGPLHVGHGRGAAVGDSLA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ G+EV RE+Y NDAGAQIN LALSV R + L D+ PE Y G Y+ + + Sbjct: 149 RILNACGWEVVREFYYNDAGAQINNLALSVQARC-KGLTPQDATWPEDSYRGDYIAELAQ 207 Query: 212 -----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 E + + + + L +++++V + + DL++ + D+F E + Sbjct: 208 AYLAGESVEATDKSVTATGDAEDLDAIREFAVAWLRREQDLDLQSFGVAFDVFFLESSLY 267 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 + + +D L G Y + L R+T GDD DR + K Sbjct: 268 --ESGEVATTVDRLVESGNTYS----------------NDDALWLRTTDFGDDKDRVMRK 309 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--KAQINVL 384 DG YTYF D+AY K+ RGF+ +I G+DH V R+ A A+ E + + Sbjct: 310 KDGGYTYFLPDVAYHLNKWRRGFERVINEQGADHHSTVTRVRAGLQALKEGIPEGWPEYV 369 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L ++V + RDG +K+SKRAG ++TLR +++EVG D+ R+ ++ R + L FD Sbjct: 370 LHQMVTVMRDGQEVKLSKRAGSYLTLRDLINEVGRDATRYFLVARSPNSQLTFDIDLALS 429 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 QS +NPVFY+QYA+AR S+ R K + +L +L P + E + E++++ LA Sbjct: 430 QSNDNPVFYIQYAHARVCSVRR--KFVEAELSLELNP-ETLSLERLIEPQEVEVLKQLAR 486 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 +P ++ A + EP ++A YL DLA FH +++ + V ++ +L RL L Sbjct: 487 FPEIVTRAGTSAEPQQIANYLRDLAGEFHAYYNAHK-------VLIDDAELRTARLALTT 539 Query: 565 AVASIINSGLNIIGVESPNEM 585 AV +I +GL+++GV +P M Sbjct: 540 AVGQVIANGLDLLGVSAPESM 560 >gi|298693939|gb|ADI97161.1| Arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133] Length = 553 Score = 332 bits (852), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 197/559 (35%), Positives = 303/559 (54%), Gaps = 41/559 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90 I IE P+D +G +TN AM+L++ +P IA+ IV + + V + IAG GFIN Sbjct: 31 IKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL YL I+ + G ++G KG V +E+VSANPTG +H+GH R A VGD L Sbjct: 91 FYLDNQYLTAIIPEAIEKGDQFGYVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDAL 150 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+++ +GY VTREYYINDAG QI LA S+ R+ +AL +N +PE Y G + +G Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIG 210 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K+LA+K+ E+ ++ EE L + V+ M +++DL N D + SE + + Sbjct: 211 KDLAEKHP-EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 267 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I +++ + GY YE R+T DD DR L+K+DG+ Sbjct: 268 GEILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 311 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTYF D+AY K +RG D +I + G+DH GY+ RL+A ++ + + ++VR Sbjct: 312 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 371 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L +G +KMSKR G+ ITLR ++DEVG D+ R+ + R DFD KEQS++NP Sbjct: 372 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 431 Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 V+Y QYA+AR SI +QAK ++ DF I E ++L+ +A++ Sbjct: 432 VYYAQYAHARICSILKQAKEQGIEVAAANDF-----TTITNE-----KAIELLKKVADFE 481 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 IE+A + +++ Y+ DLAS FH ++ + V ++ + T + ++ AV Sbjct: 482 PTIESAAEHRSAHRITNYIQDLASHFHKFYNAEK-------VLTDDTEKTKAHVAMIEAV 534 Query: 567 ASIINSGLNIIGVESPNEM 585 + + L ++GV +P M Sbjct: 535 RITLKNALAMVGVSAPESM 553 >gi|119961159|ref|YP_948334.1| arginyl-tRNA synthetase [Arthrobacter aurescens TC1] gi|166232754|sp|A1R7X2|SYR_ARTAT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|119948018|gb|ABM06929.1| arginyl-tRNA synthetase [Arthrobacter aurescens TC1] Length = 549 Score = 332 bits (851), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 198/584 (33%), Positives = 320/584 (54%), Gaps = 41/584 (7%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L A S+ LK+ + + + E + D + +ERP++ HG +TN A+ LS+ G++P Sbjct: 6 LSAAISACLKDAVSTGEIAL-TESAVPDAVRVERPKNRDHGDWATNIALQLSKQAGMNPR 64 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 A ++ ++ P V V IAG GF+N+ + + + +IV +G YG N G Sbjct: 65 EFAGILSNHLQGIPGVTGVEIAGPGFLNITVDAATAGALAKAIVEAGASYGTNQALAGRV 124 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VN+EFVSANPTGP+H+GH R A +GD +A ++ SG +VT EYYINDAG+Q+N A SV Sbjct: 125 VNMEFVSANPTGPLHIGHTRWAALGDAIARVLRASGADVTAEYYINDAGSQMNVFANSVL 184 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 R +PEG YPG Y++ +G E+ + + +E LP+++ + +A M Sbjct: 185 SRLH------GRGVPEGGYPGEYIRELGDEVLKAHPG-IRELTDEAALPVIRAAAYEAQM 237 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 I+ L ++ D+F SE + H D I + L QG+V++ Sbjct: 238 SDIKTTLAEFGVEFDVFFSEKELH--DAGAIESAVARLREQGHVFD-------------- 281 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 D + R+T GDD DR +++++G TYFAAD AY+ K +RGF IY++G+DH G Sbjct: 282 --DGGAVWLRTTDFGDDKDRVMIRANGEPTYFAADAAYYLSKKDRGFTEKIYLLGADHHG 339 Query: 363 YVKRLEAVAA-AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 Y+ RL+A+AA A + + I VL+ +LV + +G K+SKRAG+ I L+ ++ +G D+ Sbjct: 340 YINRLKAIAACAGDDPEVNIEVLIGQLVSV--NGA--KLSKRAGNIIELKDLISWLGKDA 395 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 VR+ + L D +K+ S ENPVFYVQYA+AR R R A + +D +F Sbjct: 396 VRYSLARFPADSPLTLDPELLKKHSNENPVFYVQYAHARSRGTARNAAE--AGVDRSVFD 453 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 +++ +E +L+ +L YP ++ A +EP+++A +L +A +H + R Sbjct: 454 ASLLDH-----ATENELLSYLGSYPSIVAKAAELREPHRVARHLEVIAGAYHRWYDACRV 508 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +P+ + + RL L A + ++ +GL ++GV +P M Sbjct: 509 SPQ---GEEPVLDVNRTRLWLNDATSQVLANGLELLGVSAPERM 549 >gi|89093512|ref|ZP_01166460.1| arginyl-tRNA synthetase [Oceanospirillum sp. MED92] gi|89082202|gb|EAR61426.1| arginyl-tRNA synthetase [Oceanospirillum sp. MED92] Length = 561 Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 206/584 (35%), Positives = 312/584 (53%), Gaps = 40/584 (6%) Query: 9 SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68 S LKN ++ V+ KI+ +E RD +HG ++N AM L++ +P +AE + Sbjct: 11 SALKNLIENGTLPADVQPKIM----VENTRDKSHGDYASNIAMTLAKAAKSNPRQLAEKL 66 Query: 69 VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128 V + ++ IAG GFIN ++S + ++ +I+ YGRN G G KV +EFV Sbjct: 67 VEALPESDNLKRTEIAGPGFINFFISGASTGNLVKTILTEKEAYGRNNDGAGRKVQVEFV 126 Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188 SANPTGP+H+GH R A VGD L LM +G++VTRE+Y NDAG QIN LA SV R + Sbjct: 127 SANPTGPLHIGHGRGAAVGDCLCRLMDANGWDVTREFYYNDAGQQINNLAFSVQARC-KG 185 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKEL--ADKYSSELLNFPEEK---WLPIVKDYSVQAMMK 243 L D P Y G Y+ + + D SE +F K L ++ ++V + Sbjct: 186 LTPEDPSWPADGYRGDYIVELAESFMRGDTVKSEDQSFTGTKDAEDLEAIRHFAVAYLRH 245 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 DL+A + D+F E + + + L GY YE Sbjct: 246 EQDLDLQAFGVDFDVFFLESSLYT--EGKVEAAVQKLIENGYTYE--------------- 288 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 D L R+T GDD DR + K DG YTYF D+AY K++RGFD +I G+DH Sbjct: 289 -DDGALWLRTTDFGDDKDRVMRKKDGGYTYFVPDVAYHLNKWQRGFDTVINEQGADHHST 347 Query: 364 VKRLEAVAAAVSEK--KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 + R+ A A+ K + +L ++V + + G +K+SKRAG ++TLR +++EVG D+ Sbjct: 348 ITRVRAGLQALKADIPKGWPDYVLHQMVTVMKGGEEVKISKRAGSYVTLRDLIEEVGRDA 407 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 R+ + RK+ L FD + +S +NPV+Y+QYA+AR SIFR+ K+ +L +D Sbjct: 408 TRYFLAARKSDSHLTFDIDLARSESADNPVYYIQYAHARVCSIFRKLKE--NNLSWDEAT 465 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 E + SE L+++L YP V++NA A+EP+++A YL DLA+ FH ++ Sbjct: 466 GIEALDSLELE-SEKNLVINLGRYPEVVKNAANAREPHQIANYLKDLAAEFHTYY----- 519 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N V+ + L RL L AV ++ +GL+++GV +P +M Sbjct: 520 NSEKTLVE--DADLRNARLTLAVAVRHVLANGLDLLGVSAPEQM 561 >gi|49482837|ref|YP_040061.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252] gi|257424726|ref|ZP_05601153.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053] gi|257427395|ref|ZP_05603794.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322] gi|257430027|ref|ZP_05606411.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397] gi|257432729|ref|ZP_05609089.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410] gi|257435633|ref|ZP_05611681.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876] gi|282903199|ref|ZP_06311090.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus C160] gi|282904986|ref|ZP_06312844.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260] gi|282907943|ref|ZP_06315777.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910251|ref|ZP_06318055.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WBG10049] gi|282913444|ref|ZP_06321233.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus M899] gi|282918397|ref|ZP_06326134.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427] gi|282923362|ref|ZP_06331042.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101] gi|283957408|ref|ZP_06374861.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus A017934/97] gi|293500491|ref|ZP_06666342.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424] gi|293509436|ref|ZP_06668147.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809] gi|293524023|ref|ZP_06670710.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015] gi|295427150|ref|ZP_06819786.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297590501|ref|ZP_06949140.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8] gi|56749422|sp|Q6GJ61|SYR_STAAR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|49240966|emb|CAG39634.1| putative arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252] gi|257272296|gb|EEV04419.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053] gi|257275588|gb|EEV07061.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322] gi|257279224|gb|EEV09825.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397] gi|257282144|gb|EEV12279.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410] gi|257284824|gb|EEV14943.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876] gi|282314230|gb|EFB44620.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101] gi|282317531|gb|EFB47903.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427] gi|282322476|gb|EFB52798.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus M899] gi|282325643|gb|EFB55951.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WBG10049] gi|282328188|gb|EFB58467.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331811|gb|EFB61322.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260] gi|282596154|gb|EFC01115.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus C160] gi|283790859|gb|EFC29674.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus A017934/97] gi|290920986|gb|EFD98047.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015] gi|291095496|gb|EFE25757.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424] gi|291467533|gb|EFF10048.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809] gi|295128938|gb|EFG58568.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297576800|gb|EFH95515.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8] gi|312438970|gb|ADQ78041.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60] gi|315193977|gb|EFU24371.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00] gi|323439428|gb|EGA97150.1| arginyl-tRNA synthetase [Staphylococcus aureus O11] gi|323442112|gb|EGA99746.1| arginyl-tRNA synthetase [Staphylococcus aureus O46] Length = 553 Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 197/559 (35%), Positives = 303/559 (54%), Gaps = 41/559 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90 I IE P+D +G +TN AM+L++ +P IA+ IV + + V + IAG GFIN Sbjct: 31 IKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL YL I+ + G ++G KG V +E+VSANPTG +H+GH R A VGD L Sbjct: 91 FYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDAL 150 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+++ +GY VTREYYINDAG QI LA S+ R+ +AL +N +PE Y G + +G Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIG 210 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K+LA+K+ E+ ++ EE L + V+ M +++DL N D + SE + + Sbjct: 211 KDLAEKHP-EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 267 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I +++ + GY YE R+T DD DR L+K+DG+ Sbjct: 268 GEILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 311 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTYF D+AY K +RG D +I + G+DH GY+ RL+A ++ + + ++VR Sbjct: 312 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 371 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L +G +KMSKR G+ ITLR ++DEVG D+ R+ + R DFD KEQS++NP Sbjct: 372 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 431 Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 V+Y QYA+AR SI +QAK ++ DF I E ++L+ +A++ Sbjct: 432 VYYAQYAHARICSILKQAKEQGIEVAAANDF-----TTITNE-----KAIELLKKVADFE 481 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 IE+A + +++ Y+ DLAS FH ++ + V ++ + T + ++ AV Sbjct: 482 PTIESAAEHRSAHRITNYIQDLASHFHKFYNAEK-------VLTDDIEKTKAHVAMIEAV 534 Query: 567 ASIINSGLNIIGVESPNEM 585 + + L ++GV +P M Sbjct: 535 RITLKNALAMVGVSAPESM 553 >gi|220913103|ref|YP_002488412.1| arginyl-tRNA synthetase [Arthrobacter chlorophenolicus A6] gi|254782940|sp|B8HB09|SYR_ARTCA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|219859981|gb|ACL40323.1| arginyl-tRNA synthetase [Arthrobacter chlorophenolicus A6] Length = 554 Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 197/569 (34%), Positives = 309/569 (54%), Gaps = 47/569 (8%) Query: 24 VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83 E + + + +ERP++ HG +TN A+ L++ G +P A ++ AR+K V +V I Sbjct: 26 AESAVPEDVRVERPKNRDHGDWATNIALQLAKQAGTNPREFATILSARLKTISGVSAVDI 85 Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143 AG GF+N+ + + + +IV +G +YG N G VN+EFVSANPTGP+H+GH R Sbjct: 86 AGPGFLNITVDAAAAGALAKAIVEAGTQYGTNTALAGHTVNMEFVSANPTGPLHIGHTRW 145 Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203 A +GD +A ++ SG +VT EYYINDAG+Q+NT A SV+ R +PEG YPG Sbjct: 146 AALGDAIARVLRASGADVTAEYYINDAGSQMNTFANSVYSRLHGL------PVPEGGYPG 199 Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 Y+ +G E+ + ++ E LP+++ + +A MK I+ L + D+F SE Sbjct: 200 QYIADLGHEVLTAH-PDIRELTEVAALPVIRAAAYEAQMKDIKATLADFGVAFDVFFSEQ 258 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323 + H D I + L QG+V++ D + R+T GDD DR Sbjct: 259 ELH--DAGAIESAVARLREQGHVFD----------------DGGAVWLRTTDFGDDKDRV 300 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK-KAQIN 382 +++++G TYFAAD AY+ K +RG+ IY++G+DH GY+ RL+A+AAA + + I Sbjct: 301 MIRANGEPTYFAADAAYYLSKKDRGYTEKIYLLGADHHGYIHRLKAIAAAAGDDPEVNIE 360 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 VL+ +LV + +G K+SKRAG+ I L+ ++D +G D+VR+ + L D + Sbjct: 361 VLIGQLVSV--NGA--KLSKRAGNIIELKDLIDWLGKDAVRYSLARFPADSPLTLDPELL 416 Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS------EL 496 K+ S ENPVFYVQYA+AR R R A + D FD S E Sbjct: 417 KKNSNENPVFYVQYAHARSRGAARNAVAAGVERQVD--------GADSFDASLLDHATEN 468 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ +L YP ++ A +EP+++A +L +A +H + R P + + Sbjct: 469 ELLSYLGSYPSIVAKAAELREPHRVARHLEAIAGAYHRWYDACRIAP---MGEEAVTDVN 525 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L A + ++ +GL+++GV +P M Sbjct: 526 RTRLWLNDATSQVLANGLDLLGVSAPERM 554 >gi|49485481|ref|YP_042702.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476] gi|56749393|sp|Q6GBM1|SYR_STAAS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|49243924|emb|CAG42350.1| putative arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476] Length = 553 Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 197/559 (35%), Positives = 303/559 (54%), Gaps = 41/559 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90 I IE P+D +G +TN AM+L++ +P IA+ IV + + V + IAG GFIN Sbjct: 31 IKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL YL I+ + G ++G KG V +E+VSANPTG +H+GH R A VGD L Sbjct: 91 FYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDAL 150 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+++ +GY VTREYYINDAG QI LA S+ R+ +AL +N +PE Y G + +G Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIG 210 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K+LA+K+ E+ ++ EE L + V+ M +++DL N D + SE + + Sbjct: 211 KDLAEKHP-EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 267 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I +++ + GY YE R+T DD DR L+K+DG+ Sbjct: 268 CEILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 311 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTYF D+AY K +RG D +I + G+DH GY+ RL+A ++ + + ++VR Sbjct: 312 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 371 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L +G +KMSKR G+ ITLR ++DEVG D+ R+ + R DFD KEQS++NP Sbjct: 372 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 431 Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 V+Y QYA+AR SI +QAK ++ DF I E ++L+ +A++ Sbjct: 432 VYYAQYAHARICSILKQAKEQGIEVTAANDF-----TTITNE-----KAIELLKKVADFE 481 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 IE+A + +++ Y+ DLAS FH ++ + V ++ + T + ++ AV Sbjct: 482 PTIESAAEHRSAHRITNYIQDLASHFHKFYNAEK-------VLTDDIEKTKAHVAMIEAV 534 Query: 567 ASIINSGLNIIGVESPNEM 585 + + L ++GV +P M Sbjct: 535 RITLKNALAMVGVSAPESM 553 >gi|78484543|ref|YP_390468.1| arginyl-tRNA synthetase [Thiomicrospira crunogena XCL-2] gi|109895050|sp|Q31J79|SYR_THICR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|78362829|gb|ABB40794.1| arginyl-tRNA synthetase [Thiomicrospira crunogena XCL-2] Length = 592 Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 202/577 (35%), Positives = 320/577 (55%), Gaps = 35/577 (6%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 R+ +E RD +HG +TN AM+L++ +G P +AE+IVAR+ ++ V IAG GFIN Sbjct: 29 RVNVENTRDKSHGDFATNLAMMLTKVVGKPPREVAEMIVARLPESDVIEKVEIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 ++ +L SI+ +G +G +G+G V +E+VSANPTGP+HVGH R A G ++ Sbjct: 89 FFVLDVAKFDVLPSILEAGETFGECNVGQGRSVLVEYVSANPTGPLHVGHGRGAAYGASV 148 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ASL++ +G+ V+REYY+NDAG Q++ LA S + RY Q + P Y G Y+ + Sbjct: 149 ASLLSKAGFRVSREYYVNDAGRQMDILAASTWLRYLQHC-GEELTFPSNGYKGDYIFDIA 207 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN--IQHDIFISEDD---- 264 + L ++ L E + + D A + + D K ++ I+ + D+ Sbjct: 208 QSLYEEKGDALRKPAENVFEGVADDEVTTADGETLGDKEKHIDDLIEKTKVLLGDEHYRV 267 Query: 265 -FHRGDPSPIRDIIDNLARQGYVYE-----------GILPPP--KSKTTQKCDMDRKQLL 310 F + + + DI ++LA G +E G++ K + K + L Sbjct: 268 VFDKALDAILGDIREDLAEFGVEFENWFSERSLMDSGVIDAALEKLQAAGKIYEKKGALW 327 Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 F+S+ GD+ DR +++ +G TYFA+D+AY K ERGFD +I + GSDH GYV R++A Sbjct: 328 FKSSEYGDEKDRVVVRENGLKTYFASDIAYHFNKLERGFDVLIDIWGSDHHGYVPRVKAA 387 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430 A+ + VLL + LYR G + MS R+G F+TLR + DEVG+D+ RF + RK Sbjct: 388 MQALDTNPEALEVLLVQFAVLYRGGEKLAMSTRSGQFVTLRELRDEVGADAARFFYVQRK 447 Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV--IPQE 488 + + +DFD K +S ENPV+Y+QYA+AR + A++ LD ++ N+ + QE Sbjct: 448 SEQHMDFDLDLAKSKSNENPVYYIQYAHARICQVLSLAEERGYQLDTEMGLANLNRLTQE 507 Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548 E D + L LA+YP +I A +A EP+++A+YL +LA H +++ +F+ Sbjct: 508 PEADLATL-----LAKYPEIIARAALAYEPHQIAYYLKELAHGLHAYYN------STQFI 556 Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L RL LV AV ++ +GL ++ V +P +M Sbjct: 557 -VEYEPLRNARLTLVVAVRQVLQNGLKLLSVAAPEKM 592 >gi|148272330|ref|YP_001221891.1| arginyl-tRNA synthetase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830260|emb|CAN01194.1| argS [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 554 Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 193/557 (34%), Positives = 294/557 (52%), Gaps = 35/557 (6%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 D +V+ERPR+ HG +TN AM +++PLG DP TIA I + P V V +AG GFI Sbjct: 32 DMVVLERPRNRDHGDWATNIAMRIAKPLGEDPRTIAADIAEALGELPQVAKVDVAGPGFI 91 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N+ L + + +IV +G YGR G ++N+EFVSANPTGP+H+G R A VGD+ Sbjct: 92 NITLEAAAAGALARTIVDAGPAYGRGHTLDGIRINLEFVSANPTGPIHLGGVRWAAVGDS 151 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 LA ++ G +VTREYY ND G+QI+ A S+ + D PE Y G Y+ + Sbjct: 152 LARILQAEGADVTREYYFNDHGSQIDRFARSLLASHLG------EDTPEDGYGGAYIGEI 205 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 + + Y +L P E+ + + + M I+ L + D+F ED H + Sbjct: 206 AERVVAGYDGDLDALPREEQQEVFRSAGTELMFGEIKQKLHDFGVDFDVFFHEDSLH--E 263 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + + L G+V+E + + R+T GDD DR +++S G Sbjct: 264 SGAVDRAVARLKELGHVFE----------------EDGAVWLRTTTFGDDRDRVVIRSTG 307 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCEL 388 Y + DL Y+ K ERGF+ I ++G+DH GYV R+ A+A A + + +L+ ++ Sbjct: 308 EPAYISGDLGYYLDKRERGFEQNIIMLGADHHGYVGRMMAMAEAFGDTPGVNLQILIGQM 367 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V L RDG P+KMSKRAG +TL +VD VG D+ R+ ++ + LD D + +++ + Sbjct: 368 VNLLRDGEPVKMSKRAGTIVTLDDLVDAVGVDAGRYSLVRSSADQNLDIDLAVLGKRTND 427 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 NPVFYVQYA+AR ++ R A D R+ E +E L+ L E+PR+ Sbjct: 428 NPVFYVQYAHARTCAVDRNAAASGVD-------RSAFAPELLTHPTESALLGLLQEFPRI 480 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 + A +EP+++A Y+ +LA +H + R PR L RL L AV Sbjct: 481 VAQAAELREPHRVARYIEELAGSYHRWYDSCRVVPR---GDEEVTDLHRTRLWLNDAVRQ 537 Query: 569 IINSGLNIIGVESPNEM 585 ++ +GL+++GV +P M Sbjct: 538 VVANGLDLVGVSAPERM 554 >gi|325295274|ref|YP_004281788.1| Arginyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065722|gb|ADY73729.1| Arginyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 546 Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 202/562 (35%), Positives = 315/562 (56%), Gaps = 43/562 (7%) Query: 28 ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87 ++D+ E+P+ +G L+TN + +L++ L P +IA ++ ++ P+ + V +AG G Sbjct: 24 LVDKASFEKPKKREYGDLATNISFLLAKELKQKPFSIANELLKSLESMPEFEKVEVAGGG 83 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FIN + S + IL ++ E+ + IGKG +V +E+VSANPTGP+HVGH R AVVG Sbjct: 84 FINFFFSQRFYTDILKKVLHE--EFYISEIGKGERVLLEYVSANPTGPLHVGHGRGAVVG 141 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D L +M +GY+ RE+YINDAG QI L +S++ R ++ L + PE Y G Y+ Sbjct: 142 DVLYRVMRLTGYKPEREFYINDAGRQIKLLGVSIYARMKE-LSGENYPFPEDGYKGEYII 200 Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 V KEL + E+++ PEE+ + I ++ + +++ IR DLK L ++ D + SE + Sbjct: 201 EVAKELLAE-RPEIISLPEEEAIEIAAEFGKERLLEEIRKDLKDLRVKFDYWFSEKSLY- 258 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 + + I+ L + +YE L ++T+ GDD DR + +S Sbjct: 259 -EKGEVERILKILEEKDLLYE----------------KDGALWLKTTIFGDDKDRVVKRS 301 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387 +G YTYFA+D+AY K ER FD I V G+DH GY+ R++A A+ + + V+L + Sbjct: 302 NGEYTYFASDIAYHYNKIERNFDKAINVWGADHHGYIPRVKAAIQALGKNPDWLEVILIQ 361 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 LV+L+++G +KMSKRAG+F+TLR ++DEVG D+VRF L +++ LDFD Sbjct: 362 LVKLFKNGEEVKMSKRAGNFVTLRWLMDEVGVDAVRFFFLLKRHDTPLDFDIDLALSSKS 421 Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP----QESEFDTSELQLIVHLA 503 ENPV+YVQYA+AR SI +AK+ + +P E E +LI Sbjct: 422 ENPVYYVQYAHARLCSILDKAKE-----------KGFVPSEENLELLSSEEERELIAGCY 470 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 +E +EP++L +YL DLAS H ++ + R + + KL+ RL L+ Sbjct: 471 NLKYELELVAEKREPHRLTYYLIDLASKLHRFYN------KHRVIMEEDPKLSTARLSLI 524 Query: 564 HAVASIINSGLNIIGVESPNEM 585 AV IN GL+I+ V +P M Sbjct: 525 KAVRRTINLGLDILNVTAPRRM 546 >gi|114331591|ref|YP_747813.1| arginyl-tRNA synthetase [Nitrosomonas eutropha C91] gi|122313625|sp|Q0AFN4|SYR_NITEC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|114308605|gb|ABI59848.1| arginyl-tRNA synthetase [Nitrosomonas eutropha C91] Length = 586 Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 208/612 (33%), Positives = 327/612 (53%), Gaps = 65/612 (10%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 DF S L + ++ E+ + I ++RP+ HG STN AM L++ L +PL +A Sbjct: 8 DFRSHCVQLLAQAVKQVLPEETEI-HIELQRPKQMDHGDYSTNLAMKLAKRLRRNPLELA 66 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 ++++ + P V +AG GF+N +L + ++ L +++ + +G + +G G + I Sbjct: 67 KVLIGALPDSPYVGKTVVAGGGFVNFFLKKTAKQQFLLTVLQAADSFGHSKLGAGKTIQI 126 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+HVGH R A G +LA++MA +GY VTRE+Y+NDAG Q++ LALS + RY Sbjct: 127 EFVSANPTGPLHVGHGRGAAFGASLANIMAAAGYAVTREFYVNDAGRQMDILALSTWLRY 186 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKEL----ADKYSSELLNFPEEKWLPIVK------- 234 L P Y G Y+ + E+ D+Y+ + P ++ I Sbjct: 187 LD-LCGIALPFPSNAYQGRYVVDMALEIHRIHGDRYA-HYSDSPTQQLAEINAKAAADGE 244 Query: 235 ----DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290 D + A I+ +D L H+ ++E + D ++L G +E Sbjct: 245 DEYLDNLITAAKSILGEDYAYL---HNFVLTEQ---------LNDCRNDLMEFGVEFENW 292 Query: 291 LPPPK-------SKTTQKCDMDRK-------QLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336 ++ Q D D+K L F+ST GD+ DR + + +G YTYFA+ Sbjct: 293 FSEQSLFDSGMVARAVQLLD-DKKLLYRQDGALWFQSTGFGDEKDRVVQRENGQYTYFAS 351 Query: 337 DLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396 D+AY KYERGFD M+ + G+DH GY+ R++ A+S ++ + L + LYRDG Sbjct: 352 DIAYHLSKYERGFDYMLNIWGADHHGYISRVKGAIEALSLDSDKLEIALVQFAVLYRDGN 411 Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456 I MS R+G+F+TLR + EVG+D+ RF + RK+ + LDFD K QS +NPV+YVQY Sbjct: 412 KISMSTRSGEFVTLRQLRQEVGNDAARFFYVLRKSDQHLDFDLDLAKSQSNDNPVYYVQY 471 Query: 457 AYARCRSIFRQ---AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513 A+AR S+ Q A DIF + +L + +EL L+ + ++P IE A Sbjct: 472 AHARICSVLEQWGGAVDIFGRAETELLT----------NPAELVLLQKIIDFPDTIEAAA 521 Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573 P+ +AF+L +LAS FH +++ RF+ + L + RL L+ AV +++ G Sbjct: 522 KEHAPHLIAFFLRELASEFHSYYN------STRFL-IPDEALKIARLALISAVCQVLSKG 574 Query: 574 LNIIGVESPNEM 585 L+++GV SP +M Sbjct: 575 LSLLGVTSPRKM 586 >gi|258422795|ref|ZP_05685698.1| arginyl-tRNA synthetase [Staphylococcus aureus A9635] gi|257847026|gb|EEV71037.1| arginyl-tRNA synthetase [Staphylococcus aureus A9635] Length = 553 Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 196/559 (35%), Positives = 303/559 (54%), Gaps = 41/559 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90 I IE P+D +G +TN AM+L++ +P IA+ IV + + V + IAG GFIN Sbjct: 31 IKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL YL I+ + G ++G KG V +E+VSANPTG +H+GH R A VGD L Sbjct: 91 FYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDAL 150 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+++ +GY VTREYYINDAG QI LA S+ R+ +AL +N +PE Y G + +G Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIG 210 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K+LA+K+ E+ ++ EE L + V+ M +++DL N D + SE + + Sbjct: 211 KDLAEKHP-EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 267 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I +++ + GY YE R+T DD DR L+K+DG+ Sbjct: 268 GEILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 311 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTYF D+AY K +RG D +I + G+DH GY+ RL+A ++ + + ++VR Sbjct: 312 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 371 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L +G +KMSKR G+ ITLR ++DEVG D+ R+ + R DFD KEQS++NP Sbjct: 372 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 431 Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 V+Y QYA+AR SI +QAK ++ DF I E ++L+ +A++ Sbjct: 432 VYYAQYAHARICSILKQAKEQGIEVTAANDF-----TTITNE-----KAIELLKKVADFE 481 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 IE+A + +++ Y+ DLA+ FH ++ + V ++ + T + ++ AV Sbjct: 482 PTIESAAEHRSAHRITNYIQDLAAHFHKFYNAEK-------VLTDDIEKTKAHIAMIEAV 534 Query: 567 ASIINSGLNIIGVESPNEM 585 + + L ++GV +P M Sbjct: 535 RITLKNALAMVGVSAPESM 553 >gi|298505924|gb|ADI84647.1| arginyl-tRNA synthetase [Geobacter sulfurreducens KN400] Length = 568 Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 202/569 (35%), Positives = 302/569 (53%), Gaps = 52/569 (9%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDSVFIAGKGFIN 90 IV+E+P HG + AAM++++ P IAE+I+ + + V+SV IAG GFIN Sbjct: 37 IVVEKPALEEHGDFACTAAMLMAKAEKKAPRAIAEIIITHLNDRESLVESVEIAGPGFIN 96 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + S ++L I G +YG + G G KV +EFVSANPTGP+H+GH R A +GDT+ Sbjct: 97 FRMRTSAWCRVLRRIEREGGDYGESEAGAGKKVQVEFVSANPTGPLHIGHGRGAAIGDTI 156 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 L+A G++VTRE+Y NDAG QI LALSV R + D P Y G Y+K V Sbjct: 157 CRLLAAIGWDVTREFYYNDAGQQIANLALSVQARC-LGVEPGDPLWPTDGYQGEYIKDVA 215 Query: 211 -----KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 +E D + + + ++ ++V + + DL+A ++ D++ E Sbjct: 216 RSYLNRETVDAGDQHVTAAGDPHDVEAIRRFAVAYLRREQDQDLRAFDVGFDVYFLESSL 275 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 + + D++ + +G+ YE L R+T GDD DR + Sbjct: 276 YA--EGRVDDVVQRIIAKGHAYE----------------QDGALWLRTTEFGDDKDRVMR 317 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--KAQINV 383 KSDGSYTYF D+AY K+ERGF ++ G+DH + R+ A A+ K Sbjct: 318 KSDGSYTYFVPDVAYHLNKWERGFIRVVNEQGADHHSTITRVRAGLQALDAGIPKGWPEY 377 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443 +L ++V + R G +K+SKRAG ++TLR +VDEVG D+ RF L RK L FD K Sbjct: 378 VLHQMVTVMRGGEEVKISKRAGSYVTLRDLVDEVGRDATRFFFLMRKPDSQLVFDIDLAK 437 Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ-------ESEFDTSEL 496 +Q+ ENPV+YVQYA+AR SIF A D + V+P ES EL Sbjct: 438 QQTLENPVYYVQYAHARICSIFENAAD-----------KGVVPPTVDQASLESLGTPEEL 486 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 L+ L+ +P ++E + + EP+++ +YL +LA FH ++ R V + LT Sbjct: 487 TLVKLLSSFPEIVEGSALNFEPHRITYYLQELAGAFHSFYNKNR-------VITEDADLT 539 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L+H+ A++I +GL ++GV +P +M Sbjct: 540 GARLLLLHSTATVIRNGLGLLGVSAPEKM 568 >gi|282928743|ref|ZP_06336338.1| arginyl-tRNA synthetase [Staphylococcus aureus A10102] gi|282589626|gb|EFB94713.1| arginyl-tRNA synthetase [Staphylococcus aureus A10102] Length = 553 Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 196/559 (35%), Positives = 303/559 (54%), Gaps = 41/559 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90 I IE P+D +G +TN AM+L++ +P IA+ IV + + V + IAG GFIN Sbjct: 31 IKIEVPKDTKNGDYATNIAMVLTKIAKRNPCEIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL YL I+ + G ++G KG V +E+VSANPTG +H+GH R A VGD L Sbjct: 91 FYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDAL 150 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+++ +GY VTREYYINDAG QI LA S+ R+ +AL +N +PE Y G + +G Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIG 210 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K+LA+K+ E+ ++ EE L + V+ M +++DL N D + SE + + Sbjct: 211 KDLAEKHP-EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 267 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I +++ + GY YE R+T DD DR L+K+DG+ Sbjct: 268 GEILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 311 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTYF D+AY K +RG D +I + G+DH GY+ RL+A ++ + + ++VR Sbjct: 312 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 371 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L +G +KMSKR G+ ITLR ++DEVG D+ R+ + R DFD KEQS++NP Sbjct: 372 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 431 Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 V+Y QYA+AR SI +QAK ++ DF I E ++L+ +A++ Sbjct: 432 VYYAQYAHARICSILKQAKEQGIEVTAANDF-----TTITNE-----KAIELLKKVADFE 481 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 IE+A + +++ Y+ DLA+ FH ++ + V ++ + T + ++ AV Sbjct: 482 PTIESAAEHRSAHRITNYIQDLAAHFHKFYNAEK-------VLTDDIEKTKAHVAMIEAV 534 Query: 567 ASIINSGLNIIGVESPNEM 585 + + L ++GV +P M Sbjct: 535 RITLKNALAMVGVSAPESM 553 >gi|325963846|ref|YP_004241752.1| arginyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3] gi|323469933|gb|ADX73618.1| arginyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3] Length = 554 Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 205/587 (34%), Positives = 318/587 (54%), Gaps = 50/587 (8%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 S+ LK+ + D + + D + +ERP++ HG +TN A+ L++ G +P A Sbjct: 10 ISACLKDAVAAGDIALPA-SAVPDEVRVERPKNRDHGDWATNIALQLAKQAGTNPREFAT 68 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 ++ R+K V +V IAG GF+N+ + + + +IV +G EYG N G VN+E Sbjct: 69 VLSTRLKAIEGVAAVDIAGPGFLNITVDAAAAGALAKAIVEAGKEYGTNSALAGHTVNME 128 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+H+GH R A +GD++A ++ SG +VT EYYINDAG Q+N A SV+ R Sbjct: 129 FVSANPTGPLHIGHTRWAALGDSIARVLRASGADVTAEYYINDAGTQMNVFAHSVYNRLH 188 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 +P+G YPG Y+ +G E+ ++ ++ E +P+++ + QA MK I+ Sbjct: 189 GL------PVPDGGYPGQYIADLGHEVLAEH-PDIRELTEVAAVPVIRAAAYQAQMKDIK 241 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 L ++ D+F SE + H D I + L QG+V++ D Sbjct: 242 STLADFGVEFDVFFSEQELH--DAGAIESAVARLREQGHVFD----------------DG 283 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366 + R+T GDD DR L++++G TYFAAD AY+ K +RGF IY++G+DH GY+ R Sbjct: 284 GAVWLRTTDFGDDKDRVLIRANGEPTYFAADAAYYLSKKDRGFTEKIYLLGADHHGYINR 343 Query: 367 LEAVAAAVSEK-KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425 L+A+AAA + + I VL+ +LV + +G K+SKRAG+ I L+ ++D +G D+VR+ Sbjct: 344 LKAIAAAAGDDPEVHIEVLIGQLVSV--NGA--KLSKRAGNIIELKDLIDWLGKDAVRYS 399 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 + L D +K+ S ENPVFYVQYA+AR R R A D D Sbjct: 400 LARFPADSPLTLDPELLKKHSNENPVFYVQYAHARSRGAARNAVAAGVDRQVD------- 452 Query: 486 PQESEFDTS------ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + FD S E +L+ +L YP ++ A +EP+++A +L +A +H + Sbjct: 453 -GKDSFDASLLDHATENELLSYLGSYPSIVAKAAELREPHRVARHLEVIAGAYHRWYDAC 511 Query: 540 RENPRL-RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R P V NR RL L A + ++ +GL+++GV +P M Sbjct: 512 RIAPMGDEAVTDVNR----TRLWLNDATSQVLANGLDLLGVSAPERM 554 >gi|167772363|ref|ZP_02444416.1| hypothetical protein ANACOL_03740 [Anaerotruncus colihominis DSM 17241] gi|167665466|gb|EDS09596.1| hypothetical protein ANACOL_03740 [Anaerotruncus colihominis DSM 17241] Length = 564 Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 194/567 (34%), Positives = 305/567 (53%), Gaps = 47/567 (8%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSVFIAGKG 87 L V+E P D +HG ++N AM +RP P IAE I A + + V + V IAG G Sbjct: 35 LPDFVVEIPADTSHGDFASNIAMACARPFKCAPRKIAEAICAALDLTGTVFERVEIAGPG 94 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FIN +LSP + ++ S++ +G +YGR G+G KV +EFVSANPTGPMH+G+ R +G Sbjct: 95 FINFFLSPRWFADVVKSVLSAGADYGRTDYGRGEKVQVEFVSANPTGPMHMGNARGGALG 154 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYL 206 D LA+ + +SG+ VTRE+Y+NDAG QI S+ RY Q D+ PE Y G + Sbjct: 155 DCLAAALDWSGHNVTREFYVNDAGNQIEKFGCSLEARYLQIFKGEDAVAFPEDGYHGDDI 214 Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 + ++ AD++ + + D+++ ++ ++ DL+ I +D++ E + H Sbjct: 215 RERAQQFADQFGDRFVESDSAARRQALVDFALPRNIEKLKADLERYRIHYDVWFRESELH 274 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 G I + I L +G YE L +R+T G + D L++ Sbjct: 275 HG---AIDEAIRVLTARGMTYE----------------QDGALWYRATENGGEKDEVLVR 315 Query: 327 SDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 ++G TYFAAD+AY K+ RGF+ +I V G+DH G+V RL+ A+ +++++L Sbjct: 316 ANGFPTYFAADIAYHYNKFAVRGFERVINVWGADHHGHVARLKGAMDAIGLNGDRLDIVL 375 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 + VRL +DG P+KMSKR G I+L +++EV D+ RF+ R+ + ++DFD EQ Sbjct: 376 MQFVRLMQDGKPVKMSKRTGKAISLTDLIEEVPVDAARFLFNMREPNSMVDFDLDLAVEQ 435 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT-------SELQL 498 S +NPV+YVQYA+AR S+ ++ +D V P+ +D E++L Sbjct: 436 SMQNPVYYVQYAHARICSLLKKLED-----------EGVAPRACTYDELCALRAPEEIEL 484 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 I LA +P+ I ++ +P +L Y DLA+VFH H++ R V+ L Sbjct: 485 IRTLARFPQEIIDSVRGYDPARLTKYATDLATVFHKHYTVHR-------VRGEAEPLMQA 537 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 RL L A ++I + L ++ + P M Sbjct: 538 RLNLYLATRTVIANVLGMLKITVPESM 564 >gi|315443349|ref|YP_004076228.1| arginyl-tRNA synthetase [Mycobacterium sp. Spyr1] gi|315261652|gb|ADT98393.1| arginyl-tRNA synthetase [Mycobacterium sp. Spyr1] Length = 550 Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 194/586 (33%), Positives = 301/586 (51%), Gaps = 44/586 (7%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LK + + ++ L D + +ERPR+ HG +TN A+ L + +G +P Sbjct: 4 ADLAQLLKATAAAVLAEHGLDSAALPDTVTVERPRNPEHGDYATNLALQLGKKVGANPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + + + +AG GF+NL + S ++S+++ +G +YG + + G KV Sbjct: 64 LAGWLAEALAASDGIAAADVAGPGFVNLRIEASAQNVMVSNVLSAGADYGHSAVLAGKKV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L+ G VTREYY ND GAQI+ + S+ Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGAAVTREYYFNDHGAQIDRFSNSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + ++ K +L+ P+++ + V M Sbjct: 184 AAKG------EPAPEDGYAGTYIADIASQVVAKEPG-VLDQPDDRMRETFRAIGVNMMFD 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I++ L D++ ED H + ID L G+ YE Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMHTS--GRVEQAIDKLRETGFAYE--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 + R+T GDD DR ++KSDG Y A DLAYF K +RGFD IY++G+DH GY Sbjct: 280 -KDGAVWLRTTDFGDDKDRVVIKSDGKPAYIAGDLAYFLDKRKRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA+ + + VL+ ++V L RDG P++MSKRAG ITL +V+ +G D+ R Sbjct: 339 IARLKASAAALGDDPDTVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D S ENPV+YVQYA+AR ++ R A ++ Sbjct: 399 YSLIRSSVDTPIDIDLELWSSASNENPVYYVQYAHARLSALARNAAEL-----------G 447 Query: 484 VIPQESEFD----TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + P + D E LI ++ E+PR++ A +EP++++ YL DLA +H + Sbjct: 448 IAPDTAHLDLLTHDKEGVLIRNIGEFPRILATAAELREPHRVSRYLEDLAGDYHRFYDAC 507 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R P+ + L RL L A +I +GL+I+GV +P M Sbjct: 508 RVLPQGDEAPGD---LHAARLALCAATRQVIANGLDILGVSAPERM 550 >gi|15926285|ref|NP_373818.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315] gi|148267067|ref|YP_001246010.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9] gi|150393115|ref|YP_001315790.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1] gi|257793189|ref|ZP_05642168.1| arginyl-tRNA synthetase [Staphylococcus aureus A9781] gi|258407674|ref|ZP_05680809.1| arginyl-tRNA synthetase [Staphylococcus aureus A9763] gi|258420362|ref|ZP_05683307.1| arginyl-tRNA synthetase [Staphylococcus aureus A9719] gi|258436509|ref|ZP_05689167.1| arginyl-tRNA synthetase [Staphylococcus aureus A9299] gi|258442357|ref|ZP_05691120.1| arginyl-tRNA synthetase [Staphylococcus aureus A8115] gi|258446271|ref|ZP_05694429.1| arginyl-tRNA synthetase [Staphylococcus aureus A6300] gi|258450070|ref|ZP_05698167.1| arginyl-tRNA synthetase [Staphylococcus aureus A6224] gi|258455109|ref|ZP_05703071.1| arginyl-tRNA synthetase [Staphylococcus aureus A5937] gi|269202229|ref|YP_003281498.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98] gi|282895046|ref|ZP_06303268.1| arginyl-tRNA synthetase [Staphylococcus aureus A8117] gi|295406988|ref|ZP_06816791.1| arginyl-tRNA synthetase [Staphylococcus aureus A8819] gi|296276963|ref|ZP_06859470.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1] gi|297246149|ref|ZP_06930004.1| arginyl-tRNA synthetase [Staphylococcus aureus A8796] gi|21542256|sp|Q99W05|SYR_STAAN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|189083551|sp|A6TZ85|SYR_STAA2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|189083552|sp|A5IQG1|SYR_STAA9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|13700499|dbj|BAB41796.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315] gi|147740136|gb|ABQ48434.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9] gi|149945567|gb|ABR51503.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1] gi|257787161|gb|EEV25501.1| arginyl-tRNA synthetase [Staphylococcus aureus A9781] gi|257840754|gb|EEV65212.1| arginyl-tRNA synthetase [Staphylococcus aureus A9763] gi|257843676|gb|EEV68080.1| arginyl-tRNA synthetase [Staphylococcus aureus A9719] gi|257848780|gb|EEV72766.1| arginyl-tRNA synthetase [Staphylococcus aureus A9299] gi|257852086|gb|EEV76018.1| arginyl-tRNA synthetase [Staphylococcus aureus A8115] gi|257854865|gb|EEV77810.1| arginyl-tRNA synthetase [Staphylococcus aureus A6300] gi|257856689|gb|EEV79593.1| arginyl-tRNA synthetase [Staphylococcus aureus A6224] gi|257862749|gb|EEV85515.1| arginyl-tRNA synthetase [Staphylococcus aureus A5937] gi|262074519|gb|ACY10492.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98] gi|282762629|gb|EFC02767.1| arginyl-tRNA synthetase [Staphylococcus aureus A8117] gi|285816308|gb|ADC36795.1| Arginyl-tRNA synthetase [Staphylococcus aureus 04-02981] gi|294968219|gb|EFG44245.1| arginyl-tRNA synthetase [Staphylococcus aureus A8819] gi|297176995|gb|EFH36251.1| arginyl-tRNA synthetase [Staphylococcus aureus A8796] gi|315128881|gb|EFT84879.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03] gi|329724382|gb|EGG60893.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172] Length = 553 Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 196/559 (35%), Positives = 303/559 (54%), Gaps = 41/559 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90 I IE P+D +G +TN AM+L++ +P IA+ IV + + V + IAG GFIN Sbjct: 31 IKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL YL I+ + G ++G KG V +E+VSANPTG +H+GH R A VGD L Sbjct: 91 FYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDAL 150 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+++ +GY VTREYYINDAG QI LA S+ R+ +AL +N +PE Y G + +G Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIG 210 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K+LA+K+ E+ ++ EE L + V+ M +++DL N D + SE + + Sbjct: 211 KDLAEKHP-EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 267 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I +++ + GY YE R+T DD DR L+K+DG+ Sbjct: 268 GEILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 311 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTYF D+AY K +RG D +I + G+DH GY+ RL+A ++ + + ++VR Sbjct: 312 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 371 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L +G +KMSKR G+ ITLR ++DEVG D+ R+ + R DFD KEQS++NP Sbjct: 372 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 431 Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 V+Y QYA+AR SI +QAK ++ DF I E ++L+ +A++ Sbjct: 432 VYYAQYAHARICSILKQAKEQGIEVTAANDF-----TTITNE-----KAIELLKKVADFE 481 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 IE+A + +++ Y+ DLA+ FH ++ + V ++ + T + ++ AV Sbjct: 482 PTIESAAEHRSAHRITNYIQDLAAHFHKFYNAEK-------VLTDDIEKTKAHVAMIEAV 534 Query: 567 ASIINSGLNIIGVESPNEM 585 + + L ++GV +P M Sbjct: 535 RITLKNALAMVGVSAPESM 553 >gi|256380151|ref|YP_003103811.1| arginyl-tRNA synthetase [Actinosynnema mirum DSM 43827] gi|255924454|gb|ACU39965.1| arginyl-tRNA synthetase [Actinosynnema mirum DSM 43827] Length = 550 Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 193/557 (34%), Positives = 293/557 (52%), Gaps = 41/557 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + IERPR+ HG +TN A+ ++ G P A + + + + V +AG GF+NL Sbjct: 32 VTIERPRNPEHGDYATNVALQTAKKAGTSPREFATWLAEALTSNDALSEVTVAGPGFLNL 91 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+P I+ I+ G ++GR+ + G ++N+EFVSANPTGP+H+G R A GD L Sbjct: 92 RLAPDAQAAIVREIITKGEDFGRSDLLAGRRINLEFVSANPTGPLHLGGTRWAATGDALG 151 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++A SG +VTREYY NDAGAQI+ S+ + PE Y G Y+ + Sbjct: 152 RVLAASGADVTREYYFNDAGAQIDRFVRSLIAAAKG------EPAPEDGYAGSYISDIAA 205 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 E+ + L E + + V M I+ DL D+F ED H+ Sbjct: 206 EVLRQEPDALT---AEDGPEVFRRIGVNLMFDEIKRDLHDFGTDFDVFFHEDSLHK---- 258 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 G V + K K + K + RST GDD DR ++KSDG+ Sbjct: 259 -----------SGAVTTAV---EKLKGSDKLYFENGAWWLRSTEFGDDKDRVVIKSDGAP 304 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 Y A D+AY K RGFD IY++G+DH GY+ RL+A AAA+ + + VL+ ++V L Sbjct: 305 AYIAGDIAYLVDKRSRGFDLCIYMLGADHHGYIGRLKAAAAALGDDPDSVEVLIGQMVNL 364 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 DG P++MSKRAG+ I++ +VD VG D+ RF M+ +D D ++++S ENPV Sbjct: 365 VSDGKPVRMSKRAGNIISMEDLVDAVGVDAARFAMIRASVDSSVDIDLDLLRKRSSENPV 424 Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511 +YVQYA++R S+ R A+ + + + L ++ E+E LI L E+PRV++ Sbjct: 425 YYVQYAHSRICSVLRNAEALKVEANDSL---QLLDSEAEG-----TLIRALGEFPRVVKA 476 Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM---RLQLVHAVAS 568 A +EP+++A YL+ LA H + H P LR + + + T + RL+L A Sbjct: 477 AAELREPHRVATYLHSLAGDLHRWYDH---KPALRILPRGDEEPTELHGARLRLCQATQR 533 Query: 569 IINSGLNIIGVESPNEM 585 + +GL ++GV +P M Sbjct: 534 VFANGLALLGVTAPERM 550 >gi|145222884|ref|YP_001133562.1| arginyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK] gi|189083540|sp|A4T8M4|SYR_MYCGI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|145215370|gb|ABP44774.1| arginyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK] Length = 550 Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 194/586 (33%), Positives = 301/586 (51%), Gaps = 44/586 (7%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LK + + ++ L D + +ERPR+ HG +TN A+ L + +G +P Sbjct: 4 ADLAQLLKATAAAVLAEHGLDSAALPDTVTVERPRNPEHGDYATNLALQLGKKVGANPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + + + +AG GF+NL + S ++S+++ +G +YG + + G KV Sbjct: 64 LAGWLAEALAASDGIAAADVAGPGFVNLRIEASAQNVMVSNVLSAGADYGHSAVLAGKKV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L+ G VTREYY ND GAQI+ + S+ Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGAAVTREYYFNDHGAQIDRFSNSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + ++ K +L+ P+++ + V M Sbjct: 184 AAKG------EPAPEDGYAGTYIADIASQVVAKEPG-VLDQPDDRMRETFRAIGVNLMFD 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I++ L D++ ED H + ID L G+ YE Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMHTS--GRVEQAIDKLRETGFAYE--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 + R+T GDD DR ++KSDG Y A DLAYF K +RGFD IY++G+DH GY Sbjct: 280 -KDGAVWLRTTDFGDDKDRVVIKSDGKPAYIAGDLAYFLDKRKRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA+ + + VL+ ++V L RDG P++MSKRAG ITL +V+ +G D+ R Sbjct: 339 IARLKASAAALGDDPDTVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D S ENPV+YVQYA+AR ++ R A ++ Sbjct: 399 YSLIRSSVDTPIDIDLELWSSASNENPVYYVQYAHARLSALARNAAEL-----------G 447 Query: 484 VIPQESEFD----TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + P + D E LI ++ E+PR++ A +EP++++ YL DLA +H + Sbjct: 448 IAPDTAHLDLLTHDKEGVLIRNIGEFPRILATAAELREPHRVSRYLEDLAGDYHRFYDAC 507 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R P+ + L RL L A +I +GL+I+GV +P M Sbjct: 508 RVLPQGDEAPGD---LHAARLALCAATRQVIANGLDILGVSAPERM 550 >gi|253731229|ref|ZP_04865394.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253724970|gb|EES93699.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|329729647|gb|EGG66048.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193] Length = 553 Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 196/559 (35%), Positives = 303/559 (54%), Gaps = 41/559 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90 I IE P+D +G +TN AM+L++ +P IA+ IV + + V + IAG GFIN Sbjct: 31 IKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL YL I+ + G ++G KG V +E+VSANPTG +H+GH R A VGD L Sbjct: 91 FYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDAL 150 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+++ +GY VTREYYINDAG QI LA S+ R+ +AL +N +PE Y G + +G Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIG 210 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K+LA+K+ E+ ++ EE L + V+ M +++DL N D + SE + + Sbjct: 211 KDLAEKHP-EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 267 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I +++ + GY YE R+T DD DR L+K+DG+ Sbjct: 268 GEILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 311 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTYF D+AY K +RG D +I + G+DH GY+ RL+A ++ + + ++VR Sbjct: 312 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 371 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L +G +KMSKR G+ ITLR ++DEVG D+ R+ + R DFD KEQS++NP Sbjct: 372 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 431 Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 V+Y QYA+AR SI +QAK ++ DF I E ++L+ +A++ Sbjct: 432 VYYAQYAHARICSILKQAKEQGIEVAAANDF-----TTITNE-----KAIELLKKVADFE 481 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 IE+A + +++ Y+ DLA+ FH ++ + V ++ + T + ++ AV Sbjct: 482 PTIESAAEHRSAHRITNYIQDLAAHFHKFYNAEK-------VLTDDIEKTKAHVAMIEAV 534 Query: 567 ASIINSGLNIIGVESPNEM 585 + + L ++GV +P M Sbjct: 535 RITLKNALAMVGVSAPESM 553 >gi|312829102|emb|CBX33944.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R 2] Length = 553 Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 196/559 (35%), Positives = 303/559 (54%), Gaps = 41/559 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90 I IE P+D +G +TN AM+L++ +P IA+ IV + + V + IAG GFIN Sbjct: 31 IKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL YL I+ + G ++G KG V +E+VSANPTG +H+GH R A VGD L Sbjct: 91 FYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDAL 150 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+++ +GY VTREYYINDAG QI LA S+ R+ +AL +N +PE Y G + +G Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIG 210 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K+LA+K+ E+ ++ EE L + V+ M +++DL N D + SE + + Sbjct: 211 KDLAEKHP-EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 267 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I +++ + GY YE R+T DD DR L+K+DG+ Sbjct: 268 GGILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 311 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTYF D+AY K +RG D +I + G+DH GY+ RL+A ++ + + ++VR Sbjct: 312 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 371 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L +G +KMSKR G+ ITLR ++DEVG D+ R+ + R DFD KEQS++NP Sbjct: 372 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 431 Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 V+Y QYA+AR SI +QAK ++ DF I E ++L+ +A++ Sbjct: 432 VYYAQYAHARICSILKQAKEQGIEVTAANDF-----TTITNE-----KAIELLKKVADFE 481 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 IE+A + +++ Y+ DLA+ FH ++ + V ++ + T + ++ AV Sbjct: 482 PTIESAAEHRSAHRITNYIQDLAAHFHKFYNAEK-------VLTDDIEKTKAHVAMIEAV 534 Query: 567 ASIINSGLNIIGVESPNEM 585 + + L ++GV +P M Sbjct: 535 RITLKNALAMVGVSAPESM 553 >gi|296170233|ref|ZP_06851826.1| arginine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895109|gb|EFG74827.1| arginine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 550 Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 203/593 (34%), Positives = 304/593 (51%), Gaps = 58/593 (9%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + L+ + + ++ L V +ERPR+ HG ++N A+ L + +G++P Sbjct: 4 ADLAELLRTTASAVLAEHSLDAAALPATVTVERPRNPEHGDYASNLALQLGKKVGVNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + A + V S +AG GFINL L S KI++++V +G +G + G K+ Sbjct: 64 LAGWLAAAVSQADGVASAEVAGPGFINLRLEASAQAKIVNAVVDAGDGFGHSDALAGHKI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L++ G V REYY ND GAQI+ A S+ Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGAAVEREYYFNDHGAQIDRFASSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + ++ K + + L+ PE + + V M Sbjct: 184 AAKG------EATPEDGYAGAYINDIAAQVLAK-APDALSLPEAEMRETFRAIGVDLMFT 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I++ L D++ ED H + I L G +YE Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMHT--SGRVDQAIARLRETGNIYE--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 D L R++ GDD DR ++KSDG Y A D+AY+ K +RGFD IY++G+DH GY Sbjct: 280 KDGASWL-RTSAFGDDKDRVVIKSDGKPAYIAGDIAYYLDKRQRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+AVAAA + A + VL+ ++V L RDG P++MSKRAG ITL +V+ +G D+ R Sbjct: 339 IARLKAVAAAFGDDPAHVEVLIGQMVNLVRDGAPVRMSKRAGTVITLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D S ENPV+YVQYA+AR ++ R A ++ Sbjct: 399 YSLIRSSVDTPIDIDLALWSSASNENPVYYVQYAHARLSALARNAAEL-----------G 447 Query: 484 VIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 V+P DT L+L+ H + E+PRV++ A +EP+++ YL DLA +H Sbjct: 448 VVP-----DTGHLELLSHDKEGTLLRSIGEFPRVLKTAASLREPHRVCRYLEDLAGDYHR 502 Query: 535 HWSHGRENPRLRFVQANNR--KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R P Q + R L RL L A +I +GL I+GV +P M Sbjct: 503 FYDSCRVLP-----QGDERPTDLHAARLALCEATRQVIANGLTILGVTAPERM 550 >gi|300088120|ref|YP_003758642.1| arginyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527853|gb|ADJ26321.1| arginyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 557 Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 198/557 (35%), Positives = 316/557 (56%), Gaps = 38/557 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + +E P++ HG +++ + ++R G+ PL IA IV I P++ SV +A GFIN Sbjct: 36 VGVEHPQNTGHGDYASSLPLKMARATGMKPLDIAAAIVEFIPEIPEIKSVAVAPPGFINF 95 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 LS ++ + + +++ +G YG G G V +E+VSANPTGP+HVGH R AV+G TLA Sbjct: 96 TLSDGWIIEQVEAVIKTGDTYGCIDTGAGRTVQLEYVSANPTGPIHVGHGRGAVLGSTLA 155 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP-EGYYPGVYLKHVG 210 + +GY+V +E+Y+NDAG QI + S+ RY QAL D+++P EGY+ G Y+ + Sbjct: 156 RALQAAGYKVQQEFYVNDAGNQIASFKRSLRARYLQAL-GRDAEMPAEGYF-GRYMTDLA 213 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD-FHRGD 269 ++A ++ N E++ L + ++ M+ +IRDDL L + D + SE F G+ Sbjct: 214 GDIAAEHGDAFANLTEDEALEKLGAIGLERMLGVIRDDLSGLGVNFDRWFSERSLFESGE 273 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 +ID L + GY+ E + F ST +G++ D +++SDG Sbjct: 274 ---YEAVIDRLKQSGYITE----------------KEGAVWFASTALGENKDNVIVRSDG 314 Query: 330 SYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 + TYFA+D+AY K+ +RGFD +I + G+DH G+V R++AV A+ ++++++ +L Sbjct: 315 TPTYFASDIAYHYDKFVKRGFDKVINIWGADHQGHVSRMKAVLQALDIDPERLHIIIAQL 374 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V L R +++SKR GD ITLR V+DEVG+D+ RF L R +DFD K+QS + Sbjct: 375 VTLRRGEELVRLSKRTGDMITLREVLDEVGADACRFNFLARGADSQMDFDLELAKKQSAD 434 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 NPV+YVQYA+AR SI A + D R V P +EL+L+ + P V Sbjct: 435 NPVYYVQYAHARICSIIELAAERGIDYHAGDVTRLVEP-------AELELLRKMLLLPEV 487 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 I T EP+ LA+Y LA+ FH + R V +++ L+ RL+L++A Sbjct: 488 IAQVTETLEPHHLAYYAQVLATAFHAFYKDCR-------VVSDDLCLSQARLKLMYAARR 540 Query: 569 IINSGLNIIGVESPNEM 585 ++ L ++G+ +P++M Sbjct: 541 VLARTLELMGMSAPDKM 557 >gi|283469905|emb|CAQ49116.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398] Length = 553 Score = 330 bits (847), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 196/559 (35%), Positives = 302/559 (54%), Gaps = 41/559 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90 I IE P+D +G +TN AM+L++ +P IA+ IV + + V + IAG GFIN Sbjct: 31 IKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL YL I+ + G ++G KG + +E+VSANPTG +H+GH R A VGD L Sbjct: 91 FYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNILLEYVSANPTGDLHIGHARNAAVGDAL 150 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+++ +GY VTREYYINDAG QI LA S+ R+ +AL +N +PE Y G + +G Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIG 210 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K+LA+K+ E+ ++ EE L + V+ M +++DL N D + SE + + Sbjct: 211 KDLAEKHP-EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 267 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I +++ + GY YE R+T DD DR L+K+DG+ Sbjct: 268 GEILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 311 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTYF D+AY K +RG D +I + G+DH GY+ RL+A ++ + + ++VR Sbjct: 312 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 371 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L +G +KMSKR G+ ITLR ++DEVG D+ R+ + R DFD KEQS++NP Sbjct: 372 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 431 Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 V+Y QYA+AR SI +QAK ++ DF I E ++L+ +A++ Sbjct: 432 VYYAQYAHARICSILKQAKEQGIEVAAANDF-----TTITNE-----KAIELLKKVADFE 481 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 IE+A + +++ Y+ DLAS FH ++ + V ++ T + ++ AV Sbjct: 482 PTIESAAEHRSAHRITNYIQDLASHFHKFYNAEK-------VLTDDIVKTKAHVAMIEAV 534 Query: 567 ASIINSGLNIIGVESPNEM 585 + + L ++GV +P M Sbjct: 535 RITLKNALAMVGVSAPESM 553 >gi|297570951|ref|YP_003696725.1| arginyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595] gi|296931298|gb|ADH92106.1| arginyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595] Length = 557 Score = 330 bits (846), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 188/573 (32%), Positives = 305/573 (53%), Gaps = 39/573 (6%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD 77 + I ++ + L + +ERPR HG +TN AM L + G++P A+L+V ++ DP Sbjct: 19 VAGTIALDPETLPEVRVERPRVREHGDWATNVAMQLGKKAGMNPREFAQLVVDKLIEDPG 78 Query: 78 VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMH 137 VD IAG GFIN+ ++ + ++ +I+ G +G KG +N+E+VSANPTGP+H Sbjct: 79 VDHADIAGPGFINITVNAAVAGELARTILEKGEAFGLGESLKGDVINLEYVSANPTGPIH 138 Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP 197 +G R A VGD+LA ++ SG V REYY ND G+QI+ A S+ R + + P Sbjct: 139 IGGARWAAVGDSLARILEASGARVIREYYFNDHGSQIDRFAKSLLARARGL------EAP 192 Query: 198 EGYYPGVYLKHVGKELADKYS--SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255 E Y G Y++ + + + ++ S S+ L +E+ +++ V M I+ +L ++ Sbjct: 193 EDGYGGQYIEDIARAVLEEKSNGSDPLALADEQAQEFFREHGVTRMFGEIKKELADFRVE 252 Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315 D++ ED H + + ID+L +G +YE RST Sbjct: 253 FDVYFHEDSLH--ESGAVNQAIDDLRNKGVIYE----------------QDGATWLRSTD 294 Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375 GDD DR ++KSDG YFA D+AY+ K ERG D++I ++G+DH GY+ R+ A+A A Sbjct: 295 FGDDKDRVIIKSDGDAAYFAGDIAYYLNKRERGADHVIIMLGADHHGYIGRMYAMARAFG 354 Query: 376 E---KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 + K + +L+ +LV L +DG P++MSKRAG + L +VD G D+ R+ ++ Sbjct: 355 DTAGKGENLELLIGQLVNLVQDGQPVRMSKRAGTIVVLSDLVDAAGVDAARYSLVRAAMD 414 Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492 L+ D + ++ ENPV+YVQYA+AR +S+ A R V Sbjct: 415 TTLEIDLGLISSRTNENPVYYVQYAHARTKSVDANAAS-------HGVTREVFTPALLDS 467 Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552 ++ +LI LA++P ++ + +EP+++A YL +LA +H + R PR Sbjct: 468 AADSELIAKLAQFPEIVAQSAQLREPHRVARYLEELAGAYHAWYGASRVTPR---ADEEV 524 Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L RL L A ++ +GL+++GV +P +M Sbjct: 525 SDLHRTRLWLNDAAGQVLANGLSLLGVSAPEKM 557 >gi|82750314|ref|YP_416055.1| arginyl-tRNA synthetase [Staphylococcus aureus RF122] gi|109895039|sp|Q2YSW8|SYR_STAAB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|82655845|emb|CAI80247.1| arginyl-tRNA synthetase [Staphylococcus aureus RF122] Length = 553 Score = 330 bits (846), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 197/559 (35%), Positives = 302/559 (54%), Gaps = 41/559 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90 I IE P+D +G +TN AM+L++ +P IA+ IV + + V + IAG GFIN Sbjct: 31 IKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL YL I+ + G ++G KG V +E+VSANPTG +H+GH R A VGD L Sbjct: 91 FYLDNQYLTAIIPEAIEKGDQFGYVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDAL 150 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+++ +GY VTREYYINDAG QI LA S+ R+ +AL +N +PE Y G + +G Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIG 210 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K+LA+K E+ ++ EE L + V+ M +++DL N D + SE + + Sbjct: 211 KDLAEK-RPEIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 267 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I +++ + GY YE R+T DD DR L+K+DG+ Sbjct: 268 GEILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 311 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTYF D+AY K +RG D +I + G+DH GY+ RL+A ++ + + ++VR Sbjct: 312 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 371 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L +G +KMSKR G+ ITLR ++DEVG D+ R+ + R DFD KEQS++NP Sbjct: 372 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 431 Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 V+Y QYA+AR SI +QAK ++ DF I E ++L+ +A++ Sbjct: 432 VYYAQYAHARICSILKQAKEQGIEVAAANDF-----TTITNE-----KAIELLKKVADFE 481 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 IE+A + +++ Y+ DLAS FH ++ + V ++ + T + ++ AV Sbjct: 482 PTIESAAEHRSAHRITNYIQDLASHFHKFYNAEK-------VLTDDIEKTKAHVAMIEAV 534 Query: 567 ASIINSGLNIIGVESPNEM 585 + + L ++GV +P M Sbjct: 535 RITLKNALAMVGVSAPESM 553 >gi|302332319|gb|ADL22512.1| putative arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JKD6159] Length = 553 Score = 330 bits (846), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 196/559 (35%), Positives = 303/559 (54%), Gaps = 41/559 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90 I IE P+D +G +TN AM+L++ +P IA+ IV + + V + IAG GFIN Sbjct: 31 IKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL YL I+ + G ++G KG V +E+VSANPTG +H+GH R A VGD L Sbjct: 91 FYLDNQYLTAIIPEAIEKGDQFGYVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDAL 150 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+++ +GY VTREYYINDAG QI LA S+ R+ +AL +N +PE Y G + +G Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIG 210 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K+LA+K+ E+ ++ EE L + V+ M +++DL N D + SE + + Sbjct: 211 KDLAEKHP-EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 267 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I +++ + GY YE R+T DD DR L+K+DG+ Sbjct: 268 GEILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 311 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTYF D+AY K +RG D +I + G+DH GY+ RL+A ++ + + ++VR Sbjct: 312 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 371 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L +G +KMSKR G+ ITLR ++DEVG D+ R+ + R DFD KEQS++NP Sbjct: 372 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 431 Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 V+Y QYA+AR SI +QAK ++ DF I E ++L+ +A++ Sbjct: 432 VYYAQYAHARICSILKQAKEQGIEVTAANDF-----TTITNE-----KAIELLKKVADFE 481 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 IE+A + +++ Y+ DLA+ FH ++ + V ++ + T + ++ AV Sbjct: 482 PTIESAAEHRSAHRITNYIQDLAAHFHKFYNAEK-------VLTDDIEKTKAHVAMIEAV 534 Query: 567 ASIINSGLNIIGVESPNEM 585 + + L ++GV +P M Sbjct: 535 RITLKNALAMVGVSAPESM 553 >gi|194364058|ref|YP_002026668.1| arginyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3] gi|238693501|sp|B4STE2|SYR_STRM5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|194346862|gb|ACF49985.1| arginyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3] Length = 562 Score = 330 bits (846), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 201/562 (35%), Positives = 306/562 (54%), Gaps = 40/562 (7%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 V+ERP+ HG +TNAAM+L++ +P +A+ +V + DV V IAG GFIN Y Sbjct: 32 VVERPKTRDHGDFATNAAMLLAKAARSNPRALAQALVEALPRSEDVSKVEIAGPGFINFY 91 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L+P+ ++ +S++ G +YGRNL G G V +E+VSANPTGP+HVGH R A +GD +A Sbjct: 92 LAPAAYQREAASVIKEGHDYGRNLSGNGRTVGVEYVSANPTGPLHVGHGRAAAIGDCVAR 151 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 ++ +G+ RE+Y NDAG QI L+LSV R + + D PEG Y G Y+ V + Sbjct: 152 VLDANGWNAKREFYYNDAGVQIENLSLSVQARVKGIAPDQDG-WPEGGYRGEYIADVARA 210 Query: 213 LADKYSSEL-----LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 S +L + + K + ++ ++V + DL A + DI+ E + Sbjct: 211 YMAGASVDLEGTLVVGAKDAKDMQAIRRFAVAYLRNEQNLDLAAFGVDFDIYFLESSLYA 270 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 + + + L G+ YE + L RST GDD DR + KS Sbjct: 271 --DGKVAEAVAKLQASGHTYE----------------EGGALWLRSTDFGDDKDRVMRKS 312 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLL 385 DG++TYF D+AY K++RG++ I +G+DH G + R+ A A V + +L Sbjct: 313 DGTFTYFVPDVAYHLSKWQRGYERAITELGADHHGSLARVRAGLQAMEVGIPQGWPEYVL 372 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 ++V + R G +K+SKRAG + TLR +++E G D+ R+ ++ RK L FD ++Q Sbjct: 373 HQMVTVMRGGEEVKLSKRAGSYFTLRDLIEEAGRDATRWFLIARKPDSQLTFDIDLARQQ 432 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAE 504 S +NPVFYVQYA+AR S+ RQA++ L ++ N + D + L L+ ++ Sbjct: 433 SNDNPVFYVQYAHARVCSLLRQAQE--KGLVYE--QGNGLANLGRLSDDASLLLMNEISR 488 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN-NRKLTMMRLQLV 563 YP V+E A +A EP+ +A YL +LA FH W HG P L A+ N KLT L Sbjct: 489 YPEVVEAAGVALEPHLVAQYLRELAHAFH-TWYHG--TPVLVDDSADRNAKLT-----LA 540 Query: 564 HAVASIINSGLNIIGVESPNEM 585 A ++ +GL ++GV +P +M Sbjct: 541 CAARQVLANGLELLGVSAPEKM 562 >gi|39996911|ref|NP_952862.1| arginyl-tRNA synthetase [Geobacter sulfurreducens PCA] gi|39983799|gb|AAR35189.1| arginyl-tRNA synthetase [Geobacter sulfurreducens PCA] Length = 568 Score = 330 bits (846), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 201/569 (35%), Positives = 302/569 (53%), Gaps = 52/569 (9%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDSVFIAGKGFIN 90 IV+E+P HG + AAM++++ P IAE+I+ + + V+SV IAG GFIN Sbjct: 37 IVVEKPALEEHGDFACTAAMLMAKAEKKAPRAIAEIIITHLNDRESLVESVEIAGPGFIN 96 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + S ++L I G +YG++ G G KV +EFVSANPTGP+H+GH R A +GDT+ Sbjct: 97 FRMRTSAWCRVLRRIEREGGDYGKSEAGAGKKVQVEFVSANPTGPLHIGHGRGAAIGDTI 156 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 L+A G++VTRE+Y NDAG QI LALSV R + P Y G Y+K V Sbjct: 157 CRLLAAIGWDVTREFYYNDAGQQIANLALSVQARC-LGVEPGGPLWPTDGYQGEYIKDVA 215 Query: 211 -----KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 +E D + + + ++ ++V + + DL+A ++ D++ E Sbjct: 216 RSYLNRETVDAGDQHVTAAGDPHDVEAIRRFAVAYLRREQDQDLRAFDVGFDVYFLESSL 275 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 + + D++ + +G+ YE L R+T GDD DR + Sbjct: 276 YA--EGRVDDVVQRIIAKGHAYE----------------QDGALWLRTTEFGDDKDRVMR 317 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--KAQINV 383 KSDGSYTYF D+AY K+ERGF ++ G+DH + R+ A A+ K Sbjct: 318 KSDGSYTYFVPDVAYHLNKWERGFIRVVNEQGADHHSTITRVRAGLQALDAGIPKGWPEY 377 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443 +L ++V + R G +K+SKRAG ++TLR +VDEVG D+ RF L RK L FD K Sbjct: 378 VLHQMVTVMRGGEEVKISKRAGSYVTLRDLVDEVGRDATRFFFLMRKPDSQLVFDIDLAK 437 Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ-------ESEFDTSEL 496 +Q+ ENPV+YVQYA+AR SIF A D + V+P ES EL Sbjct: 438 QQTLENPVYYVQYAHARICSIFENAAD-----------KGVVPPTVDQASLESLGTPEEL 486 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 L+ L+ +P ++E + + EP+++ +YL +LA FH ++ R V + LT Sbjct: 487 TLVKLLSSFPEIVEGSALNFEPHRITYYLQELAGAFHSFYNKNR-------VITEDADLT 539 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L+H+ A++I +GL ++GV +P +M Sbjct: 540 GARLLLLHSTATVIRNGLGLLGVSAPEKM 568 >gi|326771976|ref|ZP_08231261.1| arginine--tRNA ligase [Actinomyces viscosus C505] gi|326638109|gb|EGE39010.1| arginine--tRNA ligase [Actinomyces viscosus C505] Length = 561 Score = 330 bits (845), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 194/563 (34%), Positives = 302/563 (53%), Gaps = 47/563 (8%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +ERPR+ HG STN AM L++ G P +AEL+V R++ + SV +AG GF+N+ L Sbjct: 35 VERPRNRDHGDWSTNVAMQLAKKAGTKPRDLAELLVPRLEALDGIASVEVAGPGFLNIRL 94 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + ++ SIV +G YGRN G +N+E+VSANPTGP+H+G R A VGD+LA + Sbjct: 95 DAASAGELARSIVEAGEAYGRNDSLSGQHINLEYVSANPTGPVHLGGARWAAVGDSLARI 154 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 ++ G +VTREYY ND G QI+ A S+ + + PE Y G Y+ + +++ Sbjct: 155 LSACGAQVTREYYFNDHGTQIDRFARSLLASAR------GQETPEDGYGGAYISEIAQQV 208 Query: 214 -ADKYSS---ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 AD+ ++ + P+ + + + V M ++ +L A D+F ED H Sbjct: 209 TADELAAGRPDPATLPDAEATEVFRSRGVDLMFAAVKAELHAFRSDFDVFFHEDSLHTS- 267 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + I L +G + E + T R+T GDD DR L+KSDG Sbjct: 268 -GAVERAIARLRERGVIEE------RDGAT----------WLRTTDFGDDKDRVLIKSDG 310 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCEL 388 + YFAADLAY+ K ERG D IY++G+DH GY+ R+ A+ AA + + +L+ +L Sbjct: 311 NAAYFAADLAYYLDKRERGADCAIYLLGADHHGYIGRMMAMCAAFGDTPGTNMQILIGQL 370 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V L R+G+P++MSKRAG +TL +VD VG D+ R+ + ++D D + + + Sbjct: 371 VNLVRNGVPVRMSKRAGTIVTLEDLVDAVGVDAARYALARSSMDSMIDIDLDLLTSSTSD 430 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF------DTSELQLIVHL 502 NPV+YVQYA+AR R++ R A + D P E+ F D ++ L+ L Sbjct: 431 NPVYYVQYAHARTRNVARNAAEHGVSRD---------PNEAPFEPGALDDPADTALLGVL 481 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 A++P + A +E +++A YL LA+ +H + R PR + + RL L Sbjct: 482 AQFPATVAQAAQLREQHRVARYLEQLAAAYHAWYGATRVTPRGDDAVDSGH---VARLWL 538 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 AV ++ +GL+++GV +P M Sbjct: 539 NDAVGQVLANGLDLLGVSAPERM 561 >gi|109894995|sp|Q74C63|SYR_GEOSL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS Length = 561 Score = 329 bits (844), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 201/569 (35%), Positives = 302/569 (53%), Gaps = 52/569 (9%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDSVFIAGKGFIN 90 IV+E+P HG + AAM++++ P IAE+I+ + + V+SV IAG GFIN Sbjct: 30 IVVEKPALEEHGDFACTAAMLMAKAEKKAPRAIAEIIITHLNDRESLVESVEIAGPGFIN 89 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + S ++L I G +YG++ G G KV +EFVSANPTGP+H+GH R A +GDT+ Sbjct: 90 FRMRTSAWCRVLRRIEREGGDYGKSEAGAGKKVQVEFVSANPTGPLHIGHGRGAAIGDTI 149 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 L+A G++VTRE+Y NDAG QI LALSV R + P Y G Y+K V Sbjct: 150 CRLLAAIGWDVTREFYYNDAGQQIANLALSVQARC-LGVEPGGPLWPTDGYQGEYIKDVA 208 Query: 211 -----KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 +E D + + + ++ ++V + + DL+A ++ D++ E Sbjct: 209 RSYLNRETVDAGDQHVTAAGDPHDVEAIRRFAVAYLRREQDQDLRAFDVGFDVYFLESSL 268 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 + + D++ + +G+ YE L R+T GDD DR + Sbjct: 269 YA--EGRVDDVVQRIIAKGHAYE----------------QDGALWLRTTEFGDDKDRVMR 310 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--KAQINV 383 KSDGSYTYF D+AY K+ERGF ++ G+DH + R+ A A+ K Sbjct: 311 KSDGSYTYFVPDVAYHLNKWERGFIRVVNEQGADHHSTITRVRAGLQALDAGIPKGWPEY 370 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443 +L ++V + R G +K+SKRAG ++TLR +VDEVG D+ RF L RK L FD K Sbjct: 371 VLHQMVTVMRGGEEVKISKRAGSYVTLRDLVDEVGRDATRFFFLMRKPDSQLVFDIDLAK 430 Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ-------ESEFDTSEL 496 +Q+ ENPV+YVQYA+AR SIF A D + V+P ES EL Sbjct: 431 QQTLENPVYYVQYAHARICSIFENAAD-----------KGVVPPTVDQASLESLGTPEEL 479 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 L+ L+ +P ++E + + EP+++ +YL +LA FH ++ R V + LT Sbjct: 480 TLVKLLSSFPEIVEGSALNFEPHRITYYLQELAGAFHSFYNKNR-------VITEDADLT 532 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L+H+ A++I +GL ++GV +P +M Sbjct: 533 GARLLLLHSTATVIRNGLGLLGVSAPEKM 561 >gi|116671171|ref|YP_832104.1| arginyl-tRNA synthetase [Arthrobacter sp. FB24] gi|116611280|gb|ABK04004.1| arginyl-tRNA synthetase [Arthrobacter sp. FB24] Length = 554 Score = 329 bits (844), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 193/561 (34%), Positives = 310/561 (55%), Gaps = 39/561 (6%) Query: 28 ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87 + D + +ERP++ HG +TN A+ LS+ G++P A ++ R+ V +V IAG G Sbjct: 30 VPDEVRVERPKNRDHGDWATNIALQLSKQAGVNPREFATVLSTRLATIDGVSAVDIAGPG 89 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 F+N+ + + + +IV +G EYG N G VN+EFVSANPTGP+H+GH R A +G Sbjct: 90 FLNITVDAAAAGALAKAIVEAGPEYGTNSALAGHVVNMEFVSANPTGPLHIGHTRWAALG 149 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D++A ++ SG +VT EYYINDAG+Q+N A SV R +PEG YPG Y+ Sbjct: 150 DSIARVLRASGAKVTAEYYINDAGSQMNVFARSVLSRLH------GRGVPEGGYPGEYIS 203 Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 +G + ++ ++ + LP+++ + +A MK I+D L + D++ SE + H Sbjct: 204 ELGHHVLTEH-PDIRELTDVAALPVIRGAAYKAQMKDIKDTLADFGVAFDVYFSEQELH- 261 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 D I + L QG+V++ D + R+T GDD DR ++++ Sbjct: 262 -DAGAIESAVARLREQGHVFD----------------DGGAVWLRTTDFGDDKDRVMIRA 304 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK-KAQINVLLC 386 +G TYFAAD AY+ K +RGFD IY++G+DH GY+ RL+A+AAA + +A I VL+ Sbjct: 305 NGEPTYFAADAAYYLSKKDRGFDQKIYLLGADHHGYINRLKAIAAAAGDDPEANIEVLIG 364 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446 +LV + +G K+SKRAG+ I L+ ++ +G D+VR+ + L D +K+ S Sbjct: 365 QLVSV--NGA--KLSKRAGNIIELKDLISWLGKDAVRYSLARFPADSPLTLDPELLKKHS 420 Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 ENPVFYVQYA+AR R R A + ++ + ++ +E +L+ +L YP Sbjct: 421 NENPVFYVQYAHARSRGTARNA--VAAGVERRVDGKDAFDASLLDHATENELLSYLGSYP 478 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN--RKLTMMRLQLVH 564 ++ A +EP+++A +L +A +H + R P Q + + RL L Sbjct: 479 SIVAKAAELREPHRVARHLEVIAGAYHRWYDACRVAP-----QGDEPITDVNRTRLWLND 533 Query: 565 AVASIINSGLNIIGVESPNEM 585 A + ++ +GL ++GV +P M Sbjct: 534 ATSQVLANGLELLGVSAPERM 554 >gi|148264350|ref|YP_001231056.1| arginyl-tRNA synthetase [Geobacter uraniireducens Rf4] gi|189083535|sp|A5G3W5|SYR_GEOUR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|146397850|gb|ABQ26483.1| arginyl-tRNA synthetase [Geobacter uraniireducens Rf4] Length = 561 Score = 329 bits (844), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 197/569 (34%), Positives = 307/569 (53%), Gaps = 44/569 (7%) Query: 28 ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF-IAGK 86 + IVIE+P HG +TN AM+L++ P +AE++V+R++ D+ S +AG Sbjct: 26 VFPSIVIEKPAHAEHGDFATNVAMLLAKAEKKAPRVVAEILVSRLQESADICSKLEVAGP 85 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GFIN Y+ R+ L +I + +YG++ IG+G K+ +EFVSANPTGP+H+GH R A + Sbjct: 86 GFINFYVKDEAWRQTLIAIDRACADYGKSRIGEGKKIQVEFVSANPTGPLHIGHGRGAAI 145 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206 GDT+ L+A G++VTRE+Y NDAG QI LALSV R + +D P Y G Y+ Sbjct: 146 GDTICRLLAAIGWDVTREFYYNDAGQQIANLALSVQARC-LGIEPDDPRWPLDGYQGDYI 204 Query: 207 KHV-----GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 + V G+E + + + + L ++ ++V + + DL A ++ D++ Sbjct: 205 RDVARSYLGQETVEADDQHVTAAGDPQDLDAIRRFAVAYLRREQDQDLTAFDVHFDVYSL 264 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E + + ++ L G+ YE L R+T GDD D Sbjct: 265 ESALYA--EGRVEAVVQRLIDSGHTYE----------------QDGALWLRTTTFGDDKD 306 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381 R + K+DG YTYF D+AY K+ERGF +I G+DH + R+ A A++ A I Sbjct: 307 RVMRKADGGYTYFVPDVAYHLSKWERGFTRVINEQGADHHSTITRVRAGLQALN---AGI 363 Query: 382 NV-----LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 V +L ++V + R G +K+SKRAG ++TLR ++DEVG D+ RF + RK L Sbjct: 364 PVGWPEYVLHQMVTVMRGGEEVKISKRAGSYVTLRDLIDEVGRDATRFFFVMRKPDSQLV 423 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD K+Q+ +NPV+YVQYA+AR SIF A + F L +P E E+ Sbjct: 424 FDIDLAKQQTLDNPVYYVQYAHARICSIFENAL----ERGFVLPAAESVPLERLVTLEEM 479 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +I LA +P ++E + + EP+++ +YL +LA FH ++ R V + +LT Sbjct: 480 TIIKTLASFPEILEGSALNFEPHRVTYYLQELAGQFHSFYNRNR-------VITEDAELT 532 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L+ VA + + L ++G+ +P +M Sbjct: 533 AARLFLLKCVALTLKNALTVLGISAPEKM 561 >gi|297539933|ref|YP_003675702.1| arginyl-tRNA synthetase [Methylotenera sp. 301] gi|297259280|gb|ADI31125.1| arginyl-tRNA synthetase [Methylotenera sp. 301] Length = 551 Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 194/562 (34%), Positives = 305/562 (54%), Gaps = 42/562 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I++ERP+ HG +TN A++L++PL +P IA I+ + + IAG GFIN Sbjct: 24 ILLERPKSAEHGDFATNLALVLAKPLKQNPRAIAAQIIEALPASDYIAKTEIAGAGFINF 83 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +L+ + +++ I+ +G YGRN IG G KV +EFVSANPTGP+HVGH R A VGD LA Sbjct: 84 FLNAQSQQAVVTDILKAGENYGRNNIGSGQKVQLEFVSANPTGPLHVGHGRGAAVGDCLA 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 L+ +G++VTRE+Y NDAGAQI+ L +SV R + + +D+ PE Y G Y+ + Sbjct: 144 RLLDANGWDVTREFYYNDAGAQIDNLTISVLARC-KGIPTDDASFPENGYRGDYIMDIAN 202 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQ----AMMKIIRD-DLKALNIQHDIFISEDDFH 266 +K + + I + +V+ A ++ +D DLKA I+ D+F E + Sbjct: 203 AFLNKETVTADDMQVTANGDITDEDAVRTFAVAYLRHEQDLDLKAFQIKFDVFSLESALY 262 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 + + + L + G+ Y D+D L ++T GDD DR + K Sbjct: 263 --SEGKVEETVQALIKSGHTY---------------DLD-GALWLKTTDFGDDKDRVMRK 304 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--KAQINVL 384 S+G YTYF D+AY K++RGF +I G+DH + R+ A A+ + + Sbjct: 305 SEGGYTYFVPDVAYHAEKWKRGFVRVINEQGADHHSTITRVRAGLQALDAGIPSGWPDYV 364 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L ++V + R G +K+SKRAG ++TLR +++EVG D+ R+ + R++ L FD + Sbjct: 365 LHQMVTVMRGGEEVKLSKRAGSYVTLRDLIEEVGCDATRYFLAARRSDSQLVFDIDLARA 424 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNVIPQESEFDTSELQLIVHLA 503 Q+ +NPVFY+QYA+AR S+ Q + L D DL P N + E L+ L+ Sbjct: 425 QTNDNPVFYIQYAHARICSVLAQWGGVAAQLNDVDLSPLN--------NPHETALMQRLS 476 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 YP + NA P+ +A YL DLAS H +++ +F+ + + + RL L+ Sbjct: 477 SYPETVANAATELAPHVIANYLKDLASDLHSYYN------EYKFL-IEDETVKLARLSLI 529 Query: 564 HAVASIINSGLNIIGVESPNEM 585 A ++ +GL ++GV +P +M Sbjct: 530 SATQQVLKNGLGLLGVSAPEKM 551 >gi|54023014|ref|YP_117256.1| arginyl-tRNA synthetase [Nocardia farcinica IFM 10152] gi|81375821|sp|Q5Z0Z9|SYR_NOCFA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|54014522|dbj|BAD55892.1| putative arginyl-tRNA synthetase [Nocardia farcinica IFM 10152] Length = 552 Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 198/588 (33%), Positives = 310/588 (52%), Gaps = 46/588 (7%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + L+ ++ + ++ +L D + +ERPR+ HG +TN AM +++ G +P Sbjct: 4 ADLADLLRATAAKVLAERGLDPAVLPDEVTVERPRNPEHGDYATNLAMKVAKKAGTNPRD 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + + S +AG GF+N+ L+ + +L ++ +G YG +GTK+ Sbjct: 64 LAGWLAEALGAADGITSAEVAGPGFLNIRLAAAAQGAVLEQVLAAGSGYGTADTLRGTKI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L ++A G +VTREYY ND GAQI+ A S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWASVGDALGRILAAQGADVTREYYFNDHGAQIDRFANSLV- 182 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 P+ Y G Y+ + +++ ++ E P ++ + + V+ M Sbjct: 183 -----AAATGQPTPDDGYAGAYIGEIAEQIVAEHP-EAPTLPADQRHELFRAEGVELMFA 236 Query: 244 IIRDDLKALNIQHDIFISEDD-FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 I+ L D++ +E F G + ++ L G +YE Sbjct: 237 HIKRTLHEFGTDFDVYFNESTLFASG---AVEQAVETLKASGDLYE-------------- 279 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 S+ GDD DR ++KSDG+ Y A D+AYF+ K RGFD IY++G+DH G Sbjct: 280 --KDGAWWIASSEYGDDQDRVVIKSDGNAAYIAGDIAYFQNKRSRGFDLCIYMLGADHHG 337 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 Y+ RL+A AAA + A + VL+ ++V L RDG +KMSKRAG +TL +V+ +G D+ Sbjct: 338 YIGRLKAAAAAFGDDPATVEVLIGQMVNLVRDGQAVKMSKRAGTVVTLDDLVEAIGVDAA 397 Query: 423 RFMML-WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 R+ ++ W NS + D D Q ENPV+YVQYA+AR SI R A FD Sbjct: 398 RYALVRWSVNSSV-DIDLNLWTSQKNENPVYYVQYAHARTASIGRNAA------AFDY-- 448 Query: 482 RNVIPQESEFDTSEL-QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 +V P S+ E +LI + EYPRV+ +A +EP+++A YL +LA +H + Sbjct: 449 ASVTPDLSQLTAEEEGELIRTIGEYPRVVASAASLREPHRVARYLEELAGAYH----RFQ 504 Query: 541 ENPRLRFVQANN---RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N +LR + + L RL LV+A ++ +GL ++GV +P +M Sbjct: 505 TNSKLRVLPLGDDPVSPLNAARLVLVNATRQVLANGLALLGVSAPEQM 552 >gi|51891157|ref|YP_073848.1| arginyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863] gi|81389886|sp|Q67TI9|SYR_SYMTH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|51854846|dbj|BAD39004.1| arginyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863] Length = 558 Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 193/561 (34%), Positives = 311/561 (55%), Gaps = 44/561 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90 + +E P+ HG +TN AM+++R P IA+ IV ++ + ++S IAG GFIN Sbjct: 35 VFLETPKAREHGDFATNLAMVMARQEKKAPRVIAQAIVDHLQTEGTWIESAEIAGPGFIN 94 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 L L ++ ++L +I G +YG++ G ++ +E+VSANPTGPM + R G +L Sbjct: 95 LRLRQGWVHQVLPAIQAEGADYGKSDHGGKQRILLEYVSANPTGPMVLVQARAGAFGSSL 154 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A L+ ++GYE E+Y+NDAG Q+ LA +V R Q+ L ++PEGYYPG + Sbjct: 155 ARLLNWAGYECHTEFYVNDAGNQVKILARTVDLRAQE-LRGATVEIPEGYYPGEDVIDCA 213 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 + L ++Y + L PEE+ L ++ ++ + L++ ++ D + SE R Sbjct: 214 RALLEQYP-DFLEKPEEERLAFLERWAPEYFRSGHERVLRSYGVEFDRWFSERSL-REAG 271 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 +P R +++ L +G YE + R+T GDD DR L+KSDG Sbjct: 272 APAR-LVEWLKERGEAYE----------------KDGAVWMRTTAYGDDKDRVLVKSDGE 314 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTYFAAD Y K KY+RG+ +I ++G DH GY+ R++A+ + + + +L ++VR Sbjct: 315 YTYFAADACYHKDKYDRGYATLIDILGQDHHGYLGRMKAMVECLGHPRDSLEILFTQMVR 374 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L++DG +MSKR G+++TL ++++V D+ R+ L R +DFD +S +NP Sbjct: 375 LFKDGQEFRMSKRRGNYVTLEDLLEQVSVDAARYFFLMRSLDTHMDFDLDLANLKSSDNP 434 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT------SELQLIVHLAE 504 VFYVQYA+AR SI RQA++ + +P SE DT SE++L+ LAE Sbjct: 435 VFYVQYAHARICSILRQAREQGLE----------VPAASEVDTALLADESEVELMRKLAE 484 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 +P I A A+E +++ YL +LA++FH +S R V +++ L+ RL LV Sbjct: 485 FPEEIIGAADAREVHRIPRYLNELATLFHQFYSRCR-------VVSDDVPLSRARLLLVD 537 Query: 565 AVASIINSGLNIIGVESPNEM 585 +++ + L I+GV +P M Sbjct: 538 CTRTVLANALGILGVSAPERM 558 >gi|15923597|ref|NP_371131.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50] gi|156978936|ref|YP_001441195.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3] gi|255005401|ref|ZP_05144002.2| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|21542255|sp|Q932F6|SYR_STAAM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|166232846|sp|A7WZ56|SYR_STAA1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|14246375|dbj|BAB56769.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50] gi|156721071|dbj|BAF77488.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3] Length = 553 Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 195/559 (34%), Positives = 302/559 (54%), Gaps = 41/559 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90 I IE P+D +G +TN AM+L++ +P IA+ IV + + V + IAG GFIN Sbjct: 31 IKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL YL I+ + G ++G KG V +E+VSANPTG +H+GH R A VGD L Sbjct: 91 FYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDAL 150 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+++ +GY VTREYYINDAG QI LA S+ + +AL +N +PE Y G + +G Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETHFFEALGDNSYSMPEDGYNGKDIIEIG 210 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K+LA+K+ E+ ++ EE L + V+ M +++DL N D + SE + + Sbjct: 211 KDLAEKHP-EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 267 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I +++ + GY YE R+T DD DR L+K+DG+ Sbjct: 268 GEILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 311 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTYF D+AY K +RG D +I + G+DH GY+ RL+A ++ + + ++VR Sbjct: 312 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 371 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L +G +KMSKR G+ ITLR ++DEVG D+ R+ + R DFD KEQS++NP Sbjct: 372 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 431 Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 V+Y QYA+AR SI +QAK ++ DF I E ++L+ +A++ Sbjct: 432 VYYAQYAHARICSILKQAKEQGIEVTAANDF-----TTITNE-----KAIELLKKVADFE 481 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 IE+A + +++ Y+ DLA+ FH ++ + V ++ + T + ++ AV Sbjct: 482 PTIESAAEHRSAHRITNYIQDLAAHFHKFYNAEK-------VLTDDIEKTKAHVAMIEAV 534 Query: 567 ASIINSGLNIIGVESPNEM 585 + + L ++GV +P M Sbjct: 535 RITLKNALAMVGVSAPESM 553 >gi|240169522|ref|ZP_04748181.1| arginyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478] Length = 550 Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 198/591 (33%), Positives = 305/591 (51%), Gaps = 54/591 (9%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LK + + ++ L + V +ERPR+ HG ++N A+ L++ +G++P Sbjct: 4 ADLAELLKATAAAVLAEHGLDTSALPQTVLVERPRNPEHGDYASNLALQLAKKVGVNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + A + + S +AG GFINL L S +I++S++ +G +G + + G K+ Sbjct: 64 LAGWLAAALTKADGIASAEVAGPGFINLRLETSAQAQIVNSVIDAGDHFGHSDLLAGQKI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L+ G +V REYY ND GAQI+ A S+ Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGADVVREYYFNDHGAQIDRFANSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + P Y G Y+ + + +K + + L+ P+ + ++ V M Sbjct: 184 AAK------GEPTPADGYAGSYITDIAAHVLEK-APDALSLPDPEMRETFREIGVDLMFA 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I++ L D++ ED H + I L G +Y+ K T Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMHT--TGRVDQAIARLRETGNIYQ------KDGAT---- 284 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 R++ GDD DR ++KSDG Y A DLAY+ K +RGFD IY++G+DH GY Sbjct: 285 ------WLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL++ AAA E A + VL+ ++V L RDG P++MSKRAG ITL +V+ +G D+ R Sbjct: 339 IARLKSAAAAFGEDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEALGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D S ENPV+YVQYA+AR ++ R A ++ Sbjct: 399 YSLIRSSVDTAIDIDLALWSSASNENPVYYVQYAHARLSALARNAAEL-----------G 447 Query: 484 VIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 +IP DT+ L+L+ H + E+PRV+E A +EP+++ YL DLA +H Sbjct: 448 LIP-----DTAHLELLSHDKEGKLLRTIGEFPRVLETAAALREPHRVCRYLEDLAGDYHR 502 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R P+ L RL L A +I +GL I+GV +P M Sbjct: 503 FYDSCRVLPQ---GDEQPTDLHRARLALCQATRQVIANGLAILGVTAPERM 550 >gi|269794308|ref|YP_003313763.1| arginyl-tRNA synthetase [Sanguibacter keddieii DSM 10542] gi|269096493|gb|ACZ20929.1| arginyl-tRNA synthetase [Sanguibacter keddieii DSM 10542] Length = 559 Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 192/567 (33%), Positives = 295/567 (52%), Gaps = 50/567 (8%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 ++I++ERPR HG +TN A+ L++ G P +A+ + R P V SV +AG GF+ Sbjct: 32 EQILVERPRQREHGDWATNIALQLAKKAGTQPRALADDLAVRFAETPGVKSVAVAGPGFL 91 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N+ L + ++ +++ G YGR + G KVN+EFVSANPTGP+H+G R A VGD+ Sbjct: 92 NITLDAAAAGELARTVIDQGAGYGRGVAEAGKKVNLEFVSANPTGPIHIGGVRWAAVGDS 151 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 LA ++ +G EVTREYY ND GAQI+ + S+ R + D PE Y G Y++ + Sbjct: 152 LARVLEAAGAEVTREYYFNDHGAQIDRFSRSLLARAKG------EDAPEDGYGGQYIQDI 205 Query: 210 GKELADKY----SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 + + L P+E+ + + V M I+ L + D++ ED Sbjct: 206 ADAVLADVAAAGGPDPLTLPDEEAQEVFRSIGVDRMFTEIKAALHGFGVDFDVYFHEDTL 265 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 H + + I L G+++E R+T GDD DR ++ Sbjct: 266 H--ETGAVDRAIARLKDSGHMFEA----------------DGATWLRTTDFGDDKDRVVI 307 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVL 384 KSDG Y A D+AY+ K ERG D +I ++G+DH GYV R+ AV AA ++ + +L Sbjct: 308 KSDGQAAYIAGDIAYYLDKRERGADEVIIMLGADHHGYVGRMMAVCAAFGDQPGTNLQIL 367 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 + ++V L +DG P++MSKRAG +TL +VD VG D+ R+ ++ LD D + + Sbjct: 368 IGQMVNLLKDGEPLRMSKRAGTVVTLEDLVDAVGVDAARYSLVRSSTDSSLDIDLDLLSK 427 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS------ELQL 498 + ENPV+YVQYA+AR ++ R A D + + +E FD S E L Sbjct: 428 ATNENPVYYVQYAHARTANVARNAAD------------HGVRREDAFDPSLLTAETESAL 475 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 + L E+PRVI A +EP+++A YL LA +H ++ R P + + Sbjct: 476 LGSLTEFPRVIAQAAELREPHRVARYLEALAGAYHKWYADVRVTPVGDEEIGDTHR---T 532 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 RL L A ++ +GL ++GV +P M Sbjct: 533 RLWLNDATRQVLANGLALLGVSAPERM 559 >gi|167036620|ref|YP_001664198.1| arginyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320115047|ref|YP_004185206.1| arginyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166855454|gb|ABY93862.1| arginyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319928138|gb|ADV78823.1| arginyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 562 Score = 328 bits (841), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 197/548 (35%), Positives = 305/548 (55%), Gaps = 36/548 (6%) Query: 42 HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD---VDSVFIAGKGFINLYLSPSYL 98 HG L+ N AM++++ + P IAE+IV+ K+DP ++ + IAG GFIN +L +L Sbjct: 47 HGDLAINTAMVIAKQAKMPPKKIAEIIVS--KMDPSNTFIEKIEIAGPGFINFFLKDKFL 104 Query: 99 RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158 + L + G +YGR IG G KV +EFVSANPTGPMH+G+ R +GD LA+++ ++G Sbjct: 105 EETLKLVYERGKDYGRVNIGNGKKVQVEFVSANPTGPMHMGNARGGALGDALAAVLDYAG 164 Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218 Y+VTRE+YINDAG QI S+ RY Q L +++PEG Y G + +E + Y Sbjct: 165 YDVTREFYINDAGNQIEKFGYSLEARYLQ-LLGIPAEVPEGGYQGEDIIDRAREFLEIYG 223 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 + + P E + DY ++ ++ I++DL I++D++ SE + D + +I+ Sbjct: 224 DKYKDVPSEVRRKALIDYGLKKNLEKIKEDLALYGIEYDVWFSEQSLY--DSGEVYKVIE 281 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 L ++GY YE L F+ T+ G + D L++++G TY A+D+ Sbjct: 282 ELKQKGYTYE----------------KDGALWFKMTLFGAEKDDVLVRTNGFPTYLASDI 325 Query: 339 AYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397 AY K K+ RGFD +I V G+DH G+V ++ A+ +++V+L +LV+L G Sbjct: 326 AYHKNKFITRGFDWVINVWGADHHGHVAPMKGAMQALGIDPDRLDVVLMQLVKLIEGGQV 385 Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457 +KMSKR G +TLR ++DEVG D+ RF R +DFD KEQS ENPVFYVQYA Sbjct: 386 VKMSKRTGRMVTLRDLIDEVGKDAARFFFNMRSADSSIDFDLDLAKEQSNENPVFYVQYA 445 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 +AR SI RQ ++ +D + + + E +LI LA +P I A Sbjct: 446 HARICSIIRQLEEEGVKID----NIDEVDLSLLKEEEEKELIKKLAYFPEEITIAAKTLA 501 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 P+++ Y+ D+AS+FH ++ R V+ L R L+ AV ++I + L+I+ Sbjct: 502 PHRITRYILDVASLFHSFYNSHR-------VKGVEEDLMKARFVLILAVKTVIKNALDIL 554 Query: 578 GVESPNEM 585 + +P M Sbjct: 555 KITAPERM 562 >gi|326390823|ref|ZP_08212375.1| arginyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200] gi|325993082|gb|EGD51522.1| arginyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200] Length = 562 Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 199/550 (36%), Positives = 307/550 (55%), Gaps = 40/550 (7%) Query: 42 HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD---VDSVFIAGKGFINLYLSPSYL 98 HG L+ N AM++++ + P IAE+IV+ K+DP ++ + IAG GFIN +L +L Sbjct: 47 HGDLAINTAMVMAKQAKMPPKKIAEIIVS--KMDPSNTFIERIEIAGPGFINFFLKDKFL 104 Query: 99 RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158 + L + G +YGR IG G KV +EFVSANPTGPMH+G+ R +GD LAS++ ++G Sbjct: 105 EETLKLVYERGKDYGRVNIGNGKKVQVEFVSANPTGPMHMGNARGGALGDALASVLDYAG 164 Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218 Y+VTRE+YINDAG QI S+ RY Q L +++PEG Y G + +E + Y Sbjct: 165 YDVTREFYINDAGNQIEKFGYSLEARYLQ-LLGIPAEVPEGGYHGEDIIDRAREFLEIYG 223 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 + + P E+ + +Y ++ ++ I++DL I++D++ SE + D + +I+ Sbjct: 224 DKYKDVPSEERRKALIEYGLKKNLEKIKEDLALYGIEYDVWFSEQSLY--DSGEVYKVIE 281 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 L ++GY YE L F+ T+ G + D L++S+G TY A+D+ Sbjct: 282 ELKQKGYTYE----------------KDGALWFKMTLFGAEKDDVLVRSNGFPTYLASDI 325 Query: 339 AYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397 AY K K+ RGFD +I V G+DH G+V ++ A+ +++V+L +LV+L G Sbjct: 326 AYHKNKFITRGFDWVINVWGADHHGHVAPMKGAMQALGIDPDRLDVVLMQLVKLIEGGQV 385 Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457 +KMSKR G +TLR ++DEVG D+ RF R +DFD KEQS ENPVFYVQYA Sbjct: 386 VKMSKRTGRMVTLRDLIDEVGKDAARFFFNLRSADSPIDFDLDLAKEQSNENPVFYVQYA 445 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNV--IPQESEFDTSELQLIVHLAEYPRVIENATIA 515 +AR SI RQ ++ +D N+ + + E +LI LA +P I A Sbjct: 446 HARICSIIRQLEEEGVKID------NIDEVDLSLLKEEEEKELIKKLAYFPEEITIAAKT 499 Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575 P+++ Y+ D+AS+FH ++ R V+ L R L+ AV ++I + L+ Sbjct: 500 LAPHRITRYVLDVASLFHSFYNSHR-------VKGVEEDLMKARFVLILAVKTVIKNALD 552 Query: 576 IIGVESPNEM 585 I+ + +P M Sbjct: 553 ILKITAPERM 562 >gi|294792712|ref|ZP_06757859.1| arginine--tRNA ligase [Veillonella sp. 6_1_27] gi|294794463|ref|ZP_06759599.1| arginine--tRNA ligase [Veillonella sp. 3_1_44] gi|294454793|gb|EFG23166.1| arginine--tRNA ligase [Veillonella sp. 3_1_44] gi|294456611|gb|EFG24974.1| arginine--tRNA ligase [Veillonella sp. 6_1_27] Length = 577 Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 203/580 (35%), Positives = 308/580 (53%), Gaps = 60/580 (10%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 IV+E P G STN AM +R +P IAE +++ + D ++ +AG GFIN Sbjct: 32 IVLEVPPQKEFGDFSTNIAMQSARVARQNPRAIAEALISHMNFDW-LERAEVAGAGFINF 90 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +L + L +I+ +G EYG + + +E+VSANPTGP+HVGH R A G L Sbjct: 91 FLKSDMVYDTLKAILNAGTEYGVQPLRARDTIQVEYVSANPTGPLHVGHGRGAAYGSALV 150 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ---------ALYNNDS-----DLP 197 +L+ +GY V EYYINDAG QI+ +A+S+ +R+Q+ N D D+P Sbjct: 151 NLLRAAGYNVQSEYYINDAGNQIDNMAISIEYRFQELQGATLVFPPKRNEDGSMPEFDIP 210 Query: 198 EGY-------YPGVYLKHVGKELADKYSSELLN-FPEEKWLPIVKDYSVQAMMKIIRDDL 249 EG Y G + K +A++ + LN E + + K+ ++ + + + L Sbjct: 211 EGALVFPENGYRGPDIIETAKAIAEREGFDKLNAMNEADRVALFKEEGLKEKLARLEETL 270 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 + + D + SE H D I ++ L G VYE L Sbjct: 271 RNFRVTFDNWFSERTVHESDE--IHHSVEALKALGKVYE----------------KDGAL 312 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369 +ST GDD DR +++ +G TY AAD+AY + KY+RGF MI + G+DH GYV R++A Sbjct: 313 WLKSTDYGDDKDRVVIRDNGVPTYLAADIAYHRNKYDRGFKEMIDIWGADHHGYVCRVKA 372 Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429 AA ++ VLL ++V L+RDG +K+SKR+GD +TL +++EVG D+ R+ L R Sbjct: 373 AMAAFGYDPDKLTVLLLQMVALFRDGQLVKLSKRSGDSVTLDELIEEVGVDASRYFFLMR 432 Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489 LDFD K +S +NPV+Y+QYA+AR SI+ Q ++ + F + E+ Sbjct: 433 SLDSQLDFDINLAKSRSNDNPVYYIQYAHARIHSIYNQVRE--AGIAFGNY------SET 484 Query: 490 EFDT----SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 +F T EL+LI LAEYP + A + P+++A YLYDLAS+FH + GR Sbjct: 485 DFTTLTSEMELELIKKLAEYPEEVVQAAEHRAPHRIARYLYDLASMFHSFYRQGR----- 539 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + L RL L+ A+A ++ GL I+G+ +P +M Sbjct: 540 --IIGVDPALQQARLGLITAIALVLRQGLGILGISAPEKM 577 >gi|149377307|ref|ZP_01895053.1| arginyl-tRNA synthetase [Marinobacter algicola DG893] gi|149358404|gb|EDM46880.1| arginyl-tRNA synthetase [Marinobacter algicola DG893] Length = 561 Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 194/557 (34%), Positives = 308/557 (55%), Gaps = 40/557 (7%) Query: 38 RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 +D +HG + N A++ S+ G P +AE +V R+ V+ V IAG GFIN ++S + Sbjct: 36 KDKSHGDYACNIALVASKAAGCPPRKLAEALVERLPDSSAVEKVEIAGPGFINFFMSTAS 95 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 +++++I+ + +YGRN GKG KV +EFVSANPTGP+HVGH R A +GD L+ L+ + Sbjct: 96 AFEVVNTILDNAGQYGRNNNGKGEKVQVEFVSANPTGPLHVGHGRGAAIGDCLSRLLEAN 155 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK-----E 212 GY+VTRE+Y NDAGAQIN LALSV R + L +D + P Y G Y+ V E Sbjct: 156 GYDVTREFYYNDAGAQINNLALSVQSRV-KGLTPDDENWPADGYRGDYITDVANAYLAGE 214 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 E+ + + +++++V + + DLKA ++ D++ E + + Sbjct: 215 TVTADDREVTGKADPEDQQAIQEFAVAYLRREQDLDLKAFGVEFDVYFLESSLY--EDGK 272 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + + ++ L GY YE + ++T GDD DR + K DG YT Sbjct: 273 VEETVERLQENGYTYE----------------HDGAMWLKTTEFGDDKDRVMRKKDGGYT 316 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--KAQINVLLCELVR 390 YF D+AY K++RGF +I G+DH V R+ A A+S K + +L ++V Sbjct: 317 YFLPDVAYHLDKWQRGFTTVINEQGADHHSTVTRVRAGLQALSASIPKGWPDYVLHQMVM 376 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 + R G +K+SKRAG ++T+R ++DEVG D+ RF + R+ L FD + Q+ ENP Sbjct: 377 VTRSGQEVKISKRAGSYVTVRDLIDEVGRDATRFFLAARRVDSQLTFDIDLARSQTNENP 436 Query: 451 VFYVQYAYARCRSIFRQAKD--IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 V+Y+QYA+AR S+ R+ K+ + L+ + +++ + E D L LA+YP + Sbjct: 437 VYYIQYAHARICSVLRKLKEEGVERGLNECVGDLSLLTLDEEKD-----LANQLAKYPEL 491 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 IE++ +EP+ L YL DLA FH +++ + V + + R+ L AV Sbjct: 492 IESSAKLREPHHLTHYLRDLAGQFHTYYNAHK-------VLIEDTAIRDARVSLYLAVRQ 544 Query: 569 IINSGLNIIGVESPNEM 585 +I +GL+++GV +P+EM Sbjct: 545 VIANGLDLLGVSAPDEM 561 >gi|329901351|ref|ZP_08272796.1| Arginyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] gi|327549132|gb|EGF33727.1| Arginyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] Length = 553 Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 215/587 (36%), Positives = 318/587 (54%), Gaps = 67/587 (11%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87 +V+ERPRD AHG +S N AM L++PL +P +A+ +VA + DP VD+V IAG G Sbjct: 1 MVLERPRDPAHGDVSCNIAMQLAKPLKKNPRELAQQLVAALLADPARAGLVDAVEIAGPG 60 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FINL L+ + ++++ +++ +YGR +G G KV +EFVSANPTGP+HVGH R A +G Sbjct: 61 FINLRLALAARQEVVHTVLQEAADYGRGTLGTGRKVLLEFVSANPTGPLHVGHGRQAALG 120 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D L++L A GY+V RE+Y NDAG QI TLA SV R + D+D PE Y G Y+ Sbjct: 121 DALSALFAVQGYDVMREFYYNDAGVQIATLAASVQAR-ARGFKPGDADWPEPAYNGDYIG 179 Query: 208 HV------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 + GK ++ + ++ + L ++ + V + + DL+A ++ D + Sbjct: 180 DIALDFLAGKTVSAADCAPVIASGDVDDLDSIRQFGVAYLRREQDLDLQAFGVKFDNYYL 239 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E + GD + +D L + G YE +D L R+T GDD D Sbjct: 240 ESSLY-GD-GKVHAAVDALIKAGKTYE---------------LD-GALWLRTTDYGDDKD 281 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV--SEKKA 379 R + KSDG+YTYF D+AY K++RGF N I + GSDH G + R+ A AV K Sbjct: 282 RVMKKSDGTYTYFVPDVAYHIVKWQRGFGNAINIQGSDHHGTIARVRAGLQAVDLGIPKG 341 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD----EV----------------GS 419 + +L ++V + +DG +K+SKRAG ++TLR +++ EV G Sbjct: 342 YPDYVLHKMVTVMKDGEEVKISKRAGSYVTLRDLIEWSSGEVEVVTDAANDAPRDLTRGR 401 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-FD 478 D+VRF ++ RK FD + QS ENPV+YVQYA+AR S+ Q LD D Sbjct: 402 DAVRFFLISRKADTEFIFDVDLARAQSDENPVYYVQYAHARICSVLAQWGGDESVLDGVD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L P P+E+ L+ LA+YP +E+A P+++AFYL DLA H +++ Sbjct: 462 LSPLTA-PREA-------SLLARLADYPEALEHALEELGPHQVAFYLRDLAGELHSYYNA 513 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R V ++ M RL L+ A ++ +GL++IGV +P M Sbjct: 514 ER-------VLVDDMPTRMARLALMLATRQVLRNGLSLIGVSAPLRM 553 >gi|227495013|ref|ZP_03925329.1| arginine--tRNA ligase [Actinomyces coleocanis DSM 15436] gi|226831465|gb|EEH63848.1| arginine--tRNA ligase [Actinomyces coleocanis DSM 15436] Length = 559 Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 192/560 (34%), Positives = 302/560 (53%), Gaps = 40/560 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 IV+ERPR+ HG +TN AM L++ G++P +A I R+ ++ V +AG GFIN+ Sbjct: 34 IVVERPRNREHGDWATNIAMRLAKAAGMNPRELAVNIAFRLAEKEGIEKVDVAGPGFINI 93 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + ++ +I+ + YG N G VN+EFVSANPTGP+H+G R A VGDTLA Sbjct: 94 TLDAATAGELARTILTAKESYGTNQSQTGKHVNLEFVSANPTGPIHLGGARWAAVGDTLA 153 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 L+ SG +VTREYY ND GAQI+ A S+ R + + PE Y G Y++ + Sbjct: 154 RLLEASGAKVTREYYFNDHGAQIDRFARSLVARAK------GEEAPEDGYGGQYIEDIAN 207 Query: 212 E-LADKYSSELLN---FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 + +AD + N PE + + V+ M I+ L +++ D++ ED H Sbjct: 208 QVMADAQEAGEPNPVTLPEAEATEAFRARGVELMFAEIKKKLAEFHVEFDVYFHEDHLHT 267 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 + + I+ L +G +YE RST GDD DR ++KS Sbjct: 268 --TGAVAEAIEKLRDRGVIYEA----------------EGATWLRSTDFGDDKDRVIIKS 309 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLC 386 DG YFA D+AY+ K ERG D ++ ++G+DH GY+ R+ A+ AA +K + +L+ Sbjct: 310 DGDAAYFAGDIAYYLNKRERGADQVVIMLGADHHGYIGRMYAMCAAFGDKPGDNLELLIG 369 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446 +LV L +G P++MSKRAG +TL +V+ VG D+ R+ ++ + +D D + S Sbjct: 370 QLVNLLSNGEPLRMSKRAGTIVTLDDLVEAVGVDAARYALVRSSIDQAIDIDLDLLASHS 429 Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 +NPV+YVQYA+AR ++ R A + +D P E+ ++ QL+ LA++P Sbjct: 430 NDNPVYYVQYAHARTCNVSRNAAEHGVSMDAGFAP------EALDHAADAQLLGALAQFP 483 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL-RFVQANNRKLTMMRLQLVHA 565 ++ A +EP+++A YL LA+ +H + R PR V+ + + RL L A Sbjct: 484 AMVAQAAELREPHRVARYLESLAASYHTWYGQCRVTPRADELVETGH----VARLWLNEA 539 Query: 566 VASIINSGLNIIGVESPNEM 585 V ++ +GL ++GV +P + Sbjct: 540 VKQVLANGLALLGVSAPERL 559 >gi|313899150|ref|ZP_07832673.1| arginine--tRNA ligase [Clostridium sp. HGF2] gi|312956043|gb|EFR37688.1| arginine--tRNA ligase [Clostridium sp. HGF2] Length = 509 Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 188/507 (37%), Positives = 283/507 (55%), Gaps = 31/507 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFIN 90 IVIE P+D +HG STN AM L+R L +P IAE +V + K D++S IAG GFIN Sbjct: 29 IVIEIPKDKSHGDYSTNVAMQLTRVLKNNPRKIAEAVVEALDKAAADIESCEIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + + L +I++ ++ YG + G+G KVN+E+VSANPTG +H+GH R A GD++ Sbjct: 89 FTIKNTSLAQIITRVLQEQDNYGNSNDGQGLKVNVEYVSANPTGDLHLGHARGAAWGDSI 148 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 LM SGY+V REYY+NDAG QI L S+ RY++ L D DLPE Y G +K++ Sbjct: 149 TRLMKASGYDVCREYYVNDAGNQIVNLGKSLQARYREHL-GLDFDLPEDGYHGEDVKNIA 207 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 +A++Y + + + L K+ + + IR DL + D++ SE D Sbjct: 208 IAIAEEYKDAYVEYSDAN-LKFFKEKGIAFELDKIRRDLDNFRVHFDVWSSEQSIR--DE 264 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + ++ L +G YE L F +T GDD DR L K DGS Sbjct: 265 GKVEKALEVLHEKGLTYE----------------KDGALWFATTRFGDDKDRVLRKKDGS 308 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTY D+AY K K +RG+D ++ ++G+DH GY+ RL+A A+ ++ V + ++VR Sbjct: 309 YTYLVPDIAYHKDKLDRGYDLLVDLLGADHHGYIPRLKASIEALGNNPDKLQVDIIQMVR 368 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L +G +KMSKR G+ +T+R + +EVG D+VR+ + R LDFD ++QS +NP Sbjct: 369 LVENGEEVKMSKRLGNAVTIRELCEEVGVDAVRYFFVQRAVDTHLDFDLGLARKQSNDNP 428 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+Y QYA+AR SI RQA +I F+L E+ L+ ++ E+ V+ Sbjct: 429 VYYAQYAHARICSILRQASEIAEAKSFELLTH----------EKEIALMKYINEFTNVVS 478 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWS 537 +A ++ P+K+ Y+ LA FH ++ Sbjct: 479 DAARSRAPHKVCNYIQKLAQHFHSFYN 505 >gi|215410929|ref|ZP_03419737.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A] gi|298524796|ref|ZP_07012205.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A] gi|298494590|gb|EFI29884.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A] Length = 550 Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 206/592 (34%), Positives = 310/592 (52%), Gaps = 56/592 (9%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LK + + ++ L ++V +ERPR HG ++N AM L++ +G +P Sbjct: 4 ADLAELLKATAAAVLAERGLDASALPQMVTVERPRIPEHGDYASNLAMQLAKKVGTNPRE 63 Query: 64 IAE-LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +A L A K+D + S +AG GFIN+ L + K+++S++ +G YG +L+ G K Sbjct: 64 LAGWLAEALTKVD-GIASAEVAGPGFINMRLETAAQAKVVTSVIDAGHSYGHSLLLAGRK 122 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VN+EFVSANPTGP+H+G R A VGD L L+ G +V REYY ND GAQI+ A S+ Sbjct: 123 VNLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGADVVREYYFNDHGAQIDRFANSLI 182 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 + P+ Y G Y+ ++ +++ K + + L+ P+ + + V M Sbjct: 183 AAAK------GEPTPQDGYAGSYITNIAEQVLQK-APDALSLPDAELRETFRAIGVDLMF 235 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 I+ L D++ ED H G + + I L G +YE K T Sbjct: 236 DHIKQSLHEFGTDFDVYTHEDSMHTG--GRVENAIARLRETGNIYE------KDGAT--- 284 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 R++ GDD DR ++KSDG Y A DLAY+ K +RGFD IY++G+DH G Sbjct: 285 -------WLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHG 337 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 Y+ RL+A AAA + A + VL+ ++V L RDG P++MSKRAG +TL +V+ +G D+ Sbjct: 338 YIARLKAAAAAFGDDSATVEVLIGQMVNLVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAA 397 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 R+ ++ +D D S ENPV+YVQYA+AR ++ R A ++ Sbjct: 398 RYSLIRSSVDTAIDIDLALWSSASNENPVYYVQYAHARLSALARNAAEL----------- 446 Query: 483 NVIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 +IP DT+ L+L+ H L E+PRV+E A +EP+++ YL DLA +H Sbjct: 447 ALIP-----DTNHLELLNHDKEGTLLRTLGEFPRVLETAASLREPHRVCRYLEDLAGDYH 501 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R P+ L RL L A +I +GL IIGV +P M Sbjct: 502 RFYDSCRVLPQ---GDEQPTDLHTARLALCQATRQVIANGLAIIGVTAPERM 550 >gi|325917527|ref|ZP_08179730.1| arginyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937] gi|325536243|gb|EGD08036.1| arginyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937] Length = 555 Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 199/562 (35%), Positives = 305/562 (54%), Gaps = 38/562 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 V+ERP+ HG +TNAAM+L++ +P +A+ +VA + DV V IAG GFIN Sbjct: 24 FVVERPKTREHGDFATNAAMLLAKAARSNPRALAQALVAALPASDDVAKVEIAGPGFINF 83 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +L+P+ ++ ++ ++ G +YGR L G G V +E+VSANPTGP+HVGH R A +GD+LA Sbjct: 84 HLAPTAYQREVAHVIKQGNDYGRGLAGNGRSVGVEYVSANPTGPLHVGHGRAAAIGDSLA 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ +G+ V RE+Y NDAG QI LALSV R Q L + + PE Y G Y+ V Sbjct: 144 RVLEANGWNVKREFYYNDAGVQIENLALSVQAR-AQGLTPDSAGWPENGYRGDYIADVAN 202 Query: 212 -----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 + D + + L ++ ++V + DL A + DI+ E + Sbjct: 203 AYLAGDTVDLEGHLVSGSKDPADLESIRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLY 262 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 + + + + L G+ YE + L +ST GDD DR + K Sbjct: 263 K--DGKVEEAVQKLIASGHTYE----------------EGGALWLKSTDFGDDKDRVMRK 304 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVL 384 SDG+YTYF D+AY K++RG++ I +G+DH G + R+ A A + + + Sbjct: 305 SDGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLTRVRAGLQAMELGIPQGWPEYV 364 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L ++V + RDG +K+ KRAG +ITLR +++E +D+VR+ ++ RK L FD + Sbjct: 365 LHQMVTVMRDGEEVKLGKRAGGYITLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARA 424 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE-LQLIVHLA 503 QS +NPVFYVQYA+AR S+ RQA+ + F N + Q + D L +++ L+ Sbjct: 425 QSNDNPVFYVQYAHARVCSVLRQAQ----EKGFKYEQANGLAQLARLDDEHSLNVMLELS 480 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 YP V++ A A EPY++A YL +LA FH W H N +L A R +L L Sbjct: 481 RYPEVVDIAGQALEPYQIAQYLRELAHAFH-TWYH---NTKLLVDDAAERD---AKLTLA 533 Query: 564 HAVASIINSGLNIIGVESPNEM 585 A ++ +GL ++GV +P +M Sbjct: 534 VATQQVLANGLELLGVSAPEKM 555 >gi|84494550|ref|ZP_00993669.1| arginyl-tRNA synthetase [Janibacter sp. HTCC2649] gi|84384043|gb|EAP99923.1| arginyl-tRNA synthetase [Janibacter sp. HTCC2649] Length = 548 Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 195/583 (33%), Positives = 315/583 (54%), Gaps = 42/583 (7%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 + SS ++ L E + + +ERP++ HG STN A+ L++ G+ P +A Sbjct: 5 ELSSAIRAALLEATAAGDFTVDVPGEVRVERPKNRGHGDWSTNIALQLAKTAGMPPRDLA 64 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 + R++ + V +AG GF+N+ L + ++ +IV SG YG+N G +N+ Sbjct: 65 TRLAERLRAMDGIAQVDVAGPGFLNIGLDAASAGELARNIVESGTAYGKNDSEAGHTINL 124 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EF+SANPTGP+H+GH R A +GD++ L+ SG +VT EYYINDAGAQ++ ALSV Sbjct: 125 EFISANPTGPLHIGHTRWAALGDSMRRLLTASGADVTAEYYINDAGAQMDKFALSVLAGA 184 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245 + PEG YPG Y+ + K + ++ ++L+ PE++ + + + + A + I Sbjct: 185 KG------QPTPEGGYPGAYIGDLAKAVVEQ-RPDVLDLPEDEAIAVARPLAYTAQLAEI 237 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 + L+ + D++ SE + H G + ++ L QG+V D Sbjct: 238 QQTLERFGVFFDVWFSEQELHDG--GAVEKAVERLREQGHV----------------DDK 279 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365 + R+T DD DR L+++DG TYFAAD AY+ K +RGF IY++G+DH GY+ Sbjct: 280 DGAVWLRTTDFTDDKDRVLIRADGVPTYFAADAAYYLSKKDRGFTEKIYLLGADHHGYIG 339 Query: 366 RLEAVAA-AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 RL+A+AA A + + I+V + +LV L K+SKRAG+ I L ++D +G D+VR+ Sbjct: 340 RLKAIAACAGDDPEVNIDVRIGQLVNLN----GAKLSKRAGNIIELNDLLDWIGKDAVRY 395 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 + L D ++++Q+ +NPVFYVQYA+AR ++ R A + D P + Sbjct: 396 NLARYPADSPLSLDGEELRKQTNDNPVFYVQYAHARTANVSRLAGEDGVRRDDGFDPALL 455 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 D +E L+ L ++PRV+ A +EP+++A YL DLA +H W + R Sbjct: 456 T------DATEATLLAILGDFPRVVAQAAQLREPHRVARYLEDLAGRYH-KWY---DTCR 505 Query: 545 LRFVQANNR--KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +R + A L RL L A ++ +GL+++GV +P M Sbjct: 506 VRPMNAEEEVTDLHRTRLWLNDATRQVLANGLDLLGVSAPERM 548 >gi|319785770|ref|YP_004145245.1| arginyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1] gi|317464282|gb|ADV26014.1| arginyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1] Length = 562 Score = 327 bits (839), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 196/567 (34%), Positives = 301/567 (53%), Gaps = 50/567 (8%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 VIERP+ HG +TNAAM+L++ +P +A+ +V + DV IAG GFIN + Sbjct: 32 VIERPKTREHGDFATNAAMLLAKAARTNPRAVAQALVEAMPASDDVARAEIAGPGFINFH 91 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L+ ++ ++ ++ G EYGRN G+G +E+VSANPTGP+HVGH R A +GD +A Sbjct: 92 LAAGAWQREVAGVLRHGGEYGRNTTGQGRTAGVEYVSANPTGPLHVGHGRAAAIGDCIAR 151 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 ++ +G++V RE+Y NDAG QI LA S R + L D++ P Y G Y++ V Sbjct: 152 VLDANGWKVKREFYYNDAGVQIENLARSTQARL-RGLKPGDAEWPAEAYNGDYIQDV--- 207 Query: 213 LADKY---------SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 AD Y + + + + ++ ++V + DL A ++ DI+ E Sbjct: 208 -ADAYLRGDTVEIEGHAVTASGDVEDIDSIRRFAVAYLRNEQNQDLAAFGVEFDIYFLES 266 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323 +R + + + L +G+ YE + L RST GDD DR Sbjct: 267 SLYR--DGKVEETVRELGAKGHTYE----------------EGGALWLRSTDFGDDKDRV 308 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQI 381 + KSDG+YTYF D+AY K++RG++ I +G+DH G + R+ A A V K Sbjct: 309 MRKSDGTYTYFVPDVAYHLSKWQRGYERAITELGADHHGSLARVRAGLQALDVGIPKGWP 368 Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441 +L ++V + R G +K+SKRAG ++TLR +++E G D+ R+ ++ RK L FD Sbjct: 369 EYVLHQMVTVMRGGEEVKLSKRAGSYLTLRDLIEEAGRDATRWFLIARKPDSQLVFDIDL 428 Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501 ++QS +NPVFYVQYA+AR ++FRQ + D N+ + D L L+V Sbjct: 429 ARQQSNDNPVFYVQYAHARVAALFRQGAEKGYAFDQANGLANLARLD---DDGSLTLVVE 485 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMM 558 L+ YP V+E A + EP+ +A YL +LA FH +++ E P LR Sbjct: 486 LSRYPEVVEAAGQSLEPHLVAQYLRELAYAFHTWYANTPVLVEEPALRDA---------- 535 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 RL L AV ++ +GL ++GV +P M Sbjct: 536 RLALAQAVQQVLANGLGLLGVSAPERM 562 >gi|269216290|ref|ZP_06160144.1| arginine--tRNA ligase [Slackia exigua ATCC 700122] gi|269130549|gb|EEZ61627.1| arginine--tRNA ligase [Slackia exigua ATCC 700122] Length = 601 Score = 327 bits (839), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 194/566 (34%), Positives = 304/566 (53%), Gaps = 36/566 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I++ERPRD HG ST A+ ++ +P IA+ IV + V+ V IAG GFIN Sbjct: 60 ILLERPRDVGHGDWSTPVALRCAKAAHKNPREIAQTIVDALPEADFVEQVEIAGPGFINF 119 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGT-KVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL L+ +++ + G +YG+ I +G KV IE++S+NPTGPMHVGH R A +G + Sbjct: 120 YLKDGALQNVIADVRAQGADYGKGEIPEGMRKVLIEYISSNPTGPMHVGHGRWAALGSAM 179 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A LM +GYEV E+YIND G Q++ S+ RY L +++++PEG Y G Y+ + Sbjct: 180 AKLMQHAGYEVDEEFYINDHGVQMDKFGQSIVARYLTQL-GHETEVPEGGYNGGYVNDIA 238 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 + L ++ +N E + + +++ A+++ IR + SE + + + Sbjct: 239 RALIERDGDRWVNADEHERMVEFREFGYAALLENIRKVCDEFGTVFQYWQSERELYVPNE 298 Query: 271 -----SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 SP+ + L G VY D D + FRS+ GD+ DR ++ Sbjct: 299 KWDGMSPVDYCLSKLRENGDVY---------------DKD-GAVWFRSSKYGDEKDRVVI 342 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 KSDG YTYFA+D+ Y K RG+D +I + G+DH GY+ R+ AV AA+ A + V L Sbjct: 343 KSDGEYTYFASDVGYHYIKKLRGYDKLIDIWGADHHGYIPRVAAVLAAMGYPGA-LEVPL 401 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 +LV L+R G P++MSKR G+ IT +++EVG D+ R+ ML R + +DFD + K+Q Sbjct: 402 GQLVNLFRGGKPVRMSKRTGEMITFEELIEEVGVDATRWKMLERSTDQPIDFDIEEAKKQ 461 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPD--LDFDLFPRNVIPQESEF----DTSELQLI 499 NPV+YVQYA+AR S+ R A + LD IP + + + SEL L+ Sbjct: 462 DASNPVYYVQYAHARICSLLRNAAGHSGEDNLDMSAVASECIPADVDLSLLTEESELALM 521 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 ++E+ ++ A + P++L Y +LA +FH +++ ++A + L R Sbjct: 522 RKMSEFGDLVALAARDRAPFRLTHYAQELAGMFHQFYTN------CPVLKAEDESLKQAR 575 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L A ++ L I+G+ +P M Sbjct: 576 LALADATRIVLEIALGIMGISAPQRM 601 >gi|148822510|ref|YP_001287264.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis F11] gi|253799662|ref|YP_003032663.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis KZN 1435] gi|254550299|ref|ZP_05140746.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289554918|ref|ZP_06444128.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis KZN 605] gi|297633842|ref|ZP_06951622.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207] gi|297730829|ref|ZP_06959947.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506] gi|313658161|ref|ZP_07815041.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475] gi|148721037|gb|ABR05662.1| arginyl-tRNA synthetase argS (arginine-tRNA ligase) [Mycobacterium tuberculosis F11] gi|253321165|gb|ACT25768.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis KZN 1435] gi|289439550|gb|EFD22043.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis KZN 605] gi|328459408|gb|AEB04831.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis KZN 4207] Length = 550 Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 206/592 (34%), Positives = 310/592 (52%), Gaps = 56/592 (9%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LK + + ++ L ++V +ERPR HG ++N AM L++ +G +P Sbjct: 4 ADLAELLKATAAAVLAERGLDASALPQMVTVERPRIPEHGDYASNLAMQLAKKVGTNPRE 63 Query: 64 IAE-LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +A L A K+D + S +AG GFIN+ L + K+++S++ +G YG +L+ G K Sbjct: 64 LAGWLAEALTKVD-GIASAEVAGPGFINMRLETAAQAKVVTSVIDAGHSYGHSLLLAGRK 122 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VN+EFVSANPTGP+H+G R A VGD L L+ G +V REYY ND GAQI+ A S+ Sbjct: 123 VNLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGADVVREYYFNDHGAQIDRFANSL- 181 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 + P+ Y G Y+ ++ +++ K + + L+ P+ + + V M Sbjct: 182 -----SAAAKGEPTPQDGYAGSYITNIAEQVLQK-APDALSLPDAELRETFRAIGVDLMF 235 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 I+ L D++ ED H G + + I L G +YE K T Sbjct: 236 DHIKQSLHEFGTDFDVYTHEDSMHTG--GRVENAIARLRETGNIYE------KDGAT--- 284 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 R++ GDD DR ++KSDG Y A DLAY+ K +RGFD IY++G+DH G Sbjct: 285 -------WLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHG 337 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 Y+ RL+A AAA + A + VL+ ++V L RDG P++MSKRAG +TL +V+ +G D+ Sbjct: 338 YIARLKAAAAAFGDDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAA 397 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 R+ ++ +D D S ENPV+YVQYA+AR ++ R A ++ Sbjct: 398 RYSLIRSSVDTAIDIDLALWSSASNENPVYYVQYAHARLSALARNAAEL----------- 446 Query: 483 NVIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 +IP DT+ L+L+ H L E+PRV+E A +EP+++ YL DLA +H Sbjct: 447 ALIP-----DTNHLELLNHDKEGTLLRTLGEFPRVLETAASLREPHRVCRYLEDLAGDYH 501 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R P+ L RL L A +I +GL IIGV +P M Sbjct: 502 RFYDSCRVLPQ---GDEQPTDLHTARLALCQATRQVIANGLAIIGVTAPERM 550 >gi|326902914|gb|EGE49847.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis W-148] Length = 550 Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 206/592 (34%), Positives = 310/592 (52%), Gaps = 56/592 (9%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LK + + ++ L ++V +ERPR HG ++N AM L++ +G +P Sbjct: 4 ADLAELLKATAAAVLAERGLDASALPQMVTVERPRIPEHGDYASNLAMQLAKKVGTNPRE 63 Query: 64 IAE-LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +A L A K+D + S +AG GFIN+ L + K+++S++ +G YG +L+ G K Sbjct: 64 LAGWLAEALTKVD-GIASAEVAGPGFINMRLETAAQAKVVTSVIDAGHSYGHSLLLTGRK 122 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VN+EFVSANPTGP+H+G R A VGD L L+ G +V REYY ND GAQI+ A S+ Sbjct: 123 VNLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGADVVREYYFNDHGAQIDRFANSLI 182 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 + P+ Y G Y+ ++ +++ K + + L+ P+ + + V M Sbjct: 183 AAAK------GEPTPQDGYAGSYITNIAEQVLQK-APDALSLPDAELRETFRAIGVDLMF 235 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 I+ L D++ ED H G + + I L G +YE K T Sbjct: 236 DHIKQSLHEFGTDFDVYTHEDSMHTG--GRVENAIARLRETGNIYE------KDGAT--- 284 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 R++ GDD DR ++KSDG Y A DLAY+ K +RGFD IY++G+DH G Sbjct: 285 -------WLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHG 337 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 Y+ RL+A AAA + A + VL+ ++V L RDG P++MSKRAG +TL +V+ +G D+ Sbjct: 338 YIARLKAAAAAFGDDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAA 397 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 R+ ++ +D D S ENPV+YVQYA+AR ++ R A ++ Sbjct: 398 RYSLIRSSVDTAIDIDLALWSSASNENPVYYVQYAHARLSALARNAAEL----------- 446 Query: 483 NVIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 +IP DT+ L+L+ H L E+PRV+E A +EP+++ YL DLA +H Sbjct: 447 ALIP-----DTNHLELLNHDKEGTLLRTLGEFPRVLETAASLREPHRVCRYLEDLAGDYH 501 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R P+ L RL L A +I +GL IIGV +P M Sbjct: 502 RFYDSCRVLPQ---GDEQPTDLHTARLALCQATRQVIANGLAIIGVTAPERM 550 >gi|15608432|ref|NP_215808.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv] gi|15840742|ref|NP_335779.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551] gi|31792485|ref|NP_854978.1| arginyl-tRNA synthetase [Mycobacterium bovis AF2122/97] gi|121637221|ref|YP_977444.1| arginyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148661080|ref|YP_001282603.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra] gi|167969617|ref|ZP_02551894.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra] gi|215403132|ref|ZP_03415313.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987] gi|215430177|ref|ZP_03428096.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis EAS054] gi|215445469|ref|ZP_03432221.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis T85] gi|219557191|ref|ZP_03536267.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis T17] gi|224989696|ref|YP_002644383.1| arginyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172] gi|254364189|ref|ZP_04980235.1| arginyl-tRNA synthetase argS (arginine-tRNA ligase) [Mycobacterium tuberculosis str. Haarlem] gi|260186229|ref|ZP_05763703.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A] gi|260200343|ref|ZP_05767834.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis T46] gi|260204548|ref|ZP_05772039.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis K85] gi|289442731|ref|ZP_06432475.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis T46] gi|289446887|ref|ZP_06436631.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis CPHL_A] gi|289569302|ref|ZP_06449529.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis T17] gi|289573955|ref|ZP_06454182.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis K85] gi|289745038|ref|ZP_06504416.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987] gi|289753369|ref|ZP_06512747.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis EAS054] gi|289757392|ref|ZP_06516770.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis T85] gi|294994847|ref|ZP_06800538.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis 210] gi|306775461|ref|ZP_07413798.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu001] gi|306971571|ref|ZP_07484232.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu010] gi|307079285|ref|ZP_07488455.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu011] gi|307083854|ref|ZP_07492967.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu012] gi|54039682|sp|P67570|SYR_MYCBO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|54042043|sp|P67569|SYR_MYCTU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|166232808|sp|A1KI80|SYR_MYCBP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|166232811|sp|A5U1Z1|SYR_MYCTA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|254782976|sp|C1AMT6|SYR_MYCBT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|1322416|emb|CAA97757.1| PROBABLE ARGINYL-TRNA SYNTHETASE ARGS (ARGRS) (Arginine--tRNA ligase) [Mycobacterium tuberculosis H37Rv] gi|13880933|gb|AAK45593.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551] gi|31618074|emb|CAD94185.1| PROBABLE ARGINYL-TRNA SYNTHETASE ARGS (ARGRS) (Arginine--tRNA ligase) [Mycobacterium bovis AF2122/97] gi|121492868|emb|CAL71339.1| Probable arginyl-tRNA synthetase argS [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|134149703|gb|EBA41748.1| arginyl-tRNA synthetase argS (arginine-tRNA ligase) [Mycobacterium tuberculosis str. Haarlem] gi|148505232|gb|ABQ73041.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra] gi|224772809|dbj|BAH25615.1| arginyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172] gi|289415650|gb|EFD12890.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis T46] gi|289419845|gb|EFD17046.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis CPHL_A] gi|289538386|gb|EFD42964.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis K85] gi|289543056|gb|EFD46704.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis T17] gi|289685566|gb|EFD53054.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987] gi|289693956|gb|EFD61385.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis EAS054] gi|289712956|gb|EFD76968.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis T85] gi|308216081|gb|EFO75480.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu001] gi|308358941|gb|EFP47792.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu010] gi|308362849|gb|EFP51700.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu011] gi|308366489|gb|EFP55340.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu012] gi|323720249|gb|EGB29348.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis CDC1551A] Length = 550 Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 206/592 (34%), Positives = 310/592 (52%), Gaps = 56/592 (9%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LK + + ++ L ++V +ERPR HG ++N AM L++ +G +P Sbjct: 4 ADLAELLKATAAAVLAERGLDASALPQMVTVERPRIPEHGDYASNLAMQLAKKVGTNPRE 63 Query: 64 IAE-LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +A L A K+D + S +AG GFIN+ L + K+++S++ +G YG +L+ G K Sbjct: 64 LAGWLAEALTKVD-GIASAEVAGPGFINMRLETAAQAKVVTSVIDAGHSYGHSLLLAGRK 122 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VN+EFVSANPTGP+H+G R A VGD L L+ G +V REYY ND GAQI+ A S+ Sbjct: 123 VNLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGADVVREYYFNDHGAQIDRFANSLI 182 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 + P+ Y G Y+ ++ +++ K + + L+ P+ + + V M Sbjct: 183 AAAK------GEPTPQDGYAGSYITNIAEQVLQK-APDALSLPDAELRETFRAIGVDLMF 235 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 I+ L D++ ED H G + + I L G +YE K T Sbjct: 236 DHIKQSLHEFGTDFDVYTHEDSMHTG--GRVENAIARLRETGNIYE------KDGAT--- 284 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 R++ GDD DR ++KSDG Y A DLAY+ K +RGFD IY++G+DH G Sbjct: 285 -------WLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHG 337 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 Y+ RL+A AAA + A + VL+ ++V L RDG P++MSKRAG +TL +V+ +G D+ Sbjct: 338 YIARLKAAAAAFGDDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAA 397 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 R+ ++ +D D S ENPV+YVQYA+AR ++ R A ++ Sbjct: 398 RYSLIRSSVDTAIDIDLALWSSASNENPVYYVQYAHARLSALARNAAEL----------- 446 Query: 483 NVIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 +IP DT+ L+L+ H L E+PRV+E A +EP+++ YL DLA +H Sbjct: 447 ALIP-----DTNHLELLNHDKEGTLLRTLGEFPRVLETAASLREPHRVCRYLEDLAGDYH 501 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R P+ L RL L A +I +GL IIGV +P M Sbjct: 502 RFYDSCRVLPQ---GDEQPTDLHTARLALCQATRQVIANGLAIIGVTAPERM 550 >gi|307265113|ref|ZP_07546673.1| arginyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919911|gb|EFN50125.1| arginyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1] Length = 562 Score = 327 bits (838), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 198/550 (36%), Positives = 308/550 (56%), Gaps = 40/550 (7%) Query: 42 HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD---VDSVFIAGKGFINLYLSPSYL 98 HG L+ N AM++++ + P IAE+IV+ K+DP ++ + IAG GFIN +L +L Sbjct: 47 HGDLAINTAMVIAKQAKMPPKKIAEIIVS--KMDPSNTFIERIEIAGPGFINFFLKDKFL 104 Query: 99 RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158 + L + G +YGR IG G KV +EFVSANPTGPMH+G+ R +GD LAS++ ++G Sbjct: 105 EETLKLVYERGKDYGRVNIGNGKKVQVEFVSANPTGPMHMGNARGGALGDALASVLDYAG 164 Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218 Y+VTRE+YINDAG QI S+ RY Q L +++PEG Y G + +E + Y Sbjct: 165 YDVTREFYINDAGNQIEKFGYSLEARYLQ-LLGIPAEVPEGGYHGEDIIDRAREFLEIYG 223 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 + + P E+ + +Y ++ ++ I++DL I++D++ SE + D + +I+ Sbjct: 224 DKYKDAPSEERRRALIEYGLKENLEKIKEDLALYGIEYDVWFSEQSLY--DSGEVHKVIE 281 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 +L ++GY YE L F+ T+ G + D L++S+G TY A+D+ Sbjct: 282 DLKQKGYTYE----------------KDGALWFKMTLFGAEKDDVLVRSNGIPTYLASDI 325 Query: 339 AYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397 AY K K+ RGFD +I V G+DH G+V ++ A+ +++V+L +LV+L G Sbjct: 326 AYHKNKFITRGFDWVINVWGADHHGHVAPMKGAMQALGIDPDRLDVVLMQLVKLIEGGQV 385 Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457 ++MSKR G +TLR ++DEVG D+ RF R +DFD KEQS ENPVFYVQYA Sbjct: 386 VRMSKRTGRMVTLRDLIDEVGKDAARFFFNLRSADSPIDFDLDLAKEQSNENPVFYVQYA 445 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNV--IPQESEFDTSELQLIVHLAEYPRVIENATIA 515 +AR SI RQ ++ +D N+ + + E +LI LA +P I A Sbjct: 446 HARICSIIRQLEEEGVKID------NIDEVDLSLLKEEEEKELIKKLAYFPEEITIAAKT 499 Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575 P+++ Y+ D+AS+FH ++ R V+ L R L+ AV ++I + L+ Sbjct: 500 LAPHRITRYVLDVASLFHSFYNSHR-------VKGVEEDLMKARFVLILAVKTVIKNALD 552 Query: 576 IIGVESPNEM 585 I+ + +P M Sbjct: 553 ILKITAPERM 562 >gi|329945378|ref|ZP_08293141.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386] gi|328529000|gb|EGF55931.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386] Length = 570 Score = 327 bits (838), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 193/557 (34%), Positives = 300/557 (53%), Gaps = 35/557 (6%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +ERPR+ HG STN AM L++ G P +AEL+V R++ V SV +AG GF+N+ L Sbjct: 44 VERPRNRDHGDWSTNVAMQLAKKAGTRPRDLAELLVPRLEALDGVASVEVAGPGFLNIRL 103 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + ++ SIV +G YGRN G +N+E+VSANPTGP+H+G R A VGD+LA + Sbjct: 104 DAASAGELARSIVEAGEAYGRNDSLSGQHINLEYVSANPTGPVHLGGARWAAVGDSLARI 163 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 ++ G VTREYY ND G QI+ A S+ + ++PE Y G Y+ + +++ Sbjct: 164 LSACGARVTREYYFNDHGTQIDRFASSLLASARG------QEIPEDGYGGAYIGEIAQQV 217 Query: 214 -ADKYSS---ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 AD+ ++ + P+ + + + V M ++ +L A D+F ED H Sbjct: 218 TADELAAGRPDPATLPDAEAAEVFRARGVDLMFAAVKAELHAFRSDFDVFFHEDSLHT-- 275 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + I L +G + E + T R+T GDD DR L+KSDG Sbjct: 276 SGAVERAIARLRERGVIEE------RDGAT----------WLRTTDFGDDKDRVLIKSDG 319 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCEL 388 + YFAADLAY+ K ERG D +Y+ G+DH GY+ R+ A+ AA + + +L+ +L Sbjct: 320 NAAYFAADLAYYLDKRERGTDCALYLFGADHHGYIGRMMAMCAAFGDTPGTNMQILIGQL 379 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V L R+G+P++MSKRAG +TL +VD VG D+ R+ + ++D D + + + Sbjct: 380 VNLVRNGVPVRMSKRAGTVVTLEDLVDAVGVDAARYALARSSMDSMIDIDLDLLASSTSD 439 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 NPV+YVQYA+AR R++ R A + D + P + DT+ L + LA++P Sbjct: 440 NPVYYVQYAHARTRNVARNAAEHGVSRDPKVAPFEPAALDDPADTALLGV---LAQFPAT 496 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 + A +E +++A YL LA+ +H + R PR ++ + RL L AV Sbjct: 497 VAQAASLREQHRVARYLEQLAAAYHTWYGATRVTPRGDDAVSSGH---VARLWLNDAVGQ 553 Query: 569 IINSGLNIIGVESPNEM 585 ++ +GL ++GV +P M Sbjct: 554 VLANGLGLLGVTAPERM 570 >gi|254231550|ref|ZP_04924877.1| arginyl-tRNA synthetase argS (arginine-tRNA ligase) [Mycobacterium tuberculosis C] gi|124600609|gb|EAY59619.1| arginyl-tRNA synthetase argS (arginine-tRNA ligase) [Mycobacterium tuberculosis C] Length = 619 Score = 327 bits (838), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 206/592 (34%), Positives = 310/592 (52%), Gaps = 56/592 (9%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LK + + ++ L ++V +ERPR HG ++N AM L++ +G +P Sbjct: 73 ADLAELLKATAAAVLAERGLDASALPQMVTVERPRIPEHGDYASNLAMQLAKKVGTNPRE 132 Query: 64 IAE-LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +A L A K+D + S +AG GFIN+ L + K+++S++ +G YG +L+ G K Sbjct: 133 LAGWLAEALTKVD-GIASAEVAGPGFINMRLETAAQAKVVTSVIDAGHSYGHSLLLAGRK 191 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VN+EFVSANPTGP+H+G R A VGD L L+ G +V REYY ND GAQI+ A S+ Sbjct: 192 VNLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGADVVREYYFNDHGAQIDRFANSLI 251 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 + P+ Y G Y+ ++ +++ K + + L+ P+ + + V M Sbjct: 252 AAAK------GEPTPQDGYAGSYITNIAEQVLQK-APDALSLPDAELRETFRAIGVDLMF 304 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 I+ L D++ ED H G + + I L G +YE K T Sbjct: 305 DHIKQSLHEFGTDFDVYTHEDSMHTG--GRVENAIARLRETGNIYE------KDGAT--- 353 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 R++ GDD DR ++KSDG Y A DLAY+ K +RGFD IY++G+DH G Sbjct: 354 -------WLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHG 406 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 Y+ RL+A AAA + A + VL+ ++V L RDG P++MSKRAG +TL +V+ +G D+ Sbjct: 407 YIARLKAAAAAFGDDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAA 466 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 R+ ++ +D D S ENPV+YVQYA+AR ++ R A ++ Sbjct: 467 RYSLIRSSVDTAIDIDLALWSSASNENPVYYVQYAHARLSALARNAAEL----------- 515 Query: 483 NVIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 +IP DT+ L+L+ H L E+PRV+E A +EP+++ YL DLA +H Sbjct: 516 ALIP-----DTNHLELLNHDKEGTLLRTLGEFPRVLETAASLREPHRVCRYLEDLAGDYH 570 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R P+ L RL L A +I +GL IIGV +P M Sbjct: 571 RFYDSCRVLPQ---GDEQPTDLHTARLALCQATRQVIANGLAIIGVTAPERM 619 >gi|154509454|ref|ZP_02045096.1| hypothetical protein ACTODO_01985 [Actinomyces odontolyticus ATCC 17982] gi|293189483|ref|ZP_06608203.1| arginine--tRNA ligase [Actinomyces odontolyticus F0309] gi|153799088|gb|EDN81508.1| hypothetical protein ACTODO_01985 [Actinomyces odontolyticus ATCC 17982] gi|292821573|gb|EFF80512.1| arginine--tRNA ligase [Actinomyces odontolyticus F0309] Length = 559 Score = 327 bits (838), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 193/572 (33%), Positives = 310/572 (54%), Gaps = 41/572 (7%) Query: 21 KIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD 79 +I ++ ++ D + +ERPR HG +TN AM L + G+ P A+++ + +D Sbjct: 22 RISIDPSLVPDPVTVERPRVREHGDWATNVAMQLGKKAGMAPREFAQILADDLAAADGID 81 Query: 80 SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139 SV +AG GFIN+ L ++ +IV +G YGRN G +N+E+VSANPTGP+H+G Sbjct: 82 SVEVAGPGFINIRLGAGAAGELARTIVEAGAAYGRNETLSGRSINLEYVSANPTGPVHLG 141 Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199 R A VGD+LA LMA SG VTREYY ND G+QI+ + S++ R ++PE Sbjct: 142 GARWAAVGDSLARLMAASGAAVTREYYFNDHGSQIDRFSHSLYARAM------GREVPED 195 Query: 200 YYPGVYLKHVGKEL-ADKYSS---ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255 Y G Y+ + ++ AD ++ + + PEE+ + + + V+ M I++ L + Sbjct: 196 GYGGQYIADIADQVRADARAAGEPDPITLPEEEAIEVFRARGVELMFAEIKERLHSFRAD 255 Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315 D+F E+ H + I+ L +G +++ + + R+T Sbjct: 256 FDVFFHEESLHT--SGAVAAAIERLRERGEIFD----------------EDGAVWLRTTT 297 Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375 GDD DR L+KSDG YFA D+AY+ K ERG D IY++G+DH GY+ R+ A+ AA Sbjct: 298 YGDDKDRVLIKSDGQAAYFAGDVAYYLNKRERGADVAIYLLGADHHGYIARMMAMCAAFG 357 Query: 376 EKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434 +K + + +L+ +LV L +DG P++MSKRAG +TL +VD VG D+ R+ ++ Sbjct: 358 DKPGENLQILIGQLVNLVKDGEPVRMSKRAGTIVTLDDLVDAVGVDAARYALVRVSMDTQ 417 Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494 +D D + + S +NPV+YVQYA+ R ++ R A + D P + +SE D + Sbjct: 418 VDIDLDLLSQHSNDNPVYYVQYAHVRACNVARNAAEHGVTRDAGFDPAAL---DSEADEA 474 Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF-VQANNR 553 L + ++P + AT +EP+++ YL LA+ +H + R PR V+ + Sbjct: 475 LLAALA---QFPAQVAQATELREPHRITRYLESLAATYHAWYGQCRVTPRGDDPVEPGH- 530 Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL L AV ++ +GL ++GV +P M Sbjct: 531 ---IARLWLNDAVTQVLRTGLGLLGVSAPERM 559 >gi|317123140|ref|YP_004103143.1| arginyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885] gi|315593120|gb|ADU52416.1| arginyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885] Length = 566 Score = 327 bits (838), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 193/557 (34%), Positives = 297/557 (53%), Gaps = 37/557 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + +E PRD HG ++NAA++L+ G P +A + + + V +AG GF+N Sbjct: 44 VQVEVPRDPRHGDFASNAALVLAGRAGRPPREVAAVFQRHLPGGAWLRQVEVAGPGFLNF 103 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 YL+ ++ ++ + +I+ +G +G G G KV +EFVSANPTGP+ V + R A +GD LA Sbjct: 104 YLADAWWKEGVRAILQAGDAFGATDAGAGRKVQVEFVSANPTGPLGVVNARAAALGDALA 163 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ +GY V +E+Y+NDAG QI LA SV R +Q L ++++PEG YPG YL + + Sbjct: 164 RVLEAAGYRVEKEFYLNDAGNQIRKLAQSVEARMRQEL-GQEAEIPEGGYPGAYLIDIAR 222 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 +L LL+ PEE+ + ++V++++ +R L ++ D++ E R + Sbjct: 223 DLLAAEGPGLLDRPEEQRWERMARFAVESLVAQMRTQLARFGVEFDVWYPESRV-RAEGY 281 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 P R +++ L ++ VYE + RS+ VGDD DR L++ DG Y Sbjct: 282 PER-VLERLRQRDMVYE----------------HDGAVWLRSSAVGDDKDRVLVRRDGEY 324 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 TY D+AY K+ERGF I + G DH G+V +EA A+ VLL ++V L Sbjct: 325 TYTLVDIAYHLTKWERGFQQAIDIWGQDHHGHVVPMEAALRALGLPDGWFEVLLTQMVHL 384 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 R G ++MSKR G+ +T+ +DEV D+ R+ L R LDFD +S ENPV Sbjct: 385 VRGGQAVRMSKRRGELVTMAEFLDEVDVDAARYFFLMRSPDTHLDFDLDLANLRSNENPV 444 Query: 452 FYVQYAYARCRSIFRQAK---DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 +YVQYA+AR I RQA+ + PD DL P D +E L L + P Sbjct: 445 YYVQYAHARACGILRQAEAEAGLRPDPAADLSPLG--------DPAERDLARRLLDLPGE 496 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 + A A+EP++L +YL D+A++FH ++ R V + RL LV A Sbjct: 497 VAAAAAAREPHRLTYYLKDVATLFHQFYTRCR-------VLGEEEPVARARLALVDATRR 549 Query: 569 IINSGLNIIGVESPNEM 585 ++ L ++GV +P M Sbjct: 550 VLARTLGLLGVTAPERM 566 >gi|256751682|ref|ZP_05492557.1| arginyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1] gi|256749491|gb|EEU62520.1| arginyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1] Length = 562 Score = 327 bits (837), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 198/550 (36%), Positives = 307/550 (55%), Gaps = 40/550 (7%) Query: 42 HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD---VDSVFIAGKGFINLYLSPSYL 98 HG L+ N AM++++ + P IAE+IV+ K+DP ++ + IAG GFIN +L +L Sbjct: 47 HGDLAINTAMVIAKQAKMPPKKIAEIIVS--KMDPSNTFIERIEIAGPGFINFFLKDKFL 104 Query: 99 RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158 + L + G +YGR IG G KV +EFVSANPTGPMH+G+ R +GD LAS++ ++G Sbjct: 105 EETLKLVYERGKDYGRVNIGNGKKVQVEFVSANPTGPMHMGNARGGALGDALASVLDYAG 164 Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218 Y+VTRE+YINDAG QI S+ RY Q L +++PEG Y G + +E + Y Sbjct: 165 YDVTREFYINDAGNQIEKFGYSLEARYLQ-LLGIPAEVPEGGYHGEDIIDRAREFLEIYG 223 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 + + P E+ + +Y ++ ++ I++DL I++D++ SE + D + +I+ Sbjct: 224 DKYKDVPSEERRKALIEYGLKKNLEKIKEDLALYGIEYDVWFSEQSLY--DSGEVYKVIE 281 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 L ++GY YE L F+ T+ G + D L++S+G TY A+D+ Sbjct: 282 ELKQKGYTYE----------------KDGALWFKMTLFGAEKDDVLVRSNGFPTYLASDI 325 Query: 339 AYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397 AY K K+ RGFD +I V G+DH G+V ++ A+ +++V+L +LV+L G Sbjct: 326 AYHKNKFITRGFDWVINVWGADHHGHVAPMKGAMQALGIDPDRLDVVLMQLVKLIEGGQV 385 Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457 +KMSKR G +TLR ++DEVG D+ RF R +DFD KEQS ENPVFYVQYA Sbjct: 386 VKMSKRTGRMVTLRDLIDEVGKDAARFFFNLRSADSPIDFDLDLAKEQSNENPVFYVQYA 445 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNV--IPQESEFDTSELQLIVHLAEYPRVIENATIA 515 +AR SI RQ ++ ++ N+ + + E +LI LA +P I A Sbjct: 446 HARICSIIRQLEEEGVKIE------NIDEVDLSLLKEEEEKELIKKLAYFPEEITIAAKT 499 Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575 P+++ Y+ D+AS+FH ++ R V+ L R L+ AV ++I + L+ Sbjct: 500 LAPHRITRYVLDVASLFHSFYNSHR-------VKGVEEDLMKARFVLILAVKTVIKNALD 552 Query: 576 IIGVESPNEM 585 I+ + +P M Sbjct: 553 ILKITAPERM 562 >gi|254516119|ref|ZP_05128179.1| arginyl-tRNA synthetase [gamma proteobacterium NOR5-3] gi|219675841|gb|EED32207.1| arginyl-tRNA synthetase [gamma proteobacterium NOR5-3] Length = 560 Score = 327 bits (837), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 196/565 (34%), Positives = 298/565 (52%), Gaps = 44/565 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +ER RD AHG L++N A+ ++ L + P +A+ I + + +D IAG GFIN Sbjct: 29 IQVERTRDAAHGDLASNIALAAAKLLKMPPRELAQAICDALPENTAIDRTEIAGPGFINF 88 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +LS ++ ++ G ++G N G G KV +EFVSANPTGP+HVGH R A VGDTLA Sbjct: 89 FLSNDSQAAVVQDVLRQGAKFGHNNSGTGRKVQVEFVSANPTGPLHVGHGRGAAVGDTLA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ G+EV RE+Y NDAGAQIN L LSV R + L +D P+ Y G Y+ + + Sbjct: 149 RILDACGWEVVREFYYNDAGAQINNLGLSVQARC-KGLTPDDEGWPDDGYRGDYITELAQ 207 Query: 212 -----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 E + + + L +++++V + + DL++ + DIF E + Sbjct: 208 AYLAGESVEASDKSVTAAGDADDLDAIREFAVAWLRREQDLDLQSFGVAFDIFFLESSLY 267 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 + + ++ L G Y + L R+T GDD DR + K Sbjct: 268 --ESGEVESTVERLVESGNTY----------------VQDDALWLRTTSFGDDKDRVMRK 309 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ--INVL 384 DG YTYF D+AY K+ RGF+ +I G+DH V R+ A A+ E Q + Sbjct: 310 QDGGYTYFLPDVAYHLNKWRRGFERVINEQGADHHSTVTRVRAGLQALGEGIPQGWPEYV 369 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L ++V + RDG +K+SKRAG ++TLR ++ EVG D+ R+ ++ R + L FD Sbjct: 370 LHQMVTVMRDGQEVKLSKRAGSYLTLRDLITEVGRDATRYFLVARSPNSQLTFDIDLALS 429 Query: 445 QSKENPVFYVQYAYARCRSIFR----QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500 QS +NPVFY+QYA+AR S+ R Q + DLD R V PQ E++++ Sbjct: 430 QSNDNPVFYIQYAHARVCSVRRKFLEQGLPVDLDLDTVALDRLVEPQ-------EIEVLK 482 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 LA +P ++ A + EP ++A YL +LA FH +++ + V ++ +L RL Sbjct: 483 QLARFPEIVARAGTSAEPQQIANYLRELAGEFHAYYNAHK-------VLIDDEELRSARL 535 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 L AV +I +GL ++GV +P M Sbjct: 536 ALTTAVGQVIANGLELLGVSAPESM 560 >gi|167039271|ref|YP_001662256.1| arginyl-tRNA synthetase [Thermoanaerobacter sp. X514] gi|300913911|ref|ZP_07131228.1| arginyl-tRNA synthetase [Thermoanaerobacter sp. X561] gi|307725404|ref|YP_003905155.1| arginyl-tRNA synthetase [Thermoanaerobacter sp. X513] gi|166853511|gb|ABY91920.1| arginyl-tRNA synthetase [Thermoanaerobacter sp. X514] gi|300890596|gb|EFK85741.1| arginyl-tRNA synthetase [Thermoanaerobacter sp. X561] gi|307582465|gb|ADN55864.1| arginyl-tRNA synthetase [Thermoanaerobacter sp. X513] Length = 562 Score = 327 bits (837), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 197/548 (35%), Positives = 306/548 (55%), Gaps = 36/548 (6%) Query: 42 HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD---VDSVFIAGKGFINLYLSPSYL 98 HG L+ N AM++++ + P IAE+IV+ K+DP ++ + IAG GFIN +L +L Sbjct: 47 HGDLAINTAMVIAKQAKMPPKKIAEIIVS--KVDPSNTFIEKIEIAGPGFINFFLKDKFL 104 Query: 99 RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158 + L + G +YGR IG G KV +EFVSANPTGPMH+G+ R +GD LA+++ ++G Sbjct: 105 EETLKLVYERGKDYGRVNIGNGKKVQVEFVSANPTGPMHMGNARGGALGDALAAVLDYAG 164 Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218 Y+VTRE+YINDAG QI S+ RY Q L +++PEG Y G + +E + Y Sbjct: 165 YDVTREFYINDAGNQIEKFGYSLEARYLQ-LLGIPAEVPEGGYQGEDIIDRAREFLEIYG 223 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 + + P E + DY ++ ++ I++DL I++D++ SE + D + +I+ Sbjct: 224 DKYKDVPSEVRRKALIDYGLKKNLEKIKEDLALYGIEYDVWFSEQSLY--DSGEVYKVIE 281 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 L ++GY YE L F+ T+ G + D L++++G TY A+D+ Sbjct: 282 ELKQKGYTYE----------------KDGALWFKMTLFGAEKDDVLVRTNGFPTYLASDI 325 Query: 339 AYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397 AY K K+ RGFD +I V G+DH G+V ++ A+ +++V+L +LV+L G Sbjct: 326 AYHKNKFITRGFDWVINVWGADHHGHVAPMKGAMQALGIDPDRLDVVLMQLVKLIEGGQV 385 Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457 +KMSKR G +TLR ++DEVG D+ RF R +DFD KEQS ENPVFYVQYA Sbjct: 386 VKMSKRTGRMVTLRDLIDEVGKDAARFFFNMRSADSSIDFDLDLAKEQSNENPVFYVQYA 445 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 +AR SI RQ ++ +D + + + E +LI LA +P I A Sbjct: 446 HARICSIIRQLEEEGVKID----NIDEVDLSLLKEEEEKELIKKLAYFPEEITIAAKTLA 501 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 P+++ Y+ D+AS+FH ++ R V+ L R L+ AV ++I + L+I+ Sbjct: 502 PHRITRYVLDVASLFHSFYNSHR-------VKGVEEDLMKARYVLILAVKTVIKNVLDIL 554 Query: 578 GVESPNEM 585 + +P +M Sbjct: 555 KITAPEKM 562 >gi|270308440|ref|YP_003330498.1| arginyl-tRNA synthetase [Dehalococcoides sp. VS] gi|270154332|gb|ACZ62170.1| arginyl-tRNA synthetase [Dehalococcoides sp. VS] Length = 556 Score = 327 bits (837), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 193/561 (34%), Positives = 313/561 (55%), Gaps = 46/561 (8%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I IE P+ +G +T+ + L++ G P+ +AE++ I+ + V +A GFIN Sbjct: 35 ISIEHPQKTNYGDYATSLPLRLAKATGKRPMELAEILAGYIEPGEGIAKVSVAPPGFINF 94 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 S +L ++ +++ YG +G G++V IEFVSANPTGP+H+GH R AV+G TL+ Sbjct: 95 TFSKEWLCSLVKTVLGEAENYGNINMGGGSRVQIEFVSANPTGPIHIGHGRGAVLGSTLS 154 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ +GY V E+YINDAG+QI+ ++F RYQQAL ++ +P+ Y G Y+ + Sbjct: 155 NVLKAAGYYVEEEFYINDAGSQIDAFKRTLFARYQQAL-GKEAAVPQDGYHGQYMVELAA 213 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 E+ KY + L P E + + + M+ +I DDLK+L + D++ SE + G Sbjct: 214 EMVAKYGDKYLQMPLEIAQNDLGEIGMARMLCLISDDLKSLKVDFDVWFSERSLYSG--G 271 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + +D L+ Y+ E + T F ST++GD D +++SDG+ Sbjct: 272 QYKTAMDILSANNYIAE------RDNAT----------WFSSTLLGDSKDNVIVRSDGTP 315 Query: 332 TYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFA+D+AY K+ ER FD +I + G+DH G+V R++A+ +A+ ++ LL +++ Sbjct: 316 TYFASDIAYHYNKFIERKFDRVINIWGADHQGHVSRMKAMLSALGINPERLTTLLFQMIT 375 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L R G +++SKR G+ I+L V++EVG+D+ RF L R +DFD K++S ENP Sbjct: 376 LKRGGELVRLSKRTGEMISLSEVIEEVGADACRFFFLSRSTESQMDFDLELAKKESAENP 435 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT------SELQLIVHLAE 504 V+YVQYA+AR SI AK+ L + S DT +EL+L+ +AE Sbjct: 436 VYYVQYAHARICSILSLAKE--KGLSY-----------SGGDTALLGEEAELELVRKMAE 482 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 P ++E EP+ L +Y +LA+ FH + R V ++N +L+ RL+LV Sbjct: 483 LPEIVETVARTLEPHHLTYYAQELANAFHQFYKDCR-------VISDNTELSAARLKLVD 535 Query: 565 AVASIINSGLNIIGVESPNEM 585 A ++ L+++G+ SP M Sbjct: 536 ASRIVLARTLHLMGMTSPQSM 556 >gi|258543874|ref|ZP_05704108.1| arginine--tRNA ligase [Cardiobacterium hominis ATCC 15826] gi|258520880|gb|EEV89739.1| arginine--tRNA ligase [Cardiobacterium hominis ATCC 15826] Length = 592 Score = 326 bits (836), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 207/615 (33%), Positives = 315/615 (51%), Gaps = 67/615 (10%) Query: 9 SRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 S L L + K+E+ L + + R ++ AHG S+N AM ++ ++P AE Sbjct: 7 SGLTTALHAVARAQKIEEGQLTLPLELGRCKNPAHGDYSSNVAMQYAKTFQMNPRQFAEA 66 Query: 68 IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127 ++A + P + +V IAG GFIN+ L+ +L +IV G YGR+ K+ +EF Sbjct: 67 LIAALPAHPGIAAVEIAGPGFINIRLASGSDSAVLETIVREGAAYGRHQAEHPQKILLEF 126 Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187 VSANPTGP+HVGH R A G TLA+++ +G+ V EYY+NDAG Q++ LALSV+WRY Q Sbjct: 127 VSANPTGPLHVGHGRGAAYGATLANILRANGHHVDNEYYVNDAGRQMDILALSVYWRYMQ 186 Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI--------------- 232 + +D LP+G Y G Y+ + +E +Y + PE W+P Sbjct: 187 -ICGSDRTLPQGIYQGDYVVDIAREHYARYGDKHYRAPE-TWVPAHPAEWSEAAIDNGER 244 Query: 233 ----------------------VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 V D + A + IRDDL+ + D + SE Sbjct: 245 DAWIDAAIAALKNTLGEADYRAVFDAGLDAEVADIRDDLQEFGVTFDRWYSERALF--TD 302 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I +++ L +GY+YE D Q FR++ GD+ DR + + +G Sbjct: 303 GRIAEMLGVLRARGYLYE---------------KDGAQW-FRASDFGDEKDRVVTRENGI 346 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFA+D+AY KY+RG+D MI + G+DH GY+ R+ A AA+ ++++ L + Sbjct: 347 TTYFASDIAYHYDKYQRGYDRMIDIFGADHHGYMARVRASLAALGLAPEKLDITLVQFAV 406 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 LY+DG ++MS R+G F+TLR + +VGSD+ RF + RK + LDFD SK+NP Sbjct: 407 LYKDGAKMQMSTRSGQFVTLRDLRAQVGSDAARFFYVMRKPEQHLDFDLDLATSHSKDNP 466 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 +YVQYA+AR + +A++ + FD + +E + E L+ LA YP I Sbjct: 467 YYYVQYAHARTSRVLERAQE--EGVPFDT-QTALAQREHLTEPEEKTLLRELARYPDTIA 523 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A + + YL DLA +H ++ G + V ++ L RL L HAV ++ Sbjct: 524 AAGAQMAGHLIVNYLKDLAGAWHQYYDAGHK------VLHDDAALRDARLLLTHAVRQVL 577 Query: 571 NSGLNIIGVESPNEM 585 +GL+IIGV + M Sbjct: 578 RNGLDIIGVAARERM 592 >gi|256827094|ref|YP_003151053.1| arginyl-tRNA synthetase [Cryptobacterium curtum DSM 15641] gi|256583237|gb|ACU94371.1| arginyl-tRNA synthetase [Cryptobacterium curtum DSM 15641] Length = 575 Score = 326 bits (836), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 196/569 (34%), Positives = 308/569 (54%), Gaps = 42/569 (7%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +ERPRD A+G ++ A+ ++ +P IA+ IV I + +DSV IAG GFIN+ Sbjct: 33 ALERPRDLANGDWASTVALRSAKLAHTNPRQIAQAIVDHIPANNLIDSVDIAGAGFINIK 92 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKG-TKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+P+ + +++ + G+++G++ I +G T VNIE+VSANPTGP HVGH R A +GD A Sbjct: 93 LAPTAFQSVVAQVRQDGVDFGKSTIEEGYTNVNIEYVSANPTGPFHVGHGRWAALGDATA 152 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +M +GY V E YIND G+Q++ SV RYQQ L D ++PE Y G Y+K + + Sbjct: 153 RVMRHAGYTVYEENYINDHGSQMDNFGESVAVRYQQ-LLGRDVEMPESCYAGGYVKDIAQ 211 Query: 212 ELADKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 + D + L+ P+E+ + ++ + Q + A D + SE + D Sbjct: 212 SIIDTDGDKWLDADPDERRVNF-RERAYQFELAEQHRICDAFGTTFDKWFSERSLYVKDA 270 Query: 271 ---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 S + ID + +GY+YE + F+ST GDD DR ++KS Sbjct: 271 DGKSQVDRAIDAMREKGYIYES----------------DGAVWFKSTEFGDDKDRVVMKS 314 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387 +G TYF +D+AY K +RGF+++I + G+DH GYV R EA+ AA A + V+L + Sbjct: 315 NGETTYFTSDVAYHYDKMQRGFEHLIDLWGADHHGYVARCEAMLAAWGYPGA-LEVMLGQ 373 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 LV L+RDG P++MSKR G+ +T V+DEVG DS R+MML R + + +DFD K++ Sbjct: 374 LVNLFRDGKPVRMSKRTGEMVTFEEVIDEVGVDSTRWMMLSRSSDQTIDFDIEVAKKRDA 433 Query: 448 ENPVFYVQYAYARCRSIFRQAKDIF-------PDLDFDLFPRNVIPQESEFDT----SEL 496 NPV+YVQYA+AR SI R+A ++ + +IP ++ SE+ Sbjct: 434 SNPVYYVQYAHARICSILRKAAPADLAAKAESGEISMNELAHAIIPAHADLTGLTHPSEI 493 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 L+ + ++ +A + ++L Y DLA +FH + + V + L Sbjct: 494 DLMRKMDGLQDLVASAARDRAAFRLTHYSQDLAGLFHAFYGNCH-------VITEDESLQ 546 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L+ A ++ L ++G+ +P +M Sbjct: 547 NARLALIDATRIVLEISLGLLGISAPTKM 575 >gi|313894351|ref|ZP_07827916.1| arginine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412] gi|313441175|gb|EFR59602.1| arginine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412] Length = 577 Score = 326 bits (836), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 202/580 (34%), Positives = 308/580 (53%), Gaps = 60/580 (10%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 IV+E P G STN AM +R +P IAE +++ + D ++ +AG GFIN Sbjct: 32 IVLEVPPQKEFGDFSTNIAMQSARVARQNPRAIAEALISHMNFDW-LERAEVAGAGFINF 90 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +L + L +I+ +G +YG + + +E+VSANPTGP+HVGH R A G L Sbjct: 91 FLKSDMVYDTLKAILNAGDQYGVQPLRARDTIQVEYVSANPTGPLHVGHGRGAAYGSALV 150 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ---------ALYNNDS-----DLP 197 +L+ +GY V EYYINDAG QI+ +A+S+ +R+Q+ N D D+P Sbjct: 151 NLLRAAGYNVQSEYYINDAGNQIDNMAISIEYRFQELQGATLVFPPKRNEDGSMPEFDIP 210 Query: 198 EGY-------YPGVYLKHVGKELADKYSSELLN-FPEEKWLPIVKDYSVQAMMKIIRDDL 249 EG Y G + K +A++ + LN E + + K+ ++ + + + L Sbjct: 211 EGALVFPENGYRGPDIIETAKAIAEREGFDKLNAMNEADRIALFKEEGLKEKLARLEETL 270 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 + + D + SE H + I I+ L G VYE L Sbjct: 271 RNFRVTFDNWFSERTVH--ETEEIHHSIEALKVLGKVYE----------------KNGAL 312 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369 +ST GDD DR +++ +G TY AAD+AY + KY+RGF MI + G+DH GYV R++A Sbjct: 313 WLKSTDYGDDKDRVVIRDNGVPTYLAADIAYHRSKYDRGFKEMIDIWGADHHGYVCRVKA 372 Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429 AA Q+ +LL ++V L+RDG +K+SKR+GD +TL ++DEVG D+ R+ L R Sbjct: 373 AMAAFGYDPDQLTILLLQMVALFRDGELVKLSKRSGDSVTLDELIDEVGVDASRYFFLMR 432 Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489 LDFD K +S +NPV+Y+QYA+AR SI+ Q ++ + F + E+ Sbjct: 433 SLDSQLDFDINLAKSRSNDNPVYYIQYAHARIHSIYNQVRE--AGIAFGDY------SET 484 Query: 490 EFDT----SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 +F T EL+LI LAEYP + + + P+++A YLYDLAS+FH + GR Sbjct: 485 DFTTLTSEMELELIKKLAEYPEEVVQSAEHRAPHRIARYLYDLASMFHSFYRQGR----- 539 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + L RL L+ A+A ++ GL I+G+ +P +M Sbjct: 540 --IIGVDPALQQARLGLITAIALVLRQGLGILGISAPEKM 577 >gi|297618464|ref|YP_003703623.1| arginyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680] gi|297146301|gb|ADI03058.1| arginyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680] Length = 559 Score = 326 bits (836), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 196/582 (33%), Positives = 317/582 (54%), Gaps = 34/582 (5%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D ++ L++ K + + VIE PR+ HG + N AM+L+R + P+ I Sbjct: 10 DLRQKIVTALEKAKTGGKFNYQEIPAFVIEVPREKQHGDYACNVAMLLARQARMSPVAIG 69 Query: 66 ELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL-IGKGTKV 123 + I+ + + DP + V + G GFIN +L +L + + SG YG++ +GK KV Sbjct: 70 QAIIDLLPQNDPLISRVEVKGAGFINFFLKEDWLFDVPRVVWQSGESYGQHKPVGK--KV 127 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EFVSANPTG +H+G+ R +GD+LA++++ +GYEV REYY+NDAG QI LS+ Sbjct: 128 QVEFVSANPTGDLHMGNARGGAIGDSLANILSMAGYEVEREYYVNDAGNQIELFGLSLEA 187 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 RY + L + PEG Y G + + + Y L+ + + +++++ ++ Sbjct: 188 RYLE-LCGCEFRFPEGGYEGQDVVETVRHFIEAYGDYLVGANPYERRQKLTEFALKEKLE 246 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L+A I++D++ SE H D I ++ + L +GY+Y Sbjct: 247 SIKTSLEAFGIRYDVWFSEQSLH--DSGKIEEVTEELKTKGYLY---------------- 288 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 + FR+ + D +++ +G TYFAAD+AY K K+ERGFD +I V G+DH G+ Sbjct: 289 LKEGAWWFRAGEDSGEKDEVVIRKNGLPTYFAADIAYHKNKFERGFDWVINVWGADHHGH 348 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 V R++A AA+ +++V+L +LVRLYR G ++MSKR G +TL +++EVG D+ R Sbjct: 349 VARMKAAIAALGYDPNRLDVILMQLVRLYRGGELVRMSKRTGTLVTLDELLEEVGKDAAR 408 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 F + R LDFD ++QS+ENPV+YVQYA+AR SI RQA+ L + Sbjct: 409 FFFVMRSPDSHLDFDMELAQKQSQENPVYYVQYAHARICSIMRQAERA----GILLKNPD 464 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + EL+L+ +AE+P I A P+++A Y+ DLA +FH +++H R Sbjct: 465 EVNLRLLCLPEELELLRKVAEFPNEISMAAATLSPHRIARYVLDLAGMFHSYYNHHR--- 521 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V L R+ L+ A+ ++ + L ++GV +P M Sbjct: 522 ----VLNEEENLRDARMVLMEAIRRVVKNSLGVLGVSAPERM 559 >gi|254521562|ref|ZP_05133617.1| arginyl-tRNA synthetase [Stenotrophomonas sp. SKA14] gi|219719153|gb|EED37678.1| arginyl-tRNA synthetase [Stenotrophomonas sp. SKA14] Length = 562 Score = 326 bits (836), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 196/569 (34%), Positives = 306/569 (53%), Gaps = 54/569 (9%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 V+ERP+ HG +TNAAM+L++ +P +A+ +V + DV V IAG GFIN + Sbjct: 32 VVERPKTRDHGDFATNAAMLLAKAARSNPRALAQALVEALPRSEDVSKVEIAGPGFINFH 91 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L+P+ ++ +S++ G +YGRNL G G V +E+VSANPTGP+HVGH R A +GD +A Sbjct: 92 LAPAAYQREAASVIKEGHDYGRNLSGNGRTVGVEYVSANPTGPLHVGHGRAAAIGDCVAR 151 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 ++ +G+ RE+Y NDAG QI LALS R + + D PEG Y G Y+ V + Sbjct: 152 VLDANGWNAKREFYYNDAGVQIENLALSTQARIKGIAPDQDG-WPEGGYRGEYIADVARA 210 Query: 213 L-----ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 D S ++ + + ++ ++V + DL A + DI+ E + Sbjct: 211 YMAGASVDLEGSTVVGAKDPDDMQAIRRFAVAYLRNEQNLDLAAFGVDFDIYFLESSLYA 270 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 + + + L G+ YE + L RST GDD DR + KS Sbjct: 271 --DGKVAEAVAKLQASGHTYE----------------EGGALWLRSTDFGDDKDRVMRKS 312 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLL 385 DG++TYF D+AY K++RG++ I +G+DH G + R+ A A V + +L Sbjct: 313 DGTFTYFVPDVAYHLSKWQRGYERAITELGADHHGSLARVRAGLQAMEVGIPQGWPEYVL 372 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 ++V + R G +K+SKRAG + TLR +++E G D+ R+ ++ RK L FD ++Q Sbjct: 373 HQMVTVMRGGEEVKLSKRAGSYFTLRDLIEEAGRDATRWFLIARKPDSQLTFDIDLARQQ 432 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE--------FDTSELQ 497 S +NPVFYVQYA+AR S+ RQA++ + ++ +++ D + L Sbjct: 433 SNDNPVFYVQYAHARVCSLLRQAQE-----------KGLVYEQANGLANLGRLADDASLL 481 Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN-NRKLT 556 L+ ++ YP V+E A ++ EP+ +A YL +LA FH W HG P L A+ N KLT Sbjct: 482 LMNEISRYPEVVEAAGVSMEPHLVAQYLRELAHAFH-TWYHG--TPVLVDDAADRNAKLT 538 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 L A ++ +GL+++GV +P +M Sbjct: 539 -----LACAARQVLANGLDLLGVSAPEKM 562 >gi|57233947|ref|YP_181982.1| arginyl-tRNA synthetase [Dehalococcoides ethenogenes 195] gi|109894986|sp|Q3Z717|SYR_DEHE1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|57224395|gb|AAW39452.1| arginyl-tRNA synthetase [Dehalococcoides ethenogenes 195] Length = 556 Score = 326 bits (836), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 195/561 (34%), Positives = 312/561 (55%), Gaps = 46/561 (8%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I IE P+ +G +T+ + L++ G P+ +AE++ I+ + V +A GFIN Sbjct: 35 ISIEHPQKTNYGDYATSLPLRLAKATGKRPMELAEILAGYIEPGEGIAKVSVAPPGFINF 94 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 S +L ++ +I+ YG +G G++V IEFVSANPTGP+H+GH R AV+G TL+ Sbjct: 95 TFSKEWLCNLVKTILGEAESYGNINMGGGSRVQIEFVSANPTGPIHIGHGRGAVLGSTLS 154 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ +GY V E+YINDAG+QI+ ++F RYQQAL ++ +P+ Y G Y+ + Sbjct: 155 NVLKAAGYYVEEEFYINDAGSQIDAFKRTLFARYQQAL-GKEAAVPQDGYHGQYMVELAA 213 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 E+ KY + L P E + + + M+ +I DDLK+L + D++ SE + G Sbjct: 214 EMVAKYGDKYLQMPLEIAQNDLGEIGMARMLCLISDDLKSLKVDFDVWFSERSLYSG--G 271 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + +D L Y+ E + T F ST++GD D +++SDG+ Sbjct: 272 QYKTAMDILLANNYIAE------RDNAT----------WFSSTLLGDSKDNVIVRSDGTP 315 Query: 332 TYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFA+D+AY K+ ER FD +I + G+DH G+V R++A+ +A+ ++ LL +++ Sbjct: 316 TYFASDIAYHYNKFIERKFDRVINIWGADHQGHVSRMKAMLSALGINPERLTTLLFQMIT 375 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L R G +++SKR G+ I+L V++EVG+D+ RF L R +DFD K++S ENP Sbjct: 376 LKRGGELVRLSKRTGEMISLSEVIEEVGADACRFFFLSRSTESQMDFDLELAKKESAENP 435 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT------SELQLIVHLAE 504 V+YVQYA+AR SI AK+ L + S DT +EL+LI +AE Sbjct: 436 VYYVQYAHARICSILSLAKE--KGLSY-----------SGGDTALLGEEAELELIRKMAE 482 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 P ++E EP+ L +Y +LA+ FH + R V ++N +L+ RL+LV Sbjct: 483 LPEIVETVARTLEPHHLTYYAQELANAFHQFYKDCR-------VISDNTELSSARLKLVD 535 Query: 565 AVASIINSGLNIIGVESPNEM 585 A ++ L+++G+ SP M Sbjct: 536 ASRIVLARTLHLMGMTSPQSM 556 >gi|237749364|ref|ZP_04579844.1| arginyl-tRNA synthetase [Oxalobacter formigenes OXCC13] gi|229380726|gb|EEO30817.1| arginyl-tRNA synthetase [Oxalobacter formigenes OXCC13] Length = 571 Score = 326 bits (836), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 200/574 (34%), Positives = 310/574 (54%), Gaps = 54/574 (9%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87 + +ERPRD +HG ++ N AM LS+PL +P IA+ I++ + +P ++S IAG G Sbjct: 32 VALERPRDASHGDIACNIAMQLSKPLKKNPREIAQTILSSLMTNPLHQGLIESGEIAGPG 91 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FINL L+ S + ++ +++ +YG + G G KV +EFVSANPTGP+HVGH R +G Sbjct: 92 FINLRLTASAKQDVVKAVMDQKDKYGYSNTGTGRKVMVEFVSANPTGPLHVGHGRQGALG 151 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D++++L A GY+VTRE+Y NDAG QI+ L LSV R + L + PE Y G Y+ Sbjct: 152 DSISALFASQGYDVTREFYYNDAGVQIDNLTLSVQAR-AKGLKPGEEGWPESAYNGDYIA 210 Query: 208 HVG------KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 + K +A + + + L +++++V + +DL A I D F Sbjct: 211 DIATDFLAKKTVAARNCETVTASGDPDDLKSIREFAVAYLRNEQDNDLNAFGIHFDNFFL 270 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E +R ++D +D L ++G +E L R+T GDD D Sbjct: 271 ESSLYR--DGKVKDAVDTLTKEGKTFE----------------SEGALWLRTTEYGDDKD 312 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--KA 379 R + K+DG+YTYF D+AY K+ RGFD +I + GSDH G V R+ A V++ KA Sbjct: 313 RVMRKTDGTYTYFVPDVAYHINKFSRGFDKVINIQGSDHHGTVARVRAGLQGVNKGIPKA 372 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS-------DSVRFMMLWRKNS 432 + +L ++V + +DG +K+SKRAG ++T+R +++ G+ D+VRF ++ RK Sbjct: 373 FPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIEWSGAGDVVRGRDAVRFFLISRKAD 432 Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVIPQESEF 491 FD QS ENPV+YVQYA+AR S+F Q LD DL P Sbjct: 433 TEFVFDVDLALSQSDENPVYYVQYAHARICSVFSQWGGDESALDNVDLSPLT-------- 484 Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551 E L+ L++YP ++ A P+ +AFYL +LA HG+++ RF+ Sbjct: 485 SPHEYALLSKLSDYPDILTRAQEELSPHLVAFYLRELAGELHGYYN------AERFL-VE 537 Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + RL L+ A ++ +GL ++GV +P +M Sbjct: 538 DETVKLARLALLKATRQVLRNGLALLGVSAPTKM 571 >gi|217969154|ref|YP_002354388.1| arginyl-tRNA synthetase [Thauera sp. MZ1T] gi|217506481|gb|ACK53492.1| arginyl-tRNA synthetase [Thauera sp. MZ1T] Length = 587 Score = 326 bits (836), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 202/596 (33%), Positives = 308/596 (51%), Gaps = 79/596 (13%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I++ERP+ +HG +TN A+ L++PL +P +A L++A + V +AG GFIN Sbjct: 29 ILLERPKQASHGDFATNLALQLAKPLKRNPRELAGLLLAELPPSKLVARAEVAGAGFINF 88 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+ ++ ++ G ++GR GKG KV +EFVSANPTGP+HVGH R A G +L+ Sbjct: 89 TLASDAKTAVVREVLARGADFGRG-AGKGIKVQVEFVSANPTGPLHVGHGRGAAYGASLS 147 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++AF+GYEV+REYY+NDAG Q++ LALS + RY A + + P Y G Y+ +G+ Sbjct: 148 DVLAFAGYEVSREYYVNDAGRQMDILALSTWLRYL-AFFGIEIPFPPNAYQGDYVVDMGR 206 Query: 212 ELADKYSSELLNFPEEKWL---------------------------------------PI 232 E+ D + + L P Sbjct: 207 EMRDAHQDRFAKVTAMQILAGTPGLPPSDRKDDEAKQQREEHLDALIANAKKLLGEDYPW 266 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 V +++ + R+DL+ ++ D + SE D + + L + GY+Y Sbjct: 267 VHGFALNEQLGDGREDLQEFGVRFDKWFSEQSLF--DTGLVERAVTQLEKAGYIY----- 319 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 + FRST GD+ DR + + +G +TYFA+D+AY KYERGFD M Sbjct: 320 -----------LQDGAKWFRSTAFGDEKDRVVQRENGLFTYFASDIAYHLNKYERGFDRM 368 Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412 I + G+DH GY+ R++ AA+ A+++V L + LYRDG MS R+G+F+TLR Sbjct: 369 IDIWGADHHGYIPRVKGAIAALGLDPARLDVALVQFAVLYRDGQKTSMSTRSGEFVTLRE 428 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 + EVG+D+ RF + RK+ + LDFD K QS ENPV+YVQYA+AR S+ Q Sbjct: 429 LRREVGNDACRFFYVLRKSDQHLDFDLDLAKSQSNENPVYYVQYAHARVCSVLDQWGGEA 488 Query: 473 PDL---DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 +L D L + EL L LA + ++++A P+++AFYL DLA Sbjct: 489 AELAGADLGLLQ----------NERELALCARLASFAELVQDAAAGYAPHQIAFYLKDLA 538 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + FH ++ R + + L + RL L AV ++ +GL ++GV +P M Sbjct: 539 ADFHSWYNAER-------MLVEDEALKLARLALAAAVRQVLVTGLKMLGVSAPESM 587 >gi|282849795|ref|ZP_06259179.1| arginine--tRNA ligase [Veillonella parvula ATCC 17745] gi|282580732|gb|EFB86131.1| arginine--tRNA ligase [Veillonella parvula ATCC 17745] Length = 577 Score = 326 bits (836), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 204/583 (34%), Positives = 307/583 (52%), Gaps = 66/583 (11%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 IV+E P G STN AM +R +P IAE +++ + D ++ +AG GFIN Sbjct: 32 IVLEVPPQKEFGDFSTNIAMQSARVARQNPRAIAEALISHMNFDW-LERAEVAGAGFINF 90 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +L + L +I+ +G EYG + + +E+VSANPTGP+HVGH R A G L Sbjct: 91 FLKSDMVYDTLKAILNAGTEYGVQPLRARDTIQVEYVSANPTGPLHVGHGRGAAYGSALV 150 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ---------ALYNNDS-----DLP 197 +L+ +GY V EYYINDAG QI+ +A+S+ +R+Q+ N D D+P Sbjct: 151 NLLRAAGYNVQSEYYINDAGNQIDNMAISIEYRFQELQGATLVFPPKRNEDGSMPEFDIP 210 Query: 198 EGY-------YPGVYLKHVGKELADKYSSELLN-FPEEKWLPIVKDYSVQAMMKIIRDDL 249 EG Y G + K +A++ + LN E + + K+ ++ + + + L Sbjct: 211 EGALVFPENGYRGPDIIETAKAIAEREGFDKLNAMNEVDRIALFKEEGLKEKLARLEETL 270 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 + + D + SE H D I ++ L G VYE L Sbjct: 271 RNFRVTFDNWFSERTVHESDE--IHHSVEALKALGKVYE----------------KDGAL 312 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369 +ST GDD DR +++ +G TY AAD+AY + KY+RGF MI + G+DH GYV R++A Sbjct: 313 WLKSTDYGDDKDRVVIRDNGVPTYLAADIAYHRNKYDRGFKEMIDIWGADHHGYVCRVKA 372 Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429 AA ++ VLL ++V L+RDG +K+SKR+GD +TL +++EVG D+ R+ L R Sbjct: 373 AMAAFGYDPDKLTVLLLQMVALFRDGRLVKLSKRSGDSVTLDELIEEVGVDASRYFFLMR 432 Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIP 486 LDFD K +S +NPV+Y+QYA+AR SI+ Q + F D + Sbjct: 433 SLDSQLDFDINLAKSRSNDNPVYYIQYAHARIHSIYNQVHEAGIAFGDYN---------- 482 Query: 487 QESEFDT----SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 E++F T EL+LI LAEYP + A + P+++A YLYDLAS+FH + GR Sbjct: 483 -ETDFTTLTSEMELELIKKLAEYPEEVVQAAEHRAPHRIARYLYDLASMFHSFYRQGR-- 539 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + L RL L+ A+A ++ GL I+G+ +P +M Sbjct: 540 -----IIGVDPALQQARLGLITAIALVLRQGLGILGISAPEKM 577 >gi|312898221|ref|ZP_07757612.1| arginyl-tRNA synthetase [Megasphaera micronuciformis F0359] gi|310620718|gb|EFQ04287.1| arginyl-tRNA synthetase [Megasphaera micronuciformis F0359] Length = 554 Score = 326 bits (835), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 194/555 (34%), Positives = 302/555 (54%), Gaps = 33/555 (5%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +++E P G +TN AM +R P IA++++ + P ++ +AG GFIN Sbjct: 32 VLLEVPPQKEFGDFATNIAMQSARIAHKSPRMIADVLLKHLDA-PWLEKAEVAGAGFINF 90 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +L + L I+ G +YG+ + V +E+VSANPTGP+HVGH R A G L Sbjct: 91 FLKHDIIYDTLCHILEQGKQYGQAPLRAEDTVQVEYVSANPTGPLHVGHGRGAAYGSALV 150 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +L+ +GY V EYYINDAG Q+N LA SV RY + L +++PE Y G + + Sbjct: 151 NLLRAAGYNVQSEYYINDAGNQMNNLAASVNARYLE-LLGKKAEIPENGYHGADIIDTAR 209 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 + ++ + L E+ L I K+ + + +K ++ DL++ N+ D + SE H P Sbjct: 210 AIIEQDGDKYLQMDEKDRLEIFKNRAYEEKLKALKRDLESFNVTFDKWFSERTLH---PE 266 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 I+ + L G +YE L +ST GDD DR +++ +G Sbjct: 267 AIKKACETLKGNGNMYE----------------KDGALWLKSTAYGDDKDRVVIRDNGVP 310 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 TY AAD+AY K KYER F +I + G+DH GYV R++A AA+ Q+ +LL ++V L Sbjct: 311 TYLAADIAYHKNKYERQFKKLINIWGADHHGYVARVKAAMAALGLDPNQLEILLLQMVSL 370 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 +R+G +KMSKR G ITL +++EVG+D+ R+ + R LDFD K S ENPV Sbjct: 371 FRNGELVKMSKRTGQAITLNELIEEVGTDAARYFFIMRSLDTQLDFDLDLAKSHSNENPV 430 Query: 452 FYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 +Y+QYA AR SI++Q I + D FD+ +N I + + EL LI +A YP I Sbjct: 431 YYIQYANARIFSIYKQ---IAENGDVFDMTWKN-IKWDKLKEERELALIKKMAAYPEEIR 486 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A + P+++A ++Y++A +FH +++ +Q+ +++L RL LV AV I Sbjct: 487 KAAAERAPHRIAHFVYEMAGLFHAFYNN------CHIIQS-DKELEEARLALVTAVQITI 539 Query: 571 NSGLNIIGVESPNEM 585 + L ++G+ +P M Sbjct: 540 ANCLAVLGISAPETM 554 >gi|170781869|ref|YP_001710201.1| arginyl-tRNA synthetase [Clavibacter michiganensis subsp. sepedonicus] gi|189083527|sp|B0RAP7|SYR_CLAMS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|169156437|emb|CAQ01585.1| arginyl-tRNA synthetase [Clavibacter michiganensis subsp. sepedonicus] Length = 554 Score = 326 bits (835), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 190/557 (34%), Positives = 292/557 (52%), Gaps = 35/557 (6%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 D +V+ERPR+ HG +TN AM +++PLG P TIA I + P V V +AG GFI Sbjct: 32 DMVVLERPRNRDHGDWATNIAMRIAKPLGESPRTIAADIAKALGELPQVAKVDVAGPGFI 91 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N+ L + + +IV SG YGR +G ++N+EFVSANPTGP+H+G R A VGD+ Sbjct: 92 NITLEAAAAGALAHTIVESGPAYGRGHSLEGIRINLEFVSANPTGPIHLGGVRWAAVGDS 151 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 LA ++ G +VTREYY ND G+QI+ A S+ + + PE Y G Y+ + Sbjct: 152 LARILQAEGADVTREYYFNDHGSQIDRFARSLLASHL------GEETPEDGYGGAYIGEI 205 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 + + + Y ++ E + + + M I+ L + D+F ED H + Sbjct: 206 AERVVEGYEGDIDALTREAQQEVFRKSGTELMFGEIKQKLHDFGVDFDVFFHEDSLH--E 263 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + I L G+V+E + + R+T GDD DR +++S G Sbjct: 264 SGAVDRAIARLTELGHVFE----------------EDGAIWLRTTTFGDDRDRVVIRSTG 307 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCEL 388 Y + DL Y+ K ERGF+ I ++G+DH GYV R+ A+ A + + +L+ ++ Sbjct: 308 EPAYISGDLGYYLDKRERGFEQNIIMLGADHHGYVGRMMAMVEAFGDTPGVNLQILIGQM 367 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V L RDG P++MSKRAG +TL +VD VG D+ R+ ++ + LD D + +++ + Sbjct: 368 VNLLRDGEPVRMSKRAGTIVTLDDLVDAVGVDAGRYALVRSSADQNLDIDLAVLGKRTND 427 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 NPVFYVQYA+AR ++ R A D R+ E +E L+ L E+PR+ Sbjct: 428 NPVFYVQYAHARTCAVDRNAAASGVD-------RSAFAPELLTHPTESALLGLLQEFPRI 480 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 + A +EP+++A Y+ +LA +H + R PR L RL L AV Sbjct: 481 VAQAAELREPHRVARYVEELAGSYHRWYDSCRVVPR---GDEEVTDLHRTRLWLNDAVRQ 537 Query: 569 IINSGLNIIGVESPNEM 585 ++ +GLN++GV +P M Sbjct: 538 VVANGLNLVGVSAPERM 554 >gi|296128906|ref|YP_003636156.1| arginyl-tRNA synthetase [Cellulomonas flavigena DSM 20109] gi|296020721|gb|ADG73957.1| arginyl-tRNA synthetase [Cellulomonas flavigena DSM 20109] Length = 560 Score = 325 bits (834), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 198/564 (35%), Positives = 303/564 (53%), Gaps = 43/564 (7%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 +R+ IERPR HG +TN A+ L++ G +P AE + R+ P V +V +AG GF+ Sbjct: 32 ERVHIERPRQREHGDWATNVALQLAKKAGSNPRAFAEELARRLADVPGVAAVDVAGPGFL 91 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N+ L + ++ IV G YGRN G KVN+EFVSANPTGP+H+G R A VGD Sbjct: 92 NIRLDAAAAGELARGIVEQGAGYGRNATFAGLKVNLEFVSANPTGPLHIGGVRWAAVGDA 151 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 LA ++ SG EVTREYY ND GAQI+ A S+ R + + PE Y G Y+ + Sbjct: 152 LARVLQASGAEVTREYYFNDHGAQIDRFARSLVARARG------EEAPEDGYGGQYIADI 205 Query: 210 G-KELADKYSS---ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 + +AD ++ + P+ + + V+ M I+ L + D++ ED Sbjct: 206 ADRVIADAQAAGEPDPRTLPDAEATEAFRARGVELMFAEIKTSLHDFGVDFDVYFHEDSL 265 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 H + + ++ L G+++E L R+T GDD DR ++ Sbjct: 266 H--ESGAVERAVERLRASGHMFEA----------------DGALWLRTTAFGDDKDRVVV 307 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKKAQINVL 384 KSDG Y A D+AY+ K ERGFD ++ ++GSDH GYV R+ AV AA E + +L Sbjct: 308 KSDGQAAYIAGDIAYYLDKRERGFDRVVIMLGSDHHGYVGRMMAVCAAFGDEPHVNLELL 367 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 + +LV L +DG P++MSKRAG IT+ +V+ VG D+ R+ + + + +D D + + Sbjct: 368 IGQLVNLVKDGEPVRMSKRAGTIITIDDLVEAVGVDAARYALSRSSSDQQIDLDLDLLAK 427 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 + ENPVFYVQYA+AR ++ R A + + D F +++ E SE +L+ LA+ Sbjct: 428 ATNENPVFYVQYAHARTAAMARNAAEAGVRRE-DGFDASLLDHE-----SEAKLLGLLAD 481 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT---MMRLQ 561 +PRV+ A +EP+++A Y D+A +H + R R V + +LT RL Sbjct: 482 FPRVVAQAADLREPHRVARYAEDVAGAYHKWYDQKR-----RVVPWGDEELTDAHRTRLW 536 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 L A ++ + L+++GV +P M Sbjct: 537 LNDATRQVLANALDLLGVSAPERM 560 >gi|251772529|gb|EES53095.1| arginyl-tRNA synthetase [Leptospirillum ferrodiazotrophum] Length = 589 Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 212/595 (35%), Positives = 314/595 (52%), Gaps = 65/595 (10%) Query: 26 KKILDRIV-----IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80 + +LDR + +E P+ G LST AM L++ +G P +A I+ ++ P+ S Sbjct: 25 QDVLDRTLARGVRLEWPKKEEFGDLSTPMAMSLAKDMGKTPRHVAGTILESLRQIPETSS 84 Query: 81 VF----IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 +F IAG G++N + S Y L + R I K +N+EFVSANPTGP+ Sbjct: 85 LFSKVDIAGPGYLNFFFSSPYFSDFLVQCLSGSALVDRVAIPK--NINVEFVSANPTGPL 142 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 HVGH R A GD+LA ++ G++V+ EYYINDAG Q+N L SV+ +++ + S+ Sbjct: 143 HVGHGRGAAFGDSLARILREVGHDVSTEYYINDAGNQMNMLGKSVYLAFRKLTGHESSEE 202 Query: 197 -------PEGYYPGVYLKHVGKE----------------LADKYSSELLNFPEEKWLPIV 233 EGY G Y+ + KE LA +++ ++ +F Sbjct: 203 KVRLLGDTEGYR-GDYIAGIAKEILDNPKGLPDALREDVLAGRFTDQVQSF--------F 253 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 D S + +M+ IR+DL + D + SE H + I L R L Sbjct: 254 TDVSQRRIMEGIREDLDRFGVTFDRYFSEKTLHEKGADGLSSIARWLTR--------LEK 305 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353 D L FR+T + DD DR L KSDGSYTYFAAD+AY K +RG+D M+ Sbjct: 306 ESDGAVYASD---GALWFRTTAMADDKDRVLRKSDGSYTYFAADIAYHADKVDRGYDIMV 362 Query: 354 YVMGSDHSGYVKRLEAVAAAVSEK-KAQINVLLC--ELVRLYRDGMPIKMSKRAGDFITL 410 V G+DH GY R++AVA +S++ K Q+++ +C +LV L RDG + MS RAG+F+TL Sbjct: 363 DVWGADHHGYQARMQAVAKVLSDRAKRQVDLKICLIQLVSLLRDGKAVSMSTRAGEFVTL 422 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 V+DEVG D+ RF L R + L+FD K KE+S +NPV+YVQYA+AR +S+ QAK Sbjct: 423 AEVLDEVGVDATRFSYLTRSHESALEFDLSKAKERSMDNPVYYVQYAHARVKSLLAQAKS 482 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 + D P + P E + + LI +A++ V+ A + E + L YL LA Sbjct: 483 RGVTIG-DFHPEDFSPLE---EPAARSLIRLMAQFSGVLHRAAESFEVHPLTDYLTALAG 538 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +H ++ H R+ + +R + M R+ L AV I+ SGL ++GV +P+ M Sbjct: 539 AYHHYYFH----HRILSAEDADRPVMMARIGLSMAVGRILASGLALLGVRAPDSM 589 >gi|291287007|ref|YP_003503823.1| arginyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809] gi|290884167|gb|ADD67867.1| arginyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809] Length = 549 Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 186/553 (33%), Positives = 300/553 (54%), Gaps = 33/553 (5%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 IE P + HG + NAAM +R P+ IA+ + R+K P + GFIN + Sbjct: 30 TIEVPNNSEHGDFAANAAMKSARIFRTKPMDIAKKLCERVK-HPMIKKSEAVMPGFINFF 88 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 + + ++ + ++ G+ K +EFVSANPTGP+HVGH R A GD+LA Sbjct: 89 IDNGFYHDVVKRAATDDSFFESDM-GQKRKTMVEFVSANPTGPLHVGHGRNAAYGDSLAK 147 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 ++A +G++V EYY+NDAG Q+N L S++ RY + L + PE Y G Y+ + KE Sbjct: 148 ILAAAGFDVHTEYYVNDAGNQMNNLGKSIYVRYME-LAGGEIPFPEDGYHGEYIIDIAKE 206 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 L +++ ++ PE++ + ++ + I + LK + + + SE + P Sbjct: 207 LFEEHGHKIAEMPEKEGTDVCFKKGLKDITANIANTLKNFKVDMEEYFSEKSLYENGDVP 266 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 +D L +G++YE +D L F+ST GDD DR + +S+G YT Sbjct: 267 AS--LDYLKERGFIYE---------------LD-GALWFKSTEFGDDKDRVVKRSNGEYT 308 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 YFA+D+AY K KY+RGF I V G+DH GYVKRL + A+ + + V L ++V L Sbjct: 309 YFASDIAYHKNKYDRGFKTTIDVWGADHHGYVKRLSSAIEAIGYEDREFAVSLIQMVNLV 368 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 G + MS RAG FI L +++EVGSD+ R+ R DFD K++ +NPVF Sbjct: 369 NGGERVSMSTRAGSFIELDWLINEVGSDASRYFYSMRDYEAQFDFDIALAKKRESDNPVF 428 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 Y+QYA+AR +S+ R+A + + N+ +E EL+LI + +Y V+E + Sbjct: 429 YIQYAHARVQSVLRKAAEENIAYEICAGLDNLNSKE------ELELIKKIYDYINVLEQS 482 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572 ++P+++ +YL +LA++FH ++ + + + ++N+ LT RL L AV + I + Sbjct: 483 ARNRQPHRVGYYLQELAAMFHSYYFNN------KMLNSDNKDLTSARLTLAQAVGNTIRN 536 Query: 573 GLNIIGVESPNEM 585 GL ++GV +P+ M Sbjct: 537 GLALLGVSAPDRM 549 >gi|269798641|ref|YP_003312541.1| arginyl-tRNA synthetase [Veillonella parvula DSM 2008] gi|269095270|gb|ACZ25261.1| arginyl-tRNA synthetase [Veillonella parvula DSM 2008] Length = 577 Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 202/580 (34%), Positives = 307/580 (52%), Gaps = 60/580 (10%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 IV+E P G STN AM +R +P IAE +++ + ++ +AG GFIN Sbjct: 32 IVLEVPPQKEFGDFSTNIAMQSARVARQNPRAIAEALISHMNF-AWLERAEVAGAGFINF 90 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +L + L +I+ +G EYG + + +E+VSANPTGP+HVGH R A G L Sbjct: 91 FLKSDMVYDTLKAILNAGTEYGVQPLRARDTIQVEYVSANPTGPLHVGHGRGAAYGSALV 150 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ---------ALYNNDS-----DLP 197 +L+ +GY V EYYINDAG QI+ +A+S+ +R+Q+ N D D+P Sbjct: 151 NLLRAAGYNVQSEYYINDAGNQIDNMAISIEYRFQELQGATLVFPPKRNEDGSMPEFDIP 210 Query: 198 EGY-------YPGVYLKHVGKELADKYSSELLN-FPEEKWLPIVKDYSVQAMMKIIRDDL 249 EG Y G + K +A++ + LN E + + K+ ++ + + + L Sbjct: 211 EGALVFPENGYRGPDIIETAKAIAEREGFDKLNAMNEADRVALFKEEGLKEKLARLEETL 270 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 + + D + SE H D I ++ L G VYE L Sbjct: 271 RNFRVTFDNWFSERTVHETDE--IHHSVEALKALGKVYE----------------KEGAL 312 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369 +ST GDD DR +++ +G TY AAD+AY + K++RGF MI + G+DH GYV R++A Sbjct: 313 WLKSTDYGDDKDRVVIRDNGVPTYLAADIAYHRNKFDRGFKEMIDIWGADHHGYVCRVKA 372 Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429 AA ++ VLL ++V L+RDG +K+SKR+GD +TL ++DEVG D+ R+ L R Sbjct: 373 AMAAFGYDPDKLTVLLLQMVALFRDGQLVKLSKRSGDSVTLDELIDEVGVDASRYFFLMR 432 Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489 LDFD K +S +NPV+Y+QYA+AR SI+ Q ++ + F + E+ Sbjct: 433 SLDSQLDFDINLAKSRSNDNPVYYIQYAHARIHSIYNQVRE--AGIAFGDY------SET 484 Query: 490 EFDT----SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 +F T EL+LI LAEYP + A + P+++A YLYDLAS+FH + GR Sbjct: 485 DFTTLTSEMELELIKKLAEYPEEVVQAAEHRAPHRIARYLYDLASMFHSFYRQGR----- 539 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + L RL L+ A+A ++ GL I+G+ +P +M Sbjct: 540 --IIGVDPALQQARLGLITAIALVLRQGLGILGISAPEKM 577 >gi|303230487|ref|ZP_07317246.1| arginine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6] gi|302514853|gb|EFL56836.1| arginine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6] Length = 577 Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 201/580 (34%), Positives = 308/580 (53%), Gaps = 60/580 (10%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 IV+E P G STN AM +R +P IAE +++ + D ++ +AG GFIN Sbjct: 32 IVLEVPPQKEFGDFSTNIAMQSARVARQNPRAIAETLISHMDFDW-LERAEVAGAGFINF 90 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +L + L +I+ +G +YG + + +E+VSANPTGP+HVGH R A G L Sbjct: 91 FLKSDMVYDTLKAILNAGDQYGVQPLRARDTIQVEYVSANPTGPLHVGHGRGAAYGSALV 150 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ---------ALYNNDS-----DLP 197 +L+ +GY V EYYINDAG QI+ +A+S+ +R+Q+ N D D+P Sbjct: 151 NLLRAAGYNVQSEYYINDAGNQIDNMAISIEYRFQELQGATLVFPPKRNEDGSMPEFDIP 210 Query: 198 EGY-------YPGVYLKHVGKELADKYSSELLN-FPEEKWLPIVKDYSVQAMMKIIRDDL 249 EG Y G + K +A++ S+ LN E + + K+ ++ + + + L Sbjct: 211 EGALVFPENGYRGPDIIETAKAIAEREGSDTLNAMNEADRVALFKEEGLKEKLARLEETL 270 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 + D + SE H D I ++ L G VYE L Sbjct: 271 SNFRVTFDNWFSERTVHEADE--IHHSVEALKALGKVYE----------------KDGAL 312 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369 +ST GDD DR +++ +G TY AAD+AY + KY+RGF MI + G+DH GYV R++A Sbjct: 313 WLKSTDYGDDKDRVVIRDNGVPTYLAADIAYHRNKYDRGFKEMIDIWGADHHGYVCRVKA 372 Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429 AA ++ VLL ++V L+RDG +K+SKR+GD +TL +++EVG D+ R+ L R Sbjct: 373 AMAAFGYDPDKLTVLLLQMVALFRDGQLVKLSKRSGDSVTLDELIEEVGVDASRYFFLMR 432 Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489 LDFD K +S +NPV+Y+QYA+AR SI+ Q ++ + F + E+ Sbjct: 433 SLDSQLDFDINLAKSRSNDNPVYYIQYAHARIHSIYNQVRE--AGIAFGDY------SET 484 Query: 490 EFDT----SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 +F T EL+LI LAEYP + + + P+++A YL+DLAS+FH + GR Sbjct: 485 DFTTLTSEMELELIKKLAEYPEEVVQSAEHRAPHRIARYLFDLASMFHSFYRQGR----- 539 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + L RL L+ A+A ++ GL I+G+ +P +M Sbjct: 540 --IIGVDPSLQQARLGLITAIALVLRQGLGILGISAPEKM 577 >gi|296271958|ref|YP_003654589.1| arginyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299] gi|296096133|gb|ADG92083.1| arginyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299] Length = 530 Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 189/558 (33%), Positives = 310/558 (55%), Gaps = 43/558 (7%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 L+ +V+E+P+D + GH +T A L++ L +P+ IA+ + + K DSV A KGF Sbjct: 15 LENLVLEKPKDISLGHFATPVAFSLAKELRKNPMQIAQELADKFKDSEIFDSV-TAVKGF 73 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 +N LS ++L ++S + + + K K+ +E+VSANPTGP+H+GH R A+ GD Sbjct: 74 VNFKLSNTFLENLISKLFEDENSFAKGE-NKNEKILLEYVSANPTGPLHIGHARGAIFGD 132 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 TLA + GY+V EYYINDAGAQ++ L LSV ++ L N + PE YY G YL Sbjct: 133 TLARVGRHLGYDVQTEYYINDAGAQMDMLGLSVSLAGREFLLNETVEYPESYYRGEYLVD 192 Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 + KE+ + ++ N +E + ++ ++KII+ DLK + I+ D FISE+ + Sbjct: 193 IAKEIQKNFGDDIFN--DESRFREMAMFAKDEVLKIIKKDLKDIGIEFDTFISENSLY-- 248 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 S D + L + G +YE +++ RST GDD DR +++ + Sbjct: 249 --SSWEDTKNVLEKNGSLYE----------------KDEKVFLRSTAHGDDSDRVVVRDN 290 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 G TY A D+ Y K KY+R FD I + G+DH GY+ R++A + +++ ++L ++ Sbjct: 291 GIPTYLAGDIIYHKNKYDRNFDRYINIWGADHHGYITRVKAAIEFLGNDSSKLEIILSQM 350 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V+L + G P KMSKR G+FI + + +E+G+D++RF+ L RK+ L+FD +K Q Sbjct: 351 VQLLKGGEPYKMSKRKGNFILMSDISEEIGADALRFVFLTRKSDTHLEFDLETLKNQDSS 410 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE-SEFDTSELQLIVHLAEYPR 507 NPVFY+ YA+AR +F +A +L P++V+ ++ + + + LI P Sbjct: 411 NPVFYINYAHARINQVFVKA---------NLTPKDVLNEKFGDLNEDSINLIYEALLLPT 461 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 VI A ++ K+ YLY+LAS H ++ E+ L + N+ L+++ V+ Sbjct: 462 VISEAFEKRDMQKITDYLYNLASSVHKFYN---EHKILETQEQNS------YLKVLSVVS 512 Query: 568 SIINSGLNIIGVESPNEM 585 I +GL ++G+E+ M Sbjct: 513 LSIRTGLKLLGIEAKEVM 530 >gi|239917325|ref|YP_002956883.1| arginyl-tRNA synthetase [Micrococcus luteus NCTC 2665] gi|281414195|ref|ZP_06245937.1| arginyl-tRNA synthetase [Micrococcus luteus NCTC 2665] gi|259511651|sp|C5CA60|SYR_MICLC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|239838532|gb|ACS30329.1| arginyl-tRNA synthetase [Micrococcus luteus NCTC 2665] Length = 556 Score = 325 bits (833), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 207/601 (34%), Positives = 324/601 (53%), Gaps = 68/601 (11%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 L A S+ L + + D + + I R+ +ERPR HG +TN A+ L + G+ P Sbjct: 6 LSALLSAVLTDAVDAGDLPAALREGITPARVKVERPRSREHGDWATNVALQLGKKAGMAP 65 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +A L+ R+ P + +V +AG GF+N+ L + + IV +G EYGRN G Sbjct: 66 RDLAGLVAERLTGKPGIAAVDVAGPGFLNVTLDAASAGALAREIVEAGPEYGRNDTLAGH 125 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 VN+EFVSANPTGP+H+GH R A +GD +A L+ SG +VT EYY+NDAG Q+N A SV Sbjct: 126 TVNMEFVSANPTGPLHIGHTRWAALGDAIARLLRASGADVTAEYYVNDAGNQMNVFADSV 185 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE---LLNFPEEKWLPIVKDYSV 238 R + D+P G YPG Y+ +ELAD + E + +E P+V++ + Sbjct: 186 LARL------HGRDVPAGGYPGAYV----QELADAVALEHPDVRELTDEAARPVVREAAY 235 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + M+ I+D L A ++ D+F SE H D I + L QG++ Sbjct: 236 RLQMQDIKDTLAAFDVHFDVFTSEQTLH--DSGAIDQAVQRLREQGHIE----------- 282 Query: 299 TQKCDMDRKQLLF-RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 DR+ ++ ++T GDD DR L++++G TYFAAD AY+ K +RGF+ +Y++G Sbjct: 283 ------DREGAVWLKTTDFGDDKDRVLIRANGEPTYFAADAAYYLHKRDRGFEEKVYLLG 336 Query: 358 SDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 +DH GYV RL+A+AAA + A I +L+ +L+ + +G K+SKRAG+ I L+ +V+ Sbjct: 337 ADHHGYVNRLKAIAAAAGDDPATNIEILIGQLISV--NGA--KLSKRAGNIIELKDLVEW 392 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 +G D++R+ + L D ++ + +NPV+YVQYA+AR R A+ D Sbjct: 393 LGRDALRYDLARYPADSPLTIDPELLRSATNDNPVYYVQYAHARASGAARTAQAHGVD-- 450 Query: 477 FDLFPRNVIPQESEFD------TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 SEFD +E +L+ LAE+P V+ A +EP+++ +L +A Sbjct: 451 -----------RSEFDAALLTHATESELLAQLAEFPAVVAAAARLREPHRVTRHLEVIAG 499 Query: 531 VFHGHWSHGR------ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 +H ++ R ++ R V+ NR RL L A A ++ +GL ++GV +P + Sbjct: 500 AYHSWYAACRIVPMPTDDGTPRPVETLNR----TRLWLNDATAQVLANGLGLLGVSAPEK 555 Query: 585 M 585 M Sbjct: 556 M 556 >gi|306781626|ref|ZP_07419963.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu002] gi|306784014|ref|ZP_07422336.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu003] gi|306788377|ref|ZP_07426699.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu004] gi|306792704|ref|ZP_07431006.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu005] gi|306797110|ref|ZP_07435412.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu006] gi|306802990|ref|ZP_07439658.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu008] gi|306807180|ref|ZP_07443848.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu007] gi|306967379|ref|ZP_07480040.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu009] gi|308325587|gb|EFP14438.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu002] gi|308331249|gb|EFP20100.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu003] gi|308335065|gb|EFP23916.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu004] gi|308338873|gb|EFP27724.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu005] gi|308342558|gb|EFP31409.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu006] gi|308346421|gb|EFP35272.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu007] gi|308350364|gb|EFP39215.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu008] gi|308354993|gb|EFP43844.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu009] Length = 550 Score = 325 bits (833), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 204/592 (34%), Positives = 308/592 (52%), Gaps = 56/592 (9%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LK + + ++ L ++V +ERPR HG ++N AM L+ +G +P Sbjct: 4 ADLAELLKATAAAVLAERGLDASALPQMVTVERPRIPEHGDYASNLAMQLANKVGTNPRE 63 Query: 64 IAELIV-ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +A + A K+D + S +AG GFIN+ L + K+++S++ +G YG +L+ G K Sbjct: 64 LAGWLAEALTKVD-GIASAEVAGPGFINMRLETAAQAKVVTSVIDAGHSYGHSLLLAGRK 122 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VN+EFVSANPTGP+H+G R A VGD L L+ G +V REYY ND GAQI+ A S+ Sbjct: 123 VNLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGADVVREYYFNDHGAQIDRFANSLI 182 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 + P+ Y G Y+ ++ +++ K + + L+ P+ + + V M Sbjct: 183 AAAK------GEPTPQDGYAGSYITNIAEQVLQK-APDALSLPDAELRETFRAIGVDLMF 235 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 I+ L D++ ED H G + + I L G +YE K T Sbjct: 236 DHIKQSLHEFGTDFDVYTHEDSMHTG--GRVENAIARLRETGNIYE------KDGAT--- 284 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 R++ GDD DR ++KSDG Y A DLAY+ K +RGFD IY++G+DH G Sbjct: 285 -------WLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHG 337 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 Y+ RL+A AAA + A + VL+ ++V L RDG P++MSKRAG +TL +V+ +G D+ Sbjct: 338 YIARLKAAAAAFGDDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAA 397 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 R+ ++ +D D S ENP +YVQYA+AR ++ R A ++ Sbjct: 398 RYSLIRSSVDTAIDIDLALWSSASNENPAYYVQYAHARLSALARNAAEL----------- 446 Query: 483 NVIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 +IP DT+ L+L+ H L E+PRV+E A +EP+++ YL DLA +H Sbjct: 447 ALIP-----DTNHLELLNHDKEGTLLRTLGEFPRVLETAASLREPHRVCRYLEDLAGDYH 501 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R P+ L RL L A +I +GL IIGV +P M Sbjct: 502 RFYDSCRVLPQ---GDEQPTDLHTARLALCQATRQVIANGLAIIGVTAPERM 550 >gi|237747206|ref|ZP_04577686.1| arginyl-tRNA synthetase [Oxalobacter formigenes HOxBLS] gi|229378557|gb|EEO28648.1| arginyl-tRNA synthetase [Oxalobacter formigenes HOxBLS] Length = 571 Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 202/584 (34%), Positives = 313/584 (53%), Gaps = 55/584 (9%) Query: 24 VEKKILDR---IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80 E + LD+ + +ERPRD +HG ++ N AM L++PL +P IA+ I++ + +P+ +S Sbjct: 21 TEGQNLDKHPSVSLERPRDASHGDIACNIAMQLAKPLKKNPRQIAQTILSSVLSNPEHES 80 Query: 81 VF----IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 + IAG GFINL L+ S + ++ +++ +YG G G KV +EFVSANPTGP+ Sbjct: 81 LIESGEIAGPGFINLRLTSSAKQSVVKTVIKQKEKYGFGNQGAGKKVMVEFVSANPTGPL 140 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 HVGH R +GD +++L GY VTRE+Y NDAG QI L LSV R + L D+ Sbjct: 141 HVGHGRQGALGDAISTLFETQGYSVTREFYYNDAGVQIENLTLSVQAR-AKGLKPGDAGW 199 Query: 197 PEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250 PE Y G Y+ + GK L + + + L +++++V + K +DL Sbjct: 200 PESAYNGDYIADIAADFLAGKTLEARNCQPVTGSGNVEDLKSIREFAVAYLRKEQDNDLN 259 Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310 A I D F E +R +++ +D L ++G +E L Sbjct: 260 AFGIHFDNFFLESSLYR--DGKVQETVDTLTKEGKTFE----------------SEGALW 301 Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 ++T GDD DR + K+DG+YTYF D+AY K++RGFD +I V GSDH G V R+ A Sbjct: 302 LKTTEYGDDKDRVMRKTDGTYTYFVPDVAYHINKWKRGFDKVINVQGSDHHGTVARVRAG 361 Query: 371 AAAVSEK--KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------EVGSDS 421 AV++ + +L ++V + +DG +K+SKRAG ++T+R +++ E G D+ Sbjct: 362 LQAVNQDIPPGFPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIEWSGAGDVERGRDA 421 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 VRF ++ RK FD +S ENPV+YVQYA+AR S+F Q L+ Sbjct: 422 VRFFLISRKADTEFVFDVDLALSRSDENPVYYVQYAHARICSVFSQWGGNESVLEHADLS 481 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 V P E+ L+ LA+YP ++ A P+ +AFYL +LA HG+++ Sbjct: 482 ALVSPHEN-------ALLTKLADYPDILVRALDELSPHLVAFYLRELAGELHGYYN---- 530 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 RF+ N+ + RL L+ A ++ +GL ++GV +P +M Sbjct: 531 --AERFL-VNDEPTKLARLALLKATRQVLRNGLALLGVSAPVKM 571 >gi|325066827|ref|ZP_08125500.1| arginyl-tRNA synthetase [Actinomyces oris K20] Length = 561 Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 192/563 (34%), Positives = 300/563 (53%), Gaps = 47/563 (8%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +ERPR+ HG STN AM L++ P +AEL+V R++ + SV +AG GF+N+ L Sbjct: 35 VERPRNRDHGDWSTNVAMQLAKKASTKPRDLAELLVPRLEALDGIASVEVAGPGFLNIRL 94 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + ++ SIV +G YGRN G +N+E+VSANPTGP+H+G R A VGD+LA + Sbjct: 95 DAASAGELARSIVEAGQAYGRNDSLSGQHINLEYVSANPTGPVHLGGARWAAVGDSLARI 154 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 ++ G +VTREYY ND G QI+ A S+ + + PE Y G Y+ + +++ Sbjct: 155 LSACGAQVTREYYFNDHGTQIDRFARSLLASAR------GQETPEDGYGGAYISEIAQQV 208 Query: 214 -ADKYSS---ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 AD+ ++ + P+ + + + V M ++ +L A D+F ED H Sbjct: 209 TADELAAGRPDPATLPDAEATEVFRSRGVDLMFAAVKAELHAFRSDFDVFFHEDSLHTS- 267 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + I L +G + E + T R+T GDD DR L+KSDG Sbjct: 268 -GAVERAIARLRERGVIEE------RDGAT----------WLRTTDFGDDKDRVLIKSDG 310 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCEL 388 + YFAADLAY+ K ERG D +Y++G+DH GY+ R+ A+ AA + + +L+ +L Sbjct: 311 NAAYFAADLAYYLDKRERGADCAVYLLGADHHGYIGRMMAMCAAFGDTPGTNMQILIGQL 370 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V L R+G+P++MSKRAG +TL +VD VG D+ R+ + ++D D + + Sbjct: 371 VNLVRNGVPVRMSKRAGTIVTLEDLVDAVGVDAARYALARSSMDSMIDIDLDLLASSISD 430 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF------DTSELQLIVHL 502 NPV+YVQYA+AR R++ R A + D P E+ F D ++ L+ L Sbjct: 431 NPVYYVQYAHARTRNVARNAAEHGVSRD---------PNEAPFEPGALDDPADAALLGVL 481 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 A++P + A +E +++A YL LA+ +H + R PR + + RL L Sbjct: 482 AQFPATVAQAAQLREQHRVARYLEQLAAAYHAWYGATRVTPRGDDAVDSGH---VARLWL 538 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 AV ++ +GL+++GV +P M Sbjct: 539 NDAVGQVLANGLDLLGVSAPERM 561 >gi|30248381|ref|NP_840451.1| arginyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718] gi|39932153|sp|Q82XC1|SYR_NITEU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|30138267|emb|CAD84275.1| Arginyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718] Length = 586 Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 197/591 (33%), Positives = 312/591 (52%), Gaps = 72/591 (12%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 +I + RP+ HG S+N AM L+R L +PL +A+ ++ + V+ +AG GFIN Sbjct: 32 QIELLRPKLADHGDYSSNLAMKLARRLRRNPLELAKALIGALPDSSCVEKADVAGGGFIN 91 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +L + ++ L +++ +G +G + +G G + IEFVSANPTGP+HVGH R A G +L Sbjct: 92 FFLKKTAKQQFLHAVLQAGDSFGHSRLGAGKTIQIEFVSANPTGPLHVGHGRGAAFGASL 151 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A++M +GY VTRE+Y+NDAG Q++ L LS + RY L P Y G Y+ + Sbjct: 152 ANIMTAAGYAVTREFYVNDAGRQMDILTLSTWLRYLD-LCGLSFSFPANAYRGQYVADMA 210 Query: 211 KEL----ADKY---------------SSELLNFPEEKWLPIV--------KDYS------ 237 E+ D+Y +S ++ +E+ ++ +DY+ Sbjct: 211 SEIYQAQGDRYAHRSDATIRQLTEISTSTTIDSEDERLDRLITAAKSILDQDYADLHNFV 270 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 + + R+DL ++ + + SE +L G V + K Sbjct: 271 LTEQLADCRNDLMEFGVEFETWFSEQ---------------SLFDSGMVARAVQLLDDKK 315 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 + D L FRST GD+ DR + + +G YTYFA+D+AY KYERGFD ++ + G Sbjct: 316 LLYRQD---GALWFRSTDFGDEKDRVVQRENGLYTYFASDIAYHLSKYERGFDYLLNIWG 372 Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 +DH GY+ R++ A+S ++ + L + LYRDG + MS R+G+F+TLR + EV Sbjct: 373 ADHHGYIPRVKGAIEALSLDPGRLEIALVQFAVLYRDGKKVSMSTRSGEFVTLRQLRQEV 432 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ---AKDIFPD 474 G+D+ RF + RK+ + LDFD K QS +NPV+YVQYA+AR S+ Q A+DI Sbjct: 433 GNDAARFFYVLRKSDQHLDFDLDLAKSQSNDNPVYYVQYAHARICSVLGQWGGAEDILAR 492 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 + +L D +EL L+ + ++ IE A + P+ +AF+L +LA FH Sbjct: 493 AETELLT----------DPAELVLLQKMIDFTDTIEAAAKERAPHLIAFFLRELAGEFHS 542 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++ RF+ + L + RL L+ AV I++ GL ++GV +P EM Sbjct: 543 YYNS------TRFL-VEDESLKITRLALISAVRQILSKGLTLLGVTAPREM 586 >gi|288942805|ref|YP_003445045.1| arginyl-tRNA synthetase [Allochromatium vinosum DSM 180] gi|288898177|gb|ADC64013.1| arginyl-tRNA synthetase [Allochromatium vinosum DSM 180] Length = 593 Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 196/595 (32%), Positives = 307/595 (51%), Gaps = 72/595 (12%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +ER +D AHG ++N AM+L++P P +A+ +V + P V V IAG GFIN Sbjct: 30 IQVERAKDSAHGDFASNLAMLLAKPARAKPRDLAQQLVDALPASPLVARVEIAGPGFINF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +L+ R ++ I+ +G +YGR+ IG G +V +EFVSANPTGP+HVGH R A G +A Sbjct: 90 FLAEDAYRTLVPRILDAGPDYGRSHIGAGQRVQVEFVSANPTGPLHVGHGRGAAYGAVVA 149 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG- 210 L+ G++V REYY+NDAG Q++ L SV+ RY + L + P Y G Y+ + Sbjct: 150 DLLEAVGFDVHREYYVNDAGRQMDILGTSVWLRYLE-LCGEELRFPSNGYKGDYVWDIAA 208 Query: 211 ---KELADKYSSE----LLNFPEEKWLPI------------------------------- 232 +E D Y E P + P+ Sbjct: 209 TLHREHGDAYRVEAEQVFAGLPADA--PVEGEPQDQTGDKEAHIDGLIAAAKRLLGDNRY 266 Query: 233 --VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290 V + + ++ IR+DL + + + SE + + I+ L G+VYE Sbjct: 267 RYVFELGLNTILDDIREDLAQFGVTYQEWYSERSL--TESGAVNRAIERLRESGHVYE-- 322 Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350 L FRST GD+ DR +++ +G TYFA+D+AY K ERGFD Sbjct: 323 --------------QNGALWFRSTAFGDEKDRVVVRENGQSTYFASDIAYHMDKLERGFD 368 Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 +I + G+DH GY+ R++A A+ + +++VLL + LYR G +MS R+G+F+TL Sbjct: 369 RVIDIWGADHHGYIPRVKAALQALGDDADKLDVLLVQFAILYRGGEKAQMSTRSGEFVTL 428 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R + EVG D+ RF + R+ + +DFD K +S +NPV+YVQYA+AR ++ RQA + Sbjct: 429 RELRQEVGRDAARFFYVMRRCEQHMDFDLDLAKSESSDNPVYYVQYAHARICAVLRQAAE 488 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 ++ N+ E + E L+ L YP +E A + EP+++ YL +LA+ Sbjct: 489 RGLAVEPSAGTHNL---ERLTEAHEQALLRTLGRYPETVEQAALKAEPHQITHYLRELAN 545 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H +++ +P L ++ L R++L+ A ++ +GL +IGV +P M Sbjct: 546 DLHTYYN---AHPFL----VDDSALRDARIKLILATRQVLRNGLGLIGVSAPETM 593 >gi|190572467|ref|YP_001970312.1| arginyl-tRNA synthetase [Stenotrophomonas maltophilia K279a] gi|229558810|sp|B2FJW0|SYR_STRMK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|190010389|emb|CAQ43997.1| arginyl-tRNA synthetase [Stenotrophomonas maltophilia K279a] Length = 562 Score = 324 bits (830), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 198/562 (35%), Positives = 303/562 (53%), Gaps = 40/562 (7%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 V+ERP+ HG +TNAAM+L++ +P +A+ +V + DV V IAG GFIN + Sbjct: 32 VVERPKTRDHGDFATNAAMLLAKAARSNPRALAQALVEALPRSEDVSKVEIAGPGFINFH 91 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L+P+ ++ +S++ +YGRNL G G V +E+VSANPTGP+HVGH R A +GD +A Sbjct: 92 LAPAAYQREAASVIKEAHDYGRNLSGNGRTVGVEYVSANPTGPLHVGHGRAAAIGDCVAR 151 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 ++ +G+ RE+Y NDAG QI LALS R + + D PEG Y G Y+ V + Sbjct: 152 VLDANGWNAKREFYYNDAGVQIENLALSTQARIKGIAPDQDG-WPEGGYRGEYIADVARA 210 Query: 213 L-----ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 D S ++ + + ++ ++V + DL A + DI+ E + Sbjct: 211 YMAGASVDLEGSTVVGAKDPDDMQAIRRFAVAYLRNEQNLDLAAFGVDFDIYFLESSLYA 270 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 + + + L G+ YE + L RST GDD DR + KS Sbjct: 271 --DGKVAEAVAKLQASGHTYE----------------EGGALWLRSTDFGDDKDRVMRKS 312 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLL 385 DG++TYF D+AY K++RG++ I +G+DH G + R+ A A V + +L Sbjct: 313 DGTFTYFVPDVAYHLSKWQRGYERAITELGADHHGSLARVRAGLQAMEVGIPQGWPEYVL 372 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 ++V + R G +K+SKRAG + TLR +++E G D+ R+ ++ RK L FD ++Q Sbjct: 373 HQMVTVMRGGEEVKLSKRAGSYFTLRDLIEEAGRDATRWFLIARKPDSQLTFDIDLARQQ 432 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAE 504 S +NPVFYVQYA+AR S+ RQA++ L ++ N + D + L L+ ++ Sbjct: 433 SNDNPVFYVQYAHARVCSLLRQAQE--KGLVYE--QGNGLANLGRLADDASLLLMNEISR 488 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN-NRKLTMMRLQLV 563 YP V+E A +A EP+ +A YL +LA FH W HG P L A+ N KLT L Sbjct: 489 YPEVVEAAGVALEPHLVAQYLRELAHAFH-TWYHG--TPVLVEDAADRNAKLT-----LA 540 Query: 564 HAVASIINSGLNIIGVESPNEM 585 A ++ +GL ++GV +P +M Sbjct: 541 CAARQVLANGLELLGVSAPEKM 562 >gi|303228773|ref|ZP_07315591.1| arginine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a] gi|302516572|gb|EFL58496.1| arginine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a] Length = 577 Score = 324 bits (830), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 201/580 (34%), Positives = 307/580 (52%), Gaps = 60/580 (10%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 IV+E P G STN AM +R +P IAE +++ + D ++ +AG GFIN Sbjct: 32 IVLEVPPQKEFGDFSTNIAMQSARVARQNPRAIAETLISHMDFDW-LERAEVAGAGFINF 90 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +L + L +I+ +G +YG + + +E+VSANPTGP+HVGH R A G L Sbjct: 91 FLKSDMVYDTLKAILNAGDQYGVQPLRARDTIQVEYVSANPTGPLHVGHGRGAAYGSALV 150 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ---------ALYNNDS-----DLP 197 +L+ +GY V EYYINDAG QI+ +A+S+ +R+Q+ N D D+P Sbjct: 151 NLLRAAGYNVQSEYYINDAGNQIDNMAISIEYRFQELQGATLVFPPKRNEDGSMPEFDIP 210 Query: 198 EGY-------YPGVYLKHVGKELADKYSSELLN-FPEEKWLPIVKDYSVQAMMKIIRDDL 249 EG Y G + K +A++ + LN E + + K+ ++ + + + L Sbjct: 211 EGALVFPENGYRGPDIIETAKAIAEREGFDTLNAMNEADRVALFKEEGLKEKLARLEETL 270 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 + D + SE H D I ++ L G VYE L Sbjct: 271 SNFRVTFDNWFSERTVHETDE--IHHSVEALKALGKVYE----------------KNGAL 312 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369 +ST GDD DR +++ +G TY AAD+AY + KY+RGF MI + G+DH GYV R++A Sbjct: 313 WLKSTDYGDDKDRVVIRDNGVPTYLAADIAYHRNKYDRGFKEMIDIWGADHHGYVCRVKA 372 Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429 AA ++ VLL ++V L+RDG +K+SKR+GD +TL +++EVG D+ R+ L R Sbjct: 373 AMAAFGYDPDKLTVLLLQMVALFRDGQLVKLSKRSGDSVTLDELIEEVGVDASRYFFLMR 432 Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489 LDFD K +S +NPV+Y+QYA+AR SI+ Q ++ + F + E+ Sbjct: 433 SLDSQLDFDINLAKSRSNDNPVYYIQYAHARIHSIYNQVRE--AGIAFGDY------SET 484 Query: 490 EFDT----SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 +F T EL+LI LAEYP + + + P+++A YLYDLAS+FH + GR Sbjct: 485 DFTTLTSEMELELIKKLAEYPEEVVQSAEHRAPHRIARYLYDLASMFHSFYRQGR----- 539 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + L RL L+ A+A ++ GL I+G+ +P +M Sbjct: 540 --IIGVDPSLQQARLGLITAIALVLRQGLGILGISAPEKM 577 >gi|256825648|ref|YP_003149608.1| arginyl-tRNA synthetase [Kytococcus sedentarius DSM 20547] gi|256689041|gb|ACV06843.1| arginyl-tRNA synthetase [Kytococcus sedentarius DSM 20547] Length = 547 Score = 323 bits (828), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 191/573 (33%), Positives = 312/573 (54%), Gaps = 51/573 (8%) Query: 19 DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV 78 D +I VE I + +ERP+D HG ++N A+ L++ G++P AE++ AR++ V Sbjct: 20 DGQIAVE--IPAEVRVERPKDRNHGDWASNIALQLAKKAGMNPREFAEIVAARLREAEGV 77 Query: 79 DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138 +V IAG GF+N+ L + ++ +IV YG N G +N+EF+SANPTG +HV Sbjct: 78 AAVDIAGPGFLNITLDAASAGELARTIVEGDATYGNNDALTGHTINLEFISANPTGHLHV 137 Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198 GH R A +GD++ L+A SG +VT EYYINDAGAQ++ SV PE Sbjct: 138 GHTRWAALGDSMRRLLAASGADVTAEYYINDAGAQMDKFGASVL------AAAKGEPTPE 191 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 G YPG Y++ +G A + +L P+++ + ++ M++ I+D L A + D+ Sbjct: 192 GGYPGEYVQELGA-AALEQRPDLAELPQDEAVTAARELGYPMMLQQIKDTLDAFGVHFDV 250 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + SE H + ++ L QG+VYE + + R+T D Sbjct: 251 WFSEASLH--SSGLVEKAVERLREQGHVYE----------------EGGAVWLRTTDFTD 292 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378 D DR L++++G TYFA+D AY+ K +RGF IY++G+DH GYV RL+A++AA + Sbjct: 293 DKDRVLVRANGEPTYFASDAAYYLSKKDRGFTEKIYLLGADHHGYVNRLKAISAAAGDDP 352 Query: 379 AQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437 A+ I + + +L+ + ++SKRAG+ + LR +++ +G+D++R+ + L+ Sbjct: 353 AKDIEIRIGQLISIN----GARLSKRAGNVVDLRDMLEWIGADAIRYSLGRYPADTPLEL 408 Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFR--QAKDIFPDLDFDLFPRNVIPQESEFDTSE 495 D ++++Q+ +NPVFYVQYA+AR ++ R A + FD N D +E Sbjct: 409 DGEELRKQTNDNPVFYVQYAHARTANVARLAAADGVSRAEGFDPSLLN--------DPTE 460 Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555 L+ L ++PRV+ A +EP+++A YL LA FH + R PR + ++ Sbjct: 461 ATLLAALGDFPRVVAQAAELREPHRVARYLEGLAGAFHKWYDACRVRPR------DGEEV 514 Query: 556 TMM---RLQLVHAVASIINSGLNIIGVESPNEM 585 T + RL L A ++ GL+++GV +P M Sbjct: 515 TDLHRSRLMLNDATGVVLRRGLDLLGVSAPERM 547 >gi|160934061|ref|ZP_02081448.1| hypothetical protein CLOLEP_02924 [Clostridium leptum DSM 753] gi|156866734|gb|EDO60106.1| hypothetical protein CLOLEP_02924 [Clostridium leptum DSM 753] Length = 563 Score = 323 bits (828), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 193/558 (34%), Positives = 302/558 (54%), Gaps = 37/558 (6%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF-IAGKGFINL 91 IE P D +HG +TN AM+ ++ + P IAE + + F IAG GFIN Sbjct: 38 TIETPADPSHGDFATNVAMVSAKAFHMAPRKIAEALSPYFEFSSTYFEKFEIAGPGFINF 97 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +LSP + +L I YGR+ GKG K+N+EFVSANPTGPMH+G+ R +GD LA Sbjct: 98 FLSPRFYAAVLQDIEALQDGYGRSDFGKGKKINVEFVSANPTGPMHMGNARGGALGDCLA 157 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVG 210 +++ +GY+V+RE+YINDAG QI+ ALS+ RYQQ ++ +PE Y G + Sbjct: 158 AVLDAAGYQVSREFYINDAGNQIDKFALSLDIRYQQIFKGEEAVPMPEDCYQGADILERA 217 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 +E AD Y L +E+ + D+++ + ++ DLK I++D + E H + Sbjct: 218 QEFADLYGDSCLEKSQEERQKALVDFALPKNIAKMQSDLKKYRIEYDTWFHESVLH--ND 275 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I+D + L +G YE +D L +++T G + D L++ +G+ Sbjct: 276 GEIQDTLKILMEKGMTYE---------------LD-GALWYKATDFGAEKDEVLVRKNGN 319 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFAAD+AY + K++RGFD I + G+DH G+V R++ AV ++++V+L +LV+ Sbjct: 320 PTYFAADIAYHRNKFQRGFDRCIDIWGADHHGHVARMKGAMNAVGLDGSKLDVVLMQLVK 379 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L R+G ++MSKR G I L ++DEV D+ RF+ R+ + ++FD +Q +NP Sbjct: 380 LVRNGEIVRMSKRTGKAIQLADLLDEVPVDAARFLFNMREANSQMEFDLDLAVQQDAQNP 439 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF---DTSELQLIVHLAEYPR 507 V+YVQYA+AR SI + L+ D + +E EL LI HLA Y Sbjct: 440 VYYVQYAHARICSILKA-------LEKDGVVKRACSEEELLLLVQPEELSLIRHLAAYTG 492 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 + +A +P ++ Y+ DLA++FH ++ R V+ L RL L AV Sbjct: 493 EVVSAAKDYDPARITRYVIDLANLFHKFYNACR-------VKGEEDSLCQARLTLCVAVK 545 Query: 568 SIINSGLNIIGVESPNEM 585 ++I++ L + + +P M Sbjct: 546 TVIHNVLTMFKISAPESM 563 >gi|253997684|ref|YP_003049748.1| arginyl-tRNA synthetase [Methylotenera mobilis JLW8] gi|253984363|gb|ACT49221.1| arginyl-tRNA synthetase [Methylotenera mobilis JLW8] Length = 552 Score = 323 bits (828), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 191/561 (34%), Positives = 300/561 (53%), Gaps = 40/561 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I++ERP+ HG +TN A+IL++PL +P IA I+ + + IAG GFIN Sbjct: 25 IILERPKSADHGDFATNLALILAKPLKQNPRAIATQIIEALPTSEYIAKTEIAGAGFINF 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +LSP + ++ I+ +G +YGRN GK KV +EFVSANPTGP+HVGH R A VGD LA Sbjct: 85 FLSPQSKQVVIKDILNAGAQYGRNSSGKQQKVQVEFVSANPTGPLHVGHGRGAAVGDCLA 144 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 L+ +G++VTRE+Y NDAGAQI+ L +SV R + ++S PE Y G Y+ + Sbjct: 145 RLLDANGWDVTREFYYNDAGAQIDNLTISVLARCKGISTEHES-FPENGYRGEYINDIAA 203 Query: 212 ELADKYSS-----ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 K++ E+ + L ++ +SV + DLKA I+ D+F E + Sbjct: 204 AFLAKHTVVADDIEVTASGDINDLNSIRAFSVAYLRHEQDLDLKAFQIKFDVFSLESALY 263 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 + + L + G+ YE L ++T GDD DR + K Sbjct: 264 T--TGKVEQTVQALIKSGHTYE----------------QDDALWLKTTDFGDDKDRVMRK 305 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVL 384 +DG YTYF D+AY K+ RGF +I G+DH + R+ A A + + + + Sbjct: 306 TDGGYTYFVPDVAYHTDKWNRGFVRVINEQGADHHSTITRVRAGLQAMDIGIPQGWPDYV 365 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L ++V + R G +K+SKRAG ++TLR +++EVG D+ R+ + R+ L FD + Sbjct: 366 LHQMVTVMRGGEEVKLSKRAGSYVTLRDLIEEVGCDATRYFLAARRADSQLVFDIDLARS 425 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 QS +NPV+Y+QYA+AR S+ Q L N+ P + +T+ +Q L+E Sbjct: 426 QSNDNPVYYIQYAHARICSVLSQWNGDVSSLAH----VNLNPLTTAHETALMQ---RLSE 478 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 YP ++ N+ P+ +A YL +LAS H +++ +F+ + +L + RL L+ Sbjct: 479 YPEIVANSATELAPHVVANYLKELASDLHSYYN------EYKFL-IEDEQLKLARLSLIS 531 Query: 565 AVASIINSGLNIIGVESPNEM 585 A ++ +GL+++GV + M Sbjct: 532 ATQQVLKNGLDLLGVTAKERM 552 >gi|256390399|ref|YP_003111963.1| arginyl-tRNA synthetase [Catenulispora acidiphila DSM 44928] gi|256356625|gb|ACU70122.1| arginyl-tRNA synthetase [Catenulispora acidiphila DSM 44928] Length = 556 Score = 323 bits (828), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 191/557 (34%), Positives = 305/557 (54%), Gaps = 35/557 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + +ERP++ HG +TN A+ L++ G+ P +AEL+ R++ + V +AG GF+NL Sbjct: 32 VTVERPKNRDHGDYATNVALQLTKAAGMPPRALAELLAERLREVEGIAGVDVAGPGFLNL 91 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+ ++ SIV G +YGR+ VN+EFVSANPTGP+H+GH R A VGD L Sbjct: 92 KLAAGAAGELAKSIVEQGAQYGRSETFAAQIVNLEFVSANPTGPLHLGHTRWAAVGDALG 151 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHV 209 L+ +G +VTRE+YINDAG Q+N LS+ AL N ++P +G Y G Y+K + Sbjct: 152 RLLEAAGADVTREFYINDAGNQMNNFGLSL------ALRANGEEVPSGQGLYEGAYIKDL 205 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 + + +++ L P+E + + + +++ ++ L+ D++ SE H + Sbjct: 206 AQAILEEHPV-LTQLPQEAQVEAFRTAGYKTQLRLQQESLEKFRTHFDVWFSEKTLH--E 262 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + + D LA QG+V+E + R+T GDD DR +++S+G Sbjct: 263 SGAVEGVADRLAEQGHVFE----------------QDGAVWLRTTDFGDDKDRVIVRSNG 306 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCEL 388 TYF+AD AY+ K +RG+ IY++G+DH GYV RL+A+AA + Q I VL+ + Sbjct: 307 ERTYFSADCAYYLNKRDRGYSPCIYMLGADHHGYVGRLKAMAACSGDDPEQDIEVLIGQF 366 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V++ +DG +K+SKR G+ +TL V+D +G D+ R+ + L D + Q E Sbjct: 367 VKMVKDGEEVKLSKRTGNIVTLDDVIDLIGVDAARYALARSSVDNELVLDVDLLTSQKAE 426 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 NPV+YVQYA++R S+ R A +L FD E E L+ LAE+PRV Sbjct: 427 NPVYYVQYAHSRMASVKRNA----AELGFDKGTAEDFKPELLSHPREEALLAALAEFPRV 482 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 I A ++ +++A YL D+A +HG ++ R P + L R+ L A + Sbjct: 483 IAQAAGLRKVHQVAHYLEDMAKKYHGFYTDCRILP---LGEDKPSDLNRARMWLAEATQT 539 Query: 569 IINSGLNIIGVESPNEM 585 ++ +GL+++GV +P M Sbjct: 540 VLRNGLDLLGVSAPERM 556 >gi|183984076|ref|YP_001852367.1| arginyl-tRNA synthetase ArgS [Mycobacterium marinum M] gi|238690961|sp|B2HR81|SYR_MYCMM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|183177402|gb|ACC42512.1| arginyl-tRNA synthetase ArgS [Mycobacterium marinum M] Length = 550 Score = 323 bits (827), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 200/591 (33%), Positives = 305/591 (51%), Gaps = 54/591 (9%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LK+ + + ++ L + +V+ERPR+ HG ++N A+ L++ +G +P Sbjct: 4 ADLAELLKSTATAVLSEHALDTSALPQTVVVERPRNPEHGDYASNVALQLAKKVGANPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A I + + S +AG GFINL L S KI+++I+ +G +G + + KV Sbjct: 64 LAGWIAEALTKADGIASAEVAGPGFINLRLETSAQAKIVNAIIDAGSGFGHSELMAAHKV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L++ G +V REYY ND GAQI+ A S+ Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGADVVREYYFNDHGAQIDRFANSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + P+ Y G Y+ + + K + + L+ P+ + ++ V M Sbjct: 184 AAK------GEPTPDDGYAGTYINDIAARVLQK-APDALSLPDAQMHETFREIGVDLMFS 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I++ L D++ ED H + + L G +YE K T Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMH--STGRVDQAVARLRETGNIYE------KDGAT---- 284 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 RS+ GDD DR ++KSDG Y A DLAY+ K ERGFD IY++G+DH GY Sbjct: 285 ------WLRSSSFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRERGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA E A + VL+ ++V L RDG P++MSKRAG ITL +V+ +G D+ R Sbjct: 339 IARLKAAAAAFGEDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D S ENPV+YVQYA+AR ++ R A ++ Sbjct: 399 YSLIRSSVDTPIDIDLALWSSASNENPVYYVQYAHARLSALARNAAEL-----------G 447 Query: 484 VIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 +IP DT L+L+ H L ++PR+++ A +EP+++ YL DLA +H Sbjct: 448 LIP-----DTDHLELLSHEKEGVLLRTLGDFPRMLKTAASLREPHRVCRYLEDLAGDYHR 502 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R P+ +L RL L A +I +GL I+GV +P M Sbjct: 503 FYDSCRVLPQ---GDEEPTQLHTARLALCQATRQVIANGLGILGVTAPERM 550 >gi|258646587|ref|ZP_05734056.1| arginine--tRNA ligase [Dialister invisus DSM 15470] gi|260404001|gb|EEW97548.1| arginine--tRNA ligase [Dialister invisus DSM 15470] Length = 554 Score = 323 bits (827), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 195/555 (35%), Positives = 294/555 (52%), Gaps = 38/555 (6%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +E P+ G STNAAM +R +P IAE IV I P V + IAG GFIN +L Sbjct: 35 LEIPKAKEFGDYSTNAAMQWARTAHKEPRAIAESIVKYIDA-PLVSKMEIAGAGFINFFL 93 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + + L +I+ +G YG K K+ +E+VSANPTGP+H+GH R A G L +L Sbjct: 94 AADTVYAELRNILSAGASYGDLPKDKKDKILVEYVSANPTGPLHIGHARGAAYGSALVNL 153 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + +GY+V EYY+NDAG+QI LA SV RY Q L D+D+PE Y G + K L Sbjct: 154 LRAAGYDVYAEYYVNDAGSQIAHLAESVNARYLQ-LLGKDADVPEDGYHGYDIVETAKSL 212 Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273 D+ L+ EE L + K ++ + I++ DL ++ D + SE + P + Sbjct: 213 IDREGDAYLSMDEEARLKVFKTVALNEKLSILKKDLADFHVTFDNWFSEKSLY---PKQV 269 Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333 D + L + GY+YE +T GDD DR +++++G TY Sbjct: 270 DDALAALKKDGYLYE----------------KDGAWWLATTKNGDDKDRVVIRANGEPTY 313 Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393 F +D+AY K +RG++ +I + G+DH GY+ R+ + + ++L ++V L R Sbjct: 314 FCSDIAYVPNKEKRGYNKLIDIWGADHHGYIIRIHSAMKFLGYDPEDFEIMLLQMVTLLR 373 Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453 DG P+KMSKR G +TLR ++DEVGSD+ R+ R +DFD K+QS +NPV+Y Sbjct: 374 DGQPVKMSKRTGQAVTLRELMDEVGSDAARYFFCSRTLDSQMDFDIDLAKKQSSDNPVYY 433 Query: 454 VQYAYARCRSIFRQAKDI---FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 +QYA AR S+F QAK+ + D + F + + +E E D L+ + Y +I+ Sbjct: 434 IQYANARIHSLFAQAKEAGVKWGDWEKTDFTK--LTEECELD-----LVKKMENYHMLID 486 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A + P ++A Y Y+LA +FH + R + +T RL L+ AV ++ Sbjct: 487 GAAKERAPQRIAKYAYELAGLFHHFYRECR-------ILGVEEGVTQARLGLITAVQHVL 539 Query: 571 NSGLNIIGVESPNEM 585 L+I+GV +P M Sbjct: 540 VHALSILGVSAPERM 554 >gi|254821291|ref|ZP_05226292.1| arginyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950] Length = 550 Score = 322 bits (826), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 196/582 (33%), Positives = 298/582 (51%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LKN + + ++ +L V +ERPR+ HG ++N AM L + +G +P Sbjct: 4 ADLAELLKNTAAAVLAERGLDAAMLPATVTVERPRNPEHGDYASNLAMQLGKKVGANPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + V S +AG GFINL L S ++++++ G YG + G + Sbjct: 64 LAGWLAEALAQADGVASAEVAGPGFINLRLEASAQAVVVNNVIDGGARYGHSDALAGHHI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L++ G V REYY ND GAQI+ A S+ Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGAVVVREYYFNDHGAQIDRFASSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + ++ K + + L+ P + + V M Sbjct: 184 AAK------GEPTPEDGYAGAYINDIAAQIVQK-APDALSLPAPEMHETFRAIGVDLMFT 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I++ L D++ ED H + + + L G +YE K T Sbjct: 237 HIKESLHEFGTDFDVYTHEDAMHT--SGRVDEALAKLRETGNIYE------KDGAT---- 284 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 R++ GDD DR ++KSDG Y A D+AY+ K +RGFD IY++G+DH GY Sbjct: 285 ------WLRASAFGDDKDRVVIKSDGKPAYIAGDIAYYLDKRQRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+AVAAA+ E A + VL+ ++V L RDG P++MSKRAG +TL +V+ +G D+ R Sbjct: 339 IARLKAVAAALGEDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D S ENPV+YVQYA+AR ++ R A ++ L D Sbjct: 399 YSLIRSSVDTPIDIDLALWSSASNENPVYYVQYAHARLSALARNAAEL--GLIADTGNLG 456 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ + E L+ L E+PRV+ A+ +EP+++ YL DLA +H + R P Sbjct: 457 LLDHDKEG-----TLLRTLGEFPRVLTTASSLREPHRICRYLEDLAGDYHRFYDSCRVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L RL L A +I +GL I+GV +P M Sbjct: 512 Q---GDEQPTDLHTARLALCQATRQVIANGLAILGVTAPERM 550 >gi|294625197|ref|ZP_06703839.1| arginyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600516|gb|EFF44611.1| arginyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 569 Score = 322 bits (826), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 195/560 (34%), Positives = 302/560 (53%), Gaps = 36/560 (6%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 V+ERP+ HG +TNAAM+L++ +P +A+ ++A + DV V IAG GFIN + Sbjct: 39 VVERPKTREHGDFATNAAMLLAKAARSNPRALAQALLAALPASDDVAKVEIAGPGFINFH 98 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L+P+ ++ ++ ++ G +YGR L G G V +E+VSANPTGP+HVGH R A +GD+LA Sbjct: 99 LAPTAYQREVAHVIKQGHDYGRGLAGNGRSVGVEYVSANPTGPLHVGHGRAAAIGDSLAR 158 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211 ++ +G+ V RE+Y NDAG QI LALSV R Q L + + PE Y G Y+ V Sbjct: 159 VLDANGWNVKREFYYNDAGVQIENLALSVQAR-AQGLTPDSAGWPENGYRGDYIADVANA 217 Query: 212 ----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 + D + + L ++ ++V + DL A + DI+ E ++ Sbjct: 218 YLAGDTVDLEGHLVTGTKDPADLEAIRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK 277 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 + + + L G+ YE + L +ST GDD DR + KS Sbjct: 278 --DGKVEEAVQKLIASGHTYE----------------EGGALWLKSTDFGDDKDRVMRKS 319 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLL 385 DG+YTYF D+AY K++RG++ I +G+DH G + R+ A A + + +L Sbjct: 320 DGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLTRVRAGLQAMELGIPQGWPEYVL 379 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 ++V + R G +K+SKRAG ++TLR +++E +D+VR+ ++ RK L FD + Q Sbjct: 380 HQMVTVMRGGEEVKLSKRAGSYVTLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARAQ 439 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 S +NPVFYVQYA+AR S+ RQA++ D + D L +++ L+ Y Sbjct: 440 SNDNPVFYVQYAHARVCSVLRQAQEKGYKYD---QAHGLAELACLDDEHSLAVMLELSRY 496 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 P V+E A A EPY++A YL +LA FH W H N ++ A R +L L A Sbjct: 497 PEVVEIAGQALEPYQIAQYLRELAHAFH-TWYH---NSKVLVDAAAERD---AKLTLAVA 549 Query: 566 VASIINSGLNIIGVESPNEM 585 ++ +GL ++GV +P +M Sbjct: 550 TQQVLANGLELLGVSAPEKM 569 >gi|326332896|ref|ZP_08199153.1| arginine--tRNA ligase [Nocardioidaceae bacterium Broad-1] gi|325949254|gb|EGD41337.1| arginine--tRNA ligase [Nocardioidaceae bacterium Broad-1] Length = 554 Score = 322 bits (826), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 188/566 (33%), Positives = 293/566 (51%), Gaps = 36/566 (6%) Query: 22 IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSV 81 I + + + +ERPR HG +TN A+ L++ G +P + E I A++K V V Sbjct: 23 ITLPDGVPSTVTVERPRQKGHGDYATNVALQLAKKAGTNPRQLGEQIAAKLKESDGVADV 82 Query: 82 FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 IAG GF+N+ + K+ IV +G YG N KG +N+EFVSANPTGP+H+G Sbjct: 83 EIAGPGFLNISVEAGAQGKLAGEIVAAGKAYGNNDSFKGHNINLEFVSANPTGPLHLGGV 142 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYY 201 R A VGD L ++ SG EVTREYY ND G QI+ A S+ + +PE Y Sbjct: 143 RWAAVGDALGRVLEASGAEVTREYYFNDHGGQIDRFARSLL------AWAQGKPVPEDGY 196 Query: 202 PGVYLKHVGKELADKYSSEL-LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 G Y++ + K++ K + L + P+E + + V+ M I+ L N+ D++ Sbjct: 197 GGAYIEEIAKQVLAKEPNALEADDPQE----VFRAIGVELMFAEIKKSLHDFNVDFDVYF 252 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 ED+ H+ + I+ L G VYE + + GDD Sbjct: 253 HEDNLHK--SGAVERAIEKLRELGNVYE----------------KDGAIWLATEKFGDDK 294 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR ++K+DG+ YF+ DLAY+ K ERGFD ++G+DH GYV R+ A+ AA + + Sbjct: 295 DRVVIKADGNGAYFSGDLAYYLDKRERGFDRCFIMLGADHHGYVGRMMAMCAAFGDTPHE 354 Query: 381 -INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439 + +L+ ++V L +DG P++MSKRAG +T+ +V+ +G D+ R+ + + +D D Sbjct: 355 NLEILIGQMVNLLKDGQPMRMSKRAGTVVTIDDIVEAIGVDAARYALARYSSDSNIDIDL 414 Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 + NPV+YVQY +AR + A D+ +D D F +++ E +L+ Sbjct: 415 DLWAKADSANPVYYVQYVHARTCRMMANAADLGMAIDLDTFDPSLLTH-----AREGELL 469 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 LAE PRV+ A +EP+++A YL D A +FH W + L + + R Sbjct: 470 RALAELPRVVATAAELREPHRVARYLEDTAGIFH-RWYDDDDCRMLPKGDEPVAPVNLAR 528 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L LV A ++ +GL ++GV +P M Sbjct: 529 LALVSAARTVFANGLGLLGVSAPERM 554 >gi|289666332|ref|ZP_06487913.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 562 Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 195/561 (34%), Positives = 305/561 (54%), Gaps = 38/561 (6%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 V+ERP+ HG +TNAAM+L++ +P +A+ ++A + DV V IAG GFIN + Sbjct: 32 VVERPKTREHGDFATNAAMLLAKAARSNPRVLAQALLAALPASDDVAKVDIAGPGFINFH 91 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L+P+ ++ ++ ++ G +YGR L G G V +E+VSANPTGP+HVGH R A +GD+LA Sbjct: 92 LAPTAYQREVAHVIKQGHDYGRGLAGNGRSVGVEYVSANPTGPLHVGHGRAAAIGDSLAR 151 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211 ++ +G+ V RE+Y NDAG QI LALSV R Q L + + PE Y G Y+ V Sbjct: 152 VLDANGWNVKREFYYNDAGVQIENLALSVQAR-AQGLTPDSAGWPENGYRGDYIADVANA 210 Query: 212 ----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 + D + + L ++ ++V + DL A + DI+ E ++ Sbjct: 211 YLAGDTVDLEGHLVTGTKDPADLESIRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK 270 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 + + + L G+ YE + L +ST GDD DR + KS Sbjct: 271 --DGKVEEAVQQLIASGHTYE----------------EGGALWLKSTDFGDDKDRVMRKS 312 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLL 385 DG+YTYF D+AY K++RG++ I +G+DH G + R+ A A + + +L Sbjct: 313 DGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLTRVRAGLQAMELGIPQGWPEYVL 372 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 ++V + R G +K+SKRAG ++TLR +++E +D+VR+ ++ RK L FD + Q Sbjct: 373 HQMVTVMRGGEEVKLSKRAGSYVTLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARAQ 432 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE-LQLIVHLAE 504 S +NPVFYVQYA+AR S+ RQA++ D + + + + D L +++ L+ Sbjct: 433 SNDNPVFYVQYAHARVCSVLRQAQEKGYKYD----QTHGLAELAHLDDEHSLAVMLELSR 488 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 YP V+E A A EPY++A YL +LA FH W H N ++ A R +L L Sbjct: 489 YPEVVEIAGQALEPYQIAQYLRELAHAFH-TWYH---NSKVLVDDAAERD---AKLTLAV 541 Query: 565 AVASIINSGLNIIGVESPNEM 585 A ++ +GL ++GV +P +M Sbjct: 542 ATQQVLANGLELLGVSAPEKM 562 >gi|261856695|ref|YP_003263978.1| arginyl-tRNA synthetase [Halothiobacillus neapolitanus c2] gi|261837164|gb|ACX96931.1| arginyl-tRNA synthetase [Halothiobacillus neapolitanus c2] Length = 588 Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 189/608 (31%), Positives = 317/608 (52%), Gaps = 74/608 (12%) Query: 20 CKIKVEKKILDRIV-----IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI 74 ++ E+ ++D + + P+D +HG +TN A+ +++P+G+ P A+ ++ + Sbjct: 13 VRLMQEQGVMDAAINVTPALTVPKDPSHGDFATNIALQIAKPMGVPPRVAAQCLLEALTD 72 Query: 75 DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG 134 + + IAG GF+N ++ P+ ++ +I+ +G +G + G+G KV +EFVSANPTG Sbjct: 73 REGIKQIEIAGPGFLNFFVDPAAAFALIDTILAAGGTFGHSRFGEGKKVQVEFVSANPTG 132 Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS 194 P+HVGH R A G +A L+A G++V REYY+NDAG Q++ LA+S++ RY +A + Sbjct: 133 PLHVGHGRGAAYGAVVADLLAAVGFDVYREYYVNDAGRQMHILAVSIWLRYLEACGAKLT 192 Query: 195 DLPEGYYPGVYLKHVGKELADKYSSELL--------NFPE-------------------- 226 GY Y+ + K L ++ + N P Sbjct: 193 FPANGYKSEAYIFDIAKALKTEHGDTMFVSTEDVFTNLPPDEPQGGDKDVYIDTLIERAK 252 Query: 227 ----EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282 E V D + +++ IRDDL+ ++++ + SE D I I L Sbjct: 253 TLLGETRYRTVFDAGLNSILADIRDDLREFGVEYEQWYSEQTLE--DRGLIDRAIAKLEE 310 Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342 +G +YE L F+ST GDD DR + + +G TYFA+D+AY Sbjct: 311 RGQIYE----------------KEGALWFKSTEFGDDKDRVVRRDNGQSTYFASDIAYHM 354 Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402 K+ERGFD +I + G+DH GYV R++A A+ +++++V L + LYR G ++MS Sbjct: 355 EKFERGFDRVIDIWGADHHGYVPRVKAALTALGFDESRLDVSLVQFAILYRGGERVQMST 414 Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462 R+G F+TLR + EVG+++ RF + R ++ LDFD K QS +NP++Y+QYA+AR Sbjct: 415 RSGSFVTLRELRQEVGNEAARFFYVMRAAAQHLDFDLDLAKSQSNDNPLYYIQYAHARVC 474 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEP 518 S+FRQ L F + S + ++ E L L+++ ++ A + EP Sbjct: 475 SVFRQ-------LPLRGFTHDAENGRSAYARLTESHEQALFKRLSQFGDTVQRAAVNLEP 527 Query: 519 YKLAFYLYDLASVFHGHW-SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 + + YL +LA FH ++ +H F+ A++ L RL L+ A ++ +GL ++ Sbjct: 528 HLIVHYLRELAQDFHAYYNAHA-------FLVADDAPLRDARLNLIAATRQVLANGLALL 580 Query: 578 GVESPNEM 585 G+ +P EM Sbjct: 581 GMSAPEEM 588 >gi|153872908|ref|ZP_02001666.1| Arginyl-tRNA synthetase, class Ic [Beggiatoa sp. PS] gi|152070626|gb|EDN68334.1| Arginyl-tRNA synthetase, class Ic [Beggiatoa sp. PS] Length = 585 Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 202/614 (32%), Positives = 316/614 (51%), Gaps = 76/614 (12%) Query: 11 LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 L L ++ K + K I +I +ER RD HG + N AM L++ L + P +A IV Sbjct: 9 LTQALTQLQSKGDIPKDIEPQIHLERTRDNQHGDFACNVAMALAKILKMRPRDLATQIVE 68 Query: 71 RI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129 ++ K D + + IAG GFIN++LS ++ I+ + YG++ +G G V IEFVS Sbjct: 69 QLPKDDELIAKIEIAGPGFINVFLSQKAYDTVIEDILTAKETYGQSQVGAGQSVMIEFVS 128 Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189 ANPTGP+HVGH R A G LA+L+ +G++V +EYY+NDAG Q++ LA+SV+ RY + L Sbjct: 129 ANPTGPLHVGHGRGAAYGAALANLLTVAGFKVHKEYYVNDAGRQMDILAISVWLRYLE-L 187 Query: 190 YNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELL--NFP---------------- 225 P Y G Y+ + L A + S+++ N P Sbjct: 188 CGETITFPSNGYQGDYVWDIAASLHRERGDALRQDSKIVFDNVPPDINQGGDKELHVDAL 247 Query: 226 --------EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277 E+ I+ + ++ IRDDL+ + +D + SE + + I Sbjct: 248 IDRSKQLLGEESYHIIFQRGLGIILAEIRDDLEQFGVVYDEWFSESNL--TTTHTVARAI 305 Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337 + L G++YE L FRS+ GD+ DR +++ +G +TYF++D Sbjct: 306 EQLKATGHIYE----------------QDGALWFRSSAFGDEKDRVVVRENGQFTYFSSD 349 Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397 +AY K ERGFD +I + G+DH GYV R++A A+ ++ VLL + LYR Sbjct: 350 IAYHLNKLERGFDYLINIWGADHHGYVSRVKAAMTALGADAQRLTVLLVQFASLYRGKER 409 Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457 ++MS R+G+F TLR + EVG D+ RF + RK+ + L+FD K Q +NPV+YVQYA Sbjct: 410 LQMSTRSGEFATLRELRSEVGRDAARFFYIQRKSEQHLNFDLELAKSQKNDNPVYYVQYA 469 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ------LIVHLAEYPRVIEN 511 + R +FR+ +D +N++ ++ S+L L+V L+ Y +IE Sbjct: 470 HTRIAGVFRELRD-----------KNLVWHHNKALLSKLTQAHERALLVMLSRYSEMIEA 518 Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571 A + EP++L +YL DLA FH + + + ++ L RL L A +++ Sbjct: 519 AAHSYEPHQLTYYLRDLAQQFHTCYDSHK-------ILIDDEDLRNARLSLSAACQQVLH 571 Query: 572 SGLNIIGVESPNEM 585 +GL II V +P M Sbjct: 572 NGLTIISVSAPEVM 585 >gi|226360614|ref|YP_002778392.1| arginyl-tRNA synthetase [Rhodococcus opacus B4] gi|254782979|sp|C1AW17|SYR_RHOOB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|226239099|dbj|BAH49447.1| arginyl-tRNA synthetase [Rhodococcus opacus B4] Length = 550 Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 191/587 (32%), Positives = 305/587 (51%), Gaps = 46/587 (7%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + L+ ++ + ++ +L + + +ERPR+ HG +TN AM +++ +G +P Sbjct: 4 ADLAELLRGTAAKVLAERGLDVSVLPETLTVERPRNPEHGDYATNVAMQVAKKVGTNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + +DS IAG GF+N+ L+ I++ I+ +G +G G K+ Sbjct: 64 LAGWLADALTAAEGIDSADIAGPGFLNIRLAADAQGAIVAKILEAGAAFGAGHTLDGKKI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L +++ G VTREYY ND GAQI+ + S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRILSTQGAAVTREYYFNDHGAQIDRFSRSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + ++ + ++L+ P + + + V M Sbjct: 184 AAK------GEPAPEDGYAGAYIADIAAQV-QQQRPDVLDLPAGEQQEVFRSIGVDLMFA 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L + D++ E+ + + ++ L G +++ Sbjct: 237 HIKRTLHEFGVDFDVYFHENSLF--ESGAVEKAVETLKDSGNLFQ--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 + +ST GDD DR ++KSDG+ Y A D+AYF+ K RGFD IY++G+DH GY Sbjct: 280 -EDGAWWLKSTDFGDDKDRVVIKSDGNAAYIAGDIAYFQDKRSRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA + + VL+ ++V L RDG+ +KMSKRAG ITL +V+ +G D+ R Sbjct: 339 IGRLKAAAAAFGDDPDTVEVLIGQMVNLVRDGVAVKMSKRAGTVITLDDLVEAIGVDASR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLF 480 + M+ +D D ENPV+YVQYA+AR +I R A D+ D DF L Sbjct: 399 YAMIRSSVDSSIDIDLELWTSTGNENPVYYVQYAHARLSAIARNAADLGIAVTDPDFSLL 458 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 + QE + LI L EYPRV+ +A +EP+++A YL +LA +H + R Sbjct: 459 ---IAEQEGD-------LIRTLGEYPRVVTSAANLREPHRIARYLEELAGAYHRFYGACR 508 Query: 541 ENPRLRFVQANNR--KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P Q + L + RL L A ++ +GL ++GV +P +M Sbjct: 509 ILP-----QGDEEVGPLHIARLALCDASRQVLANGLALLGVSAPEQM 550 >gi|238018516|ref|ZP_04598942.1| hypothetical protein VEIDISOL_00343 [Veillonella dispar ATCC 17748] gi|237864987|gb|EEP66277.1| hypothetical protein VEIDISOL_00343 [Veillonella dispar ATCC 17748] Length = 577 Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 200/580 (34%), Positives = 306/580 (52%), Gaps = 60/580 (10%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 IV+E P G STN AM +R +P IAE +++ + D ++ +AG GFIN Sbjct: 32 IVLEVPPQKEFGDFSTNIAMQSARVARQNPRAIAEALISHMNFDW-LERAEVAGAGFINF 90 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +L + L +I+ +G +YG + + +E+VSANPTGP+HVGH R A G L Sbjct: 91 FLKSDMVYDTLKAILNAGDQYGVQPLRARDTIQVEYVSANPTGPLHVGHGRGAAYGSALV 150 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ---------ALYNNDS-----DLP 197 +L+ +GY V EYYINDAG QI+ +A+S+ +R+Q+ N D D+P Sbjct: 151 NLLRAAGYNVQSEYYINDAGNQIDNMAISIEYRFQELQGATLVFPPKRNEDGSMPEFDIP 210 Query: 198 EGY-------YPGVYLKHVGKELADKYSSELLN-FPEEKWLPIVKDYSVQAMMKIIRDDL 249 EG Y G + K +A++ + LN E + + K+ ++ + + + L Sbjct: 211 EGALVFPENGYRGPDIIETAKTIAEREGFDKLNAMNEADRVALFKEEGLKEKLARLEETL 270 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 + D + SE H D I ++ L G VYE L Sbjct: 271 SNFRVTFDNWFSERTVHEADE--IHHSVEALKALGKVYE----------------KDGAL 312 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369 +ST GDD DR +++ +G TY AAD+AY + KY+RGF MI + G+DH GYV R++A Sbjct: 313 WLKSTDYGDDKDRVVIRDNGVPTYLAADIAYHRNKYDRGFKEMIDIWGADHHGYVCRVKA 372 Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429 AA ++ VLL ++V L+RDG +K+SKR+GD +TL +++EVG D+ R+ L R Sbjct: 373 AMAAFGYDPDKLTVLLLQMVALFRDGQLVKLSKRSGDSVTLDELIEEVGVDASRYFFLMR 432 Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489 LDFD K +S +NPV+Y+QYA+AR SI+ Q ++ + F + E+ Sbjct: 433 SLDSQLDFDINLAKSRSNDNPVYYIQYAHARIHSIYNQVRE--AGIAFGDY------SET 484 Query: 490 EFDT----SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 +F T EL+LI LAEYP + + P+++A YL+DLAS+FH + GR Sbjct: 485 DFTTLTSEMELELIKKLAEYPEEVVQSAEHHAPHRIARYLFDLASMFHSFYRQGR----- 539 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + L RL L+ A+A ++ GL I+G+ +P +M Sbjct: 540 --IIGVDPALQQARLGLITAIALVLRQGLGILGISAPEKM 577 >gi|308066957|ref|YP_003868562.1| arginyl-tRNA synthetase [Paenibacillus polymyxa E681] gi|305856236|gb|ADM68024.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) [Paenibacillus polymyxa E681] Length = 506 Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 191/540 (35%), Positives = 293/540 (54%), Gaps = 39/540 (7%) Query: 51 MILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSG 109 M L+R +P IAE ++A + + ++S IAG GFIN L+ SYL ++ + G Sbjct: 1 MQLTRIAKKNPRQIAEDLIANMDLASASIESAEIAGPGFINFRLNKSYLYAVIGQVQEQG 60 Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169 +YGR G G KV IEFVSANPTG +H+GH R A VGD L +++ F+GY+VTREYYIND Sbjct: 61 ADYGRIQEGAGKKVQIEFVSANPTGSLHLGHARGAAVGDALCNVLDFAGYKVTREYYIND 120 Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229 AG QI ++ S+ RY Q L +++PE Y G + KEL + LL+ Sbjct: 121 AGNQIYNMSRSIEARYLQEL-GQPAEMPEDGYHGEDIIGFAKELVAEKGDSLLSMEPGDR 179 Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 +DY ++ + I+ DL+ + D + SE + + + ++ L + +YE Sbjct: 180 AAYFRDYGLEKELNKIKRDLELFRVPFDSWFSETSLY--ENGEVLKALNELRDREEIYE- 236 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349 K T +T GDD DR L+K+DG+YTY D+AY + KY RG+ Sbjct: 237 -----KDGAT----------WLNTTKYGDDKDRVLIKNDGTYTYLTPDIAYHRDKYARGY 281 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 D +I + G+DH GY+ R++A A+ ++ VL+ ++V L+++G +KMSKR G +T Sbjct: 282 DTIINIWGADHHGYIPRMKAAMEALGNDPDKLKVLIAQMVSLFQNGEKVKMSKRTGKAVT 341 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 + +++EVG D++R+ R LDFD S ENPVFYVQYA+AR S++RQA+ Sbjct: 342 MEDLMEEVGVDAIRYFFTMRSMDSHLDFDMDLAISTSNENPVFYVQYAHARACSVYRQAE 401 Query: 470 D----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 + + P + DL + + E E+D L+ + E P + A P+++ Y+ Sbjct: 402 EQGIAVLPLAEVDL---SKLTAEHEYD-----LLRKIGELPEEVSVAAANFAPHRMIRYV 453 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 Y+LAS+FH ++ R V + T RL L AV + I + L ++GV +P M Sbjct: 454 YELASLFHSYYKAER-------VITEDAAQTQARLALFGAVRTTIANVLKLVGVSAPERM 506 >gi|167561324|ref|ZP_02354240.1| arginyl-tRNA synthetase [Burkholderia oklahomensis EO147] gi|167568554|ref|ZP_02361428.1| arginyl-tRNA synthetase [Burkholderia oklahomensis C6786] Length = 594 Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 204/611 (33%), Positives = 317/611 (51%), Gaps = 65/611 (10%) Query: 11 LKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 L+N +K++ K + +L I +ERP+ AHG ++ N A+ L++PLG +P +AE Sbjct: 13 LENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQLAER 72 Query: 68 IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 IVA + P+ VD+ IAG GFINL L+P+ + ++ ++ G +G + G +V Sbjct: 73 IVAALTAQPEAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVFAEGRAFGASSRDHGKRV 132 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA+S Sbjct: 133 LLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAISTQA 192 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPIVKDYS 237 R + L D+ PE Y G Y+ + G+ +A + + + L ++ ++ Sbjct: 193 R-ARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGQPVTGKRDVEDLEAIRKFA 251 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 V + + DLKA ++ D + E + + +D L G YE Sbjct: 252 VTYLRREQDMDLKAFGVKFDQYYLESSLY--TEGRVEKTVDALIEAGMTYE--------- 300 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 L R+T GDD DR + K+DG+YTYF D+AY K+ERGF +I + G Sbjct: 301 -------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVINIQG 353 Query: 358 SDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV- 414 SDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+R ++ Sbjct: 354 SDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVRDLIE 413 Query: 415 ----------------DEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454 DE G D+VRF ++ RK FD +Q+ ENPV+YV Sbjct: 414 WSGGATPGSEASPDLLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYV 473 Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514 QYA+AR S+ + K + D ++ P +S+ + L+ LAEYP V+ +A Sbjct: 474 QYAHARICSVLNEWKSRYGATDALFANADLSPLDSK---QAMALMQKLAEYPDVLAHAAS 530 Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 P+ +AFYL DLAS FH ++ R V + L R+ L+ A ++ +GL Sbjct: 531 ELAPHAVAFYLRDLASEFHSFYNAER-------VLVDEEALRTARVALLAATRQVLENGL 583 Query: 575 NIIGVESPNEM 585 ++GV +P++M Sbjct: 584 AMLGVSAPSKM 594 >gi|238060801|ref|ZP_04605510.1| arginyl-tRNA synthetase [Micromonospora sp. ATCC 39149] gi|237882612|gb|EEP71440.1| arginyl-tRNA synthetase [Micromonospora sp. ATCC 39149] Length = 554 Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 191/557 (34%), Positives = 298/557 (53%), Gaps = 35/557 (6%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 R +ERPR+ HG ++ A+ LS+ +G+ P +A + ++ + SV IAG GF+N Sbjct: 31 RTTVERPRNPEHGDYASTLALQLSKKVGVPPRELATALAEQLGRAAGIKSVEIAGPGFLN 90 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + L + ++ SIV +G YGR+ G K+N+EFVSANPTGP+H+G R A VGD L Sbjct: 91 IRLDAAAAGQLARSIVEAGPAYGRSTALAGQKINLEFVSANPTGPVHIGGVRWAAVGDAL 150 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + L+ +G +V EYY NDAG+QI+ A S+ PE Y G Y+ + Sbjct: 151 SRLLRATGADVGTEYYFNDAGSQIDRFARSLL------AAAKGEPAPEDGYGGAYIAEIA 204 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 E+ + ++L ++ + + V M I+ L+ ++ D + +E D H D Sbjct: 205 TEVRTR-RPDVLELADDAAQEVFRVEGVALMFSEIKSSLRDFGVEFDTYFNEKDLH--DR 261 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + + L QG+V+ D D L R+T GDD DR L KS+G Sbjct: 262 GELDQALARLREQGHVF---------------DTDGATWL-RTTDFGDDKDRVLRKSNGE 305 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCELV 389 +TYFAAD AY+ K ERGFD ++ ++G+DH GY+ R++A+AA + A + +L+ +LV Sbjct: 306 WTYFAADCAYYLDKRERGFDRVVIMLGADHHGYIGRMKAMAACFGDDPAVTLEILIGQLV 365 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 L RDG P++MSKRAG +TL +VD +G D+ R+ + + +D D +++N Sbjct: 366 NLLRDGQPVRMSKRAGTVVTLEDLVDAIGVDASRYALARYSSDSPIDIDVELWTRATRDN 425 Query: 450 PVFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 PV+YVQY AR S+ R A ++ D + F ++ + E D L+ LAE+P V Sbjct: 426 PVYYVQYVAARTASVGRNAAEVGLIRGDAEAFRPELLAHDKEND-----LLKALAEFPAV 480 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 + A +EP+++A YL +LA +H + + R PR L RL L A + Sbjct: 481 VATAAELREPHRVARYLEELAGAYHRFYDNCRILPR---GDEEVTDLHRARLWLNDATRT 537 Query: 569 IINSGLNIIGVESPNEM 585 +I +GL ++GV +P M Sbjct: 538 VIANGLCLLGVSAPERM 554 >gi|109940178|sp|Q8PFR2|SYR_XANAC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS Length = 562 Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 195/560 (34%), Positives = 301/560 (53%), Gaps = 36/560 (6%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 V+ERP+ HG +TNAAM+L++ +P +A+ ++A + DV V IAG GFIN + Sbjct: 32 VVERPKTREHGDFATNAAMLLAKAARSNPRALAQALLAALPASDDVAKVEIAGPGFINFH 91 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L+P+ ++ ++ ++ G +YGR L G G V +E+VSANPTGP+HVGH R A +GD+LA Sbjct: 92 LAPTAYQREVAHVIKQGHDYGRGLAGNGRSVGVEYVSANPTGPLHVGHGRAAAIGDSLAR 151 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211 ++ +G+ V RE+Y NDAG QI LALSV R Q L + PE Y G Y+ V Sbjct: 152 VLDANGWNVKREFYYNDAGVQIENLALSVQAR-AQGLTPDSDGWPENGYRGDYIADVANA 210 Query: 212 ----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 + D + + L ++ ++V + DL A + DI+ E ++ Sbjct: 211 YLAGDTVDLEGHLVTGTKDPADLESIRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK 270 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 + + + L G+ YE + L +ST GDD DR + KS Sbjct: 271 --DGKVEEAVQKLIASGHTYE----------------EGGALWLKSTDFGDDKDRVMRKS 312 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLL 385 DG+YTYF D+AY K++RG++ I +G+DH G + R+ A A + + +L Sbjct: 313 DGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLTRVRAGLQAMELGIPQGWPEYVL 372 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 ++V + R G +K+SKRAG ++TLR +++E +D+VR+ ++ RK L FD + Q Sbjct: 373 HQMVTVMRGGEEVKLSKRAGSYVTLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARAQ 432 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 S +NPVFYVQYA+AR S+ RQA++ D + D L +++ L+ Y Sbjct: 433 SNDNPVFYVQYAHARVCSVLRQAQEKGYKYD---QAHGLAELACLDDEHSLAVMLELSRY 489 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 P V+E A A EPY++A YL +LA FH W H N ++ A R +L L A Sbjct: 490 PEVVEIAGQALEPYQIAQYLRELAHAFH-TWYH---NSKVLVDAAAERD---AKLTLAVA 542 Query: 566 VASIINSGLNIIGVESPNEM 585 ++ +GL ++GV +P +M Sbjct: 543 TQQVLANGLELLGVSAPEKM 562 >gi|78049585|ref|YP_365760.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78038015|emb|CAJ25760.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 569 Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 196/560 (35%), Positives = 301/560 (53%), Gaps = 36/560 (6%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 V+ERP+ HG +TNAAM+L++ +P +A+ +VA + DV V IAG GFIN + Sbjct: 39 VVERPKTREHGDFATNAAMLLAKAARSNPRALAQALVAALPASDDVAKVDIAGPGFINFH 98 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L+P+ ++ ++ ++ G +YGR L G G V +E+VSANPTGP+HVGH R A +GD+LA Sbjct: 99 LAPTAYQRQVAHVIKQGHDYGRGLAGNGRSVGVEYVSANPTGPLHVGHGRAAAIGDSLAR 158 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211 ++ +G+ V RE+Y NDAG QI LALSV R Q L + PE Y G Y+ V Sbjct: 159 VLDANGWNVKREFYYNDAGVQIENLALSVQAR-AQGLTPDSDGWPENGYRGDYIADVASA 217 Query: 212 ----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 + D + + L ++ ++V + DL A + DI+ E ++ Sbjct: 218 YLAGDTVDLEGHLVTGTKDPADLESIRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK 277 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 + + + L G+ YE + L +ST GDD DR + KS Sbjct: 278 --DGKVEEAVQKLIASGHTYE----------------EGGALWLKSTDFGDDKDRVMRKS 319 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLL 385 DG+YTYF D+AY K++RG++ I +G+DH G + R+ A A + + +L Sbjct: 320 DGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLTRVRAGLQAMELGIPQGWPEYVL 379 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 ++V + R G +K+SKRAG ++TLR +++E +D+VR+ ++ RK L FD + Q Sbjct: 380 HQMVTVMRGGEEVKLSKRAGSYVTLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARAQ 439 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 S +NPVFYVQYA+AR S+ RQA++ D + D L +++ L+ Y Sbjct: 440 SNDNPVFYVQYAHARVCSVLRQAQEKGYKYD---QAHGLAELACLDDEHSLAVMLELSRY 496 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 P V+E A A EPY++A YL +LA FH W H N ++ A R +L L A Sbjct: 497 PEVVEIAGQALEPYQIAQYLRELAHAFH-TWYH---NSKVLVDDAAERD---AKLTLAVA 549 Query: 566 VASIINSGLNIIGVESPNEM 585 ++ +GL ++GV +P +M Sbjct: 550 TQQVLANGLELLGVSAPEKM 569 >gi|21244635|ref|NP_644217.1| arginyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306] gi|21110319|gb|AAM38753.1| arginyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306] Length = 569 Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 195/560 (34%), Positives = 301/560 (53%), Gaps = 36/560 (6%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 V+ERP+ HG +TNAAM+L++ +P +A+ ++A + DV V IAG GFIN + Sbjct: 39 VVERPKTREHGDFATNAAMLLAKAARSNPRALAQALLAALPASDDVAKVEIAGPGFINFH 98 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L+P+ ++ ++ ++ G +YGR L G G V +E+VSANPTGP+HVGH R A +GD+LA Sbjct: 99 LAPTAYQREVAHVIKQGHDYGRGLAGNGRSVGVEYVSANPTGPLHVGHGRAAAIGDSLAR 158 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211 ++ +G+ V RE+Y NDAG QI LALSV R Q L + PE Y G Y+ V Sbjct: 159 VLDANGWNVKREFYYNDAGVQIENLALSVQAR-AQGLTPDSDGWPENGYRGDYIADVANA 217 Query: 212 ----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 + D + + L ++ ++V + DL A + DI+ E ++ Sbjct: 218 YLAGDTVDLEGHLVTGTKDPADLESIRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK 277 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 + + + L G+ YE + L +ST GDD DR + KS Sbjct: 278 --DGKVEEAVQKLIASGHTYE----------------EGGALWLKSTDFGDDKDRVMRKS 319 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLL 385 DG+YTYF D+AY K++RG++ I +G+DH G + R+ A A + + +L Sbjct: 320 DGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLTRVRAGLQAMELGIPQGWPEYVL 379 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 ++V + R G +K+SKRAG ++TLR +++E +D+VR+ ++ RK L FD + Q Sbjct: 380 HQMVTVMRGGEEVKLSKRAGSYVTLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARAQ 439 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 S +NPVFYVQYA+AR S+ RQA++ D + D L +++ L+ Y Sbjct: 440 SNDNPVFYVQYAHARVCSVLRQAQEKGYKYD---QAHGLAELACLDDEHSLAVMLELSRY 496 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 P V+E A A EPY++A YL +LA FH W H N ++ A R +L L A Sbjct: 497 PEVVEIAGQALEPYQIAQYLRELAHAFH-TWYH---NSKVLVDAAAERD---AKLTLAVA 549 Query: 566 VASIINSGLNIIGVESPNEM 585 ++ +GL ++GV +P +M Sbjct: 550 TQQVLANGLELLGVSAPEKM 569 >gi|218283277|ref|ZP_03489332.1| hypothetical protein EUBIFOR_01921 [Eubacterium biforme DSM 3989] gi|218215967|gb|EEC89505.1| hypothetical protein EUBIFOR_01921 [Eubacterium biforme DSM 3989] Length = 544 Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 196/554 (35%), Positives = 298/554 (53%), Gaps = 38/554 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 IV+E P++ HG S+N AM L+R L +P IA+ ++ ++ V ++ IAG GF+N Sbjct: 29 IVVETPKNKDHGDFSSNVAMQLTRQLHQNPRMIAQSLLDAFSLEM-VSNIEIAGPGFLNF 87 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 LS ++S ++ YG+ G KV++E+VSANPTG +H+GH R A GD+ A Sbjct: 88 TLSKDRFSTVISDVLAQKENYGQQ-PSNGIKVDLEYVSANPTGSLHLGHARGAAWGDSCA 146 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +M +GY+VTREYY+NDAG QI LALS+ RY+QA +++ + Y G ++ G Sbjct: 147 RIMKKAGYDVTREYYVNDAGNQITNLALSLNARYRQA-QGIPTEIGQDGYMGKDVEEKGY 205 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 ELA +Y L P E+ L + ++ + IR DL + D++ SE D Sbjct: 206 ELAKEYPETYLE-PTEENLKFFRKEGIKFELDKIRKDLDRYRVHFDVWSSEQSIR--DAG 262 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + I+ L +GYVYE L F +T GDD DR L K DGS Sbjct: 263 KVEAAINELNEKGYVYE----------------KDGALWFETTKFGDDKDRVLRKQDGSL 306 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 TY D+AY K +RGFD ++ G+DH GY+ RL+A A+ +++V + ++VRL Sbjct: 307 TYLVPDIAYHNDKCQRGFDMLVDFFGADHHGYIPRLKASMTALGNDADKLHVDIIQMVRL 366 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 +G +KMSKR G+ T+ + D+VG D+ R+ + R LDFD ++S ENPV Sbjct: 367 VSNGEEMKMSKRLGNATTINELCDKVGVDAARYFFVQRALDSHLDFDIELATKKSNENPV 426 Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511 +Y QYA+AR SI +QA+DI F E + E++L+ L E+ +VI Sbjct: 427 YYAQYAHARMCSIQKQAQDIELATSF----------EDLTNEKEIELMKSLQEFNKVIVE 476 Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571 +++ +K+ Y+ +LAS FH ++ + V +N +L+ RL LV A ++ Sbjct: 477 TAQSRQVHKMCHYIQNLASKFHSFYN------VCKVVDRDNLELSSQRLALVKATQIVLA 530 Query: 572 SGLNIIGVESPNEM 585 + L IGVE+ M Sbjct: 531 NALECIGVEAVESM 544 >gi|166713832|ref|ZP_02245039.1| arginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 562 Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 193/564 (34%), Positives = 303/564 (53%), Gaps = 44/564 (7%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 V+ERP+ HG +TNAAM+L++ +P +A+ ++ + DV V IAG GFIN + Sbjct: 32 VVERPKTREHGDFATNAAMLLAKAARSNPRALAQALLTALPASNDVTKVEIAGPGFINFH 91 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L+P+ ++ ++ ++ G +YGR L G G V +E+VSANPTGP+HVGH R A +GD+LA Sbjct: 92 LAPTAYQREVAHVIKQGHDYGRGLAGNGRSVGVEYVSANPTGPLHVGHGRAAAIGDSLAR 151 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211 ++ +G+ V RE+Y NDAG QI LALSV R Q L + + PE Y G Y+ V Sbjct: 152 VLDANGWNVKREFYYNDAGVQIENLALSVQAR-AQGLTPDSAGWPENGYRGDYIADVANA 210 Query: 212 ----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 + D + + L ++ ++V + DL A + DI+ E ++ Sbjct: 211 YLAGDTVDLEGHLVTGTKDPADLESIRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK 270 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 + + + L G+ YE + L +ST GDD DR + KS Sbjct: 271 --DGKVEEAVQKLIASGHTYE----------------EGGALWLKSTDFGDDKDRVMRKS 312 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLL 385 DG+YTYF D+AY K++RG++ I +G+DH G + R+ A A + + +L Sbjct: 313 DGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLTRVRAGLQAMELGIPQGWPEYVL 372 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 ++V + RDG +K+ KRAG ++TLR +++E +D+VR+ ++ RK L FD + Q Sbjct: 373 HQMVTVMRDGEEVKLGKRAGSYVTLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARAQ 432 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF----DTSELQLIVH 501 S +NPVFYVQYA+AR S+ RQA++ + + + +E D L +++ Sbjct: 433 SNDNPVFYVQYAHARVCSVLRQAQE-------KGYKYDQVHGLAELARLDDEHSLAVMLE 485 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 L+ YP V+E A EPY++A YL +LA FH W H N ++ A R +L Sbjct: 486 LSRYPEVVEIAGQTLEPYQIAQYLRELAHAFH-TWYH---NSKVLVDDAAERD---AKLT 538 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 L A ++ +GL ++GV +P +M Sbjct: 539 LAVATQQVLANGLELLGVSAPEKM 562 >gi|134093383|ref|YP_001098458.1| arginyl-tRNA synthetase [Herminiimonas arsenicoxydans] gi|166232794|sp|A4G1E2|SYR_HERAR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|133737286|emb|CAL60329.1| putative arginyl-tRNA synthetase (ArgS) [Herminiimonas arsenicoxydans] Length = 577 Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 206/582 (35%), Positives = 310/582 (53%), Gaps = 62/582 (10%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87 + +ERPRD +HG ++ N AM +++PL +P +A+++VA + +P ++S IAG G Sbjct: 30 VTLERPRDPSHGDVACNLAMQIAKPLKKNPREVAQVLVAALLDNPANRDLIESAEIAGPG 89 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FINL L+P+ + ++ +++ G +YG++ +G G KV IEFVSANPTGP+HVGH R +G Sbjct: 90 FINLRLTPASRQSVVKTVLQQGAQYGKSNLGAGKKVIIEFVSANPTGPLHVGHGRQGALG 149 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D ++SL GY VTRE+Y NDAG QI TLA SV R + L PE Y G Y++ Sbjct: 150 DAMSSLFDAQGYAVTREFYYNDAGVQIATLATSVQAR-ARGLKPGAEGWPESAYNGDYIQ 208 Query: 208 HVGKE-LADKYSSELLNFPEEKWLPI-----VKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 + + LA K S P I ++ ++V + + DL+A ++ D + Sbjct: 209 DIANDFLAKKTVSASDGLPVTASGDIDDIESIRAFAVAYLRREQDLDLQAFGVKFDNYYL 268 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E + + + +D L + YE +D L R+T DD D Sbjct: 269 ESSLY--NDGKVAATVDALIKADKTYE---------------LD-GALWLRTTDYRDDKD 310 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKA 379 R + KSDG+YTYF D+AY K++RGF I V GSDH G + R+ A A + + Sbjct: 311 RVMKKSDGTYTYFVPDVAYHTVKWQRGFTQAINVQGSDHHGTIARVRAGLQALDIGIPQG 370 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD--------------EVGSDSVRFM 425 + +L ++V + R+G +K+SKRAG ++TLR +++ G D+VRF Sbjct: 371 YPDYVLHKMVTVMRNGEEVKISKRAGSYVTLRDLIEWSNGETVEGQERDLTRGRDAVRFF 430 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK--DIFPDLDFDLFPRN 483 ++ RK FD QS ENPV+YVQYA+AR S+ Q D LD DL P Sbjct: 431 LISRKADTEFVFDVDVALSQSDENPVYYVQYAHARICSVLAQWTDGDEAALLDVDLSPLT 490 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 P+E+ L+ LAEYP ++ A P+++AFYL DLA+ H +++ R Sbjct: 491 A-PREAA-------LLAKLAEYPEALQRALEELGPHQVAFYLRDLAAELHSYYNAER--- 539 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V ++ L M RL L+HA ++ +GL +IGV +P M Sbjct: 540 ----VLVDDVALKMARLTLMHATRQVLRNGLALIGVSAPARM 577 >gi|320534480|ref|ZP_08034950.1| arginyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337] gi|320133311|gb|EFW25789.1| arginyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337] Length = 561 Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 192/563 (34%), Positives = 296/563 (52%), Gaps = 47/563 (8%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +ERPR+ HG STN AM L++ G P +AEL+V R++ + SV +AG GF+N+ L Sbjct: 35 VERPRNRDHGDWSTNVAMQLAKKAGTKPRDLAELLVPRLEALNGIASVEVAGPGFLNIRL 94 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + ++ SIV +G YGRN G +N+E+VSANPTGP+H+G R A VGD+LA + Sbjct: 95 DAASAGELARSIVEAGEAYGRNDSLSGQHINLEYVSANPTGPVHLGGARWAAVGDSLARI 154 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 ++ G EVTREYY ND G QI+ A S+ + PE Y G Y+ + +++ Sbjct: 155 LSACGAEVTREYYFNDHGTQIDRFARSLLASAR------GEQTPEDGYGGAYISEIAQQV 208 Query: 214 -ADKYSS---ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 AD+ ++ + P+ + + + V M ++ +L A D+F ED H Sbjct: 209 TADELAAGRPDPATLPDVEATEVFRSRGVDLMFAAVKAELHAFRSDFDVFFHEDSLH--T 266 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + I L +G + E + T R+T GDD DR L+KSDG Sbjct: 267 SGAVERAITRLRERGVIEE------RDGAT----------WLRTTDFGDDKDRVLIKSDG 310 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCEL 388 + YFAADLAY+ K ERG D +Y+ G+DH GY+ R+ A+ AA + + +L+ +L Sbjct: 311 NAAYFAADLAYYLDKRERGADCALYLFGADHHGYIGRMMAMCAAFGDTPGTNMQILIGQL 370 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V L R+G+P++MSKRAG + L +VD VG D+ R+ + ++D D + + + Sbjct: 371 VNLVRNGVPVRMSKRAGTIVILEDLVDAVGVDAARYALARSSMDSMIDIDLDLLASSTSD 430 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH------L 502 NPV+YVQYA+AR R++ R A + D P E+ F+ + L L Sbjct: 431 NPVYYVQYAHARTRNVARNAAEHGVSRD---------PNEAPFEPAALDDPADAALLGVL 481 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 A++P + A +E +++A YL LA+ +H + R PR + + RL L Sbjct: 482 AQFPATVAQAASLREQHRVARYLEQLAAAYHAWYGATRVTPRGDDAVGSGH---VARLWL 538 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 AV ++ +GL ++GV +P M Sbjct: 539 NDAVGQVLANGLGLLGVAAPERM 561 >gi|109895053|sp|Q3BNA3|SYR_XANC5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS Length = 562 Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 196/560 (35%), Positives = 301/560 (53%), Gaps = 36/560 (6%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 V+ERP+ HG +TNAAM+L++ +P +A+ +VA + DV V IAG GFIN + Sbjct: 32 VVERPKTREHGDFATNAAMLLAKAARSNPRALAQALVAALPASDDVAKVDIAGPGFINFH 91 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L+P+ ++ ++ ++ G +YGR L G G V +E+VSANPTGP+HVGH R A +GD+LA Sbjct: 92 LAPTAYQRQVAHVIKQGHDYGRGLAGNGRSVGVEYVSANPTGPLHVGHGRAAAIGDSLAR 151 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211 ++ +G+ V RE+Y NDAG QI LALSV R Q L + PE Y G Y+ V Sbjct: 152 VLDANGWNVKREFYYNDAGVQIENLALSVQAR-AQGLTPDSDGWPENGYRGDYIADVASA 210 Query: 212 ----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 + D + + L ++ ++V + DL A + DI+ E ++ Sbjct: 211 YLAGDTVDLEGHLVTGTKDPADLESIRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK 270 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 + + + L G+ YE + L +ST GDD DR + KS Sbjct: 271 --DGKVEEAVQKLIASGHTYE----------------EGGALWLKSTDFGDDKDRVMRKS 312 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLL 385 DG+YTYF D+AY K++RG++ I +G+DH G + R+ A A + + +L Sbjct: 313 DGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLTRVRAGLQAMELGIPQGWPEYVL 372 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 ++V + R G +K+SKRAG ++TLR +++E +D+VR+ ++ RK L FD + Q Sbjct: 373 HQMVTVMRGGEEVKLSKRAGSYVTLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARAQ 432 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 S +NPVFYVQYA+AR S+ RQA++ D + D L +++ L+ Y Sbjct: 433 SNDNPVFYVQYAHARVCSVLRQAQEKGYKYD---QAHGLAELACLDDEHSLAVMLELSRY 489 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 P V+E A A EPY++A YL +LA FH W H N ++ A R +L L A Sbjct: 490 PEVVEIAGQALEPYQIAQYLRELAHAFH-TWYH---NSKVLVDDAAERD---AKLTLAVA 542 Query: 566 VASIINSGLNIIGVESPNEM 585 ++ +GL ++GV +P +M Sbjct: 543 TQQVLANGLELLGVSAPEKM 562 >gi|188578900|ref|YP_001915829.1| arginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A] gi|109895055|sp|Q5H5M2|SYR_XANOR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|238689549|sp|B2SS22|SYR_XANOP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|188523352|gb|ACD61297.1| arginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 562 Score = 321 bits (822), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 193/564 (34%), Positives = 303/564 (53%), Gaps = 44/564 (7%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 V+ERP+ HG +TNAAM+L++ +P +A+ ++ + DV V IAG GFIN + Sbjct: 32 VVERPKTREHGDFATNAAMLLAKAARSNPRALAQALLTALPDSNDVTKVEIAGPGFINFH 91 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L+P+ ++ ++ ++ G +YGR L G G V +E+VSANPTGP+HVGH R A +GD+LA Sbjct: 92 LAPTAYQREVAHVIKQGHDYGRGLAGNGRSVGVEYVSANPTGPLHVGHGRAAAIGDSLAR 151 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211 ++ +G+ V RE+Y NDAG QI LALSV R Q L + + PE Y G Y+ V Sbjct: 152 VLDANGWNVKREFYYNDAGVQIENLALSVQAR-AQGLTPDSAGWPENGYRGDYIADVANA 210 Query: 212 ----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 + D + + L ++ ++V + DL A + DI+ E ++ Sbjct: 211 YLTGDTVDMEGHLVTGTKDPADLESIRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK 270 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 + + + L G+ YE + L +ST GDD DR + KS Sbjct: 271 --DGKVEEAVQKLIASGHTYE----------------EGGALWLKSTDFGDDKDRVMRKS 312 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLL 385 DG+YTYF D+AY K++RG++ I +G+DH G + R+ A A + + +L Sbjct: 313 DGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLTRVRAGLQAMELGIPQGWPEYVL 372 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 ++V + RDG +K+ KRAG ++TLR +++E +D+VR+ ++ RK L FD + Q Sbjct: 373 HQMVTVMRDGEEVKLGKRAGGYVTLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARAQ 432 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF----DTSELQLIVH 501 S +NPVFYVQYA+AR S+ RQA++ + + + +E D L +++ Sbjct: 433 SNDNPVFYVQYAHARVCSVLRQAQE-------KGYKYDQVHGLAELARLDDEHSLAVMLE 485 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 L+ YP V+E A EPY++A YL +LA FH W H N ++ A R +L Sbjct: 486 LSRYPEVVEIAGQTLEPYQIAQYLRELAHAFH-TWYH---NSKVLVDDAAERD---AKLT 538 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 L A ++ +GL ++GV +P +M Sbjct: 539 LAVATQQVLANGLELLGVSAPEKM 562 >gi|325928298|ref|ZP_08189500.1| arginyl-tRNA synthetase [Xanthomonas perforans 91-118] gi|325541335|gb|EGD12875.1| arginyl-tRNA synthetase [Xanthomonas perforans 91-118] Length = 562 Score = 321 bits (822), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 196/560 (35%), Positives = 301/560 (53%), Gaps = 36/560 (6%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 V+ERP+ HG +TNAAM+L++ +P +A+ +VA + DV V IAG GFIN + Sbjct: 32 VVERPKTREHGDFATNAAMLLAKAARSNPRALAQALVAALPASDDVAKVDIAGPGFINFH 91 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L+P+ ++ ++ ++ G +YGR L G G V +E+VSANPTGP+HVGH R A +GD+LA Sbjct: 92 LAPTAYQREVAHVIKQGHDYGRGLAGNGRSVGVEYVSANPTGPLHVGHGRAAAIGDSLAR 151 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211 ++ +G+ V RE+Y NDAG QI LALSV R Q L + PE Y G Y+ V Sbjct: 152 VLDANGWNVKREFYYNDAGVQIENLALSVQAR-AQGLTPDSDGWPENGYRGDYIADVASA 210 Query: 212 ----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 + D + + L ++ ++V + DL A + DI+ E ++ Sbjct: 211 YLAGDTVDLEGHLVTGTKDPADLESIRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK 270 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 + + + L G+ YE + L +ST GDD DR + KS Sbjct: 271 --DGKVEEAVQKLIASGHTYE----------------EGGALWLKSTDFGDDKDRVMRKS 312 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLL 385 DG+YTYF D+AY K++RG++ I +G+DH G + R+ A A + + +L Sbjct: 313 DGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLTRVRAGLQAMELGIPQGWPEYVL 372 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 ++V + R G +K+SKRAG ++TLR +++E +D+VR+ ++ RK L FD + Q Sbjct: 373 HQMVTVMRGGEEVKLSKRAGSYVTLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARAQ 432 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 S +NPVFYVQYA+AR S+ RQA++ D + D L +++ L+ Y Sbjct: 433 SNDNPVFYVQYAHARVCSVLRQAQEKGYKYD---QAHGLAELACLDDEHSLAVMLELSRY 489 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 P V+E A A EPY++A YL +LA FH W H N ++ A R +L L A Sbjct: 490 PEVVEIAGQALEPYQIAQYLRELAHAFH-TWYH---NSKVLVDDAAERD---AKLTLAVA 542 Query: 566 VASIINSGLNIIGVESPNEM 585 ++ +GL ++GV +P +M Sbjct: 543 TQQVLANGLELLGVSAPEKM 562 >gi|91777021|ref|YP_546777.1| arginyl-tRNA synthetase [Methylobacillus flagellatus KT] gi|91711008|gb|ABE50936.1| arginyl-tRNA synthetase [Methylobacillus flagellatus KT] Length = 556 Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 204/593 (34%), Positives = 309/593 (52%), Gaps = 51/593 (8%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDR------IVIERPRDCAHGHLSTNAAMILSRPLGLD 60 S LK +L E+ ++V LD I +ERP++ HG STN AM L++PL + Sbjct: 1 MSLALKAHLTEL---LQVAANSLDAGAAISAIQLERPKNTQHGDFSTNLAMTLAKPLRQN 57 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P IAE ++ + V+ V IAG GFIN YLSPS + ++ I G +YG N G+ Sbjct: 58 PRAIAESLIKALPASEYVEKVEIAGAGFINFYLSPSAKQAVVREIQRQGEKYGTNDSGQS 117 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KV +EFVSANPTGP+HVGH R A VGD LA L+A +G+ VTRE+Y NDAGAQI+ L +S Sbjct: 118 RKVQVEFVSANPTGPLHVGHGRGAAVGDCLARLLAANGWAVTREFYYNDAGAQIDNLTVS 177 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHV-----GKELADKYSSELLNFPEEKWLPIVKD 235 V R + + D+ PE Y G Y+ V +E + + + ++ Sbjct: 178 VQARC-KGITPGDAAWPENGYRGDYIADVAAAYMARETVIADDQAVTGKGDAEDAEAIRQ 236 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 ++V + DLKA I D+F E +R + +++L R G+ YE Sbjct: 237 FAVAYLRHEQDLDLKAFKINFDVFSLESALYR--EGKVESTVESLIRSGHTYE------- 287 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 + L R+T GDD DR + K +G YTYF D+AY K++RGF+ +I Sbjct: 288 ---------QDEALWLRTTDFGDDKDRVMRKREGGYTYFVPDVAYHLDKWQRGFERVINE 338 Query: 356 MGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 G+DH + R+ A A V + +L ++V + R G +K+SKRAG ++TLR + Sbjct: 339 QGADHHSTITRVRAGLQALNVGIPQGWPEYVLHQMVTVLRGGEEVKISKRAGSYVTLRDL 398 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQAKDIF 472 ++EVG D+ R+ + R+ L FD + QS +NPV+Y+QYA+AR C + D+ Sbjct: 399 IEEVGCDATRYFLAARRADSQLVFDIDLARAQSNDNPVYYIQYAHARICSVLSEWGGDVA 458 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 DL +++ E E L+ L E+P ++ NA P+ +A YL DLA Sbjct: 459 SLAQADL---SLLETE-----HEAILMQRLGEFPELVANAAQELAPHMVATYLKDLAGDL 510 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H ++ N V+ + +T R+ L+ ++ +GL ++GV +P +M Sbjct: 511 HSYY-----NAHKFLVE--DADVTTARMALISVTRQVLRNGLELLGVSAPEKM 556 >gi|319948886|ref|ZP_08022998.1| arginyl-tRNA synthetase [Dietzia cinnamea P4] gi|319437445|gb|EFV92453.1| arginyl-tRNA synthetase [Dietzia cinnamea P4] Length = 550 Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 201/587 (34%), Positives = 305/587 (51%), Gaps = 46/587 (7%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD ++ ++ L + + + ++ + + +ERPR+ HG +TN A+ L++ +G P Sbjct: 4 ADLAAVIRAALIAVLTERGADTSVVPETVTVERPRNPEHGDYATNVALQLAKKIGSAPRD 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A+ + + DP + S IAG GF+N+ L ++++++ G YG G +V Sbjct: 64 LAQALADALAQDPGIASAEIAGPGFLNIRLDSGAQGSLVATVLEKGERYGYGDAMAGRRV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L ++ SG EVTREYY ND GAQI+ + S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRVLEASGAEVTREYYFNDHGAQIDRFSRSL-- 181 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 A + PE Y G Y++ + ++ + +L+ PE++ L + V M Sbjct: 182 ----AAAARGEETPEDGYAGAYIQDIAAQVMTAHPG-VLDMPEDQALETFRAAGVDLMFS 236 Query: 244 IIRDDLKALNIQHDIFISEDD-FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 I+D L D++ E+ F G + I+ L G +YE Sbjct: 237 HIKDSLAEFGTVFDVYTHENSMFTSG---AVDRAIETLKGNGNLYE-------------- 279 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 RST GDD DR +LKSDG Y A D+AYF K ERGFD IY++G+DH G Sbjct: 280 --SEGAWWLRSTAFGDDKDRVVLKSDGDAAYIAGDIAYFLDKRERGFDLCIYMLGADHHG 337 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 Y+ RL+A AAA+ + A I VL+ ++V L RDG P+KMSKRAG ITL +VD +G D+ Sbjct: 338 YIARLKAAAAALGDDPATIEVLIGQMVNLVRDGEPVKMSKRAGTVITLDDLVDAIGVDAA 397 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 R+ ++ + +D D + +NPVFYVQYA+AR S+ R A D+ Sbjct: 398 RYALIRSSVDQTMDIDLKLWTSATNDNPVFYVQYAHARLCSLARNAADL----------- 446 Query: 483 NVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 V + ++ + E LI + E+PRV+ +A +EP+++A YL +LA +H + Sbjct: 447 GVTTEGADLALLVEDREGALIRTIGEFPRVVASAADLREPHRVARYLEELAGAYHRFYDT 506 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R P L RL L A + +GL +IGV +P M Sbjct: 507 CRVLP---MGDEEPGPLHAARLALSSATRQTLANGLRLIGVTAPERM 550 >gi|58580117|ref|YP_199133.1| arginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331] gi|58424711|gb|AAW73748.1| arginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 590 Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 193/564 (34%), Positives = 303/564 (53%), Gaps = 44/564 (7%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 V+ERP+ HG +TNAAM+L++ +P +A+ ++ + DV V IAG GFIN + Sbjct: 60 VVERPKTREHGDFATNAAMLLAKAARSNPRALAQALLTALPDSNDVTKVEIAGPGFINFH 119 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L+P+ ++ ++ ++ G +YGR L G G V +E+VSANPTGP+HVGH R A +GD+LA Sbjct: 120 LAPTAYQREVAHVIKQGHDYGRGLAGNGRSVGVEYVSANPTGPLHVGHGRAAAIGDSLAR 179 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211 ++ +G+ V RE+Y NDAG QI LALSV R Q L + + PE Y G Y+ V Sbjct: 180 VLDANGWNVKREFYYNDAGVQIENLALSVQAR-AQGLTPDSAGWPENGYRGDYIADVANA 238 Query: 212 ----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 + D + + L ++ ++V + DL A + DI+ E ++ Sbjct: 239 YLTGDTVDMEGHLVTGTKDPADLESIRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK 298 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 + + + L G+ YE + L +ST GDD DR + KS Sbjct: 299 --DGKVEEAVQKLIASGHTYE----------------EGGALWLKSTDFGDDKDRVMRKS 340 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLL 385 DG+YTYF D+AY K++RG++ I +G+DH G + R+ A A + + +L Sbjct: 341 DGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLTRVRAGLQAMELGIPQGWPEYVL 400 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 ++V + RDG +K+ KRAG ++TLR +++E +D+VR+ ++ RK L FD + Q Sbjct: 401 HQMVTVMRDGEEVKLGKRAGGYVTLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARAQ 460 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF----DTSELQLIVH 501 S +NPVFYVQYA+AR S+ RQA++ + + + +E D L +++ Sbjct: 461 SNDNPVFYVQYAHARVCSVLRQAQE-------KGYKYDQVHGLAELARLDDEHSLAVMLE 513 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 L+ YP V+E A EPY++A YL +LA FH W H N ++ A R +L Sbjct: 514 LSRYPEVVEIAGQTLEPYQIAQYLRELAHAFH-TWYH---NSKVLVDDAAERD---AKLT 566 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 L A ++ +GL ++GV +P +M Sbjct: 567 LAVATQQVLANGLELLGVSAPEKM 590 >gi|84622118|ref|YP_449490.1| arginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|109895054|sp|Q2P8B1|SYR_XANOM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|84366058|dbj|BAE67216.1| arginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 562 Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 193/564 (34%), Positives = 303/564 (53%), Gaps = 44/564 (7%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 V+ERP+ HG +TNAAM+L++ +P +A+ ++ + DV V IAG GFIN + Sbjct: 32 VVERPKTREHGDFATNAAMLLAKAARSNPRALAQALLTALPDSNDVTKVEIAGPGFINFH 91 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L+P+ ++ ++ ++ G +YGR L G G V +E+VSANPTGP+HVGH R A +GD+LA Sbjct: 92 LAPTAYQREVAHVIKQGHDYGRGLAGNGRSVGVEYVSANPTGPLHVGHGRAAAIGDSLAR 151 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211 ++ +G+ V RE+Y NDAG QI LALSV R Q L + + PE Y G Y+ V Sbjct: 152 VLDANGWNVKREFYYNDAGVQIENLALSVQAR-AQGLTPDSAGWPENGYRGDYIADVANA 210 Query: 212 ----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 + D + + L ++ ++V + DL A + DI+ E ++ Sbjct: 211 YLAGDTVDMEGHLVTGTKDPADLESIRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK 270 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 + + + L G+ YE + L +ST GDD DR + KS Sbjct: 271 --DGKVEEAVQKLIASGHTYE----------------EGGALWLKSTDFGDDKDRVMRKS 312 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLL 385 DG+YTYF D+AY K++RG++ I +G+DH G + R+ A A + + +L Sbjct: 313 DGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLTRVRAGLQAMELGIPQGWPEYVL 372 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 ++V + RDG +K+ KRAG ++TLR +++E +D+VR+ ++ RK L FD + Q Sbjct: 373 HQMVTVMRDGEEVKLGKRAGGYVTLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARAQ 432 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF----DTSELQLIVH 501 S +NPVFYVQYA+AR S+ RQA++ + + + +E D L +++ Sbjct: 433 SNDNPVFYVQYAHARVCSVLRQAQE-------KGYKYDQVHGLAELARLDDEHSLAVMLE 485 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 L+ YP V+E A EPY++A YL +LA FH W H N ++ A R +L Sbjct: 486 LSRYPEVVEIAGQTLEPYQIAQYLRELAHAFH-TWYH---NSKVLVDDAAERD---AKLT 538 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 L A ++ +GL ++GV +P +M Sbjct: 539 LAVATQQVLANGLELLGVSAPEKM 562 >gi|148244251|ref|YP_001218945.1| arginyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA] gi|166200585|sp|A5CXW2|SYR_VESOH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|146326078|dbj|BAF61221.1| arginyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA] Length = 572 Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 191/586 (32%), Positives = 311/586 (53%), Gaps = 70/586 (11%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 + I ++ +D A G ++N AM+LS +A+ I A DV+ + I G GFI Sbjct: 27 ENIRVDHSKDKAQGDFASNIAMLLSEQAQCSSKVLAQKIKANFPDSVDVEKIEIVGPGFI 86 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N ++S S ++ I+ G YG + IG G +V +EFVSANPTGP+HVGH R G Sbjct: 87 NFFMSQSSNALVVEDIIKQGGNYGLSNIGMGQRVLLEFVSANPTGPLHVGHGRGVAYGAA 146 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 +A L+ G+EV EYY+NDAG Q++ LA+SV+ RY + P+ Y G Y+ + Sbjct: 147 VAHLLRAVGFEVDCEYYVNDAGRQMDILAISVYLRYVET-----EQFPDNCYKGDYIFDI 201 Query: 210 GKELA-----DKYSSELLNFPE----------EKWLP---------------IVKDYSVQ 239 K+++ D +++ + E E+++ V D+++ Sbjct: 202 AKKISGVKKLDIFTNTCKDTSEWKVQKNSIDKERYIDDLIANCKLQLGSDYRKVFDFAIN 261 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 +++ I+ DL +++ + SE D +I+ L GY+YE Sbjct: 262 SILSDIKIDLADFGVEYHQWFSEQSLV--DSGLSEEIVKKLQDLGYIYE----------- 308 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 L FR+T GDD+DR +++ +G +TYF+ D+AY K+ERG+D +I + G+D Sbjct: 309 -----KEGALWFRTTDFGDDLDRVVVRDNGIHTYFSYDIAYHLGKFERGYDRIINIWGAD 363 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ R++A A++ ++ +LL + V L+RDG + MS R+G FITL+ + +EVG+ Sbjct: 364 HHGYIARVKASIKALNYNPDKLEILLVQFVNLFRDGKKVSMSTRSGSFITLKELREEVGN 423 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRF + RK+++ +DF+ K +S ENPVFY+QYAY R S+ +Q D+D + Sbjct: 424 DVVRFFYILRKSTQHMDFNLDLAKSKSNENPVFYIQYAYVRICSVLKQGMPFMADIDLLV 483 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + E LI L Y +++++ + EP+ LA YL LA FH ++++ Sbjct: 484 LNNEL----------ETLLIKELNRYKDILQSSALNYEPHVLACYLRKLAGYFHSYYNN- 532 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ ++ KL RL L+ AV I+ +GLN++G+ +PN M Sbjct: 533 -----CEFL-VDDDKLRNSRLLLITAVQQILANGLNLLGISTPNSM 572 >gi|88799634|ref|ZP_01115210.1| arginyl-tRNA synthetase [Reinekea sp. MED297] gi|88777719|gb|EAR08918.1| arginyl-tRNA synthetase [Reinekea sp. MED297] Length = 561 Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 193/566 (34%), Positives = 312/566 (55%), Gaps = 44/566 (7%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 R++++ RD AHG L++N A++L++P +P +AE ++A + + VD V IAG GFIN Sbjct: 29 RVMVDNTRDKAHGDLASNLALMLAKPCQSNPRAVAEKLIAALPDNQIVDKVEIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL+ +I++ I+ ++G N G+G KV +EFVSANPTGP+HVGH R A +GD+L Sbjct: 89 FYLAGESSAEIVADILNRRAQFGTNDSGQGRKVQVEFVSANPTGPLHVGHGRNAALGDSL 148 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 L+ +G++ TRE+Y NDAGAQIN LA+SV R + L D P Y G Y+ + Sbjct: 149 CRLLEANGWQPTREFYYNDAGAQINNLAISVQSRI-KGLTPEDDAWPADGYRGEYIIELA 207 Query: 211 KE-------LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 + +AD E+ + L + +++V + DLKA +++ D++ E Sbjct: 208 RSYMKGDQVIAD--DREVTAKADADDLDAILEFAVAYLRHEQDLDLKAFDVRFDVYSLES 265 Query: 264 DFHRGD--PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 + + ++ ++DN G+ YE D + ++T GDD D Sbjct: 266 SLYSDGLVEATVKQLVDN----GFTYE----------------DDGAMWLKTTEFGDDKD 305 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--KA 379 R + K DG YTYF D+AY K K+ERGFD +I V G+DH V R+ A A+ E + Sbjct: 306 RVMRKKDGGYTYFLPDVAYHKAKFERGFDRVINVQGADHHSTVTRVRAGLQALKEGIPEG 365 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439 + L +++ + R G +K+SKRAG ++TLR +++E G D+ R+ ++ R+ + FD Sbjct: 366 FPDYALYQMIMVMRGGEEVKLSKRAGSYVTLRDLIEEAGRDATRYFLVSRRADAQITFDI 425 Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 ++ +NPV+Y+QYA+AR + + + +L +D + + D +E +L+ Sbjct: 426 DLATSKNNDNPVYYIQYAHARVHGVLNRLAE--QNLSYDEAAGLAALGKLDLD-AERELM 482 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 L YP V+ A A EP +A YL DLA +FH ++ N V+ ++++ R Sbjct: 483 TQLRRYPDVVTAAADALEPAMIANYLKDLAGLFHSYY-----NSNKMLVEQDDQR--NAR 535 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L AVA ++ +GLN++GV +P M Sbjct: 536 LVLSKAVAQVLANGLNLLGVSAPESM 561 >gi|325919705|ref|ZP_08181707.1| arginyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865] gi|325549813|gb|EGD20665.1| arginyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865] Length = 562 Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 196/561 (34%), Positives = 303/561 (54%), Gaps = 38/561 (6%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 V+ERP+ HG +TNAAM+L++P +P +A+ +VA + +V V IAG GFIN + Sbjct: 32 VVERPKTREHGDFATNAAMLLAKPARSNPRALAQALVAALPASDEVAKVEIAGPGFINFH 91 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L+PS ++ ++ ++ G +YGR L G G V +E+VSANPTGP+HVGH R A +GD+LA Sbjct: 92 LTPSAYQREVAHVIKQGPDYGRGLAGNGRSVGVEYVSANPTGPLHVGHGRAAAIGDSLAR 151 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211 ++ +G+ V RE+Y NDAG QI LALSV R Q L + PE Y G Y+ V Sbjct: 152 VLDANGWNVKREFYYNDAGVQIENLALSVQAR-AQGLTPDSDGWPENGYRGDYIADVANA 210 Query: 212 ----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 + D + + + ++ ++V + DL A + DI+ E ++ Sbjct: 211 YLAGDTVDLEGHLVTGTQDPADIESIRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK 270 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 + + + L G+ YE + L +ST GDD DR + KS Sbjct: 271 --DGKVEEAVQKLIASGHTYE----------------EGGALWLKSTDFGDDKDRVMRKS 312 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ--INVLL 385 DG+YTYF D+AY K++RG++ I +G+DH G + R+ A A+ Q +L Sbjct: 313 DGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLTRVRAGLQALELGIPQGWPEYVL 372 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 ++V + R G +K+SKRAG ++TLR +++E +D+VR+ ++ RK L FD ++Q Sbjct: 373 HQMVTVMRGGEEVKLSKRAGSYVTLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARQQ 432 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE-LQLIVHLAE 504 S +NPVFYVQYA+AR S+ RQA + + + + + + D L ++V L+ Sbjct: 433 SNDNPVFYVQYAHARVCSVLRQAL----EKGYKYEQAHGLAELARLDDEHSLNVMVELSR 488 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 Y V+E A EPY++A YL +LA FH W H N +L A R +L L Sbjct: 489 YAEVVEVAGQTLEPYQIAQYLRELAHAFH-TWYH---NTKLLVDDAAERD---AKLTLAV 541 Query: 565 AVASIINSGLNIIGVESPNEM 585 A ++ +GL ++GV +P +M Sbjct: 542 ATQQVLANGLELLGVSAPEKM 562 >gi|118579453|ref|YP_900703.1| arginyl-tRNA synthetase [Pelobacter propionicus DSM 2379] gi|118502163|gb|ABK98645.1| arginyl-tRNA synthetase [Pelobacter propionicus DSM 2379] Length = 563 Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 202/587 (34%), Positives = 301/587 (51%), Gaps = 37/587 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 +S ++ L+ ++ + + I P + HG S N AM +++ P +AE Sbjct: 6 IASLVETALRAASAAQEITSPSIPAVTIGVPANPDHGDYSCNIAMQMAKAERRAPRQVAE 65 Query: 67 LIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 I + + S IAG GFIN ++SP+ +++L I G YGR G+ KV + Sbjct: 66 TISRHLGDGKGLLSKTDIAGPGFINFFVSPAAWQRLLPEIESQGATYGRTATGEERKVQV 125 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+H+GH R A +GDT+ L+ +G+ VTRE+Y NDAG QI LALSV R Sbjct: 126 EFVSANPTGPLHIGHGRGAAIGDTICRLLDAAGWNVTREFYYNDAGQQITNLALSVQARC 185 Query: 186 QQALYNNDSDLPEGYYPGVYLKHV-----GKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 + ND P Y G Y++ V +E D + + + L +++++V + Sbjct: 186 -LGIDTNDPRWPADGYQGEYIRDVAAAYLARETVDADDRHVTALGDPQNLDAIREFAVAS 244 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 + + DLKA + D+F E + D + +++ L +G+ YE Sbjct: 245 LRREQDLDLKAFGVHFDVFTLESSLY--DDGRVDNVVRQLVEKGHTYE------------ 290 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 L R+T GDD DR + KSDG YTYF D+AY K+ERGF +I GSDH Sbjct: 291 ----QEGALWLRTTEFGDDKDRVMRKSDGGYTYFVPDVAYHLAKWERGFTRVINEQGSDH 346 Query: 361 SGYVKRLEAVAAAVSEKKAQ--INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 + R+ A A+ Q +L ++V + R G +K+SKRAG ++TLR ++DEVG Sbjct: 347 HSTITRVRAGLQALDRGIPQGWPEYVLHQMVTVMRGGEEVKISKRAGSYVTLRDLIDEVG 406 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ RF + RK L FD KEQS +NPV+YVQYA+AR SIF A + L D Sbjct: 407 RDATRFFFIMRKPDSQLVFDIDLAKEQSPDNPVYYVQYAHARICSIFENAVEKGYALPTD 466 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + ES + ++L LA P ++++ EP++L YL DLA+ FH ++ Sbjct: 467 AGSVRLELLESTEELQLIKL---LAALPNTVDDSARFFEPHRLTNYLTDLAASFHSFYNR 523 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R V N LT RL L+ A +N+ L+I+G+ +P M Sbjct: 524 NR-------VLTENSDLTGARLYLLKRTAQTLNNALSILGISAPERM 563 >gi|225022821|ref|ZP_03712013.1| hypothetical protein CORMATOL_02866 [Corynebacterium matruchotii ATCC 33806] gi|224944428|gb|EEG25637.1| hypothetical protein CORMATOL_02866 [Corynebacterium matruchotii ATCC 33806] Length = 550 Score = 320 bits (820), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 192/587 (32%), Positives = 302/587 (51%), Gaps = 46/587 (7%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 +D SS + +I +++ IL +++V+ERPR+ HG +TN A+ +++ +G++P Sbjct: 4 SDLSSLINTEAHKILADRQLDVTILPEQVVVERPRNPEHGDYATNLALQIAKKVGMNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A L+V + ++ +V IAG GFIN+ L+ + +I++ I+V+G YG N + G ++ Sbjct: 64 LASLLVDALSAHDEIATVDIAGPGFINIRLAAAAQGQIVADILVAGTTYGHNSLYSGERI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++A G +VTREYY ND G QI+ S+ Sbjct: 124 NLEFVSANPTGPVHLGSTRWAAVGDSLGRILAACGADVTREYYFNDHGRQIDRFTNSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + +PE Y G Y+ + + + +L E + V+ M Sbjct: 184 AAK------GQPVPEDGYGGDYITEIAANIVAQEPG-VLQQSEPDMRETFRALGVELMFD 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L + D++ E+ + + +D L G +Y Sbjct: 237 HIKTTLHEFGVDFDVYFHENSLF--ESGAVDRAVDKLKENGNLY---------------- 278 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 RST GDD DR ++KSDG Y A D+AY K+ERG IY++G+DH GY Sbjct: 279 FSNGAWWLRSTNYGDDKDRVVIKSDGDAAYIAGDIAYVANKFERGHTRSIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL A AAA+ + VL+ +LV L RDG ++MSKRAG ITL +V+ +G D+ R Sbjct: 339 ISRLRAAAAAMGYNPNNVEVLIGQLVNLVRDGEAVRMSKRAGTIITLDDLVEAIGIDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF-----PDLDFD 478 + ++ LD D QS ENPV+YVQYA+AR S+ ++A + PDL Sbjct: 399 YSLVRSSVDSTLDIDLTLWANQSNENPVYYVQYAHARLCSLAKKAAAVGVTASKPDLSL- 457 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + E LI L EYP V++ A +EP+++A Y+ +LA FH + Sbjct: 458 -----------LTEDHEGTLIRTLGEYPTVVKAAAELREPHRIARYIEELAGTFHRFYDT 506 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P+ + + RL L A +I + L ++GV +P +M Sbjct: 507 CQILPK---AGEQAQPIHTARLALATATRQVIANALGLLGVTAPEQM 550 >gi|317131750|ref|YP_004091064.1| arginyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3] gi|315469729|gb|ADU26333.1| arginyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3] Length = 564 Score = 320 bits (820), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 189/557 (33%), Positives = 303/557 (54%), Gaps = 36/557 (6%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFINLY 92 +E P D AHG S N AM+ +R L + P IAE ++ + + +AG GF+N + Sbjct: 39 VEVPADRAHGDFSANVAMVSARALKMPPRKIAEAVLGELCLKGTYFTHAEVAGPGFLNFF 98 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L+P++ IL+++ G Y G G K+ +E+VSANPTGPMH+G+ R +GD LA+ Sbjct: 99 LAPAWYTAILNAVQTEGEGYTHTAQGGGKKIMVEYVSANPTGPMHMGNARGGALGDCLAA 158 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGK 211 ++ +GY+VTRE+Y+NDAG QI A+S+ RY Q D+ PE Y G ++ K Sbjct: 159 VLEHAGYDVTREFYVNDAGNQIAKFAVSLEARYFQIFRGEDAVPFPEDGYHGDDVRERAK 218 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 E A +Y + L+ PE++ ++ + ++ +K + DDL I++D++ E H + Sbjct: 219 EFAAQYGKQYLDAPEDERRKVLAAFGIERNVKKLHDDLLKYRIEYDVWFRESVLH--EDG 276 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + D+I L +G YE L + +T G + D L++++G Sbjct: 277 ELADVIALLKERGAAYE----------------KDGALWYAATRFGAEKDEVLVRANGIP 320 Query: 332 TYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFAAD+AY + K+E RGF ++ V G+DH G+V RL+ A+ +++V+L +LVR Sbjct: 321 TYFAADIAYHRNKFEKRGFAKVVDVWGADHHGHVARLKGAMDAIGVGGDKLDVVLTQLVR 380 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L R G ++MSKR G I+L +++EV D+ RF R+ + LDFD EQS +NP Sbjct: 381 LMRGGEVVRMSKRTGKAISLDDLLEEVPVDAARFFFNLREANSHLDFDLDLAVEQSSQNP 440 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF--DTSELQLIVHLAEYPRV 508 V+YVQYA+AR SI K++ + ++ PR P+E + E +LI HL P Sbjct: 441 VYYVQYAHARIWSIL---KNLAAE---NIHPRACTPEEFGLLSASEERELIRHLGLLPNE 494 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 I+ A A +P ++ Y+ DLA+ FH ++ +V+ + L RL L V Sbjct: 495 IDEAAKAYDPARITRYVLDLATKFHKFYN-------AHYVRGEDEPLMQARLNLCLCVRD 547 Query: 569 IINSGLNIIGVESPNEM 585 ++ L+++ + +P M Sbjct: 548 VLKYVLDMLKITAPQTM 564 >gi|21233284|ref|NP_639201.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770242|ref|YP_245004.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. 8004] gi|188993440|ref|YP_001905450.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. B100] gi|23822184|sp|Q8P455|SYR_XANCP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|81303810|sp|Q4UPN9|SYR_XANC8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|229558815|sp|B0RXM6|SYR_XANCB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|21115122|gb|AAM43092.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575574|gb|AAY50984.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. 8004] gi|167735200|emb|CAP53412.1| unnamed protein product [Xanthomonas campestris pv. campestris] Length = 562 Score = 320 bits (819), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 196/560 (35%), Positives = 302/560 (53%), Gaps = 36/560 (6%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 V+ERP+ HG +TNAAM+L++ +P +A+ ++A + DV V IAG GFIN + Sbjct: 32 VVERPKTREHGDFATNAAMLLAKAARSNPRALAQALLAALPASDDVARVEIAGPGFINFH 91 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L+P+ ++ + ++ G +YGR L G G V +E+VSANPTGP+HVGH R A +GD+LA Sbjct: 92 LTPAAYQREVIHVIKQGHDYGRGLAGNGRSVGVEYVSANPTGPLHVGHGRAAAIGDSLAR 151 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211 ++ +G+ V RE+Y NDAG QI LALSV R Q L + + PE Y G Y+ V K Sbjct: 152 VLDANGWNVKREFYYNDAGVQIENLALSVQAR-AQGLTPDSAGWPENGYRGDYIADVAKA 210 Query: 212 ----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 + D + + L ++ ++V + DL A + DI+ E ++ Sbjct: 211 YLAGDTVDLEGHLVTGTKDPADLESIRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK 270 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 + + + L G+ YE + L +ST GDD DR + KS Sbjct: 271 --DGKVDEAVQKLIASGHTYE----------------EGGALWLKSTDFGDDKDRVMRKS 312 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLL 385 DG+YTYF D+AY K++RG++ I +G+DH G + R+ A A + + +L Sbjct: 313 DGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLTRVRAGLQAMELGIPQGWPEYVL 372 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 ++V + R G +K+SKRAG ++TLR +++E +D+VR+ ++ RK L FD + Q Sbjct: 373 HQMVTVMRGGEEVKLSKRAGSYVTLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARAQ 432 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 S +NPVFYVQYA+AR S+ RQA++ L +D + D L L++ L+ Y Sbjct: 433 SNDNPVFYVQYAHARVCSVLRQAQE--KGLKYDQ-THGMAELARLDDEHSLALMLELSRY 489 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 V+E A EPY++A YL +LA FH W H N ++ A R +L L A Sbjct: 490 AEVVELAGQTLEPYQIAQYLRELAHAFH-TWYH---NSKVLVDDAAERD---AKLTLAVA 542 Query: 566 VASIINSGLNIIGVESPNEM 585 ++ +GL ++GV +P +M Sbjct: 543 TQQVLANGLELLGVSAPEKM 562 >gi|307825835|ref|ZP_07656051.1| arginyl-tRNA synthetase [Methylobacter tundripaludum SV96] gi|307733143|gb|EFO04004.1| arginyl-tRNA synthetase [Methylobacter tundripaludum SV96] Length = 586 Score = 320 bits (819), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 194/592 (32%), Positives = 315/592 (53%), Gaps = 61/592 (10%) Query: 26 KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85 ++I I I+R RD HG ++N A++L++ + +P +AE ++A + D + V +AG Sbjct: 24 QEITPNITIDRTRDPQHGDFASNLALMLAKQVNTNPRQLAEKLIAALPQDTAIVKVELAG 83 Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 GFIN ++ P+ +++ I G ++G + +G G KV +EFVSANPTGP+HVGH R A Sbjct: 84 PGFINFFIDPTAQYQVIKQIHDQGPKFGLSNVGAGKKVQVEFVSANPTGPLHVGHGRGAA 143 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205 G +A L+ +G++V REYY+NDAG Q++ LA S++ RY + P Y G Y Sbjct: 144 YGSAVADLLQATGFDVHREYYVNDAGRQMDILATSIWLRYLEEC-GEVVHFPSNAYRGEY 202 Query: 206 LKHVGKELADKYSSEL-----LNF----PEE-----------------KWL---PIVKDY 236 ++ + + ++E L F P+E K L P+ +D+ Sbjct: 203 VREIAWNIHKNANNEYRRPVELVFEDIPPDEPAGGDKEEHIDALIARAKTLLGAPLYQDF 262 Query: 237 SVQAMMKIIRD---DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 + I+ D DL + + + SE D + ++ L G++YE Sbjct: 263 FQIGLNNILEDIKIDLSEFGVDYQEWFSERRLM--DDGSVEKALERLRAAGHLYE----- 315 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353 K T F +GD+ DR +++ +G TYFA+D+AY K +RGFD +I Sbjct: 316 -KDGAT----------WFACADLGDEKDRVVVRENGQSTYFASDIAYHMNKLDRGFDQII 364 Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 + G+DH GY+ R+ A A+ ++++ VLL + LYR ++MS R+G+F+TLR + Sbjct: 365 NIWGADHHGYIPRVRAAIQALGADESKLKVLLVQFASLYRGEEKVQMSTRSGEFVTLRQL 424 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 +EVG D+ RF + R++ + +DFD +S ENPVFYVQYAYAR S+ RQ + Sbjct: 425 RNEVGKDAARFFYVMRRSEQHMDFDLKLATSKSNENPVFYVQYAYARVCSVLRQLDEKNW 484 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 + + L N+ E +T+ L+ LA YP V+E A + EP++L YL +LA+ FH Sbjct: 485 ERNLPLGMENLALLTEEHETN---LLGTLARYPEVLERAALQYEPHQLIQYLRELANEFH 541 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ N V+ + K+ RL L+ AV I+ +GL+++ + +P M Sbjct: 542 TYY-----NAHQFLVE--DAKIRNARLNLICAVKQILANGLSLLNINTPEAM 586 >gi|120553753|ref|YP_958104.1| arginyl-tRNA synthetase [Marinobacter aquaeolei VT8] gi|166232799|sp|A1TYU8|SYR_MARAV RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|120323602|gb|ABM17917.1| arginyl-tRNA synthetase [Marinobacter aquaeolei VT8] Length = 561 Score = 319 bits (818), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 195/562 (34%), Positives = 304/562 (54%), Gaps = 50/562 (8%) Query: 38 RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 +D +HG + N A++ S+ G P +AE +VA + + V+ V IAG GFIN ++S + Sbjct: 36 KDKSHGDYACNIALVASKAAGCPPRKLAEALVAALPENSAVEKVEIAGPGFINFFMSTAS 95 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 I+++I+ ++GRN G G +V +EFVSANPTGP+HVGH R A +GD L L+ + Sbjct: 96 AFGIVNTILDEAQQFGRNNSGNGERVQVEFVSANPTGPLHVGHGRGAAIGDCLCRLLEAN 155 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE----- 212 GY+VTRE+Y NDAGAQIN LALSV R + L D PE Y G Y+ V Sbjct: 156 GYDVTREFYYNDAGAQINNLALSVQSRV-KGLTPEDESWPEDGYRGDYIVDVANAYLAGE 214 Query: 213 --LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 +AD PE++ +++++V + + DLKA +Q D++ E + + Sbjct: 215 TVVADDREVTAKADPEDR--DAIREFAVAYLRREQDLDLKAFGVQFDVYFLESSLY--ED 270 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + ++ L GY YE + ++T GDD DR + K DG Sbjct: 271 GKVEATVERLKANGYTYE----------------QDGAMWLKTTEFGDDKDRVMRKKDGG 314 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI-----NVLL 385 YTYF D+AY K++RGF +I G+DH V R+ A A+ KA I + +L Sbjct: 315 YTYFLPDVAYHLDKWQRGFTTVINEQGADHHSTVTRVRAGLQAL---KADIPQGWPDYVL 371 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 ++V + R G +K+SKRAG ++T+R ++DEVG D+ RF + R+ L FD + Q Sbjct: 372 HQMVMVTRSGQEVKISKRAGSYVTVRDLIDEVGRDATRFFLAARRVDSQLTFDIDLARSQ 431 Query: 446 SKENPVFYVQYAYARCRSIFRQ--AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503 + ENPV+Y+QYA+AR S+ R+ A+ + ++ + +++ + E +L LA Sbjct: 432 TNENPVYYIQYAHARICSVLRKLAAEGVQRGMNECVGELSLLTLD-----EEKELANQLA 486 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 +YP +I N+ +EP+ L YL +LA FH +++ + V + L R+ L Sbjct: 487 KYPELIANSAAQREPHHLTHYLRELAGQFHTYYNAHK-------VLIEDTALRDARVSLY 539 Query: 564 HAVASIINSGLNIIGVESPNEM 585 AV +I +GL+++GV +P EM Sbjct: 540 LAVRQVIANGLDLLGVSAPEEM 561 >gi|302869607|ref|YP_003838244.1| arginyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029] gi|315503931|ref|YP_004082818.1| arginyl-tRNA synthetase [Micromonospora sp. L5] gi|302572466|gb|ADL48668.1| arginyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029] gi|315410550|gb|ADU08667.1| arginyl-tRNA synthetase [Micromonospora sp. L5] Length = 555 Score = 319 bits (818), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 187/561 (33%), Positives = 300/561 (53%), Gaps = 42/561 (7%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 + +ERPR+ HG ++ A+ LS+ +G+ P +A + + P + SV IAG GF+N Sbjct: 31 QTTVERPRNPDHGDYASTLALQLSKKVGVPPRELATALADELAKAPGIKSVEIAGPGFLN 90 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + L + ++ IV +G YGR+ G ++N+EFVSANPTGP+H+G R A VGD L Sbjct: 91 VRLDAAAAGQLAKVIVEAGPAYGRSDTLAGQRINLEFVSANPTGPVHIGGVRWAAVGDAL 150 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + L+ +G +V EYY NDAG+QI+ A S+ + PE Y G Y+ + Sbjct: 151 SRLLRATGADVGTEYYFNDAGSQIDRFARSLLAAAK------GEPAPEDGYGGAYIAEIA 204 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 E+ + ++L+ PE+ + ++ VQ M I+ L+ ++ D + +E D H D Sbjct: 205 AEVV-RLRPDVLDLPEDAAQEVFRNEGVQLMFAEIKSSLRDFGVEFDTYFNEKDLH--DG 261 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + +D L QG+V+E R+T GDD DR L KS+G Sbjct: 262 GALDAALDRLREQGHVFE----------------SEGATWLRTTEFGDDKDRVLRKSNGE 305 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELV 389 +TYFAAD AY+ K ERGFD ++ ++G+DH GY+ R++A++A + A+ + +L+ +LV Sbjct: 306 WTYFAADCAYYLNKRERGFDRVVIMLGADHHGYIGRMKAMSACFGDDPARNLEILIGQLV 365 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 L RDG P++MSKRAG +TL +VD +G D+ R+ + +D D +N Sbjct: 366 NLVRDGAPVRMSKRAGTVVTLEDLVDAIGVDAARYALARYSADSPIDIDVELWTRAKNDN 425 Query: 450 PVFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 PV+YVQY AR + R A +I D F ++ + E +L+ LAE+P V Sbjct: 426 PVYYVQYVAARTAGVARNAAEIGLTRGDAAAFQPELLGHDKEN-----ELLKALAEFPAV 480 Query: 509 IENATIAQEPYKLAFYLYD-LASVFHGHWSHGRENPRLRFVQANNRKLT---MMRLQLVH 564 + A +EP+++A YL + +A +H + + R P+ + ++T RL L Sbjct: 481 VATAAELREPHRVARYLEESVAQAYHRFYDNCRIAPQ------GDEEITDTHRARLWLND 534 Query: 565 AVASIINSGLNIIGVESPNEM 585 A +I +GL+++GV +P M Sbjct: 535 ATRVVIANGLHLLGVSAPERM 555 >gi|325002812|ref|ZP_08123924.1| arginyl-tRNA synthetase [Pseudonocardia sp. P1] Length = 550 Score = 319 bits (818), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 194/556 (34%), Positives = 280/556 (50%), Gaps = 44/556 (7%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +ERPR+ HG +TN A+ ++ G++P +A + + V IAG GFINL L Sbjct: 35 VERPRNPEHGDYATNIALRTAKKAGVNPRELATWLAEELATRDGVAGAEIAGPGFINLRL 94 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + I+ ++ G YG GT++N+EFVSANPTGP+H+G R A VGD L + Sbjct: 95 AADAQGAIVGEVLAQGERYGTGDELAGTRMNLEFVSANPTGPIHLGGTRWAAVGDALGRV 154 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + G +VTREYYINDAGAQI+ A S+ A PE Y G Y+ + + + Sbjct: 155 LVARGADVTREYYINDAGAQIDHFAASLIAAATGA------PTPENGYGGAYIGEIAERV 208 Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273 +L PE + + V M++ +R L D++ SE H + + Sbjct: 209 V-AAEPGILELPEAERHQAFRRTGVALMLEEMRRSLHEFGTDFDVWFSELSLH--ESGAV 265 Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333 D + L G +YE RST GDD DR ++KSDG+ Y Sbjct: 266 EDSVRQLKDDGSLYE----------------KDGAWWLRSTEQGDDKDRVVIKSDGTPAY 309 Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393 A D+AY + K RGFD +Y++G+DH GY RL+AVAAA + + + VL+ ++V L R Sbjct: 310 VAGDIAYLRDKRGRGFDRCLYMLGADHHGYTVRLKAVAAAFGDDPSVVEVLIGQMVNLIR 369 Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453 G P++MSKRAG +TL VD VG D+ R+ ++ LD D V ++ ENPVFY Sbjct: 370 AGEPVRMSKRAGTIVTLEDFVDAVGVDAARYSLVRSSVDSTLDIDLDLVSSRTSENPVFY 429 Query: 454 VQYAYARCRSIFRQAKD--IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511 VQYA+AR S+ R A D + P + L + E LI L E+P V+ Sbjct: 430 VQYAHARLSSLARNAADLGVEPGDGYGLLVHD----------REGDLIRTLGEFPDVVRT 479 Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR--KLTMMRLQLVHAVASI 569 A +EP+++A YL LA +H + R P Q + L RL L A + Sbjct: 480 AAELREPHRVARYLESLAGAYHKFYDSCRVLP-----QGDEEISDLHRARLSLCGAARRV 534 Query: 570 INSGLNIIGVESPNEM 585 + +GL ++GV +P M Sbjct: 535 LANGLGLLGVGAPERM 550 >gi|254187942|ref|ZP_04894454.1| arginyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237] gi|254196876|ref|ZP_04903300.1| arginyl-tRNA synthetase [Burkholderia pseudomallei S13] gi|157935622|gb|EDO91292.1| arginyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237] gi|169653619|gb|EDS86312.1| arginyl-tRNA synthetase [Burkholderia pseudomallei S13] Length = 594 Score = 319 bits (818), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 203/611 (33%), Positives = 319/611 (52%), Gaps = 65/611 (10%) Query: 11 LKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 L+N +K++ K + +L I +ERP+ AHG ++ N A+ L++PLG +P +AE Sbjct: 13 LENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQLAEQ 72 Query: 68 IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 IVA + P+ VD+ IAG GFINL L+P+ + ++ +++ G +G + G +V Sbjct: 73 IVAALTAQPEAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVLAQGRAFGASERDHGKRV 132 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA+S Sbjct: 133 LLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAISTQA 192 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPIVKDYS 237 R + L D+ PE Y G Y+ + G+ +A + + + L ++ ++ Sbjct: 193 R-ARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRDVEDLEAIRKFA 251 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 V + + DLKA ++ D + E + + +D L G YE Sbjct: 252 VTYLRREQDMDLKAFGVKFDQYYLESSLY--TEGRVEKTVDALTAAGMTYE--------- 300 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 L R+T GDD DR + K+DG+YTYF D+AY K+ERGF +I + G Sbjct: 301 -------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVINIQG 353 Query: 358 SDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV- 414 SDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+R ++ Sbjct: 354 SDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVRDLIE 413 Query: 415 ----------------DEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454 DE G D+VRF ++ RK FD +Q+ ENPV+YV Sbjct: 414 WSGGATPGSEGSPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYV 473 Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514 QYA+AR S+ + K + D L ++ P +S+ + L+ LAEYP V+ +A Sbjct: 474 QYAHARICSVINEWKSRYGATDALLPGADLSPLDSK---QAMALMQKLAEYPDVLAHAAG 530 Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 P+ +AFYL +LAS FH ++ R V + + R+ L+ A ++ +GL Sbjct: 531 ELAPHAVAFYLRELASEFHSFYNAER-------VLVDEQAPRTARVALLAATRQVLENGL 583 Query: 575 NIIGVESPNEM 585 ++GV +P++M Sbjct: 584 AMLGVSAPSKM 594 >gi|220927743|ref|YP_002504652.1| arginyl-tRNA synthetase [Clostridium cellulolyticum H10] gi|254782954|sp|B8I592|SYR_CLOCE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|219998071|gb|ACL74672.1| arginyl-tRNA synthetase [Clostridium cellulolyticum H10] Length = 564 Score = 319 bits (817), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 195/558 (34%), Positives = 304/558 (54%), Gaps = 34/558 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90 I IE PR+ HG STN AM +++ P IA++I+ I D +D V AG GFIN Sbjct: 37 ITIEIPREKGHGDFSTNVAMQITKAAKKAPRQIADIIIKNIVTDGTYIDKVTCAGPGFIN 96 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 L SYL + ++ I YGR IG G KV +EFVSANPTGP+H+G+ R +GD + Sbjct: 97 FTLDNSYLYETVNIIQQEKENYGRINIGNGKKVMVEFVSANPTGPLHMGNARGGALGDCI 156 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHV 209 AS++ +GY VTRE+ INDAG QI S+ RY Q + D+ + PE Y G + Sbjct: 157 ASVLDAAGYNVTREFLINDAGNQIEKFGTSLEARYIQLIKGEDAIEFPEDGYQGEDITEH 216 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 K+ + + +N E+ + D+++ + I++ L++ I DI+ SE H+ Sbjct: 217 MKDFIAIHGDKYINTDSEERKKVFVDFALPRNIARIKEGLESYGIHFDIWFSEQSLHK-- 274 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF-RSTMVGDDVDRPLLKSD 328 + + I L +G C ++++ L+ + +++G + D L++++ Sbjct: 275 SGEVAETIQLLKDRG-----------------CTVEKEGALWLKGSVIGSEKDEVLVRNN 317 Query: 329 GSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387 G TYFAAD+AY + K+E RGF+ +I + G+DH G+V R++A AA+ +++V+L + Sbjct: 318 GIPTYFAADIAYHRNKFEKRGFEWVINLWGADHHGHVARMKAAMAALGINPDKLDVVLFQ 377 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 LVRLYR+G +MSKR G I+L +V+EVG D VR+ + + LDFD +QS Sbjct: 378 LVRLYRNGEIARMSKRTGKSISLMDLVEEVGRDGVRYFFNTKASGSHLDFDLDLAVKQSN 437 Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 ENPVFYVQYA+AR S+F+ + + N I E EL+LI L+EYP Sbjct: 438 ENPVFYVQYAHARICSMFK----LLESEGIKVPSANAIKAELLDKPEELELIRKLSEYPD 493 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 + + EP +L Y++D+AS FH ++ R V+ +L RL LV Sbjct: 494 EVRISAETLEPSRLTRYVHDVASTFHSFYNACR-------VRGEEEELMQARLVLVDCTR 546 Query: 568 SIINSGLNIIGVESPNEM 585 ++ + L+++ + +P M Sbjct: 547 IVVKNVLDLLSITAPERM 564 >gi|294648857|ref|ZP_06726313.1| arginine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194] gi|292825248|gb|EFF83995.1| arginine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194] Length = 599 Score = 319 bits (817), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 193/596 (32%), Positives = 309/596 (51%), Gaps = 72/596 (12%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 + R +D +HG ++N AMI S+ G+ P +AE I+A + D+ IAG GFIN +L Sbjct: 32 LTRTKDRSHGDFASNIAMIGSKAAGMKPRDLAEKILAALPEVADISKAEIAGPGFINFFL 91 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + +L I +YGR+ + K+ +EFVSANPT +HVGH R A G T+A+L Sbjct: 92 NADQRFAVLDQIEAQKDQYGRSQVNAAKKIQVEFVSANPTSSLHVGHGRGAAYGMTVANL 151 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + +G +V REYY+NDAG Q++ LA S + RY + L P+ Y G Y+K + +E+ Sbjct: 152 LEATGAKVDREYYVNDAGRQMDILATSTYLRYLE-LTGQTLVFPKNAYQGDYVKEIAQEI 210 Query: 214 ADK---------------------YSSEL--------LNFPEEKWLP------------- 231 +K Y+ L L+ +EK + Sbjct: 211 INKDGNAYVRAVADIYKDVPEDVQYAEALDAEGNKVVLSGDKEKHIDGLITNSQQQLGEG 270 Query: 232 --IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 + ++ A++ I+DDL + D + SE I + + L ++GY+YE Sbjct: 271 YRVFHQAALHAILDDIKDDLADFGVTFDEWFSEASL----TEKIDEALATLDQRGYLYE- 325 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349 + F+ST GD+ DR + + +G TYFA+D+AY K +RG+ Sbjct: 326 ---------------KEGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGY 370 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 ++I + GSDH GY+ R++A A+ ++ VLL + V L+R G ++MS R+G F+T Sbjct: 371 TDLIDIWGSDHHGYISRVKAAIDAMGYDSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVT 430 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 LR + EVG+D+ RF + RK+ + +DFD QSK+N V+Y+QYA+AR SI +AK Sbjct: 431 LRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARVNSIVNRAK 490 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 + + FD+ + D +E +++ LA YP ++ A EP+++ YL DLA Sbjct: 491 E--KGIAFDVASARQVANLLTLD-AETEILAKLAAYPEIVIRAANVCEPHQIGNYLKDLA 547 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++FHG ++ ++FV N L+ RL L V ++ +GL ++GV +P M Sbjct: 548 ALFHGWYAQ----DGVKFVDEANIPLSQARLLLSINVQQVLRNGLELLGVSAPEAM 599 >gi|226952204|ref|ZP_03822668.1| arginyl-tRNA synthetase [Acinetobacter sp. ATCC 27244] gi|226837042|gb|EEH69425.1| arginyl-tRNA synthetase [Acinetobacter sp. ATCC 27244] Length = 599 Score = 319 bits (817), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 193/596 (32%), Positives = 309/596 (51%), Gaps = 72/596 (12%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 + R +D +HG ++N AMI S+ G+ P +AE I+A + D+ IAG GFIN +L Sbjct: 32 LTRTKDRSHGDFASNIAMIGSKAAGMKPRDLAEKILAALPEVADISKAEIAGPGFINFFL 91 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + +L I +YGR+ + K+ +EFVSANPT +HVGH R A G T+A+L Sbjct: 92 NADQRFAVLDQIEAQKDQYGRSQVNAAKKIQVEFVSANPTSSLHVGHGRGAAYGMTVANL 151 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + +G +V REYY+NDAG Q++ LA S + RY + L P+ Y G Y+K + +E+ Sbjct: 152 LEATGAKVDREYYVNDAGRQMDILATSTYLRYLE-LTGQTLVFPKNAYQGDYVKEIAQEI 210 Query: 214 ADK---------------------YSSEL--------LNFPEEKWLP------------- 231 +K Y+ L L+ +EK + Sbjct: 211 INKDGNTYVRAVADIYKDVPEDVQYAEALDAEGNKVVLSGDKEKHIDGLIANSQQQLGEG 270 Query: 232 --IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 + ++ A++ I+DDL + D + SE I + + L ++GY+YE Sbjct: 271 YRVFHQAALHAILDDIKDDLADFGVTFDEWFSEASL----TEKIDEALATLDQRGYLYE- 325 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349 + F+ST GD+ DR + + +G TYFA+D+AY K +RG+ Sbjct: 326 ---------------KEGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGY 370 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 ++I + GSDH GY+ R++A A+ ++ VLL + V L+R G ++MS R+G F+T Sbjct: 371 TDLIDIWGSDHHGYISRVKAAIDAMGYDSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVT 430 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 LR + EVG+D+ RF + RK+ + +DFD QSK+N V+Y+QYA+AR SI +AK Sbjct: 431 LRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARVNSIVNRAK 490 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 + + FD+ + D +E +++ LA YP ++ A EP+++ YL DLA Sbjct: 491 E--KGIAFDVASARQVANLLTLD-AETEILAKLAAYPEIVIRAANVCEPHQIGNYLKDLA 547 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++FHG ++ ++FV N L+ RL L V ++ +GL ++GV +P M Sbjct: 548 ALFHGWYAQ----DGVKFVDEANIPLSQARLLLSINVQQVLRNGLELLGVSAPEAM 599 >gi|167835227|ref|ZP_02462110.1| arginyl-tRNA synthetase [Burkholderia thailandensis MSMB43] Length = 594 Score = 319 bits (817), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 204/611 (33%), Positives = 316/611 (51%), Gaps = 65/611 (10%) Query: 11 LKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 L+N +K++ K + +L I +ERP+ AHG ++ N A+ L++PLG +P +AE Sbjct: 13 LENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQLAER 72 Query: 68 IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 IVA + P VD+ IAG GFINL L+P+ + ++ ++ G +G + +G +V Sbjct: 73 IVAALTTQPAAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVFAEGRAFGASERERGKRV 132 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA+S Sbjct: 133 LLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAISTQA 192 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPIVKDYS 237 R + L D+ PE Y G Y+ + G+ +A + + + L ++ ++ Sbjct: 193 R-ARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRDAEDLEAIRKFA 251 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 V + + DLKA ++ D + E + + +D L G YE Sbjct: 252 VAYLRREQDMDLKAFGVKFDQYYLESSLY--TEGRVEKTVDALIEAGMTYE--------- 300 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 L R+T GDD DR + K+DG+YTYF D+AY K+ERGF +I + G Sbjct: 301 -------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVINIQG 353 Query: 358 SDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV- 414 SDH G + R+ A V K + +L ++V + RDG +K+SKRAG ++T+R ++ Sbjct: 354 SDHHGTIARVRAGLQGLHVGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVRDLIE 413 Query: 415 ----------------DEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454 DE G D+VRF ++ RK FD +Q+ ENPV+YV Sbjct: 414 WSGGATPGSEASPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYV 473 Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514 QYA+AR S+ + K + D L + P +S+ + L+ LAEYP V+ +A Sbjct: 474 QYAHARICSVLNEWKSRYGATDALLPGAELSPLDSK---QAMALMQKLAEYPDVLAHAAN 530 Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 P+ +AFYL +LAS FH ++ R V + R+ L+ A ++ +GL Sbjct: 531 ELAPHAVAFYLRELASEFHSFYNAER-------VLVDEEAPRTARVALLAATRQVLENGL 583 Query: 575 NIIGVESPNEM 585 ++GV +P++M Sbjct: 584 AMLGVSAPSKM 594 >gi|163840172|ref|YP_001624577.1| arginyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209] gi|189083543|sp|A9WNA7|SYR_RENSM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|162953648|gb|ABY23163.1| arginyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209] Length = 549 Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 186/557 (33%), Positives = 308/557 (55%), Gaps = 44/557 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + +ERP++ HG +TN A+ L++P GL+P +AE++ +R++ V +V IAG GF+N+ Sbjct: 34 VRVERPKNRDHGDWATNIALQLAKPAGLNPRAVAEILKSRLEAIEGVAAVDIAGPGFLNI 93 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + + +IV +G +YG N G +N+EFVSANPTGP+H+ H R A VGD++A Sbjct: 94 TLDAAAAGALAKNIVHAGSQYGENQALTGQVINVEFVSANPTGPLHLAHTRWAAVGDSVA 153 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 L+ SG VT EYYINDAG+Q+N SV + PEG YPG Y+ + + Sbjct: 154 RLLKASGATVTSEYYINDAGSQMNNFGASVLAAIK------GEPTPEGGYPGAYITELAQ 207 Query: 212 ELA--DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 ++ Y +EL +E LP+V+ + A + I++ L + D+F SE + H Sbjct: 208 QVVRDHPYVTELT---DEAALPVVRAAAYLAQLADIKETLNDFGVHFDVFFSEQELH--S 262 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + +D L QG+V+ + R+T DD DR L++++G Sbjct: 263 TGAVEKAVDRLRGQGHVF----------------YQDGAIWLRTTDFTDDKDRVLIRANG 306 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCEL 388 TYFAAD AY+ K +RGF IY++G+DH GY+ RL+A+AA + A+ I VL+ ++ Sbjct: 307 EPTYFAADAAYYLSKKDRGFVEKIYLLGADHHGYIGRLKAIAACAGDDPARNIEVLIGQM 366 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V + +G ++SKRAG+ + LR +++ +G+D++R+ + L + ++++ S + Sbjct: 367 VSV--NGA--RLSKRAGNIVELRDLLNWLGADALRYSLGRSPADSPLALEPEQLQKASND 422 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 NPVFYVQYA+AR +++ R A+ +D F +++ +E + L+ L +P V Sbjct: 423 NPVFYVQYAHARTKAVDRNAE--AAGVDRSAFEASLLTHPTESN-----LLAQLGAFPSV 475 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 + A +EP+++A +L +A +H + R P F L RL L A Sbjct: 476 VAEAAKFREPHRVARHLEVVAGTYHRWYDACRVTP---FAGEEITDLNRTRLWLNDATGQ 532 Query: 569 IINSGLNIIGVESPNEM 585 ++ +GL+++GV +P M Sbjct: 533 VLANGLDLLGVSAPERM 549 >gi|262374635|ref|ZP_06067908.1| arginyl-tRNA synthetase [Acinetobacter junii SH205] gi|262310425|gb|EEY91516.1| arginyl-tRNA synthetase [Acinetobacter junii SH205] Length = 599 Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 193/596 (32%), Positives = 308/596 (51%), Gaps = 72/596 (12%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 + R +D +HG ++N AMI S+ G+ P +AE I+A + D+ IAG GFIN +L Sbjct: 32 LTRTKDRSHGDFASNIAMIGSKAAGMKPRDLAEKILAALPEVADISKAEIAGPGFINFFL 91 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + +L I +YGR+ + K+ +EFVSANPT +HVGH R A G T+A+L Sbjct: 92 NADQRFAVLDQIQAQKDQYGRSQVNAAKKIQVEFVSANPTSSLHVGHGRGAAYGMTVANL 151 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + +G +V REYY+NDAG Q++ LA S + RY + L P+ Y G Y+K + + + Sbjct: 152 LEATGAKVDREYYVNDAGRQMDILATSTYLRYLE-LTGQILVFPKNAYQGDYVKEIAQSI 210 Query: 214 ADK---------------------YSSEL--------LNFPEEKWLP------------- 231 DK Y+ EL L+ +EK + Sbjct: 211 IDKDGDAHVRPVADIYKDVPEDVQYAEELDADGNKVVLSGDKEKHIDGLIANSQQHLGEG 270 Query: 232 --IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 + ++ A++ I+DDL + D + SE I + + L ++G++YE Sbjct: 271 YRVFHQAALHAILDDIKDDLADFGVTFDQWFSEASL----ADKIDEALATLDQRGFLYE- 325 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349 + F+ST GD+ DR + + +G TYFA+D+AY K +RG+ Sbjct: 326 ---------------KDGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGY 370 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 ++I + GSDH GY+ R++A A+ ++ VLL + V L+R G ++MS R+G F+T Sbjct: 371 TDLIDIWGSDHHGYISRVKAAIDAMGYDSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVT 430 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 LR + EVG+D+ RF + RK+ + +DFD QSK+N V+Y+QYA+AR SI +AK Sbjct: 431 LRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARVNSIVNRAK 490 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 + + FD +T E +++ LA YP ++ A EP+++ YL DLA Sbjct: 491 E--KGIVFDATNARQFADLLTLET-ETEILAKLAAYPEIVVRAANVCEPHQIGNYLKDLA 547 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++FHG ++ ++FV N L+ RL L V ++ +GL ++GV +P+ M Sbjct: 548 ALFHGWYAQ----DGVKFVDETNTSLSQARLLLSTNVQQVLRNGLELLGVSAPDSM 599 >gi|167736849|ref|ZP_02409623.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 14] Length = 594 Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 199/591 (33%), Positives = 310/591 (52%), Gaps = 62/591 (10%) Query: 28 ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFI 83 +L I +ERP+ AHG ++ N A+ L++PLG +P +AE IVA + P+ VD+ I Sbjct: 33 VLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQLAEQIVAALTAQPEAAGLVDAAEI 92 Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143 AG GFINL L+P+ + ++ +++ G +G + G +V +EFVSANPTGP+HVGH R Sbjct: 93 AGPGFINLRLTPASKQAVIGAVLAQGRAFGASERDHGKRVLLEFVSANPTGPLHVGHGRQ 152 Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203 A +GD LA+++A GY V RE+Y NDAG QI LA+S R + L D+ PE Y G Sbjct: 153 AALGDALANVLASQGYAVHREFYYNDAGVQIGNLAISTQAR-ARGLKPGDAGWPEAAYNG 211 Query: 204 VYLKHV------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257 Y+ + G+ +A + + + L ++ ++V + + DLKA ++ D Sbjct: 212 EYIADIARDYLNGETVAASDGEPVTGKRDVEDLEAIRKFAVTYLRREQDMDLKAFGVKFD 271 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 + E + + +D L G YE L R+T G Sbjct: 272 QYYLESSLY--TEGRVEKTVDALIAAGMTYE----------------QEGALWLRTTDEG 313 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VS 375 DD DR + K+DG+YTYF D+AY K+ERGF +I + GSDH G + R+ A + Sbjct: 314 DDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVINIQGSDHHGTIARVRAGLQGLHIG 373 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV-----------------DEV- 417 K + +L ++V + RDG +K+SKRAG ++T+R ++ DE Sbjct: 374 IPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVRDLIEWSGGATPGSEGSPELLDEAT 433 Query: 418 ---GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 G D+VRF ++ RK FD +Q+ ENPV+YVQYA+AR S+ + K + Sbjct: 434 ITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYVQYAHARICSVINEWKSRYGA 493 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 D L ++ P +S+ + L+ LAEYP V+ +A P+ +AFYL +LAS FH Sbjct: 494 TDALLPGADLSPLDSK---QAMALMQKLAEYPDVLAHAAGELAPHAVAFYLRELASEFHS 550 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ R V + + R+ L+ A ++ +GL ++GV +P++M Sbjct: 551 FYNAER-------VLVDEQAPRTARVALLAATRQVLENGLAMLGVSAPSKM 594 >gi|94500579|ref|ZP_01307110.1| arginyl-tRNA synthetase [Oceanobacter sp. RED65] gi|94427369|gb|EAT12348.1| arginyl-tRNA synthetase [Oceanobacter sp. RED65] Length = 607 Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 191/565 (33%), Positives = 308/565 (54%), Gaps = 42/565 (7%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 +I+++ +D AHG ++N AM+ S+ G++P AE IV + P + IAG GFIN Sbjct: 75 KIMVDNTKDKAHGDYASNIAMVSSKMAGMNPRQWAEEIVNALPDSPILKQAEIAGPGFIN 134 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +++ + ++ +I+ + +G N GKG V +EFVSANPTGP+HVGH R A VGD + Sbjct: 135 FFVTEAASFSVVETILDAKETFGHNDSGKGQSVQVEFVSANPTGPLHVGHGRGAAVGDCI 194 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + L+ +G++VTRE+Y NDAGAQI+ LALSV R + L +D+ PE Y G Y+ + Sbjct: 195 SRLLEANGWKVTREFYYNDAGAQIDNLALSVQARC-KGLTPDDAGWPEDGYRGEYILDLA 253 Query: 211 KEL--ADKYSSELLNFPEEK---WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 D S +F K L ++ ++V + + DLKA + D++ E Sbjct: 254 NSFMNGDTIESADQSFTGTKDADDLEGIRHFAVAYLRREQDLDLKAFEVDFDVYFLESSL 313 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 + + + + NL + GY YE D L ++T GDD DR + Sbjct: 314 YA--DGKVEETVQNLIKNGYTYE----------------DGGALWLKTTEFGDDKDRVMR 355 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR----LEAVAAAVSEKKAQI 381 K DG YTYF D+AY + K++RGF +I G+DH + R L+A+ A + E Sbjct: 356 KKDGGYTYFVPDVAYHQNKWQRGFKKVINEQGADHHSTITRVRAGLQALQAGIPE--GYP 413 Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441 + +L ++V + + G +K+SKRAG ++TLR ++DEVG D+ R+ + R S L FD Sbjct: 414 DYVLHQMVTVMKGGEEVKISKRAGSYVTLRDLIDEVGRDATRYFLAARAPSSQLTFDIDL 473 Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501 + QS +NPV+Y+QYA+AR SI R+ + D N + + + + +L+ + Sbjct: 474 ARSQSNDNPVYYIQYAHARICSILRKLESEGQSWD----QHNGLSKLDRLEEDQEKLLAN 529 Query: 502 -LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 LA +P V+ A P+++A YL++LAS FHG++++ + ++ L R+ Sbjct: 530 KLARFPEVVAIAGEQSAPHQVANYLHELASDFHGYYNNHK-------TIVEDQDLRDARI 582 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 L AV ++ +GL ++G+ +P EM Sbjct: 583 ALTQAVRQVLFNGLYLLGIAAPEEM 607 >gi|53718023|ref|YP_107009.1| arginyl-tRNA synthetase [Burkholderia pseudomallei K96243] gi|126438772|ref|YP_001057463.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 668] gi|126452586|ref|YP_001064713.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 1106a] gi|134279771|ref|ZP_01766483.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 305] gi|167717831|ref|ZP_02401067.1| arginyl-tRNA synthetase [Burkholderia pseudomallei DM98] gi|167813955|ref|ZP_02445635.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 91] gi|167822473|ref|ZP_02453944.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 9] gi|167909276|ref|ZP_02496367.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 112] gi|226200340|ref|ZP_03795884.1| arginine--tRNA ligase [Burkholderia pseudomallei Pakistan 9] gi|237810613|ref|YP_002895064.1| arginine--tRNA ligase [Burkholderia pseudomallei MSHR346] gi|242315778|ref|ZP_04814794.1| arginine--tRNA ligase [Burkholderia pseudomallei 1106b] gi|254182011|ref|ZP_04888608.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 1655] gi|81380564|sp|Q63Y06|SYR_BURPS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|166232767|sp|A3NQU2|SYR_BURP0 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|166232768|sp|A3N542|SYR_BURP6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|52208437|emb|CAH34371.1| putative arginyl-tRNA synthetase [Burkholderia pseudomallei K96243] gi|126218265|gb|ABN81771.1| arginine--tRNA ligase [Burkholderia pseudomallei 668] gi|126226228|gb|ABN89768.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 1106a] gi|134248971|gb|EBA49053.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 305] gi|184212549|gb|EDU09592.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 1655] gi|225927662|gb|EEH23705.1| arginine--tRNA ligase [Burkholderia pseudomallei Pakistan 9] gi|237503627|gb|ACQ95945.1| arginine--tRNA ligase [Burkholderia pseudomallei MSHR346] gi|242139017|gb|EES25419.1| arginine--tRNA ligase [Burkholderia pseudomallei 1106b] Length = 594 Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 203/611 (33%), Positives = 319/611 (52%), Gaps = 65/611 (10%) Query: 11 LKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 L+N +K++ K + +L I +ERP+ AHG ++ N A+ L++PLG +P +AE Sbjct: 13 LENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQLAEQ 72 Query: 68 IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 IVA + P+ VD+ IAG GFINL L+P+ + ++ +++ G +G + G +V Sbjct: 73 IVAALTAQPEAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVLAQGRAFGASERDHGKRV 132 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA+S Sbjct: 133 LLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAISTQA 192 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPIVKDYS 237 R + L D+ PE Y G Y+ + G+ +A + + + L ++ ++ Sbjct: 193 R-ARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRDVEDLEAIRKFA 251 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 V + + DLKA ++ D + E + + +D L G YE Sbjct: 252 VTYLRREQDMDLKAFGVKFDQYYLESSLY--TEGRVEKTVDALIAAGMTYE--------- 300 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 L R+T GDD DR + K+DG+YTYF D+AY K+ERGF +I + G Sbjct: 301 -------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVINIQG 353 Query: 358 SDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV- 414 SDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+R ++ Sbjct: 354 SDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVRDLIE 413 Query: 415 ----------------DEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454 DE G D+VRF ++ RK FD +Q+ ENPV+YV Sbjct: 414 WSGGATPGSEGSPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYV 473 Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514 QYA+AR S+ + K + D L ++ P +S+ + L+ LAEYP V+ +A Sbjct: 474 QYAHARICSVINEWKSRYGATDALLPGADLSPLDSK---QAMALMQKLAEYPDVLAHAAG 530 Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 P+ +AFYL +LAS FH ++ R V + + R+ L+ A ++ +GL Sbjct: 531 ELAPHAVAFYLRELASEFHSFYNAER-------VLVDEQAPRTARVALLAATRQVLENGL 583 Query: 575 NIIGVESPNEM 585 ++GV +P++M Sbjct: 584 AMLGVSAPSKM 594 >gi|111018491|ref|YP_701463.1| arginyl-tRNA synthetase [Rhodococcus jostii RHA1] gi|123145255|sp|Q0SGN1|SYR_RHOSR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|110818021|gb|ABG93305.1| arginine--tRNA ligase [Rhodococcus jostii RHA1] Length = 550 Score = 318 bits (816), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 191/587 (32%), Positives = 304/587 (51%), Gaps = 46/587 (7%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + L+ ++ + ++ +L + + +ERPR+ HG +TN AM +++ +G +P Sbjct: 4 ADLAELLRGTAAKVLDERGLDVSVLPETLTVERPRNPEHGDYATNVAMQVAKKVGTNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + +DS IAG GF+N+ L+ I++ I+ G +G G ++ Sbjct: 64 LAGWLAEALTAAEGIDSADIAGPGFLNIRLAADAQGAIVAKILDEGAAFGSGHTLDGKRI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L +++ G VTREYY ND GAQI+ + S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRILSTQGAAVTREYYFNDHGAQIDRFSRSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + ++ + ++L P + + + V M Sbjct: 184 AAKG------EPAPEDGYAGAYIADIAAQVQSQ-RPDVLELPAGEQQEVFRAIGVDLMFA 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L + D++ E+ + + ++ L G +++ Sbjct: 237 HIKRTLHEFGVDFDVYFHENSLF--ESGAVEKAVETLKDSGNLFQ--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 + +ST GDD DR ++KSDG+ Y A D+AYF+ K RGFD IY++G+DH GY Sbjct: 280 -EDGAWWLKSTDFGDDKDRVVIKSDGNAAYIAGDIAYFQDKRSRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA + + VL+ ++V L RDG+ +KMSKRAG ITL +V+ +G D+ R Sbjct: 339 IGRLKAAAAAFGDDPDTVEVLIGQMVNLVRDGVAVKMSKRAGTVITLDDLVEAIGVDASR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLF 480 + M+ +D D ENPV+YVQYA+AR +I R A D+ D DF L Sbjct: 399 YAMIRSSVDSSIDIDLELWTSTGNENPVYYVQYAHARLSAIARNAADLGIAVADPDFSLL 458 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 V QE + LI L EYPRV+ +A +EP+++A YL +LA +H + R Sbjct: 459 ---VSEQEGD-------LIRTLGEYPRVVTSAANLREPHRIARYLEELAGAYHRFYGACR 508 Query: 541 ENPRLRFVQANNR--KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P Q + L + RL L A ++++GL ++GV +P +M Sbjct: 509 ILP-----QGDEEVGPLHIARLALCDASRQVLSNGLALLGVSAPEQM 550 >gi|269219842|ref|ZP_06163696.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332] gi|269210747|gb|EEZ77087.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332] Length = 558 Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 195/574 (33%), Positives = 298/574 (51%), Gaps = 42/574 (7%) Query: 19 DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV 78 D + +E + L + +ERPR HG +TN AM L+R G +P + EL+ ARI V Sbjct: 20 DGTLTIEGE-LPVVKVERPRSREHGDWATNVAMQLARRAGRNPRELGELLAARIAAHDGV 78 Query: 79 DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138 + +AG GF+N+ LS + + ++ ++V +G YGR G VN+E+VSANPTGP+H+ Sbjct: 79 EEAEVAGPGFVNIRLSAASVGELARAVVEAGGSYGRTEGDAGKTVNLEYVSANPTGPLHI 138 Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198 G R A VGD+LA ++ FSG +V +EYY ND G QI+ A S+ R + D+PE Sbjct: 139 GGARWAAVGDSLARILEFSGAKVVKEYYFNDHGNQIDRFAASLLARAR------GEDVPE 192 Query: 199 GYYPGVYLKHVGKE-LADKYSS---ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254 Y G Y+ + + +AD + + +E+ + V+ M I+ L Sbjct: 193 DGYGGQYVTEIAERVVADSIADGEPDPRELSDEQAHEAFRSRGVELMFAEIKSSLHDFRS 252 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 D+F ED H + + I+ L +G VYE K C D Sbjct: 253 DFDVFFHEDSLH--ESGAVSKAIERLRERGVVYE------KEGALWLCTTD--------- 295 Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374 GDD DR ++KSDG YFA DLAY+ K RG DN +Y++G+DH GY+ R+ A+A A Sbjct: 296 -FGDDKDRVIVKSDGEAAYFAGDLAYYLDKRARGADNCVYMLGADHHGYIGRMYAMARAY 354 Query: 375 SEKKA---QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431 + + +L+ +LV L R G+P++MSKRAG +TL +VD VG D+ R+ ++ Sbjct: 355 GDTAGPGENMEILIGQLVNLVRSGVPVRMSKRAGTVVTLEDLVDAVGVDAARYSLVRASV 414 Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491 LD D V ++ +NPV+YVQYA+AR S+ A + P Sbjct: 415 DTTLDLDLDLVASRTNDNPVYYVQYAHARTCSVASNAASHGVRREDGFAP-------GLL 467 Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551 D + +L+ LA +P V + I +EP+++A YL ++A+ +H + R PR A+ Sbjct: 468 DAVDSELLGTLARFPDVAAQSAILREPHRVARYLEEVAAAYHTWYGKARVTPRAEEEVAD 527 Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L RL + A ++ +GL ++GV +P M Sbjct: 528 ---LHRTRLWVNDAAGVVLANGLGLLGVSAPERM 558 >gi|119896671|ref|YP_931884.1| arginyl-tRNA synthetase [Azoarcus sp. BH72] gi|166232755|sp|A1K2E2|SYR_AZOSB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|119669084|emb|CAL92997.1| putative arginine-tRNA ligase [Azoarcus sp. BH72] Length = 587 Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 200/593 (33%), Positives = 307/593 (51%), Gaps = 73/593 (12%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I++ERP+ +HG +TN A+ L++PL +P +A L++A + V +AG GFIN Sbjct: 29 ILLERPKQASHGDFATNVALQLAKPLKRNPRELAALLLAELPASNLVAKTEVAGAGFINF 88 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+ + ++ ++ G ++GR K KV +EFVSANPTGP+HVGH R A G +L+ Sbjct: 89 TLAAAAKTAVVGEVLAKGADFGRG-AKKNVKVQVEFVSANPTGPLHVGHGRGAAYGASLS 147 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ F+GY+VTREYY+NDAG Q++ LALS + RY AL+ D P Y G Y+ + + Sbjct: 148 DVLCFAGYDVTREYYVNDAGRQMDILALSTWLRYL-ALFGIDVPFPPNAYQGDYVIDMAR 206 Query: 212 ELADKYSSELLNFPEEKWL---------------------------------------PI 232 L D + + L P Sbjct: 207 GLRDAHQGRYAGVTLAQVLEGTPGLPVAERKDDEAKQQRELHLDGLIANAKRLLGEDYPF 266 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 V +++ + RDDL+ + D + SE D + + L ++G++Y Sbjct: 267 VHGFALNEQLGDGRDDLQEFGVHFDKWFSEKSLF--DTGLVERAVAELEKRGHIY----- 319 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 + FRST GD+ DR + + +G YTYFA+D+AY KYERGFD + Sbjct: 320 -----------VQDGAKWFRSTDFGDEKDRVVQRENGLYTYFASDIAYHLNKYERGFDRI 368 Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412 I + G+DH GY+ R++ AA+ ++ V L + LYRDG MS R+G+F+TLR Sbjct: 369 IDIWGADHHGYIPRVKGAIAALGLPPEKLEVALVQFAVLYRDGQKTSMSTRSGEFVTLRE 428 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 + EVG+D+ RF + RK+ + LDFD K QS ENPV+Y+QYA+AR S+ Q + Sbjct: 429 LRREVGNDACRFFYVLRKSDQHLDFDLDLAKSQSNENPVYYIQYAHARVCSVLNQ----W 484 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 +L ++ E+E EL L LA +P V++ A P+++AFYL DLA+ F Sbjct: 485 GGEPAELQAADLGKLENE---RELALCARLAGFPEVVQGAAADYAPHQIAFYLKDLAADF 541 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H ++ R + ++ + + RL L AV S++ GL ++GV +P M Sbjct: 542 HSWYNAER-------MLVDDEAVKLARLALAAAVRSVLRGGLAVLGVSAPESM 587 >gi|254468228|ref|ZP_05081634.1| arginyl-tRNA synthetase [beta proteobacterium KB13] gi|207087038|gb|EDZ64321.1| arginyl-tRNA synthetase [beta proteobacterium KB13] Length = 552 Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 195/589 (33%), Positives = 318/589 (53%), Gaps = 51/589 (8%) Query: 9 SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68 +++ N L + ++ +E +D I IERP+ HG S+N A+ L++ + +P +A+LI Sbjct: 3 NQISNILSDALQQLNIEISEVD-IHIERPKTLEHGDYSSNIALQLAKGMKKNPREVAQLI 61 Query: 69 VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128 + ++ + + +AG GFIN +LS I+ I+ +YGRN G K+ +EFV Sbjct: 62 IDQVGSEQLFSKLELAGPGFINFHLSDIGRSLIIKEIIQKDDQYGRNTSGAKQKLQVEFV 121 Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188 SANPTGP+H+GH R A +GD+LA +M +G+EVTRE+Y NDAG QIN LALSV R + Sbjct: 122 SANPTGPLHIGHGRGAAIGDSLARIMDANGWEVTREFYYNDAGQQINNLALSVQSRL-KG 180 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKEL-------ADKYSSELLNFPEEKWLPIVKDYSVQAM 241 + D+D PE Y G Y+ + + D+ + ++ L +K +SV + Sbjct: 181 VTPEDADFPEDGYRGDYILEIAEAFKILSSITVDRETVTATGNVDD--LEAIKQFSVAFL 238 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 DL A D+F E F+ + + +++ L G+ Y+ K T Sbjct: 239 RNEQNIDLAAFQTHFDVFTLESSFYENE--AVHEVVQLLTDNGFAYK------KEDAT-- 288 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 R+T GDD DR ++KSDG YTYF D+AY K++RGF +I G+DH Sbjct: 289 --------WLRTTDFGDDKDRVMVKSDGGYTYFVPDVAYHLNKWQRGFVRVINEQGADHH 340 Query: 362 GYVKRLEAVAAAVSEKKAQ--INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 + R+ A + +K Q +L ++V + ++ +K+SKRAG ++TLR ++D+VG Sbjct: 341 STITRVRAGLQGLQKKIPQDWPEYVLHQMVTVTKNNQEVKISKRAGSYVTLRDLIDQVGC 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ RF ++ RK L FD Q+ ENPV+Y+QYA+AR ++ Q++ Sbjct: 401 DATRFFLIARKPDSQLVFDIDLATSQTNENPVYYIQYAHARICAVLNQSE---------- 450 Query: 480 FPRNVIPQESEFDTS---ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 ++ + Q +E S E QLI L+E+P +I A P+ +A +L DLA FH ++ Sbjct: 451 LGQDQLLQFNEVLLSTKHEHQLIKRLSEFPEIISLAAEESSPHYIATFLKDLAGDFHSYY 510 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +F+ +++ + RL L+ A +++ +GL ++GV +PN+M Sbjct: 511 NAN------KFL-IDDQNIKCARLALILATKNVLRNGLQLLGVSAPNKM 552 >gi|78222646|ref|YP_384393.1| arginyl-tRNA synthetase [Geobacter metallireducens GS-15] gi|78193901|gb|ABB31668.1| arginyl-tRNA synthetase [Geobacter metallireducens GS-15] Length = 569 Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 201/571 (35%), Positives = 302/571 (52%), Gaps = 55/571 (9%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK--IDPDVDSVFIAGKGFI 89 IVIE+P HG + AM +++ P IAE IV I+ + + IAG GFI Sbjct: 37 IVIEKPAHAEHGDFACTVAMSMAKAERKAPRVIAETIVKHIENGESGIIGGIDIAGPGFI 96 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N + + L+ + +G +GR+ G+ KV +EFVSANPTGP+H+GH R A +GDT Sbjct: 97 NFRIKNEAWSRTLAVVEAAGASFGRSCAGEERKVQVEFVSANPTGPLHIGHGRGAAIGDT 156 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 + L++ SG++VTRE+Y NDAGAQI LALSV R + D P Y G Y+K V Sbjct: 157 ICRLLSASGFDVTREFYYNDAGAQIANLALSVQSRC-LGIEPGDPRWPADGYQGDYIKDV 215 Query: 210 G-----KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 +E D + + L ++ ++V + + DL A ++ D++ E Sbjct: 216 ARSYLNRETVDAGDQHVTAAGDPNDLDAIRRFAVAYLRREQDQDLLAFDVHFDVYSLESS 275 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 + + +++ L G+ +E L R+T GDD DR + Sbjct: 276 LY--TEGRVEEVVRRLIENGHTFE----------------QDGALWLRTTDFGDDKDRVM 317 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR----LEAVAAAVSEKKAQ 380 KSDGSYTYF D+AY K+ERGF +I G+DH + R L+A+ A + ++ + Sbjct: 318 RKSDGSYTYFVPDVAYHLAKWERGFTRVINEQGADHHSTITRVRAGLQALNAGIPQEWPE 377 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 +L ++V + R G +K+SKRAG ++TLR ++DEVG D+ RF L RK L FD Sbjct: 378 Y--VLHQMVTVMRGGEEVKISKRAGSYVTLRDLIDEVGRDATRFFFLMRKPDSQLVFDID 435 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKD------IFPDLDFDLFPRNVIPQESEFDTS 494 K+QS ENPV+YVQYA+AR SIF A D FPD DL P+ Sbjct: 436 LAKQQSLENPVYYVQYAHARISSIFEAACDRGISVPSFPDAHVDLLE---TPE------- 485 Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554 E++LI + +P VIE + ++ EP+++ +YL +LA FH ++ R V ++ Sbjct: 486 EIELIKLIGSFPEVIEGSALSFEPHRITYYLQELAGAFHSFYNKNR-------VIGEGKE 538 Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L+ RL L+ VA ++ +GL ++GV +P +M Sbjct: 539 LSSARLFLLKGVAQVLKNGLALLGVSAPEKM 569 >gi|226226873|ref|YP_002760979.1| arginyl-tRNA synthetase [Gemmatimonas aurantiaca T-27] gi|226090064|dbj|BAH38509.1| arginyl-tRNA synthetase [Gemmatimonas aurantiaca T-27] Length = 561 Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 192/559 (34%), Positives = 303/559 (54%), Gaps = 41/559 (7%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFINL 91 V+ERPRD + G +TN AM L++PLG P +AE ++A + + + IAG GFIN Sbjct: 38 VLERPRDPSFGDWATNLAMTLAKPLGKKPRDLAEALIAALDTARVGISAAEIAGPGFINF 97 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P + + L I+ + ++GR+ IG+G +V +EFVSANPTGP+HVGH R A +GD ++ Sbjct: 98 RLDPGFQARGLLQILAAPEQWGRHNIGQGERVVVEFVSANPTGPLHVGHGRQAALGDAIS 157 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +L+ ++G+ V RE+Y NDAGAQI LA S R ++ + + ++PEG Y G Y+ + Sbjct: 158 TLLEWTGWNVDREFYYNDAGAQIANLAKSTQARVRE-IGGAELEIPEGGYHGEYI----R 212 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 E+A++Y ++ E K L +++++V A+ DL+A ++ D + E + Sbjct: 213 EIAERYVAQHAVDAEGKDLEAMREFAVAALRHEQDLDLQAFGVKFDTYYLESSLY--TDG 270 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD--- 328 + ++ L + GY +E D L R+T GDD DR + KS+ Sbjct: 271 RVDKTVEALKQSGYTFE----------------DNGALFLRTTAFGDDKDRVMKKSEAKG 314 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLLC 386 G YTYF D+AY K+ERG+ I V G+DH R+ A A + + + +L Sbjct: 315 GDYTYFVPDVAYHVTKWERGYHRAINVQGADHHSTTTRVRAGLQALGIGIPQGYPDYVLH 374 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446 ++V + + G +K+SKRAG ++T+R ++DEVG D+VR+ L RK L FD + QS Sbjct: 375 QMVTVMKGGEEVKISKRAGSYVTVRDLIDEVGRDAVRYFYLMRKGDSQLVFDVDLARSQS 434 Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 +ENPV+YVQ A+AR IFR + + + V+ + +E +LI L ++P Sbjct: 435 EENPVYYVQMAHARMCGIFRVGEIDATGVTAEGVDLGVLSE-----PAEQELIKQLLDFP 489 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 +++ A EP+++A +L + A H W H V +T RL L A Sbjct: 490 AIVKGAADNLEPHRIAGWLLETARAAH-TWYH------KHHVLGEPEAITRARLVLARAT 542 Query: 567 ASIINSGLNIIGVESPNEM 585 I +GL I+G+ +P M Sbjct: 543 QLGIAAGLRILGLTAPERM 561 >gi|120405304|ref|YP_955133.1| arginyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1] gi|166232813|sp|A1TD77|SYR_MYCVP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|119958122|gb|ABM15127.1| arginyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1] Length = 550 Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 197/585 (33%), Positives = 294/585 (50%), Gaps = 42/585 (7%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LK + + ++ L IV +ERPR+ HG +TN A+ L + +G +P Sbjct: 4 ADLAELLKATAAAVLAEHGLDSAALPAIVTVERPRNPEHGDYATNLALQLGKKVGANPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + A + + + +AG GF+NL + S I+ ++ +G YG + G +V Sbjct: 64 LAGWLAAALVAKDGIAAADVAGPGFVNLRIEASAQNVIVGDVIAAGATYGASGELDGRRV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L++ G EV REYY ND GAQI+ S+ Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGAEVVREYYFNDHGAQIDRFTNSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + ++ K L P+ + + V M Sbjct: 184 AAKG------EPAPEDGYAGTYIADIAAQVLAKEPGAL-ELPDAEMRETFRAVGVNLMFD 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I++ L D++ ED H + I L G +YE Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMHT--SGRVDQAIAKLRETGSIYE--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 + R+T GDD DR ++KSDG Y A DLAYF K +RGFD IY++G+DH GY Sbjct: 280 -KDGAVWLRTTDFGDDKDRVVIKSDGQPAYIAGDLAYFLDKRKRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA+ + + VL+ ++V L RDG P++MSKRAG ITL +VD +G D+ R Sbjct: 339 IARLKAAAAALGDDPDTVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVDAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD---FDLF 480 + ++ +D D S ENPV+YVQYA+AR ++ R A ++ D DL Sbjct: 399 YALIRSSVDTPIDIDLALWSSASNENPVYYVQYAHARLSALARNAAELGVAADTAHLDLL 458 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 + E LI ++ E+PRV++ A +EP++++ YL DLA +H + R Sbjct: 459 THD----------KEGTLIRNIGEFPRVLKTAASLREPHRVSRYLEDLAGDYHRFYDSCR 508 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P+ + L RL L A +I +GL I+GV +P M Sbjct: 509 VLPQGDETPGD---LHAARLALCAATRQVIANGLGILGVSAPERM 550 >gi|291530393|emb|CBK95978.1| arginyl-tRNA synthetase [Eubacterium siraeum 70/3] Length = 584 Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 192/598 (32%), Positives = 307/598 (51%), Gaps = 56/598 (9%) Query: 13 NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72 N L + + K+E L +ERP D +HG S NAAM ++ L +P I ++I Sbjct: 18 NALGRLVAEGKIEAVPLPAFNVERPADVSHGDFSCNAAMASAKALRNNPRAIGQMIADAA 77 Query: 73 KIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131 +D V + + +AG GF+N ++SP + + + ++ SG +YG+ +GKG +V +EFVSAN Sbjct: 78 VLDGTVFEKIEVAGPGFLNFFISPLWFNETVGEVISSGSDYGKTELGKGKRVLVEFVSAN 137 Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 PTGPMH+G+ R +GD+L+S++ F+GYEV RE+Y+NDAG QI S+ RY Q Sbjct: 138 PTGPMHIGNARGGALGDSLSSVLQFAGYEVEREFYVNDAGNQIEKFGKSLSIRYMQIADG 197 Query: 192 NDSD----------------------LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229 N SD +PE Y GV + + +N EE Sbjct: 198 NKSDVIASYGDDDVCRKIFEDEENFPMPEDVYKGVDIIEHAYNFYKINGDKFVNADEESR 257 Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 + +Y++ + + DL I +D + E H+ ++ I+D L +G YE Sbjct: 258 KSALVEYALPLNIDGLEKDLAKYRIVYDTWFRESSLHKS--GAVKQIVDMLTEKGQTYE- 314 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERG 348 + F+++ GDD DR L++++G TYF D+AY K RG Sbjct: 315 ---------------KDGAIWFKASDFGDDQDRVLVRANGIPTYFVPDIAYHYNKLVTRG 359 Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 FD I ++G+DH GY+ R++A A+ +++++++ ++V L R+G +K+SKR+G I Sbjct: 360 FDKAIDILGADHHGYIARMKAALTALGVDASKLDIVIMQMVMLVRNGETVKLSKRSGKAI 419 Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 TL ++DEV D+ RF R + L+FD E+S NPVFYVQYA+AR SI R+ Sbjct: 420 TLSTLLDEVPIDAARFFFNLRDPNTHLEFDLELAIEESSNNPVFYVQYAHARICSILRRM 479 Query: 469 KDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 ++ N+ E F+ +EL LI H+A P I A P K+ YL D Sbjct: 480 EEEGTGYS------NIPVSELNFNHPAELALIRHIAALPNCINEAAKDYNPSKITKYLCD 533 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA +FH + + + ++ + RL L A ++ + L+++ V++P +M Sbjct: 534 LAQLFHKFYDNCK-------IKGEEENILQSRLSLCVATKTVFKNLLDLLKVDAPEKM 584 >gi|108804495|ref|YP_644432.1| arginyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941] gi|108765738|gb|ABG04620.1| arginyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941] Length = 543 Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 193/559 (34%), Positives = 300/559 (53%), Gaps = 40/559 (7%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 LD + +ERP D HG +TN A+ +R +P +AE + R++ P V V +AG GF Sbjct: 23 LDGVHVERPNDPRHGDFATNVALANARTFRRNPRQVAEELAGRLRA-PFVREVEVAGPGF 81 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 IN L+P + + + +IV G YGR + G +N+EFVSANPTGP+HV H R A GD Sbjct: 82 INFRLAPEAVWEEIGAIVREGTGYGR-VPPSGDPINVEFVSANPTGPLHVAHGRHAAYGD 140 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL--PEGYYPGVYL 206 LA ++ +G V+REYY ND G QI SV RY + LY + P+ Y G Y Sbjct: 141 ALARILEAAGRRVSREYYFNDGGNQIRLFGESVADRYAR-LYGRAWPVSDPDALYKGDYT 199 Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 + + ++L++ + + LL E+ L I+ D++ + M+ I+ L+ + D + +E + Sbjct: 200 EEIARDLSEAHGASLLEMEPEEALRIIGDFAARWCMEDIKRTLERARVGFDTYFNEKSLY 259 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 + +++ I+ L G YE L S+ GDD DR L+K Sbjct: 260 --ESGAVQETIERLREAGCAYE----------------KDGALWLASSRFGDDKDRVLVK 301 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386 SDGSYTY A D+AY K+ RGF I ++G+DH+GY RL A A+ + ++V L Sbjct: 302 SDGSYTYVAPDIAYHLDKWSRGFRRAINILGADHAGYGTRLRAGLVALGLPEDFLDVELV 361 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446 LV+L R+G +K SKRAG+ +T ++DEVG D R+ + + ++FD QS Sbjct: 362 RLVKLLREGRQVKFSKRAGNIVTFDELLDEVGVDVARYFYVRSSHRNEMNFDLDLAIRQS 421 Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 +ENPV+YVQYA+AR SIFR+A + + ++ P + P+E L + L ++P Sbjct: 422 EENPVYYVQYAHARICSIFRRAGE---EAGEEVPPGELAPEER-------LLALELIDFP 471 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 RV+ A +E + + +L +A+ FH ++ R V + ++ RL L A Sbjct: 472 RVVRGAADRREVHPVPAHLETVATRFHQFYTVHR-------VLVEDGEVRARRLALCAAT 524 Query: 567 ASIINSGLNIIGVESPNEM 585 +I+ +GL ++GV +P M Sbjct: 525 RNILAAGLGLLGVRAPERM 543 >gi|109894994|sp|Q39VQ6|SYR_GEOMG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS Length = 562 Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 201/569 (35%), Positives = 299/569 (52%), Gaps = 51/569 (8%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK--IDPDVDSVFIAGKGFI 89 IVIE+P HG + AM +++ P IAE IV I+ + + IAG GFI Sbjct: 30 IVIEKPAHAEHGDFACTVAMSMAKAERKAPRVIAETIVKHIENGESGIIGGIDIAGPGFI 89 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N + + L+ + +G +GR+ G+ KV +EFVSANPTGP+H+GH R A +GDT Sbjct: 90 NFRIKNEAWSRTLAVVEAAGASFGRSCAGEERKVQVEFVSANPTGPLHIGHGRGAAIGDT 149 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 + L++ SG++VTRE+Y NDAGAQI LALSV R + D P Y G Y+K V Sbjct: 150 ICRLLSASGFDVTREFYYNDAGAQIANLALSVQSRC-LGIEPGDPRWPADGYQGDYIKDV 208 Query: 210 G-----KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 +E D + + L ++ ++V + + DL A ++ D++ E Sbjct: 209 ARSYLNRETVDAGDQHVTAAGDPNDLDAIRRFAVAYLRREQDQDLLAFDVHFDVYSLESS 268 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 + + +++ L G+ +E L R+T GDD DR + Sbjct: 269 LY--TEGRVEEVVRRLIENGHTFE----------------QDGALWLRTTDFGDDKDRVM 310 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ--IN 382 KSDGSYTYF D+AY K+ERGF +I G+DH + R+ A A++ Q Sbjct: 311 RKSDGSYTYFVPDVAYHLAKWERGFTRVINEQGADHHSTITRVRAGLQALNAGIPQEWPE 370 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 +L ++V + R G +K+SKRAG ++TLR ++DEVG D+ RF L RK L FD Sbjct: 371 YVLHQMVTVMRGGEEVKISKRAGSYVTLRDLIDEVGRDATRFFFLMRKPDSQLVFDIDLA 430 Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKD------IFPDLDFDLFPRNVIPQESEFDTSEL 496 K+QS ENPV+YVQYA+AR SIF A D FPD DL P+ E+ Sbjct: 431 KQQSLENPVYYVQYAHARISSIFEAACDRGISVPSFPDAHVDLLE---TPE-------EI 480 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +LI + +P VIE + ++ EP+++ +YL +LA FH ++ R V ++L+ Sbjct: 481 ELIKLIGSFPEVIEGSALSFEPHRITYYLQELAGAFHSFYNKNR-------VIGEGKELS 533 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L+ VA ++ +GL ++GV +P +M Sbjct: 534 SARLFLLKGVAQVLKNGLALLGVSAPEKM 562 >gi|313902824|ref|ZP_07836221.1| arginyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965] gi|313466944|gb|EFR62461.1| arginyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965] Length = 566 Score = 318 bits (814), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 194/557 (34%), Positives = 296/557 (53%), Gaps = 37/557 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + +E PRD HG ++NAA++L+ P +A ++ + + V AG GF+N Sbjct: 44 VQVEVPRDPRHGDFASNAALVLAGRARRAPREVAAVLERHLPGGAWLRKVEAAGPGFLNF 103 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +L+ + R+ + +I+ +G +GR G G +V +EFVSANPTGP+ V + R A +GD LA Sbjct: 104 HLADDWWREGVRAILRAGEAFGRTDRGGGLRVQVEFVSANPTGPLGVVNARAAALGDALA 163 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ +GY V +E+Y+NDAG QI LALS+ R +Q L +++PEG YPG YL + + Sbjct: 164 RVLQAAGYRVEKEFYLNDAGNQIRKLALSLEARMRQEL-GQPAEIPEGGYPGEYLIDIAR 222 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 +L LL+ PEE+ + ++V+A++ +R L ++ D + E R Sbjct: 223 DLLAAEGPALLDRPEEERWERMARFAVEAIVAQMRTQLARFGVEFDEWYPETRV-REAGY 281 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 P R +++ L ++G VYE L RS+ VGDD DR L++ DG Y Sbjct: 282 PER-VLERLRQRGMVYE----------------QDGALWLRSSAVGDDKDRVLVRRDGEY 324 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 TY D+AY K+ERGF I + G DH G+V ++A A+ VLL ++V L Sbjct: 325 TYTLVDIAYHLTKWERGFQRAIDIWGQDHHGHVVPMQAALRALGLPDGWFEVLLTQMVHL 384 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 R G ++MSKR G+ +T+ +DEV D+ R+ L R LDFD +S ENPV Sbjct: 385 VRGGQAVRMSKRRGELVTMAEFLDEVDVDAARYFFLMRSPDTHLDFDLDLANLRSSENPV 444 Query: 452 FYVQYAYARCRSIFRQAK---DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 +YVQYA+AR I RQA+ + PD DL P D +E L L + P Sbjct: 445 YYVQYAHARACGILRQAEAEAGLRPDGSADLSPLG--------DPAERDLARRLLDLPGE 496 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 + A A+EP++L +YL D+A++FH ++ R V + RL LV A Sbjct: 497 VAAAAEAREPHRLTYYLKDVATLFHQFYTRCR-------VLGEEDPVARARLVLVDATRQ 549 Query: 569 IINSGLNIIGVESPNEM 585 ++ + L ++GV +P M Sbjct: 550 VLATALGLLGVTAPERM 566 >gi|289671095|ref|ZP_06492170.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 566 Score = 317 bits (813), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 195/565 (34%), Positives = 306/565 (54%), Gaps = 42/565 (7%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLT----IAELIVARIKIDPDVDSVFIAGKGF 88 V+ERP+ HG +TNAAM+L++ +P + +A+ ++A + DV V IAG GF Sbjct: 32 VVERPKTREHGDFATNAAMLLAKAARSNPRSNPRVLAQALLAALPASDDVAKVDIAGPGF 91 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 IN +L+P+ ++ ++ ++ G +YGR L G G V +E+VSANPTGP+HVGH R A +GD Sbjct: 92 INFHLAPTAYQREVAHVIKQGHDYGRGLAGNGRSVGVEYVSANPTGPLHVGHGRAAAIGD 151 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 +LA ++ +G+ V RE+Y NDAG QI LALSV R Q L + + PE Y G Y+ Sbjct: 152 SLARVLDANGWNVKREFYYNDAGVQIENLALSVQAR-AQGLTPDSAGWPENGYRGDYIAD 210 Query: 209 VGK-----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 V + D + + L ++ ++V + DL A + DI+ E Sbjct: 211 VANAYLAGDTVDLEGHLVTGTKDPADLESIRRFAVAYLRNEQNHDLAAFRVDFDIYFLES 270 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323 ++ + + + L G+ YE + L +ST GDD DR Sbjct: 271 SLYK--DGKVEEAVQQLIASGHTYE----------------EGGALWLKSTDFGDDKDRV 312 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQI 381 + KSDG+YTYF D+AY K++RG++ I +G+DH G + R+ A A + + Sbjct: 313 MRKSDGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSLTRVRAGLQAMELGIPQGWP 372 Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441 +L ++V + R G +K+SKRAG ++TLR +++E +D+VR+ ++ RK L FD Sbjct: 373 EYVLHQMVTVMRGGEEVKLSKRAGSYVTLRDLIEETSADAVRWFLIARKPDSQLTFDIDL 432 Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE-LQLIV 500 + QS +NPVFYVQYA+AR S+ RQA++ D + + + + D L +++ Sbjct: 433 ARAQSNDNPVFYVQYAHARVCSVLRQAQEKGYKYD----QTHGLAELAHLDDEHSLAVML 488 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 L+ YP V+E A A EPY++A YL +LA FH W H N ++ A R +L Sbjct: 489 ELSRYPEVVEIAGQALEPYQIAQYLRELAHAFHT-WYH---NSKVLVDDAAERD---AKL 541 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 L A ++ +GL ++GV +P +M Sbjct: 542 TLAVATQQVLANGLELLGVSAPEKM 566 >gi|71909477|ref|YP_287064.1| arginyl-tRNA synthetase [Dechloromonas aromatica RCB] gi|109894985|sp|Q478Y7|SYR_DECAR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|71849098|gb|AAZ48594.1| arginyl-tRNA synthetase [Dechloromonas aromatica RCB] Length = 587 Score = 317 bits (812), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 203/600 (33%), Positives = 308/600 (51%), Gaps = 87/600 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +ERPRD HG +TN AM L++ L +P IA ++A + V +AG GFIN Sbjct: 29 IHLERPRDPTHGDFATNLAMQLAKALKKNPREIANQLLAELPPSRLVTKAEVAGAGFINF 88 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + ++ +++ G +GR+ G KV +EFVSANPTGP+HVGH R A G +L+ Sbjct: 89 TLDAGFKTDVVKAVLAEGDNFGRSNQGGWQKVQVEFVSANPTGPLHVGHGRGAAYGASLS 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHV 209 SL+ F+G++VTREYY+NDAG Q++ L LS + RY L + D+P Y G Y++ + Sbjct: 149 SLLTFAGWDVTREYYVNDAGRQMDILGLSTWLRY---LEQHGVDVPFLPNAYQGDYVRDM 205 Query: 210 GKEL----ADKY---SSELL----NFPEEK----------------------------WL 230 K++ DK+ ++++L PE + W Sbjct: 206 AKQMTVAHGDKFVRPAADVLAGTPGLPEAERADDEAKRQRDLHLDALIANAKVLLGPDW- 264 Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290 V +++ + RDDL+ + D++ SE D + +D L + G++Y Sbjct: 265 TYVHQHALSEQLADGRDDLEEFGVHFDVWFSEQALF--DTGLVARCVDLLEKNGHLY--- 319 Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350 + F+ST GD+ DR + + +G YTYFA+D+AY K+ERGFD Sbjct: 320 -------------VQNGARWFKSTTFGDEKDRVVQRENGLYTYFASDIAYHLNKFERGFD 366 Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 +I + G+DH GY+ R+ A+ +++ V L + LYR+G MS R+G+F+TL Sbjct: 367 KVINIWGADHHGYIARVNGAITALGLDASKLQVALVQFAVLYRNGQKASMSTRSGEFVTL 426 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQAK 469 R + EVG+D+ RF RK+ + LDFD K Q+ ENPV+Y+QYA+AR C I + Sbjct: 427 RELRGEVGNDACRFFYALRKSDQHLDFDLDLAKSQTNENPVYYIQYAHARVCSVINQWGG 486 Query: 470 DIFPDLDFDLF----PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 D+ D +L PR EL + LAE+ VI+ A P+ +AFYL Sbjct: 487 DLATLADANLALLDNPR------------ELAIASKLAEFRDVIDGAARELAPHLIAFYL 534 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 DLA FHG ++ R + ++ L R+ L AV I +G+ I+GV P+ M Sbjct: 535 KDLAGEFHGWYNAER-------MLVDDAALRDARVALAAAVRQTIRNGMTILGVSCPDSM 587 >gi|167749948|ref|ZP_02422075.1| hypothetical protein EUBSIR_00916 [Eubacterium siraeum DSM 15702] gi|167657115|gb|EDS01245.1| hypothetical protein EUBSIR_00916 [Eubacterium siraeum DSM 15702] Length = 584 Score = 317 bits (812), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 192/600 (32%), Positives = 308/600 (51%), Gaps = 56/600 (9%) Query: 11 LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 + N L + + K+E L +ERP D +HG S NAAM ++ L +P I ++I Sbjct: 16 IMNALGRLVAEGKIEAVPLPAFNVERPADVSHGDFSCNAAMASAKALRNNPRAIGQMIAD 75 Query: 71 RIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129 +D V + + +AG GF+N ++SP + + + ++ SG +YG+ +GKG +V +EFVS Sbjct: 76 AAVLDGTVFEKIEVAGPGFLNFFISPLWFNETVGEVISSGSDYGKTELGKGKRVLVEFVS 135 Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189 ANPTGPMH+G+ R +GD+L+S++ F+GYEV RE+Y+NDAG QI S+ RY Q Sbjct: 136 ANPTGPMHIGNARGGALGDSLSSVLQFAGYEVEREFYVNDAGNQIEKFGKSLSIRYMQIA 195 Query: 190 YNNDSD----------------------LPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227 N SD +PE Y GV + + +N EE Sbjct: 196 DGNKSDVIASYGDDDVCRKIFEDEENFPMPEDVYKGVDIIEHAYNFYKINGDKFVNADEE 255 Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287 + +Y++ + + DL I +D + E H+ ++ I+D L +G Y Sbjct: 256 SRKSALVEYALPLNIDGLEKDLAKYRIVYDTWFRESSLHKS--GAVKQIVDMLTDKGQTY 313 Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-E 346 E + F+++ GDD DR L++++G TYF D+AY K Sbjct: 314 E----------------KDGAIWFKASDFGDDQDRVLVRANGIPTYFVPDIAYHYNKLVT 357 Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406 RGFD I ++G+DH GY+ R++A A+ +++++++ ++V L R+G +K+SKR+G Sbjct: 358 RGFDKAIDILGADHHGYIARMKAALTALGVDASKLDIVIMQMVMLVRNGETVKLSKRSGK 417 Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466 ITL ++DEV D+ RF R + L+FD E+S NPVFYVQYA+AR SI R Sbjct: 418 AITLSTLLDEVPIDAARFFFNLRDPNTHLEFDLELAIEESSNNPVFYVQYAHARICSILR 477 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 + ++ N+ E F+ +EL LI H+A P I A P K+ YL Sbjct: 478 RMEEEGTGY------SNIPVSELNFNHPAELALIRHIAALPNCINEAAKDYNPSKITKYL 531 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 DLA +FH + + + ++ + RL L A ++ + L+++ V++P +M Sbjct: 532 CDLAQLFHKFYDNCK-------IKGEEENILQSRLSLCVATKTVFKNLLDLLKVDAPEKM 584 >gi|41408568|ref|NP_961404.1| arginyl-tRNA synthetase [Mycobacterium avium subsp. paratuberculosis K-10] gi|81413777|sp|Q73X40|SYR_MYCPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|41396926|gb|AAS04787.1| ArgS [Mycobacterium avium subsp. paratuberculosis K-10] Length = 550 Score = 317 bits (812), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 197/591 (33%), Positives = 301/591 (50%), Gaps = 54/591 (9%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + L+N + + ++ L +V+ERPR+ HG ++N A+ L + +G +P Sbjct: 4 ADLAELLRNTAAAVLAERGLDAAALPATVVVERPRNPEHGDYASNLALQLGKKVGANPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + A + + S +AG GFINL L S ++++++ +G YG + + Sbjct: 64 LAGWLAAALAETDGIASAEVAGPGFINLRLEASAQAVVVTNVLDAGDRYGHSDAQSTHNI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L++ G V REYY ND GAQI+ A S+ Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGAGVVREYYFNDHGAQIDRFASSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + ++ + + + L+ PE + + V M Sbjct: 184 AAK------GEPTPEDGYAGSYINDIAAQVL-RQAPDALSLPEPQLRETFRAIGVDLMFT 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I++ L D++ ED H + I L G +YE K T Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMHTS--GRVDQAIARLRETGNIYE------KDGAT---- 284 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 R++ GDD DR ++KSDG Y A D+AY+ K +RGFD IY++G+DH GY Sbjct: 285 ------WLRTSAFGDDKDRVVIKSDGKPAYIAGDIAYYLDKRQRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+AVAAA + A + VL+ ++V L RDG P++MSKRAG ITL +V+ +G D+ R Sbjct: 339 IARLKAVAAAFGDDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D S ENPV+YVQYA+AR ++ R A ++ Sbjct: 399 YSLIRSSVDTPIDIDLALWSSASNENPVYYVQYAHARLSALARNAAEL-----------G 447 Query: 484 VIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 +IP DT+ L+L+ H L E+PRV++ A +EP+++ YL DLA +H Sbjct: 448 LIP-----DTAHLELLSHDKEGTLLRTLGEFPRVLKTAASLREPHRVCRYLEDLAGDYHR 502 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R P+ L RL L A +I +GL I+GV +P M Sbjct: 503 FYDSCRVLPQ---GDEQPTDLHTARLALCQATRQVIANGLAILGVTAPERM 550 >gi|15836752|ref|NP_297440.1| arginyl-tRNA synthetase [Xylella fastidiosa 9a5c] gi|9104936|gb|AAF82960.1|AE003868_6 arginyl-tRNA synthetase [Xylella fastidiosa 9a5c] Length = 586 Score = 317 bits (812), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 188/563 (33%), Positives = 295/563 (52%), Gaps = 42/563 (7%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 V+ERP+ HG +TN AM+LS+ G +P +A+ +VA + D+ + IAG GFIN + Sbjct: 56 VVERPKTRKHGDFATNVAMLLSKATGSNPRLLAQTLVAALPTSADIARIEIAGPGFINFH 115 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L P ++ +++ +YGRNL G+ V +E+VSANPTGP+HVGH R A +GD LA Sbjct: 116 LHPVAYQRETINVLKQDNDYGRNLSGQSRTVGVEYVSANPTGPLHVGHGRAAAIGDCLAR 175 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211 L+ +G+ V RE+Y NDAG QI L SV R + L D+ P Y G Y+ + K Sbjct: 176 LLEANGWNVKREFYYNDAGVQIENLVRSVQAR-ARGLKPGDAFWPTDAYNGEYIADIAKA 234 Query: 212 -------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 + D + N + + ++V + DL A N+ DI+ E Sbjct: 235 YLAGDSINMVDTIITSTKNVDDTA---AIHHFAVNYLRNEQNHDLAAFNVDFDIYFLESS 291 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 ++ + + + L G+ YE + L +ST GDD DR + Sbjct: 292 LYKD--GKVEETVQKLINSGHTYE----------------EGGALWLKSTHFGDDKDRVM 333 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQIN 382 KSDGSYTYF D+AY K++RG++ I +G+DH G + R+ A A + Sbjct: 334 RKSDGSYTYFVPDIAYHLSKWQRGYERAITELGADHHGSLARVHAGLQALEIGIPPGWPE 393 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 +L ++V + R G +K+SKR+G ++TLR +++E +D+ R+ ++ RK L FD Sbjct: 394 YVLHQMVTVMRGGEEVKLSKRSGGYVTLRDLIEETSTDATRWFLIARKPDSQLTFDIDLA 453 Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 +++S +NPVFYVQYAYAR S+ QA + +L++D + + D + L L++ + Sbjct: 454 RQKSNDNPVFYVQYAYARVCSLMHQAHE--KNLNYDQ-TSGMASLDQLSDNTSLCLMIEI 510 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 + YP +++ A EP+ +A YL +LA FH W H V N +L L Sbjct: 511 SRYPEIVQIACELLEPHLIAQYLRELAHAFHT-WYHNTP------VLVENAVERNAKLTL 563 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 A ++ +GLN++GV +P +M Sbjct: 564 ACATRQVLANGLNLLGVGTPEKM 586 >gi|28198052|ref|NP_778366.1| arginyl-tRNA synthetase [Xylella fastidiosa Temecula1] gi|71899271|ref|ZP_00681433.1| Arginyl-tRNA synthetase, class Ic [Xylella fastidiosa Ann-1] gi|182680680|ref|YP_001828840.1| arginyl-tRNA synthetase [Xylella fastidiosa M23] gi|32130169|sp|Q87F22|SYR_XYLFT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|238691058|sp|B2I6M4|SYR_XYLF2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|28056112|gb|AAO28015.1| arginyl-tRNA synthetase [Xylella fastidiosa Temecula1] gi|71731004|gb|EAO33073.1| Arginyl-tRNA synthetase, class Ic [Xylella fastidiosa Ann-1] gi|182630790|gb|ACB91566.1| arginyl-tRNA synthetase [Xylella fastidiosa M23] gi|307579142|gb|ADN63111.1| arginyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 562 Score = 317 bits (812), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 188/563 (33%), Positives = 295/563 (52%), Gaps = 42/563 (7%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 V+ERP+ HG +TN AM+LS+ G +P +A+ +VA + D+ + IAG GFIN + Sbjct: 32 VVERPKTRKHGDFATNVAMLLSKATGSNPRLLAQTLVAALPTSADIARIEIAGPGFINFH 91 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L P ++ +++ +YGRNL G+ V +E+VSANPTGP+HVGH R A +GD LA Sbjct: 92 LHPVAYQRETINVLKQDNDYGRNLSGQSRTVGVEYVSANPTGPLHVGHGRAAAIGDCLAR 151 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211 L+ +G+ V RE+Y NDAG QI L SV R + L D+ P Y G Y+ + K Sbjct: 152 LLEANGWNVKREFYYNDAGVQIENLVRSVQAR-ARGLKPGDALWPTDAYNGEYIADIAKA 210 Query: 212 -------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 + D + N + + ++V + DL A N+ DI+ E Sbjct: 211 YLAGDSINMVDTIITSTKNVDDTA---AIHHFAVNYLRNEQNHDLAAFNVDFDIYFLESS 267 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 ++ + + + L G+ YE + L +ST GDD DR + Sbjct: 268 LYK--DGKVEETVQKLINSGHTYE----------------EGGALWLKSTHFGDDKDRVM 309 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQIN 382 KSDGSYTYF D+AY K++RG++ I +G+DH G + R+ A A + Sbjct: 310 RKSDGSYTYFVPDIAYHLSKWQRGYERAITELGADHHGSLARVHAGLQALEIGIPPGWPE 369 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 +L ++V + R G +K+SKR+G ++TLR +++E +D+ R+ ++ RK L FD Sbjct: 370 YVLHQMVTVMRGGEEVKLSKRSGGYVTLRDLIEETSTDATRWFLIARKPDSQLTFDIDLA 429 Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 +++S +NPVFYVQYAYAR S+ QA + +L++D + + D + L L++ + Sbjct: 430 RQKSNDNPVFYVQYAYARVCSLMHQAHE--KNLNYDQ-TSGMASLDQLSDNTSLCLMIEI 486 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 + YP +++ A EP+ +A YL +LA FH W H V N +L L Sbjct: 487 SRYPEIVQIACELLEPHLIAQYLRELAHAFHT-WYHNTP------VLVENAVERNAKLTL 539 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 A ++ +GLN++GV +P +M Sbjct: 540 ACATRQVLANGLNLLGVGTPEKM 562 >gi|311693359|gb|ADP96232.1| arginyl-tRNA synthetase [marine bacterium HP15] Length = 561 Score = 317 bits (812), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 194/563 (34%), Positives = 298/563 (52%), Gaps = 44/563 (7%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 + +D +HG + N A++ S+ G P +AE +V + V+ V IAG GFIN ++ Sbjct: 32 VGNTKDKSHGDYACNIALVASKAAGCAPRKLAEALVENLPESSAVEKVEIAGPGFINFFM 91 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 S + +++++I+ G +GRN G+G KV +EFVSANPTGP+HVGH R A +GD L L Sbjct: 92 STASAFEVVNTILDEGDRFGRNNQGQGEKVQVEFVSANPTGPLHVGHGRGAAIGDCLCRL 151 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE- 212 + +GY+VTRE+Y NDAGAQI+ LALSV R + L +D P Y G Y+ V K Sbjct: 152 LEANGYDVTREFYYNDAGAQIDNLALSVQSRV-KGLTPDDESWPADGYRGDYIVDVAKAY 210 Query: 213 ------LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 AD PE++ +++++V + + DLKA +Q D++ E + Sbjct: 211 LAGDTVTADDREVTAKADPEDR--DAIREFAVAYLRREQDLDLKAFGVQFDVYFLESSLY 268 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 + + + L GY YE + ++T GDD DR + K Sbjct: 269 --EDGKVEATVKRLQENGYTYE----------------QDGAMWLKTTEFGDDKDRVMRK 310 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ--INVL 384 DG YTYF D+AY K++RGF +I G+DH V R+ A A++ Q + + Sbjct: 311 KDGGYTYFLPDVAYHLDKWQRGFTTVINEQGADHHSTVTRVRAGLQALNAGIPQGWPDYV 370 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L ++V + R G +K+SKRAG ++T+R ++DEVG D+ RF + R+ L FD + Sbjct: 371 LHQMVMVTRSGQEVKISKRAGSYVTVRDLIDEVGRDATRFFLAARRVDSQLTFDIDLARS 430 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT--SELQLIVHL 502 Q+ ENPV+YVQYA+AR S+ R+ + + RN + T E L L Sbjct: 431 QTNENPVYYVQYAHARICSVLRKLAEEGVER-----SRNECIGDLSLLTLDEEKDLANQL 485 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 A+YP +I N+ +EP+ L YL DLA FH +++ + V + + R+ L Sbjct: 486 AKYPELIANSAAQREPHHLTHYLRDLAGQFHTYYNAHK-------VLIEDTAVRDARVSL 538 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 A+ +I +GL+++GV +P EM Sbjct: 539 YLAIRQVIANGLDLLGVSAPEEM 561 >gi|312194803|ref|YP_004014864.1| arginyl-tRNA synthetase [Frankia sp. EuI1c] gi|311226139|gb|ADP78994.1| arginyl-tRNA synthetase [Frankia sp. EuI1c] Length = 558 Score = 317 bits (812), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 196/591 (33%), Positives = 310/591 (52%), Gaps = 46/591 (7%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 AD + + + ++ ++ + + +ERP++ HG ++ AA+ L++ P + Sbjct: 4 ADLADVIVSAVRAAVTDGAIDVAVPATVPVERPKNPEHGDYASPAALQLAKAARRAPREV 63 Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 AEL+ R++ DP + +V +AG GF+N+ L+ L ++ +IV +G YGR KG +VN Sbjct: 64 AELLADRLRKDPGIATVDVAGPGFLNIKLASDALGELARAIVRAGEAYGRAPQRKGVRVN 123 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGP+ + R A VGD L + +GY+ EYY+NDAG QI SV Sbjct: 124 VEFVSANPTGPVTLASTRWAAVGDALVRIFDAAGYDTASEYYVNDAGVQIARFGASVLAA 183 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 + PE Y G Y+ + L + +LL + + L + + M+ Sbjct: 184 AKG------EPTPEDGYHGAYVAEIAARLLADH-PDLLAGDDAQALAVAARDGLALMLTE 236 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 IR L+ + D++ SE H + + + +L G+VY D Sbjct: 237 IRSTLEGFGVHFDVWKSELSMH--EAGELEAAVADLRTHGHVY---------------DA 279 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 D + R+T GDD DRPL+KSDG TYF AD AY++ K RGFD ++ ++G+DH GY+ Sbjct: 280 D-GAVFLRTTDFGDDKDRPLIKSDGQPTYFCADAAYYRNKRGRGFDRLVLLLGADHHGYI 338 Query: 365 KRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 RL+A+AA + + ++V++ +LV L R G P+KMSKRAG+F+TL +VD VG D+ R Sbjct: 339 GRLQALAACFGDNPDESLDVIIGQLVTLSRGGEPVKMSKRAGNFLTLADLVDVVGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI------FPDLDF 477 + ++ LD D + +Q+ +NPVFYVQYA+AR S+ R A + P Sbjct: 399 YSLVRSSLDSSLDLDLDLIAKQTNDNPVFYVQYAHARIASLLRNAAALGITPADGPGAVL 458 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 D +++ E D L+ L E P V+ +A + P+++A YL +LA +H Sbjct: 459 DGIDVSLLEHPREGD-----LLRALGELPTVVASAASLRAPHRVARYLEELAGTYH---- 509 Query: 538 HGRENPRLRFVQANNRK---LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R N R + + + LT RL LV A ++ +GL ++GV +P M Sbjct: 510 --RFNDACRVLPRGDEEPTPLTAARLLLVEATKVVLANGLRLLGVSAPERM 558 >gi|23822211|sp|Q9PGZ9|SYR_XYLFA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS Length = 562 Score = 317 bits (811), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 188/563 (33%), Positives = 295/563 (52%), Gaps = 42/563 (7%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 V+ERP+ HG +TN AM+LS+ G +P +A+ +VA + D+ + IAG GFIN + Sbjct: 32 VVERPKTRKHGDFATNVAMLLSKATGSNPRLLAQTLVAALPTSADIARIEIAGPGFINFH 91 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L P ++ +++ +YGRNL G+ V +E+VSANPTGP+HVGH R A +GD LA Sbjct: 92 LHPVAYQRETINVLKQDNDYGRNLSGQSRTVGVEYVSANPTGPLHVGHGRAAAIGDCLAR 151 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211 L+ +G+ V RE+Y NDAG QI L SV R + L D+ P Y G Y+ + K Sbjct: 152 LLEANGWNVKREFYYNDAGVQIENLVRSVQAR-ARGLKPGDAFWPTDAYNGEYIADIAKA 210 Query: 212 -------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 + D + N + + ++V + DL A N+ DI+ E Sbjct: 211 YLAGDSINMVDTIITSTKNVDDTA---AIHHFAVNYLRNEQNHDLAAFNVDFDIYFLESS 267 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 ++ + + + L G+ YE + L +ST GDD DR + Sbjct: 268 LYK--DGKVEETVQKLINSGHTYE----------------EGGALWLKSTHFGDDKDRVM 309 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQIN 382 KSDGSYTYF D+AY K++RG++ I +G+DH G + R+ A A + Sbjct: 310 RKSDGSYTYFVPDIAYHLSKWQRGYERAITELGADHHGSLARVHAGLQALEIGIPPGWPE 369 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 +L ++V + R G +K+SKR+G ++TLR +++E +D+ R+ ++ RK L FD Sbjct: 370 YVLHQMVTVMRGGEEVKLSKRSGGYVTLRDLIEETSTDATRWFLIARKPDSQLTFDIDLA 429 Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 +++S +NPVFYVQYAYAR S+ QA + +L++D + + D + L L++ + Sbjct: 430 RQKSNDNPVFYVQYAYARVCSLMHQAHE--KNLNYDQ-TSGMASLDQLSDNTSLCLMIEI 486 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 + YP +++ A EP+ +A YL +LA FH W H V N +L L Sbjct: 487 SRYPEIVQIACELLEPHLIAQYLRELAHAFHT-WYHNTP------VLVENAVERNAKLTL 539 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 A ++ +GLN++GV +P +M Sbjct: 540 ACATRQVLANGLNLLGVGTPEKM 562 >gi|229490016|ref|ZP_04383869.1| arginyl-tRNA synthetase [Rhodococcus erythropolis SK121] gi|229323117|gb|EEN88885.1| arginyl-tRNA synthetase [Rhodococcus erythropolis SK121] Length = 550 Score = 317 bits (811), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 186/582 (31%), Positives = 300/582 (51%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + L+ + ++ +L + + +ERPR+ HG +TN AM +++ +G +P Sbjct: 4 ADLAELLRGTAASVLADRGLDVSVLPETLTVERPRNPEHGDYATNIAMQVAKKVGTNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A I + ++S IAG GF+N+ L I+ S++ +G YG G K+ Sbjct: 64 LAGWIAEALTAADGIESAEIAGPGFLNIRLDKDAQGAIVVSVLEAGASYGSGDSLAGKKI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L +++ G VTREYY ND GAQI+ + S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRILSAQGGLVTREYYFNDHGAQIDRFSRSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + + K ++++ P ++ + V+ M Sbjct: 184 AAKG------EPAPEDGYAGAYIADIAASVL-KQRPDVMDLPADEQQETFRAIGVELMFT 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L + D++ E+ + + +++L G ++ Sbjct: 237 HIKQTLHDFGVDFDVYFHENSLF--ESGAVEKAVESLKGSGNLFH--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 + +ST GDD DR ++KSDG+ Y A D+AYF+ K RGFD IY++G+DH GY Sbjct: 280 -EDGAWWLKSTDYGDDKDRVVIKSDGNAAYIAGDIAYFQNKRARGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA + + VL+ ++V L +DG +KMSKRAG ITL +V+ +G D+ R Sbjct: 339 IGRLKAAAAAFGDDPDTVEVLIGQMVNLVKDGTAVKMSKRAGTVITLDDLVEAIGVDASR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 ++M+ +D D + S ENPV+YVQYA+AR +I R A D+ D Sbjct: 399 YVMIRSSVDSSIDIDLDLWTKTSSENPVYYVQYAHARLSAIARNAADLGLSADASNLALL 458 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + QE + LI + EYPRV+ +A +EP+++A YL +LA +H + R P Sbjct: 459 TVEQEGD-------LIRTIGEYPRVVSSAANLREPHRIARYLEELAGAYHRFYGACRILP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + RL L A ++ +GL ++GV +P +M Sbjct: 512 Q---GDEDATDVHRARLALCAATRQVLANGLELLGVTAPEQM 550 >gi|292490188|ref|YP_003525627.1| arginyl-tRNA synthetase [Nitrosococcus halophilus Nc4] gi|291578783|gb|ADE13240.1| arginyl-tRNA synthetase [Nitrosococcus halophilus Nc4] Length = 585 Score = 317 bits (811), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 196/586 (33%), Positives = 308/586 (52%), Gaps = 62/586 (10%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I ++R RD HG ++N M+L++ P +A LIV+R+ P V+ V IAG GFIN Sbjct: 30 IQVKRTRDKRHGDFASNITMMLAKEARQKPRDLAGLIVSRLPEHPWVEKVEIAGPGFINF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+ + ++S ++ ++G + +G+ V++EFVSANPTGP+HVGH R A GD LA Sbjct: 90 TLALPAFQAVVSLVLDQREDFGCSNLGQNKPVHLEFVSANPTGPLHVGHGRGAAYGDALA 149 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV-- 209 L+ GY++ REYY+NDAG Q++ LA SV+ RY + L P Y G Y++ + Sbjct: 150 RLLTTVGYKIHREYYVNDAGRQMDILAASVWLRYLE-LCGETLPFPANGYRGSYVRDIAQ 208 Query: 210 -------------GKELADKYSSELLNFPEEKWLPI----------------VKDYSVQA 240 G+E+ D + +E+++ V D + + Sbjct: 209 VLKTEKDDIFHRPGQEILDGLPPDAPTGDKEQYIDALIQKCKDLLGERGYRQVFDQGLNS 268 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 ++ IR+DL + +D + SE H + + ++ L ++Y+ Sbjct: 269 ILADIREDLAEFGVTYDEWFSER--HLMETGAVEQAVEQLKTSSHLYQ------------ 314 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 FRST GD+ DR +++ +G TYFA+D+AY K ERG+ +I V G+DH Sbjct: 315 ----KEGAWWFRSTDFGDEKDRVVIRENGQPTYFASDIAYHLNKLERGYPKIIDVWGADH 370 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GYV+R+++ A+ Q+ + L + LYR ++MS R+G+F+TLR + EVG D Sbjct: 371 HGYVQRVKSSLQALGADPQQLEIRLVQFAILYRGKEKVQMSTRSGEFVTLRELRQEVGKD 430 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 + RF + R + +DFD K QS ENPV+YVQYA+AR S+FRQ ++ L +D Sbjct: 431 AARFFYVMRSAEQHMDFDLELAKSQSNENPVYYVQYAHARISSVFRQLEE--RGLAWD-- 486 Query: 481 PRNVIPQESEFDTS-ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 P+ Q + + S E+ L+ L+ Y V+E+A P+ LA+YL DLA FH ++ Sbjct: 487 PKQGRKQLQKLNESHEVALLDRLSCYSEVVEDAATQSAPHLLAYYLMDLARDFHTYY--- 543 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N V + +L RL L+ A +I +GL ++GV +P M Sbjct: 544 --NAHTFLV--DTPELRDARLTLIAATQQVIKNGLTLLGVSAPEAM 585 >gi|291557256|emb|CBL34373.1| arginyl-tRNA synthetase [Eubacterium siraeum V10Sc8a] Length = 584 Score = 317 bits (811), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 191/598 (31%), Positives = 307/598 (51%), Gaps = 56/598 (9%) Query: 13 NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72 N L + + K+E L +ERP D +HG S NAAM ++ L +P I ++I Sbjct: 18 NALGRLVAEGKIEAVPLPAFNVERPADVSHGDFSCNAAMASAKALRNNPRAIGQMIADAA 77 Query: 73 KIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131 +D V + + +AG GF+N ++SP + + + ++ SG +YG+ +GKG +V +EFVSAN Sbjct: 78 VLDGTVFEKIEVAGPGFLNFFISPLWFNETVGEVISSGSDYGKTELGKGKRVLVEFVSAN 137 Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 PTGPMH+G+ R +GD+L+S++ F+GYEV RE+Y+NDAG QI S+ RY Q Sbjct: 138 PTGPMHIGNARGGALGDSLSSVLQFAGYEVEREFYVNDAGNQIEKFGKSLSIRYMQIADG 197 Query: 192 NDSD----------------------LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229 N +D +PE Y GV + + +N EE Sbjct: 198 NKADVIASYGDDDVCRKIFEDEENFPMPEDVYKGVDIIEHAYNFYKINGDKFVNADEESR 257 Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 + +Y++ + + DL I +D + E H+ ++ I+D L +G YE Sbjct: 258 KSALVEYALPLNIDGLEKDLAKYRIVYDTWFRESSLHKS--GAVKQIVDMLTEKGQTYE- 314 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERG 348 + F+++ GDD DR L++++G TYF D+AY K RG Sbjct: 315 ---------------KDGAIWFKASDFGDDQDRVLVRANGIPTYFVPDIAYHYNKLVTRG 359 Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 FD I ++G+DH GY+ R++A A+ +++++++ ++V L R+G +K+SKR+G I Sbjct: 360 FDKAIDILGADHHGYIARMKAALTALGVDASKLDIVIMQMVMLVRNGETVKLSKRSGKAI 419 Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 TL ++DEV D+ RF R + L+FD E+S NPVFYVQYA+AR SI R+ Sbjct: 420 TLSTLLDEVPIDAARFFFNLRDPNTHLEFDLELAIEESSNNPVFYVQYAHARICSILRRM 479 Query: 469 KDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 ++ N+ E F+ +EL LI H+A P I A P K+ YL D Sbjct: 480 EEEGTGYS------NIPVSELNFNHPAELALIRHIAALPNCINEAAKDYNPSKITKYLCD 533 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA +FH + + + ++ + RL L A ++ + L+++ V++P +M Sbjct: 534 LAQLFHKFYDNCK-------IKGEEENILQSRLSLCVATKTVFKNLLDLLKVDAPEKM 584 >gi|71275891|ref|ZP_00652174.1| Arginyl-tRNA synthetase, class Ic [Xylella fastidiosa Dixon] gi|71901382|ref|ZP_00683475.1| Arginyl-tRNA synthetase, class Ic [Xylella fastidiosa Ann-1] gi|71163268|gb|EAO12987.1| Arginyl-tRNA synthetase, class Ic [Xylella fastidiosa Dixon] gi|71728841|gb|EAO30979.1| Arginyl-tRNA synthetase, class Ic [Xylella fastidiosa Ann-1] Length = 562 Score = 316 bits (810), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 188/563 (33%), Positives = 295/563 (52%), Gaps = 42/563 (7%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 V+ERP+ HG +TN AM+LS+ G +P +A+ +VA + D+ + IAG GFIN + Sbjct: 32 VVERPKTRKHGDFATNVAMLLSKATGSNPRLLAQTLVAALPTSADIARIEIAGPGFINFH 91 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L P + +++ +YGRNL G+ V +E+VSANPTGP+HVGH R A +GD LA Sbjct: 92 LHPVAYQHETINVLKQDNDYGRNLSGQSRTVGVEYVSANPTGPLHVGHGRAAAIGDCLAR 151 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211 L+ +G+ V RE+Y NDAG QI+ L SV R + L D+ P Y G Y+ + K Sbjct: 152 LLEANGWNVKREFYYNDAGVQIDNLVRSVQAR-ARGLKPGDALWPTDAYNGEYIADIAKA 210 Query: 212 -------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 + D + N + + ++V + DL A N+ DI+ E Sbjct: 211 YLAGDSINMVDTIITSTKNVDDTA---AIHHFAVNYLRNEQNHDLAAFNVDFDIYFLESS 267 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 ++ + + + L G+ YE + L +ST GDD DR + Sbjct: 268 LYK--DGKVEETVQKLINSGHTYE----------------EGGALWLKSTHFGDDKDRVM 309 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQIN 382 KSDGSYTYF D+AY K++RG++ I +G+DH G + R+ A A + Sbjct: 310 RKSDGSYTYFVPDIAYHLSKWQRGYERAITELGADHHGSLARVHAGLQALEIGIPPGWPE 369 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 +L ++V + R G +K+SKR+G ++TLR +++E +D+ R+ ++ RK L FD Sbjct: 370 YVLHQMVTVMRGGEEVKLSKRSGGYVTLRDLIEETSTDATRWFLIARKPDSQLTFDIDLA 429 Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 +++S +NPVFYVQYAYAR S+ QA + +L++D + + D + L L++ + Sbjct: 430 RQKSNDNPVFYVQYAYARVCSLMHQAHE--KNLNYDQ-TSGMASLDQLSDNTSLCLMIEI 486 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 + YP +++ A EP+ +A YL +LA FH W H V N +L L Sbjct: 487 SRYPEIVQIACELLEPHLIAQYLRELAHAFHT-WYHNTP------VLVENAVERNAKLTL 539 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 A ++ +GLN++GV +P +M Sbjct: 540 ACATRQVLANGLNLLGVGTPEKM 562 >gi|262201839|ref|YP_003273047.1| arginyl-tRNA synthetase [Gordonia bronchialis DSM 43247] gi|262085186|gb|ACY21154.1| arginyl-tRNA synthetase [Gordonia bronchialis DSM 43247] Length = 550 Score = 316 bits (810), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 191/564 (33%), Positives = 291/564 (51%), Gaps = 41/564 (7%) Query: 25 EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84 E + D + +ERPR HG STN A+ L + LG+ P +A + + +A Sbjct: 25 ETLVPDSVGVERPRHADHGDYSTNIALQLGKRLGVSPRELAGWLAEAYAGADGIAKAEVA 84 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 G GF+NL+L+ + +++++V G EYGR G+ +N+EFVSANPTGP+H+G R A Sbjct: 85 GPGFVNLWLAAAAQNTVIATVVEQGAEYGRGDELGGSVINLEFVSANPTGPIHLGGTRWA 144 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204 VGD L ++ G VTREYY ND G QI+ A S+ Q PE Y G Sbjct: 145 AVGDALGRVLGARGAAVTREYYFNDHGTQIDRFARSLEAAAQGG------PTPEDGYAGA 198 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 Y+ + + + +L P+++ + + V+ M I++ L D+F ED Sbjct: 199 YIGDIAAAVVQQVPG-VLEQPDDERVETFRSVGVELMFAHIKESLHEFGTDFDVFTHED- 256 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 ++ G V E I + K K RST GDD DR + Sbjct: 257 --------------SMFTSGLVDECI---AELKANDKLYEKDGAWWLRSTEFGDDKDRVV 299 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 +KSDG+ Y A D+AY + K RGF IY++G+DH GY+ RL+A AAA+ + + VL Sbjct: 300 IKSDGNAAYIAGDIAYIRDKRNRGFSLCIYMLGADHHGYISRLKAAAAALGDDPDVVEVL 359 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 + ++V L RDG P++MSKRAG ITL +V+ VG D R+ ++ +D D + + Sbjct: 360 IGQMVNLVRDGKPVRMSKRAGTVITLDDLVEAVGVDGARYSLIRSSVDVNIDIDLDLLTK 419 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIF--PDL-DFDLFPRNVIPQESEFDTSELQLIVH 501 QS ENPV+YVQYA+AR ++ R A D+ PDL + DL D +E +LI Sbjct: 420 QSNENPVYYVQYAHARLSALSRNAADLGLQPDLANIDLL----------VDPAEGELIRT 469 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 + ++ V+ A +EP+++ YL LA +H ++ R P+ A+ + RL Sbjct: 470 IGDFDEVVATAASLREPHRVCRYLESLAGAYHRFYARCRVLPQGDEEPAD---IHRARLA 526 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 L A ++ +GL+++GV +P M Sbjct: 527 LCAATRQVLANGLDLVGVSAPERM 550 >gi|302529809|ref|ZP_07282151.1| arginyl-tRNA synthetase [Streptomyces sp. AA4] gi|302438704|gb|EFL10520.1| arginyl-tRNA synthetase [Streptomyces sp. AA4] Length = 554 Score = 316 bits (809), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 192/563 (34%), Positives = 289/563 (51%), Gaps = 45/563 (7%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 + + IERPR+ HG +TN A+ +++ GL P AE + + V + +AG GF+ Sbjct: 30 ETVTIERPRNPDHGDYATNLALQVAKKAGLKPREFAEALAEVVAGADGVAAAEVAGPGFL 89 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N L+ +++ ++ +G EYGR G ++N+EFVSANPTGP+H+G R A VGD Sbjct: 90 NFRLAADAQGEVVRQVLAAGAEYGRGDALAGRRINLEFVSANPTGPIHLGGTRWAAVGDA 149 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 L ++ G +VTREYY NDAGAQI+ S+ + PE Y G Y+ + Sbjct: 150 LGRVLGAQGADVTREYYFNDAGAQIDRFVRSLIAAAK------GEPAPEDGYAGGYISDI 203 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 E+ K L+ PE + + ++ M I+ L D++ E+ H + Sbjct: 204 AAEVL-KAEPSALSLPEVQRHETFRRIGIELMFSQIKQSLHEFGTDFDVYFHENSLH--E 260 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + + L G +Y +S+ GDD DR +LK DG Sbjct: 261 SGAVDAAVQQLKDSGNLY----------------FADGAWWLKSSEYGDDKDRVVLKKDG 304 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 + Y A DLAYFK K RGFD IY++G+DH GY+ RL+A AAA + A + VL+ ++V Sbjct: 305 NPAYIAGDLAYFKDKRNRGFDLCIYMLGADHHGYIARLKAAAAAFGDDPATVEVLIGQMV 364 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 L DG P++MSKRAG ITL +V+ VG D R+ ++ LD D +++ S +N Sbjct: 365 NLVSDGKPVRMSKRAGTVITLEDLVEAVGVDPARYELIRYSVDSSLDIDLDLLRKHSNDN 424 Query: 450 PVFYVQYAYARCRSIFRQAKDI-------FPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 PV+YVQYA+AR S+ R A D+ D DF L +P E + LI + Sbjct: 425 PVYYVQYAHARLSSLRRGAADLGLKVDESGADADFGLL---TLPAEGD-------LIRTI 474 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 E+P V+ A +EP+++A YL +LA +H ++ GR P+ LT RL L Sbjct: 475 GEFPAVVRRAAEMREPHRVARYLEELAGAYHKFYTVGRVLPQ---GDEEATPLTYARLAL 531 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 A ++ +GL+++GV +P M Sbjct: 532 CEAARQVLANGLSLLGVSAPERM 554 >gi|323356884|ref|YP_004223280.1| arginyl-tRNA synthetase [Microbacterium testaceum StLB037] gi|323273255|dbj|BAJ73400.1| arginyl-tRNA synthetase [Microbacterium testaceum StLB037] Length = 554 Score = 316 bits (809), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 188/553 (33%), Positives = 291/553 (52%), Gaps = 35/553 (6%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +ERP++ HG ++NAAM L++ +G +P A I A ++ + SV +AG GFIN+ L Sbjct: 36 LERPKNRDHGDWASNAAMKLAKVVGANPREFAAEIAAGLESVDGIASVEVAGPGFINIRL 95 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + + IV G +G N +N+EFVSANPTGP+H+G R A +GD LA + Sbjct: 96 DAAAAGALAKVIVEQGEAFGTNDSRADEVINLEFVSANPTGPIHLGGTRWAALGDALARI 155 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 ++ G +VTREYY ND GAQI+ A S+ +Q PE Y G Y+ + K + Sbjct: 156 LSAQGAQVTREYYFNDHGAQIDRFARSLVAAHQG------DPTPEDGYGGAYIGDIAKRV 209 Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273 A+ Y ++ + ++ V M I+ L + D++ E+D H + + Sbjct: 210 AEAYDGDVDALDADAKQEAFRELGVNFMFDEIKQSLHEFGVDFDVYFHENDLH--NSGAV 267 Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333 + L G+++E RST GDD DR ++KSDG Y Sbjct: 268 ERAVARLRELGHIFEA----------------DGATWLRSTEFGDDKDRVIIKSDGQPAY 311 Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCELVRLY 392 + DLAY+ K ERGF+ I ++G+DH GYV+RL A+ AA E + VL+ ++V L Sbjct: 312 ISGDLAYYLDKRERGFNRCIIMLGADHHGYVQRLMAMCAAFGDEPNVNLQVLIGQMVNLV 371 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 RDG P++MSKRAG +TL +V+ VG D+ R+ + LD D +++++ +NPVF Sbjct: 372 RDGQPMRMSKRAGTVVTLEDLVEIVGVDAARYALTRSSADSNLDIDLDVLQKRTNDNPVF 431 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 YVQYA+AR ++ R A +D F ++ ESE L+ L EYPR++ +A Sbjct: 432 YVQYAHARTHNVARNAA--ASGVDRSEFAPELLDHESES-----ALLGALQEYPRIVAHA 484 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572 +EP+++A YL +LA ++H + + R P A + RL L A ++ + Sbjct: 485 ADVREPHRVARYLEELAGLYHRWYDNCRVIP---LSDAPVETVHRTRLWLNDATGQVLRN 541 Query: 573 GLNIIGVESPNEM 585 GL ++GV +P M Sbjct: 542 GLTLLGVSAPERM 554 >gi|291541511|emb|CBL14621.1| arginyl-tRNA synthetase [Ruminococcus bromii L2-63] Length = 578 Score = 316 bits (809), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 192/562 (34%), Positives = 302/562 (53%), Gaps = 27/562 (4%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSVFIAGKGFIN 90 +IE P D +HG +TNAAM ++ + P IA+ I + + ++ + D AG GFIN Sbjct: 36 FIIETPADRSHGDFATNAAMAGAKAFRMPPFKIAQAITSNLDLEGTMFDRFETAGPGFIN 95 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +L + ++ I+ + YGR+ G+ KV +EFVSANPTGPMH+G+ R +GD L Sbjct: 96 FFLGTEFYSAVIREILANPEAYGRSEYGRDEKVMVEFVSANPTGPMHMGNARGGALGDCL 155 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+++ +GY RE+Y+NDAG QI S+ RY Q ++ + PE Y G +K + Sbjct: 156 AAVLDKAGYNAWREFYVNDAGNQIEKFGCSLEARYLQIFKGDEIEFPEDGYQGEDIKDLA 215 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 KE AD L+N E+ + DY++ +K ++ D++ I +D + E + H+ Sbjct: 216 KEYADLNGDSLVNVSAEERKKALVDYALPKNIKKMQADMEKYKIFYDKWFFESELHKS-- 273 Query: 271 SPIRDIIDNLARQGYVYE---GILPPPKSKTTQKCDMDRK-QLLFRSTMVGDDVDRPLLK 326 ++ ++D L +G YE + K TQK + K Q + + DDV L++ Sbjct: 274 GAVKAVVDLLTEKGLTYEKEGAVWYKNKEVLTQKLLKEGKSQKYIDNLELKDDV---LIR 330 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386 +G+ TYF AD+AY K K++RGF +I V G+DH G+V R++ A+ ++NV+L Sbjct: 331 QNGNPTYFTADIAYHKNKFDRGFTTLIDVWGADHHGHVMRMKGAMDAIGYDGDKLNVVLM 390 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446 +LV+L +DG ++MSKR G I L ++DEV DS RF+ ++ + +DFD Q Sbjct: 391 QLVKLVKDGELVRMSKRTGKAIQLGDLLDEVPVDSARFLFNTKEANTQMDFDLDLAVSQD 450 Query: 447 KENPVFYVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTS--ELQLIVHLA 503 +NPV+YVQYA+AR SIF+ AK+ + PR E T+ E +LI HLA Sbjct: 451 NQNPVYYVQYAHARICSIFKSLAKE-------GISPRECTDAELALLTAPEEKELINHLA 503 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 Y I +A +P K+ Y+ LA++FH ++ R V+ L RL L Sbjct: 504 SYTNEIISAAKDYDPTKVTRYVTQLATLFHKFYNACR-------VKGEEEGLMQARLALC 556 Query: 564 HAVASIINSGLNIIGVESPNEM 585 + V ++I + L + + P M Sbjct: 557 NCVRAVIKNVLTMFNISCPESM 578 >gi|269957251|ref|YP_003327040.1| arginyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894] gi|269305932|gb|ACZ31482.1| arginyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894] Length = 566 Score = 316 bits (809), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 191/572 (33%), Positives = 295/572 (51%), Gaps = 61/572 (10%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +ERPR HG +TN A+ L++ G +P +AE++ +R+ + V IAG GF+N+ L Sbjct: 36 VERPRQREHGDWATNVALQLAKKAGTNPRALAEVLASRLASVSGIKQVDIAGPGFLNITL 95 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + ++ SIV +G YG N G +N+EFVSANPTGP+H+G R A VGD+LA + Sbjct: 96 DAAAAGELARSIVETGATYGHNQAEAGKHINLEFVSANPTGPLHIGGVRWAAVGDSLARV 155 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + SG +VTREYY ND GAQI+ A S+ A ++ PE Y G Y+ +E+ Sbjct: 156 LEASGAQVTREYYFNDHGAQIDRFARSLL-----AAARGEA-APEDGYGGSYI----REI 205 Query: 214 ADKYSSELL--------NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 AD +++ L P+ + + VQ M ++ L + D+F ED Sbjct: 206 ADAVTAQALAAGEPAPATLPDGEAQEAFRARGVQMMFAEVKTSLHDFGVDFDVFFHEDSL 265 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 H + + + L G+++E R+T GDD DR ++ Sbjct: 266 H--ESGAVERAVARLRELGHIFEA----------------DGATWLRTTDFGDDKDRVVI 307 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVL 384 K DG Y A D+AY+ K ERG D IY++G+DH GYV R+ A+ AA + + +L Sbjct: 308 KRDGEAAYIAGDIAYYLDKRERGADEAIYMLGADHHGYVGRMMAICAAFGDTPGVTMQIL 367 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 + +LV L +DG P++MSKRAG+ IT+ +VD VG D+ R+ + +D D + Sbjct: 368 IGQLVNLVKDGEPVRMSKRAGNIITIDDLVDAVGVDAARYSLARFAADSTIDLDLDLLTS 427 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS------ELQL 498 Q ENPV+YVQYA++R ++ R A + + + F+ S E L Sbjct: 428 QKNENPVYYVQYAHSRTAAVDRNAAE------------RGVARADGFEPSLLDHPTEAVL 475 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLT 556 + LAE+PRV+ A +EP+++A YL LA +H W + + + R + + +T Sbjct: 476 LGRLAEFPRVVGEAAALREPHRVARYLEALAGDYH-SWYQAKDADGAQRRVLPYPDEPVT 534 Query: 557 ---MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L AV ++ +GL ++GV +P M Sbjct: 535 DTHRTRLWLNDAVRQVLANGLGLLGVSAPERM 566 >gi|226307411|ref|YP_002767371.1| arginyl-tRNA synthetase [Rhodococcus erythropolis PR4] gi|259511654|sp|C1A1Z7|SYR_RHOE4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|226186528|dbj|BAH34632.1| arginyl-tRNA synthetase [Rhodococcus erythropolis PR4] Length = 550 Score = 316 bits (809), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 186/582 (31%), Positives = 299/582 (51%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + L+ + ++ +L + + +ERPR+ HG +TN AM +++ +G +P Sbjct: 4 ADLAELLRGTAASVLADRGLDVSVLPETLTVERPRNPEHGDYATNIAMQVAKKVGTNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A I + ++S IAG GF+N+ L I+ S++ +G YG G K+ Sbjct: 64 LAGWIAEALTAADGIESAEIAGPGFLNIRLDKDAQGAIVVSVLEAGSSYGSGDSLAGKKI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L +++ G VTREYY ND GAQI+ + S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRILSAQGGLVTREYYFNDHGAQIDRFSRSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + + K +++ P ++ + V+ M Sbjct: 184 AAKG------EPAPEDGYAGAYIADIAASVL-KQRPDVMELPADEQQETFRAIGVELMFT 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L + D++ E+ + + +++L G ++ Sbjct: 237 HIKQTLHDFGVDFDVYFHENSLF--ESGAVEKAVESLKGSGNLFH--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 + +ST GDD DR ++KSDG+ Y A D+AYF+ K RGFD IY++G+DH GY Sbjct: 280 -EDGAWWLKSTDYGDDKDRVVIKSDGNAAYIAGDIAYFQNKRARGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA + + VL+ ++V L +DG +KMSKRAG ITL +V+ +G D+ R Sbjct: 339 IGRLKAAAAAFGDDPDTVEVLIGQMVNLVKDGTAVKMSKRAGTVITLDDLVEAIGVDASR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 ++M+ +D D + S ENPV+YVQYA+AR +I R A D+ D Sbjct: 399 YVMIRSSVDSSIDIDLDLWTKTSSENPVYYVQYAHARLSAIARNAADLGLSADASNLALL 458 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + QE + LI + EYPRV+ +A +EP+++A YL +LA +H + R P Sbjct: 459 TVEQEGD-------LIRTIGEYPRVVSSAANLREPHRIARYLEELAGAYHRFYGACRILP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + RL L A ++ +GL ++GV +P +M Sbjct: 512 Q---GDEDATDVHRARLALCAATRQVLANGLELLGVTAPEQM 550 >gi|53724623|ref|YP_101930.1| arginyl-tRNA synthetase [Burkholderia mallei ATCC 23344] gi|76812104|ref|YP_332006.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 1710b] gi|121601263|ref|YP_994392.1| arginyl-tRNA synthetase [Burkholderia mallei SAVP1] gi|124385045|ref|YP_001027962.1| arginyl-tRNA synthetase [Burkholderia mallei NCTC 10229] gi|126448815|ref|YP_001081819.1| arginyl-tRNA synthetase [Burkholderia mallei NCTC 10247] gi|167001851|ref|ZP_02267643.1| arginine--tRNA ligase [Burkholderia mallei PRL-20] gi|167917308|ref|ZP_02504399.1| arginyl-tRNA synthetase [Burkholderia pseudomallei BCC215] gi|217419591|ref|ZP_03451097.1| arginine--tRNA ligase [Burkholderia pseudomallei 576] gi|238562825|ref|ZP_00439796.2| arginine--tRNA ligase [Burkholderia mallei GB8 horse 4] gi|254176934|ref|ZP_04883591.1| arginyl-tRNA synthetase [Burkholderia mallei ATCC 10399] gi|254202041|ref|ZP_04908405.1| arginyl-tRNA synthetase [Burkholderia mallei FMH] gi|254259734|ref|ZP_04950788.1| arginine--tRNA ligase [Burkholderia pseudomallei 1710a] gi|254359822|ref|ZP_04976093.1| arginyl-tRNA synthetase [Burkholderia mallei 2002721280] gi|81605730|sp|Q62MY7|SYR_BURMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|109894976|sp|Q3JWP7|SYR_BURP1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|166232764|sp|A3MNI3|SYR_BURM7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|166232765|sp|A2S7P3|SYR_BURM9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|166232766|sp|A1V839|SYR_BURMS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|52428046|gb|AAU48639.1| arginyl-tRNA synthetase [Burkholderia mallei ATCC 23344] gi|76581557|gb|ABA51032.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 1710b] gi|121230073|gb|ABM52591.1| arginyl-tRNA synthetase [Burkholderia mallei SAVP1] gi|124293065|gb|ABN02334.1| arginine--tRNA ligase [Burkholderia mallei NCTC 10229] gi|126241685|gb|ABO04778.1| arginine--tRNA ligase [Burkholderia mallei NCTC 10247] gi|147747935|gb|EDK55011.1| arginyl-tRNA synthetase [Burkholderia mallei FMH] gi|148029036|gb|EDK86968.1| arginyl-tRNA synthetase [Burkholderia mallei 2002721280] gi|160697975|gb|EDP87945.1| arginyl-tRNA synthetase [Burkholderia mallei ATCC 10399] gi|217396895|gb|EEC36911.1| arginine--tRNA ligase [Burkholderia pseudomallei 576] gi|238521851|gb|EEP85299.1| arginine--tRNA ligase [Burkholderia mallei GB8 horse 4] gi|243062445|gb|EES44631.1| arginine--tRNA ligase [Burkholderia mallei PRL-20] gi|254218423|gb|EET07807.1| arginine--tRNA ligase [Burkholderia pseudomallei 1710a] Length = 594 Score = 315 bits (808), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 202/611 (33%), Positives = 318/611 (52%), Gaps = 65/611 (10%) Query: 11 LKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 L+N +K++ K + +L I +ERP+ AHG ++ N A+ L++PLG +P +AE Sbjct: 13 LENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQLAEQ 72 Query: 68 IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 IVA + P+ VD+ IAG GFINL L+P+ + ++ +++ G +G + +V Sbjct: 73 IVAALTAQPEAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVLAQGRAFGASERDHDKRV 132 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA+S Sbjct: 133 LLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAISTQA 192 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPIVKDYS 237 R + L D+ PE Y G Y+ + G+ +A + + + L ++ ++ Sbjct: 193 R-ARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRDVEDLEAIRKFA 251 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 V + + DLKA ++ D + E + + +D L G YE Sbjct: 252 VTYLRREQDMDLKAFGVKFDQYYLESSLY--TEGRVEKTVDALIAAGMTYE--------- 300 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 L R+T GDD DR + K+DG+YTYF D+AY K+ERGF +I + G Sbjct: 301 -------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVINIQG 353 Query: 358 SDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV- 414 SDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+R ++ Sbjct: 354 SDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVRDLIE 413 Query: 415 ----------------DEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454 DE G D+VRF ++ RK FD +Q+ ENPV+YV Sbjct: 414 WSGGATPGSEGSPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYV 473 Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514 QYA+AR S+ + K + D L ++ P +S+ + L+ LAEYP V+ +A Sbjct: 474 QYAHARICSVINEWKSRYGATDALLPGADLSPLDSK---QAMALMQKLAEYPDVLAHAAG 530 Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 P+ +AFYL +LAS FH ++ R V + + R+ L+ A ++ +GL Sbjct: 531 ELAPHAVAFYLRELASEFHSFYNAER-------VLVDEQAPRTARVALLAATRQVLENGL 583 Query: 575 NIIGVESPNEM 585 ++GV +P++M Sbjct: 584 AMLGVSAPSKM 594 >gi|170729360|ref|YP_001774793.1| arginyl-tRNA synthetase [Xylella fastidiosa M12] gi|238687898|sp|B0U1H9|SYR_XYLFM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|167964153|gb|ACA11163.1| Arginine--tRNA ligase [Xylella fastidiosa M12] Length = 562 Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 187/563 (33%), Positives = 295/563 (52%), Gaps = 42/563 (7%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 V+ERP+ HG +TN AM+LS+ G +P +A+ +VA + D+ + IAG GFIN + Sbjct: 32 VVERPKTRKHGDFATNVAMLLSKATGSNPRLLAQTLVAALPTSADIARIEIAGPGFINFH 91 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 + P + +++ +YGRNL G+ V +E+VSANPTGP+HVGH R A +GD LA Sbjct: 92 MHPVAYQHETINVLKQDNDYGRNLSGQSRTVGVEYVSANPTGPLHVGHGRAAAIGDCLAR 151 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211 L+ +G+ V RE+Y NDAG QI+ L SV R + L D+ P Y G Y+ + K Sbjct: 152 LLEANGWNVKREFYYNDAGVQIDNLVRSVQAR-ARGLKPGDALWPTDAYNGEYIADIAKA 210 Query: 212 -------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 + D + N + + ++V + DL A N+ DI+ E Sbjct: 211 YLAGDSINMVDTIITSTKNVDDTA---AIHHFAVNYLRNEQNHDLAAFNVDFDIYFLESS 267 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 ++ + + + L G+ YE + L +ST GDD DR + Sbjct: 268 LYK--DGKVEETVQKLINSGHTYE----------------EGGALWLKSTHFGDDKDRVM 309 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQIN 382 KSDGSYTYF D+AY K++RG++ I +G+DH G + R+ A A + Sbjct: 310 RKSDGSYTYFVPDIAYHLSKWQRGYERAITELGADHHGSLARVHAGLQALEIGIPPGWPE 369 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 +L ++V + R G +K+SKR+G ++TLR +++E +D+ R+ ++ RK L FD Sbjct: 370 YVLHQMVTVMRGGEEVKLSKRSGGYVTLRDLIEETSTDATRWFLIARKPDSQLTFDIDLA 429 Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 +++S +NPVFYVQYAYAR S+ QA + +L++D + + D + L L++ + Sbjct: 430 RQKSNDNPVFYVQYAYARVCSLMHQAHE--KNLNYDQ-TSGMASLDQLSDNTSLCLMIEI 486 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 + YP +++ A EP+ +A YL +LA FH W H V N +L L Sbjct: 487 SRYPEIVQIACELLEPHLIAQYLRELAHAFHT-WYHNTP------VLVENAVERNAKLTL 539 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 A ++ +GLN++GV +P +M Sbjct: 540 ACATRQVLANGLNLLGVGTPEKM 562 >gi|38233629|ref|NP_939396.1| arginyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129] gi|81401545|sp|Q6NHU6|SYR_CORDI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|38199889|emb|CAE49555.1| arginyl-tRNA synthetase [Corynebacterium diphtheriae] Length = 550 Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 186/583 (31%), Positives = 310/583 (53%), Gaps = 38/583 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD S +K ++ +++ +L + +V+ERPR+ HG +TN A+ +++ +G++P Sbjct: 4 ADLSQLIKQTAIDVLSARELDTTVLPETVVVERPRNPEHGDYATNVALQIAKKVGMNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 + +++ + + +D IAG GFIN+ L+ + +I++ I+ +G +G + + +G +V Sbjct: 64 LGQVLADSLAANTAIDEASIAGPGFINIRLAAAAQGEIVAKILEAGATFGHSDLYQGRRV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++ SG +VTREYY ND G QI+ S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAQVTREYYFNDHGRQIDRFTNSLVA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+K + + ++ ++L E + V+ M Sbjct: 184 SAK------GEPTPEDGYGGDYIKEIADAVVAQHP-DVLALAEADLNERFRATGVEMMFA 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I++ L D++ E+ + + I L G +Y Sbjct: 237 HIKESLHEFGTDFDVYFHENSLF--ESGAVDKAIQTLKDNGNLY---------------- 278 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 + +S+ GDD DR ++KSDG Y A D+AY K++RG D IY++G+DH GY Sbjct: 279 FNEGAWWLKSSEYGDDKDRVVIKSDGDAAYIAGDIAYVADKFDRGHDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL A AAA+ + + + VL+ ++V L RDG ++MSKRAG ITL +V+ +G D R Sbjct: 339 ISRLRAAAAAMGYEPSNVEVLIGQMVNLVRDGKAVRMSKRAGTVITLDDLVEAIGIDGAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPR 482 + M+ LD D ++QS +NPV+YVQY +AR SI R+A D+ +D DL Sbjct: 399 YSMIRSSVDSSLDIDLQLWEQQSSDNPVYYVQYGHARLCSIARKAADLGITAIDPDL--- 455 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 +++ + E D LI L E+P V++ A +EP+++A + DLA FH + + Sbjct: 456 SLLTHDREGD-----LIRTLGEFPAVVKAAAELREPHRIARFAEDLAGTFHRFYDSCQIL 510 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P+ V + + RL L +A ++ + L ++GV +P M Sbjct: 511 PK---VGESAEPIHTARLALANATRQVLANALRLVGVSAPERM 550 >gi|254774331|ref|ZP_05215847.1| arginyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC 25291] Length = 550 Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 196/591 (33%), Positives = 301/591 (50%), Gaps = 54/591 (9%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + L+N + + ++ L +V+ERPR+ HG ++N A+ L + +G +P Sbjct: 4 ADLAELLRNTAAAVLAERGLDAAALPATVVVERPRNPEHGDYASNLALQLGKKVGANPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + A + + S +AG GFINL L S ++++++ +G YG + + Sbjct: 64 LAGWLAAALAETDGIASAEVAGPGFINLRLEASAQAVVVTNVLDAGDRYGHSDAQSTHNI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L++ G V REYY ND GAQI+ A S+ Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGAGVVREYYFNDHGAQIDRFASSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + ++ + + + L+ PE + + V M Sbjct: 184 AAK------GEPTPEDGYAGSYINDIAAQVL-RQAPDALSLPEPQLRETFRAIGVDLMFT 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I++ L D++ ED H + I L G +YE K T Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMHTS--GRVDQAIARLRETGNIYE------KDGAT---- 284 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 R++ GDD DR ++KSDG Y A D+AY+ K +RGFD IY++G+DH GY Sbjct: 285 ------WLRTSAFGDDKDRVVIKSDGKPAYIAGDIAYYLDKRQRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+AVAAA + A + VL+ ++V L RDG P++MSKRAG ITL +V+ +G D+ R Sbjct: 339 IARLKAVAAAFGDDPAAVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D + S ENPV+YVQYA+AR ++ R A ++ Sbjct: 399 YSLIRSSVDTPIDIELALWSSASNENPVYYVQYAHARLSALARNAAEL-----------G 447 Query: 484 VIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 +IP DT+ L+L+ H L E+PRV++ A +EP+++ YL DLA +H Sbjct: 448 LIP-----DTAHLELLSHDKEGTLLRTLGEFPRVLKTAASLREPHRVCRYLEDLAGDYHR 502 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R P+ L RL L A +I +GL I+GV +P M Sbjct: 503 FYDSCRVLPQ---GDEQPTDLHTARLALCQATRQVIANGLAILGVTAPERM 550 >gi|329894770|ref|ZP_08270571.1| Arginyl-tRNA synthetase [gamma proteobacterium IMCC3088] gi|328922759|gb|EGG30092.1| Arginyl-tRNA synthetase [gamma proteobacterium IMCC3088] Length = 558 Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 195/574 (33%), Positives = 303/574 (52%), Gaps = 49/574 (8%) Query: 24 VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83 ++K + I IER RD +HG ++N A+ +++ GL+P +AE I+A + D +D I Sbjct: 22 LQKDSVGAIQIERTRDPSHGDFASNIALAMAKKAGLNPRQLAEKIIAALPADKALDRCEI 81 Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143 AG GFIN +LS S +++SI+ G +G N +G +V IEFVSANPTGP+HVGH R Sbjct: 82 AGPGFINFFLSKSASTSVIASILEQGAAFGTNALGNNQRVQIEFVSANPTGPLHVGHGRG 141 Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203 A VGDTL+ L+ GY V RE+Y NDAGAQI+ LA SV R + L + + P+ Y G Sbjct: 142 AAVGDTLSRLLQACGYRVDREFYYNDAGAQIDHLARSVQARC-EGLDPSSPEWPQDGYRG 200 Query: 204 VYLKHVGKELADKY-----SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y+ + K DK E+ + + +++++V + + DLKA ++ D Sbjct: 201 EYIVDLAKAFQDKAVIQAEDREVAASGDIGDIDAIREFAVAYLRREQDLDLKAFGVEFDY 260 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + E + + D ++ L G+ YE D L + GD Sbjct: 261 YFLESSLYA--SGAVDDTVERLRDNGFTYE----------------DDGALWLNTEAFGD 302 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR----LEAVAAAV 374 D +R + K +G YTYF D+AY K+ RG+D +I G+DH V R L+A+ A + Sbjct: 303 DKNRVMRKREGGYTYFVPDVAYHLNKWNRGYDVVINEQGADHHSTVTRVRAGLQALKAGI 362 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434 E + +L ++V + R+G +K+SKRAG ++TLR +VDEVG D+ R+ ++ R S Sbjct: 363 PEGWPEY--VLHQMVLVMRNGEEVKLSKRAGSYVTLRDLVDEVGRDATRYFLVARAPSSQ 420 Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494 L FD QS ENPV+Y+QYA+AR S+ + + P + + S Sbjct: 421 LTFDIDLALSQSNENPVYYIQYAHARICSMLNKLANT---------PSASVSDAALAALS 471 Query: 495 ELQ---LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551 E Q LI L ++P V++ A + P+ +A +L DLA+ FH ++ + V + Sbjct: 472 EPQEEALIKELDKFPEVVKQAGQQRAPHMIANFLKDLAAAFHTFYNAHK-------VLVD 524 Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R+ L A ++ +GL+I+GV +P M Sbjct: 525 DATTQEARVALCLATQHVLQNGLDILGVSAPESM 558 >gi|118619176|ref|YP_907508.1| arginyl-tRNA synthetase [Mycobacterium ulcerans Agy99] gi|166232812|sp|A0PUL8|SYR_MYCUA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|118571286|gb|ABL06037.1| arginyl-tRNA synthetase ArgS [Mycobacterium ulcerans Agy99] Length = 550 Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 198/591 (33%), Positives = 301/591 (50%), Gaps = 54/591 (9%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LK + + ++ L + +V+ERPR+ HG ++N A+ L++ +G +P Sbjct: 4 ADLAELLKTTATAVLSEHALDTSALPQTVVVERPRNPEHGDYASNVALQLAKKVGANPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A IV + + S +AG GFINL L S KI+++I+ +G +G + + KV Sbjct: 64 LAGWIVEALTKADGIASAEVAGPGFINLRLETSAQAKIVNAIIDAGSGFGHSELMAAHKV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L++ G +V REYY ND GAQI+ A S+ Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGADVVREYYFNDHGAQIDRFANSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + P+ Y G Y+ + + K + + L+ P+ + ++ V M Sbjct: 184 AAKG------EPTPDDGYAGSYINDIAARVLQK-APDALSLPDAQMHETFREIGVDLMFS 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I++ L D++ ED H + + L G +YE K T Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMH--STGRVDQAVARLRETGNIYE------KDGAT---- 284 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 RS+ GDD DR ++KSD Y A DLAY+ K ERGFD IY++G+DH GY Sbjct: 285 ------WLRSSSFGDDKDRVVIKSDDKPAYIAGDLAYYLDKRERGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA E + VL+ ++V L RDG P++MSKR G ITL +V+ +G D+ R Sbjct: 339 IARLKAAAAAFGEDPGTVEVLIGQMVNLVRDGQPVRMSKRTGTVITLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D S ENPV+YVQYA+AR ++ R A ++ Sbjct: 399 YSLIRSSVDTPIDIDLALWSSASNENPVYYVQYAHARLSALARNAAEL-----------G 447 Query: 484 VIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 +IP DT L+L+ H L ++PR+++ A +EP+++ YL DLA +H Sbjct: 448 LIP-----DTDHLELLSHEKEGVLLRTLGDFPRMLKAAASLREPHRVCRYLEDLAGDYHR 502 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R P+ +L RL L A I +GL I+GV +P M Sbjct: 503 FYDSCRVLPQ---GDEEPTQLHTARLALCQATRQAIANGLGILGVTAPERM 550 >gi|305682134|ref|ZP_07404938.1| arginine--tRNA ligase [Corynebacterium matruchotii ATCC 14266] gi|305658607|gb|EFM48110.1| arginine--tRNA ligase [Corynebacterium matruchotii ATCC 14266] Length = 550 Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 185/556 (33%), Positives = 290/556 (52%), Gaps = 35/556 (6%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 +++V+ERPR+ HG +TN A+ +++ +G++P +A L+V + ++ +V IAG GFI Sbjct: 30 EQVVVERPRNPEHGDYATNLALQIAKKVGMNPRELAGLLVDALSAHDEIATVDIAGPGFI 89 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N+ L+ + +I++ I+ +G YG N + G ++N+EFVSANPTGP+H+G R A VGD+ Sbjct: 90 NIRLAAAAQGQIVADILAAGTTYGHNSLYSGERINLEFVSANPTGPVHLGSTRWAAVGDS 149 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 L ++A G +VTREYY ND G QI+ S+ + +PE Y G Y+ + Sbjct: 150 LGRILAACGADVTREYYFNDHGRQIDRFTNSLIAAAK------GQPVPEDGYGGDYISEI 203 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 + + +L E + V+ M I+ L + D++ E+ + Sbjct: 204 AANIVAQEPG-VLQQSEPDMRETFRALGVELMFDHIKATLHEFGVDFDVYFHENSLF--E 260 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + +D L G +Y RST GDD DR ++KSDG Sbjct: 261 SGAVDRAVDKLKENGNLY----------------FSNGAWWLRSTNYGDDKDRVVIKSDG 304 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 Y A D+AY K+ERG IY++G+DH GY+ RL A AAA+ + VL+ +LV Sbjct: 305 DAAYIAGDIAYVANKFERGHTRSIYMLGADHHGYISRLRAAAAAMGYNPNNVEVLIGQLV 364 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 L RDG ++MSKRAG ITL +V+ +G D+ R+ ++ LD D QS EN Sbjct: 365 NLVRDGEAVRMSKRAGTIITLDDLVEAIGIDAARYSLVRSSVDSTLDIDLTLWANQSNEN 424 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 PV+YVQYA+AR S+ ++A + +D P + E E LI L EYP V+ Sbjct: 425 PVYYVQYAHARLCSLAKKAAAVGVTVD---NPDLSLLTEDH----EGTLIRTLGEYPTVV 477 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 + A +EP+++A Y+ +LA FH + + P+ + + RL L A + Sbjct: 478 KAAAELREPHRIARYIEELAGTFHRFYDTCQILPK---AGEQAQPIHTARLALATATRQV 534 Query: 570 INSGLNIIGVESPNEM 585 I + L ++GV +P +M Sbjct: 535 IANALGLLGVTAPEQM 550 >gi|312621722|ref|YP_004023335.1| arginyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002] gi|312202189|gb|ADQ45516.1| arginyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002] Length = 561 Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 201/558 (36%), Positives = 314/558 (56%), Gaps = 36/558 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90 I+IE+P++ +HG +TN AM L+R L +P IA IV+ I + ++ V +AG GFIN Sbjct: 36 IMIEKPKEKSHGDFATNIAMELTRKLKKNPREIANGIVSAIDLSNTFIEKVEVAGPGFIN 95 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + +L K++ I+ G +YG+ IG G KV +EFVSANPTGPMH+G+ R +GD L Sbjct: 96 FFFRKDWLYKVVDVILTEGDDYGKVNIGNGKKVMVEFVSANPTGPMHMGNARGGALGDCL 155 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+L+ ++GY VT+E+Y+NDAG QI S+ RY+Q L + DLPE Y G + Sbjct: 156 ANLLKWAGYNVTKEFYVNDAGNQIEKFGQSLEIRYRQ-LKGENIDLPEDCYHGEDIIERV 214 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 KE D++ +L N ++ + D++++ + ++++ L+ I++D++ E + + Sbjct: 215 KEYLDEHGDDLENLSSDERRKKLVDFALKRNILLMKEHLRKYGIEYDVWFHESSLY--ES 272 Query: 271 SPIRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 + + I++L +GY YE G L SK + D L++++ Sbjct: 273 GEVFETIEDLKSRGYTYEKDGALWFAASKIDESLK-----------------DEVLIRAN 315 Query: 329 GSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387 G TYFAAD+AY + K+E RGFD +I + G+DH G+V R++A A+ ++ V+L + Sbjct: 316 GIPTYFAADIAYHRNKFEKRGFDIVIDIWGADHHGHVARMKAAMKALGIDPEKLIVILMQ 375 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 LVRL R ++MSKR G ITL ++DE+G D+ RFM + ++ D V +Q+ Sbjct: 376 LVRLVRGKEVVRMSKRTGKAITLIDLIDEIGKDAARFMFNTKSADTHIEIDLDLVTQQTL 435 Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 +NPVFYVQYA+AR I R + LD ++ I E EL+L+ L E P Sbjct: 436 DNPVFYVQYAHARTCGIIRALSEEGIVLD-----KSRIKVELLQQEEELELLRKLLELPE 490 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 IE A + ++ YL DLAS+FH ++ R V+ N +L RL LV V Sbjct: 491 EIEIAARNLDVSRVTKYLLDLASMFHAFYNACR-------VKNENEELMFTRLSLVECVR 543 Query: 568 SIINSGLNIIGVESPNEM 585 +IN+ L ++GVE+P +M Sbjct: 544 IVINNMLRLLGVEAPEKM 561 >gi|119474652|ref|ZP_01615005.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2143] gi|119450855|gb|EAW32088.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2143] Length = 580 Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 203/570 (35%), Positives = 306/570 (53%), Gaps = 33/570 (5%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 RI ++R RD +HG L++N AM L++ P IA+LI+ + V IAG GFIN Sbjct: 29 RISVDRTRDKSHGDLASNIAMTLAKAAKKPPKDIAQLIINALPASTQVSKAEIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL+ + ++ I+ G YGR GKG KV +EFVSANPTGP+HVGH R A VGD++ Sbjct: 89 FYLNEAAAAAVVIDILSQGKNYGRCNDGKGKKVQVEFVSANPTGPLHVGHGRGAAVGDSI 148 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV- 209 L+ +G++VT E+Y NDAG QI+ LA SV R + L D PE Y G Y+ V Sbjct: 149 CRLLDAAGWDVTAEFYYNDAGQQISNLAGSVQARC-KGLGPGDESWPEDGYQGSYINDVA 207 Query: 210 ----GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 KE D ++ + L + D++V + + DLKA + D++ E Sbjct: 208 NSYMAKEKIDAEDKHVVGAGDADNLEAISDFAVAYLRREQDLDLKAFGVDFDVYYLESSL 267 Query: 266 HRGDPSPIRDIIDNLARQGYVY--EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD-VDR 322 + + + D + L G+ Y EG L KTT D D+ +++ +S +V D V Sbjct: 268 Y--NEGKVADTVQQLINSGHTYEKEGAL---WLKTTDFGD-DKDRVMRKSGVVETDPVSG 321 Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 + +G YTYF D+AY K++RGF+ ++ G+DH + R+ A AVS+ +N Sbjct: 322 NETRKEGGYTYFVPDVAYHLNKWQRGFERVVNEQGADHHSTITRVRAGIQAVSQHN-HLN 380 Query: 383 V-------LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435 + +L ++V + R G +K+SKRAG +IT+R +VDEVG D+ R+ + R + L Sbjct: 381 IPQQWPEYVLHQMVMVMRGGEEVKISKRAGSYITIRDLVDEVGKDATRYFLAARAANSQL 440 Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495 FD QS +NPV+Y+QYA+AR S+ R+ D L N E + +E Sbjct: 441 TFDIDLAISQSNDNPVYYIQYAHARVCSMMRKLSDHQWSWSAKL---NSNTLEHLVEDAE 497 Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555 L+ L+ YP +I+NA I EP+ +A YL +LA +H ++ N V ++ L Sbjct: 498 KALMKKLSGYPELIKNAAIHSEPHTVANYLRELAGDYHSYY-----NAHKTLV--DDDDL 550 Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L +V +I +GL+++GV +P EM Sbjct: 551 RNARLSLSESVRQVIENGLSLLGVSAPAEM 580 >gi|254207373|ref|ZP_04913724.1| arginyl-tRNA synthetase [Burkholderia mallei JHU] gi|147752915|gb|EDK59981.1| arginyl-tRNA synthetase [Burkholderia mallei JHU] Length = 578 Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 198/591 (33%), Positives = 309/591 (52%), Gaps = 62/591 (10%) Query: 28 ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFI 83 +L I +ERP+ AHG ++ N A+ L++PLG +P +AE IVA + P+ VD+ I Sbjct: 17 VLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQLAEQIVAALTAQPEAAGLVDAAEI 76 Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143 AG GFINL L+P+ + ++ +++ G +G + +V +EFVSANPTGP+HVGH R Sbjct: 77 AGPGFINLRLTPASKQAVIGAVLAQGRAFGASERDHDKRVLLEFVSANPTGPLHVGHGRQ 136 Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203 A +GD LA+++A GY V RE+Y NDAG QI LA+S R + L D+ PE Y G Sbjct: 137 AALGDALANVLASQGYAVHREFYYNDAGVQIGNLAISTQAR-ARGLKPGDAGWPEAAYNG 195 Query: 204 VYLKHV------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257 Y+ + G+ +A + + + L ++ ++V + + DLKA ++ D Sbjct: 196 EYIADIARDYLNGETVAASDGEPVTGKRDVEDLEAIRKFAVTYLRREQDMDLKAFGVKFD 255 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 + E + + +D L G YE L R+T G Sbjct: 256 QYYLESSLY--TEGRVEKTVDALIAAGMTYE----------------QEGALWLRTTDEG 297 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VS 375 DD DR + K+DG+YTYF D+AY K+ERGF +I + GSDH G + R+ A + Sbjct: 298 DDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVINIQGSDHHGTIARVRAGLQGLHIG 357 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV-----------------DEV- 417 K + +L ++V + RDG +K+SKRAG ++T+R ++ DE Sbjct: 358 IPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVRDLIEWSGGATPGSEGSPELLDEAT 417 Query: 418 ---GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 G D+VRF ++ RK FD +Q+ ENPV+YVQYA+AR S+ + K + Sbjct: 418 ITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYVQYAHARICSVINEWKSRYGA 477 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 D L ++ P +S+ + L+ LAEYP V+ +A P+ +AFYL +LAS FH Sbjct: 478 TDALLPGADLSPLDSK---QAMALMQKLAEYPDVLAHAAGELAPHAVAFYLRELASEFHS 534 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ R V + + R+ L+ A ++ +GL ++GV +P++M Sbjct: 535 FYNAER-------VLVDEQAPRTARVALLAATRQVLENGLAMLGVSAPSKM 578 >gi|289548074|ref|YP_003473062.1| arginyl-tRNA synthetase [Thermocrinis albus DSM 14484] gi|289181691|gb|ADC88935.1| arginyl-tRNA synthetase [Thermocrinis albus DSM 14484] Length = 551 Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 189/565 (33%), Positives = 300/565 (53%), Gaps = 36/565 (6%) Query: 26 KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85 K ++ +E PR G L+TN A ILS+ L +P IA+ + A + D+ A Sbjct: 18 KTEVEEFQVEPPRQEELGDLATNVAFILSKTLRRNPQEIAQYL-ANLLSQHGFDAT--AQ 74 Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 +GFIN+ + S ++++ I+ G + +G+G ++ +E VSANPTGP+H+GH R AV Sbjct: 75 RGFINIRILESTVKEMTKQILQEGESFFLEKVGEGKRILVELVSANPTGPLHLGHGRIAV 134 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL----PEGYY 201 VGD +A L+ G++VTREYYINDAG Q+ L LS+ +R + + D+ E Y Sbjct: 135 VGDVIARLLTAFGFDVTREYYINDAGRQVYLLGLSILYRCLEMTGRDPEDIRPTFEEEGY 194 Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 G Y+ + KE Y EL E+ + + ++ +++ I L L++ D + S Sbjct: 195 KGTYVMDLAKEALQTYGEELFKGDREETIRTLSQLGIRKILEEISQTLSKLDVSIDSWFS 254 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E + + +++ L +GY+YE + F+ST+ GDD D Sbjct: 255 ERSLV--EEGRVEEVLSVLQEKGYLYE----------------KDGAIWFKSTLFGDDKD 296 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381 R L KS G YTYFA D+AY KY+RG+ ++ V G+DH GY+ RL A+ + Sbjct: 297 RVLRKSTGEYTYFATDIAYHYEKYKRGYQQVVNVWGADHHGYLPRLVGALRALGIPDQWL 356 Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441 V ++VRL++ ++MSKRAG+F+TL +++EVG D+VRF+ L R++ LDFD Sbjct: 357 RVEWVQMVRLFKGEEEVRMSKRAGEFVTLEELMEEVGKDAVRFIFLTRRSDTPLDFDIQL 416 Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFP-DLDFDLFPRNVIPQESEFDTSELQLIV 500 E+S ENPVFYVQYA+AR R +FR+ K + D D ++ E + + Sbjct: 417 ALEKSSENPVFYVQYAHARIRGVFREVKTRYGIDPDNAGLGEHIQNLRDEAGVKLCKKCI 476 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 L + + +A P+ + +L + A FH +++H R V +R+L + RL Sbjct: 477 FLKD---TLWDAVSKLAPHIITSWLIETAKDFHNYYNHHR-------VMVEDRELMLSRL 526 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 ++ V + + LN+IGV +P M Sbjct: 527 AVLKTVEISLKTALNLIGVSAPERM 551 >gi|119505532|ref|ZP_01627604.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2080] gi|119458641|gb|EAW39744.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2080] Length = 564 Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 189/567 (33%), Positives = 303/567 (53%), Gaps = 51/567 (8%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 ++ +D +HG L+TN AM+LS+ G P +A I+ + + + IAG GFIN +L Sbjct: 34 VDHTKDASHGDLATNLAMVLSKKAGKAPRDLAAAIIEALPTNDLISKTEIAGPGFINFFL 93 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + + +++ SI+ SG ++G + G G + +EFVSANPTGP+HVGH R A +GD+L+ L Sbjct: 94 NQASNVEVIRSILNSGPKFGTSDKGAGRRAQVEFVSANPTGPLHVGHGRGAAIGDSLSRL 153 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + +G+ V RE+Y NDAG QI LA SV R Q L D D PE Y G Y+ +L Sbjct: 154 LEATGWSVHREFYYNDAGQQIANLARSVQAR-AQGLTPEDPDWPEDGYRGTYI----VDL 208 Query: 214 ADKYSSELLNFPEEKW---------LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 A Y +++ ++ L ++D++V + + DLKA +Q D + E Sbjct: 209 ATAYQNKITVSAADRTITALGDVDNLAAIRDFAVAWLRREQDLDLKAFGVQFDEYFLESA 268 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 + + + D + L R G+ YE + L R++ GDD DR + Sbjct: 269 LY--ESGEVTDTVTALERAGHTYE----------------EGGALWLRTSDFGDDKDRVM 310 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--KAQIN 382 K G YTYF D+AY K++RGF+ +I G+DH + R+ A +++ + Sbjct: 311 RKKGGEYTYFVPDVAYHFNKWQRGFERVINEQGADHHSTITRVRAGLQGLAKDIPEGWPE 370 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 +L ++V + RDG +K+SKRAG ++TLR +++ VG D+ RF + R S L FD Sbjct: 371 YVLHQMVTVMRDGTEVKLSKRAGSYVTLRDLIEWVGKDATRFFLAARSASSQLTFDIDLA 430 Query: 443 KEQSKENPVFYVQYAYARCRSIFRQA----KDIFPDLDFDLFPRNVIPQESEFDTSELQL 498 QS ENPVFY+QYA+AR S+ R+A D P D ++ + EL L Sbjct: 431 LAQSNENPVFYIQYAHARVCSVKRKALSEGSDWTPQAGLDHL-------DTLTSSEELAL 483 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 + LA++P ++ +A EP+ +A YL ++A+ FHG ++ + + +N+ ++ Sbjct: 484 ALLLAKFPEIVASAAQRLEPHDIANYLREVAAAFHGLYN------AHKLIDEDNKNQSLG 537 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 R+ L A +I +GL+++GV +P M Sbjct: 538 RISLAEATRQVIANGLDLLGVSAPESM 564 >gi|189485731|ref|YP_001956672.1| arginyl-tRNA synthetase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287690|dbj|BAG14211.1| arginyl-tRNA synthetase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 552 Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 205/591 (34%), Positives = 309/591 (52%), Gaps = 58/591 (9%) Query: 10 RLKNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA-E 66 ++K+ LK I K K I R+ +E P + NAAM++++ + ++P T+A E Sbjct: 5 KIKDSLKVIIAKYLQGKGITGRLNFTLEIPPRNIDADFAFNAAMLIAKKVKINPRTVAQE 64 Query: 67 LIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 LI +K P+ ++ IAG GFINL + L K L +I+ +YG K+ + Sbjct: 65 LIDITVKEIPELIEKAEIAGAGFINLRIKNEILYKELETILREKDKYGSFPENNKEKILV 124 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+H+GH R A +GD++ ++ GY+V +EYY+ND G Q+ L+ SV R+ Sbjct: 125 EFVSANPTGPLHIGHGRGAAIGDSIVRILKHLGYDVIKEYYLNDYGNQMLVLSKSVEIRF 184 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKEL-ADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 +Q L D P +Y G Y+ + K L ++ + +NF E SV+ ++ Sbjct: 185 RQ-LKGEKIDFPADHYQGSYIIDIAKRLISENRDIDEVNFKYE---------SVKEILSW 234 Query: 245 IRDDLKALNIQHDIFISED----DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 I+DDLK ++ D + SE D + + + + L +G Y Sbjct: 235 IKDDLKDFAVEFDDWFSETKITADKDKNGKTEVDKTCEYLLAKGNAY------------- 281 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + L ST GDD DR L +SDG YTY A+D A+ K K+ERGF + + G+DH Sbjct: 282 ---VKGDALWLASTKFGDDKDRVLKRSDGRYTYLASDAAHHKNKFERGFTKLANLWGADH 338 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GYV R++A + K ++++L + V L R+G+ + MS R G+FITL+ V DEVG D Sbjct: 339 HGYVARIKACVQMLGFDKEALDIILYQFVSLVRNGLSVTMSTRTGEFITLKEVADEVGKD 398 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI------FPD 474 + RF L R ++FD K+QS +NPVFYVQY ARC SI R++K+ + Sbjct: 399 ACRFFFLMRAPDSQIEFDLELAKKQSSKNPVFYVQYVNARCSSIIRESKNRSGITSEIKN 458 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 ++F L E LI LA + + + P+ YL +LA +FH Sbjct: 459 INFSLLNTK----------EERDLIKQLAAFCDTLALSEKTMSPHHFTVYLIELADIFHK 508 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + EN R+ AN LT RL+L+ VA II +GLN++GV P++M Sbjct: 509 FY----ENYRVLTGDAN---LTSARLKLIEGVAIIIKNGLNLLGVSVPDKM 552 >gi|126666725|ref|ZP_01737702.1| arginyl-tRNA synthetase [Marinobacter sp. ELB17] gi|126628770|gb|EAZ99390.1| arginyl-tRNA synthetase [Marinobacter sp. ELB17] Length = 578 Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 193/565 (34%), Positives = 300/565 (53%), Gaps = 48/565 (8%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 I +D +HG + N A++ ++ G P +AE +VA + VD V IAG GFIN ++ Sbjct: 49 IGNTKDKSHGDYACNIALVAAKFAGCAPRKLAEALVANLPASAAVDKVEIAGPGFINFFM 108 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 S + ++++ + ++GRN GKG KV +EFVSANPTGP+HVGH R A +GD + L Sbjct: 109 STASAFGVVNAALEQAEDFGRNHSGKGEKVQVEFVSANPTGPLHVGHGRGAAIGDCICRL 168 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV---- 209 + +GY+VTRE+Y NDAGAQIN L LSV R + L + PE Y G Y+ V Sbjct: 169 LDANGYQVTREFYYNDAGAQINNLGLSVQARV-KGLTPDHQSWPENGYRGDYIADVAEAY 227 Query: 210 --GKEL-ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 GK + AD+ S + E L + +++V + + DLKA ++ D++ E + Sbjct: 228 LAGKTITADERS--VTGQAEPDNLEAITNFAVAYLRREQDLDLKAFGVEFDVYFLESSLY 285 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 + + + L GY YE D L ++T GDD DR + K Sbjct: 286 --NDGKVEATVKRLQENGYTYE----------------DGGALWLKTTEFGDDKDRVMRK 327 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVL 384 +DG YTYF D+AY K++RGF +I G+DH V R+ A A + + + + Sbjct: 328 TDGGYTYFLPDVAYHLDKWQRGFSTVINEQGADHHSTVTRVRAGLQALNIGIPEGWPDYV 387 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L ++V + R G +K+SKRAG ++TL +++EVG D+ RF + R+ L FD + Sbjct: 388 LHQMVMVTRGGEEVKLSKRAGSYVTLSDLIEEVGRDATRFFLAARRVDSQLTFDIDLARS 447 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR----NVIPQESEFDTSELQLIV 500 Q+ ENPV+Y+QYA+AR S+ R+ L + R ++ E +L Sbjct: 448 QTNENPVYYIQYAHARICSVLRK-------LAVEGVQRGRHESLGDLTLLTLDEEKELAN 500 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 LA+YP ++ +A +EP+ L+ YL +LA +FH +++ + V + L R+ Sbjct: 501 QLAKYPELVASAAAQREPHTLSQYLRELAGLFHSYYNAHK-------VLIEDTALRDARI 553 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 L AV +I +GL+++GV +P EM Sbjct: 554 SLYLAVRQVIENGLDLLGVSAPEEM 578 >gi|152965218|ref|YP_001361002.1| arginyl-tRNA synthetase [Kineococcus radiotolerans SRS30216] gi|189083537|sp|A6W7E9|SYR_KINRD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|151359735|gb|ABS02738.1| arginyl-tRNA synthetase [Kineococcus radiotolerans SRS30216] Length = 554 Score = 313 bits (803), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 187/555 (33%), Positives = 296/555 (53%), Gaps = 35/555 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + +ERP++ HG +T+ A+ L++ GL P +A L+ R+ V +V IAG GF+N+ Sbjct: 34 VRVERPKNRDHGDWATSVALQLAKKAGLPPREVAALVQRRLLEVEGVRAVDIAGPGFLNV 93 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + ++ S+V +G +GR+ G ++N+EFVSANPTGP+H+G R A VGD+LA Sbjct: 94 TLDAAAAGELARSVVEAGPAFGRSATPTGERINLEFVSANPTGPIHLGGTRWAAVGDSLA 153 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ +G VTREYY ND GAQI+ A S+ R ND PE Y G Y+ + Sbjct: 154 RVLEAAGATVTREYYFNDHGAQIDRFARSLLAR------ANDEPAPEDGYGGDYVTDIAA 207 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 + + + LL+ P E+ + + V+ M IR L ++ D++ ED H Sbjct: 208 AVLAE-APGLLDLPREEQQEVFRREGVELMFAEIRQSLAEFGVEFDVYFHEDSLHTS--G 264 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + + L G +YE R++ GDD DR ++KSDG Sbjct: 265 AVGRAVQKLRDLGRIYEA----------------DGATWLRTSDFGDDKDRVVIKSDGHP 308 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCELVR 390 Y + DLAY+ K ERGFD + ++G+DH GYV R+ A+ AA + + +L+ ++V Sbjct: 309 AYISGDLAYYLDKRERGFDRCVLMLGADHHGYVPRMMAMCAAFGDTPGVNLEILIGQMVN 368 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L +DG+P++MSKRAG +T+ +V+ VG D+ R+ ++ +D D + +S +NP Sbjct: 369 LLKDGVPVRMSKRAGTVVTMEDLVEAVGVDAARYSLVRSSVDSSIDIDLDLLTRRSNDNP 428 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 VFYVQYA+AR ++ A + D F +++ +E+E L+ LAE+P V+ Sbjct: 429 VFYVQYAHARTANVAVNAAAAGVRRE-DAFDPSLLTEETES-----LLLAALAEFPAVVA 482 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A +EP+++A YL +LA FH + R PR + RL L A ++ Sbjct: 483 RAGELREPHRVARYLEELAGRFHKFYDACRVTPR---AGEEVTDVHRTRLWLNDATRQVL 539 Query: 571 NSGLNIIGVESPNEM 585 +GL ++GV SP+ M Sbjct: 540 ANGLGLLGVSSPDRM 554 >gi|262377144|ref|ZP_06070369.1| arginyl-tRNA synthetase [Acinetobacter lwoffii SH145] gi|262307882|gb|EEY89020.1| arginyl-tRNA synthetase [Acinetobacter lwoffii SH145] Length = 596 Score = 313 bits (803), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 188/597 (31%), Positives = 316/597 (52%), Gaps = 77/597 (12%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 + R +D +HG ++N AMI S+ G+ P +AE I+A + D+ IAG GFIN +L Sbjct: 32 LTRTKDRSHGDFASNIAMIASKAAGMKPRDLAEKILAALPEVADISKAEIAGPGFINFFL 91 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + +L I YGR + ++ +EFVSANPT +HVGH R A G T+A+L Sbjct: 92 NADQRFAVLDQIQAQQATYGRTQVNADKRIQVEFVSANPTSSLHVGHGRGAAYGMTVANL 151 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + +G +V REYY+NDAG Q++ LA S + RY + L + P+ Y G Y+K + + + Sbjct: 152 LEATGAKVDREYYVNDAGRQMDILATSTYLRYLE-LTGQELVFPKNAYQGDYVKEIAQSI 210 Query: 214 AD---------------------KYSSEL--------LNFPEEKWLP------------- 231 D ++++EL L+ +EK + Sbjct: 211 IDQDGDAYVRPVADVYKDVPEDVQFAAELDADGNKVVLSGDKEKHIDGLIFNSQALIGTG 270 Query: 232 --IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 + +++A++ I+DDL + + + SE+ I + + L ++G++YE Sbjct: 271 YRVFLQAALKAILDDIKDDLGEFGVTFNQWFSEESL----TDKIEEALQTLDQRGFLYE- 325 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349 +D + F+ST GD+ DR + + +G TYFA+D+AY K +RG+ Sbjct: 326 --------------LD-GNIWFKSTAFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGY 370 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 ++I + GSDH GY+ R++A A+ ++ VLL + V L+R G ++MS R+G F+T Sbjct: 371 TDIIDIWGSDHHGYIARVKAAIDALGYDSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVT 430 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQA 468 LR + EVG+D+ RF + RK+ + +DFD QSK+N V+Y+QYA+AR CR + + A Sbjct: 431 LRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARICRMLEKAA 490 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 +++FD + + E D +E +++ LA YP ++ A + EP+++ YL +L Sbjct: 491 S---TNVNFDATAARNLAAKLELD-AETEILAKLAAYPEILVRAANSYEPHQIGNYLKEL 546 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A++FHG ++ + V ++ +LT RL L V ++ +GL ++GV +P M Sbjct: 547 AALFHGWYNDNK-------VLGDDAELTQARLLLSVNVRQVLRNGLELLGVSAPESM 596 >gi|56477479|ref|YP_159068.1| arginyl-tRNA synthetase [Aromatoleum aromaticum EbN1] gi|81357403|sp|Q5P3E7|SYR_AZOSE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|56313522|emb|CAI08167.1| Arginyl-tRNA synthetase [Aromatoleum aromaticum EbN1] Length = 587 Score = 313 bits (802), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 203/596 (34%), Positives = 304/596 (51%), Gaps = 79/596 (13%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +ERP+ HG +TN A+ L++PL P +AEL++A + V + +AG GFIN Sbjct: 29 IHLERPKQAGHGDFATNLALQLAKPLRRRPRELAELLLAELPRSTLVAATEVAGAGFINF 88 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+ + +++ G E+GR GT V +EFVSANPTGP+HVGH R A G +LA Sbjct: 89 TLAAGAKTAAVGTVLERGAEFGRG-ARNGTSVQLEFVSANPTGPLHVGHGRGAAYGASLA 147 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ F+G +VTREYYINDAG Q++ LALS + RY ALY D P Y G Y+ + + Sbjct: 148 AVLDFAGSDVTREYYINDAGRQMDILALSTWLRYL-ALYGLDIPFPPNAYQGDYVVDMAR 206 Query: 212 ELADKYSSELLNFPEEK------WLPI--------------------------------- 232 + + + F E+ LP+ Sbjct: 207 AMREGHQDRFAGFTIEQVLEGAPGLPVAERKDDEAKTQREDHLDMLIANAKRLLGEDYHF 266 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 V +++ + RDDL+ + D + SE D + + L ++G+VY Sbjct: 267 VHGFALNEQLGDGRDDLEEFGVHFDKWFSEKSLF--DTGLVDRAVAELEKRGHVY----- 319 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 + FRST GD+ DR + + +G YTYFA+D+AY KYERG+D + Sbjct: 320 -----------LQDGAKWFRSTAFGDEKDRVVQRENGLYTYFASDIAYHLNKYERGYDRI 368 Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412 I + G+DH GY+ R++ AA+ ++ V L + LYR+G MS R+G+F+TLR Sbjct: 369 IDIWGADHHGYIPRVKGAIAALGLPPEKLEVALVQFAVLYRNGQKASMSTRSGEFVTLRE 428 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 + EVG+D+ RF + RK+ + LDFD K QS ENPV+YVQYA+AR S+ Q Sbjct: 429 LRREVGNDACRFFYVLRKSDQHLDFDLDLAKSQSNENPVYYVQYAHARVCSVLEQWGGEA 488 Query: 473 PDL---DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 +L DL + EL L L +P +I+NA P+++AFYL DLA Sbjct: 489 AELRAAQLDLLG----------NERELALCARLGGFPELIQNAAADHAPHQIAFYLKDLA 538 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + FH ++ R + ++ L + RL L AV ++ + L ++GV +P M Sbjct: 539 AEFHSWYNAER-------MLVDDPALRLARLALATAVRQVLATALALLGVSAPQSM 587 >gi|227832873|ref|YP_002834580.1| Arginyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975] gi|262182639|ref|ZP_06042060.1| arginyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975] gi|254782956|sp|C3PFN8|SYR_CORA7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|227453889|gb|ACP32642.1| Arginyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975] Length = 553 Score = 313 bits (802), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 185/582 (31%), Positives = 302/582 (51%), Gaps = 35/582 (6%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 D S +KN + + +++ +L + + +ERPR+ HG +TN A+ +++ G P + Sbjct: 5 DLSVLIKNTAAAVLTEHELDASVLPETVTVERPRNPEHGDYATNLALQVAKKAGAQPREL 64 Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 A+ + + + +D IAG GF+N+ L+ + I++ ++ +G ++G N +G K+N Sbjct: 65 AQWLADALAGNDAIDEASIAGPGFLNIRLAAAAQGAIVAQVLNAGADFGSNTTYQGKKIN 124 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGP+H+G R A VGD+L ++ SG EVTREYY ND G QI+ A S+ Sbjct: 125 LEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAEVTREYYFNDHGGQIDRFARSLVAA 184 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 + PE Y G Y+K + + + ++ + L+ + + + V+ M Sbjct: 185 AK------GEPTPEDGYGGGYIKEIAQGVLEQ-NPGALDGSDAEVQEAFRSAGVEMMFAQ 237 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 I++ L + D++ E+ + + I L G +YE Sbjct: 238 IKESLHEFGVDFDVYFHENSLF--ESGAVEKSIQKLKDNGKLYEA--------------- 280 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 +ST GDD DR ++KSDG+ Y A D+AY K++RG D IY++G+DH GY+ Sbjct: 281 -EGAWWLKSTEYGDDKDRVVIKSDGNAAYIAGDIAYVADKFDRGHDLAIYMLGADHHGYI 339 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 RL A A A+ + VL+ ++V L RDG +KMSKRAG ITL +V+ +G D R+ Sbjct: 340 ARLRASAQALGYDPDAVEVLIGQMVNLVRDGKAVKMSKRAGTVITLDDLVEAIGVDGARY 399 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPRN 483 ++ LD D QS +NPV+YVQY +AR SI R+A ++ F P + Sbjct: 400 SLVRSSVDSSLDIDLGLWASQSADNPVYYVQYGHARICSILRKAAELGFDTAALADAPLD 459 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ + E D LI L E+P V+ A +EP+++A Y +LA+VFH + + P Sbjct: 460 LLTHDKEGD-----LIRTLGEFPEVVATAATLREPHRIARYAEELAAVFHRFYDQCQVLP 514 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + RL L A ++++ L +GV +P +M Sbjct: 515 K---AGEETEPIHSARLALASATRQVMSNALTTVGVSAPEKM 553 >gi|169628524|ref|YP_001702173.1| arginyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977] gi|238688923|sp|B1MLU2|SYR_MYCA9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|169240491|emb|CAM61519.1| Arginyl-tRNA synthetase (ArgS) [Mycobacterium abscessus] Length = 550 Score = 313 bits (802), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 195/555 (35%), Positives = 296/555 (53%), Gaps = 37/555 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + +ERPR+ HG +TN A+ +++ +G+ P +A +V + + IAG GF+NL Sbjct: 32 VTVERPRNPEHGDYATNVALQVAKKVGVAPRDLAGWLVEALVSHAAIAGAEIAGPGFVNL 91 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGT-KVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 ++ I+++I+ +G YG N +GT +N+EFVSANPTGP+H+G R A VGD L Sbjct: 92 RIAADAQGTIVANILKAGETYG-NSDAQGTHTINLEFVSANPTGPIHIGGTRWAAVGDAL 150 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 L+A G +VTREYY ND GAQI+ S+ + + PE Y G Y+ + Sbjct: 151 GRLLARQGAKVTREYYFNDHGAQIDRFVRSLIASAE------GKEAPEDGYAGDYIADIA 204 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K++ + E L E + + ++ V M I++ L D+F ED H Sbjct: 205 KQVITQ-RPEALTLTEPERSEVFREIGVDLMFTHIKESLHEFGTDFDVFTHEDSMHT--S 261 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 +++ I L + G +YE K + RS+ GDD DR ++KSDG+ Sbjct: 262 GRVQEAIAQLRKTGNIYE------KDGAS----------WLRSSNFGDDKDRVVIKSDGN 305 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 Y A D+AY+ K ERGFD IY++G+DH GY+ RL+AVAAA+ + VL+ ++V Sbjct: 306 PAYIAGDIAYYLDKRERGFDLCIYMLGADHHGYIARLKAVAAALGYDADSVEVLIGQMVN 365 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L RDG P++MSKRAG ITL +VD +G D+ R+ ++ +D D S ENP Sbjct: 366 LVRDGQPVRMSKRAGTVITLDDLVDAIGVDAARYALIRSSVDTSIDIDLELWASASSENP 425 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+YVQYA+AR ++ R A D+ L ++ E E LI L E+ R+++ Sbjct: 426 VYYVQYAHARLCALARNAADL--GLQHSTEHLELLTHEKEG-----ALIRGLGEFGRILQ 478 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 NA +EP+++A YL D+A +H + R P+ + L RL L A +I Sbjct: 479 NAAALREPHRVARYLEDIAGDYHRFYDSCRVLPQGDETPGD---LHAARLALCLATRQVI 535 Query: 571 NSGLNIIGVESPNEM 585 +GL+I+GV +P M Sbjct: 536 ANGLDILGVSAPERM 550 >gi|222530004|ref|YP_002573886.1| arginyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725] gi|222456851|gb|ACM61113.1| arginyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725] Length = 561 Score = 313 bits (801), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 200/558 (35%), Positives = 313/558 (56%), Gaps = 36/558 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90 I+IE+P++ +HG +TN AM L+R L +P IA IV I + ++ V +AG GFIN Sbjct: 36 IMIEKPKEKSHGDFATNIAMELTRKLKKNPREIANGIVNAIDLSNTFIEKVEVAGPGFIN 95 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + +L K++ I+ G +YG+ IG G KV +EFVSANPTGPMH+G+ R +GD L Sbjct: 96 FFFKKDWLYKVVDVILSEGDDYGKVNIGNGKKVMVEFVSANPTGPMHMGNARGGALGDCL 155 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+L+ ++GY VT+E+Y+NDAG QI S+ RY+Q L + DLPE Y G + Sbjct: 156 ANLLKWAGYNVTKEFYVNDAGNQIEKFGQSLEIRYRQ-LKGENVDLPEDCYHGEDIIERV 214 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 KE D++ +L N ++ + D++++ + ++++ L+ I++D++ E + + Sbjct: 215 KEYLDEHGDDLENLSSDERRKKLVDFALKRNILLMKEHLRKYGIEYDVWFHESSLY--ES 272 Query: 271 SPIRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 + + I++L +GY YE G L SK + D L++++ Sbjct: 273 GEVFETIEDLKSRGYTYEKDGALWFAASKIDESLK-----------------DEVLIRAN 315 Query: 329 GSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387 G TYFAAD+AY + K+E RGFD +I + G+DH G+V R++A A+ ++ V+L + Sbjct: 316 GIPTYFAADIAYHRNKFEKRGFDIVIDIWGADHHGHVARMKAAMKALGIDPEKLIVILMQ 375 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 LVRL R ++MSKR G ITL ++DE+G D+ RFM + ++ D V +Q+ Sbjct: 376 LVRLVRGKEVVRMSKRTGKAITLIDLIDEIGKDAARFMFNTKSADTHIEIDLDLVTQQTL 435 Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 +NPVFYVQYA+AR I R + LD ++ I E EL+L+ L E P Sbjct: 436 DNPVFYVQYAHARTCGIIRALSEEGIVLD-----KSRIKVELLQQEEELELLKKLLELPE 490 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 IE A + ++ YL DLAS+FH ++ R V+ N +L RL LV V Sbjct: 491 EIEMAAKNLDVSRVTKYLLDLASMFHAFYNACR-------VKNENEELMFTRLSLVECVR 543 Query: 568 SIINSGLNIIGVESPNEM 585 +IN+ L ++GV++P +M Sbjct: 544 IVINNMLRLLGVDAPEKM 561 >gi|295105829|emb|CBL03372.1| arginyl-tRNA synthetase [Gordonibacter pamelaeae 7-10-1-b] Length = 578 Score = 313 bits (801), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 190/568 (33%), Positives = 308/568 (54%), Gaps = 40/568 (7%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +ERPRD A+G ++ AM ++ +P IA++IV + + V SV IAG GFIN+ Sbjct: 36 ALERPRDEANGDWASTVAMRSAKLAKKNPREIAQIIVDHLPENDLVQSVDIAGPGFINIR 95 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGT-KVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+PS L+ + + ++GR I +G K+N+E++SANPTGP+HVGH R A +GD A Sbjct: 96 LAPSALQGVAAQARAEKGDFGRGTIPEGERKINLEYISANPTGPLHVGHGRWAALGDATA 155 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +M +GY+V E+YINDAG Q++ SV RYQQ L D ++PE Y G Y+K + + Sbjct: 156 RVMRHAGYDVFEEFYINDAGTQMDNFGESVAVRYQQ-LLGRDVEMPEACYAGSYVKDIAQ 214 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP- 270 + D+ + L+ ++ + ++ + + + + + SE + D Sbjct: 215 AIIDEDGDKWLDADPKERMENFRERAYAYELAEQHRVTERFGTTFECWFSERSLYVPDET 274 Query: 271 --SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 S + ++ + +GY+Y K T F+S+ D+ DR L+K++ Sbjct: 275 GKSAVDRSLEAMDAKGYIY------VKDGAT----------WFKSSAFDDEKDRVLIKAN 318 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 G TYF +D+AY K ERGFD++I + G+DH GY+ R EA+ AA A + ++L +L Sbjct: 319 GEMTYFMSDVAYHYNKMERGFDHLINIWGADHHGYIARCEAMLAAWGWPGA-LEIMLGQL 377 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V L+RDG ++MSKR G+ IT ++DEVG D+ R++ML + + + +DFD K++ Sbjct: 378 VNLFRDGEAVRMSKRTGEMITFEELIDEVGVDATRYLMLAKSSDQPIDFDIEVAKKKDAS 437 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFP-------DLDFDLFPRNVIPQESEFD----TSELQ 497 NPV+YVQYA+AR SI R+A D ++ D VIP + + SEL Sbjct: 438 NPVYYVQYAHARICSILRKAADPADAAAAEAGEMSMDELAAKVIPADVDLSPLTHESELA 497 Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557 L+ + ++ ++ A + ++L Y DLAS+FH +++ V +T Sbjct: 498 LMRKMDDFGPLVAQAARDRAAFRLTHYAQDLASLFHSFYTNCH-------VIGEEEAVTN 550 Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585 RL LV A ++ L+++GV +P +M Sbjct: 551 ARLALVDATRIVLAKTLDLLGVTAPAKM 578 >gi|160871916|ref|ZP_02062048.1| arginyl-tRNA synthetase [Rickettsiella grylli] gi|159120715|gb|EDP46053.1| arginyl-tRNA synthetase [Rickettsiella grylli] Length = 587 Score = 313 bits (801), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 205/593 (34%), Positives = 307/593 (51%), Gaps = 71/593 (11%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI---DPDVDSVFIAGKGF 88 I I+ R HG S+N A++L++ L + PL +AE I A I + ++ + +AG GF Sbjct: 27 IQIDYARGKLHGDFSSNIALVLAKQLNVQPLQLAEKIKANIDCCSENSKIEKIEVAGPGF 86 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 IN +L ++S I+ ++G + +G+ V IEFVSANPTGP+HVGH R A GD Sbjct: 87 INFFLKKWVWHDVISQILTQTNQFGTSNLGRQESVLIEFVSANPTGPLHVGHGRGAAYGD 146 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 ++ L++ GY+V EYYINDAG Q++ LA SV+ RY + + N + P Y G Y++ Sbjct: 147 SITRLLSAVGYQVCSEYYINDAGRQMDILATSVWLRYLE-ICNETFNFPSNAYRGNYVQK 205 Query: 209 VGKELADKYSSELLNFPEE---KWLPI------------------------------VKD 235 + ++L +Y P E K +P+ V D Sbjct: 206 IAQQLYTQYGERFFQ-PSELVFKDIPVDEPQGGNKEHHIDSLILQAKTLLGPNGYEKVFD 264 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 + +++ I++DL A + D + SE +L + G+V + I + Sbjct: 265 AGLNSILIDIKEDLTAFRVNFDEWFSEK---------------SLFKMGFVNKAI---KR 306 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY-FKCKYERGFDNMIY 354 K K L F+ST GDD DR LL+ +G TYFAAD Y +R F +I Sbjct: 307 LKELGKTYEANGALWFKSTDFGDDKDRVLLRENGQPTYFAADAGYRLYILEKRKFKKIIN 366 Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414 V+G+DH GY+ R+ AV A K LL + LYR I+MS R+G+FITLR + Sbjct: 367 VLGADHHGYIPRIHAVIQAFGFPKESFKALLVQFAILYRGDKKIQMSTRSGEFITLRDLR 426 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ--AKDIF 472 +EVG+D+ RF + R+ + +DFD KEQS NPV+YVQY YAR S+ RQ AK Sbjct: 427 EEVGADATRFFYVLRRVDQHMDFDLELAKEQSNANPVYYVQYVYARINSVMRQLAAKQWV 486 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 + + + + + E T E L+V L Y V+E A + EP+ LA +L DLA F Sbjct: 487 WN---KILGMDSLSELKE--TQEQNLLVLLNRYSEVVELAAVTYEPHILAHFLKDLAQSF 541 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H ++ N + V+ +N L RL L+ A+A +I +GL+++GV++ M Sbjct: 542 HVYY-----NSFIFLVENDN--LRNARLNLIAAIAQVIKNGLDLLGVKTLEVM 587 >gi|291612598|ref|YP_003522755.1| arginyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1] gi|291582710|gb|ADE10368.1| arginyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1] Length = 558 Score = 313 bits (801), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 193/561 (34%), Positives = 307/561 (54%), Gaps = 40/561 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 ++IERP+ +HG + N AM L++PL P IA ++A + ++ V IAG GFIN+ Sbjct: 31 VLIERPKQASHGDYACNLAMQLAKPLRKSPRDIANALIAALPKSDVIEKVEIAGAGFINV 90 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +++ + + ++ ++ +G YG +G G KV +EFVSANPTGP+HVGH R A VGD L Sbjct: 91 FITTAAKQDVVHGVLQAGAGYGHVHVGGGRKVGVEFVSANPTGPLHVGHGRGAAVGDCLC 150 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ +G+ VTRE+Y NDAG QI+ L LSV R + + +D PE Y G Y+ V K Sbjct: 151 NVLHAAGWNVTREFYYNDAGVQIDNLTLSVQLRC-KGITPDDPSWPESGYRGDYIVDVAK 209 Query: 212 ELADKYSSE-----LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 K + E + + ++ ++V + + DL+A ++ D+F E + Sbjct: 210 SYMAKETVEADDQHITGKGDVNDAEAIRHFAVAYLRREQDLDLRAFEVEFDVFSLESALY 269 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 + + + L G+ YE L R+T GDD DR + K Sbjct: 270 T--DGKVEETVQKLIASGHTYE----------------QDDALWLRTTDFGDDKDRVMRK 311 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--KAQINVL 384 SDG YTYF D+AY K+ RGF+ +I GSDH + R+ A A+ K + + Sbjct: 312 SDGGYTYFVPDVAYHLDKWRRGFERVINEQGSDHHSTITRVRAGLQALDAGIPKGWPDYV 371 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L ++V + ++G +K+SKRAG ++TLR ++DEVG D+ R+ + R L FD K Sbjct: 372 LHQMVTVLKNGEEVKISKRAGSYVTLRDLIDEVGCDATRYFLAARHPDSQLVFDIDLAKS 431 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 QS +NPV+Y+QYA+AR ++ Q + L +V +SE++T QL+ + + Sbjct: 432 QSNDNPVYYIQYAHARISTVLAQ----WNGDRLALLHADVGVLDSEYET---QLLQRMID 484 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 +P+VIE A P+ +AFYL +LA+ FH +++ RF+ + KL + RL L+ Sbjct: 485 FPQVIETAAEDLAPHLVAFYLKELAADFHSYYNAS------RFL-VEDEKLKLARLALIA 537 Query: 565 AVASIINSGLNIIGVESPNEM 585 AVA ++ +GL ++GV +P +M Sbjct: 538 AVAQVLKNGLALLGVSAPEKM 558 >gi|108800862|ref|YP_641059.1| arginyl-tRNA synthetase [Mycobacterium sp. MCS] gi|119870002|ref|YP_939954.1| arginyl-tRNA synthetase [Mycobacterium sp. KMS] gi|123368893|sp|Q1B531|SYR_MYCSS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|166232810|sp|A1UK06|SYR_MYCSK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|108771281|gb|ABG10003.1| arginyl-tRNA synthetase [Mycobacterium sp. MCS] gi|119696091|gb|ABL93164.1| arginyl-tRNA synthetase [Mycobacterium sp. KMS] Length = 550 Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 190/558 (34%), Positives = 282/558 (50%), Gaps = 43/558 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + +ERPR+ HG +TN A+ + + +G++P +A + + + S +AG GF+NL Sbjct: 32 VTVERPRNPEHGDYATNLALQVGKKVGVNPRELAGWLAEALTATAGIASAEVAGPGFVNL 91 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + I+ I+ S YG + +N+EFVSANPTGP+H+G R A VGD L Sbjct: 92 RIEAAAQNVIVGDIITSAERYGHSAALAERNINLEFVSANPTGPIHIGGTRWAAVGDALG 151 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 L+A G V REYY ND GAQI+ S+ + PE Y G Y+ + Sbjct: 152 RLLATQGAAVVREYYFNDHGAQIDRFVSSLIAAAKG------EPTPEDGYAGSYIGDIAA 205 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 ++ K L P+++ + V M I+ L D+F ED H Sbjct: 206 QVLAK-DPGALELPDDEMRETFRAIGVDLMFDHIKISLHDFGTDFDVFTHEDSMHT--SG 262 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + + I L G +YE K T R+T GDD DR ++KSDG+ Sbjct: 263 RVEEAIARLRENGAIYE------KDGAT----------WLRTTDFGDDKDRVVIKSDGAP 306 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 Y A DLAYF K +RGFD IY++G+DH GY+ RL+A AAA+ + + V++ ++V L Sbjct: 307 AYIAGDLAYFLDKRQRGFDLCIYMLGADHHGYIARLKAAAAALGDDPDTVEVMIGQMVNL 366 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 RDG P++MSKRAG ITL +V+ +G D+ R+ ++ +D D S ENPV Sbjct: 367 VRDGQPVRMSKRAGTVITLDDLVEAIGVDAARYSLIRSSVDTPIDIDLALWSSASNENPV 426 Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD----TSELQLIVHLAEYPR 507 +YVQYA+AR ++ R A D+ V+ + D E LI +L E+PR Sbjct: 427 YYVQYAHARLSALARNAADL-----------GVVADTAHLDLLTHDKEGTLIRNLGEFPR 475 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 V+E+A +EP+++ YL DLA +H + R P+ + L RL L A Sbjct: 476 VLESAAALREPHRVCRYLEDLAGDYHRFYDSCRVLPQGDEAPGS---LHQARLALCQATR 532 Query: 568 SIINSGLNIIGVESPNEM 585 +I +GL I+GV +P M Sbjct: 533 QVIANGLAILGVSAPERM 550 >gi|206602542|gb|EDZ39023.1| Arginyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG'] Length = 595 Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 207/603 (34%), Positives = 320/603 (53%), Gaps = 41/603 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 S L++YLKE + + + +E P+ G +ST AM LS L P IAE Sbjct: 10 ISDTLRSYLKERGQGEDLATLLPKGVRLEFPKKDGFGDISTPVAMHLSAQLKTPPRKIAE 69 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI---GKGTKV 123 + + + P SV IAG G++N S + +RK L I ++ +L+ + ++ Sbjct: 70 SLYSFLSGSPLFQSVEIAGPGYLNFTFSETSVRKALLKI----LDTHSDLVFPEDERRRI 125 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS--V 181 +EFVSANPTGP+HVGH R A GD L+ ++ G++VT EYYINDAG Q+ L S + Sbjct: 126 LVEFVSANPTGPLHVGHGRGAAYGDALSRILKAVGHDVTTEYYINDAGNQMEMLGRSTCL 185 Query: 182 FWR--YQQALYNNDSDLPEGYYP--GVYLKHVGKE-------LADKYSSELLN--FPEEK 228 WR ++ + ++ +G P G Y++ + +E L+ + S L+ PE Sbjct: 186 AWRKLHRMVPESEENAFLKGATPYKGDYIREIAQEMINTPGILSPEESRASLDPEAPETL 245 Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR---GDPSPIRDIIDNLARQGY 285 +L +Y+ +M+ IR+DL+ ++ D F SE H G S + N R+ Sbjct: 246 YLGAFTEYAQSRIMEGIREDLQLFDVPFDAFFSEKILHEKKNGKNSDTVTLWINRIREAS 305 Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345 + P ++ L R+T++GDD DR L++SDG TYFAAD+AY K Sbjct: 306 LQATDPGVPDVYESEGA------LWLRTTVLGDDKDRVLVRSDGRLTYFAADIAYHALKI 359 Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS---EKKAQINVLLCELVRLYRDGMPIKMSK 402 ER FD +I V G+DH GY+ R+ A +S + + V L +LV L RDG P+ MS Sbjct: 360 ERKFDVLIDVWGADHHGYIPRMNAAVKTLSRLLDHPVEFRVALIQLVSLVRDGRPVSMST 419 Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462 R G+F+TLR V+DEVG D+ RF L R + L+FD K KE+S +NPV+YVQYA+AR + Sbjct: 420 RGGEFVTLREVLDEVGVDATRFSYLSRSHESPLEFDLNKAKERSMDNPVYYVQYAHARVK 479 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 S+ RQA L + R++ E+ + +E L+ L + V+ + + E + + Sbjct: 480 SLLRQADTRGLTLPAEWSSRDL---EALREPAEKDLVKRLDRFSGVVNDVSRTLEVHPMT 536 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 YL DLA +H + H R+ + +R+LT+ R+ L AV ++ GL ++G+ +P Sbjct: 537 EYLTDLAGRYHHFYFHH----RILSQEPQDRELTIARIALSIAVGRVLEKGLGLLGISAP 592 Query: 583 NEM 585 + M Sbjct: 593 DVM 595 >gi|124514654|gb|EAY56166.1| Arginyl-tRNA synthetase [Leptospirillum rubarum] Length = 595 Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 209/603 (34%), Positives = 315/603 (52%), Gaps = 41/603 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 S L++YL+E + + I +E P+ G +ST AM LS L P IAE Sbjct: 10 ISDALRSYLQERGQGEDLATLLPKGIRLEFPKKDGFGDISTPVAMHLSAHLKTPPRKIAE 69 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI---GKGTKV 123 + + + P SV IAG G++N S +RK L I ++ +L+ + +V Sbjct: 70 SLSSFLSGSPLFQSVEIAGPGYLNFTYSEMSVRKTLLRI----LDTDSDLVFPEDEKRRV 125 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS--V 181 +EFVSANPTGP+HVGH R A GD L+ ++ G++VT EYYINDAG Q+ L S + Sbjct: 126 LVEFVSANPTGPLHVGHGRGAAYGDALSRILKAVGHDVTTEYYINDAGNQMEMLGRSTCL 185 Query: 182 FWR--YQQALYNNDSDLPEGYYP--GVYLKHVGKELAD-------KYSSELLN--FPEEK 228 WR ++ + + +G P G Y++ + +E+ D + S L+ PE Sbjct: 186 AWRKLHRAVPESEEQAFLKGATPYKGDYIREIAQEMIDTPGILSPEESRAALDPEAPETL 245 Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR---GDPSPIRDIIDNLARQGY 285 +L +Y+ +M+ IR+DL ++ D F SE H G S + N R+ Sbjct: 246 YLGTFTEYAQGRIMEGIREDLHLFDVPFDAFFSEKILHEKKNGKNSDAVTLWINRIREAS 305 Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345 + P ++ L R+T++GDD DR LL+SDG TYFAAD+AY K Sbjct: 306 MQASDPEVPDVYESEGA------LWLRTTVLGDDKDRVLLRSDGRLTYFAADIAYHALKI 359 Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS---EKKAQINVLLCELVRLYRDGMPIKMSK 402 ER FD +I V G+DH GY+ R+ A +S + + V L +LV L RDG P+ MS Sbjct: 360 ERKFDVLIDVWGADHHGYIPRMNAAVKTLSRLLDHPVEFRVALIQLVSLVRDGRPVSMST 419 Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462 R G+F+TLR V+DEVG D+ RF L R + L+FD K KE+S +NPV+YVQYA+AR + Sbjct: 420 RGGEFVTLREVLDEVGVDATRFSYLSRSHESPLEFDLNKAKERSMDNPVYYVQYAHARVK 479 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 S+ RQA L + R++ E+ + +E L+ L + V+ + + E + + Sbjct: 480 SLLRQADTRGLSLPSEWSSRDL---EALREPAEKDLVKRLDRFSGVVNDVSRTMEVHPMT 536 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 YL DLA +H + H R+ + +R+LT R+ L AV ++ GL ++G+ +P Sbjct: 537 EYLTDLAGRYHHFYFHH----RILSQEPQDRELTTARIALSIAVGRVLEKGLGLLGISAP 592 Query: 583 NEM 585 M Sbjct: 593 EVM 595 >gi|114321921|ref|YP_743604.1| arginyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1] gi|114228315|gb|ABI58114.1| arginyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1] Length = 611 Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 207/573 (36%), Positives = 311/573 (54%), Gaps = 35/573 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +ER RD AHG + N AM+L+R P IA+ +V + +D IAG GFIN Sbjct: 55 IQVERARDRAHGDYAANTAMMLARAARRKPREIAQALVGALPGSEYIDRAEIAGPGFINF 114 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+P + + +YGR+ +G G +V +EFVSANPTGP+HVGH R A G LA Sbjct: 115 ILTPQAAWAPVRQALSQAGDYGRSDLGAGRRVMVEFVSANPTGPLHVGHGRGAAFGAALA 174 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 L+A +GY+V REYY+NDAG Q++ LA SV+ RY +A P+ Y G Y++ + Sbjct: 175 DLLAAAGYDVYREYYVNDAGRQMDILAASVWLRYLEAC-GEPVRFPDNGYRGDYVREIAT 233 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD-LKALNIQHDIFISEDD----FH 266 LA++ + L P ++ ++ D A R+ + AL + + E F Sbjct: 234 GLAEQV-GDALRHPADR---VMADLPPDAAQGGDREQHIDALVRRARALLGEAGYRQVFE 289 Query: 267 RGDPSPIRDIIDNLARQGYVYE-----------GILPPPKSKTTQKCDMDRKQ--LLFRS 313 +G + DI D+L G Y+ G + ++ T+ ++ L FRS Sbjct: 290 QGLNGILADIRDDLEGFGVTYQNWYSERSLTESGQVERALARLTEAGHTYQQDGALWFRS 349 Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373 + GDD DR L + +G TYFA+D+AY K +RGFD ++ V G+DH GYV R+ A AA Sbjct: 350 SAFGDDKDRVLRRENGQTTYFASDVAYHLDKLQRGFDQLVDVWGADHHGYVPRVRAALAA 409 Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433 E + +++V L + LYR ++MS R+G+F+TLR + EVG D+ RF + RK + Sbjct: 410 FGEDEQRLSVRLVQFAILYRGQERLQMSTRSGEFVTLRQLRAEVGDDAARFFYVMRKPEQ 469 Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493 +DFD K +S +NPV+Y+QYA+AR S+FRQ + L +D R + + + Sbjct: 470 HMDFDLELAKSESSDNPVYYLQYAHARICSVFRQLDE--KGLVWDR-ARGLDALDRLGED 526 Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-SHGRENPRLRFVQANN 552 E L+ L YP VIE+A A EP+++A YL DLA+ H ++ +H +F+ + Sbjct: 527 HEQALVTELGRYPEVIESAAQAHEPHQVAAYLRDLANALHTYYNAH-------QFI-VED 578 Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L RL LV A ++ +GL ++GV +P M Sbjct: 579 AALRDARLCLVAATRQVLRNGLELLGVRAPERM 611 >gi|254295941|ref|ZP_04963398.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 406e] gi|157806017|gb|EDO83187.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 406e] Length = 594 Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 203/611 (33%), Positives = 318/611 (52%), Gaps = 65/611 (10%) Query: 11 LKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 L+N +K++ K + +L I +ERP+ AHG ++ N A+ L++PLG +P +AE Sbjct: 13 LENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQLAEQ 72 Query: 68 IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 IVA + P+ VD+ IAG GFINL L+P+ + ++ +++ G +G + G +V Sbjct: 73 IVAALTAQPEAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVLAQGRAFGASERDHGKRV 132 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA+S Sbjct: 133 LLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAISTQA 192 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPIVKDYS 237 R + L D+ PE Y G Y+ + G+ +A + + + L ++ ++ Sbjct: 193 R-ARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRDVEDLEAIRKFA 251 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 V + + DLKA ++ D + E + + +D L G YE Sbjct: 252 VTYLRREQDMDLKAFGVKFDQYYLESSLYT--EGRVEKTVDALTAAGMTYE--------- 300 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 L R+T GDD DR + K+DG+YTYF D+AY K+ERGF +I + G Sbjct: 301 -------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVINIQG 353 Query: 358 SDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV- 414 SDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+R ++ Sbjct: 354 SDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVRDLIE 413 Query: 415 ----------------DEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454 DE G D+VRF ++ RK FD +Q+ ENPV+YV Sbjct: 414 WSGGATPGSEGSPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYV 473 Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514 QYA+AR S+ + K + D L ++ P +S+ + L+ LAEYP V+ +A Sbjct: 474 QYAHARICSVINEWKSRYGATDALLPGADLSPLDSK---QAMALMQKLAEYPDVLAHAAG 530 Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 P+ +AFYL +LAS FH ++ R V + + R L+ A ++ +GL Sbjct: 531 ELAPHAVAFYLRELASEFHSFYNAER-------VLVDEQAPRTARAALLAATRQVLENGL 583 Query: 575 NIIGVESPNEM 585 ++GV +P++M Sbjct: 584 AMLGVSAPSKM 594 >gi|254482629|ref|ZP_05095867.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2148] gi|214036988|gb|EEB77657.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2148] Length = 561 Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 191/562 (33%), Positives = 298/562 (53%), Gaps = 36/562 (6%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 ++ I+R RD +HG L++N A+ L++ +P +A LI A + V IAG GFIN Sbjct: 29 KVQIDRTRDKSHGDLASNIALTLAKAAKKNPRELAGLICAALPESDLVAKTEIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +L+ S + ++ +I+ G +G + +G G +V +EFVSANPTGP+HVGH R A VGD+L Sbjct: 89 FFLTDSSSQSVVRTILERGAAFGHSNVGAGRRVQVEFVSANPTGPLHVGHGRGAAVGDSL 148 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 LM +G+ V E+Y NDAGAQI+ LA SV R + D PE Y G Y+ V Sbjct: 149 CRLMMATGWNVASEFYYNDAGAQIDNLARSVQARC-NGMDPQSPDWPEDGYRGGYISDVA 207 Query: 211 K-----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 + D + + + ++ ++V + + DLKA + D++ E Sbjct: 208 NAYLAGDTIDAQDQHVTGAADVDDVEAIRQFAVAYLRREQDLDLKAFAVHFDLYFLESSL 267 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 + + + + L QG+ YE L R+T GDD DR + Sbjct: 268 Y--NSGAVEQTVQRLIEQGHTYE----------------QDGALWLRTTDFGDDKDRVMR 309 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ--INV 383 KS+G YTYF D+AY K++RGF+ +I G+DH V R+ A A+ + Q + Sbjct: 310 KSEGGYTYFLPDVAYHLNKWQRGFERVINEQGADHHSTVTRVRAGLQALQQDIPQGWPDY 369 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443 +L ++V + RDG +K+SKRAG ++TLR ++DEVG D+ R+ ++ R S L FD Sbjct: 370 VLHQMVTVMRDGEEVKISKRAGSYVTLRDLIDEVGRDATRYFLVARGPSSQLTFDIDLAL 429 Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503 QS +NPV+Y+QYA+AR SI R+ ++ + + + Q +E E L+ L Sbjct: 430 SQSNDNPVYYIQYAHARVCSIMRKLEEQGDTWSIEAGLES-LGQLTE--DHEKALMRRLD 486 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 ++P V+ +A EP+ +A YL +LA FH + N V +++ + RL L Sbjct: 487 QFPEVVSHAAENSEPHNVANYLRELAGDFHSWY-----NAHKTLV--DDKSVRDARLALS 539 Query: 564 HAVASIINSGLNIIGVESPNEM 585 AV +IN+GL+++GV +P M Sbjct: 540 EAVRQVINNGLDLLGVSAPESM 561 >gi|255324499|ref|ZP_05365616.1| arginine--tRNA ligase [Corynebacterium tuberculostearicum SK141] gi|255298405|gb|EET77705.1| arginine--tRNA ligase [Corynebacterium tuberculostearicum SK141] Length = 550 Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 191/582 (32%), Positives = 308/582 (52%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD ++ +K ++ +++ +L + + +ERPR+ HG +TN A+ +++ G +P Sbjct: 4 ADLATLIKETAVKVMESHELDSSVLPETVTVERPRNPEHGDYATNVALQVAKKAGANPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 + + + + V IAG GFIN+ L+ +I++ I+ +G EYG N G KV Sbjct: 64 LGGWLAEALADNDAVAEADIAGPGFINIRLAADAQGEIVAQILRAGKEYGSNDSFAGKKV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++ SG EVTREYY ND G QI+ + S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAEVTREYYFNDHGGQIDRFSRSLVA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y++ + + + +K S L EE D V+ M Sbjct: 184 AAK------GEPTPEDGYGGAYIQDIAQAVVEKNPSALEGSDEEVQEAFRAD-GVEMMFA 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L + D++ E+ + + ++ L +G++YE Sbjct: 237 QIKQSLHEFGVDFDVYFHENSLF--ESGAVDSALEKLKAEGHMYEA-------------- 280 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 +ST GD DR ++KSDG+ Y A D+AY K++RG D IY++G+DH GY Sbjct: 281 --ENAWWLKSTDYGDSKDRVVVKSDGNAAYIAGDIAYVADKFDRGHDLNIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 V RL+A AAA+ + VL+ +LV L RDG P++MSKRAG IT+ +V +G D+ R Sbjct: 339 VPRLKAAAAALGYNADAVEVLIGQLVNLLRDGKPVRMSKRAGTVITMEDLVAAIGVDASR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ + +D D + QS +NPV+YVQY +AR SI R+A ++ +D + + Sbjct: 399 YSLVRSSVDQSIDIDLGLWESQSSDNPVYYVQYGHARLCSIGRKAAEL--GVDSEGADLS 456 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ + E D LI L E+P V+E A +EP+++A Y DLA+VFH + + P Sbjct: 457 LLTHDREGD-----LIRTLGEFPAVVEEAAQLREPHRIARYAEDLAAVFHRFYDSCQVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + RL L A ++ + L ++GV +P +M Sbjct: 512 K---AGEDEAPIHGARLALAQASRVVLANALTMVGVSTPEKM 550 >gi|167901057|ref|ZP_02488262.1| arginyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177] Length = 594 Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 203/611 (33%), Positives = 318/611 (52%), Gaps = 65/611 (10%) Query: 11 LKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 L+N +K++ K + +L I +ERP+ AHG ++ N A+ L++PLG +P +AE Sbjct: 13 LENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQLAEQ 72 Query: 68 IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 IVA + P+ VD+ IAG GFINL L+P+ + ++ +++ G +G + G +V Sbjct: 73 IVAALTAQPEAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVLAQGRAFGASERDHGKRV 132 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA+S Sbjct: 133 LLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAISTQA 192 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPIVKDYS 237 R + L D+ PE Y G Y+ + G+ +A + + + L ++ ++ Sbjct: 193 R-ARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRDVEDLEAIRKFA 251 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 V + + DLKA ++ D + E + + +D L G YE Sbjct: 252 VTYLRREQDMDLKAFGVKFDQYYLESSLYT--EGRVEKTVDALIAAGMTYE--------- 300 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 L R+T GDD DR + K+DG+YTYF D+AY K+ERGF +I + G Sbjct: 301 -------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVINIQG 353 Query: 358 SDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV- 414 SDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+R ++ Sbjct: 354 SDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVRDLIE 413 Query: 415 ----------------DEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454 DE G D+VRF ++ RK FD +Q+ ENPV+YV Sbjct: 414 WSGGATPGSEGSPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYV 473 Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514 QYA+AR S+ + K + D L ++ P +S+ + L+ LAEYP V+ +A Sbjct: 474 QYAHARICSVINEWKSRYGATDALLPGADLSPLDSK---QAMALMQKLAEYPDVLAHAAG 530 Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 P+ +AFYL +LAS FH ++ R V + + R L+ A ++ +GL Sbjct: 531 ELAPHAVAFYLRELASEFHSFYNAER-------VLVDEQAPRTARAALLAATRQVLENGL 583 Query: 575 NIIGVESPNEM 585 ++GV +P++M Sbjct: 584 AMLGVSAPSKM 594 >gi|330818465|ref|YP_004362170.1| Arginyl-tRNA synthetase [Burkholderia gladioli BSR3] gi|327370858|gb|AEA62214.1| Arginyl-tRNA synthetase [Burkholderia gladioli BSR3] Length = 594 Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 205/618 (33%), Positives = 315/618 (50%), Gaps = 79/618 (12%) Query: 11 LKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 L + +K++ +K E + + I +ERP+ AHG ++ N AM L++PLG +P +AE Sbjct: 13 LADSVKQVVQALKGESEAGFVAPTITLERPKAAAHGDVACNVAMQLAKPLGTNPRQLAEK 72 Query: 68 IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 IVA + P V++ IAG GFINL L+ + + ++ ++ +GR+ G +V Sbjct: 73 IVAAVTAHPSAAGLVEAAEIAGPGFINLRLTAAAKQAVIGAVFAEREAFGRSAHEAGRRV 132 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LALS Sbjct: 133 LLEFVSANPTGPLHVGHGRQAALGDVLANVLASQGYAVHREFYYNDAGVQIGNLALSTQA 192 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKE-LADKYSSELLNFP-----EEKWLPIVKDYS 237 R + L D+D PE Y G Y+ + ++ LA S P + + + ++ ++ Sbjct: 193 R-ARGLKPGDADWPEAAYNGEYIADIARDYLAGATVSASDGEPVTGKGDIEDIEAIRKFA 251 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 V + + DLKA ++ D + E ++ + + L G YE Sbjct: 252 VAYLRREQDIDLKAFGVRFDQYYLESSLYQ--EGRVESTVQALVDAGMTYE--------- 300 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 L R+T GDD DR + K+DG+YTYF D+AY K++RGF +I + G Sbjct: 301 -------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVAKWQRGFTKVINIQG 353 Query: 358 SDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV- 414 SDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+R ++ Sbjct: 354 SDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKLSKRAGSYVTVRDLIE 413 Query: 415 ----------------DEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454 DE G D+VRF ++ RK FD +Q+ ENPV+YV Sbjct: 414 WSGGATPDAEVSPEQLDEAIITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYV 473 Query: 455 QYAYARCRSIFRQAKD-------IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 QYA+AR S+ + K I P DL P + P S L+ LAEYP Sbjct: 474 QYAHARICSVLNEWKSRHGADEAILPGA--DLSPLDSKPAAS--------LLQKLAEYPE 523 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 ++ +A P+ +AFYL DLA FH ++ R V ++ R+ L+ A Sbjct: 524 MLTHAAGELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAQRTARIALLAATR 576 Query: 568 SIINSGLNIIGVESPNEM 585 ++ +GL ++GV SP++M Sbjct: 577 QVLANGLAVLGVSSPSKM 594 >gi|308233577|ref|ZP_07664314.1| arginyl-tRNA synthetase [Atopobium vaginae DSM 15829] gi|328943970|ref|ZP_08241435.1| arginine--tRNA ligase [Atopobium vaginae DSM 15829] gi|327491939|gb|EGF23713.1| arginine--tRNA ligase [Atopobium vaginae DSM 15829] Length = 615 Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 193/612 (31%), Positives = 305/612 (49%), Gaps = 78/612 (12%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 ++ IERP D HG S+ A+ +R + P IA++IV + + +V+ V IAG GF Sbjct: 27 IEDACIERPADADHGDWSSTVALRTARLAHMAPAKIAQIIVDHLPENKEVEKVEIAGPGF 86 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 IN YL + +++ + G +G G G K+N EF+SANPTGP+HVGH R A +GD Sbjct: 87 INFYLKAAASNDVINDVRAQGSRWGSCDDGHGFKINYEFISANPTGPLHVGHGRWAALGD 146 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY----------------------- 185 ++ +++ F GY+V REYYIND G+Q++ SV RY Sbjct: 147 SICNVLDFCGYDVFREYYINDHGSQMDVFGGSVAMRYVQLCQIMQEKSCDSNKAYELLLQ 206 Query: 186 --QQALYNNDSDLPEGY--------------YPGVYLKHVGKELADKYSSELLNFPEEKW 229 ++ + + D PE + Y G Y+ + KE D EEK Sbjct: 207 DREEYVLDEDDSHPEKHPFMDAFNEHLGGNSYGGDYIIEIAKEFYDADGDAWYKVDEEKR 266 Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR---QGYV 286 ++ + QAM+ I+ + D++ SE + + + + AR GY+ Sbjct: 267 CDAFRERAYQAMLSRIKKTCHNVRCDFDLWFSERSLYDKNEQGVSLVDKAFARLDEMGYL 326 Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346 Y+ D L F+ST GDD DR L+KS+G YTYFA+D+AY K++ Sbjct: 327 YK---------------TDDGALWFKSTAFGDDKDRVLIKSNGDYTYFASDVAYHWNKFD 371 Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406 RG I + GSDH GY+ R+ V A+ K Q V L + V L R+G P++MSKR G Sbjct: 372 RGAQLSIDLWGSDHHGYIARVTNVCDALG-FKGQFKVDLGQFVNLLRNGEPVRMSKRRGT 430 Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466 + ++ EVG D+ R+ ++ + +++ +DFD VKE+S NPVFYVQYA+AR SI R Sbjct: 431 MVPFDELIAEVGVDATRYTLVSKSSNQTIDFDIEAVKEKSNANPVFYVQYAHARICSILR 490 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQE 517 A + + + + + Q++ + +L L+VH L+E+P +I + Sbjct: 491 HAAGV-SEEEAKSLGMDAVAQKAIGNACDLSLLVHPMEAALTRKLSEFPELISGCARDRA 549 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK----LTMMRLQLVHAVASIINSG 573 P+++ + +LA FHG +++ + + + R+ L+ RL AV + Sbjct: 550 PFRITHFCEELAGAFHGFYAN------CQVLSSEGRQIDPELSRARLAACDAVRINLEVA 603 Query: 574 LNIIGVESPNEM 585 L +IGV +P+ M Sbjct: 604 LKLIGVSAPDVM 615 >gi|126436460|ref|YP_001072151.1| arginyl-tRNA synthetase [Mycobacterium sp. JLS] gi|166232809|sp|A3Q3D3|SYR_MYCSJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|126236260|gb|ABN99660.1| arginyl-tRNA synthetase [Mycobacterium sp. JLS] Length = 550 Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 190/558 (34%), Positives = 281/558 (50%), Gaps = 43/558 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + +ERPR+ HG +TN A+ + + +G++P +A + + + S +AG GF+NL Sbjct: 32 VTVERPRNPEHGDYATNLALQVGKKVGVNPRELAGWLAEALTAAAGIASAEVAGPGFVNL 91 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + I+ I+ S YG + +N+EFVSANPTGP+H+G R A VGD L Sbjct: 92 RIEAAAQNVIVGDIITSAERYGHSAALAERNINLEFVSANPTGPIHIGGTRWAAVGDALG 151 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 L+A G V REYY ND GAQI+ S+ + PE Y G Y+ + Sbjct: 152 RLLATQGAAVVREYYFNDHGAQIDRFVSSLIAAAKG------EPTPEDGYAGSYIGDIAA 205 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 ++ K L P+ + + V M I+ L D+F ED H Sbjct: 206 QVLAK-DPGALELPDGEMRETFRAIGVDLMFDHIKISLHDFGTDFDVFTHEDSMHT--SG 262 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + + I L G +YE K T R+T GDD DR ++KSDG+ Sbjct: 263 RVEEAIARLRENGAIYE------KDGAT----------WLRTTDFGDDKDRVVIKSDGAP 306 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 Y A DLAYF K +RGFD IY++G+DH GY+ RL+A AAA+ + + V++ ++V L Sbjct: 307 AYIAGDLAYFLDKRQRGFDLCIYMLGADHHGYIARLKAAAAALGDDPDTVEVMIGQMVNL 366 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 RDG P++MSKRAG ITL +V+ +G D+ R+ ++ +D D S ENPV Sbjct: 367 VRDGQPVRMSKRAGTVITLDDLVEAIGVDAARYSLIRSSVDTPIDIDLALWSSASNENPV 426 Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD----TSELQLIVHLAEYPR 507 +YVQYA+AR ++ R A D+ V+ + D E LI +L E+PR Sbjct: 427 YYVQYAHARLSALARNAADL-----------GVVADTARLDLLTHDKEGTLIRNLGEFPR 475 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 V+E+A +EP+++ YL DLA +H + R P+ + L RL L A Sbjct: 476 VLESAAALREPHRVCRYLEDLAGDYHRFYDSCRVLPQGDEAPGS---LHQARLALCQATR 532 Query: 568 SIINSGLNIIGVESPNEM 585 +I +GL I+GV +P M Sbjct: 533 QVIANGLAILGVSAPERM 550 >gi|325124126|gb|ADY83649.1| arginyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2] Length = 596 Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 193/598 (32%), Positives = 311/598 (52%), Gaps = 79/598 (13%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 + R +D +HG ++N AMI S+ G+ P +AE ++A + D+ IAG GFIN +L Sbjct: 32 LTRTKDRSHGDFASNIAMIGSKAAGMKPRDLAEKVLAALPEVADISKAEIAGPGFINFFL 91 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + IL I +GR+ K+ +EFVSANPT +HVGH R A G T+A+L Sbjct: 92 NADQRFAILDQIQAQKEIFGRSQANAAKKIQVEFVSANPTSSLHVGHGRGAAYGMTVANL 151 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + +G +V REYY+NDAG Q++ LA S + RY + L N P+ Y G Y+K + + + Sbjct: 152 LEATGAKVDREYYVNDAGRQMDILATSTYLRYLELLGQNLV-FPKNAYQGDYVKEIAQGI 210 Query: 214 ADK---------------------YSSEL--------LNFPEEKWLP------------- 231 DK Y+ EL L+ +EK + Sbjct: 211 IDKDGDAYVREVANVYKDVPEDVQYAEELDSEGNKVVLSGDKEKHIDGLIANSQQLLGDG 270 Query: 232 --IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 + ++ A++ I+DDL + + + SE + I + ++ L ++G++YE Sbjct: 271 YRVFHQAALHAILDDIKDDLADFGVTFNQWFSEASL----SAKIDEALETLDQRGFLYE- 325 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349 + F+ST GD+ DR + + +G TYFA+D+AY K +RG+ Sbjct: 326 ---------------KDGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGY 370 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 ++I + GSDH GY+ R++A A+ ++ VLL + V L+R G ++MS R+G F+T Sbjct: 371 TDLIDIWGSDHHGYISRVKAAIDAMGYDSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVT 430 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQA 468 LR + EVG+D+ RF + RK+ + +DFD QSK+N V+Y+QYA+AR CR + Sbjct: 431 LRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARICRML---E 487 Query: 469 KDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 K + DL FD+ P + +E ++I LA YP + A A EP+++ YL + Sbjct: 488 KAVSTDLQFDV--NTARPHAARLSLDAETEIIAKLAAYPDAVLRAANAYEPHQVGNYLKE 545 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA++FHG ++ + V +++ +LT RL L V ++ +GL ++GV +P M Sbjct: 546 LAALFHGWYNEHK-------VLSDDAELTQARLLLSINVQQVLRNGLELLGVSAPESM 596 >gi|118468738|ref|YP_889211.1| arginyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155] gi|152031699|sp|Q9X5M0|SYR_MYCS2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|118170025|gb|ABK70921.1| arginyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155] Length = 550 Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 189/554 (34%), Positives = 288/554 (51%), Gaps = 35/554 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + +ERPR+ HG +TN A+ L + +G++P +A + + + +AG GF+NL Sbjct: 32 VTVERPRNPEHGDYATNLALQLGKKVGVNPRELAGWLATALTAADGIAVAEVAGPGFVNL 91 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + S I+++++ + YG + G VN+EFVSANPTGP+H+G R A VGD L Sbjct: 92 RIEASAQGVIITNVLAAEGSYGSSDQYAGRNVNLEFVSANPTGPIHIGGTRWAAVGDALG 151 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 L+A G VTREYY ND GAQI+ S+ + PE Y G Y+ + + Sbjct: 152 RLLATQGAAVTREYYFNDHGAQIDRFVNSLIASAKG------EPTPEDGYAGDYIVDIAQ 205 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 ++ K + ++L PE++ + V M I+ L D++ ED H Sbjct: 206 QVIAK-APDVLGLPEDQQRETFRAIGVDLMFTHIKQSLHDFGTDFDVYTHEDSMHT--SG 262 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + I L G +YE + R+T GDD DR ++KSDG+ Sbjct: 263 RVDQAITQLREAGSIYE----------------KDGAVWLRTTDFGDDKDRVVIKSDGNA 306 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 Y A DLAY+ K +RGFD IY++G+DH GY+ RL+A AAA+ + + VL+ ++V L Sbjct: 307 AYIAGDLAYYLDKRKRGFDLCIYMLGADHHGYIARLKAAAAALGDDPDTVEVLIGQMVNL 366 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 RDG P++MSKRAG ITL +V+ +G D+ R+ ++ +D D S ENPV Sbjct: 367 VRDGQPVRMSKRAGTVITLDDLVEAIGVDAARYALIRSSVDTPIDIDLELWSSASNENPV 426 Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511 +YVQYA+AR ++ R A D+ ++ D +++ E E LI +L E+PRV++ Sbjct: 427 YYVQYAHARLCALARNAADLGVSVNTDHL--DLLTHEKEG-----ALIRNLGEFPRVLKT 479 Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571 A +EP+++ YL DLA +H + R P+ L RL L A +I Sbjct: 480 AASLREPHRVCRYLEDLAGDYHRFYDSCRVLPQ---GDEEPGDLHSARLALCRATRQVIA 536 Query: 572 SGLNIIGVESPNEM 585 +GL I+GV +P M Sbjct: 537 NGLAILGVSAPERM 550 >gi|300112762|ref|YP_003759337.1| arginyl-tRNA synthetase [Nitrosococcus watsonii C-113] gi|299538699|gb|ADJ27016.1| arginyl-tRNA synthetase [Nitrosococcus watsonii C-113] Length = 585 Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 208/588 (35%), Positives = 309/588 (52%), Gaps = 62/588 (10%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 DRI ++R RD +HG ++N M+L++ P +A+LIVAR+ P V V IAG GFI Sbjct: 28 DRIQVQRTRDKSHGDFASNIPMVLAKEARQKPQKLADLIVARLPEHPWVKKVDIAGPGFI 87 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N L+ + ++S I+ +GR G+G V++EFVSANPTGP+HVGH R A GD Sbjct: 88 NFTLALPAFQAVVSQILEQKEFFGRCQTGQGKTVHLEFVSANPTGPLHVGHGRGAAYGDA 147 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 LA L+ GY+V REYY+NDAG Q++ LA+SV+ RY + L P Y G Y+ ++ Sbjct: 148 LARLLTAVGYQVHREYYVNDAGRQMDILAVSVWLRYLE-LCGETLPFPSNGYQGEYVCNI 206 Query: 210 GK-------ELADKYSSELL-----NFPE---EKWLPI----------------VKDYSV 238 G+ +L + E+L + PE EK+L V + ++ Sbjct: 207 GQYLKIEEGDLPHHSAKEILAGLPADAPEGDREKYLDALILKMKNLLGKNNYRKVFEQAL 266 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 ++ IR+DL N+ +D + SE + ++ I+ L GY+Y+ Sbjct: 267 NTILAGIREDLAKFNVTYDEWFSERQLTK--MGMVKIAIERLKAAGYLYQ---------- 314 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 FR+T GD+ DR +++ +G TYFA+D+AY K ERG+ +I V G+ Sbjct: 315 ------KDGAWWFRATNFGDEKDRVVIRENGQPTYFASDIAYHLNKLERGYHKIIDVWGA 368 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ Q +V L + LYR I+MS R+G+F+TLR + EVG Sbjct: 369 DHHGYIPRIKASLQALGADLQQFDVRLVQFAILYRGKEKIQMSTRSGEFVTLRELCQEVG 428 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ RF + R + +DFD K QS ENPV+YVQYA+AR S+F Q K +F Sbjct: 429 KDAARFFYVMRGAEQHMDFDLELAKSQSNENPVYYVQYAHARICSVFHQLK----AREFV 484 Query: 479 LFPRNVIPQESEFDTS-ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 + + S E+ L+ L+ Y V+E A P+ LA+YL DLA FH ++ Sbjct: 485 WNSEQGRKHLGKLNESHEVTLLDRLSCYSEVVEGAATQSAPHLLAYYLLDLARDFHTYY- 543 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N V + +L RL L+ A +I +GL ++GV +P M Sbjct: 544 ----NAHTFLV--DTPELRDARLALIAATRQVIKNGLTLLGVSAPESM 585 >gi|145596165|ref|YP_001160462.1| arginyl-tRNA synthetase [Salinispora tropica CNB-440] gi|145305502|gb|ABP56084.1| arginyl-tRNA synthetase [Salinispora tropica CNB-440] Length = 554 Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 186/565 (32%), Positives = 301/565 (53%), Gaps = 49/565 (8%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 ++ +ERPR+ HG ++ A+ LS+ +G+ P +A + ++ V SV IAG GF+ Sbjct: 30 EQTAVERPRNVEHGDYASTLALQLSKKVGVPPRELAAALAEQLGQAVGVKSVEIAGPGFL 89 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N+ L + ++ IV +G EYGR+ G +N+EFVSANPTGP+H+G R A VGD Sbjct: 90 NIRLDAAAAGQLAQVIVETGAEYGRSGRLAGQSINLEFVSANPTGPVHIGGVRWAAVGDA 149 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 L+ L+ +G V EYY NDAG+QI+ A S+ PE Y G YL + Sbjct: 150 LSRLLRATGAAVATEYYFNDAGSQIDRFARSLL------AAAKGEPPPEDGYAGAYLAEI 203 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH-RG 268 +++ + ++L + + + V+ M I+ L+ ++ D + +E D H RG Sbjct: 204 AQQVQSR-RPDVLALDDAAAQEVFRVEGVELMFAEIKSSLRDFGVEFDTYFNEKDLHNRG 262 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 + + ++ L +QG+++E R+T GDD DR L KSD Sbjct: 263 E---LELALERLRQQGHIFEA----------------DGATWLRTTDFGDDKDRVLRKSD 303 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCE 387 G +TYFAAD AY+ K ERGF+ ++ ++G+DH GY+ R++A+ A + + + +L+ + Sbjct: 304 GEWTYFAADCAYYLDKRERGFERVVLMLGADHHGYLGRMKAMVACFGDDPGRNLEILIGQ 363 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 +V L RDG P++MSKRAG ++L +VD +G D+ R+ + +D D ++ Sbjct: 364 MVNLVRDGAPVRMSKRAGTVVSLEDLVDAIGVDAARYALARYSTDSPIDIDIELWTRATR 423 Query: 448 ENPVFYVQYAYARCRSIFRQAKDI----FPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503 +NPV+YVQY AR S+ R A ++ DF P+ + D E +L+ LA Sbjct: 424 DNPVYYVQYVAARTASVGRNAAEVGLARGGSADFH-------PELLDHD-KENELLKALA 475 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM---RL 560 E+P V+ A +EP+++A YL DLA +H + + R PR + ++T + RL Sbjct: 476 EFPAVVATAAELREPHRIARYLEDLAGAYHRFYDNCRVLPR------GDEEITDLHRARL 529 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 L A +I +GL ++GV +P M Sbjct: 530 WLNDATRVVIANGLRLLGVAAPERM 554 >gi|269468159|gb|EEZ79861.1| arginyl-tRNA synthetase [uncultured SUP05 cluster bacterium] Length = 570 Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 189/579 (32%), Positives = 311/579 (53%), Gaps = 62/579 (10%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I ++ +D HG ++N A++LS+ P +A+ I+ R+ ++ IAG GFIN Sbjct: 29 IRLDHSKDKTHGDFASNIALVLSKQAKCSPQKLAQQIIDRLPNSGEIVKTEIAGPGFINF 88 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 ++S +L I+ GI YG IGKG V +EFVSANPTGP+HVGH R A G T+A Sbjct: 89 FMSQGSNTAVLEQILEQGIGYGCLDIGKGQSVLLEFVSANPTGPLHVGHGRGAAYGATVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +L+ G++V EYY+NDAG Q++ LA SV+ RY + P+ Y G Y+ + + Sbjct: 149 NLLRALGFKVDNEYYVNDAGRQMDILATSVYLRYIET-----DQFPDNGYKGDYIFDIAE 203 Query: 212 EL---------ADKYSSELLNFPEEKWL---------------PIVKDYSVQAMMKIIRD 247 ++ D + E +EK + V D ++ ++ I+ Sbjct: 204 QVKGVERLDIFTDVCADEKDGGDKEKHIDDLIANCKQALGDDYKKVFDLAIDDILSGIKT 263 Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307 DL +++ + SE D + I +L G++YE Sbjct: 264 DLSEFGVEYQQWFSEQSLI--DSGRAKTTIKSLQDSGHIYE----------------KDG 305 Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367 L F++T D+ DR +++ +G +TYFA+D+AY K+ERG+D +I + G+DH GY+ R+ Sbjct: 306 ALWFKTTDFNDEKDRVVVRDNGIHTYFASDIAYHLEKFERGYDKIINIWGADHHGYIARV 365 Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 +A A+ K ++ +LL + LYR G ++MS R+G F+TL+ + EVG+D+ RF + Sbjct: 366 KASVEALGHKSEKLEILLVQFANLYRGGKKVQMSTRSGSFVTLKELRHEVGNDAARFFYV 425 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487 RK+ + +DFD K ++ ENPVFY+QYA+AR S+ +QA + FP+ + P Sbjct: 426 LRKSEQHMDFDLDLAKSKTNENPVFYIQYAHARICSVLKQADEKFPN-------NSTAPN 478 Query: 488 ESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 S D +E+ L+ L Y V++ + + EP+ LA+YL DL++ FH +++ Sbjct: 479 LSLLDDKAEVALVKELNRYKDVLQTSALNYEPHVLAYYLRDLSASFHSYYN------SCE 532 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ + +L RL L+ + ++++GLN++GV +PN M Sbjct: 533 FL-VEDAQLRSSRLLLIKSAKQLLSNGLNLLGVSAPNSM 570 >gi|139439094|ref|ZP_01772546.1| Hypothetical protein COLAER_01553 [Collinsella aerofaciens ATCC 25986] gi|133775441|gb|EBA39261.1| Hypothetical protein COLAER_01553 [Collinsella aerofaciens ATCC 25986] Length = 617 Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 196/611 (32%), Positives = 309/611 (50%), Gaps = 74/611 (12%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 LD IERP D +HG ++ A+ ++ P IAE IVA + DP ++ V IAG GF Sbjct: 27 LDDCAIERPADTSHGEWTSTMALKSAKLAHCAPRKIAEAIVAHMPEDPAIEKVEIAGPGF 86 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 IN YLS + I G+++ ++ +G G K +EFVSANP GPMH+GH R A +GD Sbjct: 87 INFYLSVAVKNAIFGEAREKGMDFAKSNVGGGLKTQVEFVSANPVGPMHIGHGRWAALGD 146 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA-------------------- 188 +L +M +GY++ RE+YIND G+Q+NT S+ RY Q Sbjct: 147 SLCRVMDHAGYDIQREFYINDHGSQMNTFGNSISTRYMQLADIIAKQGVDIDEAHKLLIA 206 Query: 189 -----LYNNDSDLPEGY--------------YPGVYLKHVGKELADKYSSELLNFPEEKW 229 + + + + PE + Y G Y+ E + +N ++ Sbjct: 207 DRDAFVADENDEHPETHPYQDNFAETLGKDSYGGDYIIDEAAEFWRTDGDKWVNADPQER 266 Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP-------SPIRDIIDNLAR 282 + ++ M+ +RD A+N D + SE + D S + + L + Sbjct: 267 MESFRERGYVKMVDNMRDLCHAVNCDFDRWYSERSLYVKDTEGETAGTSAVDRAFEKLDK 326 Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342 GY+Y L FRST +GDD DR L+KSDG YTYFA+D+AY Sbjct: 327 MGYLY----------------TKDGALWFRSTDLGDDKDRVLIKSDGEYTYFASDVAYHW 370 Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402 K++R D++I + G+DH GY++R+ V A+ + VLL +LV L R+G P++MSK Sbjct: 371 DKFQR-VDHVIDIWGADHHGYIERVRCVCDALG-YPGKFEVLLGQLVNLLRNGKPVRMSK 428 Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462 R G +TL+ +VDEVGSD+ R+ ++ + +++++DFD VK++ NPV+YVQYA+AR Sbjct: 429 RKGTMVTLQELVDEVGSDAARYTLISKSSNQMVDFDIEAVKKRDNSNPVYYVQYAHARVC 488 Query: 463 SIFRQAKDIFP----DLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATI 514 SI R+A D+ P ++ I + ++ D +EL L L E +I + Sbjct: 489 SILRRAADVTPEQADEMGMKAVAAKAIGENVDYSLLTDPTELALSRKLNELTDLIASCAR 548 Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 + P++L + +LA FH ++ + P + + +L+ RL AV + L Sbjct: 549 DRAPFRLTHFAEELAGDFHSFYAACQVLPSEG--RPVDPELSRARLAACDAVRVTLALVL 606 Query: 575 NIIGVESPNEM 585 ++GV +P +M Sbjct: 607 TLVGVSAPEQM 617 >gi|189424202|ref|YP_001951379.1| arginyl-tRNA synthetase [Geobacter lovleyi SZ] gi|189420461|gb|ACD94859.1| arginyl-tRNA synthetase [Geobacter lovleyi SZ] Length = 564 Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 191/562 (33%), Positives = 294/562 (52%), Gaps = 36/562 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDSVFIAGKGFIN 90 +VI P AHG + N A+ L++P P +AE ++ ++ D + IAG GFIN Sbjct: 31 VVIGTPAQEAHGDFACNIALQLAKPERKSPRQVAESVLLHLQDTDGLIRRAEIAGPGFIN 90 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +++PS ++ L I +G YG G G K +EFVSANPTGP+H+GH R A +GD L Sbjct: 91 FFIAPSAWQQCLPLIEQAGPAYGTTDSGAGRKAQVEFVSANPTGPLHIGHGRGAAIGDVL 150 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 L+A +G++VTRE+Y NDAGAQI+ LALSV R + +D P Y G Y+K V Sbjct: 151 CRLLAATGWQVTREFYYNDAGAQISNLALSVQARC-LGIETDDPRWPADGYQGEYIKEVA 209 Query: 211 K-----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 E ++ + L ++ ++V A+ + DL+A +++ D + E Sbjct: 210 TAYLAGETVVAGDQQVTASGDPDDLDAIRRFAVAALRREQDQDLQAFDVRFDHYFLESSL 269 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 + + + + G+ YE L R+T GDD DR + Sbjct: 270 Y--SDGKVEAAVQQMIANGHTYE----------------QEGALWLRTTDFGDDKDRVMR 311 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--KAQINV 383 K+DG YTYF D+AY K++RGF ++ G+DH + R+ A A++ K Sbjct: 312 KTDGGYTYFVPDVAYHLDKWQRGFLRVVNEQGADHHSTITRVRAGLQALNAGIPKGWPEY 371 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443 +L ++V + R G +K+SKRAG ++TLR ++DEVG D+ RF + RK L FD K Sbjct: 372 VLHQMVTVMRGGEEVKISKRAGSYVTLRDLIDEVGRDATRFFFVMRKPDSQLVFDIDLAK 431 Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503 +QS +NPV+Y+QYA+AR SIF A D L D P + + E EL+LI L Sbjct: 432 QQSLDNPVYYIQYAHARICSIFENAADKGIHLP-DQTPDAAVLAQLE-TPEELRLIKWLE 489 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 P +++A EP+K+ +YL +LA FH +++ + V + L++ RL L+ Sbjct: 490 SLPETVDDAAQEFEPHKIVYYLTELAGQFHSYYNKSK-------VVTEDTSLSIARLYLL 542 Query: 564 HAVASIINSGLNIIGVESPNEM 585 +I + L ++GV +P +M Sbjct: 543 ARTRQVIQNALTLLGVSAPEKM 564 >gi|154249102|ref|YP_001409927.1| arginyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1] gi|154153038|gb|ABS60270.1| arginyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1] Length = 542 Score = 310 bits (795), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 193/553 (34%), Positives = 303/553 (54%), Gaps = 34/553 (6%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 V+E P + G STN A++ ++ P +A+ V ++ P D + IAG GFIN Sbjct: 24 VVEIPEE-QFGDFSTNIALVGAKYFKKAPRDVAKYFVEKLNGHPMFDEITIAGPGFINFK 82 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 +S S+ R L + + E + KG K+ +E+ SANPTGP+ VGH R V+GD L + Sbjct: 83 VSKSFYRDFLDGFLRNPREIWK-FKNKG-KIILEYGSANPTGPLTVGHGRQIVIGDVLGN 140 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 ++++ GY+VT+E Y+NDAG QI LA SV+ RYQQ L D +PE Y G Y+ + K+ Sbjct: 141 ILSYIGYDVTKEMYLNDAGRQIKLLAKSVWARYQQLL-GKDEPIPEDGYRGNYVIDIAKK 199 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 + Y + +E+ I + Y+++ + K+ L+ +N + D SE D Sbjct: 200 VLKDYGEKFDGIWDEEVEEIFRKYALEDITKMFETTLEKINAKFDNVYSEKSLI--DDGT 257 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 +++++D L +G +YE + + FR + +D D+ L+KSDGSYT Sbjct: 258 VKEVLDILESKGLIYE----------------NEGAIWFRVSDFANDNDKVLIKSDGSYT 301 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 YF D+AY K++RG+D I + GSDH G++ R+EA A++ + +L + V L Sbjct: 302 YFLTDIAYHYKKFKRGYDLAIDIFGSDHHGHLPRMEAAMKALNIPDDFLVFVLHQFVTLK 361 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 R +KMS RAG+F+T+ ++DEVG D+ R+ + L+FD K Q+ ENPV+ Sbjct: 362 RGNEVVKMSTRAGEFVTVDELIDEVGRDATRYFFAMVDVNTHLNFDLELAKSQTNENPVY 421 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 YVQYA+AR S+F A L F LF N+ E+E SE+++I ++ + ++E Sbjct: 422 YVQYAHARIASLFENA--TVKGLKFSLFD-NIELLENE---SEMRIIKLISSFDDILERV 475 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572 P+ L YL LAS FH ++S + V +N ++T RL LV AV I++ Sbjct: 476 RDKLSPHYLTDYLETLASAFHKYYS------EYKIVDQDNPEMTNARLNLVFAVKIILSE 529 Query: 573 GLNIIGVESPNEM 585 GL ++GV +P +M Sbjct: 530 GLRLLGVSTPEKM 542 >gi|302877425|ref|YP_003845989.1| arginyl-tRNA synthetase [Gallionella capsiferriformans ES-2] gi|302580214|gb|ADL54225.1| arginyl-tRNA synthetase [Gallionella capsiferriformans ES-2] Length = 558 Score = 310 bits (794), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 193/592 (32%), Positives = 313/592 (52%), Gaps = 41/592 (6%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + +F S + E ++ E+ + ++IERP+ +HG + N AM L++PL Sbjct: 1 MSVVLNFKSHITELFVEAMREVAPEQGSVS-VLIERPKQASHGDYACNLAMQLAKPLRKS 59 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P IA ++A + ++ V IAG GFINL+++ + + I+ +++ +G YG +G+G Sbjct: 60 PRDIAHALIAALPKSDVIEKVEIAGAGFINLFVTHAAKQAIVHAVLHAGAGYGHLHVGQG 119 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +V +EFVSANPTGP+HVGH R A VGD L +++ +G+ VTRE+Y NDAGAQI+ L S Sbjct: 120 RRVQVEFVSANPTGPLHVGHGRGAAVGDCLCNVLQAAGWNVTREFYYNDAGAQIDNLMRS 179 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGK-----ELADKYSSELLNFPEEKWLPIVKD 235 V R + + +D PE Y G Y+ V + E + + + ++ Sbjct: 180 VQLRC-KGITPDDPSWPEAGYRGDYIADVARAYMACETVEADDQRTTGCGDVDDVVAIRH 238 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 ++V + + DL+A +++ D+F E + + + + L G+ YE Sbjct: 239 FAVAYLRREQDLDLRAFHVEFDVFSLESALY--SEGKVDETVAGLIASGHTYE------- 289 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 L R+T GDD DR + KSDG YTYF D+AY K+ RGF +I Sbjct: 290 ---------QDDALWLRTTDFGDDKDRVMRKSDGGYTYFVPDVAYHLDKWRRGFVRVINE 340 Query: 356 MGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 G+DH + R+ A A V K + +L ++V + ++G +K+SKRAG ++TLR + Sbjct: 341 QGADHHSTITRVRAGLQALDVGIPKGWPDYVLHQMVTVLKNGEEVKISKRAGSYVTLRDL 400 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 +DEVG D+ R+ + R L FD K +S +NPV+Y+QYA+AR ++ + + Sbjct: 401 IDEVGCDATRYFLAARHPDSQLVFDIDLAKSKSNDNPVYYIQYAHARISTVL----ETWG 456 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 L NV +SE++T+ LQ I+ +YP+VIENA P+ +AFYL +LA+ FH Sbjct: 457 GERLSLLNANVSLLDSEYETALLQQII---DYPQVIENAAQELAPHLIAFYLKELAAAFH 513 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++ R V+ L Q ++ +GL ++GV +P +M Sbjct: 514 SYYNASRFLVEDEAVKCARLALIAAAAQ-------VMKNGLALLGVGAPEKM 558 >gi|296138955|ref|YP_003646198.1| arginyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162] gi|296027089|gb|ADG77859.1| arginyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162] Length = 550 Score = 310 bits (794), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 191/583 (32%), Positives = 301/583 (51%), Gaps = 38/583 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD S L + + ++ +L +R+ +ERPR+ HG +TN AM +++ G++P Sbjct: 4 ADLSELLHATATTVLTERGLDVSVLPERVTVERPRNPEHGDYATNLAMQVAKKAGVNPRD 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + +D IAG GF+N+ L+ +++ SI+ +G + Sbjct: 64 LATWLAEALASADGIDEATIAGPGFLNIRLAADAQNQLVVSILEQKDAFGHGSTLADQVI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++ G EVTREYY ND GAQI+ A S+ Sbjct: 124 NLEFVSANPTGPVHLGGARWAAVGDSLGRVLEAQGAEVTREYYFNDHGAQIDRFARSL-- 181 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 A + P+ Y G Y+ + + + +L+ P+ + + + V+ M Sbjct: 182 --DAAATGKPT--PDDGYAGDYIGEIAATVVQNHPG-ILDLPDAERVEAFRADGVELMFD 236 Query: 244 IIRDDLKALNIQHDIFISEDD-FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 I+ L +F ED+ F G + +D L QG +YE Sbjct: 237 HIKRTLHEFGTDFAVFTHEDEMFSSG---LVEQSVDQLKAQGNLYE-------------- 279 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 +ST GDD DR ++KSDG+ Y A D+AY K K++RGF IY++G+DH G Sbjct: 280 --KDGAWWLKSTDFGDDKDRVVIKSDGNAAYIAGDIAYLKHKFDRGFTLAIYMLGADHHG 337 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 Y+ RL+A AAA+ A++ VL+ +LV L +DG P++MSKRAG ITL +VD VG D+ Sbjct: 338 YIGRLKAAAAAMGYDPARVEVLIGQLVNLVKDGKPVRMSKRAGTVITLDDLVDAVGVDAA 397 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 R+ ++ +D D + + S ENPV+YVQYA+AR +I R A ++ + + Sbjct: 398 RYSLIRSSVDTSIDLDLDLLTQASNENPVYYVQYAHARLSAIARSAAELGIEGSTEHLGL 457 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 P+E + L+ L E+P V A +EP+++A YL +LA +H +S R Sbjct: 458 LDNPREGD-------LVRTLGEFPGVAAAAASLREPHRVARYLEELAGAYHRFYSECRVL 510 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P L R+ L A ++ +GL+++GV +P+ M Sbjct: 511 P---LGDEEPTDLHRARVALCAATRQVLANGLSLVGVSAPDRM 550 >gi|308177030|ref|YP_003916436.1| arginine--tRNA ligase [Arthrobacter arilaitensis Re117] gi|307744493|emb|CBT75465.1| arginine--tRNA ligase [Arthrobacter arilaitensis Re117] Length = 547 Score = 310 bits (794), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 191/584 (32%), Positives = 317/584 (54%), Gaps = 45/584 (7%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 + S+ + L E ++ ++ + + ++RP+ HG +TN A+ L + G+ P A Sbjct: 5 ELSAAISACLTEAVAAGEISVEVPETVRVDRPKSREHGDWATNIALQLGKKAGMAPRDFA 64 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 +++ R+ P V +V IAG GF+N+ L ++ +IV +G YG N G VN+ Sbjct: 65 QILATRLASVPGVGAVDIAGPGFLNITLEAGAAGELARTIVEAGSAYGSNEALAGHVVNM 124 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+H+GH R A +GD ++ ++ SG VT EYYINDAG Q+N A SV+ R Sbjct: 125 EFVSANPTGPLHIGHTRWAALGDAISRVLRASGASVTSEYYINDAGNQMNVFARSVYNRI 184 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245 +PEG YPG Y+K +G + + + EL + E + +P ++D + +A + I Sbjct: 185 HGL------PVPEGGYPGEYIKELGDAVLAE-NPELKDLEEAEAIPALRDAAYKAQLADI 237 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 + L + D+F SE H + + D + L QG+++ D++ Sbjct: 238 KSTLADFGVSFDVFFSETTLH--ERGAVADAVARLREQGHIF---------------DLE 280 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365 + R+T GDD DR L++++G TYFAAD AY+ K +RGF+ IY++G+DH GYV Sbjct: 281 -GAVWLRTTDFGDDKDRVLIRANGEPTYFAADAAYYLSKKDRGFEEKIYLLGADHHGYVN 339 Query: 366 RLEAVAA-AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 RL+A+AA A +K I VL+ +L+ + +G K+SKRAG+ I LR +++ +G+D++R+ Sbjct: 340 RLKAIAACAGDDKDKNIEVLIGQLISV--NGA--KLSKRAGNIIELRDLINWIGADALRY 395 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 + + D ++K+ + +NPVFYVQYA+AR + R A RN Sbjct: 396 SLARFPADSPIALDPEQLKKNTNDNPVFYVQYAHARSAAAARNAA-------AKGVTRND 448 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 D +E +L+ L ++P V+ + +EP+++A YL +A +H ++ R P Sbjct: 449 FDAALLTDPTENELLAVLGQFPSVVAGSAEFREPHRIARYLEQVAGAYHSWYAATRITP- 507 Query: 545 LRFVQANNRKLTMM---RLQLVHAVASIINSGLNIIGVESPNEM 585 + + + RL L A +++ +GL ++GV +P M Sbjct: 508 ----MGEDEAIAPVHGTRLWLNDAATTVLANGLELLGVSAPERM 547 >gi|331695512|ref|YP_004331751.1| Arginyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190] gi|326950201|gb|AEA23898.1| Arginyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190] Length = 547 Score = 310 bits (794), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 190/558 (34%), Positives = 284/558 (50%), Gaps = 42/558 (7%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 D + +ERPR+ HG +TN A+ ++ G++P +A + + + S IAG GFI Sbjct: 30 DDVGVERPRNPEHGDYATNVALRTAKKAGVNPRDLATWLAEALAARDGIASAEIAGPGFI 89 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 NL L+ ++ ++ +G YG G VN+EFVSANPTGP+H+G R A VGD Sbjct: 90 NLRLASDAQGAMVGQVLAAGAAYGTGDELAGRSVNLEFVSANPTGPLHLGGTRWAAVGDA 149 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 L +++ G VTREYY NDAG QI+ S+ + PE Y G Y+ + Sbjct: 150 LGRILSARGAAVTREYYFNDAGGQIDRFVASLVAAAKG------EPAPENGYGGAYIADI 203 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 + L+ PE + + V M I+ DL D++ ED H+ Sbjct: 204 AARVV-AAEPGALDSPERD--EVFRRVGVGFMFDEIKSDLHDFGTDFDVWFHEDSLHK-- 258 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + + L G +YE RST GDD DR ++KSDG Sbjct: 259 SGAVERSVQELKNSGALYE----------------KDGAWWLRSTEHGDDKDRVVIKSDG 302 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 Y A D+AYF+ K RGFD +IY++G+DH GY+ RL+A AAA + A + VL+ ++V Sbjct: 303 RPAYIAGDIAYFRDKRARGFDLLIYMLGADHHGYIGRLKAAAAAFGDDPAVVEVLIGQMV 362 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 L +DG P++MSKRAG +T+ +V+ VG D+ R+ ++ +LD D + +S +N Sbjct: 363 NLVKDGTPVRMSKRAGTVVTMNDLVEAVGVDAARYSLIRSSVDSVLDVDLDLLVRRSNDN 422 Query: 450 PVFYVQYAYARCRSIFRQAKDI--FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 PVFYVQYA+AR S+ R A D+ P ++F L P+E + LI + E+P Sbjct: 423 PVFYVQYAHARLASLARNAADVGLTPGVEFGLLEH---PREGD-------LIRTIGEFPE 472 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 V+ A +EP+++A YL LAS +H + R P +L RL L A Sbjct: 473 VVRAAAELREPHRVARYLESLASAYHKFYDACRVLP---LGDEEITELHRARLALCVAAR 529 Query: 568 SIINSGLNIIGVESPNEM 585 ++ +GL ++GV +P M Sbjct: 530 QVLANGLELLGVSAPERM 547 >gi|293611162|ref|ZP_06693460.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826413|gb|EFF84780.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 596 Score = 310 bits (793), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 191/597 (31%), Positives = 311/597 (52%), Gaps = 77/597 (12%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 + R +D +HG ++N AMI S+ G+ P +AE ++A + D+ IAG GFIN +L Sbjct: 32 LTRTKDRSHGDFASNIAMIGSKAAGMKPRDLAEKVLAALPEVADISKAEIAGPGFINFFL 91 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + IL I +GR+ K+ +EFVSANPT +HVGH R A G T+A+L Sbjct: 92 NADQRFAILDQIQAQKEIFGRSQANAAKKIQVEFVSANPTSSLHVGHGRGAAYGMTVANL 151 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + +G +V REYY+NDAG Q++ LA S + RY + L N P+ Y G Y+K + + + Sbjct: 152 LEATGAKVDREYYVNDAGRQMDILATSTYLRYLELLGQNLV-FPKNAYQGDYVKEIAQGI 210 Query: 214 ADK---------------------YSSEL--------LNFPEEKWLP------------- 231 DK Y+ EL L+ +EK + Sbjct: 211 IDKDGDAYVREVANVYKDVPEDVQYAEELDSEGNKVVLSGDKEKHIDGLIANSQQLLGEG 270 Query: 232 --IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 + ++ A++ I+DDL + + + SE + I + ++ L ++G++Y+ Sbjct: 271 YRVFHQAALHAILDDIKDDLADFGVTFNQWFSEASL----SAKIDEALETLDQRGFLYQ- 325 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349 + F+ST GD+ DR + + +G TYFA+D+AY K +RG+ Sbjct: 326 ---------------KDGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGY 370 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 ++I + GSDH GY+ R++A A+ ++ VLL + V L+R G ++MS R+G F+T Sbjct: 371 TDLIDIWGSDHHGYISRVKAAIDAMGYDSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVT 430 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQA 468 LR + EVG+D+ RF + RK+ + +DFD QSK+N V+Y+QYA+AR CR + Sbjct: 431 LRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARICRML---E 487 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 K + DL FD+ D +E++++ LA YP + A A EP+++ YL +L Sbjct: 488 KAVSTDLQFDVNAARPHAARLSLD-AEIEILAKLAAYPDTVLRAANAYEPHQVGNYLKEL 546 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A++FHG ++ + V +++ +LT RL L V ++ +GL ++GV +P M Sbjct: 547 AALFHGWYNEHK-------VLSDDAELTQARLLLSINVQQVLRNGLELLGVSAPESM 596 >gi|325673536|ref|ZP_08153227.1| arginine--tRNA ligase [Rhodococcus equi ATCC 33707] gi|325555557|gb|EGD25228.1| arginine--tRNA ligase [Rhodococcus equi ATCC 33707] Length = 550 Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 190/582 (32%), Positives = 300/582 (51%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + L+ ++ + ++ +L + +ERPR+ HG ++N AM +++ G +P Sbjct: 4 ADLAELLRGTAAKVLAEHGLDVSVLPATLTVERPRNPEHGDYASNVAMQVAKKAGANPRD 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + A + +DS +AG GF+N+ L+ I++ + SG YG G ++ Sbjct: 64 LATWLAAALAASDGIDSAEVAGPGFLNIRLAADAQGAIVAKALESGAAYGAGDALAGKRI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L ++A G +VTREYY ND GAQI+ S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRILATQGGDVTREYYFNDHGAQIDRFTRSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 Q PE Y G Y+ + ++ K L+ PE + + V+ M + Sbjct: 184 AAQG------EPAPEDGYAGAYIVDIAADV-QKQVPGALDLPEAERHETFRSIGVELMFE 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L + D++ E+ + + ++ L G +Y Sbjct: 237 HIKRTLHEFGVDFDVYFHENSLF--ESGAVERAVETLKGSGNLYH--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 + +ST GDD DR ++KSDG+ Y A D+AYF+ K RGFD IY++G+DH GY Sbjct: 280 -EDGAWWLKSTDFGDDKDRVVIKSDGNAAYIAGDIAYFQDKRARGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA + + V++ ++V L R G+ +KMSKRAG ITL +V+ +G D+ R Sbjct: 339 IGRLKAAAAAFGDDPDTVEVMIGQMVNLVRGGVAVKMSKRAGTVITLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ + +D D + ENPV+YVQYA+AR SI R A D+ L + Sbjct: 399 YSLVRSSVDQSIDIDLELWASTTNENPVYYVQYAHARLCSIARNAADL--GLGTENPNLG 456 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ + E D LI +AEYPRV+ A +EP+++A YL +LA +H + R P Sbjct: 457 LLTHDREGD-----LIRTIAEYPRVVAKAAELREPHRIARYLEELAGTYHRFYDACRILP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + LT RL L A ++ +GL ++GV +P M Sbjct: 512 Q---GDEEATDLTTARLALCAASRQVLANGLELLGVSAPERM 550 >gi|291302994|ref|YP_003514272.1| arginyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728] gi|290572214|gb|ADD45179.1| arginyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728] Length = 550 Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 189/559 (33%), Positives = 293/559 (52%), Gaps = 47/559 (8%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +ERPR HG S+N ++ +++ G P +AE I A ++ + +V IAG GF+N+ Sbjct: 33 TVERPRVAEHGDYSSNISLQVAKKAGKPPRELAEAIAANLRAVEGIAAVDIAGPGFLNIK 92 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L + + I+ +G YG N G K+N+EFVSANPTGP+H+G R A VGD L Sbjct: 93 LDAAATGAVAGKIIEAGDTYGHNDSLNGQKLNLEFVSANPTGPIHIGSVRWAAVGDALGR 152 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 +++ SG EVT EYY+NDAG Q++ S+ + +P Y G Y+K + K+ Sbjct: 153 VISASGAEVTTEYYVNDAGVQMDLFGASLLAAAKG------EPVPADGYQGDYVKDIAKQ 206 Query: 213 L-ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 + AD+ ELL + + + + M+ I+ L + D++ SE H D Sbjct: 207 IVADR--PELLTSDDPR--QGFRQAGLDLMLAEIKRSLADFGVHFDVYFSEKQLH--DGG 260 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 I + L G +E L R+T GDD DR L K DG++ Sbjct: 261 DIDAAVAKLTELGATFE----------------SEGALWLRTTDHGDDKDRVLRKEDGTW 304 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK-KAQINVLLCELVR 390 TYFAAD AY++ K +RGFD ++Y++G+DH GY+ R++A++A + A I +L+ +LV Sbjct: 305 TYFAADAAYYRDKRQRGFDPLVYMLGADHHGYIGRMKALSACFGDDPNATIEILIGQLVN 364 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L +DG P++MSKRAG TL V +GSD+ R+ + + +D D S +NP Sbjct: 365 LKKDGQPLRMSKRAGTITTLDEFVAALGSDAGRYALARYSSDSTIDLDLDLWTSASNDNP 424 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI-PQESEFDTSELQLIVHLAEYPRVI 509 V+YVQYA+AR S+ R A ++ P+ + P+ES+ L+ LA +P+V+ Sbjct: 425 VYYVQYAHARIASLLRNAGELGLSRGESYDPKLLDHPRESD-------LLKQLAGFPKVV 477 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT---MMRLQLVHAV 566 A +EP+++A Y DLA +H + R PR + + T RL LV A Sbjct: 478 ATAAELREPHRVARYAEDLAGAYHRFYDACRVLPR------GDEEFTDTGAARLWLVEAT 531 Query: 567 ASIINSGLNIIGVESPNEM 585 ++ + L ++GV +P M Sbjct: 532 RVVLANALRLLGVSAPERM 550 >gi|312876814|ref|ZP_07736792.1| arginyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A] gi|311796433|gb|EFR12784.1| arginyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A] Length = 561 Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 196/558 (35%), Positives = 313/558 (56%), Gaps = 36/558 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90 I+IE+P++ +HG +TN AM L+R L +P IA+ I++ + + ++ V +AG GFIN Sbjct: 36 IMIEKPKEKSHGDFATNIAMELTRKLKKNPREIAQSILSSVDLSNTFIEKVEVAGPGFIN 95 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + +L K++ I+ G +YG+ IG G KV +EFVSANPTGPMH+G+ R +GD L Sbjct: 96 FFFKKDWLYKVVDVILSEGDDYGKVNIGNGKKVMVEFVSANPTGPMHMGNARGGALGDCL 155 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+L+ ++GY VT+E+Y+NDAG QI S+ RY+Q L + +LPE Y G + Sbjct: 156 ANLLKWAGYNVTKEFYVNDAGNQIEKFGQSLEIRYRQ-LKGENIELPEDCYHGEDIIERV 214 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 KE D++ +L N ++ + D++++ + ++++ L+ I++D++ E + + Sbjct: 215 KEYLDEHGDDLENLSSDERREKLVDFALKRNISLMKEHLRKYGIEYDVWFHESSLY--ES 272 Query: 271 SPIRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 + + I++L +GY YE G L SK + D L++++ Sbjct: 273 GEVFETIEDLKSRGYTYEKDGALWFAASKIDESLK-----------------DEVLIRAN 315 Query: 329 GSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387 G TYFAAD+AY + K+E RGFD +I + G+DH G+V R++A A+ ++ V+L + Sbjct: 316 GIPTYFAADIAYHRNKFEKRGFDIVIDIWGADHHGHVARMKAAMKALGIDPERLIVILMQ 375 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 LVRL R ++MSKR G ITL ++DE+G D+ RFM + ++ D V +Q+ Sbjct: 376 LVRLVRGKEIVRMSKRTGKAITLIDLIDEIGKDAARFMFNTKSADTHIEIDLDLVTQQTL 435 Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 +NPVFYVQYA+AR I R + LD ++ I E EL+L+ L E P Sbjct: 436 DNPVFYVQYAHARTCGILRALSEEGIVLD-----KSKIKVELLQQEEELELLKKLLELPE 490 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 IE A + ++ YL DLAS+FH ++ R V+ N L RL LV V Sbjct: 491 EIEIAAKNLDVSRVTKYLLDLASMFHAFYNACR-------VKNENEDLMFTRLSLVECVR 543 Query: 568 SIINSGLNIIGVESPNEM 585 +I + L ++GV++P +M Sbjct: 544 IVIKNMLRLLGVDAPEKM 561 >gi|312139159|ref|YP_004006495.1| arginyl-tRNA ligase args [Rhodococcus equi 103S] gi|311888498|emb|CBH47810.1| arginyl-tRNA ligase ArgS [Rhodococcus equi 103S] Length = 550 Score = 310 bits (793), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 190/582 (32%), Positives = 300/582 (51%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + L+ ++ + ++ +L + +ERPR+ HG ++N AM +++ G +P Sbjct: 4 ADLAELLRGTAAKVLAEHGLDVSVLPATLTVERPRNPEHGDYASNVAMQVAKKAGANPRD 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + A + +DS +AG GF+N+ L+ I++ + SG YG G ++ Sbjct: 64 LATWLAAALAASDGIDSAEVAGPGFLNIRLAADAQGAIVAKALESGAAYGAGDALAGKRI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L ++A G +VTREYY ND GAQI+ S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRILATQGGDVTREYYFNDHGAQIDRFTRSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 Q PE Y G Y+ + ++ K L+ PE + + V+ M + Sbjct: 184 AAQG------EPAPEDGYAGAYIVDIAADV-QKQVPGALDLPEAERHETFRSIGVELMFE 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L + D++ E+ + + ++ L G +Y Sbjct: 237 HIKRTLHEFGVDFDVYFHENSLF--ESGAVERAVETLKGSGNLYH--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 + +ST GDD DR ++KSDG+ Y A D+AYF+ K RGFD IY++G+DH GY Sbjct: 280 -EDGAWWLKSTDFGDDKDRVVIKSDGNAAYIAGDIAYFQDKRARGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA + + V++ ++V L R G+ +KMSKRAG ITL +V+ +G D+ R Sbjct: 339 IGRLKAAAAAFGDDPDTVEVMIGQMVNLVRGGVAVKMSKRAGTVITLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ + +D D + ENPV+YVQYA+AR SI R A D+ L + Sbjct: 399 YSLVRSSVDQSIDIDLELWASTTNENPVYYVQYAHARLCSIARNAADL--GLGTENPNLG 456 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ + E D LI +AEYPRV+ A +EP+++A YL +LA +H + R P Sbjct: 457 LLTHDREGD-----LIRTIAEYPRVVAKAAELREPHRIARYLEELAGTYHRFYDACRILP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + LT RL L A ++ +GL ++GV +P M Sbjct: 512 Q---GDEEATGLTTARLALCAASRQVLANGLELLGVSAPERM 550 >gi|311740633|ref|ZP_07714460.1| arginine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035] gi|311304153|gb|EFQ80229.1| arginine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035] Length = 550 Score = 309 bits (792), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 190/582 (32%), Positives = 308/582 (52%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD ++ +K ++ +++ +L + + +ERPR+ HG +TN A+ +++ G +P Sbjct: 4 ADLATLIKETAVKVMESHELDSSVLPETVTVERPRNPEHGDYATNVALQVAKKAGANPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 + + + + V IAG GFIN+ L+ +I++ I+ +G EYG N G KV Sbjct: 64 LGGWLAEALADNDAVAEADIAGPGFINIRLAADAQGEIVAQILRAGKEYGSNDSFAGKKV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++ SG +VTREYY ND G QI+ + S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAQVTREYYFNDHGGQIDRFSRSLVA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y++ + + + +K S L EE D V+ M Sbjct: 184 AAK------GEPTPEDGYGGAYIQDIAQAVVEKNPSALEGSDEEVQEAFRAD-GVEMMFA 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L + D++ E+ + + ++ L +G++YE Sbjct: 237 QIKQSLHEFGVDFDVYFHENSLF--ESGAVDAALEKLKAEGHMYEA-------------- 280 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 +ST GD DR ++KSDG+ Y A D+AY K++RG D IY++G+DH GY Sbjct: 281 --ENAWWLKSTDYGDSKDRVVVKSDGNAAYIAGDIAYVADKFDRGHDLNIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 V RL+A AAA+ + VL+ +LV L RDG P++MSKRAG IT+ +V +G D+ R Sbjct: 339 VPRLKAAAAALGYNADAVEVLIGQLVNLLRDGKPVRMSKRAGTVITMEDLVAAIGVDASR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ + +D D + QS +NPV+YVQY +AR SI R+A ++ +D + + Sbjct: 399 YSLVRSSVDQSIDIDLGLWESQSSDNPVYYVQYGHARLCSIGRKAAEL--GVDSEGADLS 456 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ + E D LI L E+P V+E A +EP+++A Y DLA+VFH + + P Sbjct: 457 LLTHDREGD-----LIRTLGEFPAVVEEAAQLREPHRIARYAEDLAAVFHRFYDSCQVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + RL L A ++ + L ++GV +P +M Sbjct: 512 K---AGEDEAPIHGARLALAQASRVVLANALTMVGVSTPEKM 550 >gi|299771958|ref|YP_003733984.1| arginyl-tRNA synthetase [Acinetobacter sp. DR1] gi|298702046|gb|ADI92611.1| arginyl-tRNA synthetase [Acinetobacter sp. DR1] Length = 596 Score = 309 bits (792), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 192/598 (32%), Positives = 310/598 (51%), Gaps = 79/598 (13%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 + R +D +HG ++N AMI S+ G+ P +AE ++A + D+ IAG GFIN +L Sbjct: 32 LTRTKDRSHGDFASNIAMIGSKAAGMKPRDLAEKVLAALPEVTDISKAEIAGPGFINFFL 91 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + IL I +GR+ K+ +EFVSANPT +HVGH R A G T+A+L Sbjct: 92 NADQRFAILDQIQAQKEIFGRSQANAAKKIQVEFVSANPTSSLHVGHGRGAAYGMTVATL 151 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + +G +V REYY+NDAG Q++ LA S + RY + L N P+ Y G Y+K + + + Sbjct: 152 LEATGAKVDREYYVNDAGRQMDILATSTYLRYLELLGQNLV-FPKNAYQGDYVKEIAQTI 210 Query: 214 ADK---------------------YSSEL--------LNFPEEKWLP------------- 231 DK Y+ EL L+ +EK + Sbjct: 211 IDKDGDAYLREVADVYKDVPEDVQYAEELDSDGNKVVLSGDKEKHIDGLIANSQQLLGEG 270 Query: 232 --IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 + ++ A++ I+DDL + + + SE + I + ++ L ++G++YE Sbjct: 271 YRVFHQAALHAILDDIKDDLADFGVTFNQWFSEASL----SAKIDEALETLDQRGFLYE- 325 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349 + F+ST GD+ DR + + +G TYFA+D+AY K +RG+ Sbjct: 326 ---------------KDGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGY 370 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 ++I + GSDH GY+ R++A A+ ++ VLL + V L+R G ++MS R+G F+T Sbjct: 371 TDLIDIWGSDHHGYISRVKAAIDAMGYDSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVT 430 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQA 468 LR + EVG+D+ RF + RK+ + +DFD QSK+N V+Y+QYA+AR CR + + A Sbjct: 431 LRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARICRMLEKAA 490 Query: 469 KDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 P FD+ P + +E +++ LA YP + A A EP++L YL + Sbjct: 491 STNLP---FDV--NTARPHAARLSLDAETEILAKLAAYPDAVLRAANAYEPHQLGNYLKE 545 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA++FHG ++ + V +++ +LT RL L V ++ +GL ++GV +P M Sbjct: 546 LAALFHGWYNEHK-------VLSDDAELTQARLLLSINVQQVLRNGLELLGVSAPESM 596 >gi|332654228|ref|ZP_08419972.1| arginine--tRNA ligase [Ruminococcaceae bacterium D16] gi|332517314|gb|EGJ46919.1| arginine--tRNA ligase [Ruminococcaceae bacterium D16] Length = 582 Score = 309 bits (792), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 195/574 (33%), Positives = 306/574 (53%), Gaps = 46/574 (8%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFI 89 + IE P+D AHG +++ AM ++ L P IA+ IV ++++ V IAG GF+ Sbjct: 36 KATIEIPKDTAHGDYASSFAMAGAKALHKAPRAIAQAIVDNLELEGSYFQKVEIAGPGFL 95 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N L P + ++LS++ G EYG N G G KV +EFVSANPTGPMH+G+ R V+GDT Sbjct: 96 NFTLGPKWYGEVLSAVEQEGAEYGANTEGNGEKVMVEFVSANPTGPMHMGNARGGVLGDT 155 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKH 208 LA+++ G +E+Y+NDAG QI+ A+S+ RY Q + ++ PE Y G +K Sbjct: 156 LANVLKRDGCNTWKEFYVNDAGNQIHKFAVSINARYMQLIVGEENFPFPEEGYHGDDIKE 215 Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 + + + DK+ + PEE+ L + +Y + + + DLK I +D + E H Sbjct: 216 LAQAIYDKHGDSWKDLPEEERLDKLAEYGLSVNIPRMESDLKRYGIVYDQWFFESSLH-- 273 Query: 269 DPSPIRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 + + + ++ L ++G+ YE G L +K K+ R + VD+ LK Sbjct: 274 NSGYVAETVELLEKKGWTYEKDGALWLNTTKLL-------KEKFMREGKTQEQVDKLDLK 326 Query: 327 SD------GSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKK 378 D G YTYFAAD+AY + K RGFD I + G+DH G+V RL+A + + Sbjct: 327 DDVLRRGNGFYTYFAADIAYHRNKLAVRGFDKAINIWGADHHGHVARLQAALDGLGLDGS 386 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438 ++ V+L +LV L +DG P++MSKR+G I L ++DE+ D+ R+ R ++ LDFD Sbjct: 387 HRLVVVLMQLVNLMQDGKPVRMSKRSGKTIALHDLLDEISVDAARYFFNSRASTSPLDFD 446 Query: 439 FCKVKEQSKENPVFYVQYAYAR-CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS--- 494 + ENPV+YVQYA+AR C I R A++ +PQ + D + Sbjct: 447 LDLAVREDSENPVYYVQYAHARICSLIARLAEE-----------GAQVPQAGDVDAAVLN 495 Query: 495 ---ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551 EL LI LA++P I A +P ++ YL LA FH ++ R ++ Sbjct: 496 TPEELALIKALAQFPEEIHLAARDYDPSRINRYLVALAGDFHRFYNACR-------IKGE 548 Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ RL+L V S++ +G+ ++GV +P +M Sbjct: 549 EPQVLGARLKLADTVRSVLANGMGLLGVSAPEKM 582 >gi|74318800|ref|YP_316540.1| arginyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259] gi|109895051|sp|Q3SF80|SYR_THIDA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|74058295|gb|AAZ98735.1| arginyl-tRNA synthetase, class Ic [Thiobacillus denitrificans ATCC 25259] Length = 557 Score = 309 bits (792), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 202/560 (36%), Positives = 288/560 (51%), Gaps = 42/560 (7%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 IERP++ HG S+NAAM L+RPL +P +A+LIV + V IAG GFIN +L Sbjct: 32 IERPKNPTHGDFSSNAAMQLARPLKRNPRELAQLIVTELPASTLVAKADIAGAGFINFHL 91 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 +P+ I+ + +G ++GR +V IEFVSANPTGP+HVGH R A +GD L +L Sbjct: 92 TPAAWHGIVRQVRTAGAQFGRAQRETPQRVLIEFVSANPTGPLHVGHGRQAALGDALCNL 151 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE- 212 A G++V RE+Y NDAG QI TLA SV R + L D+ PE Y G Y+ + ++ Sbjct: 152 YAAQGWDVYREFYYNDAGVQIATLAASVQAR-ARGLQPGDATWPEAAYNGDYIADIARDF 210 Query: 213 LADKY----SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 LA K E + L ++ ++V + DL+A + D + E + Sbjct: 211 LAGKTVKSDDREFTASGDVDDLDSIRQFAVAYLRHEQDLDLRAFAVHFDNYYLESSLYTD 270 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 + + L G YE L R+T GDD DR + KSD Sbjct: 271 --GRVDATVQRLVAAGKTYE----------------QDGALWLRTTEYGDDKDRVMKKSD 312 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLLC 386 G+YTYF D+AY K+ERGF I + G+DH G + R+ A AA+V + + LL Sbjct: 313 GTYTYFVPDVAYHIAKWERGFARAINIQGTDHHGTIARVRAGLQAASVGIPEGYPDYLLH 372 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446 +VR+ R G +K+SKRAG ++TLR +++ D+VRF +L RK FD ++ Sbjct: 373 TMVRVMRGGEEVKISKRAGSYVTLRDLIEWTSKDAVRFFLLSRKADTEYVFDIDLALARN 432 Query: 447 KENPVFYVQYAYAR-CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 +NPV+YVQYA+AR CR + D+ D DL P EL L+ LAEY Sbjct: 433 NDNPVYYVQYAHARICRVFEEWSGDVATLADADLAPLEA--------AHELALMQRLAEY 484 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 P + +A P+ L YL LA FH W + +F+ A+ RL L A Sbjct: 485 PETVASAARDLAPHLLVHYLQMLAGDFHA-WYNAE-----KFLVADE-ATKRARLALADA 537 Query: 566 VASIINSGLNIIGVESPNEM 585 +I +GL ++GV++P +M Sbjct: 538 TRIVIVNGLALLGVDAPEKM 557 >gi|323516220|gb|ADX90601.1| arginyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715] Length = 596 Score = 309 bits (792), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 191/597 (31%), Positives = 310/597 (51%), Gaps = 77/597 (12%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 + R +D +HG ++N AMI S+ G+ P +AE I+A + D+ IAG GFIN +L Sbjct: 32 LTRTKDRSHGDFASNIAMIGSKAAGMKPRDLAEKILAALPEVADISKAEIAGPGFINFFL 91 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + IL I +GR+ K+ +EFVSANPT +HVGH R A G T+A+L Sbjct: 92 NADQRFAILDQIQAQKESFGRSQSNAAKKIQVEFVSANPTSSLHVGHGRGAAYGMTVANL 151 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + +G +V REYY+NDAG Q++ LA S + RY + L N P+ Y G Y+K + + + Sbjct: 152 LEATGAKVDREYYVNDAGRQMDILATSTYLRYLELLGQNLV-FPKNAYQGDYVKEIAQGI 210 Query: 214 ADK---------------------YSSEL--------LNFPEEKWLP------------- 231 DK Y+ EL L+ +EK + Sbjct: 211 IDKDGDAYVREVANVYKDVPEDVQYAEELDSEGNKVVLSGDKEKHIDGLIANSQQLLGEG 270 Query: 232 --IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 + ++ A++ I+DDL + + + SE + I + ++ L ++G++YE Sbjct: 271 YRVFHQAALHAILDDIKDDLADFGVTFNQWFSEASL----SAKIEEALETLDQRGFLYE- 325 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349 + F+ST GD+ DR + + +G TYFA+D+AY K +RG+ Sbjct: 326 ---------------KDGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGY 370 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 +++ + GSDH GY+ R++A A+ ++ VLL + V L+R G ++MS R+G F+T Sbjct: 371 TDLVDIWGSDHHGYISRVKAAIDAMGYDSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVT 430 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQA 468 LR + EVG+D+ RF + RK+ + +DFD QSK+N V+Y+QYA+AR CR + + A Sbjct: 431 LRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARICRMLEKAA 490 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 L F++ D +E +++ LA YP V+ A A EP+++ YL +L Sbjct: 491 S---TGLQFEVSAARSHAARLSLD-AETEILAKLAAYPDVVLRAANAYEPHQVGNYLKEL 546 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A++FHG ++ + V +++ +LT RL L V ++ +GL ++GV +P M Sbjct: 547 AALFHGWYNEHK-------VLSDDAELTQARLLLSINVQQVLRNGLELLGVSAPEAM 596 >gi|83721308|ref|YP_440913.1| arginyl-tRNA synthetase [Burkholderia thailandensis E264] gi|167579622|ref|ZP_02372496.1| arginyl-tRNA synthetase [Burkholderia thailandensis TXDOH] gi|167617702|ref|ZP_02386333.1| arginyl-tRNA synthetase [Burkholderia thailandensis Bt4] gi|257140433|ref|ZP_05588695.1| arginyl-tRNA synthetase [Burkholderia thailandensis E264] gi|109894978|sp|Q2T1N6|SYR_BURTA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|83655133|gb|ABC39196.1| arginyl-tRNA synthetase [Burkholderia thailandensis E264] Length = 594 Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 203/611 (33%), Positives = 315/611 (51%), Gaps = 65/611 (10%) Query: 11 LKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 L+N +K++ K + +L I +ERP+ AHG ++ N A+ L++PLG +P +AE Sbjct: 13 LENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQLAER 72 Query: 68 IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 IVA + P VD+ IAG GFINL L+P+ + ++ ++ G +G + G +V Sbjct: 73 IVAALTAQPAAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVFAQGRAFGASEREHGKRV 132 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA+S Sbjct: 133 LLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAISTQA 192 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPIVKDYS 237 R + L D+ PE Y G Y+ + G+ +A + + L ++ ++ Sbjct: 193 R-ARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRDADDLEAIRKFA 251 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 V + + DLKA ++ D + E + + +D L G YE Sbjct: 252 VAYLRREQDMDLKAFGVKFDQYYLESSLY--TEGRVEKTVDALIAAGMTYE--------- 300 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 L R+T GDD DR + K+DG+YTYF D+AY K+ERGF +I + G Sbjct: 301 -------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVINIQG 353 Query: 358 SDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV- 414 SDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+R ++ Sbjct: 354 SDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVRDLIE 413 Query: 415 ----------------DEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454 DE G D+VRF ++ RK FD +Q+ ENPV+YV Sbjct: 414 WSGGATPGSEVSPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYV 473 Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514 QYA+AR S+ + K + D L ++ P +S+ + L+ LAEYP V+ +A Sbjct: 474 QYAHARICSVLNEWKSRYGATDALLPGADLSPLDSK---QAMALMQKLAEYPDVLAHAAN 530 Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 P+ +AFYL +LAS FH ++ R V + R+ L+ A ++ +GL Sbjct: 531 ELAPHAVAFYLRELASEFHSFYNAER-------VLVDEEAPRTARIALLAATRQVLENGL 583 Query: 575 NIIGVESPNEM 585 ++GV +P++M Sbjct: 584 AMLGVSAPSKM 594 >gi|50083449|ref|YP_044959.1| arginyl-tRNA synthetase [Acinetobacter sp. ADP1] gi|81393974|sp|Q6FFM0|SYR_ACIAD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|49529425|emb|CAG67137.1| arginyl-tRNA synthetase [Acinetobacter sp. ADP1] Length = 596 Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 187/597 (31%), Positives = 307/597 (51%), Gaps = 75/597 (12%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 + R +D +HG ++N AM+ S+ G+ P +AE I+A + D+ IAG GFIN + Sbjct: 31 TLTRTKDRSHGDFASNIAMVGSKAAGMKPRDLAEKILASLPEVADITKAEIAGPGFINFF 90 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L+ +L I G YG+ + K+ +EFVSANPT +HVGH R A G T+A+ Sbjct: 91 LNADQRFAVLDQIQAQGQYYGQTQVNAEKKIQVEFVSANPTSSLHVGHGRGAAYGMTVAN 150 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 L+ +G +V REYY+NDAG Q++ LA S + RY + L P+ Y G Y+K + + Sbjct: 151 LLEATGAQVDREYYVNDAGRQMDILATSTYLRYLE-LLGQPLVFPKNAYQGDYVKEIAQS 209 Query: 213 LADK---------------------YSSEL--------LNFPEEKWLP------------ 231 + DK Y+ EL L+ +EK + Sbjct: 210 IIDKDGDAYVRSVADVYRNVPEDVQYAEELDSEGNKVVLSGDKEKHIDGLIANSQQLIGQ 269 Query: 232 ---IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288 + +++A++ I+DDL + D + SE I + + L ++GY+YE Sbjct: 270 GYRVFHQAALKAILDDIKDDLADFGVTFDQWFSEASL----TQKIDEALQTLDQRGYLYE 325 Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348 + F+ST GD+ DR + + +G TYFA+D+AY K +RG Sbjct: 326 ----------------KEGNIWFKSTKFGDEKDRVVKRRNGQTTYFASDIAYHLDKLQRG 369 Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 + +++ + GSDH GY+ R++A A+ +++ VLL + V L+R G ++MS R+G F+ Sbjct: 370 YTHIVDIWGSDHHGYIARVKAAIDAMGYDSSKLTVLLVQFVSLWRGGEMVQMSSRSGQFV 429 Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 TLR + EVG+D+ RF + RK+ + +DFD QSK+N V+Y+QYA+AR + +A Sbjct: 430 TLRELRQEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARICRMLEKA 489 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 + F+ + D +E +++ LA YP ++ A A EP+++ YL +L Sbjct: 490 NS--TQMRFNQTQARQFANRLDLD-AETEILAKLAAYPDILVRAANAYEPHQIGNYLKEL 546 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A++FHG ++ + V + +LT RL L V ++ +GL+++GV +P M Sbjct: 547 AALFHGWYNEHK-------VLTEDVELTQARLLLSVNVQQVLRNGLDLLGVSAPEAM 596 >gi|320527004|ref|ZP_08028193.1| arginyl-tRNA synthetase [Solobacterium moorei F0204] gi|320132589|gb|EFW25130.1| arginyl-tRNA synthetase [Solobacterium moorei F0204] Length = 557 Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 200/598 (33%), Positives = 305/598 (51%), Gaps = 63/598 (10%) Query: 4 FADFSSRLKNYLKEIDCK---IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 +DF S++ + ++E + I + IL ++E PRD G ST+ AM LSR L Sbjct: 7 MSDFESKISSAVREAVKQVYDIDADDSIL---IVETPRDPKMGDYSTSVAMRLSRTLHKS 63 Query: 61 PLTIAELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 PL IA IV ++K I + S+ GFIN L L +++++++ +G +YG+N G Sbjct: 64 PLDIAGPIVEKLKEIYTEASSIEAVKPGFINFRLKKDALAEVINTVINAGDDYGKNNTGA 123 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G V +E+VSANPTG +H GH R A GD ++ L SGY RE+Y+NDAG QI L Sbjct: 124 GVNVLVEWVSANPTGDLHCGHARNAAWGDCISRLYEASGYNNYREFYVNDAGNQIVMLGE 183 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ RY + LPE Y + + ++A+K + LN + L K V+ Sbjct: 184 SLISRYFDH-FGKKYPLPEDGYHAQDIIDIANQIAEKDGDKWLNADSAERLEYFKKTGVE 242 Query: 240 AMMKIIRDDLKAL-----NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294 +K I DDLK N QH+ F E++ R I D + +A G YE Sbjct: 243 LELKKIEDDLKIYRCDFQNFQHETFFYENNRKR-----INDCLTKMADMGLTYEK----- 292 Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354 L F+ST GDD DR L KSDG+ +Y D+A K ERG+D++I Sbjct: 293 -----------DGALWFKSTEYGDDKDRVLRKSDGTLSYLTPDIANHIYKIERGYDHLIN 341 Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414 + G+DH YV R+++ A+ + V + ++VR+ DG +KMSKR G+ IT+R + Sbjct: 342 LWGADHHSYVTRMQSALTALGYPDV-LKVDIIQMVRMVEDGKEVKMSKRTGNAITIRELC 400 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 ++VG D+ R+ + + + +DFD + + NPVFY QYAY+R SI K Sbjct: 401 EDVGVDAARWFFVSKDVATHMDFDMKLARSKDNNNPVFYAQYAYSRMHSIMNNPK----- 455 Query: 475 LDFDLFPRNVIPQESEFDT-------SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 IP ++ DT ELQL+ ++E+P + NA +++P K+ Y+ Sbjct: 456 ----------IPAFTQVDTYDRLSDEKELQLMKLISEFPIEVANAAASRKPNKITEYIIS 505 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L ++H +++ R N + +LT RL LV A + + LN++GVE+P M Sbjct: 506 LVKIYHSYYNSSRVN------NPEDPELTNQRLGLVKATMITLKNALNLVGVEAPESM 557 >gi|303238405|ref|ZP_07324940.1| arginyl-tRNA synthetase [Acetivibrio cellulolyticus CD2] gi|302594109|gb|EFL63822.1| arginyl-tRNA synthetase [Acetivibrio cellulolyticus CD2] Length = 565 Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 189/587 (32%), Positives = 325/587 (55%), Gaps = 33/587 (5%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L + S +KN L ++ + + IVIE PR+ HG STN AM ++ P Sbjct: 8 LKSQISEVVKNSLSRAVASGELPEFEVGEIVIETPREKEHGDFSTNIAMQAAKAAKKAPR 67 Query: 63 TIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 IA++I+ ++ + V+ V AG GFIN YL+ +L L +I +YG +GKG+ Sbjct: 68 QIADIIIKNMEFEGTYVEKVETAGPGFINFYLNNLWLYDTLKTIQTMKDKYGEINVGKGS 127 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 KV +EFVSANPTGP+H+G+ R +GD +AS+++ +GY+VTRE+Y+NDAG QI +S+ Sbjct: 128 KVMVEFVSANPTGPLHMGNARGGALGDCIASVLSKAGYDVTREFYVNDAGNQIEKFGISL 187 Query: 182 FWRYQQALYNNDS-DLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 RY Q L D+ + PE GY+ ++H+ +A +LL+ E+ + ++++ Sbjct: 188 EARYIQQLKGEDAVEFPEDGYHGEDIIEHMKDYIAIN-GDKLLSVDSEQRRKELVEFALP 246 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 ++ IR +++ ++ D++ SE + D ++D ++ L G+ YE Sbjct: 247 RNIERIRSGMESYGVKFDVWFSEQSLY--DSGELKDTLELLKNNGHTYE----------- 293 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGS 358 + F+++ +G + D +++++G TYFA+D+AY K K+ +R +D +I ++G+ Sbjct: 294 -----KDGAIWFKTSELGTEKDEVIVRNNGLPTYFASDIAYHKNKFLKRNYDRVINLLGA 348 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH G+V R++A A+ +++V+L +LVRLYR+G +MSKR G I+L +++EVG Sbjct: 349 DHHGHVARMKAAVKAIDVDPDKLDVVLFQLVRLYRNGEIARMSKRTGKSISLTDLLEEVG 408 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ RF+ + + +DFD +QS ENPV+YVQYA+AR S+ ++ D + Sbjct: 409 RDAARFIFNTKASGSHIDFDLDLAVKQSNENPVYYVQYAHARICSMIKR----LEDENVK 464 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L + + E++L+ LAEYP I A EP +L Y+ D+A +FH ++ Sbjct: 465 LQSVDSVDLTKLVAKEEIELMKKLAEYPEEIRIAAETLEPSRLTRYVLDVAGLFHSFYN- 523 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A L R+ LV + +I + L+++ + +P +M Sbjct: 524 -----ACKVKDAEGDSLRNARVVLVDSTRVVIKNVLDLLSISAPEKM 565 >gi|257455955|ref|ZP_05621172.1| arginyl-tRNA synthetase [Enhydrobacter aerosaccus SK60] gi|257446701|gb|EEV21727.1| arginyl-tRNA synthetase [Enhydrobacter aerosaccus SK60] Length = 605 Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 198/602 (32%), Positives = 307/602 (50%), Gaps = 71/602 (11%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 +D I R +D AHG ++N AMI ++ +P +A+ IVA + + V IAG GF Sbjct: 30 VDNSTISRTKDQAHGDFASNLAMIAAKTAKKNPRELAQTIVAMLPASDMISKVEIAGPGF 89 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 IN +L + IL +I+ ++G + G K+ +EFVSANPT +HVGH R A G Sbjct: 90 INFFLDDNARFAILDTIMQQKGDFGTSEEFAGKKIQVEFVSANPTSSLHVGHGRGAAFGM 149 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 ++A+L+ GY+V REYY+NDAG Q++ LA S + RY + L P Y G Y+K Sbjct: 150 SVANLLEAVGYQVGREYYVNDAGRQMDILATSTYLRYLE-LCGEPIVFPTNAYQGDYVKD 208 Query: 209 V--------GKELADKYSSELLNFPEEKW------------------------------- 229 + G L + LLN P + Sbjct: 209 IAKPIKKQHGDSLKTAWEHMLLNVPADAEYQIDANGEKVCVSGDKEAHIDGLIANAKANL 268 Query: 230 ---LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286 I + ++ ++ I+DDL N+ D + SE I ++ L ++G++ Sbjct: 269 GDNYQIFHEAALSTILADIQDDLADFNVHFDQWFSEKSIQ----DAIVPALELLEQRGFL 324 Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346 Y+ L F+ST GD+ DR + +++G +TYFA+D+AY K K + Sbjct: 325 YQ----------------KDGNLWFKSTEFGDEKDRVVRRANGQFTYFASDIAYHKDKLD 368 Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406 RG+D +I V GSDH GY+KR++A A+ +++V+L + V L+R I+MS R+G Sbjct: 369 RGYDKIIDVWGSDHHGYIKRVKAALTAMGYDAQRMDVILVQFVTLWRGTEQIQMSSRSGQ 428 Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIF 465 F+TLR + EVG+D+ RF + RK + +DFD K +K+N V+Y+QYA+AR CR + Sbjct: 429 FVTLRELRQEVGNDAARFYYVARKPEQHIDFDLELAKSHTKDNAVYYIQYAHARICRVLE 488 Query: 466 R-QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R + + I D ++ + Q E D L+ LA YP V+ A + EP+ L Y Sbjct: 489 RTEERGIKVDDKAGKAHQHRLTQPVETD-----LLSLLASYPEVLRRAAVNYEPHLLTNY 543 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNR-KLTMMRLQLVHAVASIINSGLNIIGVESPN 583 L DLAS+FHG ++ R P+ + L RL+L +V +I +GL ++G+ +P Sbjct: 544 LKDLASLFHGWYNDNRILPKDGETPTQDELDLMQARLRLSKSVRQVIQNGLILLGLTAPT 603 Query: 584 EM 585 M Sbjct: 604 SM 605 >gi|148377750|ref|YP_001256626.1| arginyl-tRNA synthetase [Mycoplasma agalactiae PG2] gi|148291796|emb|CAL59186.1| Arginyl tRNA synthetase [Mycoplasma agalactiae PG2] Length = 539 Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 205/586 (34%), Positives = 313/586 (53%), Gaps = 57/586 (9%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D +L++ LKEI + + + + + E + HG L+TN A+ L +P+ +A Sbjct: 5 DLKEKLESKLKEIASSLGITRSVF---LTESKK---HGDLTTNMAL---GNLNTNPMELA 55 Query: 66 ELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR-NLIGKGTKV 123 IV+ I ++ + ++ +A GFIN + YL ++ I+ YG+ N +GK V Sbjct: 56 NQIVSMINLEEFGIKNISVANPGFINFSIGDDYLVSCVNQILKLDKNYGKGNKVGK---V 112 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EF+SANPTG +HVGH R A VG T+A+++ F+GY V REYYINDAG QIN LA S++ Sbjct: 113 NVEFISANPTGFLHVGHARNAAVGSTIANILEFAGYSVVREYYINDAGNQINVLANSLWS 172 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP-EEKWLPIVKDYSVQAMM 242 RY+Q Y +D +PE Y G + ++ KY + N+ + + L +VK+ ++ M Sbjct: 173 RYKQIFY-SDYSMPEESYKGEDIVWGAQKFYAKYGDKFKNYELDNELLELVKNEAISIFM 231 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 I++DL + D + SE + D I++ I NL + Y +G Sbjct: 232 TKIQEDLANFGVWFDNYFSEKSLYENDEVKIKETIKNL-KNAYENDG------------- 277 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFD-NMIYVMGSDH 360 L ++T+ GDD DR L+KSDGSYTYF D+ Y + KY+R G D +I V G+DH Sbjct: 278 -----ALWLKTTIHGDDKDRVLVKSDGSYTYFLPDIVYHQDKYKRMGADATIINVWGADH 332 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 SGYVKR++ + + + VL +LVRL ++G KMSKR G L V VG D Sbjct: 333 SGYVKRMQCAVKDLGLNEQNLVVLCMQLVRLVKNGEEFKMSKRKGTSFFLNEFVKMVGKD 392 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 S RF++L R + LDFD QS +NP VQYA ARC S+ ++A ++ Sbjct: 393 SARFLLLDRTLNSKLDFDIDLATSQSNDNPAILVQYANARCHSLIKKA---------NID 443 Query: 481 PRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 N+ + FD S+ LI L E+P V+E + + L YL LA F+ +++ Sbjct: 444 SNNLYA--TSFDKQSDNSLITTLLEFPSVVEKSADKYATHLLTQYLVKLAKEFNSWYTNS 501 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P+L + + N + ++ LV AV+ I +GL ++ V +P M Sbjct: 502 ---PKL--IGSENE---ISKIALVKAVSITIENGLKLLEVSAPVSM 539 >gi|312126952|ref|YP_003991826.1| arginyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108] gi|311776971|gb|ADQ06457.1| arginyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108] Length = 561 Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 199/558 (35%), Positives = 312/558 (55%), Gaps = 36/558 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90 I+IE+P++ +HG +TN AM L+R L +P IA IV I + ++ V +AG GFIN Sbjct: 36 IMIEKPKEKSHGDFATNIAMELTRKLKKNPREIANGIVNAIDLSNTFIEKVEVAGPGFIN 95 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + +L K++ I+ G +YG+ IG G KV +EFVSANPTGPMH+G+ R +GD L Sbjct: 96 FFFKKDWLYKVVDVILSEGDDYGKVNIGNGKKVMVEFVSANPTGPMHMGNARGGALGDCL 155 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+L+ ++GY VT+E+Y+NDAG QI S+ RY+Q L + LPE Y G + Sbjct: 156 ANLLKWAGYNVTKEFYVNDAGNQIEKFGQSLEIRYRQ-LKGENIVLPEDCYHGEDIIERV 214 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 KE D++ +L N ++ + D++++ + ++++ L+ I++D++ E + + Sbjct: 215 KEYLDEHGDDLENLSSDERRKKLVDFALKRNILLMKEHLRKYGIEYDVWFHESSLY--ES 272 Query: 271 SPIRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 + + I++L +GY YE G L SK + D L++++ Sbjct: 273 GEVFETIEDLKSRGYTYEKDGALWFAASKIDKSLK-----------------DEVLIRAN 315 Query: 329 GSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387 G TYFAAD+AY + K+E RGFD +I + G+DH G+V R++A A+ ++ V+L + Sbjct: 316 GIPTYFAADIAYHRNKFEKRGFDIVIDIWGADHHGHVARMKAAMKALGIDPEKLIVILMQ 375 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 LVRL R ++MSKR G ITL ++DE+G D+ RFM + ++ D V +Q+ Sbjct: 376 LVRLVRGKEVVRMSKRTGKAITLIDLIDEIGKDAARFMFNTKSADTHIEIDLDLVTQQTL 435 Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 +NPVFYVQYA+AR I R + LD ++ I E EL+L+ L E P Sbjct: 436 DNPVFYVQYAHARTCGIIRALSEEGIVLD-----KSKIKVELLQQEEELELLKKLLELPE 490 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 IE A + ++ YL DLAS+FH ++ R V+ N +L RL LV V Sbjct: 491 EIEMAARNLDVSRVTKYLLDLASMFHAFYNACR-------VKNENEELMFTRLSLVECVR 543 Query: 568 SIINSGLNIIGVESPNEM 585 +IN+ L ++GV++P +M Sbjct: 544 IVINNMLRLLGVDAPEKM 561 >gi|255320625|ref|ZP_05361802.1| arginyl-tRNA synthetase [Acinetobacter radioresistens SK82] gi|255302241|gb|EET81481.1| arginyl-tRNA synthetase [Acinetobacter radioresistens SK82] Length = 596 Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 191/598 (31%), Positives = 314/598 (52%), Gaps = 79/598 (13%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 + R +D +HG ++N AMI ++ G+ P +AE I+A + D+ IAG GFIN +L Sbjct: 32 LTRTKDRSHGDFASNIAMIGAKAAGMKPRDLAEKILANLPEVADISKAEIAGPGFINFFL 91 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + +L I +YGR + K+ +EFVSANPT +HVGH R A G T+A+L Sbjct: 92 NADQRFAVLDQIQAQKDQYGRTQVNAAKKIQVEFVSANPTSSLHVGHGRGAAYGMTVATL 151 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + +G +V REYY+NDAG Q++ LA S + RY + L D P+ Y G Y+K + + + Sbjct: 152 LEATGAKVDREYYVNDAGRQMDILATSTYLRYLE-LLGQDLVFPKNAYQGDYVKEIAQGI 210 Query: 214 AD---------------------KYSSE--------LLNFPEEKWLP------------- 231 D +Y++E +L+ +EK + Sbjct: 211 IDLKGEAYVHPVADVYKDVPEDVQYAAEPDSEGNKVVLSGDKEKHIDGLIFNAQHLLGEG 270 Query: 232 --IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 + +++A++ I+DDL + + + SE I + + L ++G++YE Sbjct: 271 YRVFHQAALKAILDDIKDDLGEFGVTFNEWFSEASL----TEKIDEALQTLDQRGFLYE- 325 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349 + F+ST GD+ DR + + +G TYFA+D+AY K +RG+ Sbjct: 326 ---------------KDGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGY 370 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 ++I + GSDH GY+ R++A A+ ++ VLL + V L+R G ++MS R+G F+T Sbjct: 371 TDLIDIWGSDHHGYISRVKAAIEAMGYDSKKLTVLLVQFVSLWRSGEMVQMSSRSGQFVT 430 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQA 468 LR + EVG+D+ RF + RK+ + +DFD QSK+N V+Y+QYA+AR CR + + A Sbjct: 431 LRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARICRMLEKAA 490 Query: 469 KD-IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 + I ++ R+ P+ E D +E +L+ LA YP ++ A EP+++ YL + Sbjct: 491 SNGIVLNVS---TARSHAPR-LELD-AETELLAKLAAYPDIVIRAANVYEPHQVGNYLKE 545 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA++FHG ++ + V N+ +LT RL L V ++ +GL ++GV +P M Sbjct: 546 LAALFHGWYNEHK-------VLGNDAELTQARLLLSVNVQQVLRNGLELLGVSAPTTM 596 >gi|172040372|ref|YP_001800086.1| arginyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109] gi|171851676|emb|CAQ04652.1| unnamed protein product [Corynebacterium urealyticum DSM 7109] Length = 569 Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 196/588 (33%), Positives = 305/588 (51%), Gaps = 44/588 (7%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 A+ S + +E+ + ++ ++ D +ERPR+ HG +TN AM ++ G +P Sbjct: 19 AELSEFIARIAREVLTERGLDASVVPDNPTVERPRNPEHGDYATNVAMQTAKKAGTNPRE 78 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 + + ++ P++D +AG GFIN+ L+ + KI+ +I+ +G ++GR KGTK+ Sbjct: 79 LGTWLAEKLAASPEIDEASVAGPGFINIRLAAAAQGKIVENILAAGQDFGRGDAYKGTKI 138 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L L+A G EVTREYY ND G QI+ A S+ Sbjct: 139 NLEFVSANPTGPIHLGGTRWAAVGDSLGRLLAAQGGEVTREYYFNDHGGQIDRFAKSLL- 197 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKEL--ADKYSSELLNFPEEKWLPIVKDYSVQAM 241 A N+ PE Y G Y++ + ++ A+ EL + ++ + + V+ M Sbjct: 198 ----AAARNEP-TPEDGYGGQYIQDIAAQVVEANPTWGELSDADAQE---LFRAQGVELM 249 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 I+ LK + D+F E+ + + I+ L G +YE Sbjct: 250 FDHIKTTLKQFGTEFDVFFHENSLF--ESGAVDKAIEELKSNGNLYEA------------ 295 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 RS+ GDD DR ++KSDG+ Y A D+AY K RG D IY++G+DH Sbjct: 296 ----DGAWWLRSSDFGDDKDRVVIKSDGNAAYIAGDIAYIADKINRGHDLCIYMLGADHH 351 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 GY+ RL+A AAA+ Q+ V++ ++V L RDG ++MSKRAG ITL +V+ +G D+ Sbjct: 352 GYIARLQAAAAALGYDPQQVEVMIGQMVNLVRDGEAVRMSKRAGTIITLDDLVEAIGVDA 411 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFD 478 R+ ++ LD D QS ENPVFYVQYA+AR S+ R+A + F D Sbjct: 412 ARYALIRSSVDSSLDIDMDLWASQSNENPVFYVQYAHARLCSLQRKADEQGVDFAGADLS 471 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L + E LI L E+P+V+ A +EP+++A Y LA FH + Sbjct: 472 LLTHD----------REGTLIRSLGEFPKVVRTAAELREPHRIAHYAEKLAGDFHRFYDA 521 Query: 539 GRENPRL-RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P+ + + RL L A ++ + L+++GV +P M Sbjct: 522 CQVLPKADEPTGTDAAPVFHARLALAAATRQVLENALSLVGVSAPERM 569 >gi|332875617|ref|ZP_08443429.1| arginine--tRNA ligase [Acinetobacter baumannii 6014059] gi|332736190|gb|EGJ67205.1| arginine--tRNA ligase [Acinetobacter baumannii 6014059] Length = 596 Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 191/597 (31%), Positives = 311/597 (52%), Gaps = 77/597 (12%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 + R +D +HG ++N AMI S+ G+ P +AE I+A + D++ IAG GFIN +L Sbjct: 32 LTRTKDRSHGDFASNIAMIGSKAAGMKPRDLAEKILAVLPEVADINKAEIAGPGFINFFL 91 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + IL I +GR+ K+ +EFVSANPT +HVGH R A G T+A+L Sbjct: 92 NADQRFAILDQIQAQKESFGRSQSNAAKKIQVEFVSANPTSSLHVGHGRGAAYGMTVANL 151 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + +G +V REYY+NDAG Q++ LA S + RY + L N P+ Y G Y+K + + + Sbjct: 152 LEATGAKVDREYYVNDAGRQMDILATSTYLRYLELLGQNLV-FPKNAYQGDYVKEIAQGI 210 Query: 214 ADK---------------------YSSEL--------LNFPEEKWLP------------- 231 DK Y+ EL L+ +EK + Sbjct: 211 IDKDGDAYVREVANVYKDVPEDVQYAEELDSEGNKVVLSGDKEKHIDGLIANSQQLLGEG 270 Query: 232 --IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 + ++ A++ I+DDL + + + SE + I + ++ L ++G++YE Sbjct: 271 YRVFHQAALHAILDDIKDDLADFGVTFNQWFSEASL----SAKIDEALETLDQRGFLYE- 325 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349 + F+ST GD+ DR + + +G TYFA+D+AY K +RG+ Sbjct: 326 ---------------KDGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGY 370 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 +++ + GSDH GY+ R++A A+ ++ VLL + V L+R G ++MS R+G F+T Sbjct: 371 TDLVDIWGSDHHGYISRVKAAIDAMGYDSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVT 430 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQA 468 LR + EVG+D+ RF + RK+ + +DFD QSK+N V+Y+QYA+AR CR + + A Sbjct: 431 LRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARICRMLEKAA 490 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 L F++ D +E +++ LA YP V+ A A EP+++ YL +L Sbjct: 491 S---TGLQFEVSAARSHAARLSLD-AETEILAKLAAYPDVVLRAANAYEPHQVGNYLKEL 546 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A++FHG ++ + V +++ +LT RL L V ++ +GL ++GV +P M Sbjct: 547 AALFHGWYNEHK-------VLSDDAELTQARLLLSINVQQVLRNGLELLGVSAPEAM 596 >gi|169797659|ref|YP_001715452.1| arginyl-tRNA synthetase [Acinetobacter baumannii AYE] gi|184156483|ref|YP_001844822.1| arginyl-tRNA synthetase [Acinetobacter baumannii ACICU] gi|213155547|ref|YP_002317592.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB0057] gi|215485013|ref|YP_002327254.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB307-0294] gi|239503058|ref|ZP_04662368.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB900] gi|260557602|ref|ZP_05829816.1| arginyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606] gi|301347274|ref|ZP_07228015.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB056] gi|301510644|ref|ZP_07235881.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB058] gi|301597695|ref|ZP_07242703.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB059] gi|332852639|ref|ZP_08434293.1| arginine--tRNA ligase [Acinetobacter baumannii 6013150] gi|332869354|ref|ZP_08438732.1| arginine--tRNA ligase [Acinetobacter baumannii 6013113] gi|226701370|sp|B7H2A9|SYR_ACIB3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|226701511|sp|B7I1U9|SYR_ACIB5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|229558748|sp|B2I0Y7|SYR_ACIBC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|229558750|sp|B0VBN5|SYR_ACIBY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|169150586|emb|CAM88495.1| arginyl-tRNA synthetase [Acinetobacter baumannii AYE] gi|183208077|gb|ACC55475.1| Arginyl-tRNA synthetase [Acinetobacter baumannii ACICU] gi|213054707|gb|ACJ39609.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB0057] gi|213987391|gb|ACJ57690.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB307-0294] gi|260408775|gb|EEX02079.1| arginyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606] gi|322506351|gb|ADX01805.1| argS [Acinetobacter baumannii 1656-2] gi|332729107|gb|EGJ60454.1| arginine--tRNA ligase [Acinetobacter baumannii 6013150] gi|332732772|gb|EGJ63988.1| arginine--tRNA ligase [Acinetobacter baumannii 6013113] Length = 596 Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 191/597 (31%), Positives = 310/597 (51%), Gaps = 77/597 (12%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 + R +D +HG ++N AMI S+ G+ P +AE I+A + D+ IAG GFIN +L Sbjct: 32 LTRTKDRSHGDFASNIAMIGSKAAGMKPRDLAEKILAALPEVADISKAEIAGPGFINFFL 91 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + IL I +GR+ K+ +EFVSANPT +HVGH R A G T+A+L Sbjct: 92 NADQRFAILDQIQAQKESFGRSQSNAAKKIQVEFVSANPTSSLHVGHGRGAAYGMTVANL 151 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + +G +V REYY+NDAG Q++ LA S + RY + L N P+ Y G Y+K + + + Sbjct: 152 LEATGAKVDREYYVNDAGRQMDILATSTYLRYLELLGQNLV-FPKNAYQGDYVKEIAQGI 210 Query: 214 ADK---------------------YSSEL--------LNFPEEKWLP------------- 231 DK Y+ EL L+ +EK + Sbjct: 211 IDKDGDAYVREVANVYKDVPEDVQYAEELDSEGNKVVLSGDKEKHIDGLIANSQQLLGEG 270 Query: 232 --IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 + ++ A++ I+DDL + + + SE + I + ++ L ++G++YE Sbjct: 271 YRVFHQAALHAILDDIKDDLADFGVTFNQWFSEASL----SAKIDEALETLDQRGFLYE- 325 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349 + F+ST GD+ DR + + +G TYFA+D+AY K +RG+ Sbjct: 326 ---------------KDGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGY 370 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 +++ + GSDH GY+ R++A A+ ++ VLL + V L+R G ++MS R+G F+T Sbjct: 371 TDLVDIWGSDHHGYISRVKAAIDAMGYDSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVT 430 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQA 468 LR + EVG+D+ RF + RK+ + +DFD QSK+N V+Y+QYA+AR CR + + A Sbjct: 431 LRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARICRMLEKAA 490 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 L F++ D +E +++ LA YP V+ A A EP+++ YL +L Sbjct: 491 S---TGLQFEVSAARSHAARLSLD-AETEILAKLAAYPDVVLRAANAYEPHQVGNYLKEL 546 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A++FHG ++ + V +++ +LT RL L V ++ +GL ++GV +P M Sbjct: 547 AALFHGWYNEHK-------VLSDDAELTQARLLLSINVQQVLRNGLELLGVSAPEAM 596 >gi|83816551|ref|YP_445118.1| arginyl-tRNA synthetase [Salinibacter ruber DSM 13855] gi|109895033|sp|Q2S3W3|SYR_SALRD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|83757945|gb|ABC46058.1| arginyl-tRNA synthetase [Salinibacter ruber DSM 13855] Length = 562 Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 193/575 (33%), Positives = 306/575 (53%), Gaps = 58/575 (10%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK--IDPD-VDSVFIAGKGF 88 I +E P HG L+TN A+ L+ LG +P +IAE + R++ +DP + SV +AG GF Sbjct: 25 IELEAPDRPEHGDLATNTALRLASVLGDNPRSIAETLAERLRERVDPARIKSVEVAGPGF 84 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 +N + YL L+ ++ G +G+ G G + +E+VSANPTGP++VGH R AV+GD Sbjct: 85 VNFRFAQDYLFDGLADLLAQGDTFGQTDAGAGERALVEYVSANPTGPLNVGHGRNAVLGD 144 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---------------- 192 T+A+L+A++GY+VTREYY NDAG Q+ LA SV RY +AL N Sbjct: 145 TIANLLAWTGYDVTREYYYNDAGRQMRVLAQSVRARY-EALAGNVPTTTLTLDDDTTVEV 203 Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252 PE Y G Y+ + + L D++ L + L + + A+ I L+AL Sbjct: 204 PETFPEDGYLGQYIVEIAQALYDEHGDALCATDD---LAPFRAAAETAIFGDIEATLRAL 260 Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312 NI D + +E H D + ++D LA GY YE + L F+ Sbjct: 261 NIDMDGYANEQALH--DEGRVDAVLDGLADAGYTYE----------------EDGALWFK 302 Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372 +T G + D L+K G TY D+AY K+ERGFD M+ V G+DH + + Sbjct: 303 TTEFGTEDDTVLVKQTGEPTYRTPDIAYHTAKFERGFDLMVDVFGADHHAAYPDVLSALD 362 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 + +++V+L + V L R P+KMS R +++TL ++++VG+D RF L R Sbjct: 363 VLGYDTDRVDVILYQFVTLVRGDEPVKMSTRRANYVTLDDLIEQVGADVTRFFFLMRSPD 422 Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI--FPDLDFDLFPRNVIPQESE 490 L+FD +E+S++NPVFY+QYA+AR S+ +A+++ D D DL ++ E Sbjct: 423 THLNFDLELAEEESEKNPVFYLQYAHARICSVLDKAEEVGFSHDEDADL---ALLTHE-- 477 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550 E+ LI L +PR ++NA A+ P+ + YL D+A+ F + + R + Sbjct: 478 ---DEIALIKELLRFPRELQNAADARAPHFVPNYLRDVATAFSQFYDNCR-------IIG 527 Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++L R++L A +++ +GL ++G+ +P +M Sbjct: 528 EEQELASARMRLALAAKTVLKNGLTVLGISAPRQM 562 >gi|260551329|ref|ZP_05825530.1| arginyl-tRNA synthetase [Acinetobacter sp. RUH2624] gi|260405643|gb|EEW99134.1| arginyl-tRNA synthetase [Acinetobacter sp. RUH2624] Length = 596 Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 191/597 (31%), Positives = 309/597 (51%), Gaps = 77/597 (12%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 + R +D +HG ++N AMI S+ G+ P +AE I+A + D+ IAG GFIN +L Sbjct: 32 LTRTKDRSHGDFASNIAMIGSKAAGMKPRDLAEKILAALPEVADISKAEIAGPGFINFFL 91 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + IL I +GR+ K+ +EFVSANPT +HVGH R A G T+A+L Sbjct: 92 NADQRFAILDQIQAQKESFGRSQSNAAKKIQVEFVSANPTSSLHVGHGRGAAYGMTVANL 151 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + +G +V REYY+NDAG Q++ LA S + RY + L N P+ Y G Y+K + + + Sbjct: 152 LEATGAKVDREYYVNDAGRQMDILATSTYLRYLELLGQNLV-FPKNAYQGDYVKEIAQSI 210 Query: 214 ADK---------------------YSSEL--------LNFPEEKWLP------------- 231 DK Y+ EL L+ +EK + Sbjct: 211 IDKDNNAYVRDVADVYKDVPEDVQYAEELDSEGNKVVLSGDKEKHIDGLIANSQQLLGEG 270 Query: 232 --IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 + ++ A++ I+DDL + + + SE + I + ++ L ++G++YE Sbjct: 271 YRVFHQAALHAILDDIKDDLADFGVTFNQWFSEASL----SAKIDEALETLDQRGFLYE- 325 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349 + F+ST GD+ DR + + +G TYFA+D+AY K +RG+ Sbjct: 326 ---------------KDGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGY 370 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 +++ + GSDH GY+ R++A A+ ++ VLL + V L+R G ++MS R+G F+T Sbjct: 371 TDLVDIWGSDHHGYISRVKAAIDAMGYDSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVT 430 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQA 468 LR + EVG+D+ RF + RK+ + +DFD QSK+N V+Y+QYA+AR CR + Sbjct: 431 LRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARICRML---E 487 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 K L F++ D +E +++ LA YP V+ A A EP+++ YL +L Sbjct: 488 KATSTGLQFEVSAARSHAARLSLD-AETEILAKLAAYPDVVLRAANAYEPHQVGNYLKEL 546 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A++FHG ++ + V +++ +LT RL L V ++ +GL ++GV +P M Sbjct: 547 AALFHGWYNEHK-------VLSDDAELTQARLLLSINVQQVLRNGLELLGVSAPEAM 596 >gi|4894688|gb|AAD32590.1|AF126720_1 arginyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155] Length = 550 Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 189/554 (34%), Positives = 288/554 (51%), Gaps = 35/554 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + +ERPR+ HG +TN A+ L + +G++P +A + + + +AG GF+NL Sbjct: 32 VTVERPRNPEHGDYATNLALQLGKKVGVNPRELAGWLATALTAADGIAVAEVAGPGFVNL 91 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + S I+++++ + YG + G VN+EFVSANPTGP+H+G R A VGDTL Sbjct: 92 RIEASAQGVIITNVLAAEGSYGSSDQYAGRNVNLEFVSANPTGPIHIGGTRWAAVGDTLG 151 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 L+A G VTREYY ND GAQI+ S+ + PE Y G Y+ + + Sbjct: 152 RLLATQGAAVTREYYFNDHGAQIDRFVNSLIASAKG------EPTPEDGYAGDYIVDIAQ 205 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 ++ K + ++L PE++ + V M I+ L D++ D H Sbjct: 206 QVIAK-APDVLGLPEDQQRETFRAIGVNLMFTHIKQSLHDFGTDFDVYTHGDWMHT--SG 262 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + I L G +YE + R+T GDD DR ++KSDG+ Sbjct: 263 RVDQAITQLREAGSIYE----------------KDGAVWLRTTDFGDDKDRVVIKSDGNA 306 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 Y A DLAY+ K +RGFD IY++G+DH GY+ RL+A AAA+ + + VL+ ++V L Sbjct: 307 AYIAGDLAYYLDKRKRGFDLCIYMVGADHHGYIARLKAAAAALGDDPDTVEVLIGQMVNL 366 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 RDG P++MSKRAG ITL +V+ +G D+ R+ ++ +D D S ENPV Sbjct: 367 VRDGQPVRMSKRAGTVITLDDLVEAIGVDAARYALIRSSVDTPIDIDLELWSSASNENPV 426 Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511 +YVQYA+AR ++ R A D+ ++ D +++ E E LI +L E+PRV++ Sbjct: 427 YYVQYAHARLCALARNAADLGVSVNTDHL--DLLTHEKEG-----ALIRNLGEFPRVLKT 479 Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571 A +EP+++ YL DLA +H + R P+ L RL L A +I Sbjct: 480 AASLREPHRVCRYLEDLAGDYHRFYDSCRVLPQ---GDEEPGDLHSARLALCRATRQVIA 536 Query: 572 SGLNIIGVESPNEM 585 +GL I+GV +P M Sbjct: 537 NGLAILGVSAPERM 550 >gi|312792767|ref|YP_004025690.1| arginyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312179907|gb|ADQ40077.1| arginyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 561 Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 193/557 (34%), Positives = 316/557 (56%), Gaps = 34/557 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90 I+IE+P++ +HG +TN AM L+R L +P IA+ I++ + + ++ V +AG GFIN Sbjct: 36 IMIEKPKEKSHGDFATNIAMELTRKLKKNPREIAQSILSSVDLSNTFIEKVEVAGPGFIN 95 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + +L K++ I+ G +YG+ IG KV +EFVSANPTGPMH+G+ R +GD L Sbjct: 96 FFFKKDWLYKVVDVILSEGDDYGKVNIGNSKKVMVEFVSANPTGPMHMGNARGGALGDCL 155 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+L+ ++GY VT+E+Y+NDAG QI S+ RY+Q L + +LPE Y G + Sbjct: 156 ANLLKWAGYNVTKEFYVNDAGNQIEKFGQSLEIRYRQ-LKGENIELPEDCYHGEDIIERV 214 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 KE D++ +L N ++ + D++++ + ++++ L+ I++D++ E + + Sbjct: 215 KEYLDEHGDDLENLSSDERREKLVDFALKRNISLMKEHLRKYGIEYDVWFHESSLY--ES 272 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV-DRPLLKSDG 329 + + I++L +GY YE L F ++ + +++ D L++++G Sbjct: 273 GEVFETIEDLKSRGYTYE----------------KDGALWFAASKIDENLKDEVLIRANG 316 Query: 330 SYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 TYFAAD+AY + K+E RGFD +I + G+DH G+V R++A A+ ++ V+L +L Sbjct: 317 IPTYFAADIAYHRNKFEKRGFDIVIDIWGADHHGHVARMKAAMKALGIDPERLIVILMQL 376 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 VRL R ++MSKR G ITL ++DE+G D+ RFM + ++ D V +Q+ + Sbjct: 377 VRLVRGKEIVRMSKRTGKAITLIDLIDEIGKDAARFMFNTKSADTHIEIDLDLVSQQTLD 436 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 NPVFYVQYA+AR I R + LD ++ I E EL+L+ L E P Sbjct: 437 NPVFYVQYAHARTCGILRALSEEGIVLD-----KSRIKVELLQQEEELELLKKLLELPEE 491 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 IE A + ++ YL DLAS+FH ++ R V+ N +L RL LV V Sbjct: 492 IEIAAKNLDVSRVTKYLLDLASMFHAFYNACR-------VKNENEELMFTRLSLVECVRI 544 Query: 569 IINSGLNIIGVESPNEM 585 +I + L ++GV++P +M Sbjct: 545 VIKNMLRLLGVDAPEKM 561 >gi|317057061|ref|YP_004105528.1| arginyl-tRNA synthetase [Ruminococcus albus 7] gi|315449330|gb|ADU22894.1| arginyl-tRNA synthetase [Ruminococcus albus 7] Length = 586 Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 190/577 (32%), Positives = 293/577 (50%), Gaps = 54/577 (9%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSVFIAGKGFINLY 92 IE P D +G +STNAAM+ ++P P IAE IV +I D V IAG GFIN Y Sbjct: 39 IEIPADPKNGDVSTNAAMVCAKPFRSAPRKIAEAIVGKIDTTGSCFDKVEIAGPGFINFY 98 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 + ++ +++ G EYG+ GKG + +EFVSANPTGPMH+G+ R +GD LA+ Sbjct: 99 YGKGWFGSVVKAVLDEGKEYGKTDFGKGKRALVEFVSANPTGPMHIGNARGGAIGDCLAA 158 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ---------ALYNNDSD-------- 195 +M ++GY+V RE+YINDAG QI S+ RY Q N D D Sbjct: 159 VMEYAGYDVEREFYINDAGNQIEKFGKSLRLRYMQICGDKGQEIVAKNLDMDTFCKTIYE 218 Query: 196 ------LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249 +P+ Y G+ + K D+Y PEE+ + DY++ + + DL Sbjct: 219 DTETFPMPDDVYLGMDIIAHAKNFFDEYGMIASAQPEEECKKALVDYALPKNIDGLHKDL 278 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 I +D + E H + ++++ID L GY YE L Sbjct: 279 AKYRINYDTWFRESTLH--NDGSVQEVIDKLKAGGYTYE----------------KDGAL 320 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLE 368 FR+T GD+ DR L++ +G TYF D+AY K R FD I + G+DH GY+ RL+ Sbjct: 321 WFRTTDFGDEKDRVLVRDNGIPTYFVPDIAYHYNKLAVRKFDKAIDIFGADHHGYIPRLK 380 Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428 A A+ + ++++++ ++VRL +DG K+SKR+G ITL +++E+ D+ RF Sbjct: 381 AAMTALGVDEKKLDIVIMQMVRLVKDGETYKLSKRSGKAITLNTLLEEIPIDAARFFFNL 440 Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488 R+ + DFD S +NPV+YVQYA+AR S+ ++ K + + + P E Sbjct: 441 REPNSQFDFDLDLAISNSSQNPVYYVQYAHARICSVIKKLK----EENIEAKPFTADMAE 496 Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548 + EL+L+ +A P I A A +P K+ Y D+A+++H ++ R + Sbjct: 497 ALSTPEELELVKLMATLPTTITEAAKAYDPAKVTKYAVDIATLYHKFYNACR-------I 549 Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + RL L AV II + L+++ ++ P M Sbjct: 550 KGEEENVMQARLALSLAVKQIIANILDMLKIDCPESM 586 >gi|262380742|ref|ZP_06073895.1| arginyl-tRNA synthetase [Acinetobacter radioresistens SH164] gi|262297690|gb|EEY85606.1| arginyl-tRNA synthetase [Acinetobacter radioresistens SH164] Length = 596 Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 190/598 (31%), Positives = 314/598 (52%), Gaps = 79/598 (13%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 + R +D +HG ++N AMI ++ G+ P +AE I+A + D+ IAG GFIN +L Sbjct: 32 LTRTKDRSHGDFASNIAMIGAKAAGMKPRDLAEKILANLPEVADISKAEIAGPGFINFFL 91 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + +L I +YGR + K+ +EFVSANPT +HVGH R A G T+A+L Sbjct: 92 NADQRFAVLDQIQAQKDQYGRTQVNAAKKIQVEFVSANPTSSLHVGHGRGAAYGMTVATL 151 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + +G +V REYY+NDAG Q++ LA S + RY + L D P+ Y G Y+K + + + Sbjct: 152 LEATGAKVDREYYVNDAGRQMDILATSTYLRYLE-LLGQDLVFPKNAYQGDYVKEIAQGI 210 Query: 214 AD---------------------KYSSE--------LLNFPEEKWLP------------- 231 D +Y++E +L+ +EK + Sbjct: 211 IDLKGKTYVHLVADVYKDVPEDVQYAAEPDSEGNKVVLSGDKEKHIDGLIFNAQHLLGEG 270 Query: 232 --IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 + +++A++ I+DDL + + + SE I + + L ++G++YE Sbjct: 271 YRVFHQAALKAILDDIKDDLGEFGVTFNEWFSEASL----TEKIDEALQTLGQRGFLYE- 325 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349 + F+ST GD+ DR + + +G TYFA+D+AY K +RG+ Sbjct: 326 ---------------KDGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGY 370 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 ++I + GSDH GY+ R++A A+ ++ VLL + V L+R G ++MS R+G F+T Sbjct: 371 TDLIDIWGSDHHGYISRVKAAIEAMGYDSKKLTVLLVQFVSLWRSGEMVQMSSRSGQFVT 430 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQA 468 LR + EVG+D+ RF + RK+ + +DFD QSK+N V+Y+QYA+AR CR + + A Sbjct: 431 LRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARICRMLEKAA 490 Query: 469 KD-IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 + I ++ R+ P+ E D +E +L+ LA YP ++ A EP+++ YL + Sbjct: 491 SNGIVLNVS---TARSHAPR-LELD-AETELLAKLAAYPDIVIRAANVYEPHQVGNYLKE 545 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA++FHG ++ + V ++ +LT RL L V ++ +GL ++GV +P M Sbjct: 546 LAALFHGWYNEHK-------VLGDDAELTQARLLLSVNVQQVLRNGLELLGVSAPTTM 596 >gi|159039563|ref|YP_001538816.1| arginyl-tRNA synthetase [Salinispora arenicola CNS-205] gi|157918398|gb|ABV99825.1| arginyl-tRNA synthetase [Salinispora arenicola CNS-205] Length = 554 Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 183/560 (32%), Positives = 298/560 (53%), Gaps = 39/560 (6%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 ++ +ERPR+ HG ++ A+ LS+ +G+ P +A + ++ + SV IAG GF+ Sbjct: 30 EQTAVERPRNAEHGDYASTLALQLSKKVGVPPRELAAALADQLGQTVGIKSVEIAGPGFL 89 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N+ L + ++ IV +G EYGR+ G +N+EFVSANPTGP+H+G R A VGD Sbjct: 90 NIRLDAAAAGQLAQVIVEAGEEYGRSDRLVGQSINLEFVSANPTGPVHIGGVRWAAVGDA 149 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 L+ L+ +G EV EYY NDAG+QI+ A S+ PE Y G YL + Sbjct: 150 LSRLLRATGAEVGTEYYFNDAGSQIDRFARSLL------AAAKGEPPPEDGYAGAYLTEI 203 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 +++ + ++L + + + V+ M I+ L+ ++ D + +E D H D Sbjct: 204 AQQVQSR-RPDVLALDDAAAQEVFRVEGVELMFAEIKSSLRDFGVEFDTYFNEKDLH--D 260 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + ++ L +QG++ E R+T GDD DR L KS+G Sbjct: 261 RGELELALERLRQQGHISEA----------------DGATWLRTTHFGDDKDRVLRKSNG 304 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCEL 388 +TYFAAD AY+ K ERG++ ++ ++G+DH GY+ R++A+ A + A + +L+ ++ Sbjct: 305 EWTYFAADCAYYLDKRERGYERVVLMLGADHHGYLGRMKAMVACFGDDPAHNLEILIGQM 364 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V L RDG P++MSKRAG + L +VD +G D+ R+ + +D D +++ Sbjct: 365 VNLVRDGAPVRMSKRAGTVVRLEDLVDAIGVDAARYALARYSIDSPIDIDIELWTRATRD 424 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 NPV+YVQY AR S+ R A ++ P + P+ + D E +L+ LAE+P V Sbjct: 425 NPVYYVQYVAARTASVGRNAAEVGLTRG---QPTDFHPELLDHD-KENELLKALAEFPAV 480 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM---RLQLVHA 565 + A +EP+++A YL DLA +H + + R PR + ++T + RL L A Sbjct: 481 VATAAELREPHRIARYLEDLAGAYHRFYDNCRVLPR------GDEEITDLHRARLWLNDA 534 Query: 566 VASIINSGLNIIGVESPNEM 585 +I +GL ++GV +P M Sbjct: 535 TRVVIANGLRLLGVSAPERM 554 >gi|169632154|ref|YP_001705890.1| arginyl-tRNA synthetase [Acinetobacter baumannii SDF] gi|229558749|sp|B0VNJ1|SYR_ACIBS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|169150946|emb|CAO99561.1| arginyl-tRNA synthetase [Acinetobacter baumannii] Length = 596 Score = 307 bits (787), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 191/597 (31%), Positives = 310/597 (51%), Gaps = 77/597 (12%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 + R +D +HG ++N AMI S+ G+ P +AE I+A + D+ IAG GFIN +L Sbjct: 32 LTRTKDRSHGDFASNIAMIGSKAAGMKPRDLAEKILAALPEVADISKAEIAGPGFINFFL 91 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + IL I +GR+ K+ +EFVSANPT +HVGH R A G T+A+L Sbjct: 92 NADQRFAILDQIQAQKESFGRSQSNVAKKIQVEFVSANPTSSLHVGHGRGAAYGMTVANL 151 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + +G +V REYY+NDAG Q++ LA S + RY + L N P+ Y G Y+K + + + Sbjct: 152 LEATGAKVDREYYVNDAGRQMDILATSTYLRYLELLGQNLV-FPKNAYQGDYVKEIAQGI 210 Query: 214 ADK---------------------YSSEL--------LNFPEEKWLP------------- 231 DK Y+ EL L+ +EK + Sbjct: 211 IDKDGDAYVREVANVYKDVPEDVQYAEELDSEGNKVVLSGDKEKHIDGLIANSQQLLGEG 270 Query: 232 --IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 + ++ A++ I+DDL + + + SE + I + ++ L ++G++YE Sbjct: 271 YRVFHQAALHAILDDIKDDLADFGVTFNQWFSEASL----SAKIDEALETLDQRGFLYE- 325 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349 + F+ST GD+ DR + + +G TYFA+D+AY K +RG+ Sbjct: 326 ---------------KDGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGY 370 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 +++ + GSDH GY+ R++A A+ ++ VLL + V L+R G ++MS R+G F+T Sbjct: 371 TDLVDIWGSDHHGYISRVKAAIDAMGYDSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVT 430 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQA 468 LR + EVG+D+ RF + RK+ + +DFD QSK+N V+Y+QYA+AR CR + + A Sbjct: 431 LRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARICRMLEKAA 490 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 L F++ D +E +++ LA YP V+ A A EP+++ YL +L Sbjct: 491 S---TGLQFEVSAARSHAARLSLD-AETEILAKLAAYPDVVLRAANAYEPHQVGNYLKEL 546 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A++FHG ++ + V +++ +LT RL L V ++ +GL ++GV +P M Sbjct: 547 AALFHGWYNEHK-------VLSDDAELTQARLLLSINVQQVLRNGLELLGVSAPEAM 596 >gi|328955732|ref|YP_004373065.1| arginyl-tRNA synthetase [Coriobacterium glomerans PW2] gi|328456056|gb|AEB07250.1| arginyl-tRNA synthetase [Coriobacterium glomerans PW2] Length = 617 Score = 307 bits (786), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 194/612 (31%), Positives = 301/612 (49%), Gaps = 76/612 (12%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 L+ +ERP D ++G ++ A+ ++ G+ P AE +A ++IDP ++ V IAG GF Sbjct: 27 LEDCGVERPADTSNGEWTSTVALRSAKAAGIAPRAFAEAAIAHMRIDPSIERVEIAGPGF 86 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 IN YLS + + G ++ R+ G G ++ +EFVSANP GP+H+GH R A +GD Sbjct: 87 INFYLSTGERNAVFARAREQGADFARSSAGAGIRLQVEFVSANPVGPLHIGHGRWAALGD 146 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ--------------------- 187 +L+ +M +GY+V REYY+ND G Q++ S+ RY Q Sbjct: 147 SLSRVMEHAGYDVEREYYVNDHGNQMDVFGSSISMRYMQLVDIVNKRGVGLETAVQLLSA 206 Query: 188 ---ALYNNDSD---------------LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229 A +DSD L Y G Y+ +L + E + Sbjct: 207 DRDAYIRDDSDEHPELHPYSDRFIDALGANSYGGEYIIETAADLFRRDGDAWAGASESER 266 Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR-------GDPSPIRDIIDNLAR 282 + ++ + M+ IRD + D++ SE + S + L Sbjct: 267 MSAFREQGHRKMLDEIRDLCHDVRCDFDVWFSERSLYEKATTGPDAGTSAVDRAFARLRE 326 Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342 GY+YE + FRST +GDD DR L+K++G YTYFA+D+AY Sbjct: 327 MGYIYESA----------------GAVWFRSTDLGDDKDRVLVKANGDYTYFASDVAYHW 370 Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402 K++R D+ I + GSDH GY+ R+ A A+ + VLL +LV L R G P++MSK Sbjct: 371 DKFQR-VDHAIDIWGSDHHGYIGRVRAACDALG-YPGRFEVLLGQLVNLLRSGKPVRMSK 428 Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462 R G +T R +VDEVG+D+ R+ ++ R ++ +DFD VKE+S +NPV+YVQYA+AR Sbjct: 429 RKGTMVTFRELVDEVGADATRYTLISRSANQTIDFDIDAVKERSMDNPVYYVQYAHARIC 488 Query: 463 SIFRQAKDIFPD----LDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATI 514 SI R+A + L D I ++ D +E L L+E ++ + Sbjct: 489 SILRRAAGVDDKQAALLGMDAVAARSIGDRVDYALLTDPTEFALSRKLSELEELVVSCAR 548 Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENP-RLRFVQANNRKLTMMRLQLVHAVASIINSG 573 + P++L + +LA+ FH + + P R V A +L+ RL AV S+++ Sbjct: 549 DRAPFRLTHFAEELAADFHSFYGACQVLPSETRPVDA---ELSRARLAACDAVRSVLSLV 605 Query: 574 LNIIGVESPNEM 585 L +IGV +P M Sbjct: 606 LGLIGVSAPESM 617 >gi|257791691|ref|YP_003182297.1| arginyl-tRNA synthetase [Eggerthella lenta DSM 2243] gi|257475588|gb|ACV55908.1| arginyl-tRNA synthetase [Eggerthella lenta DSM 2243] Length = 575 Score = 307 bits (786), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 193/580 (33%), Positives = 310/580 (53%), Gaps = 64/580 (11%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +ERPRD ++G ++ AM ++ +P IA++IV + + + SV IAG GFIN+ Sbjct: 33 ALERPRDESNGDWASTVAMRSAKLAKKNPREIAQIIVDHLPENDMIASVDIAGPGFINIR 92 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGT-KVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+ + L+ ++++ ++G+ I +G K+N+E++SANPTGP+HVGH R A +GD A Sbjct: 93 LANAVLQGVVAAARAEKDDFGKGEIPEGERKINLEYISANPTGPLHVGHGRWAALGDATA 152 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +M +GY+V E+YINDAG Q++ SV RYQQ L D ++PE Y G Y+K + + Sbjct: 153 RVMRHAGYDVFEEFYINDAGTQMDNFGESVAVRYQQ-LLGRDVEMPEACYAGSYVKDIAQ 211 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI--QHDI----------F 259 + D+ +KWL D + M+ R+ A + QH + + Sbjct: 212 TIIDEDG--------DKWL----DADPKERMENFRERAYAYELAEQHRVTERFGTTFGCW 259 Query: 260 ISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 SE + D S + + + +GY+Y ++ FRS+ Sbjct: 260 FSERSLYVPDEDGLSAVDRSLKAMDEKGYIY----------------VEDGATWFRSSAF 303 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 D+ DR L+K++G TYF +D+AY K ERGFD++I + G+DH GY+ R EA+ AA Sbjct: 304 DDEKDRVLIKANGEMTYFMSDVAYHYNKMERGFDHLINIWGADHHGYIARCEAMLAAWGW 363 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 A + ++L +LV L+RDG ++MSKR G+ IT ++DEVG D+ R++ML + + + +D Sbjct: 364 PGA-LEIMLGQLVNLFRDGEAVRMSKRTGEMITFEELIDEVGVDATRYLMLAKSSDQPID 422 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP-------DLDFDLFPRNVIPQES 489 FD K++ NPV+YVQYA+AR SI R+A D D+ D VIP Sbjct: 423 FDIEVAKKKDASNPVYYVQYAHARICSILRKAADPADAEAAANGDMSMDELASKVIPANV 482 Query: 490 EFD----TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 + SEL L+ + ++ ++ A + ++L Y DLAS+FH +++ Sbjct: 483 DLSPLTHESELALMRKMDDFGPLVAQAARDRAAFRLTHYAQDLASLFHSFYTNCH----- 537 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V +T RL LV A ++ L+++GV +P +M Sbjct: 538 --VIGEEEAVTNARLALVDATRIVLAKTLDLLGVSAPAKM 575 >gi|77163574|ref|YP_342099.1| arginyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707] gi|254435764|ref|ZP_05049271.1| arginyl-tRNA synthetase [Nitrosococcus oceani AFC27] gi|109895010|sp|Q3JF27|SYR_NITOC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|76881888|gb|ABA56569.1| arginyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707] gi|207088875|gb|EDZ66147.1| arginyl-tRNA synthetase [Nitrosococcus oceani AFC27] Length = 585 Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 203/588 (34%), Positives = 311/588 (52%), Gaps = 62/588 (10%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 D+I ++R RD +HG ++N +M+L++ P +A+LIVAR+ P V V IAG GFI Sbjct: 28 DKIQVQRTRDKSHGDFASNISMVLAKEARQKPQKLADLIVARLPEHPWVKKVDIAGPGFI 87 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N L+ + ++S ++ +GR G G V++EFVSANPTGP+HVGH R A GD Sbjct: 88 NFTLALPAFQAVVSQVLEQKESFGRCRTGHGKTVHLEFVSANPTGPLHVGHGRGAAYGDA 147 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 LA L+ GY+V REYY+NDAG Q++ LA+SV+ RY + L P Y G Y++++ Sbjct: 148 LARLLTAVGYQVHREYYVNDAGRQMDILAVSVWLRYLE-LCGETLPFPSNGYQGEYVRNI 206 Query: 210 GK-------ELADKYSSELL-NFP-------EEKWLPI----------------VKDYSV 238 + +L ++E+L P EK+L V + ++ Sbjct: 207 ARSLKAGEEDLPHHSATEILAGLPADAPTGDREKYLDALIQKIKNLLGKNSYQKVFEQAL 266 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 ++ IR+DL + +D + SE H + I I+ L G++Y Sbjct: 267 NTILAGIREDLAKFGVTYDAWFSER--HLTEMGAIEIAIERLKAAGHLY----------- 313 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 QK F +T GD+ DR +++ +G TYFA+D+AY K E+G+ +I + G+ Sbjct: 314 -QKAGA----WWFYATNFGDEKDRVVIRENGQPTYFASDIAYHLSKLEQGYHKIIDIWGA 368 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ Q+++ L + LYR I+MS R+G+F+TLR + EVG Sbjct: 369 DHHGYIPRIKASLQALGADLQQLDIQLVQFAILYRGKEKIQMSTRSGEFVTLRELCQEVG 428 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ RF + R + +DFD K QS ENPV+YVQYA+AR S+FRQ K +F Sbjct: 429 KDAARFFYVMRGAEQHMDFDLELAKSQSNENPVYYVQYAHARICSVFRQLK----TREFV 484 Query: 479 LFPRNVIPQESEFDTS-ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 + + + E+ L+ L+ Y V+E+A I P+ LA+YL DLA FH ++ Sbjct: 485 WNSEQGREHLGKLNEAHEVTLLDRLSCYSEVVESAAIQSAPHLLAYYLLDLARDFHTYY- 543 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N V + +L RL L+ A +I +GL ++GV +P M Sbjct: 544 ----NAHTFLV--DIPELRDARLALIAATRQVIKNGLTLLGVSAPESM 585 >gi|311743944|ref|ZP_07717750.1| arginine--tRNA ligase [Aeromicrobium marinum DSM 15272] gi|311313074|gb|EFQ82985.1| arginine--tRNA ligase [Aeromicrobium marinum DSM 15272] Length = 554 Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 180/567 (31%), Positives = 294/567 (51%), Gaps = 38/567 (6%) Query: 22 IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSV 81 + + + D +++ERP+ HG +TN A+ L++ G++P +A+ + + V + Sbjct: 23 LNLPGGVPDTVLVERPKVREHGDYATNIALRLAKQAGVNPRELAQHLADALVGHDGVAAA 82 Query: 82 FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 IAG GF+N+ ++ + + ++ +G YG + G ++N+EFVSANPTGP+H+G Sbjct: 83 EIAGPGFLNIRVAAGAQGTVAADVLTAGDAYGSGDLYAGQRINLEFVSANPTGPIHIGGV 142 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEG 199 R A VGD L ++ G EVTREYY ND GAQI+ A S+ R Q A PE Sbjct: 143 RWAAVGDCLGRILTAVGGEVTREYYFNDHGAQIDRFARSLLASARGQAA--------PED 194 Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259 Y G Y+ + +++ + + P+++ + + V+ M I+ L + D++ Sbjct: 195 GYGGQYIHDIARDVVAVHPGA-ADLPDDEATEVFRAAGVEQMFGEIKASLHDFGVDFDVY 253 Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319 E+D H + + I L G +Y+ R++ GDD Sbjct: 254 FHENDLH--ESGAVDRAIARLTELGKMYQ----------------SEGATWLRTSDFGDD 295 Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKK 378 DR ++KSDG Y + DLAY+ K ERGFD + ++G+DH GYV R+ A+ AA E Sbjct: 296 KDRVVVKSDGEPAYISGDLAYYLDKRERGFDRCLIMLGADHHGYVSRMLAMCAAFGDEPG 355 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438 + +L+ ++V L RDG P++MSKRAG ++L +V+ +G D+ R+ + +D D Sbjct: 356 VNLELLIGQMVNLVRDGEPLRMSKRAGTVVSLEDLVEAIGVDAARYALARYSTDSTIDID 415 Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498 + +NPV+YVQYA+AR SI R A D+ +D + F + + E +L Sbjct: 416 LDLWAKADSDNPVYYVQYAHARLSSILRNAADLGLGVDLEGFDPGQLSTDREG-----EL 470 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 + LAEYPR++ A +EP+++A YL +A FH + R P+ + L Sbjct: 471 LRSLAEYPRLVARAAELREPHRVARYLESVAGSFHQFYDQCRVLPQ---GDEDATDLHRA 527 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 RL LV A ++ +GL ++GV +P M Sbjct: 528 RLVLVAATRQVVANGLALLGVGAPERM 554 >gi|221199858|ref|ZP_03572901.1| arginyl-tRNA synthetase [Burkholderia multivorans CGD2M] gi|221207473|ref|ZP_03580482.1| arginyl-tRNA synthetase [Burkholderia multivorans CGD2] gi|221172676|gb|EEE05114.1| arginyl-tRNA synthetase [Burkholderia multivorans CGD2] gi|221180097|gb|EEE12501.1| arginyl-tRNA synthetase [Burkholderia multivorans CGD2M] Length = 598 Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 205/616 (33%), Positives = 315/616 (51%), Gaps = 62/616 (10%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L AD ++ + LK D + I +ERP+ AHG ++ N AM L++PLG +P Sbjct: 12 LLADSVQQVAHALKGADAANAGVAFVAPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 71 Query: 63 TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +AE IVA + P V+S IAG GFINL LS + + ++ +++ G +G + Sbjct: 72 QLAEKIVAALTAQPGAQGLVESAEIAGPGFINLRLSAAAKQAVIGAVLEQGRAFGTSDRE 131 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAGAQI LA Sbjct: 132 KGKRVLLEFVSANPTGPLHVGHGRQAALGDALANVIASQGYAVHREFYYNDAGAQIGNLA 191 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPI 232 +S R + L D+ PE Y G Y+ + G+ +A K + + L Sbjct: 192 ISTQAR-ARGLKPGDAGWPEAAYNGEYIADIARDYMNGETVAAKDGEPVKGAGDVDDLDA 250 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + + DL+A ++ D + E + + +D L + G YE Sbjct: 251 IRKFAVAYLRREQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALIKAGMTYE---- 304 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L R+T GDD DR + KSDG+YTYF D+AY K+ERGF + Sbjct: 305 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTKV 352 Query: 353 IYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 I + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+ Sbjct: 353 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTV 412 Query: 411 R-----------------HVVDEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 R ++DE G D+VRF ++ RK FD +Q+ EN Sbjct: 413 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 472 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 PV+YVQYA+AR S+ + K + + + P+ + Q + + L+ LAEYP ++ Sbjct: 473 PVYYVQYAHARICSVLNEWKSRY-NGELAQLPQADLSQLTSPQAAS--LMQKLAEYPDML 529 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 +A P+ +AFYL DLA FH ++ R V ++ R L+ A + Sbjct: 530 THAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 582 Query: 570 INSGLNIIGVESPNEM 585 + +GL ++GV +P +M Sbjct: 583 LENGLAMLGVSAPAKM 598 >gi|319944918|ref|ZP_08019180.1| arginine--tRNA ligase [Lautropia mirabilis ATCC 51599] gi|319741488|gb|EFV93913.1| arginine--tRNA ligase [Lautropia mirabilis ATCC 51599] Length = 575 Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 199/601 (33%), Positives = 307/601 (51%), Gaps = 60/601 (9%) Query: 11 LKNYLKEIDCKIKVEKKILDRIV--IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68 L+ L I VE ++ + +ERPR HG L+TN AM L+RPL P +AE + Sbjct: 9 LRQLLAHTMQAIGVEAELAASVTPSLERPRQADHGDLATNLAMQLARPLKKSPRAVAEQL 68 Query: 69 VARIKIDPDVDSVF----IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 VA + P + IAG GFIN L+P+ ++++ ++ G ++G+ G +V Sbjct: 69 VAALMEQPGATDLIAQAEIAGPGFINFRLTPAAHQRVVHEVLTQGEQFGQQ-PSNGQQVM 127 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGP+HVGH R A +GD L +L+A G++V RE+Y NDAGAQI+ LALSV R Sbjct: 128 LEFVSANPTGPLHVGHGRQAALGDVLGNLLASQGWKVHREFYYNDAGAQIHNLALSVQAR 187 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW------LPIVKDYSV 238 + + +D P Y G Y+ + + + + ++ P E L V+ ++V Sbjct: 188 -GRGISPDDPSFPADGYRGDYIAEIARAFVARETVQVNGQPPETATGDLDDLDAVRRFAV 246 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + DL A + D + E + + + + L G+ +E Sbjct: 247 ACLRREQDLDLAAFGVSFDRYYLESSLY--TDGKVEEAVARLVAGGHTFE---------- 294 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 L R+T GDD DR + KS+G YTYF D+AY K++RGF I + GS Sbjct: 295 ------QDGALWLRTTDYGDDKDRVMRKSEGGYTYFVPDVAYHLGKWQRGFTQAINIQGS 348 Query: 359 DHSGYVKRLEAVAAAVSEK--KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV-- 414 DH G V R+ A A+ K + +L ++VR+ R+G +K+SKRAG ++TLR ++ Sbjct: 349 DHHGTVARVRAGLQALDMGIPKGYPDYVLHKMVRVMRNGEEVKISKRAGSYVTLRDLIEW 408 Query: 415 ----DEV-GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA- 468 DE G D+VRF ++ RK FD +S ENPV+YVQYA+AR SI QA Sbjct: 409 SGGGDETRGRDAVRFFLISRKGDTEFTFDVDLALSRSDENPVYYVQYAHARICSILAQAA 468 Query: 469 ----KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 + + R P +E L+ +A +P ++ A P++LA+Y Sbjct: 469 ERGGQSAGAEGRGAHIDRLTAP-------TEYALMARMAAFPAMLTEAARELAPHQLAYY 521 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 L DLA+ FH ++ R V ++ +L R+ L+ AV +++ G+ +IGV +P Sbjct: 522 LKDLAADFHAFYNAER-------VLVDDAELQSARMALLEAVRTVLRRGMALIGVSAPER 574 Query: 585 M 585 + Sbjct: 575 L 575 >gi|227547994|ref|ZP_03978043.1| arginyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291] gi|227079900|gb|EEI17863.1| arginyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291] Length = 550 Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 194/585 (33%), Positives = 298/585 (50%), Gaps = 42/585 (7%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD ++ ++ + ++ ++ + + +ERPR+ HG +TN A+ +++ G +P Sbjct: 4 ADLATAIRQATTTVLTDHDLDATVVPETVTVERPRNPEHGDYATNIALQVAKRAGTNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A +V + DP + S +AG GFINL L+ K+++ I+ +G YGR+ I G KV Sbjct: 64 LAGWLVDALASDPAIASADVAGPGFINLRLAADAQGKLVADILEAGQNYGRSDIYAGEKV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++ +G EVTREYY ND G QI+ A S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEAAGAEVTREYYFNDHGGQIDRFARSLVA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + P+ Y G Y+ + + DK+ L E + V M Sbjct: 184 AAKG------EPTPQDGYGGAYISEIAAGVVDKHEGALEGTDAEVQ-ETFRAAGVDMMFA 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L ++ D++ E+ + + + L G +YE Sbjct: 237 HIKRSLADFGVEFDVYFHENSLF--ESGAVDKAVATLKDNGNLYE--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 RST GDD DR ++KSDG Y A D+AY K++RG IY++G+DH GY Sbjct: 280 -SDGAWWLRSTDFGDDKDRVVIKSDGDAAYIAGDIAYVADKFDRGHTLAIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL A A A+ + VL+ ++V L R+G P+KMSKRAG ITL +VD +G D R Sbjct: 339 IARLRAAAQALGYDADAVEVLIGQMVNLVRNGKPVKMSKRAGTIITLEDLVDAIGVDGAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLF 480 + + + LD D QS +NPV+YVQY +AR SI R+A + F D D L Sbjct: 399 YSLARSSVDQTLDIDLDLWTRQSSDNPVYYVQYGHARLCSIARRASEAGVSFADPDLGL- 457 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 + E E D LI L EYP V++ A +EP+++A Y+ +LAS FH + + Sbjct: 458 ----LAHEKEGD-----LIRTLGEYPAVVKAAAELREPHRVARYVEELASSFHKFYDACQ 508 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P+ + + RL L A ++ + L+++GV +P M Sbjct: 509 ILPK---AGEDAEPIHEARLALAMATRQVLANALDLLGVSAPERM 550 >gi|317487839|ref|ZP_07946432.1| arginyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA] gi|316913114|gb|EFV34630.1| arginyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA] Length = 578 Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 193/580 (33%), Positives = 310/580 (53%), Gaps = 64/580 (11%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +ERPRD ++G ++ AM ++ +P IA++IV + + + SV IAG GFIN+ Sbjct: 36 ALERPRDESNGDWASTVAMRSAKLAKKNPREIAQIIVDHLPENDMIASVDIAGPGFINIR 95 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGT-KVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+ + L+ ++++ ++G+ I +G K+N+E++SANPTGP+HVGH R A +GD A Sbjct: 96 LANAVLQGVVAAARAEKDDFGKGEIPEGERKINLEYISANPTGPLHVGHGRWAALGDATA 155 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +M +GY+V E+YINDAG Q++ SV RYQQ L D ++PE Y G Y+K + + Sbjct: 156 RVMRHAGYDVFEEFYINDAGTQMDNFGESVAVRYQQ-LLGRDVEMPEACYAGSYVKDIAQ 214 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI--QHDI----------F 259 + D+ +KWL D + M+ R+ A + QH + + Sbjct: 215 TIIDEDG--------DKWL----DADPKERMENFRERAYAYELAEQHRVTERFGTTFGCW 262 Query: 260 ISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 SE + D S + + + +GY+Y ++ FRS+ Sbjct: 263 FSERSLYVPDEDGLSAVDRSLKAMDEKGYIY----------------VEDGATWFRSSAF 306 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 D+ DR L+K++G TYF +D+AY K ERGFD++I + G+DH GY+ R EA+ AA Sbjct: 307 DDEKDRVLIKANGEMTYFMSDVAYHYNKMERGFDHLINIWGADHHGYIARCEAMLAAWGW 366 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 A + ++L +LV L+RDG ++MSKR G+ IT ++DEVG D+ R++ML + + + +D Sbjct: 367 PGA-LEIMLGQLVNLFRDGEAVRMSKRTGEMITFEELIDEVGVDATRYLMLAKSSDQPID 425 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP-------DLDFDLFPRNVIPQES 489 FD K++ NPV+YVQYA+AR SI R+A D D+ D VIP Sbjct: 426 FDIEVAKKKDASNPVYYVQYAHARICSILRKAADPADAEAAANGDMSMDDLASKVIPANV 485 Query: 490 EFD----TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 + SEL L+ + ++ ++ A + ++L Y DLAS+FH +++ Sbjct: 486 DLSPLTHESELALMRKMDDFGPLVAQAARDRAAFRLTHYAQDLASLFHSFYTNCH----- 540 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V +T RL LV A ++ L+++GV +P +M Sbjct: 541 --VIGEEEAVTNARLALVDATRIVLAKTLDLLGVSAPAKM 578 >gi|284123123|ref|ZP_06386895.1| Arginyl-tRNA synthetase [Candidatus Poribacteria sp. WGA-A3] gi|283829298|gb|EFC33702.1| Arginyl-tRNA synthetase [Candidatus Poribacteria sp. WGA-A3] Length = 528 Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 177/503 (35%), Positives = 287/503 (57%), Gaps = 26/503 (5%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFINL 91 +++ P+ G LS++ AM++++ PL +A++I +++ ++ + +A GF+N Sbjct: 36 IVDFPKREEWGDLSSSVAMVIAKQEKRPPLEVAQMIADQLRTSCTFLEKISVAPPGFLNF 95 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L +L I +G YG + IG+G +V +EFVSANPTGP+H+GH R A +G+ LA Sbjct: 96 SLQQDCWFPVLEEIERTGDLYGHSKIGQGQRVLLEFVSANPTGPLHMGHGRGAALGEALA 155 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 L+ +GYEV +EYYINDAG Q+ LA SV+ RY + ++ + PE Y G Y+K + + Sbjct: 156 RLLRSAGYEVDKEYYINDAGRQMKLLADSVYARYLE-MHGREYSFPEDGYHGDYIKALAQ 214 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD-FHRGDP 270 + +LL E ++ + +++ I++DL ++ + + SE F G Sbjct: 215 AMDRVKGMDLLALNPEDARRECGHWASRELVRAIQEDLAQFGVEFETWYSEASLFASGS- 273 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I+ +++L ++ V+ TQ FRS+ D+ DR + K DG Sbjct: 274 --IQAALNDLEQRDLVF-----------TQD-----DATWFRSSRFQDEKDRVVCKQDGD 315 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTY A+D+AY K RG+ +I + G+DH GYV R++AV A + V+L ++VR Sbjct: 316 YTYLASDIAYHFDKLRRGYGWLINIWGADHHGYVPRMQAVIKAFGYGDDCLRVVLVQMVR 375 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L R G ++MSKRAG+FITL+ VVDEVG+D+ +F L R++ L+FD K+QS ENP Sbjct: 376 LLRGGNKVEMSKRAGEFITLQDVVDEVGADAAKFFFLMRRSDTHLEFDLELAKKQSNENP 435 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+YVQYA+AR S+FR A + + P P + E++L+ L+ +P ++E Sbjct: 436 VYYVQYAHARLASLFRTAH----ERGIRVSPVGEAPLSALVQPEEIRLMKQLSGFPGLLE 491 Query: 511 NATIAQEPYKLAFYLYDLASVFH 533 + +A EP+++ FYL +LA + H Sbjct: 492 ASAMALEPHRITFYLLELAGLLH 514 >gi|325830658|ref|ZP_08164079.1| arginine--tRNA ligase [Eggerthella sp. HGA1] gi|325487404|gb|EGC89846.1| arginine--tRNA ligase [Eggerthella sp. HGA1] Length = 575 Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 193/580 (33%), Positives = 310/580 (53%), Gaps = 64/580 (11%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +ERPRD ++G ++ AM ++ +P IA++IV + + + SV IAG GFIN+ Sbjct: 33 ALERPRDESNGDWASTVAMRSAKLAKKNPREIAQIIVDHLPENDMIASVDIAGPGFINIR 92 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGT-KVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+ + L+ ++++ ++G+ I +G K+N+E++SANPTGP+HVGH R A +GD A Sbjct: 93 LANAVLQGVVAAARAEKDDFGKGEIPEGERKINLEYISANPTGPLHVGHGRWAALGDATA 152 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +M +GY+V E+YINDAG Q++ SV RYQQ L D ++PE Y G Y+K + + Sbjct: 153 RVMRHAGYDVFEEFYINDAGTQMDNFGESVAVRYQQ-LLGRDVEMPEACYAGSYVKDIAQ 211 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI--QHDI----------F 259 + D+ +KWL D + M+ R+ A + QH + + Sbjct: 212 TIIDEDG--------DKWL----DADPKERMENFRERAYAYELAEQHRVTERFGTTFGCW 259 Query: 260 ISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 SE + D S + + + +GY+Y ++ FRS+ Sbjct: 260 FSERSLYVPDEDGLSAVDRSLKAMDEKGYIY----------------VEDGATWFRSSAF 303 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 D+ DR L+K++G TYF +D+AY K ERGFD++I + G+DH GY+ R EA+ AA Sbjct: 304 DDEKDRVLIKANGEMTYFMSDVAYHYNKMERGFDHLINIWGADHHGYIARCEAMLAAWGW 363 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 A + ++L +LV L+RDG ++MSKR G+ IT ++DEVG D+ R++ML + + + +D Sbjct: 364 PGA-LEIMLGQLVNLFRDGEAVRMSKRTGEMITFEELIDEVGVDATRYLMLAKSSDQPID 422 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP-------DLDFDLFPRNVIPQES 489 FD K++ NPV+YVQYA+AR SI R+A D D+ D VIP Sbjct: 423 FDIEVAKKKDASNPVYYVQYAHARICSILRKAADPADAEAAANGDMSMDDLASKVIPANV 482 Query: 490 EFD----TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 + SEL L+ + ++ ++ A + ++L Y DLAS+FH +++ Sbjct: 483 DLSPLTHESELALMRKMDDFGPLVAQAARDRAAFRLTHYAQDLASLFHSFYTNCH----- 537 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V +T RL LV A ++ L+++GV +P +M Sbjct: 538 --VIGEEEAVTNARLALVDATRIVLAKTLDLLGVSAPAKM 575 >gi|325521346|gb|EGD00194.1| arginyl-tRNA synthetase [Burkholderia sp. TJI49] Length = 593 Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 203/616 (32%), Positives = 316/616 (51%), Gaps = 67/616 (10%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L AD ++ + LK D + I +ERP+ AHG ++ N AM L++PLG +P Sbjct: 12 LLADSVKQVAHALKGADAAF-----VAPTITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66 Query: 63 TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +AE IVA + PD V++ IAG GFINL L+ + + ++++++ G +G + Sbjct: 67 QLAEKIVAELTARPDAQGLVEAAEIAGPGFINLRLTAAAKQAVVTAVLAQGRAFGTSERE 126 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA Sbjct: 127 KGKRVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPI 232 +S R + L D+ PE Y G Y+ + G+ +A K + + + L Sbjct: 187 ISTQAR-ARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAAKDGEPVKGAGDVEDLDA 245 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + DL+A ++ D + E + + +D L + G YE Sbjct: 246 IRKFAVAYLRHEQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALIKAGMTYE---- 299 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L R+T GDD DR + KSDG+YTYF D+AY K+ERGF + Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTQV 347 Query: 353 IYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 I + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+ Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKLSKRAGSYVTV 407 Query: 411 R-----------------HVVDEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 R ++DE G D+VRF ++ RK FD +Q+ EN Sbjct: 408 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 PV+YVQYA+AR S+ + K + +++ P + Q + + L+ LAEYP ++ Sbjct: 468 PVYYVQYAHARICSVLNELKSRY-NVEVAQLPGADLSQLTSPQAA--SLMQKLAEYPDML 524 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 +A P+ +AFYL DLA FH ++ R V ++ R L+ A + Sbjct: 525 THAAKELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577 Query: 570 INSGLNIIGVESPNEM 585 + +GL ++GV +P +M Sbjct: 578 LENGLAMLGVSAPAKM 593 >gi|296119500|ref|ZP_06838058.1| arginine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306] gi|295967383|gb|EFG80650.1| arginine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306] Length = 550 Score = 306 bits (785), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 192/582 (32%), Positives = 300/582 (51%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD S LK ++ ++ +L + + +ERPR+ HG +TN A+ +++ G++P Sbjct: 4 ADLSLLLKESALQVFESHDLDTSVLPEAVTVERPRNPEHGDYATNVALQVAKKAGVNPRQ 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +AE + + +D IAG GF+N+ L+ + +I+S I +G YG KV Sbjct: 64 LAEWLAEALAKSDAIDVAEIAGPGFLNIRLAAAAQGEIVSQIAAAGANYGNGEAMADLKV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L + +G VTREYY ND G QI+ A S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRIFEAAGATVTREYYFNDHGGQIDRFARSLV- 182 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 A N+ PE Y G Y+ + E+ + L P E + V+ M + Sbjct: 183 ----AAAKNEP-TPEDGYGGQYIHDIAAEVLRQKDDALEGTPAEVQENF-RSLGVEMMFE 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ DL + D++ E+ + + +D L G +YE Sbjct: 237 QIKQDLHEFGVDFDVYFHENSLF--ESGAVDKALDQLKTSGQMYE--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 +ST GD DR ++KSDG+ Y A D+AY K++RG + IY++G+DH GY Sbjct: 280 -TEGAWWLKSTDYGDSKDRVVIKSDGNAAYIAGDIAYVADKFDRGHNLNIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 V RL+A AAA+ + VL+ ++V L RDG+ +KMSKRAG IT+ +V+ +G D+ R Sbjct: 339 VPRLKAAAAALGYDADAVEVLIGQMVNLLRDGVAVKMSKRAGTVITMNDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ + +D D QS ENPV+YVQY +AR SI R+A++ + D + Sbjct: 399 YSLVRSSVDQSIDIDLGLWAAQSSENPVYYVQYGHARLCSIQRKAEE--AGVTSDAADLS 456 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ E E D LI L E+P V+ + +EP+++A Y DLASVFH + + P Sbjct: 457 LLTHEREGD-----LIRTLGEFPAVVAESAQLREPHRVARYAEDLASVFHKFYDQCQILP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + RL L A ++ + L ++GV +P +M Sbjct: 512 K---AGDEAEPIHGARLALAQATRQVLANALGMVGVSAPEKM 550 >gi|161523565|ref|YP_001578577.1| arginyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|189351665|ref|YP_001947293.1| arginyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|221211064|ref|ZP_03584043.1| arginyl-tRNA synthetase [Burkholderia multivorans CGD1] gi|238687040|sp|A9AE58|SYR_BURM1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|160340994|gb|ABX14080.1| arginyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|189335687|dbj|BAG44757.1| arginyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|221168425|gb|EEE00893.1| arginyl-tRNA synthetase [Burkholderia multivorans CGD1] Length = 598 Score = 306 bits (784), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 204/616 (33%), Positives = 314/616 (50%), Gaps = 62/616 (10%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L AD ++ + LK D + I +ERP+ AHG ++ N AM L++PLG +P Sbjct: 12 LLADSVQQVAHALKGADAANAGVAFVAPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 71 Query: 63 TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +AE IVA + P V+S IAG GFINL LS + + ++ +++ G +G + Sbjct: 72 QLAEKIVAALTAQPGAQGLVESAEIAGPGFINLRLSAAAKQAVIGAVLAQGRAFGTSDRE 131 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA Sbjct: 132 KGKRVLLEFVSANPTGPLHVGHGRQAALGDALANVIASQGYAVHREFYYNDAGVQIGNLA 191 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPI 232 +S R + L D+ PE Y G Y+ + G+ +A K + + L Sbjct: 192 ISTQAR-ARGLKPGDAGWPEAAYNGEYIADIARDYMNGETVAAKDGEPVKGAGDVDDLDA 250 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + + DL+A ++ D + E + + +D L + G YE Sbjct: 251 IRKFAVAYLRREQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALIKAGMTYE---- 304 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L R+T GDD DR + KSDG+YTYF D+AY K+ERGF + Sbjct: 305 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTKV 352 Query: 353 IYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 I + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+ Sbjct: 353 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTV 412 Query: 411 R-----------------HVVDEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 R ++DE G D+VRF ++ RK FD +Q+ EN Sbjct: 413 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 472 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 PV+YVQYA+AR S+ + K + + + P+ + Q + + L+ LAEYP ++ Sbjct: 473 PVYYVQYAHARICSVLNEWKSRY-NGELAQLPQADLSQLTSPQAAS--LMQKLAEYPDML 529 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 +A P+ +AFYL DLA FH ++ R V ++ R L+ A + Sbjct: 530 THAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 582 Query: 570 INSGLNIIGVESPNEM 585 + +GL ++GV +P +M Sbjct: 583 LENGLAMLGVSAPEKM 598 >gi|313678427|ref|YP_004056167.1| arginine--tRNA ligase [Mycoplasma bovis PG45] gi|312950101|gb|ADR24696.1| arginine--tRNA ligase [Mycoplasma bovis PG45] Length = 539 Score = 306 bits (784), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 204/584 (34%), Positives = 311/584 (53%), Gaps = 53/584 (9%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D +L+N L+EI + +++ + + E + HG LSTN A+ S L+P+ +A Sbjct: 5 DLKEKLENKLREIASDLGIQRNVF---LTESKK---HGDLSTNMALGNSN---LNPMELA 55 Query: 66 ELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 I++ I + ++ +A GFIN + YL ++ I+ G YG+ K KVN Sbjct: 56 RKIISMIDAGEFGIKNMTVANPGFINFSIGDDYLVSGVNQILHLGSNYGKG--NKLGKVN 113 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EF+SANPTG +HVGH R A VG T+A+++ F+GY V REYYINDAG QIN LA S++ R Sbjct: 114 VEFISANPTGFLHVGHARNAAVGSTIANILEFAGYSVNREYYINDAGNQINVLANSLWAR 173 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP-EEKWLPIVKDYSVQAMMK 243 Y+Q Y D +PE Y G + ++ +KY + + + + + +VK+ ++ M Sbjct: 174 YKQIFY-PDFQMPEESYKGEDIIWGAQKFYEKYKDKYKDCELDTELIKLVKEEAISIFMA 232 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I++DL ++ D + SE + D + I++ I NL + Y +G Sbjct: 233 KIQEDLANFGVKFDTYFSEKSLYENDGAKIKETIKNL-KNAYESDG-------------- 277 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFD-NMIYVMGSDHS 361 L ++T+ GDD DR L+KSDGSYTYF D+ Y + KY R G D +I V G+DHS Sbjct: 278 ----ALWLKTTIHGDDKDRVLVKSDGSYTYFLPDIVYHQDKYRRMGKDATIINVWGADHS 333 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 GYVKR++ + + VL +LVRL ++G KMSKR G L V VG DS Sbjct: 334 GYVKRMQCAVRDLGLNDNNLVVLCMQLVRLIKNGEEFKMSKRKGTSFFLSEFVKMVGKDS 393 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 RF++L R + LDFD QS +NP VQYA ARC S+ ++A D Sbjct: 394 ARFLLLDRTLNSKLDFDIDLATSQSNDNPAILVQYANARCHSLIKKAS-------VDTSN 446 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + I + + D + LI L E+P VIE + + L YL LA F+ +++ Sbjct: 447 LSAISYDKQSDNN---LITKLLEFPLVIEKSADKYATHLLTQYLVKLAKEFNSWYTN--- 500 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +P+L + ++N + ++ LV AV+ I +GL ++ V +P M Sbjct: 501 SPKL--IGSDNEQ---SQIALVKAVSITIENGLKLLEVSAPTSM 539 >gi|326203285|ref|ZP_08193150.1| arginyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782] gi|325986543|gb|EGD47374.1| arginyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782] Length = 564 Score = 306 bits (784), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 197/558 (35%), Positives = 301/558 (53%), Gaps = 34/558 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90 I IE PR+ HG STN AM +++ P IA+ I+ I D + V AG GFIN Sbjct: 37 ITIEIPREKGHGDFSTNVAMQITKTAKKAPRQIADTIIKNIITDGTYIKKVDCAGPGFIN 96 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 L SYL + +S I YGR IG G KV +EFVSANPTGP+H+G+ R +GD + Sbjct: 97 FTLDNSYLYETISIIEQEKENYGRIDIGNGKKVMVEFVSANPTGPLHMGNARGGALGDCI 156 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHV 209 AS++ +GY VTRE+ INDAG QI S+ RY Q + D+ + PE Y G + Sbjct: 157 ASVLDAAGYNVTREFLINDAGNQIEKFGTSLEARYIQLIKGEDAIEFPEDGYHGEDIAEH 216 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 ++ + + +N E+ I D+++ + I++ L++ I D++ SE H+ Sbjct: 217 MRDFIAIHGDKYINTDSEERKKIFVDFALPRNIARIKEGLESYGIHFDVWFSEQTLHK-- 274 Query: 270 PSPIRDIIDNLARQGYVYEGI-LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 G V E I L + T +K L + +++G + D L++++ Sbjct: 275 -------------SGEVAETIQLLKDRDCTVEK----EGALWLKGSVIGSEKDEVLVRNN 317 Query: 329 GSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387 G TYFAAD+AY + K+E RGF+ +I + G+DH G+V R++A AA+ +++V+L + Sbjct: 318 GIPTYFAADIAYHRNKFEKRGFEWVINLWGADHHGHVARMKAAMAAIGVDPDRLDVVLFQ 377 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 LVRLYR+G +MSKR G I+L +V+EVG D VRF + + LDFD ++S Sbjct: 378 LVRLYRNGEIARMSKRTGKSISLMDLVEEVGRDGVRFFFNTKASGSHLDFDLDLAVKESN 437 Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 ENPVFYVQYA+AR S+F+ + L + I E EL+LI L+EYP Sbjct: 438 ENPVFYVQYAHARICSMFK----LLESEGIRLPAASEIKAELLDKLEELELIRKLSEYPD 493 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 + + EP +L Y++++AS FH ++ R V+ +L RL LV+ Sbjct: 494 EVRISAETLEPSRLTRYVHEVASTFHSFYNACR-------VRGEEEELMKARLVLVNCTR 546 Query: 568 SIINSGLNIIGVESPNEM 585 ++I + L+++ + +P M Sbjct: 547 TVIKNVLDLLSINAPERM 564 >gi|313631877|gb|EFR99036.1| arginyl-tRNA synthetase [Listeria seeligeri FSL N1-067] Length = 441 Score = 306 bits (783), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 175/473 (36%), Positives = 264/473 (55%), Gaps = 39/473 (8%) Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176 GKG K IEFVSANPTG +H+GH R A +GD+LA++M +G+ V+REYYINDAG QIN Sbjct: 4 FGKGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMTMAGFNVSREYYINDAGNQINN 63 Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236 L LS RY +AL +S+ PE Y G + +GK+LA KY + +N EE+ + + Sbjct: 64 LVLSAEARYFEAL-GLESNFPEDGYRGADIISLGKDLAAKYGDKYVNTSEEERRSVFRVD 122 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 ++ +R DL+ + D + SE + + + + ++ L GY+YE Sbjct: 123 ALDFETDKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE-------- 172 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 D L R+T DD DR L+KSDGSYTYF D+AY K ERGFD +I + Sbjct: 173 -------QDGATWL-RTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIW 224 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G+DH GY+ R+ A A+ Q+ V + +LV L+ DG+ +KMSKR G +T+R +++E Sbjct: 225 GADHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEE 284 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK----DIF 472 VG D+ R+ R + ++FD K S +NPV+YVQYA+AR SI R K D+ Sbjct: 285 VGLDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRAGKEQNLDVS 344 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 + D L + E+E+D L+ L E+ V+ A + + P+++ YL DLA+ F Sbjct: 345 KEADMSL-----LQTEAEYD-----LLKVLGEFADVVAEAAVKRAPHRIVRYLNDLAAAF 394 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H ++ + + +N ++T RL L+ + +GL ++GV +P +M Sbjct: 395 HRFYNSN------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 441 >gi|262281322|ref|ZP_06059103.1| arginyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202] gi|262257148|gb|EEY75885.1| arginyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202] Length = 596 Score = 306 bits (783), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 190/597 (31%), Positives = 309/597 (51%), Gaps = 77/597 (12%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 + R +D +HG ++N AMI S+ G+ P +AE ++A + D+ IAG GFIN +L Sbjct: 32 LTRTKDRSHGDFASNIAMIGSKAAGMKPRDLAEKVLAALPEVVDISKAEIAGPGFINFFL 91 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + IL I +GR+ K+ +EFVSANPT +HVGH R A G T+A L Sbjct: 92 NADQRFAILDQIQAQKEIFGRSQANAAKKIQVEFVSANPTSSLHVGHGRGAAYGMTVAKL 151 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + +G +V REYY+NDAG Q++ LA S + RY + L N P+ Y G Y+K + + + Sbjct: 152 LEATGAKVDREYYVNDAGRQMDILATSTYLRYLELLGQNLV-FPKNAYQGDYVKEIAQTI 210 Query: 214 ADK---------------------YSSEL--------LNFPEEKWLP------------- 231 DK Y+ EL L+ +EK + Sbjct: 211 IDKDGDAYLREVADVYKDVPEDVQYAEELDSDGNKVVLSGDKEKHIDGLIANSQQLLGEG 270 Query: 232 --IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 + ++ A++ I+DDL + + + SE + I + ++ L ++G++YE Sbjct: 271 YRVFHQAALHAILDDIKDDLADFGVTFNQWFSEASL----SAEIDEALETLDQRGFLYE- 325 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349 + F+ST GD+ DR + + +G TYFA+D+AY K +RG+ Sbjct: 326 ---------------KDGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGY 370 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 ++I + GSDH GY+ R++A A+ ++ VLL + V L+R G ++MS R+G F+T Sbjct: 371 TDLIDIWGSDHHGYISRVKAAIDAMGYDSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVT 430 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQA 468 LR + EVG+D+ RF + RK+ + +DFD QSK+N V+Y+QYA+AR CR + Sbjct: 431 LRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARICRML---E 487 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 K + L FD+ D +E +++ LA YP + A A EP+++ YL +L Sbjct: 488 KALSTGLQFDVNAARTHATRLSLD-AETEILAKLAAYPDAVLRAANAYEPHQVGNYLKEL 546 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A++FH ++ + V +++ +LT RL L V ++++GL ++GV +P+ M Sbjct: 547 AALFHAWYNEHK-------VLSDDAELTQARLLLSINVQQVLHNGLELLGVSAPDSM 596 >gi|227542588|ref|ZP_03972637.1| arginyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866] gi|227181786|gb|EEI62758.1| arginyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866] Length = 549 Score = 306 bits (783), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 185/557 (33%), Positives = 292/557 (52%), Gaps = 34/557 (6%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 + + +ERPR+ HG +TN A+ +++ G++P + + + + DP ++S IAG GFI Sbjct: 26 EEVTVERPRNPEHGDYATNLALQVAKKAGMNPRELGQKLADALSEDPAIESAEIAGPGFI 85 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 NL L+ + +I++ ++ G ++G + + GTK+N+EFVSANPTGP+H+G R A VGD+ Sbjct: 86 NLRLNSAAQGEIVARVLELGEKFGFSDVLSGTKINLEFVSANPTGPIHLGGTRWAAVGDS 145 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 L ++ FSG EVTREYY ND G QI+ A S+ + PE Y G Y+K + Sbjct: 146 LGRVLEFSGAEVTREYYFNDHGGQIDRFARSLVAAAKG------EPTPEDGYGGDYIKDI 199 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 + + + L EE + + V+ M I+ L D+F E+ + Sbjct: 200 AAAVVQEVPTALEGSDEEVQ-ETFRAHGVEMMFDHIKKSLAEFGTHFDVFFHENSLF--E 256 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + ++ L G +YE +ST GDD DR ++KSDG Sbjct: 257 SGAVEKAVEKLKSSGELYEA----------------DGAWWLKSTDYGDDKDRVVIKSDG 300 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 + Y A D+AY K++RG D IY++G+DH GY+ RL+A AAA+ ++ V++ ++V Sbjct: 301 NAAYIAGDIAYVANKFDRGHDLAIYMLGADHHGYIARLKAAAAALGYDADRVEVMIGQMV 360 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 L RDG +KMSKRAG ITL +V+ +G D+ R+ ++ LD D QS +N Sbjct: 361 NLLRDGKAVKMSKRAGTVITLDDLVEAIGIDAARYSLIRSSVDSTLDIDLDLWAAQSSDN 420 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 PV+YVQY +AR S+ R+A+ I + D D +++ E E D LI L E+P V Sbjct: 421 PVYYVQYGHARLCSLARKAEGIGNGVTDTDSADLSLLTHEREGD-----LIRTLGEFPSV 475 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 + +A +EP+++A Y LA+ FH + P + + R L A Sbjct: 476 VASAAELREPHRIARYAEQLAATFHRFYDTCHVLPGQ---DEEVEPIHVARFALAMATRQ 532 Query: 569 IINSGLNIIGVESPNEM 585 + + L ++GV +P M Sbjct: 533 TLANALGLVGVTAPERM 549 >gi|227487946|ref|ZP_03918262.1| arginyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867] gi|227092037|gb|EEI27349.1| arginyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867] Length = 549 Score = 306 bits (783), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 185/557 (33%), Positives = 292/557 (52%), Gaps = 34/557 (6%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 + + +ERPR+ HG +TN A+ +++ G++P + + + + DP ++S IAG GFI Sbjct: 26 EEVTVERPRNPEHGDYATNLALQVAKKAGMNPRELGQKLADALSEDPAIESAEIAGPGFI 85 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 NL L+ + +I++ ++ G ++G + + GTK+N+EFVSANPTGP+H+G R A VGD+ Sbjct: 86 NLRLNSAAQGEIVARVLELGEKFGFSDVLSGTKINLEFVSANPTGPIHLGGTRWAAVGDS 145 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 L ++ FSG EVTREYY ND G QI+ A S+ + PE Y G Y+K + Sbjct: 146 LGRVLEFSGAEVTREYYFNDHGGQIDRFARSLVAAAKG------EPTPEDGYGGDYIKDI 199 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 + + + L EE + + V+ M I+ L D+F E+ + Sbjct: 200 AAAVVKEVPTALKGSDEEVQ-ETFRAHGVEMMFDHIKKSLAEFGTHFDVFFHENSLF--E 256 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + ++ L G +YE +ST GDD DR ++KSDG Sbjct: 257 SGAVEKAVEKLKSSGELYEA----------------DGAWWLKSTDYGDDKDRVVIKSDG 300 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 + Y A D+AY K++RG D IY++G+DH GY+ RL+A AAA+ ++ V++ ++V Sbjct: 301 NAAYIAGDIAYVANKFDRGHDLAIYMLGADHHGYIARLKAAAAALGYDADRVEVMIGQMV 360 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 L RDG +KMSKRAG ITL +V+ +G D+ R+ ++ LD D QS +N Sbjct: 361 NLLRDGKAVKMSKRAGTVITLDDLVEAIGIDAARYSLIRSSVDSTLDIDLDLWAAQSSDN 420 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 PV+YVQY +AR S+ R+A+ I + D D +++ E E D LI L E+P V Sbjct: 421 PVYYVQYGHARLCSLARKAEGIGNGVTDTDSADLSLLTHEREGD-----LIRTLGEFPSV 475 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 + +A +EP+++A Y LA+ FH + P + + R L A Sbjct: 476 VASAAELREPHRIARYAEQLAATFHRFYDTCHVLPGQ---DEEVEPIHVARFALAMATRQ 532 Query: 569 IINSGLNIIGVESPNEM 585 + + L ++GV +P M Sbjct: 533 TLANALGLVGVTAPERM 549 >gi|302872432|ref|YP_003841068.1| arginyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47] gi|302575291|gb|ADL43082.1| arginyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47] Length = 561 Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 197/558 (35%), Positives = 312/558 (55%), Gaps = 36/558 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90 I+IE+P++ +HG +TN A+ L++ L +P IA+ I+ I + ++ V +AG GFIN Sbjct: 36 IMIEKPKEKSHGDFATNIALELTKKLRKNPREIAQHILNCIDLSETFIERVEVAGPGFIN 95 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + +L K + I+ G YG+ IG G KV +EFVSANPTGPMH+G+ R +GD L Sbjct: 96 FFFKKEWLYKAVEVILSEGNNYGKVNIGNGKKVMVEFVSANPTGPMHMGNARGGALGDCL 155 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+L+ ++GY VT+E+Y+NDAG QI S+ RY+Q L + DLPE Y G + Sbjct: 156 ANLLKWAGYNVTKEFYVNDAGNQIEKFGQSLEIRYRQ-LKGENIDLPEDCYHGEDIIERV 214 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 KE D++ +L N ++ + D++++ + ++++ L+ I++D++ E + + Sbjct: 215 KEYLDEHGDDLENLSSDERRKKLVDFALKRNILLMKEHLRKYGIEYDVWFHESSLY--ES 272 Query: 271 SPIRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 + + I++L +GY YE G L SK + D L++++ Sbjct: 273 GEVFETIEDLKSRGYTYEKDGALWFVASKIDKSLK-----------------DEVLIRAN 315 Query: 329 GSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387 G TYFAAD+AY + K+E RGFD +I + G+DH G+V R++A A+ ++ V+L + Sbjct: 316 GIPTYFAADIAYHRNKFEKRGFDIVIDIWGADHHGHVARMKAAMKALGIDPERLIVILMQ 375 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 LVRL R ++MSKR G ITL ++DE+G D+ RFM + ++ D V +Q+ Sbjct: 376 LVRLVRGKEVVRMSKRTGKAITLIDLIDEIGKDAARFMFNTKSADTHIEIDLDLVTQQTL 435 Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 +NPVFYVQYA+AR I R + LD ++ I E EL+L+ L E P Sbjct: 436 DNPVFYVQYAHARTCGIIRALSEEGIVLD-----KSKIKVELLQQEEELELLKKLLELPE 490 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 IE A + ++ YL DLAS+FH ++ R V+ N +L RL LV V Sbjct: 491 EIEIAAKNLDVSRVTKYLLDLASMFHAFYNACR-------VKNENEELMFTRLSLVECVR 543 Query: 568 SIINSGLNIIGVESPNEM 585 +IN+ L ++GV++P +M Sbjct: 544 IVINNMLRLLGVDAPEKM 561 >gi|325679007|ref|ZP_08158605.1| arginine--tRNA ligase [Ruminococcus albus 8] gi|324109511|gb|EGC03729.1| arginine--tRNA ligase [Ruminococcus albus 8] Length = 589 Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 186/580 (32%), Positives = 298/580 (51%), Gaps = 57/580 (9%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSVFIAGKGFINLY 92 IE P D +G +STNAAM+ ++P P IAE IV +I + + V IAG GFIN + Sbjct: 39 IEIPADSKNGDVSTNAAMVCAKPFRNAPRKIAEAIVGKIVTEGSCFEKVEIAGPGFINFF 98 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 + + ++ +++ +G +YG+ GKG + +EFVSANPTGPMH+G+ R +GD LA+ Sbjct: 99 YNKGWYASVVKAVLDAGADYGKTEFGKGKRALVEFVSANPTGPMHIGNARGGAIGDCLAA 158 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ---------------------ALYN 191 +M ++GYEV RE+YINDAG QI S+ RY Q +Y Sbjct: 159 VMEYAGYEVEREFYINDAGNQIEKFGKSLRLRYMQICSEAGQAIVAKNLDLDAFCKEIYG 218 Query: 192 NDSD-----LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 D + +P+ Y G+ + K D+Y PEE + DY++ ++ + Sbjct: 219 EDGNRPEFPMPDDVYLGMDIIAHAKNFFDEYGMIASAQPEEDCKKALVDYALPKNIQGLH 278 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 DDL I++D + E H + + +I+ L GY YE Sbjct: 279 DDLAKYRIEYDTWFRESTLH--NDGSVAKVIEQLKASGYTYE----------------QD 320 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVK 365 L F++T GD+ DR L++ +G TYF D+AY K ER FD I + G+DH GY+ Sbjct: 321 GALWFKTTEFGDEKDRVLVRDNGIPTYFVPDIAYHYNKLAERKFDKAIDIFGADHHGYIP 380 Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425 RL+A A+ ++++++ ++VRL ++G K+SKR+G ITL +++E+ D+ RF Sbjct: 381 RLKAAMTALGVDAKKLDIVIMQMVRLVKNGETYKLSKRSGKAITLNTLLEEIPIDAARFF 440 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 R+ + DFD S +NPV+YVQYA+AR S+ ++ K+ ++ F + Sbjct: 441 FNLREPNSQFDFDLDLAISNSSQNPVYYVQYAHARICSVIKKLKE--EGVEAKAFTDEM- 497 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 E+ + EL+L+ +A P I +A A +P K+ Y D+A+++H ++ R Sbjct: 498 -AEALNTSEELELVKLMATLPTTINDAAKAYDPAKVTKYAVDIATLYHKFYNACR----- 551 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + RL L AV II + L ++ + P M Sbjct: 552 --IKGEPENVMQARLSLSLAVKQIIANILGMLKINCPESM 589 >gi|326382074|ref|ZP_08203767.1| arginyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395] gi|326199500|gb|EGD56681.1| arginyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395] Length = 550 Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 188/559 (33%), Positives = 293/559 (52%), Gaps = 37/559 (6%) Query: 28 ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87 I + +V+ERPR HG +TN A+ L + G++P +A + DP +DS IAG G Sbjct: 28 IPETVVVERPRSPEHGDYATNIALQLGKRAGVNPRELATWLADEFASDPGIDSAEIAGPG 87 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 F+NL L+ + + ++S++ G +YGR VN+EFVSANPTGP+H+G R A VG Sbjct: 88 FVNLRLAAAAQNQTVASVLDRGADYGRGDELSTLNVNLEFVSANPTGPIHLGGTRWAAVG 147 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D L ++A G +VTREYY ND G QIN A S+ + PE Y G Y+ Sbjct: 148 DALGRVLAARGAQVTREYYFNDHGEQINRFANSLMAAAKG------EPTPEDGYAGEYID 201 Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD-FH 266 + + K +L+ P + + V+ M I+ L D++ E+ F Sbjct: 202 DIAGTVVAKVPG-ILDLPVDDAREAFRAEGVELMFAHIKRTLHEFGTDFDVYTHENSMFD 260 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 RG + + I L G +YE RST GDD DR ++K Sbjct: 261 RG---LVDESIAELKANGNLYEA----------------DGAWWLRSTNYGDDKDRVVIK 301 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386 SDG+ Y A D+AY K K++RG +++IY++G+DH GYV RL+A AAA+ + VL+ Sbjct: 302 SDGNAAYIAGDIAYLKDKHDRGANHLIYMLGADHHGYVVRLKAAAAALGYDADAVEVLIG 361 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446 ++V L +DG P++MSKRAG I L +V+ VG D+ R+ ++ +D D +++QS Sbjct: 362 QMVNLVKDGQPVRMSKRAGTVIALDDLVEAVGVDAARYALIRSSIDVNIDIDLDLLRKQS 421 Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 +NPV+YVQYA+AR ++ R A ++ L + ++ E+E D LI + ++ Sbjct: 422 ADNPVYYVQYAHARLSALARHAAELGLSLSTEHL--ELLDDEAEGD-----LIRTIGDFS 474 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 V+ A +EP++++ YL LA +H ++ R P+ + RL L A Sbjct: 475 EVVATAATLREPHRVSRYLESLAGAYHRFYARCRVLPQ---GDEEPGDVHAARLALCAAT 531 Query: 567 ASIINSGLNIIGVESPNEM 585 ++ +GL ++GV +P M Sbjct: 532 RQVLANGLALVGVSAPERM 550 >gi|257784334|ref|YP_003179551.1| arginyl-tRNA synthetase [Atopobium parvulum DSM 20469] gi|257472841|gb|ACV50960.1| arginyl-tRNA synthetase [Atopobium parvulum DSM 20469] Length = 614 Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 193/625 (30%), Positives = 315/625 (50%), Gaps = 69/625 (11%) Query: 11 LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 ++ L E ++ + +D + +ERP+D ++G S+ AM ++ P IA +VA Sbjct: 9 VRQALAEAQAAGELPEFQIDDVGLERPQDSSNGDWSSTVAMRSAKLAHKAPRDIAAALVA 68 Query: 71 RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130 I D ++ V +AG GF+N YLS + +I +++ G ++GR+ G G KV +E+VSA Sbjct: 69 HIVKDAQIERVEVAGPGFVNFYLSTAAGNEIFNTVRKQGADFGRSSFGSGQKVQVEYVSA 128 Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL- 189 NP GP+H+GH R A +GD+L+ ++AF+GYEV REYY+ND G+Q++ S+ RY Q + Sbjct: 129 NPVGPLHIGHGRWAALGDSLSRILAFAGYEVEREYYVNDHGSQMDVFGHSISKRYLQLID 188 Query: 190 ------------------------YNNDSDLPEGY--------------YPGVYLKHVGK 211 + D PE + Y G Y+ +G Sbjct: 189 IMQKRGIDADTAAQVLAEDRNAYVADEDDAHPEEHPFTDEFINSLGGNAYAGDYIVDLGL 248 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 N E++ + ++ + M++ I+ D++ SE + D Sbjct: 249 FFLKNDGELWANKSEDERMVEFRERGYKMMLESIKKTCHNARADFDVWFSERSLYVKDSQ 308 Query: 272 ---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 + +D L + GY+Y D L FRST GDD DR L+K++ Sbjct: 309 GKDAVDRALDALDKLGYLYRS---------------DEGALFFRSTDFGDDKDRVLIKTN 353 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 G YTYFA+D+AY K++R D++I + G+DH GY++R+ + A A+ Q VLL +L Sbjct: 354 GEYTYFASDVAYHWNKFQR-VDHVIDIWGADHHGYIQRVRSAATALG-YPTQFEVLLGQL 411 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V L R+G+ ++MSKR G I ++ EVG D+ R+ ++ + +++++DFD +VK Q Sbjct: 412 VNLLRNGVAVRMSKRKGTGIHFDELLAEVGVDATRYTLVSKSSNQMIDFDIEQVKRQDSS 471 Query: 449 NPVFYVQYAYARCRSIFRQAKDI----FPDLDFDLFPRNVIPQESEF----DTSELQLIV 500 NPV+YVQYA+AR SI R+A I L D I + D +E L Sbjct: 472 NPVYYVQYAHARICSILRRAAGIDLEEAKTLGMDAVASKAIGSVVDLGLLSDAAEQALAR 531 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 L E+P +IE+ + P+++ Y+ +LA FH ++ + P + + +L+ RL Sbjct: 532 KLFEFPGLIESCARDRAPFRITHYIEELAGQFHAFYTVCQVLPSEG--RPLDTELSKARL 589 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 A ++ LN+IGV +P M Sbjct: 590 AACDATRRVLAIALNLIGVSAPEVM 614 >gi|146296397|ref|YP_001180168.1| arginyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409973|gb|ABP66977.1| arginyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 562 Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 192/557 (34%), Positives = 316/557 (56%), Gaps = 34/557 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFIN 90 I+IE+P++ AHG +TN AM L+R L +P IA+ IV I + + ++ V +AG GFIN Sbjct: 37 IMIEKPKEKAHGDFATNIAMELTRKLKKNPREIAQNIVDNIDLTNTLIEKVEVAGPGFIN 96 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + +L K++ I+ G YGR IG G KV +EFVSANPTGPMH+G+ R +GD L Sbjct: 97 FFFKKEWLYKVVDVILSEGDGYGRVDIGNGKKVMVEFVSANPTGPMHMGNARGGALGDCL 156 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+L+ ++GY+VT+E+Y+NDAG QI S+ RY+Q L + +LPE Y G + Sbjct: 157 ANLLKWAGYKVTKEFYVNDAGNQIEKFGQSLEIRYRQ-LKGENIELPEDCYHGDDIIERV 215 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 KE ++ +L P E+ + +++++ + ++++ L+ I++D++ E + + Sbjct: 216 KEYLNENGDDLEGLPSEERRRKLVEFALKRNIALMKEHLQKYGIEYDVWFHESSLY--ES 273 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV-DRPLLKSDG 329 + + I++L R G+ YE + F ++ + +++ D L++++G Sbjct: 274 GEVYETIEDLKRHGFTYE----------------KDGAVWFAASKLDENLKDEVLIRTNG 317 Query: 330 SYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 TYFAAD+AY + K+E RGFD +I + G+DH G+V R++A A+ ++ ++L +L Sbjct: 318 IPTYFAADIAYHRNKFEKRGFDIVIDIWGADHHGHVPRMKAAMKALGIDPERLVIILMQL 377 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 VRL R ++MSKR G ITL +++E+G D+ RFM + ++ D V +Q+ + Sbjct: 378 VRLVRGKEIVRMSKRTGKAITLIDLIEEIGKDAARFMFNTKSADTHIEIDLDLVTQQTLD 437 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 NPVFYVQYA+AR I R + + + R+ I E EL+L+ L E P Sbjct: 438 NPVFYVQYAHARTCGILRALSE-----EGIVLNRDKIKLELLQQEEELELLKKLLELPEE 492 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 IE A + ++ YL DLAS+FH ++ R V+ + +L RL LV V Sbjct: 493 IEIAARNLDVSRVTKYLLDLASIFHAFYNACR-------VKNESEELMHTRLSLVECVRI 545 Query: 569 IINSGLNIIGVESPNEM 585 +I + L ++GV++P +M Sbjct: 546 VIKNVLTLLGVDAPEKM 562 >gi|125974436|ref|YP_001038346.1| arginyl-tRNA synthetase [Clostridium thermocellum ATCC 27405] gi|256005211|ref|ZP_05430179.1| arginyl-tRNA synthetase [Clostridium thermocellum DSM 2360] gi|281418961|ref|ZP_06249979.1| arginyl-tRNA synthetase [Clostridium thermocellum JW20] gi|166232780|sp|A3DGS4|SYR_CLOTH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|125714661|gb|ABN53153.1| arginyl-tRNA synthetase [Clostridium thermocellum ATCC 27405] gi|255990865|gb|EEU00979.1| arginyl-tRNA synthetase [Clostridium thermocellum DSM 2360] gi|281407418|gb|EFB37678.1| arginyl-tRNA synthetase [Clostridium thermocellum JW20] gi|316941572|gb|ADU75606.1| arginyl-tRNA synthetase [Clostridium thermocellum DSM 1313] Length = 564 Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 185/561 (32%), Positives = 305/561 (54%), Gaps = 34/561 (6%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKG 87 +D + IE P++ HG STN AM ++ + P +AE+I+ + + +D V AG G Sbjct: 34 VDELFIEIPKEKGHGDFSTNIAMQAAKTVRKAPRQVAEIIIKNMDLSNTYIDRVEAAGPG 93 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FIN +L+ ++L +L I YG IG+G KV +EFVSANPTGP+H+G+ R +G Sbjct: 94 FINFFLTNAWLYDVLKVIQKEKENYGNLDIGRGQKVMVEFVSANPTGPLHMGNARGGALG 153 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYL 206 D +AS++ +GY+VTRE+YINDAG QI +S+ RY Q L D+ + PE Y G + Sbjct: 154 DCIASVLEKAGYDVTREFYINDAGNQIEKFGISLEARYIQLLKGEDAVEFPEDGYHGEDI 213 Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 K ++ LL E+ + +Y++ ++ IR L+ + D++ SE + Sbjct: 214 IDHMKAYIEENGDNLLYVDSEERRKTLVEYALPKNIERIRKSLENYGVVFDVWFSEQSLY 273 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 D +R+ +D L +GY +E + F+++ +G + D +++ Sbjct: 274 --DNGEVRETLDILKEKGYTFE----------------KDGAVWFKASALGAEKDEVIVR 315 Query: 327 SDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 ++G TYFAAD+AY + K+ +R FD +I ++G+DH G+ R++ A ++++++ Sbjct: 316 NNGIPTYFAADIAYHRNKFLKRKFDRVINLLGADHHGHAARMKCALKAFDIDPDKLDIVI 375 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 +LVRLYR+G +MSKR G I+L +++EVG D+ RF + + LDFD ++ Sbjct: 376 FQLVRLYRNGEIARMSKRTGRAISLDDLLEEVGRDAARFFFNTKASGSHLDFDLDLAVKK 435 Query: 446 SKENPVFYVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 S ENPV+YVQYAYAR S+ R + + F D D V+ E++L+ L+E Sbjct: 436 SNENPVYYVQYAYARSCSMLRLLESEGFKVPDVDSVDLTVLKA-----PEEIELMKKLSE 490 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 YP I + EP +L Y+ D+AS FH ++ R V+ L R+ LV Sbjct: 491 YPEEIRISAQTLEPSRLTRYVLDVASNFHSFYNACR-------VKGEEENLMYARMILVD 543 Query: 565 AVASIINSGLNIIGVESPNEM 585 + +I + L+++ + +P +M Sbjct: 544 STRLVIKNVLDVLSITAPEKM 564 >gi|310829664|ref|YP_003962021.1| arginyl-tRNA synthetase [Eubacterium limosum KIST612] gi|308741398|gb|ADO39058.1| arginyl-tRNA synthetase [Eubacterium limosum KIST612] Length = 563 Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 198/564 (35%), Positives = 291/564 (51%), Gaps = 40/564 (7%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKG 87 L I +E PR+ HG +TN AM L + P IAE IV + ID V++V IAG G Sbjct: 33 LPEIYLEVPREKEHGDYATNIAMQLPKQAHKAPRVIAESIVRHMNIDSSYVEAVEIAGPG 92 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FIN L ++ ++L I YG+ G K N+EF+SANPTGPMH+G+ R +G Sbjct: 93 FINFKLKSDWVYEVLLEIEAMQENYGKTQGNAGKKYNLEFISANPTGPMHMGNARGGAIG 152 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D LA++ ++GY+VTRE+Y+NDAG QI S+ R++Q L D PE Y G ++ Sbjct: 153 DILAAIAEWTGYDVTREFYVNDAGNQIAKFGDSLDARFRQ-LMGEDIPFPEDGYQGNDIR 211 Query: 208 HVGKELADKYSS-----ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262 +E D+ + L E + I DY+++ +K + DL+ I +DI+ SE Sbjct: 212 VHMEEFIDQEGGADACQKYLTMDEAERKGIFVDYALEKNLKKMHADLEKYGIHYDIWFSE 271 Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322 + D I + L G VYE L F ++ G + D Sbjct: 272 QSLY--DQGAIESALKILQDSGAVYE----------------KEGALWFTTSEFGCEKDD 313 Query: 323 PLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381 L++ +G TYF D+AY K++ RGFD I V G+DH G++ RL+A A + Sbjct: 314 VLVRQNGLPTYFMGDIAYHLNKFKTRGFDRCINVWGADHHGHIARLKAAMQAAGVNPDHL 373 Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441 +++ +LVRL RDG +MSKR G+ ITL +++EVG D+ RF+ R LDFD Sbjct: 374 EIVIMQLVRLMRDGEIARMSKRKGEMITLTDLIEEVGRDAARFLFNMRSPDSHLDFDLDL 433 Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501 EQS ENPVFYVQYA+AR SI RQ + D + + + +E E EL L+ Sbjct: 434 AIEQSNENPVFYVQYAHARICSILRQMAE---DKNTEGPANLTLLREKE----ELTLLDM 486 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 L+ P I A +P ++ Y DLA+ FH ++ R V+ + +L RL Sbjct: 487 LSNLPNEIIVAEEKMDPSRITHYAMDLAAAFHSFYNACR-------VRVEDIELMKARLA 539 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 L+ ++ + L I+G+++P M Sbjct: 540 LIKGTKQVLANVLEILGIDAPERM 563 >gi|312135721|ref|YP_004003059.1| arginyl-tRNA synthetase [Caldicellulosiruptor owensensis OL] gi|311775772|gb|ADQ05259.1| arginyl-tRNA synthetase [Caldicellulosiruptor owensensis OL] Length = 561 Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 190/556 (34%), Positives = 309/556 (55%), Gaps = 32/556 (5%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90 I+IE+P++ +HG +TN AM L+R +P IA+ I+ I + ++ V +AG GFIN Sbjct: 36 IMIEKPKEKSHGDFATNIAMELTRKFKKNPREIAQNILDCIDLSGTFIEKVEVAGPGFIN 95 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + +L K++ I+ G YG+ +G G KV +EFVSANPTGPMH+G+ R +GD L Sbjct: 96 FFFRNDWLYKVVEVILSEGNNYGKVNVGNGKKVMVEFVSANPTGPMHMGNARGGALGDCL 155 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+L+ ++GY VT+E+Y+NDAG QI S+ RY+Q L + +LPE Y G + Sbjct: 156 ANLLKWAGYNVTKEFYVNDAGNQIEKFGQSLEIRYRQ-LKGENIELPEDCYHGEDIIERV 214 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 +E ++Y +L N ++ + +++++ + ++++ LK I++D++ E + + Sbjct: 215 REYLNEYGDDLENLSSDERRKKLVEFALKRNISLMKEHLKKYGIEYDVWFHESSLY--ES 272 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + + I++L +GY YE D S + G+ D L++++G Sbjct: 273 GEVFETIEDLKSRGYTYE---------------KDGALWFAASKIDGNLKDEVLIRANGI 317 Query: 331 YTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 TYFAAD+AY + K+E RGFD +I + G+DH G+V R++A A+ ++ V+L +LV Sbjct: 318 PTYFAADIAYHRNKFEKRGFDIVIDIWGADHHGHVARMKAAMKALGIDPERLIVILMQLV 377 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 RL R ++MSKR G ITL ++DE+G D+ RFM + ++ D V +Q+ +N Sbjct: 378 RLVRGKEVVRMSKRTGKAITLIDLIDEIGKDAARFMFNTKSADTHIEIDLDLVTQQTLDN 437 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 PVFYVQYA+AR I R + LD N++ Q E +L+ L E P I Sbjct: 438 PVFYVQYAHARTCGIIRALSEEGIVLDRGRIKLNLLQQ-----EEEFELLKKLLELPEEI 492 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 E A + ++ YL DL+++FH ++ + V+ N L RL LV V + Sbjct: 493 EIAARNFDVSRVTKYLLDLSAIFHSFYNACK-------VKNENEDLMFTRLALVECVRIV 545 Query: 570 INSGLNIIGVESPNEM 585 I + L+++GVE+P M Sbjct: 546 IKNMLDLLGVEAPERM 561 >gi|237785875|ref|YP_002906580.1| arginyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385] gi|237758787|gb|ACR18037.1| Arginyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385] Length = 594 Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 184/558 (32%), Positives = 283/558 (50%), Gaps = 39/558 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + +ERPR+ HG +TN A+ +++ +G P +A + + + +++V +AG GF+N+ Sbjct: 72 VTVERPRNPEHGDYATNLALQIAKKVGTSPRELAGWLAEDLATNSAIETVDVAGPGFLNI 131 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+ + +I+ I+ G +G + +N+EFVSANPTGP+H+G R A VGD L Sbjct: 132 RLAAAAQGEIVGRILAEGERFGSSSELSDEVINLEFVSANPTGPIHLGGTRWAAVGDALG 191 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 + AF G +TREYY ND G QI+ A S+ AL PE Y G Y++ + Sbjct: 192 RIFAFRGASITREYYFNDHGRQIDRFARSLV---AAAL---GQPTPEDGYGGEYIQDIAS 245 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 + DK+ E P E+ + + V M I+ L D+F E+ + Sbjct: 246 SVVDKHP-EATQLPLEERQELFRKEGVDLMFAHIKRTLHEFGTDFDVFFHENSLF--ESG 302 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + I L G +YE RST GDD DR ++KSDG Sbjct: 303 AVDQAIQKLKDNGNLYEA----------------DGAWWLRSTSFGDDKDRVVIKSDGDA 346 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 Y A D+AY + K ERG + IY++G+DH GY+ RL+A A A+ Q+ VL+ ++V L Sbjct: 347 AYIAGDIAYIRDKIERGHNLCIYMLGADHHGYIARLKAAAQALGYDPTQVEVLIGQMVNL 406 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 RDG +KMSKRAG ITL +V+ +G D+ R+ ++ + LD D Q+ +NPV Sbjct: 407 VRDGKAVKMSKRAGTVITLDDLVELIGVDAARYALIRSSVDQTLDIDMDLWARQTNDNPV 466 Query: 452 FYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 FYVQYA+AR S+ R+A+ + D D+ L + E LI L E+P V Sbjct: 467 FYVQYAHARLCSLGRKAQAAGILVKDPDYSLL----------VNDYEGALIRTLGEFPSV 516 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK-LTMMRLQLVHAVA 567 + A +EP+++A Y+ +LA FH + + P+ + + RL L A Sbjct: 517 VGTAAELREPHRIARYMEELAGTFHRFYDSCQILPKKSEPTGDEAAPIVHARLALAQATR 576 Query: 568 SIINSGLNIIGVESPNEM 585 I + L+++GV +P M Sbjct: 577 QTIANALSLLGVSAPERM 594 >gi|300858249|ref|YP_003783232.1| arginyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41] gi|300685703|gb|ADK28625.1| Arginyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41] gi|302205970|gb|ADL10312.1| arginyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231] gi|302330523|gb|ADL20717.1| arginyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002] gi|308276205|gb|ADO26104.1| arginyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19] Length = 550 Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 193/585 (32%), Positives = 303/585 (51%), Gaps = 42/585 (7%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD S +K I ++ +L + +V+ERPR+ HG +TN A+ +++ +G++P Sbjct: 4 ADLSHLIKRTATTILESRGLDASVLPETVVVERPRNPEHGDYATNVALQVAKKVGMNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 + +L+V + +D V IAG GFIN+ L+ + +I++ I+ +G +G + + G++V Sbjct: 64 LGQLLVDALALDEAVAEAGIAGPGFINIRLAAAAQGEIVAKILAAGEAFGHSDLYAGSRV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++ SG EVTREYY ND G QI+ S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAEVTREYYFNDHGRQIDRFTNSLV- 182 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 A D PE Y G Y+ + + + + L P E L + V+ M Sbjct: 183 ----AAAKGDP-TPEDGYGGDYINDIAEAVVASHPDVLTQEPTE-MLETFRSVGVEMMFS 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I++ L D+F E+ + + I+ L G +Y Sbjct: 237 HIKESLHEFGTDFDVFFHENSLF--ESGAVDKAIERLKENGNLY---------------- 278 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 +S+ GDD DR ++KSDG Y A D+AY K+ERG + IY++G+DH GY Sbjct: 279 FQDGAWWLKSSDYGDDKDRVVIKSDGDAAYIAGDIAYVADKFERGHNLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL A AAA+ + + VL+ ++V L RDG ++MSKRAG ITL +V+ +G D R Sbjct: 339 ISRLRAAAAALGYEPNSVEVLIGQMVNLVRDGQAVRMSKRAGTVITLDDLVEAIGIDGAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLF 480 + M+ LD D + QS +NPV+YVQY +AR SI R+A D+ D +F L Sbjct: 399 YSMIRSSVDSSLDIDLALWQSQSSDNPVYYVQYGHARLCSIARKAGDLGITAIDPNFALL 458 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 + E LI L E+P V++ A +EP+++A Y +LA FH + + Sbjct: 459 THD----------REGDLIRTLGEFPAVVKAAAELREPHRVARYAEELAGTFHRFYDSCQ 508 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P+ + + + RL L +A ++ + L ++GV +P M Sbjct: 509 ILPK---AGESPQSVHTARLALANATRQVLANALGLVGVTAPERM 550 >gi|320354044|ref|YP_004195383.1| arginyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032] gi|320122546|gb|ADW18092.1| arginyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032] Length = 549 Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 191/555 (34%), Positives = 293/555 (52%), Gaps = 35/555 (6%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 R +E P+ G STN A++ + P +A + ++ V +AG GFIN Sbjct: 30 RYTVEVPKREGQGDFSTNFALVAAGIDKRKPRDLAAQFAELLGGQSMIERVEVAGPGFIN 89 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 L+L +L+ I +GR+ G +V +EFVSANPTGP+ VGH R AV+GDT+ Sbjct: 90 LFLDKKIWVTVLAPIYEQDAHFGRSTNGADRRVLVEFVSANPTGPLSVGHGRNAVLGDTI 149 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A L+ SGY V REYY NDAG Q+ L S RY + L ++ PE Y G Y+ + Sbjct: 150 ARLLTASGYAVQREYYFNDAGRQMRVLGESTRARYLELLGLANT-FPEDGYQGDYIYDIA 208 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 + + D+ ++ L + K+ + +A+ I LK + I D + +E + + Sbjct: 209 RAMIDEAGDGF----KDAELAVFKERAQRAIFADIDATLKRIGIGFDTYFNEHTLY--ED 262 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + +++ L + VYE K T F++T G + DR ++KS G Sbjct: 263 GRVNQVVEELRAKNLVYE------KEGAT----------WFKTTEFGQEQDRVIIKSSGE 306 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TY D+AY K++RG+D MI V GSDH V + A A+ ++I V+L + V Sbjct: 307 PTYRLPDIAYHCDKFKRGYDWMINVFGSDHIATVPDVLAGVRALGHDDSRITVVLYQFVT 366 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L RDG +KMS R F+T+ +VDEVG D++RF L RK L++FD K+QS+ENP Sbjct: 367 LLRDGKQVKMSTRKATFVTVDELVDEVGPDALRFFFLMRKPDNLIEFDLDLAKKQSQENP 426 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+YVQYA+AR SI RQA++ ++ P ++ + +E E L+ LAEYP+++ Sbjct: 427 VYYVQYAHARLCSIERQAREQGVNVG---TPDQILARLAE--PEEYGLLKTLAEYPQLVA 481 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A P+++ FYL DLA FHG ++ + V ++ +L+ RL L A+ + Sbjct: 482 GAAADLAPHRVVFYLMDLAGQFHGFYNKHK-------VLGDDPELSRARLYLCGALKRVF 534 Query: 571 NSGLNIIGVESPNEM 585 +GL +IG+ +P M Sbjct: 535 RNGLTLIGLRAPETM 549 >gi|88855307|ref|ZP_01129971.1| arginyl-tRNA synthetase [marine actinobacterium PHSC20C1] gi|88815214|gb|EAR25072.1| arginyl-tRNA synthetase [marine actinobacterium PHSC20C1] Length = 553 Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 184/562 (32%), Positives = 303/562 (53%), Gaps = 49/562 (8%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V+ERPR+ HG ++N AM L++ LG P +A I +++ + +V +AG GFIN+ Sbjct: 33 LVLERPRNRDHGDWASNVAMKLAKTLGASPRELATEIAEQVRTIDGIAAVDVAGPGFINI 92 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + + +IV G YG N G +N+EFVSANPTGP+H+GH R A +GD+LA Sbjct: 93 TLDAAAAGALAKTIVEQGDAYGSNDSLAGQTINLEFVSANPTGPLHIGHTRWAALGDSLA 152 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ +G E+ E+YINDAG Q++ S+ Q PE YPG Y+ + K Sbjct: 153 RILKTAGAELVSEFYINDAGNQMDNFGASILASAQG------EPTPENGYPGAYIAELAK 206 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD-- 269 E+ + ELL+ + + + ++ + + I+ L N+ D++ SE H + Sbjct: 207 EVLVSH-PELLDLEHDAAIAVARERGYELQLGAIKKSLADFNVHFDVWFSERSLHVANGE 265 Query: 270 -PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM-VGDDVDRPLLKS 327 S I + ++ L QG+V +DR ++ +T GDD DR + + Sbjct: 266 GASAIDEAVERLRAQGHV-----------------VDRDDAVWVTTTDFGDDKDRVIKRG 308 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK-KAQINVLLC 386 +G YTYFA+D AY+ K +RGF + IY++G+DH GYV RL+A+A A + I V++ Sbjct: 309 NGVYTYFASDAAYYLSKGDRGFAHKIYLLGADHHGYVHRLKALAGAAGDDPNKDIEVMIG 368 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446 +LV + ++SKRAG+ I L + + +G+D++R+ + L D +K+++ Sbjct: 369 QLVSIN----GARLSKRAGNIIELDDLREWLGTDALRYSLGRYPADSPLTLDPEILKKRT 424 Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 +NPVFYVQYA+AR S+ R A + +D +F +++ E+E L+ LAE+P Sbjct: 425 NDNPVFYVQYAHARTHSVARNAGE--SGVDRSVFDASLLTNETES-----ILLGVLAEFP 477 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT---MMRLQLV 563 R++ A +EP+++A Y +LA +H + R P N+ + T RL + Sbjct: 478 RIVAQAAELREPHRVARYAEELAGSYHRWYDQCRVTP------MNDEEATDVHRTRLWVN 531 Query: 564 HAVASIINSGLNIIGVESPNEM 585 AV ++ +GL ++GV +P M Sbjct: 532 DAVGQVLRNGLWMLGVSAPERM 553 >gi|229815551|ref|ZP_04445878.1| hypothetical protein COLINT_02601 [Collinsella intestinalis DSM 13280] gi|229808781|gb|EEP44556.1| hypothetical protein COLINT_02601 [Collinsella intestinalis DSM 13280] Length = 622 Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 196/614 (31%), Positives = 314/614 (51%), Gaps = 80/614 (13%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 L+ +ERP D +HG ++ AM ++ P IA+ IVA + ++ V +AG GF Sbjct: 32 LEDCGMERPADTSHGEWTSTCAMKSAKLAHCAPKKIADAIVAHMPESAEIAKVEVAGPGF 91 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 IN YL+ + IL G+++ ++ IG+G K +EFVSANP GPMHVGH R A +GD Sbjct: 92 INFYLNAAANNAILDVARKEGMDFAKSNIGQGLKTQVEFVSANPVGPMHVGHGRWAALGD 151 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL------------------- 189 +L +M+ +GY++ RE+YIND G+Q++ S+ +RY Q + Sbjct: 152 SLCRVMSHAGYDIQREFYINDHGSQMDVFGNSISYRYMQLIEIMEKEGLDIDGARDFLAQ 211 Query: 190 -----YNNDSD-----------LPEGY----YPGVYLKHVG----KELADKYS-----SE 220 +++D EG Y G Y+ K+ DK++ Sbjct: 212 DRDNFVQDEADEHLDSHPYMDAFTEGLGGNAYGGTYIIDEAAAFYKKDGDKWAHVTDEER 271 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280 +L F EE + +V++ ++ + +R D + ++I + + S + L Sbjct: 272 MLYFREEGYAKMVEN--MRQLCHDVRCDFDKWFSERTVYIKDTEGEHAGTSAVDRAFAKL 329 Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340 GY+Y L FRST +GDD DR L+K++G YTYFA+D+AY Sbjct: 330 DEMGYLYN----------------KDGALWFRSTDLGDDKDRVLVKANGEYTYFASDVAY 373 Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400 K++R D++I + G DH GY+ R+ V A+ Q VLL + V L R+G PI+M Sbjct: 374 HWDKFQR-VDHVIDIWGCDHHGYINRVRCVCDALG-YPGQFEVLLGQFVNLLRNGKPIRM 431 Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460 SKR G +T + +VDEVG+D+ R+ ++ R +++ +DFD VKE+S+ NPV+YVQYA+AR Sbjct: 432 SKRKGTMVTFQELVDEVGADATRYTLISRSSNQAIDFDIEAVKEKSQNNPVYYVQYAHAR 491 Query: 461 CRSIFRQAKDIFP----DLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENA 512 SI R+A + P ++ D I + ++ D +EL L ++E +I + Sbjct: 492 ICSILRKAAGVTPEEAAEMGMDAVAAKAIGENVDYALLTDPTELALSRKISELEDLIASC 551 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENP-RLRFVQANNRKLTMMRLQLVHAVASIIN 571 + P++L + +LA+ FH + + P R V A +L+ RL AV S++ Sbjct: 552 ARDRAPFRLTHFAEELAAGFHSFYQACQVLPSEGRPVDA---ELSRARLAACDAVRSVLE 608 Query: 572 SGLNIIGVESPNEM 585 L++IGV +P M Sbjct: 609 LVLSLIGVSAPTTM 622 >gi|332531547|ref|ZP_08407444.1| arginyl-tRNA synthetase [Hylemonella gracilis ATCC 19624] gi|332038910|gb|EGI75339.1| arginyl-tRNA synthetase [Hylemonella gracilis ATCC 19624] Length = 561 Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 198/575 (34%), Positives = 301/575 (52%), Gaps = 59/575 (10%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE----LIVARIKIDPDVDSVFIAGK 86 R E P+ HG L+T AAM +++PL P +AE ++A VD+V IAG Sbjct: 26 RAAFESPKLAEHGDLATTAAMQIAKPLKQPPRQVAEDLRRALLAMPAFSIWVDAVEIAGP 85 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GFIN+ L P+ ++I+ ++ +G YGR KG ++ +EFVSANPTGP+HVGH R A + Sbjct: 86 GFINIRLKPAAKQEIVREVLGAGERYGRQ-TPKGQRMMVEFVSANPTGPLHVGHGRQAAL 144 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206 GD +++L A G+EV RE+Y NDAG QI TLA+SV R + L D+ PE Y G Y+ Sbjct: 145 GDAISNLYATQGWEVYREFYYNDAGVQIQTLAVSVQAR-ARGLKPGDAGWPESAYNGDYI 203 Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM-------MKIIRD-DLKALNIQHDI 258 + AD + + + + + K + M ++ +D DL+A N++ D Sbjct: 204 ADIA---ADFMAGKTVQADDRSYTASGKVDDLDGMRLFAVAYLRHEQDLDLQAFNLRFDN 260 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + E + + ++ L G YE L RST GD Sbjct: 261 YYLESSLYTS--GRVDAAVEKLRAAGKTYE----------------QDGALWLRSTDYGD 302 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSE 376 D DR + K DG+YTYF D+AY K+ERGF ++ + G+DH G + R+ A AA V Sbjct: 303 DKDRVMRKGDGTYTYFVPDVAYHISKWERGFQKVVNIQGTDHHGTIARVRAGLQAAGVGI 362 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 + + +L +VR+ R G +K+SKRAG ++TLR +++ D+VRF +L RK Sbjct: 363 PQGYPDYVLHTMVRVVRGGEEVKISKRAGSYVTLRDLIEWTSKDAVRFFLLSRKPDTEYT 422 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIF-----RQAKDIFPDLDFDLFPRNVIPQESEF 491 FD +++ +NPV+YVQYA+AR S+ + D D DL + Sbjct: 423 FDVDLAVQKNNDNPVYYVQYAHARICSVLAAWREKDGGDPVTLRDADL---------TAL 473 Query: 492 DTSELQ-LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550 DTS L++ LA+YP ++ A P+ +AFYL DLAS +H ++ R + Sbjct: 474 DTSAAHTLMLKLAQYPDMLTGAARDFAPHDVAFYLRDLASSYHSYYDAER-------ILV 526 Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + RL LV A A ++ +GL ++GV +P +M Sbjct: 527 DDEAVKRARLALVAATAQVLRNGLAVLGVSAPEKM 561 >gi|303233374|ref|ZP_07320043.1| arginine--tRNA ligase [Atopobium vaginae PB189-T1-4] gi|302480503|gb|EFL43594.1| arginine--tRNA ligase [Atopobium vaginae PB189-T1-4] Length = 615 Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 197/607 (32%), Positives = 306/607 (50%), Gaps = 78/607 (12%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +ERP D +HG S+ AM +R + P IA+ IV + ++ V IAG GFIN YL Sbjct: 32 LERPADTSHGDWSSTIAMRSARLAHMAPAKIAQAIVDHMPETTEIAKVEIAGPGFINFYL 91 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 S S +++++ + +G +GKG K+N EF+SANPTGP+HVGH R A +GD++ ++ Sbjct: 92 STSASNDVINAVRSARDRWGACNMGKGFKINYEFISANPTGPLHVGHGRWAALGDSVCNV 151 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRY--------------QQALY--------- 190 + F GY+V REYYIND G+Q++ SV RY +QAL Sbjct: 152 LDFCGYDVFREYYINDHGSQMDVFGSSVSMRYAQLCSIIADKHLSAKQALELLLADRNAY 211 Query: 191 --NNDSDLPEGY--------------YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234 + + + PE + Y G Y+ + E + E++ + Sbjct: 212 VDDEEDEHPENHPYMDAFNEHLGGNSYGGDYIIEIAYEFYVQDGDSWAQVSEDERNAAFR 271 Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR---QGYVYEGIL 291 + + QAM+K I++ D++ SE ++ D S + AR GY+Y+ Sbjct: 272 ERAYQAMLKRIQNTCHTSRCDFDLWFSERSLYQKDESGTSKVDRAFARLEKMGYLYK--- 328 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351 D L F+ST GDD DR L+KS+G YTYFA+D+AY K++RG Sbjct: 329 ------------TDDGALWFKSTEFGDDKDRVLIKSNGEYTYFASDVAYHWDKFDRGAQQ 376 Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 I + G+DH GY+ R+ V A+ K I V L + V L R+G P++MSKR G IT Sbjct: 377 SIDLWGADHHGYIARVTNVCDALGFKGKFI-VDLGQFVNLLRNGEPVRMSKRKGTMITFE 435 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 ++ EVG D+ R+ ++ + +++ +DFD VKE+S NPVFYVQYA+AR SI R A + Sbjct: 436 ELLHEVGVDATRYTLISKSSNQTIDFDIEAVKEKSNSNPVFYVQYAHARICSILRNAAGV 495 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLA 522 + L V + D +L L+VH L+E+P ++ + + P+++ Sbjct: 496 TEEEAKTLGMDEVAARAVGNDV-DLSLLVHPMEAALSRKLSEFPELVASCARDRAPFRIT 554 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNR----KLTMMRLQLVHAVASIINSGLNIIG 578 ++ +LA FHG +++ + + + R L+ RL AV + L +IG Sbjct: 555 HFVEELAGAFHGFYAN------CQVLSSEGRPVDEALSHARLAACDAVRINLEVALKLIG 608 Query: 579 VESPNEM 585 V +P M Sbjct: 609 VSAPEVM 615 >gi|221194653|ref|ZP_03567710.1| arginyl-tRNA synthetase [Atopobium rimae ATCC 49626] gi|221185557|gb|EEE17947.1| arginyl-tRNA synthetase [Atopobium rimae ATCC 49626] Length = 613 Score = 303 bits (777), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 187/602 (31%), Positives = 304/602 (50%), Gaps = 70/602 (11%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +ERP D ++G ++ AM +R P IA +VA + P+++ V IAG GF+N YL Sbjct: 32 LERPADASNGDWTSTVAMRSARLAHKSPRDIAAALVAHMSDVPEIERVEIAGPGFVNFYL 91 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 S + +I +I G ++G++ GKGTK+ +E++SANP GP+HVGH R A +GD+L + Sbjct: 92 STAAGNEIFRTIREQGADFGKSDFGKGTKIQVEYISANPVGPLHVGHGRWAALGDSLCRV 151 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA------------------------- 188 +GY+V REYYIND G+Q++ S+ RY Q Sbjct: 152 FEHAGYDVEREYYINDHGSQMDVFGSSISKRYLQLNEIMAQKNVELQEAYQMLLDDREAF 211 Query: 189 LYNNDSDLPEGY--------------YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234 + + D PE + Y G Y+ + K ++ ++ E+ + + Sbjct: 212 IEDEDDSRPETHPYMDAFNESLGGNAYGGDYIIDLAKRFCEENGDAWVSASEDDRMADFR 271 Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGIL 291 + + M++ I+ D++ SE + D S + ++ L GY+Y Sbjct: 272 ERGYKLMLESIKATCHNARSDFDVWFSERSLYVPDENGKSAVDRALETLDGMGYLYH--- 328 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351 + L FRST GDD DR L+KS+G YTYFA+D+AY K++R D+ Sbjct: 329 -------------EDGALFFRSTKFGDDKDRVLIKSNGEYTYFASDVAYHWNKFQR-VDH 374 Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 +I + G+DH GY++R+++V A+ Q VLL + V L R+G P+KMSKR G I Sbjct: 375 VIDIWGADHHGYIQRVDSVCTALG-FPGQFEVLLGQFVNLLRNGTPVKMSKRKGTGIPFD 433 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 ++ EV D+ R+ ++ + +++++DFD +VK Q NPV+YVQYA+AR SI R+ + Sbjct: 434 ELLGEVSVDATRYTLMSKSSNQMIDFDIEQVKRQDSSNPVYYVQYAHARICSILRRGAGV 493 Query: 472 ----FPDLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 +L D I + + E L L+E+P ++EN + P+++ Sbjct: 494 SIEEAQELGMDEVASRAIGDSYDLSLLSENVEQALSRKLSEFPTLVENCARDRAPFRITH 553 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+ +LAS FHG ++ + P + + L+ RL A ++ LN+IGV +P Sbjct: 554 YVEELASDFHGFYTVCQVLPSES--RPLDEDLSRARLAACDATRRVLALALNLIGVSAPQ 611 Query: 584 EM 585 M Sbjct: 612 SM 613 >gi|300789616|ref|YP_003769907.1| arginyl-tRNA synthetase [Amycolatopsis mediterranei U32] gi|299799130|gb|ADJ49505.1| arginyl-tRNA synthetase [Amycolatopsis mediterranei U32] Length = 553 Score = 303 bits (776), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 189/560 (33%), Positives = 285/560 (50%), Gaps = 40/560 (7%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 +++ IERPR+ HG +TN A+ +++ GL P AE + A + D V S +AG GF+ Sbjct: 30 EQVTIERPRNPDHGDYATNLALQVAKKAGLKPRDFAEALAAAVSADDGVASAEVAGPGFL 89 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N L+ + I+ ++ +G YGR GT++N+EFVSANPTGP+H+G R A VGD Sbjct: 90 NFRLAAAAQGDIVRQVLDAGAAYGRGDALAGTRINLEFVSANPTGPIHLGGTRWAAVGDA 149 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 L ++A G +VTREYY NDAGAQI+ S+ + PE Y G Y+ + Sbjct: 150 LGRVLAAQGADVTREYYFNDAGAQIDRFVRSLIAAAKG------EPAPEDGYAGGYINDI 203 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 E+ K L+ PE + + + M I+ L D++ E+ H + Sbjct: 204 AAEVI-KAEPSALSLPEAERHETFRRIGINLMFSEIKQSLHDFGTDFDVYFHENSLH--E 260 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + + L G +Y D +S+ GDD DR ++K DG Sbjct: 261 SGAVDAAVQQLKDSGNLY----------------FDEGAWWLKSSEYGDDKDRVVIKQDG 304 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 + Y A DLAYFK K RGFD IY++G+DH GY RL+A AAA + A + VL+ ++V Sbjct: 305 NPAYIAGDLAYFKDKRNRGFDLCIYMLGADHHGYTARLKAAAAAFGDDPATVEVLIGQMV 364 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 L DG P++MSKRAG IT+ +V+ VG D R+ ++ LD D +++ S +N Sbjct: 365 NLVSDGKPVRMSKRAGTVITMEDLVEAVGVDPARYELIRYSVDSTLDVDLDLLRKHSNDN 424 Query: 450 PVFYVQYAYARCRSIFRQAKDI----FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 PV+YVQYA+AR ++ R A D+ D+D +P E + LI + E+ Sbjct: 425 PVYYVQYAHARLCTMLRGAADLGLKSTEDVDLGQL---TLPVEGD-------LIRTIGEF 474 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 P + A +EP+++A YL +LA H ++ RE L R+ L A Sbjct: 475 PETVRRAAEMREPHRIARYLEELAGALHKFYAV-REARVLPKGDEAATPANHARVALCEA 533 Query: 566 VASIINSGLNIIGVESPNEM 585 ++ +GL ++GV +P M Sbjct: 534 ARVVLANGLALVGVSAPERM 553 >gi|262371365|ref|ZP_06064683.1| arginyl-tRNA synthetase [Acinetobacter johnsonii SH046] gi|262313702|gb|EEY94751.1| arginyl-tRNA synthetase [Acinetobacter johnsonii SH046] Length = 601 Score = 303 bits (776), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 188/603 (31%), Positives = 309/603 (51%), Gaps = 82/603 (13%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 + R +D +HG ++N AMI S+ G+ P +AE I+A + D+ IAG GFIN + Sbjct: 31 TLTRTKDRSHGDFASNIAMIASKAAGMKPRDLAEKILAALPEVADISKAEIAGPGFINFF 90 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L+ +L I G ++GR K+ +EFVSANPT +HVGH R A G T+A+ Sbjct: 91 LNADQRFAVLDQIQAQGNQFGRTQANAAKKIQVEFVSANPTSSLHVGHGRGAAYGMTVAT 150 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 L+ +G V REYY+NDAG Q++ LA S + RY + L P+ Y G Y+K + + Sbjct: 151 LLEATGATVDREYYVNDAGRQMDILATSTYLRYLE-LTGQALVFPKNAYQGDYVKEIAQS 209 Query: 213 LAD---------------------KYSSEL--------LNFPEEKWLP------------ 231 + D +Y+ EL L+ +EK + Sbjct: 210 IIDADGYAYVRPVADVYKDVPEDVQYAEELDAEGNKVVLSGDKEKHIDGLIHNSQSLIGE 269 Query: 232 ---IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288 + ++ A++ I+DDL + + + SE I + ++ L ++G++YE Sbjct: 270 AYRVFHQAALNAILDDIKDDLGEFGVTFNQWFSEASL----TDKIDEALETLEQRGFLYE 325 Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348 + F+ST GD+ DR + + +G TYFA+D+AY K +RG Sbjct: 326 ----------------KDGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIAYHLNKLQRG 369 Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 + ++I + GSDH GY+ R++A A+ ++ VLL + V L+R G ++MS R+G F+ Sbjct: 370 YTDIIDIWGSDHHGYISRVKAAIDALGYDSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFV 429 Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 TLR + EVG+D+ RF + RK+ + +DFD QSK+N V+Y+QYA+AR + Sbjct: 430 TLRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHARVNRMV--- 486 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTS------ELQLIVHLAEYPRVIENATIAQEPYKLA 522 D+ F R+ + +++D + E +++ LA YP ++ A + EP+++ Sbjct: 487 -DVKAPEKGISFDRSKV---ADYDATLLVLDAETEILAKLAAYPEIVLRAANSYEPHQVG 542 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 YL +LA++FHG W + +N R+ + N L+ RL L V ++ +GL ++GV +P Sbjct: 543 NYLKELAALFHG-W-YNLDNTRI--IDEQNIALSQARLLLSINVQQVLRNGLELLGVSAP 598 Query: 583 NEM 585 M Sbjct: 599 EAM 601 >gi|222056007|ref|YP_002538369.1| arginyl-tRNA synthetase [Geobacter sp. FRC-32] gi|254782965|sp|B9M2S2|SYR_GEOSF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|221565296|gb|ACM21268.1| arginyl-tRNA synthetase [Geobacter sp. FRC-32] Length = 561 Score = 303 bits (776), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 196/570 (34%), Positives = 301/570 (52%), Gaps = 54/570 (9%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSVFIAGKGFIN 90 I+IE+P HG +TN AM+L++ P +AE +V+ + V + + IAG GFIN Sbjct: 30 IIIEKPAHADHGDFATNVAMLLAKAEKKAPRMVAETLVSHLADGSGVCEKIEIAGPGFIN 89 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +L R+ L + G EYG++ +G G K+ +EFVSANPTGP+H+GH R A +GDT+ Sbjct: 90 FHLKDEAWRQTLLEVDQIGFEYGKSGVGGGKKIQVEFVSANPTGPLHIGHGRGAALGDTI 149 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---DSDLPEGYYPGVYLK 207 L++ +G++VTRE+Y NDAG QI LALSV Q + N D P Y G Y+ Sbjct: 150 CRLLSATGWDVTREFYYNDAGQQIANLALSV----QARCFGNGPDDPGWPSDGYQGEYII 205 Query: 208 HVGKEL-------ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 V + AD P++ L ++ ++V + + DL A ++ D++ Sbjct: 206 DVARAYMARETVHADDQHVTAAGDPQD--LEAIRRFAVAFLRREQDQDLAAFDVHFDVYS 263 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 E D + D S + ++ L G+ YE L R+T DD Sbjct: 264 LESDLY-ADGS-VERVVRRLVDSGHTYE----------------QDDALWLRTTSFADDK 305 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--K 378 DR + KS G YTYF D+AY K+ERGF ++ G+DH + R+ A A+ Sbjct: 306 DRVMRKSGGGYTYFVPDVAYHLRKWERGFTRVVNEQGADHHSTITRVRAGLQALDAGIPA 365 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438 +L ++V + R G +K+SKRAG ++TLR ++DEVG D+ RF + RK L FD Sbjct: 366 GWPEYVLHQMVTVLRGGEEVKISKRAGSYVTLRDLIDEVGRDATRFFFVMRKPDSQLVFD 425 Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSE 495 K++S +NPV+YVQYA+AR SIF A + + P D + + P+ E Sbjct: 426 IDLAKQKSLDNPVYYVQYAHARICSIFENAAEKGFVVPGADGVNLDQLIEPE-------E 478 Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555 + ++ LA +P V+E + EP+++A YL +LA +FHG ++ R V + +L Sbjct: 479 MAIVKALAFFPEVVEGSAANFEPHRIANYLQELAGLFHGFYNKNR-------VITEDSQL 531 Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585 T RL L+ VA + + LN++G+ +P +M Sbjct: 532 TAARLFLLKCVALTLKNALNLLGISAPEKM 561 >gi|210632829|ref|ZP_03297562.1| hypothetical protein COLSTE_01466 [Collinsella stercoris DSM 13279] gi|210159388|gb|EEA90359.1| hypothetical protein COLSTE_01466 [Collinsella stercoris DSM 13279] Length = 619 Score = 303 bits (776), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 199/619 (32%), Positives = 312/619 (50%), Gaps = 93/619 (15%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 L+ +ERP D +HG ++ AM ++ P IA+ +VA + +++ V +AG GF Sbjct: 32 LEDCGMERPADTSHGEWTSTMAMKSAKLAHCAPRKIADAVVAHMPESAEIEHVEVAGPGF 91 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 IN YL+ + I G ++ ++ +G G K IEFVSANP GPMHVGH R A +GD Sbjct: 92 INFYLNAAANNAIFGVAREQGRDFAKSNVGGGVKTQIEFVSANPVGPMHVGHGRWAALGD 151 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL------------------- 189 ++ ++M +GYEV RE++IND G Q+NT S+ RY Q Sbjct: 152 SMCNVMQHAGYEVEREFWINDYGNQMNTFGNSISKRYMQLADIMAKQGCDIDAARDFLAQ 211 Query: 190 ----YNND----------------SDLPEGYYPGVYLKHVGKELADKYSSELLNF-PEEK 228 Y D +DL + Y G Y+ + ++ P+E+ Sbjct: 212 DRDNYVQDEADEHLDSHPYMDEFTADLGKDSYGGTYIIDEAAAFWKSDGDKWVDADPQER 271 Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGY 285 L ++ Q M+K ++D + D+++SE ++ D SP+ D L + GY Sbjct: 272 MLSF-RERGYQKMLKDMKDTCHDVRCDFDVWMSERTMYQKDWTGTSPVERAYDKLDKMGY 330 Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345 +Y TT+ L F+ST GDD DR + KS+G YTYF++D+AY K+ Sbjct: 331 LY----------TTED-----GALWFKSTAFGDDKDRVIKKSNGDYTYFSSDIAYHWNKF 375 Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405 +R D ++ + G+DH GY+ R++AV A+ Q V L + V L R G P++MSKR G Sbjct: 376 QR-VDLVLDIWGADHHGYIPRVKAVCDALG-YPGQFEVPLGQFVNLLRSGKPVRMSKRKG 433 Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 IT R ++DEVG+D+ R+ ++ R +++ +DFD VKE+S+ NPV+YVQYA+AR SI Sbjct: 434 TMITFRELIDEVGADAARYTLVSRSSNQTIDFDIDAVKEKSQSNPVYYVQYAHARICSIL 493 Query: 466 RQA------------------KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 R+A K I ++D+ L D +EL L ++E Sbjct: 494 RKAAGVTFEQAELMGMENVAVKAIGANVDYSLLT----------DPTELALARKISELED 543 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP-RLRFVQANNRKLTMMRLQLVHAV 566 +I + P++L Y +LA+ FH + + P R V+ ++T RL AV Sbjct: 544 LIAGCARDRAPFRLTHYAEELAAGFHSFYQACQVLPSEGRPVEP---EVTRARLAACDAV 600 Query: 567 ASIINSGLNIIGVESPNEM 585 S+++ L++IGV +P +M Sbjct: 601 RSVLDLVLSLIGVSAPTKM 619 >gi|315655913|ref|ZP_07908811.1| arginine--tRNA ligase [Mobiluncus curtisii ATCC 51333] gi|315489977|gb|EFU79604.1| arginine--tRNA ligase [Mobiluncus curtisii ATCC 51333] Length = 559 Score = 302 bits (774), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 180/566 (31%), Positives = 299/566 (52%), Gaps = 44/566 (7%) Query: 28 ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87 +++++ +ERP++ HG +TN A+ L + +G +P +AE+ + I V S +AG G Sbjct: 30 LVEKMRVERPKNRDHGDWATNIALQLGKSVGKNPRELAEIFASAIAQIDGVSSAEVAGPG 89 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FIN+ L +++ I+ SG +YG KG +N+E+VSANPTGP+H+G R A VG Sbjct: 90 FINIRLEAGAAGALVADILASGNDYGHGEGLKGVHINLEYVSANPTGPLHIGGARWAAVG 149 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D+LA L FSG +VTREYY ND G+QI+ A+S+ A N ++ PE Y G Y+ Sbjct: 150 DSLARLYKFSGAKVTREYYFNDHGSQIDRFAISLL----AAARNQET--PEDGYGGQYIA 203 Query: 208 HVGKELADKYSS----ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 + ++ + + + +E + + V+ M I++ L+ + D+F E+ Sbjct: 204 DIAAKVQAEAKTAGDPDPATLDDEAAQEYFRSHGVELMFDEIKESLRGFRTEFDVFFHEN 263 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323 + + + +D L +G V E K T +T GDD DR Sbjct: 264 SLY--ETGAVTKALDYLRERGEVIE------KDGAT----------WLLTTKHGDDKDRV 305 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QIN 382 ++KSDG+ +YFA+D+AY++ K RG D ++++G+DH GYV R+ A+ AA +K + Sbjct: 306 VIKSDGNASYFASDVAYYQDKRRRGADRAVFLLGADHHGYVGRMMAMCAAYGDKPGVNMQ 365 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 +++ +LV L++DG P++MSKRAGD +TL V+ VG D+ R+ ++ L D + Sbjct: 366 IIIGQLVNLFKDGEPVRMSKRAGDIVTLEDFVEAVGVDAARYALVRSSMDTQLAIDLDVL 425 Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 + ENPV+YVQYA+AR ++ + A P + D ++ LI L Sbjct: 426 ASHTNENPVYYVQYAHARTSNVAKNAAAHGVSCADGFAPAEL------RDPADAALIGVL 479 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR--- 559 A++P V+ A + + YL +L+ +H + R P A + +T Sbjct: 480 AQFPSVVATAAAENATHLVPRYLENLSGAYHTWYGKRRVTP------AGDEPVTAEHAAL 533 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L +AV ++ +GL+++GV +P M Sbjct: 534 LALNNAVGQVLRNGLDLLGVTAPERM 559 >gi|302335535|ref|YP_003800742.1| arginyl-tRNA synthetase [Olsenella uli DSM 7084] gi|301319375|gb|ADK67862.1| arginyl-tRNA synthetase [Olsenella uli DSM 7084] Length = 614 Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 190/603 (31%), Positives = 307/603 (50%), Gaps = 71/603 (11%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +ERP D ++G S+ AM +R + P IA+ IV + DP + V +AG GFIN YL Sbjct: 32 LERPADTSNGDWSSTVAMRSARLARMAPAKIAKAIVDNMPPDPAITRVEVAGPGFINFYL 91 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 S S ++ ++ +G ++G++ +G G KVN EF+SANPTGP+HVGH R A +GD++ ++ Sbjct: 92 STSAHNEVFRTVREAGSDWGKSNVGDGLKVNYEFISANPTGPLHVGHGRWAALGDSMCNV 151 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ------------------------AL 189 + ++VTREYYIND G+Q++ SV RY Q + Sbjct: 152 FEHTNHKVTREYYINDHGSQMDVFGRSVAMRYLQLDQAIKAEGFGLEDAVRLLLQDRESY 211 Query: 190 YNNDSD---------------LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234 +++ D L Y G Y+ + +E + + ++ E+ P + Sbjct: 212 VDDEQDEHPELHPYMDAFNEVLGGNSYGGDYIIQIAREFYEADGDKWVSAEPEERDPEFR 271 Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGIL 291 + + QAM++ I+ + D++ SE +R D S + L GY+Y+ Sbjct: 272 ERAYQAMLRRIKATCHTVRCDFDLWFSERSLYRKDTDGTSQVDRAFRRLDEMGYLYK--- 328 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351 D L F+ST GDD DR L+KS+G YTYFA+D+AY K++R + Sbjct: 329 ------------TDDGALWFKSTAFGDDKDRVLVKSNGEYTYFASDVAYHWNKFQRD-EY 375 Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 I + G+DH GY+ R+ V A+ + V L + V L RDG P++MSKR G ++ Sbjct: 376 SIDLWGADHHGYIARVTNVCDALG-YPGKFEVDLGQFVNLLRDGEPVRMSKRKGTMVSFD 434 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 ++ EVG D+ R+ ++ R +++ +DFD VK++ NPV+YVQYA+AR SI R+A + Sbjct: 435 ELIAEVGVDATRYTLISRSSNQTIDFDIEAVKQKDNANPVYYVQYAHARICSILRKAAGV 494 Query: 472 FPD----LDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 D + D + I + D +E L L+E+P ++ + P+++ Sbjct: 495 GEDEAVEMGMDEVAKRAIGPAYDLSLLTDATEASLARKLSEFPELVAGCARDRAPFRITH 554 Query: 524 YLYDLASVFHGHWSHGRENP-RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 + +LA+ FHG ++ + P R V A +L+ RL AV + L +IGV +P Sbjct: 555 FCEELAAAFHGFYASCQVLPSEGRPVDA---ELSRARLAACDAVRVNLEVALRLIGVSAP 611 Query: 583 NEM 585 + M Sbjct: 612 DVM 614 >gi|300781429|ref|ZP_07091283.1| arginine--tRNA ligase [Corynebacterium genitalium ATCC 33030] gi|300533136|gb|EFK54197.1| arginine--tRNA ligase [Corynebacterium genitalium ATCC 33030] Length = 591 Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 200/593 (33%), Positives = 303/593 (51%), Gaps = 52/593 (8%) Query: 5 ADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD ++ ++ E +D + + + +ERPR+ HG +TN A+ +++ G +P Sbjct: 39 ADLAATVRAITTETLDAHGLDSSVVPETVTVERPRNPEHGDYATNVALQVAKKAGTNPRE 98 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A ++ + P++DS +AG GFINL L + I++ I+ G YG + I G K+ Sbjct: 99 LAGWLIDALVALPEIDSADVAGPGFINLRLGAAATGGIVADILAKGEAYGSSDIYDGEKI 158 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++ FSG EVTREYY ND G QI+ A S+ Sbjct: 159 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEFSGAEVTREYYFNDHGGQIDRFARSLV- 217 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY----SVQ 239 A N+ PE Y G Y+ + + + L E +V++ V+ Sbjct: 218 ----AAAKNEP-TPEDGYGGEYIADIASAVVAENPGIL-----EGDAAVVQEAFRREGVE 267 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M I+ L D+F E+ + + I L G +YE Sbjct: 268 KMFAQIKQSLHDFGTDFDVFFHENSLF--ESGAVDRAIQTLKDNGNLYE----------- 314 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + RST GDD DR +LKSDG Y A D+AY K++RG IY++G+D Sbjct: 315 -----NDGAWWLRSTDFGDDKDRVVLKSDGDAAYIAGDIAYVADKFDRGHTLAIYMLGAD 369 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL A A A+ + VL+ ++V L RDG P+KMSKRAG ITL +VD +G Sbjct: 370 HHGYIARLRAAAQALGYNPEAVEVLIGQMVNLVRDGQPVKMSKRAGTVITLDDLVDVIGV 429 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF------- 472 D+ R+ M+ LD D ++QS +NPV+YVQY + R SI R+A + Sbjct: 430 DAARYSMVRSSVDSTLDIDLDLWEKQSNDNPVYYVQYGHTRLASIERKAAEAGVVLARSD 489 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 D + DL +++ E E D LI L E+P V++ A +EP+++A Y +LASVF Sbjct: 490 DDEEVDL---SLLTHEKEGD-----LIRTLGEFPAVVKAAAELREPHRIARYAEELASVF 541 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H + + P+ + + + RL L A ++ + L ++GV +P M Sbjct: 542 HKFYDACQILPK---AGEDPQPIHAARLTLASASRQVLANALRLLGVTAPERM 591 >gi|294506995|ref|YP_003571053.1| Arginyl-tRNA synthetase, class Ic [Salinibacter ruber M8] gi|294343323|emb|CBH24101.1| Arginyl-tRNA synthetase, class Ic [Salinibacter ruber M8] Length = 562 Score = 302 bits (773), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 190/575 (33%), Positives = 305/575 (53%), Gaps = 58/575 (10%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK--IDPD-VDSVFIAGKGF 88 I +E P HG L+TN A+ L+ LG +P +IA+ + R++ +DP + +V +AG GF Sbjct: 25 IELEAPDRPEHGDLATNTALRLASVLGDNPRSIADTLAERLRGRVDPARIKNVEVAGPGF 84 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 +N + YL L+ ++ G +G+ G G + +E+VSANPTGP++VGH R AV+GD Sbjct: 85 VNFRFAQDYLFDGLADLLAQGDTFGQTDAGAGQRALVEYVSANPTGPLNVGHGRNAVLGD 144 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---------------- 192 T+A+L+A++GY+VTREYY NDAG Q+ LA SV RY +AL N Sbjct: 145 TIANLLAWTGYDVTREYYYNDAGRQMRVLAQSVRARY-EALAGNVPTTTLTLDDDTTVEV 203 Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252 PE Y G Y+ + + L D++ L + L + + A+ I L AL Sbjct: 204 PETFPEDGYLGQYIVEIAQNLYDEHGDALCATDD---LAPFRAAAETAIFGDIEATLHAL 260 Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312 NI D + +E H D + ++D LA GY YE + L F+ Sbjct: 261 NIDMDGYANEQALH--DEGRVDAVLDGLADAGYTYE----------------EDGALWFK 302 Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372 +T G + D L+K G TY D+AY K+ERGFD M+ V G+DH + + Sbjct: 303 TTEFGTEDDTVLVKQTGEPTYRTPDIAYHAAKFERGFDLMVDVFGADHHAAYPDVLSALD 362 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 + +++V+L + V L R P+KMS R +++TL ++++VG+D RF L R Sbjct: 363 VLGYDTDRVDVILYQFVTLVRGDEPVKMSTRRANYVTLDDLIEQVGADVTRFFFLMRSPD 422 Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI--FPDLDFDLFPRNVIPQESE 490 L+FD +E+S++NPVFY+QYA+AR S+ +A+++ D D DL ++ E Sbjct: 423 THLNFDLELAEEESEKNPVFYLQYAHARICSVLDKAEEVGFSHDEDADL---ALLTHE-- 477 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550 E+ LI L +P+ ++NA A+ P+ + YL D+A+ F + + R + Sbjct: 478 ---DEIALIKELLRFPQELQNAAGARAPHFVPNYLRDVATAFSQFYDNCR-------IIG 527 Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++L R++L A +++ +GL ++G+ +P +M Sbjct: 528 EEQELASARMRLALAAKTVLKNGLTVLGISAPRQM 562 >gi|238028767|ref|YP_002912998.1| arginyl-tRNA synthetase [Burkholderia glumae BGR1] gi|237877961|gb|ACR30294.1| Arginyl-tRNA synthetase [Burkholderia glumae BGR1] Length = 594 Score = 302 bits (773), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 203/617 (32%), Positives = 313/617 (50%), Gaps = 68/617 (11%) Query: 3 LFADFSSRLKNYLK-EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 L AD ++ LK E D V I +ERP+ AHG ++ N A+ L++PLG +P Sbjct: 12 LLADSVKQVVQALKGEADAAFAVPA-----ITLERPKAAAHGDVACNVALQLAKPLGTNP 66 Query: 62 LTIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117 +AE IVA + P V++ IAG GFINL L+ + ++ ++ +GR+ Sbjct: 67 RQLAEQIVAAVTAQPAAAGLVEAAEIAGPGFINLRLTAGAKQAVIGAVFAERDAFGRSDR 126 Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 G +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI L Sbjct: 127 DAGRRVLLEFVSANPTGPLHVGHGRQAALGDVLANVLASQGYAVHREFYYNDAGVQIGNL 186 Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE------LADKYSSELLNFPEEKWLP 231 ALS R + L D+ PE Y G Y+ + +E +A + + + L Sbjct: 187 ALSTQAR-ARGLKPGDAAWPEAAYNGEYIADIAREYLAGATVAASDGQPVTGKGDVEDLE 245 Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291 ++ ++V + + DLKA ++ D + E + + + ++ L G YE Sbjct: 246 AIRRFAVAYLRREQDTDLKAFGVRFDQYYLESSLY--EEGRVERTVNALVAAGMTYE--- 300 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351 L R+T GDD DR + KSDG+YTYF D+AY K+ERGF Sbjct: 301 -------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVAKWERGFTK 347 Query: 352 MIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 +I + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T Sbjct: 348 VINIQGSDHHGTIARVRAGLQGLGIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVT 407 Query: 410 LRHVV-----------------DEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 +R ++ DE G D+VRF ++ RK FD +Q+ E Sbjct: 408 VRDLIEWSGGAAPGSEASPDQLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDE 467 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 NPV+YVQYA+AR S+ + K + L ++ P +S + + L+ LAEYP + Sbjct: 468 NPVYYVQYAHARICSVMNEWKSRHGGDEARLAGADLSPLDSR---AAMALLQKLAEYPDM 524 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 + +A P+ +AFYL +LA FH ++ R V ++ R+ L+ A Sbjct: 525 LTHAAGELAPHAVAFYLRELAGEFHSFYNAER-------VLVDDEAQRTARIALLAATRQ 577 Query: 569 IINSGLNIIGVESPNEM 585 ++ +GL ++GV SP++M Sbjct: 578 VLANGLAVLGVSSPSKM 594 >gi|306835846|ref|ZP_07468842.1| arginine--tRNA ligase [Corynebacterium accolens ATCC 49726] gi|304568263|gb|EFM43832.1| arginine--tRNA ligase [Corynebacterium accolens ATCC 49726] Length = 550 Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 186/582 (31%), Positives = 303/582 (52%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD ++ +K E+ + ++ +L D +ERPR+ HG +TN A+ +++ G +P Sbjct: 4 ADLATLVKESATEVMAEHDLDASVLPDTATVERPRNPEHGDYATNLALQVAKKAGANPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 + ++ + IAG GFIN+ L+ + +I++ I+ +G +YG N G K+ Sbjct: 64 FGGWLAEKLAEHDAIAEADIAGPGFINIRLAAAAQGEIVAQILQAGADYGSNDSFAGKKI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++ SG EVTREYY ND G QI+ + S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLTASGAEVTREYYFNDHGGQIDRFSRSLVA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + + +K S L + D V+ M Sbjct: 184 AAKG------EPTPEDGYGGDYIHDIASAVVEKNPSALEGDAAQVQEAFRAD-GVEMMFA 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L + D++ E+ + + ++ L +G++YE Sbjct: 237 QIKQSLHEFGVDFDVYFHENSLF--ESGAVDKALETLKSEGHLYEA-------------- 280 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 +ST GD DR ++KSDG+ Y A D+AY K++RG D IY++G+DH GY Sbjct: 281 --DNAWWLKSTDYGDSKDRVVVKSDGNAAYIAGDIAYVADKFDRGHDLNIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 V RL+A AAA+ + VL+ ++V L RDG P++MSKRAG IT+ +V +G D+ R Sbjct: 339 VPRLKAAAAALGYDADGVEVLIGQMVNLLRDGKPVRMSKRAGTVITIEDLVAAIGIDASR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ + +D D + QS +NPV+YVQY +AR SI R+A ++ + + + Sbjct: 399 YSLVRSSADQSIDIDLGLWESQSSDNPVYYVQYGHARLCSIGRKAAEL--GVSSEGADLS 456 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ E E D LI L E+P V+ +A +EP+++A Y +LA VFH + + P Sbjct: 457 LLEHEREGD-----LIRTLGEFPAVVADAAELREPHRVARYAEELAGVFHRFYDTCQVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + RL L A ++++ L ++GV SP +M Sbjct: 512 K---AGEEEQPIHSARLALAEASRVVLSNALTMVGVSSPEKM 550 >gi|291320435|ref|YP_003515699.1| arginyl tRNA synthetase [Mycoplasma agalactiae] gi|290752770|emb|CBH40745.1| Arginyl tRNA synthetase [Mycoplasma agalactiae] Length = 539 Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 204/585 (34%), Positives = 310/585 (52%), Gaps = 55/585 (9%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D +L++ LKEI + + + + + E + HG L+TN A+ + P+ +A Sbjct: 5 DLKEKLESKLKEIASSLGITRSVF---LTESKK---HGDLTTNMAL---GNANIKPMELA 55 Query: 66 ELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR-NLIGKGTKV 123 IV+ I ++ + ++ +A GFIN + YL ++ I+ G YG+ N +GK V Sbjct: 56 NQIVSMINLEEFGIKNISVANPGFINFSIGDDYLVSGVNQILKLGKNYGKGNKVGK---V 112 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EF+SANPTG +HVGH R A VG T+A+++ F+GY V REYYINDAG QIN LA S++ Sbjct: 113 NVEFISANPTGFLHVGHARNAAVGSTIANILEFAGYSVVREYYINDAGNQINVLANSLWS 172 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK-WLPIVKDYSVQAMM 242 RY+Q Y D +PE Y G + ++ K+ + N +K L +VK+ ++ M Sbjct: 173 RYKQIFY-PDYSMPEESYKGEDIVWGAQKFYAKFGDKFKNNELDKELLELVKNEAISIFM 231 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 I++DL + D + SE + D I++ I +L + Y +G Sbjct: 232 SKIQEDLANFGVWFDNYFSEKSLYENDEVKIKETIKSL-KNAYDNDG------------- 277 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFD-NMIYVMGSDH 360 L ++T+ GDD DR L+KSDGSYTYF D+ Y + KY+R G D +I V G+DH Sbjct: 278 -----ALWLKTTIHGDDKDRVLVKSDGSYTYFLPDIVYHQDKYKRMGADATIINVWGADH 332 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 SGYVKR++ + + + VL +LVRL ++G KMSKR G L V VG D Sbjct: 333 SGYVKRMQCAVKDLGLNEQNLVVLCMQLVRLVKNGEEFKMSKRKGTSFFLNEFVKMVGKD 392 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 S RF++L R + LDFD Q+ +NP VQYA ARC S+ R+A + D Sbjct: 393 SARFLLLDRTLNSKLDFDINLATSQNNDNPAILVQYANARCHSLIRKA-------NIDSN 445 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 I + + D S LI L E+P V+E + + L YL LA F+ +++ Sbjct: 446 NLYAISFDKQSDNS---LITTLLEFPSVVEKSADKYATHLLTQYLVKLAKEFNSWYTN-- 500 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +P+L + + N + ++ LV AV+ I +GL ++ V +P M Sbjct: 501 -SPKL--IGSENE---ISKIALVKAVSITIENGLKLLEVSAPVSM 539 >gi|298345508|ref|YP_003718195.1| arginine--tRNA ligase [Mobiluncus curtisii ATCC 43063] gi|304391064|ref|ZP_07373016.1| arginine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315656160|ref|ZP_07909051.1| arginine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|298235569|gb|ADI66701.1| arginine--tRNA ligase [Mobiluncus curtisii ATCC 43063] gi|304325947|gb|EFL93193.1| arginine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315493162|gb|EFU82762.1| arginine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 559 Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 179/566 (31%), Positives = 296/566 (52%), Gaps = 44/566 (7%) Query: 28 ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87 + +++ +ERP++ HG +TN A+ L + +G +P +AE+ + I V S +AG G Sbjct: 30 LAEKMRVERPKNRDHGDWATNIALQLGKSVGKNPRELAEIFASAIAQIDGVSSAEVAGPG 89 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FIN+ L +++ I+ SG +YG KG +N+E+VSANPTGP+H+G R A VG Sbjct: 90 FINIRLEAGAAGALVADILASGNDYGHGEGLKGVHINLEYVSANPTGPLHIGGARWAAVG 149 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D+LA L FSG +VTREYY ND G+QI+ A+S+ + + PE Y G Y+ Sbjct: 150 DSLARLYKFSGAKVTREYYFNDHGSQIDRFAISLLAAAR------GQETPEDGYGGQYIA 203 Query: 208 HVGKELADKYSS----ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 + ++ + + + +E + + V+ M I++ L+ + D+F E+ Sbjct: 204 DIAAKVQAEAKAAGDPDPATLDDEAAQEYFRSHGVELMFDEIKESLRGFRTEFDVFFHEN 263 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323 + + + +D L +G V E K T +T GDD DR Sbjct: 264 SLY--ETGAVTKALDYLRERGEVIE------KDGAT----------WLLTTKHGDDKDRV 305 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QIN 382 ++KSDG+ +YFA+D+AY++ K RG D ++++G+DH GYV R+ A+ AA +K + Sbjct: 306 VIKSDGNASYFASDVAYYQDKRRRGADRAVFLLGADHHGYVGRMMAMCAAYGDKPGVNMQ 365 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 +++ +LV L++DG P++MSKRAGD +TL V+ VG D+ R+ ++ L D + Sbjct: 366 IIIGQLVNLFKDGEPVRMSKRAGDIVTLEDFVEAVGVDAARYALVRSSMDTQLAIDLDVL 425 Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 + ENPV+YVQYA+AR ++ + A P E D ++ LI L Sbjct: 426 ASHTNENPVYYVQYAHARTSNVAKNAAAHGVSCADGFAP------EELRDPADAALIGVL 479 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR--- 559 A++P V+ A + + YL +L+ +H + R P A + +T Sbjct: 480 AQFPSVVATAAAENATHLVPRYLENLSGAYHTWYGKRRVTP------AGDEPVTAEHAAL 533 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L +AV ++ +GL+++GV +P M Sbjct: 534 LALNNAVGQVLRNGLDLLGVTAPERM 559 >gi|15827558|ref|NP_301821.1| arginyl-tRNA synthetase [Mycobacterium leprae TN] gi|221230035|ref|YP_002503451.1| arginyl-tRNA synthetase [Mycobacterium leprae Br4923] gi|13432208|sp|P45840|SYR_MYCLE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|254782977|sp|B8ZR24|SYR_MYCLB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|13093108|emb|CAC31508.1| arginyl-tRNA synthase [Mycobacterium leprae] gi|219933142|emb|CAR71222.1| arginyl-tRNA synthase [Mycobacterium leprae Br4923] Length = 550 Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 189/565 (33%), Positives = 287/565 (50%), Gaps = 57/565 (10%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + +ERPR+ HG S+N AM L + +G +PL +A + + + V +AG GFIN+ Sbjct: 32 VTVERPRNPEHGDYSSNLAMQLGKKVGANPLELAGWLAEVLAQAGGIADVEVAGPGFINM 91 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S I+++++ + +G + G ++N+EFVSANPTGP+H+G R A VGD L Sbjct: 92 RLDASAQAMIVNTVINADKNFGHSDDLAGYQINLEFVSANPTGPIHIGGTRWAAVGDALG 151 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 L++ G V REYY ND GAQI+ S+ + L P Y G Y+ + Sbjct: 152 RLLSTQGAAVVREYYFNDHGAQIDRFTNSLIAAAKGEL------TPADGYAGTYVTDIAA 205 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 ++ + + L+ PE + V++ V M I+ L D++ ED H Sbjct: 206 QVMQQ-APYALSLPESEMHETVREIGVDLMFTHIKKSLHEFGTDFDVYTHEDSMHA--SG 262 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + + I L G VYE L R++ GDD DR ++KSDG Sbjct: 263 RVDEAIARLRDTGNVYE----------------KDGALWLRTSAFGDDKDRVVIKSDGKP 306 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 Y A DLAY+ K +RGFD IY++G+DH GY+ RL+A AAA + A + VL+ ++V L Sbjct: 307 AYIAGDLAYYLDKRQRGFDLCIYMLGADHHGYIARLKAAAAAFGDDPAIVEVLIGQMVNL 366 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 DG ++MSKR+G+ ITL +V+ +G D+ R+ ++ +D D S ENPV Sbjct: 367 VCDGQLVRMSKRSGNVITLDDLVEAIGVDAARYSLIRSSVDTPIDIDLALWSSSSNENPV 426 Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH---------L 502 +YVQYA+AR ++ R A +F L P DT L+L+ H + Sbjct: 427 YYVQYAHARLSALARNAA------EFGLIP----------DTGHLELLSHDKEGALLRTV 470 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR--KLTMMRL 560 E+P+V++ A +EP+++ YL DLA +H + R P Q + + L RL Sbjct: 471 GEFPQVLKTAAALREPHRVCRYLEDLAGDYHRFYDSCRVLP-----QGDEKPTDLHTARL 525 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 L A +I +GL I+GV +P M Sbjct: 526 ALCQANRQVIANGLAILGVSAPERM 550 >gi|298253127|ref|ZP_06976919.1| arginyl-tRNA synthetase [Gardnerella vaginalis 5-1] gi|297532522|gb|EFH71408.1| arginyl-tRNA synthetase [Gardnerella vaginalis 5-1] Length = 598 Score = 301 bits (770), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 189/596 (31%), Positives = 314/596 (52%), Gaps = 72/596 (12%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 +++ + RP+D AHG +TN AM L++ G+ P +AEL R++ + SV +AG GFI Sbjct: 35 EKLAVMRPKDRAHGDWATNVAMQLAKKAGMKPHDLAELFAERLQEAEGIASVEVAGPGFI 94 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N+ L + ++ ++ G +G+N G +N+EFVSANPTGP+H+G R A VGD+ Sbjct: 95 NITLDSASAAAVVDEVLKQGAAFGKNTHLSGKTLNLEFVSANPTGPIHIGGTRWAAVGDS 154 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 +A ++ +G +V REYY ND G QIN A S+ A + ++ P Y G Y+ + Sbjct: 155 MARVLEANGAKVVREYYFNDHGEQINRFAKSLV----AAAHGEET--PADGYKGAYINEI 208 Query: 210 GKEL---ADKYSSELLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDLK 250 + A+ ++L+ P +E+ LP+ + S Q M IR ++ Sbjct: 209 ADSVIKEANADGVDVLSLPRIDLGKDEEGLPLGEGDSEQREEFRKRAVPMMFAEIRKSMR 268 Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310 + D++ E+ + + + I +L +G ++E K T Sbjct: 269 DFRVSFDVWFHENSLY--EDGEVERAIADLRERGDIFE------KDGAT----------W 310 Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG---FDNMIYVMGSDHSGYVKRL 367 F ST GDD DR ++KSDG+Y YFAAD+AY++ K R D IY++G+DH GY+ R+ Sbjct: 311 FESTKHGDDKDRVIIKSDGNYAYFAADIAYYRNKRHREQNPADVAIYMLGADHHGYIGRM 370 Query: 368 EAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 A+ AA +K + + +L+ +LV + +DG P++MSKRAG+ IT+ +VD +G D+ R+ + Sbjct: 371 MAMCAAFGDKPGENMQILIGQLVNVMKDGKPVRMSKRAGNVITIDDLVDAIGVDASRYSL 430 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVI 485 + +D D + S +NPV+YVQYA+AR ++ R A D D DL N Sbjct: 431 ARTDYNTSVDIDLDLLASHSNDNPVYYVQYAHARSCNVARNAADAGITQDGADLSLLNT- 489 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR----- 540 ++ +++ LA++P + A + P+++A YL DLA+ +H ++ R Sbjct: 490 -------ETDGEVLAALAQWPAALAQAGDLRAPHRVAHYLEDLAASYHKWYNLERVVPME 542 Query: 541 -ENPRLRFVQANNRKLTM----------MRLQLVHAVASIINSGLNIIGVESPNEM 585 +P R +A + RL+L AV ++I +GL+++GV +P +M Sbjct: 543 LTDPENRLPEAEREAQRIAKCPEPARAAARLKLNAAVRTVIATGLDLLGVSAPEKM 598 >gi|227501671|ref|ZP_03931720.1| arginyl-tRNA synthetase [Corynebacterium accolens ATCC 49725] gi|227077696|gb|EEI15659.1| arginyl-tRNA synthetase [Corynebacterium accolens ATCC 49725] Length = 550 Score = 301 bits (770), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 185/582 (31%), Positives = 303/582 (52%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD ++ +K + + ++ +L D + +ERPR+ HG +TN A+ +++ G +P Sbjct: 4 ADLATLVKESATAVMAEHDLDASVLPDSVTVERPRNPEHGDYATNLALQVAKKAGANPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 + ++ + IAG GFIN+ L+ + +I++ I+ +G +YG N G K+ Sbjct: 64 FGGWLAEKLAQHDAIAEADIAGPGFINIRLAAAAQGEIVAQILQAGADYGSNDSFAGKKI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++ SG EVTREYY ND G QI+ + S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLTASGAEVTREYYFNDHGGQIDRFSRSLVA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + + +K S L + D V+ M Sbjct: 184 AAK------GEPTPEDGYGGDYIHDIASAVVEKNPSALEGDAAQVQEAFRAD-GVEMMFA 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L + D++ E+ + + ++ L +G++YE Sbjct: 237 QIKQSLHEFGVDFDVYFHENSLF--ESGAVDKALETLKSEGHLYEA-------------- 280 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 +ST GD DR ++KSDG+ Y A D+AY K++RG D IY++G+DH GY Sbjct: 281 --DNAWWLKSTDYGDSKDRVVVKSDGNAAYIAGDIAYVADKFDRGHDLNIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 V RL+A AAA+ + VL+ ++V L RDG P++MSKRAG IT+ +V +G D+ R Sbjct: 339 VPRLKAAAAALGYDADGVEVLIGQMVNLLRDGKPVRMSKRAGTVITIEDLVAAIGVDASR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ + +D D + QS +NPV+YVQY +AR SI R+A ++ + + + Sbjct: 399 YSLVRSSVDQSIDIDLGLWESQSSDNPVYYVQYGHARLCSIGRKAAEL--GVSSEGADLS 456 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ E E D LI L E+P V+ +A +EP+++A Y +LA VFH + + P Sbjct: 457 LLEHEREGD-----LIRTLGEFPAVVADAAELREPHRVARYAEELAGVFHRFYDTCQVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + RL L A ++++ L ++GV SP +M Sbjct: 512 K---AGEEEQPIHSARLALAEASRVVLSNALTMVGVSSPEKM 550 >gi|134297105|ref|YP_001120840.1| arginyl-tRNA synthetase [Burkholderia vietnamiensis G4] gi|166232769|sp|A4JIA2|SYR_BURVG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|134140262|gb|ABO56005.1| arginyl-tRNA synthetase [Burkholderia vietnamiensis G4] Length = 593 Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 204/616 (33%), Positives = 316/616 (51%), Gaps = 67/616 (10%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L AD +++ + LK D + ++ I +ERP+ AHG ++ N AM L++PLG +P Sbjct: 12 LLADSVAQVAHALKGADAEF-----VIPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66 Query: 63 TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +AE IVA + P VD+ IAG GFINL +S + + +++++ G +G + Sbjct: 67 QLAERIVAALVAQPAAQGLVDAAEIAGPGFINLRVSAAAKQAVIAAVFEQGRAFGTSQRE 126 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA Sbjct: 127 KGKRVLVEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIANLA 186 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPI 232 +S R + L D+ PE Y G Y+ + G +A K + + + L Sbjct: 187 ISTQAR-ARGLKPGDAGWPEAAYNGEYIADIARDYLNGATVAAKDGEPVTGARDIENLDA 245 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + DL+A ++ D + E + + +D L + G YE Sbjct: 246 IRKFAVAYLRHEQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALVKAGMTYE---- 299 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L R+T GDD DR + KSDG+YTYF D+AY K+ERGF + Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTKV 347 Query: 353 IYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 I + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+ Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKLSKRAGSYVTV 407 Query: 411 RHV-----------------VDEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 R + +DE G D+VRF ++ RK FD +Q+ EN Sbjct: 408 RDLIEWSGGAAPGQEAAPDMIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 PV+YVQYA+AR S+ + K + ++D P + Q + + L+ LAEYP ++ Sbjct: 468 PVYYVQYAHARICSVLNELKARY-NVDVAQLPGADLSQLTS--PQAVSLMQKLAEYPDLL 524 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 +A P+ +AFYL DLA FH ++ R V ++ R L+ A + Sbjct: 525 THAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577 Query: 570 INSGLNIIGVESPNEM 585 + +GL ++GV +P +M Sbjct: 578 LENGLAMLGVSAPAKM 593 >gi|270284697|ref|ZP_05966509.2| arginine--tRNA ligase [Bifidobacterium gallicum DSM 20093] gi|270276344|gb|EFA22198.1| arginine--tRNA ligase [Bifidobacterium gallicum DSM 20093] Length = 631 Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 190/601 (31%), Positives = 315/601 (52%), Gaps = 70/601 (11%) Query: 24 VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83 VE +++ + RP+D AHG ++NAAM L++ G+ P +AE V +++ P + SV + Sbjct: 62 VELPPVEKFSVMRPKDRAHGDWASNAAMQLAKKAGMKPRDLAEQFVEKLQDVPGIASVEV 121 Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143 AG GFIN+ L + ++ ++ G +G+N G +N+EFVSANPTGP+H+G R Sbjct: 122 AGPGFINITLDSASAAAVVDQVLAQGSAFGKNTHLGGKTLNLEFVSANPTGPIHIGGTRW 181 Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203 A VGD++A ++ +G +V REYY ND G QIN A S+ ++ P Y G Sbjct: 182 AAVGDSMARVLEANGAKVIREYYFNDHGEQINRFAKSLV------AAAHEETTPVDGYKG 235 Query: 204 VYLKHVGKEL---ADKYSSELLNFP------EEKWLPIVKDYSVQ----------AMMKI 244 Y+ + + + A+ ++LN P +E P+ + S Q M Sbjct: 236 AYIDEIARRVIAEANADGVDILNLPRVDGGTDEHGEPLGEGDSEQREEFRKRAVPMMFDE 295 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 I+ +K + D++ E+ + + + I +L +G ++E K T Sbjct: 296 IQQSMKNFRVNFDVWFHENSLY--EDGEVDKAIADLRARGDIFE------KDGAT----- 342 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER---GFDNMIYVMGSDHS 361 F ST GDD DR ++KSDG+Y YFAAD+AY++ K R D IY++G+DH Sbjct: 343 -----WFASTKHGDDKDRVIIKSDGNYAYFAADVAYYRNKRHREEGSADVAIYMLGADHH 397 Query: 362 GYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY+ R+ A+ AA ++ Q + +L+ +LV + +DG P++MSKRAG+ +T+ +VD +G D Sbjct: 398 GYIGRMMAMCAAYGDEPGQHMQILIGQLVNVMKDGKPVRMSKRAGNIVTIDDLVDAIGVD 457 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 + R+ + + +D D + S ENPV+YVQYA+AR ++ R A + D Sbjct: 458 ASRYSLARTDYNSPVDIDLDLLASHSNENPVYYVQYAHARSCNVDRNAAEAGITTD---- 513 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 ++ ++E D ++I LA++P V+ A + P+++A YL DLA+ +H ++ R Sbjct: 514 GADLALLDTEADG---EVIAALAQWPGVLAEAGDKRAPHRVAHYLEDLAAAYHKWYNVER 570 Query: 541 ENP----------------RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 P LR + RL+L AV +I +GL+++GV +P++ Sbjct: 571 VVPMGLTDPEQHLDTQAAEALRIAKNPEPARAAARLKLNDAVQQVIVNGLDLLGVSAPDK 630 Query: 585 M 585 M Sbjct: 631 M 631 >gi|25027832|ref|NP_737886.1| arginyl-tRNA synthetase [Corynebacterium efficiens YS-314] gi|259506223|ref|ZP_05749125.1| arginine--tRNA ligase [Corynebacterium efficiens YS-314] gi|38372529|sp|Q8FQ57|SYR_COREF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|23493115|dbj|BAC18086.1| putative arginyl-tRNA synthetase [Corynebacterium efficiens YS-314] gi|259166200|gb|EEW50754.1| arginine--tRNA ligase [Corynebacterium efficiens YS-314] Length = 550 Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 192/585 (32%), Positives = 303/585 (51%), Gaps = 42/585 (7%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD ++ +K E+ ++ +L ++IV+ERPR+ HG +TN A+ +++ +G+ P Sbjct: 4 ADLATLIKQTAVEVLTSRDLDASMLPEQIVVERPRNPEHGDYATNVALQVAKKVGVTPRD 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 + + + D +DS IAG GFIN+ L+ + +I++ I+ G ++G + V Sbjct: 64 LGTWLAEALAADDSIDSAEIAGPGFINIRLAAAAQGEIVAKILEQGEKFGTSDHLSHLDV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++ +G +VTREYY ND G QI+ ALS+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEAAGAKVTREYYFNDHGRQIDRFALSLLA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y++ + + + K+ L PEE + + V+ M Sbjct: 184 AAKG------EPTPEDGYGGEYIREIAEAIVAKHPDALDRTPEETQ-ELFRSEGVEMMFS 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 IR+ L D++ E+ + + + L G +YE Sbjct: 237 HIRESLHEFGTDFDVYFHENSLF--ESGAVDRAVQKLKDNGNLYES-------------- 280 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 RST GDD DR ++KSDG Y A D+AY + K+ERG + IY++G+DH GY Sbjct: 281 --DGAWWLRSTDFGDDKDRVVIKSDGDAAYIAGDIAYVQDKFERGHNLNIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA+ + VL+ ++V L RDG ++MSKRAG +TL +V+ +G D+ R Sbjct: 339 IARLKAAAAALGYAPEGVEVLIGQMVNLLRDGTAVRMSKRAGTVVTLDDLVEAIGIDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLF 480 + ++ LD D + QS +NPV+YVQY +AR SI R+A D+ + D D L Sbjct: 399 YSLIRSSVDSSLDIDLGLWESQSSDNPVYYVQYGHARLCSIARKAADLGVTYEDADLSLL 458 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 + E LI L E+P VI A +EP+++A Y +LA FH + + Sbjct: 459 THD----------REGDLIRTLGEFPAVIRAAADLREPHRIARYAEELAGTFHRFYDSCQ 508 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P+ +A + RL L A + + L ++GV +P +M Sbjct: 509 ILPKADEEKA---PIHAARLALAAATRQTLANALALVGVSAPEKM 550 >gi|121592776|ref|YP_984672.1| arginyl-tRNA synthetase [Acidovorax sp. JS42] gi|120604856|gb|ABM40596.1| arginyl-tRNA synthetase [Acidovorax sp. JS42] Length = 577 Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 194/588 (32%), Positives = 306/588 (52%), Gaps = 63/588 (10%) Query: 23 KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----V 78 KV R E P+ AHG L+ AAM L++PL +P + E + A ++ P V Sbjct: 28 KVSPGAGSRAAFESPKVAAHGDLACTAAMQLAKPLKQNPRALGEQLQAALEATPAFQKWV 87 Query: 79 DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138 ++ IAG GF+N+ L P+ ++++ ++ G +YG +G KV +EFVSANPTGP+HV Sbjct: 88 QAIEIAGPGFLNIRLKPAAKQQVVHEVLAQGAQYGYQ-PARGEKVLVEFVSANPTGPLHV 146 Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ-----QALYNND 193 GH R A +GD ++ L A G+ V RE+Y NDAG QI+TL S R + + D Sbjct: 147 GHGRQAAIGDAISHLYATQGWSVHREFYYNDAGVQIDTLTKSTQLRAKGFKPGDDCWPTD 206 Query: 194 SDLP--EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI---VKDYS--VQAMMKIIR 246 +D P + +Y G Y+ +++AD + ++ +++ V+DY Q + +R Sbjct: 207 ADNPLAKNFYNGDYI----QDIADAFLAKATVQADDRAFTANGDVEDYENIRQFAVAYLR 262 Query: 247 D----DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 + DL+A N+Q D + E + + + L G YE Sbjct: 263 NEQDKDLQAFNLQFDQYYLESSLYAN--GHVDATVQRLVANGKTYE-------------- 306 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 L +ST GDD DR + K DG+YTYF D+AY K++RGF ++ + G+DH G Sbjct: 307 --QDGALWLKSTDYGDDKDRVMRKQDGTYTYFVPDVAYHIQKFQRGFTKVVNIQGTDHHG 364 Query: 363 YVKRLEA--VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 + R+ A AA V + + +L +VR+ R+G +K+SKRAG ++TLR +++ D Sbjct: 365 TIARVRAGLQAADVGIPQGYPDYVLHTMVRVVRNGEEVKISKRAGSYVTLRDLIEWTSKD 424 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI---FRQAKDIFPDLDF 477 +VRF +L RK FD Q+ +NPV+YVQYA+AR S+ +R+ D+ D Sbjct: 425 AVRFFLLSRKPDTEYTFDVDLAVAQNNDNPVYYVQYAHARICSVLRGWREDYDVAALRDV 484 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 DL P PQ L++ LA+YP ++ A P+ + FYL DLA+ +H ++ Sbjct: 485 DLSPLEG-PQAQA-------LMLLLAKYPEMLTAAAAGNAPHDVTFYLRDLAAAYHSYYD 536 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R + ++ + RL LV A A ++++GL ++GV +P M Sbjct: 537 AER-------ILVDDEAVKQARLALVAATAQVLHNGLAVLGVSAPARM 577 >gi|227498070|ref|ZP_03928243.1| arginine--tRNA ligase [Actinomyces urogenitalis DSM 15434] gi|226832538|gb|EEH64921.1| arginine--tRNA ligase [Actinomyces urogenitalis DSM 15434] Length = 533 Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 178/519 (34%), Positives = 274/519 (52%), Gaps = 39/519 (7%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +ERPR HG +TN AM L++ G +P + EL+ AR+ V SV +AG GF+N+ L Sbjct: 35 VERPRSREHGDWATNVAMQLAKKAGTNPRALGELLAARLGEVDGVASVEVAGPGFLNIRL 94 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + ++ +I+ +G YGRN GT VN+E+VSANPTGP+H+G R A VGD+LA + Sbjct: 95 DAASAGELARTILRAGASYGRNDSLAGTHVNLEYVSANPTGPVHLGGARWAAVGDSLARI 154 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 +A G +VTREYY ND G QI+ A S+ + + PE Y G Y+ + + + Sbjct: 155 LAACGAQVTREYYFNDHGTQIDRFARSLLAAAR------GQETPEDGYGGAYIGEIAQTV 208 Query: 214 ADKYSSEL-------LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 S EL P+ + + + V M I+ +L + D+F ED H Sbjct: 209 T---SGELEAGRPDPAALPDAEATEVFRARGVDLMFDSIKAELHEFHSDFDVFFHEDSLH 265 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 + + I+ L +G + E R+T GDD DR L+K Sbjct: 266 --ESGAVAAAIERLRERGVIEE----------------HDGATWLRTTDFGDDKDRVLIK 307 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLL 385 SDG YFA D+AY+ K +RG D IY++G+DH GY+ R+ A+ AA + + +L+ Sbjct: 308 SDGDAAYFAGDVAYYLDKRQRGADCAIYLLGADHHGYIGRMMAMCAAFGDTPGVNMQILI 367 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 +LV L ++G P++MSKRAG +TL +V VG D+ R+ + ++D D + Sbjct: 368 GQLVNLVKNGQPVRMSKRAGTIVTLEDLVSAVGVDAARYALTRSSMDSMIDIDLDLLASS 427 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 S ENPV+YVQYA+AR R++ R A + + + + + D ++ L+ LA+Y Sbjct: 428 SNENPVYYVQYAHARTRNVARNAAEHGVEREGAI----AFDPAALDDAADSALLGVLAQY 483 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 P V+ A +E +++A YL +LA +H ++ R PR Sbjct: 484 PAVVAQAASLREQHRVARYLEELAGAYHAWYAATRVTPR 522 >gi|300313639|ref|YP_003777731.1| arginyl-tRNA synthetase [Herbaspirillum seropedicae SmR1] gi|300076424|gb|ADJ65823.1| arginyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1] Length = 577 Score = 300 bits (768), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 203/615 (33%), Positives = 307/615 (49%), Gaps = 70/615 (11%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + A R+ + + E + I +ERPRD +HG ++ N AM L++PL +P Sbjct: 1 MLAQQKQRISDLFSSALQPLLAESGLTPTITLERPRDASHGDVACNIAMQLAKPLKKNPR 60 Query: 63 TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +A+ IVA + DP V+SV IAG GFINL ++ + + ++ I G YGR G Sbjct: 61 ELAQAIVAAVMADPAREDLVESVEIAGPGFINLRVAAAAKQAVVKVIHEQGEAYGRGSAG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G KV +EFVSANPTGP+HVGH R +GD L+SL+ GY+V RE+Y NDAG QI TLA Sbjct: 121 AGKKVLVEFVSANPTGPLHVGHGRQGALGDALSSLLEAQGYDVLREFYYNDAGVQIATLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS------SELLNFPEEKWLPI 232 SV R + D++ PE Y G Y+ + ++ DK + + E + Sbjct: 181 TSVQAR-ARGFKPGDAEWPESAYNGDYIADIARDFLDKKTVSASDGEPVTGSGEVDDIES 239 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + DL+A ++ D + E + + +D L G YE Sbjct: 240 IRRFAVAYLRHEQDLDLQAFGVKFDNYYLESSLYA--DGKVAAAVDALIAAGKTYE---- 293 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L R+T GDD DR + K+DG+YTYF D+AY K++RG+ + Sbjct: 294 ------------QDGALWLRTTDYGDDKDRVMKKTDGTYTYFVPDVAYHINKWQRGYGKV 341 Query: 353 IYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 I + GSDH G + R+ A AA V + + +L ++V + R+G +K+SKRAG ++TL Sbjct: 342 INIQGSDHHGTIARVRAGLQAAGVGIPQGYPDYVLHKMVTVMRNGEEVKISKRAGSYVTL 401 Query: 411 RHVVD--------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456 R +++ G D+VRF ++ RK FD QS ENPV+YVQY Sbjct: 402 RDLIEWSAGEPVEGQERDLTRGRDAVRFFLISRKADTEFVFDVDLALAQSDENPVYYVQY 461 Query: 457 AYARCRSIF------RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 A+AR ++ +A DL PR E L+ LAEYP ++ Sbjct: 462 AHARICTVLGKSGVDEEALKSSADLSLLTAPR------------EATLLAKLAEYPDMLA 509 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A P+++AFYL DLA H +++ R V ++ RL L+ A ++ Sbjct: 510 HALQELGPHQVAFYLRDLAGELHSYYNAER-------VLVDDVPTRSARLALLSATRQVL 562 Query: 571 NSGLNIIGVESPNEM 585 +GL ++GV +P M Sbjct: 563 RNGLALLGVSAPARM 577 >gi|115353019|ref|YP_774858.1| arginyl-tRNA synthetase [Burkholderia ambifaria AMMD] gi|122322101|sp|Q0BBE9|SYR_BURCM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|115283007|gb|ABI88524.1| arginyl-tRNA synthetase [Burkholderia ambifaria AMMD] Length = 593 Score = 300 bits (768), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 204/616 (33%), Positives = 314/616 (50%), Gaps = 67/616 (10%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L AD +++ + LK D + I +ERP+ AHG ++ N AM L++PLG +P Sbjct: 12 LLADSVTQVAHALKGADAAF-----VAPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66 Query: 63 TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +AE IVA + P VD+ IAG GFINL L+ + + +++++ G +G + Sbjct: 67 QLAEKIVAALTAQPAAQGLVDAADIAGPGFINLRLTAAAKQAVIAAVFEQGRAFGTSDRE 126 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA Sbjct: 127 KGKQVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE------LADKYSSELLNFPEEKWLPI 232 +S R + L D+ PE Y G Y+ + ++ +A K + + L Sbjct: 187 ISTQAR-ARGLKPGDAGWPEAAYNGEYIADIARDYLNRETVAAKDGEPVTGAGDIDDLDA 245 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + DL+A ++ D + E + + +D L + G YE Sbjct: 246 IRKFAVAYLRHEQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALVKAGMTYE---- 299 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L R+T GDD DR + KSDG+YTYF D+AY K+ERGF + Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTQV 347 Query: 353 IYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 I + GSDH G + R+ A V K + +L ++V + RDG +K+SKRAG ++T+ Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHVGIPKGYPDYVLHKMVTVMRDGQEVKLSKRAGSYVTV 407 Query: 411 R-----------------HVVDEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 R ++DE G D+VRF ++ RK FD +Q+ EN Sbjct: 408 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 PV+YVQYA+AR S+ + K + ++D P + Q + + L+ LAEYP ++ Sbjct: 468 PVYYVQYAHARICSVLNELKSRY-NVDVAQLPGADLSQLTS--AQAVSLMQKLAEYPDML 524 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 +A P+ +AFYL DLA FH ++ R V ++ R L+ A + Sbjct: 525 THAAKELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577 Query: 570 INSGLNIIGVESPNEM 585 + +GL ++GV +P +M Sbjct: 578 LENGLAVLGVSAPAKM 593 >gi|254000508|ref|YP_003052571.1| arginyl-tRNA synthetase [Methylovorus sp. SIP3-4] gi|253987187|gb|ACT52044.1| arginyl-tRNA synthetase [Methylovorus sp. SIP3-4] Length = 552 Score = 300 bits (768), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 187/561 (33%), Positives = 290/561 (51%), Gaps = 40/561 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +ERP+ HG +TN AM+L++PL +P IAE ++ + V V IAG GFIN Sbjct: 25 IQLERPKSADHGDFATNLAMMLAKPLRQNPRAIAESLIQALPASEYVAKVEIAGAGFINF 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +L+ +++ I G +G N G+ KV +EFVSANPTGP+HVGH R A VGD LA Sbjct: 85 FLNGQARHGVIAQIREQGDRFGHNNAGQQRKVQVEFVSANPTGPLHVGHGRGAAVGDCLA 144 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 L+A +G++VTRE+Y NDAGAQI+ L SV R Q L PE Y G Y+ + K Sbjct: 145 RLLAANGWDVTREFYYNDAGAQIDNLTKSVHAR-AQGLTPEHPTFPEEGYRGEYIIDIAK 203 Query: 212 -----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 E ++ + L ++ ++V + DL+A I+ D+F E + Sbjct: 204 AYLAGETVVADDQQVTASGDVNDLESIRRFAVAYLRHEQDLDLQAFQIKFDVFSLESSLY 263 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 + + L G+ YE L ++T GDD DR + K Sbjct: 264 T--EGKVESTVQALINSGHTYE----------------QDDALWLKTTDFGDDKDRVMRK 305 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVL 384 +G YTYF D+AY K++RGF+ +I G+DH + R+ A A + + + + Sbjct: 306 REGGYTYFVPDVAYHVEKWKRGFERVINEQGADHHSTITRVRAGLQALDIGIPQGWPDYV 365 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L ++V + R G +K+SKRAG ++TLR +++EVG D+ R+ + R+ L FD + Sbjct: 366 LHQMVTVMRGGEEVKLSKRAGSYVTLRDLIEEVGCDATRYFLAARRADSQLVFDIDLARA 425 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 Q+ +NPV+Y+QYA+AR S+ Q L R P E+ L+ L E Sbjct: 426 QTNDNPVYYIQYAHARICSVLGQWGGDESSLVGADLSRLDAPHEAA-------LLQRLDE 478 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 + V++NA P+ +A YL +LAS H ++ N + V+ + L + R+ L+ Sbjct: 479 FSDVVKNAADELAPHMVANYLKELASDLHSYY-----NAQQFLVE--DSALKLARMALIS 531 Query: 565 AVASIINSGLNIIGVESPNEM 585 A ++ +GL+++GV +P +M Sbjct: 532 ATRQVLKNGLDLLGVSAPEKM 552 >gi|313202467|ref|YP_004041125.1| arginyl-tRNA synthetase [Methylovorus sp. MP688] gi|312441783|gb|ADQ85889.1| arginyl-tRNA synthetase [Methylovorus sp. MP688] Length = 552 Score = 300 bits (768), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 187/561 (33%), Positives = 290/561 (51%), Gaps = 40/561 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +ERP+ HG +TN AM+L++PL +P IAE ++ + V V IAG GFIN Sbjct: 25 IQLERPKSADHGDFATNLAMMLAKPLRQNPRAIAESLIQALPASEYVAKVEIAGAGFINF 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +L+ +++ I G +G N G+ KV +EFVSANPTGP+HVGH R A VGD LA Sbjct: 85 FLNGQARHGVIAQIREQGERFGHNNAGQQRKVQVEFVSANPTGPLHVGHGRGAAVGDCLA 144 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 L+A +G++VTRE+Y NDAGAQI+ L SV R Q L PE Y G Y+ + K Sbjct: 145 RLLAANGWDVTREFYYNDAGAQIDNLTKSVHAR-AQGLTPEHPTFPEEGYRGEYIIDIAK 203 Query: 212 -----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 E ++ + L ++ ++V + DL+A I+ D+F E + Sbjct: 204 AYLAGETVVADDQQVTASGDVNDLESIRRFAVAYLRHEQDLDLQAFQIKFDVFSLESSLY 263 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 + + L G+ YE L ++T GDD DR + K Sbjct: 264 T--EGKVESTVQALINSGHTYE----------------QDDALWLKTTDFGDDKDRVMRK 305 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVL 384 +G YTYF D+AY K++RGF+ +I G+DH + R+ A A + + + + Sbjct: 306 REGGYTYFVPDVAYHVEKWKRGFERVINEQGADHHSTITRVRAGLQALDIGIPQGWPDYV 365 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L ++V + R G +K+SKRAG ++TLR +++EVG D+ R+ + R+ L FD + Sbjct: 366 LHQMVTVMRGGEEVKLSKRAGSYVTLRDLIEEVGCDATRYFLAARRADSQLVFDIDLARA 425 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 Q+ +NPV+Y+QYA+AR S+ Q L R P E+ L+ L E Sbjct: 426 QTNDNPVYYIQYAHARICSVLGQWGGDESSLVGADLSRLDAPHEAA-------LLQRLDE 478 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 + V++NA P+ +A YL +LAS H ++ N + V+ + L + R+ L+ Sbjct: 479 FSDVVKNAADELAPHMVANYLKELASDLHSYY-----NAQQFLVE--DSALKLARMALIS 531 Query: 565 AVASIINSGLNIIGVESPNEM 585 A ++ +GL+++GV +P +M Sbjct: 532 ATRQVLKNGLDLLGVSAPEKM 552 >gi|297569633|ref|YP_003690977.1| arginyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2] gi|296925548|gb|ADH86358.1| arginyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2] Length = 555 Score = 300 bits (767), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 187/563 (33%), Positives = 295/563 (52%), Gaps = 51/563 (9%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFI 89 +E P+ G +TN AM+++ P IAE +V + + +F +AG GF+ Sbjct: 33 VEEPKRAGQGDFATNLAMVVAGREKRKPREIAEALVGLLSDPANNGDLFARVEVAGPGFV 92 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N ++ P + ++ +++ G +YGR G+G V +EFVSANPTGP+ VGH R AV+GD Sbjct: 93 NCFVKPEVWQGVVPAVLARGEDYGRGHSGEGRSVLVEFVSANPTGPLSVGHGRQAVLGDA 152 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 +A L+ GY VTREYY NDAG Q+ L SV RY + L D PE Y G Y++ + Sbjct: 153 IARLLTAVGYRVTREYYYNDAGRQMRVLGESVQARYLE-LLGRSGDFPEDGYQGEYIREI 211 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 + L ++ L + P+ LP K + + + I L L I+ D + +E + + Sbjct: 212 AQALVNEQGEALKDAPDH--LPFTKK-AEEVIFADINATLARLGIKFDHYYNEHTLY--E 266 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + D++ +L +G VY D D + F++T G + DR ++KS G Sbjct: 267 QGLVDDVVASLRDKGLVY---------------DQD-GAVWFKTTEFGLEQDRVIIKSSG 310 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 TY D+AY + K RG+D ++ V+GSDH V + A A+ ++ ++ + V Sbjct: 311 EPTYRLPDIAYHREKMRRGYDWLVNVLGSDHIATVPDVMAGLEALGYDSGKVTTVIHQFV 370 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 L R+G +KMS R F+T+ ++D VG+D RF L RK L+FD ++ +EN Sbjct: 371 TLMREGQQVKMSTRKATFVTVDELLDLVGADVARFFFLMRKADSQLEFDLDLATKEGQEN 430 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE-------FDTSELQLIVHL 502 PV+YVQYA+AR SI RQA++ + V+P +E EL L+ + Sbjct: 431 PVYYVQYAHARLCSIERQARE-----------KGVVPAAAEEIDFSRLEQAEELDLLQAM 479 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 A P ++E+A A EP+++ FYL D+A+ FHG+++ R + + L+ RL L Sbjct: 480 AGLPSLLESAAGALEPHRVVFYLQDMAAKFHGYYNRHR-------IVGEDLALSQARLAL 532 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 A+ + +GL +IGV +P M Sbjct: 533 ARALRVVFANGLQLIGVSAPESM 555 >gi|172061871|ref|YP_001809523.1| arginyl-tRNA synthetase [Burkholderia ambifaria MC40-6] gi|238689136|sp|B1YNQ7|SYR_BURA4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|171994388|gb|ACB65307.1| arginyl-tRNA synthetase [Burkholderia ambifaria MC40-6] Length = 593 Score = 300 bits (767), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 203/616 (32%), Positives = 314/616 (50%), Gaps = 67/616 (10%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L AD +++ + LK D + I +ERP+ AHG ++ N AM L++PLG +P Sbjct: 12 LLADSVTQVAHALKGADAAF-----VAPAITLERPKVAAHGDVACNVAMQLAKPLGANPR 66 Query: 63 TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +AE IVA + P VD+ IAG GFINL L+ + + +++++ G +G + Sbjct: 67 QLAEKIVAALTAQPAAQGLVDAAEIAGPGFINLRLTAAAKQAVIAAVFEQGRAFGTSDRK 126 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA Sbjct: 127 KGKQVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE------LADKYSSELLNFPEEKWLPI 232 +S R + L D+ PE Y G Y+ + ++ +A K + + L Sbjct: 187 ISTQAR-ARGLKPGDAGWPEAAYNGEYIADIARDYLNRETVAAKDGEPVTGAGDIDDLDA 245 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + DL+A ++ D + E + + +D L + G YE Sbjct: 246 IRKFAVAYLRHEQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALVKAGMTYE---- 299 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L R+T GDD DR + KSDG+YTYF D+AY K+ERGF + Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTQV 347 Query: 353 IYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 I + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+ Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKLSKRAGSYVTV 407 Query: 411 R-----------------HVVDEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 R ++DE G D+VRF ++ RK FD +Q+ EN Sbjct: 408 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 PV+YVQYA+AR S+ + K + ++D P + Q + + L+ LAEYP ++ Sbjct: 468 PVYYVQYAHARICSVLNELKSRY-NVDVAQLPGADLAQLTS--PQAVSLMQKLAEYPDML 524 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 +A P+ +AFYL DLA FH ++ R V ++ R L+ A + Sbjct: 525 THAAKELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577 Query: 570 INSGLNIIGVESPNEM 585 + +GL ++GV +P +M Sbjct: 578 LENGLAVLGVSAPAKM 593 >gi|332286305|ref|YP_004418216.1| arginyl-tRNA synthetase [Pusillimonas sp. T7-7] gi|330430258|gb|AEC21592.1| arginyl-tRNA synthetase [Pusillimonas sp. T7-7] Length = 561 Score = 300 bits (767), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 189/580 (32%), Positives = 305/580 (52%), Gaps = 54/580 (9%) Query: 23 KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----V 78 K+ + +++ERP+ AHG ++ N AM L++P +P +A+ IV + +P + Sbjct: 19 KIVPEATATVLLERPKVAAHGDIACNIAMQLAKPARRNPRELAQNIVDALLAEPATQALI 78 Query: 79 DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138 S IAG GFIN L+ + +L +I G YG +L K+ +EFVSANPTGP+HV Sbjct: 79 SSAEIAGPGFINFRLATAARHAVLDAIAQEGARYG-HLSANQQKLMVEFVSANPTGPLHV 137 Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198 GH R A +GD++ L GY+VTRE+Y NDAG QI+ LA+SV R + + + SD P Sbjct: 138 GHSRQAALGDSICRLFTSQGYDVTREFYYNDAGNQIDNLAISVQAR-ARGIEPDASDFPA 196 Query: 199 GYYPGVYLKHVGKEL---ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD---DLKAL 252 Y G Y+ + ++ A ++ ++ + + D V A+ + R+ DL+A Sbjct: 197 DGYKGDYIVDIARDFQAGATVTGTDGVSVTATGNIGSLDDIRVFAVAYLRREQDLDLQAF 256 Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312 ++ D + E + + + L G+ YE + L R Sbjct: 257 GLKFDNYYLESSLY--TTGRVEQTVKALIDAGHTYE----------------NEGALWLR 298 Query: 313 STMV--GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 +T + GDD DR + KS+G YTYF D+AY K+ERGF + I + G+DH G + R+ A Sbjct: 299 TTELGTGDDKDRVMRKSEGGYTYFVPDVAYHVAKWERGFHHAINIQGTDHHGTIARVRAG 358 Query: 371 AAAVSEK--KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428 ++ K +L ++V++ R+G +K+SKRAG ++T+R ++D VG D+VR+ + Sbjct: 359 LQGLNLGIPKDFPAYILHKMVKVVRNGAEVKISKRAGSYVTMRDLIDWVGQDAVRYFLSQ 418 Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLFPRNVI 485 R+ FD +S+ENPV+Y+QYA+AR S+ Q+ ++ P D L Sbjct: 419 RRADSEFVFDIDLALSKSEENPVYYIQYAHARICSMLTQSAELAAQVPQADVSLLTA--- 475 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 +E L+ L+EYP ++ AT P+ LAF+L D A+ FH ++ R Sbjct: 476 -------PTEFALLQRLSEYPAMLALATQELAPHHLAFWLRDCAADFHAWYNAER----- 523 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V ++ +L + RL+L HA ++ +GL ++GV +P M Sbjct: 524 --VLVDDSQLKLARLRLAHATGQVVANGLELLGVSAPERM 561 >gi|300692742|ref|YP_003753737.1| arginyl-tRNA synthetase [Ralstonia solanacearum PSI07] gi|299079802|emb|CBJ52479.1| Arginyl-tRNA synthetase [Ralstonia solanacearum PSI07] Length = 600 Score = 300 bits (767), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 201/601 (33%), Positives = 297/601 (49%), Gaps = 77/601 (12%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87 IV+ERP+ AHG ++ N A+ L++PLG +P +A I I+ D V +V IAG G Sbjct: 30 IVLERPKQAAHGDIACNVALQLAKPLGTNPRELANRIADGIRADARGQRLVSAVEIAGPG 89 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FINL LSP+ +L+++ YG G V +EFVSANPTGP+HVGH R A +G Sbjct: 90 FINLRLSPTARTDVLAAVFAESDRYGAADTHDGAPVLVEFVSANPTGPLHVGHGRQAALG 149 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D LASL+ + G++V RE+Y NDAG QI+ LA+SV R + D+ PE Y G Y+ Sbjct: 150 DALASLLEWQGHKVHREFYYNDAGVQIHNLAVSVQAR-ARGFKPGDAGWPEAAYNGDYIA 208 Query: 208 HV------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 + GK + + + + L ++ ++V + DL+A ++ D + Sbjct: 209 DIAADYLAGKTVRASDGEPVTGARDVENLEAIRRFAVTYLRNEQDIDLQAFGVKFDHYYL 268 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E + ++ +D L G YE L R+T GDD D Sbjct: 269 ESSLYA--DGKVQQTVDALIDAGKTYE----------------QDGALWLRTTDDGDDKD 310 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKA 379 R + KSDGSYTYF D+AY K+ RGF +I V GSDH G + R+ A + K Sbjct: 311 RVMRKSDGSYTYFVPDVAYHTTKWGRGFTQVINVQGSDHHGTIARVRAGLQGLGLGIPKG 370 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV-------------VDEV--------- 417 + +L ++V + +DG +K+SKRAG ++T+R + VD + Sbjct: 371 YPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIEWSNGDAESEAGVDTIRACVESGVP 430 Query: 418 --------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF---- 465 G D+VRF +L RK FD +QS ENPV+YVQYA+AR S+F Sbjct: 431 SWPERFTRGRDAVRFFLLSRKADTEFVFDVDLALKQSDENPVYYVQYAHARICSVFEQWH 490 Query: 466 -RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R+ D+ DL E + L+ +A +P V+ +A P+ +AFY Sbjct: 491 AREGGDVASLAGADL----AAVAGPEASPQAVALVQRIAAFPDVLADAARELAPHAVAFY 546 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 L DLA FH ++ R V ++ + RL L+ A ++ +GL +IGV +P + Sbjct: 547 LRDLAGDFHTFYNADR-------VLVDDDAVKRARLALLAATRQVLRNGLAVIGVSAPQK 599 Query: 585 M 585 M Sbjct: 600 M 600 >gi|222109552|ref|YP_002551816.1| arginyl-tRNA synthetase [Acidovorax ebreus TPSY] gi|254782960|sp|B9MBD2|SYR_DIAST RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|221728996|gb|ACM31816.1| arginyl-tRNA synthetase [Acidovorax ebreus TPSY] Length = 567 Score = 299 bits (766), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 194/588 (32%), Positives = 306/588 (52%), Gaps = 63/588 (10%) Query: 23 KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----V 78 KV R E P+ AHG L+ AAM L++PL +P + E + A ++ P V Sbjct: 18 KVSPGAGSRAAFESPKVAAHGDLACTAAMQLAKPLKQNPRALGEQLQAALEATPAFQKWV 77 Query: 79 DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138 ++ IAG GF+N+ L P+ ++++ ++ G +YG +G KV +EFVSANPTGP+HV Sbjct: 78 QAIEIAGPGFLNIRLKPAAKQQVVREVLAQGAQYGYQ-PARGEKVLVEFVSANPTGPLHV 136 Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ-----QALYNND 193 GH R A +GD ++ L A G+ V RE+Y NDAG QI+TL S R + + D Sbjct: 137 GHGRQAAIGDAISHLYATQGWSVHREFYYNDAGVQIDTLTKSTQLRAKGFKPGDDCWPTD 196 Query: 194 SDLP--EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI---VKDYS--VQAMMKIIR 246 S+ P + +Y G Y+ +++AD + ++ +++ V+DY Q + +R Sbjct: 197 SENPLAKNFYNGDYI----QDIADAFLAKATVQADDRAFTANGDVEDYENIRQFAVAYLR 252 Query: 247 D----DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 + DL+A N+Q D + E + + + L G YE Sbjct: 253 NEQDKDLQAFNLQFDQYYLESSLYAN--GHVDATVQRLVANGKTYE-------------- 296 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 L +ST GDD DR + K DG+YTYF D+AY K++RGF ++ + G+DH G Sbjct: 297 --QDGALWLKSTDYGDDKDRVMRKQDGTYTYFVPDVAYHIQKFQRGFTKVVNIQGTDHHG 354 Query: 363 YVKRLEA--VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 + R+ A AA V + + +L +VR+ R+G +K+SKRAG ++TLR +++ D Sbjct: 355 TIARVRAGLQAADVGIPQGYPDYVLHTMVRVVRNGEEVKISKRAGSYVTLRDLIEWTSKD 414 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI---FRQAKDIFPDLDF 477 +VRF +L RK FD Q+ +NPV+YVQYA+AR S+ +R+ D+ D Sbjct: 415 AVRFFLLSRKPDTEYTFDVDLAVAQNNDNPVYYVQYAHARICSVLRGWREDYDVAALRDV 474 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 DL P PQ L++ LA+YP ++ A P+ + FYL DLA+ +H ++ Sbjct: 475 DLSPLEG-PQAQA-------LMLLLAKYPEMLTAAAAGNAPHDVTFYLRDLAAAYHSYYD 526 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R + ++ + RL LV A A ++++GL ++GV +P M Sbjct: 527 AER-------ILVDDEAVKQARLALVAATAQVLHNGLAVLGVSAPARM 567 >gi|148270771|ref|YP_001245231.1| arginyl-tRNA synthetase [Thermotoga petrophila RKU-1] gi|166200584|sp|A5IN82|SYR_THEP1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|147736315|gb|ABQ47655.1| arginyl-tRNA synthetase [Thermotoga petrophila RKU-1] Length = 546 Score = 299 bits (766), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 188/557 (33%), Positives = 289/557 (51%), Gaps = 41/557 (7%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 IE P G LSTNAAM L++ L +P IA+ IV + DP D + I G GFIN +L Sbjct: 26 IEIPPKKEFGDLSTNAAMKLAKTLKKNPREIAQEIVKSLDEDPSFDRIEIMGPGFINFFL 85 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 S LR ++ +++ EYGR G G K+ E+ SANPTGP VGH R ++GD L+ + Sbjct: 86 SNELLRGVVKTVLERKDEYGRENTGNGVKIQFEYGSANPTGPFTVGHGRQIIIGDVLSEV 145 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 GY+VTRE YINDAG QI LA S++ RY Q L + ++PEG Y G YL + ++L Sbjct: 146 FKELGYDVTREMYINDAGKQIKLLAQSLWARYNQ-LLGVEKEIPEGGYRGEYLVDIARDL 204 Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273 + + + E+ + K ++ ++ ++D L+ + D++ SE + + Sbjct: 205 VSEIGDKYKDLWNEEVEELFKQTALNRILSSMKDTLEKIGSSFDVYFSEKSLI--EDGTV 262 Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333 +++ L + VYE D L S + D+ D+ L++SDG+YTY Sbjct: 263 EEVLKLLKDRDVVYE---------------KDGAVWLKVSAFI-DEEDKVLVRSDGTYTY 306 Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393 F D+AY KY+RGF + + GSDH G++ R++A A+ NV+L + V L R Sbjct: 307 FMTDIAYHYKKYKRGFRKVYDIWGSDHHGHIPRMKAAMKALDIPDDFFNVILHQFVTLKR 366 Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453 D ++MS RAG+F+TL ++DEVG D+VR+ + + FD K +S +NPV+Y Sbjct: 367 DDEIVRMSTRAGEFVTLDELLDEVGRDAVRYFFAMVDPNTHMVFDIDLAKAKSMDNPVYY 426 Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF-----DTSELQLIVHLAEYPRV 508 VQYA+AR ++F A+ + V +E + + E L+ +L + V Sbjct: 427 VQYAHARIYNLFSNAE-----------KKGVKFEEGKHLELLGNEEERVLMRNLGMFNTV 475 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 ++ P +L YL LA FH ++ + V N +L+ RL L A Sbjct: 476 LKEVAQMFAPNRLTNYLQSLAESFHAFYT------KHVIVDPENPELSNARLNLALATGI 529 Query: 569 IINSGLNIIGVESPNEM 585 ++ GL +IGV +P M Sbjct: 530 VLRKGLKLIGVSAPERM 546 >gi|283782705|ref|YP_003373459.1| arginine--tRNA ligase [Gardnerella vaginalis 409-05] gi|283441291|gb|ADB13757.1| arginine--tRNA ligase [Gardnerella vaginalis 409-05] Length = 598 Score = 299 bits (766), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 187/596 (31%), Positives = 313/596 (52%), Gaps = 72/596 (12%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 +++ + RP+D AHG +TN AM L++ G+ P +AEL R++ + V +AG GFI Sbjct: 35 EKLAVMRPKDRAHGDWATNVAMQLAKKAGMKPRDLAELFAERLQEAEGIARVEVAGPGFI 94 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N+ L + ++ ++ G +G+N G +N+EFVSANPTGP+H+G R A VGD+ Sbjct: 95 NITLDSASAAAVVDEVLKQGAAFGKNTHLSGKTLNLEFVSANPTGPIHIGGTRWAAVGDS 154 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 +A ++ +G +V REYY ND G QIN A S+ A + ++ P Y G Y+ + Sbjct: 155 MARVLEANGAKVVREYYFNDHGEQINRFAKSLV----AAAHGEET--PADGYKGAYINEI 208 Query: 210 GKEL---ADKYSSELLNFP------EEKWLPI----------VKDYSVQAMMKIIRDDLK 250 + A+ ++L+ P +E+ LP+ + +V M IR ++ Sbjct: 209 ADSVIKEANADGVDVLSLPRIDLGKDEEGLPLGEGDSEQREEFRKRAVPMMFAEIRKSMR 268 Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310 + D++ E+ + + + I +L +G ++E K T Sbjct: 269 DFRVSFDVWFHENSLY--EDGEVERAIADLRERGDIFE------KDGAT----------W 310 Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG---FDNMIYVMGSDHSGYVKRL 367 F ST GDD DR ++KSDG+Y YFAAD+AY++ K R D IY++G+DH GY+ R+ Sbjct: 311 FESTKHGDDKDRVIIKSDGNYAYFAADIAYYRNKRHREQNPADVAIYMLGADHHGYIGRM 370 Query: 368 EAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 A+ AA +K + + +L+ +LV + +DG P++MSKRAG+ IT+ +VD +G D+ R+ + Sbjct: 371 MAMCAAFGDKPGENMQILIGQLVNVMKDGKPVRMSKRAGNVITIDDLVDAIGVDASRYSL 430 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVI 485 + +D D + S +NPV+YVQYA+AR ++ R A D D DL N Sbjct: 431 ARTDYNTSVDIDLDLLASHSNDNPVYYVQYAHARSCNVARNAADAGITQDGADLSLLNT- 489 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR----- 540 ++ +++ LA++P + A + P+++A YL DLA+ +H ++ R Sbjct: 490 -------ETDGEVLAALAQWPAALAQAGDLRAPHRVAHYLEDLAASYHKWYNLERVVPME 542 Query: 541 -ENPRLRFVQANNRKLTM----------MRLQLVHAVASIINSGLNIIGVESPNEM 585 +P R +A + RL+L AV ++I +GL+++GV +P +M Sbjct: 543 LTDPENRLPEAEREAQRIAKCPEPARAAARLKLNAAVRTVIATGLDLLGVSAPEKM 598 >gi|7476032|pir||T09994 arginine-tRNA ligase (EC 6.1.1.19) - Mycobacterium leprae gi|699338|gb|AAA63099.1| argS [Mycobacterium leprae] Length = 687 Score = 299 bits (766), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 194/593 (32%), Positives = 298/593 (50%), Gaps = 58/593 (9%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LK + + ++ L + V +ERPR+ HG S+N AM L + +G +PL Sbjct: 141 ADLAELLKTTAIVVLAERGLDAAALPQTVTVERPRNPEHGDYSSNLAMQLGKKVGANPLE 200 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + + V +AG GFIN+ L S I+++++ + +G + G ++ Sbjct: 201 LAGWLAEVLAQAGGIADVEVAGPGFINMRLDASAQAMIVNTVINADKNFGHSDDLAGYQI 260 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L++ G V REYY ND GAQ++ S+ Sbjct: 261 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGAAVVREYYFNDHGAQVDRFTNSLIA 320 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + L D Y G Y+ + ++ + + L+ PE + V++ V M Sbjct: 321 AAKGELTPADG------YAGTYVTDIAAQVMQQ-APYALSLPESEMHETVREIGVDLMFT 373 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L D++ ED H + + I L G VYE Sbjct: 374 HIKKSLHEFGTDFDVYTHEDSMHA--SGRVDEAIARLRDTGNVYE--------------- 416 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 L R++ GDD DR ++KSDG Y A DLAY+ K +RGFD IY++G+DH GY Sbjct: 417 -KDGALWLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHGY 475 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA + A + VL+ ++V L DG ++MSKR+G+ ITL +V+ +G D+ R Sbjct: 476 IARLKAAAAAFGDDPAIVEVLIGQMVNLVCDGQLVRMSKRSGNVITLDDLVEAIGVDAAR 535 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D S ENPV+YVQYA+AR ++ R A +F L P Sbjct: 536 YSLIRSSVDTPIDIDLALWSSSSNENPVYYVQYAHARLSALARNAA------EFGLIP-- 587 Query: 484 VIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 DT L+L+ H + E+P+V++ A +EP+++ YL DLA +H Sbjct: 588 --------DTGHLELLSHDKEGALLRTVGEFPQVLKTAAALREPHRVCRYLEDLAGDYHR 639 Query: 535 HWSHGRENPRLRFVQANNR--KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R P Q + + L RL L A +I +GL I+GV +P M Sbjct: 640 FYDSCRVLP-----QGDEKPTDLHTARLALCQANRQVIANGLAILGVSAPERM 687 >gi|256833012|ref|YP_003161739.1| arginyl-tRNA synthetase [Jonesia denitrificans DSM 20603] gi|256686543|gb|ACV09436.1| arginyl-tRNA synthetase [Jonesia denitrificans DSM 20603] Length = 558 Score = 299 bits (765), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 187/561 (33%), Positives = 291/561 (51%), Gaps = 39/561 (6%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 D I +ERPR HG +TN A+ L++ G P +A+ + AR++ + V +AG GF+ Sbjct: 32 DMIHVERPRQRDHGDWATNVALQLAKKAGQPPRVLADALAARLQEQAGIARVDVAGPGFL 91 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N+ L + ++ +IV +G EYGR+ + G +N+EFVSANPTGP+H+G R A VGD+ Sbjct: 92 NITLDTAAAGELARTIVEAGGEYGRSAVRAGRTINLEFVSANPTGPIHIGGTRWAAVGDS 151 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 LA ++ +G V +EYY ND GAQI+ A S+ Q +PE Y G Y+ + Sbjct: 152 LARILQATGAHVVKEYYFNDHGAQIDRFARSLVASAQGL------PVPEDGYGGQYIHDI 205 Query: 210 GKELADKYSSE---LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 +++ ++E +L + V+ M I+ L + D++ E+ H Sbjct: 206 AQQVLALAAAEGIDVLGLDPADTQEFFRARGVELMFGQIKQSLHDFGVDFDVYFHEN--H 263 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 + + I L G+++E R+T GDD DR ++K Sbjct: 264 LYESGEVDKAIAKLRDNGHIFE----------------QDGATWLRTTTFGDDKDRVVIK 307 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK-KAQINVLL 385 SDG Y A D+AY+ K ERG D ++ ++G+DH GY+ RL AV AA + + VL+ Sbjct: 308 SDGDAAYIAGDIAYYLNKRERGSDEVVIMLGADHHGYIGRLMAVCAAFGDTPHTNLEVLI 367 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 ++V L +DG P++MSKRAG +TL +VD VG D+ R+ + + +D D + + Sbjct: 368 GQMVNLVKDGEPLRMSKRAGTVVTLEDLVDIVGVDAARYALARSSVDQSIDIDLDVLAKA 427 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI-PQESEFDTSELQLIVHLAE 504 S +NPVFYVQYA+AR ++ R A D P + P E+E LI L E Sbjct: 428 SNDNPVFYVQYAHARTANVARNAAAAGVHRDDAFDPATLSHPTETE-------LIGRLTE 480 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 YPR++E A +E +++A Y LA +H +S R P L + + T RL L Sbjct: 481 YPRIVEQAAQLREQHRVARYAEALAGAYHKWYSECRVTP-LSGAEVTDTHRT--RLWLND 537 Query: 565 AVASIINSGLNIIGVESPNEM 585 A ++ + L+++GV +P M Sbjct: 538 ATGQVLRNALSLLGVSAPERM 558 >gi|121607568|ref|YP_995375.1| arginyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2] gi|121552208|gb|ABM56357.1| arginyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2] Length = 569 Score = 299 bits (765), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 191/582 (32%), Positives = 296/582 (50%), Gaps = 65/582 (11%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGK 86 + +E P+ AHG + AA+ L++ L ++P +AE + + + P V + IAG Sbjct: 26 KAALESPKVAAHGDFACTAALQLAKTLHMNPRQMAEKLRSALLATPAFQRWVSDIDIAGP 85 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GFIN+ L P+ + ++S ++ +G +G G +V +EFVSANPTGP+HVGH R A + Sbjct: 86 GFINIRLKPAARQAVVSEVLAAGAHFGCQPP-NGQRVLVEFVSANPTGPLHVGHGRQAAL 144 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ-----QALYNNDSDLP--EG 199 GD + L A G++V RE+Y NDAGAQI TLA S R + A + D D P G Sbjct: 145 GDAICKLFATQGWQVHREFYYNDAGAQIQTLAHSTRLRAKGFKPGDACWPTDPDDPASRG 204 Query: 200 YYPGVYLKHVGKEL-------ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252 +Y G Y++ + + AD S ++ L ++ ++V + DL+A Sbjct: 205 FYNGDYIQDIANDFLAQKTVQADDRSFTASGDVDD--LESIRQFAVAYLRNEQDKDLRAF 262 Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312 N+Q D + E + + ++ L G YE L R Sbjct: 263 NLQFDEYYLESSLYTS--GRVEAAVNRLIANGKTYE----------------RDGALWLR 304 Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--V 370 ST GDD DR + K DGSYTYF D+AY K+ERG+ ++ V G+DH G + R+ A Sbjct: 305 STDYGDDKDRVMRKQDGSYTYFVPDVAYHIAKWERGYAKVVNVQGTDHHGTIARVRAGLQ 364 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430 AA V + +L +VR+ + G +K+SKRAG ++TLR +++ D+VRF +L RK Sbjct: 365 AADVGIPPGYPDYVLHTMVRVVKGGQEVKISKRAGSYVTLRELIEWTSRDAVRFFLLSRK 424 Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD-------IFPDLDFDLFPRN 483 FD Q+ +NPV+YVQYA+AR S+ R D + D L Sbjct: 425 PDTEYSFDVDLAVAQNNDNPVYYVQYAHARICSVLRSWADQGGGDMAVLRAADLSLLD-- 482 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 D L++ L +YP ++ AT +Q P+ ++FYL DLA+ +HG++ R Sbjct: 483 --------DPQAQALMLQLGKYPAMLTAATASQAPHDVSFYLRDLAASYHGYYDAQR--- 531 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + ++ RL LV A A ++++GL ++GV +P M Sbjct: 532 ----ILVADERVKHARLALVSATAQVLHNGLAVLGVSAPARM 569 >gi|170698554|ref|ZP_02889624.1| arginyl-tRNA synthetase [Burkholderia ambifaria IOP40-10] gi|170136559|gb|EDT04817.1| arginyl-tRNA synthetase [Burkholderia ambifaria IOP40-10] Length = 593 Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 203/616 (32%), Positives = 314/616 (50%), Gaps = 67/616 (10%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L AD +++ + LK D + I +ERP+ AHG ++ N AM L++PLG +P Sbjct: 12 LLADSVTQVAHALKGADSAF-----VAPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66 Query: 63 TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +AE IVA + P VD+ IAG GFINL L+ + + +++++ G +G + Sbjct: 67 QLAEKIVAALTAQPAAQGLVDAAEIAGPGFINLRLTAAAKQAVIAAVFEQGRAFGTSDRE 126 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA Sbjct: 127 KGKQVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE------LADKYSSELLNFPEEKWLPI 232 +S R + L D+ PE Y G Y+ + ++ +A K + + L Sbjct: 187 ISTQAR-ARGLKPGDAGWPEAAYNGEYIADIARDYLNRETVAAKDGEPVTGAGDIDDLDA 245 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + DL+A ++ D + E + + +D L + G YE Sbjct: 246 IRKFAVAYLRHEQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALVKAGMTYE---- 299 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L R+T GDD DR + KSDG+YTYF D+AY K+ERGF + Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTQV 347 Query: 353 IYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 I + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+ Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKLSKRAGSYVTV 407 Query: 411 R-----------------HVVDEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 R ++DE G D+VRF ++ RK FD +Q+ EN Sbjct: 408 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 PV+YVQYA+AR S+ + K + ++D P + Q + + L+ LAEYP ++ Sbjct: 468 PVYYVQYAHARICSVLNELKSRY-NVDVAQLPGADLSQLTS--PQAVSLMQKLAEYPDML 524 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 +A P+ +AFYL DLA FH ++ R V ++ R L+ A + Sbjct: 525 THAAKELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577 Query: 570 INSGLNIIGVESPNEM 585 + +GL ++GV +P +M Sbjct: 578 LENGLAVLGVSAPAKM 593 >gi|254251280|ref|ZP_04944598.1| Arginyl-tRNA synthetase [Burkholderia dolosa AUO158] gi|124893889|gb|EAY67769.1| Arginyl-tRNA synthetase [Burkholderia dolosa AUO158] Length = 593 Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 201/616 (32%), Positives = 311/616 (50%), Gaps = 67/616 (10%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L AD ++ + LK D + I +ERP+ AHG ++ N AM L++PLG +P Sbjct: 12 LLADSVKQVAHALKGADAAF-----VPPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66 Query: 63 TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +AE IVA + P V++ IAG GFINL L+ + + ++ ++ G +G + Sbjct: 67 QLAEQIVAAVNAHPAAQGLVEAAEIAGPGFINLRLTAAAKQAVIGAVFAQGSAFGTSDRE 126 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA Sbjct: 127 KGKRVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE------LADKYSSELLNFPEEKWLPI 232 +S R + L D+ PE Y G Y+ + ++ +A K + + L Sbjct: 187 ISTQAR-ARGLKPGDAGWPEAAYNGEYIADIARDYMNCETVAAKDGEPVKGAGDVDDLDA 245 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + DL+A ++ D + E + + +D L + G YE Sbjct: 246 IRKFAVAYLRHEQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALIKAGMTYE---- 299 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L R+T GDD DR + KSDG+YTYF D+AY K+ERGF + Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTKV 347 Query: 353 IYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 I + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+ Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTV 407 Query: 411 R-----------------HVVDEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 R ++DE G D+VRF ++ RK FD +Q+ EN Sbjct: 408 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 PV+YVQYA+AR S+ + + + + D P + Q + + L+ LAEYP ++ Sbjct: 468 PVYYVQYAHARICSVLNEWQSRY-NGDLAQLPHADLSQLTSAQAAS--LMQKLAEYPDML 524 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 +A P+ +AFYL DLA FH ++ R V ++ R L+ A + Sbjct: 525 THAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577 Query: 570 INSGLNIIGVESPNEM 585 + +GL ++GV +P +M Sbjct: 578 LANGLAMLGVSAPAKM 593 >gi|283768735|ref|ZP_06341646.1| arginine--tRNA ligase [Bulleidia extructa W1219] gi|283104521|gb|EFC05894.1| arginine--tRNA ligase [Bulleidia extructa W1219] Length = 552 Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 178/555 (32%), Positives = 297/555 (53%), Gaps = 32/555 (5%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90 +++E PRD + G STN AM L++ L P+ IAE +V +K P+ S+ GFIN Sbjct: 29 LMVEEPRDRSKGDYSTNVAMRLAKVLHKAPIVIAEELVNDLKNTLPEASSIEFVKPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + L +I++S++ +G +YG N G G + +E+VSANPTG +H GH R A GD + Sbjct: 89 FRIKREVLFEIINSVLKAGDKYGENTSGAGKNILVEWVSANPTGDLHCGHARNAAWGDCI 148 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++L+ SGY RE+YINDAG QI+ L S+ RY + L D LPE Y +K++ Sbjct: 149 SNLLEKSGYNCLREFYINDAGHQIDMLGESLVARYFEWL-GKDYPLPEDGYHAEDVKNIA 207 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 KE+ ++ + L ++ L K + +K I DL + ++ E F+ + Sbjct: 208 KEILEEEGDKWLETDPKERLEHFKLVGKKKELKKIERDLALYRVHFQSWMPESFFYENNM 267 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I ++D + + YE L F++T GDD DR L KSDGS Sbjct: 268 ERINAVLDKMDKMNLTYE----------------KDGALWFKATEYGDDKDRVLRKSDGS 311 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 +Y D+A K ERG+++++ + G+DH YV R++ A+ + ++V + ++VR Sbjct: 312 LSYLTPDIANHVYKVERGYEHLVNLWGADHHSYVTRMKLALKALGYPEGTLDVDIIQMVR 371 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 + DG +KMSKR G+ ITLR + ++VG D+ R+ + + + +DFDF +++ NP Sbjct: 372 MVEDGQEVKMSKRTGNAITLRELCEDVGVDAARWFFVAKDVASHMDFDFNLARKKDNNNP 431 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+Y QYAY R SI R+ +D+ D F R + EL L+ ++E+P+++ Sbjct: 432 VYYCQYAYTRMSSILRK-EDLPAFKPTDDFSRLT-------NEKELYLMKLMSEFPKLVA 483 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A ++P K+ Y+ DLA +H ++ + N ++ +LT R+ L+ A+ + Sbjct: 484 DAARLRKPNKVTEYILDLAKTYHSYYGMAKVN------NLDDPELTNQRIGLLKALQITL 537 Query: 571 NSGLNIIGVESPNEM 585 + ++GVE+ +M Sbjct: 538 KNAFALVGVEALEQM 552 >gi|107023852|ref|YP_622179.1| arginyl-tRNA synthetase [Burkholderia cenocepacia AU 1054] gi|116690937|ref|YP_836560.1| arginyl-tRNA synthetase [Burkholderia cenocepacia HI2424] gi|170734267|ref|YP_001766214.1| arginyl-tRNA synthetase [Burkholderia cenocepacia MC0-3] gi|254247060|ref|ZP_04940381.1| Arginyl-tRNA synthetase, class Ic [Burkholderia cenocepacia PC184] gi|123071911|sp|Q1BT49|SYR_BURCA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|166232763|sp|A0KAZ0|SYR_BURCH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|238688616|sp|B1JZC6|SYR_BURCC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|105894041|gb|ABF77206.1| arginyl-tRNA synthetase [Burkholderia cenocepacia AU 1054] gi|116649026|gb|ABK09667.1| arginyl-tRNA synthetase [Burkholderia cenocepacia HI2424] gi|124871836|gb|EAY63552.1| Arginyl-tRNA synthetase, class Ic [Burkholderia cenocepacia PC184] gi|169817509|gb|ACA92092.1| arginyl-tRNA synthetase [Burkholderia cenocepacia MC0-3] Length = 593 Score = 298 bits (764), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 203/616 (32%), Positives = 314/616 (50%), Gaps = 67/616 (10%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L AD ++ + LK D + I +ERP+ AHG ++ N AM L++PLG +P Sbjct: 12 LLADSVKQVAHALKGADAAF-----VAPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66 Query: 63 TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +AE IVA + P V++ IAG GFINL LS + + +++++ G +G + Sbjct: 67 QLAEQIVAALTAQPAAQGLVEAAEIAGPGFINLRLSAAAKQAVIAAVFEQGRAFGTSDRE 126 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA Sbjct: 127 KGKQVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPI 232 +S R + L D+ PE Y G Y+ + G+ +A + + + L Sbjct: 187 ISTQAR-ARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVKGTGDVEDLDA 245 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + + DL+A ++ D + E + + +D L + G YE Sbjct: 246 IRKFAVTYLRREQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALVKAGMTYE---- 299 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L R+T GDD DR + KSDG+YTYF D+AY K+ERGF + Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTKV 347 Query: 353 IYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 I + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+ Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTV 407 Query: 411 R-----------------HVVDEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 R ++DE G D+VRF ++ RK FD +Q+ EN Sbjct: 408 RDLIEWSGGAAAGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 PV+YVQYA+AR S+ + K + ++D P + Q + + L+ LAEYP ++ Sbjct: 468 PVYYVQYAHARICSVLNELKSRY-NVDVAQLPGADLSQLTSAQAAS--LMQKLAEYPDML 524 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 +A P+ +AFYL DLA FH ++ R V ++ R L+ A + Sbjct: 525 THAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577 Query: 570 INSGLNIIGVESPNEM 585 + +GL ++GV +P +M Sbjct: 578 LENGLAVLGVSAPAKM 593 >gi|218960696|ref|YP_001740471.1| Arginyl-tRNA synthetase 1 (Arginine--tRNA ligase 1) (ArgRS 1) [Candidatus Cloacamonas acidaminovorans] gi|167729353|emb|CAO80264.1| Arginyl-tRNA synthetase 1 (Arginine--tRNA ligase 1) (ArgRS 1) [Candidatus Cloacamonas acidaminovorans] Length = 549 Score = 298 bits (764), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 183/579 (31%), Positives = 309/579 (53%), Gaps = 42/579 (7%) Query: 12 KNYLKEID-CKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 KN ++ +D K+ EK+ +E P + G STNAA++L + + P +A+ IV Sbjct: 8 KNIVEALDNLKLNHEKEF----TVEIPNNPEFGDYSTNAALVLGKENKMKPKDLADKIVK 63 Query: 71 RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130 +K + + IAG GFIN +LSPS +++ I S +YG++ G K+ +EFVSA Sbjct: 64 ELKKNKAYKKLEIAGPGFINFFLSPSLYQQVFWEIYKSE-DYGKSDFGNQEKILLEFVSA 122 Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190 NPTGP+++ R A GDTL +M + GY RE+YINDAG Q++ LA S+ R ++ Sbjct: 123 NPTGPLNIVSARAAAFGDTLYRIMKYVGYAPAREFYINDAGNQVDILAESLELRLREIHG 182 Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250 + P Y G Y+KH+ L + + PE+ L +K++++ ++++ R+ L+ Sbjct: 183 EKIGEFPYEAYHGEYVKHLAHRLNALEGTRVFMLPEKDRLEHLKEFALSELLEMQRNSLE 242 Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK-CDMDRKQ- 308 + + ++SE EG++ S T+ C +++ Sbjct: 243 KFGVVFEGWVSEKALRA--------------------EGVVEEVLSYLTEADCTYEKEDA 282 Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368 + F ST GDD DR L+KSDGS TYF D+AY K +RGF +I + G DH GYV R+ Sbjct: 283 IWFNSTKYGDDKDRVLMKSDGSITYFVPDVAYHLTKIQRGFTKLIDIFGPDHHGYVPRIR 342 Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428 A A++ + + + + V ++ G +KMSKRAG +T+ ++ VG D+ R+ + Sbjct: 343 AAFRALNYDDSILEFIFLQQVNIFESGERVKMSKRAGKIVTMDDLISVVGKDAARYFFIA 402 Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD--IFPDLDFDLFPRNVIP 486 RK + L+FD +++ ENPV+Y QYA+AR SI ++A+ I+P F + +I Sbjct: 403 RKANAHLNFDLELALKKNNENPVYYCQYAHARICSIIKKARSEKIYP----KHFKKEMIK 458 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 + ++ EL LI +A+ P ++ + +EP++L Y+ +LAS+ H ++ + + Sbjct: 459 KLNK--PEELALIQKMADLPELLILIAVHREPHRLTTYIEELASLLHHYYE------KYQ 510 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V N L+ RL L++ V ++ ++G+ +P M Sbjct: 511 IVNVKNLALSQARLMLLYTVRKVMQICFELMGISAPETM 549 >gi|186474957|ref|YP_001856427.1| arginyl-tRNA synthetase [Burkholderia phymatum STM815] gi|238691324|sp|B2JKJ2|SYR_BURP8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|184191416|gb|ACC69381.1| arginyl-tRNA synthetase [Burkholderia phymatum STM815] Length = 594 Score = 298 bits (764), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 193/611 (31%), Positives = 313/611 (51%), Gaps = 65/611 (10%) Query: 11 LKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 L + +K++ + E + I I +ERP+ AHG ++ N AM L++P+ +P +A+ Sbjct: 13 LTDVVKQVAQATQGESEAAFIAPAITLERPKVAAHGDVACNVAMQLAKPMRANPRQLAQQ 72 Query: 68 IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 IV + DP VD +AG GFINL LS + + +++++ +GR+ G +V Sbjct: 73 IVDALLADPLAKGLVDGAEVAGPGFINLRLSAASKQAVIAAVFAQREAFGRSQREAGKRV 132 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EFVSANPTGP+HVGH R A +GD +++++A G++V RE+Y NDAG QI LA+S Sbjct: 133 LVEFVSANPTGPLHVGHGRQAALGDAMSNVLASQGFDVHREFYYNDAGVQIGNLAISTQA 192 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPIVKDYS 237 R + L D PE Y G Y+ + G+ ++ + + + L ++ ++ Sbjct: 193 R-ARGLKPGDPGWPEAAYNGEYIADIARDYLNGETVSASDGEPVKGAGDVEDLEAIRRFA 251 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 V + DL+A ++ D + E ++ + ++ L G YE Sbjct: 252 VAYLRHEQDMDLQAFGVKFDQYYLESSLYK--EGRVEKTVNELIAAGKTYE--------- 300 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 L R+T GDD DR + KSDG+YTYF D+AY + K+ERGF +I + G Sbjct: 301 -------QEGALWLRTTDDGDDKDRVMRKSDGTYTYFVPDVAYHETKWERGFTKVINIQG 353 Query: 358 SDHSGYVKRLEA--VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 SDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+R +++ Sbjct: 354 SDHHGTIARVRAGLQGLGIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVRDLIE 413 Query: 416 ---------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454 G D+VRF ++ RK FD +Q+ ENPV+YV Sbjct: 414 WSGGAVPGQEAAPDLLDEETIRRGRDAVRFFLISRKADTEFVFDVDLALKQNDENPVYYV 473 Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514 QYA+AR S+ + K + + L ++ P +SE T+ LQ LAE+P ++ +A Sbjct: 474 QYAHARICSVINEWKSRYGADETGLPVVDLSPLDSERATALLQ---KLAEFPDMLTHAAG 530 Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 P+ +AFYL DLA FH ++ R V ++ R+ L+ A ++ +GL Sbjct: 531 ELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAQRNARIALLAATRQVLANGL 583 Query: 575 NIIGVESPNEM 585 +IGV +P +M Sbjct: 584 AVIGVSAPAKM 594 >gi|149927068|ref|ZP_01915326.1| arginyl-tRNA synthetase [Limnobacter sp. MED105] gi|149824289|gb|EDM83509.1| arginyl-tRNA synthetase [Limnobacter sp. MED105] Length = 579 Score = 298 bits (764), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 196/588 (33%), Positives = 301/588 (51%), Gaps = 71/588 (12%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87 + +E+P+D +HG ++ N AM L++P +P +A+L+ +K +P VD+V IAG G Sbjct: 29 VTLEKPKDASHGDVACNLAMQLAKPAKRNPRELAQLLADHVKANPACVSLVDAVDIAGPG 88 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FIN+ LS + +++ ++ G E+G++ G V IEFVSANPTGP+HVGH R A +G Sbjct: 89 FINIRLSQNARVAVVAQVLEQGTEFGKSGAHAGETVLIEFVSANPTGPLHVGHGRQAALG 148 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D +A++M G++V +E+Y NDAG QI TLA SV R + L D + PE Y G Y+ Sbjct: 149 DAMAAVMQTQGWKVHKEFYYNDAGVQIQTLATSVQAR-AKGLKPGDVEWPESAYNGDYIA 207 Query: 208 HV------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD-DLKALNIQHDIFI 260 + GKE+ + ++ ++V A ++ +D DLKA + D F Sbjct: 208 DIAEDFLAGKEVKAADGEPVKGTGNVDDFECIRAFAV-AYLRAEQDLDLKAFGVNFDQFY 266 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 E + + + + G +E + L RST GDD Sbjct: 267 LESSLY--SEGKVEAAVALMVASGKTFE----------------EGGALWLRSTDYGDDK 308 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKK 378 DR + KS+G YTYF D+AY K++RGF +I + G+DH G + R+ A A V + Sbjct: 309 DRVMRKSEGGYTYFVPDVAYHIQKFKRGFGKVINIQGTDHHGTIARVRAGLQACNVGIPQ 368 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV------VDEV------------GSD 420 + +L ++V + + G +K+SKRAG ++T+R + VDE G D Sbjct: 369 GYPDYVLHKMVTVMKGGQEVKISKRAGSYVTVRDLICWSGGVDETQPMLSQPEALTKGRD 428 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK---DIFPDLDF 477 +VRF ++ RK FD QS ENPV+YVQYA+AR SI QA+ D Sbjct: 429 AVRFFLVSRKADTEFVFDVDLALAQSDENPVYYVQYAHARIHSILDQAEVDLSTIHGADL 488 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 L SEL L+ L YP ++ A P+ +AFYL +LA FH ++ Sbjct: 489 TLLAA----------PSELALLRTLVSYPDILSKAAEELAPHHIAFYLRELAGAFHTFYN 538 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R V+ ++ L R+ L+ AVA+++++GL ++GV +P M Sbjct: 539 AER-------VRIDDMALKTARVGLLVAVATVLSNGLAVLGVSAPKRM 579 >gi|183602799|ref|ZP_02964162.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis HN019] gi|241191434|ref|YP_002968828.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196840|ref|YP_002970395.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218037|gb|EDT88685.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis HN019] gi|240249826|gb|ACS46766.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251394|gb|ACS48333.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295794427|gb|ADG33962.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis V9] Length = 590 Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 187/597 (31%), Positives = 307/597 (51%), Gaps = 76/597 (12%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 + + RP+D AHG ++NAAM L++ G+ P +A+L + + +V +AG GFIN Sbjct: 28 KFAVMRPKDRAHGDWASNAAMQLAKKAGMKPRDLAQLFADALNGTDGIAAVEVAGPGFIN 87 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + L + ++ ++ G +G+N G +N+EFVSANPTGP+H+G R A VGD++ Sbjct: 88 ITLDSASAAAVVDQVLDEGNRFGKNNHLSGKTLNLEFVSANPTGPIHIGGTRWAAVGDSM 147 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A ++ +G V REYY ND G QIN A S+ +D P Y G Y+ + Sbjct: 148 ARILQANGATVVREYYFNDHGEQINRFAKSLV------AAAHDEPTPVDGYKGAYIDEIA 201 Query: 211 KEL---ADKYSSELLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDLKA 251 + + A+ ++LN P +EK P+ + S Q M IR +K Sbjct: 202 RRVIVEANAEGIDILNLPRVDGGTDEKGEPLGEGDSEQREEFRKRAVPMMFDEIRQSMKE 261 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 + D++ E+ + + + I +L G +YE K T F Sbjct: 262 FRVHFDVWFHENSLY--EDGEVEKAIADLRNAGDIYE------KDGAT----------WF 303 Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKRLE 368 ST GDD DR ++KSDG+Y YFAAD+AY++ K R D IY++G+DH GY+ R+ Sbjct: 304 ESTEHGDDKDRVIIKSDGTYAYFAADIAYYRNKRHRKTDPADVAIYMLGADHHGYIGRMM 363 Query: 369 AVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 A+ AA +K + + +L+ ++V + +DG P++MSKRAG+ +T+ ++D +G D+ R+ + Sbjct: 364 AMCAAFGDKPGENMQILIGQMVNVMKDGKPVRMSKRAGNIVTIDDLIDAIGVDASRYSLA 423 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLFPRNV 484 + +D D + S +NPV+YVQYA+AR ++ R A+ D D L Sbjct: 424 RTDYNSPVDIDLNLLASHSNDNPVYYVQYAHARSCNVDRNAEAAQINAADADLSLL---- 479 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP- 543 ++E D ++I LA++P ++ A + P+++A YL DLA+ +H ++ R P Sbjct: 480 ---DTEADG---EVIAALAQWPALLTLAGDLRAPHRIAHYLEDLAAAYHKWYNVERVVPM 533 Query: 544 ---------------RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R R + RL+L AV ++I GL+++GV +P++M Sbjct: 534 PLTEAEERADEQTRERTRIAKNPEPARAAARLKLNDAVQTVIAEGLDLLGVTAPDKM 590 >gi|297243030|ref|ZP_06926968.1| arginyl-tRNA synthetase [Gardnerella vaginalis AMD] gi|296889241|gb|EFH27975.1| arginyl-tRNA synthetase [Gardnerella vaginalis AMD] Length = 598 Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 188/596 (31%), Positives = 313/596 (52%), Gaps = 72/596 (12%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 +++ + RP+D AHG +TN AM L++ G+ P +AEL ++ + SV +AG GFI Sbjct: 35 EKLAVMRPKDRAHGDWATNVAMQLAKKAGMKPSDLAELFAESLQEAEGIASVEVAGPGFI 94 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N+ L + ++ ++ G ++G+N G +N+EFVSANPTGP+H+G R A VGD+ Sbjct: 95 NITLDSASAAAVVDEVLKQGADFGKNTHLSGKTLNLEFVSANPTGPIHIGGTRWAAVGDS 154 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 +A ++ +G +V REYY ND G QIN A S+ A + ++ P Y G Y+ + Sbjct: 155 MARVLEANGAKVVREYYFNDHGEQINRFAKSLV----AAAHGEET--PADGYKGAYINEI 208 Query: 210 GKEL---ADKYSSELLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDLK 250 + A ++L+ P +E+ LP+ + S Q M IR ++ Sbjct: 209 ADAVIKEAQADGVDVLSLPRIDLGKDEEGLPLGEGDSEQREEFRKRAVPMMFAEIRKSMR 268 Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310 + D++ E+ + + + I +L +G ++E K T Sbjct: 269 DFRVDFDVWFHENSLY--EDGEVERAIADLRSRGDIFE------KDGAT----------W 310 Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG---FDNMIYVMGSDHSGYVKRL 367 F ST GDD DR ++KSDG+Y YFAAD+AY++ K R D IY++G+DH GY+ R+ Sbjct: 311 FESTKHGDDKDRVIIKSDGNYAYFAADIAYYRNKRHREQNPADVAIYMLGADHHGYIGRM 370 Query: 368 EAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 A+ AA +K + + +L+ +LV + +DG P++MSKRAG+ IT+ +VD +G D+ R+ + Sbjct: 371 MAMCAAFGDKPGENMQILIGQLVNVMKDGKPVRMSKRAGNVITIDDLVDAIGVDASRYSL 430 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVI 485 + +D D + S +NPV+YVQYA+AR ++ R A D D DL N Sbjct: 431 ARTDYNTSVDIDLDLLASHSNDNPVYYVQYAHARSCNVARNAADAGITQDGADLSLLNT- 489 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR----- 540 ++ +++ LA++P + A + P+++A YL DLA+ +H ++ R Sbjct: 490 -------EADGEVLAALAQWPAALAQAGDLRAPHRVAHYLEDLAASYHKWYNLERVVPME 542 Query: 541 -ENPRLRFVQANNRKLTM----------MRLQLVHAVASIINSGLNIIGVESPNEM 585 +P R +A + RL+L AV ++I +GL+++GV +P +M Sbjct: 543 LTDPENRLPEAEREAQRIAKCPEPARAAARLKLNAAVRTVIATGLDLLGVSAPEKM 598 >gi|219683104|ref|YP_002469487.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis AD011] gi|254782942|sp|B8DWR0|SYR_BIFA0 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|219620754|gb|ACL28911.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis AD011] gi|289177559|gb|ADC84805.1| Arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis BB-12] Length = 598 Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 187/597 (31%), Positives = 307/597 (51%), Gaps = 76/597 (12%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 + + RP+D AHG ++NAAM L++ G+ P +A+L + + +V +AG GFIN Sbjct: 36 KFAVMRPKDRAHGDWASNAAMQLAKKAGMKPRDLAQLFADALNGTDGIAAVEVAGPGFIN 95 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + L + ++ ++ G +G+N G +N+EFVSANPTGP+H+G R A VGD++ Sbjct: 96 ITLDSASAAAVVDQVLDEGNRFGKNNHLSGKTLNLEFVSANPTGPIHIGGTRWAAVGDSM 155 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A ++ +G V REYY ND G QIN A S+ +D P Y G Y+ + Sbjct: 156 ARILQANGATVVREYYFNDHGEQINRFAKSLV------AAAHDEPTPVDGYKGAYIDEIA 209 Query: 211 KEL---ADKYSSELLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDLKA 251 + + A+ ++LN P +EK P+ + S Q M IR +K Sbjct: 210 RRVIVEANAEGIDILNLPRVDGGTDEKGEPLGEGDSEQREEFRKRAVPMMFDEIRQSMKE 269 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 + D++ E+ + + + I +L G +YE K T F Sbjct: 270 FRVHFDVWFHENSLY--EDGEVEKAIADLRNAGDIYE------KDGAT----------WF 311 Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKRLE 368 ST GDD DR ++KSDG+Y YFAAD+AY++ K R D IY++G+DH GY+ R+ Sbjct: 312 ESTEHGDDKDRVIIKSDGTYAYFAADIAYYRNKRHRKTDPADVAIYMLGADHHGYIGRMM 371 Query: 369 AVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 A+ AA +K + + +L+ ++V + +DG P++MSKRAG+ +T+ ++D +G D+ R+ + Sbjct: 372 AMCAAFGDKPGENMQILIGQMVNVMKDGKPVRMSKRAGNIVTIDDLIDAIGVDASRYSLA 431 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLFPRNV 484 + +D D + S +NPV+YVQYA+AR ++ R A+ D D L Sbjct: 432 RTDYNSPVDIDLNLLASHSNDNPVYYVQYAHARSCNVDRNAEAAQINAADADLSLL---- 487 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP- 543 ++E D ++I LA++P ++ A + P+++A YL DLA+ +H ++ R P Sbjct: 488 ---DTEADG---EVIAALAQWPALLTLAGDLRAPHRIAHYLEDLAAAYHKWYNVERVVPM 541 Query: 544 ---------------RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R R + RL+L AV ++I GL+++GV +P++M Sbjct: 542 PLTEAEERADEQTRERTRIAKNPEPARAAARLKLNDAVQTVIAEGLDLLGVTAPDKM 598 >gi|152980236|ref|YP_001351803.1| arginyl-tRNA synthetase [Janthinobacterium sp. Marseille] gi|166232796|sp|A6SU56|SYR_JANMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|151280313|gb|ABR88723.1| arginyl-tRNA synthetase [Janthinobacterium sp. Marseille] Length = 577 Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 202/582 (34%), Positives = 302/582 (51%), Gaps = 62/582 (10%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87 I +ERPRD +HG ++ N AM +++PL +P +A+ + A + +P +++ IAG G Sbjct: 30 ITLERPRDPSHGDVACNLAMQIAKPLKKNPREVAQALAAALLDNPANRDLIEAADIAGPG 89 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FINL L+ + + ++ +++ G E+G++ +G KV IEFVSANPTGP+HVGH R +G Sbjct: 90 FINLRLTAASRQAVVKTVLQQGAEFGKSNLGNDKKVIIEFVSANPTGPLHVGHGRQGALG 149 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D ++SL GY+VTRE+Y NDAG QI TLA SV R + L PE Y G Y++ Sbjct: 150 DAMSSLFQAQGYDVTREFYYNDAGVQIATLATSVQAR-GKGLKPGVEGWPESAYNGDYIQ 208 Query: 208 HVGKE-LADKYSSELLNFPEEKWLPI-----VKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 + + LA K S P I ++ +SV + + DL+A ++ D + Sbjct: 209 DIANDFLAKKTVSASNGEPVTASGDINDIESIRQFSVTYLRREQDLDLQAFGVKFDNYYL 268 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E + + +D L + YE +D L R+T DD D Sbjct: 269 ESSLYA--DGKVEKTVDALIKADKTYE---------------LD-GALWLRTTDYRDDKD 310 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKA 379 R + KSDG+YTYF D+AY K++RGF I V GSDH G + R+ A A + + Sbjct: 311 RVMKKSDGTYTYFVPDVAYHTVKWQRGFTQAINVQGSDHHGTIARVRAGLQALDIGIPQG 370 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD----EV----------GSDSVRFM 425 + +L ++V + R+G +K+SKRAG ++TLR +++ EV G D+VRF Sbjct: 371 YPDYVLHKMVTVMRNGEEVKISKRAGSYVTLRDLIEWSNGEVVDGEVRDLTRGRDAVRFF 430 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI-FPDLD-FDLFPRN 483 ++ RK FD Q ENPV+YVQYA+AR S+ Q D LD DL P Sbjct: 431 LISRKADTEFVFDVDIALTQGDENPVYYVQYAHARICSVLAQWTDGDEASLDKVDLSPLT 490 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 E L+ LAEYP ++ A P+++AFYL DLA H +++ R Sbjct: 491 A--------ARETALLAKLAEYPETLQKALEELGPHQVAFYLRDLAGELHSYYNAER--- 539 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V ++ L M R+ L+ A ++ +GL +IGV +P M Sbjct: 540 ----VLVDDEALKMARIALMSATRQVLRNGLALIGVSAPARM 577 >gi|308235657|ref|ZP_07666394.1| arginyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018] gi|311115202|ref|YP_003986423.1| arginine--tRNA ligase [Gardnerella vaginalis ATCC 14019] gi|310946696|gb|ADP39400.1| arginine--tRNA ligase [Gardnerella vaginalis ATCC 14019] Length = 598 Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 187/596 (31%), Positives = 314/596 (52%), Gaps = 72/596 (12%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 +++ + RP+D AHG +TN AM L++ G+ P +AEL R++ + V +AG GFI Sbjct: 35 EKLAVMRPKDRAHGDWATNVAMQLAKKAGMKPHDLAELFAERLQEAQGIARVEVAGPGFI 94 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N+ L + ++ ++ G ++G+N G +N+EFVSANPTGP+H+G R A VGD+ Sbjct: 95 NITLDSASAAAVVDEVLKQGADFGKNEHLGGKTLNLEFVSANPTGPIHIGGTRWAAVGDS 154 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 +A ++ +G +V REYY ND G QIN A S+ A + ++ P Y G Y+ + Sbjct: 155 MARVLEANGAKVVREYYFNDHGEQINRFAKSLV----AAAHGEET--PADGYKGAYINEI 208 Query: 210 GKEL---ADKYSSELLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDLK 250 + A ++L+ P +E+ LP+ + S Q M IR ++ Sbjct: 209 ADAVIKEAQADGVDVLSLPRIDLGKDEEGLPLGEGDSEQREEFRKRAVPMMFAEIRKSMR 268 Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310 + D++ E+ + + + I +L +G ++E K T Sbjct: 269 DFRVGFDVWFHENSLY--EDGEVERAIADLRERGDIFE------KDGAT----------W 310 Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG---FDNMIYVMGSDHSGYVKRL 367 F ST GDD DR ++KSDG+Y YFAAD+AY++ K R D IY++G+DH GY+ R+ Sbjct: 311 FESTKHGDDKDRVIIKSDGNYAYFAADIAYYRNKRHREQNPADVAIYMLGADHHGYIGRM 370 Query: 368 EAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 A+ AA ++ + + +L+ ++V + +DG P++MSKRAG+ IT+ +VD +G D+ R+ + Sbjct: 371 MAMCAAFGDEPGENMQILIGQMVNVMKDGKPVRMSKRAGNVITIDDLVDAIGVDASRYSL 430 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVI 485 + +D D + S +NPV+YVQYA+AR ++ R A D D DL N Sbjct: 431 ARTDYNTSVDIDLDLLASHSNDNPVYYVQYAHARSCNVARNAADAGISADGADLSLLNT- 489 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR----- 540 ++ +++ LA++P + A + P+++A YL DLA+ +H ++ R Sbjct: 490 -------EADGEVLAALAQWPAALAQAGDLRAPHRVAHYLEDLAASYHKWYNLERVVPME 542 Query: 541 -ENPRLRFVQANNRKLTM----------MRLQLVHAVASIINSGLNIIGVESPNEM 585 +P R +A + RL+L AV ++I SGL+++GV +P++M Sbjct: 543 LSDPENRLPEAEREAQRIAKCPEPARAAARLKLNEAVRTVIASGLDLLGVSAPDKM 598 >gi|195952792|ref|YP_002121082.1| arginyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1] gi|195932404|gb|ACG57104.1| arginyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1] Length = 539 Score = 297 bits (761), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 195/559 (34%), Positives = 297/559 (53%), Gaps = 51/559 (9%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 I+ P++ ++G+ ++N A ILS+ L P IA I +K P + V A GF+N+ L Sbjct: 25 IQLPKEESYGNFASNIAFILSKALKQKPQDIAITIADNLKNLPHFEKV-EALNGFVNMKL 83 Query: 94 SPSYLRKILSSIVVSGIEYGRN-------LIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 S + +L + + I Y ++ I K K+N+E+VSANPTGP+H+GH R AV+ Sbjct: 84 SSVFYEGLLFEFLENPINYIKDDAIFEAFGIKKEDKINLEYVSANPTGPLHLGHGRGAVI 143 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206 GD L L F +V REYYINDAG Q+N LA SV Q LY PE Y G Y+ Sbjct: 144 GDVLYRLFRFFDIKVDREYYINDAGNQVNLLAKSVMHYINQDLY----PFPEDGYKGDYI 199 Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 K + + +++ +N E L VKD+++ MM+ I++ LK LN++ DI+ SE Sbjct: 200 KDIAEAFLKEHNKSNINL--EINLERVKDFAISKMMEDIKNTLKLLNVEFDIYFSE---- 253 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 ++D + E +L K K + + F+S +D DR L K Sbjct: 254 ----KTLKDKV----------EKVLELLKEKNL--IEEKEGAIWFKSK--DEDKDRVLRK 295 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386 SDGSYTYFA+D+AY KY+RG+ I + G+DH GY+ RL+A A+ + ++V L Sbjct: 296 SDGSYTYFASDIAYHLDKYQRGYKKAIDLWGADHHGYIPRLKAALEALDIPQDWLSVELF 355 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446 ++V+L+ +G ++MSKR G + L V++++G+D++RFM L +K LD D VK Q+ Sbjct: 356 QIVKLFENGQEVRMSKRTGKMLKLIDVIEDIGADNLRFMFLTKKADTPLDIDINLVKAQN 415 Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 ENPVFYVQYAYAR I RQ K+ F F + +E E D LI + Sbjct: 416 SENPVFYVQYAYARTMGIKRQLKEPFV---FGFYKDKYTYEEEELD-----LIKRILSSK 467 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 V+ I ++P + D+A FH ++ + V ++ T R+ LV+A Sbjct: 468 DVLFEGVIKKDPSLVVKLSLDIAKSFHKFYNTHK-------VITSDEITTKKRISLVYAT 520 Query: 567 ASIINSGLNIIGVESPNEM 585 I + +I+ +++P M Sbjct: 521 QKIFDIIFDILSIKAPEMM 539 >gi|281413077|ref|YP_003347156.1| arginyl-tRNA synthetase [Thermotoga naphthophila RKU-10] gi|281374180|gb|ADA67742.1| arginyl-tRNA synthetase [Thermotoga naphthophila RKU-10] Length = 546 Score = 297 bits (761), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 187/557 (33%), Positives = 288/557 (51%), Gaps = 41/557 (7%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +E P G LSTN AM L++ L +P IA+ IV + DP D + I G GFIN +L Sbjct: 26 VEIPPRKEFGDLSTNVAMKLAKTLKKNPREIAKEIVKSLDEDPSFDRIEIMGPGFINFFL 85 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 S LR ++ +++ EYGR +G G KV E+ SANPTGP VGH R ++GD L+ + Sbjct: 86 SNELLRGVVKTVLEKKDEYGRENVGNGMKVQFEYGSANPTGPFTVGHGRQIIIGDVLSEV 145 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 GY+VTRE YINDAG QI LA S++ RY Q L + ++PEG Y G YL + ++L Sbjct: 146 YKELGYDVTREMYINDAGKQIRLLAQSLWARYNQ-LLGVEKEIPEGGYRGEYLVDIARDL 204 Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273 ++ + E+ K ++ ++ ++D L+ + D++ SE + + Sbjct: 205 VNEIGDRYKDLWNEEVEEFFKQTALNRILSSMKDTLEKIGSSFDVYFSEKSLI--EDGTV 262 Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333 +++ L + VYE D L S + D+ D+ L++SDG+YTY Sbjct: 263 EEVLKLLKDRNVVYE---------------KDGAVWLKVSAFI-DEEDKVLVRSDGTYTY 306 Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393 F D+AY KY+RGF + + GSDH G++ R++A A+ NV+L + V L R Sbjct: 307 FMTDIAYHYKKYKRGFRKVYDIWGSDHHGHIPRMKAAMKALDIPDDFFNVILHQFVTLKR 366 Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453 D ++MS RAG+F+TL ++DEVG D+VR+ + + FD K +S +NPV+Y Sbjct: 367 DDEIVRMSTRAGEFVTLDELLDEVGRDAVRYFFAMVDPNTHMVFDIDLAKAKSMDNPVYY 426 Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF-----DTSELQLIVHLAEYPRV 508 VQYA+AR ++F A+ + V +E + + E L+ +L + V Sbjct: 427 VQYAHARIYNLFSNAE-----------KKGVKFEEGKHLELLGNEEERVLMRNLGMFNTV 475 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 ++ P +L YL LA FH ++ + V N +L+ RL L A Sbjct: 476 LKEVAQMFAPNRLTNYLQSLAESFHAFYT------KHVIVDPENPELSNARLNLALATGI 529 Query: 569 IINSGLNIIGVESPNEM 585 ++ GL +IGV +P M Sbjct: 530 VLRKGLKLIGVSAPERM 546 >gi|157738329|ref|YP_001491013.1| arginyl-tRNA synthetase [Arcobacter butzleri RM4018] gi|166980179|sp|A8EWM0|SYR_ARCB4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|157700183|gb|ABV68343.1| arginyl-tRNA synthetase [Arcobacter butzleri RM4018] Length = 529 Score = 297 bits (760), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 187/578 (32%), Positives = 308/578 (53%), Gaps = 52/578 (8%) Query: 11 LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 ++N +KE +EK + IV+E+P+D + GH +T A L++ L P+ IA+ +V Sbjct: 1 MQNLVKEF-----IEKVLETNIVLEKPKDVSLGHYATPVAFSLAKELKKSPMLIAQELVT 55 Query: 71 RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130 +++ +P + A GFIN LSP +L+ ++ + + + + K K+ +E+VSA Sbjct: 56 KLE-NPSLFEKIEAVNGFINFKLSPLFLQSLVDDALSNKENFAKQH-KKSEKILLEYVSA 113 Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190 NPTGP+H+GH R A+ GD+LA + + GY++T EYYINDAG+Q++ L LSV + +Y Sbjct: 114 NPTGPLHIGHARGAIFGDSLARVGKYLGYDITTEYYINDAGSQMDLLGLSVNLAARDFIY 173 Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV---KDYSVQAMMKIIRD 247 D PE YY G YL + ++ Y + L + E+ + I KD+ +M +I Sbjct: 174 GEDVSYPEVYYRGDYLIDIANQIIQDYGKDYL-YDEKNFKDIALLGKDF----VMNLIIK 228 Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307 DLK L I+ D F+SE + R + +N G +Y D D K Sbjct: 229 DLKDLGIEFDNFVSEKSLYSSWNETKRVLEEN----GSLY---------------DKDDK 269 Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367 L +ST GDD DR +++ +G TY A D+ Y K KY+R FD I + G+DH GY+ R+ Sbjct: 270 TYL-KSTQYGDDSDRVVVRDNGIPTYLAGDIIYHKNKYDRNFDRYINIWGADHHGYITRV 328 Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 +A + +++ VLL ++V+L + G P KMSKR G+ I + + +E+GSD++RF+ L Sbjct: 329 KAAIEFLGNDSSKLEVLLSQMVQLLKGGEPYKMSKRKGNVILMSEITEEIGSDALRFIFL 388 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487 +K+ L+FD +K Q NP+FY+ YA+AR +F +A F D+ F + Sbjct: 389 TKKSDTHLEFDIDTLKNQDSSNPIFYINYAHARINQVFVKAGVNFDDIKDISFEK----- 443 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 + L L+ ++ A ++ K+ YLY+LAS H ++ + Sbjct: 444 ---LNQDGLNLVYESLLLESILVEAFAKRDMQKITEYLYNLASSIHKFYNEH------KI 494 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++ + L L+++ A I GL ++G+E+ M Sbjct: 495 IGSDEQNL---YLKVLSIAALSIKVGLKLLGIEAKEIM 529 >gi|170289501|ref|YP_001739739.1| arginyl-tRNA synthetase [Thermotoga sp. RQ2] gi|238688807|sp|B1L826|SYR_THESQ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|170177004|gb|ACB10056.1| arginyl-tRNA synthetase [Thermotoga sp. RQ2] Length = 546 Score = 297 bits (760), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 186/557 (33%), Positives = 286/557 (51%), Gaps = 41/557 (7%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +E P G LSTN AM L++ L +P IA+ IV + DP D + I G GFIN +L Sbjct: 26 VEIPPRKEFGDLSTNVAMKLAKTLKKNPREIAKEIVKSLDEDPSFDRIEIMGPGFINFFL 85 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 S LR ++ +++ EYGR +G G KV E+ SANPTGP VGH R ++GD L+ + Sbjct: 86 SNELLRGVVKTVLEKKDEYGRENVGNGMKVQFEYGSANPTGPFTVGHGRQIIIGDVLSEV 145 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 GY+VTRE YINDAG QI LA S++ RY Q L + ++PEG Y G YL + ++L Sbjct: 146 YKELGYDVTREMYINDAGKQIRLLAQSLWARYNQ-LLGVEKEIPEGGYRGEYLVDIARDL 204 Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273 ++ + E+ K ++ M+ ++D L+ + D++ SE + + Sbjct: 205 VNEIGDRYKDLWNEEVEEFFKQTALNRMLSSMKDTLEKIGSSFDVYFSEKSLI--EDGTV 262 Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333 +++ L + VYE D L S + D+ D+ L++SDG+YTY Sbjct: 263 EEVLKLLKNKDVVYE---------------KDGAVWLKVSAFI-DEEDKVLVRSDGTYTY 306 Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393 F D+AY KY+RGF + + GSDH G++ R++A A+ NV+L + V L R Sbjct: 307 FMTDIAYHYKKYKRGFRKVYDIWGSDHHGHIPRMKAAMKALDIPDDFFNVILHQFVTLKR 366 Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453 G ++MS RAG+F+TL ++DEVG D+ R+ + + FD K +S +NPV+Y Sbjct: 367 GGEIVRMSTRAGEFVTLDELLDEVGRDATRYFFAMVDPNTHMVFDIDLAKAKSMDNPVYY 426 Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF-----DTSELQLIVHLAEYPRV 508 VQYA+AR ++F A+ + V +E + + E L+ +L + Sbjct: 427 VQYAHARIHNLFSNAE-----------KKGVKFEEGKHLELLGNEEERVLMRNLGMFNTA 475 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 ++ P +L YL LA FH ++ + V N +L+ RL L A Sbjct: 476 LKEVAQMFAPNRLTNYLQSLAESFHAFYT------KHVIVDPENPELSNARLNLALATGI 529 Query: 569 IINSGLNIIGVESPNEM 585 ++ GL +IGV +P M Sbjct: 530 VLRKGLKLIGVSAPERM 546 >gi|206559077|ref|YP_002229837.1| arginyl-tRNA synthetase [Burkholderia cenocepacia J2315] gi|238693086|sp|B4E9M9|SYR_BURCJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|198035114|emb|CAR50988.1| putative arginyl-tRNA synthetase [Burkholderia cenocepacia J2315] Length = 593 Score = 297 bits (760), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 203/616 (32%), Positives = 314/616 (50%), Gaps = 67/616 (10%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L AD ++ + LK D + I +ERP+ AHG ++ N AM L++PLG +P Sbjct: 12 LLADSVKQVAHALKGADAAF-----VAPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66 Query: 63 TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +AE IVA + P V++ IAG GFINL LS + + +++++ G +G + Sbjct: 67 QLAEQIVAALTAQPAAQGLVEAAEIAGPGFINLRLSAAAKQAVIAAVFDQGRAFGTSDRE 126 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA Sbjct: 127 KGKQVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPI 232 +S R + L D+ PE Y G Y+ + G+ +A + + + L Sbjct: 187 ISTQAR-ARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVKGTGDVEDLDA 245 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + + DL+A ++ D + E + + +D L + G YE Sbjct: 246 IRKFAVTYLRREQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALVKAGMTYE---- 299 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L R+T GDD DR + KSDG+YTYF D+AY K+ERGF + Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTKV 347 Query: 353 IYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 I + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+ Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTV 407 Query: 411 R-----------------HVVDEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 R ++DE G D+VRF ++ RK FD +Q+ EN Sbjct: 408 RDLIEWSGGAAAGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 PV+YVQYA+AR S+ + K + ++D P + Q + + L+ LAEYP ++ Sbjct: 468 PVYYVQYAHARICSVLNELKSRY-NVDVAQLPGADLSQLTSAQATS--LMQKLAEYPDML 524 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 +A P+ +AFYL DLA FH ++ R V ++ R L+ A + Sbjct: 525 THAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDAAPRNARAALLAATRQV 577 Query: 570 INSGLNIIGVESPNEM 585 + +GL ++GV +P +M Sbjct: 578 LENGLAMLGVSAPAKM 593 >gi|315636616|ref|ZP_07891850.1| arginine--tRNA ligase [Arcobacter butzleri JV22] gi|315479125|gb|EFU69824.1| arginine--tRNA ligase [Arcobacter butzleri JV22] Length = 529 Score = 297 bits (760), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 187/578 (32%), Positives = 308/578 (53%), Gaps = 52/578 (8%) Query: 11 LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 ++N +KE +EK + IV+E+P+D + GH +T A L++ L P+ IA+ +V Sbjct: 1 MQNLVKEF-----IEKVLETNIVLEKPKDVSLGHYATPVAFSLAKELKKSPMLIAQELVT 55 Query: 71 RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130 +++ +P + A GFIN LSP +L+ ++ + + + + K K+ +E+VSA Sbjct: 56 KLE-NPSLFEKIEAVNGFINFKLSPLFLQSLVDDALSNKENFAKQH-KKSEKILLEYVSA 113 Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190 NPTGP+H+GH R A+ GD+LA + + GY++T EYYINDAG+Q++ L LSV + +Y Sbjct: 114 NPTGPLHIGHARGAIFGDSLARVGKYLGYDITTEYYINDAGSQMDLLGLSVNLAARDFIY 173 Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV---KDYSVQAMMKIIRD 247 D PE YY G YL + ++ Y + L + E+ + I KD+ +M +I Sbjct: 174 GEDVSYPEVYYRGDYLIDIANQIIQDYGKDYL-YDEKNFKDIALLGKDF----VMNLIIK 228 Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307 DLK L I+ D F+SE + R + +N G +Y D D K Sbjct: 229 DLKDLGIEFDNFVSEKSLYSSWNETKRVLEEN----GSLY---------------DKDDK 269 Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367 L +ST GDD DR +++ +G TY A D+ Y K KY+R FD I + G+DH GY+ R+ Sbjct: 270 TYL-KSTQYGDDSDRVVVRDNGIPTYLAGDIIYHKNKYDRSFDRYINIWGADHHGYITRV 328 Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 +A + +++ VLL ++V+L + G P KMSKR G+ I + + +E+GSD++RF+ L Sbjct: 329 KAAIEFLGNDSSKLEVLLSQMVQLLKGGEPYKMSKRKGNVILMSEITEEIGSDALRFIFL 388 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487 +K+ L+FD +K Q NP+FY+ YA+AR +F +A F D+ F + Sbjct: 389 TKKSDTHLEFDIDTLKNQDSSNPIFYINYAHARINQVFVKAGVNFDDIKDISFEK----- 443 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 + L L+ ++ A ++ K+ YLY+LAS H ++ + Sbjct: 444 ---LNQDGLNLVYESLLLESILVEAFAKRDMQKITEYLYNLASSIHKFYNEH------KI 494 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++ + L L+++ A I GL ++G+E+ M Sbjct: 495 IGSDEQNL---YLKVLSIAALSIKVGLKLLGIEAKEIM 529 >gi|91790322|ref|YP_551274.1| arginyl-tRNA synthetase [Polaromonas sp. JS666] gi|122967265|sp|Q123B6|SYR_POLSJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|91699547|gb|ABE46376.1| arginyl-tRNA synthetase [Polaromonas sp. JS666] Length = 561 Score = 297 bits (760), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 188/569 (33%), Positives = 294/569 (51%), Gaps = 51/569 (8%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKGF 88 V E P+ AHG ++ AAM L++PL L+P +AE + + P VD++ IAG GF Sbjct: 28 VFESPKVAAHGDFASTAAMQLAKPLKLNPRQVAENLRGLLLQAPAFARWVDAIEIAGPGF 87 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 +N+ L P ++++ ++ +YG L ++ +EFVSANPTGP+HVGH R A +GD Sbjct: 88 LNIRLKPEAKQQVVREVLQGADQYGMQLADSPHRMVVEFVSANPTGPLHVGHGRQAALGD 147 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 + +L G++V RE+Y NDAG QI TLA S R + L D+ PE Y G Y+ Sbjct: 148 AICNLFDTQGWDVWREFYYNDAGVQIQTLATSTQAR-AKGLKPGDAGWPEPAYNGDYIAD 206 Query: 209 VGKELADKYS-----SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 + + K + E + + + ++ ++V + DL+A +++ D + E Sbjct: 207 IANDFLAKKTVKSDDREFTASGDVEDIDAIRQFAVAYLRHEQDLDLRAFSVRFDNYYLES 266 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323 + + + L G YE L +ST GDD DR Sbjct: 267 SLYSS--GRVDSAVQKLKDAGKTYE----------------QDGALWLKSTDYGDDKDRV 308 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQI 381 + K DGSYTYF D+AY K+ERGF I + G DH G + R+ A AA+ + Sbjct: 309 MKKGDGSYTYFVPDVAYHLAKWERGFSKAINIQGMDHHGTIARVRAGLQAASAGIPQGYP 368 Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441 + +L +VR+ R G +K+SKRAG ++TLR +++ +D+VRF +L RK FD Sbjct: 369 DYVLHTMVRVVRHGEEVKISKRAGSYVTLRDLIEWTSADAVRFFLLSRKPDTEYVFDIDL 428 Query: 442 VKEQSKENPVFYVQYAYARCRSIF----RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497 ++ ENPV+YVQYA+AR SI Q D DL S D + Q Sbjct: 429 ALAKNNENPVYYVQYAHARICSILGTWAAQGGDASQLKSVDL---------SALDGPQAQ 479 Query: 498 -LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 L++ LA+YP ++ NA P+ +AFYL +LA+ +H ++ R + ++ + Sbjct: 480 ALMLLLAKYPDMLSNAAAGLAPHDVAFYLRELAACYHSYYDAER-------ILVDDEAIK 532 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL LV A A ++++GL ++GV +P++M Sbjct: 533 LARLALVAATAQVLHNGLKVLGVSAPHKM 561 >gi|291544037|emb|CBL17146.1| arginyl-tRNA synthetase [Ruminococcus sp. 18P13] Length = 562 Score = 296 bits (759), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 181/505 (35%), Positives = 281/505 (55%), Gaps = 31/505 (6%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFINLY 92 IE P D +HG +TNAAM+ ++P + P IAE I+ + ++ D IAG GFIN + Sbjct: 39 IEIPADKSHGDFATNAAMVCAKPFRMAPRAIAEKILGELVLEGTYFDRAEIAGPGFINFF 98 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 LSP + +++++++ YGR G+G +V +EFVSANPTGPMHVG+ R +GD LAS Sbjct: 99 LSPRWFAQVVNTVLEETGTYGRTDTGEGKRVLVEFVSANPTGPMHVGNARGGAIGDCLAS 158 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 L+ ++GY+V RE+YINDAG QI A S+ RY Q LY + +LPE Y G+ + K Sbjct: 159 LLDWAGYQVEREFYINDAGNQIEKFATSLEVRYLQ-LYRDGVELPEDAYQGMDIVEHAKA 217 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 A + ++ + + Y++ ++ ++ DL IQ+D + E H D S Sbjct: 218 FAAENGDRYVDADAKTRRDALVAYALPKNIEGLKRDLGKYRIQYDTWFRESTLH-ADGS- 275 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + +I+ L GY YE F++T G D D L++S+G T Sbjct: 276 VMEIVRKLRDSGYTYE----------------QDGATWFKATEFGADKDFVLVRSNGIPT 319 Query: 333 YFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 Y D+AY K RGFD I V+G+DH GYV RL+A A+ ++++V+L ++V + Sbjct: 320 YVVPDIAYHYNKLVTRGFDKAIDVLGADHHGYVPRLKAALTALGVDASKLDVVLMQMVFV 379 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 R+G K+SKR+G ITL +++E+ D+ RF R+ + +FD E+S +NPV Sbjct: 380 MRNGQVAKLSKRSGKAITLVTLLEEIPIDAARFFFNLREANSHFEFDLDLAVEKSSQNPV 439 Query: 452 FYVQYAYARCRSIFRQAKD--IFP-DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 +YVQYA+AR S+ R + I P +L +L + PQ E++LI ++A P+ Sbjct: 440 YYVQYAHARICSLLRNLAEEGIQPTELTGELMQQFTQPQ-------EIELIRYIAMLPQE 492 Query: 509 IENATIAQEPYKLAFYLYDLASVFH 533 I+ A +P ++ Y +LA++FH Sbjct: 493 IDTAAKHYDPSRITKYTVELATLFH 517 >gi|268609113|ref|ZP_06142840.1| arginyl-tRNA synthetase [Ruminococcus flavefaciens FD-1] Length = 588 Score = 296 bits (759), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 183/585 (31%), Positives = 296/585 (50%), Gaps = 66/585 (11%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSVFIAGKGFINL 91 IE P D +HG + N AM+ ++ + P IAELI +++++ + + +AG GF+N Sbjct: 38 TIEIPADKSHGDFAANTAMVCAKAFKMPPRKIAELITEKVQMEGTMFEKTEVAGPGFMNF 97 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +L + +++ +++ G YG+ G G + +EFVSANPTGPMH+G+ R +GD LA Sbjct: 98 FLGRKWFSQVVENVLEEGENYGKTDTGAGKRALVEFVSANPTGPMHIGNARGGAIGDCLA 157 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ-------QALYNNDSD--------- 195 S++ ++G+ RE+Y+NDAG QI S+ RY Q +Y + +D Sbjct: 158 SVLQWAGWHAEREFYVNDAGNQIEKFGKSLSLRYMHICSEKGQEIYKSAADTEEVCRRIY 217 Query: 196 ----------LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245 +PE Y G + K D + + L N EE+ + DY++ + + Sbjct: 218 GEDGSSEDFPMPEDVYLGQDIIEHAKNYFDLHGNSLENVSEEERRKALVDYALPLNIAGL 277 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 DLK I +D + E H + + + ++D L G YE Sbjct: 278 ERDLKKYRIVYDNWFRESTVHEKNETKL--VVDKLMEAGKAYE----------------Q 319 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYV 364 + FR+T G D D L +S+G YTY D+AY K R FD I V+G+DH GYV Sbjct: 320 DGAVWFRATDYGMDKDFVLKRSNGLYTYIVPDIAYHYNKLVTRNFDKAINVLGADHHGYV 379 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 RL+A A+ ++++V+L ++VRL R+G +K+SKR+G ITL ++DE+ D+ RF Sbjct: 380 PRLKAALTALGVDASKLDVVLMQMVRLVRNGETVKLSKRSGKAITLVTLLDEIPIDAARF 439 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 R+ + +FD E+S +NPV+YVQYA+AR S+ R + Sbjct: 440 FFNLREANSQFEFDLDLAIEKSSQNPVYYVQYAHARICSMLRALAE----------EGTQ 489 Query: 485 IPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 +P++++ D+ E++LI HLA P+ ++ A +P K+ Y DLA++FH + Sbjct: 490 VPEKADLSVLTDSREIELIRHLASLPKEVDLAAKTYDPAKITKYAVDLATLFHRFYD--- 546 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A +L RL L AV + + L I+ +E+P +M Sbjct: 547 ---ACSVKNAETEELKNARLLLCVAVRQTLRNVLTILNIEAPEKM 588 >gi|306819519|ref|ZP_07453226.1| arginine--tRNA ligase [Mobiluncus mulieris ATCC 35239] gi|307701227|ref|ZP_07638249.1| arginine--tRNA ligase [Mobiluncus mulieris FB024-16] gi|304647811|gb|EFM45129.1| arginine--tRNA ligase [Mobiluncus mulieris ATCC 35239] gi|307613621|gb|EFN92868.1| arginine--tRNA ligase [Mobiluncus mulieris FB024-16] Length = 559 Score = 296 bits (758), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 190/586 (32%), Positives = 293/586 (50%), Gaps = 66/586 (11%) Query: 15 LKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI 74 L E+D KV+ +ERP+ HG +TN AM L++ G+ P +AE+ V I Sbjct: 25 LNEVDLGAKVK--------VERPKSREHGDWATNIAMQLAKTAGVKPRDLAEMFVKAISG 76 Query: 75 DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG 134 V+S +AG GFIN+ L +++ I+ +G +G+N +G +N+E+VSANPTG Sbjct: 77 IEGVESAEVAGPGFINIRLEAGAAGALVADILAAGDNFGQNQSFQGQHINLEYVSANPTG 136 Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS 194 P+H+G R A VGD+LA LM SG +VTREYY ND G QI+ A S+ + Sbjct: 137 PIHLGGARWAAVGDSLARLMKSSGAKVTREYYFNDHGTQIDRFAASLLAAARGL------ 190 Query: 195 DLPEGYYPGVYLKHVGKELADKYSS----ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250 PE Y G Y+ + ++ + + P+ + + V M I+ L Sbjct: 191 PAPEDGYGGQYIADIAAQVQTQAQQAGDPDPATLPDAAAQEYFRAHGVTLMFSEIKAALA 250 Query: 251 ALNIQHDIFISEDD-FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 + D+F E+ + G + +D L + D Sbjct: 251 KFRTEFDVFFHENSLYETGKVEAAIEFLDGLG------------------EIAHKDGATW 292 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369 L +T GDD DR L+KSDG+ YFAAD+AY++ K ERG D IY++G+DH GY+ R+ A Sbjct: 293 LL-TTKHGDDKDRVLIKSDGNAAYFAADIAYYRDKRERGADCAIYLLGADHHGYIGRMMA 351 Query: 370 VAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428 + AA + + +L+ +LV LYR G +KMSKRAG+ +TL V+ VG D+ R+ ++ Sbjct: 352 MCAAFGDTPGVNLQILIGQLVNLYRSGQLVKMSKRAGNIVTLDDFVEAVGVDAARYSLVR 411 Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488 LD D + + ENPV+YVQYA+AR ++ + A + + + Sbjct: 412 SSMDTQLDIDLDVLASHTNENPVYYVQYAHARTCNVAKNAAS------------HGVSRG 459 Query: 489 SEFDTSEL------QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 + FD +L +LI LA++P + A + P+ +A YL +LA +H + R Sbjct: 460 AGFDPGQLRAAADGELIGVLAQFPTTVAQAATERAPHLVARYLENLAGAYHAWYGKRRVT 519 Query: 543 PRLRFVQANNRKLTMMR---LQLVHAVASIINSGLNIIGVESPNEM 585 P A + +T L L AV ++ +GLN++GV +P M Sbjct: 520 P------AGDDPVTAEHAALLALNDAVTVVLRNGLNLLGVSAPERM 559 >gi|294790545|ref|ZP_06755703.1| arginine--tRNA ligase [Scardovia inopinata F0304] gi|294458442|gb|EFG26795.1| arginine--tRNA ligase [Scardovia inopinata F0304] Length = 600 Score = 296 bits (757), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 191/589 (32%), Positives = 300/589 (50%), Gaps = 68/589 (11%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 +IV+ RP+D HG +TN AM L + G+ P +A L R++ + SV +AG GFIN Sbjct: 46 KIVVMRPKDRTHGDWATNIAMQLGKKAGMAPRDLAALFADRLRKAEGIASVEVAGPGFIN 105 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + L + ++ I+ G ++G+N G +N+EFVSANPTGP+H+G R A +GD+L Sbjct: 106 IVLDSASAAAVVDQILSQGRKFGQNDHLTGKTLNLEFVSANPTGPIHIGGTRWAAIGDSL 165 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A ++ +G V REYY ND G QIN A S+ + P Y G Y+ + Sbjct: 166 ARVLEANGATVVREYYFNDHGEQINRFARSLV------AAAHGEPAPADGYQGEYITEIA 219 Query: 211 KELADKYSS---ELLNFP-------EEKWLPIVKDY---SVQAMMKIIRDDLKALNIQHD 257 + + + + ++LN P E P +++ VQ M I+ + + D Sbjct: 220 EAVTRQAQADGVDILNLPRVREDDGSEGDSPQREEFRNRGVQMMFDQIKKTMSDFRVNFD 279 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 ++ E+ + + + L QG +Y+ K T F+ST G Sbjct: 280 VYFHENSVY--EDGEVDRAFRRLKDQGDIYQ------KDGAT----------WFQSTKYG 321 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYER---GFDNMIYVMGSDHSGYVKRLEAVAAAV 374 DD DR ++KS+G Y AD+AY+ K R D IY++G+DH GYV+RL+AV AA Sbjct: 322 DDKDRVIIKSNGETAYIMADIAYYLNKRHRVKNPADIAIYMLGADHHGYVRRLQAVCAAF 381 Query: 375 SEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433 +K + VL+ +LV + +DG P++MSKRAG+ +T+ +VD VG D+ R+ + ++ Sbjct: 382 GDKPGYNMQVLIGQLVNVVKDGKPVRMSKRAGNVVTMEDLVDAVGVDAARYSLERTTYNQ 441 Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESE 490 +D D + + S ENPV+YVQYA+AR +++ R A+ D L P +SE Sbjct: 442 NIDIDLDLMTKHSNENPVYYVQYAHARSKNVDRNAQAAGITVAGADLSLLDS---PADSE 498 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR------ENPR 544 L+ LA YP V++ A EP+++A YL DLA +H ++ R P Sbjct: 499 -------LLSQLALYPSVVQTAADLNEPHRIAHYLEDLAGSYHQWYAAERVVPMKLTEPE 551 Query: 545 LRFVQANNRKL--------TMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L A +L + RL+L A + +GL ++GV +P++M Sbjct: 552 LEGSDARKTQLAKDPDPARSSARLKLNDAACQVFENGLALLGVTAPDKM 600 >gi|268316200|ref|YP_003289919.1| arginyl-tRNA synthetase [Rhodothermus marinus DSM 4252] gi|262333734|gb|ACY47531.1| arginyl-tRNA synthetase [Rhodothermus marinus DSM 4252] Length = 564 Score = 296 bits (757), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 200/583 (34%), Positives = 305/583 (52%), Gaps = 70/583 (12%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK---IDPD-VDSVFIAGK 86 R +E+P + HG L+TNAAM L+R L P IAE I R++ +DP V SV +AG Sbjct: 24 RPELEKPNNPEHGDLATNAAMQLARYLKRPPRQIAEEIAERLRALPLDPRRVASVEVAGP 83 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GF+N +P YL ++L+ I+ +G YGR+ +G+G +E+VSANPTGP+ VGH R AV+ Sbjct: 84 GFLNFRFAPDYLAQVLADILAAGERYGRSDLGQGRPAIVEYVSANPTGPLTVGHGRNAVL 143 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ------------QALYNNDS 194 GDT+A+L+ + GY VTREYY NDAG Q+ L SV RY QA Sbjct: 144 GDTIANLLDWIGYRVTREYYYNDAGRQMRVLGESVRARYLALVDPNLPTKKIQAAEGEWV 203 Query: 195 DLPEGY----YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250 ++PE + Y G Y+ + + L +++ L + E P K+ + + + + IR L Sbjct: 204 EVPEPFPEDGYLGDYIIDIARMLYEQHGEALRDV--EDITPF-KEAAEKVIFEDIRRTLA 260 Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310 L I D + +E + I ++++ L +GY+YE + Sbjct: 261 RLGIHMDSYFNEHTLYEN--GKIWEVVEALRAKGYIYE----------------KDGAVW 302 Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH----SGYVKR 366 FR++ +G D D L+K G TY D+AY K+ERGF+ ++ V G+DH ++ Sbjct: 303 FRTSALGKDQDTVLVKRTGEPTYRLPDIAYHITKFERGFERIVDVFGADHIATYPDVLRA 362 Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 LE + VS +++V++ + V L R G P+KMS R ++TL ++DEVG D RF Sbjct: 363 LEVLGYDVS----KVDVVIYQFVTLVRGGEPVKMSTRKATYVTLDELIDEVGEDVTRFFF 418 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI----FPDLDFDLFPR 482 L R + L+FD +E S++NPVFY+QYA+AR SI R+A ++ P+ D L Sbjct: 419 LMRSPNTHLEFDLDLAREASEKNPVFYLQYAHARICSIMRKADEVGLKESPNPDLTLLQH 478 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 +E LI L +P VI+ A EP+++A YL ++A F + H R Sbjct: 479 E----------AEQALIKELMRFPEVIQEAAQTYEPHRVANYLREVAVAFTKFYDHCR-- 526 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L RL L A ++ +GL ++G+ +P M Sbjct: 527 -----IIGEPEPLAQARLALARAARLVLANGLRVLGISAPERM 564 >gi|293602808|ref|ZP_06685248.1| arginine--tRNA ligase [Achromobacter piechaudii ATCC 43553] gi|292818824|gb|EFF77865.1| arginine--tRNA ligase [Achromobacter piechaudii ATCC 43553] Length = 561 Score = 296 bits (757), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 193/568 (33%), Positives = 299/568 (52%), Gaps = 48/568 (8%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87 +++ERP+ AHG ++TN AM L++P +P +A+ IV + P VDS IAG G Sbjct: 28 VLLERPKVAAHGDVATNVAMQLAKPARRNPRELAQAIVDALMAAPGARDLVDSAEIAGPG 87 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FINL ++ + + +++++ G YGR G K+ +EFVSANPTGP+HVGH R A +G Sbjct: 88 FINLRITAAARQAVIAAVAEQGASYGR-APRSGEKILVEFVSANPTGPLHVGHARQAALG 146 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D L L G++VTRE+Y NDAG QI+ LA+SV R + L D P Y G Y+ Sbjct: 147 DALCRLYDAIGWDVTREFYYNDAGNQIHNLAISVQAR-ARGLTTESPDWPADGYKGDYIA 205 Query: 208 HVGKELADKYS---SELLNFPEEKWLPIVKDYSVQAMMKIIRD---DLKALNIQHDIFIS 261 + ++ D + S+ + + D V A+ + R+ DL+A + D + Sbjct: 206 DIARDFQDGKTIQPSDGEPVTATGNIDNLDDIRVFAVAYLRREQDLDLQAFGLAFDNYYL 265 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV--GDD 319 E + + ++ L G+ YE + L R+T + GDD Sbjct: 266 ESSLYTS--GRVEATVNALIAGGHTYE----------------EGGALWLRTTELGTGDD 307 Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK-- 377 DR + KS+G YTYF D+AY K K+ERGF + + GSDH G V R+ A A+ E Sbjct: 308 KDRVMRKSEGGYTYFVPDVAYHKAKWERGFHRAVNIQGSDHHGTVARVRAGLQALGEGIP 367 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437 K + +L ++V++ R G +K+SKRAG ++T+R ++D VG D+VR+ ++ R+ F Sbjct: 368 KDYPSYVLHKMVKVMRGGEEVKISKRAGSYVTMRDLIDWVGRDAVRYFLIQRRADTEFVF 427 Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497 D +S ENPV+Y+QYA+AR ++ A P D +++ SEF Sbjct: 428 DVDLALSKSDENPVYYIQYAHARISTMINNAG--MPAADVAAADTSLLTAPSEF-----A 480 Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557 L+ LAE+P V+ A P+ +AF+L D AS FH ++ R V ++ L + Sbjct: 481 LMQRLAEFPNVVALAAQDLSPHHIAFWLRDCASDFHAWYAAER-------VLVDDVALKL 533 Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585 RL+L ++ +GL ++GV +P M Sbjct: 534 ARLRLAATTRQVLANGLELMGVSAPERM 561 >gi|78067731|ref|YP_370500.1| arginyl-tRNA synthetase [Burkholderia sp. 383] gi|109894977|sp|Q39CG0|SYR_BURS3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|77968476|gb|ABB09856.1| arginyl-tRNA synthetase [Burkholderia sp. 383] Length = 593 Score = 296 bits (757), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 202/616 (32%), Positives = 314/616 (50%), Gaps = 67/616 (10%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L AD ++ + LK D + I +ERP+ AHG ++ N AM L++PLG +P Sbjct: 12 LLADSVKQVAHALKGADAAT-----VAPVITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66 Query: 63 TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +AE IVA + P V++ IAG GFINL LS + + +++++ G +G + Sbjct: 67 QLAEQIVAALTAQPGAQGLVEAAEIAGPGFINLRLSAAAKQAVIAAVFDQGRAFGTSDRE 126 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA Sbjct: 127 KGKQVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPI 232 +S R + L D+ PE Y G Y+ + G+ +A + + + L Sbjct: 187 ISTQAR-ARGLKPGDAGWPEAAYNGEYIADIARDFLNGETVAASDGEPVKGTGDVEDLDA 245 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + + DL+A ++ D + E + + +D L + G YE Sbjct: 246 IRKFAVTYLRREQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALIKAGMTYE---- 299 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L R+T GDD DR + KSDG+YTYF D+AY K+ERGF + Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTKV 347 Query: 353 IYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 I + GSDH G + R+ A + K + +L ++V + R+G +K+SKRAG ++T+ Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMREGQEVKISKRAGSYVTV 407 Query: 411 R-----------------HVVDEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 R ++DE G D+VRF ++ RK FD +Q+ EN Sbjct: 408 RDLIEWSGGAAAGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 PV+YVQYA+AR S+ + K + ++D P + Q + + L+ LAEYP ++ Sbjct: 468 PVYYVQYAHARICSVLNELKSRY-NVDVAQLPGADLSQLTSAQAAS--LMQKLAEYPDML 524 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 +A P+ +AFYL DLA FH ++ R V ++ R L+ A + Sbjct: 525 THAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577 Query: 570 INSGLNIIGVESPNEM 585 + +GL ++GV +P +M Sbjct: 578 LENGLAVLGVSAPAKM 593 >gi|269976850|ref|ZP_06183824.1| arginyl-tRNA synthetase [Mobiluncus mulieris 28-1] gi|269934681|gb|EEZ91241.1| arginyl-tRNA synthetase [Mobiluncus mulieris 28-1] Length = 559 Score = 296 bits (757), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 190/586 (32%), Positives = 293/586 (50%), Gaps = 66/586 (11%) Query: 15 LKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI 74 L E+D KV+ +ERP+ HG +TN AM L++ G+ P +AE+ V I Sbjct: 25 LNEVDLGAKVK--------VERPKSREHGDWATNIAMQLAKTAGVKPRDLAEMFVKAISG 76 Query: 75 DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG 134 V+S +AG GFIN+ L +++ I+ +G +G+N +G +N+E+VSANPTG Sbjct: 77 IEGVESAEVAGPGFINIRLEAGAAGALVADILAAGDNFGQNQSFQGQHINLEYVSANPTG 136 Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS 194 P+H+G R A VGD+LA LM SG +VTREYY ND G QI+ A S+ + Sbjct: 137 PIHLGGARWAAVGDSLARLMKSSGAKVTREYYFNDHGTQIDRFAASLLAAARGL------ 190 Query: 195 DLPEGYYPGVYLKHVGKELADKYSS----ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250 PE Y G Y+ + ++ + + P+ + + V M I+ L Sbjct: 191 PAPEDGYGGQYIADIAAQVQTQAQQAGDPDPATLPDAAAQEYFRAHGVTLMFSEIKAALA 250 Query: 251 ALNIQHDIFISEDD-FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 + D+F E+ + G + +D L + D Sbjct: 251 KFRTEFDVFFHENSLYETGKVEAAIEFLDGLG------------------EIAHKDGATW 292 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369 L +T GDD DR L+KSDG+ YFAAD+AY++ K ERG D IY++G+DH GY+ R+ A Sbjct: 293 LL-TTKHGDDKDRVLIKSDGNAAYFAADIAYYRDKRERGADCAIYLLGADHHGYIGRMMA 351 Query: 370 VAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428 + AA + + +L+ +LV LYR G +KMSKRAG+ +TL V+ VG D+ R+ ++ Sbjct: 352 MCAAFGDTPGVNLQILIGQLVNLYRSGQLVKMSKRAGNIVTLDDFVEAVGVDAARYSLVR 411 Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488 LD D + + ENPV+YVQYA+AR ++ + A + + + Sbjct: 412 SSMDTQLDIDLDVLASHTNENPVYYVQYAHARTCNVAKNAA------------AHGVSRG 459 Query: 489 SEFDTSEL------QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 + FD +L +LI LA++P + A + P+ +A YL +LA +H + R Sbjct: 460 AGFDPGQLCAAADGELIGVLAQFPTTVAQAATERAPHLVARYLENLAGAYHAWYGKRRVT 519 Query: 543 PRLRFVQANNRKLTMMR---LQLVHAVASIINSGLNIIGVESPNEM 585 P A + +T L L AV ++ +GLN++GV +P M Sbjct: 520 P------AGDDPVTAEHAALLALNDAVTVVLRNGLNLLGVSAPERM 559 >gi|15643850|ref|NP_228899.1| arginyl-tRNA synthetase [Thermotoga maritima MSB8] gi|7674352|sp|Q9X0H8|SYR_THEMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|4981637|gb|AAD36169.1|AE001768_18 arginyl-tRNA synthetase [Thermotoga maritima MSB8] Length = 546 Score = 296 bits (757), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 185/557 (33%), Positives = 286/557 (51%), Gaps = 41/557 (7%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +E P G LSTN AM L++ L +P IA+ IV + DP D + I G GFIN +L Sbjct: 26 VEIPPRKEFGDLSTNVAMKLAKTLKKNPREIAQEIVKSLDEDPSFDRIEIMGPGFINFFL 85 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 S LR ++ +++ EYGR +G G KV E+ SANPTGP VGH R ++GD L+ + Sbjct: 86 SNELLRGVVKTVLEKKDEYGRENVGNGMKVQFEYGSANPTGPFTVGHGRQIIIGDVLSEV 145 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 GY+VTRE YINDAG QI LA S++ RY Q L + ++PEG Y G YL + ++L Sbjct: 146 YKELGYDVTREMYINDAGKQIRLLAQSLWARYNQ-LLGVEKEIPEGGYRGEYLVDIARDL 204 Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273 ++ + E+ K ++ ++ ++D L+ + D++ SE + + Sbjct: 205 VNEIGDRYKDLWNEEVEEFFKQTALNRILSSMKDTLEKIGSSFDVYFSEKSLI--EDGTV 262 Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333 +++ L + VYE D L S + D+ D+ L++SDG+YTY Sbjct: 263 EEVLKLLKNKDVVYE---------------KDGAVWLKVSAFI-DEEDKVLVRSDGTYTY 306 Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393 F D+AY KY+RGF + + GSDH G++ R++A A+ NV+L + V L R Sbjct: 307 FMTDIAYHYKKYKRGFRKVYDIWGSDHHGHIPRMKAAMKALDIPDDFFNVILHQFVTLKR 366 Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453 G ++MS RAG+F+TL ++DEVG D+ R+ + + FD K +S +NPV+Y Sbjct: 367 GGEIVRMSTRAGEFVTLDELLDEVGRDATRYFFAMVDPNTHMVFDIDLAKAKSMDNPVYY 426 Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF-----DTSELQLIVHLAEYPRV 508 VQYA+AR ++F A+ + V +E + + E L+ +L + Sbjct: 427 VQYAHARIHNLFSNAE-----------KKGVKFEEGKHLELLGNEEERVLMRNLGMFNTA 475 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 ++ P +L YL LA FH ++ + V N +L+ RL L A Sbjct: 476 LKEVAQMFAPNRLTNYLQSLAESFHAFYT------KHVIVDPENPELSNARLNLALATGI 529 Query: 569 IINSGLNIIGVESPNEM 585 ++ GL +IGV +P M Sbjct: 530 VLRKGLKLIGVSAPERM 546 >gi|146329599|ref|YP_001209938.1| arginyl-tRNA synthetase [Dichelobacter nodosus VCS1703A] gi|166232783|sp|A5EXU4|SYR_DICNV RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|146233069|gb|ABQ14047.1| arginyl-tRNA synthetase [Dichelobacter nodosus VCS1703A] Length = 592 Score = 296 bits (757), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 187/601 (31%), Positives = 308/601 (51%), Gaps = 69/601 (11%) Query: 24 VEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82 ++ ++LD+ I IER +D +G ++N A+ ++ + P +A+ +V + + V + Sbjct: 22 IDIRLLDQAIEIERCKDPENGDFASNIALKYAKVFKMKPRQLADELVVSVPLMDSVAGME 81 Query: 83 IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 +AG GFIN+ LS + +L ++V YG K+ +EFVSANPTGP+HVGH R Sbjct: 82 VAGPGFINIRLSRESITAVLENVVAKKERYGCFENPNARKILVEFVSANPTGPLHVGHGR 141 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202 A GD+L+ L+ +G++V REYYIND G Q++ LALSV+WRY Q LP+G Y Sbjct: 142 GAAYGDSLSRLLIANGHQVDREYYINDFGRQMDILALSVYWRYVQEC-GIGVALPKGIYQ 200 Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLP------------------------------- 231 G Y+ + K+L +K + L +P +W P Sbjct: 201 GDYVIDIAKKLKEK-EGKRLAYPVNEWAPDYPQTWTQEQVDNGDRDRWIDGAIAGLKEKL 259 Query: 232 ------IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285 V D ++ + IR DL+ + D + SE D I + + + GY Sbjct: 260 GQKEYRGVFDLALSMELDDIRGDLEEFGVFFDRWFSERSMSENDM--INNALKKVDEAGY 317 Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345 +YE + F+ST GD+ DR + + +G TYF++D++Y KY Sbjct: 318 LYE----------------KDGAVWFKSTAFGDEKDRVVRRKNGMTTYFSSDISYHFDKY 361 Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405 RG+D MI ++G+DH GY+ R+ A AA+ ++ + L + LY+ G ++MS R+G Sbjct: 362 NRGYDQMIDILGADHHGYMARVRASLAALGLDPEKLVIALVQFAVLYKGGEKMQMSTRSG 421 Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 +F+TLR + + VG+D+ RF + RK + LDFD + SK+NP +YV+YA+ARC + Sbjct: 422 EFVTLRDLREHVGADAARFFYVMRKPEQHLDFDLDLAESNSKDNPFYYVEYAHARCCGML 481 Query: 466 RQAKDIFPDLDFDLFPRNVIP-QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 +A+ + ++ P + + + + E LI L YP V+ A P+++ Y Sbjct: 482 NKAE----EEGYEFSPEAALKCRNALVEPEETALISELHRYPEVVIAAGKQMAPHQVIIY 537 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 L +LA+ +H ++ G + V + ++ RL L AV ++ + L IIGV++ Sbjct: 538 LKELATRWHHYYDVGHK------VLHEDEEIRNARLLLTWAVRQVLRNALAIIGVQARER 591 Query: 585 M 585 M Sbjct: 592 M 592 >gi|319778817|ref|YP_004129730.1| Arginyl-tRNA synthetase [Taylorella equigenitalis MCE9] gi|317108841|gb|ADU91587.1| Arginyl-tRNA synthetase [Taylorella equigenitalis MCE9] Length = 560 Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 191/567 (33%), Positives = 300/567 (52%), Gaps = 47/567 (8%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87 I +ERP++ HG LSTN AM L++PL +P +A+ IV ++ +P +DSV IAG G Sbjct: 28 IQLERPKNPEHGDLSTNIAMQLAKPLKKNPREVAQDIVDTLQSNPSYNLLLDSVEIAGPG 87 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FIN + S + I+ I YG N KV +EFVSANPTGP+HVGH R A +G Sbjct: 88 FINFKFNVSVHQDIIHLIQSQKEIYG-NSPKNYKKVIVEFVSANPTGPLHVGHARQAALG 146 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D + L+ +GY++ RE+Y NDAG QIN LA SV R + + + D P Y G Y+ Sbjct: 147 DCICRLLEAAGYDIYREFYYNDAGNQINNLASSVQARL-KGIDPDHPDFPADGYRGDYIN 205 Query: 208 HVGKELADKYSS-----ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262 + ++ K + E+ + + L ++ ++V + + DL A N++ D + E Sbjct: 206 DIARDFITKETVKADDIEITASGDVENLNDIRKFAVAYLRREQDLDLLAFNLKFDRYYLE 265 Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV--GDDV 320 + + + ++ L G+ YE L R+T + GDD Sbjct: 266 SSLYTD--GKVEETVNTLTSNGHTYE----------------QDGALWLRTTELGTGDDK 307 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--K 378 DR + KSDG+YTYF D+AY K K++RG+ I + GSDH G V R+ A ++ K Sbjct: 308 DRVMRKSDGTYTYFVPDVAYHKTKWDRGYQKAIDIQGSDHHGTVARVRAGLQGLNLGIPK 367 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438 + +L ++VR+ R+G +K+SKRAG ++T+R ++D VG D+ R+ ++ RK FD Sbjct: 368 DYPSYILHKMVRVMRNGEEVKISKRAGSYVTMRDLIDWVGQDATRYFLIQRKADTEFTFD 427 Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498 + +ENPVFY+QYA+AR + + A ++ +D P SE+ L Sbjct: 428 IDLALSKKEENPVFYIQYAHARICKLLKDAGELAGQVDQADISLLTAP-------SEINL 480 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 + L+E P +I+ A P+ +AF+L DLA FH +S + V ++ L + Sbjct: 481 LKRLSELPDLIQIAIKELSPHLVAFWLTDLARDFHSWYSSEK-------VFVDDISLKLA 533 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 RL L A ++ + L+++GV +P +M Sbjct: 534 RLALADATKQVLANALDLLGVSAPTDM 560 >gi|227876244|ref|ZP_03994360.1| arginine--tRNA ligase [Mobiluncus mulieris ATCC 35243] gi|227843205|gb|EEJ53398.1| arginine--tRNA ligase [Mobiluncus mulieris ATCC 35243] Length = 559 Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 190/586 (32%), Positives = 293/586 (50%), Gaps = 66/586 (11%) Query: 15 LKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI 74 L E+D KV+ +ERP+ HG +TN AM L++ G+ P +AE+ V I Sbjct: 25 LNEVDLGAKVK--------VERPKSREHGDWATNIAMQLAKTAGVKPRDLAEMFVKAISG 76 Query: 75 DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG 134 V+S +AG GFIN+ L +++ I+ +G +G+N +G +N+E+VSANPTG Sbjct: 77 IEGVESAEVAGPGFINIRLEAGAAGALVADILAAGDNFGQNQSFQGQHINLEYVSANPTG 136 Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS 194 P+H+G R A VGD+LA LM SG +VTREYY ND G QI+ A S+ + Sbjct: 137 PIHLGGARWAAVGDSLARLMKSSGAKVTREYYFNDHGTQIDRFAASLLAAARGL------ 190 Query: 195 DLPEGYYPGVYLKHVGKELADKYSS----ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250 PE Y G Y+ + ++ + + P+ + + V M I+ L Sbjct: 191 PAPEDGYGGQYIADIAAQVQTQAQQAGDPDPATLPDAAAQEYFRAHGVTLMFSEIKAALA 250 Query: 251 ALNIQHDIFISEDD-FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 + D+F E+ + G + +D L + D Sbjct: 251 KFRTEFDVFFHENSLYETGKVEAAIEFLDGLG------------------EIAHKDGATW 292 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369 L +T GDD DR L+KSDG+ YFAAD+AY++ K ERG D IY++G+DH GY+ R+ A Sbjct: 293 LL-TTKHGDDKDRVLIKSDGNAAYFAADIAYYRDKRERGADCAIYLLGADHHGYIGRMMA 351 Query: 370 VAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428 + AA + + +L+ +LV LYR G +KMSKRAG+ +TL V+ VG D+ R+ ++ Sbjct: 352 MCAAFGDTPGVNLQILIGQLVNLYRSGQLVKMSKRAGNIVTLDDFVEAVGVDAARYSLVR 411 Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488 LD D + + ENPV+YVQYA+AR ++ + A + + + Sbjct: 412 SSMDTQLDIDLDVLASHTNENPVYYVQYAHARTCNVAKNAA------------AHGVSRG 459 Query: 489 SEFDTSEL------QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 + FD +L +LI LA++P + A + P+ +A YL +LA +H + R Sbjct: 460 AGFDPGQLRAAADGELIGVLAQFPTTVAQAATERAPHLVARYLENLAGAYHAWYGKRRVT 519 Query: 543 PRLRFVQANNRKLTMMR---LQLVHAVASIINSGLNIIGVESPNEM 585 P A + +T L L AV ++ +GLN++GV +P M Sbjct: 520 P------AGDDPVTAEHAALLALNDAVTVVLRNGLNLLGVSAPERM 559 >gi|258652303|ref|YP_003201459.1| arginyl-tRNA synthetase [Nakamurella multipartita DSM 44233] gi|258555528|gb|ACV78470.1| arginyl-tRNA synthetase [Nakamurella multipartita DSM 44233] Length = 551 Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 192/556 (34%), Positives = 283/556 (50%), Gaps = 34/556 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I ++RP+ HG +T AM L++ P IAE+I A + +P + V IAG GF+N+ Sbjct: 28 IPLDRPKSREHGDYATPVAMKLAKAAHRPPRQIAEIIAAHLADEPGIAGVSIAGPGFLNI 87 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + ++ IV G YG G +VN+EFVSANPTGP+H+G R A VGD L Sbjct: 88 SVETAAAASLVGRIVADGAAYGHGDALAGRQVNLEFVSANPTGPIHIGGARWAAVGDALG 147 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ G V REYY NDAGAQI+ A S+ +Q PE Y G Y+ + Sbjct: 148 RILSTQGATVIREYYFNDAGAQIDRFARSLLAAARQ------QPAPEDGYGGDYIVEIAG 201 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 + + P+++ + + V+ M I+ L D++ E+ H Sbjct: 202 RIT-AANPGAPQLPDDQATELYRAQGVELMFDEIKATLHTFRTDFDVYFHENSLHE---- 256 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 G V + + + K + + S GDD DR ++KSDG Sbjct: 257 -----------SGAVGQAV---QRLKDSGHLTFNDGAWWLNSKAYGDDKDRVVIKSDGQP 302 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 Y A DLAYF K RGFD IY++G+DH GY+ RL+A AAA + + VL+ ++V L Sbjct: 303 AYIAGDLAYFLDKRARGFDLCIYMLGADHHGYIARLKAAAAAFGDDPDVVEVLIGQMVNL 362 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 RDG PI+MSKRAG ITL +++ +G D+ R+ ++ LD D Q+ +NPV Sbjct: 363 VRDGEPIRMSKRAGTVITLDDLIEALGVDAARYALIRYSVDTTLDLDLDLWTRQTSDNPV 422 Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE-FDTS-ELQLIVHLAEYPRVI 509 FYVQYA+AR S+ R A DL +L R+ + DT+ E +LI LA +P V+ Sbjct: 423 FYVQYAHARLASLARNAA----DLGIELGLRSGGAYDPALLDTARESELIALLAAWPGVL 478 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 A +EP+++A YL DLAS +H + R P T+ RL L A + Sbjct: 479 ATAAELREPHRVARYLEDLASGYHKFYDSVRVLP---MGDEEAGPATIARLWLCAATRQV 535 Query: 570 INSGLNIIGVESPNEM 585 + +GL ++GV++P M Sbjct: 536 LANGLAVLGVDAPERM 551 >gi|148652106|ref|YP_001279199.1| arginyl-tRNA synthetase [Psychrobacter sp. PRwf-1] gi|172048457|sp|A5WC58|SYR_PSYWF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|148571190|gb|ABQ93249.1| arginyl-tRNA synthetase [Psychrobacter sp. PRwf-1] Length = 609 Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 193/584 (33%), Positives = 305/584 (52%), Gaps = 42/584 (7%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 I R + HG ++N A+ ++ +P +AE + A + + + + IAG GFIN++L Sbjct: 36 ITRSKSPEHGDYASNIALTAAKAAKSNPRALAEQLTAALPANDSIAKLEIAGPGFINIFL 95 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + +L +I +YG K+ +EFVSANPT +HVGH R A G ++A+L Sbjct: 96 NTDAKFAVLDAIFAKNQKYGLTDEFANKKIQVEFVSANPTSSLHVGHGRGAAFGMSVANL 155 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + GYEVTREYY+NDAG Q++ LA S + RY Q L P G Y G Y+ + + + Sbjct: 156 LEAVGYEVTREYYVNDAGRQMDILATSTYLRYLQ-LNGEQIHFPVGGYQGDYVTDIAQTI 214 Query: 214 ADK--------YSSELLNFPEEKWLPIVKDYSVQAMMK---------IIRDDLKALNIQH 256 + Y+ N PE++ + V D + ++ II + +AL + Sbjct: 215 KTQQNDAYVHSYADISANAPEDE-VSEVNDAGEKEVVSGDKNAHIDVIIANSKQALGDNY 273 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI---------LPPPKSKTTQKCDMDRK 307 +F+ + + DI D+L G +E + P ++ K + K Sbjct: 274 AVFL-----NAALSEILGDIKDDLNEFGVRFERWFSEKSIADEIEPVLAELDSKGHLYEK 328 Query: 308 --QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365 + FRST GD+ DR + +++G TYFA+D+AY K K+ERGFD +I V G+DH GY+ Sbjct: 329 DGNIWFRSTDFGDEKDRVVRRANGLTTYFASDIAYHKNKFERGFDTVINVWGADHHGYIA 388 Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425 R+ A A+ + ++ V+L + V L+R I+MS R+G F+TLR + +EVG+D+ RF Sbjct: 389 RVRAALTALGIDEKRLEVILVQFVALWRGEEKIQMSSRSGKFVTLRELREEVGNDAARFY 448 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 + RK +DFD K QSK+N V+Y+QYA+AR S+ + D+D + Sbjct: 449 YVARKPEVHIDFDLELAKSQSKDNAVYYIQYAHARVCSVLEKLAAKGFDVD---DAQGSA 505 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 Q +E +LI LA YP ++ A +P+ L YL DLAS+FH ++ R P Sbjct: 506 QQHLLTADAESELIKLLAAYPATLKRAATGYDPHVLTNYLKDLASLFHAWYNDNRILPVS 565 Query: 546 RFVQA--NNRKLTMM--RLQLVHAVASIINSGLNIIGVESPNEM 585 + +L MM RL+L AV ++ +GL+++G+ +P M Sbjct: 566 IIADETPSQEELDMMQARLRLSKAVRQVLANGLSLLGLSAPTSM 609 >gi|209518210|ref|ZP_03267037.1| arginyl-tRNA synthetase [Burkholderia sp. H160] gi|209501325|gb|EEA01354.1| arginyl-tRNA synthetase [Burkholderia sp. H160] Length = 596 Score = 295 bits (755), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 190/587 (32%), Positives = 298/587 (50%), Gaps = 60/587 (10%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87 I +ERP+ AHG ++ N AM L++PL +P +A+ IV + P +D+ +AG G Sbjct: 37 IALERPKVAAHGDVACNVAMQLAKPLRANPRQLAQQIVDTLLAHPQAKGLIDTAEVAGPG 96 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FINL L+ + + ++++++ YGR+ G V IEFVSANPTGP+HVGH R A +G Sbjct: 97 FINLRLTAAAKQGVIAAVLAEKDAYGRSQRDAGKHVLIEFVSANPTGPLHVGHGRQAALG 156 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D LA ++ G++V RE+Y NDAG QI+TLALS R + L D P Y G Y+ Sbjct: 157 DALAHVLGSQGWDVHREFYYNDAGVQIHTLALSTQAR-ARGLAPGDEGWPASAYNGEYIA 215 Query: 208 HVGKELADKYSSE------LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 + K+ + + E + + + L ++ ++V + + DL+A ++ D + Sbjct: 216 DIAKDYLNGVTVEASDGEPVTGARDVEDLEAIRRFAVTYLRREQDMDLQAFGVKFDQYYL 275 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E + + +D L G YE L R+T GDD D Sbjct: 276 ESSLY--TEGRVEKTVDALIAAGKTYE----------------QEGALWLRTTDDGDDKD 317 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKA 379 R + K+DG+YTYF D+AY K+ERGF +I V GSDH G + R+ A + K Sbjct: 318 RVMRKTDGTYTYFVPDVAYHVAKWERGFTKVINVQGSDHHGTIARVRAGLQGLGIGIPKG 377 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS-------------------- 419 + +L ++V + R+G +K+SKRAG ++T+R +++ G Sbjct: 378 YPDYILHKMVTVMRNGEEVKISKRAGSYVTVRDLIEWSGGATPGSEAAVDLIDEETIRRG 437 Query: 420 -DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+VRF ++ RK FD +Q+ ENPV YVQYA+AR S+ + + + Sbjct: 438 RDAVRFFLISRKADTEFVFDIDLALKQNDENPVHYVQYAHARICSVIAECNTRYGFEEST 497 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L +V P SE + L+ LAE+P ++++A P+ +AFYL +LA FH + Sbjct: 498 LASVDVAPLTSE---RAMALLNKLAEFPDMLQHAADELAPHAVAFYLRELAGEFHSFY-- 552 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N R V ++ R+ L+ A ++ +GL IGV +P +M Sbjct: 553 ---NDRAERVLVDDAAERNARVALLAATRQVLANGLATIGVSAPVKM 596 >gi|121606589|ref|YP_983918.1| arginyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2] gi|166232820|sp|A1VTL9|SYR_POLNA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|120595558|gb|ABM38997.1| arginyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2] Length = 558 Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 187/568 (32%), Positives = 294/568 (51%), Gaps = 46/568 (8%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAG 85 D+ E P+ AHG + AAM L++PL +P AE + AR+ + P V+++ IAG Sbjct: 25 DKAAFESPKVAAHGDFACTAAMQLAKPLKQNPRQTAESLRARLLLAPAFERWVEAIEIAG 84 Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 GFIN+ L P+ ++ + ++ +G +YG K+ +EFVSANPTGP+HVGH R A Sbjct: 85 PGFINIRLKPAAKQETVREVLQAGAQYGTQPTDHERKMIVEFVSANPTGPLHVGHGRQAA 144 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205 +GD + +L A G +V RE+Y NDAG QI+TLA S R + L D++ PE Y G Y Sbjct: 145 LGDAICNLHATQGLDVWREFYYNDAGVQIHTLATSTQAR-AKGLKPGDANWPEPAYNGDY 203 Query: 206 LKHVGKELADKYS-----SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 + + ++ K + E + + + ++ ++V + DLKA +++ D + Sbjct: 204 IDDIARDFLAKKTVKSDDREFTASGDVEDMEAIRQFAVAYLRHEQDLDLKAFSVKFDNYY 263 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 E + + + L G YE L RST GDD Sbjct: 264 LESSLYSS--GRVESTVQRLKDAGKTYE----------------QDGALWLRSTDYGDDK 305 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKK 378 DR + KSDG++TYF D+AY K+ERGF + + G DH G + R+ A AA Sbjct: 306 DRVMKKSDGTFTYFVPDVAYHLAKWERGFTKAVNIQGMDHHGTIARVRAGLQAANAGIPA 365 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438 + +L +VR+ R G +K+SKRAG ++TLR +++ +D+VRF +L RK FD Sbjct: 366 GYPDYVLHTMVRVVRHGEEVKISKRAGSYVTLRDLIEWTSADAVRFFLLSRKPDTEYIFD 425 Query: 439 FCKVKEQSKENPVFYVQYAYAR-CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497 ++ ENPV+YVQYA+AR C + D DL P PQ Sbjct: 426 IDLALAKNNENPVYYVQYAHARICSILTAWGGDESQFGHVDLSPL-ASPQAQ-------A 477 Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557 L++ LA+Y ++ +A P+ +AFYL +LA+ +H ++ R + ++ + + Sbjct: 478 LMLLLAKYTDMLSHAAAGFAPHDVAFYLRELAACYHSYYDAER-------ILVDDEAVKL 530 Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585 RL LV A A ++++GL ++GV +P +M Sbjct: 531 ARLALVAATAQVLHNGLAVLGVSAPRKM 558 >gi|317404348|gb|EFV84773.1| arginyl-tRNA synthetase [Achromobacter xylosoxidans C54] Length = 566 Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 188/568 (33%), Positives = 297/568 (52%), Gaps = 48/568 (8%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87 +++ERP+ AHG ++TN AM L++P +P +A+ IV + P V+S IAG G Sbjct: 33 VLLERPKVAAHGDVATNVAMQLAKPAKRNPRELAQAIVEALLALPGARDLVESAEIAGPG 92 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FINL ++ + + +++++ G +GR G K+ +EFVSANPTGP+HVGH R A +G Sbjct: 93 FINLRVTAAARQAVITAVAEQGEAFGR-AARSGEKILVEFVSANPTGPLHVGHARQAALG 151 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D L L G++VTRE+Y NDAG QI LA+SV R + + + D P Y G Y+ Sbjct: 152 DALCRLYDAIGWDVTREFYYNDAGNQIENLAISVQAR-ARGVGTDSPDWPADGYKGDYIV 210 Query: 208 HV------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 + GK + + L ++ ++V + + DL+A ++ D + Sbjct: 211 DIARDFQAGKTIQASDGEPVTATGNIDSLEDIRAFAVAYLRREQDLDLQAFGLKFDNYYL 270 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV--GDD 319 E + + + L G+ YE + L R+T + GDD Sbjct: 271 ESSLY--TSGRVEATVKALIAGGHTYE----------------EGGALWLRTTELGTGDD 312 Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK-- 377 DR + KS+G YTYF D+AY K K+ERGF + + GSDH G V R+ A A+ E Sbjct: 313 KDRVMRKSEGGYTYFVPDVAYHKAKWERGFHRAVNIQGSDHHGTVARVRAGLQALEEGIP 372 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437 K + +L ++V++ R G +K+SKRAG ++T+R ++D VG D+VR+ ++ R+ F Sbjct: 373 KDYPSYVLHKMVKVMRGGQEVKISKRAGSYVTMRDLIDWVGRDAVRYFLIQRRADTEFVF 432 Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497 D +S ENPV+Y+QYA+AR S+ A P + +++ SEF Sbjct: 433 DVDLALSKSDENPVYYIQYAHARICSVINNAG--MPAAEVAAADASLLTAPSEF-----A 485 Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557 L+ LAE+P V+ A P+ +AF+L D A+ FHG ++ R V ++ L + Sbjct: 486 LMQRLAEFPHVVALAAQELAPHHIAFWLRDCAADFHGWYNAER-------VLVDDPALKL 538 Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585 RL+L ++ +GL ++GV +P M Sbjct: 539 ARLRLAATTRQVLANGLALLGVSAPERM 566 >gi|167585288|ref|ZP_02377676.1| arginyl-tRNA synthetase [Burkholderia ubonensis Bu] Length = 598 Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 200/616 (32%), Positives = 313/616 (50%), Gaps = 62/616 (10%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L AD ++ + LK D + I +ERP+ AHG ++ N AM L++PLG +P Sbjct: 12 LLADSVKQVAHALKGADAANADVAFVAPAITLERPKVAAHGDVACNVAMQLAKPLGANPR 71 Query: 63 TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +AE IVA + P V++ IAG GFINL L+ + + ++++++ G +G + Sbjct: 72 QLAEQIVAALTAQPGAQGLVEAAEIAGPGFINLRLTAAAKQAVIAAVLAEGRGFGLSTRE 131 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G +V +EFVSANPTGP+HVGH R A +GD LA+++A G V RE+Y NDAG QI LA Sbjct: 132 HGKRVLLEFVSANPTGPLHVGHGRQAALGDALANVIASQGCAVHREFYYNDAGVQIGNLA 191 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYSSELLNFPEEKWLPI 232 +S R + L D+ PE Y G Y+ + G+ +A K + + + L Sbjct: 192 ISTQAR-ARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAAKDGEPVKGAGDVEDLEA 250 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + DL+A ++ D + E ++ + +D L + G YE Sbjct: 251 IRKFAVAYLRHEQDMDLQAFGVKFDQYYLESSLYK--EGRVEQTVDALIKAGVTYE---- 304 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L R+T GDD DR + K+DG+YTYF D+AY K+ERGF + Sbjct: 305 ------------QDGALWLRTTDNGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKV 352 Query: 353 IYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 I + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+ Sbjct: 353 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTV 412 Query: 411 R-----------------HVVDEV----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 R ++DE G D+VRF ++ RK FD +Q+ EN Sbjct: 413 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 472 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 PV+YVQYA+AR S+ + K + + + P + Q + T L+ LAEYP ++ Sbjct: 473 PVYYVQYAHARICSVLNEWKSRY-NGELAQLPGADLSQLTS--TQAASLMQKLAEYPDML 529 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 +A P+ +AFYL DLA FH ++ R V ++ R L+ A + Sbjct: 530 SHAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRTARAALLAATRQV 582 Query: 570 INSGLNIIGVESPNEM 585 + +GL ++GV +P +M Sbjct: 583 LENGLAMLGVSAPAKM 598 >gi|295675302|ref|YP_003603826.1| arginyl-tRNA synthetase [Burkholderia sp. CCGE1002] gi|295435145|gb|ADG14315.1| arginyl-tRNA synthetase [Burkholderia sp. CCGE1002] Length = 596 Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 191/588 (32%), Positives = 301/588 (51%), Gaps = 62/588 (10%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87 I +ERP+ AHG ++ N AM L++PL +P +A+ IV + ++P +D+ +AG G Sbjct: 37 IALERPKVAAHGDVACNVAMQLAKPLRANPRQLAQQIVEALLVNPQAKGLIDTAEVAGPG 96 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FINL L+ + + +++++ YGR+ G V IEFVSANPTGP+HVGH R A +G Sbjct: 97 FINLRLTAAAKQGVIAAVFAEKEAYGRSRRDAGKHVLIEFVSANPTGPLHVGHGRQAALG 156 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D LA ++ G++V RE+Y NDAG QI+TLALS R + L D P Y G Y+ Sbjct: 157 DALAHVLESQGWDVHREFYYNDAGVQIHTLALSTQAR-ARGLAPGDEGWPASAYNGEYIA 215 Query: 208 HVGKELADKYSSE------LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 + K+ + + E + + + L ++ ++V + + DL+A ++ D + Sbjct: 216 DIAKDYLNGITVEASDGEPVTGARDVEDLEAIRRFAVTYLRREQDMDLQAFGVKFDQYYL 275 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E + + +D L G YE L R+T GDD D Sbjct: 276 ESSLY--TEGRVEKTVDALIAAGKTYE----------------QEGALWLRTTDDGDDKD 317 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKA 379 R + K+DG+YTYF D+AY K+ERGF +I V GSDH G + R+ A + K Sbjct: 318 RVMRKTDGTYTYFVPDVAYHVAKWERGFTKVINVQGSDHHGTIARVRAGLQGLGIGIPKG 377 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS-------------------- 419 + +L ++V + R+G +K+SKRAG ++T+R +++ G Sbjct: 378 YPDYILHKMVTVMRNGEEVKISKRAGSYVTVRDLIEWSGGATPGSEAAVDLIDEETIRRG 437 Query: 420 -DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+VRF ++ RK FD +Q+ ENPV YVQYA+AR S+ + + LD Sbjct: 438 RDAVRFFLISRKADTEFVFDIDLALKQNDENPVHYVQYAHARICSVIAECNARY-GLDES 496 Query: 479 LFPR-NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 + P ++ P SE + L+ LAE+P ++++A P+ +AFYL +LA FH + Sbjct: 497 VLPSVDLAPLASE---RSMALLNKLAEFPDMLQHAADELAPHAVAFYLRELAGEFHSFY- 552 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N R V ++ R+ L+ A ++ +GL IGV +P +M Sbjct: 553 ----NDRAERVLVDDAAERNARVALLAATRQVLANGLATIGVSAPVKM 596 >gi|323524573|ref|YP_004226726.1| arginyl-tRNA synthetase [Burkholderia sp. CCGE1001] gi|323381575|gb|ADX53666.1| arginyl-tRNA synthetase [Burkholderia sp. CCGE1001] Length = 596 Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 189/587 (32%), Positives = 302/587 (51%), Gaps = 60/587 (10%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87 I +ERP+ AHG ++ N AM L++PL ++P +A+ IV + P ++S +AG G Sbjct: 37 IALERPKVAAHGDVACNVAMQLAKPLRVNPRQLAQQIVDTLLGQPQAQGLIESAEVAGPG 96 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FINL L+ + + ++++++ YGR+ G V IEFVSANPTGP+HVGH R A +G Sbjct: 97 FINLRLAAAAKQAVVTAVLAEQDAYGRSQRDAGKHVLIEFVSANPTGPLHVGHGRQAALG 156 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D L++++A G++V RE+Y NDAG QI TLALS R + L D+ P+ Y G Y+ Sbjct: 157 DALSNVLASQGWDVHREFYYNDAGVQIGTLALSTQAR-ARGLAPGDAGWPDSAYNGEYIA 215 Query: 208 HVGKELADKYS------SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 + K+ + + + + + L ++ ++V + + DL+A ++ D + Sbjct: 216 DIAKDYLNGVTVSASDGEPVTGARDVENLDAIRRFAVAYLRREQDMDLQAFGVKFDQYYL 275 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E + + + L G YE L R+T GDD D Sbjct: 276 ESSLYT--EGRVEKTVQALIAAGKTYE----------------QEGALWLRTTDDGDDKD 317 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKA 379 R + KSDG+YTYF D+AY K+ERGF +I + GSDH G + R+ A + K Sbjct: 318 RVMRKSDGTYTYFVPDVAYHVAKWERGFTKVINIQGSDHHGTIARVRAGLQGLGIGIPKG 377 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS-------------------- 419 + +L ++V + R+G +K+SKRAG ++T+R +++ G Sbjct: 378 YPDYVLHKMVTVMRNGEEVKISKRAGSYVTVRDLIEWSGGATPGSEAAVDLIDEETIRRG 437 Query: 420 -DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+VRF ++ RK FD +Q+ ENPV YVQYA+AR S+ + K + + Sbjct: 438 RDAVRFFLISRKADTEFVFDIDLALKQNDENPVHYVQYAHARICSVIAECKARYGADESA 497 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L ++ P SE + L+ LAE+P ++++A P+ +AFYL DLA FH + Sbjct: 498 LAKVDLAPLSSE---RAMALLNKLAEFPDMLQHAADELAPHAVAFYLRDLAGEFHSFY-- 552 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N + V ++ R+ L+ A ++ +GL IIGV +P +M Sbjct: 553 ---NDKAERVLVDDAAERNARVALLAATRQVLANGLAIIGVSAPVKM 596 >gi|73539833|ref|YP_294353.1| arginyl-tRNA synthetase [Ralstonia eutropha JMP134] gi|109895024|sp|Q477C4|SYR_RALEJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|72117246|gb|AAZ59509.1| arginyl-tRNA synthetase [Ralstonia eutropha JMP134] Length = 595 Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 200/594 (33%), Positives = 296/594 (49%), Gaps = 68/594 (11%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87 + ERP+ AHG L+ N AM ++R L +P +A+ IVA ++ DP V + IAG G Sbjct: 30 VTFERPKAAAHGDLACNIAMQVARALKSNPRELAQRIVAMVQADPRAAELVAGMEIAGPG 89 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FINL L+P+ +L +++ G YG G V +EFVSANPTGP+HVGH R A +G Sbjct: 90 FINLRLTPAAKADVLRAVLSEGDGYGAQERGMHGNVLVEFVSANPTGPLHVGHGRQAALG 149 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D LA+L+++ GY+V RE+Y NDAG QI LA+SV R + D++ PE Y G Y+ Sbjct: 150 DALANLLSWQGYDVHREFYYNDAGVQIQNLAVSVQAR-TRGFKPGDANWPEAAYNGDYIG 208 Query: 208 HVGKE-LADKYSS-------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259 + + LA K S PE+ L ++ ++V + DL+A ++ D + Sbjct: 209 DIAADFLAGKTVSASDGEPVTASGNPED--LDSIRKFAVTYLRNEQDIDLQAFGVKFDHY 266 Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319 E + + + L +G YE L R+T GDD Sbjct: 267 YLESSLYT--DGRVEAAVQGLVGKGKTYE----------------SEGALWLRTTDDGDD 308 Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEK 377 DR + K+DG+YTYF D+AY K+ERGF +I V GSDH G + R+ A + Sbjct: 309 KDRVMKKTDGTYTYFVPDVAYHTTKWERGFTKVINVQGSDHHGTIARVRAGLQGLDIGIP 368 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV------DEV-------------- 417 K + +L ++V + ++G +K+SKRAG ++T+R ++ DE Sbjct: 369 KGYPDYVLHKMVTVMKNGEEVKISKRAGSYVTVRDLIEWSNGGDETIRGCLDAGVADWPE 428 Query: 418 ----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 G D+VRF +L RK FD +Q+ ENPV+YVQYA+AR SIF Sbjct: 429 HFTRGRDAVRFFLLSRKADTEFVFDVDLALKQNDENPVYYVQYAHARICSIFESWGGADW 488 Query: 474 DLDFDLFPRNVIPQESEFDTS--ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 + + + D S L L LAE+P ++ A P+ +AFYL DLA Sbjct: 489 ESRLAELAGTDLAAVTGADASPQALALGQRLAEFPEMLAAAAGELAPHAVAFYLRDLAGD 548 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 FH ++ R V ++ + RL L+ A ++ +GL +IGV +P M Sbjct: 549 FHAFYNADR-------VLVDDEAVKRARLALLAATRQVLRNGLAVIGVSAPRRM 595 >gi|51246604|ref|YP_066488.1| arginyl-tRNA synthetase [Desulfotalea psychrophila LSv54] gi|81641259|sp|Q6AJJ9|SYR_DESPS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|50877641|emb|CAG37481.1| probable arginyl-tRNA synthetase [Desulfotalea psychrophila LSv54] Length = 552 Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 181/559 (32%), Positives = 300/559 (53%), Gaps = 40/559 (7%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFI 89 + +E P+ G STN A++L+ +P +A ++ ++ ++ V V IAG GF+ Sbjct: 30 KYTVELPKHEGQGDFSTNIALVLAGIEKRNPRELAGIVAEKLGLETAIVAGVEIAGPGFV 89 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N+ + P+ +L+ + +G +GR+ +G G KV +EFVSANPTGP+ +GH R A++GD+ Sbjct: 90 NITIQPAVWHGVLAEVFSAGENFGRSQVGAGRKVMVEFVSANPTGPLSIGHGRQAILGDS 149 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 +A L+ + ++V REYY N+AG Q+ L S RY + L + PE Y G Y+ + Sbjct: 150 IARLLEATNHDVFREYYYNNAGRQMRVLGESTRARYLE-LIGAEFSFPEDGYQGEYIIDI 208 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 + L D++ +L + P+ + KD + +A+ K I L+ + I D + +E + + Sbjct: 209 AQSLVDEHGEKLKDEPD---VEPFKDQAEKAIFKDISGTLERMGIHFDNYYNERSLY--E 263 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 I ++ L +G VYE K D + F +T +G + DR ++KS G Sbjct: 264 NGHIDSVVQELRDKGLVYE------------KDDA----VWFETTKLGQEKDRVIIKSTG 307 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 TY D+AY + K++R FD +I + GSDH V + + A+ +++ VLL + V Sbjct: 308 EPTYRLPDIAYHREKFKRNFDWLIDIFGSDHIATVPDVLSGVEALGYDASKVTVLLHQFV 367 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 L RDG +KMS R +F+T+ ++D VG D +RF + RK L+FD QS++N Sbjct: 368 TLTRDGKQVKMSTRKANFVTVDELIDVVGEDVLRFFYMLRKADSQLEFDLDLATSQSQDN 427 Query: 450 PVFYVQYAYARCRSIFRQA--KDIFP-DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 PV+YVQYA+AR SI Q+ + I P ++ L R P+ EL L+ L+ +P Sbjct: 428 PVYYVQYAHARLCSILAQSGERGIVPAEVGSSLLQRLQEPE-------ELALLKTLSGFP 480 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 IE + + P+K YL + A FH +++ + V + +L+ RL L+ A+ Sbjct: 481 AAIEGSALDLAPHKFIHYLMEFAGQFHSYYNKHK-------VITEDLELSQARLCLIQAL 533 Query: 567 ASIINSGLNIIGVESPNEM 585 + +GL+IIG+ +P M Sbjct: 534 QLTLQNGLHIIGLTAPKSM 552 >gi|94309041|ref|YP_582251.1| arginyl-tRNA synthetase [Cupriavidus metallidurans CH34] gi|123260476|sp|Q1LS94|SYR_RALME RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|93352893|gb|ABF06982.1| Arginyl-tRNA synthetase [Cupriavidus metallidurans CH34] Length = 602 Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 196/595 (32%), Positives = 298/595 (50%), Gaps = 64/595 (10%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIA 84 L + ERP+ AHG L+ N AM +++ L +P +A+ +V +K D V ++ IA Sbjct: 27 LPAVTFERPKAAAHGDLACNIAMQVAKSLKTNPRELAQKVVDAVKADSRATALVAALEIA 86 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 G GFINL LSP ++L +++ G YG +G+ +V +EFVSANPTGP+HVGH R A Sbjct: 87 GPGFINLRLSPEARAEVLRAVLADGDRYGARPVGEHGQVLVEFVSANPTGPLHVGHGRQA 146 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204 +GD LA+L+A+ G+ V RE+Y NDAG QI+TLA+SV R + L D+ PE Y G Sbjct: 147 ALGDALANLLAWQGWSVHREFYYNDAGVQIHTLAISVQAR-ARGLKPGDAGWPESAYNGD 205 Query: 205 YLKHVGKE-LADKYSSELLNFPEEKW-----LPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y+ + + LA K S P L ++ ++V + DL+A ++ D Sbjct: 206 YIADIAADFLAGKTVSASDGEPVTASGNIEDLESIRKFAVTYLRNEQDIDLQAFGVKFDR 265 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + E + + + +L +G YE L R+T GD Sbjct: 266 YYLESSLY--SDGRVEAAVQSLIAKGKTYE----------------SEGALWLRTTDDGD 307 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSE 376 D DR + K DG+YTYF D+AY K+ERGF +I V GSDH G + R+ A + Sbjct: 308 DKDRVMKKGDGTYTYFVPDVAYHTTKWERGFSKVINVQGSDHHGTIARVRAGLQGLDIGI 367 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD--------------------- 415 + + +L ++V + ++G +K+SKRAG ++T+R +++ Sbjct: 368 PQGYPDYVLHKMVTVMKNGEEVKISKRAGSYVTVRDLIEWSNGGEETIRGCLEAGVADWP 427 Query: 416 ---EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 G D+VRF +L RK FD +Q+ ENPV+YVQYA+AR SIF Sbjct: 428 AHFTRGRDAVRFFLLSRKADTEFVFDVDLALKQNDENPVYYVQYAHARICSIFEAWGGAD 487 Query: 473 PDLDFDLFPRNVIPQESEFDTS--ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 + + + D S + L LAE+P ++ A+ P+ +AFYL DLA Sbjct: 488 WEARLGELASVDLAAVTAADVSPQAIALGRRLAEFPDMLAAASSELAPHAVAFYLRDLAG 547 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 FH ++ R V ++ + RL L+ A ++ +GL +IGV +P M Sbjct: 548 DFHAFYNADR-------VLVDDETVKRARLALLAATRQVLKNGLAVIGVSAPQRM 595 >gi|255326255|ref|ZP_05367341.1| arginine--tRNA ligase [Rothia mucilaginosa ATCC 25296] gi|255296709|gb|EET76040.1| arginine--tRNA ligase [Rothia mucilaginosa ATCC 25296] Length = 554 Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 188/572 (32%), Positives = 292/572 (51%), Gaps = 53/572 (9%) Query: 24 VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83 VE L + +ERP+ HG +TN A+ L++ +G +P A L+ +I P V SV I Sbjct: 26 VEGAELPAVRVERPKSREHGDWATNVALQLAKKVGKNPREAAALLAEKISAIPGVASVDI 85 Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143 AG GF+N+ L + ++ ++IV +G YGR+ G +N+EFVSANPTGP+H+G R Sbjct: 86 AGPGFLNITLDAAAAGELAATIVEAGEAYGRSDKFAGKTINLEFVSANPTGPIHLGGTRW 145 Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203 A VGD LA ++ G V REYY ND G QI+ S+ + + PE Y G Sbjct: 146 AAVGDALARVLEAEGANVVREYYFNDHGTQIDRFVRSLIAAAR------GEETPEDGYAG 199 Query: 204 VYLKHVGKE-LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262 Y+ + + LA + + PEE I ++ M I++ L A D+F E Sbjct: 200 AYIVDIKDQILAQRPDALEAENPEE----IFREIGTHLMFDQIKESLAAFGTHFDVFFHE 255 Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322 + G + +++ + G ++E R+T GDD DR Sbjct: 256 NSVFEG--GKVDALLETMRENGQLFEA----------------DGAWWMRTTDYGDDKDR 297 Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 ++KSDG++ Y A D+AY++ K R D IY++G+DH+GYV RL+A+A + + Sbjct: 298 VVIKSDGNHAYVAGDIAYYQDKMTRAVNPADVAIYMLGADHNGYVGRLKAIAQILGYRAD 357 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439 QI V++ +LV L +DG P++MSKRAG +TL +V+ VG D+ R+ + +D D Sbjct: 358 QIEVMIGQLVNLVKDGKPVRMSKRAGTVVTLEDLVEAVGVDAARYELTRYSVDTPIDIDL 417 Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL--- 496 + +S ENPV+YVQYA+AR ++ R A + + E DTS L Sbjct: 418 GLLTSKSNENPVYYVQYAHARTAAVARNAAEAG------------VKVEDGVDTSLLDSA 465 Query: 497 ---QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553 +L+ L ++P + +A EP+++ YL LAS +H + R P+ Sbjct: 466 ADGELLAVLGQFPAAVRDAAKFYEPHRVNRYLEQLASAYHSWYGVSRVAPK---ADEEVT 522 Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L RL L +A ++ +GLN++GV +P M Sbjct: 523 DLHRTRLLLNNAAQQVLANGLNLLGVSAPERM 554 >gi|222100449|ref|YP_002535017.1| Arginyl-tRNA synthetase [Thermotoga neapolitana DSM 4359] gi|221572839|gb|ACM23651.1| Arginyl-tRNA synthetase [Thermotoga neapolitana DSM 4359] Length = 549 Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 189/558 (33%), Positives = 287/558 (51%), Gaps = 43/558 (7%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 IE P G LSTN AM L++ L +P IA+ I + D D + + G GFIN +L Sbjct: 29 IEVPPRKEFGDLSTNVAMKLAKQLKKNPREIAQEIAGLLIEDSVFDRIEVMGPGFINFFL 88 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 S L +++ +I+ G EYGR +GKG K+ E+ SANPTGP VGH R V+GD L+ + Sbjct: 89 SNEILHEVVKTILEQGEEYGRENVGKGLKIQFEYGSANPTGPFTVGHGRQIVIGDVLSEV 148 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 GY+VTRE YINDAG QI LA S++ RY + ++ ++PEG Y G YL + KEL Sbjct: 149 FKELGYDVTREMYINDAGKQIKLLAQSLWVRYNE-IFGVKMEIPEGGYRGEYLVDIAKEL 207 Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273 A + N E+ K+ ++ ++ +++ L+ + D++ SE + + Sbjct: 208 ASEIGDRYKNVWNEEVEEFFKNAALDRILSSMKNTLERMGSSFDVYYSEMSLI--EDGTV 265 Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333 +++ L + VYE D L S V +D D+ L++SDG+YTY Sbjct: 266 EEVLRILKEKDLVYE---------------KDGALWLRVSKFVEED-DKVLVRSDGTYTY 309 Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393 F D+AY KY RGF + + GSDH G++ R++A A+ NV+L + V L R Sbjct: 310 FMTDIAYHYKKYRRGFKRVYDIWGSDHHGHIPRMKAAMKALDIPDDFFNVILHQFVTLKR 369 Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVR--FMMLWRKNSELLDFDFCKVKEQSKENPV 451 G ++MS RAG+FITL ++DEVG D+ R F M+ N + D D K K + +NPV Sbjct: 370 GGETVRMSTRAGEFITLDELLDEVGKDAARYFFAMVDPNNHMVFDIDLAKAK--TMDNPV 427 Query: 452 FYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 +YVQYA+AR ++F A+ + D DL + E L+ +L + Sbjct: 428 YYVQYAHARISNLFLNAEKKGVEFEQGKDLDLLG----------NEEERTLMRNLGMFSS 477 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 ++ P +L YL L+ FH ++ + V N+ L+ RL L A Sbjct: 478 ALKEVAKMFAPNRLTNYLQMLSESFHVFYT------KHVIVDPENKALSNARLNLALATK 531 Query: 568 SIINSGLNIIGVESPNEM 585 ++ GL ++G+ +P M Sbjct: 532 IVLKKGLKLLGISAPERM 549 >gi|241661767|ref|YP_002980127.1| arginyl-tRNA synthetase [Ralstonia pickettii 12D] gi|240863794|gb|ACS61455.1| arginyl-tRNA synthetase [Ralstonia pickettii 12D] Length = 596 Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 203/609 (33%), Positives = 304/609 (49%), Gaps = 83/609 (13%) Query: 25 EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDS 80 E + IV+ERP+ AHG ++ N A+ L++PLG +P +A I I+ D V + Sbjct: 23 EGQARPEIVLERPKQAAHGDIACNVALQLAKPLGTNPRELAGKIADAIRADARGQRLVSA 82 Query: 81 VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140 V IAG GFINL LS + +++++ G YG G V +EFVSANPTGP+HVGH Sbjct: 83 VEIAGPGFINLRLSAAARADVIAAVFAEGDRYGAANTHDGAPVLVEFVSANPTGPLHVGH 142 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R A +GD LASL+ + G++V RE+Y NDAG QI+ LA+SV R + D++ PE Sbjct: 143 GRQAALGDALASLLDWQGHKVHREFYYNDAGVQIHNLAVSVQAR-ARGYKPGDANWPEAA 201 Query: 201 YPGVYLKHV------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254 Y G Y+ + GK + + + + L ++ ++V + DL+A + Sbjct: 202 YNGDYIADIAADYLAGKTVRASDGEPVTGERDVENLEAIRRFAVTYLRNEQDIDLQAFGV 261 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 + D + E + ++ +D L G YE L R+T Sbjct: 262 KFDRYYLESSLYT--EGKVQQTVDALVAAGKTYE----------------QEGALWLRTT 303 Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA- 373 GDD DR + KSDG+YTYF D+AY K+ RGF +I V GSDH G + R+ A Sbjct: 304 DDGDDKDRVMRKSDGAYTYFVPDVAYHTTKWGRGFTQVINVQGSDHHGTIARVRAGLQGL 363 Query: 374 -VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV-------------VDEV-- 417 + K + +L ++V + +DG +K+SKRAG ++T+R + VD + Sbjct: 364 NIGIPKGYPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIEWSNGDAESEAGVDTIRA 423 Query: 418 ---------------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462 G D+VRF +L RK FD +QS ENPV+YVQYA+AR Sbjct: 424 CVEAGEPNWPARFTRGRDAVRFFLLSRKADTEFVFDVDLALKQSDENPVYYVQYAHARIC 483 Query: 463 SIFRQAKDIFP------DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 S+F +A + P DL P +V PQ + L+ LA +P ++ +A Sbjct: 484 SVFERAG-VDPASLTNADLAAVTGP-DVSPQAT-------ALVQRLAAFPDMLADAAREL 534 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 P+ +AFYL DLA FH ++ R V ++ + RL L+ A ++ +GL + Sbjct: 535 APHAVAFYLRDLAGDFHAFYNADR-------VLVDDEAVKRARLALLAATRQVLRNGLTV 587 Query: 577 IGVESPNEM 585 IGV +P +M Sbjct: 588 IGVSAPQKM 596 >gi|283458341|ref|YP_003362963.1| arginyl-tRNA synthetase [Rothia mucilaginosa DY-18] gi|283134378|dbj|BAI65143.1| arginyl-tRNA synthetase [Rothia mucilaginosa DY-18] Length = 554 Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 188/572 (32%), Positives = 293/572 (51%), Gaps = 53/572 (9%) Query: 24 VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83 VE L + +ERP+ HG +TN A+ L++ +G +P +A L+ +I V SV I Sbjct: 26 VEGAELPAVRVERPKSREHGDWATNVALQLAKKVGKNPREVAALLAEKIGAIAGVASVDI 85 Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143 AG GF+N+ L + ++ ++IV +G YGR+ G +N+EFVSANPTGP+H+G R Sbjct: 86 AGPGFLNITLDAAAAGELAATIVEAGEAYGRSDKFAGKTINLEFVSANPTGPIHLGGTRW 145 Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203 A VGD LA ++ G V REYY ND G QI+ S+ + + PE Y G Sbjct: 146 AAVGDALARVLEAEGANVVREYYFNDHGTQIDRFVRSLIAAAR------GEETPEDGYAG 199 Query: 204 VYLKHVGKE-LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262 Y+ + + LA + + PEE I ++ M I++ L A D+F E Sbjct: 200 AYIVDIKDQILAQRPDALEAENPEE----IFREIGTHLMFDQIKESLAAFGTHFDVFFHE 255 Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322 + G + ++D + G ++E R+T GDD DR Sbjct: 256 NSVFEG--GKVDALLDAMRENGQLFEA----------------DGAWWMRTTDYGDDKDR 297 Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 ++KSDG++ Y A D+AY++ K R D IY++G+DH+GYV RL+A+A + + Sbjct: 298 VVIKSDGNHAYVAGDIAYYQDKMTRAVNPADVAIYMLGADHNGYVGRLKAIAQILGYRAD 357 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439 QI V++ +LV L +DG P++MSKRAG +TL +V+ VG D+ R+ + +D D Sbjct: 358 QIEVMIGQLVNLVKDGKPVRMSKRAGTVVTLEDLVEAVGVDAARYELTRYSVDTPIDIDL 417 Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL--- 496 + +S ENPV+YVQYA+AR ++ R A + + E DTS L Sbjct: 418 GLLTSKSNENPVYYVQYAHARTAAVARNAAEAG------------VKVEDGVDTSLLDSA 465 Query: 497 ---QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553 +L+ L ++P + +A EP+++ YL LAS +H + R P+ + Sbjct: 466 ADGELLAVLGQFPAAVRDAAKFYEPHRVNRYLEQLASAYHSWYGVSRVTPKADEAVTD-- 523 Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L RL L +A ++ +GLN++GV +P M Sbjct: 524 -LHRTRLLLNNAAQQVLANGLNLLGVSAPERM 554 >gi|331001441|ref|ZP_08325059.1| arginine--tRNA ligase [Parasutterella excrementihominis YIT 11859] gi|329568170|gb|EGG49987.1| arginine--tRNA ligase [Parasutterella excrementihominis YIT 11859] Length = 581 Score = 293 bits (751), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 191/577 (33%), Positives = 301/577 (52%), Gaps = 53/577 (9%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGK 86 +IV+ERP+ +HG ++ A+ ++ + P IAE +V ++ + +F IAG Sbjct: 27 KIVLERPKQQSHGDIACTVALQCAKAMKQPPRVIAEKLVEELRKETADSEMFSAIEIAGP 86 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GFINL L+P + ++ I+ G YG + G + +E+VSANPTGP+H+GH R + Sbjct: 87 GFINLKLAPFLKQDVVREILKEGPAYGCSDAHTGESILLEYVSANPTGPLHLGHARQGAL 146 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206 GD L+ ++ G+ VTRE+Y NDAG QI+ LA+SV R + L N + PE Y G Y+ Sbjct: 147 GDVLSRMLKSQGWAVTREFYYNDAGNQIHNLAISVQARCYE-LQNKPFEFPEDGYKGAYV 205 Query: 207 KHVGKELA--------DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 + ++ D E P++ L ++ Y+V + + DL AL + D Sbjct: 206 LDIAQDFLAKKPIHTFDGKVVESSGNPDD--LENIRAYAVAYLREEQHKDLTALGVAFDN 263 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + E + + + + G YE DR L F+ST GD Sbjct: 264 YYLESSLY--SDGRVAKAVQAIRNAGKTYE---------------KDRA-LWFKSTDYGD 305 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK- 377 D DR + K+DGSYTYF D+AY K+ERGF+ + + GSDH G V R+ A A S Sbjct: 306 DKDRVMRKADGSYTYFVPDVAYHLAKFERGFNRALNIQGSDHHGTVARVRAGIQAASGDF 365 Query: 378 -----KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 K +L +++++ +DG P+KMSKR+G ++TL +V+ VG D+ R M+ R+ Sbjct: 366 GFNIPKTFPEYMLHKMLQVVKDGQPVKMSKRSGTYVTLSDLVNWVGKDAARLFMVNRRAD 425 Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLFPRNVIPQES 489 FD QS ENPV+Y+QYA+AR S+F QA++ P ++ ++ ++ S Sbjct: 426 AEFVFDVDLALSQSDENPVYYLQYAHARICSVFAQAQEKGIEVPSVE-EMASEDL---SS 481 Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549 +EL+L+ L+++P + N T P L YL +LA+ FH ++ R V Sbjct: 482 LTAPTELRLMSKLSDFPTALANGTEDLSPLALVTYLKELAADFHSFYNAER-------VL 534 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586 ++ KL RL L+ A ++ +GL I+GV +P +S Sbjct: 535 VDDEKLRNARLALLVATRQVLRNGLEILGVSAPERLS 571 >gi|171060897|ref|YP_001793246.1| arginyl-tRNA synthetase [Leptothrix cholodnii SP-6] gi|238689094|sp|B1XYP5|SYR_LEPCP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|170778342|gb|ACB36481.1| arginyl-tRNA synthetase [Leptothrix cholodnii SP-6] Length = 561 Score = 293 bits (750), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 191/571 (33%), Positives = 301/571 (52%), Gaps = 55/571 (9%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKGF 88 E P+ AHG L+ AAM L+RPL +P +A+ +V + P VD++ +AG GF Sbjct: 28 AFENPKQAAHGDLAITAAMQLARPLRKNPRELAQALVEALGRQPAAQKWVDAMELAGPGF 87 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 INL L P+ ++++S+++ +G G +V +EFVSANPTGP+HVGH R A +GD Sbjct: 88 INLRLKPAARQQVVSAVLSQREGFGVRAP-NGQRVMVEFVSANPTGPLHVGHGRQAALGD 146 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 + ++ A G+ V RE+Y NDAG QI TLA S R + L D++ P Y G Y+ Sbjct: 147 AICNVFATQGWAVHREFYYNDAGVQIGTLASSTQCRL-RGLKPGDAEWPASAYNGDYIAD 205 Query: 209 VGKEL-------ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 + +E AD + E+ + ++ ++V + DL+A ++ D + Sbjct: 206 IAREFLAGATVKADDRAFTASGEVED--IDSIRQFAVAYLRHEQDLDLQAFGVRFDHYYL 263 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E + + + + L G +E + L RST GDD D Sbjct: 264 ESGLY--SSGRVEEAVAKLTAAGKTFE----------------EGGALWLRSTDYGDDKD 305 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKA 379 R + KSDG+YTYF D+AY K+ERGFD +I + GSDH G + R+ A AA V + Sbjct: 306 RVMKKSDGTYTYFVPDVAYHIHKWERGFDKVINIQGSDHHGTIARVRAGLQAAGVGVPQG 365 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439 + +L ++V + + G +K+SKRAG ++TLR ++D D+VRF ++ RK FD Sbjct: 366 WPDYVLHKMVTVMKGGEEVKISKRAGSYVTLRDLIDWTSRDAVRFFLISRKADTEFVFDV 425 Query: 440 CKVKEQSKENPVFYVQYAYAR-CRSIFRQAKDIFPDL----DFDLFPRNVIPQESEFDTS 494 + + ENPV+YVQYA+AR C + R ++ DL D DL +++ + +EF Sbjct: 426 DLALKANDENPVYYVQYAHARVCSVLARYVEEHQGDLATLADADL---SLLAEPTEF--- 479 Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554 L+ LAEYP ++ A P+ +AFYL DLA+ +H ++ +RF+ Sbjct: 480 --ALMNKLAEYPEMLGAAAADLAPHNVAFYLRDLAAHYHSYYG------AVRFLDGAVEP 531 Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R+ L+ A A ++ + L ++GV +P +M Sbjct: 532 MR-ARMALLEATAQVLRNALAVLGVSAPRKM 561 >gi|303256429|ref|ZP_07342443.1| arginine--tRNA ligase [Burkholderiales bacterium 1_1_47] gi|302859920|gb|EFL82997.1| arginine--tRNA ligase [Burkholderiales bacterium 1_1_47] Length = 581 Score = 293 bits (750), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 191/577 (33%), Positives = 301/577 (52%), Gaps = 53/577 (9%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGK 86 +IV+ERP+ +HG ++ A+ ++ + P IAE +V ++ + +F IAG Sbjct: 27 KIVLERPKQQSHGDIACTVALQCAKAMKQPPRVIAEKLVEELRKETADSEMFSAIEIAGP 86 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GFINL L+P + ++ I+ G YG + G + +E+VSANPTGP+H+GH R + Sbjct: 87 GFINLKLAPFLKQDVVREILKEGPAYGCSDAHTGESILLEYVSANPTGPLHLGHARQGAL 146 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206 GD L+ ++ G+ VTRE+Y NDAG QI+ LA+SV R + L N + PE Y G Y+ Sbjct: 147 GDVLSRMLKSQGWAVTREFYYNDAGNQIHNLAISVQARCYE-LQNKPFEFPEDGYKGAYV 205 Query: 207 KHVGKELA--------DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 + ++ D E P++ L ++ Y+V + + DL AL + D Sbjct: 206 LDIAQDFLAKEPIHTFDGKVVESSGNPDD--LENIRAYAVAYLREEQHKDLTALGVAFDN 263 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + E + + + + G YE DR L F+ST GD Sbjct: 264 YYLESSLY--SDGRVAKAVQAIRNAGKTYE---------------KDRA-LWFKSTDYGD 305 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK- 377 D DR + K+DGSYTYF D+AY K+ERGF+ + + GSDH G V R+ A A S Sbjct: 306 DKDRVMRKADGSYTYFVPDVAYHLAKFERGFNRALNIQGSDHHGTVARVRAGIQAASGDF 365 Query: 378 -----KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 K +L +++++ +DG P+KMSKR+G ++TL +V+ VG D+ R M+ R+ Sbjct: 366 GFNIPKTFPEYMLHKMLQVVKDGQPVKMSKRSGTYVTLSDLVNWVGKDAARLFMVNRRAD 425 Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLFPRNVIPQES 489 FD QS ENPV+Y+QYA+AR S+F QA++ P ++ ++ ++ S Sbjct: 426 AEFVFDVDLALSQSDENPVYYLQYAHARICSVFAQAQEKGIEVPSVE-EMASEDL---SS 481 Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549 +EL+L+ L+++P + N T P L YL +LA+ FH ++ R V Sbjct: 482 LTAPTELRLMSKLSDFPTALANGTEDLSPLALVTYLKELAADFHSFYNAER-------VL 534 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586 ++ KL RL L+ A ++ +GL I+GV +P +S Sbjct: 535 VDDEKLRNARLALLVATRQVLRNGLEILGVSAPERLS 571 >gi|254283249|ref|ZP_04958217.1| arginyl-tRNA synthetase [gamma proteobacterium NOR51-B] gi|219679452|gb|EED35801.1| arginyl-tRNA synthetase [gamma proteobacterium NOR51-B] Length = 561 Score = 293 bits (750), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 185/566 (32%), Positives = 293/566 (51%), Gaps = 50/566 (8%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 IE P+D +HG +TN AM+L++ G+ P A+ ++ + + ++ IAG GFIN L Sbjct: 32 IEHPKDPSHGDFATNLAMVLAKRAGMPPREFAQRLIDALPDNSLIEGTEIAGPGFINFRL 91 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 S + ++ I+ G EYG + KV +EFVSANPTGP+HVGH R A +GD+L+ L Sbjct: 92 SQASNTGVIREILTQGAEYGYQRHTRRGKVQVEFVSANPTGPLHVGHGRGAAIGDSLSRL 151 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG--- 210 + +G++V RE+Y NDAG QI+ LALSV R + L +++ P+ Y G Y+ + Sbjct: 152 LTATGWDVHREFYYNDAGQQISNLALSVQAR-AKGLTPENANWPDDGYRGEYIADLADAF 210 Query: 211 --KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 KE E+ + L ++ ++V + + DLKA +Q D + E + G Sbjct: 211 LKKEAVAAADREVAANGDSDDLDNIRAFAVAWLRREQDADLKAFGVQFDEYFLESSLYDG 270 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 + +++ L G+ YE L RST GDD DR + K + Sbjct: 271 --GEVDRVVEELTINGHTYE----------------QDGALWLRSTEFGDDKDRVMRKRE 312 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR----LEAVAAAVSEKKAQINVL 384 G YTYF D+AY + K+ RG+ +I G+DH + R L+ + A + + + + Sbjct: 313 GGYTYFVPDVAYHRNKWRRGYQRVINEQGADHHSTITRVRAGLQGLDAGIPDGWPEY--V 370 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L ++V + RDG +K+SKRAG ++TL ++D VG D+ RF + R + L FD + Sbjct: 371 LHQMVTVMRDGAEVKLSKRAGSYVTLSDLIDWVGRDATRFFLTARAATSQLTFDIDLARS 430 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ-ESEFDTSELQLIVHLA 503 QS ENPV+Y+QYA+AR S+ R+A+ PD P + + ++ + L L + L+ Sbjct: 431 QSNENPVYYIQYAHARVCSVERKARQQDPDWT----PTDGLESLDTLIEPEALALALTLS 486 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR----ENPRLRFVQANNRKLTMMR 559 +P V+ A EP+ +A YL +A FH ++ + E P + R Sbjct: 487 RFPEVVSTAAERLEPHDIANYLRGVAGEFHSFYNAHKMLDAEPP-----------VARAR 535 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L A +I +GL ++GV +P M Sbjct: 536 LALADATRQVIANGLALLGVSAPESM 561 >gi|294341477|emb|CAZ89894.1| putative arginyl-tRNA synthetase (ArgS) [Thiomonas sp. 3As] Length = 584 Score = 293 bits (750), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 200/627 (31%), Positives = 310/627 (49%), Gaps = 92/627 (14%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 +F++RL L++ ++ E D I + RPR HG L++N AM L++PL +P +A Sbjct: 3 EFTARLTTALQQAATALQPE--FSDSIELSRPRSDDHGELASNLAMQLAKPLKRNPRDVA 60 Query: 66 ELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 + I+ ++ + D + IAG GFIN +L P+ L++++ + ++G + G+ Sbjct: 61 QQIIDALRTNADLAEGIARTEIAGPGFINFHLHPAVLQQVIVEVEQGAAKFGHSRAGREQ 120 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 + +EFVSANPTGP+HVGH R +GD +A+++ G+ V RE+Y NDAG QI TLALSV Sbjct: 121 PMLVEFVSANPTGPLHVGHGRQGALGDAIAAVLTTQGWAVQREFYYNDAGVQIQTLALSV 180 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 R + D+ PE Y G Y+ + + D + E + P+++ PIV + + Sbjct: 181 QAR-ARGYKPGDAQWPESAYNGDYIADIAR---DFLACE--SVPDDQGQPIVANGQADDL 234 Query: 242 MKIIR-----------DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290 I R DLK I+ D + E + + D + L G+ YE Sbjct: 235 DNIRRFAVAYLRREQDLDLKTFGIRFDNYYLESSLY--TDGRVEDAVQRLQASGHTYE-- 290 Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350 L R+T GDD DR + KSDG+YTYF D+AY K++RGF Sbjct: 291 --------------QDGALWLRTTQYGDDKDRVMRKSDGTYTYFVPDVAYHLAKWQRGFH 336 Query: 351 NMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 + + GSDH G + R+ A A + + +L ++V + R G +K+SKRAG ++ Sbjct: 337 RAVNIQGSDHHGTIARVRAGLQALDLGIPTGYPDYVLHKMVTVMRGGQEVKISKRAGSYV 396 Query: 409 TLRHVVD------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 T+R +++ + G D+VRF ++ RK FD QS ENP Sbjct: 397 TVRDLIEWSGGVRDDMSDEQRQAALQRGRDAVRFFLVSRKADTEFVFDVDLALAQSDENP 456 Query: 451 VFYVQYAYARCRSIFRQAKDIFP------------DLDFDLFPRNVIPQESEFDTSELQL 498 V+YVQYA+AR S+F Q P DL + PR E L Sbjct: 457 VYYVQYAHARVNSVFEQWAARAPQEAAQPALIEQADLSLLIAPR------------ERAL 504 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 + LA YP+V+ A P+++AFYL DLA+ FH ++ R V + L Sbjct: 505 QLTLARYPQVLAAAAQELAPHQVAFYLRDLAADFHAFYNAER-------VLVDELPLRHA 557 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 RL+L+ AV ++++ L ++GV +P M Sbjct: 558 RLRLLRAVRQVMHNALAVLGVSAPQRM 584 >gi|300933603|ref|ZP_07148859.1| arginyl-tRNA synthetase [Corynebacterium resistens DSM 45100] Length = 554 Score = 293 bits (750), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 181/554 (32%), Positives = 279/554 (50%), Gaps = 33/554 (5%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +ERPR+ HG +TN AM +++ G +P + + +D +AG GFIN+ Sbjct: 33 TVERPRNPEHGDYATNIAMQVAKKAGTNPREFGTWLAESLGAAEGIDEATVAGPGFINIR 92 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L+ KI++ I+ +G YG+ G K+N+EFVSANPTGP+H+G R A VGD+L Sbjct: 93 LAADAQGKIVTDILNAGENYGQGDEFAGKKINLEFVSANPTGPVHLGGTRWAAVGDSLGR 152 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 ++ G EVTREYY ND G QI+ A S+ + PE Y G Y++ + + Sbjct: 153 ILTKRGAEVTREYYFNDHGTQIDRFARSLVAAAKG------QPTPEDGYGGDYIQDIANQ 206 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 + + N EE + V+ M I+ L + D++ E+ + Sbjct: 207 ITSAHEG-WENKSEEDLHEFFRAEGVELMFAHIKRTLAEFGTEFDVYFHENSLF--ESGA 263 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + I L G +YE R++ GDD DR ++KSDG Sbjct: 264 VDKAIQTLKSNGNLYE----------------SEGAWWLRASNFGDDKDRVVIKSDGDAA 307 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 Y A D+AY K +RG D IY++G+DH GY+ RL+A AAA+ Q+ V++ ++V L Sbjct: 308 YIAGDIAYIADKIDRGHDLCIYMLGADHHGYIARLKAAAAALGYDPDQVEVMIGQMVNLV 367 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 +DG ++MSKRAG ITL +V+ +G D+ R+ ++ LD D QS +NPVF Sbjct: 368 KDGKAVRMSKRAGTVITLDDLVELIGVDAARYALIRSSVDSSLDIDMNLWASQSNDNPVF 427 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 YVQY +AR SI R+A + + +D +++ E E D LI L E+P VI A Sbjct: 428 YVQYGHARLSSIARKADE--AGVTYDGADMSLLTHEREGD-----LIRTLGEFPEVIATA 480 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL-RFVQANNRKLTMMRLQLVHAVASIIN 571 +EP+++A Y LA FH + + P+ + ++ ++ RL L A + Sbjct: 481 AELREPHRIARYAEHLAGTFHRFYDACQILPKADQPTGSDADEVFRSRLALAAATRQTLA 540 Query: 572 SGLNIIGVESPNEM 585 + L ++GV +P M Sbjct: 541 NALALVGVSAPERM 554 >gi|260222579|emb|CBA32280.1| Arginyl-tRNA synthetase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 565 Score = 293 bits (750), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 186/575 (32%), Positives = 296/575 (51%), Gaps = 55/575 (9%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGK 86 + E P+ AHG +T AAM L++PL ++P +AE + + P V + IAG Sbjct: 26 KAAFESPKVAAHGDFATTAAMQLAKPLKMNPRQLAETLRGELLATPVYQRWVQDIEIAGP 85 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GFIN+ L P+ ++++ ++ G +G G V +EFVSANPTGP+HVGH R A + Sbjct: 86 GFINIRLKPAAKQEVVREVLGQGARFGYQ-PESGKPVLVEFVSANPTGPLHVGHGRQAAL 144 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ-----QALYNNDSDLPE--G 199 GD + +L A GY+V RE+Y NDAG QI+TL S R + + + D D PE Sbjct: 145 GDAICNLFATQGYKVHREFYYNDAGVQIDTLTKSTQLRAKGFKPGDSCWPTDPDNPESKA 204 Query: 200 YYPGVYLKHVGKELADKYS-----SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254 +Y G Y+ + + K S E + ++ ++V + DL+A N+ Sbjct: 205 FYNGDYIADIAEAFKAKASIKADDREFTANGDVDDYDNIRQFAVAYLRNEQDKDLQAFNL 264 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 D + E + + ++ L G YE L +ST Sbjct: 265 HFDQYYLESSLYTS--GRVDAAVNKLVGNGKTYE----------------QDGALWLKST 306 Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAA 372 GDD DR + K DGSYTYF D+AY K+ERGF ++ + G+DH G + R+ A AA Sbjct: 307 DYGDDKDRVMRKKDGSYTYFVPDVAYHIAKWERGFAKVVNIQGTDHHGTIARVRAGLQAA 366 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 V + + +L +VR+ R G +K+SKRAG ++TLR +++ D+VRF +L RK Sbjct: 367 DVGIPQGYPDYVLHTMVRVVRGGEEVKISKRAGSYVTLRDLIEWTSKDAVRFFLLSRKPD 426 Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491 FD +++ +NPV+YVQYA+AR C + D+ DL S Sbjct: 427 TEYTFDVDLAVQKNNDNPVYYVQYAHARICSVLASWGGDVAALKGVDL---------SAL 477 Query: 492 DTSELQ-LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550 ++S+ Q L++ LA++P ++ AT + P+ + FYL +LA+ +H ++ R + Sbjct: 478 ESSQAQALMLLLAKFPEMLTAATEGEAPHDVTFYLRELAASYHSYYDAER-------ILV 530 Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + + RL LV A A ++++GL ++GV +P +M Sbjct: 531 DDEAVKLARLALVAATAQVLHNGLAVLGVSAPQKM 565 >gi|315925515|ref|ZP_07921725.1| arginine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263] gi|315621056|gb|EFV01027.1| arginine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263] Length = 563 Score = 293 bits (750), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 194/566 (34%), Positives = 292/566 (51%), Gaps = 44/566 (7%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKG 87 L I +E PR+ G +TN AM L + P IAE IV V V IAG G Sbjct: 33 LPAIQLEVPREAQFGDYATNVAMQLPGQAHMAPRAIAEAIVGHFDAAAAYVQDVTIAGPG 92 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FIN L P++ +++ I G +YGR G N+EFVSANPTGPMH+G+ R +G Sbjct: 93 FINFALDPTWHYEVIGEIEAKGADYGRTTGNAGKTYNLEFVSANPTGPMHMGNARGGAIG 152 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D LA + A++GY+VTRE+Y+NDAG QI S+ R++Q L D PE Y G ++ Sbjct: 153 DVLAEIAAWTGYDVTREFYVNDAGNQIAKFGDSLDARFRQ-LLGEDIPFPEDGYQGADIR 211 Query: 208 -HVGKELADKYSSE----LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262 H+ + +A+ LL+ E + DY+++ ++ + D+++ + +D++ SE Sbjct: 212 AHMEEYIAENGGKAAVRPLLDRTPETRKALFVDYALKKNLRQMHADMESYGVDYDVWFSE 271 Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322 + D I + L +G Y+ K T F++T G + D Sbjct: 272 QSMY--DDGEIERALKLLKDKGATYD------KEGAT----------WFKTTDYGCEKDD 313 Query: 323 PLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381 L++ +G TYF D+AY K RGFD + V G+DH G++ RL+A AA +++ Sbjct: 314 VLIRQNGLPTYFMGDIAYHLNKLLTRGFDRAVNVWGADHHGHIARLKAAIAAAGVDASRL 373 Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441 ++ +LVRL RDG P++MSKR G I L ++D VG D+ R R DFD Sbjct: 374 EIVTMQLVRLIRDGEPVRMSKRQGKAIGLTELLDMVGIDAARVFFNLRSPDSHFDFDLDL 433 Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS--ELQLI 499 QS +NPVFYVQYA+AR SI RQ + D+D P + E T+ EL+L+ Sbjct: 434 AIRQSNDNPVFYVQYAHARIASILRQ---LGGDVDL------AAPAKLELLTNPKELELL 484 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 L+++P I A +P ++ Y LAS FH ++ R V+ ++ L R Sbjct: 485 SVLSDFPETIVAAEHKMDPSRMVHYAQRLASAFHTFYNECR-------VRVDDADLMHAR 537 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L+L+ A ++ + L I+GV++P M Sbjct: 538 LKLILACRQVLENVLGILGVDAPEAM 563 >gi|93007063|ref|YP_581500.1| arginyl-tRNA synthetase [Psychrobacter cryohalolentis K5] gi|109895023|sp|Q1Q8I7|SYR_PSYCK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|92394741|gb|ABE76016.1| arginyl-tRNA synthetase [Psychrobacter cryohalolentis K5] Length = 609 Score = 293 bits (749), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 191/604 (31%), Positives = 304/604 (50%), Gaps = 82/604 (13%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 I R +D +HG ++N A+ ++ +P +AE IV + + D+ + IAG GFIN++L Sbjct: 36 ITRTKDTSHGDFASNIALTAAKAAKANPRQVAEKIVNALPENQDIRQIEIAGPGFINVFL 95 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + +L I +G + G K+ +EFVSANPT +HVGH R A G ++++L Sbjct: 96 NTEAKFAVLDDIFNLQNGFGLSKQFDGQKIQVEFVSANPTSSLHVGHGRGAAFGMSVSNL 155 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKE 212 + GY+VTREYY+NDAG Q++ LA S + RY + N ++ P Y G Y+ + + Sbjct: 156 LEAIGYDVTREYYVNDAGRQMDILATSTYLRYLET--NGETVTFPVNGYQGDYVSDIAQT 213 Query: 213 L----ADKYSSELL----NFPEEKWLPIVKD----------------------------- 235 L AD Y N PE+ I D Sbjct: 214 LKTQHADTYVHRFADIAENVPEDAQFEINADGEKVLLSGDKEAHIDGLIANSKALLGNGY 273 Query: 236 -----YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290 ++ +++ I+DDL + ++ + SE R S I ++ L +GY+YE Sbjct: 274 ELFLNAALSSILADIKDDLNDFGVSYECWFSE----RSIDSEIEPVLQILEDKGYLYE-- 327 Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350 + F+ST GD+ DR + +++G TYFA+D+AY K K++RGFD Sbjct: 328 --------------KDGNIWFKSTDFGDEKDRVVRRANGQSTYFASDIAYHKNKFDRGFD 373 Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 ++ V G+DH GYV R++A A+ +++V+L + V L+R ++MS R+G F+TL Sbjct: 374 KVVNVWGADHHGYVPRVKAALLALGIDADRLDVVLVQFVALWRGDEKVQMSSRSGKFVTL 433 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R + EVG+D+ RF + RK +DFD K QSK+N V+Y+QYA+AR + + + Sbjct: 434 RELRHEVGNDAARFYYVARKPEVHVDFDLELAKSQSKDNLVYYIQYAHARVCRVLEKLET 493 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 +D + QE SE +LI LA YP + + EP+ L YL +LA+ Sbjct: 494 SGLSVDDAI---GAAQQELLVAPSEEELIKLLAAYPATLMRSATGYEPHILTNYLKELAA 550 Query: 531 VFHGHWSHGR---------ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 +FHG + R E P A+ + RL+L AV +I++GL ++G+ + Sbjct: 551 LFHGWYDSNRILPVSLTSGETP-----SADEMAMMQARLRLSKAVRQVISNGLGLLGLSA 605 Query: 582 PNEM 585 P+ M Sbjct: 606 PSSM 609 >gi|187927245|ref|YP_001897732.1| arginyl-tRNA synthetase [Ralstonia pickettii 12J] gi|309780055|ref|ZP_07674808.1| arginine--tRNA ligase [Ralstonia sp. 5_7_47FAA] gi|238691829|sp|B2UDW0|SYR_RALPJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|187724135|gb|ACD25300.1| arginyl-tRNA synthetase [Ralstonia pickettii 12J] gi|308921225|gb|EFP66869.1| arginine--tRNA ligase [Ralstonia sp. 5_7_47FAA] Length = 596 Score = 292 bits (748), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 201/607 (33%), Positives = 302/607 (49%), Gaps = 79/607 (13%) Query: 25 EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDS 80 E + IV+ERP+ AHG ++ N A+ L++PLG +P +A I I+ D V + Sbjct: 23 EGQARPEIVLERPKQAAHGDIACNVALQLAKPLGTNPRELAGKIADAIRADARGQRLVAA 82 Query: 81 VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140 V IAG GFINL LS + +++++ G YG G V +EFVSANPTGP+HVGH Sbjct: 83 VEIAGPGFINLRLSAAARADVIAAVFAEGDRYGAANTHDGAPVLVEFVSANPTGPLHVGH 142 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R A +GD LASL+ + G++V RE+Y NDAG QI+ LA+SV R + D++ PE Sbjct: 143 GRQAALGDALASLLDWQGHKVHREFYYNDAGVQIHNLAVSVQAR-ARGYKPGDANWPEAA 201 Query: 201 YPGVYLKHV------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254 Y G Y+ + GK + + + + + ++ ++V + DL+A + Sbjct: 202 YNGDYIADIAADYLAGKTVRASDGEPVTGERDVENIEAIRRFAVTYLRNEQDIDLQAFGV 261 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 + D + E + ++ +D L G YE L R+T Sbjct: 262 KFDRYYLESSLYT--EGKVQQTVDALVAAGKTYE----------------QEGALWLRTT 303 Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA- 373 GDD DR + KSDG+YTYF D+AY K+ RGF +I V GSDH G + R+ A Sbjct: 304 DDGDDKDRVMRKSDGAYTYFVPDVAYHTTKWGRGFTQVINVQGSDHHGTIARVRAGLQGL 363 Query: 374 -VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV-------------VDEV-- 417 + K + +L ++V + +DG +K+SKRAG ++T+R + VD + Sbjct: 364 NIGIPKGYPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIEWSNGDAESEAGVDTIRA 423 Query: 418 ---------------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462 G D+VRF +L RK FD +QS ENPV+YVQYA+AR Sbjct: 424 CVEAGEPNWPARFTRGRDAVRFFLLSRKADTEFVFDVDLALKQSDENPVYYVQYAHARIC 483 Query: 463 SIFRQAK-DIFPDLDFDLFP---RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 S+F +A D DL +V PQ + L+ LA +P ++ +A P Sbjct: 484 SVFERAGVDAASLTSADLAAVTGPDVSPQATA-------LVQRLAAFPDMLADAARELAP 536 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 + +AFYL DLA FH ++ R V ++ + RL L+ A ++ +GL +IG Sbjct: 537 HAVAFYLRDLAGDFHAFYNADR-------VLVDDEAVKRARLALLAATRQVLRNGLAVIG 589 Query: 579 VESPNEM 585 V +P +M Sbjct: 590 VSAPQKM 596 >gi|33591373|ref|NP_879017.1| arginyl-tRNA synthetase [Bordetella pertussis Tohama I] gi|33571015|emb|CAE40495.1| arginyl-tRNA synthetase [Bordetella pertussis Tohama I] gi|332380774|gb|AEE65621.1| arginyl-tRNA synthetase [Bordetella pertussis CS] Length = 595 Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 184/574 (32%), Positives = 300/574 (52%), Gaps = 59/574 (10%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGK 86 ++ +ERP+ AHG ++TN AM L++P +P +A+ IV + P + IAG Sbjct: 62 QVQLERPKVAAHGDIATNVAMQLAKPARRNPRELAQGIVDALMAQPQARELIQDAEIAGP 121 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GFIN L+P+ + ++ ++ YGR G KV +EFVSANPTGP+HVGH R A + Sbjct: 122 GFINFRLTPAARQAVVQAVASQADAYGR-APRNGEKVLVEFVSANPTGPLHVGHARQAAL 180 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206 GD + L SG++VTRE+Y NDAG QI+ LA+SV R + + + D P Y G Y+ Sbjct: 181 GDAICRLYDASGWDVTREFYYNDAGNQIDNLAISVQAR-GRGIAPDAPDYPADGYKGDYI 239 Query: 207 KHVGKELADKYSSE------LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 + ++ A + S + + + L ++ ++V + + DL+A + D + Sbjct: 240 VEIARDFAARKSVQASDGQPVTATGDLDSLDDIRAFAVAYLRREQDLDLQAFGLAFDNYF 299 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV--GD 318 E + +++ +D L +G+ YE + L R+T + GD Sbjct: 300 LESSLYAS--GRVQETVDTLVAKGHTYE----------------EGGALWLRTTELGTGD 341 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378 D DR + KS+G YTYF D+AY K K+ERGF + + + GSDH G V R+ A ++ Sbjct: 342 DKDRVMRKSEGGYTYFVPDVAYHKVKWERGFHHAVNIQGSDHHGTVARVRAGLQGLAGIP 401 Query: 379 AQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437 +L ++V++ R G +K+SKRAG ++T+R ++D VG D+VR+ ++ R+ F Sbjct: 402 KDFPAYVLHKMVKVMRGGEEVKISKRAGSYVTMRDLIDWVGRDAVRYFLIQRRADTEFVF 461 Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT---- 493 D +S ENPV+Y+QYA+AR ++ + ++ ++ DT Sbjct: 462 DIDLALSKSDENPVYYIQYAHARICTMIGNSGASAAEI-------------AQADTALLT 508 Query: 494 --SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551 SE L+ LAE+P+V+ A P+ +AF+L D AS FH ++ R V + Sbjct: 509 APSEYALLQRLAEFPQVVALAAQELAPHHVAFWLRDCASDFHAWYNAER-------VLVD 561 Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L + RL+L ++ +GL ++GV +P+ M Sbjct: 562 EPALKLARLRLAATTRQVLANGLALLGVSAPDRM 595 >gi|50954431|ref|YP_061719.1| arginyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07] gi|71657984|sp|Q6AG81|SYR_LEIXX RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|50950913|gb|AAT88614.1| arginyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 562 Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 183/558 (32%), Positives = 289/558 (51%), Gaps = 37/558 (6%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + +ERP++ HG S+N AM L++ G +P +A I V S +AG GFIN Sbjct: 38 VPLERPKNRGHGDWSSNVAMRLAKKAGANPRELAAEIAEAAAGIDGVASAEVAGPGFINF 97 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + ++ +I+ +G YG + G VN+EFVSANPTGP+H+G R A VGD+LA Sbjct: 98 RLEAAAAGQLARTILEAGAAYGTGDLYDGLLVNLEFVSANPTGPIHLGGARWAAVGDSLA 157 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ G +VTREYY ND G+QI+ A S+ A + ++ PE Y G Y+ + Sbjct: 158 RILQAEGADVTREYYFNDHGSQIDRFARSLL-----AAHRGEA-TPEDGYGGGYIGEIAA 211 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 ++A Y +L + + + M + I+D L + + D++ ED H Sbjct: 212 KVAAGYDGDLAALSRDDQQEVFRSAGTALMFQEIKDRLHSFGVDFDVYFHEDSLHA--SG 269 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + I L G+++E + + R+T GDD DR +++S+G Sbjct: 270 AVERAIRRLDELGHIFE----------------EDGAVWLRTTAFGDDRDRVIVRSNGEP 313 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE-KKAQINVLLCELVR 390 Y + DL Y+ K ERGF+ I ++G+DH GY+ RL A+ A + + +L+ ++V Sbjct: 314 AYISGDLGYYLDKRERGFEQNIIMLGADHHGYIGRLMAMVEAFGDIPNVNLQILIGQMVN 373 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L RDG P+KMSKRAG +TL +VD VG D+ R+ ++ LD D + ++S ENP Sbjct: 374 LVRDGEPVKMSKRAGTIVTLDDLVDAVGVDAARYALVRSSTDSQLDVDLDLLAKRSNENP 433 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+YVQYA+AR RS+ A+ +D F ++ E+E L+ L E+PRV+ Sbjct: 434 VYYVQYAHARTRSVAANAER--AGVDRSAFKPELLTHETES-----ALLGGLQEFPRVVA 486 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT---MMRLQLVHAVA 567 A EP+++A + +LA ++H W R+ R + +T RL L A Sbjct: 487 QAAELSEPHRVARSIEELAGLYHA-WYAVRDGS-TRVIPLGEEPVTDAHRTRLWLNDATG 544 Query: 568 SIINSGLNIIGVESPNEM 585 ++ +GL ++GV +P M Sbjct: 545 QVLRNGLRLVGVSAPERM 562 >gi|307720328|ref|YP_003891468.1| arginyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294] gi|306978421|gb|ADN08456.1| arginyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294] Length = 531 Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 186/570 (32%), Positives = 303/570 (53%), Gaps = 58/570 (10%) Query: 24 VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83 + +KI +V+E+PRD + GH +T A L++ L P+ IA+ + + + DV S Sbjct: 9 LREKIGREVVLEKPRDRSFGHFATPIAFSLAKELRKSPMVIADELASSFE-SSDVFSKVE 67 Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143 A KG++N LS +L + S + + E+ K K+ +EFVSANPTGP+H+GH R Sbjct: 68 AVKGYLNFRLSEDFLAEYASWALKNPSEFATQ--EKNQKILLEFVSANPTGPLHIGHARG 125 Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203 AV GDTL + GY++T EYY+NDAG QI+ L LS+ + L + + PE YY G Sbjct: 126 AVYGDTLYRMAKHLGYDITAEYYVNDAGNQIDLLGLSIQLHARDNLLDETVEYPESYYRG 185 Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE- 262 YL + +++ +K+ SE+ F +E + ++ +MKII DL LNI D F+ E Sbjct: 186 EYLDALARDVMEKFGSEI--FYDESRQRELALWAKDEVMKIIAKDLGDLNIFFDTFVYES 243 Query: 263 ---DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319 DD+ R ++ + Y +G ++ S GD+ Sbjct: 244 TLYDDWDR--------VMKKMGSGIYEKDG------------------KIWIASEAKGDE 277 Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 DR +++ DG TY A D+ Y K+ERG+D+ I + G+DH GY+ R++A + Sbjct: 278 KDRVVVREDGRPTYLAGDIVYHNQKFERGYDHYINIWGADHHGYIPRVKAAIEYLGYDSN 337 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439 ++ VLL ++V L +DG P KMSKRAG+ I + +V+E+G+D++RF+ +K+ L+FD Sbjct: 338 KLEVLLSQMVSLLKDGEPYKMSKRAGNVILMSDIVEEIGADALRFIFASKKSDTALEFDL 397 Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQA---KDIFPDLDFDLFPRNVIPQESEFDTSEL 496 + K+Q NP+FY+QYA+AR +++ +A K+ + N DT Sbjct: 398 AEFKKQDSSNPIFYIQYAHARIQTLLSKATLTKEDIANASLKNLGENA-------DT--- 447 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 L+ P VIE+A ++ KL YL LA+ H + R + + Sbjct: 448 -LLFDALLLPEVIEDAFNTRQVQKLTDYLKSLAASLHKFYYDVR-------MIGTEDEAK 499 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEMS 586 +++L L+ VA I +GL+++G+++ ++MS Sbjct: 500 LLKLMLM--VALSIKTGLSLMGIDAKDKMS 527 >gi|39932124|sp|Q7W0K0|SYR_BORPE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS Length = 560 Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 184/574 (32%), Positives = 300/574 (52%), Gaps = 59/574 (10%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGK 86 ++ +ERP+ AHG ++TN AM L++P +P +A+ IV + P + IAG Sbjct: 27 QVQLERPKVAAHGDIATNVAMQLAKPARRNPRELAQGIVDALMAQPQARELIQDAEIAGP 86 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GFIN L+P+ + ++ ++ YGR G KV +EFVSANPTGP+HVGH R A + Sbjct: 87 GFINFRLTPAARQAVVQAVASQADAYGR-APRNGEKVLVEFVSANPTGPLHVGHARQAAL 145 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206 GD + L SG++VTRE+Y NDAG QI+ LA+SV R + + + D P Y G Y+ Sbjct: 146 GDAICRLYDASGWDVTREFYYNDAGNQIDNLAISVQAR-GRGIAPDAPDYPADGYKGDYI 204 Query: 207 KHVGKELADKYSSE------LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 + ++ A + S + + + L ++ ++V + + DL+A + D + Sbjct: 205 VEIARDFAARKSVQASDGQPVTATGDLDSLDDIRAFAVAYLRREQDLDLQAFGLAFDNYF 264 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV--GD 318 E + +++ +D L +G+ YE + L R+T + GD Sbjct: 265 LESSLYAS--GRVQETVDTLVAKGHTYE----------------EGGALWLRTTELGTGD 306 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378 D DR + KS+G YTYF D+AY K K+ERGF + + + GSDH G V R+ A ++ Sbjct: 307 DKDRVMRKSEGGYTYFVPDVAYHKVKWERGFHHAVNIQGSDHHGTVARVRAGLQGLAGIP 366 Query: 379 AQINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437 +L ++V++ R G +K+SKRAG ++T+R ++D VG D+VR+ ++ R+ F Sbjct: 367 KDFPAYVLHKMVKVMRGGEEVKISKRAGSYVTMRDLIDWVGRDAVRYFLIQRRADTEFVF 426 Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT---- 493 D +S ENPV+Y+QYA+AR ++ + ++ ++ DT Sbjct: 427 DIDLALSKSDENPVYYIQYAHARICTMIGNSGASAAEI-------------AQADTALLT 473 Query: 494 --SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551 SE L+ LAE+P+V+ A P+ +AF+L D AS FH ++ R V + Sbjct: 474 APSEYALLQRLAEFPQVVALAAQELAPHHVAFWLRDCASDFHAWYNAER-------VLVD 526 Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L + RL+L ++ +GL ++GV +P+ M Sbjct: 527 EPALKLARLRLAATTRQVLANGLALLGVSAPDRM 560 >gi|332977286|gb|EGK14077.1| arginine--tRNA ligase [Psychrobacter sp. 1501(2011)] Length = 609 Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 197/603 (32%), Positives = 307/603 (50%), Gaps = 80/603 (13%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFIN 90 I R + HG ++N A+ ++ +P +AE ++A + PD DS+ +AG GFIN Sbjct: 36 ITRSKSPEHGDYASNIALTAAKAAKSNPRALAEQLIAAL---PDNDSIAKLEVAGPGFIN 92 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 ++L+ +L +I + YG K+ +EFVSANPT +HVGH R A G ++ Sbjct: 93 IFLNTGAKFAVLDAIFDNNERYGLTDEFSDKKIQVEFVSANPTSSLHVGHGRGAAFGMSV 152 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+L+ GY+VTREYY+NDAG Q++ LA S + RY + L P G Y G Y+ + Sbjct: 153 ANLLEAVGYKVTREYYVNDAGRQMDILAASTYLRYLE-LNGEQVHFPVGGYQGDYVTDIA 211 Query: 211 KELADK--------YSSELLNFPEEKWLPIVKD-------------------YSVQAM-- 241 + + + Y+ N PE+ D S QA+ Sbjct: 212 QTIKTQQADAYVHPYAEISANVPEDAVFETNADGEQELVSGDKNAHVDGIIANSKQALGD 271 Query: 242 -------------MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288 ++ I+DDL ++ + + SE I ++ L +GY+YE Sbjct: 272 NYEIFLNAALSEILEDIKDDLNDFGVRFERWFSEKSI----ADEIEPVLAELESKGYLYE 327 Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG 348 K T FRST GD+ DR + +++G TYFA+D+AY K K+ERG Sbjct: 328 ------KDGNT----------WFRSTDFGDEKDRVVRRANGLTTYFASDIAYHKNKFERG 371 Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 FD +I V G+DH GY+ R+ A A+ + ++ V+L + V L+R I+MS R+G F+ Sbjct: 372 FDTVINVWGADHHGYIARVRAALTALGIDEKRLEVILVQFVALWRGEEKIQMSSRSGKFV 431 Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ- 467 TLR + +EVG+D+ RF + RK +DFD K QSK+N V+Y+QYA+AR S+ + Sbjct: 432 TLRELREEVGNDAARFYYVARKPEVHIDFDLELAKSQSKDNAVYYIQYAHARVCSVLEKL 491 Query: 468 -AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 AK D +N++ E+E +LI LA YP ++ A +P+ L YL Sbjct: 492 NAKGFNVDDAQGKAMQNLLQAEAES-----ELIKLLAAYPATLKRAATGYDPHVLTNYLK 546 Query: 527 DLASVFHGHWSHGRENPR--LRFVQANNRKLTMM--RLQLVHAVASIINSGLNIIGVESP 582 DLAS+FH ++ R P + + +L +M RL+L AV ++ +GL+++G+ +P Sbjct: 547 DLASLFHAWYNDNRILPVSIIADEKPTQEELDLMQARLRLSKAVRQVLANGLSLLGLSAP 606 Query: 583 NEM 585 M Sbjct: 607 TNM 609 >gi|33598837|ref|NP_886480.1| arginyl-tRNA synthetase [Bordetella parapertussis 12822] gi|39932125|sp|Q7W2Q2|SYR_BORPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|33574967|emb|CAE39631.1| arginyl-tRNA synthetase [Bordetella parapertussis] Length = 561 Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 187/578 (32%), Positives = 302/578 (52%), Gaps = 66/578 (11%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGK 86 ++ +ERP+ AHG ++TN AM L++P +P +A+ IV + P + IAG Sbjct: 27 QVQLERPKVAAHGDIATNVAMQLAKPARRNPRELAQGIVDALMAQPQARELIQDAEIAGP 86 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GFIN L+P+ + ++ ++ YGR G KV +EFVSANPTGP+HVGH R A + Sbjct: 87 GFINFRLTPAARQAVVQAVASQADAYGR-APRNGEKVLVEFVSANPTGPLHVGHARQAAL 145 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206 GD + L SG++VTRE+Y NDAG QI+ LA+SV R + + + D P Y G Y+ Sbjct: 146 GDAICRLYDASGWDVTREFYYNDAGNQIDNLAISVQAR-GRGIAPDAPDYPTDGYKGDYI 204 Query: 207 KHVGKELADKYSSE------LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 + ++ A + S + + + L ++ ++V + + DL+A + D + Sbjct: 205 VEIARDFAARKSVQASDGQPVTATGDLDSLDDIRAFAVAYLRREQDLDLQAFGLAFDNYF 264 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV--GD 318 E + +++ +D L +G+ YE + L R+T + GD Sbjct: 265 LESSLYAS--GRVQETVDTLVAKGHTYE----------------EGGALWLRTTELGTGD 306 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378 D DR + KS+G YTYF D+AY K K+ERGF + + + GSDH G V R V A + + Sbjct: 307 DKDRVMRKSEGGYTYFVPDVAYHKVKWERGFHHAVNIQGSDHHGTVAR---VRAGLQGLE 363 Query: 379 AQI-----NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433 A I +L ++V++ R G +K+SKRAG ++T+R ++D VG D+VR+ ++ R+ Sbjct: 364 AGIPKDFPAYVLHKMVKVMRGGEEVKISKRAGSYVTMRDLIDWVGRDAVRYFLIQRRADT 423 Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493 FD +S ENPV+Y+QYA+AR ++ + ++ ++ DT Sbjct: 424 EFVFDIDLALSKSDENPVYYIQYAHARICTMIGNSGASAAEI-------------AQADT 470 Query: 494 ------SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 SE L+ LAE+P+V+ A P+ +AF+L D AS FH ++ R Sbjct: 471 ALLTAPSEYALLQRLAEFPQVVALAAQELAPHHVAFWLRDCASDFHAWYNAER------- 523 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V + L + RL+L ++ +GL ++GV +P+ M Sbjct: 524 VLVDEPALKLARLRLAATTRQVLANGLALLGVSAPDRM 561 >gi|307297805|ref|ZP_07577611.1| arginyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2] gi|306917065|gb|EFN47447.1| arginyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2] Length = 543 Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 200/585 (34%), Positives = 304/585 (51%), Gaps = 49/585 (8%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 F +L+N +K++ + + +D +E P + G LSTNAA ILSR L P IA Sbjct: 2 FKEKLENSIKKVLEEFDIYDDKID-FKVEIPPE-GFGDLSTNAAFILSRILKKSPREIAN 59 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG-TKVNI 125 +I R+ + D V +AG GFIN+ S +YL +L+ ++ + + R KG T++ Sbjct: 60 IICDRLGNEADYSRVEVAGPGFINVDFSITYLSSVLAELIDAPDFWKR----KGDTRIQF 115 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EF SANPTGP VGH R AV GD L + + GY V RE YINDAG QI L S++ RY Sbjct: 116 EFASANPTGPFTVGHGRQAVFGDVLCRVFSCRGYGVHREMYINDAGRQIGLLGRSLWVRY 175 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245 Q L + +LPE Y G YL + + LA + + K Y++ M++ I Sbjct: 176 NQYL-GVEEELPEDGYQGEYLIDIARGLAGEIGERFKAVWNSEAEAFFKKYALDKMLEDI 234 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 LK L ++ D E D + +I L R+ +YE + Sbjct: 235 MGTLKRLRVEFDNVFFESSLI--DDGTVDSVIGMLERKELIYES---------------E 277 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365 + L S V DD D+ L++S+GSYTYF D+AY K++RGF + + G+DH G++ Sbjct: 278 GARWLKVSNFVEDD-DKVLVRSNGSYTYFMTDIAYHYNKHDRGFKKVFDIWGADHMGHIP 336 Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR-F 424 R+ A A+ + +NV++ + V L R+G +KMS R G+F TL +V+ VG DS R F Sbjct: 337 RMNAAMKALGIEDGFLNVIVHQYVNLKREGEVVKMSTRRGEFTTLDELVEAVGVDSTRYF 396 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 ++ ++ +L FD +++S +NPVFYVQYA AR ++FR AK+ +NV Sbjct: 397 FAMFDPDTHML-FDIDLARQRSNDNPVFYVQYANARISNVFRTAKE-----------KNV 444 Query: 485 IPQESE---FDTSELQLIVHLAE-YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 D+ E + I+ L +P ++++ +L YL DL+ FHG+++ Sbjct: 445 KRSRDSLELLDSQEDRRIIKLLTIFPEILDSVVADYRTNRLTSYLEDLSRAFHGYYNKN- 503 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V N L+ RL L A+ +I+ SGL ++GVE+P+ M Sbjct: 504 -----IIVDPENPALSGARLALCEAIQNILRSGLELLGVEAPDSM 543 >gi|33603912|ref|NP_891472.1| arginyl-tRNA synthetase [Bordetella bronchiseptica RB50] gi|39932133|sp|Q7WDQ0|SYR_BORBR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|33568888|emb|CAE35302.1| arginyl-tRNA synthetase [Bordetella bronchiseptica RB50] Length = 561 Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 187/578 (32%), Positives = 302/578 (52%), Gaps = 66/578 (11%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGK 86 ++ +ERP+ AHG ++TN AM L++P +P +A+ IV + P + IAG Sbjct: 27 QVQLERPKVAAHGDIATNVAMQLAKPARRNPRELAQGIVDALMAQPQARELIQDAEIAGP 86 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GFIN L+P+ + ++ ++ YGR G KV +EFVSANPTGP+HVGH R A + Sbjct: 87 GFINFRLTPAARQAVVQAVASQADAYGR-APRNGEKVLVEFVSANPTGPLHVGHARQAAL 145 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206 GD + L SG++VTRE+Y NDAG QI+ LA+SV R + + + D P Y G Y+ Sbjct: 146 GDAICRLYDASGWDVTREFYYNDAGNQIDNLAISVQAR-GRGIAPDAPDYPADGYKGDYI 204 Query: 207 KHVGKELADKYSSE------LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 + ++ A + S + + + L ++ ++V + + DL+A + D + Sbjct: 205 VEIARDFAARKSVQASDGQPVTATGDLDSLDDIRAFAVAYLRREQDLDLQAFGLAFDNYF 264 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV--GD 318 E + +++ +D L +G+ YE + L R+T + GD Sbjct: 265 LESSLYAS--GRVQETVDTLVAKGHTYE----------------EGGALWLRTTELGTGD 306 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378 D DR + KS+G YTYF D+AY K K+ERGF + + + GSDH G V R V A + + Sbjct: 307 DKDRVMRKSEGGYTYFVPDVAYHKVKWERGFHHAVNIQGSDHHGTVAR---VRAGLQGLE 363 Query: 379 AQI-----NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433 A I +L ++V++ R G +K+SKRAG ++T+R ++D VG D+VR+ ++ R+ Sbjct: 364 AGIPKDFPAYVLHKMVKVMRGGEEVKISKRAGSYVTMRDLIDWVGRDAVRYFLIQRRADT 423 Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493 FD +S ENPV+Y+QYA+AR ++ + ++ ++ DT Sbjct: 424 EFVFDIDLALSKSDENPVYYIQYAHARICTMIGNSGASAAEI-------------AQADT 470 Query: 494 ------SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 SE L+ LAE+P+V+ A P+ +AF+L D AS FH ++ R Sbjct: 471 ALLTAPSEYALLQRLAEFPQVVALAAQELAPHHVAFWLRDCASDFHAWYNAER------- 523 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V + L + RL+L ++ +GL ++GV +P+ M Sbjct: 524 VLVDEPALKLARLRLAATTRQVLANGLALLGVSAPDRM 561 >gi|326315293|ref|YP_004232965.1| arginyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372129|gb|ADX44398.1| arginyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 604 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 194/614 (31%), Positives = 304/614 (49%), Gaps = 78/614 (12%) Query: 23 KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----V 78 K+ R E P+ AHG + AAM L++PL L+P + E + A ++ P V Sbjct: 18 KLSPGAAGRAAFESPKVAAHGDFACTAAMQLAKPLKLNPRALGEQLKAALEATPAFARWV 77 Query: 79 DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138 D++ IAG GF+N+ L + ++I+ ++ +G +G G +V +EFVSANPTGP+HV Sbjct: 78 DAIEIAGPGFLNIRLKAAAKQEIVREVLAAGDRFGYQK-DNGQRVLVEFVSANPTGPLHV 136 Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ-----QALYNND 193 GH R A +GD + +L A G+ V REYY NDAG QI TLA S R + + D Sbjct: 137 GHGRQAALGDAICNLFATQGWSVHREYYYNDAGVQIETLAKSTQLRAKGFKPGDECWPTD 196 Query: 194 SDLP--EGYYPGVYLKHVGKELADKYSSE------LLNFPEEKWLPIVKDYSVQAMMKII 245 + P + +Y G Y++ + + K + + N E + I + ++V + Sbjct: 197 PENPASKAFYNGEYIQDIANDFLAKKTVQAEDRAFTANGDVEDYDNI-RQFAVAYLRNEQ 255 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 DL+A N+ D + E + + + L +G+ YE Sbjct: 256 DKDLRAFNLHFDQYYLESSLYTS--GRVEATVKRLVEKGHTYE----------------Q 297 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365 L RST GDD DR + K DG+YTYF D+AY K+ERGF ++ + G+DH G + Sbjct: 298 DGALWLRSTDYGDDKDRVMRKKDGTYTYFVPDVAYHISKWERGFAKVVNIQGTDHHGTIA 357 Query: 366 RLEA--VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 R+ A AA V + + +L +VR+ + G +K+SKRAG ++TLR +++ D+VR Sbjct: 358 RVRAGLQAADVGIPQGYPDYVLHTMVRVVKGGEEVKISKRAGSYVTLRDLIEWTSKDAVR 417 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR----QAKDIFPDLDFDL 479 F +L RK FD Q+ +NPV+YVQYA+AR +S+ R A+ PD+ Sbjct: 418 FFLLSRKPDTEYTFDVDLAVAQNNDNPVYYVQYAHARIQSVLRAAVAHARGDRPDVSGGQ 477 Query: 480 FPRNVIPQ------ESEFDTS-----EL-----------------QLIVHLAEYPRVIEN 511 + P E DTS EL L++ LA+YP ++ Sbjct: 478 LEKLSAPDALNDVGEHVTDTSLSSACELLDLGNADLSPLEGQQAQALMLQLAKYPEMLAA 537 Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571 A + P+ + FYL DLA+ +H ++ R + ++ + RL LV A A +++ Sbjct: 538 AAEGEAPHDVTFYLRDLAASYHSYYDAER-------ILVDDEAVKRARLALVAATAQVLH 590 Query: 572 SGLNIIGVESPNEM 585 +GL ++GV +P M Sbjct: 591 NGLAVLGVSAPARM 604 >gi|221070006|ref|ZP_03546111.1| arginyl-tRNA synthetase [Comamonas testosteroni KF-1] gi|220715029|gb|EED70397.1| arginyl-tRNA synthetase [Comamonas testosteroni KF-1] Length = 571 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 181/576 (31%), Positives = 298/576 (51%), Gaps = 59/576 (10%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKGFI 89 E P+ AHG + AAM L++PL +P + E + ++ VD++ IAG GF+ Sbjct: 31 FENPKVAAHGDFACTAAMQLAKPLKANPRALGEQLKTALEATAAFQQWVDAIEIAGPGFL 90 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N+ L P+ ++++ ++ ++G +G + +EFVSANPTGP+HVGH R A +GD Sbjct: 91 NIRLKPAAKQEVVREVLAQAEKFGYQ-ADRGENILVEFVSANPTGPLHVGHGRQAAIGDA 149 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ-----QALYNNDSDLP--EGYYP 202 +++L + G++V RE+Y NDAG QI+TL S R + + DSD P + +Y Sbjct: 150 ISNLYSSQGWKVHREFYYNDAGVQIDTLTKSTQLRAKGFKPGDECWPTDSDNPLAKNFYN 209 Query: 203 GVYLKHVGKELADKYS-----SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257 G Y+ + K +K + E + + ++ ++V + DL+A N++ D Sbjct: 210 GDYIADIAKAFLNKETIKADDREFTANGDVEDYDNIRQFAVAYLRNEQDKDLQAFNLKFD 269 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 + E + + ++ L G YE L RST G Sbjct: 270 EYYLESSLYEN--GHVEATVNRLIANGKTYE----------------QDGALWLRSTDYG 311 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVS 375 DD DR + K+DG YTYF D+AY K++RGF ++ + G+DH G + R+ A AA V Sbjct: 312 DDKDRVMRKTDGGYTYFVPDVAYHIQKFKRGFTKVVNIQGTDHHGTIARVRAGLQAADVG 371 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435 + + +L +VR+ R+G +K+SKRAG ++TLR +++ D+VRF +L RK Sbjct: 372 IPEGYPDYVLHTMVRVVRNGEEVKISKRAGSYVTLRDLIEWTSKDAVRFFLLSRKPDTEY 431 Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495 FD Q+ +NPV+YVQYA+AR +S+ R ++ +P + D S Sbjct: 432 TFDVDLAVAQNNDNPVYYVQYAHARIQSVLRAWQEA---------GGAGVPALKDVDLSA 482 Query: 496 LQ------LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549 L+ L++ LA+YP ++ A P+ + FYL DLAS +H ++ R + Sbjct: 483 LEGPQAQALMLLLAKYPEMLTAAAEGNAPHDVTFYLRDLASSYHSYYDAER-------IL 535 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ K+ + RL LV A A ++++GL ++GV +P M Sbjct: 536 VDDEKVKLARLALVAATAQVLHNGLAVLGVSAPERM 571 >gi|113866190|ref|YP_724679.1| arginyl-tRNA synthetase [Ralstonia eutropha H16] gi|123134540|sp|Q0KFB0|SYR_RALEH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|113524966|emb|CAJ91311.1| Arginyl-tRNA synthetase [Ralstonia eutropha H16] Length = 595 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 203/603 (33%), Positives = 297/603 (49%), Gaps = 80/603 (13%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIA 84 L + ERP+ AHG L+ N AM ++R L +P +A+ IV ++ D V ++ IA Sbjct: 27 LPAVTFERPKVAAHGDLACNVAMQVARALKSNPRELAQRIVDAVQADTRAQGLVQAMEIA 86 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 G GFINL L+P+ +L +++ G YG G +V +EFVSANPTGP+HVGH R A Sbjct: 87 GPGFINLRLTPAAKADVLRAVLAEGDHYGARERGVHGQVLVEFVSANPTGPLHVGHGRQA 146 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204 +GD LA+L+++ G+ V RE+Y NDAG QI TLALSV R + L D+ PE Y G Sbjct: 147 ALGDALANLLSWQGWHVHREFYYNDAGVQIQTLALSVQAR-ARGLKPGDASWPEAAYNGD 205 Query: 205 YLKHVGKE-LADKYSSELLNFPEEKWLPI-----VKDYSVQAMMKIIRDDLKALNIQHDI 258 Y+ + + LA K S P + ++ ++V + DL+A ++ D Sbjct: 206 YIADIAADFLAGKTVSASDGEPVTASGNVEDIDSIRKFAVTYLRNEQDIDLQAFGVKFDR 265 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + E + + + +L +G YE L R+T GD Sbjct: 266 YYLESSLY--SDGRVEAAVQSLVGKGKTYE----------------SEGALWLRTTDDGD 307 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378 D DR + KSDG+YTYF D+AY K+ERGF +I V GSDH G + R+ A + Sbjct: 308 DKDRVMKKSDGTYTYFVPDVAYHTTKWERGFTKVINVQGSDHHGTIARVRAGLQGLDMGI 367 Query: 379 AQ--INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV------DEV------------- 417 Q + +L ++V + ++G +K+SKRAG ++T+R ++ DE Sbjct: 368 PQGYPDYVLHKMVTVMKNGEEVKISKRAGSYVTVRDLIEWSNGGDETIRGCLDTGVADWP 427 Query: 418 -----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF------- 465 G D+VRF +L RK FD +Q+ ENPV+YVQYA+AR SIF Sbjct: 428 QHFTRGRDAVRFFLLSRKADTEFVFDVDLALKQNDENPVYYVQYAHARICSIFESWGGAD 487 Query: 466 ---RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 R A+ DL P E L LAE+P ++ A P+ +A Sbjct: 488 WEARLAELAGADLSAVTGP--------EASAQAQALGRRLAEFPDMLSGAAAELAPHAVA 539 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 FYL DLA FH ++ R V ++ + RL L+ A ++ +GL +IGV +P Sbjct: 540 FYLRDLAGDFHAFYNADR-------VLVDDEAVKRARLALLAATRQVLRNGLAVIGVSAP 592 Query: 583 NEM 585 M Sbjct: 593 RRM 595 >gi|319764740|ref|YP_004128677.1| arginyl-tRNA synthetase [Alicycliphilus denitrificans BC] gi|330826956|ref|YP_004390259.1| arginyl-tRNA synthetase [Alicycliphilus denitrificans K601] gi|317119301|gb|ADV01790.1| arginyl-tRNA synthetase [Alicycliphilus denitrificans BC] gi|329312328|gb|AEB86743.1| arginyl-tRNA synthetase [Alicycliphilus denitrificans K601] Length = 567 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 190/577 (32%), Positives = 297/577 (51%), Gaps = 57/577 (9%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGK 86 R E P+ AHG L+ AAM L++PL +P + E + A ++ P VD + IAG Sbjct: 26 RAAFESPKVAAHGDLACTAAMQLAKPLKQNPRALGEQLKAALEATPAFAQWVDVIEIAGP 85 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GF+N+ L + ++++ ++ G +G +G KV +EFVSANPTGP+HVGH R A + Sbjct: 86 GFLNIRLKNAAKQQVVREVLAQGTRFGMQ-PARGEKVLVEFVSANPTGPLHVGHGRQAAI 144 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ-----QALYNNDSDLP--EG 199 GD +++L A G++V RE+Y NDAG QI+TL S R + + D+D P + Sbjct: 145 GDAISNLYATQGWQVHREFYYNDAGVQIDTLTKSTQLRAKGFKPGDDCWPTDADNPLAKN 204 Query: 200 YYPGVYLKHVGKELADKYSSE------LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN 253 +Y G Y++ + K + + N E + I + ++V + DL+A N Sbjct: 205 FYNGDYIQDIANAFLAKATVKADDRAFTANGDVEDYDNI-RQFAVAYLRNEQDKDLQAFN 263 Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313 ++ D + E + + + L G YE L RS Sbjct: 264 LRFDEYYLESSLYAN--GHVDATVARLIANGKTYE----------------QDGALWLRS 305 Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VA 371 T GDD DR + K DGSYTYF D+AY K++RGF ++ + G+DH G + R+ A A Sbjct: 306 TDYGDDKDRVMRKQDGSYTYFVPDVAYHIQKWQRGFRKVVNIQGTDHHGTIARVRAGLQA 365 Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431 A V + + +L +VR+ R G +K+SKRAG ++TLR +++ D+VRF +L RK Sbjct: 366 ADVGIPQGYPDYVLHTMVRVVRGGEEVKISKRAGSYVTLRDLIEWTSKDAVRFFLLSRKP 425 Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK---DIFPDLDFDLFPRNVIPQE 488 FD Q+ +NPV+YVQYA+AR S+ R + D+ D DL P PQ Sbjct: 426 DTEYTFDVDLAVAQNNDNPVYYVQYAHARICSVLRGWREDCDVGALTDVDLSPLEG-PQA 484 Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548 L++ LA+YP ++ A P+ + FYL DLA+ +H ++ R + Sbjct: 485 QA-------LMLLLAKYPEMLAAAAAGNAPHDVTFYLRDLAAAYHSYYDAER-------I 530 Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + + RL LV A A ++++GL ++GV +P M Sbjct: 531 LVDDEPVRLARLALVAATAQVLHNGLAVLGVSAPARM 567 >gi|261368273|ref|ZP_05981156.1| arginine--tRNA ligase [Subdoligranulum variabile DSM 15176] gi|282569790|gb|EFB75325.1| arginine--tRNA ligase [Subdoligranulum variabile DSM 15176] Length = 585 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 202/571 (35%), Positives = 296/571 (51%), Gaps = 37/571 (6%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSVFIAGKG 87 L ++E P D +G +++N AM +R P IAE I A++ ++ + V IAG G Sbjct: 38 LPDFIVEIPADVKNGDVASNLAMAGARVFHKAPRQIAEAITAKLDLNGTLFAGVDIAGPG 97 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FINL+L + +L + + EYGR G G + N+EFVSANPTGPMH+G+ R +G Sbjct: 98 FINLFLGQDWFTSVLRA-ACANPEYGRTDAGAGKRYNVEFVSANPTGPMHMGNARGGALG 156 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD--LPEGYYPGVY 205 D LA+ + ++GY+VTRE+YINDAG QI S+ RY Q LY + LP Y G Sbjct: 157 DCLAACLDWAGYDVTREFYINDAGNQIEKFGKSLAIRYLQ-LYKGEEACPLPAECYQGAD 215 Query: 206 LKHVGKELADKYSSELLNFP-EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 + KE A+ + +N EE IV D + + + RD L IQ+D++ E D Sbjct: 216 IIQRAKEFAEVHGDAYVNADFEELKKAIVADALPKNIAGLQRD-LGKYRIQYDVWFHESD 274 Query: 265 FHRGDPSPIRDIIDNLARQGYVY---EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD-- 319 H+ ++ ++D L G Y +G + ++ K + K R T G + Sbjct: 275 LHK--SGAVQAVVDKLLETGACYKAEDGAIMYRSAQYAAKYGVANK----RKTEDGSEEE 328 Query: 320 -VDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 D L++++G TYFAAD+AY K RGFD I V G+DH G+V R++ A+ Sbjct: 329 AKDEVLVRANGIPTYFAADIAYHYNKLAVRGFDKAIDVWGADHHGHVARMKGAMDAIGLH 388 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437 Q++V+L ++V L RDG P++MSKR G ITL ++DEV DS RF R++S LDF Sbjct: 389 GEQLDVVLMQMVNLMRDGKPVRMSKRTGKAITLTDLLDEVPIDSARFFFNQRESSSTLDF 448 Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTS 494 D ENPV+YVQYA+AR S+ ++ ++ F +D I D S Sbjct: 449 DLDLAVRNDSENPVYYVQYAHARICSLLKKLEEQGVAFQGVD-------SIDASVLTDPS 501 Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554 E LI LA +P I A +P ++ Y D+A+ FH ++ R VQ N Sbjct: 502 EQALIRLLAAFPAEIVAAADKYDPARITRYCIDVATAFHRFYNACRILDAEGAVQQN--- 558 Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R+ L AV +I++ L + V +P M Sbjct: 559 ----RIALSLAVRGVIHNILTMFKVNAPESM 585 >gi|119026436|ref|YP_910281.1| arginyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703] gi|166232759|sp|A1A3B6|SYR_BIFAA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|118766020|dbj|BAF40199.1| arginyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703] Length = 596 Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 185/595 (31%), Positives = 314/595 (52%), Gaps = 74/595 (12%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 + + RP+D AHG ++NAAM L++ G+ P +AEL A + + SV +AG GFIN Sbjct: 36 KFAVMRPKDRAHGDWASNAAMQLAKKAGMKPRDLAELFAAELTNADGIKSVEVAGPGFIN 95 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + L + ++ +++ +G +YG+N G +N+EFVSANPTGP+H+G R A VGD++ Sbjct: 96 ITLDSASAAAVVDTVLEAGSDYGKNDHLSGKTLNLEFVSANPTGPIHIGGTRWAAVGDSM 155 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A ++ +G +V REYY ND G QIN A S+ A + ++ P Y G Y+ + Sbjct: 156 ARVLEANGAKVVREYYFNDHGEQINRFAKSLV----AAAHGEET--PIDGYKGAYIDEIA 209 Query: 211 KELADKYSS---ELLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDLKA 251 K + D+ ++ ++L+ P ++ P+ + S Q M I+ +K Sbjct: 210 KRVIDEANADGVDVLSLPRVDGGADQDGNPLGEGDSEQREEFRKRAVPMMFDEIQRSMKN 269 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 + D++ E+ + + I +L +G ++E K T F Sbjct: 270 FRVNFDVWFHENSLYS--DGEVDQAIADLRARGDIFE------KDGAT----------WF 311 Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLE 368 ST GDD DR ++KSDG+Y YFAAD+AY++ K R D IY++G+DH GY+ R+ Sbjct: 312 ESTKHGDDKDRVIIKSDGNYAYFAADIAYYRNKRHRETNPADVAIYMLGADHHGYIGRMM 371 Query: 369 AVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 A+ A +K + + +L+ +LV + +DG ++MSKRAG+ +T+ + D +G D+ R+ + Sbjct: 372 AMCEAFGDKPGENMQILIGQLVNVMKDGKAVRMSKRAGNVVTIDDLTDAIGVDASRYSLA 431 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNV 484 + +D D + S ENPV+YVQYA+AR ++ R A + D L Sbjct: 432 RTDYNSPVDIDLNLLSSHSNENPVYYVQYAHARSCNVDRNAAAAGITYEGADVSLLDT-- 489 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR---- 540 T++ +++ LA++P ++ A + P+++A YL DLA+ +H ++ R Sbjct: 490 --------TADGEVLAALAQWPALLREAGDLRAPHRVAHYLEDLAATYHKWYNVERVVPM 541 Query: 541 --ENPRLRFVQANNRKL--------TMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +P R QA+ ++ RL+L AV ++I GL+++GV +P++M Sbjct: 542 ELTDPEARGEQADAIRIAKAPEPARAAARLKLNDAVKTVIAEGLDLLGVTAPDKM 596 >gi|212715297|ref|ZP_03323425.1| hypothetical protein BIFCAT_00189 [Bifidobacterium catenulatum DSM 16992] gi|212661754|gb|EEB22329.1| hypothetical protein BIFCAT_00189 [Bifidobacterium catenulatum DSM 16992] Length = 616 Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 185/596 (31%), Positives = 307/596 (51%), Gaps = 76/596 (12%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 + + RP+D AHG ++NAAM L++ G+ P AEL A + + SV +AG GFIN Sbjct: 56 KFAVMRPKDRAHGDWASNAAMQLAKKAGMKPRDFAELFAAELANADGIKSVEVAGPGFIN 115 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + L + ++ +++ G YG+N G +N+EFVSANPTGP+H+G R A VGD++ Sbjct: 116 IVLDSASAAAVVDTVLGEGTNYGKNDHLSGKTLNLEFVSANPTGPIHIGGTRWAAVGDSM 175 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A ++ +G +V REYY ND G QIN A S+ A + ++ P Y G Y+ + Sbjct: 176 ARVLEANGAKVVREYYFNDHGEQINRFAKSLV----AAAHGEET--PIDGYKGAYIDEIA 229 Query: 211 KELADKYSSE---LLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDLKA 251 + + D+ +++ +L+ P + P+ + S Q M + IR +K Sbjct: 230 RRVIDEANADGVAILDLPRVDGGVDNDGNPLGEGDSEQREEFRKRAVPMMFEEIRKSMKD 289 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 + D++ E+ + + I +L +G +YE K T F Sbjct: 290 FRVNFDVWFHENSLYS--DGEVDKAIADLRERGDIYE------KDGAT----------WF 331 Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKRLE 368 ST GDD DR ++KSDG+Y YFAAD+AY++ K R D IY++G+DH GY+ R+ Sbjct: 332 ESTKHGDDKDRVIIKSDGNYAYFAADIAYYRNKRHRDNDPADIAIYMLGADHHGYIGRMM 391 Query: 369 AVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 A+ AA ++ + + +L+ +LV + +DG ++MSKRAG+ +T+ + D +G D+ R+ + Sbjct: 392 AMCAAFGDEPGENMQILIGQLVNVLKDGKAVRMSKRAGNVVTIDDLTDAIGVDASRYSLA 451 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNV 484 + +D D + S ENPV+YVQYA+AR ++ R A + D L Sbjct: 452 RTDYNSPVDIDLNLLASHSNENPVYYVQYAHARSCNVDRNAAAAGITYEGADVSLLDT-- 509 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-------- 536 ++ +++ LA++P ++ A + P+++A YL DLA+ +H W Sbjct: 510 --------AADGEVLAALAQWPALLREAGDLRAPHRVAHYLEDLAATYH-KWYNVERVVP 560 Query: 537 -------SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + G + LR +A RL+L AV ++I GL+++GV +P+ M Sbjct: 561 MELTEPEARGEQAEALRIAKAPEPARAAARLKLNDAVKTVIAEGLDLLGVAAPDRM 616 >gi|120609117|ref|YP_968795.1| arginyl-tRNA synthetase [Acidovorax citrulli AAC00-1] gi|166232752|sp|A1TJ83|SYR_ACIAC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|120587581|gb|ABM31021.1| arginyl-tRNA synthetase [Acidovorax citrulli AAC00-1] Length = 569 Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 182/579 (31%), Positives = 298/579 (51%), Gaps = 59/579 (10%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGK 86 R E P+ AHG + AAM L++PL L+P + E + A ++ P VD++ IAG Sbjct: 26 RAAFESPKVAAHGDFACTAAMQLAKPLKLNPRALGEQLKAALEATPAFARWVDAIEIAGP 85 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GF+N+ L + ++I+ ++ +G +G G +V +EFVSANPTGP+HVGH R A + Sbjct: 86 GFLNIRLKAAAKQEIVREVLSAGDRFGYQK-DNGQRVLVEFVSANPTGPLHVGHGRQAAL 144 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ-----QALYNNDSDLP--EG 199 GD + +L + G+ V RE+Y NDAG QI+TL S R + + D + P + Sbjct: 145 GDAICNLFSTQGWSVHREFYYNDAGVQIDTLTKSTQLRARGFKPGDECWPTDPENPASKT 204 Query: 200 YYPGVYLKHVGKELADKYS-----SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254 +Y G Y++ + + K + E + + ++ ++V + DL+A N+ Sbjct: 205 FYNGDYIQDIANDFLAKKTVKADDREFTANGDVEDYDNIRQFAVAYLRNEQDKDLQAFNL 264 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 D + E + + ++ L +G+ YE L +ST Sbjct: 265 HFDQYYLESSLYTS--GRVEATVNRLVEKGHTYE----------------QDGALWLKST 306 Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAA 372 GDD DR + K DG+YTYF D+AY K+ERGF ++ + G+DH G + R+ A AA Sbjct: 307 DYGDDKDRVMRKKDGTYTYFVPDVAYHIAKWERGFAKVVNIQGTDHHGTIARVRAGLQAA 366 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 V + + +L +VR+ + G +K+ KRAG ++TLR +++ D+VRF +L RK Sbjct: 367 DVGIPQGYPDYVLHTMVRVVKGGKEVKIGKRAGSYVTLRDLIEWTSKDAVRFFLLSRKPD 426 Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ-----AKDIFPDLDFDLFPRNVIPQ 487 FD Q+ +NPV+YVQYA+AR +S+ R D+ D DL Sbjct: 427 TEYTFDVDLAVAQNNDNPVYYVQYAHARIQSVLRAWAEAGGGDVASLKDVDL-------- 478 Query: 488 ESEFDTSELQ-LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 S + + Q L++ LA+YP ++ A + P+ + FYL DLA+ +H ++ R Sbjct: 479 -SALEGPQAQALMLQLAKYPEMLTAAAEGEAPHDVTFYLRDLAASYHSYYDAER------ 531 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++ + RL LV A A ++++GL ++GV++P M Sbjct: 532 -ILVDDEAVKRARLALVAATAQVLHNGLKVLGVDAPARM 569 >gi|187922480|ref|YP_001894122.1| arginyl-tRNA synthetase [Burkholderia phytofirmans PsJN] gi|238689569|sp|B2SWV4|SYR_BURPP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|187713674|gb|ACD14898.1| arginyl-tRNA synthetase [Burkholderia phytofirmans PsJN] Length = 596 Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 191/587 (32%), Positives = 300/587 (51%), Gaps = 60/587 (10%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87 I +ERP+ AHG ++ N AM L++PL +P +A+ IV + P V++ +AG G Sbjct: 37 ITLERPKVAAHGDVACNVAMQLAKPLRANPRQLAQQIVDALLAQPQAKGLVEAAEVAGPG 96 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FINL L+ + + +++++ +GR+ G V IEFVSANPTGP+HVGH R A +G Sbjct: 97 FINLRLAAAAKQAVIAAVFAEKEAFGRSQRDAGKHVLIEFVSANPTGPLHVGHGRQAALG 156 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D L++++A GY+V RE+Y NDAG QI TLALS R + L D+ P Y G Y+ Sbjct: 157 DALSNVLASQGYDVHREFYYNDAGVQIQTLALSTQAR-ARGLAPGDAGWPASAYNGEYIA 215 Query: 208 HVGKE------LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 + ++ +A + + + L ++ ++V + + DL+A ++ D + Sbjct: 216 EIARDYLNGVTVAASDGEPVTGARDVEDLEAIRRFAVAYLRREQDMDLQAFGVKFDQYYL 275 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E ++ + ++ L G YE L R+T GDD D Sbjct: 276 ESSLYK--EGRVEKTVEALIAAGKTYE----------------QEGALWLRTTDDGDDKD 317 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKA 379 R + K+DG+YTYF D+AY K+ERGF +I V GSDH G + R+ A V K Sbjct: 318 RVMRKTDGTYTYFVPDVAYHVAKWERGFTKVINVQGSDHHGTIARVRAGLQGLGVGIPKG 377 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD---------------------EVG 418 + +L ++V + R+G +K+SKRAG ++T+R +++ G Sbjct: 378 YPDYILHKMVTVMRNGEEVKISKRAGSYVTVRDLIEWSGGATPGSEAAVDLIDEETIRRG 437 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+VRF ++ RK FD +Q+ ENPV YVQYA+AR S+ + K + + Sbjct: 438 RDAVRFFLISRKADTEFVFDIDLALKQNDENPVHYVQYAHARICSVIAECKARYSTDEST 497 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L +V P SE + L+ LAE+P ++++A P+ +AFYL DLA FH + Sbjct: 498 LADVDVSPLTSE---RAMALLNKLAEFPDMLQHAADELAPHAVAFYLRDLAGEFHSFY-- 552 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N R V ++ R+ L+ A ++ +GL IGV +P +M Sbjct: 553 ---NDRTERVLVDDAAERNARVALLAATRQVLANGLATIGVSAPVKM 596 >gi|312797448|ref|YP_004030370.1| Arginyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454] gi|312169223|emb|CBW76226.1| Arginyl-tRNA synthetase (EC 6.1.1.19) [Burkholderia rhizoxinica HKI 454] Length = 617 Score = 290 bits (742), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 200/593 (33%), Positives = 301/593 (50%), Gaps = 66/593 (11%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87 I ++RP+ AHG +++N AM L++PL +P +A+ + P + S +AG G Sbjct: 52 IALDRPKIAAHGDVASNLAMQLAKPLRANPRVLAQQLAEATLAHPRAAGLIASAEVAGPG 111 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYG---RNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 F+NL L+ + ++ + +I+ +G G G +V IEFVSANPTGP+HVGH R A Sbjct: 112 FLNLRLTDAAKQQTVHAILAQRERFGFAPPGRGGHGKQVLIEFVSANPTGPLHVGHGRQA 171 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204 +GD L +LM G+ V RE+Y NDAG QINTLALSV R + D+ PE Y G Sbjct: 172 ALGDALGALMQTQGWAVHREFYYNDAGVQINTLALSVQAR-ARGFKPGDAQWPEAAYNGD 230 Query: 205 YLKHVGKE-LADKYSSELLNFP-----EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y+ + ++ LA + S P + L ++ ++V + + DLKA ++ D Sbjct: 231 YIADIARDYLAGETVSASDGVPVTGAGDVDNLDAIRRFAVTYLRREQDIDLKAFGVKFDQ 290 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + E + D + + L G YE D L R+T GD Sbjct: 291 YYLESSLY--DEGRVERAVQALVAAGKTYE----------------DDGALWLRTTDYGD 332 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSE 376 D DR + K DG+YTYF D+AY K+ERGF +I V GSDH G + R+ A A + Sbjct: 333 DKDRVMRKQDGTYTYFVPDIAYHVTKWERGFTKVINVQGSDHHGTIARVRAGLQALDIGI 392 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV--------DEV----------- 417 + +L ++V + RDG IK+SKRAG ++T+R ++ DE Sbjct: 393 PSGYPDYVLHKMVTVMRDGREIKISKRAGSYVTVRDLIVWSGGGNSDESAASLSPQQLDS 452 Query: 418 -----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 G D+VRF ++ RK FD +Q+ ENPV+YVQYA+AR S+ + + + Sbjct: 453 DMLRKGRDAVRFFLISRKADTEFTFDIDLALKQNDENPVYYVQYAHARICSVLSELRARY 512 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 D D ++ P +E + LQ LAEYP+++E+A P+ +AFYL DLA F Sbjct: 513 TDGLEDWSQVDLTPLATERSKALLQ---KLAEYPQMLEHAANELAPHAVAFYLRDLAGEF 569 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H + N R V ++ + + R L+ A ++ +GL IGV +P +M Sbjct: 570 HSFY-----NDRAERVLVDDARERLARAALLAATRQVLANGLATIGVSAPEKM 617 >gi|225352613|ref|ZP_03743636.1| hypothetical protein BIFPSEUDO_04239 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156807|gb|EEG70201.1| hypothetical protein BIFPSEUDO_04239 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 616 Score = 290 bits (742), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 185/596 (31%), Positives = 306/596 (51%), Gaps = 76/596 (12%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 + + RP+D AHG ++NAAM L++ G+ P AEL A + + SV +AG GFIN Sbjct: 56 KFAVMRPKDRAHGDWASNAAMQLAKKAGMKPHDFAELFAAELANADGIKSVEVAGPGFIN 115 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + L + ++ +++ G YG+N G +N+EFVSANPTGP+H+G R A VGD++ Sbjct: 116 IVLDSASAAAVVDTVLNEGANYGKNDHLSGKTLNLEFVSANPTGPIHIGGTRWAAVGDSM 175 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A ++ +G +V REYY ND G QIN A S+ A + ++ P Y G Y+ + Sbjct: 176 ARVLEANGAKVVREYYFNDHGEQINRFAKSLV----AAAHGEET--PIDGYKGAYIDEIA 229 Query: 211 KELADKYSSE---LLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDLKA 251 + + D+ +++ +L+ P + P+ + S Q M IR +K Sbjct: 230 RRVIDEANADGIAILDLPRVDGGVDNDGNPLGEGDSEQREEFRKRAVPMMFDEIRKSMKD 289 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 + D++ E+ + + I +L +G +YE K T F Sbjct: 290 FRVNFDVWFHENSLYS--DGEVDKAIADLRERGDIYE------KDGAT----------WF 331 Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKRLE 368 ST GDD DR ++KSDG+Y YFAAD+AY++ K R D IY++G+DH GY+ R+ Sbjct: 332 ESTKHGDDKDRVIIKSDGNYAYFAADIAYYRNKRHRDNDPADIAIYMLGADHHGYIGRMM 391 Query: 369 AVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 A+ AA ++ + + +L+ +LV + +DG ++MSKRAG+ +T+ + D +G D+ R+ + Sbjct: 392 AMCAAFGDEPGENMQILIGQLVNVLKDGKAVRMSKRAGNVVTIDDLTDAIGVDASRYSLA 451 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNV 484 + +D D + S ENPV+YVQYA+AR ++ R A + D L Sbjct: 452 RTDYNSPVDIDLNLLASHSNENPVYYVQYAHARSCNVDRNAAAAGITYEGADVSLLDT-- 509 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-------- 536 ++ +++ LA++P ++ A + P+++A YL DLA+ +H W Sbjct: 510 --------AADGEVLAALAQWPALLREAGDLRAPHRVAHYLEDLAATYH-KWYNVERVVP 560 Query: 537 -------SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + G + LR +A RL+L AV ++I GL+++GV +P+ M Sbjct: 561 MELTDPEARGEQAEALRIAKAPEPARAAARLKLNDAVKTVIAEGLDLLGVAAPDRM 616 >gi|284045965|ref|YP_003396305.1| arginyl-tRNA synthetase [Conexibacter woesei DSM 14684] gi|283950186|gb|ADB52930.1| arginyl-tRNA synthetase [Conexibacter woesei DSM 14684] Length = 548 Score = 290 bits (742), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 187/558 (33%), Positives = 276/558 (49%), Gaps = 45/558 (8%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI--KIDPDVDSVFIAGKGFIN 90 +ERPR G STNAAM+L+ +G P IAE + A + ++ ++ +AG GF+N Sbjct: 31 TVERPRREGFGDYSTNAAMLLAPRVGKPPREIAEQLGAALQERLGGALERYEVAGPGFLN 90 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 L+L+ + L ++ +G +G +V +EFVSANPTGP+ R A GD L Sbjct: 91 LFLADDWYAGALQHVLGAGTRFGAGGATAPERVLVEFVSANPTGPVVAASGRHAAYGDAL 150 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A ++ F G+EV REYY+NDAG+QI L SV R + D+PEG Y G Y+ + Sbjct: 151 ARILEFHGHEVAREYYLNDAGSQIRKLGESVKARAR------GEDVPEGGYEGDYVVELA 204 Query: 211 KEL---ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 +E+ AD +EL +V M I+ L+ + +D F +E + Sbjct: 205 REIPGAADGDPAELARV------------AVGLMYGRIKATLERYGVTYDRFFNESSLYE 252 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 GDPSP++ L + G+ Y + D L R+T GDD DR L +S Sbjct: 253 GDPSPVKQAEAELEKLGHTY-------------RHD---DALWLRTTTFGDDKDRVLERS 296 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387 +G TYFA+D+AY + K ERGFD + V G+DH GYV RL+A A+ ++ +L+ Sbjct: 297 NGEPTYFASDVAYLESKRERGFDRQLNVFGADHHGYVGRLKAAFEALGGDPEKLEILIMR 356 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 LV G KMSKR G F TL ++DE+G D+ R+ ML R + LD D ++QS Sbjct: 357 LVHFVEGGEREKMSKRRGVFTTLDELLDELGVDATRYFMLQRSHDTALDLDLDLARKQSN 416 Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 ENPV+YVQYA+AR S+ +A + D +E L+ L +P Sbjct: 417 ENPVYYVQYAHARIASMLARAGADVVGGALASVAGGAGARSQALDPAERVLLKKLLAFPD 476 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 + A + P++L Y +LA F + R + A + R+ L Sbjct: 477 EVAEAAEKRAPHRLTAYALELAQDFTAFYRD------CRVLGAEGEGVEAYRIALSVTAQ 530 Query: 568 SIINSGLNIIGVESPNEM 585 I L ++GV +P+ M Sbjct: 531 RTIAQALGLLGVSAPDSM 548 >gi|28572571|ref|NP_789351.1| arginyl-tRNA synthetase [Tropheryma whipplei TW08/27] gi|81629852|sp|Q83HT0|SYR_TROW8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|28410703|emb|CAD67089.1| arginyl-tRNA synthetase [Tropheryma whipplei TW08/27] Length = 550 Score = 290 bits (742), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 181/561 (32%), Positives = 291/561 (51%), Gaps = 41/561 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + + RP +G + + + L+ L + IA+ I + + V V++A GFINL Sbjct: 24 VSLTRPPKPEYGDWALSLPLKLASLLKSPAIDIAQSIASALLELDGVQDVYVAKPGFINL 83 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 LS + I+S ++ G +GRN K+N+EFVS NPTGP+H+ H R A VGD++A Sbjct: 84 KLSREHTTGIISEVLEQGSSFGRNTTQSSKKINLEFVSGNPTGPLHLAHTRWAAVGDSIA 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ G +VTREYYIN+ G QI+ + SV Y +AL LP+ YPG Y+K + + Sbjct: 144 RILINCGADVTREYYINNVGNQIHLFSESV---YARAL---SKSLPKDGYPGEYVKDIAR 197 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 + ++ + +++ E + I + S Q ++ I+ A + D++ SE+ H D Sbjct: 198 RIQCEFPN-IIDLSYEDAIKIFRKRSWQIQIEEIKKSCIAFRVNFDVWFSEESLHEPDRF 256 Query: 272 PIRDIIDNLAR---QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 I LAR GY+++ R+T GDD DR +L+SD Sbjct: 257 GKSQIDKALARCKQNGYLFQ----------------KNGAFFIRTTEFGDDKDRAVLRSD 300 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV----SEKKAQINVL 384 SYTY+AAD AY+ K RGF +++ ++G+DH GYVKR +A++ + + VL Sbjct: 301 TSYTYYAADCAYYLNKINRGFSDLVILVGADHHGYVKRFQAMSNIFHVDSENNRKNVQVL 360 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L ++V L + SKR G+ I L ++ VG D +RF +D D +K+ Sbjct: 361 LGQMVSLKNK----RQSKREGNVIGLSEIIQSVGVDPLRFWFCRYPIDTPIDLDEQHLKK 416 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 +S +NPV+YVQYAYAR RS+ R A ++ F FP ++ + +E L+ L + Sbjct: 417 RSNDNPVYYVQYAYARTRSLIRSA-NLLQMEKFGFFPELLVHE------TETALVSLLYD 469 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 Y V+ +A +P+++ YL LA +H + R PR + + +L RL+L Sbjct: 470 YKTVVIDAARFLQPHRVVRYLESLAGAYHKWYDKCRIIPRKGILDKSEAELVNTRLELNR 529 Query: 565 AVASIINSGLNIIGVESPNEM 585 AV ++ + L++IGV +P M Sbjct: 530 AVGQVLYNALDLIGVSAPERM 550 >gi|28493318|ref|NP_787479.1| arginyl-tRNA synthetase [Tropheryma whipplei str. Twist] gi|81437827|sp|Q83GE9|SYR_TROWT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|28476359|gb|AAO44448.1| arginyl-tRNA synthetase [Tropheryma whipplei str. Twist] Length = 552 Score = 290 bits (742), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 181/561 (32%), Positives = 291/561 (51%), Gaps = 41/561 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + + RP +G + + + L+ L + IA+ I + + V V++A GFINL Sbjct: 26 VSLTRPPKPEYGDWALSLPLKLASLLKSPAIDIAQSIASALLELDGVQDVYVAKPGFINL 85 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 LS + I+S ++ G +GRN K+N+EFVS NPTGP+H+ H R A VGD++A Sbjct: 86 KLSREHTTGIISEVLEQGSSFGRNTTQSSKKINLEFVSGNPTGPLHLAHTRWAAVGDSIA 145 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ G +VTREYYIN+ G QI+ + SV Y +AL LP+ YPG Y+K + + Sbjct: 146 RILINCGADVTREYYINNVGNQIHLFSESV---YARAL---SKSLPKDGYPGEYVKDIAR 199 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 + ++ + +++ E + I + S Q ++ I+ A + D++ SE+ H D Sbjct: 200 RIQCEFPN-IIDLSYEDAIKIFRKRSWQIQIEEIKKSCIAFRVNFDVWFSEESLHEPDRF 258 Query: 272 PIRDIIDNLAR---QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 I LAR GY+++ R+T GDD DR +L+SD Sbjct: 259 GKSQIDKALARCKQNGYLFQ----------------KNGAFFIRTTEFGDDKDRAVLRSD 302 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV----SEKKAQINVL 384 SYTY+AAD AY+ K RGF +++ ++G+DH GYVKR +A++ + + VL Sbjct: 303 TSYTYYAADCAYYLNKINRGFSDLVILVGADHHGYVKRFQAMSNIFHVDSENNRKNVQVL 362 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L ++V L + SKR G+ I L ++ VG D +RF +D D +K+ Sbjct: 363 LGQMVLLKNK----RQSKREGNVIGLSEIIQSVGVDPLRFWFCRYPIDTPIDLDEQHLKK 418 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 +S +NPV+YVQYAYAR RS+ R A ++ F FP ++ + +E L+ L + Sbjct: 419 RSNDNPVYYVQYAYARTRSLIRSA-NLLQMEKFGFFPELLVHE------TETALVSLLYD 471 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 Y V+ +A +P+++ YL LA +H + R PR + + +L RL+L Sbjct: 472 YKTVVIDAARFLQPHRVVRYLESLAGAYHKWYDKCRIIPRKGILDKSEAELVNTRLELNR 531 Query: 565 AVASIINSGLNIIGVESPNEM 585 AV ++ + L++IGV +P M Sbjct: 532 AVGQVLYNALDLIGVSAPERM 552 >gi|225620694|ref|YP_002721952.1| arginyl-tRNA synthease [Brachyspira hyodysenteriae WA1] gi|254782945|sp|C0R2B0|SYR_BRAHW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|225215514|gb|ACN84248.1| arginyl-tRNA synthease [Brachyspira hyodysenteriae WA1] Length = 534 Score = 290 bits (741), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 196/576 (34%), Positives = 296/576 (51%), Gaps = 65/576 (11%) Query: 11 LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 LK YLK+ D K I I I D G + AM L++ L +PL IA I Sbjct: 19 LKEYLKDTDVK-----DIESYIEIGYAVDDKFGDYACPVAMRLAKVLKKNPLEIANSITE 73 Query: 71 RIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129 KID D + +A GFINL LS +Y+ + ++ ++ + +YG+N + K+ +E+VS Sbjct: 74 --KIDKKYFDKIEVAKPGFINLTLSYNYINECINDLI-NNDDYGKNTVEDKKKILVEYVS 130 Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189 ANPTGP+H+GH R A +G L++++ ++G+EV +E+Y+NDAG QI L SV Sbjct: 131 ANPTGPLHIGHGRWAAIGSALSNILKYAGHEVYQEFYVNDAGEQITKLNESV------KA 184 Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249 ++PE Y G Y+K V K+ + KD +++ K+ L Sbjct: 185 VQEGREIPEDGYHGEYIKDVAKQDG-----------------VPKDIILESQKKL----L 223 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 + D + SE G + +D L ++G ++E + + Sbjct: 224 ERFGTHMDNYASELKIREG--GELEKTMDFLDKEGLLFE----------------EDNAV 265 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369 F+ST GDD DR + KS+G+YTYFA D+ Y K K +RG+ +I ++G+DH GYV R+ A Sbjct: 266 WFKSTKYGDDKDRVVKKSNGTYTYFAPDITYHKNKIDRGYHYLIDILGADHHGYVPRITA 325 Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429 AVS+ A + V+L +LVRLYR ++MSKR GD I+L V+DE+G D R+ +L R Sbjct: 326 AVRAVSKDTASLKVILGQLVRLYRGNELVRMSKRTGDMISLEDVIDEIGVDPTRYFLLMR 385 Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489 S LDFD K++ +NPV+YVQYAYAR +IF + ++ D D P ++ + Sbjct: 386 SYSSSLDFDLELAKKKDNDNPVYYVQYAYARICNIFFKLEEKNMSYD-DNKPLDISKIAN 444 Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549 E S L+L + +P I A + E Y L Y Y++AS H + V Sbjct: 445 E---SSLKLAKMILRFPDEIYEAAKSLEVYTLINYTYEIASALHRFYYDN-------IVL 494 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N ++ RL L+ AV I+ +IIG+ M Sbjct: 495 EENAEIRQERLTLIKAVKKILGLCFDIIGISKVERM 530 >gi|71066501|ref|YP_265228.1| arginyl-tRNA synthetase [Psychrobacter arcticus 273-4] gi|109895022|sp|Q4FQB4|SYR_PSYA2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|71039486|gb|AAZ19794.1| arginyl-tRNA synthetase [Psychrobacter arcticus 273-4] Length = 609 Score = 290 bits (741), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 192/604 (31%), Positives = 301/604 (49%), Gaps = 82/604 (13%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 I R +D +HG ++N A+ ++ +P +AE IV + + D+ + IAG GFIN++L Sbjct: 36 ITRTKDASHGDFASNIALTAAKAAKANPRQVAEKIVNALPENQDIRQIEIAGPGFINVFL 95 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + +L I +G + G KV +EFVSANPT +HVGH R A G ++++L Sbjct: 96 NTEAKFAVLDDIFNLQAGFGLSKQFDGQKVQVEFVSANPTSSLHVGHGRGAAFGMSVSNL 155 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + GY+VTREYY+NDAG Q++ LA S + RY + P Y G Y+ + + L Sbjct: 156 LEAIGYDVTREYYVNDAGRQMDILATSTYLRYLET-NGEPVTFPVNGYQGDYVSDIAQTL 214 Query: 214 ----ADKYSSELL----NFPEEKWLPIVKD------------------------------ 235 AD Y + PE+ I D Sbjct: 215 KTQHADTYVHRFAEIAKDVPEDAQFEINADGEKVLLSGDKEAHIDGLIANSKALLGSGYE 274 Query: 236 ----YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291 ++ +++ I+DDL + ++ + SE R S I ++ L +GY+YE Sbjct: 275 LFLNAALSSILADIKDDLNDFGVSYECWFSE----RSIDSEIEPVLQILEDKGYLYE--- 327 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351 + F+ST GD+ DR + +++G TYFA+D+AY K K++RGFD Sbjct: 328 -------------KDGNIWFKSTDFGDEKDRVVRRANGQSTYFASDIAYHKNKFDRGFDK 374 Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 ++ V G+DH GYV R++A A+ +++V+L + V L+R ++MS R+G F+TLR Sbjct: 375 VVNVWGADHHGYVPRVKAALLALGIDADRLDVVLVQFVALWRGDEKVQMSSRSGKFVTLR 434 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQAKD 470 + EVG+D+ RF + RK +DFD K QSK+N V+Y+QYA+AR CR + + Sbjct: 435 ELRHEVGNDAARFYYVARKPEVHVDFDLELAKSQSKDNLVYYIQYAHARVCRVLEKLEAS 494 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 D QE +SE +LI LA YP + + EP+ L YL +LA+ Sbjct: 495 GLSVND----AMGAEQQELLVASSEEELIKLLAAYPATLLRSATGYEPHILTNYLKELAA 550 Query: 531 VFHGHWSHGR---------ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 +FHG + R E P A+ + RL+L AV +I++GL ++G+ + Sbjct: 551 LFHGWYDSNRILPVSLTSGETP-----SADEMAMMQARLRLSKAVRLVISNGLGLLGLSA 605 Query: 582 PNEM 585 P+ M Sbjct: 606 PSSM 609 >gi|299532760|ref|ZP_07046147.1| arginyl-tRNA synthetase [Comamonas testosteroni S44] gi|298718984|gb|EFI59954.1| arginyl-tRNA synthetase [Comamonas testosteroni S44] Length = 569 Score = 290 bits (741), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 181/580 (31%), Positives = 297/580 (51%), Gaps = 61/580 (10%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGK 86 R E P+ AHG + AAM L++PL +P + E + ++ VD++ IAG Sbjct: 26 RAAFENPKVAAHGDFACTAAMQLAKPLKANPRALGEQLKTALEATAAFQQWVDAIEIAGP 85 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GF+N+ L P+ ++++ ++ ++G +G + +EFVSANPTGP+HVGH R A + Sbjct: 86 GFLNIRLKPAAKQEVVREVLAQAQKFGYQ-ADRGENILVEFVSANPTGPLHVGHGRQAAI 144 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ-----QALYNNDSDLP--EG 199 GD +++L + G++V RE+Y NDAG QI+TL S R + + DS+ P + Sbjct: 145 GDAISNLYSTQGWKVHREFYYNDAGVQIDTLTKSTQLRAKGFKPGDECWPTDSENPLAKN 204 Query: 200 YYPGVYLKHVGKELADKYS-----SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254 +Y G Y+ + K K + E + + ++ ++V + DL+A N+ Sbjct: 205 FYNGDYIADIAKAFLAKETIKADDREFTANGDVEDYDNIRQFAVAYLRNEQDKDLQAFNL 264 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 + D + E + + + ++ L G YE L RST Sbjct: 265 KFDEYYLESSLY--ENGHVEATVNRLIANGKTYE----------------QDGALWLRST 306 Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAA 372 GDD DR + K+DG YTYF D+AY K++RGF ++ + G+DH G + R+ A AA Sbjct: 307 DYGDDKDRVMRKTDGGYTYFVPDVAYHIQKFKRGFTKVVNIQGTDHHGTIARVRAGLQAA 366 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 V + + +L +VR+ R+G +K+SKRAG ++TLR +++ D+VRF +L RK Sbjct: 367 DVGIPEGYPDYVLHTMVRVVRNGEEVKISKRAGSYVTLRDLIEWTSKDAVRFFLLSRKPD 426 Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD-------IFPDLDFDLFPRNVI 485 FD Q+ +NPV+YVQYA+AR +S+ R ++ D+D Sbjct: 427 TEYTFDVDLAVAQNNDNPVYYVQYAHARIQSVLRAWQEAGGAGLAALKDVDLSALEG--- 483 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 PQ L++ LA+YP ++ A P+ + FYL DLAS +H ++ R Sbjct: 484 PQAQA-------LMLLLAKYPEMLTAAAEGNAPHDVTFYLRDLASSYHSYYDAER----- 531 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++ K+ + RL LV A A ++++GL ++GV +P M Sbjct: 532 --ILVDDEKVKLARLALVAATAQVLHNGLAVLGVSAPERM 569 >gi|264680676|ref|YP_003280586.1| arginyl-tRNA synthetase [Comamonas testosteroni CNB-2] gi|262211192|gb|ACY35290.1| arginyl-tRNA synthetase [Comamonas testosteroni CNB-2] Length = 569 Score = 289 bits (740), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 181/580 (31%), Positives = 297/580 (51%), Gaps = 61/580 (10%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGK 86 R E P+ AHG + AAM L++PL +P + E + ++ VD++ IAG Sbjct: 26 RAAFENPKVAAHGDFACTAAMQLAKPLKANPRALGEQLKTALEATAAFQQWVDAIEIAGP 85 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GF+N+ L P+ ++++ ++ ++G +G + +EFVSANPTGP+HVGH R A + Sbjct: 86 GFLNIRLKPAAKQEVVREVLAQAEKFGYQ-TDRGENILVEFVSANPTGPLHVGHGRQAAI 144 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ-----QALYNNDSDLP--EG 199 GD +++L + G++V RE+Y NDAG QI+TL S R + + DS+ P + Sbjct: 145 GDAISNLYSTQGWKVHREFYYNDAGVQIDTLTKSTQLRAKGFKPGDECWPTDSENPLAKN 204 Query: 200 YYPGVYLKHVGKELADKYS-----SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254 +Y G Y+ + K K + E + + ++ ++V + DL+A N+ Sbjct: 205 FYNGDYIADIAKAFLAKETIKADDREFTANGDVEDYDNIRQFAVAYLRNEQDKDLQAFNL 264 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 + D + E + + + ++ L G YE L RST Sbjct: 265 KFDEYYLESSLY--ENGHVEATVNRLIANGKTYE----------------QDGALWLRST 306 Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAA 372 GDD DR + K+DG YTYF D+AY K++RGF ++ + G+DH G + R+ A AA Sbjct: 307 DYGDDKDRVMRKTDGGYTYFVPDVAYHIQKFKRGFTKVVNIQGTDHHGTIARVRAGLQAA 366 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 V + + +L +VR+ R+G +K+SKRAG ++TLR +++ D+VRF +L RK Sbjct: 367 DVGIPEGYPDYVLHTMVRVVRNGEEVKISKRAGSYVTLRDLIEWTSKDAVRFFLLSRKPD 426 Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD-------IFPDLDFDLFPRNVI 485 FD Q+ +NPV+YVQYA+AR +S+ R ++ D+D Sbjct: 427 TEYTFDVDLAVAQNNDNPVYYVQYAHARIQSVLRAWQEAGGAGLAALKDVDLSALEG--- 483 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 PQ L++ LA+YP ++ A P+ + FYL DLAS +H ++ R Sbjct: 484 PQAQ-------ALMLLLAKYPEMLTAAAEGNAPHDVTFYLRDLASSYHSYYDAER----- 531 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++ K+ + RL LV A A ++++GL ++GV +P M Sbjct: 532 --ILVDDEKVKLARLALVAATAQVLHNGLAVLGVSAPERM 569 >gi|241765029|ref|ZP_04763024.1| arginyl-tRNA synthetase [Acidovorax delafieldii 2AN] gi|241365387|gb|EER60186.1| arginyl-tRNA synthetase [Acidovorax delafieldii 2AN] Length = 561 Score = 289 bits (740), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 187/576 (32%), Positives = 292/576 (50%), Gaps = 61/576 (10%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGK 86 + E P+ +HG + AAM L++PL L+P +AE + + P V + IAG Sbjct: 26 KAAFESPKVASHGDFACTAAMQLAKPLKLNPRQVAENLRTALLATPVYQRWVTEIEIAGP 85 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYG----RNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 GFIN+ L P+ ++I+ ++ +G +G RN +V +EFVSANPTGP+HVGH R Sbjct: 86 GFINIRLKPAAKQEIVREVLGAGARFGYRPRRN-----ARVLVEFVSANPTGPLHVGHGR 140 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202 A +GD ++ L G++V RE+Y NDAG QI TLA S R + D++ PE Y Sbjct: 141 QAALGDAISHLFDTQGWDVYREFYYNDAGVQIATLATSTQMR-ARGFKPGDAEWPEAAYN 199 Query: 203 GVYLKHVGKELADKYS-----SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257 G Y+ + + K + E + L ++ ++V + DLKA +++ D Sbjct: 200 GDYIADIAADFLAKKTVRSDDREFTASGDVNDLDGMRLFAVAYLRHEQDLDLKAFDVRFD 259 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 + E + + ++ L G YE L +ST G Sbjct: 260 NYYLESSLYT--SGKVDAVVQKLRDAGKTYE----------------HDGALWLKSTEYG 301 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVS 375 DD DR + K DG YTYF D+AY K+ERGF ++ + G+DH G + R+ A AA V Sbjct: 302 DDKDRVMRKGDGGYTYFVPDVAYHITKWERGFTKVVNIQGTDHHGTIARVRAGLQAAGVG 361 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435 + + +L +VR+ R G +K+SKRAG ++TLR +++ D+VRF +L RK Sbjct: 362 IPQGYPDYVLHTMVRVVRGGEEVKISKRAGSYVTLRDLIEWTSKDAVRFFLLSRKPDTEY 421 Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ-----AKDIFPDLDFDLFPRNVIPQESE 490 FD Q+ +NPV+YVQYA+AR S+ R D+ D DL S Sbjct: 422 TFDVDLAVAQNNDNPVYYVQYAHARICSVLRSWQEQGGGDVAALKDVDL---------SA 472 Query: 491 FDTSELQ-LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549 + + Q L++ LA+YP ++ A + P+ + FYL DLA+ +H ++ R + Sbjct: 473 LEGPQAQALMLQLAKYPDMLTAAAEGEAPHDVTFYLRDLAASYHSYYDAER-------IL 525 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + RL LV A A ++++GL ++GV +P M Sbjct: 526 VEDESVKLARLALVAATAQVLHNGLAVLGVSAPARM 561 >gi|184200608|ref|YP_001854815.1| arginyl-tRNA synthetase [Kocuria rhizophila DC2201] gi|238689220|sp|B2GLW8|SYR_KOCRD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|183580838|dbj|BAG29309.1| arginyl-tRNA synthetase [Kocuria rhizophila DC2201] Length = 556 Score = 289 bits (740), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 186/562 (33%), Positives = 288/562 (51%), Gaps = 51/562 (9%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +ERP++ HG +T AM +++ +G P +A+++ R+ P V +V IAG GF+N+ L Sbjct: 36 VERPKNRDHGDWATTVAMQVAKKVGRSPRDVAQILSERLARVPGVKTVDIAGPGFLNITL 95 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + + S+V G +G GT +N+EFVSANPTGP+H+G R A VGD+LA + Sbjct: 96 DAAAAGGLAQSVVEQGSAFGTGDALAGTTINLEFVSANPTGPIHLGGTRWAAVGDSLARV 155 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + G EV REYY ND G QI+ A S+ R + PE Y G Y+ V +E+ Sbjct: 156 LQAQGAEVVREYYFNDHGNQIDRFARSLLARAR------GEAAPEDGYGGQYISDVAQEV 209 Query: 214 ADKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 + L + P+E + + V+ M I+ L + D+F E+ + Sbjct: 210 LALHPDALESEDPQE----VFRAAGVELMFAQIKSSLHEFGVDFDVFFHENSLF--EDGQ 263 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + +++ L +Y RST GDD DR ++KSDG+ Sbjct: 264 VEKLLEQLRSSDSLY----------------FADGAWWLRSTEHGDDKDRVVIKSDGNAA 307 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 Y A D+AYFK K +RG D IY++G+DH GYV RL+A AAA+ + + VL+ ++V L Sbjct: 308 YIAGDIAYFKNKRDRGADLCIYMLGADHHGYVARLKAAAAALGDSPDAVEVLIGQMVNLV 367 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 RDG ++MSKRAG +T+ +V+ VG D+ R+ + +D D + +S ENPVF Sbjct: 368 RDGEAVRMSKRAGTVVTMEDLVEVVGVDAARYSLTRYSVDSNIDIDLDVLTRRSNENPVF 427 Query: 453 YVQYAYARCRSIFRQAKDI---------FPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503 YVQYA+AR ++ R A+ P D L P+E++ L+ L Sbjct: 428 YVQYAHARTCAVARNAEAAGVRRTDDAGAPQFDAALLSH---PREAD-------LLAALG 477 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 +YP V+ A +EP+++A +L LA +H + R P+ + RL L Sbjct: 478 QYPSVVAQAADFREPHRVARHLEALAGAYHRWYDACRVTPQ---GDGEVELVHHTRLWLN 534 Query: 564 HAVASIINSGLNIIGVESPNEM 585 AV ++ +GL+++GV +P M Sbjct: 535 DAVRQVLANGLDLLGVSAPERM 556 >gi|332524260|ref|ZP_08400484.1| arginyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2] gi|332107593|gb|EGJ08817.1| arginyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2] Length = 566 Score = 289 bits (739), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 193/568 (33%), Positives = 286/568 (50%), Gaps = 52/568 (9%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKGF 88 E P+ AHG L+ AAM L+R L +P + + +V + P V ++ IAG GF Sbjct: 28 AFESPKQAAHGDLAITAAMGLARTLKKNPREVGQQLVELLGRQPAFERWVQALEIAGPGF 87 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 INL L P+ + +++ ++ G +GR G G K+ +EFVSANPTGP+HVGH R A +GD Sbjct: 88 INLRLKPAARQAVVAEVLQGGEAFGRKPAGAG-KLMVEFVSANPTGPLHVGHGRQAALGD 146 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 ++ L G++VTRE+Y NDAG QI LA S R + L D PE Y G Y+ Sbjct: 147 SICRLFESQGWDVTREFYYNDAGVQIQNLATSTRCRL-KGLKPGDDGWPESAYNGDYIAD 205 Query: 209 VGKELADKYS-----SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 + + A K + + + ++ ++V + DL+A ++ D + E Sbjct: 206 IAADFAAKKTVHADDRAFTASGDADDVDGIRQFAVAYLRHEQDLDLQAFGVRFDNYYLES 265 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323 + + D + L G +E D L RST GDD DR Sbjct: 266 SLYA--DGRVEDTVRRLVAAGKTFE----------------DGGALWLRSTDYGDDKDRV 307 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQI 381 + KSDGSYTYF D+AY K+ERGF +I V GSDH G + R+ A AA V Sbjct: 308 MRKSDGSYTYFVPDVAYHIAKFERGFTKVINVQGSDHHGTIARVRAGLQAAGVGIPAGYP 367 Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441 + +L ++V + + G +K+SKRAG ++TLR ++D D+VR+ ++ RK FD Sbjct: 368 DYVLHKMVTVMKGGQEVKISKRAGSYVTLRDLIDWTSRDAVRYFLISRKADTEFVFDIDL 427 Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501 + + ENPVFYVQYA+AR S+ Q + DL R P SE L++ Sbjct: 428 ALKANDENPVFYVQYAHARICSVLAQYQGETDFAGADL-SRLTAP-------SEYALMLQ 479 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMM 558 LA YP ++E A P+ +AFYL DLA+ FH +++ R ++P L + T Sbjct: 480 LAAYPGMLERAAAEHAPHDVAFYLRDLAAAFHSYYAAERFLVDDPALARARMALLAAT-- 537 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEMS 586 A ++ + L ++GV +P MS Sbjct: 538 --------AQVLRNALGMLGVSAPTSMS 557 >gi|169334677|ref|ZP_02861870.1| hypothetical protein ANASTE_01080 [Anaerofustis stercorihominis DSM 17244] gi|169257415|gb|EDS71381.1| hypothetical protein ANASTE_01080 [Anaerofustis stercorihominis DSM 17244] Length = 557 Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 183/566 (32%), Positives = 296/566 (52%), Gaps = 38/566 (6%) Query: 22 IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80 ++++K+ + +I +E PR+ G S N AM L++ +P IAE I+ I V Sbjct: 28 LEIKKEDVPQIRVEVPREEKFGDFSVNTAMQLAKAARCNPRIIAENIIKNIDTKNSYVKD 87 Query: 81 VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140 + IAG GFIN L +L L ++ +YG+ + +VN+E+VSANPTGP+H+G+ Sbjct: 88 ISIAGAGFINFTLDNKWLYDELKKVITLKDKYGKIVEENPKRVNVEYVSANPTGPLHIGN 147 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R +GD +++++ ++G +VT+E+Y+NDAG QI S+ RY Q L D + PE Sbjct: 148 ARGGAIGDVISNILTWAGCDVTKEFYLNDAGNQIIKFGESLEARYLQEL-GKDVEFPEDG 206 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G + + K ++ +LLN EE+ + +YS+ + + +DLK I +D+F Sbjct: 207 YKGEDITDLAKSYIEENGDKLLNVSEEERQSELVEYSLDKNVSNMVNDLKDYGIDYDVFF 266 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE H + I D+I + G VY+ L F+ T G + Sbjct: 267 SERTLH--NSGAIDDVISKMKNDGSVYK----------------KEGALWFKGTEYGLEK 308 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 D L++ +G TY+AAD+AY K +R FD I V G+DH G+V RL+ A+ + Sbjct: 309 DEVLIRQNGVPTYYAADIAYHYDKLVKRNFDYAINVWGADHHGHVARLKKAMVALGVNED 368 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439 +++V+L +LV L ++ ++MSKR G+ TL +V EVG D+ RF+ + K + +DFD Sbjct: 369 RLDVILMQLVHLVKNNEALRMSKRKGNIYTLSDLVGEVGKDAARFVFNYNKPNTHMDFDL 428 Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 +QS +NPVFYVQYA+AR SI R + +L + E+ L+ Sbjct: 429 DLAIKQSSDNPVFYVQYAHARICSIIRNIGKEVKAENLELLNK----------KEEINLL 478 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 ++ + I A+ +P K+ Y DLA FH ++ R V ++ L R Sbjct: 479 KVISNFSDEILKASNDLDPSKITKYAMDLAGSFHSFYNAHR-------VIVDDEDLMNAR 531 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L LV A +++ + L+I+GV + +M Sbjct: 532 LALVTATRNVLKNTLDILGVSALEKM 557 >gi|171464254|ref|YP_001798367.1| arginyl-tRNA synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|238692828|sp|B1XSF4|SYR_POLNS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|171193792|gb|ACB44753.1| arginyl-tRNA synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 575 Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 197/585 (33%), Positives = 292/585 (49%), Gaps = 76/585 (12%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK----IDPDVDSVFIAGKGFI 89 +ERP+ HG ++ N A+ LS+ L+P +A+ +V R++ + + S IAG GF Sbjct: 34 LERPKAVDHGDVACNIALQLSKAWKLNPRELAQALVERLQQQTGFNELIASCEIAGPGFS 93 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLI--GKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 N LS + ++ I+ G +G + G T IEFVSANPTGP+HVGH R A +G Sbjct: 94 NFRLSNAAKTAVVQEILSGGTSFGESAPADGSATSAMIEFVSANPTGPLHVGHGRQAALG 153 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D LA+L+A G +V RE+Y NDAG QI LALSV R Q L D+ PE Y G Y+ Sbjct: 154 DALANLLATQGIKVHREFYYNDAGVQIANLALSVQARL-QGLKPGDAKWPEQAYNGEYIA 212 Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 + K S E F ++ + ++ ++V + DLK ++ D + E + Sbjct: 213 EIATTF--KASPE---FKDD--IEAIRQFAVAYLRNEQDIDLKTFGVKFDCYYLESSLY- 264 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 + I+ +L G YE L ++ GDD DR + KS Sbjct: 265 -TDGSVAQIVGDLQSIGKTYE----------------SEGVLWLKTIDDGDDKDRVMRKS 307 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK------KAQI 381 DGS+TYF D+AY K+ RGF +I V GSDH G + R+ + V++K K Sbjct: 308 DGSFTYFVPDVAYHTSKWNRGFQKVINVQGSDHHGTIARVRSGLQGVAQKRGWDIPKTYP 367 Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD------------------EVGSDSVR 423 + +L ++V + R G +K+SKRAG ++T+R +V+ + G D+VR Sbjct: 368 DYVLHKMVTVMRHGEEVKISKRAGSYVTVRDLVEWSGGVTPEMTSEERELALQRGRDAVR 427 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL---DFDLF 480 F ++ RK FD +Q+ ENPVFYVQYA+AR SI +Q DL D L Sbjct: 428 FFLISRKADTEFVFDIDLALQQNDENPVFYVQYAHARISSILQQWGGQTSDLASADLSLL 487 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 Q D L+ LAEYP ++ A P+ LAFYL +LA FH ++ R Sbjct: 488 ------QSKASD----HLLRCLAEYPEMLTTAAEELAPHALAFYLRNLAGDFHTFYNADR 537 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V +++ L + RL L+ A ++ +GL ++GV +P +M Sbjct: 538 -------VLVDDQNLKLARLALLSATRQVLQNGLKVLGVSAPAKM 575 >gi|296137179|ref|YP_003644421.1| arginyl-tRNA synthetase [Thiomonas intermedia K12] gi|295797301|gb|ADG32091.1| arginyl-tRNA synthetase [Thiomonas intermedia K12] Length = 595 Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 197/627 (31%), Positives = 311/627 (49%), Gaps = 92/627 (14%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 +F++RL L++ ++ E I + RPR HG L++N AM L++PL +P +A Sbjct: 14 EFTARLTTALQQAATALQPE--FSGSIELSRPRSDDHGELASNLAMQLAKPLKRNPRDVA 71 Query: 66 ELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 + I+ ++ + D + IAG GFIN +L + L++++ + ++G + G+ Sbjct: 72 QQIIDALRTNADLAEGIARTEIAGPGFINFHLHAAVLQQVIVEVEQGAAKFGHSRAGREQ 131 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 + +EFVSANPTGP+HVGH R +GD +A+++ G+ V RE+Y NDAG QI TLALSV Sbjct: 132 PMLVEFVSANPTGPLHVGHGRQGALGDAIAAVLTTQGWAVQREFYYNDAGVQIQTLALSV 191 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD------ 235 R + D+ PE Y G Y+ + + D + E + P+++ PIV + Sbjct: 192 QAR-ARGYKPGDAQWPESAYNGDYIADIAR---DFLACE--SVPDDQGQPIVANGQADDL 245 Query: 236 -----YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290 ++V + + DLK I+ D + E + + D + L G+ YE Sbjct: 246 DNIRRFAVAYLRREQDLDLKTFGIRFDNYYLESSLY--TDGRVEDAVQRLQASGHTYE-- 301 Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350 L R+T GDD DR + KSDG+YTYF D+AY K++RGF Sbjct: 302 --------------QDGALWLRTTQYGDDKDRVMRKSDGTYTYFVPDVAYHLAKWQRGFH 347 Query: 351 NMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 + + GSDH G + R+ A A + + +L ++V + R G +K+SKRAG ++ Sbjct: 348 RAVNIQGSDHHGTIARVRAGLQALDLGIPTGYPDYVLHKMVTVMRGGQEVKISKRAGSYV 407 Query: 409 TLRHVVD------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 T+R +++ + G D+VRF ++ RK FD QS ENP Sbjct: 408 TVRDLIEWSGGVRDDMSDEQRQAALQRGRDAVRFFLVSRKADTEFVFDVDLALAQSDENP 467 Query: 451 VFYVQYAYARCRSIFRQAKDIFP------------DLDFDLFPRNVIPQESEFDTSELQL 498 V+YVQYA+AR S+F Q P DL + PR E L Sbjct: 468 VYYVQYAHARVNSVFEQWAARAPQEAAQPALIEQADLSLLIAPR------------ERAL 515 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 ++ LA YP+V+ A P+++AFYL DLA+ FH ++ R V + L Sbjct: 516 LLTLARYPQVLAAAAQELAPHQVAFYLRDLAADFHAFYNAER-------VLVDELPLRHA 568 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 RL+L+ AV ++++ L ++GV +P M Sbjct: 569 RLRLLRAVRQVMHNALAVLGVSAPQRM 595 >gi|160896118|ref|YP_001561700.1| arginyl-tRNA synthetase [Delftia acidovorans SPH-1] gi|238687178|sp|A9BRF4|SYR_DELAS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|160361702|gb|ABX33315.1| arginyl-tRNA synthetase [Delftia acidovorans SPH-1] Length = 565 Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 186/575 (32%), Positives = 301/575 (52%), Gaps = 55/575 (9%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGK 86 R E P+ AHG + AAM L++PL L+P ++ E + A ++ P VD++ IAG Sbjct: 26 RAAFESPKVAAHGDFACTAAMQLAKPLKLNPRSLGEQLKAALEATPSFQRWVDAIEIAGP 85 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GF+N+ L P+ ++I+ ++ ++G L +G K+ +EFVSANPTGP+HVGH R A + Sbjct: 86 GFLNIRLKPAAKQQIIREVLEQAEKFGW-LADRGAKMLVEFVSANPTGPLHVGHGRQAAL 144 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ-----QALYNNDSDLP--EG 199 GD + +L A G+ V RE+Y NDAG QI+TL S R + + D + P + Sbjct: 145 GDAICNLYATQGWGVHREFYYNDAGVQIDTLTKSTQLRAKGFKPGDECWPIDPENPASKA 204 Query: 200 YYPGVYLKHVGKE-LADKY----SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254 +Y G Y++ + + LA K E + + ++ ++V + DL+A N+ Sbjct: 205 FYNGSYIQDIADDFLACKTVKADDREFTANGDVEDYDNIRQFAVAYLRNEQDKDLQAFNL 264 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 D + E + + D + L G+ YE +D L +ST Sbjct: 265 HFDEYYLESSLYTN--GYVEDAVQRLIAGGHTYE---------------LD-GALWLKST 306 Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAA 372 GDD DR + K DG+YTYF D+AY K++RG+ ++ + G+DH G + R+ A AA Sbjct: 307 DYGDDKDRVMRKQDGNYTYFVPDVAYHIQKFKRGYSKVVNIQGTDHHGTIARVRAGLQAA 366 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 V + +L +VR+ R G +K+SKRAG ++TLR +++ D+VRF +L RK Sbjct: 367 DVGIPAGYPDYVLHTMVRVVRGGEEVKISKRAGSYVTLRDLIEWTSKDAVRFFLLSRKPD 426 Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491 FD Q+ +NPV+YVQYA+AR C + D D DL S Sbjct: 427 TEYTFDVDLAVAQNNDNPVYYVQYAHARICSVLAAWGGDAATLKDVDL---------SAL 477 Query: 492 DTSELQ-LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550 + + Q L++ LA+YP ++ +A P+ + FYL +LAS++H ++ R + Sbjct: 478 EGPQAQALMLQLAKYPAMLTSAAEGNAPHDVTFYLRELASLYHSYYDAER-------ILV 530 Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ K+ + RL L+ A ++++GL ++GV +P M Sbjct: 531 DDEKVKLARLALISATRQVLHNGLAVLGVSAPQRM 565 >gi|124265346|ref|YP_001019350.1| arginyl-tRNA synthetase [Methylibium petroleiphilum PM1] gi|166232805|sp|A2SC26|SYR_METPP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|124258121|gb|ABM93115.1| arginyl-tRNA synthetase [Methylibium petroleiphilum PM1] Length = 561 Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 194/569 (34%), Positives = 297/569 (52%), Gaps = 51/569 (8%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV----ARIKIDPDVDSVFIAGKGF 88 E P+ AHG L+ +AM L++PL +P +A+ ++ R + V ++ IAG GF Sbjct: 28 AFESPKQAAHGDLAITSAMQLAKPLKRNPRELAQALIDALQRREAVQRWVAALEIAGPGF 87 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 INL L + ++I++ ++ SG ++GR + +EFVSANPTGP+HVGH R A +GD Sbjct: 88 INLRLKDTTKQQIVAEVLASGTDFGRQ-PATSERALVEFVSANPTGPLHVGHGRQAALGD 146 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 + L G++VTRE+Y NDAG QI TLA S R Q L D+ PE Y G Y+ Sbjct: 147 AICKLFETQGWQVTREFYYNDAGVQIGTLAASTQARL-QGLKPGDAGWPESAYNGDYIAD 205 Query: 209 VGKELADKYS-----SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 + + + + E + L ++ ++V + DL+A ++ D + E Sbjct: 206 IAADFLARKTVKADDREFTASGDPADLDGIRQFAVAYLRHEQDLDLQAFGVRFDHYFLES 265 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323 + + + L G +E D L R+T GDD DR Sbjct: 266 SLYA--TGRVEATVGKLVAAGKTFE----------------DGGALWLRTTDYGDDKDRV 307 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQI 381 + KSDGSYTYF D+AY K+ERG+ +I + GSDH G + R+ A AA V Sbjct: 308 MKKSDGSYTYFVPDVAYHVNKWERGYHKVINIQGSDHHGTIARVRAGLQAADVGIPAGYP 367 Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441 + +L ++V + R G +K+SKRAG ++TLR ++D G D+VRF ++ RK FD Sbjct: 368 DYVLHKMVTVMRGGEEVKISKRAGSYVTLRDLIDWTGKDAVRFFLISRKADTEFVFDVDL 427 Query: 442 VKEQSKENPVFYVQYAYARCRSIF-----RQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 +++ ENPV+YVQYA+AR S+ +QA D DL R V P E+ Sbjct: 428 ALKKNDENPVYYVQYAHARICSVIVQWREQQAGDPATLAQADL-ARLVAPTEAA------ 480 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 L++ LA YP ++ A + P+ +AFYL DLA FH +++ RF+ ++ L+ Sbjct: 481 -LMLKLAAYPVMLSGAAESLAPHDVAFYLRDLAGAFHSYYAAE------RFL-TDDPALS 532 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L+ A A ++ +GL ++GV +P+ M Sbjct: 533 RARLALLAATAQVLRNGLAVLGVSAPDRM 561 >gi|311113372|ref|YP_003984594.1| arginine--tRNA ligase [Rothia dentocariosa ATCC 17931] gi|310944866|gb|ADP41160.1| arginine--tRNA ligase [Rothia dentocariosa ATCC 17931] Length = 561 Score = 287 bits (735), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 179/560 (31%), Positives = 290/560 (51%), Gaps = 49/560 (8%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +ERP+ HG +TN A+ L++ +G +P +A ++ +I P V +V IAG GF+N+ L Sbjct: 43 VERPKSREHGDWATNIALQLAKKVGKNPREVAAVLADKIASIPGVSTVDIAGPGFLNITL 102 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + + ++IV +G YG + G +N+EFVSANPTGP+H+G R A VGD LA++ Sbjct: 103 DAAAAGTLAATIVEAGNTYGTSDKFAGKTINLEFVSANPTGPIHLGGTRWAAVGDALANI 162 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + G V REYY ND G QI+ S+ + PE Y G Y+ + ++ Sbjct: 163 LEAEGANVVREYYFNDHGTQIDRFVNSLLAAAK------GEPTPEDGYAGAYITDIKDQI 216 Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD-FHRGDPSP 272 + L E + ++ + M I++ L D+F E+ F G+ Sbjct: 217 LAQRPDAL---DAENPAEVFREIGTELMFAQIKESLHRFGTDFDVFFHENSVFESGEAD- 272 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 II+ + + G ++E R+T GDD DR ++KSDG++ Sbjct: 273 --RIIEQMKQDGQLFE----------------SEGAWWMRTTDYGDDKDRVVIKSDGNHA 314 Query: 333 YFAADLAYFKCKYER---GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 Y A D+AYF+ K R D IY++G+DHSGYV RL+A+A + + QI V++ +LV Sbjct: 315 YVAGDIAYFRNKMTRPENPADIAIYMLGADHSGYVGRLKAIAQILGYRTEQIEVMIGQLV 374 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 L +DG ++MSKRAG+ +TL +V+ VG D+ R+ ++ +D D + ++S +N Sbjct: 375 NLVKDGKHVRMSKRAGNVVTLEDLVEAVGVDAARYELIRYSVDSTIDIDLDLLVQKSSDN 434 Query: 450 PVFYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 PV+YVQYA+AR ++ R A D + +D L P ++E L+ L +Y Sbjct: 435 PVYYVQYAHARTAAVERNAIDAGVHLADGVDTGLLN---TPADTE-------LLAVLGQY 484 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 P + A EP++++ YL +LA+ +H + R P+ + L RL L +A Sbjct: 485 PATVRTAAEFYEPHRMSRYLENLAAAYHSWYGLSRVAPKGDEPVTD---LHRTRLLLNNA 541 Query: 566 VASIINSGLNIIGVESPNEM 585 ++ +GL ++GV +P M Sbjct: 542 TRQVLANGLGLLGVTAPERM 561 >gi|215426612|ref|ZP_03424531.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis T92] gi|289749845|ref|ZP_06509223.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis T92] gi|289690432|gb|EFD57861.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis T92] Length = 460 Score = 287 bits (735), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 175/495 (35%), Positives = 259/495 (52%), Gaps = 53/495 (10%) Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 K+++S++ +G YG +L+ G KVN+EFVSANPTGP+H+G R A VGD L L+ G Sbjct: 10 KVVTSVIDAGHSYGHSLLLAGRKVNLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGA 69 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 +V REYY ND GAQI+ A S+ + P+ Y G Y+ ++ +++ K + Sbjct: 70 DVVREYYFNDHGAQIDRFANSLIAAAK------GEPTPQDGYAGSYITNIAEQVLQK-AP 122 Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279 + L+ P+ + + V M I+ L D++ ED H G + + I Sbjct: 123 DALSLPDAELRETFRAIGVDLMFDHIKQSLHEFGTDFDVYTHEDSMHTG--GRVENAIAR 180 Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339 L G +YE K T R++ GDD DR ++KSDG Y A DLA Sbjct: 181 LRETGNIYE------KDGAT----------WLRTSAFGDDKDRVVIKSDGKPAYIAGDLA 224 Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399 Y+ K +RGFD IY++G+DH GY+ RL+A AAA + A + VL+ ++V L RDG P++ Sbjct: 225 YYLDKRQRGFDLCIYMLGADHHGYIARLKAAAAAFGDDPATVEVLIGQMVNLVRDGQPVR 284 Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459 MSKRAG +TL +V+ +G D+ R+ ++ +D D S ENPV+YVQYA+A Sbjct: 285 MSKRAGTVLTLDDLVEAIGVDAARYSLIRSSVDTAIDIDLALWSSASNENPVYYVQYAHA 344 Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH---------LAEYPRVIE 510 R ++ R A ++ +IP DT+ L+L+ H L E+PRV+E Sbjct: 345 RLSALARNAAEL-----------ALIP-----DTNHLELLNHDKEGTLLRTLGEFPRVLE 388 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A +EP+++ YL DLA +H + R P+ L RL L A +I Sbjct: 389 TAASLREPHRVCRYLEDLAGDYHRFYDSCRVLPQ---GDEQPTDLHTARLALCQATRQVI 445 Query: 571 NSGLNIIGVESPNEM 585 +GL IIGV +P M Sbjct: 446 ANGLAIIGVTAPERM 460 >gi|300741294|ref|ZP_07071315.1| arginine--tRNA ligase [Rothia dentocariosa M567] gi|300380479|gb|EFJ77041.1| arginine--tRNA ligase [Rothia dentocariosa M567] Length = 561 Score = 287 bits (735), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 179/560 (31%), Positives = 290/560 (51%), Gaps = 49/560 (8%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +ERP+ HG +TN A+ L++ +G +P +A ++ +I P V +V IAG GF+N+ L Sbjct: 43 VERPKSREHGDWATNIALQLAKKVGKNPREVAAVLADKIASIPGVSTVDIAGPGFLNITL 102 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + + ++IV +G YG + G +N+EFVSANPTGP+H+G R A VGD LA++ Sbjct: 103 DAAAAGTLAATIVEAGKTYGTSDKFAGKTINLEFVSANPTGPIHLGGTRWAAVGDALANI 162 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + G V REYY ND G QI+ S+ + PE Y G Y+ + ++ Sbjct: 163 LEAEGANVVREYYFNDHGTQIDRFVNSLLAAAK------GEPTPEDGYAGAYITDIKDQI 216 Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD-FHRGDPSP 272 + L E + ++ + M I++ L D+F E+ F G+ Sbjct: 217 LAQRPDAL---DAENSAEVFREIGTELMFAQIKESLHRFGTDFDVFFHENSVFESGEAD- 272 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 II+ + + G ++E R+T GDD DR ++KSDG++ Sbjct: 273 --RIIEQMKQDGQLFE----------------SEGAWWMRTTDYGDDKDRVVIKSDGNHA 314 Query: 333 YFAADLAYFKCKYER---GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 Y A D+AYF+ K R D IY++G+DHSGYV RL+A+A + + QI V++ +LV Sbjct: 315 YVAGDIAYFRNKMTRPENPADIAIYMLGADHSGYVGRLKAIAQILGYRTEQIEVMIGQLV 374 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 L +DG ++MSKRAG+ +TL +V+ VG D+ R+ ++ +D D + ++S +N Sbjct: 375 NLVKDGKHVRMSKRAGNVVTLEDLVEAVGVDAARYELIRYSVDSTIDIDLDLLVQKSSDN 434 Query: 450 PVFYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 PV+YVQYA+AR ++ R A D + +D L P ++E L+ L +Y Sbjct: 435 PVYYVQYAHARTAAVERNAIDAGVHLADGVDTGLLN---TPADTE-------LLAVLGQY 484 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 P + A EP++++ YL +LA+ +H + R P+ + L RL L +A Sbjct: 485 PATVRTAAEFYEPHRVSRYLENLAAAYHSWYGLSRVAPKGDEPVTD---LHRTRLLLNNA 541 Query: 566 VASIINSGLNIIGVESPNEM 585 ++ +GL ++GV +P M Sbjct: 542 TRQVLANGLGLLGVTAPERM 561 >gi|213964728|ref|ZP_03392928.1| arginyl-tRNA synthetase [Corynebacterium amycolatum SK46] gi|213952921|gb|EEB64303.1| arginyl-tRNA synthetase [Corynebacterium amycolatum SK46] Length = 550 Score = 287 bits (734), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 182/556 (32%), Positives = 284/556 (51%), Gaps = 41/556 (7%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +ERPR+ HG +TN AM L + +G+ P +A I + +D IAG GFIN+ Sbjct: 33 TVERPRNPEHGDYATNIAMQLGKRVGMVPRDLATEIATALGASEGIDEAIIAGPGFINIR 92 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L+ KI+ ++ +G ++G VN+EFVSANPTGP+H+G R A VGD L Sbjct: 93 LASDAQGKIVEEVLAAGEKWGHADFNSNLDVNLEFVSANPTGPIHLGGTRWAAVGDALGR 152 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 +++ +G +VTREYY ND G QI+ + S+ A N + PE Y G Y++ + Sbjct: 153 VLSATGAKVTREYYFNDHGRQIDRFSDSLV----AAARNQPT--PEDGYGGEYIQDIAAA 206 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 + +K + + L EE+ + V M + I++ L D++ E+ + Sbjct: 207 VLEK-NPQALEGSEEEVQEHFRAIGVDMMFEHIKESLHEFGTDFDVYFHENSLF--ESGQ 263 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + +++L G +YE +ST GDD DR ++KSDG Sbjct: 264 VEAAVNSLKENGKLYEA----------------DGAWWLKSTDYGDDKDRVVIKSDGDAA 307 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 Y A D+AY K K++RG + IY++G+DH GY+ RL A AAA+ + VL+ ++V L Sbjct: 308 YIAGDIAYVKNKFDRGHNLCIYMLGADHHGYIARLRAAAAALGYNADGVEVLIGQMVNLL 367 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 RDG ++MSKRAG +TL +V+ +G D+ R+ ++ LD D QS +NPV+ Sbjct: 368 RDGKAVRMSKRAGTVVTLDDLVESIGVDAARYSLIRSSVDSSLDIDLGLWASQSSDNPVY 427 Query: 453 YVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 YVQY +AR SI R+A++ DF L + E +LI + E+P +I Sbjct: 428 YVQYGHARLCSIGRRAEETGVTSEGADFSLL----------VEDHEGELIRTIGEFPAII 477 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 ++A +EP+++A Y LA VFH + + P+ +L RL L A Sbjct: 478 KSAADLREPHRIARYAEQLAGVFHRFYDTCQILPK---ADEEVSELHRARLGLAEATRQT 534 Query: 570 INSGLNIIGVESPNEM 585 + + L ++GV +P M Sbjct: 535 LANALQLLGVTAPERM 550 >gi|311103352|ref|YP_003976205.1| arginyl-tRNA synthetase [Achromobacter xylosoxidans A8] gi|310758041|gb|ADP13490.1| arginyl-tRNA synthetase [Achromobacter xylosoxidans A8] Length = 560 Score = 287 bits (734), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 189/567 (33%), Positives = 297/567 (52%), Gaps = 47/567 (8%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87 +++ERP+ AHG ++TN AM L++P +P +A+ IV + P ++S IAG G Sbjct: 28 VLLERPKVAAHGDVATNVAMQLAKPARRNPRELAQAIVDALMAQPGAAGLIESAEIAGPG 87 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FINL ++ + + +++++ G +GR+ G K+ +EFVSANPTGP+HVGH R A +G Sbjct: 88 FINLRITAAARQAVIAAVAEQGAAFGRS-PRSGEKILVEFVSANPTGPLHVGHARQAALG 146 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D L L G++VTRE+Y NDAG QI+ LA+SV R + L D P Y G Y+ Sbjct: 147 DALCRLYDAIGWDVTREFYYNDAGNQIHNLAISVQAR-ARGLTTESPDWPVDGYKGDYIA 205 Query: 208 HVGKELADKYS--SELLNFPEEKWLPIVKDYSVQAMMKIIRD---DLKALNIQHDIFISE 262 + ++ + S+ ++ + + D V A+ + R+ DL+A + D + E Sbjct: 206 DIARDFQAGATVHSDGVDVIATGDVDNLDDIRVFAVAYLRREQDLDLQAFGLAFDNYYLE 265 Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV--GDDV 320 + + + L G+ YE + L R+T + GDD Sbjct: 266 SSLY--TSGRVEATVKALVAGGHTYE----------------EGGALWLRTTELGTGDDK 307 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK--K 378 DR + KS+G YTYF D+AY K K+ERGF + + GSDH G V R+ A A+ E K Sbjct: 308 DRVMRKSEGGYTYFVPDVAYHKAKWERGFHRAVNIQGSDHHGTVARVRAGLQALEEGIPK 367 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438 +L ++V++ R G +K+SKRAG ++T+R ++D VG D+VR+ ++ R+ FD Sbjct: 368 DYPAYVLHKMVKVMRGGEEVKISKRAGSYVTMRDLIDWVGRDAVRYFLIQRRADTEFVFD 427 Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498 +S ENPV+Y+QYA+AR S+ A P D ++ +EF L Sbjct: 428 VDLALSKSDENPVYYIQYAHARICSVINNAA--MPAADVAQADAALLTAPTEF-----AL 480 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 + LAE+P V+ A P+ +AF+L D AS FH + R V ++ L + Sbjct: 481 MQRLAEFPNVVALAAQELSPHHIAFWLRDCASDFHAWYGAER-------VLIDDTALKLA 533 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 RL+L ++ +GL ++GV +P M Sbjct: 534 RLRLASTTRQVLANGLELMGVSAPERM 560 >gi|194335027|ref|YP_002016887.1| arginyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271] gi|229470732|sp|B4S6D8|SYR_PROA2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|194312845|gb|ACF47240.1| arginyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271] Length = 551 Score = 287 bits (734), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 188/561 (33%), Positives = 295/561 (52%), Gaps = 40/561 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90 I IE+P + G STN A+ L++ +P +AE I A+++ P+ VD IAG GFIN Sbjct: 24 ITIEKPSNKQFGDFSTNIALTLAKECRKNPRQLAEEISAKLEFRPETVDKTTIAGPGFIN 83 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL+P+++ + + ++ G ++G+ GKG K +E+VSANPTGP+ +G R V+GD + Sbjct: 84 FYLTPAFIMQSVEQVLNEGDQFGKTCTGKGQKAIVEYVSANPTGPLTIGRGRGGVLGDCI 143 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+L+ GY+VTREYY NDAG Q+ LA SV RY + P+ +Y G Y+ + Sbjct: 144 ANLLESQGYKVTREYYFNDAGRQMTILAESVRLRYLECC-GEAIAFPDTHYQGDYISDIA 202 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH---R 267 +L +K+ EL E L K + + I++ L LNI HD F +E + + Sbjct: 203 AKLFEKHGVEL---KEVSQLDEFKQIAETYIFASIKNTLHRLNIHHDSFFNEHKLYQTGQ 259 Query: 268 GDPSPIRDIIDNLARQGYV--YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 SP +ID L + GY+ Y+G + F +T +G + D+ L+ Sbjct: 260 NGKSPNEQVIDALDKAGYISNYDG------------------AVWFTTTKLGQEKDKVLI 301 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVL 384 KS G +Y D+AY KYER F +I V G+DH Y +EA+ + +I V Sbjct: 302 KSTGEPSYRLPDIAYHVTKYERAFSEIINVFGADHIDEYPDVIEAL-RILGYDPGRIKVA 360 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 + + V +G +KMS R G+ L ++D+VG+D+ R + R L+FD K+ Sbjct: 361 INQFVTTTVNGETVKMSTRKGNADLLDDLIDDVGADATRLFFIMRSKDSHLNFDVELAKK 420 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 QS++NPVFY+QYA+AR S+ + A+ ++ F V ++ ELQL + L + Sbjct: 421 QSRDNPVFYLQYAHARICSLVKLAEQ---EIGFTQSDIGVHLMQNLDSPHELQLGLALLD 477 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 +P VI +A EP K+ YL+ +A ++H + +E P L+ + RL L Sbjct: 478 FPEVISSAVRMLEPQKMVEYLHHVAELYHRFY---QECPILK----AEPDICKARLFLSL 530 Query: 565 AVASIINSGLNIIGVESPNEM 585 A ++ +G I+GV +P M Sbjct: 531 ATRQVLQNGFRILGVTAPTAM 551 >gi|160903090|ref|YP_001568671.1| arginyl-tRNA synthetase [Petrotoga mobilis SJ95] gi|160360734|gb|ABX32348.1| arginyl-tRNA synthetase [Petrotoga mobilis SJ95] Length = 549 Score = 286 bits (733), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 188/558 (33%), Positives = 298/558 (53%), Gaps = 41/558 (7%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA----GKGF 88 IE P G S+N A +L++ L P IA+++ + V S F GF Sbjct: 28 TIETPPKDDMGDFSSNVAFLLTKRLRKSPQEIAQILKEEL-----VKSSFFEKVDNANGF 82 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 +N ++SP ++I S I+ + YG+ IGKG + EF S NPTGP+ V H R AV+GD Sbjct: 83 LNFFVSPQIYQRICSKILSNPKTYGKFDIGKGANIQFEFASINPTGPITVAHGRQAVMGD 142 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 LA++ +GY V RE Y+NDAG QI L+ S++ RY + L + ++PE Y G YL Sbjct: 143 VLANIYEQAGYVVQREMYLNDAGRQIKLLSYSLWVRYNEIL-GSKYEIPEDGYRGEYLVD 201 Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 K++ +KY + + +E+ I + ++ M+K + + L+ +N+ D+ SE + Sbjct: 202 TAKKVLNKYGEKFKDKWDEETEDIFRKEVLEDMLKNMLETLEKINVNFDVIFSEQLLFKN 261 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 + +++L +GYVYE K D L F+ + + D+ D+ L++S Sbjct: 262 --KMVEKTLNDLKSKGYVYE------------KDD----ALWFKVSDLIDENDKVLIRSK 303 Query: 329 GSY-TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387 S TYF D+AY KY RGFD +I +MGSDH G++ R+ A A A+ + + ++L + Sbjct: 304 DSMPTYFCDDIAYHYYKYLRGFDTVIDIMGSDHHGHIPRMMASAKALGLPENFLKIILHQ 363 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 V + + IKMS R+G+F TL ++ VG D+VR+ L+FD ++S Sbjct: 364 FVNVKKGEEIIKMSTRSGEFFTLDDLIQNVGKDAVRYFFAMVDPDTTLNFDIDLAIKKSN 423 Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 ENPV+YVQYA+AR SIF++A+ ++++LF + E+ + E L+ L+ + Sbjct: 424 ENPVYYVQYAHARICSIFKEAQK--RGINYELF----LGLENLKEDEEKLLMRELSLFTN 477 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 V+ A I +P L YL +AS FH +++ L + A N +L RL L HA Sbjct: 478 VLTKAVIQNKPNLLTQYLERVASRFHHFYNN------LSVLNAENYELIQGRLNLCHATK 531 Query: 568 SIINSGLNIIGVESPNEM 585 +I GL+I+GV +P M Sbjct: 532 IVIARGLSILGVNAPESM 549 >gi|170691609|ref|ZP_02882774.1| arginyl-tRNA synthetase [Burkholderia graminis C4D1M] gi|170143814|gb|EDT11977.1| arginyl-tRNA synthetase [Burkholderia graminis C4D1M] Length = 596 Score = 286 bits (732), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 191/587 (32%), Positives = 301/587 (51%), Gaps = 60/587 (10%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87 I +ERP+ AHG ++ N AM L++PL +P +A+ IV + P ++S +AG G Sbjct: 37 IALERPKVAAHGDVACNVAMQLAKPLRANPRQLAQQIVDTLLAQPQAQGLIESAEVAGPG 96 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FINL L+ + + ++ +++ YGR+ G V IEFVSANPTGP+HVGH R A +G Sbjct: 97 FINLRLAAAAKQAVVKAVLAEKDVYGRSQRDAGKHVLIEFVSANPTGPLHVGHGRQAALG 156 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D L++++A G++V RE+Y NDAG QI TLALS R + L D+ P Y G Y+ Sbjct: 157 DALSNVLASQGWDVHREFYYNDAGVQIGTLALSTQAR-ARGLAPGDAGWPASAYNGEYIA 215 Query: 208 HVGKELADKYS------SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 + K+ + + + + + L ++ ++V + + DL+A ++ D + Sbjct: 216 DIAKDYLNGVTVSASDGEPVTGARDVENLDAIRRFAVAYLRREQDMDLQAFGVKFDQYYL 275 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E + + + L G YE L R+T GDD D Sbjct: 276 ESSLY--TEGRVEKTVQALITAGKTYE----------------REGALWLRTTDDGDDKD 317 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKA 379 R + K+DG+YTYF D+AY K+ERGF +I + GSDH G + R+ A + K Sbjct: 318 RVMRKTDGTYTYFVPDVAYHVAKWERGFTKVINIQGSDHHGTIARVRAGLQGLGIGIPKG 377 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV--------------VDEV-------G 418 + +L ++V + R+G +K+SKRAG ++T+R + VD++ G Sbjct: 378 YPDYVLHKMVTVMRNGEEVKISKRAGSYVTVRDLIEWSGGALPGTEAAVDQIDEETIRRG 437 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+VRF ++ RK FD +Q+ ENPV YVQYA+AR S+ + K + + Sbjct: 438 RDAVRFFLISRKADTEFVFDIDLALKQNDENPVHYVQYAHARICSVIAECKTRYGADEST 497 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L ++ P SE + L+ LAE+P ++++A P+ +AFYL DLA FH + Sbjct: 498 LDSVDLAPLSSE---RSMALLNKLAEFPDMLQHAADELAPHAVAFYLRDLAGEFHSFY-- 552 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N R V ++ R+ L+ A ++ +GL IIGV +P +M Sbjct: 553 ---NDRAERVLVDDAAERNARVALLAATRQVLANGLAIIGVSAPVKM 596 >gi|83748526|ref|ZP_00945547.1| Arginyl-tRNA synthetase [Ralstonia solanacearum UW551] gi|207742125|ref|YP_002258517.1| arginyl-trna synthetase (arginine--trna ligase) (argrs) protein [Ralstonia solanacearum IPO1609] gi|83724830|gb|EAP71987.1| Arginyl-tRNA synthetase [Ralstonia solanacearum UW551] gi|206593513|emb|CAQ60440.1| arginyl-trna synthetase (arginine--trna ligase) (argrs) protein [Ralstonia solanacearum IPO1609] Length = 598 Score = 286 bits (732), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 201/599 (33%), Positives = 300/599 (50%), Gaps = 75/599 (12%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87 IV+ERP+ AHG ++ N A+ L++PLG +P +A I I+ D V +V IAG G Sbjct: 30 IVLERPKQAAHGDIACNVALQLAKPLGTNPRELANRIADGIRADARGQRLVSAVEIAGPG 89 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FINL LSP+ +L+++ G YG + G V +EFVSANPTGP+HVGH R A +G Sbjct: 90 FINLRLSPTARADVLAAVFAEGDRYGAADLHDGAPVLVEFVSANPTGPLHVGHGRQAALG 149 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D LA+L+ + G++V RE+Y NDAG QI+ LA+SV R + L ++ PE Y G Y+ Sbjct: 150 DALAALLEWQGHKVHREFYYNDAGVQIHNLAVSVQAR-ARGLKPGEAGWPEAAYNGDYIA 208 Query: 208 HV------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 + GK + + + + L ++ ++V + DL+A ++ D + Sbjct: 209 DIAADYLAGKTVRASDGEPVTGARDVENLEAIRRFAVTYLRNEQDIDLQAFGVKFDHYYL 268 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E + +R +D L G YE L R+T GDD D Sbjct: 269 ESSLYA--DGKVRQTVDALIAAGKTYE----------------QDGALWLRTTDDGDDKD 310 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKA 379 R + KSDGSYTYF D+AY K+ RGF +I V GSDH G + R+ A + K Sbjct: 311 RVMRKSDGSYTYFVPDVAYHTTKWGRGFTQVINVQGSDHHGTIARVRAGLQGLDIGIPKG 370 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV-----------VDEV----------- 417 + +L ++V + +DG +K+SKRAG ++T+R + VD + Sbjct: 371 YPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIEWSNGDAEAGVDTIRACVESGAPSW 430 Query: 418 ------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF-----R 466 G D+VRF +L RK FD +QS ENPV+YVQYA+AR S+F R Sbjct: 431 PERFTRGRDAVRFFLLSRKADTEFVFDVDLALKQSDENPVYYVQYAHARICSVFEQWHAR 490 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 + D+ DL + + L+ LA +P ++ +A P+ +AFYL Sbjct: 491 EGGDVASLAGADL----AAVAGPDASPQAVALVQRLAAFPDMLADAARELAPHAVAFYLR 546 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 DLA FH ++ R V ++ + RL L+ A ++ +GL +IGV +P +M Sbjct: 547 DLAGDFHAFYNADR-------VLVDDDAVKRARLALLAATRQVLRNGLAVIGVSAPQKM 598 >gi|154488020|ref|ZP_02029137.1| hypothetical protein BIFADO_01588 [Bifidobacterium adolescentis L2-32] gi|154083493|gb|EDN82538.1| hypothetical protein BIFADO_01588 [Bifidobacterium adolescentis L2-32] Length = 612 Score = 286 bits (732), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 186/595 (31%), Positives = 313/595 (52%), Gaps = 74/595 (12%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 + + RP+D AHG ++NAAM L++ G+ P AEL A + + SV +AG GFIN Sbjct: 52 KFAVMRPKDRAHGDWASNAAMQLAKKAGMKPRDFAELFAAELTNADGIKSVEVAGPGFIN 111 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + L + ++ +++ +G +YG+N G +N+EFVSANPTGP+H+G R A VGD++ Sbjct: 112 ITLDSASAAAVVDAVLEAGSDYGKNDHLSGKTLNLEFVSANPTGPIHIGGTRWAAVGDSM 171 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A ++ +G +V REYY ND G QIN A S+ A + ++ P Y G Y+ + Sbjct: 172 ARVLEANGAKVVREYYFNDHGEQINRFAKSLV----AAAHGEET--PIDGYKGAYIDEIA 225 Query: 211 KELADKYSS---ELLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDLKA 251 K + D+ ++ ++L+ P ++ P+ + S Q M I+ +K Sbjct: 226 KRVIDEANADGVDVLSLPRVDGGADQDGNPLGEGDSEQREEFRKRAVPMMFDEIQRSMKN 285 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 + D++ E+ + + I +L +G +YE K T F Sbjct: 286 FRVNFDVWFHENSLYS--DGEVDQAIADLRARGDIYE------KDGAT----------WF 327 Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLE 368 ST GDD DR ++KSDG+Y YFAAD+AY++ K R D IY++G+DH GY+ R+ Sbjct: 328 ESTKHGDDKDRVIIKSDGNYAYFAADIAYYRNKRHRETNPADVAIYMLGADHHGYIGRMM 387 Query: 369 AVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 A+ A +K + + +L+ +LV + +DG ++MSKRAG+ +T+ + D +G D+ R+ + Sbjct: 388 AMCEAFGDKPGENMQILIGQLVNVMKDGKAVRMSKRAGNVVTIDDLTDAIGVDASRYSLA 447 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNV 484 + +D D + S ENPV+YVQYA+AR ++ R A + D L Sbjct: 448 RTDYNSPVDIDLNLLSSHSNENPVYYVQYAHARSCNVDRNAAAAGITYEGADVSLLDT-- 505 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR---- 540 T++ +++ LA++P ++ A + P+++A YL DLA+ +H ++ R Sbjct: 506 --------TADGEVLAALAQWPALLREAGDLRAPHRVAHYLEDLAATYHKWYNVERVVPM 557 Query: 541 --ENPRLRFVQANNRKL--------TMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +P R QA+ ++ RL+L AV ++I GL+++GV +P++M Sbjct: 558 ELTDPEARGEQADAIRIAKAPEPARAAARLKLNDAVKTVIAEGLDLLGVTAPDKM 612 >gi|207727725|ref|YP_002256119.1| arginyl-trna synthetase (arginine--trna ligase) (argrs) protein [Ralstonia solanacearum MolK2] gi|206590966|emb|CAQ56578.1| arginyl-trna synthetase (arginine--trna ligase) (argrs) protein [Ralstonia solanacearum MolK2] Length = 600 Score = 286 bits (731), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 201/601 (33%), Positives = 300/601 (49%), Gaps = 77/601 (12%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87 IV+ERP+ AHG ++ N A+ L++PLG +P +A I I+ D V +V IAG G Sbjct: 30 IVLERPKQAAHGDIACNVALQLAKPLGTNPRELANRIADGIRADARGQRLVSAVEIAGPG 89 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FINL LSP+ +L+++ G YG + G V +EFVSANPTGP+HVGH R A +G Sbjct: 90 FINLRLSPTARADVLAAVFAEGDRYGAADLHDGAPVLVEFVSANPTGPLHVGHGRQAALG 149 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D LA+L+ + G++V RE+Y NDAG QI+ LA+SV R + L ++ PE Y G Y+ Sbjct: 150 DALAALLEWQGHKVHREFYYNDAGVQIHNLAVSVQAR-ARGLKPGEAGWPEAAYNGDYIA 208 Query: 208 HV------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 + GK + + + + L ++ ++V + DL+A ++ D + Sbjct: 209 DIAADYLAGKTVRASDGEPVTGARDVENLEAIRRFAVTYLRNEQDIDLQAFGVKFDHYYL 268 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E + +R +D L G YE L R+T GDD D Sbjct: 269 ESSLYA--DGKVRQTVDALIAAGKTYE----------------QDGALWLRTTDDGDDKD 310 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKA 379 R + KSDGSYTYF D+AY K+ RGF +I V GSDH G + R+ A + K Sbjct: 311 RVMRKSDGSYTYFVPDVAYHTTKWGRGFTQVINVQGSDHHGTIARVRAGLQGLDIGIPKG 370 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV-------------VDEV--------- 417 + +L ++V + +DG +K+SKRAG ++T+R + VD + Sbjct: 371 YPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIEWSNGDAEAEAGVDTIRACVESGAP 430 Query: 418 --------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF---- 465 G D+VRF +L RK FD +QS ENPV+YVQYA+AR S+F Sbjct: 431 SWPERFTRGRDAVRFFLLSRKADTEFVFDVDLALKQSDENPVYYVQYAHARICSVFEQWH 490 Query: 466 -RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R+ D+ DL + + L+ LA +P ++ +A P+ +AFY Sbjct: 491 AREGGDVASLAGADL----TAVAGPDASPQAVALVQRLAAFPDMLADAARELAPHAVAFY 546 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 L DLA FH ++ R V ++ + RL L+ A ++ +GL +IGV +P + Sbjct: 547 LRDLAGDFHAFYNADR-------VLVDDDAVKRARLALLAATRQVLRNGLAVIGVSAPQK 599 Query: 585 M 585 M Sbjct: 600 M 600 >gi|78777988|ref|YP_394303.1| arginyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251] gi|109895052|sp|Q30PL3|SYR_SULDN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|78498528|gb|ABB45068.1| arginyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251] Length = 527 Score = 286 bits (731), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 185/557 (33%), Positives = 302/557 (54%), Gaps = 46/557 (8%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 +++E+PRD + GH +T A L++ L P+ IA+ I + + D ++ S + KG++N Sbjct: 12 EVILEKPRDRSFGHFATPIAFALAKELKQSPMKIADEIASSFE-DNNIFSRVESVKGYLN 70 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 LS ++L + S + + + + K K+ +EFVSANPTGP+H+GH R AV GDTL Sbjct: 71 FRLSENFLSEYGSWALENPQTFAKQ--EKKEKILLEFVSANPTGPLHIGHARGAVYGDTL 128 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 L GY++T EYY+NDAG QI+ L LS+ ++ + + PE YY G YL + Sbjct: 129 FRLARHLGYDITAEYYVNDAGNQIDLLGLSIQLYGRENILHESVKYPESYYRGEYLAPLA 188 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 E K+ E+L+ +E + ++ +M+II+ DL NI D F+ E Sbjct: 189 HEAIKKFGLEILS--DESRQKELALWAKDGVMEIIKKDLANTNIFFDTFVYE-------- 238 Query: 271 SPIRDIIDN-LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 S + D D +A+ G +GI +K D +L S++ GDD DR +++ D Sbjct: 239 STLYDDWDRVMAKMG---DGIY--------KKDD----KLFIASSLKGDDDDRVVVREDA 283 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 TY A D+ Y K+ERG+D+ I + G+DH GY+ R++A + A++ VLL ++V Sbjct: 284 RPTYLAGDIVYHNQKFERGYDHYINIWGADHHGYIARVKASVEFLGYDSAKLEVLLSQMV 343 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 L +DG P KMSKRAG+ I + +V+E+GSD++RF+ +K+ L+FD + K+Q N Sbjct: 344 SLLKDGEPYKMSKRAGNVILMSDIVEEIGSDALRFIFASKKSDTALEFDLAEFKKQDSSN 403 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 P+FY+QYA+AR ++I ++ DL D + D S L+ P ++ Sbjct: 404 PIFYIQYAHARIKTIIAKS-----DLSHDEIMSATLKN---LDESADMLMFDALLLPEIV 455 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 E+A I+++ KL YL LA+ H + R A+ KL + + + + Sbjct: 456 EDAFISRQVQKLPEYLKSLAASLHKFYYDCR-----IIGTADEAKLLKLLMLVGLS---- 506 Query: 570 INSGLNIIGVESPNEMS 586 + +GL ++G+E+ + MS Sbjct: 507 LKTGLALMGIEAKDYMS 523 >gi|296160343|ref|ZP_06843160.1| arginyl-tRNA synthetase [Burkholderia sp. Ch1-1] gi|295889324|gb|EFG69125.1| arginyl-tRNA synthetase [Burkholderia sp. Ch1-1] Length = 596 Score = 286 bits (731), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 190/587 (32%), Positives = 299/587 (50%), Gaps = 60/587 (10%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87 I +ERP+ AHG ++ N AM L++PL +P +A+ IV + P V++ +AG G Sbjct: 37 ITLERPKVAAHGDVACNVAMQLAKPLRANPRQLAQQIVDALLAQPGARDLVEAAEVAGPG 96 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FINL L+ + + +++++ +GR+ G V IEFVSANPTGP+HVGH R A +G Sbjct: 97 FINLRLTAAAKQAVIAAVFAEKERFGRSQRDAGKHVLIEFVSANPTGPLHVGHGRQAALG 156 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D L++++A G++V RE+Y NDAG QI TLALS R + L D P Y G Y+ Sbjct: 157 DALSNVLASQGWDVHREFYYNDAGVQIQTLALSTQAR-ARGLAPGDEGWPASAYNGEYIA 215 Query: 208 HVGKE------LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 + K+ +A + + + L ++ ++V + + DL+A ++ D + Sbjct: 216 DIAKDYLNGVTVAASDGEPVTGARDVEDLEAIRRFAVAYLRREQDMDLQAFGVKFDQYYL 275 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E ++ + + L G YE L R+T GDD D Sbjct: 276 ESSLYK--EGRVEKTVAALIAAGKTYE----------------QEGALWLRTTDDGDDKD 317 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKA 379 R + K+DG+YTYF D+AY K+ERGF +I + GSDH G + R+ A + K Sbjct: 318 RVMRKTDGTYTYFVPDVAYHVAKWERGFTKVINIQGSDHHGTIARVRAGLQGLGIGIPKG 377 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD---------EV------------G 418 + +L ++V + R+G +K+SKRAG ++T+R +++ EV G Sbjct: 378 YPDYILHKMVTVMRNGEEVKISKRAGSYVTVRDLIEWSGGATPGSEVDVDLIDEETIRRG 437 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+VRF + RK FD +Q+ ENPV YVQYA+AR S+ + K + + Sbjct: 438 RDAVRFFLTSRKADTEFVFDIDLALKQNDENPVHYVQYAHARICSVIAECKARYNTDEST 497 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L +V P SE + L+ LAE+P ++++A P+ +AFYL DLA FH + Sbjct: 498 LADVDVTPLTSE---RAMALLNKLAEFPDMLQHAADELAPHAVAFYLRDLAGEFHSFY-- 552 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N + V ++ R+ L+ A ++ +GL IGV +P +M Sbjct: 553 ---NDKAERVLVDDAAERNARVALLAATRQVLANGLATIGVSAPVKM 596 >gi|154501138|ref|ZP_02039176.1| hypothetical protein BACCAP_04827 [Bacteroides capillosus ATCC 29799] gi|150269830|gb|EDM97365.1| hypothetical protein BACCAP_04827 [Bacteroides capillosus ATCC 29799] Length = 582 Score = 286 bits (731), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 185/573 (32%), Positives = 306/573 (53%), Gaps = 44/573 (7%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFI 89 + IE P+D +HG +++ AM ++ L + P IA++I+ ++++ S IAG GF+ Sbjct: 36 KATIEIPKDVSHGDYASSFAMAGAKALHMAPRAIAQIILDHLELEGTYFQSAEIAGPGFL 95 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N L + ++++ I G+ YG G G KV +EFVSANPTGPMH+G+ R V+GD+ Sbjct: 96 NFRLGSRWYGEVIADIEREGMTYGAVDEGHGEKVMVEFVSANPTGPMHIGNARGGVLGDS 155 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKH 208 LAS++ +GY+V RE+Y+NDAG QI+ ALS+ RY+Q + ++ PE Y G +K Sbjct: 156 LASVLERAGYDVWREFYVNDAGNQIHKFALSIDTRYRQLILGEENVPFPEDCYQGDDIKE 215 Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 + ++ ++ EE+ + ++ ++ + +++DL+ I+++ + E H Sbjct: 216 LAAAFRAEHGDSWVDKSEEERQEAMANFGLKRNIPKMQEDLRRYKIEYNEWFLESTLH-- 273 Query: 269 DPSPIRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 + + + + L+ +G+ YE G L TT+ K+ R + VD+ LK Sbjct: 274 NSGYVAETVGMLSDKGWTYEKDGALWL---NTTELL----KEKYMREGKTREQVDKLDLK 326 Query: 327 SD------GSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKK 378 D G YTYFAAD+AY + K E RGF I + G+DH G+V RL+A + + Sbjct: 327 DDVLRRANGFYTYFAADIAYHRNKLEKRGFQTAINIWGADHHGHVARLQAALDGLGLDGS 386 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438 ++ V+L +LV L +DG P++MSKR+G I LR ++DEV D+ R+ R + LDFD Sbjct: 387 HRLVVVLMQLVNLLQDGKPVRMSKRSGKAIALRDLLDEVSVDACRYFFNSRSFTSPLDFD 446 Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS---- 494 ++ +NPV+YVQYA+AR S+ + K+ + S D S Sbjct: 447 LDLAVKEDSDNPVYYVQYAHARICSLVARMKE----------EEASVSAASAIDASVFST 496 Query: 495 --ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552 EL L+ L+ +P I A+ +P + YL LA FH ++ R ++ Sbjct: 497 PEELALVKTLSLFPEEIRLASRDYDPSHINRYLLTLAGDFHRFYNACR-------IKGEE 549 Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL+L V S++ +G+ +IGV +P +M Sbjct: 550 EHVLAARLKLADTVRSVLANGMALIGVTAPEKM 582 >gi|171742108|ref|ZP_02917915.1| hypothetical protein BIFDEN_01214 [Bifidobacterium dentium ATCC 27678] gi|283456769|ref|YP_003361333.1| arginyl-tRNA synthetase [Bifidobacterium dentium Bd1] gi|171277722|gb|EDT45383.1| hypothetical protein BIFDEN_01214 [Bifidobacterium dentium ATCC 27678] gi|283103403|gb|ADB10509.1| arginyl-tRNA synthetase [Bifidobacterium dentium Bd1] Length = 596 Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 187/596 (31%), Positives = 312/596 (52%), Gaps = 72/596 (12%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 + ++ + RP+D AHG ++NAAM L++ G+ P +AEL A + + SV +AG GF Sbjct: 34 VSKLTVMRPKDRAHGDWASNAAMQLAKKAGMKPHDLAELFAAELAQSDGIKSVEVAGPGF 93 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 IN+ L + ++ +++ +G YG+N G +N+EFVSANPTGP+H+G R A VGD Sbjct: 94 INIVLDSASAAAVVDAVLEAGNAYGKNDHLGGETLNLEFVSANPTGPIHIGGTRWAAVGD 153 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 ++A ++ +G +V REYY ND G QIN A S+ A + ++ P Y G Y+ Sbjct: 154 SMARVLEANGAKVVREYYFNDHGEQINRFAKSLV----AAAHGEET--PIDGYKGAYIDE 207 Query: 209 VGKELADKYSS---ELLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDL 249 + + + D+ S ++L+ P ++K P+ + S Q M IR + Sbjct: 208 IAQRVIDEAKSDGIDILDLPRIDGGKDDKGEPLGEGDSEQREEFRKRAVPMMFDEIRRSM 267 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 K + D++ E+ + + I +L +G +YE K T Sbjct: 268 KNFRVNFDVWFHENSLYSN--GEVDKAIADLRERGDIYE------KDGAT---------- 309 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKR 366 F ST GDD DR ++KSDG+Y YFAAD+AY++ K R D IY++G+DH GY+ R Sbjct: 310 WFESTKHGDDKDRVIIKSDGNYAYFAADIAYYRNKRHREADPADVAIYMLGADHHGYIGR 369 Query: 367 LEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425 + A+ AA ++ + + +L+ +LV + +DG ++MSKRAG+ +T+ + + +G D+ R+ Sbjct: 370 MMAMCAAFGDEPGRNMQILIGQLVNVMKDGKAVRMSKRAGNVVTIDDLTEAIGVDASRYS 429 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 + + +D D + S ENPV+YVQYA+AR ++ R A D Sbjct: 430 LARTDYNSPVDIDLNLLASHSNENPVYYVQYAHARSCNVDRNAAAAGITYDG-------- 481 Query: 486 PQESEFDT-SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-------- 536 S DT ++ +++ LA++P ++ A + P+++A YL DLA+ +H W Sbjct: 482 ADVSLLDTVADGEVLAALAQWPALLREAGDLRAPHRVAHYLEDLAATYH-KWYNVERVVP 540 Query: 537 -------SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + G + +R +A RL+L AV ++I GL+++GV +P+ M Sbjct: 541 MALTDPEARGEDAEAVRIAKAPEPARAAARLKLNDAVRTVIAEGLDLLGVTAPDRM 596 >gi|91781601|ref|YP_556807.1| arginyl-tRNA synthetase [Burkholderia xenovorans LB400] gi|123359228|sp|Q146I4|SYR_BURXL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|91685555|gb|ABE28755.1| arginyl-tRNA synthetase [Burkholderia xenovorans LB400] Length = 596 Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 190/587 (32%), Positives = 300/587 (51%), Gaps = 60/587 (10%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87 I +ERP+ AHG ++ N AM L++PL +P +A+ IV + P V++ +AG G Sbjct: 37 ITLERPKVAAHGDVACNVAMQLAKPLRANPRQLAQQIVDALLAQPGARDLVEAAEVAGPG 96 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FINL L+ + + +++++ +GR+ G V IEFVSANPTGP+HVGH R A +G Sbjct: 97 FINLRLTAAAKQAVIAAVFAEKERFGRSQRDAGKHVLIEFVSANPTGPLHVGHGRQAALG 156 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D L++++A G++V RE+Y NDAG QI TLALS R + L D P Y G Y+ Sbjct: 157 DALSNVLASQGWDVHREFYYNDAGVQIQTLALSTQAR-ARGLAPGDEGWPASAYNGEYIA 215 Query: 208 HVGKE------LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 + K+ +A + + + L ++ ++V + + DL+A ++ D + Sbjct: 216 DIAKDYLNGATVAASDGEPVTGARDVEDLEAIRRFAVAYLRREQDMDLQAFGVKFDQYYL 275 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E ++ + + L G YE L R+T GDD D Sbjct: 276 ESSLYK--EGRVEKTVAALIAAGKTYE----------------QEGALWLRTTDDGDDKD 317 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKA 379 R + K+DG+YTYF D+AY K+ERGF +I + GSDH G + R+ A + K Sbjct: 318 RVMRKTDGTYTYFVPDVAYHVAKWERGFTKVINIQGSDHHGTIARVRAGLQGLGIGIPKG 377 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD---------EV------------G 418 + +L ++V + R+G +K+SKRAG ++T+R +++ EV G Sbjct: 378 YPDYILHKMVTVMRNGEEVKISKRAGSYVTVRDLIEWSGGATPGSEVDVDLIDEETIRRG 437 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+VRF ++ RK FD +Q+ ENPV YVQYA+AR S+ + K + + Sbjct: 438 RDAVRFFLISRKADTEFVFDIDLALKQNDENPVHYVQYAHARICSVIAECKARYNMDEST 497 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L +V P SE + L+ LAE+P ++++A P+ +AFYL DLA FH + Sbjct: 498 LADVDVTPLTSE---RAMALLNKLAEFPDMLQHAADELAPHAVAFYLRDLAGEFHSFY-- 552 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N + V ++ R+ L+ A ++ +GL IGV +P +M Sbjct: 553 ---NDKAERVLVDDAAERNARVALLAATRQVLANGLATIGVSAPVKM 596 >gi|306822087|ref|ZP_07455470.1| arginine--tRNA ligase [Bifidobacterium dentium ATCC 27679] gi|309802514|ref|ZP_07696619.1| arginine--tRNA ligase [Bifidobacterium dentium JCVIHMP022] gi|304554636|gb|EFM42540.1| arginine--tRNA ligase [Bifidobacterium dentium ATCC 27679] gi|308220831|gb|EFO77138.1| arginine--tRNA ligase [Bifidobacterium dentium JCVIHMP022] Length = 596 Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 187/596 (31%), Positives = 312/596 (52%), Gaps = 72/596 (12%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 + ++ + RP+D AHG ++NAAM L++ G+ P +AEL A + + SV +AG GF Sbjct: 34 VSKLTVMRPKDRAHGDWASNAAMQLAKKAGMKPHDLAELFAAELAQSDGIKSVEVAGPGF 93 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 IN+ L + ++ +++ +G YG+N G +N+EFVSANPTGP+H+G R A VGD Sbjct: 94 INIVLDSASAAAVVDAVLEAGNAYGKNDHLGGETLNLEFVSANPTGPIHIGGTRWAAVGD 153 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 ++A ++ +G +V REYY ND G QIN A S+ A + ++ P Y G Y+ Sbjct: 154 SMARVLEANGAKVVREYYFNDHGEQINRFAKSLV----AAAHGEET--PIDGYKGAYIDE 207 Query: 209 VGKELADKYSS---ELLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDL 249 + + + D+ S ++L+ P ++K P+ + S Q M IR + Sbjct: 208 IAQRVIDEAKSDGIDILDLPRIDGGKDDKGEPLGEGDSEQREEFRKRAVPMMFDEIRRSM 267 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 K + D++ E+ + + I +L +G +YE K T Sbjct: 268 KNFRVNFDVWFHENSLYS--DGEVDKAIADLRERGDIYE------KDGAT---------- 309 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKR 366 F ST GDD DR ++KSDG+Y YFAAD+AY++ K R D IY++G+DH GY+ R Sbjct: 310 WFESTKHGDDKDRVIIKSDGNYAYFAADIAYYRNKRHREADPADVAIYMLGADHHGYIGR 369 Query: 367 LEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425 + A+ AA ++ + + +L+ +LV + +DG ++MSKRAG+ +T+ + + +G D+ R+ Sbjct: 370 MMAMCAAFGDEPGRNMQILIGQLVNVMKDGKAVRMSKRAGNVVTIDDLTEAIGVDASRYS 429 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 + + +D D + S ENPV+YVQYA+AR ++ R A D Sbjct: 430 LARTDYNSPVDIDLNLLASHSNENPVYYVQYAHARSCNVDRNAAAAGITYDG-------- 481 Query: 486 PQESEFDT-SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-------- 536 S DT ++ +++ LA++P ++ A + P+++A YL DLA+ +H W Sbjct: 482 ADVSLLDTVADGEVLAALAQWPALLREAGDLRAPHRVAHYLEDLAATYH-KWYNVERVVP 540 Query: 537 -------SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + G + +R +A RL+L AV ++I GL+++GV +P+ M Sbjct: 541 MALTDPEARGEDAEAVRIAKAPEPARAAARLKLNDAVRTVIAEGLDLLGVTAPDRM 596 >gi|194337845|ref|YP_002019639.1| arginyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1] gi|229470726|sp|B4SH34|SYR_PELPB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|194310322|gb|ACF45022.1| arginyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1] Length = 552 Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 187/567 (32%), Positives = 294/567 (51%), Gaps = 49/567 (8%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFI 89 +I+IE+P D G STN A++ ++ +P +A+ I+ + PD + + +AG GFI Sbjct: 23 QIIIEQPADKKFGDFSTNIALLAAKECRRNPRELAQTIIEHLSFPPDTIAKIEVAGAGFI 82 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N YL+P ++ + + +++ G EYG+ GKG K +E+VSANPTGP+ +G R V+GD Sbjct: 83 NFYLTPLFIMQSVEQVLLDGDEYGKGESGKGEKAIVEYVSANPTGPLTIGRGRGGVLGDC 142 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 +A+L A GY VTREYY NDAG Q+ L SV +RY + + P +Y G Y+ + Sbjct: 143 IANLFATQGYAVTREYYFNDAGRQMQILGESVRFRYLERC-GETIEFPATHYQGEYIGEI 201 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 +EL + + + L + + + I K + + + IR L+ L I+HD F +E + D Sbjct: 202 AEELFNDHGTALADSTD---VQIFKKRAEEIIFASIRKTLERLGIRHDSFFNEHTLYTPD 258 Query: 270 PSPI---RDIIDNLARQGYV--YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 + + +ID L + ++ Y+G F +T +G + D+ L Sbjct: 259 AGGVTGNQRVIDALREKEFIAEYDG------------------ATWFLTTKLGQEKDKVL 300 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINV 383 +KS G +Y D+AY KYERGF ++ V G+DH Y LEA+ + + I + Sbjct: 301 IKSSGEPSYRLPDIAYHITKYERGFGMIVNVFGADHIDEYPDVLEALKILGYDTR-HIKI 359 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443 + + V DG +KMS R G+ L ++D+VG+D+ R + R L+FD K Sbjct: 360 AINQFVTTTVDGQTLKMSTRKGNADLLDDLIDDVGADATRLFFIMRSKDSHLNFDVELAK 419 Query: 444 EQSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEFDTSELQL 498 +QSK+NPVFY+QYA+AR S+ R A+ D + L R P +ELQL Sbjct: 420 KQSKDNPVFYLQYAHARICSLLRMAQQEIGFDATSSPELHLLQRLTSP-------AELQL 472 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 L +YP +I+ + EP K+ YL+ LA FH + +E P L+ + Sbjct: 473 GSALLDYPDMIKTSLRLLEPQKMVEYLHSLAECFHRFY---QECPILK----AEPDIARA 525 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 RL L A ++ +G I+GV +P M Sbjct: 526 RLFLSVATRQVLRNGFRILGVSAPESM 552 >gi|310286780|ref|YP_003938038.1| arginyl-tRNA synthetase [Bifidobacterium bifidum S17] gi|311063676|ref|YP_003970401.1| arginyl-tRNA synthetase ArgS [Bifidobacterium bifidum PRL2010] gi|309250716|gb|ADO52464.1| arginyl-tRNA synthetase [Bifidobacterium bifidum S17] gi|310865995|gb|ADP35364.1| ArgS Arginyl-tRNA synthetase [Bifidobacterium bifidum PRL2010] Length = 598 Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 186/597 (31%), Positives = 307/597 (51%), Gaps = 76/597 (12%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 + + RP+D AHG ++NAAM L++ G+ P +AEL R+ + +V +AG GFIN Sbjct: 36 KFAVMRPKDRAHGDWASNAAMQLAKKAGMKPRDLAELFAERLTAADGISTVEVAGPGFIN 95 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + L + ++ ++ G YG+N G +N+EFVSANPTGP+H+G R A VGD++ Sbjct: 96 ITLDSASAAAVVDKVLADGAGYGKNAHLGGKTLNLEFVSANPTGPIHIGGTRWAAVGDSM 155 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A ++ +G +V REYY ND G QIN A S+ A + ++ P Y G Y+ + Sbjct: 156 ARVLEANGAKVVREYYFNDHGEQINRFAKSLV----AAAHGEET--PIDGYKGKYINEIA 209 Query: 211 KEL---ADKYSSELLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDLKA 251 + A+ ++L+ P ++ P+ + S Q M I+ +K Sbjct: 210 DRVIAEAEADGVDVLSLPRVDGGLDKDGNPLGEGDSEQREEFRKRAVPMMFDEIQRSMKE 269 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 ++ D++ E++ ++ + I+ L +G ++E K T F Sbjct: 270 FRVRFDVWFHENNLYK--DGEVDRAIEELRSRGDIFE------KDGAT----------WF 311 Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKRLE 368 ST GDD DR ++KS+G + YFAAD+AY+ K R D IY++G+DH GY+ R+ Sbjct: 312 ESTKHGDDKDRVIIKSNGDFAYFAADIAYYWNKRHRAVDPADVAIYMLGADHHGYIGRMM 371 Query: 369 AVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 A+ AA E + +L+ +LV + ++G P++MSKRAG+ +T+ +V+ VG D+ R+ + Sbjct: 372 AMCAAFGDEPGVNMQILIGQLVNVMKNGKPVRMSKRAGNVVTIDDLVEAVGVDAARYSLA 431 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLFPRNV 484 + +D D + S ENPV+YVQYA+AR ++ R A D L Sbjct: 432 RTDYNTSVDIDLDLLTSHSNENPVYYVQYAHARSCNVDRNAAAAGIGTEGADLSLL---- 487 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR---- 540 ++E D +++ LA++P + A + P+K+A YL DLA +H ++ R Sbjct: 488 ---DTEADG---EVLAALAQWPATLALAGDQRAPHKVAHYLEDLAGAYHKWYNVERVVPM 541 Query: 541 --ENPRLRFVQANNRKLTM----------MRLQLVHAVASIINSGLNIIGVESPNEM 585 +P R A L + RL+L AV ++I SGL+++GV +P++M Sbjct: 542 ALTDPEERLDDAAREALRIAKNPEPARAAARLKLNDAVRTVIASGLDLLGVTAPDKM 598 >gi|163854373|ref|YP_001628671.1| arginyl-tRNA synthetase [Bordetella petrii DSM 12804] gi|229558756|sp|A9HVX4|SYR_BORPD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|163258101|emb|CAP40400.1| argS [Bordetella petrii] Length = 561 Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 186/570 (32%), Positives = 295/570 (51%), Gaps = 50/570 (8%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV----ARIKIDPDVDSVFIAGK 86 ++++ERP+ AHG ++TN AM L++P +P +A+ IV A V++ IAG Sbjct: 27 QVLLERPKVAAHGDVATNIAMQLAKPARRNPRELAQGIVDALMAETAARALVENAEIAGP 86 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GFIN ++ + + ++ ++ G YG + G KV +EFVSANPTGP+HVGH R A + Sbjct: 87 GFINFRITAAARQAVIQAVAEQGEAYG-HAPATGEKVLVEFVSANPTGPLHVGHARQAAL 145 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206 GD + L A +G +VTRE+Y NDAG QI LA+SV R + + + D P Y G Y+ Sbjct: 146 GDAICRLYAATGRDVTREFYYNDAGNQIQNLAVSVQAR-ARGIAPDSPDYPADGYKGDYI 204 Query: 207 KHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKIIRD---DLKALNIQHDIFI 260 + ++ + + + + + + D V A+ + R+ DL+A + D + Sbjct: 205 VDIAQDFIARKTLQAADGAAVTASGDVDNLDDIRVFAVAYLRREQDLDLQAFGLAFDNYY 264 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV--GD 318 E + + + L +G+ YE L R+T + GD Sbjct: 265 LESSLYTS--GRVEQTVQALVAKGHTYE----------------QDGALWLRTTELGTGD 306 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK- 377 D DR + KS+G YTYF D+AY K K+ERGF + + + GSDH G V R+ A A+ E Sbjct: 307 DKDRVMRKSEGGYTYFVPDVAYHKAKWERGFRHAVNIQGSDHHGTVARVRAGLQALEEGI 366 Query: 378 -KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K +L ++V++ R G +K+SKRAG ++TLR ++D VG D+VR+ ++ R+ Sbjct: 367 PKDYPAYVLHKMVKVMRGGEEVKISKRAGSYVTLRDLIDWVGRDAVRYFLIQRRADTEFV 426 Query: 437 FDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495 FD +S ENPV+Y+QYA+AR C I D D ++ +EF Sbjct: 427 FDIDLALSKSDENPVYYIQYAHARICSMIANAGAD---DARIAQADTALLTAPTEF---- 479 Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555 L+ LA +P+++ A P+ +AF+L D AS FH ++ R V ++ L Sbjct: 480 -ALMQRLASFPQIVAQAAQELAPHHIAFWLRDCASDFHAWYNAER-------VLVDDEPL 531 Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL+L ++ +GL ++GV +P M Sbjct: 532 KLARLRLAATTRQVLANGLALLGVSAPQRM 561 >gi|296126409|ref|YP_003633661.1| arginyl-tRNA synthetase [Brachyspira murdochii DSM 12563] gi|296018225|gb|ADG71462.1| arginyl-tRNA synthetase [Brachyspira murdochii DSM 12563] Length = 529 Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 197/578 (34%), Positives = 297/578 (51%), Gaps = 65/578 (11%) Query: 9 SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68 + L++YLK+ D K +I I I D G + AAM L++ L +PL IA I Sbjct: 12 TALEDYLKDTDVK-----EIDSYIEIGYAADDKFGDYACPAAMRLAKVLKKNPLEIAASI 66 Query: 69 VARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127 KID + + GFINL LS +Y+ + ++ ++ + YG+N + K+ IE+ Sbjct: 67 TE--KIDKKYFEKIEAVKPGFINLTLSYNYINECINDLL-NNDNYGKNTVEDKKKILIEY 123 Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187 VSANPTGP+H+GH R A +G L++++ ++G+EV +E+Y+NDAG QI L SV Sbjct: 124 VSANPTGPLHIGHGRWAAIGSALSNILKYAGHEVYQEFYVNDAGEQITKLNESV------ 177 Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247 ++PE Y G Y+K V K L P KD +++ K+ Sbjct: 178 NAVKEGREIPEDGYHGEYIKEVAK---------LDGVP--------KDIILESQKKL--- 217 Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307 L+ D + SE G + +D L ++G ++E + Sbjct: 218 -LERFGTHMDNYASELKIREG--GELEKTMDFLDKEGLLFE----------------EDN 258 Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367 + FRST GDD DR + KS+GSYTYFA D+ Y K K +RG+ +I ++G+DH GYV R+ Sbjct: 259 AVWFRSTKYGDDKDRVVKKSNGSYTYFAPDITYHKNKIDRGYHYLIDILGADHHGYVPRI 318 Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 A AVS+ A + V+L +LVRLYR ++MSKR GD I+L V+DE+G D R+ +L Sbjct: 319 TAAVRAVSKDTASLKVILGQLVRLYRGNELVRMSKRTGDMISLEDVIDEIGVDPTRYFLL 378 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487 R S LDFD K++ +NPV+YVQYAYAR +IF + ++ D D P ++ Sbjct: 379 MRSYSSSLDFDLELAKKKDNDNPVYYVQYAYARVCNIFFKMEEKNMSYD-DAKPFDISKI 437 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 +E S L+L + +P + + + E Y L Y Y++AS H + Sbjct: 438 ANE---SSLKLAKIILRFPDEVYESAKSLEVYTLINYTYEIASALHKFYYDN-------I 487 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V N ++ RL LV AV ++ +IIG+ M Sbjct: 488 VLEENAEIRQERLTLVKAVKKVLGLCFDIIGISKVERM 525 >gi|227503835|ref|ZP_03933884.1| arginyl-tRNA synthetase [Corynebacterium striatum ATCC 6940] gi|227199659|gb|EEI79707.1| arginyl-tRNA synthetase [Corynebacterium striatum ATCC 6940] Length = 553 Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 184/581 (31%), Positives = 298/581 (51%), Gaps = 33/581 (5%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 D S +K + + +++ +L + + +ERPR+ HG +TN A+ +++ G++P + Sbjct: 5 DLSVLIKETAVAVLSEHELDTAVLPETVTVERPRNPEHGDYATNLALQVAKKAGVNPREL 64 Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 A + + +D IAG GF+N+ L+ + I+ + +G YG N KG K+N Sbjct: 65 ATWLAEALAKHDAIDVAEIAGPGFLNIRLAAAAQGAIVDQVRQAGTNYGHNDAYKGQKIN 124 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGP+H+G R A VGD+L ++ SG EVTREYY ND G QI+ + S+ Sbjct: 125 LEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAEVTREYYFNDHGRQIDRFSNSLVAA 184 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 + PE Y G Y++ + + ++ + L E++ + V+ M Sbjct: 185 AK------GEPTPEDGYGGEYIQEIAANVQNQVP-DALEGTEDEVREKFRAAGVEMMFAH 237 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 I++ L + D++ E+ +L G V + + K +K Sbjct: 238 IKESLHEFGVDFDVYFHEN---------------SLFESGAVDKAV---AHLKDNEKLYF 279 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 + +ST GDD DR ++KSDG Y A D+AY K++RG D IY++G+DH GY+ Sbjct: 280 EDGAWWLKSTDYGDDKDRVVIKSDGDAAYIAGDIAYVADKFDRGHDLAIYMLGADHHGYI 339 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 RL A AAA+ Q+ VL+ ++V L RDG ++MSKRAG ITL +V+ +G D R+ Sbjct: 340 ARLRAAAAAMGYNPEQVEVLIGQMVNLLRDGKAVRMSKRAGTVITLDDLVEAIGVDGARY 399 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 ++ + +D D QS +NPV+YVQY +AR SI R+A+ +L D Sbjct: 400 SLVRSSVDQSIDIDLGLWASQSSDNPVYYVQYGHARICSILRKAQ----ELGLDAAAMAD 455 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 E LI L E+P V+ A +EP+++A + DLA+VFH + + P+ Sbjct: 456 ADLALLTHEKEGDLIRTLGEFPEVVSTAATLREPHRIARFAEDLAAVFHRFYDQCQVLPK 515 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + RL L A ++ + L ++GV +P +M Sbjct: 516 ---AGEETQPIHIARLALADAARQVLANALTMVGVSAPEKM 553 >gi|293363536|ref|ZP_06610292.1| arginine--tRNA ligase [Mycoplasma alligatoris A21JP2] gi|292552885|gb|EFF41639.1| arginine--tRNA ligase [Mycoplasma alligatoris A21JP2] Length = 545 Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 197/589 (33%), Positives = 302/589 (51%), Gaps = 70/589 (11%) Query: 21 KIKVEKKILDRI-VIERPRDCA----------HGHLSTNAAMILSRPLGLDPLTIAELIV 69 KI+++ KIL+ + +I + + A + ST+ A+I P L+P+ +A LI Sbjct: 3 KIELKSKILEELKLIAKELNLAKEPFLIEPKTNADFSTSMAIINKTP-ELNPIALANLIK 61 Query: 70 ARIKIDPD---VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 ++ + ++ V +AG GFINL+L+ +Y+ + ++ I+ G YG+ K +NIE Sbjct: 62 EKLLTKSNELYLEEVEVAGPGFINLFLNKNYIVQAINDILKKGKNYGKG--NKKGSINIE 119 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 +VSANPTG +HVGH R A +G T+A++ F+G ++TREYYINDAG QI+ LA S+F RYQ Sbjct: 120 WVSANPTGYLHVGHARNAAIGSTVANICEFAGLKITREYYINDAGNQIDLLANSLFSRYQ 179 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP-EEKWLPIVKDYSVQAMMKII 245 Q L+N D +PE Y G ++ ++ +Y+ + E + L + K V+ + I Sbjct: 180 Q-LFNKDYPMPEECYRGEDIQWAADQMFKRYADKFKGIKLEGQVLEVFKKDGVELFLGEI 238 Query: 246 RDDLKALN-IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 + DL+ I+ DI+ SE + D I+D + K K T + D Sbjct: 239 KKDLEKFGGIKFDIWFSEKSLYENDQKIIKDAL----------------AKIKNTYQKD- 281 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM---GSDHS 361 +T+ GDD DR L+KSDGS TYF D+AY KY R D VM G+DHS Sbjct: 282 --GATWLNTTLHGDDKDRVLVKSDGSLTYFTPDIAYHNIKYHRNNDKDTVVMNVWGADHS 339 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 GY+KR++ + + VL +LVRL ++G KMSKR G LR VD VG DS Sbjct: 340 GYIKRMKCAMEDIGNNPDNLVVLCMQLVRLVKNGEEYKMSKRRGTSFFLREFVDLVGVDS 399 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 RF++L R + LDFD K ++ +NP VQYA AR S+ ++ L+ F Sbjct: 400 ARFILLDRTYNSKLDFDIDIAKNKTNDNPAILVQYANARAYSLLQKTTYDLNKLEMKTFN 459 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH--- 538 +V + +LI L E+P +I+ + L YL LA F+ +S+ Sbjct: 460 SDV----------DQKLISTLLEFPEIIDKSADLYMTNILTQYLIKLAKDFNSWYSNSDK 509 Query: 539 --GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G EN L LV + +++ +G+ +IG+ ++M Sbjct: 510 VIGHENEE-------------SLLALVKSTNTVLETGMKLIGITINHKM 545 >gi|300705360|ref|YP_003746963.1| arginyl-tRNA synthetase [Ralstonia solanacearum CFBP2957] gi|299073024|emb|CBJ44381.1| Arginyl-tRNA synthetase [Ralstonia solanacearum CFBP2957] Length = 600 Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 200/601 (33%), Positives = 300/601 (49%), Gaps = 77/601 (12%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87 IV+ERP+ AHG ++ N A+ L++PLG +P +A I I+ D V +V IAG G Sbjct: 30 IVLERPKQAAHGDIACNVALQLAKPLGTNPRELANRIADGIRADARGQRLVSAVEIAGPG 89 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FINL LSP+ +L+++ G YG + G V +EFVSANPTGP+HVGH R A +G Sbjct: 90 FINLRLSPTARADVLAAVFAEGDRYGAADLHDGAPVLVEFVSANPTGPLHVGHGRQAALG 149 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D LA+L+ + G++V RE+Y NDAG QI+ LA+SV R + L ++ PE Y G Y+ Sbjct: 150 DALAALLEWQGHKVHREFYYNDAGVQIHNLAVSVQAR-ARGLKPGEAGWPEAAYNGDYIA 208 Query: 208 HV------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 + GK + + + + + ++ ++V + DL+A ++ D + Sbjct: 209 DIAADYLAGKTVRASDGEPVTGACDVENIEAIRRFAVTYLRNEQDIDLQAFGVKFDHYYL 268 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E + +R +D L G YE L R+T GDD D Sbjct: 269 ESSLYA--DGKVRQTVDALIAAGKTYE----------------QDGALWLRTTDDGDDKD 310 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKA 379 R + KSDGSYTYF D+AY K+ RGF +I V GSDH G + R+ A + K Sbjct: 311 RVMRKSDGSYTYFVPDVAYHTTKWGRGFTQVINVQGSDHHGTIARVRAGLQGLDIGIPKG 370 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV-------------VDEV--------- 417 + +L ++V + +DG +K+SKRAG ++T+R + VD + Sbjct: 371 YPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIEWSNGDAESEAGVDTIRACVESGAP 430 Query: 418 --------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF---- 465 G D+VRF +L RK FD +QS ENPV+YVQYA+AR S+F Sbjct: 431 SWPERFTRGRDAVRFFLLSRKADTEFVFDVDLALKQSDENPVYYVQYAHARICSVFEQWH 490 Query: 466 -RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R+ D+ DL + + L+ LA +P ++ +A P+ +AFY Sbjct: 491 AREGGDVASLAGADL----AAVAGPDASPQAVALVQRLAAFPDMLADAARELAPHAVAFY 546 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 L DLA FH ++ R V ++ + RL L+ A ++ +GL +IGV +P + Sbjct: 547 LRDLAGDFHAFYNADR-------VLVDDDAVKRARLALLAATRQVLRNGLAVIGVSAPQK 599 Query: 585 M 585 M Sbjct: 600 M 600 >gi|188590897|ref|YP_001795497.1| arginyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424] gi|238692922|sp|B2AG76|SYR_CUPTR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|170937791|emb|CAP62775.1| ARGINYL-tRNA SYNTHETASE (ARGININE--tRNA LIGASE) PROTEIN [Cupriavidus taiwanensis LMG 19424] Length = 595 Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 200/595 (33%), Positives = 295/595 (49%), Gaps = 64/595 (10%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IA 84 L + ERP+ AHG L+ N AM ++R L +P +A+ IVA ++ D + IA Sbjct: 27 LPAVTFERPKVAAHGDLACNVAMQVARALKSNPRELAQRIVAAVEADARAQGLVAGMDIA 86 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 G GFINL L+PS +L +++ G YG G +V +EFVSANPTGP+HVGH R A Sbjct: 87 GPGFINLRLTPSAKADVLRAVLNEGDHYGARERGVHGQVLVEFVSANPTGPLHVGHGRQA 146 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204 +GD LA+L+++ G+ V RE+Y NDAG QI TLALSV R + L D+ PE Y G Sbjct: 147 ALGDALANLLSWQGWHVHREFYYNDAGVQIQTLALSVQAR-ARGLKPGDASWPEAAYNGD 205 Query: 205 YLKHVGKE-LADKYSSELLNFPEEKWLPI-----VKDYSVQAMMKIIRDDLKALNIQHDI 258 Y+ + + LA K S P + ++ ++V + DL+A ++ D Sbjct: 206 YIADIAADFLAGKTVSASDGEPVTASGNVEDIDSIRKFAVTYLRNEQDIDLQAFGVKFDR 265 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + E + + + +L +G YE L R+T GD Sbjct: 266 YYLESSLY--SDGRVDAAVQSLIDKGKTYE----------------SEGALWLRTTDDGD 307 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSE 376 D DR + KSDG+YTYF D+AY K+ERGF +I V GSDH G + R+ A + Sbjct: 308 DKDRVMKKSDGTYTYFVPDVAYHTTKWERGFTKVINVQGSDHHGTIARVRAGLQGLDIGI 367 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV------DEV------------- 417 + + +L ++V + ++G +K+SKRAG ++T+R ++ DE Sbjct: 368 PQGYPDYVLHKMVTVMKNGEEVKISKRAGSYVTVRDLIEWSNGGDETIRGCLEQGVADWP 427 Query: 418 -----GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 G D+VRF +L RK FD +Q+ ENPV+YVQYA+AR SIF Sbjct: 428 AHFTRGRDAVRFFLLSRKADTEFVFDVDLALKQNDENPVYYVQYAHARICSIFESWGGAD 487 Query: 473 PDLDFDLFPRNVIPQESEFDTS--ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 + + + D S L L LAE+P ++ A P+ +AFYL DLA Sbjct: 488 WESRLAELAGADLSAVTGADASAQALALGRRLAEFPDMLAAAAAELAPHAVAFYLRDLAG 547 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 FH ++ R V ++ + RL L+ A ++ +GL +IGV +P M Sbjct: 548 DFHAFYNADR-------VLVDDEAVKRARLALLAATRQVLRNGLAVIGVSAPRRM 595 >gi|299068188|emb|CBJ39407.1| Arginyl-tRNA synthetase [Ralstonia solanacearum CMR15] Length = 600 Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 200/601 (33%), Positives = 298/601 (49%), Gaps = 77/601 (12%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87 IV+ERP+ AHG ++ N A+ L++PLG +P +A I I+ D V +V IAG G Sbjct: 30 IVLERPKQAAHGDIACNVALQLAKPLGTNPRELANRIADGIRADARGQRLVSAVEIAGPG 89 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FINL LSP+ +L+++ G YG + G V +EFVSANPTGP+HVGH R A +G Sbjct: 90 FINLRLSPTARTDVLTAVFAEGDRYGAADLHDGAPVLVEFVSANPTGPLHVGHGRQAALG 149 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D LA+L+ + G++V RE+Y NDAG QI+ LA+SV R + D+ PE Y G Y+ Sbjct: 150 DALAALLEWQGHKVHREFYYNDAGVQIHNLAVSVQAR-ARGFKPGDAGWPEAAYNGDYIA 208 Query: 208 HV------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 + GK + + + + + ++ ++V + DL+A ++ D + Sbjct: 209 DIAADYLAGKTVRASDGEPVTGARDVENMEAIRRFAVTYLRNEQDIDLQAFGVKFDHYYL 268 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E + ++ +D L G YE L R+T GDD D Sbjct: 269 ESSLYA--DGKVQQTVDALIAAGKTYE----------------QEGALWLRTTDDGDDKD 310 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKA 379 R + KSDGSYTYF D+AY K+ RGF +I V GSDH G + R+ A + K Sbjct: 311 RVMRKSDGSYTYFVPDVAYHTTKWGRGFTQVINVQGSDHHGTIARVRAGLQGLDIGIPKG 370 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV-------------VDEV--------- 417 + +L ++V + +DG +K+SKRAG ++T+R + VD + Sbjct: 371 YPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIEWSNGDVESEAGVDTIRACVDSGAP 430 Query: 418 --------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF---- 465 G D+VRF +L RK FD +QS ENPV+YVQYA+AR S+F Sbjct: 431 NWPGRFTRGRDAVRFFLLSRKADTEFVFDVDLALKQSDENPVYYVQYAHARICSVFEQWH 490 Query: 466 -RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R+ D DL E + L+ +A +P V+ +A P+ +AFY Sbjct: 491 AREGGDAASLAGADL----AAVAGPEASPQAVALVQRIAAFPDVLADAARELAPHAVAFY 546 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 L DLA FH ++ R V ++ + RL L+ A ++ +GL +IGV +P + Sbjct: 547 LRDLAGDFHAFYNADR-------VLVDDDAVKRARLALLAATRQVLRNGLAVIGVSAPQK 599 Query: 585 M 585 M Sbjct: 600 M 600 >gi|229817124|ref|ZP_04447406.1| hypothetical protein BIFANG_02382 [Bifidobacterium angulatum DSM 20098] gi|229784913|gb|EEP21027.1| hypothetical protein BIFANG_02382 [Bifidobacterium angulatum DSM 20098] Length = 596 Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 187/596 (31%), Positives = 307/596 (51%), Gaps = 76/596 (12%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 + + RP+D AHG ++NAAM L++ G+ P AEL A + + SV +AG GFIN Sbjct: 36 KFAVMRPKDRAHGDWASNAAMQLAKKAGMKPRDFAELFAAELVKADGIKSVEVAGPGFIN 95 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + L + ++ +++ +G YG+N G +N+EFVSANPTGP+H+G R A VGD++ Sbjct: 96 IVLDSASAAAVVDAVLEAGSAYGKNDHLGGETLNLEFVSANPTGPIHIGGTRWAAVGDSM 155 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A ++ +G +V REYY ND G QIN A S+ A + ++ +G Y G Y+ + Sbjct: 156 ARVLEANGAKVVREYYFNDHGEQINRFAKSLV-----AAAHGETTPIDG-YKGAYIDEIA 209 Query: 211 KELADKYSS---ELLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDLKA 251 + + D+ ++ ++LN P +E P+ + S Q M I+ +K Sbjct: 210 QRVIDEATADGVDILNLPRVDGGSDENGEPLGEGDSEQREEFRKRAVPMMFDEIQKSMKN 269 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 + D++ E+ + + I +L +G ++E K T F Sbjct: 270 FRVNFDVWFHENSLYS--DGEVDKAIADLRERGDIFE------KDGAT----------WF 311 Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLE 368 ST GDD DR ++KSDG+Y YFAAD+AY++ K R D IY++G+DH GY+ R+ Sbjct: 312 ASTKHGDDKDRVIIKSDGNYAYFAADIAYYRNKRHREVNPADVAIYMLGADHHGYIGRMM 371 Query: 369 AVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 A+ A +K + + +L+ +LV + +DG ++MSKRAG+ +T+ + D +G D+ R+ + Sbjct: 372 AMCEAFGDKPGENMQILIGQLVNVMKDGKAVRMSKRAGNVVTIDDLTDAIGVDASRYSLA 431 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNV 484 + +D D + S ENPV+YVQYA+AR ++ R A + D L Sbjct: 432 RTDYNSPVDIDLNLLASHSNENPVYYVQYAHARSCNVDRNAATAGITYEGADLSLLD--- 488 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-------- 536 P + E ++ LA++P ++ A + P+++A YL DLA+ +H W Sbjct: 489 TPADGE-------VLAALAQWPALLREAGDLRAPHRVAHYLEDLAATYH-KWYNVERVVP 540 Query: 537 -------SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + G E LR +A RL+L AV ++I GL+++G +P +M Sbjct: 541 MELTDPEARGEEAEALRIAKAPEPARAAARLKLNDAVKTVIAEGLDLLGCAAPEKM 596 >gi|94267070|ref|ZP_01290710.1| Arginine--tRNA ligase [delta proteobacterium MLMS-1] gi|93452227|gb|EAT02881.1| Arginine--tRNA ligase [delta proteobacterium MLMS-1] Length = 558 Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 185/560 (33%), Positives = 294/560 (52%), Gaps = 40/560 (7%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGF 88 +E P+ G +TN AM+++ +P +A +V + + +F +AG GF Sbjct: 32 AVEEPKRAGQGDFATNLAMVVAGREKRNPRELAGQLVELLNGEEAARGLFARIEVAGPGF 91 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 +N +L P+ ++++ I G E+ R+ +G G KV +EFVSANPTGP+ VGH R AV+GD Sbjct: 92 VNFFLHPAVWQQVVPEIRRRGGEFARSTVGGGRKVLVEFVSANPTGPLSVGHGRQAVLGD 151 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 +A L+ +G+ VTREYY NDAG Q+ L S RY + L ++ PE Y G Y++ Sbjct: 152 AIARLLEATGHAVTREYYYNDAGRQMRVLGESTRARYLEEL-GLPAEFPEDGYQGEYIRE 210 Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 + +EL + + ++ + +A+ I + L L I+ D + +E + Sbjct: 211 IARELVAQQGD---GWRDQSDTAPFTARAEEAIFADINNTLARLGIKFDNYYNERSLY-- 265 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 + I D++ L +G VYE + F+++ +G + DR ++KS Sbjct: 266 EKGLIDDVVAILRDKGLVYE----------------QDGAVWFKTSALGLEQDRVIIKSS 309 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 G TY D+AY + K+ RGFD M+ V GSDH V + A A+ ++ ++ + Sbjct: 310 GEPTYRLPDIAYHREKFRRGFDWMVNVFGSDHIATVPDVLAGVRALGYDSQRVTPVIHQF 369 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V L RDG +KMS R F+T+ +++EVG+D RF L RK L+FD QS+E Sbjct: 370 VTLLRDGQQVKMSTRKATFVTVDELLEEVGADVTRFFFLMRKADSQLEFDLALAASQSQE 429 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI--PQESEFDTSELQLIVHLAE-Y 505 NPV+YVQYA+AR SI RQA L P + P S +E ++ Sbjct: 430 NPVYYVQYAHARLCSIARQAA----AQGLQLAPSDAADGPDYSLLGEAEELELLAAMAGL 485 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 P ++E+A +A EP++L FYL DLA+ FHG+++ R + +++ L++ RL L A Sbjct: 486 PSLLESAALALEPHRLVFYLQDLAARFHGYYNRHR-------IVGDDQALSLARLALADA 538 Query: 566 VASIINSGLNIIGVESPNEM 585 + +I L +IGV++P M Sbjct: 539 LRRVIADTLGLIGVKAPESM 558 >gi|300870723|ref|YP_003785594.1| arginyl-tRNA synthetase ArgS [Brachyspira pilosicoli 95/1000] gi|300688422|gb|ADK31093.1| arginyl-tRNA synthetase, ArgS [Brachyspira pilosicoli 95/1000] Length = 529 Score = 283 bits (725), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 197/576 (34%), Positives = 289/576 (50%), Gaps = 65/576 (11%) Query: 11 LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 L NYLK+ID + I I I D G ++ AM L++ L +P IA IV Sbjct: 14 LCNYLKDIDVE-----NIDSYIDIGYTVDEKFGDYASPVAMRLAKALKKNPFDIANDIVK 68 Query: 71 RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130 I D+V +A GFINL LS Y+ + ++ ++ +YG+N ++ +E+VSA Sbjct: 69 LID-KKYFDNVEVARPGFINLTLSKDYINECINQLLEDD-DYGKNSAEDKKRILVEYVSA 126 Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190 NPTGP+H+GH R A +G L++++ + G++V +E+Y+NDAG QI L SV Sbjct: 127 NPTGPLHIGHGRWAAIGSALSNILKYVGHDVYQEFYVNDAGEQITKLNESV------NAV 180 Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250 ++PE Y G Y+K + K + P KD ++ K+ L+ Sbjct: 181 KEGREIPEDGYHGAYIKDIAK---------MEGVP--------KDIILEQQRKL----LE 219 Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310 D + SE G + ID L +G ++E + Sbjct: 220 RFRTYMDNYASELKIREG--GELEKTIDYLNEKGLLFE----------------EDNATW 261 Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 FRST GDD DR + KS+GSYTYFA D+ Y K K +RG+ +I ++G+DH GYV R+ A Sbjct: 262 FRSTEYGDDKDRVVKKSNGSYTYFAPDITYHKNKIDRGYKYLIDILGADHHGYVPRITAA 321 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430 AVS+ A + V+L +LVRLYR ++MSKR GD I+L V+DE+G D R+ +L R Sbjct: 322 VRAVSDDTADLKVILGQLVRLYRGNELVRMSKRTGDMISLEEVIDEIGVDPTRYFLLMRS 381 Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-LFPRNVIPQES 489 S LDFD K++ +NPV+YVQYAYAR +IF + ++ D++ F N I E Sbjct: 382 YSSSLDFDLELAKKKDNDNPVYYVQYAYARVCNIFFKLEEKNMKYDYNKKFDINKISNE- 440 Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549 S L+L + +P I + + E Y L Y YD+AS H + V Sbjct: 441 ----STLKLAKMILRFPDEIYESAKSLEVYTLLNYTYDVASALHKFYYDN-------IVL 489 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N + RL L+ AV I+ +IIG+ M Sbjct: 490 EENDDIRQERLTLIRAVKKILGICFDIIGITKIERM 525 >gi|118474762|ref|YP_892573.1| arginyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40] gi|166232772|sp|A0RQU0|SYR_CAMFF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|118413988|gb|ABK82408.1| arginyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40] Length = 531 Score = 283 bits (725), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 173/561 (30%), Positives = 300/561 (53%), Gaps = 44/561 (7%) Query: 27 KILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85 ++L R ++E+P+D H +T A L++ P IA + + + D I Sbjct: 11 RVLGRDFILEKPKDKNLAHYATPFAFSLAKEFKKSPAIIASQLALKFENHELFDVFSI-- 68 Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 G++N L +L + ++ + +G + IE++SANPTGP+H+GH R AV Sbjct: 69 NGYLNFKLKGEFLNSLANNALSLAESFGSKKPQSQKDIFIEYISANPTGPLHIGHVRGAV 128 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205 GDTLA + + G +V EYYINDAG QI+ L +S+ ++AL+N + P+ YY G Y Sbjct: 129 YGDTLARVARYIGLDVFTEYYINDAGNQIDLLGISISLFAREALFNENVQYPDKYYRGEY 188 Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 ++ + K K+ ++ + E + L + ++ ++KII+ DL+ + I + + SE Sbjct: 189 IEDIAKLALGKFGKDIF-YDESRNLELA-EFGKDEVLKIIKKDLQDVGIFIESWASEKSL 246 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 + + I LA G +YE K +TT STM+GDD DR ++ Sbjct: 247 Y----DELEGTIKKLASSGQMYE------KDQTT----------YIASTMLGDDSDRVVI 286 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 +SDG TY A D+ Y K+++G+ + I + G+DH GY+ R++A + ++++ V+L Sbjct: 287 RSDGRPTYLAGDIVYHDAKFKKGYKHYINIWGADHHGYIARIKAAINFLGYDESRLEVIL 346 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 ++V L ++G P KMSKRAG + + ++ E+GSD++RF+ + + N+ L+FD ++K++ Sbjct: 347 MQMVSLLKEGKPFKMSKRAGTSVLMSDILSEIGSDALRFIFISKANTSSLEFDIDELKKE 406 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE-SEFDTSELQLIVHLAE 504 NP+FY+ YA+AR +F +A + P +V+ + S D S L+ Sbjct: 407 DSSNPIFYINYAHARVNQVFAKASKL---------PNDVVGADLSNLDESGKNLLFEALI 457 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 P V+E+A ++ +K+ YL L++ FH ++ EN R V + N L+L Sbjct: 458 LPEVLEDAVTSRSLHKIPEYLKSLSASFHKFYN---EN---RVVGSKNEDEL---LKLFS 508 Query: 565 AVASIINSGLNIIGVESPNEM 585 VA I LN+IG+++ ++M Sbjct: 509 VVALSIKVALNLIGIKAKDKM 529 >gi|89899583|ref|YP_522054.1| arginyl-tRNA synthetase [Rhodoferax ferrireducens T118] gi|109895026|sp|Q220N0|SYR_RHOFD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|89344320|gb|ABD68523.1| arginyl-tRNA synthetase [Rhodoferax ferrireducens T118] Length = 565 Score = 283 bits (724), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 188/575 (32%), Positives = 291/575 (50%), Gaps = 55/575 (9%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA----RIKIDPDVDSVFIAGK 86 + V E P+ AHG L+T AAM L++PL L+P +AE + A R + V+++ IAG Sbjct: 26 KAVFESPKVAAHGDLATTAAMQLAKPLKLNPRQLAENLRAELLVRAPFERWVEAIDIAGP 85 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GFIN+ L P ++ + ++ G ++G G G ++ +EFVSANPTGP+HVGH R A + Sbjct: 86 GFINIKLKPEAKQQTVREVLSQGQQFGSQ-PGTGKRMLVEFVSANPTGPLHVGHGRQAAL 144 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG----YYP 202 GD + +L G+ V RE+Y NDAG QI TLA S R + D + P G Y Sbjct: 145 GDAICNLYQTQGWAVYREFYYNDAGVQIGTLASSTQLR-ARGFKPGDPEWPSGENAAAYN 203 Query: 203 GVYLKHVGKELADKYS--SELLNFPEEKWLPIVKDYSVQAMMKIIRD---DLKALNIQHD 257 G Y+ + + K + S+ F + + D + A+ + + DLKA + D Sbjct: 204 GDYIADIAADYLAKKTVHSDDRAFTASGDVEALDDIRLFAVAYLRHEQDLDLKAFAVHFD 263 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 + E + + D++ L G YE L +ST G Sbjct: 264 NYYLESSLYLS--GKVDDVVKRLHDAGKTYE----------------HDGALWLKSTEYG 305 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVS 375 DD DR + K DGSYTYF D+AY K+ERGF+ ++ + G+DH G + R+ A AA V Sbjct: 306 DDKDRVMRKGDGSYTYFVPDVAYHISKWERGFEKVVNIQGTDHHGTIARVRAGLQAANVG 365 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435 K + +L +VR+ R G +K+SKRAG ++TLR +++ D+VRF +L RK Sbjct: 366 IPKGYPDYVLHTMVRVVRGGEEVKISKRAGSYVTLRDLIEWTSKDAVRFFLLSRKPDTEY 425 Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIF-----RQAKDIFPDLDFDLFPRNVIPQESE 490 FD ++ +NPV+YVQYA+AR S+ ++ D+ DL P PQ Sbjct: 426 TFDVDLAVAKNNDNPVYYVQYAHARICSVLAAWREKEGGDVASLGQADLSPLQS-PQALA 484 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550 + YP ++ A P+ + FYL +LA+ +H ++ R + Sbjct: 485 LLLLLAK-------YPEMLTAAAAGFAPHDVTFYLRELAACYHSYYDAER-------ILV 530 Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + RL LV A A ++++GL ++GV +P +M Sbjct: 531 DDDLIKRARLALVAATAQVLHNGLAVLGVSAPQKM 565 >gi|317179286|dbj|BAJ57074.1| arginyl-tRNA synthetase [Helicobacter pylori F30] Length = 541 Score = 283 bits (724), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 164/514 (31%), Positives = 266/514 (51%), Gaps = 36/514 (7%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFI 89 VIE P+D HGH +T A L++ PL IAE + +I F +A KG+I Sbjct: 18 VIEYPKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGFFDSVVACKGYI 77 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 N LS +L + + +G + K+ +EFVSANPTGP+H+GH R AV GD Sbjct: 78 NFTLSLDFLERSTQKALELKERFGSQAKSERSQKIFLEFVSANPTGPLHIGHARGAVFGD 137 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 +LA + F G+EV REYY+ND G+QI L LSV+ Y++ + PE +Y G Y+ Sbjct: 138 SLAKIARFLGHEVLREYYVNDMGSQIRLLGLSVWLAYREHVLQESVTYPEVFYKGEYIIE 197 Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 + K+ + L EE + ++ Y+ M+ I+D+L AL I D + SE + + Sbjct: 198 IAKQANNDLEPSLFKENEETIIEVLSSYAKDLMLLEIKDNLDALGIHFDSYASEREVFKH 257 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 + + + L + +YE ++ +S++ D+ DR L+K D Sbjct: 258 KDA----VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKED 297 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 SYTY A D+ Y K+++ + I + G+DH GY+ R++A + ++ VLL ++ Sbjct: 298 KSYTYLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQM 357 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 VRL +D P KMSKRAG+FI ++ V+D+VG D++RF+ L ++ L+FD +K+Q Sbjct: 358 VRLLKDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSS 417 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYP 506 NP++Y+ YA +R ++ ++ F + I Q + + E L+ P Sbjct: 418 NPIYYIHYANSRIHTMLEKSP----------FSKEEILQTPLTNLNAEEKYLLFSALSLP 467 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 ++IE++ K+ Y LAS FH ++ G+ Sbjct: 468 KIIESSFEEYGLQKMCEYAKTLASEFHRFYNAGK 501 >gi|157364585|ref|YP_001471352.1| arginyl-tRNA synthetase [Thermotoga lettingae TMO] gi|157315189|gb|ABV34288.1| arginyl-tRNA synthetase [Thermotoga lettingae TMO] Length = 547 Score = 283 bits (724), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 183/549 (33%), Positives = 287/549 (52%), Gaps = 44/549 (8%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G +TNAA++ SR P+ +AE + +K +SV +A GF+N + S L KI+ Sbjct: 37 GDFATNAALVGSRYAKKPPMQLAESLKDILKQSELFESVQVAKPGFLNFVVRKSTLIKII 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 +IV +Y G+ K+ E+ SANPTGP VGH R V+GD L+++ GY+V Sbjct: 97 ETIVEKD-DYPVEKSGQ-EKIQFEYGSANPTGPFTVGHGRQIVIGDILSNVFKALGYDVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222 RE YINDAG QI LA S++ RY Q L + D+PE Y G YL + K+L ++ + Sbjct: 155 REMYINDAGRQIRLLAKSLWVRYNQVLGVEEIDIPEDGYHGEYLIEIAKKLVEEVEEKFK 214 Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282 + + Y+V +++ ++ DL+ LN DI+ SE D + ++++ L + Sbjct: 215 MKWNNEIEGFFQKYAVDSILADMKSDLRLLNCSFDIYFSEKSLI--DDGTVDEVLEILEK 272 Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQ--LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340 YVY RK L F+ + D+ D+ L++ DG++TYF D+AY Sbjct: 273 NSYVY------------------RKDGALWFKVSEFVDEEDKVLIRKDGTFTYFLTDIAY 314 Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400 K++RGF + + GSDH G+V R++A A+ + +NV+L + V L R ++M Sbjct: 315 HYKKHKRGFSKVYDIWGSDHHGHVPRMKAAMRALGVEDGFLNVILHQFVTLKRGDEIVRM 374 Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460 S R+G+F+TL+ +V+E G+D+ R+ + + FD K+QS +NPV+YVQYA+AR Sbjct: 375 STRSGNFVTLKELVEEAGADATRYFFAMIDPNTHMVFDLNLAKQQSSDNPVYYVQYAHAR 434 Query: 461 CRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 S+F QAK D DL D E LI+ + + +++A Sbjct: 435 ICSLFEQAKAKSVSFEKGKDLDLLN----------DKVETDLILRIDGFEDALKDAARTL 484 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 P KL YL LA FH ++ + V N KL+ RL L +A ++ GL++ Sbjct: 485 SPNKLTQYLEQLAYDFHSFYT------KCLIVDPKNMKLSNARLNLSYAAKLVLKKGLSL 538 Query: 577 IGVESPNEM 585 +GV +P +M Sbjct: 539 LGVNAPEKM 547 >gi|15611371|ref|NP_223022.1| arginyl-tRNA synthetase [Helicobacter pylori J99] gi|7674359|sp|Q9ZMB9|SYR_HELPJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|4154833|gb|AAD05887.1| ARGINYL-TRNA SYNTHETASE [Helicobacter pylori J99] Length = 541 Score = 283 bits (723), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 170/564 (30%), Positives = 289/564 (51%), Gaps = 49/564 (8%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKG 87 ++IE P+D HGH +T A L++ PL IAE + +I F +A KG Sbjct: 16 EVIIEYPKDREHGHYATPIAFNLAKVFKKSPLAIAEELALKIGSHEKTQGFFDRVVACKG 75 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVV 146 +IN LS +L + + ++G + + K+ +EFVSANPTGP+H+GH R AV Sbjct: 76 YINFTLSLDFLERFTQKALELKEQFGSQVKSERSQKIFLEFVSANPTGPLHIGHARGAVF 135 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206 GD+LA + F G+EV EYY+ND G+QI L +SV+ Y++ + PE +Y G Y+ Sbjct: 136 GDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGVSVWLAYKEHVLKESVTYPEVFYKGEYI 195 Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 + K+ + L EE + ++ DY+ M+ I+ +L AL+I D + SE + Sbjct: 196 IEIAKKAHNDLEPSLFKENEETIIEVLSDYAKDLMLLEIKGNLDALDIHFDSYASEKEVF 255 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 + + + D L + +YE SKT +S++ D+ DR L+K Sbjct: 256 KHKDA----VFDRLEKANALYE-----KDSKT-----------WLKSSLYQDESDRVLIK 295 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386 D SYTY A D+ Y K+++ + I + G+DH GY+ R++A + +++ VLL Sbjct: 296 EDKSYTYLAGDIVYHDEKFQQNYTKYINIWGADHHGYIARVKASLEFLGYDSSKLEVLLA 355 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446 ++VRL +D P KMSKRAG+FI ++ V+D+VG D++RF+ L ++ L+FD +K+Q Sbjct: 356 QMVRLLKDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQD 415 Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAE 504 NP++Y+ YA +R ++ ++ F + I Q + E L+ Sbjct: 416 SSNPIYYIHYANSRIHTMLEKSP----------FSKEEILQTPLKNLNAEEKYLLFSALS 465 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQL 562 P+ +E++ K+ Y LAS FH ++ G+ + P+ + + L++ Sbjct: 466 LPKAVESSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL-----------LKI 514 Query: 563 VHAVASIINSGLNIIGVESPNEMS 586 V+ + + ++G+E ++S Sbjct: 515 CLMVSLSLTNAFKLLGIEIKTKIS 538 >gi|17545006|ref|NP_518408.1| arginyl-tRNA synthetase [Ralstonia solanacearum GMI1000] gi|39932229|sp|Q8Y2P8|SYR_RALSO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|17427296|emb|CAD13815.1| probable arginyl-trna synthetase (arginine--trna ligase) (argrs) protein [Ralstonia solanacearum GMI1000] Length = 600 Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 199/601 (33%), Positives = 298/601 (49%), Gaps = 77/601 (12%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87 IV+ERP+ AHG ++ N A+ L++PLG +P +A I I+ D V +V IAG G Sbjct: 30 IVLERPKQAAHGDIACNVALQLAKPLGTNPRELANRIADGIRADARGQRLVSAVEIAGPG 89 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FINL LSP+ +L+++ G YG + G V +EFVSANPTGP+HVGH R A +G Sbjct: 90 FINLRLSPTARTDVLAAVFAEGDRYGAADLHDGAPVLVEFVSANPTGPLHVGHGRQAALG 149 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D LA+L+ + G++V RE+Y NDAG QI+ LA+SV R + D+ PE Y G Y+ Sbjct: 150 DALAALLEWQGHKVHREFYYNDAGVQIHNLAVSVQAR-ARGFKPGDTGWPEAAYNGDYIA 208 Query: 208 HV------GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 + GK + + + + + ++ ++V + DL+A ++ D + Sbjct: 209 DIAADYLAGKTVRASDGEPVTGARDVENIEAIRRFAVTYLRNEQDIDLQAFGVKFDHYYL 268 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E + ++ +D L G YE L R+T GDD D Sbjct: 269 ESSLYA--DGKVQQTVDALIAAGKTYE----------------QEGALWLRTTDDGDDKD 310 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKA 379 R + KSDGSYTYF D+AY K+ RGF +I V GSDH G + R+ A + K Sbjct: 311 RVMRKSDGSYTYFVPDVAYHTTKWGRGFTQVINVQGSDHHGTIARVRAGLQGLDLGIPKG 370 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV-------------VDEV--------- 417 + +L ++V + +DG +K+SKRAG ++T+R + VD + Sbjct: 371 YPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIEWSNGDAESEAGVDTIRACVESGAP 430 Query: 418 --------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF---- 465 G D+VRF +L RK FD +QS ENPV+YVQYA+AR S+F Sbjct: 431 NWPGRFTRGRDAVRFFLLSRKADTEFVFDVDLALKQSDENPVYYVQYAHARICSVFEQWH 490 Query: 466 -RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R+ D DL E + L+ +A +P ++ +A P+ +AFY Sbjct: 491 AREGGDAASLAGADL----AAVAGPEASPQAVALVQRIAAFPDMLADAARELAPHAVAFY 546 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 L DLA FH ++ R V ++ + RL L+ A ++ +GL +IGV +P + Sbjct: 547 LRDLAGDFHAFYNADR-------VLVDDDAVKRARLALLAATRQVLRNGLAVIGVSAPQK 599 Query: 585 M 585 M Sbjct: 600 M 600 >gi|193214239|ref|YP_001995438.1| arginyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110] gi|193087716|gb|ACF12991.1| arginyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110] Length = 552 Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 191/576 (33%), Positives = 300/576 (52%), Gaps = 49/576 (8%) Query: 21 KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80 ++ VE I IE+P D G STN AM L+R L +P IA I++ + + VD Sbjct: 15 ELSVENAEAREIQIEKPADEKFGDASTNVAMTLARELRKNPRQIAADIISNLSLGESVDK 74 Query: 81 VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140 + +AG GFIN Y S Y+ + I+ G ++GR+ +GKG +E+VSANPTGP+ VG Sbjct: 75 IDVAGAGFINFYFSKKYITGAVKEILTEGEDFGRSEVGKGKTAIVEYVSANPTGPLTVGR 134 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R V+GD +A+++ GY+VTREYY N+AG Q+ LA SV +RY + L D PE + Sbjct: 135 GRGGVLGDCIANMLEAQGYDVTREYYFNNAGRQMRILAGSVRFRYLE-LCGEQVDFPEDH 193 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G Y+ + +++ D+ + L E+ L K+++ + + I++ L L I+HD F Sbjct: 194 YQGGYIGDIAQKIYDEKGTSLAG---EEDLSFFKEFAEAEIFESIKNTLGRLGIKHDSFF 250 Query: 261 SEDD-FHRGDPSPIR--DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 +E+ + +G+ R ++++ LA +GY+ + F +T G Sbjct: 251 NENTLYEKGENGKSRNDEVVERLAEKGYI----------------KHEDGATWFLTTKFG 294 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSE 376 + D+ L+KS G +Y D+AY K+ER F M+ V G+DH Y L A+ E Sbjct: 295 LEKDKVLVKSTGEPSYRLPDIAYHITKFERDFSLMVNVFGADHIDEYPDVLRALEVLGYE 354 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K+ ++ V + + V +G +KMS R G+ L ++D+VG+D+ RF + R L+ Sbjct: 355 KE-RVQVAINQFVTTTVNGEVVKMSTRKGNADLLDDLIDDVGADATRFFFIIRNKESHLN 413 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD---- 492 FD K+QS +NPVFY+QYA+AR S+ R A + + DF+ P SE+D Sbjct: 414 FDVDLAKKQSTDNPVFYLQYAHARICSLIRVAGE---ETDFE-------PSASEYDLLDA 463 Query: 493 ---TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549 ELQL L EY +E A EP KL Y+ +A FH + R + Sbjct: 464 LTANEELQLAKILLEYGTALEVCVNALEPQKLIGYMNRVAEAFHKFYQECR-------IV 516 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + RL L A ++ +G ++G+ +P +M Sbjct: 517 SEEESVRKSRLYLCLATRQVLQNGFKVLGISAPEKM 552 >gi|19552403|ref|NP_600405.1| arginyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032] gi|62390067|ref|YP_225469.1| arginyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032] gi|1351171|sp|P35868|SYR_CORGL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|21323946|dbj|BAB98572.1| Arginyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032] gi|41325403|emb|CAF19883.1| ARGINYL-TRNA SYNTHETASE [Corynebacterium glutamicum ATCC 13032] Length = 550 Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 188/583 (32%), Positives = 307/583 (52%), Gaps = 38/583 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD ++ +K E+ +++ +L +++V+ERPR+ HG +TN A+ +++ +G +P Sbjct: 4 ADLATLIKETAVEVLTSRELDTSVLPEQVVVERPRNPEHGDYATNIALQVAKKVGQNPRD 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + D +DS IAG GF+N+ L+ + +I++ I+ G +G + V Sbjct: 64 LATWLAEALAADDAIDSAEIAGPGFLNIRLAAAAQGEIVAKILAQGETFGNSDHLSHLDV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++ SG +VTREYY ND G QI+ ALS+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAKVTREYYFNDHGRQIDRFALSLLA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+K + + + +K+ E L + + V+ M + Sbjct: 184 AAK------GEPTPEDGYGGEYIKEIAEAIVEKHP-EALALEPAATQELFRAEGVEMMFE 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L D++ E+ + + + L G +YE Sbjct: 237 HIKSSLHEFGTDFDVYYHENSLF--ESGAVDKAVQVLKDNGNLYE--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 + RST GDD DR ++KSDG Y A D+AY K+ RG + IY++G+DH GY Sbjct: 280 -NEGAWWLRSTEFGDDKDRVVIKSDGDAAYIAGDIAYVADKFSRGHNLNIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA+ K + VL+ ++V L RDG ++MSKRAG +TL +V+ +G D+ R Sbjct: 339 IARLKAAAAALGYKPEGVEVLIGQMVNLLRDGKAVRMSKRAGTVVTLDDLVEAIGIDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPR 482 + ++ LD D + QS +NPV+YVQY +AR SI R+A+ + + DL Sbjct: 399 YSLIRSSVDSSLDIDLGLWESQSSDNPVYYVQYGHARLCSIARKAETLGVTEEGADL--- 455 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 +++ + E D LI L E+P V++ A +EP+++A Y +LA FH + Sbjct: 456 SLLTHDREGD-----LIRTLGEFPAVVKAAADLREPHRIARYAEELAGTFHRFYDSCHIL 510 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P+ V + + RL L A + + L+++GV +P +M Sbjct: 511 PK---VDEDTAPIHTARLALAAATRQTLANALHLVGVSAPEKM 550 >gi|313139480|ref|ZP_07801673.1| arginyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171] gi|313131990|gb|EFR49607.1| arginyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171] Length = 613 Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 185/597 (30%), Positives = 306/597 (51%), Gaps = 76/597 (12%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 + + RP+D A G ++NAAM L++ G+ P +AEL R+ + +V +AG GFIN Sbjct: 51 KFAVMRPKDRARGDWASNAAMQLAKKAGMKPRDLAELFAERLTAADGISTVEVAGPGFIN 110 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + L + ++ ++ G YG+N G +N+EFVSANPTGP+H+G R A VGD++ Sbjct: 111 ITLDSASAAAVVDKVLADGAGYGKNAHLGGKTLNLEFVSANPTGPIHIGGTRWASVGDSM 170 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A ++ +G +V REYY ND G QIN A S+ A + ++ P Y G Y+ + Sbjct: 171 ARVLEANGAKVVREYYFNDHGEQINRFAKSLV----AAAHGEET--PIDGYKGKYINEIA 224 Query: 211 KEL---ADKYSSELLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDLKA 251 + A+ ++L+ P ++ P+ + S Q M I+ +K Sbjct: 225 DRVIAEAEADGVDVLSLPRVDGGLDKDGNPLGEGDSEQREEFRKRAVPMMFDEIQRSMKE 284 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 ++ D++ E++ ++ + I+ L +G ++E K T F Sbjct: 285 FRVRFDVWFHENNLYK--DGEVDRAIEELRSRGDIFE------KDGAT----------WF 326 Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKRLE 368 ST GDD DR ++KS+G + YFAAD+AY+ K R D IY++G+DH GY+ R+ Sbjct: 327 ESTKHGDDKDRVIIKSNGDFAYFAADIAYYWNKRHRAVDPADVAIYMLGADHHGYIGRMM 386 Query: 369 AVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 A+ AA E + +L+ +LV + ++G P++MSKRAG+ +T+ +V+ VG D+ R+ + Sbjct: 387 AMCAAFGDEPGVNMQILIGQLVNVMKNGKPVRMSKRAGNVVTIDDLVEAVGVDAARYSLA 446 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLFPRNV 484 + +D D + S ENPV+YVQYA+AR ++ R A D L Sbjct: 447 RTDYNTSVDIDLDLLTSHSNENPVYYVQYAHARSCNVDRNAAAAGIGTEGADLSLL---- 502 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR---- 540 ++E D +++ LA++P + A + P+K+A YL DLA +H ++ R Sbjct: 503 ---DTEADG---EVLAALAQWPATLALAGDQRAPHKVAHYLEDLAGAYHKWYNVERVVPM 556 Query: 541 --ENPRLRFVQANNRKLTM----------MRLQLVHAVASIINSGLNIIGVESPNEM 585 +P R A L + RL+L AV ++I SGL+++GV +P++M Sbjct: 557 ALTDPEERLDDAAREALRIAKNPEPARAAARLKLNDAVRTVIASGLDLLGVTAPDKM 613 >gi|224419223|ref|ZP_03657229.1| arginyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] gi|253826941|ref|ZP_04869826.1| arginyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] gi|313142726|ref|ZP_07804919.1| arginyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] gi|253510347|gb|EES89006.1| arginyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] gi|313131757|gb|EFR49374.1| arginyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491] Length = 521 Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 169/565 (29%), Positives = 295/565 (52%), Gaps = 54/565 (9%) Query: 26 KKILDRI-----VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80 KKI+D V+E+PRD GH + ++ P IA+ +++ P++ S Sbjct: 6 KKIVDETLGITSVLEQPRDKKFGHFAL-PTFSFAKSFKKSPQDIAQDFAKKLESLPEISS 64 Query: 81 VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140 + + G G++N +LS +L + + + +N G K+ +E+VSANPTGP+H+GH Sbjct: 65 LNVVG-GYVNFFLSDLFLEQCTQDFLKP---HQKN----GEKILLEYVSANPTGPLHIGH 116 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R A++GD+L + GY +T EYYINDAG+QI L S+++ + +++ DLPEG Sbjct: 117 ARGAILGDSLCRIGRHLGYSITTEYYINDAGSQIENLGKSIYYAGRHLFFDDSYDLPEGC 176 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G Y+ + KE D + E F EK++ + + M++ I+ +L I D F+ Sbjct: 177 YKGEYILDLAKEAKDCFGIEC--FENEKFIEKLSLFGKDKMLEEIKSNLAEAGIVFDNFV 234 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE + ++ ++ +L +Y+ ++ +ST GD+ Sbjct: 235 SEKELYKQWDGTLK----SLESHNGIYK----------------QEGKIWIKSTEFGDEK 274 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 +R +++ +G TY A D+ Y K K+ER FD I + G+DH GY++R++A + Q Sbjct: 275 NRVVVRENGEPTYLAGDIIYHKNKFERKFDRYINIWGADHHGYIQRVKAAIEFLGYDSNQ 334 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + +LL ++V L + G KMSKRAG+FI ++ ++++VGSD++R + L ++ L+FD Sbjct: 335 LEILLSQMVALLKGGESYKMSKRAGNFILMKDIIEDVGSDALRLIFLSKRADTHLEFDIE 394 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500 +K+Q NPV+Y+ YA+AR ++F ++ L D S S L+V Sbjct: 395 DLKKQDSSNPVYYINYAHARIHTLFSKSNYTLETLQKDF---------SNLSESLRDLLV 445 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 + +E++ I + P K+ YL L+S FH ++ + + N K + L Sbjct: 446 LALNLSKTLEDSFIQRNPQKVVEYLRTLSSEFHRFYNEE------KILNTPNEKTILSVL 499 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 + VA +N+GL+++GV++ M Sbjct: 500 SM---VAQSLNAGLDLLGVKAKKSM 521 >gi|307728283|ref|YP_003905507.1| arginyl-tRNA synthetase [Burkholderia sp. CCGE1003] gi|307582818|gb|ADN56216.1| arginyl-tRNA synthetase [Burkholderia sp. CCGE1003] Length = 600 Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 190/591 (32%), Positives = 302/591 (51%), Gaps = 64/591 (10%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87 I +ERP+ AHG ++ N AM L++PL +P +A+ IV + P ++S +AG G Sbjct: 37 IALERPKVAAHGDVACNVAMQLAKPLRANPRQLAQQIVDTLLAQPQAQGLIESAEVAGPG 96 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FINL L+ + + ++++++ YGR+ G V IEFVSANPTGP+HVGH R A +G Sbjct: 97 FINLRLAAAAKQAVVAAVLAEKDAYGRSQRDAGKHVLIEFVSANPTGPLHVGHGRQAALG 156 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D L++++A G++V RE+Y NDAG QI TLALS R + L D+ P Y G Y+ Sbjct: 157 DALSNVLASQGWDVHREFYYNDAGVQIGTLALSTQAR-ARGLAPGDAGWPASAYNGEYIA 215 Query: 208 HVGKELADKYS------SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 + K+ + + + + + L ++ ++V + + DL+A ++ D + Sbjct: 216 DIAKDYLNGVTVCASDGEPVTGARDVENLDAIRRFAVAYLRREQDMDLQAFGVKFDQYYL 275 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E + + ++ L G YE L R+T GDD D Sbjct: 276 ESSLYT--EGRVEKTVEALIAAGKTYE----------------QEGALWLRTTDDGDDKD 317 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVSEKKA 379 R + KSDG+YTYF D+AY K+ERGF +I + GSDH G + R+ A + K Sbjct: 318 RVMRKSDGTYTYFVPDVAYHVAKWERGFTKVINIQGSDHHGTIARVRAGLQGLGIGIPKG 377 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS-------------------- 419 + +L ++V + R+G +K+SKRAG ++T+R +++ G Sbjct: 378 YPDYILHKMVTVMRNGEEVKISKRAGSYVTVRDLIEWSGGATPGSEAAVDLIDEETIRRG 437 Query: 420 -DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF-PDLDF 477 D+VRF ++ RK FD +Q+ ENPV YVQYA+AR S+ + K + D Sbjct: 438 RDAVRFFLISRKADTEFVFDIDLALKQNDENPVHYVQYAHARICSVIAECKSRYGADYGA 497 Query: 478 D---LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 D L ++ P SE + L+ LAE+P ++++A P+ +AFYL DLA FH Sbjct: 498 DESALANVDLAPLSSE---RAMALLNKLAEFPDMLQHAADELAPHAVAFYLRDLAGEFHS 554 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + N + V ++ R+ L+ A ++ +GL +IGV +P +M Sbjct: 555 FY-----NDKAERVLVDDAAERNARVALLAATRQVLANGLAVIGVSAPVKM 600 >gi|313681372|ref|YP_004059110.1| arginyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994] gi|313154232|gb|ADR32910.1| arginyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994] Length = 526 Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 168/503 (33%), Positives = 279/503 (55%), Gaps = 37/503 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +++E+P+D + GH +T A L++ L P+ IAE I D + S + +G+IN Sbjct: 17 VILEKPKDRSFGHFATPIAFSLAKELRKSPMLIAEEIAGSFA-DESMFSAVESVQGYINF 75 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 LS ++L + S + G E+G + KGT + +EFVSANPTGP+H+GH R AV GDT+ Sbjct: 76 RLSEAFLDEYASWALSHGDEFGSS-DKKGT-ILLEFVSANPTGPLHIGHARGAVYGDTML 133 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 L GY++T EYY+NDAG QI+ L +S+ + +L + PE YY G YL + + Sbjct: 134 RLGRHLGYDITAEYYVNDAGNQIDLLGVSLQLEGRSSLLGESVEWPEKYYRGEYLSDLAR 193 Query: 212 ELADKYSSELL-NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 E+ + + E L + +K L + ++ ++ +I DDL A+N+ D F+ E + Sbjct: 194 EVVELFGEEALRDESRQKELAL---WAKDKILALIVDDLAAINVHFDTFVGEASLY---- 246 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 S ++ + YV EG + RS+ +GDD DR +++ DG Sbjct: 247 SEWDRVMAKMGEGVYVNEG------------------KTFIRSSDLGDDHDRVVVREDGR 288 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TY A D+ Y K+ERG+D+ I + G+DH GY+ R++A + +++ VLL ++V Sbjct: 289 PTYLAGDIIYHNQKFERGYDDYINIWGADHHGYIARVKAAITFLGYDSSKLEVLLSQMVS 348 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L +DG P KMSKRAG I + VV+E+G++++RFM +K L+FD ++K Q NP Sbjct: 349 LLKDGEPFKMSKRAGTVILMSDVVEEIGAEALRFMFASKKCDTALEFDIEELKRQDSSNP 408 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 ++Y+QYA+AR +++ +++ ++D ++ ++ S+ D L+ P +I+ Sbjct: 409 IYYIQYAHARIQTLISKSE---KNMD-EIMGSHLYGLSSDADG----LLFEALLLPEIID 460 Query: 511 NATIAQEPYKLAFYLYDLASVFH 533 +A +++ KL YL LA H Sbjct: 461 DAFESRQAQKLPDYLKVLAGRLH 483 >gi|261885571|ref|ZP_06009610.1| arginyl-tRNA synthetase [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 531 Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 173/561 (30%), Positives = 299/561 (53%), Gaps = 44/561 (7%) Query: 27 KILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85 ++L R ++E+P+D H +T A L++ P IA + + + D I Sbjct: 11 RVLGRDFILEKPKDKNLAHYATPFAFSLAKEFKKSPAIIASQLALKFENHELFDVFSI-- 68 Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 G++N L +L + ++ + +G + IE++SANPTGP+H+GH R AV Sbjct: 69 NGYLNFKLKGEFLNSLANNALSLAESFGSKKPQSQKDIFIEYISANPTGPLHIGHVRGAV 128 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205 GDTLA + + G +V EYYINDAG QI+ L +S+ ++AL+N + P+ YY G Y Sbjct: 129 YGDTLARVARYIGLDVFTEYYINDAGNQIDLLGISISLFAREALFNENVQYPDKYYRGEY 188 Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 ++ + K K+ ++ + E + L + ++ ++KII+ DL+ + I + + SE Sbjct: 189 IEDIAKLALGKFGKDIF-YDESRNLELA-EFGKDEVLKIIKKDLQDVGIFIESWASEKSL 246 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 + + I LA G +YE K +TT STM+GDD DR ++ Sbjct: 247 Y----DELEGTIKKLASSGQMYE------KDQTT----------YIASTMLGDDSDRVVI 286 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 +SDG TY A D+ Y K+++G+ + I + G+DH GY+ R++A + ++++ V+L Sbjct: 287 RSDGRPTYLAGDIVYHDAKFKKGYKHYINIWGADHHGYIARIKAAINFLGYDESRLEVIL 346 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 ++V L ++G P KMSKRAG + + ++ E+GSD++RF+ + + N+ L+FD ++K++ Sbjct: 347 MQMVSLLKEGKPFKMSKRAGTSVLMSDILSEIGSDALRFIFISKANTSSLEFDIDELKKE 406 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE-SEFDTSELQLIVHLAE 504 NP+FY+ YA+AR +F +A + P +V+ + S D S L+ Sbjct: 407 DSSNPIFYINYAHARVNQVFAKASKL---------PNDVVGADLSNLDESGKNLLFEALI 457 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 P V+E+A ++ +K+ YL L++ FH ++ EN R V + N L+L Sbjct: 458 LPEVLEDAVTSRSLHKIPEYLKSLSASFHKFYN---EN---RVVGSKNED---ELLKLFS 508 Query: 565 AVASIINSGLNIIGVESPNEM 585 VA I LN+IG+ + ++M Sbjct: 509 VVALSIKVALNLIGIIAKDKM 529 >gi|317013765|gb|ADU81201.1| arginyl-tRNA synthetase [Helicobacter pylori Gambia94/24] Length = 541 Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 166/564 (29%), Positives = 289/564 (51%), Gaps = 49/564 (8%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKG 87 ++IE P+D HGH +T A L++ PL IAE + +I + F +A KG Sbjct: 16 EVIIEYPKDREHGHYATPIAFNLAKVFKKSPLAIAEELALKISSHKKIQGFFDRVVACKG 75 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVV 146 +IN LS +L + + ++G + + K+ +EFVSANPTGP+H+GH R AV Sbjct: 76 YINFTLSLDFLERFTQKALELKEKFGSQVKSERSQKIFLEFVSANPTGPLHIGHARGAVF 135 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206 GD+LA + F G+EV EYY+ND G+QI L +SV+ Y++ + PE +Y G Y+ Sbjct: 136 GDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGISVWLAYKEHVLKESVTYPEVFYKGEYI 195 Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 + K+ ++ L EE + ++ Y+ M+ I+D+L AL I D + SE + Sbjct: 196 IEIAKKASNDLEPSLFKGNEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREIF 255 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 + + + + L + +YE ++ +S++ D+ DR L+K Sbjct: 256 KCKDA----VFERLKKANALYE----------------KDSKIWLKSSLYQDESDRVLIK 295 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386 D SYTY A D+ Y K+++ + I + G+DH GY+ R++A + +++ VLL Sbjct: 296 EDKSYTYLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSSKLEVLLA 355 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446 ++VRL +D P KMSKRAG+FI ++ V+D+VG D++RF+ L ++ L+FD +K+Q Sbjct: 356 QMVRLLKDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQD 415 Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAE 504 NP++Y+ YA +R ++ ++ F + I Q + E L+ Sbjct: 416 SSNPIYYIHYANSRIHTMLEKSP----------FSKEEIWQTPLKNLNAEEKYLLFSALS 465 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQL 562 P+ +E++ K+ Y LAS FH ++ G+ + P+ + + L++ Sbjct: 466 LPKAVESSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL-----------LKI 514 Query: 563 VHAVASIINSGLNIIGVESPNEMS 586 V+ + + ++G+E ++S Sbjct: 515 CLMVSLSLTNAFKLLGIEIKTKIS 538 >gi|317008966|gb|ADU79546.1| arginyl-tRNA synthetase [Helicobacter pylori India7] Length = 541 Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 170/564 (30%), Positives = 287/564 (50%), Gaps = 49/564 (8%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKG 87 ++IE P+D HGH +T A L++ PL IAE + +I +F +A KG Sbjct: 16 EVIIEYPKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKG 75 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVV 146 +IN LS +L + + ++G + K+ +EFVSANPTGP+H+GH R AV Sbjct: 76 YINFTLSLDFLERSTQKALELKEQFGSQPKSERSQKIFLEFVSANPTGPLHIGHARGAVF 135 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206 GD+LA + F G+EV EYY+ND G+QI L LSV+ Y++ + PE +Y G Y+ Sbjct: 136 GDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYI 195 Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 + K+ + L EE + ++ Y+ M+ I+D+L AL I D + SE + Sbjct: 196 IEIAKKADNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEKEVF 255 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 + + + + L + +YE ++ +S++ D+ DR L+K Sbjct: 256 KHKDA----VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIK 295 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386 D SYTY A D+ Y K+++ + I + G+DH GY+ R++A + ++ VLL Sbjct: 296 EDKSYTYLAGDIVYHDEKFKQNYTQYINIWGADHHGYIARVKASLEFLGHDSNKLEVLLA 355 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446 ++VRL +D P KMSKRAG+FI ++ VVD+VG D++RF+ L ++ L+FD +K+Q Sbjct: 356 QMVRLLKDNEPYKMSKRAGNFILIKDVVDDVGRDALRFIFLSKRLDTHLEFDVNTLKKQD 415 Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAE 504 NP++Y+ YA +R ++ ++ F + I Q S + E L+ Sbjct: 416 SSNPIYYIHYANSRIHTMLEKSP----------FSKEEILQTPLSNLNAEEKYLLFSALS 465 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQL 562 P+ IE++ K+ Y LAS FH ++ G+ P+ + + L++ Sbjct: 466 LPKAIESSFEEYGLQKMCEYAKTLASEFHRFYNAGKILNTPKAKEL-----------LKI 514 Query: 563 VHAVASIINSGLNIIGVESPNEMS 586 V+ +++ ++G+E ++S Sbjct: 515 CLMVSLSLSNAFKLLGIEIKTKIS 538 >gi|224282334|ref|ZP_03645656.1| arginyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171] Length = 598 Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 185/597 (30%), Positives = 306/597 (51%), Gaps = 76/597 (12%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 + + RP+D A G ++NAAM L++ G+ P +AEL R+ + +V +AG GFIN Sbjct: 36 KFAVMRPKDRARGDWASNAAMQLAKKAGMKPRDLAELFAERLTAADGISTVEVAGPGFIN 95 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + L + ++ ++ G YG+N G +N+EFVSANPTGP+H+G R A VGD++ Sbjct: 96 ITLDSASAAAVVDKVLADGAGYGKNAHLGGKTLNLEFVSANPTGPIHIGGTRWASVGDSM 155 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A ++ +G +V REYY ND G QIN A S+ A + ++ P Y G Y+ + Sbjct: 156 ARVLEANGAKVVREYYFNDHGEQINRFAKSLV----AAAHGEET--PIDGYKGKYINEIA 209 Query: 211 KEL---ADKYSSELLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDLKA 251 + A+ ++L+ P ++ P+ + S Q M I+ +K Sbjct: 210 DRVIAEAEADGVDVLSLPRVDGGLDKDGNPLGEGDSEQREEFRKRAVPMMFDEIQRSMKE 269 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 ++ D++ E++ ++ + I+ L +G ++E K T F Sbjct: 270 FRVRFDVWFHENNLYK--DGEVDRAIEELRSRGDIFE------KDGAT----------WF 311 Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKRLE 368 ST GDD DR ++KS+G + YFAAD+AY+ K R D IY++G+DH GY+ R+ Sbjct: 312 ESTKHGDDKDRVIIKSNGDFAYFAADIAYYWNKRHRAVDPADVAIYMLGADHHGYIGRMM 371 Query: 369 AVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 A+ AA E + +L+ +LV + ++G P++MSKRAG+ +T+ +V+ VG D+ R+ + Sbjct: 372 AMCAAFGDEPGVNMQILIGQLVNVMKNGKPVRMSKRAGNVVTIDDLVEAVGVDAARYSLA 431 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLFPRNV 484 + +D D + S ENPV+YVQYA+AR ++ R A D L Sbjct: 432 RTDYNTSVDIDLDLLTSHSNENPVYYVQYAHARSCNVDRNAAAAGIGTEGADLSLL---- 487 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR---- 540 ++E D +++ LA++P + A + P+K+A YL DLA +H ++ R Sbjct: 488 ---DTEADG---EVLAALAQWPATLALAGDQRAPHKVAHYLEDLAGAYHKWYNVERVVPM 541 Query: 541 --ENPRLRFVQANNRKLTM----------MRLQLVHAVASIINSGLNIIGVESPNEM 585 +P R A L + RL+L AV ++I SGL+++GV +P++M Sbjct: 542 ALTDPEERLDDAAREALRIAKNPEPARAAARLKLNDAVRTVIASGLDLLGVTAPDKM 598 >gi|187479831|ref|YP_787856.1| arginyl-tRNA synthetase [Bordetella avium 197N] gi|109894974|sp|Q2KTN9|SYR_BORA1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|115424418|emb|CAJ50971.1| arginyl-tRNA synthetase [Bordetella avium 197N] Length = 561 Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 187/568 (32%), Positives = 295/568 (51%), Gaps = 48/568 (8%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87 I++ERP+ AHG ++TN AM L++P +P +A+ IV + DP VDS IAG G Sbjct: 28 ILLERPKVAAHGDVATNVAMQLAKPAKRNPRELAQGIVDALLADPQARAIVDSAEIAGPG 87 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FINL + + +++++ G +GR + KV +EFVSANPTGP+HVGH R A +G Sbjct: 88 FINLRFTAQARQAVVAAVSAQGAAFGRA-ARRDEKVLVEFVSANPTGPLHVGHARQAALG 146 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D + L SG++VTRE+Y NDAG QI LA+SV R + + + + P Y G Y+ Sbjct: 147 DAICRLFDASGWDVTREFYYNDAGNQIQNLAISVQAR-ARGIGPDAPEWPADGYKGDYIA 205 Query: 208 HVGKELADKYSSELLNFPEEKW------LPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 + ++ + S + + + L ++ ++V + + DL+A ++ D F Sbjct: 206 DIARDYLAQASVQAADGEPVQASGNIDDLEDIRAFAVAYLRREQDLDLQAFGLKFDNFFL 265 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV--GDD 319 E + + ++ L +G+ YE L R+T + GDD Sbjct: 266 ESSLY--TSGRVERTVETLIAKGHTYE----------------QDGALWLRTTELGTGDD 307 Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK-- 377 DR + KS+G YTYF D+AY K+ERGF + I + GSDH G V R+ A + E Sbjct: 308 KDRVMRKSEGGYTYFVPDVAYHLAKWERGFHHAINIQGSDHHGTVARVRAGLQGLEEGIP 367 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437 K +L ++V++ R G +K+SKRAG ++T+R +++ VG D+VR+ ++ R+ F Sbjct: 368 KEFPAYVLHKMVKVMRGGEEVKISKRAGSYVTMRDLIEWVGRDAVRYFLIQRRADTEFVF 427 Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497 D +S ENPV+Y+QYA+AR S+ + + R P SE Sbjct: 428 DIDLALSKSDENPVYYIQYAHARICSMIASSGLDDATIAAADAARLTAP-------SEFA 480 Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557 L+ LAE+P V++ A P+ +AF+L D AS FHG ++ R V ++ L Sbjct: 481 LMQRLAEFPNVVKLAAQELAPHHIAFWLRDCASDFHGWYNAER-------VLVDDEGLKQ 533 Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585 RL+L ++ +GL ++GV + M Sbjct: 534 ARLRLAATTRQVLANGLALLGVTALERM 561 >gi|433534|emb|CAA79710.1| arginyl-tRNA synthetase [Corynebacterium glutamicum] Length = 550 Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 187/583 (32%), Positives = 305/583 (52%), Gaps = 38/583 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD ++ +K E+ +++ +L +++V+ERPR+ HG +TN A+ +++ +G +P Sbjct: 4 ADLATLIKETAVEVLTSRELDTSVLPEQVVVERPRNPEHGDYATNIALQVAKKVGQNPRD 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + D +DS IAG GF+N+ L+ + +I++ I+ G +G + V Sbjct: 64 LATWLAEALAADDAIDSAEIAGPGFLNIRLAAAAQGEIVAKILAQGETFGNSDHLSHLDV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++ SG +VTREYY ND G QI+ ALS+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAKVTREYYFNDHGRQIDRFALSLLA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+K + + + +K+ E L + + V+ M + Sbjct: 184 AAK------GEPTPEDGYGGEYIKEIAEAIVEKHP-EALALEPAATQELFRAEGVEMMFE 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L D++ E+ + + + L G +YE Sbjct: 237 HIKSSLHEFGTDFDVYYHENSLF--ESGAVDKAVQVLKDNGNLYE--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 + RST GDD DR ++KSDG Y A D+AY K+ RG + IY++G+DH GY Sbjct: 280 -NEGAWWLRSTEFGDDKDRVVIKSDGDAAYIAGDIAYVADKFSRGHNLNIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA+ K + VL+ ++V L RDG ++MSKRAG +TL +V+ +G D+ R Sbjct: 339 IARLKAAAAALGYKPEDVEVLIGQMVNLLRDGKAVRMSKRAGTVVTLDDLVEAIGIDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPR 482 + ++ LD D + QS +NPV+YVQY +AR SI R+A+ + + DL Sbjct: 399 YSLIRSSVDSSLDMDLGLWESQSSDNPVYYVQYGHARLCSIARKAETLGVTEEGADL--- 455 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 +++ + E D LI L E+P V++ A +EP+++A Y +LA FH + Sbjct: 456 SLLTHDREGD-----LIRTLGEFPAVVKAAADLREPHRIARYAEELAGTFHRFYDSCHIL 510 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P+ + + RL L A + + L ++GV +P +M Sbjct: 511 PK---ADEDTAPIHTARLALAAATRQTLANALRLVGVSAPEKM 550 >gi|152991237|ref|YP_001356959.1| arginyl-tRNA synthetase [Nitratiruptor sp. SB155-2] gi|166232815|sp|A6Q543|SYR_NITSB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|151423098|dbj|BAF70602.1| arginyl-tRNA synthetase [Nitratiruptor sp. SB155-2] Length = 527 Score = 280 bits (717), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 180/555 (32%), Positives = 299/555 (53%), Gaps = 45/555 (8%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I++E+PRD GH +T A L++ L P+ IA+ + + + V KG++N Sbjct: 17 IILEKPRDRQFGHYATPIAFSLAKELRRSPMQIADELAKSFESSSIFEKVEPI-KGYVNF 75 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 LS S+L + + + + E+G++ +G + +EFVSANPTGP+H+GH R AV+G+ L+ Sbjct: 76 KLSESFLDEYATWALKNESEFGKD--EQGETILLEFVSANPTGPLHIGHARGAVLGEALS 133 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 L G E+ +EYYINDAG QI L LS++ ++ L + P+ YY G Y+K + K Sbjct: 134 RLGKHLGNEIVKEYYINDAGNQIYLLGLSIYLAAKEEL-GQEVQWPQEYYRGDYIKDLAK 192 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 E +++ E F +E + + ++ + MM++I +L A++I+ D F+SE + Sbjct: 193 EAIEEFGKE--AFSDESLIDKLSEWGKEKMMELIVSNLAAVDIKFDHFVSEKALYE---- 246 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 ++ L VYE ++ +S+ GD+ DR +++ DG Sbjct: 247 KWDEVFAILKEHDAVYE----------------KDSKVWLKSSEYGDEKDRVVVREDGRP 290 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 TY A D+ Y K++RGFD I + G+DH GY+ R++A + ++ VLL ++V L Sbjct: 291 TYLAGDIIYHYDKFKRGFDRYINIWGADHHGYIARVKAAIKFLGFDPDKLEVLLAQMVSL 350 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 + G P KMSKRAG+FI + VV+E+G+D+++FM L +K L+FD +K++ NPV Sbjct: 351 LKGGEPYKMSKRAGNFILMSEVVEEIGADALKFMFLSKKADTHLEFDVDMLKKEDASNPV 410 Query: 452 FYVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 +Y+ YA+AR S+ +A K +D L N ++ F+ LI+ P +IE Sbjct: 411 YYINYAHARINSVLEKAGKSAGEVIDTPLKDLNEDAKDLLFEA----LIL-----PEIIE 461 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A +E +L YL LA+ FH ++ + V + + ++L LV VA I Sbjct: 462 DAFAKRELQRLTDYLKALAAQFHSFYNKHK-------VIGSEYEDRYLKLFLV--VALSI 512 Query: 571 NSGLNIIGVESPNEM 585 GL ++G+E+ M Sbjct: 513 RVGLRLLGIEAKKRM 527 >gi|78188054|ref|YP_378392.1| arginyl-tRNA synthetase [Chlorobium chlorochromatii CaD3] gi|109894980|sp|Q3ANY2|SYR_CHLCH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|78170253|gb|ABB27349.1| arginyl-tRNA synthetase [Chlorobium chlorochromatii CaD3] Length = 552 Score = 280 bits (717), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 188/562 (33%), Positives = 299/562 (53%), Gaps = 41/562 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90 I +E+P D G STN AM+ ++ G P +A+ I+ + PD V + IAG GFIN Sbjct: 24 IQLEQPADKKFGDFSTNIAMLAAKECGKKPRDLAQEIINHLAFPPDTVAKIEIAGAGFIN 83 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL+P ++ + + ++ G ++G++ G G K +E+VSANPTGP+ +G R VVGD + Sbjct: 84 FYLTPRFIMRSVEQVLRDGEKFGQSTEGNGKKAIVEYVSANPTGPLTIGRGRGGVVGDCI 143 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+L+A GYEVTREYY NDAG Q+ L SV +RY + L N + PE +Y G Y++ + Sbjct: 144 ANLLATQGYEVTREYYFNDAGRQMQILGASVRFRYLE-LCGNTIEFPEDHYQGDYIRDIA 202 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD- 269 L +++ + L + + L K + + + K I+ L+ LNI+HD F +E + + Sbjct: 203 ATLYEQHGNAL---EKSEELEPFKKAAEELIFKSIKATLERLNIRHDSFFNEHKLYLANN 259 Query: 270 --PSPIRDIIDNLARQGYV--YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 PS +I +L+ ++ Y+G F +T +G + D+ L+ Sbjct: 260 NSPSANTAVIQSLSSSNFIDDYDG------------------ATWFLTTKLGQEKDKVLI 301 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVL 384 KS G +Y D+AY K++RGFD M+ V G+DH Y LEA+ + +++V Sbjct: 302 KSTGEPSYRLPDIAYHVNKFQRGFDLMVNVFGADHIDEYPDVLEAL-KILGYDTTKVHVA 360 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 + + V +G +KMS R G+ L ++ +VG+D+ R + R L+FD K Sbjct: 361 INQFVTTTVNGQTVKMSTRKGNADLLDDLIADVGADATRLFFITRSKDSHLNFDVELAKR 420 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLA 503 QSKENPVFY+QYA+AR S+ R AK ++ FD D +E+QL L Sbjct: 421 QSKENPVFYLQYAHARICSLLRLAKQ---EVGFDADTYGFADVLQVLDGAAEVQLGFALL 477 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 +P +I+++ EP K+ YL+ LA FH + +E+P L+ ++ RL L Sbjct: 478 NFPAMIQSSLRLLEPQKMVEYLHALAEHFHRFY---QESPILK----AEPEVRTARLLLS 530 Query: 564 HAVASIINSGLNIIGVESPNEM 585 A ++ +G I+G+ +P M Sbjct: 531 VATRQVLRNGFTILGISAPEAM 552 >gi|145295319|ref|YP_001138140.1| arginyl-tRNA synthetase [Corynebacterium glutamicum R] gi|166232781|sp|A4QDE1|SYR_CORGB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|140845239|dbj|BAF54238.1| hypothetical protein [Corynebacterium glutamicum R] Length = 550 Score = 280 bits (717), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 187/583 (32%), Positives = 306/583 (52%), Gaps = 38/583 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD ++ +K E+ +++ +L +++V+ERPR+ HG +TN A+ +++ +G +P Sbjct: 4 ADLATLIKETAVEVLTSRELDTSVLPEQVVVERPRNPEHGDYATNIALQVAKKVGQNPRD 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + D +DS IAG GF+N+ L+ + +I++ I+ G +G + V Sbjct: 64 LATWLAEALAADDAIDSAEIAGPGFLNIRLAAAAQGEIVAKILAQGETFGNSDHLSHLDV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++ SG +VTREYY ND G QI+ ALS+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAKVTREYYFNDHGRQIDRFALSLLA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+K + + + +K+ E L + + V+ M + Sbjct: 184 AAK------GEPTPEDGYGGEYIKEIAEAIVEKHP-EALALEPAATQELFRAEGVEMMFE 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L D++ E+ + + + L G +YE Sbjct: 237 HIKSSLHEFGTDFDVYYHENSLF--ESGAVDKAVQVLKDNGNLYE--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 + RST GDD DR ++KSDG Y A D+AY K+ RG + IY++G+DH GY Sbjct: 280 -NEGAWWLRSTEFGDDKDRVVIKSDGDAAYIAGDIAYVADKFSRGHNLNIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA+ K + VL+ ++V L RDG ++MSKRAG +TL +V+ +G D+ R Sbjct: 339 IARLKAAAAALGYKPEGVEVLIGQMVNLLRDGKAVRMSKRAGTVVTLDDLVEAIGIDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPR 482 + ++ LD D + QS +NPV+YVQY +AR SI R+A+ + + DL Sbjct: 399 YSLIRSSVDSSLDIDLGLWESQSSDNPVYYVQYGHARLCSIARKAETLGVTEEGADL--- 455 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 +++ + E D LI L E+P V++ A +EP+++A Y +LA FH + Sbjct: 456 SLLTHDREGD-----LIRTLGEFPAVVKAAADLREPHRIARYAEELAGTFHRFYDSCHIL 510 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P+ + + RL L A + + L+++GV +P +M Sbjct: 511 PK---ADEDTAPIHSARLALAAATRQTLANALHLVGVSAPEKM 550 >gi|319942151|ref|ZP_08016469.1| arginyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B] gi|319804361|gb|EFW01245.1| arginyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B] Length = 586 Score = 280 bits (716), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 181/537 (33%), Positives = 278/537 (51%), Gaps = 57/537 (10%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKGFI 89 +E+P+D HG ++ AM L+R L +P IAE +VA +K D +++V IAG GFI Sbjct: 29 LEKPKDPTHGDVACTVAMQLARRLKQNPRAIAETLVAEMKADEAFATLLETVEIAGPGFI 88 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N ++ + I+S ++ G ++GR+ G V +E+VSANPTGP+H+GH R +GD Sbjct: 89 NFRVAQNARAAIVSQVLQEGEKFGRSNEFAGKSVLLEYVSANPTGPLHLGHARQGALGDV 148 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 LA+L+ G++V+RE+Y NDAG QI LA+SV R +Q L +LPE Y G Y+ + Sbjct: 149 LANLLDSQGWKVSREFYYNDAGVQIGNLAMSVQVRCRQ-LQGESLELPENAYHGEYIVSI 207 Query: 210 GKELADK-----YSSELLNFPEEKW-LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 ++ DK + E + + +++ YSV + DDL AL ++ D F E Sbjct: 208 ARDFLDKKPVIPHGGEPIESTGDYGDTDLIRRYSVAYLRNEQDDDLSALGVRFDNFFLES 267 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM-------V 316 + ++ + + GY YE L R+T + Sbjct: 268 SLYT--TGAVQKTVQAIIDAGYTYEA----------------DNALWLRTTAFEDLGNGL 309 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 DD DR + KSDG+YTYF D+AY K+ RG+ + + G+DH G + R+ A A S+ Sbjct: 310 RDDKDRVMKKSDGTYTYFVPDVAYHLNKFSRGYTKAVNIQGTDHHGTIARVRAGLQAASK 369 Query: 377 K------KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430 K +L +++ + + G +KMSKR+G+++TLR +VD G D+ RF ++ RK Sbjct: 370 TLGVTIPKTFPEYILHKMLSVVKGGEVVKMSKRSGNYVTLRDLVDWAGRDAARFFLVSRK 429 Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI---FPDLD----FDLFPRN 483 FD K+ S ENPV+Y+QYA+AR S+F A + P+ + DL P N Sbjct: 430 ADAEFVFDVDLAKKNSDENPVYYLQYAHARICSVFTNALEQGYEIPNREALATMDLSPLN 489 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 E+ LI +AEYP + A P+ L +YL LA+ FH ++ R Sbjct: 490 SKAAEA--------LIGAVAEYPNTLRLAARDHAPHILCYYLKGLAAAFHAFYNAER 538 >gi|37523848|ref|NP_927225.1| arginyl-tRNA synthetase [Gloeobacter violaceus PCC 7421] gi|39932048|sp|Q7NDF6|SYR_GLOVI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|35214854|dbj|BAC92220.1| arginyl-tRNA synthetase [Gloeobacter violaceus PCC 7421] Length = 601 Score = 280 bits (716), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 191/580 (32%), Positives = 299/580 (51%), Gaps = 43/580 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V+E+P+ HG +T AM L++P L PL IAE I + + D V +A GFINL Sbjct: 39 VVVEKPKVPEHGDYATPVAMSLAKPCRLAPLAIAEAIASYLA--SDEIGVEVAKPGFINL 96 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L ++ L +I+ +YGR + + ++ +EFVSANPTGP+H+GH R A +G +L Sbjct: 97 RLGHRFVAVELQNILELKGDYGRTVPQQPERILLEFVSANPTGPLHLGHGRWAALGSSLE 156 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ F+GY V E+YINDAG Q+ L LS+ RY Q L +LP+G Y G YLK + + Sbjct: 157 RILQFAGYTVDSEFYINDAGNQMQLLGLSLKQRYLQVL-GEAVELPDGGYKGSYLKELAE 215 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 +L L P E W + + KI L+ + D + SE H Sbjct: 216 QLVADKGDSLGGEPVE-WFSAYAEGRLLEQQKIT---LQQFRTEFDRWYSERSLHCA--G 269 Query: 272 PIRDIIDNLARQGYVYEGILP--------PPKSKTTQ------KCDMDRKQLLFRSTMVG 317 I + +L +G +Y +SK Q + D + L F++ G Sbjct: 270 AIEAALADLEARGMLYRAARSRQEQSGEITGRSKKVQAPAAFEEEDGGGEALFFKAADFG 329 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 D++DR + ++DG+ TY AAD+AY KY+RG+ +I + G+DH GYV R++AVA A+ Sbjct: 330 DEMDRVVKRADGNTTYLAADIAYHWDKYQRGYGRLINIWGADHHGYVPRMKAVAQALGHP 389 Query: 378 KAQINVLLCELVRLYRDG------MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431 + +L+ ++VRL++ ++MSKR G+ +++ +++EVG D+ R+ +L + Sbjct: 390 ADSLEILIGQMVRLFKTNPETGQKEEMRMSKRRGELVSVDDLIEEVGVDAGRWFLLSQSL 449 Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQ 487 + ++FD + + +NPVFYVQY +ARC SI R+A + I +F L P + Sbjct: 450 NTTVNFDLDLAQSEKFDNPVFYVQYNHARCCSILRKAPERGMPILERFEF-LKPDGGLWL 508 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 E+ E L + L P A + + P +L Y YDLAS + H P L Sbjct: 509 ET---PQERTLALRLLAAPDEYRFAAVDRTPQRLTQYAYDLASDVSQFYEHCPILPPL-- 563 Query: 548 VQANNRK--LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A N + L RL LV A ++ + L ++G+E M Sbjct: 564 --AENLEPALRYARLGLVVATRQVLATTLTLLGIEPRESM 601 >gi|317010599|gb|ADU84346.1| arginyl-tRNA synthetase [Helicobacter pylori SouthAfrica7] Length = 541 Score = 280 bits (716), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 166/564 (29%), Positives = 288/564 (51%), Gaps = 49/564 (8%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKG 87 ++IE P+D HGH +T A L++ PL IAE + +I + F +A KG Sbjct: 16 EVIIEYPKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISMHAKTQGFFDSVVACKG 75 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT-KVNIEFVSANPTGPMHVGHCRCAVV 146 +IN LS +L + + ++G L + + K+ +EFVSANPTGP+H+GH R AV Sbjct: 76 YINFTLSLDFLERFTQKALELKEKFGSKLPSENSQKIFLEFVSANPTGPLHIGHARGAVF 135 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206 GD+LA + F G+EV EYY+ND G+QI L LSV+ Y++ + PE +Y G Y+ Sbjct: 136 GDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYI 195 Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 + ++ + L EE + ++ Y+ M+ I+D+L +L I D + SE + Sbjct: 196 IEIAQKARNDLEPSLFQENEETIIEVLSGYAKDLMLLEIKDNLDSLGIHFDSYASEKEVF 255 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 + + + L + +YE ++ +S++ D+ DR L+K Sbjct: 256 KHKDA----VFKTLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIK 295 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386 D +YTY A D+ Y K+++ + I + G+DH GY+ R++A + +++ VLL Sbjct: 296 EDKNYTYLAGDIVYHNEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSSKLEVLLA 355 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446 ++VRL +D P KMSKRAG+FI ++ V+D+VG D++RF+ L ++ L+FD +K+Q Sbjct: 356 QMVRLLKDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQD 415 Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAE 504 NP++Y+ YA +R ++ ++ F + I Q + E L+ Sbjct: 416 SSNPIYYIHYANSRIHTMLEKSP----------FSKEEILQTPLKNLNAEEKYLLFSALS 465 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQL 562 P++IE + K+ Y LAS FH ++ G+ + P+ + + L++ Sbjct: 466 LPKIIEASFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL-----------LKI 514 Query: 563 VHAVASIINSGLNIIGVESPNEMS 586 V+ + + ++G+E ++S Sbjct: 515 CLMVSLSLTNAFKLLGIEIKTKIS 538 >gi|254779018|ref|YP_003057123.1| arginyl-tRNA synthetase [Helicobacter pylori B38] gi|254000929|emb|CAX28865.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) (ArgRS)E [Helicobacter pylori B38] Length = 541 Score = 280 bits (715), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 168/571 (29%), Positives = 289/571 (50%), Gaps = 49/571 (8%) Query: 24 VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF- 82 +E+ + ++IE P+D HGH +T A L++ PL IAE + +I F Sbjct: 9 LEEVLEAEVIIEYPKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGFFD 68 Query: 83 --IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVG 139 +A KG+IN LS +L + + ++G + + K+ +EFVSANPTGP+H+G Sbjct: 69 SVVACKGYINFTLSLDFLERFTQKALELKEKFGSQIKSERSQKIFLEFVSANPTGPLHIG 128 Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199 H R AV GD+LA + F G+EV EYY+ND G+QI L LSV+ Y++ + PE Sbjct: 129 HARGAVFGDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYKEHVLKESVTYPEV 188 Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259 +Y G Y+ + K+ + L EE + ++ Y+ M+ I+D+L AL I D + Sbjct: 189 FYKGEYIIEIAKKANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSY 248 Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319 SE + + + + + L + +YE ++ +S++ D+ Sbjct: 249 ASEKEVFKHKDA----VFERLEKANALYE----------------KDSKIWLKSSLYQDE 288 Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 DR L+K D SYTY D+ Y K+++ + I + G+DH GY+ R++A + Sbjct: 289 SDRVLIKGDRSYTYLTGDVIYHDKKFQQNYTKYINIWGADHHGYIARVKASLEFLGHDSN 348 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439 ++ VLL ++VRL +D P KMSKRAG+FI ++ VVD+VG D++RF+ L ++ L+FD Sbjct: 349 KLEVLLAQMVRLLKDNEPYKMSKRAGNFILIKDVVDDVGKDALRFIFLSKRLDTHLEFDV 408 Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQ 497 +K+Q NP++Y+ YA +R ++ ++ F + I Q + E Sbjct: 409 NTLKKQDSSNPIYYIHYANSRIHTMLEKSP----------FSKEEILQTPLKNLNAEEKY 458 Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKL 555 L+ P+ +E++ K+ Y LAS FH ++ G+ + P+ + + Sbjct: 459 LLFSALSLPKAVESSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL------- 511 Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEMS 586 L++ V+ + + ++G+E ++S Sbjct: 512 ----LKICLMVSLSLTNAFKLLGIEIKTKIS 538 >gi|254457523|ref|ZP_05070951.1| arginyl-tRNA synthetase [Campylobacterales bacterium GD 1] gi|207086315|gb|EDZ63599.1| arginyl-tRNA synthetase [Campylobacterales bacterium GD 1] Length = 523 Score = 280 bits (715), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 164/506 (32%), Positives = 270/506 (53%), Gaps = 41/506 (8%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 +V+E+P+D GH +T A L++ L P+ IAE + + + ++ S + KG++N Sbjct: 8 EVVLEKPKDRTFGHFATPIAFSLAKELRKSPMVIAEDLASSFN-ESEIFSSVESVKGYLN 66 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 LS +L + + + E+G+ K +K+ +EFVSANPTGP+H+GH R AV GDTL Sbjct: 67 FRLSEDFLNEYGDWALQNQSEFGKQ--EKKSKILLEFVSANPTGPLHIGHARGAVYGDTL 124 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 L GY++T EYY+ND+G QI+ L LS+ ++ + + PE YY G YL+ + Sbjct: 125 YKLAKHLGYDITAEYYVNDSGNQIDLLGLSIQLYGRENILKESVEYPESYYRGEYLEGLA 184 Query: 211 KELADKYSSELL-NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 K +K+ E+L + +K L + ++ +M I+ + L NI D F++E + Sbjct: 185 KGAVEKFGKEILSDESRQKELAL---WAKDGVMDIVVNTLADTNIHFDTFVNESSLYND- 240 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 +E ++ +K D ++ S GDD DR +++ DG Sbjct: 241 -----------------WERVMKKMGDGIYKKDD----KVWIASEAKGDDNDRVVVREDG 279 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 TY A D+ Y K+ERG+D+ I + G+DH GY+ R+ A + +++ LL ++V Sbjct: 280 RPTYLAGDIVYHNQKFERGYDHYINIWGADHHGYIPRVNAAVEYLGYDSSKLETLLSQMV 339 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 L +DG P KMSKRAG+ I + +V+E+GSD++RF+ +K+ L+FD + K+Q N Sbjct: 340 SLLKDGEPYKMSKRAGNVILMSDIVEEIGSDALRFIFASKKSDTALEFDLSEFKKQDSSN 399 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES--EFDTSELQLIVHLAEYPR 507 P+FY+QYA+AR ++I ++ + R I S D + L+ P Sbjct: 400 PIFYIQYAHARIQTILSKSN----------YSREEISASSLKGLDENADSLLFDALLLPE 449 Query: 508 VIENATIAQEPYKLAFYLYDLASVFH 533 +IE+A +++ KL YL LA+ H Sbjct: 450 IIEDAFSSRQVQKLTDYLKALAASLH 475 >gi|319441082|ref|ZP_07990238.1| arginyl-tRNA synthetase [Corynebacterium variabile DSM 44702] Length = 558 Score = 280 bits (715), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 174/532 (32%), Positives = 269/532 (50%), Gaps = 33/532 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD S + + + ++ I+ D+ V+ERPR+ HG +TN A+ ++ G +P Sbjct: 4 ADLSVLISGAARTVLTDHGLDPAIVPDQPVVERPRNPEHGDYATNIALQTAKKAGTNPRD 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 + + + VD +AG GFIN+ L+ ++++ I+ +G YG G ++ Sbjct: 64 LGTWLAEALAAADGVDEATVAGPGFINIRLAADAQGRLVTDILTAGDAYGTGDDYTGQRI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++A G +VTREYY ND G QI+ A S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLAARGAQVTREYYFNDHGTQIDRFARSLVA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + ++ + + + + + + I + V M Sbjct: 184 AAKG------EPAPEDGYGGDYIADITDQVIEA-TPDWADHSDGEIQEIFRSQGVDLMFA 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L + D+F E+ + + I L G +YE Sbjct: 237 HIKRTLAEFGTEFDVFFHENALF--ESGAVEKAIQTLKDNGNLYEA-------------- 280 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 RS+ GDD DR ++KSDG+ Y A D+AY K +RG D IY++G+DH GY Sbjct: 281 --EGAWWLRSSNFGDDKDRVVIKSDGNAAYIAGDIAYIADKIDRGHDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 V RL+A AAA+ Q+ VL+ ++V L RDG ++MSKRAG ITL +V+ +G D+ R Sbjct: 339 VARLKAAAAALGYNPEQVEVLIGQMVNLVRDGKAVRMSKRAGTVITLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL--DFDLFP 481 + ++ LD D Q+ +NPVFYVQY +AR S+ R+A++ L D Sbjct: 399 YALIRSSVDSSLDIDMDLWTSQTSDNPVFYVQYGHARLCSLGRKAEENGISLPEDLSTLD 458 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 + + E D LI L E+P V+ A +EP+++A Y LA FH Sbjct: 459 LGTLTHDREGD-----LIRTLGEFPDVLATAAELREPHRVARYAEHLAGTFH 505 >gi|257438475|ref|ZP_05614230.1| arginine--tRNA ligase [Faecalibacterium prausnitzii A2-165] gi|257199054|gb|EEU97338.1| arginine--tRNA ligase [Faecalibacterium prausnitzii A2-165] Length = 604 Score = 280 bits (715), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 190/580 (32%), Positives = 296/580 (51%), Gaps = 41/580 (7%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD-SVF----I 83 L ++E P D +G +++N AM +R P IA+ ++A + P ++ SVF + Sbjct: 43 LPAFIVEIPADTKNGDIASNLAMAGARTWRKAPKMIADALLAHL---PSIEHSVFAKVEV 99 Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143 AG GFINL+L+PS+ ++ S EYGR GKG K N+EFVSANPTGPMH+G+ R Sbjct: 100 AGPGFINLFLAPSFWASVVLG-ACSNKEYGRTDHGKGAKYNVEFVSANPTGPMHMGNARG 158 Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYP 202 +GD LA+++ +SGY+VTRE+YINDAG QI S+ RY Q ++ LP Y Sbjct: 159 GALGDCLAAVLDWSGYDVTREFYINDAGNQIQKFGKSLAVRYLQQFCGEETYPLPAECYQ 218 Query: 203 GVYLKHVGKELA----DKYSSELLNFPEEKWLP---------IVKDYSVQAMMKIIRDDL 249 G +K + E A DKY + EE + DY++ + ++ DL Sbjct: 219 GGDIKVLAGEFAEINGDKYVAACSGLDEEALFASEAFETLKNALVDYALPKNIAALKRDL 278 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY---EGILPPPKSKTTQKCDMDR 306 I +D++ E H + + D+++ L G Y +G + ++ K Sbjct: 279 GKYRIDYDVWFHESTLH--ESGAVLDVVNKLLELGACYKAEDGAIMYRSAQYAAKYGTVN 336 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVK 365 K+ T + D L++++G TYFAAD+AY K RGF I V G+DH G+V Sbjct: 337 KKKTEDGTEE-EAKDEVLVRANGIPTYFAADIAYHYNKLATRGFAKAIDVWGADHHGHVA 395 Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425 R++ A+ ++V+L ++V L RDG P++MSKR G+ ITL +++EV DS RF+ Sbjct: 396 RMKGAMDAIGLNGNDLDVVLMQMVNLMRDGQPVRMSKRTGNAITLTDLLEEVPIDSARFL 455 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 +DFD + + +NPV+YVQYA+AR SI ++ + + Sbjct: 456 FNMHDAGSGIDFDLDQAVKTDNDNPVYYVQYAHARICSILKKME----SEGVAFAGAEQV 511 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 D SE+ LI LA +P+ I A +P ++ ++ DLAS FH + + R Sbjct: 512 DATLLTDPSEMDLIRMLAAFPQEIVMAAEKYDPSRINRFVIDLASAFHRFYGNCR----- 566 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +Q + + RL L V ++I + L + + P +M Sbjct: 567 --IQGADPAVQQARLALCIGVKNVIFNVLTMFKINVPEKM 604 >gi|294786695|ref|ZP_06751949.1| arginine--tRNA ligase [Parascardovia denticolens F0305] gi|315226309|ref|ZP_07868097.1| arginyl-tRNA synthetase [Parascardovia denticolens DSM 10105] gi|294485528|gb|EFG33162.1| arginine--tRNA ligase [Parascardovia denticolens F0305] gi|315120441|gb|EFT83573.1| arginyl-tRNA synthetase [Parascardovia denticolens DSM 10105] Length = 606 Score = 279 bits (714), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 183/599 (30%), Positives = 295/599 (49%), Gaps = 80/599 (13%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 D+I + RP+D +HG +TN AM L + G+ P +A+ ++ DP + SV +AG GFI Sbjct: 45 DKIAVMRPKDRSHGDWATNIAMQLGKKAGMAPRDLAQKFAQALQADPGIASVEVAGPGFI 104 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N+ L+ + +I+ I+ +G N G +N+EFVSANPTGP+H+G R A +GD Sbjct: 105 NITLNAASASQIVDQILDQKAAFGTNDHLAGKTLNLEFVSANPTGPIHIGGTRWAAIGDA 164 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 LA ++ +G V REYY ND G QIN A S+ + + P Y G Y+ + Sbjct: 165 LARILQANGAHVIREYYFNDHGEQINRFAKSLV------AAAHGEEAPADGYKGAYIDEI 218 Query: 210 GKELADKYSSE---LLNFP------EEKWLPIVKDYSVQ----------AMMKIIRDDLK 250 +++ D+ +E +L+ P + P+ + S Q M I+ + Sbjct: 219 AQKVIDQAKAESIDVLSLPRVDGGKDADGQPLGEGDSEQREEFRKRAVPMMFDEIKQSMA 278 Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE-GILPPPKSKTTQKCDMDRKQ- 308 + D++ E+ VYE G + + D+ RK Sbjct: 279 DFRVNFDVYFHENS---------------------VYEDGEVDAAFQRLKDLGDIYRKDG 317 Query: 309 -LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM---IYVMGSDHSGYV 364 F+ST GDD DR ++KS+G Y D+AY+ K R D IY++G+DH GYV Sbjct: 318 ATWFKSTKYGDDKDRVIIKSNGEAAYIMGDIAYYWNKRHRKQDPADIAIYMLGADHHGYV 377 Query: 365 KRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 RL+AV AA E + +L+ +LV + + G P++MSKRAG+ +T+ +V VG D+ R Sbjct: 378 NRLQAVCAAFGDEPNYNMQILIGQLVNVVKGGQPVRMSKRAGNVVTIDDLVGVVGVDATR 437 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLF 480 + + ++ +D D + + S ENPV+YVQYA+AR +++ R A D L Sbjct: 438 YSLERTSYTQNIDIDLDLLSQHSNENPVYYVQYAHARSKNVDRNAAAAGLTVGGADLSLL 497 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 ++E D+ +++ LA YP V+ +A EP++LA YL DLA +H ++ R Sbjct: 498 -------DTEADS---EILAQLALYPSVVASAADLNEPHRLAHYLEDLAGKYHQWYAAER 547 Query: 541 ENP--------------RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P ++ + RL+L A A + +GL ++ + +P++M Sbjct: 548 VVPMELTEKEAQSADAQAIKVAKDPEPARAAARLKLNDAAAQVFENGLGLLAITAPDKM 606 >gi|189501392|ref|YP_001960862.1| arginyl-tRNA synthetase [Chlorobium phaeobacteroides BS1] gi|229558754|sp|B3EQ83|SYR_CHLPB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|189496833|gb|ACE05381.1| arginyl-tRNA synthetase [Chlorobium phaeobacteroides BS1] Length = 553 Score = 279 bits (714), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 183/563 (32%), Positives = 296/563 (52%), Gaps = 42/563 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFIN 90 I IE+P D G STN A++L+ G++P +A+ I + + V IAG GFIN Sbjct: 24 IKIEKPSDSRFGDFSTNIALVLAGECGMNPRQLAQKITENLSFSETTVSKTEIAGPGFIN 83 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL P+++ K + I+ S +GR G+G +E+VSANPTGP+ +G R V+GD + Sbjct: 84 FYLEPAFIMKQVEQIITSSDRFGRGAAGEGKNAIVEYVSANPTGPLTIGRGRGGVLGDCI 143 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+++ GY VTREYY NDAG Q++ L+ SV RY + L + PE +Y G Y++ + Sbjct: 144 ANILEAHGYTVTREYYFNDAGRQMSILSESVRLRYIE-LCGIAVEFPETHYQGDYIREIA 202 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 + +K+ +L+ E + K + + I++ L L+I HD + +E ++ D Sbjct: 203 AAILEKHGEKLV---ESDSTELFKQTAETHIFTHIKNTLHRLDITHDSYFNEHRLYQEDE 259 Query: 271 ---SPIRDIIDNLARQGYV--YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 SP + +ID L ++G++ Y+G F +T +G + D+ L+ Sbjct: 260 SGISPNQQVIDALRQKGFIDHYDG------------------ATWFMTTRLGQEKDKVLV 301 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVL 384 KS G +Y D+AY K+ERGFD ++ + G+DH Y +EA+ + +I V Sbjct: 302 KSSGEPSYRLPDIAYHVTKFERGFDEIVNIFGADHIDEYPDVIEAL-KILGYDTDRIRVA 360 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 + + V +G +KMS R G+ L ++D+VG+D+ R + R L+FD K+ Sbjct: 361 INQFVTTTVNGETVKMSTRKGNADLLDDLIDDVGADATRLFFIMRSKDSHLNFDIDLAKK 420 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS--ELQLIVHL 502 QSK+NPVFY+QYA+AR S+ R A++ + F L + TS E+QL L Sbjct: 421 QSKDNPVFYLQYAHARICSLLRIAEN---EAGFSLEEGSADAHLMGKLTSAHEIQLGFTL 477 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 +YP VI+ EP K+ YL+ +A ++H + +E P L+ + + RL L Sbjct: 478 LDYPDVIQTCARILEPQKMVEYLHSVAELYHRFY---QECPILK----ADPDIRSARLIL 530 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 A ++ +G I+G+ +P M Sbjct: 531 SLATRQVLRNGFRILGISAPKSM 553 >gi|109947543|ref|YP_664771.1| arginyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba] gi|123173388|sp|Q17X54|SYR_HELAH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|109714764|emb|CAJ99772.1| argS [Helicobacter acinonychis str. Sheeba] Length = 541 Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 167/564 (29%), Positives = 284/564 (50%), Gaps = 49/564 (8%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKG 87 ++IE P+D HGH +T A L++ PL IAE + +I F +A KG Sbjct: 16 EVIIEHPKDREHGHYATPIAFNLAKIFKKSPLVIAEELALKISTHAKTQGFFDSVVACKG 75 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT-KVNIEFVSANPTGPMHVGHCRCAVV 146 +IN LS +L + + ++G + + K+ +EFVSANPTGP+H+GH R AV Sbjct: 76 YINFTLSLDFLERFTQKALELKEKFGSKFKSENSQKIFLEFVSANPTGPLHIGHARGAVF 135 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206 GD+LA + F G+EV EYY+ND G+QI L LSV+ Y++ + PE +Y G Y+ Sbjct: 136 GDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKEGVTYPEVFYKGEYI 195 Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 + K+ + L EE + ++ Y+ M+ I+D+L +L I D + SE + Sbjct: 196 IEIAKKAHNDLEPSLFKENEETIIEVLSSYAKDLMLLEIKDNLDSLGIHFDSYASEKEIF 255 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 + + + NL + +YE ++ +S++ D+ DR L+K Sbjct: 256 KHKDA----VFKNLEKANALYE----------------KDSKIWLKSSLYQDESDRVLVK 295 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386 D +YTY A D+ Y K+++ + I + G+DH GY+ R++A + ++ VLL Sbjct: 296 EDKNYTYLAGDIVYHNEKFKQNYTKYINIWGADHHGYIARVKASLKFLGYDSNKLEVLLA 355 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446 ++V L +D P KMSKRAG+FI ++ VVD++G D++RF+ L ++ L+FD +K+Q Sbjct: 356 QMVGLLKDNEPYKMSKRAGNFILIKDVVDDIGKDALRFIFLSKRLDTHLEFDVNTLKKQD 415 Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAE 504 NP++Y+ YA +R ++ ++ F + I Q + E L+ Sbjct: 416 SSNPIYYIHYANSRIHTMLEKSP----------FSKEEILQTPLKNLNAEEKYLLFSALS 465 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQL 562 P++IE + K+ Y LAS FH ++ G+ + P+ T L++ Sbjct: 466 LPKIIEASFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPK-----------TKELLKI 514 Query: 563 VHAVASIINSGLNIIGVESPNEMS 586 V+ + + ++G+E ++S Sbjct: 515 CLMVSLSLTNAFKLLGIEIKTKIS 538 >gi|291457069|ref|ZP_06596459.1| arginine--tRNA ligase [Bifidobacterium breve DSM 20213] gi|291380904|gb|EFE88422.1| arginine--tRNA ligase [Bifidobacterium breve DSM 20213] Length = 620 Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 181/615 (29%), Positives = 310/615 (50%), Gaps = 86/615 (13%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 +D++ + RP+D AHG ++N AM L++ G+ P +AE A + + V +AG GF Sbjct: 34 IDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKPRDLAEPFAAALAEADGIAKVEVAGPGF 93 Query: 89 INLYLSPSYLRKILSSIVVSGI------------EYGRNLIGKGTKVNIEFVSANPTGPM 136 IN+ L + ++ +++ + EYGRN G +N+EFVSANPTGP+ Sbjct: 94 INITLDSASAAAVVDTVLAAAPAVDGDKHLNKVNEYGRNAHLGGQTLNLEFVSANPTGPI 153 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA----LYNN 192 H+G R A VGD +A ++ +G +V REYY ND G QIN A S+ + +A Sbjct: 154 HIGGTRWAAVGDAMARVLEANGAKVVREYYFNDHGEQINRFAKSLVAAWAEANKLGGAGY 213 Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFP----EEKWL-----PIVKD-------- 235 ++ P Y G Y+ + + + ++ +N +++ L P+ +D Sbjct: 214 QTETPCDGYKGAYINEIAARVEAEAKADGVNLTALAHQDQGLNDDGEPLGEDDTEVREEF 273 Query: 236 --YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 +V M I+ +K + D++ E+ + + I+ L G +Y+ Sbjct: 274 RKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLYA--DKKVEAAIEELKSHGDIYD----- 326 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG---FD 350 K T F ST GDD DR ++KS+G + YFAAD+AY+ K R D Sbjct: 327 -KDGAT----------WFESTKHGDDKDRVIIKSNGEFAYFAADIAYYWDKRHRAENPAD 375 Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFIT 409 IY++G+DH GY+ R+ A+ AA ++ + + +L+ +LV + +DG P++MSKRAG+ +T Sbjct: 376 VAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQILIGQLVNVMKDGKPVRMSKRAGNVVT 435 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 + +V VG D+ R+ + ++ D D + + +NPV+YVQYA+AR +++ R A Sbjct: 436 IDDLVSVVGVDAARYSLARSDYNQNFDIDLALLASHTNDNPVYYVQYAHARSKNVDRNAA 495 Query: 470 DI---FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 + D L ++E D +++ LA++P V+ A ++P+K+A YL Sbjct: 496 AAGISYEGADLSLL-------DTEADG---EVLAALAQFPSVLATAADDRQPHKVARYLE 545 Query: 527 DLASVFHGHWSHGR------ENPRLRFVQANNRKLTM----------MRLQLVHAVASII 570 +LA+ +H ++ R +P R + L + RL+L AV +I Sbjct: 546 ELAATYHKWYNVERVVPMALTDPETRGDNEARKALEIAKNPEPARAAARLKLNDAVQQVI 605 Query: 571 NSGLNIIGVESPNEM 585 +GL+++GV +P +M Sbjct: 606 ANGLDLLGVTAPEKM 620 >gi|325997202|gb|ADZ49410.1| Arginyl-tRNA synthetase [Helicobacter pylori 2017] Length = 541 Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 168/571 (29%), Positives = 289/571 (50%), Gaps = 49/571 (8%) Query: 24 VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF- 82 +E+ + ++IE P+D HGH +T A L++ PL IAE + +I F Sbjct: 9 LEEVLEAEVIIEYPKDREHGHYATPIAFNLAKVFKKSPLAIAEELALKISTHKKTQGFFD 68 Query: 83 --IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVG 139 +A KG+IN LS +L + + ++G + + K+ +EFVSANPTGP+H+G Sbjct: 69 SVVACKGYINFTLSLDFLDRFTQKALELKEQFGSQVKSERSQKIFLEFVSANPTGPLHIG 128 Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199 H R AV GD+LA + F G+EV EYY+ND G+QI L LSV+ Y++ + PE Sbjct: 129 HARGAVFGDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEV 188 Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259 +Y G Y+ + K+ + L EE + ++ Y+ M+ I+ +L AL I D + Sbjct: 189 FYKGEYIIEIAKKAHNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKGNLDALGIHFDSY 248 Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319 SE + + + + + L R +YE ++ +S++ D+ Sbjct: 249 ASEREIFKHKDA----VFERLERANALYE----------------KDSKIWLKSSLYQDE 288 Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 DR L+K D SYTY A D+ Y K+++ + I + G+DH GY+ R++A + Sbjct: 289 SDRVLIKEDKSYTYLAGDIVYHDEKFQQNYTKYINIWGADHHGYIARVKASLEFLGYDSN 348 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439 ++ VLL ++VRL +D P KMSKRAG+FI ++ V+D+VG D++RF+ L ++ L+FD Sbjct: 349 KLEVLLAQMVRLLKDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDV 408 Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQ 497 +K+Q NP++Y+ YA +R ++ ++ F + I Q + E Sbjct: 409 NTLKKQDSSNPIYYIHYANSRIHTMLEKSP----------FSKEEIWQTPLKNLNAEEKY 458 Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKL 555 L+ P+ +E++ K+ Y LAS FH ++ G+ + P+ + + Sbjct: 459 LLFSALSLPKAVESSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL------- 511 Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEMS 586 L++ V+ + + ++G+E ++S Sbjct: 512 ----LKICLMVSLSLTNAFKLLGIEIKTKIS 538 >gi|322691947|ref|YP_004221517.1| arginyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM 1217] gi|320456803|dbj|BAJ67425.1| arginyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM 1217] Length = 620 Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 180/614 (29%), Positives = 314/614 (51%), Gaps = 84/614 (13%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 +D++ + RP+D AHG ++N AM L++ G+ P +AE A + + V +AG GF Sbjct: 34 VDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKPRDLAEPFAAALAEADGIAKVEVAGPGF 93 Query: 89 INLYLSPSYLRKILSSIVVSGI------------EYGRNLIGKGTKVNIEFVSANPTGPM 136 IN+ L + ++ +++ +G EYGRN G +N+EFVSANPTGP+ Sbjct: 94 INITLDSASAAAVVDTVLAAGAMTDTDKHLNKVNEYGRNAHLGGQTLNLEFVSANPTGPI 153 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---- 192 H+G R A VGD +A ++ +G +V REYY ND G QIN A S+ + +A NN Sbjct: 154 HIGGTRWAAVGDAMARVLEANGAKVVREYYFNDHGEQINRFAKSLVAAWAEA--NNLGEA 211 Query: 193 --DSDLPEGYYPGVYLKHVGKELADKYSSELLNFP----EEKWL-----PI--------- 232 ++ P Y G Y+ + + + S+ ++ +++ L P+ Sbjct: 212 GYQTETPCDGYKGAYINEIAARVQAEAESDGVDLTALAHQDQGLNDDGEPLGEADTEVRE 271 Query: 233 -VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291 + +V M I+ +K + D++ E+ + + I+ L +G +++ Sbjct: 272 EFRKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLYA--DGKVDAAIEELKSRGDIFD--- 326 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG--- 348 K T F ST GDD DR ++KS+G + YFAAD+AY+ K R Sbjct: 327 ---KDGAT----------WFESTKHGDDKDRVIIKSNGEFAYFAADIAYYWDKRHRAENP 373 Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDF 407 D IY++G+DH GY+ R+ A+ AA ++ + + +L+ +LV + +DG P++MSKRAG+ Sbjct: 374 ADVAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQILIGQLVNVMKDGKPVRMSKRAGNV 433 Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467 +T+ +V VG D+ R+ + ++ D D + + +NPV+YVQYA+AR +++ R Sbjct: 434 VTIDDLVSVVGVDAARYSLARSDYNQNFDIDLALLASHTNDNPVYYVQYAHARSKNVDRN 493 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 A + ++ ++ E++ +++ LA++P VI A ++P+K+A YL + Sbjct: 494 AA--VAGISYEGADLALLDTEADG-----EVLAALAQFPSVIATAADDRQPHKVARYLEE 546 Query: 528 LASVFHGHWSHGR------ENPRLRFVQANNRKLTM----------MRLQLVHAVASIIN 571 LA+ +H ++ R +P R + L + RL+L AV +I Sbjct: 547 LAATYHKWYNVERVVPMALTDPETRGDDEARKALEIAKNPEPARAAARLKLNDAVQQVIA 606 Query: 572 SGLNIIGVESPNEM 585 +GL+++GV +P +M Sbjct: 607 NGLDLLGVTAPEKM 620 >gi|227546999|ref|ZP_03977048.1| arginine--tRNA ligase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227212531|gb|EEI80420.1| arginine--tRNA ligase [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 640 Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 182/617 (29%), Positives = 313/617 (50%), Gaps = 90/617 (14%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 +D++ + RP+D AHG ++N AM L++ G+ P +AE A + + V +AG GF Sbjct: 54 VDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKPRDLAEPFAAALAEADGIAKVEVAGPGF 113 Query: 89 INLYLSPSYLRKILSSIVVSGI------------EYGRNLIGKGTKVNIEFVSANPTGPM 136 IN+ L + ++ +++ +G EYGRN G +N+EFVSANPTGP+ Sbjct: 114 INITLDSASAAAVVDTVLAAGAMTDTDKHLNKVNEYGRNAHLGGQTLNLEFVSANPTGPI 173 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---- 192 H+G R A VGD +A ++ +G +V REYY ND G QIN A S+ + +A NN Sbjct: 174 HIGGTRWAAVGDAMARVLEANGAKVVREYYFNDHGEQINRFAKSLVAAWAEA--NNLGEA 231 Query: 193 --DSDLPEGYYPGVYLKHVGKELADKYSSELLNFP----EEKWL-----PI--------- 232 ++ P Y G Y+ + + + S+ ++ +++ L P+ Sbjct: 232 GYQTETPCDGYKGAYINEIAARVQAEAESDGVDLTALAHQDQGLNDDGEPLGEADTEVRE 291 Query: 233 -VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291 + +V M I+ +K + D++ E+ + + I+ L +G +++ Sbjct: 292 EFRKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLYA--DGKVDAAIEELKSRGDIFD--- 346 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG--- 348 K T F ST GDD DR ++KS+G + YFAAD+AY+ K R Sbjct: 347 ---KDGAT----------WFESTKHGDDKDRVIIKSNGEFAYFAADIAYYWDKRHRAENP 393 Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDF 407 D IY++G+DH GY+ R+ A+ AA ++ + + +L+ +LV + +DG P++MSKRAG+ Sbjct: 394 ADVAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQILIGQLVNVMKDGKPVRMSKRAGNV 453 Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467 +T+ +V VG D+ R+ + ++ D D + + +NPV+YVQYA+AR +++ R Sbjct: 454 VTIDDLVSVVGVDAARYSLARSDYNQNFDIDLALLASHTNDNPVYYVQYAHARSKNVDRN 513 Query: 468 AKDI---FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 A + D L ++E D +++ LA++P V+ A ++P+K+A Y Sbjct: 514 AAAAGISYEGADLALL-------DTEADG---EVLAALAQFPSVLATAADDRQPHKVARY 563 Query: 525 LYDLASVFHGHWSHGR------ENPRLRFVQANNRKLTM----------MRLQLVHAVAS 568 L +LA+ +H ++ R +P R + L + RL+L AV Sbjct: 564 LEELAATYHKWYNVERVVPMALTDPETRGDDEARKALEIAKNPEPARAAARLKLNDAVQQ 623 Query: 569 IINSGLNIIGVESPNEM 585 +I +GL+++GV +P +M Sbjct: 624 VIANGLDLLGVTAPEKM 640 >gi|305431795|ref|ZP_07400962.1| arginine--tRNA ligase [Campylobacter coli JV20] gi|304444879|gb|EFM37525.1| arginine--tRNA ligase [Campylobacter coli JV20] Length = 530 Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 174/562 (30%), Positives = 293/562 (52%), Gaps = 45/562 (8%) Query: 26 KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84 KKIL+ +E P+D H +T A L++ L P++IA + A+ + D V A Sbjct: 10 KKILECDFALENPKDKNLAHFATPLAFSLAKELRKSPISIANELAAKFQEHSYFDKV-EA 68 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 G++N LS ++L ++ + + + E+ + K +E+VSANPTGP+H+GH R A Sbjct: 69 LNGYLNFRLSKTFLNELANKALQNPNEFSKGE-DKTESFLLEYVSANPTGPLHIGHARGA 127 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204 V GDTL L GY+ EYY+NDAG QI L LS+ ++ + + + + PE YY G Sbjct: 128 VFGDTLTRLARHLGYKFNTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQYYKGE 187 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 Y+ + KE +K+ E F EE +P + D++ M+ +I+ +L+ I+ D ++SE Sbjct: 188 YIADLAKEAFEKFGKEF--FSEEN-IPSLADWAKDKMLVLIKQNLEQAKIKIDSYVSERS 244 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 ++ + +++L +YE ++ S+ GD+ DR + Sbjct: 245 YY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEKDRVI 284 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 ++ DG TY AAD+ Y K K RG+ I + G+DH GY+ R++A + + ++ Sbjct: 285 IREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNNLEII 344 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L ++V L +DG P KMSKRAG+FI + VVDE+GSD++R++ L +K L+FD +++ Sbjct: 345 LAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDISDLQK 404 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLIVHLA 503 + NPV+Y+ YA+AR +F +A D + DL + + L+ Sbjct: 405 EDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADL---------QSLNQDGVNLLFEAL 455 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 V+ +A A+ K+ YL +LA+ FH ++ EN + N+ L+L Sbjct: 456 NLKAVLNDAFEARALQKIPDYLKNLAANFHKFYN---ENKVVGSANEND------LLKLF 506 Query: 564 HAVASIINSGLNIIGVESPNEM 585 VA I + +++G+E+ N+M Sbjct: 507 SLVALSIKTAFSLMGIEAKNKM 528 >gi|15644947|ref|NP_207117.1| arginyl-tRNA synthetase [Helicobacter pylori 26695] gi|2501046|sp|P56128|SYR_HELPY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|2313419|gb|AAD07388.1| arginyl-tRNA synthetase (argS) [Helicobacter pylori 26695] Length = 541 Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 167/558 (29%), Positives = 288/558 (51%), Gaps = 49/558 (8%) Query: 37 PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93 P+D HGH +T A L++ PL IAE + +I +F +A KG+IN L Sbjct: 22 PKDREHGHYATPIAFNLAKVFKKSPLAIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 S +L + + ++G + + K+ +EFVSANPTGP+H+GH R AV GD+LA Sbjct: 82 SLDFLERFTQKALELKEKFGSQVKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 + F G+EV EYY+ND G+QI L LSV+ Y++ + PE +Y G Y+ + K+ Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 + LL EE + ++ Y+ M+ I+D+L AL I D + SE + + + Sbjct: 202 ANNDLEPSLLKENEETIIEVLSGYARDLMLLEIKDNLDALGIHFDSYASEKEVFKHKDA- 260 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + + L + +YE ++ +S++ D+ DR L+K D SYT Sbjct: 261 ---VFEQLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 Y A D+ Y K+++ + I + G+DH GY+ R++A + ++ VLL ++VRL Sbjct: 302 YLAGDIVYHDEKFKQDYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 +D P KMSKRAG+FI ++ VVD+VG D++RF+ L ++ L+FD +K+Q NP++ Sbjct: 362 KDNEPYKMSKRAGNFILIKDVVDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510 Y+ YA +R ++ ++ F + + Q + + E L+ P+ IE Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEVLQTPLTNLNAEEKYLLFSALSLPKAIE 471 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568 ++ K+ Y LAS FH ++ G+ + P+ + ++++ L+ V+ Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAK---------ELLKICLI--VSL 520 Query: 569 IINSGLNIIGVESPNEMS 586 +++ ++G+E ++S Sbjct: 521 SLSNAFKLLGIEIKTKIS 538 >gi|325995606|gb|ADZ51011.1| Arginyl-tRNA synthetase [Helicobacter pylori 2018] Length = 541 Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 168/571 (29%), Positives = 289/571 (50%), Gaps = 49/571 (8%) Query: 24 VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF- 82 +E+ + ++IE P+D HGH +T A L++ PL IAE + +I F Sbjct: 9 LEEVLEAEVIIEYPKDREHGHYATPIAFNLAKVFKKSPLAIAEELALKISTHKKTQGFFD 68 Query: 83 --IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVG 139 +A KG+IN LS +L + + ++G + + K+ +EFVSANPTGP+H+G Sbjct: 69 SVVAFKGYINFTLSLDFLDRFTQKALELKEQFGSQVKSERSQKIFLEFVSANPTGPLHIG 128 Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199 H R AV GD+LA + F G+EV EYY+ND G+QI L LSV+ Y++ + PE Sbjct: 129 HARGAVFGDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEV 188 Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259 +Y G Y+ + K+ + L EE + ++ Y+ M+ I+ +L AL I D + Sbjct: 189 FYKGEYIIEIAKKAHNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKGNLDALGIHFDSY 248 Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319 SE + + + + + L R +YE ++ +S++ D+ Sbjct: 249 ASEREIFKHKDA----VFERLERANALYE----------------KDSKIWLKSSLYQDE 288 Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 DR L+K D SYTY A D+ Y K+++ + I + G+DH GY+ R++A + Sbjct: 289 SDRVLIKEDKSYTYLAGDIVYHDEKFQQNYTKYINIWGADHHGYIARVKASLEFLGYDSN 348 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439 ++ VLL ++VRL +D P KMSKRAG+FI ++ V+D+VG D++RF+ L ++ L+FD Sbjct: 349 KLEVLLAQMVRLLKDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDV 408 Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQ 497 +K+Q NP++Y+ YA +R ++ ++ F + I Q + E Sbjct: 409 NTLKKQDSSNPIYYIHYANSRIHTMLEKSP----------FSKEEIWQTPLKNLNAEEKY 458 Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKL 555 L+ P+ +E++ K+ Y LAS FH ++ G+ + P+ + + Sbjct: 459 LLFSALSLPKAVESSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL------- 511 Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEMS 586 L++ V+ + + ++G+E ++S Sbjct: 512 ----LKICLMVSLSLTNAFKLLGIEIKTKIS 538 >gi|189347953|ref|YP_001944482.1| arginyl-tRNA synthetase [Chlorobium limicola DSM 245] gi|229558752|sp|B3EIJ1|SYR_CHLL2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|189342100|gb|ACD91503.1| arginyl-tRNA synthetase [Chlorobium limicola DSM 245] Length = 551 Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 187/564 (33%), Positives = 294/564 (52%), Gaps = 46/564 (8%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA-ELIVARIKIDPDVDSVFIAGKGFIN 90 + IE+P D +G STN A++LS+ +P +A ELI I D V+ + IAG GFIN Sbjct: 24 VQIEKPTDKKNGDFSTNIALLLSKECRRNPRELAAELIGQMIFPDGTVERIEIAGPGFIN 83 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL+P ++ + + I++ G YG + GKG +E+VSANPTGP+ +G R V+GD + Sbjct: 84 FYLTPLFIMQSVEHILLEGKGYGSSCAGKGKTAIVEYVSANPTGPLTIGRGRGGVLGDCI 143 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+L+A GY +TREYY NDAG Q+ L SV +RY + D PE +Y G Y++ + Sbjct: 144 ANLLATQGYGLTREYYFNDAGRQMQILGESVRYRYMERC-GRDIVFPESHYQGEYIREIA 202 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH--RG 268 + L ++ S L++ L I KD + + I+ L ++I+HD F +E + G Sbjct: 203 EILFLEHESSLID---SDNLSIFKDTAEAIIFSSIKKTLARIDIRHDSFFNEHTLYIAEG 259 Query: 269 DPSPIRD-IIDNLARQGYV--YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 + D +++ L +G++ Y+G F +T +G + D+ L+ Sbjct: 260 NGKSANDRVLELLESKGFIDRYDG------------------ATWFLTTKLGQEKDKVLV 301 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVL 384 KS G +Y D+AY KY R FD ++ V G+DH Y LEA+ + +++ V Sbjct: 302 KSSGEPSYRLPDIAYHLDKYRRKFDLIVNVFGADHIDEYPDVLEAL-RILGHDTSKMRVA 360 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 + + V DG +KMS R G+ L ++D+VG+D+ R + R L+FD K+ Sbjct: 361 INQFVTTTVDGETVKMSTRKGNADLLDELIDDVGADATRLFFIMRSKDSHLNFDIELAKK 420 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501 QSK+NPVFY+QYA+AR S+ R A + PD + + + E+QL Sbjct: 421 QSKDNPVFYLQYAHARICSLLRIAAEEAGFKPDGSGAHLLQKLTLE------PEIQLGFT 474 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 L +YP VI A EP K+ YL+ +A +H + +E P L+ + + RL Sbjct: 475 LLDYPEVIRTAIRLLEPQKMVEYLHSVAEQYHKFY---QECPILK----ADPDIRTARLF 527 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 L A ++ +G I+G+ +P M Sbjct: 528 LSLATRQVLRNGFTILGISAPESM 551 >gi|320459349|dbj|BAJ69970.1| arginyl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 640 Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 178/612 (29%), Positives = 313/612 (51%), Gaps = 80/612 (13%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 +D++ + RP+D AHG ++N AM L++ G+ P +AE A + + V +AG GF Sbjct: 54 VDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKPRDLAEPFAAALAEADGIAKVEVAGPGF 113 Query: 89 INLYLSPSYLRKILSSIVVSGI------------EYGRNLIGKGTKVNIEFVSANPTGPM 136 IN+ L + ++ +++ +G EYGRN G +N+EFVSANPTGP+ Sbjct: 114 INITLDSASAAAVVDTVLAAGAVTDTDKHLNKVNEYGRNAHLGGQTLNLEFVSANPTGPI 173 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--- 193 H+G R A VGD +A ++ +G +V REYY ND G QIN A S+ + +A D Sbjct: 174 HIGGTRWAAVGDAMARVLEANGAKVVREYYFNDHGEQINRFAKSLVAAWAEANNLGDAGY 233 Query: 194 -SDLPEGYYPGVYLKHVGKELADKYSSELLNFP----EEKWL-----PI----------V 233 ++ P Y G Y+ + + + S+ ++ +++ L P+ Sbjct: 234 QTETPCDGYKGAYINEIAARVQAEAESDGVDLTALAHQDQGLNDDGEPLGEADTEVREEF 293 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 + +V M I+ +K + D++ E+ + + I+ L +G +++ Sbjct: 294 RKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLYA--DGKVDAAIEELKSRGDIFD----- 346 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG---FD 350 K T F ST GDD DR ++KS+G + YFAAD+AY+ K R D Sbjct: 347 -KDGAT----------WFESTKHGDDKDRVIIKSNGEFAYFAADIAYYWDKRHRAENPAD 395 Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFIT 409 IY++G+DH GY+ R+ A+ AA ++ + + +L+ +LV + +DG P++MSKRAG+ +T Sbjct: 396 VAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQILIGQLVNVMKDGKPVRMSKRAGNVVT 455 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 + +V VG D+ R+ + ++ D D + + +NPV+YVQYA+AR +++ R A Sbjct: 456 IDDLVSVVGVDAARYSLARSDYNQNFDIDLALLASHTNDNPVYYVQYAHARSKNVDRNAA 515 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 + ++ ++ E++ +++ LA++P V+ A ++P+K+A YL +LA Sbjct: 516 --VAGISYEGADLALLDTEADG-----EVLAALAQFPSVLATAADDRQPHKVARYLEELA 568 Query: 530 SVFHGHWSHGR------ENPRLRFVQANNRKLTM----------MRLQLVHAVASIINSG 573 + +H ++ R +P R + L + RL+L AV +I +G Sbjct: 569 ATYHKWYNVERVVPMVLTDPETRGDDEARKALEIAKNPEPARAAARLKLNDAVQQVIANG 628 Query: 574 LNIIGVESPNEM 585 L+++GV +P +M Sbjct: 629 LDLLGVTAPEKM 640 >gi|217077840|ref|YP_002335558.1| arginyl-tRNA synthetase [Thermosipho africanus TCF52B] gi|217037695|gb|ACJ76217.1| arginyl-tRNA synthetase [Thermosipho africanus TCF52B] Length = 543 Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 183/556 (32%), Positives = 293/556 (52%), Gaps = 41/556 (7%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +E P D G STN A+I S+ P +A+L V ++ + V IAG GFIN + Sbjct: 25 VEIP-DENFGDYSTNIALIGSKHFKKPPREVAKLFVDKLSKESIFSEVTIAGPGFINFRI 83 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 S + ILS ++ Y + + K+ +E+ SANPTGP VGH R V+GD L ++ Sbjct: 84 SKDFYLSILSEMIKKEKAYWK-IQKNNKKIQLEYGSANPTGPFTVGHGRQIVIGDVLGNV 142 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + F GY+VT+E YINDAG QI L S++ RY + L+ + +LPE Y G YL K+L Sbjct: 143 LEFLGYDVTKEMYINDAGRQIRLLGRSLWVRYNE-LFGKEYELPEDGYRGDYLIDFAKKL 201 Query: 214 ADKYSSELLNFPEEKWLPIVKD----YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 D E+ N EKW V+ YSV+ ++K + D L L+ D Sbjct: 202 KD----EIGNKYVEKWDDEVEKFFMKYSVENILKTMDDTLSMLDCGFD------------ 245 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 S +++ + +GYV + +L K K + + + V D+ D+ L++SDG Sbjct: 246 -SKVKESF--VIEKGYV-DIVLNKFKEKNM--IYEKDGAVWLKVSKVIDENDKVLIRSDG 299 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 +YTYF D+AY K+ RG+D + + GSDH G++ R+ A + ++ ++ +L + V Sbjct: 300 TYTYFLTDIAYHYYKFTRGYDRVYDIFGSDHHGHIPRMIAAMKLLDIDESFVHFILHQFV 359 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 L R+ +KMS RAG+FITL ++ EVG D+ R+ + L FD K +S +N Sbjct: 360 TLKRNDEIVKMSTRAGNFITLDELIKEVGKDATRYFFAMNDVNTHLIFDLELAKSKSNDN 419 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 PV+YVQYAYAR SIF +AK+ D+DF + N+ E+E E+ +I + E+ + Sbjct: 420 PVYYVQYAYARINSIFEKAKE--KDIDFKILD-NIELLENE---HEMSIIKMMDEFIHSL 473 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 P+ L Y++ L+ FH ++S + + + N+ L+ R+ L+ A+ ++ Sbjct: 474 YQVEEKLSPHYLTNYIFSLSEKFHSYYS------KYKILDEENKSLSNARMNLIFALKNV 527 Query: 570 INSGLNIIGVESPNEM 585 ++G+ +P +M Sbjct: 528 FEISFELLGISAPEKM 543 >gi|213693168|ref|YP_002323754.1| arginyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|254782943|sp|B7GNM0|SYR_BIFLI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|213524629|gb|ACJ53376.1| arginyl-tRNA synthetase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 620 Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 178/612 (29%), Positives = 313/612 (51%), Gaps = 80/612 (13%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 +D++ + RP+D AHG ++N AM L++ G+ P +AE A + + V +AG GF Sbjct: 34 VDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKPRDLAEPFAAALAEADGIAKVEVAGPGF 93 Query: 89 INLYLSPSYLRKILSSIVVSGI------------EYGRNLIGKGTKVNIEFVSANPTGPM 136 IN+ L + ++ +++ +G EYGRN G +N+EFVSANPTGP+ Sbjct: 94 INITLDSASAAAVVDTVLAAGAVTDTDKHLNKVNEYGRNAHLGGQTLNLEFVSANPTGPI 153 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--- 193 H+G R A VGD +A ++ +G +V REYY ND G QIN A S+ + +A D Sbjct: 154 HIGGTRWAAVGDAMARVLEANGAKVVREYYFNDHGEQINRFAKSLVAAWAEANNLGDAGY 213 Query: 194 -SDLPEGYYPGVYLKHVGKELADKYSSELLNFP----EEKWL-----PI----------V 233 ++ P Y G Y+ + + + S+ ++ +++ L P+ Sbjct: 214 QTETPCDGYKGAYINEIAARVQAEAESDGVDLTALAHQDQGLNDDGEPLGEADTEVREEF 273 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 + +V M I+ +K + D++ E+ + + I+ L +G +++ Sbjct: 274 RKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLYA--DGKVDAAIEELKSRGDIFD----- 326 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG---FD 350 K T F ST GDD DR ++KS+G + YFAAD+AY+ K R D Sbjct: 327 -KDGAT----------WFESTKHGDDKDRVIIKSNGEFAYFAADIAYYWDKRHRAENPAD 375 Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFIT 409 IY++G+DH GY+ R+ A+ AA ++ + + +L+ +LV + +DG P++MSKRAG+ +T Sbjct: 376 VAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQILIGQLVNVMKDGKPVRMSKRAGNVVT 435 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 + +V VG D+ R+ + ++ D D + + +NPV+YVQYA+AR +++ R A Sbjct: 436 IDDLVSVVGVDAARYSLARSDYNQNFDIDLALLASHTNDNPVYYVQYAHARSKNVDRNAA 495 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 + ++ ++ E++ +++ LA++P V+ A ++P+K+A YL +LA Sbjct: 496 --VAGISYEGADLALLDTEADG-----EVLAALAQFPSVLATAADDRQPHKVARYLEELA 548 Query: 530 SVFHGHWSHGR------ENPRLRFVQANNRKLTM----------MRLQLVHAVASIINSG 573 + +H ++ R +P R + L + RL+L AV +I +G Sbjct: 549 ATYHKWYNVERVVPMVLTDPETRGDDEARKALEIAKNPEPARAAARLKLNDAVQQVIANG 608 Query: 574 LNIIGVESPNEM 585 L+++GV +P +M Sbjct: 609 LDLLGVTAPEKM 620 >gi|23336003|ref|ZP_00121233.1| COG0018: Arginyl-tRNA synthetase [Bifidobacterium longum DJO10A] gi|189440467|ref|YP_001955548.1| arginyl-tRNA synthetase [Bifidobacterium longum DJO10A] gi|238692032|sp|B3DPJ1|SYR_BIFLD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|189428902|gb|ACD99050.1| Arginyl-tRNA synthetase [Bifidobacterium longum DJO10A] Length = 620 Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 179/614 (29%), Positives = 314/614 (51%), Gaps = 84/614 (13%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 +D++ + RP+D AHG ++N AM L++ G+ P +AE A + + V +AG GF Sbjct: 34 VDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKPRDLAEPFAAALAEADGIAKVEVAGPGF 93 Query: 89 INLYLSPSYLRKILSSIVVSGI------------EYGRNLIGKGTKVNIEFVSANPTGPM 136 IN+ L + ++ +++ +G EYGRN G +N+EFVSANPTGP+ Sbjct: 94 INITLDSASAAAVVDTVLAAGAMTDTDKHLNKVNEYGRNAHLGGQTLNLEFVSANPTGPI 153 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---- 192 H+G R A VGD +A ++ +G +V REYY ND G QIN A S+ + +A NN Sbjct: 154 HIGGTRWAAVGDAMARVLEANGAKVVREYYFNDHGEQINRFAKSLVAAWAEA--NNLGEA 211 Query: 193 --DSDLPEGYYPGVYLKHVGKELADKYSSELLNFP----EEKWL-----PI--------- 232 ++ P Y G Y+ + + + S+ ++ +++ L P+ Sbjct: 212 GYQTETPCDGYKGAYINEIAARVQAEAESDGVDLTALAHQDQGLNDDGEPLGEADTEVRE 271 Query: 233 -VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291 + +V M I+ +K + D++ E+ + + I+ L +G +++ Sbjct: 272 EFRKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLYA--DGKVDAAIEELKSRGDIFD--- 326 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG--- 348 K T F ST GDD DR ++KS+G + YFAAD+AY+ K R Sbjct: 327 ---KDGAT----------WFESTKHGDDKDRVIIKSNGEFAYFAADIAYYWDKRHRAENP 373 Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDF 407 D IY++G+DH GY+ R+ A+ AA ++ + + +L+ +LV + +DG P++MSKRAG+ Sbjct: 374 ADVAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQILIGQLVNVMKDGKPVRMSKRAGNV 433 Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467 +T+ +V VG D+ R+ + ++ D D + + +NPV+YVQYA+AR +++ R Sbjct: 434 VTIDDLVSVVGVDAARYSLARSDYNQNFDIDLALLASHTNDNPVYYVQYAHARSKNVDRN 493 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 A + ++ ++ E++ +++ LA++P V+ A ++P+K+A YL + Sbjct: 494 AA--VAGISYEGADLALLDTEADG-----EVLAALAQFPSVLATAADDRQPHKVARYLEE 546 Query: 528 LASVFHGHWSHGR------ENPRLRFVQANNRKLTM----------MRLQLVHAVASIIN 571 LA+ +H ++ R +P R + L + RL+L AV +I Sbjct: 547 LAATYHKWYNVERVVPMALTDPETRGDDEARKALEIAKNPEPARAAARLKLNDAVQQVIA 606 Query: 572 SGLNIIGVESPNEM 585 +GL+++GV +P +M Sbjct: 607 NGLDLLGVTAPEKM 620 >gi|317181661|dbj|BAJ59445.1| arginyl-tRNA synthetase [Helicobacter pylori F57] Length = 541 Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 167/558 (29%), Positives = 285/558 (51%), Gaps = 49/558 (8%) Query: 37 PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93 P+D HGH +T A L++ PL IAE + +I +F +A KG+IN L Sbjct: 22 PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISAHEKTQGLFDSVVACKGYINFTL 81 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGK-GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 S +L + + ++G + K+ +EFVSANPTGP+H+GH R AV GD+LA Sbjct: 82 SLDFLERSTQKALELKEKFGSQPKSEYSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 + F G+EV REYY+ND G+QI L LSV+ Y++ + PE +Y G Y+ + K+ Sbjct: 142 IARFLGHEVLREYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 + L EE + ++ Y+ M+ I+D+L AL I D + SE + + + Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREVFKHKDT- 260 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + + L + +YE ++ +S++ D+ DR L+K D SYT Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 Y A D+ Y K+++ + I + G+DH GY+ R++A + ++ VLL ++VRL Sbjct: 302 YLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 +D P KMSKRAG+FI ++ V+D+VG D++RF+ L ++ L+FD +K+Q NP++ Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510 Y+ YA +R ++ ++ F + I Q + + E L+ P++IE Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEILQTPLTNLNAEEKYLLFSALSLPKIIE 471 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568 ++ K+ Y LAS FH ++ G+ P+ + + L++ V+ Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILNTPKAKEL-----------LKICLMVSL 520 Query: 569 IINSGLNIIGVESPNEMS 586 +++ ++G+E ++S Sbjct: 521 SLSNAFKLLGIEIKTKIS 538 >gi|319791172|ref|YP_004152812.1| arginyL-tRNA synthetase [Variovorax paradoxus EPS] gi|315593635|gb|ADU34701.1| arginyl-tRNA synthetase [Variovorax paradoxus EPS] Length = 561 Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 182/571 (31%), Positives = 294/571 (51%), Gaps = 51/571 (8%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGK 86 + E P+ AHG ++ AAM L++PL P +AE + A + P V+++ IAG Sbjct: 26 KAAFESPKVAAHGDFASTAAMQLAKPLAKKPRELAEQLSAALLATPAFGQWVEAIEIAGP 85 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GF+N+ L + ++I+ ++ +G +G+ G KV +EFVSANPTGP+HVGH R A + Sbjct: 86 GFLNIRLKTAAKQQIVREVLAAGNTFGQQ-PATGEKVLVEFVSANPTGPLHVGHGRQAAL 144 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG----YYP 202 GD + +L A G V RE+Y NDAG QI TLA S R + D + P G Y Sbjct: 145 GDAICNLRASQGDSVWREFYYNDAGVQIQTLANSTQLR-ARGFKPGDPEWPSGEKAPAYN 203 Query: 203 GVYLKHVGKELADKYS-----SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257 G Y+ + ++ K + E + + +++++V + + DL+A ++ D Sbjct: 204 GDYIADIAEDFKAKKTVKSDDREYTASGDIDDIDSIREFAVAYLRREQDLDLQAFRVRFD 263 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 + E + + + L G YE + L +ST G Sbjct: 264 NYYLESSLYTS--GRVEAAVGKLVAAGKTYE----------------EDGALWLKSTDYG 305 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 DD DR + K DG+YTYF D+AY K+ERGF ++ + G+DH G + R+ A A E Sbjct: 306 DDKDRVMKKKDGTYTYFVPDVAYHIAKWERGFHKVVNIQGTDHHGTIARVRAGLQAAGEG 365 Query: 378 --KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435 + + +L +VR+ + G +K+SKRAG ++TLR +++ +D+VRF +L RK Sbjct: 366 IPEGYPDYVLHTMVRVMKGGEEVKISKRAGSYVTLRDLIEWTSTDAVRFFLLSRKPDTEY 425 Query: 436 DFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494 FD ++ +NPV+YVQYA+AR C + D D DL P + Sbjct: 426 TFDVDLAVTKNNDNPVYYVQYAHARICSVLAGWGGDAATLKDVDLSPLK--------SPA 477 Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554 L++ LA+YP ++ A+ P+ + FYL +LA+ +H ++ R + ++ K Sbjct: 478 AQALMLLLAKYPAMLTAASKDFAPHDVTFYLRELAASYHSYYDAER-------ILVDDEK 530 Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + RL LV A A ++++GL I+GV +PN+M Sbjct: 531 VKLARLALVAATAQVLHNGLAILGVSAPNKM 561 >gi|239620904|ref|ZP_04663935.1| arginyl-tRNA synthetase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|312133789|ref|YP_004001128.1| args [Bifidobacterium longum subsp. longum BBMN68] gi|322690014|ref|YP_004209748.1| arginyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F] gi|239516165|gb|EEQ56032.1| arginyl-tRNA synthetase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|291516548|emb|CBK70164.1| arginyl-tRNA synthetase [Bifidobacterium longum subsp. longum F8] gi|311773072|gb|ADQ02560.1| ArgS [Bifidobacterium longum subsp. longum BBMN68] gi|320461350|dbj|BAJ71970.1| arginyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F] Length = 620 Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 181/617 (29%), Positives = 314/617 (50%), Gaps = 90/617 (14%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 +D++ + RP+D AHG ++N AM L++ G+ P +AE A + + V +AG GF Sbjct: 34 VDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKPRDLAEPFAAALAEADGIAKVEVAGPGF 93 Query: 89 INLYLSPSYLRKILSSIVVSGI------------EYGRNLIGKGTKVNIEFVSANPTGPM 136 IN+ L + ++ +++ +G EYGRN G +N+EFVSANPTGP+ Sbjct: 94 INITLDSASAAAVVDTVLAAGAVTDADKHLNKVNEYGRNDHLGGQTLNLEFVSANPTGPI 153 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---- 192 H+G R A VGD +A ++ +G +V REYY ND G QIN A S+ + +A NN Sbjct: 154 HIGGTRWAAVGDAMARVLEANGAKVVREYYFNDHGEQINRFAKSLVAAWAEA--NNLGEA 211 Query: 193 --DSDLPEGYYPGVYLKHVGKELADKYSSELLNFP----EEKWL-----PI--------- 232 ++ P Y G Y+ + + + S+ ++ +++ L P+ Sbjct: 212 GYQTETPCDGYKGAYINEIAARVQAEAESDGVDLTALAHQDQGLNDDGEPLGEADTEVRE 271 Query: 233 -VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291 + +V M I+ +K + D++ E+ + + I+ L +G +++ Sbjct: 272 EFRKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLYA--DGKVDAAIEELKSRGDIFD--- 326 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF---KCKYERG 348 K T F ST GDD DR ++KS+G + YFAAD+AY+ + + E Sbjct: 327 ---KDGAT----------WFESTKHGDDKDRVIIKSNGEFAYFAADIAYYWDKRHRAENS 373 Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDF 407 D IY++G+DH GY+ R+ A+ AA ++ + + +L+ +LV + +DG P++MSKRAG+ Sbjct: 374 ADVAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQILIGQLVNVMKDGKPVRMSKRAGNV 433 Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467 +T+ +V VG D+ R+ + ++ D D + + +NPV+YVQYA+AR +++ R Sbjct: 434 VTIDDLVSVVGVDAARYSLARSDYNQNFDIDLALLASHTNDNPVYYVQYAHARSKNVDRN 493 Query: 468 AKDI---FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 A + D L ++E D +++ LA++P V+ A ++P+K+A Y Sbjct: 494 AAAAGISYEGADLALL-------DTEADG---EVLAALAQFPSVLATAADDRQPHKVARY 543 Query: 525 LYDLASVFHGHWSHGR------ENPRLRFVQANNRKLTM----------MRLQLVHAVAS 568 L +LA+ +H ++ R +P R + L + RL+L AV Sbjct: 544 LEELAATYHKWYNVERVVPMALTDPETRGDDEARKALEIAKNPEPARAAARLKLNDAVQQ 603 Query: 569 IINSGLNIIGVESPNEM 585 +I +GL+++GV +P +M Sbjct: 604 VIANGLDLLGVTAPEKM 620 >gi|296454953|ref|YP_003662097.1| arginyl-tRNA synthetase [Bifidobacterium longum subsp. longum JDM301] gi|296184386|gb|ADH01268.1| arginyl-tRNA synthetase [Bifidobacterium longum subsp. longum JDM301] Length = 684 Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 179/614 (29%), Positives = 314/614 (51%), Gaps = 84/614 (13%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 +D++ + RP+D AHG ++N AM L++ G+ P +AE A + + V +AG GF Sbjct: 98 VDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKPRDLAEPFAAALAEADGIAKVEVAGPGF 157 Query: 89 INLYLSPSYLRKILSSIVVSGI------------EYGRNLIGKGTKVNIEFVSANPTGPM 136 IN+ L + ++ +++ +G EYGRN G +N+EFVSANPTGP+ Sbjct: 158 INITLDSASAAAVVDTVLAAGAVTDTDKHLNKVNEYGRNAHLGGQTLNLEFVSANPTGPI 217 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---- 192 H+G R A VGD +A ++ +G +V REYY ND G QIN A S+ + +A NN Sbjct: 218 HIGGTRWAAVGDAMARVLEANGAKVVREYYFNDHGEQINRFAKSLVAAWAEA--NNLGEA 275 Query: 193 --DSDLPEGYYPGVYLKHVGKELADKYSSELLNFP----EEKWL-----PI--------- 232 ++ P Y G Y+ + + + S+ ++ +++ L P+ Sbjct: 276 GYQTETPCDGYKGAYINEIAARVQAEAESDGVDLTALAHQDQGLNDDGEPLGEADTEVRE 335 Query: 233 -VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291 + +V M I+ +K + D++ E+ + + I+ L +G +++ Sbjct: 336 EFRKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLYA--DGKVDAAIEELKSRGDIFD--- 390 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG--- 348 K T F ST GDD DR ++KS+G + YFAAD+AY+ K R Sbjct: 391 ---KDGAT----------WFESTKHGDDKDRVIIKSNGEFAYFAADIAYYWDKRHRAENP 437 Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDF 407 D IY++G+DH GY+ R+ A+ AA ++ + + +L+ +LV + +DG P++MSKRAG+ Sbjct: 438 ADVAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQILIGQLVNVMKDGKPVRMSKRAGNV 497 Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467 +T+ +V VG D+ R+ + ++ D D + + +NPV+YVQYA+AR +++ R Sbjct: 498 VTIDDLVSVVGVDAARYSLARSDYNQNFDIDLALLASHTNDNPVYYVQYAHARSKNVDRN 557 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 A + ++ ++ E++ +++ LA++P V+ A ++P+K+A YL + Sbjct: 558 AA--VAGISYEGADLALLDTEADG-----EVLAALAQFPSVLATAADDRQPHKVARYLEE 610 Query: 528 LASVFHGHWSHGR------ENPRLRFVQANNRKLTM----------MRLQLVHAVASIIN 571 LA+ +H ++ R +P R + L + RL+L AV +I Sbjct: 611 LAATYHKWYNVERVVPMALTDPETRGDDEARKALEIAKNPEPARAAARLKLNDAVQQVIA 670 Query: 572 SGLNIIGVESPNEM 585 +GL+++GV +P +M Sbjct: 671 NGLDLLGVTAPEKM 684 >gi|110597342|ref|ZP_01385630.1| arginyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031] gi|110341178|gb|EAT59646.1| arginyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031] Length = 552 Score = 277 bits (708), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 182/566 (32%), Positives = 296/566 (52%), Gaps = 49/566 (8%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90 I IE+P D G STN A + ++ L +P +A+ I+ + PD + + +AG GFIN Sbjct: 24 IRIEQPADKKFGDFSTNIAFLAAKELRKNPRELAQQIIPHLSFPPDTIAKIEVAGAGFIN 83 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL+P ++ + + +++ YG GKG + +E+VSANPTGP+ +G R V+GD + Sbjct: 84 FYLTPLFIMQSVEQVLLYTDRYGEGASGKGKRAIVEYVSANPTGPLTIGRGRGGVLGDCI 143 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+L A GY++TREYY NDAG Q+ L SV RY++ L + P +Y G Y++ + Sbjct: 144 ANLFATQGYDITREYYFNDAGRQMQILGESVKLRYRE-LCGQIVEFPATHYQGDYIREIA 202 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 +++ + + + L E + + K+ + + IR L+ L I+HD F +E + D Sbjct: 203 EQVFNDHGAALAGTEE---VDLFKNTAESIIFSAIRATLERLGIRHDSFFNEHTLYTPDE 259 Query: 271 SPI---RDIIDNLARQGYV--YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 + + +I+ L + ++ Y+G F +T +G + D+ L+ Sbjct: 260 TGTTANQRVIEALGEKEFISKYDG------------------ATWFMTTKLGQEKDKVLI 301 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVL 384 KS G +Y D+AY KY+RGFD ++ V G+DH Y +EA+ + E ++I + Sbjct: 302 KSTGEPSYRLPDIAYHLTKYKRGFDVIVNVFGADHIDEYPDVIEALKI-LGEDTSRIRIA 360 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 + + V DG +KMS R G+ L ++D+VG+D+ R + R L+FD K+ Sbjct: 361 INQFVTTTVDGQSVKMSTRKGNADLLDDLIDDVGADATRLFFIMRGKDSHLNFDVELAKK 420 Query: 445 QSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 QS+ENPVFY+ YA+AR S+ R AK D D D+ L P +E+QL Sbjct: 421 QSRENPVFYLHYAHARICSLLRLAKQEIGFDPHSDPDYHLLRLLDNP-------AEIQLG 473 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 L +YP +I+ + EP K+ YL+ LA +FH + +E P L+ ++ R Sbjct: 474 FALLDYPDMIKTSLRLLEPQKMVEYLHSLAELFHRFY---QECPILK----AEPEIARAR 526 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L A ++ +G I+GV +P M Sbjct: 527 LFLSLATRQVLRNGFRILGVSAPESM 552 >gi|307637012|gb|ADN79462.1| arginyl-tRNA synthetase [Helicobacter pylori 908] Length = 541 Score = 276 bits (707), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 168/571 (29%), Positives = 288/571 (50%), Gaps = 49/571 (8%) Query: 24 VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF- 82 +E+ + ++IE P+D HGH +T A L++ PL IAE + +I F Sbjct: 9 LEEVLEAEVIIEYPKDREHGHYATPIAFNLAKVFKKSPLAIAEELALKISTHKKTQGFFD 68 Query: 83 --IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVG 139 +A KG+IN LS +L + + ++G + + K+ +EFVSANPTGP+H+G Sbjct: 69 SVVACKGYINFTLSLDFLDRFTQKALELKEQFGSQVKSERSQKIFLEFVSANPTGPLHIG 128 Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199 H R AV GD+LA + F G+EV EYY+ND G+QI L LSV+ Y++ + PE Sbjct: 129 HARGAVFGDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEV 188 Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259 +Y G Y+ + K+ + L EE + ++ Y+ M+ I+ +L AL I D + Sbjct: 189 FYKGEYIIEIAKKAHNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKGNLDALGIHFDSY 248 Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319 SE + + + + + L R +YE ++ +S++ D+ Sbjct: 249 ASEREIFKHKDA----VFERLERANALYE----------------KDSKIWLKSSLYQDE 288 Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 DR L+K D SYTY A D+ Y K+++ + I + G+DH GY+ R++A + Sbjct: 289 SDRVLIKEDKSYTYLAGDIVYHDEKFQQNYTKYINIWGADHHGYIARVKASLEFLGYDSN 348 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439 ++ VLL ++VRL +D P KMSKRAG+FI ++ V+D+VG D++RF+ L ++ L+FD Sbjct: 349 KLEVLLAQMVRLLKDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDV 408 Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQ 497 +K+Q NP++Y+ YA +R ++ ++ F + I Q + E Sbjct: 409 NTLKKQDSSNPIYYIHYANSRIHTMLEKSP----------FSKEEIWQTPLKNLNAEEKY 458 Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKL 555 L+ P+ +E++ K Y LAS FH ++ G+ + P+ + + Sbjct: 459 LLFSALSLPKAVESSFEEYGLQKKCEYAKTLASEFHRFYNAGKILDTPKAKEL------- 511 Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEMS 586 L++ V+ + + ++G+E ++S Sbjct: 512 ----LKICLMVSLSLTNAFKLLGIEIKTKIS 538 >gi|317482968|ref|ZP_07941972.1| arginyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA] gi|316915575|gb|EFV36993.1| arginyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA] Length = 620 Score = 276 bits (707), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 182/617 (29%), Positives = 313/617 (50%), Gaps = 90/617 (14%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 +D++ + RP+D AHG ++N AM L++ G+ P +AE A + + V +AG GF Sbjct: 34 VDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKPRDLAEPFAAALAEADGIAKVEVAGPGF 93 Query: 89 INLYLSPSYLRKILSSIVVSGI------------EYGRNLIGKGTKVNIEFVSANPTGPM 136 IN+ L + ++ +++ +G EYGRN G +N+EFVSANPTGP+ Sbjct: 94 INITLDSASAAAVVDTVLAAGAVTDADKHLNKVNEYGRNDHLGGQTLNLEFVSANPTGPI 153 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---- 192 H+G R A VGD +A ++ +G +V REYY ND G QIN A S+ + +A NN Sbjct: 154 HIGGTRWAAVGDAMARVLEANGAKVVREYYFNDHGEQINRFAKSLVAAWAEA--NNLGEA 211 Query: 193 --DSDLPEGYYPGVYLKHVGKELADKYSSELLNFP----EEKWL-----PI--------- 232 ++ P Y G Y+ + + + S+ ++ +++ L P+ Sbjct: 212 GYQTETPCDGYKGAYINEIAARVQAEAESDGVDLTALAHQDQGLNDDGEPLGEADTEVRE 271 Query: 233 -VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291 + +V M I+ +K + D++ E+ + + I+ L +G +++ Sbjct: 272 EFRKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLYA--DGKVDAAIEELKSRGDIFD--- 326 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG--- 348 K T F ST GDD DR ++KS+G + YFAAD+AY+ K R Sbjct: 327 ---KDGAT----------WFESTKHGDDKDRVIIKSNGEFAYFAADIAYYWDKRHRAENP 373 Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDF 407 D IY++G+DH GY+ R+ A+ AA ++ + + +L+ +LV + +DG P++MSKRAG+ Sbjct: 374 ADVAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQILIGQLVNVMKDGKPVRMSKRAGNV 433 Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467 +T+ +V VG D+ R+ + ++ D D + + +NPV+YVQYA+AR +++ R Sbjct: 434 VTIDDLVSVVGVDAARYSLARSDYNQNFDIDLALLASHTNDNPVYYVQYAHARSKNVDRN 493 Query: 468 AKDI---FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 A + D L ++E D +++ LA++P V+ A ++P+K+A Y Sbjct: 494 AAAAGISYEGADLALL-------DTEADG---EVLAALAQFPSVLATAADDRQPHKVARY 543 Query: 525 LYDLASVFHGHWSHGR------ENPRLRFVQANNRKLTM----------MRLQLVHAVAS 568 L +LA+ +H ++ R +P R + L + RL+L AV Sbjct: 544 LEELAATYHKWYNVERVVPMALTDPETRGDDEARKALEIAKNPEPARAAARLKLNDAVQQ 603 Query: 569 IINSGLNIIGVESPNEM 585 +I +GL+++GV +P +M Sbjct: 604 VIANGLDLLGVTAPEKM 620 >gi|260577572|ref|ZP_05845511.1| arginine--tRNA ligase [Corynebacterium jeikeium ATCC 43734] gi|258604296|gb|EEW17534.1| arginine--tRNA ligase [Corynebacterium jeikeium ATCC 43734] Length = 551 Score = 276 bits (706), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 185/561 (32%), Positives = 283/561 (50%), Gaps = 45/561 (8%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +ERPR+ HG +TN AM +++ G +P + + +D +AG GFIN+ Sbjct: 28 TVERPRNPEHGDYATNIAMQVAKKAGTNPREFGTWLAESLGAHEGIDEATVAGPGFINIR 87 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L+ + KI+ I+ +G +G G +N+EFVSANPTGP+H+G R A VGD+L Sbjct: 88 LAAAAQGKIVEDILTAGANFGHGDELAGAAINLEFVSANPTGPIHLGGTRWAAVGDSLGR 147 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 ++ G +VTREYY ND GAQI+ A S+ + PE Y G Y++ + + Sbjct: 148 VLNARGAKVTREYYFNDHGAQIDRFARSLVAAAK------GEPTPEDGYGGDYIQDIASQ 201 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD-FHRGD-P 270 + + + + ++ + + V+ M I+ L + D++ E+ F G Sbjct: 202 IVEA-NPDWQKLGADEAQELFRSQGVELMFAHIKRTLAEFGTEFDVYFHENSLFESGAVE 260 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + I+ I DN G +YE RST GDD DR ++KSDG+ Sbjct: 261 AAIQKIKDN----GNLYEA----------------DGAWWLRSTNFGDDKDRVVIKSDGN 300 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 Y A D+AY K++RG + IY++G+DH GY+ RL A AAA+ Q+ VL+ +LV Sbjct: 301 AAYIAGDIAYVADKFDRGHNLCIYMLGADHHGYIARLRAAAAAMGYDPQQVEVLIGQLVN 360 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L +DG ++MSKRAG ITL +V+ +G D+ R+ M+ LD D +S +NP Sbjct: 361 LVKDGKAVRMSKRAGTVITLDDLVEAIGVDAARYAMIRSSVDSSLDIDMDLWASKSNDNP 420 Query: 451 VFYVQYAYARCRSIFRQAKDIF---PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 VFYVQYA+AR S+ R+A+D+ D L + E LI L E+P Sbjct: 421 VFYVQYAHARLCSLARKAEDLGVTREGADLSLLTHD----------REGDLIRTLGEFPA 470 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL---RFVQANNRKLTMMRLQLVH 564 V++ A +EP+++A Y LA FH + + P+ A N+ L RL L Sbjct: 471 VVKTAAELREPHRVARYAESLAGTFHRFYDACQILPKPSDDEQTVAENKALFAARLSLAA 530 Query: 565 AVASIINSGLNIIGVESPNEM 585 A + + L ++GV +P M Sbjct: 531 ASRQTLANALELLGVAAPERM 551 >gi|308061669|gb|ADO03557.1| arginyl-tRNA synthetase [Helicobacter pylori Cuz20] Length = 541 Score = 276 bits (705), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 166/558 (29%), Positives = 285/558 (51%), Gaps = 49/558 (8%) Query: 37 PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93 P+D HGH +T A L++ PL IAE + +I +F +A KG+IN L Sbjct: 22 PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 S +L + + ++G + K+ +EFVSANPTGP+H+GH R AV GD+LA Sbjct: 82 SLDFLERFTQKALELKEKFGSQPKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 + F G+EV EYY+ND G+QI L LSV+ Y++ + PE +Y G Y+ + K+ Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 + L EE + ++ Y+ M+ I+D+L AL I D + SE + + + Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREIFKHKDA- 260 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + + L + +YE ++ +S++ D+ DR L+K D SYT Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 Y A D+ Y K+++ + I + G+DH GY+ R++A + ++ VLL ++VRL Sbjct: 302 YLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 +D P KMSKRAG+FI ++ V+D+VG D++RF+ L ++ L+FD +K+Q NP++ Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510 Y+ YA +R ++ ++ F + I Q + + E L+ P++IE Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEILQTPLTNLNAEEKYLLFSALSLPKIIE 471 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568 ++ K+ Y LAS FH ++ G+ + P+ + + L++ V+ Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL-----------LKICLMVSL 520 Query: 569 IINSGLNIIGVESPNEMS 586 +++ ++G+E ++S Sbjct: 521 SLSNAFKLLGIEIKTKIS 538 >gi|154173779|ref|YP_001407667.1| arginyl-tRNA synthetase [Campylobacter curvus 525.92] gi|166232771|sp|A7GWS5|SYR_CAMC5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|112803557|gb|EAU00901.1| arginyl-tRNA synthetase [Campylobacter curvus 525.92] Length = 529 Score = 276 bits (705), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 174/563 (30%), Positives = 294/563 (52%), Gaps = 48/563 (8%) Query: 27 KILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP--DVDSVFI 83 KIL R V+E+P+D + H +T A L++ L P+ IA + + + +V +V Sbjct: 11 KILGRDFVLEKPKDKSLAHYATPLAFSLAKELKKSPVAIANELACKFENSKIFEVSAV-- 68 Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143 G++N L +L +I + +G ++ + IE++SANPTGP+H+GH R Sbjct: 69 --NGYLNFKLKGEFLDEISKDALKNGDKFASGKARQDGSTFIEYISANPTGPLHIGHVRG 126 Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203 AV GDTLA + GY++ EYYINDAG QI+ L S+ + L++ + + P+ YY G Sbjct: 127 AVYGDTLARIGTHLGYKIFTEYYINDAGNQIDLLGTSISLAARDVLFHENVEYPQKYYRG 186 Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 Y+ + E K+ E+ + E + L + ++ ++ II+ DL + I + SE Sbjct: 187 EYIVDIANEALKKFGKEIF-YDEARNLELA-EFGKDIVLDIIKKDLAGVGISIQGWASEK 244 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323 ++ + I+ L R +YE K T ST +GDD DR Sbjct: 245 ALYK----ELEPTIEKLKRSNQMYE------KEGAT----------YIASTTLGDDNDRV 284 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383 ++++DG TY A D+ Y K+ER +D+ I + G+DH GY+ RL+A + + ++ + Sbjct: 285 VVRNDGRPTYLAGDIIYHNDKFERNYDHYINIWGADHHGYIARLKAAIHFLGYDENRLEI 344 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443 +L ++V L +DG P KMSKRAG+ + + +V+E+GSD++RF+ + + N+ L+FD ++K Sbjct: 345 ILMQMVSLLKDGKPYKMSKRAGNAVLMSDIVEEIGSDALRFIFISKANTSSLEFDIDELK 404 Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLIVHL 502 ++ NP+FY+ YA+AR IF +A D LD L D + L+ Sbjct: 405 KEDSSNPIFYINYAHARVNQIFAKAGKSVSDVLDASL---------ENLDDNAKNLLFEA 455 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 P ++E+A +++ K++ YL LA+ FH ++ R AN L L+L Sbjct: 456 LILPEILEDAFASRQLQKVSDYLKSLAASFHKFYNENR-----VIGSANEESL----LKL 506 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 VA + + L++IG+ + + M Sbjct: 507 FAVVALSLRTALSLIGITAKDRM 529 >gi|308184122|ref|YP_003928255.1| arginyl-tRNA synthetase [Helicobacter pylori SJM180] gi|308060042|gb|ADO01938.1| arginyl-tRNA synthetase [Helicobacter pylori SJM180] Length = 541 Score = 276 bits (705), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 164/558 (29%), Positives = 285/558 (51%), Gaps = 49/558 (8%) Query: 37 PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93 P+D HGH +T A L++ PL IAE + +I +F +A KG+IN L Sbjct: 22 PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGT-KVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 S +L + + ++G + + + K+ +EFVSANPTGP+H+GH R AV GD+LA Sbjct: 82 SLDFLERFTQKALELKEKFGSQVKSEHSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 + F G+EV EYY+ND G+QI L LSV+ Y++ + PE +Y G Y+ + K+ Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 ++ L EE + ++ Y+ M+ I+D+L AL I D + SE + + + Sbjct: 202 ASNDLKPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEKEVFKHKDA- 260 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + + L + +YE ++ +S++ D+ DR L+K D SYT Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 Y A D+ Y K+++ + I + G+DH GY+ R++A + ++ VLL ++VRL Sbjct: 302 YLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 +D P KMSKRAG+FI ++ V+D+VG D++RF+ L ++ L+FD +K+Q NP++ Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510 Y+ YA +R ++ ++ F + + Q + E L+ P+ +E Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEVLQTPLKNLNAEEKYLLFSALSLPKAVE 471 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568 ++ K+ Y LAS FH ++ G+ + P+ + + L++ V+ Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL-----------LKICLMVSL 520 Query: 569 IINSGLNIIGVESPNEMS 586 + + ++G+E ++S Sbjct: 521 SLTNAFKLLGIEIKTKIS 538 >gi|239813480|ref|YP_002942390.1| arginyl-tRNA synthetase [Variovorax paradoxus S110] gi|239800057|gb|ACS17124.1| arginyl-tRNA synthetase [Variovorax paradoxus S110] Length = 561 Score = 276 bits (705), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 182/571 (31%), Positives = 293/571 (51%), Gaps = 51/571 (8%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGK 86 + E P+ AHG ++ AAM L++PLG P +AE + A + P V+++ +AG Sbjct: 26 KAAFESPKVAAHGDFASTAAMQLAKPLGRKPRELAEELSAALLATPVFGQWVEAIEVAGP 85 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GF+N+ L + ++I+ ++ +G +G+ G KV +EFVSANPTGP+HVGH R A + Sbjct: 86 GFLNIRLKTAAKQQIVREVLAAGSAFGQQ-PATGEKVLVEFVSANPTGPLHVGHGRQAAL 144 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG----YYP 202 GD + +L A G V RE+Y NDAG QI TLA S R + D + P G Y Sbjct: 145 GDAICNLRASQGDTVWREFYYNDAGVQIQTLAHSTQLR-ARGFKPGDPEWPSGEKAPAYN 203 Query: 203 GVYLKHVGKELADKYS-----SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257 G Y+ + ++ K + E L +++++V + + DL+A ++ D Sbjct: 204 GDYIADIAEDFKAKKTVKSDDREYTASGNIDDLDSIREFAVAYLRREQDLDLQAFRVRFD 263 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 + E + + + + L G YE L +ST G Sbjct: 264 NYYLESSLYTS--GRVEEAVRKLVAAGKTYE----------------QDGALWLKSTDYG 305 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA--VAAAVS 375 DD DR + K DG+YTYF D+AY K+ERGF ++ + G+DH G + R+ A AA V Sbjct: 306 DDKDRVMKKQDGTYTYFVPDVAYHIAKWERGFHKVVNIQGTDHHGTIARVRAGLQAAGVG 365 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435 + + +L +VR+ + G +K+SKRAG ++TLR +++ +D+VRF +L RK Sbjct: 366 IPEGYPDYVLHTMVRVMKGGEEVKISKRAGSYVTLRDLIEWTSTDAVRFFLLSRKPDTEY 425 Query: 436 DFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494 FD ++ +NPV+YVQYA+AR C + D D DL P + Sbjct: 426 TFDVDLAVAKNNDNPVYYVQYAHARICSVLAGWGGDATALKDVDLSPLE--------SPA 477 Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554 L++ LA+YP ++ A P+ + FYL +LA+ +H ++ R + ++ Sbjct: 478 AQALMLLLAKYPAMLTAAAKDFAPHDVTFYLRELAASYHSYYDAER-------ILVDDEP 530 Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + RL LV A A ++++GL I+GV +P++M Sbjct: 531 VKLARLALVAATAQVLHNGLAILGVSAPSKM 561 >gi|308063179|gb|ADO05066.1| arginyl-tRNA synthetase [Helicobacter pylori Sat464] Length = 541 Score = 276 bits (705), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 166/558 (29%), Positives = 285/558 (51%), Gaps = 49/558 (8%) Query: 37 PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93 P+D HGH +T A L++ PL IAE + +I +F +A KG+IN L Sbjct: 22 PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 S +L + + ++G + K+ +EFVSANPTGP+H+GH R AV GD+LA Sbjct: 82 SLDFLERFTQKALELKEKFGSQPKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 + F G+EV EYY+ND G+QI L LSV+ Y++ + PE +Y G Y+ + K+ Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 + L EE + ++ Y+ M+ I+D+L AL I D + SE + + + Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREVFKHKDA- 260 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + + L + +YE ++ +S++ D+ DR L+K D SYT Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 Y A D+ Y K+++ + I + G+DH GY+ R++A + ++ VLL ++VRL Sbjct: 302 YLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 +D P KMSKRAG+FI ++ V+D+VG D++RF+ L ++ L+FD +K+Q NP++ Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510 Y+ YA +R ++ ++ F + I Q + + E L+ P++IE Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEILQTPLTNLNAEEKYLLFSALSLPKIIE 471 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568 ++ K+ Y LAS FH ++ G+ + P+ + + L++ V+ Sbjct: 472 SSFEECGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL-----------LKICLMVSL 520 Query: 569 IINSGLNIIGVESPNEMS 586 +++ ++G+E ++S Sbjct: 521 SLSNAFKLLGIEIKTKIS 538 >gi|188527123|ref|YP_001909810.1| arginyl-tRNA synthetase [Helicobacter pylori Shi470] gi|238691899|sp|B2USE8|SYR_HELPS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|188143363|gb|ACD47780.1| arginyl-tRNA synthetase [Helicobacter pylori Shi470] Length = 541 Score = 276 bits (705), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 165/558 (29%), Positives = 286/558 (51%), Gaps = 49/558 (8%) Query: 37 PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93 P+D HGH +T A L++ PL IAE + +I +F +A KG+IN L Sbjct: 22 PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 S +L + + ++G + K+ +EFVSANPTGP+H+GH R AV GD+LA Sbjct: 82 SLDFLERFTQKALELKEKFGSQPKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 + F G+EV EYY+ND G+QI L LSV+ Y++ + PE +Y G Y+ + K+ Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 + L EE + ++ Y+ M+ I+D+L AL I D + SE + + + Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREVFKHKDA- 260 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + + L + +YE ++ +S++ D+ DR L+K D SYT Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 Y A D+ Y K+++ + I + G+DH GY+ R++A + ++ VLL ++VRL Sbjct: 302 YLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 +D P KMSKRAG+FI ++ V+D+VG D++RF+ L ++ L+FD +K+Q NP++ Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510 Y+ YA +R ++ ++ F + + Q ++ + E L+ P++IE Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEVLQTPLTDLNAEEKYLLFSALSLPKIIE 471 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568 ++ K+ Y LAS FH ++ G+ + P+ + + L++ V+ Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL-----------LKICLMVSL 520 Query: 569 IINSGLNIIGVESPNEMS 586 +++ ++G+E ++S Sbjct: 521 SLSNAFKLLGIEIKTKIS 538 >gi|317180782|dbj|BAJ58568.1| arginyl-tRNA synthetase [Helicobacter pylori F32] Length = 541 Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 166/558 (29%), Positives = 286/558 (51%), Gaps = 49/558 (8%) Query: 37 PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93 P+D HGH +T A L++ PL IAE + +I +F +A KG+IN L Sbjct: 22 PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGK-GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 S +L + + ++G + K+ +EFVSANPTGP+H+GH R AV GD+LA Sbjct: 82 SLDFLERSTQKALELKEQFGSQPKSEYSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 + F G+EV EYY+ND G+QI+ L LSV+ Y++ + PE +Y G Y+ + K+ Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIHLLGLSVWLAYREHVLQESVTYPEVFYKGEYIIEIAKK 201 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 + L EE + ++ Y+ M+ I+D+L AL I D + SE + + + Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREVFKHKDA- 260 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + + L + +YE ++ +S++ D+ DR L+K D SYT Sbjct: 261 ---VFEQLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 Y A D+ Y K+++ + I + G+DH GY+ R++A + ++ VLL ++VRL Sbjct: 302 YLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 +D P KMSKRAG+FI ++ V+D+VG D++RF+ L ++ L+FD +K+Q NP++ Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510 Y+ YA +R ++ ++ F + I Q ++ + E L+ P++IE Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEILQTPLTDLNAEEKYLLFSALSLPKIIE 471 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568 ++ K+ Y LAS FH ++ G+ P+ + + L++ V+ Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILNTPKAKEL-----------LKICLMVSL 520 Query: 569 IINSGLNIIGVESPNEMS 586 +++ ++G+E ++S Sbjct: 521 SLSNAFKLLGIEIKTKIS 538 >gi|308182491|ref|YP_003926618.1| arginyl-tRNA synthetase [Helicobacter pylori PeCan4] gi|308064676|gb|ADO06568.1| arginyl-tRNA synthetase [Helicobacter pylori PeCan4] Length = 541 Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 166/558 (29%), Positives = 285/558 (51%), Gaps = 49/558 (8%) Query: 37 PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93 P+D HGH +T A L++ PL IAE + +I F +A KG+IN L Sbjct: 22 PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGFFDSVVACKGYINFTL 81 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 S +L + + ++G + K+ +EFVSANPTGP+H+GH R AV GD+LA Sbjct: 82 SLDFLERSTQKALELKEKFGSQPKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 + F G+EV EYY+ND G+QI L LSV+ Y++ + PE +Y G Y+ + K+ Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLQESVTYPEVFYKGEYIIEIAKK 201 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 + L EE + ++ Y+ M+ I+D+L AL I D + SE + + + Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREIFKHKDA- 260 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + + L + +YE ++ +S++ D+ DR L+K D SYT Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYRDESDRVLIKEDKSYT 301 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 Y A D+ Y K+++ + I + G+DH GY+ R++A + ++ VLL ++VRL Sbjct: 302 YLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 +D P KMSKRAG+FI ++ V+D+VG D++RF+ L ++ L+FD +K+Q NP++ Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510 Y+ YA +R ++ +++ F + I Q ++ + E L+ P++IE Sbjct: 422 YIHYANSRIHTMLKKSP----------FSKEEILQTPLTDLNAEEKYLLFSALSLPKIIE 471 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568 ++ K+ Y LAS FH ++ G+ P+ + + L++ V+ Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILNTPKAKEL-----------LKICLMVSL 520 Query: 569 IINSGLNIIGVESPNEMS 586 +++ ++G+E ++S Sbjct: 521 SLSNAFKLLGIEIKTKIS 538 >gi|283956573|ref|ZP_06374052.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336] gi|283791822|gb|EFC30612.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336] Length = 530 Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 176/566 (31%), Positives = 295/566 (52%), Gaps = 53/566 (9%) Query: 26 KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84 KKIL+ +E P+D H +T A L++ L P+ IA + ++ + +SV A Sbjct: 10 KKILECDFTLENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQNHDCFESV-EA 68 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN----IEFVSANPTGPMHVGH 140 G++N +S ++L ++ + + + N KG K +E+VSANPTGP+H+GH Sbjct: 69 VNGYLNFRISKTFLNELANQALAN-----PNDFTKGEKKQESFLLEYVSANPTGPLHIGH 123 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R AV GDTL L GY+ EYY+NDAG QI L LS+ ++ + + + + PE Y Sbjct: 124 ARGAVFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQY 183 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G Y+ + KE +K+ E F EE +P + D++ M+ +I+ +L+ I+ D ++ Sbjct: 184 YKGEYIADLAKEAFEKFGKEF--FSEEN-IPSLADWAKDKMLVLIKQNLEQAKIKIDSYV 240 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE ++ + +++L + +YE ++ S+ GD+ Sbjct: 241 SERSYY----DALNATLESLKKHKGIYE----------------QEGKIWLASSQKGDEK 280 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR +++ DG TY AAD+ Y K K RG+ I + G+DH GY+ R++A + Sbjct: 281 DRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNN 340 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + ++L ++V L +DG P KMSKRAG+FI + VVDE+GSD++R++ L +K L+FD Sbjct: 341 LEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDIS 400 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLI 499 ++++ NPV+Y+ YA+AR +F +A D + DL N F+ L+ I Sbjct: 401 DLQKEDSSNPVYYINYAHARIHQVFAKAGKTIDDVMGADLQSLNQDGVNLLFEALNLKAI 460 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 + A R ++ K+ YL +LA+ FH ++ EN + N+ Sbjct: 461 LSDAFEARALQ---------KIPDYLKNLAANFHKFYN---ENKVIGSANEND------L 502 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L+L VA I + +++G+E+ N+M Sbjct: 503 LKLFSLVALSIKTAFSLMGIEAKNKM 528 >gi|47458959|ref|YP_015821.1| arginyl-tRNA synthetase [Mycoplasma mobile 163K] gi|81614400|sp|Q6KIG6|SYR_MYCMO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|47458287|gb|AAT27610.1| arginyl-tRNA synthetase [Mycoplasma mobile 163K] Length = 536 Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 182/563 (32%), Positives = 294/563 (52%), Gaps = 64/563 (11%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFI 89 ++++ +D G S+N AM+L + LG +PL IA++IV +I + ++ + I GFI Sbjct: 24 KVILTDAKDF--GDFSSNIAMVLQKDLGKNPLEIAQMIVEKINKEKFLIEKIEIVKPGFI 81 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRN----LIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 N +L + +L ++ +N + K N+E+VSANPTG +H+GH R A Sbjct: 82 NFFLDHKFYVYLLE-------KFSKNDFLIELEKTYTYNLEYVSANPTGFLHIGHARGAA 134 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205 +GDTLA+++ F+ +V REYY+NDAG QI+ LA +++ RYQQ L N +LPE Y G Sbjct: 135 IGDTLANILEFANNKVIREYYVNDAGNQISILAYALYIRYQQILGNKTLNLPEDSYHGED 194 Query: 206 LKHVGKELADKYSSELLNFPEEKWLP-IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 +K+ K KY + N + KD V+ ++ I+ DLK ++ D++ SE Sbjct: 195 IKYFAKIFHKKYQEKFKNVDYSLEVENFFKDEGVKIALEKIKLDLKTFRVEFDLYTSEKS 254 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ---LLFRSTMVGDDVD 321 + P K+ +K +Q L ++T GDD D Sbjct: 255 IY--------------------------PLIEKSLKKLKNTYEQDGALWLKTTDYGDDKD 288 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYER--GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 R L+K+DG+YTYFA DLAY K R D +I G+DH GYVKR++ K Sbjct: 289 RVLIKNDGTYTYFAPDLAYHYVKKTRSENVDYLIDFFGADHIGYVKRMQIALEQFGFSKD 348 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439 +NVL+ E+V+L ++G MSKR G I+L +++ +G D+ RF ++ +S LD + Sbjct: 349 TLNVLILEMVKLRKNGTEFVMSKRKGTAISLEDLIELIGVDNARFFLVDHSSSSKLDLEI 408 Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 + E++ N F +QYAYAR SI + K LD L + P + +F E++L+ Sbjct: 409 DLIAEKNLSNGAFIIQYAYARTNSILEKTK---VTLDVKLIRK---PFDDKF---EMKLV 459 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 L E+P +IE + + L+ YL LA F+ +S+ + + + +L ++ Sbjct: 460 NVLKEFPILIEKIAENFKIHLLSQYLITLAKSFNSFYSNSK-------IIDSEEELKLIL 512 Query: 560 LQLVHAVASIINSGLNIIGVESP 582 LV A +++ GL+++ VE+P Sbjct: 513 --LVKATQAVLKKGLDLLKVEAP 533 >gi|68536439|ref|YP_251144.1| arginyl-tRNA synthetase [Corynebacterium jeikeium K411] gi|68264038|emb|CAI37526.1| argS [Corynebacterium jeikeium K411] Length = 592 Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 185/561 (32%), Positives = 282/561 (50%), Gaps = 45/561 (8%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +ERPR+ HG +TN AM +++ G +P + + +D +AG GFIN+ Sbjct: 69 TVERPRNPEHGDYATNIAMQVAKKAGTNPREFGTWLAESLGAHEGIDEATVAGPGFINIR 128 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L+ + KI+ I+ G +G G +N+EFVSANPTGP+H+G R A VGD+L Sbjct: 129 LAAAAQGKIVEDILTVGANFGHGDELAGAAINLEFVSANPTGPIHLGGTRWAAVGDSLGR 188 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 ++ G +VTREYY ND GAQI+ A S+ + PE Y G Y++ + + Sbjct: 189 VLNARGAKVTREYYFNDHGAQIDRFARSLVAAAK------GEPTPEDGYGGDYIQDIASQ 242 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD-FHRGD-P 270 + + + + ++ + + V+ M I+ L + D++ E+ F G Sbjct: 243 IVEA-NPDWQKLGADEAQELFRSQGVELMFAHIKRTLAEFGTEFDVYFHENSLFESGAVE 301 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + I+ I DN G +YE RST GDD DR ++KSDG+ Sbjct: 302 AAIQKIKDN----GNLYEA----------------DGAWWLRSTNFGDDKDRVVIKSDGN 341 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 Y A D+AY K++RG + IY++G+DH GY+ RL A AAA+ Q+ VL+ +LV Sbjct: 342 AAYIAGDIAYVADKFDRGHNLCIYMLGADHHGYIARLRAAAAAMGYDPQQVEVLIGQLVN 401 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L +DG ++MSKRAG ITL +V+ +G D+ R+ M+ LD D +S +NP Sbjct: 402 LVKDGKAVRMSKRAGTVITLDDLVEAIGVDAARYAMIRSSVDSSLDIDMDLWASKSNDNP 461 Query: 451 VFYVQYAYARCRSIFRQAKDIF---PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 VFYVQYA+AR S+ R+A+D+ D L + E LI L E+P Sbjct: 462 VFYVQYAHARLCSLARKAEDLGVTREGADLSLLTHD----------REGDLIRTLGEFPA 511 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL---RFVQANNRKLTMMRLQLVH 564 V++ A +EP+++A Y LA FH + + P+ A N+ L RL L Sbjct: 512 VVKTAAELREPHRVARYAESLAGTFHRFYDACQILPKPSDDEQTVAENKALFAARLSLAA 571 Query: 565 AVASIINSGLNIIGVESPNEM 585 A + + L ++GV +P M Sbjct: 572 ASRQTLANALELLGVAAPERM 592 >gi|109894984|sp|Q4JUI1|SYR_CORJK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS Length = 556 Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 185/561 (32%), Positives = 282/561 (50%), Gaps = 45/561 (8%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +ERPR+ HG +TN AM +++ G +P + + +D +AG GFIN+ Sbjct: 33 TVERPRNPEHGDYATNIAMQVAKKAGTNPREFGTWLAESLGAHEGIDEATVAGPGFINIR 92 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L+ + KI+ I+ G +G G +N+EFVSANPTGP+H+G R A VGD+L Sbjct: 93 LAAAAQGKIVEDILTVGANFGHGDELAGAAINLEFVSANPTGPIHLGGTRWAAVGDSLGR 152 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 ++ G +VTREYY ND GAQI+ A S+ + PE Y G Y++ + + Sbjct: 153 VLNARGAKVTREYYFNDHGAQIDRFARSLVAAAK------GEPTPEDGYGGDYIQDIASQ 206 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD-FHRGD-P 270 + + + + ++ + + V+ M I+ L + D++ E+ F G Sbjct: 207 IVEA-NPDWQKLGADEAQELFRSQGVELMFAHIKRTLAEFGTEFDVYFHENSLFESGAVE 265 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + I+ I DN G +YE RST GDD DR ++KSDG+ Sbjct: 266 AAIQKIKDN----GNLYEA----------------DGAWWLRSTNFGDDKDRVVIKSDGN 305 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 Y A D+AY K++RG + IY++G+DH GY+ RL A AAA+ Q+ VL+ +LV Sbjct: 306 AAYIAGDIAYVADKFDRGHNLCIYMLGADHHGYIARLRAAAAAMGYDPQQVEVLIGQLVN 365 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L +DG ++MSKRAG ITL +V+ +G D+ R+ M+ LD D +S +NP Sbjct: 366 LVKDGKAVRMSKRAGTVITLDDLVEAIGVDAARYAMIRSSVDSSLDIDMDLWASKSNDNP 425 Query: 451 VFYVQYAYARCRSIFRQAKDIF---PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 VFYVQYA+AR S+ R+A+D+ D L + E LI L E+P Sbjct: 426 VFYVQYAHARLCSLARKAEDLGVTREGADLSLLTHD----------REGDLIRTLGEFPA 475 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL---RFVQANNRKLTMMRLQLVH 564 V++ A +EP+++A Y LA FH + + P+ A N+ L RL L Sbjct: 476 VVKTAAELREPHRVARYAESLAGTFHRFYDACQILPKPSDDEQTVAENKALFAARLSLAA 535 Query: 565 AVASIINSGLNIIGVESPNEM 585 A + + L ++GV +P M Sbjct: 536 ASRQTLANALELLGVAAPERM 556 >gi|171319601|ref|ZP_02908697.1| arginyl-tRNA synthetase [Burkholderia ambifaria MEX-5] gi|171095172|gb|EDT40174.1| arginyl-tRNA synthetase [Burkholderia ambifaria MEX-5] Length = 539 Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 188/568 (33%), Positives = 290/568 (51%), Gaps = 62/568 (10%) Query: 51 MILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIV 106 M L++PLG +P +AE IVA + P VD+ IAG GFINL L+ + + +++++ Sbjct: 1 MQLAKPLGTNPRQLAEKIVAALTAQPAAQGLVDAAEIAGPGFINLRLTAAAKQAVIAAVF 60 Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166 G +G + KG +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y Sbjct: 61 EQGRAFGTSEREKGKQVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFY 120 Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE------LADKYSSE 220 NDAG QI LA+S R + L D+ PE Y G Y+ + ++ +A K Sbjct: 121 YNDAGVQIGNLAISTQAR-ARGLKPGDAGWPEAAYNGEYIADIARDYLNRETVAAKDGEP 179 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280 + + L ++ ++V + DL+A ++ D + E + + +D L Sbjct: 180 VTGAGDIDDLDAIRKFAVAYLRHEQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDAL 237 Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340 + G YE L R+T GDD DR + KSDG+YTYF D+AY Sbjct: 238 IKAGMTYE----------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAY 281 Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPI 398 K+ERGF +I + GSDH G + R+ A + K + +L ++V + RDG + Sbjct: 282 HVTKWERGFTQVINIQGSDHHGTIARVRAGLQGLRIGIPKGYPDYVLHKMVTVMRDGQEV 341 Query: 399 KMSKRAGDFITLR-----------------HVVDEV----GSDSVRFMMLWRKNSELLDF 437 K+SKRAG ++T+R ++DE G D+VRF ++ RK F Sbjct: 342 KLSKRAGSYVTVRDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVF 401 Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497 D +Q+ ENPV+YVQYA+AR S+ + K + ++D P + Q + + Sbjct: 402 DIDLALKQNDENPVYYVQYAHARICSVLNELKSRY-NVDVAQLPGADLSQLTS--PQAVS 458 Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557 L+ LAEYP ++ +A P+ +AFYL DLA FH ++ R V ++ Sbjct: 459 LMQKLAEYPDMLTHAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRN 511 Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585 R L+ A ++ +GL ++GV +P +M Sbjct: 512 ARAALLAATRQVLENGLAVLGVSAPAKM 539 >gi|193213680|ref|YP_001999633.1| arginyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327] gi|229558753|sp|B3QLU7|SYR_CHLP8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|193087157|gb|ACF12433.1| arginyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327] Length = 551 Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 178/561 (31%), Positives = 288/561 (51%), Gaps = 40/561 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFIN 90 I I++P D G STN A +L++ +P +A ++ + V +AG GFIN Sbjct: 24 IQIDKPNDKKFGDFSTNIAFLLAKEARKNPRELATQLIGLFAFPEGTVTKTEVAGPGFIN 83 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +L+P++ + ++ G ++G GKG K +E+VSANPTGP+ +G R V+GD + Sbjct: 84 FHLAPAFFMRSAQEVLTQGEKFGCTESGKGQKAIVEYVSANPTGPLTIGRGRGGVLGDCI 143 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+L+ GYEVTREYY NDAG Q+ LA SV +RY + + PE +Y G Y+ + Sbjct: 144 ANLLETQGYEVTREYYFNDAGRQMQILAESVRYRYLEKC-GQTVEFPETHYQGDYIGEIA 202 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR--- 267 L ++S EL + E L I K+ + + IR L+ + I HD F +E ++ Sbjct: 203 GTLFIEHSDELASSDE---LGIFKETAEAVIFSSIRRTLERIGITHDSFFNEHTLYQWNE 259 Query: 268 GDPSPIRDIIDNLARQGYV--YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 G+ S + +ID L + ++ Y+G F +T +G + D+ L+ Sbjct: 260 GEASGNQKVIDALEAKDFIGRYDG------------------ATWFMTTKLGQEKDKVLI 301 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVL 384 KS G +Y D+AY K+ERGFD M+ V G+DH Y LEA+ + +++ + Sbjct: 302 KSSGDPSYRLPDIAYHVTKFERGFDLMVNVFGADHIDEYPDVLEAL-KILGYDASKVKIA 360 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 + + V G +KMS R G+ L ++++VG+D+ R + R L+FD K+ Sbjct: 361 INQFVTTTVGGQTVKMSTRKGNADLLDDLIEDVGADATRLFFIMRSKDSHLNFDVELAKK 420 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 QSK+NPVFY+QYA+AR S+ R A+ ++ FD E+ L L + Sbjct: 421 QSKDNPVFYLQYAHARICSLVRLAE---KEVGFDEAAATGASLPLLDSEPEIDLASALLD 477 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 +P VI++ EP K+ YL+ +A +H + +E P L+ + + RL+L Sbjct: 478 FPDVIQSCLRLLEPQKMVEYLHTVAERYHKFY---QECPILK----ADENIRTARLELSL 530 Query: 565 AVASIINSGLNIIGVESPNEM 585 V ++ +G I+G+ +P M Sbjct: 531 TVRQVLRNGFRILGISAPESM 551 >gi|315453935|ref|YP_004074205.1| arginyl-tRNA synthetase [Helicobacter felis ATCC 49179] gi|315132987|emb|CBY83615.1| arginyl-tRNA synthetase [Helicobacter felis ATCC 49179] Length = 535 Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 179/575 (31%), Positives = 303/575 (52%), Gaps = 53/575 (9%) Query: 21 KIK-VEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV 78 KIK V +++LD +IV+E P+D + GH ++ A L++ P IAE +V +K + Sbjct: 4 KIKGVLERLLDTKIVLEHPKDKSLGHYASVVAFSLAKERRKAPKIIAEELVQFLKQEQVC 63 Query: 79 DSVFI---AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGP 135 VF A G++N L S+L ++ + + G ++GRN++ IEFVSANPTGP Sbjct: 64 QEVFASISALNGYLNFTLKESFLDELCNQALSLGKDFGRNILESKKSYYIEFVSANPTGP 123 Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195 +H+GH R A+ GD+L L F G + EYY+ND GAQI+ L LSV+ R Q+ + + Sbjct: 124 LHIGHARGAIFGDSLCRLGRFLGVKTHAEYYVNDMGAQIHMLGLSVYLRIQE-MRGAQVE 182 Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255 P Y G Y+ + ++ + + + L EE + + +++ + M+ I++ L I Sbjct: 183 YPPNAYKGDYITELAQKALEHFGA--LEGEEEALIAQLGNFAKELMLAEIQETLAETGIC 240 Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315 D +ISE + S + L G VYE ++ S+ Sbjct: 241 MDAYISE----KAMFSAQERVFTRLQEAGGVYE----------------SEGKMWLASSQ 280 Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375 GD+ DR L KSD ++TY A D+ Y K+++ +D+ I + G+DH GYV R++A + Sbjct: 281 KGDEKDRVLKKSDSTFTYIAGDITYHDYKFQQNYDHYINIFGADHHGYVARIKAALEFLG 340 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435 + ++ VLL ++V L ++G P KMSKRAG+F+ L+ V+ ++G D++RF+ L +K L Sbjct: 341 YESQRLEVLLVQMVALLQEGKPYKMSKRAGNFVLLKDVLQDIGKDALRFVFLSKKLDTHL 400 Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR---NVIPQESEFD 492 +FD +++Q NP+FY+ YA AR ++ +K + + ++ N+ P + Sbjct: 401 EFDVASLQKQDSSNPIFYIHYANARIHTLM--SKFLQRGNEQAIYASSLCNLPPVATHLL 458 Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQA 550 S L L P+V+ +A + +E K+ YL +LA FH ++ R E P+ Sbjct: 459 FSALNL-------PKVLVSAFVDRELQKICEYLKNLAGDFHAFYNAHRILETPQ------ 505 Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L+L V+ + GL+++G+E+ +M Sbjct: 506 -----ELPYLKLCQMVSLSLTIGLSMLGIEAKKKM 535 >gi|86150808|ref|ZP_01069024.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94] gi|85841978|gb|EAQ59224.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94] Length = 530 Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 174/566 (30%), Positives = 294/566 (51%), Gaps = 53/566 (9%) Query: 26 KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84 KKIL+ +E P+D H +T A L++ L P+ IA + ++ + + D + A Sbjct: 10 KKILECDFALENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQ-NHDCFELVEA 68 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN----IEFVSANPTGPMHVGH 140 G++N +S ++L ++ + + + N KG K +E+VSANPTGP+H+GH Sbjct: 69 VNGYLNFRISKTFLNELANQALTN-----PNDFTKGEKKQESFLLEYVSANPTGPLHIGH 123 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R AV GDTL L GY+ EYY+NDAG QI L LS+ ++ + + + + PE Y Sbjct: 124 ARGAVFGDTLTRLARHLGYKFNTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQY 183 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G Y+ + KE +K+ E F EE +P + D++ M+ +I+ +L+ I+ D ++ Sbjct: 184 YKGEYIADLAKEAFEKFGKEF--FSEEN-IPSLADWAKDKMLVLIKQNLEQAKIKIDSYV 240 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE ++ + +++L +YE ++ S+ GD+ Sbjct: 241 SERSYY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEK 280 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR +++ DG TY AAD+ Y K K RG+ I + G+DH GY+ R++A + Sbjct: 281 DRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNN 340 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + ++L ++V L +DG P KMSKRAG+FI + VVDE+GSD++R++ L +K L+FD Sbjct: 341 LEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDIS 400 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 ++++ NPV+Y+ YA+AR +F +A K I + DL + + L+ Sbjct: 401 DLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADL---------QSLNQDGVNLL 451 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 V+ +A A+ K+ YL +LA+ FH ++ EN + N+ Sbjct: 452 FEALNLKAVLNDAFEARALQKIPDYLKNLAANFHKFYN---ENKVVGSANEND------L 502 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L+L VA I + +++G+E+ N+M Sbjct: 503 LKLFSLVALSIKTAFSLMGIEAKNKM 528 >gi|121613183|ref|YP_001000850.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176] gi|166232774|sp|A1W0F9|SYR_CAMJJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|87249269|gb|EAQ72230.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176] Length = 530 Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 173/566 (30%), Positives = 294/566 (51%), Gaps = 53/566 (9%) Query: 26 KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84 KKIL+ +E P+D H +T A L++ L P+ IA + ++ + + D + A Sbjct: 10 KKILECDFALENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQ-NHDCFELVEA 68 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN----IEFVSANPTGPMHVGH 140 G++N +S ++L ++ + + + N KG K +E+VSANPTGP+H+GH Sbjct: 69 VNGYLNFRISKTFLNELANQALTN-----PNDFTKGEKKQESFLLEYVSANPTGPLHIGH 123 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R AV GDTL L GY+ EYY+NDAG QI L LS+ ++ + + + + PE Y Sbjct: 124 ARGAVFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQY 183 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G Y+ + KE +K+ E F EE +P + D++ M+ +I+ +L+ + I+ D ++ Sbjct: 184 YKGEYIADLAKEAFEKFGKEF--FSEEN-IPSLADWAKDKMLVLIKQNLEQVKIKIDSYV 240 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE ++ + +++L +YE ++ S+ GD+ Sbjct: 241 SERSYY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEK 280 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR +++ DG TY AAD+ Y K K RG+ I + G+DH GY+ R++A + Sbjct: 281 DRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNN 340 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + ++L ++V L +DG P KMSKRAG+FI + VVDE+GSD++R++ L +K L+FD Sbjct: 341 LEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDIS 400 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLI 499 ++++ NPV+Y+ YA+AR +F +A D + DL + + L+ Sbjct: 401 DLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADL---------QSLNQDGVNLL 451 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 V+ +A A+ K+ YL +LA+ FH ++ EN + N+ Sbjct: 452 FEALNLKAVLNDAFEARALQKIPDYLKNLAANFHKFYN---ENKVVGSANEND------L 502 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L+L VA I + +++G+E+ N+M Sbjct: 503 LKLFSLVALSIKTAFSLMGIEAKNKM 528 >gi|332673163|gb|AEE69980.1| arginine--tRNA ligase [Helicobacter pylori 83] Length = 541 Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 166/558 (29%), Positives = 284/558 (50%), Gaps = 49/558 (8%) Query: 37 PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93 P+D HGH +T A L++ PL IAE + +I +F +A KG+IN L Sbjct: 22 PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 S +L + + ++G + K+ +EFVSANPTGP+H+GH R AV GD+LA Sbjct: 82 SLDFLERSTQKALELKEQFGSQPKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 + F G+EV EYY+ND G+QI+ L LSV+ Y++ + PE +Y G Y+ + K+ Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIHLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 + L EE + ++ Y+ M+ I+D+L AL I D + SE + + + Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREVFKHKDA- 260 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + + L + +YE ++ +S++ D+ DR L+K D SYT Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 Y A D+ Y K+++ + I + G+DH GY R++A + ++ VLL ++VRL Sbjct: 302 YLAGDIVYHDEKFKQNYAKYINIWGADHHGYTARVKASLEFLGYDSNKLEVLLAQMVRLL 361 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 +D P KMSKRAG+FI ++ V+D+VG D++RF+ L ++ L+FD +K+Q NP++ Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510 Y+ YA +R ++ ++ F + I Q + + E L+ P++IE Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEILQTPLTNLNAEEKYLLFSALSLPKIIE 471 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568 ++ K+ Y LAS FH ++ G+ P+ + + L++ V+ Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILNTPKAKEL-----------LKICLMVSL 520 Query: 569 IINSGLNIIGVESPNEMS 586 +++ ++G+E ++S Sbjct: 521 SLSNAFKLLGIEIKTKIS 538 >gi|217033390|ref|ZP_03438820.1| hypothetical protein HP9810_1g4 [Helicobacter pylori 98-10] gi|216944095|gb|EEC23523.1| hypothetical protein HP9810_1g4 [Helicobacter pylori 98-10] Length = 541 Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 166/558 (29%), Positives = 285/558 (51%), Gaps = 49/558 (8%) Query: 37 PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93 P+D HGH +T A L++ PL IAE + +I +F +A KG+IN L Sbjct: 22 PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGK-GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 S +L + + ++G + K+ +EFVSANPTGP+H+GH R AV GD+LA Sbjct: 82 SLDFLERSTQKALELKEQFGSQPKSEYSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 + F G+EV EYY+ND G+QI L LSV+ Y++ + PE +Y G Y+ + K+ Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWIAYREHVLQESVTYPEVFYKGEYIIEIAKK 201 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 + +L EE + ++ Y+ M+ I+D+L AL I D + SE + + + Sbjct: 202 ANNDLEPKLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREIFKHKDA- 260 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + + L + +YE ++ +S++ D+ DR L+K D SYT Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 Y A D+ Y K+++ + I + G+DH GY+ R++A + ++ VLL ++VRL Sbjct: 302 YLAGDIVYHDEKFKQNYAKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 +D P KMSKRAG+FI ++ V+D+VG D++RF+ L ++ L+FD +K+Q NP++ Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510 Y+ YA +R ++ ++ F + I Q + + E L+ P++IE Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEILQTPLTNLNAEEKYLLFSALSLPKIIE 471 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568 ++ K+ Y LAS FH ++ G+ P+ + + L++ V+ Sbjct: 472 SSFEEYGLQKICEYAKTLASEFHRFYNAGKILNTPKAKEL-----------LKICLMVSL 520 Query: 569 IINSGLNIIGVESPNEMS 586 +++ ++G+E ++S Sbjct: 521 SLSNAFKLLGIEIKTKIS 538 >gi|315124642|ref|YP_004066646.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315018364|gb|ADT66457.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 530 Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 173/566 (30%), Positives = 293/566 (51%), Gaps = 53/566 (9%) Query: 26 KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84 KKIL+ +E P+D H +T A L++ L P+ IA + ++ + + D + A Sbjct: 10 KKILECDFALENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQ-NHDCFELVEA 68 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN----IEFVSANPTGPMHVGH 140 G++N +S ++L ++ + + + N KG K +E+VSANPTGP+H+GH Sbjct: 69 VNGYLNFRISKTFLNELANQALTN-----PNDFTKGEKKQESFLLEYVSANPTGPLHIGH 123 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R AV GDTL L GY+ EYY+NDAG QI L LS+ ++ + + + + PE Y Sbjct: 124 ARGAVFGDTLTRLARHLGYKFNTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQY 183 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G Y+ + KE +K+ E F EE +P + D++ M+ +I+ +L+ I+ D ++ Sbjct: 184 YKGEYIADLAKEAFEKFGKEF--FSEEN-IPSLADWAKDKMLVLIKQNLEQAKIKIDSYV 240 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE ++ + +++L +YE ++ S+ GD+ Sbjct: 241 SERSYY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEK 280 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR +++ DG TY AAD+ Y K K RG+ I + G+DH GY+ R++A + Sbjct: 281 DRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNN 340 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + ++L ++V L +DG P KMSKRAG+FI + VVDE+GSD++R++ L +K L+FD Sbjct: 341 LEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDIS 400 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLI 499 ++++ NPV+Y+ YA+AR +F +A D + DL + + L+ Sbjct: 401 DLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADL---------QSLNQDGVNLL 451 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 V+ +A A+ K+ YL +LA+ FH ++ EN + N+ Sbjct: 452 FKALNLKAVLNDAFEARALQKIPDYLKNLAANFHKFYN---ENKVVGSANEND------L 502 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L+L VA I + +++G+E+ N+M Sbjct: 503 LKLFSLVALSIKTAFSLMGIEAKNKM 528 >gi|210134514|ref|YP_002300953.1| arginyl-tRNA synthetase [Helicobacter pylori P12] gi|238065089|sp|B6JKP5|SYR_HELP2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|210132482|gb|ACJ07473.1| arginyl-tRNA synthetase [Helicobacter pylori P12] Length = 541 Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 165/558 (29%), Positives = 282/558 (50%), Gaps = 49/558 (8%) Query: 37 PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93 P+D HGH +T A L++ PL IAE + +I +F +A KG+IN L Sbjct: 22 PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 S +L + + +G + + K+ +EFVSANPTGP+H+GH R AV GD+LA Sbjct: 82 SLDFLERFTQKALELKERFGSQIKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 + F G+EV EYY+ND G+QI L LSV+ Y++ + PE +Y G Y+ + K+ Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 + L EE + I+ Y+ M+ I+D+L AL I D + SE + + + Sbjct: 202 ANNDLEPSLFKENEETIIEILSGYAKDLMLLEIKDNLDALGIHFDSYASEKEVFKHKDA- 260 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + + L + +YE ++ +S++ D+ DR L+K D S T Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSCT 301 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 Y A D+ Y K+++ + I + G+DH GY+ R++A + ++ VLL ++VRL Sbjct: 302 YLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGHDSNKLEVLLAQMVRLL 361 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 +D P KMSKRAG+FI ++ VVD+VG D++RF+ L ++ L+FD +K+Q NP++ Sbjct: 362 KDNEPYKMSKRAGNFILIKDVVDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510 Y+ YA +R ++ ++ F + + Q + + E L+ P+ +E Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEVLQTPLTNLNAEEKYLLFSALSLPKAVE 471 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568 ++ K+ Y LAS FH ++ G+ + P+ + + L++ V+ Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL-----------LKICLMVSL 520 Query: 569 IINSGLNIIGVESPNEMS 586 + + ++G+E ++S Sbjct: 521 SLTNAFKLLGIEIKTKIS 538 >gi|218562787|ref|YP_002344566.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|81549216|sp|Q9PNC0|SYR_CAMJE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|112360493|emb|CAL35290.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 530 Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 175/566 (30%), Positives = 295/566 (52%), Gaps = 53/566 (9%) Query: 26 KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84 KKIL+ +E P+D H +T A L++ L P+ IA + ++ + +SV A Sbjct: 10 KKILECDFALENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQNHDCFESV-EA 68 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN----IEFVSANPTGPMHVGH 140 G++N +S ++L ++ + + + N KG K +E+VSANPTGP+H+GH Sbjct: 69 VNGYLNFRISKTFLNELANQALTN-----PNDFTKGEKKQESFLLEYVSANPTGPLHIGH 123 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R AV GDTL L GY+ EYY+NDAG QI L LS+ ++++ + + + PE Y Sbjct: 124 ARGAVFGDTLTRLARHLGYKFNTEYYVNDAGNQIYLLGLSILLSVKESILHENVEYPEQY 183 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G Y+ + KE +K+ E F EE +P + D++ M+ +I+ +L+ I+ D ++ Sbjct: 184 YKGEYIVDLAKEAFEKFGKEF--FSEEN-IPSLADWAKDKMLVLIKQNLEQAKIKIDSYV 240 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE ++ + +++L +YE ++ S+ GD+ Sbjct: 241 SERSYY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEK 280 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR +++ DG TY AAD+ Y K K RG+ I + G+DH GY+ R++A + Sbjct: 281 DRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNN 340 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + ++L ++V L +DG P KMSKRAG+FI + VVDE+GSD++R++ L +K L+FD Sbjct: 341 LEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDIS 400 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 ++++ NPV+Y+ YA+AR +F +A K I + DL + + L+ Sbjct: 401 DLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADL---------QSLNQDGVNLL 451 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 V+ +A A+ K+ YL +LA+ FH ++ EN + N+ Sbjct: 452 FEALNLKAVLNDAFEARALQKIPDYLKNLAANFHKFYN---ENKVVGSANEND------L 502 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L+L VA I + +++G+E+ N+M Sbjct: 503 LKLFSLVALSIKTAFSLMGIEAKNKM 528 >gi|208434266|ref|YP_002265932.1| arginyl-tRNA synthetase [Helicobacter pylori G27] gi|238065090|sp|B5ZA86|SYR_HELPG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|208432195|gb|ACI27066.1| arginyl-tRNA synthetase [Helicobacter pylori G27] Length = 541 Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 166/558 (29%), Positives = 281/558 (50%), Gaps = 49/558 (8%) Query: 37 PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93 P+D HGH +T A L++ PL IAE + +I +F +A KG+IN L Sbjct: 22 PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHKKTQGLFDSVVACKGYINFTL 81 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 S +L + + ++G + + K+ +EFVSANPTGP+H+GH R AV GD+LA Sbjct: 82 SLGFLERFTQKALELKEQFGSQIKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 + F G+EV EYY+ND G+QI L LSV+ Y++ + PE +Y G Y+ + K+ Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 + L EE + ++ Y+ M+ I+D+L AL I D + SE + + + Sbjct: 202 ANNDLEPSLFKENEETIIGVLSGYAKDLMLLEIKDNLDALGIHFDSYASEKEVFKHKDA- 260 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + + L + +YE ++ +S++ D+ DR L+K D SYT Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLVKEDKSYT 301 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 Y D+ Y K+++ + I + G+DH GY+ R++A + ++ VLL ++VRL Sbjct: 302 YLTGDVIYHDKKFKQDYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 +D P KMSKRAG+FI ++ VVD+VG D++RF+ L ++ L+FD +K+Q NP++ Sbjct: 362 KDNEPYKMSKRAGNFILIKDVVDDVGRDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510 Y+ YA +R ++ ++ F + + Q + E L+ P+ IE Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEVLQTPLKNLNAEEKYLLFSALSLPKAIE 471 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568 ++ K+ Y LAS FH ++ G+ + P+ T L++ V+ Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPK-----------TKELLKICLMVSL 520 Query: 569 IINSGLNIIGVESPNEMS 586 + + ++G+E ++S Sbjct: 521 SLTNAFKLLGIEIKTKIS 538 >gi|88596555|ref|ZP_01099792.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25] gi|88191396|gb|EAQ95368.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25] Length = 530 Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 175/566 (30%), Positives = 295/566 (52%), Gaps = 53/566 (9%) Query: 26 KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84 KKIL+ +E P+D H +T A L++ L P+ IA + ++ + + D + A Sbjct: 10 KKILECDFALENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQ-NHDCFELVEA 68 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN----IEFVSANPTGPMHVGH 140 G++N +S ++L ++ + + + N KG K +E+VSANPTGP+H+GH Sbjct: 69 VNGYLNFRISKTFLNELANQALTN-----PNDFTKGEKKQESFLLEYVSANPTGPLHIGH 123 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R AV GDTL L GY+ EYY+NDAG QI L LS+ ++ + + + + PE Y Sbjct: 124 ARGAVFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQY 183 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G Y+ + KE +K+ E F EE +P + D++ M+ +I+ +L+ I+ D ++ Sbjct: 184 YKGEYIADLAKEAFEKFGKEF--FSEEN-IPSLADWAKDKMLVLIKQNLEQAKIKIDSYV 240 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE ++ + +++L +YE ++ S+ GD+ Sbjct: 241 SERSYY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEK 280 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR +++ DG TY AAD+ Y K K RG+ I + G+DH GY+ R++A + Sbjct: 281 DRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNN 340 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + ++L ++V L +DG P KMSKRAG+FI + VVDE+GSD++R++ L +K L+FD Sbjct: 341 LEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDIS 400 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLI 499 ++++ NPV+Y+ YA+AR +F +A D + DL N F+ L+ I Sbjct: 401 DLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQSLNQDGVNLLFEALNLKAI 460 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 ++ A R ++ K+ YL +LA+ FH ++ EN + N+ Sbjct: 461 LNDAFEARALQ---------KIPDYLKNLAANFHKFYN---ENKVVGSANEND------L 502 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L+L VA I + +++G+E+ N+M Sbjct: 503 LKLFSLVALSIKTAFSLMGIEAKNKM 528 >gi|224372504|ref|YP_002606876.1| arginyl-tRNA synthetase [Nautilia profundicola AmH] gi|254782978|sp|B9L8B8|SYR_NAUPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|223588954|gb|ACM92690.1| arginyl-tRNA synthetase [Nautilia profundicola AmH] Length = 532 Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 169/511 (33%), Positives = 278/511 (54%), Gaps = 54/511 (10%) Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT-KVNIEFVSANPTGPMHVGHCR 142 A GF+N+ LS S+L + + ++ + + G G ++ +E++SANPTGP+H+GH R Sbjct: 67 AVSGFVNITLSDSFLNEFANKVLSEKENFAK---GSGKERILLEYISANPTGPLHIGHAR 123 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202 AV GD +A + GY+V EYY+NDAG QI L LSV+ ++ L D PE YY Sbjct: 124 GAVFGDAIARIGRHIGYDVVTEYYVNDAGRQITLLGLSVYLAAREIL-GLDVKWPEEYYR 182 Query: 203 GVYLKHVGKELADKYSSELL-------NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255 G Y+K + E ++ + NF ++K KD M+ +I++D+KALN+ Sbjct: 183 GEYIKDLAAEAIKEFGEDYFKAEIDAENFNDDKLNMWAKD----KMLNLIKEDIKALNVT 238 Query: 256 -HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 D ++SE + ++ +R I L + G +YE ++ +S+ Sbjct: 239 PFDNWVSEKELYK-HWDEVRAI---LEKNGALYE----------------KDGKVWLKSS 278 Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374 D+ DR +++ DG TY A D+ Y K++R +D I + G+DH GY+ R++A + Sbjct: 279 EYKDEKDRVVVREDGRPTYLAGDIIYHWDKFKRNYDRYINIWGADHHGYIARVKAAIKFL 338 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434 ++ +LL ++V+L + G P KMSKRAG+FI + VV +VG+D++RF+ L +K Sbjct: 339 GFDPEKLEILLSQMVKLLKGGEPYKMSKRAGNFILVSDVVKDVGADALRFVFLTKKADTH 398 Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494 L+FD ++ Q NP +Y+ YA+AR +SIFR + D V Q + Sbjct: 399 LEFDVDELNRQDSSNPAYYINYAHARIKSIFRNKEMNLED--------TVNIQLKDLSKD 450 Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554 E L+ ++P V+E A I +EP++L YLY+LAS FH ++ + V + ++ Sbjct: 451 EKDLVFLALQFPYVLEEAFINREPHRLTNYLYELASEFHSFYNKNK-------VIGSEKE 503 Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +RL+++ VASII GL+++G+E+ M Sbjct: 504 --EVRLKILAVVASIIKLGLSLLGIEAKERM 532 >gi|86150379|ref|ZP_01068605.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6] gi|85839204|gb|EAQ56467.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6] gi|284926399|gb|ADC28751.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902] Length = 530 Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 173/566 (30%), Positives = 293/566 (51%), Gaps = 53/566 (9%) Query: 26 KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84 KKIL+ +E P+D H +T A L++ L P+ IA + ++ + + D + A Sbjct: 10 KKILECDFALENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQ-NHDCFELVEA 68 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN----IEFVSANPTGPMHVGH 140 G++N +S ++L ++ + + + N KG K +E+VSANPTGP+H+GH Sbjct: 69 VNGYLNFRISKTFLNELANQALTN-----PNDFTKGEKKQESFLLEYVSANPTGPLHIGH 123 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R AV GDTL L GY+ EYY+NDAG QI L LS+ ++ + + + + PE Y Sbjct: 124 ARGAVFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQY 183 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G Y+ + KE +K+ E F EE +P + D++ M+ +I+ +L+ I+ D ++ Sbjct: 184 YKGEYIADLAKEAFEKFGKEF--FSEEN-IPSLADWAKDKMLVLIKQNLEQAKIKIDSYV 240 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE ++ + +++L +YE ++ S+ GD+ Sbjct: 241 SERSYY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEK 280 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR +++ DG TY AAD+ Y K K RG+ I + G+DH GY+ R++A + Sbjct: 281 DRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNN 340 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + ++L ++V L +DG P KMSKRAG+FI + VVDE+GSD++R++ L +K L+FD Sbjct: 341 LEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDIS 400 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLI 499 ++++ NPV+Y+ YA+AR +F +A D + DL + + L+ Sbjct: 401 DLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADL---------QSLNQDGVNLL 451 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 V+ +A A+ K+ YL +LA+ FH ++ EN + N+ Sbjct: 452 FEALNLKAVLNDAFEARALQKIPDYLKNLAANFHKFYN---ENKVVGSANEND------L 502 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L+L VA I + +++G+E+ N+M Sbjct: 503 LKLFSLVALSIKTAFSLMGIEAKNKM 528 >gi|108562747|ref|YP_627063.1| arginyl-tRNA synthetase [Helicobacter pylori HPAG1] gi|123373824|sp|Q1CUI3|SYR_HELPH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|107836520|gb|ABF84389.1| arginyl-tRNA synthetase [Helicobacter pylori HPAG1] Length = 541 Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 164/558 (29%), Positives = 282/558 (50%), Gaps = 49/558 (8%) Query: 37 PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93 P+D HGH +T A L++ PL IAE + +I +F +A KG+IN L Sbjct: 22 PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSIVACKGYINFTL 81 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 S L + + ++G + + K+ +EFVSANPTGP+H+GH R AV GD+LA Sbjct: 82 SLDLLERFTQKALELKEQFGSQIKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 + F G+EV EYY+ND G+QI L LSV+ Y++ + + PE +Y G Y+ + K+ Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKENVTYPEVFYKGEYIIEIAKK 201 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 + L EE + ++ Y+ M+ I+D+L AL I D + SE + + + Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEKEIFKHKDA- 260 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + + L + +YE ++ +S++ D+ DR L+K D SYT Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 Y D+ Y K+++ + I + G+DH GY+ R++A + ++ VLL ++VRL Sbjct: 302 YLTGDIVYHDEKFKQDYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 +D P KMSKRAG+FI ++ V+D+VG D++RF+ L ++ L+FD +K+Q NP++ Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510 Y+ YA +R ++ ++ F + + Q + E L+ P+ IE Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEVLQTPLKNLNAEEKYLLFSTLSLPKAIE 471 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568 ++ K+ Y LAS FH ++ G+ + P+ + + L++ V+ Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL-----------LKICLMVSL 520 Query: 569 IINSGLNIIGVESPNEMS 586 + + ++G+E ++S Sbjct: 521 SLTNAFKLLGIEIKTKIS 538 >gi|315586310|gb|ADU40691.1| arginine--tRNA ligase [Helicobacter pylori 35A] Length = 541 Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 166/558 (29%), Positives = 283/558 (50%), Gaps = 49/558 (8%) Query: 37 PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93 P+D HGH +T A L++ PL IAE + +I F +A KG+IN L Sbjct: 22 PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGFFDSVVACKGYINFTL 81 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGK-GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 S +L + + ++G + K+ +EFVSANPTGP+H+GH R AV GD+LA Sbjct: 82 SLDFLERSTQKALELKEQFGSQPKSEYSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 + F G+EV EYY+ND G+QI L LSV+ Y++ + PE +Y G Y+ + K+ Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLQESVTYPEVFYKGEYIIEIAKK 201 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 + L EE + ++ Y+ M+ I+D+L AL I D + SE + + + Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEKEVFKHKDA- 260 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + + L + +YE ++ +S++ D+ DR L+K D SYT Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 Y A D+ Y K+++ + I + G+DH GY+ R++A + ++ VLL ++VRL Sbjct: 302 YLAGDIVYHDEKFKQNYAKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 +D P KMSKRAG+FI ++ V+D+VG D++RF+ L ++ L+FD +K+Q NP++ Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510 Y+ YA +R ++ ++ F + I Q + + E L+ P++IE Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEILQTPLTNLNAEEKYLLFSALSLPKIIE 471 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568 ++ K+ Y LAS FH ++ G+ P+ + + L++ V+ Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILNTPKAKEL-----------LKICLMVSL 520 Query: 569 IINSGLNIIGVESPNEMS 586 +++ ++G+E ++S Sbjct: 521 SLSNAFKLLGIEIKTKIS 538 >gi|157415439|ref|YP_001482695.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116] gi|172047154|sp|A8FMN1|SYR_CAMJ8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|157386403|gb|ABV52718.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116] gi|307748081|gb|ADN91351.1| Arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1] gi|315932319|gb|EFV11262.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327] Length = 530 Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 175/566 (30%), Positives = 296/566 (52%), Gaps = 53/566 (9%) Query: 26 KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84 KKIL+ +E P+D H +T A L++ L P+ IA + ++ + +SV A Sbjct: 10 KKILECDFTLENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQNHDCFESV-EA 68 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN----IEFVSANPTGPMHVGH 140 G++N +S ++L ++ + + + N KG K +E+VSANPTGP+H+GH Sbjct: 69 VNGYLNFRISKTFLNELANQALAN-----PNDFSKGEKKQESFLLEYVSANPTGPLHIGH 123 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R AV GDTL L GY+ EYY+NDAG QI L LS+ ++ + + + + PE Y Sbjct: 124 ARGAVFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQY 183 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G Y+ + KE +K+ E F EE +P + D++ M+ +I+ +L+ I+ D ++ Sbjct: 184 YKGEYIADLAKEAFEKFGKEF--FSEEN-IPSLADWAKDKMLILIKQNLEQAKIKIDSYV 240 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE ++ + +++L +YE ++ S+ GD+ Sbjct: 241 SERSYY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEK 280 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR +++ DG TY AAD+ Y K K RG+ I + G+DH GY+ R++A + Sbjct: 281 DRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNN 340 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + ++L ++V L +DG P KMSKRAG+FI + V+DE+GSD++R++ L +K L+FD Sbjct: 341 LEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVIDEIGSDALRYIFLSKKCDTHLEFDIS 400 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLI 499 ++++ NPV+Y+ YA+AR +F +A D + DL N F+ L+ I Sbjct: 401 DLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMRADLQSLNQDGVNLLFEALNLKAI 460 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 ++ A R ++ K+ YL +LA+ FH ++ EN + + N+ Sbjct: 461 LNDAFEARALQ---------KIPDYLKNLAANFHKFYN---ENKVVGSINEND------L 502 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L+L VA I + +++G+E+ N+M Sbjct: 503 LKLFSLVALSIKTAFSLMGIEAKNKM 528 >gi|295104373|emb|CBL01917.1| arginyl-tRNA synthetase [Faecalibacterium prausnitzii SL3/3] Length = 604 Score = 273 bits (699), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 191/580 (32%), Positives = 297/580 (51%), Gaps = 41/580 (7%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD-SVF----I 83 L ++E P D +G +++N AM +R P IA+ ++A + P ++ SVF + Sbjct: 43 LPAFIVEIPADVKNGDIASNLAMAGARTWRKAPKMIADALLAHL---PSLENSVFSKVEV 99 Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143 AG GFINL+LS S+ ++ + EYGR GKG K N+EFVSANPTGPMH+G+ R Sbjct: 100 AGPGFINLFLSQSFWAGVVLG-ACANKEYGRTDHGKGAKYNVEFVSANPTGPMHMGNARG 158 Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYP 202 +GD LA+++ +SGY+VTRE+YINDAG QI S+ RY Q D+ LP+ Y Sbjct: 159 GALGDCLAAVLDWSGYDVTREFYINDAGNQIQKFGKSLAVRYLQQFCGEDAYPLPKECYQ 218 Query: 203 GVYLKHVGKELA----DKYSSELLNFPEE-----KWLPIVKD----YSVQAMMKIIRDDL 249 G +K + E A DKY + EE + +KD Y++ + ++ DL Sbjct: 219 GGDIKVLAGEFAELNGDKYVAACSGLSEEALFESEAFAALKDALVAYALPKNIAALKRDL 278 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY---EGILPPPKSKTTQKCDMDR 306 I +D++ E H + + ++D L G Y +G + ++ K Sbjct: 279 GKYRIDYDVWFHESTLH--ESGAVLAVVDKLLELGACYKAEDGAIMYRSAQYAAKYGTVN 336 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVK 365 K+ T + D L++++G TYFAAD+AY K RGF I V G+DH G+V Sbjct: 337 KKKTEDGTEE-EAKDEVLVRANGIPTYFAADIAYHYNKLATRGFAKAIDVWGADHHGHVA 395 Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425 R++ A+ ++V+L ++V L RDG P++MSKR G+ ITL +++EV DS RF+ Sbjct: 396 RMKGAMDAIGLHGEDLDVVLMQMVNLMRDGQPVRMSKRTGNAITLTDLLEEVPIDSARFL 455 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 +DFD + + +NPV+YVQYA+AR SI ++ + I Sbjct: 456 FNMHDAGSGIDFDLDQAVKTDNDNPVYYVQYAHARICSILKKME----SEGVQFAGAEHI 511 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 + SE+ LI LA +P+ I A +P ++ ++ DLAS FH + + R Sbjct: 512 DATLLTEPSEMDLIRMLAAFPQEIVMAAEKYDPSRINRFVIDLASAFHRFYGNCR----- 566 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +Q + + RL L V ++I + L + + P +M Sbjct: 567 --IQGADPAVQQARLALCIGVKNVIFNVLTMFKINVPEKM 604 >gi|261839171|gb|ACX98936.1| arginyl-tRNA synthetase [Helicobacter pylori 52] Length = 541 Score = 273 bits (699), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 166/558 (29%), Positives = 284/558 (50%), Gaps = 49/558 (8%) Query: 37 PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93 P+D HGH +T A L++ PL IAE + +I +F +A KG+IN L Sbjct: 22 PKDREHGHYATPIAFNLAKVFKKSPLIIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGK-GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 S +L + + ++G + K+ +EFVSANPTGP+H+GH R AV GD+LA Sbjct: 82 SLDFLERSTQKALELKEKFGSQPKSEYSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 + F G+EV EYY+ND G+QI L LSV+ Y++ + PE +Y G Y+ + K+ Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLQESVTYPEVFYKGEYIIEIAKK 201 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 + L EE + ++ Y+ M+ I+D+L AL I D + SE + + + Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREIFKHKDA- 260 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + + L + +YE ++ +S++ D+ DR L+K D SYT Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 Y A D+ Y K+++ + I + G+DH GY+ R++A + ++ VLL ++VRL Sbjct: 302 YLAGDIVYHDEKFKQNYAKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 +D P KMSKRAG+FI ++ V+D+VG D++RF+ L ++ L+FD +K+Q NP++ Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510 Y+ YA +R ++ ++ F + I Q + + E L+ P++IE Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEILQTPLTHLNAEEKYLLFSALSLPKIIE 471 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568 ++ K+ Y LAS FH ++ G+ P+ + + L++ V+ Sbjct: 472 SSFEEYGLQKICEYAKTLASEFHRFYNAGKILNTPKAKEL-----------LKICLMVSL 520 Query: 569 IINSGLNIIGVESPNEMS 586 +++ ++G+E ++S Sbjct: 521 SLSNAFKLLGIEIKTKIS 538 >gi|86153085|ref|ZP_01071290.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843970|gb|EAQ61180.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13] Length = 530 Score = 273 bits (699), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 176/566 (31%), Positives = 295/566 (52%), Gaps = 53/566 (9%) Query: 26 KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84 KKIL+ +E P+D H +T A L++ L P+ IA + ++ + +SV A Sbjct: 10 KKILECDFALENPKDKNLAHFATPLAFSLAKGLKKSPMLIASDLASKFQNHDCFESV-EA 68 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN----IEFVSANPTGPMHVGH 140 G++N +S ++L ++ + + + N KG K +E+VSANPTGP+H+GH Sbjct: 69 VNGYLNFRISKTFLNELANQALTN-----PNDFAKGEKKQESFLLEYVSANPTGPLHIGH 123 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R AV GDTL L GY+ EYY+NDAG QI L LS+ ++ + + + + PE Y Sbjct: 124 ARGAVFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQY 183 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G Y+ + KE +K+ E F EE +P + D++ M+ +I+ +L+ I+ D ++ Sbjct: 184 YKGEYIADLAKEAFEKFGKEF--FSEEN-IPSLADWAKDKMLVLIKQNLEQAKIKIDSYV 240 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE ++ + +++L +YE ++ S+ GD+ Sbjct: 241 SERSYY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEK 280 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR +++ DG TY AAD+ Y K K RG+ I + G+DH GY+ R++A + Sbjct: 281 DRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNN 340 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + ++L ++V L +DG P KMSKRAG+FI + VVDE+GSD++R++ L +K L+FD Sbjct: 341 LEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDIS 400 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLI 499 ++++ NPV+Y+ YA+AR +F +A D + DL N F+ L+ I Sbjct: 401 DLQKEDSSNPVYYINYAHARIHQVFAKAGKKTDDVMKADLQSLNQDGVNLLFEALNLKAI 460 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 ++ A R ++ K+ YL +LA+ FH ++ EN + N+ Sbjct: 461 LNDAFEARALQ---------KIPDYLKNLAANFHKFYN---ENKVVGSANEND------L 502 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L+L VA I + +++G+E+ N+M Sbjct: 503 LKLFSLVALSIKTAFSLMGIEAKNKM 528 >gi|256384218|gb|ACU78788.1| arginine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12] gi|256385050|gb|ACU79619.1| arginine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12] gi|296455934|gb|ADH22169.1| arginine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 554 Score = 273 bits (699), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 185/584 (31%), Positives = 309/584 (52%), Gaps = 51/584 (8%) Query: 13 NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72 N LK I K+ + K+ +IE ++ G LS++ +I S+ + PL +AE+ + Sbjct: 11 NDLKNICQKLNITKEP----IIEINKNNTPGLLSSSICLISSKQVNKKPLELAEIFKQEL 66 Query: 73 KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP 132 + ++ IA GF+N+ + P L ++S+++ +YG NL + +NIE+VSANP Sbjct: 67 LLTNSYLNIDIAAPGFLNVLVKPEILSNVISNVLSLKSKYG-NLEKQNKTINIEYVSANP 125 Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192 TG +HVGH R AV+G L +L +GY V EYY+NDAG QIN LA++VF Y QAL N Sbjct: 126 TGYLHVGHARNAVIGSVLVNLFKKAGYNVQTEYYVNDAGNQINVLAVTVFVHYLQAL-NI 184 Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSEL--LNFPEEKWL-----PIVKDYSVQAMMKII 245 D+ PE Y G + + K + +KY+ + + + + K L + K S+ +KII Sbjct: 185 DAKKPENCYAGDMYEDLAKIIINKYNDQFKDIKYTDNKILDDNVHSLFKQISIDYFLKII 244 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 + L N++ + SE + + D I ++ +YE K K D Sbjct: 245 KQQLADFNVKIKHWSSEQEVY--DTHQIEKVLK-------LYES-----KDALYYKDDA- 289 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYV 364 L ++T GDD DR L+KSD +YTY DLA + +R D +I V G DH GY+ Sbjct: 290 ---LFLKTTQFGDDKDRVLVKSDKTYTYILPDLATHNLRIKRTKADKLINVWGGDHHGYI 346 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 KR++A A + + + + ++VRL +DG KMSKR G + L +++ VG D++R+ Sbjct: 347 KRMQAGLALLGNDPDILEIQMVQMVRLIKDGSEYKMSKRKGTAVWLVDILELVGVDALRY 406 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA--KDIFPDLDFDLFPR 482 M+ + ++ +D D + ++ NPV+Y QYA ARC SI QA K I P Sbjct: 407 MLASKSSNSHMDLDLDLITLKNSSNPVYYAQYATARCHSILNQAKTKKITP--------- 457 Query: 483 NVIPQESEFDT-SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 +I Q + + E++L++ L + VI+N+ + ++ Y+ ++ +FH +++ Sbjct: 458 -LIKQTNLLNNPKEIELLLILDNFKEVIKNSANNRSTQQICDYIQNICKIFHSYYA---- 512 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + N+ +LT +RL + A+ ++ + IIG++ EM Sbjct: 513 --EIKIIDENDLQLTKLRLGFIKAILQVLKNAFFIIGIQPVVEM 554 >gi|313115112|ref|ZP_07800599.1| arginyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255] gi|310622552|gb|EFQ06020.1| arginyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255] Length = 604 Score = 273 bits (699), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 190/580 (32%), Positives = 299/580 (51%), Gaps = 41/580 (7%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD-SVF----I 83 L ++E P D +G +++N AM +R P IA+ ++A + P ++ SVF + Sbjct: 43 LPAFIVEIPADTKNGDIASNIAMAGARSWRKAPKMIADALLAHL---PSIENSVFAKVEV 99 Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143 AG GFINL+L+PS+ ++ S EYGR GKG K N+EFVSANPTGPMH+G+ R Sbjct: 100 AGPGFINLFLAPSFWASVVLG-ACSNKEYGRTDHGKGAKYNVEFVSANPTGPMHMGNARG 158 Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYP 202 +GD L++++ +SGY+VTRE+YINDAG QI S+ RY Q ++ LP Y Sbjct: 159 GALGDCLSAVLDWSGYDVTREFYINDAGNQIQKFGKSLAVRYLQKYCGEEAYPLPAECYQ 218 Query: 203 GVYLKHVGKELA----DKYSSELLNFPEE-----KWLPIVKD----YSVQAMMKIIRDDL 249 G +K + E A DKY + EE + +KD Y++ + ++ DL Sbjct: 219 GGDIKVLAGEFAELNGDKYVAACKGMDEETLFESEAFAALKDALVAYALPKNIAALKRDL 278 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY---EGILPPPKSKTTQKCDMDR 306 I +D++ E H + ++ ++D L G Y +G + ++ K Sbjct: 279 GKYRIDYDVWFHESTLH--ESGAVKAVVDKLLELGACYKAEDGAIMYRSAQYAAKYGTVN 336 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVK 365 K+ T + D L++++G TYFAAD+AY K RGF I V G+DH G+V Sbjct: 337 KKKTEDGTEE-EAKDEVLVRANGIPTYFAADIAYHYNKLATRGFAKAIDVWGADHHGHVA 395 Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425 R++ A+ ++V+L ++V L RDG P++MSKR G+ ITL +++EV DS RF+ Sbjct: 396 RMKGAMDAIGLNGEDLDVVLMQMVNLMRDGQPVRMSKRTGNAITLTDLLEEVPIDSARFL 455 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 +DFD + + +NPV+YVQYA+AR SI ++ + + F + + Sbjct: 456 FNMHDAGSGIDFDLDQAVKTDNDNPVYYVQYAHARICSILKKMES--EGVQFAGAEK--V 511 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 + SE+ LI LA +P+ I A +P ++ ++ DLAS FH + R Sbjct: 512 DATLLTEPSEMDLIRMLAAFPQEIVMAAEKYDPSRINRFVIDLASAFHRFYGSCR----- 566 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +Q + + RL L V + I + L + + P +M Sbjct: 567 --IQGADPAVQQARLALCIGVKNAIFNVLTMFKINVPEKM 604 >gi|317177134|dbj|BAJ54923.1| arginyl-tRNA synthetase [Helicobacter pylori F16] Length = 541 Score = 273 bits (699), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 165/558 (29%), Positives = 283/558 (50%), Gaps = 49/558 (8%) Query: 37 PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93 P+D HGH +T A L++ PL IAE + +I +F +A KG+IN L Sbjct: 22 PKDREHGHYATPIAFNLAKVFKKSPLIIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 S +L + + +G + K+ +EFVSANPTGP+H+GH R A+ GD+LA Sbjct: 82 SLDFLERFTQKALELKERFGSQPKSERSQKIFLEFVSANPTGPLHIGHARGAMFGDSLAK 141 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 + F G+EV EYY+ND G+QI L LSV+ Y++ + PE +Y G Y+ + K+ Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWIAYREHVLKESVTYPEVFYKGEYIIEIAKQ 201 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 + L EE + ++ Y+ M+ I+D+L AL I D + SE + + + Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREIFKHKDA- 260 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + + L + +YE ++ +S++ D+ DR L+K D SYT Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 Y A D+ Y K+++ + I + G+DH GY+ R++A + ++ VLL ++VRL Sbjct: 302 YLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 +D P KMSKRAG+FI ++ V+D+VG D++RF+ L ++ L+FD +K+Q NP++ Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510 Y+ YA +R ++ ++ F + I Q + + E L+ P++IE Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEILQTPLTNLNAEEKYLLFSALSLPKIIE 471 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568 ++ K+ Y LAS FH ++ G+ P+ + + L++ V+ Sbjct: 472 SSFEEYGLQKICEYAKTLASEFHRFYNAGKILNTPKAKEL-----------LKICLMVSL 520 Query: 569 IINSGLNIIGVESPNEMS 586 +++ ++G+E ++S Sbjct: 521 SLSNAFKLLGIEIKTKIS 538 >gi|297379539|gb|ADI34426.1| arginyl-tRNA synthetase [Helicobacter pylori v225d] Length = 541 Score = 273 bits (697), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 164/558 (29%), Positives = 282/558 (50%), Gaps = 49/558 (8%) Query: 37 PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93 P+D HGH +T A L++ PL IAE + +I +F +A KG+IN L Sbjct: 22 PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGLFDSVVACKGYINFTL 81 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 S +L + + ++G + K+ +EFVSANPTGP+H+GH R AV GD+LA Sbjct: 82 SLDFLERFTQKALELKEKFGSQPKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 + F G+EV EYY+ND G+QI L LSV+ Y++ + PE +Y G Y+ + K Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKR 201 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 + L EE + ++ Y+ M+ I+D+L AL I D + SE + + + Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREIFKHKDA- 260 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + + L + +YE ++ +S++ D+ DR L+K D SYT Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 Y A D+ Y K+ + + + G+DH GY+ R++A + ++ VLL ++VRL Sbjct: 302 YLAGDIVYHDEKFRQNYTKYTNIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 +D P KMSKRAG+FI ++ V+D+VG D++RF+ L ++ L+FD +K+Q NP++ Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510 Y+ YA +R ++ ++ F + + Q + + E L+ P++IE Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEVLQTPLTNLNAEEKYLLFSALSLPKIIE 471 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568 ++ K+ Y LAS FH ++ G+ + P+ + + L++ V+ Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL-----------LKICLMVSL 520 Query: 569 IINSGLNIIGVESPNEMS 586 +++ ++G+E ++S Sbjct: 521 SLSNAFKLLGIEIKTKIS 538 >gi|317012159|gb|ADU82767.1| arginyl-tRNA synthetase [Helicobacter pylori Lithuania75] Length = 541 Score = 273 bits (697), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 165/558 (29%), Positives = 283/558 (50%), Gaps = 49/558 (8%) Query: 37 PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93 P+D HGH +T A L++ PL IAE + +I +F +A KG+IN L Sbjct: 22 PKDREHGHYATPIAFNLAKVFKKSPLIIAEELALKISTHKKTQGLFDSVVACKGYINFTL 81 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 S +L + + ++G + K+ +EFVSANPTGP+H+GH R AV GD+LA Sbjct: 82 SLDFLGRFTQKALELKEKFGSQPKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 + F G+EV EYY+ND G+QI L LSV+ Y++ + PE +Y G Y+ + K+ Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 ++ L EE + ++ Y+ M+ I+D+L AL I D + SE + + + Sbjct: 202 ASNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEKEIFKHKDA- 260 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + + L + +YE ++ +S++ D+ DR L+K D SYT Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 Y D+ Y K+++ + I + G+DH GY+ R++A + ++ VLL ++VRL Sbjct: 302 YLTGDVVYHDEKFKQDYTKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 +D P KMSKRAG+FI ++ VVD+VG D++RF+ L ++ L+FD +K+Q NP++ Sbjct: 362 KDNEPYKMSKRAGNFILIKDVVDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510 Y+ YA +R ++ ++ F + + Q + E L+ P+ IE Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEVLQTPLKNLNAEEKYLLFSALSLPKAIE 471 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568 ++ K+ Y LAS FH ++ G+ + P+ + + L++ V+ Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL-----------LKICLMVSL 520 Query: 569 IINSGLNIIGVESPNEMS 586 +++ ++G+E ++S Sbjct: 521 SLSNAFKLLGIEIKTKIS 538 >gi|42561129|ref|NP_975580.1| arginyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|81400554|sp|Q6MT14|SYR_MYCMS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|42492626|emb|CAE77222.1| arginine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320483|gb|ADK69126.1| arginine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 554 Score = 272 bits (696), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 183/585 (31%), Positives = 306/585 (52%), Gaps = 53/585 (9%) Query: 13 NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72 N LK I K+ + K+ +IE ++ G LS++ +I S+ + PL +AE+ + Sbjct: 11 NDLKNICQKLNITKEP----IIEINKNNTPGLLSSSICLISSKQVNKKPLELAEIFKQEL 66 Query: 73 KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP 132 + ++ IA GF+N+ + P L ++S+++ +YG NL + +NIE+VSANP Sbjct: 67 LLTNSYLNIDIAAPGFLNVLVKPEILSNVISNVLSLKSKYG-NLEKQNKTINIEYVSANP 125 Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192 TG +HVGH R AV+G L +L +GY V EYY+NDAG QIN LA++VF Y QAL N Sbjct: 126 TGYLHVGHARNAVIGSVLVNLFKKAGYNVQTEYYVNDAGNQINVLAVTVFVHYLQAL-NI 184 Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSEL--LNFPEEKWL-----PIVKDYSVQAMMKII 245 D+ PE Y G + K + +KY+ + + + + K L + K S+ +K+I Sbjct: 185 DAKKPENCYAGDMYDDLAKIIINKYNYQFKDIKYTDNKILDYNVHSLFKQISIDYFLKVI 244 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 + L N++ + SE + + D I ++ +YE K K D Sbjct: 245 KQQLADFNVKIKHWSSEQEVY--DTHQIEKVLK-------LYES-----KDALYYKDDA- 289 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYV 364 L ++T GDD DR L+KSD +YTY DLA + +R D +I V G DH GY+ Sbjct: 290 ---LFLKTTQFGDDKDRVLVKSDKTYTYILPDLATHNLRIKRTKADKLINVWGGDHHGYI 346 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 KR++A A + + + + ++VRL +DG KMSKR G + L +++ VG D++R+ Sbjct: 347 KRMQAGLALLGNDPDILEIQMVQMVRLIKDGSEYKMSKRKGTAVWLVDILELVGVDALRY 406 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 M+ + ++ +D D + ++ NPV+Y QYA ARC SI QA+ + + Sbjct: 407 MLASKSSNSHMDLDLDLITLKNSSNPVYYAQYATARCHSILNQAR-----------TKKI 455 Query: 485 IPQESEFDT----SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 P E + E++L++ L + VI+N+ + ++ Y+ ++ +FH +++ Sbjct: 456 TPLVKETNLLNNPKEIELLLVLDNFKEVIKNSANNRSTQQICDYIQNICKIFHSYYA--- 512 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + NN +LT +RL + AV ++ + IIG++ EM Sbjct: 513 ---EIKIIDENNLQLTKLRLGFIKAVLQVLENAFFIIGIQPVLEM 554 >gi|580993|emb|CAA38537.1| argS [Corynebacterium glutamicum] Length = 517 Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 182/553 (32%), Positives = 290/553 (52%), Gaps = 37/553 (6%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +ERPR+ HG +TN A+ +++ +G +P +A + + D +DS IAG GF+N+ L Sbjct: 1 MERPRNPEHGDYATNIALQVAKKVGQNPRDLATWLAEALAADDAIDSAEIAGPGFLNIRL 60 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + + +I++ I+ G +G + VN+EFVSANPTGP+H+G R A VGD+L + Sbjct: 61 AAAAQGEIVAKILAQGETFGNSDHLSHLDVNLEFVSANPTGPIHLGGTRWAAVGDSLGRV 120 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + SG +VTREYY ND G QI+ ALS+ + PE Y G Y+K + + + Sbjct: 121 LEASGAKVTREYYFNDHGRQIDRFALSLLAAAK------GEPTPEDGYGGEYIKEIAEAI 174 Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273 +K+ E L + + V+ M + I+ L D++ E+ + + Sbjct: 175 VEKHP-EALALEPAATQELFRAEGVEMMFEHIKSSLHEFGTDFDVYYHENSLF--ESGAV 231 Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333 + L G +YE + RST GDD DR ++KSDG Y Sbjct: 232 DKAVQVLKDNGNLYE----------------NEGAWWLRSTEFGDDKDRVVIKSDGDAAY 275 Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393 A D+AY K+ RG + IY++G+DH GY+ RL+A AAA+ K + VL+ ++V L R Sbjct: 276 IAGDIAYVADKFSRGHNLNIYMLGADHHGYIARLKAAAAALGYKPEGVEVLIGQMVNLLR 335 Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453 DG ++MSKRAG +TL +V+ +G D+ R+ ++ LD D + QS +NPV+Y Sbjct: 336 DGKAVRMSKRAGTVVTLDDLVEAIGIDAARYSLIRSSVDSSLDIDLGLWESQSSDNPVYY 395 Query: 454 VQYAYARCRSIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 VQY +AR SI R+A+ + + DL +++ + E D LI L E+P V++ A Sbjct: 396 VQYGHARLCSIARKAETLGVTEEGADL---SLLTHDREGD-----LIRTLGEFPAVVKAA 447 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572 +EP+++A Y +LA FH + P+ V + + RL L A + + Sbjct: 448 ADLREPHRIARYAEELAGTFHRFYDSCHILPK---VDEDTAPIHTARLALAAATRQTLAN 504 Query: 573 GLNIIGVESPNEM 585 L+++GV +P +M Sbjct: 505 ALHLVGVSAPEKM 517 >gi|331703585|ref|YP_004400272.1| arginyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328802140|emb|CBW54294.1| Arginyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 554 Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 185/584 (31%), Positives = 308/584 (52%), Gaps = 51/584 (8%) Query: 13 NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72 N LK I K+ + K+ +IE ++ G LS++ +I S+ + PL +AE+ + Sbjct: 11 NDLKNICQKLNITKEP----IIEINKNNTPGLLSSSICLISSKQVNKKPLELAEIFKQEL 66 Query: 73 KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP 132 + ++ IA GF+N+ + P L ++S+++ +YG NL + +NIE+VSANP Sbjct: 67 LLTNSYLNIDIAAPGFLNVLVKPEILSNVISNVLSLKSKYG-NLEKQNKTINIEYVSANP 125 Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192 TG +HVGH R AV+G L +L +GY V EYY+NDAG QIN LA++VF Y QAL N Sbjct: 126 TGYLHVGHARNAVIGSVLVNLFKKAGYNVQTEYYVNDAGNQINVLAVTVFVHYLQAL-NI 184 Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSEL--LNFPEEKWL-----PIVKDYSVQAMMKII 245 D+ PE Y G + K + +KY+ + + + + K L + K S+ +KII Sbjct: 185 DAKKPENCYAGDMYDDLAKIIINKYNDQFKDIKYTDNKILDDNVHSLFKQISIDYFLKII 244 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 + L N++ + SE + + D I ++ +YE K K D Sbjct: 245 KQQLADFNVKIKHWSSEQEVY--DTHQIEKVLK-------LYES-----KDALYYKDDA- 289 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYV 364 L ++T GDD DR L+KSD +YTY DLA + +R D +I V G DH GY+ Sbjct: 290 ---LFLKTTQFGDDKDRVLVKSDKTYTYILPDLATHNLRIKRTKADKLINVWGGDHHGYI 346 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 KR++A A + + + + ++VRL +DG KMSKR G + L +++ VG D++R+ Sbjct: 347 KRMQAGLALLGNDLDILEIQMVQMVRLIKDGSEYKMSKRKGTAVWLVDILELVGVDALRY 406 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA--KDIFPDLDFDLFPR 482 M+ + ++ +D D + ++ NPV+Y QYA ARC SI QA K I P Sbjct: 407 MLASKSSNSHMDLDLDLITLKNSSNPVYYAQYATARCHSILNQAKTKKITP--------- 457 Query: 483 NVIPQESEFDT-SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 +I Q + + E++L++ L + VI+N+ + ++ Y+ ++ +FH +++ Sbjct: 458 -LIKQTNLLNNPKEIELLLILDNFKEVIKNSANNRSTQQICDYIQNICKIFHSYYA---- 512 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + N+ +LT +RL + A+ ++ + IIG++ EM Sbjct: 513 --EIKIIDENDLQLTKLRLGFIKAILQVLKNAFFIIGIQPVVEM 554 >gi|261837760|gb|ACX97526.1| arginyl-tRNA synthetase [Helicobacter pylori 51] Length = 541 Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 165/558 (29%), Positives = 283/558 (50%), Gaps = 49/558 (8%) Query: 37 PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93 P+D HGH +T A L++ P IAE + +I +F A KG+IN L Sbjct: 22 PKDREHGHYATPIAFNLAKVFKKSPSVIAEELALKISTHEKTQGLFDSVAACKGYINFTL 81 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 S +L + + ++G + + K+ +EFVSANPTGP+H+GH R AV GD+LA Sbjct: 82 SLDFLERFTQKALELKEQFGSQIKSERSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 + F G+EV EYY+ND G+QI L LSV+ Y++ + PE +Y G Y+ + K+ Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLQESVTYPEVFYKGEYIIEIAKK 201 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 + L EE + ++ Y+ M+ I+D+L AL I D + SE + + + Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEREVFKHKDA- 260 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + + L + +YE ++ +S++ D+ DR L+K D SYT Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLKSSLYQDESDRVLIKEDKSYT 301 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 Y A D+ Y K+++ + I + G+DH GY+ R++A + ++ VLL ++VRL Sbjct: 302 YLAGDIVYHDEKFKQNYAKYINIWGADHHGYIARVKASLEFLGYDSNKLEVLLAQMVRLL 361 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 +D P KMSKRAG+FI ++ V+D+VG D++RF+ L ++ L+FD +K+Q NP++ Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNILKKQDSSNPIY 421 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510 Y+ YA +R ++ ++ F + I Q + + E L+ P++IE Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEILQTPLTNLNAEEKYLLFSALSLPKIIE 471 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568 ++ K+ Y LAS FH ++ G+ P+ + + L++ V+ Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILNTPKAKEL-----------LKICLMVSL 520 Query: 569 IINSGLNIIGVESPNEMS 586 +++ ++G+E ++S Sbjct: 521 SLSNAFKLLGIEIKTKIS 538 >gi|160944624|ref|ZP_02091851.1| hypothetical protein FAEPRAM212_02137 [Faecalibacterium prausnitzii M21/2] gi|158443808|gb|EDP20812.1| hypothetical protein FAEPRAM212_02137 [Faecalibacterium prausnitzii M21/2] Length = 616 Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 191/580 (32%), Positives = 296/580 (51%), Gaps = 41/580 (7%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD-SVF----I 83 L ++E P D +G +++N AM +R P IA+ ++A + P ++ SVF + Sbjct: 55 LPAFIVEIPADVKNGDIASNLAMAGARTWRKAPKMIADALLAHL---PSLENSVFSKVEV 111 Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143 AG GFINL+LS S+ ++ + EYGR GKG K N+EFVSANPTGPMH+G+ R Sbjct: 112 AGPGFINLFLSQSFWAGVVLG-ACANKEYGRTDHGKGAKYNVEFVSANPTGPMHMGNARG 170 Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYP 202 +GD LA+++ +SGY+VTRE+YINDAG QI S+ RY Q D+ LP+ Y Sbjct: 171 GALGDCLAAVLDWSGYDVTREFYINDAGNQIQKFGKSLAVRYLQQFCGEDAYPLPKECYQ 230 Query: 203 GVYLKHVGKELA----DKYSSELLNFPEE-----KWLPIVKD----YSVQAMMKIIRDDL 249 G +K + E A DKY + EE + +KD Y++ + ++ DL Sbjct: 231 GGDIKVLAGEFAELNGDKYVAACKGMDEEALFESEAFAALKDALVAYALPKNIAALKRDL 290 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY---EGILPPPKSKTTQKCDMDR 306 I +D++ E H + + ++D L G Y +G + ++ K Sbjct: 291 GKYRIDYDVWFHESTLH--ESGAVLAVVDKLLELGACYKAEDGAIMYRSAQYAAKYGTVN 348 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVK 365 K+ T + D L++++G TYFAAD+AY K RGF I V G+DH G+V Sbjct: 349 KKKTEDGTEE-EAKDEVLVRANGIPTYFAADIAYHYNKLATRGFAKAIDVWGADHHGHVA 407 Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425 R++ A+ ++V+L ++V L RDG P++MSKR G+ ITL +++EV DS RF+ Sbjct: 408 RMKGAMDAIGLNGEDLDVVLMQMVNLMRDGQPVRMSKRTGNAITLTDLLEEVPIDSARFL 467 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 +DFD + + +NPV+YVQYA+AR SI ++ + I Sbjct: 468 FNMHDAGSGIDFDLDQAVKTDNDNPVYYVQYAHARICSILKKME----SEGVQFAGAEHI 523 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 + SE+ LI LA +P+ I A +P ++ ++ DLAS FH + + R Sbjct: 524 DATLLTEPSEMDLIRMLAAFPQEIVMAAEKYDPSRINRFVIDLASAFHRFYGNCR----- 578 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +Q + + RL L V + I + L + + P +M Sbjct: 579 --IQGADPAVQQARLALCIGVKNAIFNVLTMFKINVPEKM 616 >gi|57238047|ref|YP_179296.1| arginyl-tRNA synthetase [Campylobacter jejuni RM1221] gi|81353486|sp|Q5HTT9|SYR_CAMJR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|57166851|gb|AAW35630.1| arginyl-tRNA synthetase [Campylobacter jejuni RM1221] gi|315058607|gb|ADT72936.1| Arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3] Length = 530 Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 172/566 (30%), Positives = 294/566 (51%), Gaps = 53/566 (9%) Query: 26 KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84 KKIL+ +E P+D H +T A L++ L P+ IA + ++ + +SV A Sbjct: 10 KKILECDFALENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQNHDCFESV-EA 68 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN----IEFVSANPTGPMHVGH 140 G++N +S ++L ++ + + + N KG K +E+VSANPTGP+H+GH Sbjct: 69 VNGYLNFRISKTFLNELANQALTN-----PNDFTKGEKKQESFLLEYVSANPTGPLHIGH 123 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R AV GDTL L GY+ EYY+NDAG QI L LS+ ++++ + + + PE Y Sbjct: 124 ARGAVFGDTLTRLARHLGYKFNTEYYVNDAGNQIYLLGLSILLSVKESILHENVEYPEQY 183 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G Y+ + KE +K+ E F +E +P + D++ M+ +I+ +L+ I+ D ++ Sbjct: 184 YKGEYIADLAKEAFEKFGKEF--FSQEN-IPSLADWAKDKMLVLIKQNLEQAKIKIDSYV 240 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE ++ + +++L +YE ++ S+ GD+ Sbjct: 241 SERSYY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEK 280 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR +++ DG TY AAD+ Y K K RG+ I + G+DH GY+ R++A + Sbjct: 281 DRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNN 340 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + ++L ++V L +DG P KMSKRAG+FI + VV+E+GSD++R++ L +K L+FD Sbjct: 341 LEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVNEIGSDALRYIFLSKKCDTHLEFDIS 400 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLI 499 ++++ NPV+Y+ YA+AR +F +A D + DL + + L+ Sbjct: 401 DLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADL---------QSLNQDGVNLL 451 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 V+ +A A+ K+ YL +LA+ FH ++ EN + N+ Sbjct: 452 FEALNLKAVLNDAFEARALQKIPDYLKNLAANFHKFYN---ENKVVGSANEND------L 502 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L+L VA I + +++G+E+ N+M Sbjct: 503 LKLFSLVALSIKTAFSLMGIEAKNKM 528 >gi|21672856|ref|NP_660921.1| arginyl-tRNA synthetase [Chlorobium tepidum TLS] gi|34222754|sp|Q8KGF3|SYR_CHLTE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|21645905|gb|AAM71263.1| arginyl-tRNA synthetase [Chlorobium tepidum TLS] Length = 551 Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 183/563 (32%), Positives = 293/563 (52%), Gaps = 44/563 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFIN 90 I I++P D G STN A ++++ +P +A ++ + + V +AG GFIN Sbjct: 24 IQIDKPNDKKFGDFSTNIAFLVAKEARKNPRELAGQLIGLLDFPEGTVTKTEVAGPGFIN 83 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +L+P++ + ++ G +G N GKG K +E+VSANPTGP+ +G R V+GD + Sbjct: 84 FHLAPAFFMRSAQEVLAKGEGFGCNESGKGLKAIVEYVSANPTGPLTIGRGRGGVLGDCI 143 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+L+ GYEVTREYY NDAG Q+ LA SV +RY + + PE +Y G Y+ + Sbjct: 144 ANLLETQGYEVTREYYFNDAGRQMQILAESVRYRYLEKC-GQVIEFPETHYQGDYIGEIA 202 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR--- 267 + L ++ L E L I K+ + + IR L+ L I HD F +E ++ Sbjct: 203 ETLFIEHGDGLAATDE---LTIFKEAAEAVIFSSIRKTLERLLITHDSFFNEHTLYQSRE 259 Query: 268 GDPSPIRDIIDNLARQGYV--YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 G PS + +ID L +G++ Y+G F +T +G + D+ L+ Sbjct: 260 GQPSANQRVIDALDAKGFIGNYDG------------------ATWFMTTKLGQEKDKVLI 301 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVL 384 KS G +Y D+AY K+ERGFD M+ V G+DH Y LEA+ + +++ + Sbjct: 302 KSSGDPSYRLPDIAYHVTKFERGFDLMVNVFGADHIDEYPDVLEAL-KILGYDTSKVKIA 360 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 + + V G +KMS R G+ L ++D+VG+D+ R + R L+FD K+ Sbjct: 361 INQFVTTTVGGQTVKMSTRKGNADLLDDLIDDVGADATRLFFIMRGKDSHLNFDVELAKK 420 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS--ELQLIVHL 502 QSK+NPVFY+QYA+AR S+ R A+ ++ FD I +S E+ L L Sbjct: 421 QSKDNPVFYLQYAHARICSLVRMAEK---EVGFD--EATAIGAGLPLLSSEPEIDLASAL 475 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 ++P +I+++ EP K+ YL+ +A +H + +E P L+ + L RL+L Sbjct: 476 LDFPDIIQSSLRQLEPQKMVEYLHTVAERYHKFY---QECPILK----ADEHLRTARLEL 528 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 AV ++ +G I+G+ +P M Sbjct: 529 SLAVRQVLRNGFKILGISAPESM 551 >gi|295100375|emb|CBK97920.1| arginyl-tRNA synthetase [Faecalibacterium prausnitzii L2-6] Length = 604 Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 191/586 (32%), Positives = 298/586 (50%), Gaps = 53/586 (9%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS-----VFI 83 L ++E P D +G +++N AM +R P IA+ ++A + P +D V + Sbjct: 43 LPAFIVEIPADVKNGDIASNIAMAGARTWRKAPKMIADALIAHL---PALDGGVFAKVEV 99 Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143 AG GFINL+L+PS+ ++ S EYGR GKG K N+EFVSANPTGPMH+G+ R Sbjct: 100 AGPGFINLFLAPSFWAGVVLG-ACSNKEYGRTDHGKGAKYNVEFVSANPTGPMHMGNARG 158 Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYP 202 +GD LA+++ +SG +VTRE+YINDAG QI S+ RY Q ++ LP Y Sbjct: 159 GALGDCLAAVLDWSGCDVTREFYINDAGNQIQKFGKSLAVRYLQKYCGEEAYPLPAECYQ 218 Query: 203 GVYLKHVGKELA----DKYSSELLNFPEE-----KWLPIVKD----YSVQAMMKIIRDDL 249 G +K + E A DKY++ EE + +KD Y++ + ++ DL Sbjct: 219 GGDIKVLAGEFAELNGDKYAASCKGMDEETLFESEAFAALKDALVAYALPKNIAALKRDL 278 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY---EGILPPPKSKTTQKCDMDR 306 I +D++ E H + + ++D L G Y +G + ++ K Sbjct: 279 SKYRIDYDVWFHESTLH--ESGAVLAVVDKLLELGACYKAEDGAVMYRSAQYAAKYGTVN 336 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVK 365 K+ T + D L++++G TYFAAD+AY K RGF I V G+DH G+V Sbjct: 337 KKKTDDGTEE-EAKDEVLVRANGIPTYFAADIAYHYNKLATRGFAKAIDVWGADHHGHVA 395 Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425 R++ A+ ++V+L ++V L RDG P++MSKR G+ ITL +++EV DS RF+ Sbjct: 396 RMKGAMDAIGLHGEDLDVVLMQMVNLMRDGQPVRMSKRTGNAITLTDLLEEVPIDSARFL 455 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFP---DLDFDL 479 +DFD + + +NPV+YVQYA+AR SI ++ + F ++D L Sbjct: 456 FNMHDAGSGIDFDLDQAVKTDNDNPVYYVQYAHARICSILKKMESEGVAFAGAENIDATL 515 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + SE+ LI LA +P+ I A +P ++ ++ DLAS FH + Sbjct: 516 LT----------EPSEMDLIRMLAAFPQEIVMAAEKYDPSRINRFVIDLASAFHRFYGSC 565 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +Q + + RL L V ++I + L + + P +M Sbjct: 566 R-------IQGADPAVQQARLALCIGVKNVIFNVLTMFKINVPEKM 604 >gi|239617808|ref|YP_002941130.1| arginyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1] gi|239506639|gb|ACR80126.1| arginyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1] Length = 542 Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 186/546 (34%), Positives = 277/546 (50%), Gaps = 41/546 (7%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G STN A +L++ L P IAE + R V V +AG GFIN L+ S RK L Sbjct: 35 GDYSTNVAFLLTKKLRKSPKMIAEELSGRFSELEYVLKVTVAGPGFINFVLNDSIYRKSL 94 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 IV + + + T + EF SANPTGP +GH R + GD L ++ GY V Sbjct: 95 FHIVDNPRFWEKE---GDTLIQFEFGSANPTGPYTIGHGRQLIFGDVLCNVFQARGYRVH 151 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222 RE YINDAG QI L S++ RY + L+ + +LPE Y G YL + +EL Y + Sbjct: 152 REMYINDAGRQIKLLGRSLWVRYNE-LFGKEYELPEDGYRGEYLIDLAEELKISYGDRFV 210 Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282 + + + K Y+V +M+ +++ L+ L + D + SE D + +I+ Sbjct: 211 DRWDSEIEEFFKSYAVGKIMEGMKESLERLGMSFDNYFSEKSLV--DDGSVEEILRKFDE 268 Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQ--LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340 G Y RK L F + DD D+ L++SDG+YTYF D+AY Sbjct: 269 MGLTY------------------RKDGALWFAVSKFVDDDDKVLVRSDGTYTYFLTDIAY 310 Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400 KY+RG+ + G+DH G++ R+ A A+ + ++ + V + R G IKM Sbjct: 311 HYNKYKRGYRRAYDIWGADHMGHIPRMRAAMKALGIADDFLYFIIHQYVNIKRGGEVIKM 370 Query: 401 SKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459 S R G F TL +V+ VG D+ R F ++ ++ +L FD K+++ ENPVFYVQYA+A Sbjct: 371 STRKGQFSTLDELVESVGKDATRYFFAMFDPDTHML-FDIDLAKKKNNENPVFYVQYAHA 429 Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 R SIFR A LD IP E + E +LI L +P +++ T + Sbjct: 430 RIASIFRTASQRGMKLD------TRIP-EVLMNEEEKRLIKQLGNFPEILDQITEDYKTN 482 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 +L YL LA FH ++ + V A++ +L+M RL L AV ++++ GL++IGV Sbjct: 483 RLTNYLESLAGAFHAFYN------KHVVVDADSPELSMFRLTLCKAVKNVLSDGLSLIGV 536 Query: 580 ESPNEM 585 +P M Sbjct: 537 SAPESM 542 >gi|313665274|ref|YP_004047145.1| arginine--tRNA ligase [Mycoplasma leachii PG50] gi|312949800|gb|ADR24396.1| arginine--tRNA ligase [Mycoplasma leachii PG50] Length = 554 Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 181/563 (32%), Positives = 298/563 (52%), Gaps = 45/563 (7%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IE ++ G LS++ +I S+ + PL +A ++ + + S+ IA GF+N+ Sbjct: 27 IIEINKNNTPGLLSSSICLISSKQVNKKPLDLANDFKEQLLLTNNYSSIQIASPGFLNVL 86 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 + P L ++++++ +YG NL + +NIE+VSANPTG +HVGH R AV+G L + Sbjct: 87 VKPEILSSVINNVLSLKSKYG-NLEKQNKTINIEYVSANPTGYLHVGHARNAVIGSVLVN 145 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 L +GY+V EYY+NDAG QIN LA++VF Y QAL N D+ PE Y G + K Sbjct: 146 LFKKAGYKVQTEYYVNDAGNQINVLAVTVFVHYLQAL-NIDAKKPENCYAGDMYDDLAKI 204 Query: 213 LADKYSSEL--LNFPEEKWL-----PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 + +KY+ + +N+ + K L + K S+ +KII+ L N++ + SE + Sbjct: 205 IINKYNDQFKDINYTDNKILDDYVHSLFKQISIDYFLKIIKQQLADFNVKIRHWSSEQEV 264 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 + D I E +L KSK + ++T GDD DR L+ Sbjct: 265 Y--DTHQI--------------EKVLKLYKSKDATY--YKDGAVFLKTTQFGDDKDRVLV 306 Query: 326 KSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 KSD +YTY DLA + +R D +I V G DH GY+KR++A A + + + Sbjct: 307 KSDKTYTYILPDLATHHLRIKRTKADKLINVWGGDHHGYIKRMQAGLALLGNDPDILEIQ 366 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 + ++VRL ++G KMSKR G + L +++ VG D++R+M+ + ++ +D D + Sbjct: 367 MVQMVRLIKNGSEYKMSKRKGTAVWLVDILELVGVDALRYMLASKSSNSHMDLDLDLITL 426 Query: 445 QSKENPVFYVQYAYARCRSIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 ++ NPV+Y QYA ARC SI QA K I P + N P+E+E L++ L Sbjct: 427 KNSSNPVYYAQYATARCHSILNQAKTKKITPLVKETNLLNN--PKETE-------LLLVL 477 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 + VI+N+ + ++ Y+ ++ +FH +++ ++ + NN +LT +RL Sbjct: 478 DNFKEVIKNSANNRSTQQICDYIQNICKIFHSYYA------EIKIIDENNLQLTKLRLGF 531 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 + AV ++ + IIG+E EM Sbjct: 532 IKAVLQVLKNAFFIIGIEPVIEM 554 >gi|145590156|ref|YP_001156753.1| arginyl-tRNA synthetase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048562|gb|ABP35189.1| arginyl-tRNA synthetase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 575 Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 198/586 (33%), Positives = 294/586 (50%), Gaps = 78/586 (13%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKGFI 89 +ERP+ HG ++ N A+ LS+P L+P +A+ +V ++ P + S IAG GFI Sbjct: 34 LERPKAVDHGDVACNIALQLSKPWKLNPRELAQSLVEHLQKQPGYGELIASCEIAGPGFI 93 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN--IEFVSANPTGPMHVGHCRCAVVG 147 N LS + ++S I+ SG +G+ G + IEFVSANPTGP+HVGH R A +G Sbjct: 94 NFRLSNAAKTAVVSEILGSGTHFGQLTPASGPAASAMIEFVSANPTGPLHVGHGRQAALG 153 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D LA+L+A G +V RE+Y NDAG QI LALSV R Q D PE Y G Y+ Sbjct: 154 DALANLLATQGTKVHREFYYNDAGVQIANLALSVQARL-QGFKPGDPQWPEQAYNGEYIA 212 Query: 208 HVGK--ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 + +++ Y + L ++ ++V + DLK +Q D + E Sbjct: 213 EIAAAFKVSPDYKDD---------LEAIRKFAVTYLRNEQDIDLKTFGVQFDCYYLESSL 263 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 + + I+ +L G YE L ++T GDD DR + Sbjct: 264 Y--TDGSVAQIVQDLQSIGKTYEA----------------EGALWLKTTDDGDDKDRVMR 305 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK------KA 379 KSDGS+TYF D+AY K+ RGF +I V GSDH G + R+ + V++K K Sbjct: 306 KSDGSFTYFVPDVAYHASKWNRGFQKVINVQGSDHHGTIARVRSGLQGVAQKRGWDIPKT 365 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD------------------EVGSDS 421 + +L ++V + R G +K+SKRAG ++T+R +V+ + G D+ Sbjct: 366 YPDYVLHKMVTVMRHGEEVKISKRAGSYVTVRDLVEWSGGVTSEMTPEERELALQRGRDA 425 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 VRF ++ RK FD +Q+ ENPVFYVQYA+AR SI L +D P Sbjct: 426 VRFFLISRKADTEFVFDIDLALQQNDENPVFYVQYAHARISSIL---------LQWDGKP 476 Query: 482 RNVIPQESEFDTSEL--QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 ++ + S+ L+ LAEYP V+ +A P+ LAFYL DLA FH ++ Sbjct: 477 SDLAGADLSLLQSKASDHLLRRLAEYPEVLTDAAAELAPHALAFYLRDLAGDFHTFYNAD 536 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R V ++ L + RL L+ A ++ +GL ++GV +P +M Sbjct: 537 R-------VLIDDPALKLARLALLSATRQVLQNGLRVLGVSAPAKM 575 >gi|148926180|ref|ZP_01809865.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486] gi|145845351|gb|EDK22444.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486] Length = 530 Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 172/566 (30%), Positives = 294/566 (51%), Gaps = 53/566 (9%) Query: 26 KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84 KKIL+ +E P+D H +T A L++ L P+ IA + ++ + +SV A Sbjct: 10 KKILECDFALENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQNHDCFESV-EA 68 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN----IEFVSANPTGPMHVGH 140 G++N +S ++L ++ + + + N KG K +E+VSANPTGP+H+GH Sbjct: 69 VNGYLNFRISKTFLNELANQALTN-----PNDFTKGEKKQESFLLEYVSANPTGPLHIGH 123 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R AV GDTL L GY+ EYY+NDAG QI L LS+ ++++ + + + PE Y Sbjct: 124 ARGAVFGDTLTRLARHLGYKFNTEYYVNDAGNQIYLLGLSILLSVKESILHENVEYPEQY 183 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G Y+ + KE +K+ E F EE +P + D++ M+ +I+ +L+ I+ D ++ Sbjct: 184 YKGEYIADLAKEAFEKFGKEF--FSEEN-IPSLADWAKDKMLVLIKQNLEQAKIKIDSYV 240 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE ++ + +++L +Y+ ++ S+ GD+ Sbjct: 241 SERSYY----DALNATLESLKEHKGIYK----------------QEGKIWLASSQKGDEK 280 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR +++ DG TY AAD+ Y K K RG+ I + G+DH GY+ R++A + Sbjct: 281 DRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNN 340 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + ++L ++V L +DG P KMSKRAG+FI + VV+E+GSD++R++ L +K L+FD Sbjct: 341 LEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVNEIGSDALRYIFLSKKCDTHLEFDIS 400 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLI 499 ++++ NPV+Y+ YA+AR +F +A D + DL + + L+ Sbjct: 401 DLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADL---------QSLNQDGVNLL 451 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 V+ +A A+ K+ YL +LA+ FH ++ EN + N+ Sbjct: 452 FEALNLKAVLNDAFEARALQKIPDYLKNLAANFHKFYN---ENKVVGSANEND------L 502 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L+L VA I + +++G+E+ N+M Sbjct: 503 LKLFSLVALSIKTAFSLMGIEAKNKM 528 >gi|315930154|gb|EFV09278.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305] Length = 548 Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 172/561 (30%), Positives = 295/561 (52%), Gaps = 45/561 (8%) Query: 26 KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84 KKIL+ +E P+D H +T A L++ L P+ IA + ++ + + D + A Sbjct: 10 KKILECDFALENPKDKNLAHFATPLAFSLAKELKKSPMLIASDLASKFQ-NHDCFELVEA 68 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 G++N +S ++L ++ + + + ++ + K +E+VSANPTGP+H+GH R A Sbjct: 69 VNGYLNFRISKTFLNELANQALTNPNDFTKGE-KKQESFLLEYVSANPTGPLHIGHARGA 127 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204 V GDTL L GY+ EYY+NDAG QI L LS+ ++ + + + + PE YY G Sbjct: 128 VFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQYYKGE 187 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 Y+ + KE +K+ E F EE +P + D++ M+ +I+ +L+ I+ D ++SE Sbjct: 188 YIADLAKEAFEKFGKEF--FSEEN-IPSLADWAKDKMLVLIKQNLEQAKIKIDSYVSERS 244 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 ++ + +++L +YE ++ S+ GD+ DR + Sbjct: 245 YY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEKDRVI 284 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 ++ DG TY AAD+ Y K K RG+ I + G+DH GY+ R++A + + ++ Sbjct: 285 IREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNNLEII 344 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L ++V L +DG P KMSKRAG+FI + VVDE+GSD++R++ L +K L+FD +++ Sbjct: 345 LAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDISDLQK 404 Query: 445 QSKENPVFYVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503 + NPV+Y+ YA+AR +F +A K I + DL N F+ L+ I++ A Sbjct: 405 EDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQSLNQDGVNLLFEALNLKAILNDA 464 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 R ++ K+ YL +LA+ FH ++ EN + N+ L+L Sbjct: 465 FEARALQ---------KIPDYLKNLAANFHKFYN---ENKVVGSANEND------LLKLF 506 Query: 564 HAVASIINSGLNIIGVESPNE 584 VA I + +++G+E+ N+ Sbjct: 507 SLVALSIKTAFSLMGIEAKNK 527 >gi|217031544|ref|ZP_03437049.1| hypothetical protein HPB128_21g102 [Helicobacter pylori B128] gi|298736737|ref|YP_003729267.1| arginyl-tRNA synthetase [Helicobacter pylori B8] gi|216946744|gb|EEC25340.1| hypothetical protein HPB128_21g102 [Helicobacter pylori B128] gi|298355931|emb|CBI66803.1| arginyl-tRNA synthetase [Helicobacter pylori B8] Length = 541 Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 165/558 (29%), Positives = 281/558 (50%), Gaps = 49/558 (8%) Query: 37 PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYL 93 P+D HGH +T A L++ PL IAE + +I F +A KG+IN L Sbjct: 22 PKDREHGHYATPIAFNLAKVFKKSPLVIAEELALKISTHEKTQGFFDSVVACKGYINFTL 81 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGT-KVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 S +L + + +G + + K+ +EFVSANPTGP+H+GH R AV GD+LA Sbjct: 82 SLDFLERFTQKALELKERFGSQPKSEHSQKIFLEFVSANPTGPLHIGHARGAVFGDSLAK 141 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 + F G+EV EYY+ND G+QI L LSV+ Y++ + PE +Y G Y+ + K+ Sbjct: 142 IARFLGHEVLCEYYVNDMGSQIRLLGLSVWLAYREHVLKESVTYPEVFYKGEYIIEIAKK 201 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 + L EE + ++ Y+ M+ I+D+L AL I D + SE + + + Sbjct: 202 ANNDLEPSLFKENEETIIEVLSGYAKDLMLLEIKDNLDALGIHFDSYASEKEIFKHKYA- 260 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + + L + +YE ++ RS++ D+ DR L+K D S T Sbjct: 261 ---VFERLEKANALYE----------------KDSKIWLRSSLYQDESDRVLIKEDKSCT 301 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 Y A D+ Y K+++ + I + G+DH GY+ R++A + ++ VLL ++VRL Sbjct: 302 YLAGDIVYHDEKFKQNYTKYINIWGADHHGYIARVKASLEFLGHDSNKLEVLLAQMVRLL 361 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 +D P KMSKRAG+FI ++ V+D+VG D++RF+ L ++ L+FD +K+Q NP++ Sbjct: 362 KDNEPYKMSKRAGNFILIKDVIDDVGRDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIY 421 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYPRVIE 510 Y+ YA +R ++ ++ F + + Q + + E L+ P+ IE Sbjct: 422 YIHYANSRIHTMLEKSP----------FSKEEVLQTPLTNLNAEEKYLLFSALSLPKAIE 471 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVAS 568 ++ K+ Y LAS FH ++ G+ + P+ + + L++ V+ Sbjct: 472 SSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL-----------LKICLMVSL 520 Query: 569 IINSGLNIIGVESPNEMS 586 + + ++G+E ++S Sbjct: 521 SLTNAFKLLGIEIKTKIS 538 >gi|224436874|ref|ZP_03657863.1| arginyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818] gi|313143352|ref|ZP_07805545.1| arginyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818] gi|313128383|gb|EFR46000.1| arginyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818] Length = 534 Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 166/507 (32%), Positives = 271/507 (53%), Gaps = 31/507 (6%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 IV+E+P++ GHL+T A L++ +P +AE + + +P V A GFIN Sbjct: 20 EIVLEKPKNKDLGHLATPLAFSLAKIKRQNPKLLAEELSVSLAQNPAFSKV-EALNGFIN 78 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 L LS +L I S + + +N + +EFVSANPTGP+H+GH R AV GD L Sbjct: 79 LTLSADFLFDI-SKAESTAPQSKQN----KESILLEFVSANPTGPLHIGHARGAVYGDVL 133 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + + GYE+T EYYINDAG+QI L LS+ Q+ + + PE YY G Y+ + Sbjct: 134 SRVGRHLGYEITTEYYINDAGSQIQMLGLSLLLAGQEHILKREVKYPESYYRGEYIVDLA 193 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 KE + + F E +P + D+ AM++ I+D+L + I D F+SE + Sbjct: 194 KECEKHFGKSI--FESEDSIPALADFGKNAMLQEIKDNLLQVGISFDNFVSEKALYERWN 251 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 S ++ + N GI TQ ++ S+ + D+ DR +++ G Sbjct: 252 STLQTLKQN--------NGIY-------TQDS-----KVWIASSKLNDEKDRVIVRESGE 291 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TY A D+ Y + K++RGF+ I + G+DH GY++R++A + + ++ VLL ++V Sbjct: 292 PTYLAGDIIYHQDKFQRGFERYINIWGADHHGYIQRVKAAIHFLGYDENKLEVLLSQMVS 351 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L + G P KMSKRAG+FI ++ V E+GSD++RF+ L +K L+FD ++K+Q NP Sbjct: 352 LLKGGQPYKMSKRAGNFILMKDVASEIGSDALRFIFLSKKPDTHLEFDVDELKKQDSSNP 411 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 ++Y+ YA AR ++F +A DL+ ++ + +S S L+ ++E Sbjct: 412 IYYINYANARIHTLFEKAGVNMQDLEKNI---QSLSFDSHIKDSATHLLFESLCLSHILE 468 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWS 537 ++ +E K+ YL +LA+ H ++ Sbjct: 469 SSFRDREMQKICEYLKNLAASLHSFYN 495 >gi|157165706|ref|YP_001467379.1| arginyl-tRNA synthetase [Campylobacter concisus 13826] gi|166232770|sp|A7ZF21|SYR_CAMC1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|112801951|gb|EAT99295.1| arginyl-tRNA synthetase [Campylobacter concisus 13826] Length = 527 Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 175/570 (30%), Positives = 300/570 (52%), Gaps = 51/570 (8%) Query: 21 KIKVE-KKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV 78 K+K E K+L+R V+E+P+D H +T L++ L P IA + V Sbjct: 4 KVKAEISKVLEREFVLEKPKDKNLAHYAT-PLFSLAKELRKSPAMIASEFADKFSDSKIV 62 Query: 79 DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138 ++ A G++N L +L +I I++ + + K + + IE++SANPTGP+H+ Sbjct: 63 EAS--AVNGYLNFKLKSEFLDEISKQILLDSENFAKEDAKKDSYL-IEYISANPTGPLHI 119 Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198 GH R AV GDTLA L GY ++ EYYINDAG QI+ L S+ ++ L+N PE Sbjct: 120 GHVRGAVYGDTLARLGKRLGYAISTEYYINDAGNQIDLLGTSISLAAKEQLFNESVVYPE 179 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 YY G Y+ + K +K+ E+ + E + L + ++ +++II+ DL + I Sbjct: 180 KYYRGDYILDIAKLANEKFGKEIF-YDESRNLELA-EFGKDIVLEIIKKDLADVGI---- 233 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ--LLFRSTMV 316 I++ A + +Y+G L P +K + M K+ ST + Sbjct: 234 -----------------FIESWASEKALYDG-LEPTINKLKRSNQMYEKEGATYIASTTL 275 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD DR ++++DG TY A D+ Y K+E+ FD+ I + G+DH GY+ RL+A + Sbjct: 276 GDDNDRVVVRNDGRPTYLAGDIIYHNAKFEKNFDHYINIWGADHHGYIARLKAAINFLGY 335 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 + ++ V+L ++V L ++G P KMSKRAG+ + + + E+G++++RF+ + + N+ L+ Sbjct: 336 DENRLEVILMQMVSLLKEGKPYKMSKRAGNAVLMSDIASEIGAEALRFIFISKANTSSLE 395 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE-FDTSE 495 FD ++K++ NP+FY+ YA+AR IF +A D VI + E D + Sbjct: 396 FDVDELKKEDSSNPIFYINYAHARINQIFAKAGKSVSD---------VINADFECLDENS 446 Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555 L+ P ++E+A +++ K+ YL LA+ FH ++ R V N + Sbjct: 447 KNLLFEALILPEILEDAFASRQLQKIPDYLKSLAASFHKFYNENR-------VVGNENED 499 Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++++ V AV+ I + NI+G+ + + M Sbjct: 500 SLLKVFAVVAVS--IKTAFNIMGITAKDRM 527 >gi|283954731|ref|ZP_06372248.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414] gi|283793784|gb|EFC32536.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414] Length = 530 Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 170/562 (30%), Positives = 292/562 (51%), Gaps = 45/562 (8%) Query: 26 KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84 KK+L+ +E P+D H +T A L++ L P+ IA + + + + D V A Sbjct: 10 KKVLECDFALENPKDKNLAHFATPLAFSLAKELKKSPMLIANDLANKFQ-NHDCFEVVEA 68 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 G++N +S ++L ++ + +++ ++ + K +E+VSANPTGP+H+GH R A Sbjct: 69 VNGYLNFRISKTFLNELANKALINPNDFTKGE-KKQESFLLEYVSANPTGPLHIGHARSA 127 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204 V GDTL L GY+ EYY+NDAG QI L LS+ ++ + + + + P+ YY G Sbjct: 128 VFGDTLTRLARHLGYKFDTEYYVNDAGNQIYLLGLSILLSVKENILSENVEYPDQYYKGE 187 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 Y+ + KE +K+ E F E +P + D++ M+ +I+ +L+ + I+ D + SE Sbjct: 188 YIADLAKEAFEKFGKE---FFSENNIPSLADWAKDKMLVLIKQNLEQVKIKIDTYASERS 244 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 ++ + + +L +YE ++ S+ GD+ DR + Sbjct: 245 YY----DTLNATLKSLKEHKGIYE----------------QEGKIWLASSQKGDEKDRVI 284 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 ++ DG TY AAD+ Y K K RG+ I + G+DH GY+ R++A + + ++ Sbjct: 285 IREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMGFLGFNPDNLEII 344 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L ++V L +DG P KMSKRAG+FI + VVDE+GSD++R++ L +K L+FD +++ Sbjct: 345 LAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDISDLQK 404 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLIVHLA 503 + NPV+Y+ YA+AR IF +A D + DL N F+ L+ I++ A Sbjct: 405 EDSSNPVYYINYAHARIHQIFVKAGKKIDDVIGADLQSLNQDGVNLLFEALNLKAILNDA 464 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 R ++ K+ YL +LA+ FH ++ + AN L L+L Sbjct: 465 FEARALQ---------KIPDYLKNLAANFHKFYNENK-----VVGSANEDDL----LKLF 506 Query: 564 HAVASIINSGLNIIGVESPNEM 585 VA + + +++G+E+ N+M Sbjct: 507 SLVALSVKTAFSLMGIEAKNKM 528 >gi|153952342|ref|YP_001397729.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97] gi|166232773|sp|A7H2J9|SYR_CAMJD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|152939788|gb|ABS44529.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97] Length = 530 Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 175/566 (30%), Positives = 295/566 (52%), Gaps = 53/566 (9%) Query: 26 KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84 KKIL+ +E P+D H +T A L++ L P+ IA + ++ + +SV A Sbjct: 10 KKILECDFALENPKDKNLAHFATPLAFSLAKELKKSPMFIASDLASKFQNHDCFESV-EA 68 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN----IEFVSANPTGPMHVGH 140 G++N +S ++L ++ + + + N KG K +E+VSANPTGP+H+GH Sbjct: 69 VNGYLNFRISKTFLNELANQALTN-----PNDFTKGEKKQESFLLEYVSANPTGPLHIGH 123 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R AV G+TL L GY+ EYY+NDAG QI L LS+ ++ + + + + PE Y Sbjct: 124 ARGAVFGNTLTRLARHLGYKFDTEYYVNDAGNQIYLLGLSILLSVKENILHENVEYPEQY 183 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G Y+ + KE +K+ E F EE +P + D++ M+ +I+ +L+ I+ D ++ Sbjct: 184 YKGEYIADLAKEAFEKFGKEF--FSEEN-IPSLADWAKDKMLVLIKQNLEQAKIKIDSYV 240 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE ++ + +++L +YE ++ S+ GD+ Sbjct: 241 SERSYY----DALNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEK 280 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR +++ DG TY AAD+ Y K K RG+ I + G+DH GY+ R++A + Sbjct: 281 DRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNN 340 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + ++L ++V L +DG P KMSKRAG+FI + VVDE+GSD++R++ L +K L+FD Sbjct: 341 LEIILAQMVSLLKDGEPYKMSKRAGNFILMSAVVDEIGSDALRYIFLSKKCDTHLEFDIS 400 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLI 499 ++++ NPV+Y+ YA+AR +F +A D + DL N F+ L+ I Sbjct: 401 DLQKEDSSNPVYYINYAHARIYQVFAKAGKKIDDVMGADLQSLNQDGINLLFEALNLKAI 460 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 ++ A R ++ K+ YL +LA+ FH ++ EN + N+ Sbjct: 461 LNDAFEARALQ---------KIPDYLKNLAANFHKFYN---ENKVVGSANEND------L 502 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L+L VA I + +++G+E+ N+M Sbjct: 503 LKLFSLVALSIKTAFSLMGIEAKNKM 528 >gi|83319739|ref|YP_424360.1| arginyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|109895004|sp|Q2SSA3|SYR_MYCCT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|83283625|gb|ABC01557.1| arginyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 554 Score = 270 bits (690), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 178/565 (31%), Positives = 298/565 (52%), Gaps = 49/565 (8%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IE ++ G LS++ +I S+ + PL +A ++ + + S+ IA GF+N+ Sbjct: 27 IIEINKNNTPGLLSSSICLISSKQVNKKPLDLANDFKEQLLLTNNYSSIQIANPGFLNVL 86 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 + P L ++S+++ +YG NL + +NIE+VSANPTG +HVGH R AV+G L + Sbjct: 87 VKPEILSNVISNVLTLKSKYG-NLEKQNKIINIEYVSANPTGYLHVGHARNAVIGSVLVN 145 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 L +GY+V EYY+NDAG QIN LA++VF Y QAL N D+ PE Y G + K Sbjct: 146 LFKKAGYKVQTEYYVNDAGNQINVLAVTVFVHYLQAL-NIDAKKPENCYAGEMYDDLAKI 204 Query: 213 LADKYSSEL--LNFPEEKWL-----PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 + +KY+ + + + + K L + K S+ +KII+ L N++ + SE + Sbjct: 205 IINKYNDQFKDIKYTDNKILDDNVHSLFKQISIDYFLKIIKQQLADFNVKIRHWSSEQEV 264 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 + D I E +L KSK D + L ++T GDD DR L+ Sbjct: 265 Y--DTHQI--------------EKVLKLYKSKDASYYK-DGAEFL-KTTQFGDDKDRVLV 306 Query: 326 KSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 KSD +YTY DLA + +R D +I V G DH GY+KR++A A + + + Sbjct: 307 KSDKTYTYILPDLATHHLRIKRTKADKLINVWGGDHHGYIKRMQAGLALLGNDPDILEIQ 366 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 + ++VRL +DG KMSKR G + L +++ VG D++R+M+ + ++ +D D + Sbjct: 367 MVQMVRLIKDGSEYKMSKRKGTAVWLVDILELVGVDALRYMLASKSSNSHMDLDLDLITL 426 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT----SELQLIV 500 ++ NP++Y QYA ARC SI QAK + + P E + E++L++ Sbjct: 427 KNSSNPIYYAQYATARCHSILNQAK-----------IKKITPLVKETNLLNNPKEIELLL 475 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 L + VI+N+ + ++ Y+ ++ +FH +++ ++ + NN +LT +RL Sbjct: 476 ILDNFKEVIKNSANNRSTQQICDYIQNICKIFHSYYA------EIKIIDENNLELTKLRL 529 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 + A+ ++ + IIG++ EM Sbjct: 530 GFIKAILQVLKNAFFIIGIQPVVEM 554 >gi|268679054|ref|YP_003303485.1| arginyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946] gi|268617085|gb|ACZ11450.1| arginyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946] Length = 528 Score = 270 bits (690), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 171/565 (30%), Positives = 301/565 (53%), Gaps = 48/565 (8%) Query: 24 VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83 +++K+ V+E+P + + GH +T A L++ L P+ IAE I + + D+ Sbjct: 9 IKEKLQREFVLEKPANLSFGHYATPIAFSLAKELKKSPIAIAEEICSSFDTN-DIFQEVT 67 Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143 KG+IN LS +L + + + + ++G++ + + +E+VSANPTGP+H+GH R Sbjct: 68 PIKGYINFKLSERFLDQYATWAIQNEEQFGQD--EQHETILLEYVSANPTGPLHIGHARG 125 Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203 AV+GD LA + GY++T EYY+NDAG Q++ L LS++ ++ + PE +Y G Sbjct: 126 AVIGDALARIGKHLGYQITTEYYVNDAGNQVDLLGLSIYLAGRENILGLHVTWPEEFYRG 185 Query: 204 VYLKHVGKELADKYSSEL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 Y+ +LA +EL + F +E + ++ + M+++I+ +L ++I + F+S Sbjct: 186 EYIV----DLAHVAQAELGSVIFEDEANIAVLSTWGKDKMLELIKSNLADVDIFFEQFVS 241 Query: 262 EDDFH-RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 E + + D S + L + YE + ++ RST +GD+ Sbjct: 242 EKSLYDKWDESFAK-----LQKNDKTYE----------------EGGKIWIRSTELGDEK 280 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR +++ DG TY A D+ Y K++R +D I + G+DH GY+ R+++ + +++ Sbjct: 281 DRVVVREDGRPTYLAGDIIYHDNKFQRSYDKYINIWGADHHGYITRVKSAINFLGYDESK 340 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + VLL ++V L + G P KMSKRAG+FI + VV EVGSD++RF+ L +K+ L+FD Sbjct: 341 LEVLLAQMVSLLKGGEPYKMSKRAGNFILMSDVVSEVGSDALRFVFLSKKSDTHLEFDVD 400 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500 K++ NP+FY+ YA+AR IF +A D++ +P E+ + ++ L Sbjct: 401 VFKQEDSNNPIFYINYAHARINQIFAKAGKSIADVE-------NVPLENMSEEAQNLLFS 453 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 L P V+E+A +++ K+ YL +LA+ H ++ R + K L Sbjct: 454 ALL-LPEVLEDAFHSRQVQKVTEYLKNLAASLHKFYNENR-----VVGSVDEEKF----L 503 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 +L VA + G+ +IG+ + M Sbjct: 504 KLFAVVALSLRVGMKLIGITAKERM 528 >gi|150021371|ref|YP_001306725.1| arginyl-tRNA synthetase [Thermosipho melanesiensis BI429] gi|149793892|gb|ABR31340.1| arginyl-tRNA synthetase [Thermosipho melanesiensis BI429] Length = 543 Score = 270 bits (689), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 187/554 (33%), Positives = 290/554 (52%), Gaps = 37/554 (6%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 IE P D G STN A+I ++ P +A+L +++ DP V IAG GFIN + Sbjct: 25 IEIP-DEKFGDYSTNVALIGAKYFKKPPREVAKLFQEKLQSDPLFSEVSIAGPGFINFRI 83 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 S S IL ++ Y + L K K+ +E+ SANPTGP VGH R V+GD L ++ Sbjct: 84 SKSVYVSILGKMIKKKENYWK-LPQKSIKIQLEYGSANPTGPFTVGHGRQLVIGDVLGNV 142 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + F GYEV +E Y+NDAG QI LA S++ RY + L+ DLPE Y G YL + K+L Sbjct: 143 LRFLGYEVDKEMYLNDAGRQIRLLAKSLWVRYNE-LFGKKYDLPEDGYKGSYLIDIAKKL 201 Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273 + + ++ E + K + QA+ I+ D + L++ F + I Sbjct: 202 VKEIEDKYVDVWNEN---VEKFFMQQAVANILSDMEQTLSMIDCKF----------NNKI 248 Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333 R+ + + GYV + +L K K + D+ S +G++ D+ L++ DG+YTY Sbjct: 249 RESF--VIQLGYV-DKVLKILKEKDLV-YEKDQALWFKVSEFIGEN-DKVLIRRDGTYTY 303 Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393 F D+AY K+ER +D + + GSDH G++ R++A +A+ + +N +L + V L + Sbjct: 304 FLTDIAYHLYKFERKYDKVYDIFGSDHHGHIPRMKAAMSALDIDEEFLNFILHQFVTLKK 363 Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453 +KMS RAG+FITL +V EVG D R+ + + L FD K +S ENPV+Y Sbjct: 364 SNEIVKMSTRAGNFITLEELVKEVGKDPTRYFFVMNDINTHLVFDLDLAKSKSNENPVYY 423 Query: 454 VQYAYARCRSIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511 VQYAYAR +SIF +A K I D F N+ E++ E+ +I L E+ ++ Sbjct: 424 VQYAYARIKSIFEKAGEKGIKGD-----FLENIDLLEND---EEMGIIKLLDEFVNSLKQ 475 Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571 P+ L Y+Y L+ FH +++ + + V N +++ RL L+ V I Sbjct: 476 VEEKLSPHFLTNYIYALSEKFHSYYA------KYKIVDEENISVSLARLGLLSVVKEIYK 529 Query: 572 SGLNIIGVESPNEM 585 ++G+E+P M Sbjct: 530 IVFKLLGIEAPERM 543 >gi|57168053|ref|ZP_00367192.1| arginyl-tRNA synthetase [Campylobacter coli RM2228] gi|57020427|gb|EAL57096.1| arginyl-tRNA synthetase [Campylobacter coli RM2228] Length = 497 Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 165/537 (30%), Positives = 282/537 (52%), Gaps = 44/537 (8%) Query: 50 AMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSG 109 A L++ L P++IA + A+ + D V A G++N LS ++L ++ + + + Sbjct: 2 AFSLAKELRKSPISIANELAAKFQEHSYFDKV-EALNGYLNFRLSKTFLNELANKALQNP 60 Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169 E+ + K +E+VSANPTGP+H+GH R AV GDTL L GY+ EYY+ND Sbjct: 61 NEFSKGE-DKTESFLLEYVSANPTGPLHIGHARGAVFGDTLTRLARHLGYKFNTEYYVND 119 Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229 AG QI L LS+ ++++ + + + PE YY G Y+ + KE +K+ E F EE Sbjct: 120 AGNQIYLLGLSILLSVKESILHENVEYPEQYYKGEYIADLAKEAFEKFGKEF--FSEEN- 176 Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 +P + D++ M+ +I+ +L+ I+ D ++SE ++ + +++L +YE Sbjct: 177 IPSLADWAKDKMLVLIKQNLEQAKIKIDNYVSERSYY----DALNATLESLKEHKGIYE- 231 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349 ++ S++ GD+ DR +++ DG TY AAD+ Y K K RG+ Sbjct: 232 ---------------QEGKIWLASSLKGDEKDRVIIREDGRGTYLAADIVYHKDKMSRGY 276 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 I + G+DH GY+ R++A + + ++L ++V L +DG P KMSKRAG+FI Sbjct: 277 GKCINIWGADHHGYIPRMKAAMEFLGFDSNNLEIILAQMVSLLKDGEPYKMSKRAGNFIL 336 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 + VVDE+GSD++R++ L +K L+FD ++++ NPV+Y+ YA+AR +F +A Sbjct: 337 MSDVVDEIGSDALRYIFLSKKCDTHLEFDISDLQKEDSSNPVYYINYAHARIHQVFAKAG 396 Query: 470 DIFPD-LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 D + DL + + L+ V+ +A A+ K+ YL +L Sbjct: 397 KKIDDVMKADL---------QSLNQDGVNLLFEALNLKAVLNDAFEARALQKIPDYLKNL 447 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A+ FH ++ EN + N+ L+L VA I + +++G+E+ N+M Sbjct: 448 AANFHKFYN---ENKVVGSANEND------LLKLFSLVALSIKTAFSLMGIEAKNKM 495 >gi|119358466|ref|YP_913110.1| arginyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266] gi|166232775|sp|A1BJV9|SYR_CHLPD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|119355815|gb|ABL66686.1| arginyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266] Length = 551 Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 185/562 (32%), Positives = 300/562 (53%), Gaps = 42/562 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFIN 90 ++IERP D G STN A ++++ +P A ++A + PD + S+ +AG GFIN Sbjct: 24 VLIERPADKKFGDFSTNIAFLIAKESRRNPKEFAGELIAHLSFPPDTIKSMTVAGPGFIN 83 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +L+P+++ + + I++ G YGR+ +GKG K +E+VSANPTGP+ +G R V+GD + Sbjct: 84 FFLTPTFIMQSVEQILLEGKGYGRSCLGKGKKAIVEYVSANPTGPLTIGRGRGGVLGDCI 143 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+L+ Y VTREYY NDAG Q+ L SV +RY + L PE +Y G Y++ + Sbjct: 144 ANLLETQSYAVTREYYFNDAGRQMQILGESVRFRYLE-LCGVAETFPETHYQGAYIREIA 202 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD-FHR-- 267 + L + + L + LP +K + K I++ L+ + I+HD F +E +HR Sbjct: 203 ESLFAGHGAALQGVHD--LLPFIKSAET-IIFKSIKNTLERIGIRHDSFFNEHTLYHREG 259 Query: 268 GDPSPIRDIIDNLARQGYV--YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 S ++ID L + ++ Y+G F ++ +G + D+ L+ Sbjct: 260 SGQSANEEVIDLLREKQFIGEYDG------------------ATWFLTSRIGQEKDKVLI 301 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVL 384 KS G +Y D+AY K++RG+D M+ V G+DH Y LEA+ + ++I V Sbjct: 302 KSSGEPSYRLPDIAYHITKFKRGYDLMVNVFGADHIDEYPDVLEAL-KILGYDASRIQVA 360 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 + + V DG +KMS R G+ L +VD+VG D+ R + R L+FD K+ Sbjct: 361 INQFVTTTVDGQSVKMSTRKGNADLLDDLVDDVGPDATRLFFIMRSKDSHLNFDIDLAKK 420 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP-QESEFDTSELQLIVHLA 503 QSK+NPVFY+ YA+AR S+ R A + D D +++ +SE EL+L + L Sbjct: 421 QSKDNPVFYLHYAHARICSLLRMAA-LENGFDPDGSGHHLLQLLDSE---PELRLGLLLL 476 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 EYP++I + EP K+ YL+ +A ++H + +E P L+ ++ RL L Sbjct: 477 EYPQMITASIRLLEPQKMVDYLHSVAELYHKFY---QECPILK----AEPDISKARLFLS 529 Query: 564 HAVASIINSGLNIIGVESPNEM 585 A ++ +G I+G+ +P M Sbjct: 530 LATKQVLCNGFRILGISAPESM 551 >gi|23465834|ref|NP_696437.1| arginyl-tRNA synthetase [Bifidobacterium longum NCC2705] gi|39932215|sp|Q8G4V2|SYR_BIFLO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|23326531|gb|AAN25073.1| arginyl-tRNA synthetase [Bifidobacterium longum NCC2705] Length = 620 Score = 267 bits (682), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 181/617 (29%), Positives = 314/617 (50%), Gaps = 90/617 (14%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 +D++ + RP+D AHG ++N AM L++ G+ P +AE A + + V +AG GF Sbjct: 34 VDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKPRDLAEPFAAALAEADGIAKVEVAGPGF 93 Query: 89 INLYLSPSYLRKILSSIVVSGI------------EYGRNLIGKGTKVNIEFVSANPTGPM 136 IN+ L + ++ +++ +G EYGRN G +N+EFVSANPTGP+ Sbjct: 94 INITLDSASAAAVVDAVLAAGAVTDADKHLNKVNEYGRNDHLGGQTLNLEFVSANPTGPI 153 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---- 192 H+G R A VGD +A ++ +G +V REYY ND G QIN A S+ + +A NN Sbjct: 154 HIGGTRWAAVGDAMARVLEANGAKVVREYYFNDHGEQINRFAKSLVAAWAEA--NNLGEA 211 Query: 193 --DSDLPEGYYPGVYLKHVGKELADKYSSELLNFP----EEKWL-----PI--------- 232 ++ P Y G Y+ + + + S+ ++ +++ L P+ Sbjct: 212 GYQTETPCDGYKGAYINEIAARVQAEAESDGVDLTALAHQDQGLNDDGEPLGEADTEVRE 271 Query: 233 -VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291 + +V M I+ +K + D++ E+ + + I+ L +G +++ Sbjct: 272 EFRKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLYA--DGKVDAAIEELKSRGDIFD--- 326 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF---KCKYERG 348 K T F ST GDD DR ++KS+G + YFAAD+AY+ + + E Sbjct: 327 ---KDGAT----------WFESTKHGDDKDRVIIKSNGEFAYFAADIAYYWDKRHRAENS 373 Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDF 407 D IY++G+DH GY+ R+ A+ AA ++ + + +L+ +LV + +DG P++MSKRAG+ Sbjct: 374 ADVAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQILIGQLVNVMKDGKPVRMSKRAGNV 433 Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467 +T+ +V VG D+ R+ + ++ D D + + +NPV+YVQYA+AR +++ R Sbjct: 434 VTIDDLVSVVGVDAARYSLARSDYNQNFDIDLALLASHTNDNPVYYVQYAHARSKNVDRN 493 Query: 468 AKDI---FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 A + D L ++E D +++ LA++P V+ A ++P+K+A Y Sbjct: 494 AAAAGISYEGADLALL-------DTEADG---EVLAALAQFPSVLATAADDRQPHKVARY 543 Query: 525 LYDLASVFHGHWSHGR------ENPRLRFVQANNRKLTM----------MRLQLVHAVAS 568 L +LA+ +H ++ R +P R + L + RL+L AV Sbjct: 544 LEELAATYHKWYNVERVVPMALTDPETRGDDEARKALEIAKNPEPARAAARLKLNDAVQQ 603 Query: 569 IINSGLNIIGVESPNEM 585 +I +GL+++GV +P +M Sbjct: 604 VIANGLDLLGVTAPEKM 620 >gi|34556632|ref|NP_906447.1| arginyl-tRNA synthetase [Wolinella succinogenes DSM 1740] gi|81833211|sp|Q7MAK6|SYR_WOLSU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|34482346|emb|CAE09347.1| ARGINYL-TRNA SYNTHETASE [Wolinella succinogenes] Length = 528 Score = 267 bits (682), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 170/558 (30%), Positives = 290/558 (51%), Gaps = 50/558 (8%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V+E+P+D HGH +T AA L++ L +P IA+ + ++ +SV G G+IN Sbjct: 17 VVLEKPKDKNHGHYATPAAFSLAKELKKNPALIAQELSKKLSEIEVFESVQSVG-GYINF 75 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L +L S + G E+G+ K + +E+VSANPTGP+H+GH R AV+GD L+ Sbjct: 76 RLKQGFLDAQASLALSQGREFGKG--DKQGSILLEYVSANPTGPLHIGHARGAVLGDALS 133 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 + GY + EYY+NDAG QI+ L LS++ + +L + PE YY G Y+ + K Sbjct: 134 RIGRHLGYALETEYYVNDAGNQIHLLGLSIYLAGRDSLLSLPVTYPEQYYRGEYIVDIAK 193 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 E K+ + F +E ++P + + + M++ IR +L +I D ++SE + Sbjct: 194 EALKKWGEK--AFADEAFIPELSLFGKELMLEEIRSNLADTHIHFDHYVSEKSLY----- 246 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 R Y + ++ Q C ++ RS+ GD+ DR +++ G Sbjct: 247 ---------PRWEETYALL------QSHQGCYEGGGKVWLRSSAHGDEKDRVIVRESGEP 291 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 TY A D+ Y K+ R +D I + G+DH GY+ R++A + +++ VLL ++V L Sbjct: 292 TYLAGDIIYHADKFARPYDRYINIWGADHHGYIARVKAAIEFLGHDSSKLEVLLSQMVTL 351 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 + G P KMSKRAG+FI +R V++++G+D++RF+ L +K L+FD + ++ NP+ Sbjct: 352 LKGGQPYKMSKRAGNFILMRDVLEDIGADALRFIFLSKKPDTHLEFDVDDLNKEDSSNPI 411 Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP--QESEFDTSELQLIVHLAEYPRVI 509 FY+ YA+AR ++ ++ LD + ++S FD L L + P+V+ Sbjct: 412 FYINYAHARIHTMLGKS-----SLDSQEIEAASLEGLEDSIFDLLFLSL-----QLPQVL 461 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVA 567 E++ + K+A YL LA FH ++ + E P+ L++ VA Sbjct: 462 EDSFENRAIQKVAEYLRALAGEFHKFYNEHKILETPQ-----------EAALLKVCKVVA 510 Query: 568 SIINSGLNIIGVESPNEM 585 ++ GL ++G+ + M Sbjct: 511 LSLSQGLALLGITAKERM 528 >gi|110004341|emb|CAK98679.1| probable arginyl-trna synthetase protein [Spiroplasma citri] Length = 557 Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 182/586 (31%), Positives = 296/586 (50%), Gaps = 51/586 (8%) Query: 11 LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 L+ YLK + I V ++E+PR GHLSTN A++L++ L P IAE I+A Sbjct: 12 LQEYLKANNLTIPV--------MVEKPRQEGFGHLSTNLALLLAKKLKKTPNKIAEEIIA 63 Query: 71 RIKIDPD--VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128 I+ + + IAG GFIN L+ L ++++ ++ YG + K N+E V Sbjct: 64 FIEKNNKSYFKKIEIAGAGFINFTLADDQLHQVINEVLKRQANYGYS-AAKNFTYNLEIV 122 Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188 SANPTG +H+GH R +GD++A ++ +GY V EYY+NDAG QINTLA++VF Y Sbjct: 123 SANPTGFLHIGHARNCAIGDSVARILRAAGYHVQTEYYVNDAGNQINTLAVTVFVSYLNL 182 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN--FPEE------KWLPIVKDYSVQA 240 L ++LP Y G V + D Y + +N F E+ K I + SV Sbjct: 183 L-GKKTELPADAYRGDMYDAVAQYFVDNYQDKFINLTFNEDYKISDPKVHEIFRKKSVDL 241 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 + II+ L+ + + + SE + G I + A+ G Y+ Sbjct: 242 FLDIIKKQLQLFRVDIEYYSSEASMYEG--GKIDATLAQYAKLGKTYQ------------ 287 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSD 359 L ++T GDD DR L+KS+G TY DLA + R D ++ G D Sbjct: 288 ----QDGALWLKTTDFGDDKDRVLVKSNGDLTYITPDLASHNERLIRSKADKLVNFWGGD 343 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ R+ A + KK +++ + ++VRL +DG KMSKR G + L +++E+G Sbjct: 344 HHGYIVRMLAGLQLLGYKKDILDIDMIQMVRLIKDGAEYKMSKRKGTAVWLIDLIEEIGV 403 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D++R+M+ + +D D +K+ S +NPV+Y QYA ARC S+ +QAK ++F Sbjct: 404 DAIRYMVSSKSAQSHMDLDIGILKQHSSKNPVYYAQYATARCNSVLKQAK--ISKINF-- 459 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 +V E EL L+ + + R I+ A ++P+ + Y+ ++A FH +++ Sbjct: 460 --TDVKTFELLTSQKELYLLNEIDLFNRCIKGAAKLRQPHLICDYVQNIARQFHSYYNES 517 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +LT RL + + ++++ N++GV +M Sbjct: 518 ------KVINLDNLELTKQRLVFIKVIYQVLSNAFNLLGVNVIEQM 557 >gi|222824086|ref|YP_002575660.1| arginyl-tRNA synthetase [Campylobacter lari RM2100] gi|254782949|sp|B9KCX0|SYR_CAMLR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|222539308|gb|ACM64409.1| arginyl-tRNA synthetase [Campylobacter lari RM2100] Length = 531 Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 164/564 (29%), Positives = 290/564 (51%), Gaps = 42/564 (7%) Query: 23 KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82 ++++K+ ++E P++ H +T A L++ L +P+ IA IV ++K D D Sbjct: 8 EIKEKLGRDFILENPKNKNLAHFATPLAFSLAKELKQNPMIIANDIVVKLK-DCDCFESV 66 Query: 83 IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 A G++N LS ++L + + + + ++ K +E+VSANPTGP+H+GH R Sbjct: 67 EALNGYVNFKLSKAFLNSLATQALSDSENFAKD-DKKEQSFLLEYVSANPTGPLHIGHAR 125 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202 A+ GDTL + GY+ EYY+NDAG QI L LS+ ++ P+ YY Sbjct: 126 GAIFGDTLTRVARHLGYKFDTEYYVNDAGNQIYLLGLSILLAVKEHCLKEQVQYPDEYYK 185 Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262 G Y+ V KE ++ + F EE +P + ++ M+KII+ +L I D ++SE Sbjct: 186 GEYIIDVAKEAFAEFEKDF--FVEEN-IPQLALWAKDKMLKIIKQNLADAKIFIDAYVSE 242 Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322 ++ S + + + L G YE ++ S++ GD+ DR Sbjct: 243 TSYY----SELENTLKALKEHGGTYE----------------QDGKIWLASSVKGDEKDR 282 Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 ++K DG TY AAD+ Y K K RG+D I + G+DH GY+ R++A + + Sbjct: 283 VIIKDDGKGTYLAADIVYHKDKMSRGYDKCINIWGADHHGYIARMKAAMEFLGHDSQNLE 342 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 ++L ++V L ++G P KMSKRAG+FI + V++E+GSD +R++ + +K L+FD + Sbjct: 343 IILAQMVSLLKNGEPYKMSKRAGNFILMGDVLEELGSDVLRYIFISKKCDTHLEFDVDEF 402 Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 K++ NPV+Y+ YA+AR +F +A D+ + F + + L+ Sbjct: 403 KKEDSSNPVYYINYAHARIHQVFAKAGKSVDDVMYAKFES--------LNEDGMNLLFES 454 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 V+ +A ++ K+ YL +LAS+FH ++ + V ++ + ++L Sbjct: 455 LNLKAVLNDAFESRSLQKIPDYLKNLASLFHKFYNENK-------VVGSDNEDEFLKLFA 507 Query: 563 VHAVASIINSGLNIIGVESPNEMS 586 + A++ I ++G+E+ N+M+ Sbjct: 508 ICALS--IKIAFALMGIEAKNKMN 529 >gi|78187934|ref|YP_375977.1| arginyl-tRNA synthetase [Chlorobium luteolum DSM 273] gi|109895014|sp|Q3B147|SYR_PELLD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|78167836|gb|ABB24934.1| arginyl-tRNA synthetase [Chlorobium luteolum DSM 273] Length = 552 Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 177/562 (31%), Positives = 284/562 (50%), Gaps = 41/562 (7%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFIN 90 I+IE+P G +TN A + ++ L +P +AE + + + V +AG GFIN Sbjct: 24 IIIEKPTSPKFGDYATNIAFLAAKELKRNPRQLAEELTGHFRFPEGTVTKTEVAGPGFIN 83 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 ++ P+++ + + G EYG+ G+G +E+VSANPTGP+ +G R V+GD + Sbjct: 84 FFMEPAFIMQSAERVFREGAEYGKGREGQGKTAIVEYVSANPTGPLTIGRGRGGVLGDCI 143 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+L GY V REYY NDAG Q+ L SV +RY + L D P+ +Y G Y+ + Sbjct: 144 ANLAEAQGYHVNREYYFNDAGRQMQILGESVRYRYME-LCGRTIDFPDTHYKGGYIGEIA 202 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD- 269 +++ ++ +LL+ E P + + + I+ L L I HD F +E + D Sbjct: 203 EKIHSEHGEDLLHV--ESIEPF-RSEAESIIFSSIQKTLGRLGIVHDSFFNEHTLYTADL 259 Query: 270 --PSPIRDIIDNLARQGYV--YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 SP +++ID L +G++ Y+G F +T +G + D+ L+ Sbjct: 260 NGISPNQNVIDRLREKGFIGEYDG------------------ATWFLTTKLGQEKDKVLI 301 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVL 384 KS G +Y D+AY KY RGFD +I V G+DH Y LEA+ + A + + Sbjct: 302 KSSGEPSYRLPDIAYHVTKYARGFDMIINVFGADHIDEYPDVLEAL-KILGHDTAHVRIA 360 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 + + V +G +KMS R G+ L ++D+VG D+ R + R L+FD K+ Sbjct: 361 INQFVTTTVNGETVKMSTRKGNADLLDDLIDDVGPDATRLFFIMRSKDSHLNFDVELAKK 420 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT-SELQLIVHLA 503 QSK+NPVFY+QYA+AR S+ R A + ++ FD R T ELQL + Sbjct: 421 QSKDNPVFYLQYAHARICSLLRLA---WSEIGFDAAKRPEPGVLMRLTTPEELQLAFGIL 477 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 ++ +A EP K+ Y++ +A +FH + +E P L+ ++ RL L Sbjct: 478 DFGEASRSAFRMLEPQKMVDYMHSIAELFHRFY---QECPILK----AEPEIAEARLFLA 530 Query: 564 HAVASIINSGLNIIGVESPNEM 585 AV ++ +G I+G+ +P M Sbjct: 531 VAVRQVLQNGFRILGISAPESM 552 >gi|149195098|ref|ZP_01872190.1| arginyl-tRNA synthetase [Caminibacter mediatlanticus TB-2] gi|149134811|gb|EDM23295.1| arginyl-tRNA synthetase [Caminibacter mediatlanticus TB-2] Length = 539 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 174/564 (30%), Positives = 303/564 (53%), Gaps = 55/564 (9%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 I +P+ GH + ++ +P+ A+ + ++K D + +SV GF+N+ L Sbjct: 19 INKPKQKEFGHYAV-PIFKYAKENKQNPIEFAKNLCEKLKCD-EFESVEPLS-GFVNIKL 75 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 S +L + ++ + ++ K + +E++SANPTGP+H+GH R A+ GD L + Sbjct: 76 SDKFLDDFANKVLEEKENFAKD--EKKESILLEYISANPTGPLHIGHARGAIFGDALTRI 133 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 GY++T EYY+NDAG QIN L LSV+ ++ L N + P+ YY G Y+K + K+ Sbjct: 134 GRHIGYKITTEYYVNDAGRQINLLGLSVYLAAREILGLNVT-WPDEYYKGEYIKDLAKDA 192 Query: 214 ADKYSSELLNF------PEEKWLPIVKD-----YSVQAMMKIIRDDLKALN-IQHDIFIS 261 +++ + E+K I +D ++ M++ I+ D+KALN I D ++S Sbjct: 193 IEEFGEDYFKKEVEIIQKEDKKEAIFEDERLSLWAKDKMLEEIKKDIKALNVIPFDNWVS 252 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E ++ +R I L + +YE ++ +S+ D+ D Sbjct: 253 ERSLYKY-WDEVRTI---LEKNNALYE----------------KDGKIWLKSSEYKDEKD 292 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381 R +++ DG TY A D+ Y K++RG+D I + G+DH GY+ R++A + + ++ Sbjct: 293 RVVVREDGRPTYLAGDIIYHWDKFKRGYDRYINIWGADHHGYIARVKAAIKFLGFDERKL 352 Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441 +LL ++V+L + G P KMSKRAG+FI +R VV++VG+D++RF+ L +K L+FD Sbjct: 353 EILLSQMVKLLKGGEPYKMSKRAGNFILVRDVVEDVGADALRFVFLTKKADTHLEFDVDD 412 Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501 + ++ NP +YV YA+AR RSIFR + D+ ++ +N+ E E LQL Sbjct: 413 LNKEDSSNPNYYVNYAHARIRSIFRNKNIDYDDIK-NIELKNLNEDEKELLFLALQL--- 468 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 P V+E+A +EP++L +L DLAS FH ++ + V + ++ +RL+ Sbjct: 469 ----PYVLEDAFTNREPHRLTNFLIDLASEFHKFYNKNK-------VIGSEKE--EIRLK 515 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 ++ V SI+ GL+++G+ + M Sbjct: 516 ILAVVGSILKLGLSLLGITAKERM 539 >gi|71893371|ref|YP_278817.1| arginyl-tRNA synthetase [Mycoplasma hyopneumoniae J] gi|109895006|sp|Q4AAT7|SYR_MYCHJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|71851498|gb|AAZ44106.1| arginyl-tRNA synthetase [Mycoplasma hyopneumoniae J] gi|312600985|gb|ADQ90240.1| Arginyl-tRNA synthetase [Mycoplasma hyopneumoniae 168] Length = 534 Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 174/567 (30%), Positives = 309/567 (54%), Gaps = 56/567 (9%) Query: 23 KVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVD 79 K E I+D +++IE+ ++ G S+N A+I ++ +D L +A+ I ++ + +++ Sbjct: 14 KNENLIIDESKLIIEKSKN--FGDYSSNVALIFAKQNKIDSLKLAQTIKNQLLSENLNLE 71 Query: 80 SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139 + IA GFIN ++S + I+S I+ G +GR + K K+N+EFVSANPTG +H+G Sbjct: 72 KIEIAPPGFINFFISKNEYANIVSEIIQKGENFGRYSLQK--KINLEFVSANPTGFLHLG 129 Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199 H R AV+GD LA+++ FSG V REYYIND G+QI+ L SVF RYQQ LPE Sbjct: 130 HLRGAVIGDILANILEFSGNFVFREYYINDFGSQIDRLVGSVFSRYQQIF--KKFALPEE 187 Query: 200 YYPGVYLKHVGKELADKYSSELLN--FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257 Y G + ++ Y+++ N + + I ++ S++ + I+ DL L+I+ D Sbjct: 188 AYLGEDIIWCAQKFFQIYANKFENSSLDDLETYKIFREKSIEIFLDEIKADLANLSIKFD 247 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 +F SE + R + + NLA +VY+ + + +++ G Sbjct: 248 VFSSESELFRTEK-----VQKNLANLPFVYK----------------KEEAIWLKTSKFG 286 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSGYVKRLEAVAAAVS 375 D DR L+K +G +TYF++D+AY K F D +I + G+DH GYV R++A V+ Sbjct: 287 DQKDRVLVKKNGEFTYFSSDIAYHFEKINSNFKPDFLINIWGADHIGYVDRMKAALKTVN 346 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435 + ++++LL +LV+L+++G KMSKR G T++ +++ V D++R+ + R + L+ Sbjct: 347 LNQ-KLDILLYQLVKLFKNGQEFKMSKRMGKTFTIKDLLELVDQDAIRYFISERSYNSLV 405 Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495 +FD + S +NP+F +QYA+AR + + + P ++ E+E +E Sbjct: 406 EFDIGLAAKISLQNPLFLIQYAHARASKLLANS---------TIVPEKILKFEAE---NE 453 Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555 LI L ++ ++ T + L YL +LA++F+ +S+ + + N + Sbjct: 454 TILISKLKQFEEIVLKITKNYKINLLNKYLLELANLFNSFYSNSK-------IIGNQNQN 506 Query: 556 TMMRLQLVHAVASIINSGLNIIGVESP 582 ++ L L AV ++ +GL ++G+++ Sbjct: 507 SL--LSLTKAVQIVLKNGLKLLGIKAK 531 >gi|255023773|ref|ZP_05295759.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J1-208] Length = 359 Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 150/378 (39%), Positives = 219/378 (57%), Gaps = 20/378 (5%) Query: 64 IAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +AE IV +K D + V IAG GFIN YL +YL ++ I+ +YG + GKG K Sbjct: 1 MAESIVPELKKDNKLIKEVEIAGPGFINFYLDNAYLTDLVPVILTEDKQYGESDFGKGEK 60 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 IEFVSANPTG +H+GH R A +GD+LA++M +G++V+REYYINDAG QIN L LS Sbjct: 61 FQIEFVSANPTGDLHLGHARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLVLSAE 120 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 RY +AL DS+ PE Y G + +GK+LA KY + ++ EE+ + + ++ + Sbjct: 121 ARYFEAL-GLDSEFPEDGYRGADIISLGKDLAAKYGDKYVHTSEEERRSVFRVDALAFEI 179 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 +R DL+ + D + SE + + + + ++ L GY+YE Sbjct: 180 GKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE-------------- 223 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 D L R+T DD DR L+KSDGSYTYF D+AY K ERGFD +I + G+DH G Sbjct: 224 -QDGATWL-RTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGADHHG 281 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 Y+ R+ A A+ Q+ V + +LV L+ DG+ +KMSKR G +T+R +++EVG D+ Sbjct: 282 YIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVGLDAT 341 Query: 423 RFMMLWRKNSELLDFDFC 440 R+ R + ++FD Sbjct: 342 RYFFAMRSSDTHMNFDMS 359 >gi|240047288|ref|YP_002960676.1| arginyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581] gi|239984860|emb|CAT04851.1| Arginyl-tRNA synthetase [Mycoplasma conjunctivae] Length = 518 Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 177/570 (31%), Positives = 296/570 (51%), Gaps = 67/570 (11%) Query: 28 ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87 I D I + H ++N A+IL+ L P+ +AE I +IK + ++ V +A G Sbjct: 4 IFDESKIIISQSSKHADFTSNIALILAAINKLSPMELAEQISQKIKTNNNIAKVEVAKPG 63 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FIN ++S +I+ I+ YG + K+NIEFVSANPTG +H+GH R A++G Sbjct: 64 FINFFISNQGFVEIIQKIIKEDDCYGSQ--KQNKKINIEFVSANPTGFLHLGHLRSAIIG 121 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG---- 203 D LA ++ FSG +V REYYIND G Q++ L S+ RY Q +++ + +P+ Y G Sbjct: 122 DVLARVLEFSGNQVLREYYINDFGVQVDRLTSSLIARYDQ-IFDKNVVMPQDSYVGEDIV 180 Query: 204 -----VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 +YL E+ DK+ + N + ++ + +Q + I+ DL L+I D Sbjct: 181 WGANKIYL-----EIGDKFQKDYKNEDKREFFW---NKGLQIYLDEIKKDLTNLDIFFDK 232 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + SE + H+ I N+ + YE L +++ GD Sbjct: 233 YSSEAELHKNSI-----IKTNIKKLPGTYE----------------QDGALWLKTSQYGD 271 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSGYVKRLEAVAAAVSE 376 D DR L+K DG YTYF AD+ Y K F D +I + G+DH GYV R+++ + V E Sbjct: 272 DKDRVLIKQDGKYTYFGADICYHLEKINSSFHPDLLINIWGADHIGYVDRIKSALSLVGE 331 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 + ++ +LL +LV+L ++G KMSKR G T++ ++ DS+R+ M+ R + +++ Sbjct: 332 QD-KLYILLYQLVKLLKNGQEFKMSKRKGSTFTIKDILKLADKDSIRYFMVERSENSIIE 390 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS-E 495 FD KV + +++NP+F +QYAYAR + + + F ++ S F+T E Sbjct: 391 FDIEKVNQINEQNPLFIIQYAYARSYQLLEKIQYNFNNI-------------SSFNTPFE 437 Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555 ++LI L E+ +I + + L YL DLA+ F+ +S+ + + + RK Sbjct: 438 IKLINELKEFEVIIAKISHNYKINLLNKYLLDLANSFNSFYSNVK-------ILDSPRKD 490 Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++M +V AV +I +GL ++G++ ++ Sbjct: 491 SLM--AIVKAVNIVIRNGLKLLGIQGKEKV 518 >gi|72080354|ref|YP_287412.1| arginyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448] gi|109895005|sp|Q4A900|SYR_MYCH7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|71913478|gb|AAZ53389.1| arginyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448] Length = 534 Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 173/567 (30%), Positives = 309/567 (54%), Gaps = 56/567 (9%) Query: 23 KVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVD 79 K E I+D +++IE+ ++ G S+N A++ ++ +D L +A+ I ++ + +++ Sbjct: 14 KNENLIIDESKLIIEKSKN--FGDYSSNVALMFAKQNKIDSLKLAQTIKNQLLSENLNLE 71 Query: 80 SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139 + IA GFIN ++S + I+S I+ G +GR + K K+N+EFVSANPTG +H+G Sbjct: 72 KIEIAPPGFINFFISKNEYANIVSEIIQKGENFGRYSLQK--KINLEFVSANPTGFLHLG 129 Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199 H R AV+GD LA+++ FSG V REYYIND G+QI+ L SVF RYQQ LPE Sbjct: 130 HLRGAVIGDILANILEFSGNFVFREYYINDFGSQIDRLVSSVFSRYQQIF--KKFALPEE 187 Query: 200 YYPGVYLKHVGKELADKYSSELLN--FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257 Y G + ++ Y+++ N + + I ++ S++ + I+ DL L+I+ D Sbjct: 188 AYLGEDIIWCAQKFFQIYANKFENSSLDDLETYKIFREKSIEIFLDEIKADLANLSIKFD 247 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 +F SE + R + + NLA +VY+ + + +++ G Sbjct: 248 VFSSESELFRTEK-----VQKNLANLPFVYK----------------KEEAIWLKTSKFG 286 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSGYVKRLEAVAAAVS 375 D DR L+K +G +TYF++D+AY K F D +I + G+DH GYV R++A V+ Sbjct: 287 DQKDRVLVKKNGEFTYFSSDIAYHFEKINSNFKPDFLINIWGADHIGYVDRMKAALKTVN 346 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435 + ++++LL +LV+L+++G KMSKR G T++ +++ V D++R+ + R + L+ Sbjct: 347 LNQ-KLDILLYQLVKLFKNGQEFKMSKRMGKTFTIKDLLELVDQDAIRYFISERSYNSLV 405 Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495 +FD + S +NP+F +QYA+AR + + + P ++ E+E +E Sbjct: 406 EFDIGLAAKISLQNPLFLIQYAHARASKLLANS---------TIVPEKILKFEAE---NE 453 Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555 LI L ++ ++ T + L YL +LA++F+ +S+ + + N + Sbjct: 454 TILISKLKQFEEIVLKITKNYKINLLNKYLLELANLFNSFYSNSK-------IIGNQNQN 506 Query: 556 TMMRLQLVHAVASIINSGLNIIGVESP 582 ++ L L AV ++ +GL ++G+++ Sbjct: 507 SL--LSLTKAVQIVLKNGLKLLGIKAK 531 >gi|237753349|ref|ZP_04583829.1| arginyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430] gi|229375616|gb|EEO25707.1| arginyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430] Length = 539 Score = 263 bits (672), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 173/562 (30%), Positives = 293/562 (52%), Gaps = 49/562 (8%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 V+E+PRD + GH + ++ L P IA+ +++ P + SV + G++N Sbjct: 18 VLEKPRDKSFGHFAL-PTFSFAKTLKKAPQIIAQEFAQKLESIPQIASVSVVN-GYVNFS 75 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGK-----GTKVNIEFVSANPTGPMHVGHCRCAVVG 147 LS ++L + + + L K KV +E+VSANPTGP+H+GH R AV G Sbjct: 76 LSNAFLGQCAWEFLQDDFKESSKLESKKVESRNEKVLLEYVSANPTGPLHIGHARGAVFG 135 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D+LA + F GY + EYYINDAGAQI L S+++ + +++ +LP Y G Y+ Sbjct: 136 DSLARIGRFLGYTIHTEYYINDAGAQIQKLGKSIYYAGRALVFSESRELPSECYQGEYVF 195 Query: 208 HVGKELADKYSSELLN--FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 ELA+ +EL F + L + + M+ I+ +L + I D ++SE + Sbjct: 196 ----ELAECARAELGESVFESLESLEKLSVFGKDKMLLEIKSNLAQVGIVFDSYVSEREL 251 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 S + +++L VYE +L +ST GD+ DR ++ Sbjct: 252 F----SQLDSTLESLKAHNGVYES----------------ENKLWLKSTEFGDEKDRVIV 291 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 + G TY A D+ Y K K+ERGF + I + G+DH GY+ R++A + ++ VLL Sbjct: 292 RESGEATYLAGDIIYHKNKFERGFSHYINIWGADHHGYIARVKAALEYLGFDSQKLEVLL 351 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 ++V L +DG+P KMSKRAG+FI ++ VVDEVG+D++R M L +K L+FD +K+Q Sbjct: 352 AQMVALLKDGIPFKMSKRAGNFILMKDVVDEVGADALRLMFLSKKPDTHLEFDVELLKKQ 411 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE--LQLIVHLA 503 NPV+Y+ YA+AR ++F ++ + + + Q +D E L+V Sbjct: 412 DSSNPVYYINYAHARIHTLFSKS-----NFTMESLKALSLEQYKAWDLQESLRDLLVLAL 466 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 +V+ +A + K+ YLY L++ FH ++ + + +++ ++++ +V Sbjct: 467 GIEKVLSDAFSQRLINKVVDYLYTLSADFHRFYNETK-------ILNTDQEEQILKVLVV 519 Query: 564 HAVASIINSGLNIIGVESPNEM 585 VA + GL+++GV++ +M Sbjct: 520 --VAHSLALGLDLLGVKAKVKM 539 >gi|13357838|ref|NP_078112.1| arginyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170761964|ref|YP_001752362.1| arginyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171920258|ref|ZP_02691286.2| arginyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|183508719|ref|ZP_02958202.1| arginyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701953|ref|ZP_02971591.1| arginyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|38258402|sp|Q9PQL3|SYR_UREPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|189083554|sp|B1AIR8|SYR_UREP2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|11271728|pir||B82912 arginyl tRNA synthetase UU278 [imported] - Ureaplasma urealyticum gi|6899250|gb|AAF30687.1|AE002124_9 arginyl tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827541|gb|ACA32803.1| arginyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171902661|gb|EDT48950.1| arginyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|182675642|gb|EDT87547.1| arginyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186700707|gb|EDU18989.1| arginyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 550 Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 177/568 (31%), Positives = 295/568 (51%), Gaps = 57/568 (10%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 +I++++ ++ G TN AMILS+ L IA+ I + D ++ V + GF+N Sbjct: 26 KILVDKTKNIKFGDFYTNIAMILSKKNNKSSLEIAKEIANNFEQDLFLE-VNLQPPGFLN 84 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 L +L I +G+ K NIE+VSANPTG +H+ H A+ GD L Sbjct: 85 FKLKAKDHENLLKQIYYEKDRFGQ-FSKKNITYNIEYVSANPTGYLHIAHAANAIYGDIL 143 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+L+ GY+V EY+INDAG QI+ LA+SV RY Q L N + LP Y G + V Sbjct: 144 ANLLKIYGYDVETEYWINDAGNQIDKLAMSVLVRYLQ-LQNINIQLPADAYHGQEIHLVA 202 Query: 211 KELADKYSSELLNFPEEKWLPI--------VKDYSVQAMMKIIRDDLKALNIQHDIFISE 262 + L Y ++ +N + I +K+++V+ ++ I++DL ++N D + SE Sbjct: 203 QTLYQTYKNQFINVRLNEKYEIDDDIANQEIKNFAVKYLLNEIKNDLASINTFIDTYTSE 262 Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322 + + I +++ + Y +G L ++T GDD DR Sbjct: 263 NWIR--NSGRILEVLSKIKPYTYTLDG------------------ALWLKTTTFGDDKDR 302 Query: 323 PLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381 L+KSDGSYTYF D+AY K+ + +I V G+DH GY+ RL+A A+ + Sbjct: 303 VLIKSDGSYTYFTPDIAYHDYKFNKTNTTKLIDVWGTDHLGYIARLKAAMNALGYDPNNL 362 Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNSE-LLDFDF 439 ++ ++++L ++ K+SKR+G +T++ +V+ +G D++R F+ NS ++D D Sbjct: 363 EIVCAQVMKLVKNNQEFKLSKRSGQSLTIKDLVEIIGKDALRWFLGSSSMNSHVIIDVDI 422 Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF--DLFPRNVIPQESEFDTSELQ 497 K + NP++YVQYA+AR + K ++ +LDF DL +T E + Sbjct: 423 ALSKNNN--NPLYYVQYAHARANQVLN--KQVY-ELDFKTDLLT----------ETRERE 467 Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557 L+ L Y + I NA +EP++++ YLYDLA +FH ++++ + N NN+ L+ Sbjct: 468 LLNQLHFYKQTIANAANNREPHRISNYLYDLAQIFHNYYANVKIN------NDNNKVLSA 521 Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585 R LV V ++ +GL I+ + ++M Sbjct: 522 QRYTLVWCVKQVLANGLAIMKITPYDQM 549 >gi|171920791|ref|ZP_02931487.2| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|185179047|ref|ZP_02964791.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024320|ref|ZP_02997001.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518655|ref|ZP_03004094.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188524461|ref|ZP_03004470.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|198273663|ref|ZP_03206198.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554068|ref|YP_002284679.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225551313|ref|ZP_03772259.1| arginine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|171903551|gb|EDT49840.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|184209032|gb|EDU06075.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188018999|gb|EDU57039.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188997759|gb|EDU66856.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195659663|gb|EDX53043.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|198249691|gb|EDY74472.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541569|gb|ACI59798.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225379128|gb|EEH01493.1| arginine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] Length = 548 Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 176/569 (30%), Positives = 300/569 (52%), Gaps = 59/569 (10%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD-SVFIAGKGFI 89 ++++++ ++ G TN AM LS+ + PL +A+ I+ + D D+ V + GF+ Sbjct: 24 KVLVDKTKNIKFGDFYTNVAMTLSKRVNQSPLVVAKEIINNL--DQDLFFKVNLQPPGFL 81 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N L +L+ I +G+ K N+E+VSANPTG +H+ H A+ GD Sbjct: 82 NFTLKAKDHEDLLTQIYDQKDLFGQ-FAKKNITYNVEYVSANPTGYLHIAHAANAIYGDI 140 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 LA+L+ GY+V EY+INDAG QI+ LA+SV RY Q L N + +LP Y G + V Sbjct: 141 LANLLKIYGYDVKTEYWINDAGNQIDKLAMSVLVRYLQ-LQNINIELPTDAYHGQEIYLV 199 Query: 210 GKELADKYSSELLNFPEEKWLPI--------VKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 + L + Y + +N + I +K ++V ++ I+ DL ++N D + S Sbjct: 200 AQALYEIYKDQFINVRLNEKEEIDDVIVNEQIKKFAVSYLLDEIKKDLASINTYIDTYTS 259 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E+ I +++ + + Y +G L R+T GDD D Sbjct: 260 ENWIRSS--GRILEVLSKIKQHTYTLDG------------------ALWLRTTAFGDDKD 299 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKRLEAVAAAVSEKK 378 R L+KSDGSYTYF D+AY K+ + DN +I V G+DH GY+ RL+A +A+ Sbjct: 300 RVLIKSDGSYTYFTPDIAYHDYKFSK--DNTTKLIDVWGTDHLGYIARLKAAMSALGYDP 357 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNSE-LLD 436 + ++ ++++L ++ K+SKR+G +T++ +V+ +G D++R F+ NS ++D Sbjct: 358 NNLEIVCAQVMKLVKNNEEFKLSKRSGQSLTIKDLVEIIGKDALRWFLGSSSMNSHVVID 417 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 D K + NP++YVQYA+AR + K ++ +FD F +++ +T E Sbjct: 418 VDIALSKNNN--NPLYYVQYAHARANQVLN--KQVY---EFD-FKTDLL-----IETRER 464 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L Y + I NA +EP++++ YLYDLA +FH ++++ + N NN+ L+ Sbjct: 465 ELLNQLHFYKQTIANAANNREPHRISNYLYDLAQIFHNYYANIKINDE------NNKALS 518 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R LV V ++ +GL I+ + ++M Sbjct: 519 AQRYTLVWCVKQVLANGLAIMKITPYDQM 547 >gi|294155847|ref|YP_003560231.1| arginine--tRNA ligase [Mycoplasma crocodyli MP145] gi|291600461|gb|ADE19957.1| arginine--tRNA ligase [Mycoplasma crocodyli MP145] Length = 544 Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 185/584 (31%), Positives = 304/584 (52%), Gaps = 52/584 (8%) Query: 10 RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI- 68 +KN L E KI + K+ + P+ + ST+ A I+++ L+P+ +A I Sbjct: 5 EIKNKLLEELTKISKKLKLAKEPFLIEPK--TNADFSTSMA-IINKTTELNPVQLANKIK 61 Query: 69 --VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 + ++ + + + +AG GFIN++L + ++ ++ I+ G +YG+ + +N+E Sbjct: 62 DELNKVSKNLYLKDIEVAGPGFINIFLDDEFFKQSVNEILKKGSDYGKG--NRKGFLNLE 119 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 +VSANPTG +HVGH R A +G ++++ F+G +VTREYYINDAG QI+ LA S+F RYQ Sbjct: 120 WVSANPTGYLHVGHARNAAIGSAVSNICEFAGIKVTREYYINDAGNQIDMLANSLFARYQ 179 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW--LPIVKDYSVQAMMKI 244 Q +++ +PE Y G + +++ KY E E K L K V + Sbjct: 180 Q-IFDKKYKMPEECYKGDDITWAAEQMFKKYG-EKFKGDECKGDVLNTFKKDGVDLFLGE 237 Query: 245 IRDDLKALN-IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 + DL+ I+ DI++SE + D I++ + L + YV +G Sbjct: 238 VEKDLEKFGGIKFDIWMSEKSLYENDQKAIKETLKKL-KNSYVKDG-------------- 282 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY--ERGFDNMIYVMGSDHS 361 ++T+ GDD DR L+KSDGS TYF D+AY K+ E+G ++ V G+DHS Sbjct: 283 ----ATWLKTTIHGDDKDRVLIKSDGSLTYFTPDIAYHHIKFHREKGRTVVMNVWGADHS 338 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 GY+KR++ + E + VL +LVRL ++G KMSKR G LR +D VG DS Sbjct: 339 GYIKRMKCAIEDLGENPDDLVVLCMQLVRLVKNGEEYKMSKRKGTSFYLRDFIDLVGVDS 398 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 RF++L R + LDFD ++ +NP VQYA AR S+ ++ ++ F Sbjct: 399 ARFILLDRTYNSKLDFDIDIASNKTNDNPAILVQYANARAFSLLEKSTLDLKGIELSEFS 458 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 +EFD +LI L E+P +++ + + YL LA F+ +S+ Sbjct: 459 -------NEFDK---KLISTLLEFPEIVDRSAELYLTNLMTQYLIKLAKDFNSWYSN--- 505 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +P+ V + + +M L LV A +++ +G+ +IG+ ++M Sbjct: 506 SPK---VIGHENEESM--LSLVKATNTVLETGMKLIGITINHKM 544 >gi|322378816|ref|ZP_08053242.1| arginyl-tRNA synthetase [Helicobacter suis HS1] gi|321148740|gb|EFX43214.1| arginyl-tRNA synthetase [Helicobacter suis HS1] Length = 536 Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 172/575 (29%), Positives = 295/575 (51%), Gaps = 54/575 (9%) Query: 21 KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80 K +E+ + +++E P+D + GH ++ A L++ P IA +V R+ D + + Sbjct: 6 KTLLERVLQTEVILEHPKDRSLGHYASVVAFPLAKVYKKPPKIIALELVDRLLEDEECQA 65 Query: 81 VFI---AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMH 137 VF A G+IN L S+L + + + G+++G+ K + +EFVSANPTGP+H Sbjct: 66 VFAKIEALNGYINFTLKESFLDRFCNQALKLGVDFGKE-ADKNESLYLEFVSANPTGPLH 124 Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP 197 +GH R A+ GD+ +L F GY V EYY+ND GAQI L LS+ W + + + P Sbjct: 125 IGHARGAIFGDSFGNLARFLGYRVHTEYYVNDLGAQIKLLGLSL-WLAICEMQHLKVEYP 183 Query: 198 EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257 YY G Y+ + ++ + + LN + + D++ + ++ I L L I + Sbjct: 184 TEYYRGAYINELAQKALEHFPD--LNNNDPNLYATLGDFAKEVVLAQIEQSLADLGIVIE 241 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 + SE R + ++ L + G VYE + K+ L +S+M G Sbjct: 242 NYASE----RAMFAHQEEVFKRLEQAGGVYE---------------FEGKRWL-KSSMFG 281 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 D+ DR + K+DG +TY A D+ Y K+++GFD+ I + G+DH GYV R++A + + Sbjct: 282 DEKDRVIRKNDGDFTYIAGDITYHDYKFKQGFDHYINIFGADHHGYVARIKAALQFLGYE 341 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437 ++ VLL ++V L ++G P KMSKRAG+ + L V++++G D++RF+ L +K L+F Sbjct: 342 AQKLEVLLVQMVALLQNGKPYKMSKRAGNSVLLSDVLEDMGKDALRFVFLSKKLDTHLEF 401 Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE-FDTSEL 496 D +++Q NP+FY+ YA AR ++ + F + L + ++ E S Sbjct: 402 DIASLQKQDSSNPIFYIHYANARIHTMLEK---FFQKPNASL--QAILSSSLENLPESGG 456 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR------ENPRLRFVQA 550 L+ + P++++ A +E K+ YL LA+ FH ++ R E P L+ Q Sbjct: 457 ALLFNALNLPKILQTAFQDRELQKICDYLKGLAADFHSFYNAYRILDTPQELPYLKLCQM 516 Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + LT+ GL ++G+E+ +M Sbjct: 517 VSLSLTI---------------GLKLLGIEAKRKM 536 >gi|195867603|ref|ZP_03079605.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|195660660|gb|EDX53915.1| arginyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] Length = 547 Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 176/569 (30%), Positives = 300/569 (52%), Gaps = 59/569 (10%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD-SVFIAGKGFI 89 ++++++ ++ G TN AM LS+ + PL +A+ I+ + D D+ V + GF+ Sbjct: 23 KVLVDKTKNIKFGDFYTNVAMTLSKRVNQSPLVVAKEIINNL--DQDLFFKVNLQPPGFL 80 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N L +L+ I +G+ K N+E+VSANPTG +H+ H A+ GD Sbjct: 81 NFTLKAKDHEDLLTQIYDQKDLFGQ-FAKKNITYNVEYVSANPTGYLHIAHAANAIYGDI 139 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 LA+L+ GY+V EY+INDAG QI+ LA+SV RY Q L N + +LP Y G + V Sbjct: 140 LANLLKIYGYDVKTEYWINDAGNQIDKLAMSVLVRYLQ-LQNINIELPTDAYHGQEIYLV 198 Query: 210 GKELADKYSSELLNFPEEKWLPI--------VKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 + L + Y + +N + I +K ++V ++ I+ DL ++N D + S Sbjct: 199 AQALYEIYKDQFINVRLNEKEEIDDVIVNEQIKKFAVSYLLDEIKKDLASINTYIDTYTS 258 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E+ I +++ + + Y +G L R+T GDD D Sbjct: 259 ENWIRSS--GRILEVLSKIKQHTYTLDG------------------ALWLRTTAFGDDKD 298 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKRLEAVAAAVSEKK 378 R L+KSDGSYTYF D+AY K+ + DN +I V G+DH GY+ RL+A +A+ Sbjct: 299 RVLIKSDGSYTYFTPDIAYHDYKFSK--DNTTKLIDVWGTDHLGYIARLKAAMSALGYDP 356 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNSE-LLD 436 + ++ ++++L ++ K+SKR+G +T++ +V+ +G D++R F+ NS ++D Sbjct: 357 NNLEIVCAQVMKLVKNNEEFKLSKRSGQSLTIKDLVEIIGKDALRWFLGSSSMNSHVVID 416 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 D K + NP++YVQYA+AR + K ++ +FD F +++ +T E Sbjct: 417 VDIALSKNNN--NPLYYVQYAHARANQVLN--KQVY---EFD-FKTDLL-----IETRER 463 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L Y + I NA +EP++++ YLYDLA +FH ++++ + N NN+ L+ Sbjct: 464 ELLNQLHFYKQTIANAANNREPHRISNYLYDLAQIFHNYYANIKINDE------NNKALS 517 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R LV V ++ +GL I+ + ++M Sbjct: 518 AQRYTLVWCVKQVLANGLAIMKITPYDQM 546 >gi|26554064|ref|NP_757998.1| arginyl-tRNA synthetase [Mycoplasma penetrans HF-2] gi|81747673|sp|Q8EVF2|SYR_MYCPE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|26454072|dbj|BAC44402.1| arginyl tRNA synthetase [Mycoplasma penetrans HF-2] Length = 564 Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 176/577 (30%), Positives = 288/577 (49%), Gaps = 69/577 (11%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD--VDSVFIAGK 86 L+ V+++ + G +N AMIL+ L +P+ IAE I +K +S Sbjct: 28 LNDFVVDKAKSIEFGDFYSNVAMILASKLKKNPILIAEEICEYLKNHKTNLFESTEAVKP 87 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV--NIEFVSANPTGPMHVGHCRCA 144 G+IN++LS S + I YG I + KV NIEFVSANPTG +H+GH R A Sbjct: 88 GYINVFLSNSVKSDLFKQINKDKDTYG---IFEPKKVAYNIEFVSANPTGSLHIGHARNA 144 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG- 203 +G TL ++ GY + +EYYIND G QIN L +SVF+RY Q D + E +Y G Sbjct: 145 ALGQTLGNVWKAYGYTIEQEYYINDGGNQINNLGMSVFYRYLQKC-GKDVQMEEDFYQGS 203 Query: 204 --------VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255 +Y +H K + KYS+ + +EK +D+S +M II+ DLK ++ Sbjct: 204 EPIAVAELIYKEHKDKFVNVKYSATKI--EDEKVFDFFRDFSKTELMNIIKKDLKDFSVH 261 Query: 256 HDIFISEDDFHRG---DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312 D + E + DP+ I L + YVYE L + Sbjct: 262 FDRYFPESKIYEMKLVDPT-----IKKLGK--YVYEK----------------DGALWLK 298 Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF-----DNMIYVMGSDHSGYVKRL 367 +T GDD DR ++KSD S+TYF D+AY K R D + + G+DH+ YV R+ Sbjct: 299 TTEFGDDKDRVIVKSDKSFTYFMPDIAYHDIKATRTINGLKTDKIFNIWGADHASYVDRM 358 Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 + KK ++V++ ++V+L ++G KMSKR+G+ +TLR +++ +G D+ R+ ++ Sbjct: 359 TVALQCLGFKKDIMHVIVMQMVKLTKNGKEFKMSKRSGNSLTLRDLINAIGVDNSRWELI 418 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD---LDFDLFPRNV 484 + ++ D K + + YV YAY+R + I + + + + + DL Sbjct: 419 SQAAESHIEIDVEKFTSADSTSNLSYVLYAYSRIQKILEKNESLLKESKSYNTDLLT--- 475 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 + E +I L YP+ I N + E +K+ +LY LA++ H ++S Sbjct: 476 -------NLKEKDMIAMLFYYPQTIANIAKSYEVHKIPIFLYTLANLLHSYYS------E 522 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 ++ + +N++L + RL L+ V +I +GL ++ +E+ Sbjct: 523 VKIIDESNKELLIQRLHLLQCVNQVIKNGLKLLDIEA 559 >gi|54019981|ref|YP_115527.1| arginyl-tRNA synthetase [Mycoplasma hyopneumoniae 232] gi|81378818|sp|Q602D8|SYR_MYCH2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|53987154|gb|AAV27355.1| arginyl-tRNA synthetase [Mycoplasma hyopneumoniae 232] Length = 534 Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 174/567 (30%), Positives = 308/567 (54%), Gaps = 56/567 (9%) Query: 23 KVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVD 79 K E I+D +++IE+ ++ G S+N A+I ++ +D L +A+ I ++ + +++ Sbjct: 14 KNENLIIDESKLIIEKSKN--FGDYSSNVALIFAKQNKIDSLKLAQTIKNQLLSENLNLE 71 Query: 80 SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139 + IA GFIN ++S + I+S I+ G +GR + K K+N+EFVSANPTG +H+G Sbjct: 72 KIEIAPPGFINFFISKNEYANIVSEIIQKGENFGRYSLQK--KINLEFVSANPTGFLHLG 129 Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199 H R AV+GD LA+++ FSG V REYYIND G+QI+ L SVF RYQQ LPE Sbjct: 130 HLRGAVIGDILANILEFSGNFVFREYYINDFGSQIDRLVGSVFSRYQQIF--KKFPLPEE 187 Query: 200 YYPGVYLKHVGKELADKYSSELLN--FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257 Y G + ++ Y+++ N + + I ++ S++ + I+ DL L+I+ D Sbjct: 188 AYLGEDIIWCAQKFFQIYANKFENSSLDDLEAYKIFREKSIEIFLDEIKADLANLSIKFD 247 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 +F SE + R + + NLA +VY+ + + +++ G Sbjct: 248 VFSSESELFRTEK-----VQKNLANLPFVYK----------------KEEAIWLKTSKFG 286 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSGYVKRLEAVAAAVS 375 D DR L+K +G +TYF++D+AY K F D +I + G+DH GYV R++A V+ Sbjct: 287 DQKDRVLVKKNGEFTYFSSDIAYHFEKINSNFKPDFLINIWGADHIGYVDRMKAALKTVN 346 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435 + ++++LL +LV+L+++G KMSKR G T++ +++ V D++R+ + R + L+ Sbjct: 347 LNQ-KLDILLYQLVKLFKNGQEFKMSKRMGKTFTIKDLLELVDQDAIRYFISERSYNSLV 405 Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495 +FD + S +NP+F +QYA+AR + + + P + E+E +E Sbjct: 406 EFDIGLAAKISLQNPLFLIQYAHARASKLLANS---------TIAPEKKLKFEAE---NE 453 Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555 LI L ++ ++ T + L YL +LA++F+ +S+ + + N + Sbjct: 454 TILISKLKQFEEIVLKITKNYKINLLNKYLLELANLFNSFYSNSK-------IIGNQNQN 506 Query: 556 TMMRLQLVHAVASIINSGLNIIGVESP 582 ++ L L AV ++ +GL ++G+++ Sbjct: 507 SL--LSLTKAVQIVLKNGLKLLGIKAK 531 >gi|315638909|ref|ZP_07894081.1| arginine--tRNA ligase [Campylobacter upsaliensis JV21] gi|315481127|gb|EFU71759.1| arginine--tRNA ligase [Campylobacter upsaliensis JV21] Length = 530 Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 169/560 (30%), Positives = 278/560 (49%), Gaps = 43/560 (7%) Query: 27 KILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85 KIL R ++E P+D A H +T A L++ P IA + + + + V A Sbjct: 11 KILGRDFILENPKDKALAHFATPLAFSLAKEFKKAPALIAADLALKFEDHFYFEKV-EAV 69 Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 G++N LS ++L + + E+G+ K +E+VSANPTGP+H+GH R A+ Sbjct: 70 NGYLNFRLSKAFLDTLAKKALKQPDEFGKGK-AKNESFLLEYVSANPTGPLHIGHARGAI 128 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205 GDTLA + GY+ EYY+NDAG QI+ L LSV + + N + + PE Y G Y Sbjct: 129 FGDTLARVARHLGYKFDTEYYVNDAGNQIDLLGLSVLSKVKILCLNEELEYPENAYKGEY 188 Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 + + +E + + L ++ M+ +I+ +L NI D ++SE + Sbjct: 189 IDDLAREAFANFEKDFFTMDNVSNLAF---WAKDKMLDLIKQNLAQANIIIDHYVSERSY 245 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 + + + D I +L G VYE ++ S++ GD+ DR ++ Sbjct: 246 Y----NALEDTIRSLKAHGGVYE----------------KDYKIWLASSLKGDEKDRVIV 285 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 + DG TY AAD+ Y K K RG+D I + G+DH GY+ R++A + + ++L Sbjct: 286 RDDGRGTYLAADIVYHKDKMSRGYDKCINIWGADHHGYIPRMKAAIEFLGFNPQNLEIIL 345 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 ++V L +D P KMSKRAG+FI + ++DE+GSD++RF+ L +K L+FD +K++ Sbjct: 346 AQMVSLLKDNQPYKMSKRAGNFILMSEILDEIGSDALRFIFLSKKCDTHLEFDIDILKKE 405 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 NP+FY+ YA+AR + IF +A D+ V S + L+ Sbjct: 406 DSSNPIFYINYAHARVKQIFLKAGKSLDDV--------VEADLSNLNDEATNLLFEALNL 457 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 V+ +A + K+ YL LA+ FH + R V + ++ L+L Sbjct: 458 GSVLNDAFEQRALQKIPDYLKGLAASFHKFYYENR-------VIGTENEDSL--LKLFAL 508 Query: 566 VASIINSGLNIIGVESPNEM 585 VA I +G ++G+ + ++M Sbjct: 509 VALSIKTGFALMGIRAKDKM 528 >gi|86609400|ref|YP_478162.1| arginyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)] gi|109895046|sp|Q2JK96|SYR_SYNJB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|86557942|gb|ABD02899.1| arginyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 598 Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 173/574 (30%), Positives = 303/574 (52%), Gaps = 41/574 (7%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 VI+ P D +G + + +++ L P IA+ + + + PD+++ +AG G++N Sbjct: 45 VIQIPSDPRYGDYACPTPLGMAKLCRLAPAQIAQTLQKHLDL-PDIETQ-VAGGGYLNFR 102 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L +L K L ++ G +G+ I ++ +EFVSANPTGP+HVGH R A VG TLA+ Sbjct: 103 LGDPFLAKRLQELLHLGENFGKTAIPHPERILLEFVSANPTGPLHVGHGRWAAVGSTLAN 162 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 L+ ++G++V RE+YINDAG Q+ L S+ R +Q L + LPE Y G YL + + Sbjct: 163 LLHWTGHQVEREFYINDAGNQMRLLGQSLEVRVRQ-LQGEEVALPEDAYHGSYLVDIARR 221 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP-- 270 L + + + P L D++ M+ + L+ L + D + SE H DP Sbjct: 222 LLGQVKAGIRPLPTT--LEEYTDFAYGEMLAWQKQTLQQLRTEFDHWFSERRLHTPDPQT 279 Query: 271 --SPIRDIIDNLARQGYVYEGILP---PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 S I+ + L +G++Y+ P PK + + F++ GDD DR + Sbjct: 280 GLSAIQQALQELQERGFLYKAKAPRGEDPKPGAEEA-------VYFKTQEFGDDKDRVVQ 332 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 K+DGS+TY AAD+AY + K +RG+ +I ++GSDH GY+ RL+A A S ++ +L+ Sbjct: 333 KADGSFTYLAADIAYHRDKVQRGYHRLINILGSDHHGYIGRLKAAVGAFS-PDVKLEILI 391 Query: 386 CELVRLYR------DGMPIKMSKRAGDFITLRHVVDE----VGSDSVRFMMLWRKNSELL 435 + V+L++ + ++MSKR G+F++L ++++ VG D+ R+ +L + Sbjct: 392 GQFVKLFKTDPQTGEKTEVRMSKRTGNFVSLNDLIEDPEIGVGVDAARWFLLSSSMDSPI 451 Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495 +FD +Q+ +NPV YV Y++ARC ++ R+ ++ + +L + + ++ + E Sbjct: 452 NFDLDLAVKQTFDNPVVYVHYSHARCCTLLRRLQE---EEKVELTNKVPLTEQQKLPYKE 508 Query: 496 ---LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552 L++ L P + A + P+K+ Y +A+ F+ + + R P L+ + Sbjct: 509 PEERALLLRLLALPDELIAAAEERAPHKIIRYAEAIAADFNKFYDNCRILPLLK----ED 564 Query: 553 RKLTMMRLQLVHAVASII-NSGLNIIGVESPNEM 585 L R+QLV A ++ N I+G+ +P M Sbjct: 565 PLLAQARIQLVQATQQVLFNVLTGILGLSAPESM 598 >gi|187251307|ref|YP_001875789.1| arginyl-tRNA synthetase [Elusimicrobium minutum Pei191] gi|254782964|sp|B2KD56|SYR_ELUMP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|186971467|gb|ACC98452.1| Arginyl-tRNA synthetase [Elusimicrobium minutum Pei191] Length = 532 Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 176/541 (32%), Positives = 271/541 (50%), Gaps = 48/541 (8%) Query: 45 LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104 +S AM ++ L +PL IA+ V I V S A GFIN+ L S+ I SS Sbjct: 40 ISLTWAMSAAKTLKKNPLEIAKAAVKVISEVTFVASASYAAPGFINIILEDSF---ISSS 96 Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164 + ++ + +V IEFVSANPTGP+HV R A +GD+L + G + E Sbjct: 97 ALDRRLKNRKTAGENKERVLIEFVSANPTGPLHVASGRGASLGDSLVRIFNALGIQCDSE 156 Query: 165 YYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF 224 YY+ND+G Q L +S+ R N + PE Y G YL E+AD+ ++ Sbjct: 157 YYVNDSGNQAMLLGVSLKARV------NGQEPPENGYHGSYLI----EMADEIREMSKDW 206 Query: 225 PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG 284 EE++ Y+++ ++K + D++A N+ + E + ++ + P + +D L +G Sbjct: 207 TEEQF----SIYAIEYLIKTHQRDMQAFNVNFTRWFRESELYK-ESLPAK-ALDFLKEKG 260 Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK 344 YE + F +T DD DR L+++DG TYF AD+AY K K Sbjct: 261 LAYEA----------------DGAVWFGTTKDNDDKDRVLVRADGRPTYFLADIAYHKNK 304 Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404 Y+RGF ++ ++G+DH GYV R++A A+ E + ++ +LV L G +KMSKR+ Sbjct: 305 YDRGFTTLVDILGADHHGYVPRMKAAVKALGENEESFVPIIHQLVHLIEGGEKVKMSKRS 364 Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 G FITL+ + +EVG+D+ RF+ R ++FD K+++ ENPVFYVQY +AR SI Sbjct: 365 GRFITLKELTEEVGADACRFLFASRTPDAHMNFDIDLAKKRTNENPVFYVQYVHARAASI 424 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R A+ +L + PQE L++ + + ++N P+ L Y Sbjct: 425 ARMAEQKHLQQAENLVDFKLTPQER-------TLLIKILWFKHALKNCVRDMSPHHLTTY 477 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 L +LA FH + R V +N + T RL + V I GL +GV +P E Sbjct: 478 LIELAGNFHSFYD------ACRVVDEDNPQTTAHRLLICDRVRERIKKGLEFLGVSAPEE 531 Query: 585 M 585 M Sbjct: 532 M 532 >gi|256372578|ref|YP_003110402.1| arginyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331] gi|256009162|gb|ACU54729.1| arginyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331] Length = 540 Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 177/552 (32%), Positives = 275/552 (49%), Gaps = 50/552 (9%) Query: 37 PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI--KIDPDVDSVFIAGKGFINLYLS 94 PR+ AHG L+T A+ L+R +G+ P +AE +VAR+ ++ V+ + +AG GF+N++LS Sbjct: 36 PRERAHGDLATPIALELARTVGVAPRVLAEALVARLEPRVAGRVERLEVAGPGFVNIHLS 95 Query: 95 PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154 P+ L + ++ +G G + +EFVSANPTGP+H+G+ ++ GD LA L+ Sbjct: 96 PAALLGDVQAMAADLAAALAVDVGHGARALVEFVSANPTGPLHIGNGWLSIYGDALARLL 155 Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214 A G+EV+REYY+ND G QI +L S+ +PE Y G Y+ EL+ Sbjct: 156 AHGGFEVSREYYVNDTGGQIRSLGASIL------AARRGEPIPEEGYRGDYVH----ELS 205 Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274 +Y + P++ + ++V ++ +IR L+ LNI D + S+ G Sbjct: 206 GRY-----DGPDD--VVAAGSWAVPEILAMIRATLEELNIHFDSWYSQAAIEGG------ 252 Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334 G V E + T + D L F + GD DR L K++G YTY Sbjct: 253 ---------GLVEEVVARLSALDATYEAD---GALWFAAERFGDTRDRVLRKANGDYTYL 300 Query: 335 AADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393 A D+AY K RGFD I V G+DH G V L A A+ ++ + L ++V L Sbjct: 301 AGDIAYHYDKLVVRGFDLAIDVFGADHHGQVASLHAAMRALGIDDRRLEIRLGQMVSLLD 360 Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453 +G +K SKRAG I L +V E+G+D+ R + L D K + +S ENPV+Y Sbjct: 361 NGAAVKFSKRAGTAIALSWLVKELGADATRLLALSSSIDRASQVDLVKARAESSENPVYY 420 Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513 +QYA+AR ++ RQA + LD P + EL+L L RV+E A Sbjct: 421 IQYAHARVAALRRQAAAMGLALD----PAASLTALGH--PRELELARVLLRLNRVLETAI 474 Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573 + + P+++ +L + AS FHG + + P + + + R L ++ Sbjct: 475 VERAPHRVVAWLLEAASAFHGFY---HDCP---ILVEPDPLVRGARFALADLTGQVLART 528 Query: 574 LNIIGVESPNEM 585 L +IGV + EM Sbjct: 529 LALIGVRAVEEM 540 >gi|242309623|ref|ZP_04808778.1| arginyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489] gi|239523624|gb|EEQ63490.1| arginyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489] Length = 521 Score = 259 bits (663), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 161/565 (28%), Positives = 282/565 (49%), Gaps = 54/565 (9%) Query: 26 KKILDRI-----VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80 KKI+D V+E+PRD GH + ++ L P IA+ ++ ++ S Sbjct: 6 KKIVDETLGITSVLEQPRDKKFGHFAL-PTFSFAKTLKKSPQEIAQNFAKSLESLEEISS 64 Query: 81 VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140 + I G++N +LS +L + + K + +E+VSANPTGP+H+GH Sbjct: 65 INIIN-GYVNFFLSDKFLETCTKDFL-------KPYAPKKETILLEYVSANPTGPLHIGH 116 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R A+ GD+L+ + + GY + EYYINDAG QI L S+++ + +LPEG Sbjct: 117 ARGAIFGDSLSRIGKYLGYSIATEYYINDAGVQIENLGKSIYFAGRHLFLGESYELPEGC 176 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G Y+ + K+ + + E+ F + + + M+ I+ +L + I D F+ Sbjct: 177 YKGEYILELAKDAKESFGMEI--FENADSIAKLSLFGKDKMLDEIKSNLAEIGIFFDHFV 234 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE + + S + + N +YE ++ +ST GD+ Sbjct: 235 SEKELYAQWDSTLELLRANNG----IYE----------------QEGKIWLKSTEFGDEK 274 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR +++ +G TY A D+ Y K K ER F+ I + G+DH GY+ R++A + + ++ Sbjct: 275 DRVIVRENGEPTYLAGDIIYHKNKMERNFNQYINIWGADHHGYIARVKAAIEFLGYESSK 334 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + +LL ++V L + G KMSKRAG+FI ++ VV++VG+D++R + L +K L+FD Sbjct: 335 LEILLSQMVALLKGGEAYKMSKRAGNFILMKDVVEDVGADALRLIFLSKKADTHLEFDVE 394 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500 +K+Q NPV+Y+ YA+AR ++F ++++ + D + S L+V Sbjct: 395 DLKKQDSSNPVYYINYAHARIHTLFEKSQNSLDNFTKDF---------TNLSESLRDLLV 445 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 +V+E++ + P K+ YL LA FH ++ + + N K + L Sbjct: 446 LALNLSKVLEDSFTQRNPQKVVEYLRTLAGEFHHFYNEE------KILNTPNEKQILSVL 499 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 + VA +N+GL ++G+++ M Sbjct: 500 SI---VAQSLNAGLALLGIQAKKSM 521 >gi|193216533|ref|YP_001999775.1| arginyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1] gi|238692472|sp|B3PM19|SYR_MYCA5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|193001856|gb|ACF07071.1| arginyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1] Length = 541 Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 181/571 (31%), Positives = 296/571 (51%), Gaps = 59/571 (10%) Query: 29 LDRIVIERP----RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI--KIDPDVDSVF 82 L+++ I++P ++G STN A+ L + LG + IA+ IV I K ++ V Sbjct: 16 LEKLEIKKPITLTEPKSYGDYSTNLALTLQKELGKPAIEIAKEIVNAIDLKKHKEIVKVE 75 Query: 83 IAGKGFINLYLSPSYLRKILSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTGPMHVGHC 141 +A GFIN ++S S L +++SI YG + GKG VNIEFVSANPTG +H+GH Sbjct: 76 VANPGFINFWVSNSVLSDLVNSINSLEDHYGDMSKEGKGA-VNIEFVSANPTGFLHIGHA 134 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYY 201 R A +G TL +++ +G+ V REYY+ND G Q+N LA SVF RYQQ ++N D +P+ Y Sbjct: 135 RNAAIGATLCNVLEKAGHRVVREYYVNDYGNQMNNLAASVFSRYQQ-IFNKDFPMPDDAY 193 Query: 202 PGVYLKHVGKELADKYSSELLNFP-EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 G + KY + N E+ + +D+ + ++ I+ DL + D++ Sbjct: 194 KGHDMTIFADAFFKKYGDKYRNVAYTEEVKKLFRDFGREIALENIKIDLGRFGVWFDLYT 253 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE Q Y + + P + + + D L + DD Sbjct: 254 SE-------------------TQQYEKDRVWPVIR-RLKSTYEKDGATWLNTTKGGNDDK 293 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKY------ERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374 DR ++K +G TY AD+AY + K+ E+G +I + G+DHSGYV+R++ + Sbjct: 294 DRVIIKGNGESTYMCADIAYHEQKFVELHDPEKG--KIIDIWGADHSGYVERIKFSFEDL 351 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434 ++ QI +LL +L+R+ ++G IKMSKR G +TLR ++D VG D+VR+ ++ R + Sbjct: 352 GWRRDQIEILLFQLLRVVKNGKEIKMSKRLGTSLTLRELLDLVGKDAVRYFLIERSYNSK 411 Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494 +DFD KV++ + NP+F ++YA+ARC + +A+ +N I E D + Sbjct: 412 IDFDINKVQKSDETNPLFLIKYAHARCYQLLEKAQ-----------IKNPIASNLENDFA 460 Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554 + +L L EYP +I+ + L YL LA F+ +S+ V+ + Sbjct: 461 Q-KLTNELKEYPNLIDTMAKTYKVNLLPPYLLKLAGAFNSFYSN---------VRISGDP 510 Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L LV A ++ + + ++ ++ PN+M Sbjct: 511 NEQSYLALVKATKIVLANAMKLMDLDIPNKM 541 >gi|116327967|ref|YP_797687.1| arginyl-tRNA synthetase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330848|ref|YP_800566.1| arginyl-tRNA synthetase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122281398|sp|Q04TG2|SYR_LEPBJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|122284241|sp|Q052J1|SYR_LEPBL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|116120711|gb|ABJ78754.1| Arginine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116124537|gb|ABJ75808.1| Arginine--tRNA ligase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 586 Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 188/590 (31%), Positives = 294/590 (49%), Gaps = 64/590 (10%) Query: 24 VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSVF 82 VEK L RI IE RD G ST+ ++ S+ L +P+ +++ +V ++ D+ + V Sbjct: 29 VEKSSL-RIKIEYSRDEKFGDYSTSFSLENSKLLKRNPIQVSKELVEILQKRTDLFEKVD 87 Query: 83 IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 GF+N +SPSYL + + ++SG + + + K+N+EFVSANPTGP+++ R Sbjct: 88 FTPPGFVNFKISPSYLLEYIEKSILSGDHFPK--VEHPLKINLEFVSANPTGPLNIVSAR 145 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY----------QQALYNN 192 A GDT+ASL+ G+ V +E+YIND G Q+ L +S R Q+A Sbjct: 146 AAANGDTMASLLKAIGHNVDKEFYINDYGNQVFLLGVSTLVRIREIKGEFSTRQEADDTT 205 Query: 193 DSD-------LPEGYYPGVYLKHVGKELAD--KYSSELLNFPEEK----WLPIVKDYSVQ 239 D LP Y G Y+K + L + K SS++ +EK + ++V+ Sbjct: 206 PIDTILEKNILPAEGYRGEYIKDIANALLNEPKKSSQIETLLKEKKYRELAELCSIWTVE 265 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 + R DL + ++ D + E H D + ++ +L R G ++E Sbjct: 266 NNLDWQRKDLDSFGVEFDNYFRERTLHESDK--VLAVMKDLERVGKIFE----------- 312 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + +FRST GDD DR +++ DG TY AD+AY K K ERG+D + + G D Sbjct: 313 -----EDGKKIFRSTEYGDDKDRVVVRDDGRPTYLLADIAYHKDKIERGYDRIYDIWGPD 367 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV---DE 416 H GY+ RL + KK V++ + V L G +KMSKRAG F T+ ++ + Sbjct: 368 HHGYISRLSGAVQTLGYKKENFKVIISQQVNLLESGQKVKMSKRAGSFQTMSDLIGFLGK 427 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 G D R+ + R LDFD ++QS +NPVFY+QYA+AR SIFR+ Sbjct: 428 HGKDVGRYFFVMRSLDAPLDFDLDLAQDQSDKNPVFYLQYAHARICSIFREVGT------ 481 Query: 477 FDLFPRNVIPQES-EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + ES E +L+ +A +P I ++ + EP+++A YL A F G Sbjct: 482 ----ESSAEAAESLEMSEERKRLLFWIARFPEEIFDSANSMEPHRVANYLQSFAKAFTGF 537 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +N RL+ R L + R+ L A S++ GL +IGV +P +M Sbjct: 538 YLG--KNNRLKDATPEVR-LGLARICL--AARSVLAEGLGLIGVSAPEKM 582 >gi|308189960|ref|YP_003922891.1| hypothetical protein MFE_04110 [Mycoplasma fermentans JER] gi|319777242|ref|YP_004136893.1| arginyl-tRNA synthetase [Mycoplasma fermentans M64] gi|307624702|gb|ADN69007.1| hypothetical protein MFE_04110 [Mycoplasma fermentans JER] gi|318038317|gb|ADV34516.1| Arginyl-tRNA synthetase [Mycoplasma fermentans M64] Length = 542 Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 189/578 (32%), Positives = 293/578 (50%), Gaps = 56/578 (9%) Query: 15 LKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK- 73 LK I K+ +EK D ++IE P+ ++N A+ G +P+ +A+ IV ++ Sbjct: 14 LKPILNKLGIEK---DDLLIE-PK--VKADFASNVAL---GNKGKNPMELAKKIVKELEP 64 Query: 74 --IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131 + SV IA GF+N Y+ + K L+ I+ +GR + KG +NIE+VSAN Sbjct: 65 KLTSLGLKSVEIAAPGFLNFYIDDQTIIKSLNQIIKQNENFGRGKL-KGN-LNIEWVSAN 122 Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 PTG +H+GH R A +G L ++ F+G V REYYIND G QINTLA S+F RY+Q Y Sbjct: 123 PTGYLHIGHARNAAIGSALYNICTFAGLNVLREYYINDGGNQINTLAQSIFARYKQ-FYE 181 Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMKIIRDDL 249 D +PE Y G + +++ K+ + + E ++ L + K V +K I+ DL Sbjct: 182 PDFPMPEDCYGGQDIVWNAEQIRTKHGDKFKDLKELNDEALKVFKKEGVANFLKQIKVDL 241 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 K DI+ SE + + I D I L + + +G Sbjct: 242 KKFKCGFDIWFSEKTLYANNSKRILDTIKKL-KNHFEADG------------------AT 282 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY-VMGSDHSGYVKRL 367 R+T GDD DR ++KS+G +TYFA D+AY K++ G D +I + G+DH Y+ R+ Sbjct: 283 WLRTTKYGDDKDRVVIKSNGDFTYFAPDIAYHDKKFKNSGKDPIIMNIWGADHLSYITRM 342 Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 + + ++ VL +LVRL +DG KMSKR G LR VD VG DS RF++L Sbjct: 343 KIAMQDLGYDPNKLIVLCLQLVRLMKDGQEYKMSKRKGTSFWLRDFVDLVGVDSARFILL 402 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487 R + LDFD +S +NPVF +QYA AR + +++K D+ Sbjct: 403 DRTYNSKLDFDINIATSKSNDNPVFLIQYANARSYQLLKKSK-------LDVSKLKATNI 455 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 ++E D +L+ L E+P VI ++ + L YL +A F+ +S+ + Sbjct: 456 DNELDK---KLVSTLLEFPEVIISSATKYLTHLLTQYLIRVAKEFNSWYSNTE-----KI 507 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + N M L + AV ++ +GL ++GV S ++M Sbjct: 508 IGSKNE---MNSLTIARAVNIVLENGLRLLGVSSKHKM 542 >gi|225550759|ref|ZP_03771708.1| arginine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225379913|gb|EEH02275.1| arginine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 548 Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 175/569 (30%), Positives = 299/569 (52%), Gaps = 59/569 (10%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD-SVFIAGKGFI 89 ++++++ ++ G TN AM LS+ + L +A+ I+ + D D+ V + GF+ Sbjct: 24 KVLVDKTKNIKFGDFYTNVAMTLSKRVNQSSLVVAKEIINNL--DQDLFFKVNLQPPGFL 81 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N L +L+ I +G+ K N+E+VSANPTG +H+ H A+ GD Sbjct: 82 NFTLKAKDHEDLLTQIYDQKDLFGQ-FAKKNITYNVEYVSANPTGYLHIAHAANAIYGDI 140 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 LA+L+ GY+V EY+INDAG QI+ LA+SV RY Q L N + +LP Y G + V Sbjct: 141 LANLLKIYGYDVKTEYWINDAGNQIDKLAMSVLVRYLQ-LQNINIELPTDAYHGQEIYLV 199 Query: 210 GKELADKYSSELLNFPEEKWLPI--------VKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 + L + Y + +N + I +K ++V ++ I+ DL ++N D + S Sbjct: 200 AQALYEIYKDQFINVRLNEKEEIDDVIVNEQIKKFAVSYLLDEIKKDLASINTYIDTYTS 259 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E+ I +++ + + Y +G L R+T GDD D Sbjct: 260 ENWIRSS--GRILEVLSKIKQHTYTLDG------------------ALWLRTTAFGDDKD 299 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKRLEAVAAAVSEKK 378 R L+KSDGSYTYF D+AY K+ + DN +I V G+DH GY+ RL+A +A+ Sbjct: 300 RVLIKSDGSYTYFTPDIAYHDYKFSK--DNTTKLIDVWGTDHLGYIARLKAAMSALGYDP 357 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR-FMMLWRKNSE-LLD 436 + ++ ++++L ++ K+SKR+G +T++ +V+ +G D++R F+ NS ++D Sbjct: 358 NNLEIVCAQVMKLVKNNEEFKLSKRSGQSLTIKDLVEIIGKDALRWFLGSSSMNSHVVID 417 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 D K + NP++YVQYA+AR + K ++ +FD F +++ +T E Sbjct: 418 VDIALSKNNN--NPLYYVQYAHARANQVLN--KQVY---EFD-FKTDLL-----IETRER 464 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L Y + I NA +EP++++ YLYDLA +FH ++++ + N NN+ L+ Sbjct: 465 ELLNQLHFYKQTIANAANNREPHRISNYLYDLAQIFHNYYANIKINDE------NNKALS 518 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R LV V ++ +GL I+ + ++M Sbjct: 519 AQRYTLVWCVKQVLANGLAIMKITPYDQM 547 >gi|238809911|dbj|BAH69701.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 550 Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 189/578 (32%), Positives = 293/578 (50%), Gaps = 56/578 (9%) Query: 15 LKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK- 73 LK I K+ +EK D ++IE P+ ++N A+ G +P+ +A+ IV ++ Sbjct: 22 LKPILNKLGIEK---DDLLIE-PK--VKADFASNVAL---GNKGKNPMELAKKIVKELEP 72 Query: 74 --IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131 + SV IA GF+N Y+ + K L+ I+ +GR + KG +NIE+VSAN Sbjct: 73 KLTSLGLKSVEIAAPGFLNFYIDDQTIIKSLNQIIKQNENFGRGKL-KGN-LNIEWVSAN 130 Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 PTG +H+GH R A +G L ++ F+G V REYYIND G QINTLA S+F RY+Q Y Sbjct: 131 PTGYLHIGHARNAAIGSALYNICTFAGLNVLREYYINDGGNQINTLAQSIFARYKQ-FYE 189 Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMKIIRDDL 249 D +PE Y G + +++ K+ + + E ++ L + K V +K I+ DL Sbjct: 190 PDFPMPEDCYGGQDIVWNAEQIRTKHGDKFKDLKELNDEALKVFKKEGVANFLKQIKVDL 249 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 K DI+ SE + + I D I L + + +G Sbjct: 250 KKFKCGFDIWFSEKTLYANNSKRILDTIKKL-KNHFEADG------------------AT 290 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY-VMGSDHSGYVKRL 367 R+T GDD DR ++KS+G +TYFA D+AY K++ G D +I + G+DH Y+ R+ Sbjct: 291 WLRTTKYGDDKDRVVIKSNGDFTYFAPDIAYHDKKFKNSGKDPIIMNIWGADHLSYITRM 350 Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 + + ++ VL +LVRL +DG KMSKR G LR VD VG DS RF++L Sbjct: 351 KIAMQDLGYDPNKLIVLCLQLVRLMKDGQEYKMSKRKGTSFWLRDFVDLVGVDSARFILL 410 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487 R + LDFD +S +NPVF +QYA AR + +++K D+ Sbjct: 411 DRTYNSKLDFDINIATSKSNDNPVFLIQYANARSYQLLKKSK-------LDVSKLKATNI 463 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 ++E D +L+ L E+P VI ++ + L YL +A F+ +S+ + Sbjct: 464 DNELDK---KLVSTLLEFPEVIISSATKYLTHLLTQYLIRVAKEFNSWYSNTE-----KI 515 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + N M L + AV ++ +GL ++GV S ++M Sbjct: 516 IGSKNE---MNSLTIARAVNIVLENGLRLLGVSSKHKM 550 >gi|50365371|ref|YP_053796.1| arginyl-tRNA synthetase [Mesoplasma florum L1] gi|81391744|sp|Q6F0R1|SYR_MESFL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|50363927|gb|AAT75912.1| arginyl-tRNA synthetase [Mesoplasma florum L1] Length = 553 Score = 257 bits (656), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 182/587 (31%), Positives = 286/587 (48%), Gaps = 49/587 (8%) Query: 9 SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68 S +K LKEI K + K D IV E ++ H ST A++ ++ L +P+ +AE I Sbjct: 6 SIVKKDLKEIAQKFNISK---DPIV-EINKNNIDSHFSTTLALMSAKELKQNPIQLAENI 61 Query: 69 VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128 + D + IAG GFIN+ L L + +I YG+N I IE+V Sbjct: 62 KNELLQKDYYDQIEIAGPGFINIKLKTELLSTTIKNITTLKEAYGKNKIKNKIIN-IEYV 120 Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188 SANPTG +HVGH R AV G L ++ F GYEV E+Y NDAG QIN LA++VF Y A Sbjct: 121 SANPTGFLHVGHARNAVTGSVLEEVLKFDGYEVQTEFYTNDAGNQINILAVTVFVHYLWA 180 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP-------EEKWLPIVKDYSVQAM 241 L +++ P Y G + + + KY + N +E+ I + +VQ Sbjct: 181 L-GIETEKPANTYGGTFYDDLANIMIQKYGDKFKNLTFTETAISDEETHQIFRKEAVQHF 239 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 + I+ LK + D + SE + + D + I ++ + YE Sbjct: 240 LTEIKQQLKDFGVVIDHYSSEQEMY--DTNQIEKLLKEYKEKNATYEA------------ 285 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF-DNMIYVMGSDH 360 L ++T GDD DR L+K DGS TY DLA + +R D +I + G DH Sbjct: 286 ----DGALWLKTTEFGDDKDRVLVKKDGSLTYIVPDLATHNIRIQRTHADVLINIWGGDH 341 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY+ R+ A + + + + ++VRL +DG KMSKR G + L +++ VG D Sbjct: 342 HGYIPRMRAGLQLLGHNPDILEIEMVQMVRLIKDGKEYKMSKRKGTAVWLVDIMEMVGKD 401 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA--KDIFPDLDFD 478 ++R+M+ + +S +D D V++++ NPV+Y QYA ARC SI QA K+I +L+ Sbjct: 402 ALRYMLASKSSSSHMDLDLDLVQQKNATNPVYYAQYATARCHSILNQADQKNIKANLNVS 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 N E++L++ L + +VI+ + + P + Y+ + FH +++ Sbjct: 462 NLLSN---------KKEVELLLTLDNFNQVIQMSAKNRAPQLICEYIQTVCKQFHSYYA- 511 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + N+ + RL LV +V ++ + NIIGV + M Sbjct: 512 -----DTKILDENDVPTSEARLGLVLSVLQVLTNAFNIIGVSALETM 553 >gi|15828714|ref|NP_326074.1| arginyl-tRNA synthetase (arginine--tRNA ligase) (ArgRS) [Mycoplasma pulmonis UAB CTIP] gi|14089656|emb|CAC13416.1| ARGINYL-TRNA SYNTHETASE (ARGININE--TRNA LIGASE) (ARGRS) [Mycoplasma pulmonis] Length = 534 Score = 256 bits (654), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 160/492 (32%), Positives = 262/492 (53%), Gaps = 34/492 (6%) Query: 48 NAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVV 107 N MI+ + L T+ EL + + + ++ I GF+NL+L+ ++ I+ Sbjct: 38 NILMIVQKKNKLSLETLQELFEDKFE-NEYIEKFEILNPGFLNLFLNDLAFESLVLEILN 96 Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167 YGR L +NIEFVSANPTG +H+GH R A G LA+ + FSGY VT+EYYI Sbjct: 97 QNQNYGR-LEKNNQNINIEFVSANPTGFLHIGHVRNACYGQILANTLDFSGYNVTKEYYI 155 Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227 NDAG+QI TLA S+++R ++ L N + P+ Y G + + K+L +K++S++ E Sbjct: 156 NDAGSQIETLAYSIYFRARELL-NLEVKAPQEMYRGNDIVYGAKQLIEKFTSQIFEKDYE 214 Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP-SPIRDIIDNLARQGYV 286 + +K+ S + ++ I++ L + + DIF SE + + PI ++N Y Sbjct: 215 EIKEFLKEESTKIFLEKIKEHLNLIGVNFDIFFSEKSLYEENKIEPILKALEN-----YT 269 Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346 YE L +++ GDD DR L KSDGS TYF D+AY K++ Sbjct: 270 YE----------------KENALWLKTSHFGDDKDRVLRKSDGSLTYFTPDIAYHNIKHQ 313 Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406 R ++I V G+DHSGY+KRL +S++K ++ + +LV+L ++ +KMSKR G Sbjct: 314 RNNSSLINVWGADHSGYIKRLSIAYEMISKQKVKVETI--QLVKLTKNNQELKMSKRMGT 371 Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466 TL + + VG D++RF M R N+ L FD + + EN ++ ++Y YAR + Sbjct: 372 SFTLIELYEIVGKDAIRFYMNSRSNNSALVFDIDAILKNDSENYIYTIKYTYARAFQLLL 431 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 +A++ +L + ++EF + LI + E+P +I + + + + L YL Sbjct: 432 KAQEN----SINLSKKASQSYQNEFVKN---LIKKMVEFPSLIVQISQSFKTHLLNQYLI 484 Query: 527 DLASVFHGHWSH 538 DL + F+ +S+ Sbjct: 485 DLVTTFNSFYSN 496 >gi|32266208|ref|NP_860240.1| arginyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449] gi|81666101|sp|Q7VI99|SYR_HELHP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|32262258|gb|AAP77306.1| arginyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449] Length = 548 Score = 256 bits (653), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 162/523 (30%), Positives = 279/523 (53%), Gaps = 51/523 (9%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 IV+ERP++ GH +T A+ L++ +P IAE I + + + V GF+NL Sbjct: 21 IVLERPKNKDLGHFATPLALSLAKIEKTNPKLIAEEIAKILTNYAEFEKVETLN-GFVNL 79 Query: 92 YLSPSYLRKILS------------SIVVSGIEYG-RNLIGKGTKVNIEFVSANPTGPMHV 138 LS ++L+ I SI + +Y + I + IEFVSANPTGP+H+ Sbjct: 80 TLSTTFLQHIAQKQLQHCMTLEADSINPNISQYTQKTQITPKEHILIEFVSANPTGPLHI 139 Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198 GH R AV GD L + F GY++ EYYINDAGAQI L LS+F ++ + + P+ Sbjct: 140 GHARGAVYGDALTRVGRFLGYDILTEYYINDAGAQIYMLGLSIFLAGREHILKTQVEYPQ 199 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 YY G Y+ + K+ A + ++ F E + + D+ M++ I+D+L + I+ D Sbjct: 200 SYYKGEYIIDLAKQCALHFGEDV--FKSEDSISSLADFGKDMMLQEIKDNLAQVGIKFDS 257 Query: 259 FISEDDFHRGDPSPIRDIIDNL-ARQG-YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 F+SE + +D +D L + QG Y +G ++ S+ + Sbjct: 258 FVSEKSLY----DRWQDTLDTLKSHQGIYTKDG------------------KIWIASSQI 295 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 D+ DR +++ +G TY A D+ Y + K+ R F++ I + G+DH GY+ R++A + Sbjct: 296 NDEKDRVVVRENGEPTYLAGDIIYHQDKFHRHFEHYINIWGADHHGYIARVKAAIHFLGY 355 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 + ++ VLL ++V L + G P KMSKRAG+FI ++ V++++G+D++RF+ L +K L+ Sbjct: 356 DENKLEVLLSQMVSLLKGGQPYKMSKRAGNFILMKDVIEDIGADALRFIFLSKKPDTHLE 415 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD ++K++ NP++Y+ YA AR ++F +A ++ +N ++ D +E Sbjct: 416 FDVDELKKEDGSNPIYYINYANARIHTLFNKA-----GVNMQQTAQNA----NKLDINEQ 466 Query: 497 --QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 L+ ++IE++ +E K+ YL L++ FH ++ Sbjct: 467 AKALLFEALCLQQIIESSFRNREIQKICDYLKSLSASFHSFYN 509 >gi|86607336|ref|YP_476099.1| arginyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab] gi|109895045|sp|Q2JRC3|SYR_SYNJA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|86555878|gb|ABD00836.1| arginyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab] Length = 598 Score = 256 bits (653), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 172/577 (29%), Positives = 300/577 (51%), Gaps = 47/577 (8%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 I+ P D +G + + +++ + P IA+ + + + P + + +AG G++N Sbjct: 45 TIQIPSDPRYGDYACPTPLGMAKLCRMAPAQIAQTLQKHLDL-PGI-ATEVAGGGYLNFR 102 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L S+L + L ++ G ++G+ ++ +E+VSANPTGP+HVGH R A VG TLA+ Sbjct: 103 LGDSFLAERLQELLRLGEDFGKTAAPHPERILLEYVSANPTGPLHVGHGRWAAVGSTLAN 162 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 L+ ++G++V RE+YINDAG Q+ L S+ R +Q L + LPE Y G YL + + Sbjct: 163 LLRWTGHQVEREFYINDAGNQMRLLGQSLEVRVRQ-LQGEEVALPEDAYHGSYLVDIARR 221 Query: 213 LADKYSS---ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 L D+ + L PEE D++ M+ + L+ L + D + SE H D Sbjct: 222 LLDQVKAGIRPLPTTPEE-----YTDFAYAEMLAWQKQTLQQLRTEFDHWFSERRLHAPD 276 Query: 270 P----SPIRDIIDNLARQGYVYEGILP---PPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322 P S I+ + L +G++Y P PK + + F++ GDD DR Sbjct: 277 PQTGLSAIQQALQELQERGFLYRAKAPRGEDPKPGAEEA-------VYFKTQEFGDDKDR 329 Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 + K+DGS+TY AAD+AY + K RG+ +I ++GSDH GY+ RL A A S ++ Sbjct: 330 VVQKADGSFTYLAADIAYHRDKVRRGYQRLINILGSDHHGYIGRLHAAVGAFS-PDVKLE 388 Query: 383 VLLCELVRLYR------DGMPIKMSKRAGDFITLRHVVDE----VGSDSVRFMMLWRKNS 432 +L+ + V+L++ + ++MSKR G+F++L ++D+ VG D+ R+ +L Sbjct: 389 ILIGQFVKLFKTDPETGEKTEVRMSKRTGNFVSLNDLIDDPEIGVGVDAARWFLLSSSMD 448 Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492 ++FD +Q+ +NPV YV Y++ARC ++ R+ ++ + +L + + ++ + Sbjct: 449 SPINFDLDLAVKQTFDNPVVYVHYSHARCCTLLRRLQE---EEKVELTNKVTLTEQQKLP 505 Query: 493 TSE---LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549 E L++ L P + A + P+K+ Y +A+ F+ + + R P L+ Sbjct: 506 YQEPEERALLLRLLALPDELIAAAEERAPHKIIRYAEAIAADFNKFYDNCRILPLLK--- 562 Query: 550 ANNRKLTMMRLQLVHAVASII-NSGLNIIGVESPNEM 585 + L R+QLV A ++ N I+G+ +P M Sbjct: 563 -EDPLLAQARIQLVQATRQVLFNVLTGILGLSAPESM 598 >gi|291276464|ref|YP_003516236.1| arginyl-tRNA synthetase [Helicobacter mustelae 12198] gi|290963658|emb|CBG39490.1| arginyl-tRNA synthetase [Helicobacter mustelae 12198] Length = 537 Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 157/521 (30%), Positives = 271/521 (52%), Gaps = 49/521 (9%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK---------IDPDVD--- 79 I +E P++ GH +T A L++ P IAE + + + ++ D++ Sbjct: 18 ITLEMPKNKDFGHYATPIAFTLAKTYKKSPALIAEELAKKCEDIRIQDTEILERDIEVFE 77 Query: 80 SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139 V + G G+INL L ++L + + + + K ++ +E+VSANPTGP+H+G Sbjct: 78 KVEVIG-GYINLTLCHAFLESMANKTLKAPRREP-----KKKRILLEYVSANPTGPLHIG 131 Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199 H R A+ GD+LA + F GY++ EYYINDAGAQI L LS+ Q+ L + PE Sbjct: 132 HARGAIFGDSLAKIGKFLGYDIKTEYYINDAGAQIQMLGLSIMLAGQEHLLKQTVEYPEN 191 Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259 Y G Y+ + K +++ +++ + + +P + ++ M++ I+ +L+ + I D F Sbjct: 192 SYKGEYIIDLAKLAQERFGNDVFS---AQHIPELSNFGKDLMLEEIKSNLEEVGITFDFF 248 Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319 +SE + + S + + N A +YE ++ +S GD+ Sbjct: 249 VSEKELYEEWDSTLSLLQKNDA----IYE----------------KDQKFWLKSQQFGDE 288 Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 DR +++ DG TY A D+ Y K+ RG+D+ I + G+DH GY+ R+ A + Sbjct: 289 KDRVIIRDDGEPTYLAGDIIYHNDKFARGYDSYINIWGADHHGYINRVLASLEHLGFDSK 348 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439 ++ ++L ++V L +DG P KMSKRAG+FI ++ VV ++G D++RF L +K L+FD Sbjct: 349 KLKIILAQMVSLLKDGQPYKMSKRAGNFILMKDVVADIGVDALRFTFLSKKLDTALEFDI 408 Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 +K+Q NP+FY+ YA AR ++F + + + + L RN+ Q++ L+ Sbjct: 409 KDLKKQDSSNPIFYINYANARIHTLFEKCEKHYNFANISL--RNLENQDA------YDLL 460 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 + RV+ENA K+ YL +A FH +++ R Sbjct: 461 FQALQLQRVLENAFEEYALQKVCEYLRGIAVSFHTFYNNYR 501 >gi|57505428|ref|ZP_00371356.1| arginyl-tRNA synthetase [Campylobacter upsaliensis RM3195] gi|57016253|gb|EAL53039.1| arginyl-tRNA synthetase [Campylobacter upsaliensis RM3195] Length = 530 Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 171/560 (30%), Positives = 276/560 (49%), Gaps = 43/560 (7%) Query: 27 KILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85 KIL R ++E P+D A H +T A L++ P IA + + + + V A Sbjct: 11 KILGRDFILENPKDKALAHFATPLAFSLAKEFKKAPALIAADLALKFEDHFYFEKV-EAV 69 Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 G++N LS ++L + + E+G+ K +E+VSANPTGP+H+GH R A+ Sbjct: 70 NGYLNFRLSKAFLDFLAKKALKQPDEFGKGK-AKNESFLLEYVSANPTGPLHIGHARGAI 128 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205 GDTLA + GY+ EYY+NDAG QI+ L LSV + + N + + PE Y G Y Sbjct: 129 FGDTLARVARHLGYKFDTEYYVNDAGNQIDLLGLSVLSKVKILYLNEELEYPENAYKGEY 188 Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 + + E + + L ++ M+ +I+ +L NI D ++SE + Sbjct: 189 IDDLACEAFANFEKDFFTMDNVSNLAF---WAKDKMLDLIKQNLAQANIIIDHYVSERSY 245 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 + + + D I +L G VYE D K + S++ GD+ DR ++ Sbjct: 246 Y----NTLEDTIRSLKAHGGVYE---------------RDYK-IWLASSLKGDEKDRVIV 285 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 + DG TY AAD+ Y K K RG+D I + G+DH GY+ R++A + + ++L Sbjct: 286 RDDGRGTYLAADIVYHKDKMGRGYDKCINIWGADHHGYIPRMKAAIEFLGFNPQNLEIIL 345 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 ++V L +D P KMSKRAG+FI + ++DE+GSD++RF+ L +K L+FD +K++ Sbjct: 346 AQMVSLLKDNQPYKMSKRAGNFILMSEILDEIGSDALRFIFLSKKCDTHLEFDIDILKKE 405 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 NP+FY+ YA+AR + IF +A D+ V S + L+ Sbjct: 406 DNSNPIFYINYAHARVKQIFLKAGKSLDDV--------VEADLSNLNDEATNLLFEALNL 457 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 V+ +A + K+ YL LA+ FH + R V + ++ L+L Sbjct: 458 GSVLNDAFEQRALQKIPDYLKGLATSFHKFYYENR-------VIGTENEDSL--LKLFAL 508 Query: 566 VASIINSGLNIIGVESPNEM 585 VA I G ++G+ ++M Sbjct: 509 VALSIKIGFALMGIRVKDKM 528 >gi|145220535|ref|YP_001131244.1| arginyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265] gi|189083541|sp|A4SGY3|SYR_PROVI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|145206699|gb|ABP37742.1| arginyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265] Length = 552 Score = 253 bits (647), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 173/571 (30%), Positives = 291/571 (50%), Gaps = 59/571 (10%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFIN 90 + IE+P GH STN A + ++ LG +P T+A+ ++ ++ ++ +AG GFIN Sbjct: 24 VQIEKPASAKFGHFSTNIAFLSAKELGKNPRTLAQELIGHLRFPSGSIEKTEVAGPGFIN 83 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +L+P ++ L ++ G +GR G G K +E+VSANPTGP+ +G R V+GD + Sbjct: 84 FFLTPPFIMDSLGEVLRQGEAFGRGTSGNGEKAIVEYVSANPTGPLTIGRGRGGVLGDCI 143 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+L GY VTREYY NDAG Q+ L SV +RY + D P+ +Y G Y+ Sbjct: 144 ANLFEAEGYSVTREYYFNDAGRQMQILGESVRFRYLERC-GRKVDFPDTHYQGGYI---- 198 Query: 211 KELADK-YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 ++AD+ Y + + + + K + + I+ L+ L I+HD F +E + D Sbjct: 199 GDIADRIYQEQGDSLADAEGTGEFKSTAEAIIFSSIKKTLERLGIRHDSFFNEHTLYTPD 258 Query: 270 PS-PIRD--IIDNLARQGYV--YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 + R+ +ID L ++G++ YEG F +T +G + ++ L Sbjct: 259 ENGATRNSRVIDALRQKGFIDEYEG------------------ATWFLTTKLGQEKNKVL 300 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINV 383 +KS G +Y D+AY KY+RGF ++ V G+DH Y +EA+ + ++I + Sbjct: 301 VKSTGEPSYRLPDIAYHLTKYDRGFGVIVNVFGADHIDEYPDVIEAL-KILGHDTSRIRI 359 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443 + + V DG +KMS R G+ L ++D+VG+D+ R + R L+FD + Sbjct: 360 AINQFVTTTVDGETVKMSTRKGNADLLDDLIDDVGADATRLFFIMRSKDSHLNFDVDLAR 419 Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI---- 499 +QSK+NPVFY+QYA+AR S+ R A + N E D + L+ + Sbjct: 420 KQSKDNPVFYLQYAHARICSLLRMA-----------WSENGFNPEKLPDLALLKTLSSPE 468 Query: 500 -----VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554 + L ++P ++ +A EP K+ Y++ +A ++H + +E P L+ +A+ Sbjct: 469 ELQLALALLDFPDMVRSALRLLEPQKMVDYMHSIAELYHRFY---QECPILK-AEADTAN 524 Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L A ++ +G I+G+ +P M Sbjct: 525 ---ARLLLSLATRQVLQNGFRILGISAPESM 552 >gi|167844056|ref|ZP_02469564.1| arginyl-tRNA synthetase [Burkholderia pseudomallei B7210] Length = 481 Score = 253 bits (645), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 166/510 (32%), Positives = 258/510 (50%), Gaps = 58/510 (11%) Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164 ++ G +G + G +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE Sbjct: 1 MLAQGRAFGASERDHGKRVLLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHRE 60 Query: 165 YYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYS 218 +Y NDAG QI LA+S R + L D+ PE Y G Y+ + G+ +A Sbjct: 61 FYYNDAGVQIGNLAISTQAR-ARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDG 119 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 + + + L ++ ++V + + DLKA ++ D + E + + +D Sbjct: 120 EPVTGKRDVEDLEAIRKFAVTYLRREQDMDLKAFGVKFDQYYLESSLY--TEGRVEKTVD 177 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 L G YE L R+T GDD DR + K+DG+YTYF D+ Sbjct: 178 ALIAAGMTYE----------------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDV 221 Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGM 396 AY K+ERGF +I + GSDH G + R+ A + K + +L ++V + RDG Sbjct: 222 AYHVTKWERGFTKVINIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQ 281 Query: 397 PIKMSKRAGDFITLRHVV-----------------DEV----GSDSVRFMMLWRKNSELL 435 +K+SKRAG ++T+R ++ DE G D+VRF ++ RK Sbjct: 282 EVKISKRAGSYVTVRDLIEWSGGATPGSEGSPELLDEATITRGRDAVRFFLISRKADTEF 341 Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495 FD +Q+ ENPV+YVQYA+AR S+ + K + D L ++ P +S+ Sbjct: 342 VFDIDLALKQNDENPVYYVQYAHARICSVINEWKSRYGATDALLPGADLSPLDSK---QA 398 Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555 + L+ LAEYP V+ +A P+ +AFYL +LAS FH ++ R V + + Sbjct: 399 MALMQKLAEYPDVLAHAAGELAPHAVAFYLRELASEFHSFYNAER-------VLVDEQAP 451 Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R+ L+ A ++ +GL ++GV +P++M Sbjct: 452 RTARVALLAATRQVLENGLAMLGVSAPSKM 481 >gi|222143238|pdb|3FNR|A Chain A, Crystal Structure Of Putative Arginyl T-Rna Synthetase From Campylobacter Jejuni Length = 464 Score = 253 bits (645), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 148/462 (32%), Positives = 246/462 (53%), Gaps = 42/462 (9%) Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +E+VSANPTGP+H+GH R AV GDTL L GY+ EYY+NDAG QI L LS+ Sbjct: 34 LEYVSANPTGPLHIGHARGAVFGDTLTRLARHLGYKFNTEYYVNDAGNQIYLLGLSILLS 93 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 ++++ + + + PE YY G Y+ + KE +K+ E F EE +P + D++ M+ + Sbjct: 94 VKESILHENVEYPEQYYKGEYIVDLAKEAFEKFGKEF--FSEEN-IPSLADWAKDKMLVL 150 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 I+ +L+ I+ D ++SE ++ + +++L +YE Sbjct: 151 IKQNLEQAKIKIDSYVSERSYY----DALNATLESLKEHKGIYE---------------- 190 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 ++ S+ GD+ DR +++ DG TY AAD+ Y K K RG+ I + G+DH GY+ Sbjct: 191 QEGKIWLASSQKGDEKDRVIIREDGRGTYLAADIVYHKDKMSRGYGKCINIWGADHHGYI 250 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 R++A + + ++L ++V L +DG P KMSKRAG+FI + VVDE+GSD++R+ Sbjct: 251 PRMKAAMEFLGFDSNNLEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIGSDALRY 310 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRN 483 + L +K L+FD ++++ NPV+Y+ YA+AR +F +A D + DL Sbjct: 311 IFLSKKCDTHLEFDISDLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADL---- 366 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + + L+ V+ +A A+ K+ YL +LA+ FH ++ EN Sbjct: 367 -----QSLNQDGVNLLFEALNLKAVLNDAFEARALQKIPDYLKNLAANFHKFYN---ENK 418 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + N+ L+L VA I + +++G+E+ N+M Sbjct: 419 VVGSANEND------LLKLFSLVALSIKTAFSLMGIEAKNKM 454 >gi|154148135|ref|YP_001406805.1| arginyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381] gi|153804144|gb|ABS51151.1| arginyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381] Length = 525 Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 163/562 (29%), Positives = 288/562 (51%), Gaps = 48/562 (8%) Query: 26 KKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84 KKIL I++E+P++ H + A L++ P IAE + + + + + +V A Sbjct: 10 KKILPYDIILEQPKNKNLAHYACPVAFCLAKEFKKSPKIIAEELADKFR-NSKIFNVS-A 67 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 G++N L +L +I + +G + +E++SANPTGP+H+GH R A Sbjct: 68 LNGYLNFKLKAEFLAEISGEALKNGENFASEKEKTSPTTLLEYISANPTGPLHIGHVRGA 127 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204 V GDTL + + GY++ EYYINDAG QI+ L +S+ R ++ L + P+ YY G Sbjct: 128 VYGDTLQRVSNYLGYKMQTEYYINDAGNQIDLLGISMILRAKE-LAGEEVIYPDKYYRGE 186 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 Y+ + K +K+ E+L +EK L D++ ++KII+ DL I+ +ISE Sbjct: 187 YIDEILKIAKEKFGDEIL--KDEKKLS---DFAKDEVLKIIKKDLADAGIEISNWISEKS 241 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 + + + I L + G +YE ++ S GD+ DR + Sbjct: 242 LY----NELEGTIKKLEKSGKMYE----------------KEGKIWIASIQNGDEKDRVV 281 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 ++ DG TY A D+ Y K+ER FD+ I + G+DH GYV RL+A + + ++ V+ Sbjct: 282 VREDGRPTYLAGDIIYHNNKFERNFDHYINIWGADHHGYVARLKAAINFLGYDENRLEVV 341 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L ++V L ++G KMSKRAG+ + + +++E+G D++RF+ + + + L+FD ++K+ Sbjct: 342 LMQMVSLLKNGETFKMSKRAGNVVLMSDILEEIGKDALRFIFISKSGNSPLEFDIDELKK 401 Query: 445 QSKENPVFYVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503 + NP+FY+ YA+AR +F +A K++ +D + D L L+ Sbjct: 402 EDSTNPIFYINYAHARVNQVFGKAGKNVEQIIDENF---------ENLDEDALNLVFEAL 452 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 ++ A ++ K+ +L LA FH +++ R + ++N RL++ Sbjct: 453 RLNEILNEALKSRSLQKIPDFLKSLAGDFHKYYNEN------RVIGSDNEN---ARLKVF 503 Query: 564 HAVASIINSGLNIIGVESPNEM 585 VA I + +++G+E+ +M Sbjct: 504 AVVALCIRTAFSLMGLEAKAKM 525 >gi|167892559|ref|ZP_02479961.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 7894] Length = 481 Score = 249 bits (636), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 165/510 (32%), Positives = 257/510 (50%), Gaps = 58/510 (11%) Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164 ++ G +G + +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE Sbjct: 1 MLAQGRAFGASERDHDKRVLLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHRE 60 Query: 165 YYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV------GKELADKYS 218 +Y NDAG QI LA+S R + L D+ PE Y G Y+ + G+ +A Sbjct: 61 FYYNDAGVQIGNLAISTQAR-ARGLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDG 119 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 + + + L ++ ++V + + DLKA ++ D + E + + +D Sbjct: 120 EPVTGKRDVEDLEAIRKFAVTYLRREQDMDLKAFGVKFDQYYLESSLY--TEGRVEKTVD 177 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 L G YE L R+T GDD DR + K+DG+YTYF D+ Sbjct: 178 ALIAAGMTYE----------------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDV 221 Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGM 396 AY K+ERGF +I + GSDH G + R+ A + K + +L ++V + RDG Sbjct: 222 AYHVTKWERGFTKVINIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQ 281 Query: 397 PIKMSKRAGDFITLRHVV-----------------DEV----GSDSVRFMMLWRKNSELL 435 +K+SKRAG ++T+R ++ DE G D+VRF ++ RK Sbjct: 282 EVKISKRAGSYVTVRDLIEWSGGATPGSEGSPELLDEATITRGRDAVRFFLISRKADTEF 341 Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495 FD +Q+ ENPV+YVQYA+AR S+ + K + D L ++ P +S+ Sbjct: 342 VFDIDLALKQNDENPVYYVQYAHARICSVINEWKSRYGATDALLPGADLSPLDSK---QA 398 Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555 + L+ LAEYP V+ +A P+ +AFYL +LAS FH ++ R V + + Sbjct: 399 MALMQKLAEYPDVLAHAAGELAPHAVAFYLRELASEFHSFYNAER-------VLVDEQAP 451 Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R+ L+ A ++ +GL ++GV +P++M Sbjct: 452 RTARVALLAATRQVLENGLAMLGVSAPSKM 481 >gi|223038788|ref|ZP_03609080.1| arginyl-tRNA synthetase [Campylobacter rectus RM3267] gi|222879761|gb|EEF14850.1| arginyl-tRNA synthetase [Campylobacter rectus RM3267] Length = 528 Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 161/553 (29%), Positives = 282/553 (50%), Gaps = 42/553 (7%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +E+P+D H + L++ L P+ IA + ++ + ++ A G+IN Sbjct: 18 ALEKPKDKGLAHYAM-PTFSLAKQLKKSPVAIAAELASKFENSEVFEAA--ALNGYINFK 74 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L P++L K S+ + + E+ + G K+ +E+VSANPTGP+H+GH R AV GDTLA Sbjct: 75 LKPAFLDKFASASLANPSEFAKGGGTSGEKILLEYVSANPTGPLHIGHVRGAVFGDTLAR 134 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 + G + EYYINDAG QI L S+ ++ L+ PE +Y G Y++ + KE Sbjct: 135 VGLHIGENIATEYYINDAGNQIELLGTSISLWARENLFGESVAYPEKFYRGDYIEPIAKE 194 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 +K+ E+ + E + L + ++ ++ +I+ +L I + + SE ++ Sbjct: 195 ALEKFGKEIF-YDESRNLELA-EFGKDRVLVLIKQNLADAQIFIENWASEKSYY----DK 248 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + +D L + +YE ++ +S+ VGD+ DR +++ DG T Sbjct: 249 LSLTLDRLKNENGIYE----------------SEGKIWLKSSEVGDEKDRVIVREDGRGT 292 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 Y A D+ Y K+ RGFD I + G+DH GY+ R++A + + ++ ++L ++V L Sbjct: 293 YLAGDVVYHDDKFRRGFDRCINIWGADHHGYIARMKAALHLLGYDENRLEIILSQMVSLL 352 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 +DG KMSKRAG+ + + VV+E+G +++RFM L ++ L+FD ++K + NP+F Sbjct: 353 KDGEAYKMSKRAGNVVLMSDVVEEIGCEALRFMFLSKRCDTHLEFDVDELKREDSSNPIF 412 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 Y+ YA+AR IF +A D+ F + +E + L+ ++ ++ Sbjct: 413 YINYAHARINQIFAKAGKNVADIVGVKFAN--LSEEGK------NLLFEALTLNDILVDS 464 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572 + K+ YL LA+ FH ++ EN R V + N L+L VA I + Sbjct: 465 FNTRSMNKICDYLKSLAANFHKFYN---EN---RVVGSENEDEL---LKLFAVVALSIKT 515 Query: 573 GLNIIGVESPNEM 585 L ++GV + ++M Sbjct: 516 ALGLMGVAAKDKM 528 >gi|269114834|ref|YP_003302597.1| Arginyl-tRNA synthetase [Mycoplasma hominis] gi|268322459|emb|CAX37194.1| Arginyl-tRNA synthetase [Mycoplasma hominis ATCC 23114] Length = 543 Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 173/570 (30%), Positives = 291/570 (51%), Gaps = 57/570 (10%) Query: 29 LDRIVIERP----RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP--DVDSVF 82 L+++ I +P +G S+N A+ L + LG + IA+ IV I ++ ++ + Sbjct: 18 LEKLNISKPIVLTESKNYGDYSSNIALTLQKDLGKKAIDIAQEIVRNIDLNKFKEISEIK 77 Query: 83 IAGKGFINLYLSPSYLRKILSSIVVSGIEYGR-NLIGKGTKVNIEFVSANPTGPMHVGHC 141 +A GFIN ++S S + ++ I G YG + GKG +N+EFVSANPTG +H+GH Sbjct: 78 VAEPGFINFWVSNSVIANTINQINNEGSTYGSIDPKGKGA-INVEFVSANPTGYLHIGHA 136 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYY 201 R A +G TL +++ +G+ V REY +ND G Q+N +A S+F RYQQ ++N + +PE Y Sbjct: 137 RNAAIGATLCNILEKAGHRVVREYLVNDYGNQMNKMADSIFARYQQ-IFNPEFPMPEDSY 195 Query: 202 PGVYLKHVGKELADKYSSELLNFP-EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 G + + + + E N ++ I + + +K I +D+K + DIF Sbjct: 196 HGGDMIEFAQAFYNIHKDEYKNVEYTDEIRKIFRSFGRDFALKNIIEDMKKFGVTFDIFT 255 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP-PKSKTTQKCDMDRKQLLFRSTMVG-D 318 SE A Q Y + P + KTT K D +T G D Sbjct: 256 SE------------------AEQ-YAKNRVWPAIHRLKTTYKKD---GATWLETTKGGKD 293 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFD---NMIYVMGSDHSGYVKRLEAVAAAVS 375 D DR ++KS+G TYF AD+AY + K D ++ + G+DHSGYV+R++ + Sbjct: 294 DKDRVIIKSNGDSTYFCADIAYHEQKLLELNDPNGKIVDIWGADHSGYVERVKFSFEDLG 353 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435 ++ QI +LL +L+R+ ++G +KMSKR G +TLR + +EVG+D++R+ ++ R + + Sbjct: 354 HRRDQIEILLFQLIRIMKNGKEVKMSKRLGTSLTLRELAEEVGNDAIRYFLIDRSYNSRI 413 Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495 DFD KV + ++ NP++ ++YA+AR + + + N I + + Sbjct: 414 DFDINKVTDNNENNPMYIIKYAHARACQLLDK-----------VGIENPIASDELDNEYA 462 Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555 +L+ L EYP +I + L YL L+ F+ +S+ + N + L Sbjct: 463 QKLVAELKEYPELISTMAKTYKVNLLPPYLLKLSKAFNSFYSNTK-----VLGSPNEQSL 517 Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LV A ++ GL ++ +E+P +M Sbjct: 518 AA----LVKATKIVLADGLKLMDIEAPEKM 543 >gi|332295566|ref|YP_004437489.1| Arginyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796] gi|332178669|gb|AEE14358.1| Arginyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796] Length = 541 Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 174/552 (31%), Positives = 282/552 (51%), Gaps = 46/552 (8%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I I P+ +G + ++M L++ L DP+ IA + K D D SV +A GFIN+ Sbjct: 31 IQISNPQ---YGDYTILSSMKLAKHLKEDPIKIANKLAQSFK-DDDF-SVQVANPGFINI 85 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L L+ IL + + N + IE+VSANPTGP+H+GH R A GD+L Sbjct: 86 SLKEHALQNILQNFTIEPYLNSSN----SKTILIEYVSANPTGPLHIGHARWAAFGDSLT 141 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ G+ V E+Y+N+ G Q+ LS+ R ++ L D D PEG Y G Y+ + K Sbjct: 142 RILKDYGFNVQTEFYVNNYGNQMELFTLSIIARMREIL-KQDYDFPEGGYQGEYVVDIAK 200 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 ++ +KY L + ++K+ ++ + ++ LK + D F E H+ + Sbjct: 201 KILNKYPF-LSKDDQNLHFELIKEEALNIALGEQKETLKNFGVIFDSFFFESSLHQ--EN 257 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 I II+ L + Y K D L +++ D DR L++ +G Sbjct: 258 KINKIIELLISKNQTY-------------KKD---GALWLKTSNYFDSEDRVLIRENGLP 301 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 TYFAAD+AY K++R FD I + G+DH GY+ RL++ A+ + ++ VLL +LV L Sbjct: 302 TYFAADIAYHYEKFKRNFDIYINIWGTDHHGYIPRLKSALKALDLPEEKLVVLLGQLVNL 361 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 Y++ I+MSKR G+ ITL+ ++++VG D +RF + R + +DF K KE + +NP+ Sbjct: 362 YKNKNLIRMSKRTGNMITLKELLEDVGHDILRFYLTSRSLNSTIDFHIEKAKEVTMDNPL 421 Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511 +Y+QYA AR SI R + P + + + + + E E ++I + + E Sbjct: 422 YYIQYACARISSIRRNIDEEIP-ANLNEYSKYIKTAE------EYEIIKKIDNFDFFREK 474 Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571 A EPY L Y+ DLA +FH ++ R + ++ + RL L+ V +I++ Sbjct: 475 AVRDYEPYYLVNYMLDLARLFHIYYQKNR-------IINQDKSIQWSRLFLILKVHNILS 527 Query: 572 SG---LNIIGVE 580 G LNII +E Sbjct: 528 RGLSYLNIIPME 539 >gi|237750164|ref|ZP_04580644.1| arginyl-tRNA synthetase [Helicobacter bilis ATCC 43879] gi|229374351|gb|EEO24742.1| arginyl-tRNA synthetase [Helicobacter bilis ATCC 43879] Length = 556 Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 164/575 (28%), Positives = 294/575 (51%), Gaps = 48/575 (8%) Query: 25 EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE-LIVARIKIDPDVDSV-- 81 ++KI I +E P+D HGH +T L++ L +P +A+ L ++ D D +S Sbjct: 16 QEKINLIIALEHPKDKRHGHFATPLCFTLTKILRTNPKVLAQSLQDFFMQYDLDSNSTKP 75 Query: 82 -------FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG 134 A G++NL L+ S+L +L + S ++ + K TK+ +E+VSANPTG Sbjct: 76 FKKMFSSIEALNGYLNLTLTHSFLTYMLEVALQSPKDFAKGEC-KNTKILLEYVSANPTG 134 Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS 194 P+H+GH R A+ G L + GY++ EYY+NDAG+QI+ LALSV+ + L N Sbjct: 135 PLHIGHARGAIFGSVLQRIGKRLGYDIKGEYYVNDAGSQIDMLALSVYNSAAKIL--NLE 192 Query: 195 DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD---YSVQAMMKIIRDDLKA 251 L Y G Y+ V ++ + + + I++ Y+ M+++I+++L + Sbjct: 193 SLSGEVYKGEYIDSVAQDAIKHFGESFFRTADSQKTDILQKIGLYAKDMMLEVIKENLAS 252 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 L+I D F+SE + + D+ + + +L + + Sbjct: 253 LSIDFDYFVSEKELYTR--------FDDTMKTLETHNALLHQDGA------------IWL 292 Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371 +ST+ GD+ DR L++ +G TY A D+ Y K K++R +++ I + G+DH GY+ R++A Sbjct: 293 QSTLKGDEKDRVLVRDNGMPTYMAGDIIYHKDKFDRDYNHYINIWGADHHGYIARIKASI 352 Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431 + + VLL ++V L +DG P KMSKRAG+FI ++ VV+++G+DS++F+ L + Sbjct: 353 DFLGFDSKNLEVLLAQMVSLLKDGQPYKMSKRAGNFILIQDVVNDIGADSLKFVFLSKSL 412 Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVIPQESE 490 L+FD + ++ NPVFY+ YA AR ++ ++ D++ DL ++ Sbjct: 413 DTHLEFDVQDLSKEDSSNPVFYINYANARIHTLLEKSSLSLEDINKTDL--STLLDSNDS 470 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550 +QLI+ V+ + + KL YL +LA FH ++ R + Sbjct: 471 LGQDSMQLILQSLGLFYVLNQSYEERALQKLCEYLKNLAKSFHTFYNAHR-------ILQ 523 Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++++ L+ V+ + +G N++G+ +M Sbjct: 524 TEHEAGILKIFLL--VSLSLTTGFNMLGINIKTKM 556 >gi|255323529|ref|ZP_05364660.1| arginyl-tRNA synthetase [Campylobacter showae RM3277] gi|255299566|gb|EET78852.1| arginyl-tRNA synthetase [Campylobacter showae RM3277] Length = 528 Score = 247 bits (630), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 160/553 (28%), Positives = 285/553 (51%), Gaps = 42/553 (7%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +E+P+D H + A L++ L P+ IA + ++ + ++ A G+IN Sbjct: 18 ALEKPKDKGLAHYAM-PAFSLAKQLKKSPVAIAAELASKFENSEVFEAT--ALNGYINFK 74 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L P++L K S+ + + E+ + G K+ +E+VSANPTGP+H+GH R AV GDTLA Sbjct: 75 LKPAFLDKFASASLANPSEFAKGGATSGEKILLEYVSANPTGPLHIGHVRGAVFGDTLAR 134 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 + G + EYYINDAG QI L S+ ++ L+ PE +Y G Y++ + KE Sbjct: 135 VGLHIGENIATEYYINDAGNQIELLGTSISLWARENLFGQSVAYPEKFYRGDYIEPIAKE 194 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 +K+ E+ + E + L + ++ ++ +I+ +L I + + SE ++ D P Sbjct: 195 ALEKFGKEIF-YDESRNLELA-EFGKDRVLVLIKQNLADAQIFIENWASEKSYY--DKLP 250 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + ++ L + +YE ++ +S+ VGD+ DR +++ DG T Sbjct: 251 L--TLERLKSENGIYE----------------SEGKIWLKSSEVGDEKDRVIVREDGRGT 292 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 Y A D+ Y K+ RGFD I + G+DH GY+ R++A + + ++ ++L ++V L Sbjct: 293 YLAGDVVYHDDKFRRGFDRCINIWGADHHGYIARMKAALHLLGYDENRLEIILSQMVSLL 352 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 +DG KMSKRAG+ + + VV+E+G +++RF+ L ++ L+FD ++K + NP+F Sbjct: 353 KDGEAYKMSKRAGNVVLMSDVVEEIGYEALRFIFLSKRCDTHLEFDVDELKREDSSNPIF 412 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 Y+ YA+AR IF +A D+ F + ++ + L+ ++ ++ Sbjct: 413 YINYAHARINQIFAKAGKSVVDVAGVKFEN--LSEDGK------NLLFEALTLNDILVDS 464 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572 + K+ YL LA+ FH ++ EN R V + N L+L VA I + Sbjct: 465 FNTRAVNKICDYLKSLAANFHKFYN---EN---RVVGSENEDEL---LKLFAVVALSIKT 515 Query: 573 GLNIIGVESPNEM 585 L ++G+ + ++M Sbjct: 516 ALGLMGIAAKDKM 528 >gi|294827929|ref|NP_711869.2| arginyl-tRNA synthetase [Leptospira interrogans serovar Lai str. 56601] gi|302393769|sp|Q8F5J3|SYR_LEPIN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|293385774|gb|AAN48887.2| arginyl-tRNA synthetase [Leptospira interrogans serovar Lai str. 56601] Length = 586 Score = 246 bits (627), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 179/590 (30%), Positives = 294/590 (49%), Gaps = 62/590 (10%) Query: 23 KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSV 81 +VEK+ +I IE RD G ST+ A+ S+ L +P+ +++ +V ++ D+ + V Sbjct: 28 EVEKETF-KIKIEYSRDEKFGDYSTSFALENSKLLKRNPIQVSKELVEILQKRTDLFEKV 86 Query: 82 FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 GF+N +S S+L + + V+SG + + + K+N+EFVSANPTGP+++ Sbjct: 87 DFTPPGFVNFRISTSFLLNYIETSVLSGNYFPK--VDLPLKINLEFVSANPTGPLNIVSA 144 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY-----QQALYNNDSD- 195 R A GDT+ASL+ G+ V +E+YIND G Q+ L +S R ++ +D Sbjct: 145 RAAANGDTMASLLKAIGHNVDKEFYINDYGNQVFLLGVSTLVRIRELKGEEGTQQETTDD 204 Query: 196 -----------LPEGYYPGVYLKHVGKELAD--KYSSELLNFPEEKWLPIVKD----YSV 238 LP Y G Y+K + L K + + N ++K + + +++ Sbjct: 205 TPIEIILEKNILPAEGYRGEYIKDIASSLLKDPKKNVTIENLLKQKKYKELAELCAVWTI 264 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + R DL A ++ D + SE H D + ++ +L + G +++ Sbjct: 265 ENNLIWQRKDLDAFGVEFDRYFSERTLHEADK--VLSVMKDLEKSGKIFQ---------- 312 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + + +FRST GDD DR +++ DG TY AD+AY K K ERG+D + + G Sbjct: 313 ------EDGKKVFRSTEYGDDKDRVVVRDDGRPTYLLADIAYHKDKIERGYDKIYDIWGP 366 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV---D 415 DH GY+ RL ++ KK V++ + V L G +KMSKRAG F T+ ++ Sbjct: 367 DHHGYISRLSGAVQSLGYKKENFKVIISQQVNLLESGQKVKMSKRAGSFQTMSDLIGFLG 426 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 + G D R+ + R LDFD K++S +NPVFY+QYA+AR SIF++ D Sbjct: 427 KHGKDVGRYFFVMRSLDAPLDFDLDLAKDESDKNPVFYLQYAHARICSIFKEVGDQTSK- 485 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 I + SE +L+ +A +P I ++ A EP+++ YL A F Sbjct: 486 -----EATAILEMSE---ERKRLLFWIARFPEEIFDSANAMEPHRVTNYLQSFAKAFTSF 537 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++N RL+ R L + R+ L A +++ GL +IGV +P M Sbjct: 538 Y-LAKDN-RLKDASKEVR-LGLARICL--AAKNVLAEGLKLIGVSAPERM 582 >gi|302393768|sp|Q72QL1|SYR_LEPIC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS Length = 586 Score = 246 bits (627), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 177/590 (30%), Positives = 292/590 (49%), Gaps = 62/590 (10%) Query: 23 KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSV 81 +VEK+ +I IE RD G ST+ A+ S+ L +P+ +++ +V ++ D+ + V Sbjct: 28 EVEKEAF-KIKIEYSRDEKFGDYSTSFALENSKLLKRNPIQVSKELVEILQKRTDLFEKV 86 Query: 82 FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 GF+N +S S+L + + V+SG + + + K+N+EFVSANPTGP+++ Sbjct: 87 DFTPPGFVNFRISTSFLLNYIETSVLSGNYFPK--VDLPLKINLEFVSANPTGPLNIVSA 144 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY-----QQALYNNDSD- 195 R A GDT+ASL+ G+ V +E+YIND G Q+ L +S R ++ +D Sbjct: 145 RAAANGDTMASLLKAIGHNVDKEFYINDYGNQVFLLGVSTLVRIRELKGEEGTQQETTDD 204 Query: 196 -----------LPEGYYPGVYLKHVGKELAD--KYSSELLNFPEEKWLPIVKD----YSV 238 LP Y G Y+K + L K + + N ++K + + +++ Sbjct: 205 TPIEIILEKNILPAEGYRGEYIKDIASSLLKDPKKNVTIENLLKQKKYKELAELCAVWTI 264 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + R DL A ++ D + SE H D + ++ +L + G +++ Sbjct: 265 ENNLIWQRKDLDAFGVEFDCYFSERTLHEADK--VLSVMKDLEKSGKIFQ---------- 312 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + + +FRST GDD DR +++ DG TY AD+AY K K ERG+D + + G Sbjct: 313 ------EDGKKVFRSTEYGDDKDRVVVRDDGRPTYLLADIAYHKDKIERGYDKIYDIWGP 366 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV---D 415 DH GY+ RL ++ KK V++ + V L G +KMSKRAG F T+ ++ Sbjct: 367 DHHGYISRLSGAVQSLGYKKENFKVIISQQVNLLESGQKVKMSKRAGSFQTMSDLIGFLG 426 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 + G D R+ + R LDFD K++S +NPVFY+QYA+AR SIF++ D Sbjct: 427 KHGKDVGRYFFVMRSLDAPLDFDLDLAKDESDKNPVFYLQYAHARICSIFKEVGDQTSKE 486 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + E +L+ +A +P I ++ A EP+++ YL A F Sbjct: 487 AAAIL---------EMSEERKRLLFWIARFPEEIFDSANAMEPHRVTNYLQSFAKAFTSF 537 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++N RL+ R L + R+ L A +++ GL +IGV +P M Sbjct: 538 Y-LAKDN-RLKDASKEVR-LGLARICL--AAKNVLAEGLKLIGVSAPERM 582 >gi|45657950|ref|YP_002036.1| arginyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45601191|gb|AAS70673.1| arginyl-tRNA synthetase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 596 Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 177/590 (30%), Positives = 292/590 (49%), Gaps = 62/590 (10%) Query: 23 KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSV 81 +VEK+ +I IE RD G ST+ A+ S+ L +P+ +++ +V ++ D+ + V Sbjct: 38 EVEKEAF-KIKIEYSRDEKFGDYSTSFALENSKLLKRNPIQVSKELVEILQKRTDLFEKV 96 Query: 82 FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 GF+N +S S+L + + V+SG + + + K+N+EFVSANPTGP+++ Sbjct: 97 DFTPPGFVNFRISTSFLLNYIETSVLSGNYFPK--VDLPLKINLEFVSANPTGPLNIVSA 154 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY-----QQALYNNDSD- 195 R A GDT+ASL+ G+ V +E+YIND G Q+ L +S R ++ +D Sbjct: 155 RAAANGDTMASLLKAIGHNVDKEFYINDYGNQVFLLGVSTLVRIRELKGEEGTQQETTDD 214 Query: 196 -----------LPEGYYPGVYLKHVGKELAD--KYSSELLNFPEEKWLPIVKD----YSV 238 LP Y G Y+K + L K + + N ++K + + +++ Sbjct: 215 TPIEIILEKNILPAEGYRGEYIKDIASSLLKDPKKNVTIENLLKQKKYKELAELCAVWTI 274 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + R DL A ++ D + SE H D + ++ +L + G +++ Sbjct: 275 ENNLIWQRKDLDAFGVEFDCYFSERTLHEADK--VLSVMKDLEKSGKIFQ---------- 322 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + + +FRST GDD DR +++ DG TY AD+AY K K ERG+D + + G Sbjct: 323 ------EDGKKVFRSTEYGDDKDRVVVRDDGRPTYLLADIAYHKDKIERGYDKIYDIWGP 376 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV---D 415 DH GY+ RL ++ KK V++ + V L G +KMSKRAG F T+ ++ Sbjct: 377 DHHGYISRLSGAVQSLGYKKENFKVIISQQVNLLESGQKVKMSKRAGSFQTMSDLIGFLG 436 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 + G D R+ + R LDFD K++S +NPVFY+QYA+AR SIF++ D Sbjct: 437 KHGKDVGRYFFVMRSLDAPLDFDLDLAKDESDKNPVFYLQYAHARICSIFKEVGDQTSKE 496 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + E +L+ +A +P I ++ A EP+++ YL A F Sbjct: 497 AAAIL---------EMSEERKRLLFWIARFPEEIFDSANAMEPHRVTNYLQSFAKAFTSF 547 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++N RL+ R L + R+ L A +++ GL +IGV +P M Sbjct: 548 Y-LAKDN-RLKDASKEVR-LGLARICL--AAKNVLAEGLKLIGVSAPERM 592 >gi|330723522|gb|AEC45892.1| arginyl-tRNA synthetase [Mycoplasma hyorhinis MCLD] Length = 533 Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 193/588 (32%), Positives = 301/588 (51%), Gaps = 75/588 (12%) Query: 17 EIDCKIK-VEKKILDRI-----VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 +ID +IK V +KI++ V+ P +H STN AM+++ LD + A +V Sbjct: 2 QIDEQIKQVLQKIINNFGYEANVVLTPSK-SHADYSTNLAMVVASKYKLDVIDFATKVVE 60 Query: 71 RIKIDPDVDSVF-----IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV-N 124 +I D D +F + GFIN ++S + I+++I++ G + NL K KV N Sbjct: 61 QI----DKDKLFLTKIEVVKPGFINFFVSNTSYANIVNNIILEGENFA-NL--KQNKVYN 113 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTG +H+GH R A +G TLA+++ +G +V REYYIND G QI+ LA S+F R Sbjct: 114 VEFVSANPTGYLHLGHVRSAAIGATLANVLEHAGNKVIREYYINDNGVQIDNLAKSLFAR 173 Query: 185 YQQALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 YQQ ++N + +PE Y G + + V + DKY + L E L K+ + Sbjct: 174 YQQ-IFNPNFAMPEDGYFGQDIIWAAQQVFDLVKDKYQQKSL--ENEGVLSFFKETGTKI 230 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 ++ I+ DL + I D+F SE ++ IDNL K T Sbjct: 231 FLEEIKKDLAQIGIHFDVFSSEKKLYQDKK------IDNLL------------SSLKHTY 272 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF-DNMIYVMGSD 359 K D L +T GDD DR L+K DG+YTYF D+ Y K + D +I V G+D Sbjct: 273 KKD---DALWLETTKFGDDKDRVLIKQDGTYTYFTPDITYHLQKLQSNNPDKLINVWGAD 329 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYV+R+++ A ++ +++ L+ +LV+L ++ +KMSKR G TL+ +++ Sbjct: 330 HIGYVQRMKS-ALSILGYPNKVDFLIYQLVKLIKNNQELKMSKRRGTSFTLKDLLELCSK 388 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D++R+ M+ R + LDFD + + S +NPV+ +QY+YAR + +++ Sbjct: 389 DAIRYFMINRSENTNLDFDLDQANQISDQNPVYIIQYSYARIAQLLLKSE---------- 438 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 S F+ +E++LI L E+ +I T + L YL +LA F+ +S+ Sbjct: 439 --IKEYQATSFFEENEIKLINILKEFNEIIATITKNYKINLLNQYLLNLAKTFNSFYSNS 496 Query: 540 R--ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + NP N + L L LV A I+ GL +IGV M Sbjct: 497 KIIGNP-------NEKNL----LALVKATGIILKIGLKLIGVSIKERM 533 >gi|294660188|ref|NP_852794.2| arginyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)] gi|298286868|sp|Q7NC67|SYR_MYCGA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|284811838|gb|AAP56362.2| arginyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)] gi|284930254|gb|ADC30193.1| arginyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)] Length = 549 Score = 243 bits (620), Expect = 7e-62, Method: Compositional matrix adjust. Identities = 163/590 (27%), Positives = 296/590 (50%), Gaps = 49/590 (8%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 +F +++ + LK+++ VE +I++ ++ G S+N AM+LS+ +P Sbjct: 2 VFKKIKTQIDHALKQLNLPTDVE------YLIQQTKNIQFGDFSSNVAMVLSKRQNKNPQ 55 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 IA+ I+ ++ + + + + + GFIN +LS +L + + + + Sbjct: 56 EIAKQIIEQLNPN-EFEKITFSKPGFINFFLSNQDKLVVLKRLQETNYSVEKLPKEEQES 114 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 +NIEFVSANPTG +H+GH R A GD L++++ G+ VT+EY+IND G Q++ ALS Sbjct: 115 INIEFVSANPTGFLHLGHVRNAYTGDVLSNILRAVGHNVTKEYWINDLGNQVSLFALSTI 174 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-------KWLPIVKD 235 RY Q L N +LP+ Y G V +E+ + ++ + E K + Sbjct: 175 IRYLQELGINKYELPDDSYHGKEPIFVAEEMIKDFGNKYQDIKIEDNKIVDSKIANELTQ 234 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 Y M+ I+ DL+++ ++ D++ SE ++ + + ++++N + ++YE Sbjct: 235 YCTNKMLHFIKQDLESIGVKMDVWTSEKVVYQSNT--LTELLNNQLKD-HIYE------- 284 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 + R+T GDD DR ++K + TY+ D+A K++RGFD +I V Sbjct: 285 ---------QDGAVWLRTTDGGDDKDRVIIKENKQPTYYGTDIANHYLKHKRGFDRLINV 335 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 G+DH G++ R A KK + V+L E+V+L +D IK SKR G+ I++ +++ Sbjct: 336 WGADHFGHILRTAYAAELTGIKKGKFVVVLIEMVKLLKDNKEIKFSKRLGNAISIPDMLE 395 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 + D+ R+ ML + + + D ++ NPV+YVQYA+AR + +A+ I Sbjct: 396 FLSKDASRWFMLNQSWTSGIRIDVDLTNKKDSSNPVYYVQYAHARIHKLLTKAEHI---- 451 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 DL N+ S+ + + ++ +LA + + N E KL ++Y L FH Sbjct: 452 --DLNKVNLSLLNSDVERT---MVNYLASFEHYVHNVATTYEVNKLLNFVYTLTQSFHS- 505 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W + E + ++ RL L A+ ++IN L++ G+E+ +M Sbjct: 506 WYNSHE------ILNQKDEIKQTRLLLAKAIKNLINYLLSLFGIEAVEQM 549 >gi|206895636|ref|YP_002246999.1| arginyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265] gi|206738253|gb|ACI17331.1| arginyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265] Length = 526 Score = 243 bits (619), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 165/517 (31%), Positives = 263/517 (50%), Gaps = 51/517 (9%) Query: 39 DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98 D G + +L++ L P IA+ I ++ ++V KG++N+ + + Sbjct: 34 DITMGDYAVPIGFVLAKKLRTAPEKIAQTIAENLQGPFRAEAV----KGYVNVTMDDDWW 89 Query: 99 RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158 LS +S +Y KV +E+VSANPTGP+H+GH R AVVG LA+L+ Sbjct: 90 LDRLSQGFISYPQYS-------GKVLVEYVSANPTGPIHIGHGRGAVVGSVLANLLDRVY 142 Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218 E+Y+NDAG QI SV R ++ L D +LPE Y G Y+ + K + D+Y+ Sbjct: 143 DFADSEFYVNDAGEQIRKFCKSVEIRIRE-LKGEDVELPEDAYHGDYVVDIAKSILDRYN 201 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 + L+ +E+W + D +V M K ++ L+ L + ++ SE R + P R +I Sbjct: 202 WDALS-EDEQWNVLWND-AVDMMRKWHKETLEKLGVTMKVWTSER-LIRQEGWPER-VIQ 257 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 L +GY YE L F+ST+ GDD DR L+KS+G YTY+ D+ Sbjct: 258 LLQDKGYAYE----------------QDGALWFKSTIFGDDKDRVLVKSNGEYTYYLVDI 301 Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 AY K RG++ +I V G+DH G+V R+ A A+ + V+L + VR +R G+ + Sbjct: 302 AYHMEKIHRGYNVLINVWGADHIGHVPRMNAALTALGFPDC-LTVVLVQTVRFWRQGVAV 360 Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 MSKR G+F+TL ++DE+G D+ R M + R +DFD K+++ +NPV+Y+QYAY Sbjct: 361 AMSKRKGEFLTLDELIDEIGKDAARIMFITRSVDATIDFDIEVAKQKAMDNPVYYIQYAY 420 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 R ++I + ++ F +V FD E L+ L + + A +P Sbjct: 421 VRAKNILTRTEE-------RQFGSSV-----GFDPHERTLLRLLNAFQERMVLAVRKLDP 468 Query: 519 YKLAFYLYDLASVFHGHWSHGR------ENPRLRFVQ 549 + + Y ++L+ FH + R EN R + V+ Sbjct: 469 FVIESYAWELSDAFHKFYQFDRVIGSEYENARWKLVE 505 >gi|27262256|gb|AAN87409.1| Arginyl-tRNA synthetase [Heliobacillus mobilis] Length = 392 Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 135/373 (36%), Positives = 209/373 (56%), Gaps = 19/373 (5%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 L + +E PR+ HG +TN AM +++ ++P +AE IVA I + V IAG GF Sbjct: 33 LPTVALEVPREKQHGDFATNVAMTMAKQARMNPRQLAEKIVAHIDRGDWLKDVQIAGPGF 92 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 IN L +L +L ++ + YG + G G +V +EFVSANPTG +H+G+ R A +GD Sbjct: 93 INFTLHHHWLYPVLPAVQQTDDRYGASQAGAGKRVQVEFVSANPTGLLHMGNARGAALGD 152 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 TLA+L+ +G++VT+E+YINDAG QI A S+ RY Q L D PE Y G + Sbjct: 153 TLANLLRLAGFDVTKEFYINDAGNQIENFAKSLEARYLQ-LLGQDVPFPEEGYHGEDVAE 211 Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 + L K + + ++ Y++Q + IR+ L + +DI+ SE H Sbjct: 212 TMRGLIAKDGDKYVPMETTLRRELLVKYALQEKLSGIRESLARFGVDYDIWFSEQSLH-- 269 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 D IR+ ++ L GY+YE + L F++T +G++ D L++S+ Sbjct: 270 DSGAIRETLETLRANGYIYE----------------NEGALWFKATSLGEEKDEVLVRSN 313 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 G TYFAAD+AY K K++RGFD +I + G+DH G+V R++ AV ++V+L +L Sbjct: 314 GIPTYFAADIAYHKNKFDRGFDWVINIWGADHHGHVSRIKNAVKAVGYNSENLDVILMQL 373 Query: 389 VRLYRDGMPIKMS 401 VRL++ G ++MS Sbjct: 374 VRLFKGGEIVRMS 386 >gi|304372891|ref|YP_003856100.1| Arginyl-tRNA synthetase 1 [Mycoplasma hyorhinis HUB-1] gi|304309082|gb|ADM21562.1| Arginyl-tRNA synthetase 1 [Mycoplasma hyorhinis HUB-1] Length = 533 Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 191/588 (32%), Positives = 300/588 (51%), Gaps = 75/588 (12%) Query: 17 EIDCKIK-VEKKILDRI-----VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 +ID +IK V +KI++ V+ P +H STN AM+++ LD + A +V Sbjct: 2 QIDEQIKQVLQKIINNFGYEANVVLTPSK-SHADYSTNLAMVVASKYKLDVIDFATKVVE 60 Query: 71 RIKIDPDVDSVF-----IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV-N 124 +I D D +F + GFIN ++S + I+++I++ G + NL K KV N Sbjct: 61 QI----DKDKLFLTKIEVVKPGFINFFVSNTSYANIVNNIILEGENFA-NL--KQNKVYN 113 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTG +H+GH R A +G TLA+++ +G +V REYYIND G QI+ LA S+F R Sbjct: 114 VEFVSANPTGYLHLGHVRSAAIGATLANVLEHAGNKVIREYYINDNGVQIDNLAKSLFAR 173 Query: 185 YQQALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 YQQ ++N + +PE Y G + + V + DKY + L E L K+ + Sbjct: 174 YQQ-IFNPNFAMPEDGYFGQDIIWAAQQVFDLVKDKYQQKSL--ENEGVLSFFKETGTKI 230 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 ++ I+ DL + I D+F SE ++ IDNL K T Sbjct: 231 FLEEIKKDLAQIGIHFDVFSSEKKLYQDKK------IDNLL------------SSLKHTY 272 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF-DNMIYVMGSD 359 K D L +T GDD DR L+K DG+YTYF D+ Y K + D +I V G+D Sbjct: 273 KKD---DALWLETTKFGDDKDRVLIKQDGTYTYFTPDITYHLQKLQSNNPDKLINVWGAD 329 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYV+R+++ A ++ +++ L+ +LV+L ++ +KMSKR G L+ +++ Sbjct: 330 HIGYVERMKS-ALSILGYPNKVDFLIYQLVKLIKNNQELKMSKRRGTSFALKDLLELCSK 388 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D++R+ M+ R + LDFD + + S +NPV+ +QY+YAR + +++ Sbjct: 389 DAIRYFMINRSENTNLDFDLDQANQISDQNPVYIIQYSYARITQLLLKSE---------- 438 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 S F+ +E++LI L E+ +I T + L YL +LA F+ +S+ Sbjct: 439 --IKEYQATSFFEENEIKLINILKEFNEIIATITKNYKINLLNQYLLNLAKTFNSFYSNS 496 Query: 540 R--ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + NP N + L L LV A ++ GL +IGV M Sbjct: 497 KIIGNP-------NEKNL----LALVKATGIVLKIGLKLIGVSIKERM 533 >gi|284931022|gb|ADC30960.1| arginyl-tRNA synthetase [Mycoplasma gallisepticum str. F] Length = 549 Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 161/590 (27%), Positives = 294/590 (49%), Gaps = 49/590 (8%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 +F +++ + LK+++ +E +I++ ++ G S+N AM+LS+ +P Sbjct: 2 VFKKIKTQIDHALKQLNLPTDIE------YLIQQTKNIQFGDFSSNVAMVLSKRQNKNPE 55 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 IA+ I+ ++ + + + + + GFIN +LS +L + + + + Sbjct: 56 EIAKQIIEQLNPN-EFEKITFSKPGFINFFLSNQDKLVVLKRLQKTNYSVEKLPKEEQES 114 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 +NIEFVSANPTG +H+GH R + GD L +++ G+ VT+EY+IND G Q++ ALS Sbjct: 115 INIEFVSANPTGFLHLGHVRNSYTGDVLGNILRAVGHNVTKEYWINDLGNQVSLFALSTI 174 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-------KWLPIVKD 235 RY Q L N LP+ Y G V +E+ + ++ + E K + Sbjct: 175 IRYLQKLGINKYQLPDDSYHGKEPIFVAEEMIKDFGNKYQDIKIEDNKIVDSKIANELTQ 234 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 Y M+ I+ DL+++ ++ D++ SE ++ + + ++++N + ++YE Sbjct: 235 YCTNKMLHFIKQDLESIGVKMDVWTSEKVVYQSNT--LTELLNNQLKD-HIYE------- 284 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 + R+T GDD DR ++K + TY+ D+A K++RGFD +I V Sbjct: 285 ---------QDGAVWLRTTDGGDDKDRVIIKENKQPTYYGTDIANHYLKHKRGFDRLINV 335 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 G+DH G++ R A KK + V+L E+V+L +D IK SKR G+ I++ +++ Sbjct: 336 WGADHFGHILRTAYAAELTGIKKGKFVVVLIEMVKLLKDNKEIKFSKRLGNAISIPDMLE 395 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 + D+ R+ ML + + + D ++ NPV+YVQYA+AR + +A+ I Sbjct: 396 FLSKDASRWFMLNQSWTSGIKIDVDLTNKKDSSNPVYYVQYAHARIHKLLTKAEHI---- 451 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 DL N+ S+ + + ++ +LA + + N E KL ++Y L FH Sbjct: 452 --DLTKVNLSLLNSDVERT---MVNYLASFEHYVHNVATTYEVNKLLNFVYTLTQSFHS- 505 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W + E + ++ RL L A+ ++IN L++ G+E+ +M Sbjct: 506 WYNSHE------ILNQKDEIKQTRLLLAKAIKNLINYLLSLFGIEAVEQM 549 >gi|183221471|ref|YP_001839467.1| arginyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911558|ref|YP_001963113.1| arginyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|226701381|sp|B0SB29|SYR_LEPBA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|226701382|sp|B0SSV1|SYR_LEPBP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|167776234|gb|ABZ94535.1| Arginine--tRNA ligase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779893|gb|ABZ98191.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase; ArgRS) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 594 Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 178/583 (30%), Positives = 286/583 (49%), Gaps = 58/583 (9%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 +I IE RD G S+ A+ L L+P IAE +++ IK + + V + GFIN Sbjct: 36 KIRIEYSRDEKFGDYSSPFALENKNILKLNPKEIAEGVLSEIKNETLFEFVTFSPPGFIN 95 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + +L + + ++ + + + + + +EFVSANPTGPM++ R A GD L Sbjct: 96 FRIRSQFLIQYTNQVMSPMVTFAKT--DEKQSILLEFVSANPTGPMNIVSARSAAYGDAL 153 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY-----QQALYNNDSD---------- 195 A+L+ G+ V RE+Y+ND G Q+ L ++V R ++ + D Sbjct: 154 ANLLLSLGHTVKREFYVNDYGNQVYLLGVAVLLRIFEEKGEKISFQEDESKESVFTLIEK 213 Query: 196 --LPEGYYPGVYLKHVGKE-LADKYSS-ELLNFPEEK-WLPIVKD---YSVQAMMKIIRD 247 LP+ Y G Y++ + KE L++K S ++ + + K W + D Y+V+ + ++ Sbjct: 214 RILPKESYRGEYIRDIAKEVLSNKTKSIQVEEWIQNKNWDECIHDLSKYAVEYNLSRQKE 273 Query: 248 DLKALNIQHDIFISEDDFHR-GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 DLK + D F SE H GD ++N+ P K +D Sbjct: 274 DLKLFGVHFDQFFSERSLHEAGD-------VENV------------PTLLKKEDVSTIDG 314 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366 K L F ST GDD DR + + DG TY AD+AY KY+RGF +I + G DH GY+ R Sbjct: 315 K-LHFLSTQYGDDKDRVIRREDGRPTYLMADIAYHFDKYKRGFTKLIDIWGPDHYGYIAR 373 Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV---GSDSVR 423 L+ + + +L+ + V L + +KMSKR G F T+R ++ + G D R Sbjct: 374 LKGAVLSFGKSNDSFLILIAQQVNLIENKEKVKMSKRLGIFQTMRDLLSYLGKNGKDVGR 433 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + L R + LDFD K++S +NPVFY+QYA+AR SIFR+ + D P+ Sbjct: 434 YFFLMRSSDAPLDFDLDLAKDESDKNPVFYIQYAHARICSIFRELQISIADWS---IPK- 489 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 V+ + L+L+ +A + + + EP++L YL L+ F +SH ++ Sbjct: 490 VVSGDCFQSEERLRLLFWVARFQEEVYDTATNLEPHRLTNYLQSLSKAFTKFYSH--KDN 547 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586 R++ Q R+ + L+ I SGL ++G+ SP +MS Sbjct: 548 RIKEKQGEEREQLLF---LILFTKRAIASGLELLGISSPEKMS 587 >gi|196017893|ref|XP_002118673.1| hypothetical protein TRIADDRAFT_62694 [Trichoplax adhaerens] gi|190578490|gb|EDV18839.1| hypothetical protein TRIADDRAFT_62694 [Trichoplax adhaerens] Length = 344 Score = 237 bits (604), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 124/323 (38%), Positives = 198/323 (61%), Gaps = 4/323 (1%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 + I +E P++ +G LS+N ++I+++ L+P +A+ + + + + + + I G GF+ Sbjct: 26 NEIKVEYPKNEDYGDLSSNVSIIIAKKKKLNPRDVAKELSSILLANEYISEISIEGAGFL 85 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N + P + K L +V G Y + IG G K+N+EFVSANPTGP+H+GH + AV GD Sbjct: 86 NFKIKPYFWHKFLKKLVNLGHNYPKIDIGNGEKINVEFVSANPTGPLHLGHAKGAVFGDV 145 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 +++L++ GY V RE+YINDAG QI TL S+ RY+Q L +L + YPG YL + Sbjct: 146 ISNLLSKCGYNVIREFYINDAGNQIKTLTKSLEIRYKQLL-GEKIELDKDCYPGEYLIDI 204 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 L D++ ++L +K+++V+ ++KII+DDL L + HD FISE + Sbjct: 205 ATILKDEFKNKLDTLTNNDREEFLKNFAVERILKIIKDDLSKLGVIHDYFISEKKLI--E 262 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + + I L + +Y+GIL PKS+ + ++Q+LF+ST GDD+DR ++KS+G Sbjct: 263 QNKVESCIYFLKEKNLLYKGILDKPKSEENNYWE-SKEQILFKSTKFGDDIDRAVIKSNG 321 Query: 330 SYTYFAADLAYFKCKYERGFDNM 352 YTYF +D+AY K +RGF+NM Sbjct: 322 EYTYFVSDIAYHLDKIKRGFNNM 344 >gi|301062427|ref|ZP_07203082.1| arginine--tRNA ligase [delta proteobacterium NaphS2] gi|300443468|gb|EFK07578.1| arginine--tRNA ligase [delta proteobacterium NaphS2] Length = 399 Score = 233 bits (595), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 147/428 (34%), Positives = 239/428 (55%), Gaps = 32/428 (7%) Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 + RE+Y+NDAG QI L S++ R +Q N + PE Y G Y+ + +A + Sbjct: 1 MVREFYVNDAGLQIRMLGESIWARMKQK-ENPNFVFPENGYHGDYILDLADTIAKEIDLS 59 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280 N P+E +D + M+ I+ L I D++ SE+D H + +D++ Sbjct: 60 SKN-PDEAVALCAQD-GKEMMLTEIQRALDRFRINFDVWSSEEDLHA--SGLLDQTLDSI 115 Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLF-RSTMVGDDVDRPLLKSDGSYTYFAADLA 339 +G++Y DR+ ++ +++ GDD DR + KSDG YTYFA+D+A Sbjct: 116 QAKGHLY-----------------DREGAVWIKTSQFGDDKDRVIRKSDGQYTYFASDIA 158 Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399 Y K+ RGF I + G+DH GYV R++A + + ++VLL +LV+L+ +G ++ Sbjct: 159 YHLEKHRRGFTKAINIWGADHHGYVPRVKAALLSHGIPENWLSVLLIQLVKLWENGQELR 218 Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459 MSKRAG F+TL+ ++DEVG D+ RF+ L + + LD D +K+Q +NPV+YVQYA+A Sbjct: 219 MSKRAGSFVTLQELLDEVGVDAARFVFLTKSHDSPLDVDMDLIKKQDSDNPVYYVQYAHA 278 Query: 460 RCRSIFRQ-AKDIFPDLD-FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 R SI R+ A + LD D + +E E+ +I ++E+P ++E+ + E Sbjct: 279 RICSIIRKAASEGIAVLDHIDGISEKLALKE------EMAIIRTMSEFPALLEDISKTLE 332 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 ++L +YL LA+ FH +++ G +N LR V ++ LT RL LV V +I +GL ++ Sbjct: 333 AHRLTYYLTHLAASFHRYFNMGLKNSELRVV-TEDKTLTQARLILVSGVKIVIANGLRLL 391 Query: 578 GVESPNEM 585 GV +P +M Sbjct: 392 GVSAPEKM 399 >gi|71894371|ref|YP_278479.1| arginyl-tRNA synthetase [Mycoplasma synoviae 53] gi|71851159|gb|AAZ43768.1| arginyl-tRNA synthetase [Mycoplasma synoviae 53] Length = 551 Score = 233 bits (594), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 155/498 (31%), Positives = 252/498 (50%), Gaps = 36/498 (7%) Query: 44 HLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILS 103 H STN A L++ L +P+ +A+ I + + + + V GFINL + Y + Sbjct: 53 HYSTNIAFTLAKSLKTNPIELAKNIQSELLQEDLYERVDFIAPGFINLVVKDIYFNNAIY 112 Query: 104 SIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR 163 I+ +G+ K+NIE+VSANPTG +HVGH R AVVG + +++ F+GY V Sbjct: 113 EIIKLKNNFGK-FKANNQKINIEYVSANPTGFLHVGHVRGAVVGKVIYNVLKFAGYSVEG 171 Query: 164 EYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223 EYY+N+AG QIN LA SV + Y + L+ S E Y G + K++ + ++ + Sbjct: 172 EYYVNNAGNQINLLARSVLYWYLK-LHKISSPKVEDGYNGKDILLCAKKIKKVFGNKFIK 230 Query: 224 FPE-EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282 E K K +S + + + I DL L I D E + DI Sbjct: 231 LKESHKLFADFKKFSYEILFEEILKDLWKLKINFDSVFYESSLYENS-----DI------ 279 Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342 E +L K+KT Q D L+ +++ GDD DR L+KSD S+TYF D+AY Sbjct: 280 -----EKVLEKLKNKTYQ----DGNSLVLKTSEYGDDKDRVLVKSDKSFTYFLPDIAYHY 330 Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402 K+++ D +I + G+DH GY++R++A ++ + +++L +LVRL ++G KMSK Sbjct: 331 LKFKKA-DKLINIWGADHLGYIQRIKAAMHFLNLNDSNLDILTLQLVRLIKNGQEFKMSK 389 Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462 R G +TL+ ++ DS+ F ML R ++ DFD K NPV+ V+Y+Y+R Sbjct: 390 RKGTSVTLKDLLKVSNKDSIFFGMLLRDSNSKYDFDIDKNNASDINNPVYIVKYSYSRAY 449 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 S+ + ++ +E+ +L++ L + +I T +P L Sbjct: 450 SLSQN------------LAKHQKTKEAFLSDKAKKLVLELDFFQELISVITKTLKPNLLT 497 Query: 523 FYLYDLASVFHGHWSHGR 540 YL +LA++F+ +S + Sbjct: 498 QYLINLANLFNSFYSEKK 515 >gi|27379867|ref|NP_771396.1| arginyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110] gi|27353020|dbj|BAC50021.1| bll4756 [Bradyrhizobium japonicum USDA 110] Length = 225 Score = 233 bits (593), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 118/224 (52%), Positives = 155/224 (69%), Gaps = 5/224 (2%) Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 ++A A + K ++V + +LV+L R+G P+KMSKR+GDF+TLR VVDEVG D+VRFMM Sbjct: 1 MQAAVKATTSGKGALDVKIVQLVKLLRNGEPVKMSKRSGDFVTLREVVDEVGQDAVRFMM 60 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVI 485 L+RKN +LDFD KV EQS++NPVFYVQY +AR SIFR A+ ++FPDL D R Sbjct: 61 LYRKNDAVLDFDLAKVMEQSRDNPVFYVQYGHARGHSIFRNARAEVFPDLPDDTAKRIAW 120 Query: 486 PQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 ES D EL L+ LA YPR++E A A EP+++AFYLYDLAS FH W+ GR+ Sbjct: 121 LSESAVERLSDPVELDLLKRLAIYPRMLEAAAAAHEPHRIAFYLYDLASEFHALWTKGRD 180 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P LRF+ N+ LT RL +V V S++ SGL I+GV +P+EM Sbjct: 181 LPYLRFIINNDADLTKARLAMVQGVVSVLASGLAILGVHAPDEM 224 >gi|257460580|ref|ZP_05625681.1| arginyl-tRNA synthetase [Campylobacter gracilis RM3268] gi|257441911|gb|EEV17053.1| arginyl-tRNA synthetase [Campylobacter gracilis RM3268] Length = 598 Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 149/486 (30%), Positives = 246/486 (50%), Gaps = 46/486 (9%) Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 +S+ V + RN K+ +E++SANPTGP+H+GH R AV GDT A + + G+ V Sbjct: 156 NSVAVPKCDEARNSAAASQKILLEYISANPTGPLHIGHVRGAVYGDTFARIGGYLGHRVD 215 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222 EYYINDAG QI L S+ R ++ L D PE YY G Y+ + ++ E+ Sbjct: 216 TEYYINDAGNQIELLGTSIALRARE-LAGEDVSYPEKYYRGEYIDEIIPLAHAQFGDEI- 273 Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282 F +E + + +++ ++KII+ DL I + SE + G+ P I L R Sbjct: 274 -FRDESRILQLAEFAKDEVLKIIQKDLADAGIHIQNWASEKSLY-GELEPT---IRKLER 328 Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342 G +YE ++ RS+ +GD+ DR +++ D TY A D+ Y Sbjct: 329 SGKMYE----------------QESKIWIRSSQLGDEKDRVVIREDARPTYLAGDIVYHN 372 Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402 K+ERG++ I + G+DH GY+ RL+A + ++++ ++L ++V L +DG KMSK Sbjct: 373 NKFERGYERCINIWGADHHGYIARLKAAVHFLGYDESRLEIILMQMVNLLKDGQTYKMSK 432 Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462 RAG+ I + V+ +G D++RF+ + +K L+FD ++ + NP+FY+ YA+AR Sbjct: 433 RAGNAILMSDVLAAIGRDAMRFIFISKKGETPLEFDVDELAREDSSNPIFYINYAHARVN 492 Query: 463 SIFRQAKDIFPDL---DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 IF +A D+ DF D + L L ++ +A ++ Sbjct: 493 QIFTKAGKREADVLGADF-----------GTLDEAGLGLAFAALGLNEILNDAFNSRGLQ 541 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 KL +L LA+ FH +++ EN R V + N +L+L VA I + ++G+ Sbjct: 542 KLPDFLKALAADFHKYYN---EN---RVVGSENED---AKLKLFALVALSIRTAFALMGL 592 Query: 580 ESPNEM 585 + +M Sbjct: 593 SAKEKM 598 Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 26/175 (14%) Query: 27 KILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85 KIL R +V+E+P+D + H ++ A L++ L P IAE + A+ K D ++ S A Sbjct: 11 KILSRKVVLEKPKDKSLAHYASPEAFALAKELRKAPKLIAEELAAKFK-DSEILSA-TAV 68 Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRN--LIGKGTKVNIEFVSANPTGPMHVGHCRC 143 G++N +L P L + + + G ++ +N +G+G E + C Sbjct: 69 NGYLNFHLKPVVLGALAENALRLGGDFAKNDAELGRGILPASERI------------CAG 116 Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198 V + A+ +A SG NDA N+ A F +N +P+ Sbjct: 117 EPVCNGFAANLAASG---------NDAAKSQNSAARQNFISQNSEAASNSVAVPK 162 >gi|218514942|ref|ZP_03511782.1| arginyl-tRNA synthetase [Rhizobium etli 8C-3] Length = 187 Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 105/188 (55%), Positives = 147/188 (78%), Gaps = 3/188 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58 M LF DF +R+K L++ID ++ ++ LD RI +E PRD +HG ++TNAAM+L++PLG Sbjct: 1 MNLFTDFEARIKTALEQIDL-VREKRSELDFGRITVEPPRDASHGDVATNAAMVLAKPLG 59 Query: 59 LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +P +A++I+A++K D DV V +AG GFIN+ LS Y +++L+S++ SG +YGR+ +G Sbjct: 60 SNPRALADVIIAKLKEDADVADVSVAGPGFINIRLSVGYWQRLLASMINSGTDYGRSTLG 119 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ LA Sbjct: 120 AGRKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVLA 179 Query: 179 LSVFWRYQ 186 SVF RY+ Sbjct: 180 RSVFLRYR 187 >gi|12045239|ref|NP_073050.1| arginyl-tRNA synthetase [Mycoplasma genitalium G37] gi|255660405|ref|ZP_05405814.1| arginyl-tRNA synthetase [Mycoplasma genitalium G37] gi|1351172|sp|P47618|SYR_MYCGE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|3844966|gb|AAC71605.1| arginyl-tRNA synthetase [Mycoplasma genitalium G37] gi|166079023|gb|ABY79641.1| arginyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0] Length = 537 Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 149/511 (29%), Positives = 250/511 (48%), Gaps = 49/511 (9%) Query: 80 SVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138 +VFIA FIN +S YL ++ + + K K+ IE VSANPTG +H+ Sbjct: 71 NVFIANNNFINFQISYQKYLEYLIKTPCFTK---------KNIKILIESVSANPTGRIHL 121 Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198 GH R A GD L +L GY EY++ND G Q + SV+ Q P+ Sbjct: 122 GHVRIAFFGDVLNNLAKLLGYTTVCEYWVNDYGQQARVFSFSVYQSLQLKKNIAIQQHPD 181 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV---QAMMKIIRDDLKALNIQ 255 GY G+ + + E+ + + + LNF E + + V Q ++ +I+ DL +++ Sbjct: 182 GY-SGIVIDKIASEI-ENFPVDNLNFEEFCKTSFLDHFLVNCTQKVLSLIKSDLNKIHVF 239 Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315 D + E + + + D+++ L Y Y+ L ++T+ Sbjct: 240 IDSWKFESEIVK--KTNFNDLLEQLKPNSYFYQD-----------------NALWLKTTL 280 Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE-AVAAAV 374 GDD DR L++SD +YF D+AY K +RGFD + V G+DH G++KR+ A A Sbjct: 281 YGDDKDRVLIRSDKRASYFGTDVAYHLEKLQRGFDILFNVWGTDHEGHIKRMYCAFDALK 340 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434 + K + + +LV LY++ +++SKRAG+ IT+ ++ + D+ R+ ML + N + Sbjct: 341 NTTKTSLKIFALQLVTLYKNKELVRLSKRAGNVITIETMLSMISEDAARWFMLSQNNGTI 400 Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494 + D Q+ NPV+YVQYA+AR SI R A D ++ +++ E Sbjct: 401 IKIDLDIANLQNSANPVYYVQYAFARMNSILRIAN---SDQLKEITDCSLLINE-----K 452 Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554 E+ L+ L YP +++ A E + L +LY+ AS+FH + + N N Sbjct: 453 EISLLNQLVYYPFMLQKAMETGELHLLTNFLYETASLFHSWYKVCKINDD------KNSL 506 Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L+ RL L+ ++ I+ L+++ + +P +M Sbjct: 507 LSAQRLALLRSLQFIVKQILDVLKISTPQQM 537 >gi|307610758|emb|CBX00369.1| arginine tRNA synthetase [Legionella pneumophila 130b] Length = 280 Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 106/277 (38%), Positives = 174/277 (62%), Gaps = 10/277 (3%) Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368 L FR+T GD+ DR L++++G TYFA+D+AY KY+RGFD +I + G+DH GYV R++ Sbjct: 14 LWFRATDFGDEKDRVLVRANGQTTYFASDVAYHWNKYDRGFDRVIDIFGADHHGYVTRIK 73 Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428 A+ ++ ++V+L + LYR G ++MS R+G F+TLR + +EVG+D+ R+ + Sbjct: 74 TAVKALGHDESALDVILVQFAILYRGGDRVQMSTRSGSFVTLRELREEVGNDAARYFYVA 133 Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488 RK + +DFD K +S +NPV+Y+QYA+AR S+ RQ K+ D D+ +N+ E Sbjct: 134 RKPEQHMDFDLDLAKSESSDNPVYYIQYAHARICSVLRQLKERSLKWDKDMGLKNLDLLE 193 Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548 + +T+ + LI A YP VI++A + EP++LA+YL +LA+ H +++ + + Sbjct: 194 QQHETTLISLI---ARYPEVIQSAAASCEPHQLAYYLRELANGLHSYYNAIQ-------L 243 Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +L RL L+ +V ++N+GL I+GV +P M Sbjct: 244 LCEQEQLRCARLCLLESVRQVLNNGLAILGVSAPESM 280 >gi|291533468|emb|CBL06581.1| Arginyl-tRNA synthetase [Megamonas hypermegale ART12/1] Length = 271 Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 116/278 (41%), Positives = 162/278 (58%), Gaps = 15/278 (5%) Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368 L +ST GDD DR +++ +G TY AAD+AY K+ER FD +I + G+DH GYV R++ Sbjct: 8 LWLKSTAYGDDKDRVVIRDNGVPTYLAADIAYHDNKFERKFDKLINIWGADHHGYVCRVK 67 Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428 A AA+ + VLL ++V LYRDG +KMSKR G +TL +++EVG+D+ RF + Sbjct: 68 AAMAALGYNADDLEVLLLQMVSLYRDGELVKMSKRTGQSVTLSELIEEVGADAARFFFIM 127 Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488 R LDFD K QS ENPV+YVQYAYAR SIFRQ K+ + + PQ Sbjct: 128 RSLDSQLDFDLNLAKSQSNENPVYYVQYAYARICSIFRQMKEAGIETTEN-------PQL 180 Query: 489 SEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 S D +E+ LI L YP I A + P+++A Y++DLAS+FH ++ R Sbjct: 181 SLLTDEAEIALIKKLLSYPDEIATAAKNKAPHRIATYVHDLASMFHSFYNKCR------- 233 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + KL RL L AV ++ L I+GV +P +M Sbjct: 234 ILGVDAKLAGARLALCLAVKYVLAHALAILGVNAPEKM 271 >gi|13508295|ref|NP_110245.1| arginyl-tRNA synthetase [Mycoplasma pneumoniae M129] gi|2501047|sp|P75222|SYR_MYCPN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|1673957|gb|AAB95934.1| arginyl-tRNA synthetase [Mycoplasma pneumoniae M129] Length = 537 Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 151/523 (28%), Positives = 250/523 (47%), Gaps = 75/523 (14%) Query: 81 VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140 VF+A FIN +SP L + K TKV IE+VSANPTG +H+GH Sbjct: 72 VFVANNNFINFEISPQKYLDFLKT--------KPTFAPKPTKVLIEWVSANPTGELHLGH 123 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND----SDL 196 R A G L +LM F G++ REY++ND G Q SV+ QAL+ + Sbjct: 124 VRNAFFGHVLNNLMVFLGFQTVREYWVNDYGQQARVFGFSVY----QALHLQQNIKVTPH 179 Query: 197 PEGYYPGVYLKHVGKELA----DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252 P+GY G + + K + DK S E F ++ +L + ++++I+ DL + Sbjct: 180 PDGY-EGELVDSIAKTITGIPLDKLSFE--EFLQQPFLDQLLADCTAKVLEVIKQDLATI 236 Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312 +I D + E S + D Y+ +L K + + D + + Sbjct: 237 HIHFDSWKFE--------SQVVKETD--------YKKLLTQFKDEAHYEKD---GAIWLK 277 Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372 +T+ GDD DR L++ D +YF D+AY K RGFD + + GSDH G++KR+ V Sbjct: 278 TTLYGDDKDRVLVRQDNRPSYFGTDVAYHLDKAARGFDLLYDIWGSDHEGHIKRMHCVYE 337 Query: 373 AVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431 + +K Q+ + +LV LY++ +++SKRAG+ IT++ ++ + D+ R+ ML + N Sbjct: 338 GLKIHQKCQLKITALQLVMLYKNKEIVRLSKRAGNVITIKQMLQMLSEDAARWFMLSQTN 397 Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491 + ++ D Q+ NPV+YVQYAYAR S+ + V+ Q + Sbjct: 398 NSIIKIDLDTANLQNSSNPVYYVQYAYARMCSVLK-----------------VVDQAALA 440 Query: 492 DTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 ++ L+ H L + ++E ++ E + L YLY+ A++FH + + N Sbjct: 441 QVNDCSLLTHEKEIALLDQLVYFKSLLEKVQVSHELHLLTNYLYETATLFHSWYKACKIN 500 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 Q N + ++ LQ +H V + L I+ + +P +M Sbjct: 501 DP---AQYNLTQQRLLLLQSLHHVFGQL---LQILNITAPQQM 537 >gi|83942562|ref|ZP_00955023.1| arginyl-tRNA synthetase [Sulfitobacter sp. EE-36] gi|83846655|gb|EAP84531.1| arginyl-tRNA synthetase [Sulfitobacter sp. EE-36] Length = 240 Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 98/222 (44%), Positives = 147/222 (66%), Gaps = 2/222 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFAD S + + L + + + + D I +E PRD AHG ++TNAAM+L++P + Sbjct: 1 MNLFADIRSLVLSTLDTLVADGFLPEGLSFDAITVEPPRDAAHGDMATNAAMVLAKPARM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + ++ DP + + +AG GF+NL LS + + ++ +++ G ++GR +G+ Sbjct: 61 KPRDIAEKLAEKLAEDPRITAADVAGPGFLNLRLSAAVWQGVVGAVLGQGTDFGRGDLGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGP+HVGH R AV GD LASL+ F+G++VTREYYIND GAQ++ LA Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGFDVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221 SV+ RY +A + + PEG YPG YL VG L +++ + Sbjct: 181 SVYLRYLEA-HGQEVAFPEGTYPGDYLIDVGAALKTTWATPI 221 >gi|301633574|gb|ADK87128.1| arginine--tRNA ligase [Mycoplasma pneumoniae FH] Length = 537 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 150/523 (28%), Positives = 249/523 (47%), Gaps = 75/523 (14%) Query: 81 VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140 VF+A FIN +SP L + K TKV IE+VSANPTG +H+GH Sbjct: 72 VFVANNNFINFEISPQKYLDFLKT--------KPTFAPKPTKVLIEWVSANPTGELHLGH 123 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND----SDL 196 R A G L +LM F G++ REY++ND G Q SV+ QAL+ + Sbjct: 124 VRNAFFGHVLNNLMVFLGFQTVREYWVNDYGQQARVFGFSVY----QALHLQQNIKVTPH 179 Query: 197 PEGYYPGVYLKHVGKELA----DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252 P+GY G + + K + D S E F ++ +L + ++++I+ DL + Sbjct: 180 PDGY-EGELVDSIAKTITGIPLDNISFE--EFLQQPFLDQLLADCTAKVLEVIKQDLATI 236 Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312 +I D + E S + D Y+ +L K + + D + + Sbjct: 237 HIHFDSWKFE--------SQVVKETD--------YKKLLTQFKDEAHYEKD---GAIWLK 277 Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372 +T+ GDD DR L++ D +YF D+AY K RGFD + + GSDH G++KR+ V Sbjct: 278 TTLYGDDKDRVLVRQDNRPSYFGTDVAYHLDKAARGFDLLYDIWGSDHEGHIKRMHCVYE 337 Query: 373 AVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431 + +K Q+ + +LV LY++ +++SKRAG+ IT++ ++ + D+ R+ ML + N Sbjct: 338 GLKIHQKCQLKITALQLVMLYKNKEIVRLSKRAGNVITIKQMLQMLSEDAARWFMLSQTN 397 Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491 + ++ D Q+ NPV+YVQYAYAR S+ + V+ Q + Sbjct: 398 NSIIKIDLDTANLQNSSNPVYYVQYAYARMCSVLK-----------------VVDQAALA 440 Query: 492 DTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 ++ L+ H L + ++E ++ E + L YLY+ A++FH + + N Sbjct: 441 QVNDCSLLTHEKEIALLDQLVYFKSLLEKVQVSHELHLLTNYLYETATLFHSWYKACKIN 500 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 Q N + ++ LQ +H V + L I+ + +P +M Sbjct: 501 DP---AQYNLTQQRLLLLQSLHHVFGQL---LQILNITAPQQM 537 >gi|218752998|ref|ZP_03531794.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503] Length = 352 Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 129/390 (33%), Positives = 196/390 (50%), Gaps = 47/390 (12%) Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 Y+ ++ +++ K + + L+ P+ + + V M I+ L D++ ED Sbjct: 1 YITNIAEQVLQK-APDALSLPDAELRETFRAIGVDLMFDHIKQSLHEFGTDFDVYTHEDS 59 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 H G + + I L G +YE K T R++ GDD DR + Sbjct: 60 MHTG--GRVENAIARLRETGNIYE------KDGAT----------WLRTSAFGDDKDRVV 101 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 +KSDG Y A DLAY+ K +RGFD IY++G+DH GY+ RL+A AAA + A + VL Sbjct: 102 IKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHGYIARLKAAAAAFGDDPATVEVL 161 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 + ++V L RDG P++MSKRAG +TL +V+ +G D+ R+ ++ +D D Sbjct: 162 IGQMVNLVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAARYSLIRSSVDTAIDIDLALWSS 221 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--- 501 S ENPV+YVQYA+AR ++ R A ++ +IP DT+ L+L+ H Sbjct: 222 ASNENPVYYVQYAHARLSALARNAAEL-----------ALIP-----DTNHLELLNHDKE 265 Query: 502 ------LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555 L E+PRV+E A +EP+++ YL DLA +H + R P+ L Sbjct: 266 GTLLRTLGEFPRVLETAASLREPHRVCRYLEDLAGDYHRFYDSCRVLPQ---GDEQPTDL 322 Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L A +I +GL IIGV +P M Sbjct: 323 HTARLALCQATRQVIANGLAIIGVTAPERM 352 >gi|289761447|ref|ZP_06520825.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503] gi|289708953|gb|EFD72969.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503] Length = 344 Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 127/377 (33%), Positives = 188/377 (49%), Gaps = 46/377 (12%) Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277 + + L+ P+ + + V M I+ L D++ ED H G + + I Sbjct: 5 APDALSLPDAELRETFRAIGVDLMFDHIKQSLHEFGTDFDVYTHEDSMHTG--GRVENAI 62 Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337 L G +YE K T R++ GDD DR ++KSDG Y A D Sbjct: 63 ARLRETGNIYE------KDGAT----------WLRTSAFGDDKDRVVIKSDGKPAYIAGD 106 Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397 LAY+ K +RGFD IY++G+DH GY+ RL+A AAA + A + VL+ ++V L RDG P Sbjct: 107 LAYYLDKRQRGFDLCIYMLGADHHGYIARLKAAAAAFGDDPATVEVLIGQMVNLVRDGQP 166 Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457 ++MSKRAG +TL +V+ +G D+ R+ ++ +D D S ENPV+YVQYA Sbjct: 167 VRMSKRAGTVLTLDDLVEAIGVDAARYSLIRSSVDTAIDIDLALWSSASNENPVYYVQYA 226 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH---------LAEYPRV 508 +AR ++ R A ++ +IP DT+ L+L+ H L E+PRV Sbjct: 227 HARLSALARNAAEL-----------ALIP-----DTNHLELLNHDKEGTLLRTLGEFPRV 270 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 +E A +EP+++ YL DLA +H + R P+ L RL L A Sbjct: 271 LETAASLREPHRVCRYLEDLAGDYHRFYDSCRVLPQ---GDEQPTDLHTARLALCQATRQ 327 Query: 569 IINSGLNIIGVESPNEM 585 +I +GL IIGV +P M Sbjct: 328 VIANGLAIIGVTAPERM 344 >gi|295400647|ref|ZP_06810624.1| Arginine--tRNA ligase [Geobacillus thermoglucosidasius C56-YS93] gi|294977228|gb|EFG52829.1| Arginine--tRNA ligase [Geobacillus thermoglucosidasius C56-YS93] Length = 302 Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 112/329 (34%), Positives = 178/329 (54%), Gaps = 30/329 (9%) Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ SE ++ I + + L +G++YE K T FRST Sbjct: 4 DVWYSETSLYKS--GKIDEALAVLRERGHIYE------KDGAT----------WFRSTTF 45 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD DR L+K DG+YTY D+AY + K RGF +I + G+DH GY+ R++A AA+ Sbjct: 46 GDDKDRVLIKQDGTYTYLLPDIAYHQDKLRRGFAKIINIWGADHHGYIPRMKAAIAALGY 105 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 + V + +LV LY++G +KMSKR G +T+R +++EVG D+ R+ R + LD Sbjct: 106 DPDVLEVEIIQLVNLYQNGERVKMSKRTGKAVTMRELMEEVGLDATRYFFAMRSSDTHLD 165 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD QS ENPV+YVQYA+AR SI RQ +++ + DL + I E E+ Sbjct: 166 FDMDLAVSQSNENPVYYVQYAHARVSSILRQGEELQLSYEGDL-QLDYIQTE-----KEI 219 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ L E+P + A + + P+++ Y+++LAS H ++ + + N + + Sbjct: 220 ELLKKLGEFPGAVSEAALKRMPHRITGYVFELASALHSFYNAE------KVLDPENAEKS 273 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L+ AV + + L +IGV +P +M Sbjct: 274 RARLALMKAVQITLQNALALIGVSAPEKM 302 >gi|321309631|ref|YP_004191960.1| arginyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1] gi|319801475|emb|CBY92121.1| arginyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1] Length = 557 Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 146/561 (26%), Positives = 262/561 (46%), Gaps = 58/561 (10%) Query: 37 PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS 96 +D G + TN A +S +P + E ++ ++ V S + GFIN++ SP Sbjct: 33 TKDYKFGDIFTNFACRISSKYKKNPKDVGEELLKQVGELKYVSSAKVEKNGFINIFFSPE 92 Query: 97 YLRKILSSIVVSGIEYGRNLIGKGTKVN----IEFVSANPTGPMHVGHCRCAVVGDTLAS 152 + S I+ R I + +N +E VSANPTG +H+GH R + DTLA+ Sbjct: 93 IFSEYYSEILEK-----REDIWRKHPINSWYFVEIVSANPTGLLHIGHARNGIFSDTLAN 147 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 L+ + GY V REY +N+ G QI L S++ +Y+ L + +P V +K+ GKE Sbjct: 148 LLEYGGYFVHREYLVNNLGNQIKELLESIWIKYKAKL----TSIPRESNTKV-VKYNGKE 202 Query: 213 LADKYSSELLNFPEEKWL-----------PIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 + D+ L++ ++W+ P ++ V + I DL NI+ + + Sbjct: 203 I-DECVDYLISTHGQRWIFDRNIFESKSYPELEKLVVSYFLNEIEKDLARYNIEVNAWKF 261 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E F + I D+ ++ V +G + + C D Sbjct: 262 ESSF--VNDESINDLFKSMKEYLRVKDGAIWFKAGEILDGCK-----------------D 302 Query: 322 RPLLKSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L+K+DG +TY+ DL Y +K +I ++GSDH G++ +L+A Sbjct: 303 EVLIKNDGKHTYYCQDLIYHLYKLSLLGNEGKIINILGSDHYGHIDKLKAFLKLKEVDDD 362 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439 +++ + +LV+L +K+SKR I LR +++ + + R+ ++ + L+ D Sbjct: 363 RVHFICMQLVKLMEHSTLVKISKRDSKVIYLRDLMNYMTYEEARWFLVSQHPDSPLEIDI 422 Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 ++K+++ NP FYV YAY+R I R+ + P D + + + ++ D E ++ Sbjct: 423 QRLKQKNYNNPAFYVMYAYSRIFQILRKHGE--P----DFYSKKEVLFKTITDGIEKTIM 476 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 L ++ VI A +PY++ YL+ LA FH + E +L + + + R Sbjct: 477 NTLMQWDEVIHEAIETLQPYRITQYLFKLAKEFHSFY----EETKL-LQEGHEEEWLRDR 531 Query: 560 LQLVHAVASIINSGLNIIGVE 580 L L++A I+SGL+I+ ++ Sbjct: 532 LALLNAAKYTIHSGLSILKIK 552 >gi|294666099|ref|ZP_06731357.1| arginyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604113|gb|EFF47506.1| arginyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 354 Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 115/358 (32%), Positives = 184/358 (51%), Gaps = 30/358 (8%) Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 L ++ ++V + DL A + DI+ E ++ + + + L G+ YE Sbjct: 25 LEAIRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK--DGKVEEAVQKLIASGHTYE- 81 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349 + L +ST GDD DR + KSDG+YTYF D+AY K++RG+ Sbjct: 82 ---------------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGY 126 Query: 350 DNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407 + I +G+DH G + R+ A A + + +L ++V + R G +K+SKRAG + Sbjct: 127 ERAITELGADHHGSLTRVRAGLQAMELGIPQGWPEYVLHQMVTVMRGGEEVKLSKRAGSY 186 Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467 +TLR +++E +D+VR+ ++ RK L FD + QS +NPVFYVQYA+AR S+ RQ Sbjct: 187 VTLRDLIEETSADAVRWFLIARKPDSQLTFDIDLARAQSNDNPVFYVQYAHARVCSVLRQ 246 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 A++ D + D L +++ L+ YP V+E A A EPY++A YL + Sbjct: 247 AQEKGYKYD---QAHGLAELACLDDEHSLAVMLELSRYPEVVEIAGQALEPYQIAQYLRE 303 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA FH W H N ++ A R +L L A ++ +GL ++GV +P +M Sbjct: 304 LAHAFHT-WYH---NSKVLVDAAAERD---AKLTLAVATQQVLANGLELLGVSAPEKM 354 >gi|253315750|ref|ZP_04838963.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. CF-Marseille] Length = 343 Score = 183 bits (464), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 117/379 (30%), Positives = 194/379 (51%), Gaps = 40/379 (10%) Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K+LA+K+ E+ ++ EE L + V+ M +++DL N D + SE + + Sbjct: 1 KDLAEKHP-EIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLY--EK 57 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I +++ + GY YE R+T DD DR L+K+DG+ Sbjct: 58 GEILEVLAKMKELGYTYEA----------------DGATWLRTTDFKDDKDRVLIKNDGT 101 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTYF D+AY K +RG D +I + G+DH GY+ RL+A ++ + + ++VR Sbjct: 102 YTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVR 161 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L +G +KMSKR G+ ITLR ++DEVG D+ R+ + R DFD KEQS++NP Sbjct: 162 LMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNP 221 Query: 451 VFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 V+Y QYA+AR SI +QAK ++ DF I E ++L+ +A++ Sbjct: 222 VYYAQYAHARICSILKQAKEQGIEVTAANDF-----TTITNE-----KAIELLKKVADFE 271 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 IE+A + +++ Y+ DLA+ FH ++ + V ++ + T + ++ AV Sbjct: 272 PTIESAAEHRSAHRITNYIQDLAAHFHKFYNAEK-------VLTDDIEKTKAHVAMIEAV 324 Query: 567 ASIINSGLNIIGVESPNEM 585 + + L ++GV +P M Sbjct: 325 RITLKNALAMVGVSAPESM 343 >gi|20094195|ref|NP_614042.1| arginyl-tRNA synthetase [Methanopyrus kandleri AV19] gi|23822192|sp|Q8TXB6|SYR_METKA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|19887217|gb|AAM01972.1| Arginyl-tRNA synthetase [Methanopyrus kandleri AV19] Length = 592 Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 164/591 (27%), Positives = 261/591 (44%), Gaps = 99/591 (16%) Query: 45 LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV--DSVFIAGKGFINLYLSPS-YLRKI 101 L+T A+ L++ L +P +AE IV +D V + ++ G GFINL L S Y Sbjct: 51 LATPVALSLAKELDENPRELAETIVEESDLDDVVFVEKAWVEGPGFINLKLDRSQYAALT 110 Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161 L SI G EYG +G G V +E SANP GP+H+GH R AV+GD LA M F+ Y V Sbjct: 111 LRSIFYYGEEYGSLDLGMGRPVILEHTSANPNGPLHIGHGRNAVIGDILARCMVFTNYGV 170 Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY---- 217 +YY+ND G QI LA W+Y + ++PEG P + + E A + Sbjct: 171 EVQYYVNDMGKQIAMLA----WKY---IKEGRPEVPEGEKPDEFFGKLYTEAAREIEEDP 223 Query: 218 -----------SSELLNFPEEKWLPIVKDYSVQAMMKIIR---DDLKALNIQHDIFISED 263 S E EE + D + + +R L+ L + HD F+ E Sbjct: 224 ELEEVVERFLRSYERYLVEEESRAERIADAFQTVVEECLRGHIQTLERLRVAHDRFVYES 283 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323 +F R +I++ L G E + D++ G D + Sbjct: 284 EFARD----ALEIVEKLLDMGVAEE------REDGAVVVDLED---------YGIDKELV 324 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383 L +SDG+ Y D+AY K R ++ V+G+DH V++L AV + E +I+V Sbjct: 325 LTRSDGTTLYTTRDIAYHLWKLGRA-TFVVDVLGADHKLAVEQLRAVLDMLEENPDRIDV 383 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITL-----------------------------RHVV 414 + E + L MS R G ++TL + Sbjct: 384 VFYEFIHLPEGS----MSTRKGRYVTLDEFLEEAKKRALEKMKAAGVAEELSDEEREKIA 439 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 +E+ +VRF + ++ ++FD+ + + + P ++QYAYAR +SI R+A D Sbjct: 440 EEIAIGAVRFAIARVSPNKPIEFDWDEALDFRRGGP--FIQYAYARAKSILRKA-----D 492 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 + + F + + F +LI+ ++++PR + + P LA Y YDLA FH Sbjct: 493 EEVNRFDAAYLNDDHSF-----ELILKMSKFPRHVAQCVRKRRPDILAEYAYDLAKTFHT 547 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + E P L + ++ RL+LV A + + +N++G+ + M Sbjct: 548 FYE---EVPVL---HVEDDEVREARLKLVEAFTIVAENLMNLLGIPTLERM 592 >gi|58699629|ref|ZP_00374318.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila ananassae] gi|58533852|gb|EAL58162.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila ananassae] Length = 194 Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 94/204 (46%), Positives = 127/204 (62%), Gaps = 10/204 (4%) Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 V L +V + +G P+KMSKR+G+F+T R VV+EVG D RF+ML RKN +LDFDF KV Sbjct: 1 VKLHNIVNFFENGKPVKMSKRSGNFLTARDVVEEVGRDITRFIMLTRKNDMVLDFDFAKV 60 Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 KEQSK+NP+FYVQYA+AR S+ R A P D L EL LI L Sbjct: 61 KEQSKDNPIFYVQYAHARAHSLMRNAPKELPTADPSLLRTG----------GELFLIKTL 110 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 A++P V+E A EP+++ FYL ++A FH W +G+ + +RF+ +N LT R+ L Sbjct: 111 AKWPDVVEIAARLCEPHRITFYLLEVAEAFHVLWGYGKSDLNMRFILEDNLNLTAARMFL 170 Query: 563 VHAVASIINSGLNIIGVESPNEMS 586 V A+A +I SGL+I +E EMS Sbjct: 171 VQALAHVIASGLSIFNIEPLKEMS 194 >gi|322380143|ref|ZP_08054391.1| arginyl-tRNA synthetase [Helicobacter suis HS5] gi|321147448|gb|EFX42100.1| arginyl-tRNA synthetase [Helicobacter suis HS5] Length = 340 Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 111/353 (31%), Positives = 184/353 (52%), Gaps = 27/353 (7%) Query: 21 KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80 K +E+ + +++E P+D + GH ++ A L++ P IA +V R+ D + + Sbjct: 6 KTLLERVLQTEVILEHPKDRSLGHYASVVAFPLAKVYKKPPKIIALELVDRLLEDEECQA 65 Query: 81 VFI---AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMH 137 VF A G+IN L S+L + + + G+++G+ K + +EFVSANPTGP+H Sbjct: 66 VFAKIEALNGYINFTLKESFLDRFCNQALKLGVDFGKE-ADKNESLYLEFVSANPTGPLH 124 Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP 197 +GH R A+ GD+ +L F GY V EYY+ND GAQI L LS+ W + + + P Sbjct: 125 IGHARGAIFGDSFGNLARFLGYRVHTEYYVNDLGAQIKLLGLSL-WLAICEMQHLKVEYP 183 Query: 198 EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257 YY G Y+ + ++ + + LN + + D++ + ++ I L L I + Sbjct: 184 TEYYRGAYINELAQKALEHFPD--LNNNDPNLYATLGDFAKEVVLAQIEQSLADLGIVIE 241 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 + SE R + ++ L + G VYE + K+ L +S+M G Sbjct: 242 NYASE----RAMFAHQEEVFKRLEQAGGVYE---------------FEGKRWL-KSSMFG 281 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 D+ DR + K+DG +TY A D+ Y K+++GFD+ I + G+DH GYV R++A Sbjct: 282 DEKDRVIRKNDGDFTYIAGDITYHDYKFKQGFDHYINIFGADHHGYVARIKAA 334 >gi|295400646|ref|ZP_06810623.1| Arginine--tRNA ligase [Geobacillus thermoglucosidasius C56-YS93] gi|294977227|gb|EFG52828.1| Arginine--tRNA ligase [Geobacillus thermoglucosidasius C56-YS93] Length = 254 Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 98/242 (40%), Positives = 147/242 (60%), Gaps = 5/242 (2%) Query: 1 MYLFADFSSRLKNYLKE--IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58 M + R+K +K + + E+++ D +++E PR+ AHG STN AM L+R Sbjct: 1 MNIVEQMKERMKEEIKRAVVSAGLAKEEEVPD-VILEVPREKAHGDYSTNMAMQLARIAK 59 Query: 59 LDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117 P IAE IV + V + IAG GFIN Y+ YL +++ I+ +G YG + Sbjct: 60 KPPRAIAEEIVKHFDQTKVSVKKIDIAGPGFINFYMDNRYLTELIPMIIEAGASYGETNV 119 Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 GKG KV +EFVSANPTG +H+GH R A VGD+L +++ +G++VTREYYINDAG QI L Sbjct: 120 GKGQKVQVEFVSANPTGDLHLGHARGAAVGDSLCNILEKAGFDVTREYYINDAGNQIYNL 179 Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237 A SV RY QAL D ++PE Y G + +GK+LA+++ + ++ E++ L ++Y Sbjct: 180 AKSVEARYFQAL-GIDKEMPEDGYYGDDIIEIGKKLAEEHGDKYVHMDEQERLAFFREYG 238 Query: 238 VQ 239 ++ Sbjct: 239 LR 240 >gi|58697671|ref|ZP_00372842.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila simulans] gi|58535824|gb|EAL59640.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila simulans] Length = 221 Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 99/222 (44%), Positives = 137/222 (61%), Gaps = 2/222 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +F SS + + L E+ + + + IV E P + AHG + TN AM+L++ + Sbjct: 1 MNIFKRASSLILSKLNELKQRGIINTDTTNFIV-EPPSNRAHGDIYTNVAMVLAKHEKKN 59 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P+ IAE++ ++ +V V IAG GFIN++L IL I E+G IG Sbjct: 60 PIEIAEVLAKEFELFDEVAKVEIAGPGFINIHLKIKVWHGILKQINELKTEFGTLDIGNN 119 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +N+EFVSANPTGP+H+GH R AV GD LA+L+ GY+VT+EYYINDAGAQI+TL S Sbjct: 120 QAINVEFVSANPTGPLHIGHARGAVFGDVLANLLKKVGYKVTKEYYINDAGAQIDTLIKS 179 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222 V+ RY++AL S + +G YPG YLK +G+ LA KY E L Sbjct: 180 VYLRYKEALGEKIS-IEKGLYPGEYLKPIGEGLAKKYGKEFL 220 >gi|205375416|ref|ZP_03228205.1| arginyl-tRNA synthetase [Bacillus coahuilensis m4-4] Length = 250 Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 94/250 (37%), Positives = 151/250 (60%), Gaps = 5/250 (2%) Query: 1 MYLFADFSSRLKNYLKE--IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58 M + S+LK +K+ I + E++I D +++E P++ AHG STN AM L+R Sbjct: 1 MNIVDQVQSKLKEEIKQAVIKAGLATEEQIPD-VILETPKEKAHGDYSTNMAMQLARVAK 59 Query: 59 LDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117 P IAE + A + ++ + IAG GFIN Y+ SYL ++ ++ +G YG + Sbjct: 60 KAPRMIAEELTANFDRTKASIEKIEIAGPGFINFYMDNSYLTDLIPVVLKAGEAYGESDA 119 Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 G+G K+N+EFVSANPTG +H+GH R A VGD+L +++ +G+ VTREYYINDAG QI+ L Sbjct: 120 GEGQKINVEFVSANPTGDLHLGHARGAAVGDSLCNILDKAGFAVTREYYINDAGNQIHNL 179 Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237 A+SV RY QAL + +PE Y G + + K+L D++ + + E++ + Y Sbjct: 180 AMSVEARYFQAL-GQEKPMPEDGYHGADIIGIAKQLVDEFGDKYVEVDEKERYDFFRSYG 238 Query: 238 VQAMMKIIRD 247 ++ ++ +++ Sbjct: 239 LKYELEKLKE 248 >gi|11498499|ref|NP_069727.1| arginyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304] gi|3334362|sp|O29368|SYR_ARCFU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|2649707|gb|AAB90346.1| arginyl-tRNA synthetase (argS) [Archaeoglobus fulgidus DSM 4304] Length = 549 Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 150/579 (25%), Positives = 262/579 (45%), Gaps = 83/579 (14%) Query: 38 RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 R+ H L++ A L++ P IA+ IV ++++ + + G+IN + S + Sbjct: 23 RESEHADLASTIAFKLAKERKKSPKEIADEIVENLEVESEYIGSVESVNGYINFFASYEF 82 Query: 98 LRKILSSIVVSGIEYGR-NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 L ++ I+ YG NL G+ + IE SANP GP+H+GH R +++GDT+A + A Sbjct: 83 LEDTVNVILDEDENYGHLNLKGE---ILIEHTSANPDGPLHIGHIRNSIIGDTIARIFAK 139 Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216 +G++V YY+ND G Q L + ++ D + E Y L EL ++ Sbjct: 140 AGFDVKTHYYVNDMGRQTAITVLGI-EKFGLKDKKPDHAVAEAYIEANKLLESNPELEEQ 198 Query: 217 YSSELLNFPEEKWLPIVK-DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275 +L + E + K +V+ ++ I+ LK +N++HD F+ E +F Sbjct: 199 VEKLMLAYEEGDEKTVEKFRRAVETALEGIKQTLKTINVEHDEFVWESEF---------- 248 Query: 276 IIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333 R GYV + GIL ++ + +K + + G D + L + +G+ Y Sbjct: 249 -----VRNGYVGKVLGIL--------EERGLVKKNGAWTIELEGFDKEVVLRRENGTTLY 295 Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393 DLAY K E ++ I V+G+DH Y +L + + K +I + E V L Sbjct: 296 ITRDLAYHMWKNE-NYERFINVLGADHKLYGAQLSKILELLGLKPPEI--IFFEFVSLPE 352 Query: 394 DGMPIKMSKRAGDFITL-------------------------RHVVDEVGSDSVRFMMLW 428 MS R G FI+ R + D V ++RF + Sbjct: 353 GS----MSTRRGKFISADELISKVRDEAWKILSERDMEEDEKRKIADAVAVGAIRFDFIK 408 Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQ 487 + + FD+ K + ++ Y+QY++AR SI R+A +D P+L+F Sbjct: 409 IAPEKHMTFDWSKALDFERQTAS-YIQYSHARACSILRKAVEDGMPELEF---------- 457 Query: 488 ESEFDTS-ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 + E T+ E +L++ L++ P V++ P A YL +A F+ + R++P L+ Sbjct: 458 KGELCTAGERKLVMLLSKMPYVVKRIVSELRPNVFAEYLLSVAGTFNDFY---RDHPVLK 514 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ M RL +V A ++ +GL ++G+E M Sbjct: 515 ----AESEVRMHRLAIVDATRVVLRNGLELLGIEPLERM 549 >gi|312136309|ref|YP_004003646.1| arginyl-tRNA synthetase [Methanothermus fervidus DSM 2088] gi|311224028|gb|ADP76884.1| arginyl-tRNA synthetase [Methanothermus fervidus DSM 2088] Length = 558 Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 155/591 (26%), Positives = 273/591 (46%), Gaps = 94/591 (15%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E P G LSTN + L+ LG++P+ IA IV ++ + V G +IN Sbjct: 25 INLEEPPSKDLGDLSTNLSFKLASDLGMNPVDIANNIVNAMETPKYISKVETKG-PYINF 83 Query: 92 YL-----SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++ +P L+KI + YG NL K KV +E SANP GP+HVGH R A++ Sbjct: 84 FIDYDAFAPKLLKKIDEN-------YG-NLKSKNKKVILEHTSANPNGPLHVGHLRNAII 135 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVY 205 GD+LA +M +GY+V YY+ND G Q+ + +++ D ++ + YY Sbjct: 136 GDSLARIMRAAGYDVETHYYVNDMGRQVAMVVWGALNLEFKKEKVKKDHEIGKIYYLANK 195 Query: 206 LKHVGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 ++ ++ + + + E +K I K+ V+ ++ I++ LK LNI+HD F+ E Sbjct: 196 ALENDPKIENEVNKLMKKYEEGDKKTRKIFKNI-VKKCLEGIKETLKNLNIEHDKFVWES 254 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323 DF R S I II+ L Y YE + G + + Sbjct: 255 DFVRD--SSIEKIIEKLKNTEYFYES----------------EGAICLNLEKFGIEKELI 296 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383 L +SDG+ Y D+AY K + D +I V+GSDH ++++ V + K+ +I Sbjct: 297 LKRSDGTSLYATRDIAYHFMKSQNA-DIVIDVLGSDHKLTAEQVKTVMKILKSKQPEI-- 353 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN---------SEL 434 + E + L M S R G F+++ +++E ++ + RK+ +E+ Sbjct: 354 IFYEFITLPNGSM----STRKGTFVSVDELIEESKKRAIEEIKKRRKDISESEMEKIAEI 409 Query: 435 LDFDFCK--VKEQSKENPVFY--------------VQYAYARCRSIFRQAKDIFPDLDFD 478 + + + + S E + + +QYA+AR + ++AK + + D Sbjct: 410 VSIGAIRYYIAKLSPEKHLTFKWEDVLDFEKGCASIQYAHARACKLLKKAKYKEKEYEID 469 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 +P N + E+ LI L+++P+++E A ++ + A Y +LA+ F+ + H Sbjct: 470 KWPLNDL---------EIDLIRILSKFPKIVETAAKTRKIHMAAQYAQELANAFNRFYKH 520 Query: 539 ----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G E+ + R V K+T IN+ L ++G+++P+ M Sbjct: 521 VPVIGSEHEKNRLVLVEKCKIT-------------INNCLKLLGIKAPSSM 558 >gi|288932335|ref|YP_003436395.1| arginyl-tRNA synthetase [Ferroglobus placidus DSM 10642] gi|288894583|gb|ADC66120.1| arginyl-tRNA synthetase [Ferroglobus placidus DSM 10642] Length = 547 Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 156/574 (27%), Positives = 262/574 (45%), Gaps = 73/574 (12%) Query: 38 RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD--VDSVFIAGKGFINLYLSP 95 R+ LST A +++ P +AE +V+ I+ + + SV + G+IN +++ Sbjct: 21 RESEFADLSTTIAFKIAKERKEPPQKVAEELVSEIEFERSTYIGSVEVVN-GYINFFVNE 79 Query: 96 SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155 +L + I+ YG + G +V IE SANP GP+HVGH R A++GDTLA +M Sbjct: 80 EFLSDTVERILDEDENYGS--LNLGGEVLIEHTSANPDGPLHVGHLRNAIIGDTLARMME 137 Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215 +G VT YY+ND G QI L + +Y + D + E Y EL Sbjct: 138 KAGMRVTTHYYVNDMGRQIAAAVLG-YLKYGLSEKKPDHAVAEAYIRINRDIEENPELEK 196 Query: 216 KYSSELLNFPE-EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274 + +L F ++ + + V ++ I++ L+ +I HD FI E DF Sbjct: 197 EVDELMLKFERGDEEISEKFRFVVDKALEGIKETLEKFDIHHDDFIYESDF--------- 247 Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334 R GYV E IL + K + D D ++ + + +V L + +G+ Y Sbjct: 248 ------VRNGYV-ERILRMLEEKGLLEKD-DVWKVDLKDYGIEKEV--ILRRENGTTLYI 297 Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394 DLAY K E F+ I V+G+DH Y ++L + + K + VL E V L Sbjct: 298 TRDLAYHLWKNE-NFERFINVLGADHKLYSEQLSKILELLGLKPPE--VLFFEFVSLPEG 354 Query: 395 GMPIKMSKRAGDFITL-----------------RHVVDE-----VGSDSVRFMMLWRKNS 432 MS R G F++ R VDE V ++R+ + Sbjct: 355 S----MSTRKGKFVSADELLEKTFEEAKKILRERGSVDERIAKIVAVGAIRYDFVKVSPE 410 Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPRNVIPQESEF 491 + FD+ K + ++ Y+QY++AR SI R+A + +L+FD P + +E E Sbjct: 411 KPFTFDWSKALDFERQTAS-YIQYSHARACSILRKAVEAGRTELEFD--PAIITKKERE- 466 Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551 L++ L+++ +E A +P A YL +A+ F+ ++ + V + Sbjct: 467 ------LVMRLSKFSFYLEKAVNELKPSVFAEYLMSVANAFNDFYTDHQ-------VLVD 513 Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++++ M RL +V A ++ +GL ++G+E+P M Sbjct: 514 DKRIRMHRLAIVDATRIVLRNGLELLGIEAPERM 547 >gi|307610759|emb|CBX00370.1| arginine tRNA synthetase [Legionella pneumophila 130b] Length = 306 Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 91/268 (33%), Positives = 145/268 (54%), Gaps = 41/268 (15%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 I +E +D AHG +TN A++L++P P +AE +VA I DP V+ + IAG GFIN Sbjct: 29 EIKVENAKDPAHGDYATNLALVLAKPCRQAPKVLAERLVAVIPADPSVEKIEIAGAGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 ++ + I+S I+ G E+G+ +G+ KV IEFVSANPTGP+HVGH R A G TL Sbjct: 89 FFMRSTARSLIISEILNKGKEFGQGNLGQSQKVLIEFVSANPTGPLHVGHGRGAAFGATL 148 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +++ +GY+VT EYY+NDAG Q+N LA+SV+ RY + L P Y G Y+ + Sbjct: 149 GNVLKAAGYDVTLEYYVNDAGRQMNILAVSVWLRYLE-LAGEPIAFPANGYKGQYVYEIA 207 Query: 211 KELADKYSSELLNFPEEKWLPIVKD----------------------------------- 235 +E+ + ++ ++ W+ +V + Sbjct: 208 QEMWSEQGNQFVH----PWISVVDNLPADEPEGGDKETYIDAIIARAQSLLGKDGFANFH 263 Query: 236 -YSVQAMMKIIRDDLKALNIQHDIFISE 262 ++++ ++ I+DDL+A ++ D + SE Sbjct: 264 QHALKTVLDDIKDDLQAFGVRFDSWFSE 291 >gi|52549705|gb|AAU83554.1| arginyl-tRNA synthetase [uncultured archaeon GZfos31B6] Length = 559 Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 166/621 (26%), Positives = 275/621 (44%), Gaps = 100/621 (16%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 +F F S +++ LK+ + +D + IE + A+ L+++ + L+ P Sbjct: 1 MFLKFKSEVESVLKK---ALDASGYQIDDLHIE---ESAYSDLASSLSFRLASEYRQSPA 54 Query: 63 TIAELIVARIKIDPD--VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 IA++I I I D V V G +IN ++S +L + I YG GKG Sbjct: 55 AIADVIADVIAIPKDSLVGEVQAVG-AYINFFVSKKFLEDTMHEIFEKKERYGTGN-GKG 112 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KV IE SANP GP+HVGH R +++GDTLA ++ +GY+V +YY+ND G Q+ +A Sbjct: 113 -KVIIEHTSANPNGPLHVGHIRNSIIGDTLARILKTAGYDVEIQYYVNDMGRQVAIVA-- 169 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-----KYSSELLNFPEEKWLPIVKD 235 W + ++ VY++ +EL + + EL+ E +++ Sbjct: 170 --WAMDRFEFDGQKKADHA-IADVYIR-ANQELGEDPDLVRQIDELMQRIEHGDAEMIER 225 Query: 236 YSVQAMMKI--IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY--VYEGIL 291 +S + + I LK +N+ HD+F+ E F +G + D++ L G + +G L Sbjct: 226 FSSATDLAVSGITSTLKRMNVHHDLFVHESMFVKG--GEVSDLVRELKELGLTEIADGAL 283 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351 P M D D +L+SD + Y DLAY + K E+ D Sbjct: 284 MVP--------------------MPTFDKDLVILRSDQTSVYVTRDLAYHRWKAEQ-CDR 322 Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL- 410 MI V+G+DH +L V +A K+ +I ++ E V L MS RAG FI+ Sbjct: 323 MIDVLGADHKLISSQLCYVLSACGVKEPEI--VIFEFVSLPEGS----MSTRAGKFISAD 376 Query: 411 --------------------------RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 HV EVG +VR+ ++ + FD+ + Sbjct: 377 ELLDEVEKQALTEVTKRRPDAEEDFRDHVAKEVGIGAVRYDIVKVSPEKATTFDWESALD 436 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 K F +QY++AR SI ++A+ I P ++ P D +E+ + LA Sbjct: 437 FDKLGAPF-IQYSHARACSILKKAQHI---------PESIDPAMLSED-AEISFVKELAR 485 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 + VI+ A+ +P+ +A Y +LA F+ + RL V + + R+ LV Sbjct: 486 FSYVIDLASRELKPHIVAIYARELAEAFNQFY-------RLSPVLSAPDDVRDARIGLVE 538 Query: 565 AVASIINSGLNIIGVESPNEM 585 ++ S L ++G+ +P M Sbjct: 539 CARIVLASTLGVLGIAAPESM 559 >gi|307352773|ref|YP_003893824.1| arginyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571] gi|307156006|gb|ADN35386.1| arginyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571] Length = 554 Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 154/579 (26%), Positives = 265/579 (45%), Gaps = 89/579 (15%) Query: 42 HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG-FINLYLSPSYLRK 100 H L++ A L++ ++P +A I +++K + + + KG +IN YL + Sbjct: 30 HADLASTVAFSLAKSRRMNPAALASEIASQVKDELSGKGIGVEVKGPYINFIFGKKYLEE 89 Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 ++ + G YG +L K ++ +E SANP GP+HVGH R +V+GDTL+ ++ +GY Sbjct: 90 VIVEALKEG--YG-SLPQKPGRICLEHTSANPNGPLHVGHIRNSVIGDTLSRVLRKAGYT 146 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQ-ALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 + EYY+ND G QI ++ W + L N+ + + Y VY+ AD+ Sbjct: 147 LEVEYYVNDMGRQIAIVS----WGFDNIGLAQNEGEKDDHYVARVYVAANRAIEADESIK 202 Query: 220 ELLN----FPEEKWLPIVKDYSVQAMMKI--IRDDLKALNIQHDIFISEDDFHRGDPSPI 273 E ++ E +V+ + +M + I++ L LN++H+ FI E DF R + Sbjct: 203 EEIDRRMALIENGDPEMVRKFRDAVLMCVGGIKETLLDLNVKHNRFIFESDFVRN--GLM 260 Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333 +++ L LP K + D+ T G + + L +SDG+ Y Sbjct: 261 MNVLHRLE--------ALPEAKHEGVLSLDL---------TEFGFEKEYVLRRSDGTSVY 303 Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393 A DLAY + K + F+ +I V+G+DH ++L+A + +K +I + E V L Sbjct: 304 AARDLAYHEWKSD-NFERIINVLGADHKLIGRQLQATMQLLGDKVPEI--VFFEFVSLPE 360 Query: 394 DGMPIKMSKRAGDFIT----LRHVVDE-----------------------VGSDSVRFMM 426 MS RAG FI+ L HV ++ V + ++RF + Sbjct: 361 G----SMSTRAGKFISTDELLEHVFEKALEEVETRRPELSADEKSSIARSVATGAIRFDI 416 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 + + FD+ + + K++ Y+QYA+AR SI +A + Sbjct: 417 VRVSPDKATVFDWKEALDFEKQSAP-YIQYAHARACSILEKAGEF----------EESFS 465 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 ESE+ E+ L H+A +P+VI + P+ LA Y +LA +F+ + R +P L+ Sbjct: 466 AESEY---EVALAKHIALFPKVIADVAGDLRPHVLAIYARELADLFNTFY---RFDPVLK 519 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L RL LV A + + L +G+++ M Sbjct: 520 ----AEGDLRNSRLTLVKAAQNTLKEALETLGIDAVRSM 554 >gi|284161225|ref|YP_003399848.1| arginyl-tRNA synthetase [Archaeoglobus profundus DSM 5631] gi|284011222|gb|ADB57175.1| arginyl-tRNA synthetase [Archaeoglobus profundus DSM 5631] Length = 548 Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 155/580 (26%), Positives = 268/580 (46%), Gaps = 87/580 (15%) Query: 38 RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 ++ H L+ A L++ +P+ +A I ++ + + + G+IN + S + Sbjct: 24 KESDHADLACTIAFKLAKEQKRNPIEVANEIAENLEPIGYIGKIEVVN-GYINFFASEEF 82 Query: 98 LRKILSSIVVSGIEYGR-NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 L +++I+ + YG N+ GK V IE SANP GP+H+GH R +++GD+LA + Sbjct: 83 LEDTINTILDTDENYGSLNMRGK---VLIEHTSANPDGPIHIGHMRNSIIGDSLARIFRK 139 Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK---HVGKEL 213 +G++VT YY+ND G QI A++V L ++S P+ Y+K + K Sbjct: 140 AGFDVTTHYYVNDMGRQI---AIAVLGYRLFGL--DESKKPDHAVVEAYVKANQEIEKNP 194 Query: 214 ADKYSSELLNFPEEKWL-PIVKD--YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 + E+L E + +V D Y V ++ IR L+ LNI HD ++ E +F + Sbjct: 195 ELEKEVEMLMIKYENFSDDVVGDFRYIVSKALEGIRQTLRELNIHHDDYVWESEFLKN-- 252 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + I+ L + + K + ++D K ++ R + +G+ Sbjct: 253 GYVDRILSMLDERNLI--------KKEGAWFVELDEKPVILR-------------RENGT 291 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 Y DLAY K E F+ + V+G+DH Y ++L + ++ K +I + E V Sbjct: 292 TLYITRDLAYHLWKNE-NFERFVNVLGADHKLYGRQLCKLLELINLKPPEI--VFFEFVS 348 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM---LWRKNSE---------LLDFD 438 L MS R G FI+ ++ +V ++ + + L R+ E + FD Sbjct: 349 LPEGS----MSTRKGKFISADELIAKVYDEARKIVEKRDLSREEKERIAKAVAMGAIRFD 404 Query: 439 FCKVKEQS------------KENPVFYVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVI 485 F K+ + + YVQYA+ARC SI R+A + PDL+F R I Sbjct: 405 FVKIAPEKPMVFDWEKALDFERQTASYVQYAHARCCSILRKAVESGMPDLEF----RPEI 460 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 + E D L++ L+++P VIE +P +A YL +A+ F+ + R Sbjct: 461 CTKVERD-----LVMILSKFPYVIEKVIKDLKPNYVAEYLLSVANTFNDFYREHR----- 510 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V ++ M RL +V AV ++ +GL ++G+E+ M Sbjct: 511 --VLDEVAEIRMHRLAIVDAVRIVLRNGLELLGIEALERM 548 >gi|296109097|ref|YP_003616046.1| arginyl-tRNA synthetase [Methanocaldococcus infernus ME] gi|295433911|gb|ADG13082.1| arginyl-tRNA synthetase [Methanocaldococcus infernus ME] Length = 552 Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 172/616 (27%), Positives = 278/616 (45%), Gaps = 109/616 (17%) Query: 15 LKEIDCKIKVEKKILDR------IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68 +KEI K +V+KKIL++ + ++ P G S N A L++ L +P IAE + Sbjct: 1 MKEI-IKEEVKKKILEKFNVDIEVNVDEPPKIEMGDFSVNVAFRLAKELKRNPKEIAEEL 59 Query: 69 VARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127 V +K++ V + + G+IN YL Y R+++ I+ +YGR K K+ +E Sbjct: 60 VKDLKVE-GVKEIKVVN-GYINFYLDYEIYGRQVIGEILEKKSDYGRG--EKKEKIILEH 115 Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187 SANP GP+H+GH R A++GD L ++ F GYEV YY+ND G Q +AL V+ + Sbjct: 116 TSANPNGPLHIGHLRNAIIGDCLKRILEFYGYEVETHYYVNDMGRQ---MALVVYGIEKF 172 Query: 188 AL---YNNDSDLPEGYYP-GVYLKHVG------KELADKYSSELLNFPEEKWLPIVKDYS 237 L D + E Y YL+ EL Y E L EE + +++ Sbjct: 173 GLDKEKKKDHAIAEVYVKINKYLEEHKEEEEKISELMKLY-EESLEKNEENEITKKFEFA 231 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 V ++ I++ LK L+I+HD F+ E + R ++++I L G V I Sbjct: 232 VNYALEGIKETLKNLDIEHDKFVWESSYVRN--GLVKEVIKRLMETGKV---IKEDTYLL 286 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 + + +++K +L R S+G+ Y D+AY K R D +I V+G Sbjct: 287 SLEDFGIEKKMVLAR--------------SNGTSLYSTRDIAYHLDKL-RNADIVIDVLG 331 Query: 358 SDHSGYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 +DH + ++A + EK+ +I + E + L MS R G FI+ +++E Sbjct: 332 ADHKLTAEMVKAALKLLGCEKEPEI--VFYEFISLPEGS----MSTRKGRFISADELLEE 385 Query: 417 -------------------VGSDSVRFMM--------LWRKNSELLDFDFCKVKEQSKEN 449 + SVRF + L + E LDF+ Sbjct: 386 ALKRAKEECEKRNVSVERDIALGSVRFNIAKVSPEKPLIFRWEEALDFEKVGC------- 438 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 P+ +QYA+ R SI R+A D L+F + E +LI L ++ VI Sbjct: 439 PL--IQYAHVRASSILREAND-SESLNFSY----------NLEKEEKELIKMLDKFKEVI 485 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 + + + + LA YL +LA F+ + P L+ + RL LV A + Sbjct: 486 KESAEKRRVHILANYLIELAKKFNKFYEKC---PILK------SEYKRERLALVKATKIV 536 Query: 570 INSGLNIIGVESPNEM 585 I +GLN++G+++P M Sbjct: 537 IKNGLNLLGIKAPERM 552 >gi|294494696|ref|YP_003541189.1| arginyl-tRNA synthetase [Methanohalophilus mahii DSM 5219] gi|292665695|gb|ADE35544.1| arginyl-tRNA synthetase [Methanohalophilus mahii DSM 5219] Length = 567 Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 153/586 (26%), Positives = 264/586 (45%), Gaps = 84/586 (14%) Query: 37 PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD--VDSVFIAGKGFINLYLS 94 P H LST A L+ P+ +A IV I++ + ++S+ G +IN+ + Sbjct: 29 PEPSQHADLSTRVAFKLAAVARKSPVEVANQIVENIQLRENCLIESIGTTGP-YINIKAN 87 Query: 95 PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154 +Y+ + ++ ++G N K+ +E SANP GP+HVGH R +++GDTL ++ Sbjct: 88 RTYIDRTFETVRSKKEDFGGNFYS--GKILLEHTSANPNGPLHVGHIRNSIIGDTLTRIL 145 Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY-YPGVYLKHVGKEL 213 +GY+V +YY+ND G QI ++ W + + D DL + VY+K + Sbjct: 146 RKAGYDVDAQYYVNDMGRQIAIVS----WALEH--FEMDPDLKSDHAIANVYIKANARLE 199 Query: 214 AD----KYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 D +Y L+ E ++K D +V +K IR L +N+ HD F++E F R Sbjct: 200 EDSQKVEYIDNLMQRVESGDEEVIKRFDDAVDLAVKGIRSTLLRMNVHHDSFVNESGFVR 259 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 + DI+D + + G + D+D L+ + G + + + Sbjct: 260 S--GAVSDIVDKIRKTG----------------RVDVDDGALVVDLSDYGFEKTLVVQRR 301 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387 DG+ Y DLAY + K + D +I ++G+DH +L+A AV K+ +I ++ E Sbjct: 302 DGTSLYTTRDLAYHEWKTMQA-DRIIDILGADHKLISGQLKATLNAVGLKEPEI--VIFE 358 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420 V L MS R G FIT ++D+ VG Sbjct: 359 FVSLPEG----SMSTRRGQFITADELLDKVQARAFEEVEKRRPEMSPEFMEKVAGMVGIG 414 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +VR+ ++ + FD+ + K+ F +QY++AR SI ++A + ++ Sbjct: 415 AVRYDIIKVSPEKSTVFDWKAALDFEKQGGPF-IQYSHARASSILKKAG------EEGIW 467 Query: 481 PRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 P S D SE+ LI +A + +V++ A +P+ +A Y +LA F+ + Sbjct: 468 DPASKPNPSVLTDESEITLIKQIALFDKVLKQAADDLKPHIIAIYGRELADAFNQFY--- 524 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +P L A +L RL LV ++ + L +G+ +P M Sbjct: 525 RFSPVL---GAETEELRNARLGLVDCARIVLANVLETLGMGAPESM 567 >gi|325989821|ref|YP_004249520.1| Arginyl-tRNA synthetase [Mycoplasma suis KI3806] gi|323574906|emb|CBZ40566.1| Arginyl-tRNA synthetase [Mycoplasma suis] Length = 556 Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 147/590 (24%), Positives = 262/590 (44%), Gaps = 75/590 (12%) Query: 11 LKNYLKEIDCKIKVEKK----ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 LKN LK K+ +E K +LD++ +E ++ G STN ++S + Sbjct: 5 LKNQLKASLRKV-LENKGFSLLLDKVELEETKNSKFGFFSTNLPFLISSAYKKSIEESEQ 63 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSG--IEYGRNLIGKGTKVN 124 ++++ + + V A +G++N ++SP + S + I N K K Sbjct: 64 ILISSFPKNELIQKV-EAVQGYLNFFISPDLIENFFRSSLKRRKIISRANNEENKKDKYF 122 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV--F 182 +E VSANPTG +H+GH R V+ DT+++L+ ++ V R Y INDAG QI L S+ F Sbjct: 123 VEIVSANPTGILHIGHIRNGVITDTISNLLEYNNNSVFRTYLINDAGTQIEELLRSIHNF 182 Query: 183 WRYQQALYNNDSDLPEG--YYPGVYLKHVGKELADK--YSSELLNFPEEKWLPIVKDYSV 238 + + S E Y G +K + ++ K Y+ EL +++ +K ++V Sbjct: 183 YSFTSRGGVGISLTEESNVKYTGSEIKECAEAISQKFGYNWEL---TDKELTHQIKLFAV 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + I+ +LK+L+IQ D + E S + ++I L + ++Y Sbjct: 240 EFFLDKIKKELKSLSIQVDSWDYESRI--CSESALTNLIKKL--EDFIY----------- 284 Query: 299 TQKCDMDRKQLLFRST--MVGDDVDRPLLKSDGSYTYFAADLAYF--KCKYERGFDNMIY 354 + L F+++ + G + D L+KSDG +YF DL Y K ++ ++ Sbjct: 285 -----LKDNALWFKTSAFLEGYEKDDVLVKSDGKISYFGQDLIYHLHKLEFLGKTGTIVN 339 Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414 + DH G++ R++A ++ + + + L RL +G I SKR F++ + Sbjct: 340 TLAEDHKGHIDRMKAFFYSIGVPQDSVKYKITRLSRLIMEGKKIVFSKRENIFLSAEELK 399 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI-------FRQ 467 + + D +R+ + R LD D K+K + N +FY+ YAY+R I + Sbjct: 400 EHLSVDEIRWFLCSRDEENELDIDLSKLKNKDYNNQIFYILYAYSRALKITERIYFDLSE 459 Query: 468 AKDIFPDLDFDL---FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 +K F LD ++ +V+ E +F + L VH+ ++ Y Sbjct: 460 SKLSFEKLDSEVEQSLINSVLSVELKFQKAIQTLKVHI------------------MSDY 501 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 L+ LA FH + + + N + + R LV V I + L Sbjct: 502 LFSLAKKFHSFY------ESVSVINEPNTETQITRFALVKLVLRIFSELL 545 >gi|322367961|ref|ZP_08042530.1| arginyl-tRNA synthetase [Haladaptatus paucihalophilus DX253] gi|320551977|gb|EFW93622.1| arginyl-tRNA synthetase [Haladaptatus paucihalophilus DX253] Length = 583 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 164/612 (26%), Positives = 262/612 (42%), Gaps = 109/612 (17%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG-F 88 D + IE P + L+++AA L+ +G P IA I I D G+G + Sbjct: 25 DDLGIETPPEGVDAVLASSAAFRLAGEVGAPPPKIAADIADEIDADGYDHLAAAVGQGPY 84 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 +N S +Y + + + EYGR L G V +E SANPTGP+HVG R + GD Sbjct: 85 VNFLPSDTYYDETVET--AQDEEYGR-LEPTGENVVVEHTSANPTGPVHVGRARNPITGD 141 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEG-------- 199 +A ++ F+G +V R YY+NDAG QI +VF W Y+ ++ DLP+ Sbjct: 142 AIARILDFAGNDVDRHYYVNDAGRQI-----AVFTWAYETF---DEEDLPKPERERADYD 193 Query: 200 ---YY--PGVYLKHVGKELADKYSSEL------LNFPEEKWLPIVKDYSVQAMMKIIRDD 248 YY YL+ E AD+ +++ L +E+ V + V ++ +R Sbjct: 194 LVRYYRKGNAYLEEADPEDADEAETKIAAILQGLEENDEETYERVSEV-VDTVLSGMRVT 252 Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY-VYEGILPPPKSKTTQKCDMDRK 307 L L + D F+ E F D++ L + VYE +D Sbjct: 253 LDRLPAEFDEFVKETQFMFD--GSTDDVVSRLKEDEHAVYE----------EDAWQLDLS 300 Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367 + F +V L+SDG+ Y DLA+ + K + +D + V+G DH +L Sbjct: 301 EFGFEKNLV-------FLRSDGTSLYTTRDLAHHEWKLD-NYDRAVTVIGEDHKLQADQL 352 Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------- 416 + ++ V L GM S R G I + ++DE Sbjct: 353 AQALEILGNDTDKLTSFHYSWVNLPEGGM----STREGTGIDMDDLLDEAEKRAREEVES 408 Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFY 453 VG +VR+ ++ ++ ++ + F++ + + +++ P Y Sbjct: 409 RMDDRIRDDDLTEADVDRIARQVGIGAVRYDIISKQPTKTITFEWERALDFEAQSAP--Y 466 Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513 VQY +ARC I + P D+ P +++ ESE D LI +A +P VIE A Sbjct: 467 VQYVHARCCGILAEGDGEIP---TDIDP-SLLDSESERD-----LIEVIARFPNVIEEAA 517 Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573 EP+ +A Y + A F+ + RE P L A + ++ RL LV A I + Sbjct: 518 DDLEPHAVATYTREFAETFNAFY---RECPVL---TAEDEEVRDARLALVAAAKHTIANA 571 Query: 574 LNIIGVESPNEM 585 L +IG+E+P M Sbjct: 572 LGVIGIEAPESM 583 >gi|325973384|ref|YP_004250448.1| arginyl-tRNA synthetase [Mycoplasma suis str. Illinois] gi|323651986|gb|ADX98068.1| arginyl-tRNA synthetase [Mycoplasma suis str. Illinois] Length = 556 Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 145/590 (24%), Positives = 264/590 (44%), Gaps = 75/590 (12%) Query: 11 LKNYLKEIDCKIKVEKK----ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 LKN LK K+ +E K +LD++ +E ++ G STN ++S + Sbjct: 5 LKNQLKASLRKV-LENKGFSLLLDKVELEETKNSKFGFFSTNLPFLISSAYKKSIEESEQ 63 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSG--IEYGRNLIGKGTKVN 124 ++++ + + V A +G++N ++SP + S + I N K K Sbjct: 64 ILISSFPKNELIQKV-EAVQGYLNFFISPDLIENFFRSSLKRRKIISRANNEENKKDKYF 122 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV--F 182 +E VSANPTG +H+GH R V+ DT+++L+ ++ V R Y INDAG QI L S+ F Sbjct: 123 VEIVSANPTGILHIGHIRNGVITDTISNLLEYNNNSVFRTYLINDAGTQIEELLRSIHNF 182 Query: 183 WRYQQ--ALYNNDSDLPEGYYPGVYLKHVGKELADK--YSSELLNFPEEKWLPIVKDYSV 238 + + + + ++ Y G +K + ++ K Y+ EL +++ +K ++V Sbjct: 183 YSFTSRGGVGISLTEEINVKYTGSEIKECAEAISQKFGYNWEL---TDKELTHQIKLFAV 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + I+ +LK+L+IQ D + E S + ++I L + ++Y Sbjct: 240 EFFLDKIKKELKSLSIQVDSWDYESRI--CSESALTNLIKKL--EDFIY----------- 284 Query: 299 TQKCDMDRKQLLFRST--MVGDDVDRPLLKSDGSYTYFAADLAYF--KCKYERGFDNMIY 354 + L F+++ + G + D L+KSDG +YF DL Y K ++ ++ Sbjct: 285 -----LKDNALWFKTSAFLEGYEKDDVLVKSDGKISYFGQDLIYHLHKLEFLGKTGTIVN 339 Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414 + DH G++ R++A ++ + + + L RL +G I SKR F++ + Sbjct: 340 TLAEDHKGHIDRMKAFFYSIGVPQDSVKYKITRLSRLIMEGKKIVFSKRENIFLSAEELK 399 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI-------FRQ 467 + + D +R+ + R LD D K+K + N +FY+ YAY+R I + Sbjct: 400 EHLSVDEIRWFLCSRDEENELDIDLSKLKNKDYNNQIFYILYAYSRALKITERIYFDLSE 459 Query: 468 AKDIFPDLDFDL---FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 +K F LD ++ +V+ E +F + L VH+ ++ Y Sbjct: 460 SKLSFEKLDSEVEQSLINSVLSVELKFQKAIQTLKVHI------------------MSDY 501 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 L+ LA FH + + + N + + R LV V I + L Sbjct: 502 LFSLAKKFHSFY------ESVSVINEPNTETQITRFALVKLVLRIFSELL 545 >gi|268323984|emb|CBH37572.1| arginyl-tRNA synthetase [uncultured archaeon] Length = 558 Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 162/581 (27%), Positives = 272/581 (46%), Gaps = 91/581 (15%) Query: 42 HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI 101 H L++ A L+R P IAE IV + + + S +A +IN Y+S +L K Sbjct: 32 HADLASTVAFSLARSCKRAPKEIAEDIVNHLPAENTLISHAVATGPYINFYVSDFFLHKT 91 Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161 L + +G+E GK + IE SAN GP+H+GH R A++GD LA ++ +G++V Sbjct: 92 LQRLR-AGLETVEKNKGK---IIIEHTSANADGPLHIGHLRNAIIGDVLARVLKRAGFDV 147 Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD--KYSS 219 +YY+ND G QI A++V W + + D VY+ +EL + +Y S Sbjct: 148 ETQYYVNDLGRQI---AVAV-WGAGRMAFATDKKADHA-VADVYIA-ANRELEEHSEYVS 201 Query: 220 ---ELLNFPEEKWLPIVKDYS--VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274 EL+ E V+ Y V + +++ LK LNI+HD+F+ E +F R + Sbjct: 202 AVEELMRKYEAGDDATVRRYETVVNTCLTGVKETLKRLNIKHDLFVLEGEFVRS--GAVD 259 Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334 +++ L ++G V +D LL + + G + + + +SDG+ Y Sbjct: 260 AVVNELMQKGDV----------------KLDGTALLLQ--LGGIEKELVIKRSDGTSLYT 301 Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394 DLAY + K R D MI V G DH E V+ +++ A ++V E V Sbjct: 302 TRDLAYHRWKSNR-CDRMIDVFGKDH-------ELVSQQLTKALALLSVKAPEYVIFAFV 353 Query: 395 GMPI-KMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMM 426 +P +S RAG +I+ ++++ VG ++R+ M Sbjct: 354 SLPSGSLSTRAGRYISADELIEKIEERAYYEVEKRRDDLDEVTKPEIARMVGIGALRYDM 413 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR--QAKDIFPDLDFDLFPRNV 484 + + + FDF + K+ F VQY++AR SI R AK + D D+D + Sbjct: 414 VKVSPDKHIVFDFDDALDIEKKGAPF-VQYSHARACSILRAAAAKGVLSDDDYD----SA 468 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 + +E SEL+LI L+++ +I +P+++A Y +LA F+ + R P Sbjct: 469 LLRED----SELELIKMLSKFDYLIAGVASDLKPHRIAKYARELAEYFNLFY---RYCPV 521 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L +RK RL LV ++++ L+++G+++P EM Sbjct: 522 LN-ADEEHRK---ARLALVDCARVVLSNVLDVLGIKAPEEM 558 >gi|154149818|ref|YP_001403436.1| arginyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8] gi|166232801|sp|A7I4Y2|SYR_METB6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|153998370|gb|ABS54793.1| arginyl-tRNA synthetase [Methanoregula boonei 6A8] Length = 558 Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 154/579 (26%), Positives = 261/579 (45%), Gaps = 85/579 (14%) Query: 42 HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD--SVFIAGKG-FINLYLSPSYL 98 H L+T A L++ P+ IA+ +VA +K + ++ V + KG +IN +Y+ Sbjct: 30 HADLATTVAFALAKTKKQAPVKIAQDVVAALKNNRELSDLGVTVEAKGPYINFVFGSAYV 89 Query: 99 RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158 L + V G YG + ++ +E SANP GP+HVGH R +++GD+LA +G Sbjct: 90 TAALKAAVQPG--YGSFPAKESPRIVLEHTSANPNGPLHVGHIRNSIIGDSLARAFRKAG 147 Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALY-NNDSDLPEGYYPGVYL---KHVGKELA 214 Y + EYY+ND G QI V W + + ++S+ + + VY+ + + K+ Sbjct: 148 YPLEVEYYVNDMGRQIAI----VTWGFDHLEHGQHESEKEDAHIARVYIAANREIEKDPG 203 Query: 215 -DKYSSELLNFPEEKWLPIVKDY--SVQAMMKIIRDDLKALNIQHDIFISEDDFHR-GDP 270 K +L+ E VK + V + LK LN++HD F+ E DF + GD Sbjct: 204 ITKQVDKLMELVESGDPETVKKFRREVSRCLDGFAVTLKNLNVKHDRFVWESDFVKNGDT 263 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + I+NL + +EG L +D + F + V + +SDG+ Sbjct: 264 KAVIAKIENLPQA--THEGTL----------LALDLAEFGFTNKYV-------MRRSDGT 304 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 Y A DLA+ K + FD I V+G+DH +L+ + EK +I + E V Sbjct: 305 SVYAARDLAFHTWK-NQNFDRAIDVLGADHKLIGAQLQCTMQLLGEKAPEI--VHFEFVS 361 Query: 391 LYRDGMPIK-------------MSKRAGDFITL----------RHVVDEVGSDSVRFMML 427 L M + ++KRA D +T R++ D V +R+ ++ Sbjct: 362 LPEGSMSTRAGKFVSADELIDEVTKRAFDEVTTRRPELDEATRRNIADSVARAGIRYDIV 421 Query: 428 WRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 + FD+ + + + + P Y+QYA+AR SI +A F + +DL Sbjct: 422 KISPEKSTVFDWKQALDFERQSGP--YIQYAHARACSILEKA-GAFEEC-YDLATEQ--- 474 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 E+ L +A++P VIE P+ LA Y ++LA F+ + + P L+ Sbjct: 475 --------EIILAKKIAKFPSVIEKVVTELRPHLLATYAHELADTFNTFYHY---EPVLK 523 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++ RL LV AV + + L +G+++ + M Sbjct: 524 ----SEGEVRDRRLTLVKAVQNTLQESLETLGIDAIHTM 558 >gi|327400090|ref|YP_004340929.1| Arginyl-tRNA synthetase [Archaeoglobus veneficus SNP6] gi|327315598|gb|AEA46214.1| Arginyl-tRNA synthetase [Archaeoglobus veneficus SNP6] Length = 557 Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 152/586 (25%), Positives = 265/586 (45%), Gaps = 90/586 (15%) Query: 38 RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 R+ H L+ A L++ + P +AE IV+++ I+ D G++N + S + Sbjct: 24 RESEHADLACTIAFKLAKEMKKKPQEVAEEIVSQLSIESDYIGSVEVVNGYVNFFASYEF 83 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 L ++ I+ S EYG + G +V IE SANP GP+H+GH R +++GDTLA + + Sbjct: 84 LEDTINYILDSDEEYGS--LALGGEVLIEHTSANPDGPLHIGHIRNSIIGDTLARIFRKA 141 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK---------H 208 G VT YY+ND G Q+ AL+V + L + ++ P+ Y+ Sbjct: 142 GVNVTTHYYVNDMGRQV---ALTVLGIEKFGL--DKTEKPDHAVAKAYIAINRYIEEHPE 196 Query: 209 VGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 E+ K + + E E+ + +D +V ++ ++ L+ LNI HD ++ E +F Sbjct: 197 EKDEIEAKVEELMKKYEEGDEETAKLFRD-AVSRALEGAKETLENLNIVHDEYVWESEFI 255 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 R + II L +G + + +D +L ++ +V + + Sbjct: 256 RN--GYVDRIISMLDEKGLI----------QKDGAWTIDLSELGYKKNVV-------IRR 296 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386 +G+ Y DLAY K E F+ I V+G+DH +L + + K +I + Sbjct: 297 ENGTTLYVTRDLAYHLWKNE-NFERFINVLGADHKLIGSQLSDILKLIGLKPPEI--VFF 353 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEV-----------GSD--------------S 421 E V L MS R G FI+ ++D V G D + Sbjct: 354 EFVSLPEGS----MSTRKGKFISADELIDRVYREAYEIIKDRGFDEKEKRDVAKAVAIGA 409 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA-KDIFPDLDFDLF 480 +R+ + + + FD+ K + ++ Y+QY++AR SI R+A + PDL+F Sbjct: 410 LRYDFIRVAPEKPITFDWKKALDFERQTAS-YIQYSHARACSILRKAVSEGMPDLEF--- 465 Query: 481 PRNVIPQESEFDTS-ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 E T E +L++ L+++ VIE P A Y+ D+A+ F+ ++ Sbjct: 466 -------VGELCTPLERKLVMLLSKFSSVIERVVKELRPNVFAEYVMDVATTFNDFYT-- 516 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++P L+ +A R M RL +V A ++ +GL ++G+E M Sbjct: 517 -QHPVLK-AEAEYR---MHRLAIVDACRIVLRNGLEVLGIEPLERM 557 >gi|282165349|ref|YP_003357734.1| arginyl-tRNA synthetase [Methanocella paludicola SANAE] gi|282157663|dbj|BAI62751.1| arginyl-tRNA synthetase [Methanocella paludicola SANAE] Length = 564 Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 159/590 (26%), Positives = 256/590 (43%), Gaps = 99/590 (16%) Query: 39 DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98 + AH +S+ L + L +P IA+ IV+++ + V AG ++N Y + YL Sbjct: 31 ESAHADVSSALPFRLGKELKKNPAQIAKEIVSKMGTSEHIGKVDAAGP-YVNFYANEKYL 89 Query: 99 RKILSSIVVSGIEYGRN---LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155 + L I ++ GR+ L KG KV +E SANPTGP+HVG R V+GDTLA +M Sbjct: 90 AESLGDI----LKKGRSSVLLPPKGVKVVLEHTSANPTGPLHVGRGRNPVIGDTLARVMR 145 Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQ---------ALYNNDSDLPEGYYPGVYL 206 GY+V +YY++D G Q T + W Y + D + E Y L Sbjct: 146 SGGYDVQVQYYVDDMGKQEAT----IVWGYDHLDSLSLKPPEIEKPDHAIVEVYRAATDL 201 Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYS--VQAMMKIIRDDLKALNIQHDIFISEDD 264 + E +K SE+LN E + + + V M + L +N+ +D+F+ E Sbjct: 202 RK-SNEAVEKEISEILNKYEHMDPEVSEKFKKMVNTCMDGQKTTLARMNVFYDLFVWESG 260 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ--LLFRSTMVGDDVDR 322 F + + +I++ LA+ Y +RK L + G D D Sbjct: 261 FVKN--GSVNEIVERLAKTPYA------------------ERKDGALALNLSSFGMDKDF 300 Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 L ++DG+ Y D+AY K D + V+G D ++RL+A + EKK Sbjct: 301 VLTRADGTSLYTTRDIAYHIWKLS-NCDEAVNVLGEDQKLAMQRLDATLKILGEKKTP-R 358 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITL---------------------------RHVVD 415 ++ V L +MS R G + L R + D Sbjct: 359 IVFYSFVSLPEG----RMSTRKGVVVNLDDLLDEAVARAYIEVDKRRKDLPEDKKRKIAD 414 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 VG ++RF ++ + + F + + + K+ F +QY++AR SI +AK P Sbjct: 415 LVGIGAIRFDIIRVAPEKSITFKWEQALDFEKQGAPF-IQYSHARTCSILEKAK---PG- 469 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 FD + +E E E LI +A P V++ A+ +P+ LA Y +LA F+ Sbjct: 470 SFD----ATVLKEKE----EAALIKKMAMLPYVVDVASKDLKPHLLANYARELAESFNQF 521 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R V + +L RL LV A + + L+++G+ +P EM Sbjct: 522 Y-------RFVPVLSAEPELREARLALVDAARITLANALDLLGIAAPEEM 564 >gi|110669121|ref|YP_658932.1| arginyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790] gi|121689569|sp|Q18FC1|SYR_HALWD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|109626868|emb|CAJ53337.1| arginine--tRNA ligase [Haloquadratum walsbyi DSM 16790] Length = 596 Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 154/617 (24%), Positives = 270/617 (43%), Gaps = 106/617 (17%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD------VDSVFI 83 D + +E P + L+++ A L+R P +A+ I A I ++PD +D V Sbjct: 25 DDLGVETPPEDVPATLASSVAFRLARSAKDSPPRVADDIAAAIDLEPDSQTYEYIDHVDT 84 Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143 G +IN +++ +Y L++ G YG +L G V +E SANPTGP+HVG R Sbjct: 85 RGP-YINFHVNDAYYMDTLTAAQDPG--YG-HLPNTGQSVVVEHTSANPTGPVHVGRGRN 140 Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ----ALYNNDSDLPEG 199 + GD +A L+ ++G V R YY+NDAG Q+ W Y++ +L + + D P+ Sbjct: 141 TIFGDAVARLLEYNGDTVDRHYYLNDAGRQVGVFT----WAYEKFDADSLPDPERDRPD- 195 Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS---------VQAMMKIIRDDLK 250 Y V G E + ++ + E++ I+ VQ ++ + D ++ Sbjct: 196 -YDLVRYYRRGNEFLENADADAVESAEDEIASIINGLEAGNTETYERVQTVVDQVIDGMQ 254 Query: 251 ----ALNIQHDIFISEDDF-HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 L+ D FI E F GD + ++ KS + D Sbjct: 255 HSFDRLSAIFDEFIKETRFIQNGDA-----------------DAVVERLKSADCAVYEDD 297 Query: 306 RKQLLFRSTMVGDDVDRPL--LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 Q+ + D+++ L L+SDG+ Y DLA+ + K++ +D + ++G DH Sbjct: 298 AWQI----DLSAYDIEKNLVFLRSDGTTLYTTRDLAHHEWKFD-NYDASVTILGEDHKLQ 352 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------- 416 ++L+A + Q+ V L G MS R G + L ++DE Sbjct: 353 AEQLDATLQILGNDTDQLRQPFYSWVNLPEGG----MSTRKGTGVDLDDLLDEAIARARE 408 Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKEN 449 VG +VR+ ++ ++ ++ + F++ + + +++ Sbjct: 409 EVHDRLGSRVRDDSLSSDDIDRIARQVGVGAVRYDIVSKQPTKGITFEWDRALDFEAQSA 468 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT-SELQLIVHLAEYPRV 508 P Y+QY +ARC I + DLD D + IP + T +E L+ +A +P V Sbjct: 469 P--YIQYVHARCCGIETEVNS-NTDLDIDALTSDSIPDITMLRTDAERALLQEIARFPAV 525 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 +E+A EP+ +A + A F+ + RE + A + +T R+ LV A Sbjct: 526 VESAAADLEPHVIATFARSFAEQFNTFY---RE---CSVLNAESEIMTAARVSLVRAARH 579 Query: 569 IINSGLNIIGVESPNEM 585 + + L+I+GVE+P M Sbjct: 580 TVANALDIVGVEAPQSM 596 >gi|253317262|ref|ZP_04840475.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. CF-Marseille] Length = 211 Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 80/181 (44%), Positives = 110/181 (60%), Gaps = 1/181 (0%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFIN 90 I IE P+D +G +TN AM+L++ +P IA+ IV + + V + IAG GFIN Sbjct: 31 IKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFIN 90 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 YL YL I+ + G ++G KG V +E+VSANPTG +H+GH R A VGD L Sbjct: 91 FYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDAL 150 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+++ +GY VTREYYINDAG QI LA S+ R+ +AL +N +PE Y G + +G Sbjct: 151 ANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIG 210 Query: 211 K 211 K Sbjct: 211 K 211 >gi|15668412|ref|NP_247208.1| arginyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661] gi|2501049|sp|Q57689|SYR_METJA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|1590971|gb|AAB98223.1| arginyl-tRNA synthetase (argS) [Methanocaldococcus jannaschii DSM 2661] Length = 566 Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 164/624 (26%), Positives = 277/624 (44%), Gaps = 103/624 (16%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVI--ERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 D S + N LKE+ + K+I I I ++ + G S N L++ L +P Sbjct: 2 DIKSNIINALKEV-----ISKEICKEIDIKLDKTPNLELGDYSVNICFRLAKELKKNPKI 56 Query: 64 IAELIVARIKIDPDVDSV--FIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKG 120 IAE +V ++K +++ V A G+IN Y+ + + ++ I G YGR K Sbjct: 57 IAEELVDKLKA-MNIEGVKEIKAVNGYINFYIDYNKFAKNLMEEIDKKGNNYGRG-DKKS 114 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 K+ +E SANP GP+H+GH R A++GD L ++ F GY+V YY+ND G Q+ + Sbjct: 115 IKIILEHTSANPNGPLHIGHLRNAIIGDCLKRILEFYGYDVETHYYVNDMGRQMALVVYG 174 Query: 181 VFWRYQQALYNNDSDLPEGYYP-GVYLKHVGK------ELADKYSSELLNFPEEKWLPIV 233 + D + E Y YL+ + EL KY L N E+ + Sbjct: 175 IELFGLDKEKKKDHAIAETYVKINKYLEEHPEEEEKILELMRKYEDALEN-NEDNEITKK 233 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 +++V + I++ LK LNI+HD F+ E + R ++ +I+ L G V Sbjct: 234 FEFAVNYALDGIKETLKNLNIKHDTFVWESSYVRN--GMVKKVIEKLMETGKVI------ 285 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353 K +T +D MV L +++G+ Y D+AY K + D I Sbjct: 286 -KEETYM---LDLSDFGIEKKMV-------LARANGTSLYSTRDIAYHLDKLSK-CDIGI 333 Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 V+G+DH + ++A + K + V+ E + L MS R G FI+ + Sbjct: 334 DVLGADHKLTAEMVKAALKLLGSKVPE--VIFYEFISLPEGS----MSTRRGRFISTDEL 387 Query: 414 VDE---------------------VGSDSVRFM---------MLWRKNSELLDFDFCKVK 443 ++E +G +VR+ M++R L DF KV Sbjct: 388 LEEAIKRAKEECNKRGVEENIAYDIGLGAVRYNIARISPEKPMVFRWEEAL---DFEKV- 443 Query: 444 EQSKENPVFYVQYAYARCRSIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501 ++QYA+ARC SI ++A K + + F+ E + E +LI Sbjct: 444 ------GCPFIQYAHARCCSILKEAENKGVKDEAVFNY----------ELTSEEKELIKM 487 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 L E+ +I+ + ++ + LA YL +LA F+ +++ P L ++ K + RL+ Sbjct: 488 LDEFKDIIKESAESRRVHILANYLLELAKAFNRFYANC---PILMTKVDDDVKKS--RLK 542 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 LV + +++ +GL ++G+ P M Sbjct: 543 LVKSTKTVLETGLELLGINCPGRM 566 >gi|55379731|ref|YP_137581.1| arginyl-tRNA synthetase [Haloarcula marismortui ATCC 43049] gi|74516150|sp|Q5UXX8|SYR_HALMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|55232456|gb|AAV47875.1| arginyl-tRNA synthetase [Haloarcula marismortui ATCC 43049] Length = 579 Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 166/611 (27%), Positives = 266/611 (43%), Gaps = 119/611 (19%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG-FINLY 92 IE P + L+++ A L+ +G P +A I I D + +G ++N Sbjct: 29 IEEPPEDVDAVLASSVAFRLAGEVGTAPPNVASDIADAIAADDLTYVSDVTTQGPYVNFL 88 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 S +Y + L S+ SG +GR L + T V +E SANPTGP+HVG R ++GD +A Sbjct: 89 PSEAYFAETLQSVTESG--FGR-LPDRDTSVVVEHTSANPTGPVHVGRARNPIIGDAVAR 145 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEG------------ 199 ++ ++GY+V R YY+NDAG QI +VF W Y+ ++ DLPE Sbjct: 146 VLDYAGYDVDRHYYVNDAGRQI-----AVFTWAYETF---DEDDLPEPERESPEYEMVRY 197 Query: 200 YYPGVYLKHVGK----ELADKYSSELL----NFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251 Y G + G E A+ +L + EE + + + V ++ +++ L Sbjct: 198 YRKGNTILEDGDPDEVEAAEAEVQSILQGLEDGDEETYERVAE--VVDTVLGGMQNTLGR 255 Query: 252 LNIQHDIFISEDDFHR-GDPSPIRDIIDNL-ARQGYVYEGILPPPKSKTTQKCDMD--RK 307 L + D F+ E F R GD D++D L VYE + + D+ K Sbjct: 256 LPAEFDEFVKETKFMRNGDTD---DLVDRLKGLDCAVYE--------EDAWQLDLPDFEK 304 Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367 L+F L+SDG+ Y DLA+ + K++ +D + V+G DH +L Sbjct: 305 NLVF-------------LRSDGTSLYTTRDLAHHEWKFDT-YDRAVTVLGEDHKLQADQL 350 Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------- 416 A + Q+ + V L GM S R G I L ++DE Sbjct: 351 AAALELLDNDTDQLRQVFYSWVNLPEGGM----STREGTGIDLDDLLDEAIDRAREEVES 406 Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYV 454 VG +VR+ ++ ++ ++ + F++ + + +++ P YV Sbjct: 407 RLDDRTRGDLDEDDIDRIARQVGIGAVRYDIVSKQPTKGITFEWDRALDFEAQSAP--YV 464 Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514 QY +ARC I + PD + DL P + + E L+ LA +P VIE A Sbjct: 465 QYVHARCCGILGDVETDIPD-EPDLDPLS--------EPEERDLLRELARFPAVIEAAAD 515 Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 P+ +A Y DLA F+ + RE P L + + RL LV + I + L Sbjct: 516 DLTPHTVATYTRDLAETFNAFY---RECPVLD----ADPETRAARLALVDGTRTTIANAL 568 Query: 575 NIIGVESPNEM 585 + +GVE+P M Sbjct: 569 DALGVEAPTSM 579 >gi|14591265|ref|NP_143342.1| arginyl-tRNA synthetase [Pyrococcus horikoshii OT3] gi|7674343|sp|O59147|SYR_PYRHO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|256032304|pdb|2ZUE|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Arginyl-Trna Synthetase Complexed With Trna(Arg) And An Atp Analog (Anp) gi|256032306|pdb|2ZUF|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Arginyl-Trna Synthetase Complexed With Trna(Arg) gi|3257902|dbj|BAA30585.1| 629aa long hypothetical arginyl-tRNA synthetase [Pyrococcus horikoshii OT3] Length = 629 Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 157/629 (24%), Positives = 281/629 (44%), Gaps = 116/629 (18%) Query: 39 DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLS-PS 96 D G T A L++ L P+ IAE IV ++K++ P+ A G+IN+++ P Sbjct: 35 DPKLGDFGTPIAFKLAKLLKRPPIEIAEKIVEKLKLNLPEGIKDVKAVNGYINVFIDYPH 94 Query: 97 YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 + R +++ I+ G +G + IGKG KV +E S NPT P+H+GH R A++GD +A ++ F Sbjct: 95 FARILINDILAKGDRFGSSEIGKGKKVIVEHTSVNPTKPLHMGHARNAILGDVMARILRF 154 Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRY---------------QQALYNNDSDLPEGYY 201 GYEV + YI+D G Q V+W Y ++ L +N P + Sbjct: 155 LGYEVEVQNYIDDLGIQF----AQVYWGYLRLKEEFERIMNELRERGLKDN----PIDHA 206 Query: 202 PGVYLKHVGKELADKYSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDDLKA---LNIQH 256 G+ V + L D + EL N + K L + Y + +++R + L +++ Sbjct: 207 LGLLYVEVNRRLED--NPELENEIRDIMKKLESGELYGRKLAEEVVRAQMVTTYKLGVKY 264 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D+ + E D R I ++ L++ E P K MD ++L Sbjct: 265 DLLVWESDIVRRKLFEI--ALELLSKN----ENFYIPSDGKYRGAFVMDLRKLF------ 312 Query: 317 GDDVDRPLL---KSDGSYTYFAADLAYFKCKYE--------RGFDNMIYVMGSDHSGYVK 365 D+ P+L +SDG+ TY D+AY K+ + +D+ + D Sbjct: 313 -PDMKNPILVLRRSDGTATYTGKDIAYHLWKFGKIDVDLLYKEWDSTTWTTAPDGKSMPN 371 Query: 366 RLEAVAAAVS-----EKKAQINVLLCELVRLYRDGMPI--------------KMSKRAGD 406 + ++ +K Q+ + + + D K S R G Sbjct: 372 KFGNANIVINVIGAEQKHPQLAIKYALQLLGFEDAAANLYHLAYEHVERPEGKFSGRKGT 431 Query: 407 FITLRHVVDEVGSDSVRFM--MLWRKNSELLDFDFCKVKEQS----------KENP---- 450 ++ VDEV ++V+ ++ KN L D + +V E+ K +P Sbjct: 432 WVGF--TVDEVIQEAVKRARELIEEKNPALSDEEKAEVAEKVGIGAIRYNLIKYSPDKKI 489 Query: 451 VF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 +F Y+QYA+ARC SI R+A++ +D + +N ++ E Sbjct: 490 IFRWEDVLNFEGESAPYIQYAHARCSSILRKAEEEGIKVDPETLFKNA--DFTKLSERER 547 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L++ L+++PR++E A +P+ +A++ +LAS+F+ + ++P L+ + + Sbjct: 548 ELVIMLSKFPRIVEQAGKDVKPHLIAWFANELASLFNKFYM---DHPVLKAEEG----VR 600 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL LV AV ++ + L ++G+E+P M Sbjct: 601 EARLLLVMAVEQVLKNALYLMGIEAPERM 629 >gi|126180153|ref|YP_001048118.1| arginyl-tRNA synthetase [Methanoculleus marisnigri JR1] gi|125862947|gb|ABN58136.1| arginyl-tRNA synthetase [Methanoculleus marisnigri JR1] Length = 555 Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 158/584 (27%), Positives = 250/584 (42%), Gaps = 99/584 (16%) Query: 42 HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG-FINLYLSPSYLRK 100 H L++ A L++ P IA I ++ +P++ V + G ++N P+ Sbjct: 31 HADLASTIAFKLAKTEKRAPQKIAADIAEKLSGNPELGDVRVEAAGPYVNFRFGPT---- 86 Query: 101 ILSSIVVSGIEYGRNLIGKGT-KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 +LS V IE G + + + +V +E SANP GP+HVGH R V+GDTLA +G Sbjct: 87 LLSEAVREAIEPGYGALQRRSGRVVLEHTSANPNGPLHVGHIRNTVIGDTLARTFRKAGD 146 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQA-LYNNDSDLPEGYYPGVYLKHVGKELADKYS 218 + +YY+ND G QI V W + + + + + Y VY+ +E+ Sbjct: 147 PLEVQYYLNDMGRQIAI----VSWGFDHLDIARKEGEKEDHYVARVYVA-ANREIEKNPG 201 Query: 219 -----SELLNFPEEKWLPIVKDY--SVQAMMKIIRDDLKALNIQHDIFISEDDFHR-GDP 270 L+ E V + +V + I+ L ALN HD F+ E DF R GD Sbjct: 202 ITEEIDHLMQKVERGDAETVAKFRRAVSLCAEGIKATLAALNAHHDRFVWESDFVRIGD- 260 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + I++ + R LP T D+ + G + L +SDG+ Sbjct: 261 --VDRIVEQVRR--------LPQAHEDETLWVDLSEQ---------GFEKKYILRRSDGT 301 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 Y DLAY K R +D MI V+G+DH +L A + EK +I + E V Sbjct: 302 SVYSTRDLAYHTWK-ARNYDRMIDVLGADHKLIGGQLRATLELLGEKAPEI--VFFEFVS 358 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK--------- 441 L MS RAG F++ +++EV + + F + + EL + + C Sbjct: 359 LPEGS----MSTRAGKFVSADELIEEVAAKA--FDEVTARRPELPEEERCAIAKSVAIAA 412 Query: 442 -----VKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 VK +++ VF Y+QYA+AR SI +A + F R Sbjct: 413 IRYDIVKVSPEKSTVFNWKEALDFERQSGPYIQYAHARACSILEKAGE---------FER 463 Query: 483 NVIPQESEFDTS-ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 F+T E+ L HLA +P IE P+ LA Y +LA +F+ + + Sbjct: 464 AYT-----FETDHEVALARHLARFPAAIEQTVQELRPHLLAAYARELADLFNAFYHY--- 515 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +P L+ + + RL LV AV + + L +G+++ M Sbjct: 516 DPVLK----SEGETRNSRLALVDAVRNTLQESLETLGIDALRSM 555 >gi|219850962|ref|YP_002465394.1| arginyl-tRNA synthetase [Methanosphaerula palustris E1-9c] gi|254782973|sp|B8GJL7|SYR_METPE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|219545221|gb|ACL15671.1| arginyl-tRNA synthetase [Methanosphaerula palustris E1-9c] Length = 559 Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 156/605 (25%), Positives = 257/605 (42%), Gaps = 98/605 (16%) Query: 23 KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82 +V K D I H L++ A L++ P IAE + + +P++ + Sbjct: 11 RVLKACTDETEIALTDGGEHADLASTVAFALAKKRHQAPKVIAEELAVTLAANPELAGIR 70 Query: 83 IAGKG-FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 + G ++N P YL + L + V K ++ +E SANP GP+HVGH Sbjct: 71 VEALGPYLNFSFGPKYLEETLKAAVQDNFGTAPT---KPVRIVLEHTSANPNGPLHVGHI 127 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYY 201 R +++GDTLA +GY V +YY+ND G QI +A Y D L G Sbjct: 128 RNSILGDTLARAFRKAGYRVEVQYYVNDMGRQIAIVA-----------YGFDH-LDTGAK 175 Query: 202 PGVYLKHVGKELADKYSSELLNFPE------------EKWLPIVKDYSVQAMMKII---R 246 PG H + + +L P+ EK P + + + + + Sbjct: 176 PGEKADHHIARVYVAANRDLEANPDKGAEIDERMQLIEKRDPATATQFRELVSRCLDGFK 235 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 ++ LN++HD FI E DF + I D+ L R + + + PP + T D+ Sbjct: 236 VTMQGLNVKHDRFIWESDFVK-----IGDMEKVLGRLAKIPQAV-PPTEEDGTFSLDL-- 287 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366 ++ + V L +SDG+ Y A DLAY K R FD +I V+G+DH + Sbjct: 288 SSCGYKKSYV-------LRRSDGTSVYAARDLAYHIWK-GRNFDRVIDVLGADHKLITGQ 339 Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 L ++EK + V+ E V L M S RAG F++ +++E+ ++ + Sbjct: 340 LVCTLRLIAEKPPE--VVHFEFVSLPEGSM----STRAGTFVSADELIEEMQKRAIEEVQ 393 Query: 427 LWRKNSELLDFD------------FCKVKEQSKENPVF--------------YVQYAYAR 460 + R + + D + +K +++ VF YVQYA+AR Sbjct: 394 VRRPEIPVEERDAIAASVARAAIRYDIIKVSPEKSTVFDWKEALDFDRQSGPYVQYAHAR 453 Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520 SI +A +DL ES + E+ L+ H+A++P +IE+ P+ Sbjct: 454 ACSILDRAGPF--QERYDLL-------ESPY---EIALVKHIAKFPSIIESVVRDLRPHM 501 Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 LA Y DLA +F+ + + +P L+ + RL LV A + L +G++ Sbjct: 502 LATYARDLADLFNTFYHY---DPVLK----GEGPVRESRLTLVLAAEKTLKEVLETLGID 554 Query: 581 SPNEM 585 + M Sbjct: 555 ALRSM 559 >gi|289193278|ref|YP_003459219.1| arginyl-tRNA synthetase [Methanocaldococcus sp. FS406-22] gi|288939728|gb|ADC70483.1| arginyl-tRNA synthetase [Methanocaldococcus sp. FS406-22] Length = 566 Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 166/624 (26%), Positives = 283/624 (45%), Gaps = 103/624 (16%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D S + N LKE+ K ++ K++ I +++ + G S N L++ L +P IA Sbjct: 2 DIKSNIINALKEVISK-EIGKEL--DIKLDKTPNLELGDYSVNICFRLAKELKKNPKIIA 58 Query: 66 ELIVARIKIDPDVDSV--FIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTK 122 E +V ++K +++ V A G+IN Y+ + + +L I G +YG+ KG K Sbjct: 59 EELVDKLKA-MNIEGVKEIKAVNGYINFYIDYNKFAKHLLGDIDKKGNDYGKG-DKKGIK 116 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 + +E SANP GP+H+GH R A++GD L ++ F GY+V YY+ND G Q +AL V+ Sbjct: 117 IILEHTSANPNGPLHIGHLRNAIIGDCLKRILEFYGYDVETHYYVNDMGRQ---MALVVY 173 Query: 183 WRYQQALYNN---DSDLPEGYYP-GVYLKHVGK------ELADKYSSELLNFPEEKWLPI 232 L N D + E Y YL+ + EL +Y + L E + Sbjct: 174 GIDLFGLDENKKKDHAIAETYVKINKYLEEHPEEEEKILELMREY-EDALEKNENNEITK 232 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 +++V + I++ L LNI+HD F+ E + R ++++I L G V Sbjct: 233 KFEFAVNYALDGIKETLNNLNIKHDTFVWESSYVRN--GLVKEVIKKLMETGKVI----- 285 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 K +T +D + + MV L +++G+ Y D+AY K + D Sbjct: 286 --KEETYM---LDLSEFGIQKKMV-------LARANGTSLYSTRDIAYHLDKLSK-CDIG 332 Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412 I V+G+DH + ++A + K + V+ E + L MS R G FI+ Sbjct: 333 IDVLGADHKLTAEMVKAALKLLGSKVPE--VIFYEFISLPEGS----MSTRRGRFISADE 386 Query: 413 VVDE---------------------VGSDSVRFMM--------LWRKNSELLDFDFCKVK 443 +++E +G +VR+ + + K E LDF+ Sbjct: 387 LLEEAIKRAKEECNKRGVEENIAYDIGLGAVRYNIARISPEKPMVFKWEEALDFEKVGCP 446 Query: 444 EQSKENPVFYVQYAYARCRSIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501 ++QYA+ARC SI ++A K + + F+ E E +LI Sbjct: 447 ---------FIQYAHARCCSILKEAENKGVKDEAVFNY----------ELTNEEKELIKM 487 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 L E+ +I+ + ++ + LA YL +LA VF+ +++ P L +N K + RL+ Sbjct: 488 LDEFKDIIKESAENRKVHVLANYLLELAKVFNRFYANC---PILMTKVDDNVKKS--RLK 542 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 LV + +++ GL ++G+ P M Sbjct: 543 LVKSTKTVLEIGLGLLGIRCPGRM 566 >gi|261403793|ref|YP_003248017.1| arginyl-tRNA synthetase [Methanocaldococcus vulcanius M7] gi|261370786|gb|ACX73535.1| arginyl-tRNA synthetase [Methanocaldococcus vulcanius M7] Length = 566 Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 162/598 (27%), Positives = 269/598 (44%), Gaps = 100/598 (16%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSV--FIAGKGFI 89 I +E+P + G S N L++ L P IAE IV ++K + +++ + A G+I Sbjct: 25 IKLEKPPNTELGDYSVNICFKLAKLLKKSPKMIAEDIVKKLK-EKNIEGIKEIKAINGYI 83 Query: 90 NLYLSPSYLRKILSS-IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 N Y+ + K L+ I YGR K K+ +E SANP GP+H+GH R A++GD Sbjct: 84 NFYIDNNAFAKYLTEKICEEKSNYGRGH-KKSVKIILEHTSANPNGPLHIGHLRNAIIGD 142 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---DSDLPEGYYP-GV 204 L ++ F GY+V YY+ND G Q +AL V+ L N D + E Y Sbjct: 143 CLKRILEFYGYDVETHYYVNDMGRQ---MALVVYGIELFGLDRNKKKDHAIAETYIKVNK 199 Query: 205 YLKHVGK------ELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDDLKALNIQH 256 YL+ + EL KY L + K I K +++V + I++ L LNI+H Sbjct: 200 YLEENPEEEEKILELMRKYEDAL---EKNKDTEITKKFEFAVNYALDGIKETLNNLNIKH 256 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D F+ E + R ++++I L G + K +T +D MV Sbjct: 257 DTFVWESSYVRN--GLVKEVIKKLMETGKII-------KEETYM---LDLSDFGIEKKMV 304 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 L +++G+ Y D+AY K + D I V+G+DH + ++A + Sbjct: 305 -------LARANGTSLYSTRDIAYHLDKLSK-CDIGIDVLGADHKLTAEMVKAALKLLGS 356 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416 K +I + E + L MS R G FI+ +++E Sbjct: 357 KVPEI--IFYEFISLPEGS----MSTRRGRFISADELLEEAIKRAKEECNKRDVEENIAY 410 Query: 417 -VGSDSVRFMM--------LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467 +G +VR+ + + K E LDF+ KV ++QYA+ARC SI ++ Sbjct: 411 DIGLGAVRYNIARISPEKPMVFKWEEALDFE--KV-------GCPFIQYAHARCCSILKE 461 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 A++ + D +F + +E E LI L E+ +I+ + ++ + LA YL + Sbjct: 462 AENKGIE-DEAIFNYELTKEEKE-------LIKKLDEFKDIIKESAENRKVHILANYLLE 513 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA +F+ +++ P L ++ N + RL+LV + ++ GL ++G+ P M Sbjct: 514 LAKIFNRFYANC---PIL--LEKVNDDVKKSRLKLVKSTKIVLEIGLGLLGINCPGRM 566 >gi|150401525|ref|YP_001325291.1| arginyl-tRNA synthetase [Methanococcus aeolicus Nankai-3] gi|166232800|sp|A6UW07|SYR_META3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|150014228|gb|ABR56679.1| arginyl-tRNA synthetase [Methanococcus aeolicus Nankai-3] Length = 574 Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 158/611 (25%), Positives = 265/611 (43%), Gaps = 114/611 (18%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSV--FIAGKG 87 + I +E P + G STN + L++ L P+ IAE + + I +++ + A G Sbjct: 23 ETIRLEEPPSISLGDYSTNISFKLAKLLKKSPMVIAEELT-NLLISENIEGIKEIKAVNG 81 Query: 88 FINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 +IN ++ + Y + ++ I ++G+ K KV IE SANP GP+H+GH R A+V Sbjct: 82 YINFFIDYNLYSKSGIAKISSEKDKFGQGA-PKNKKVIIEHTSANPNGPLHIGHSRNAIV 140 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQ--INTLALSVFWRYQQALYNNDSDLPEGYYPGV 204 GD+L ++ F+GY V +YY+ND G Q I L F +Q D + E Y+ Sbjct: 141 GDSLKRIVEFAGYVVEAQYYVNDMGRQEAIVVYGLDKFELNEQQ--KPDHAIGEVYFKAN 198 Query: 205 YLKHVGKE-------LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257 L + E L KY E EE L +Y+V + ++ L LNI HD Sbjct: 199 QLLNENPEQEEEILKLMKKY-EEASEKGEENELTNKFNYAVNYALSGFKETLNNLNIHHD 257 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 F+ E + + ++ +I L G V K ++R + Sbjct: 258 KFVWESSYVKN--GMVQKVIQTLKDTGKV-------------------EKDEVYRLDLSE 296 Query: 318 DDVDRPLL--KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375 +D+ L+ + +G+ Y D+AY K + D I ++G+DH +L A S Sbjct: 297 FGIDKKLVLARLNGTSLYSTRDIAYHIDKM-KNCDIGINILGADH-----KLTAEMVNAS 350 Query: 376 EKKAQIN---VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM------- 425 K N V+ E + L MS R G FI++ + +E + +V+ + Sbjct: 351 LKLLGYNTPEVVFYEFISLPEGS----MSTRRGTFISIDELYEEAKNRAVKEIKKRNETT 406 Query: 426 -----------------------------MLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456 M++R + L DF KV PV +QY Sbjct: 407 EEEEINNIAHKIAVGAVRYNIVRISPDKAMVFRWDDAL---DFEKVGA-----PV--IQY 456 Query: 457 AYARCRSIFRQ--AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514 A+ARC I + + P +LF E + + E LI L ++P+++E + Sbjct: 457 AHARCCRILEKENTNENKPIDATELF-------EYDLNEHEKLLIKILLKFPKIVEKSAD 509 Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 A++P +A Y D+A F+ ++++ + N+ + RL+LV +II + L Sbjct: 510 AKKPQIMATYALDVAQTFNRYYAN------CPIFKEENKNIVYSRLELVKCTKTIIENAL 563 Query: 575 NIIGVESPNEM 585 N++G+E P +M Sbjct: 564 NLLGIECPGKM 574 >gi|256810399|ref|YP_003127768.1| arginyl-tRNA synthetase [Methanocaldococcus fervens AG86] gi|256793599|gb|ACV24268.1| arginyl-tRNA synthetase [Methanocaldococcus fervens AG86] Length = 566 Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 156/592 (26%), Positives = 265/592 (44%), Gaps = 88/592 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDSVFIAGKGFIN 90 I +++ + G S N L++ L +P IAE IV ++K ++ + A G+IN Sbjct: 25 IKLDKTPNLELGDYSVNICFRLAKELKKNPKVIAEEIVEKLKAMNIEGIKEIKAVNGYIN 84 Query: 91 LYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 Y+ + + ++ I G YG+ KG K+ +E SANP GP+H+GH R A++GD Sbjct: 85 FYIDYNKFAKNLVEEIDKKGNNYGKG-DKKGVKIILEHTSANPNGPLHIGHLRNAIIGDC 143 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP-GVYLKH 208 L ++ F GY+V YY+ND G Q+ + + D + E Y YL+ Sbjct: 144 LKRILEFYGYDVETHYYVNDMGRQMALVVYGIELFGLDKEKKKDHAIAETYVKINKYLEE 203 Query: 209 VGK------ELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDDLKALNIQHDIFI 260 + EL +Y L + + +VK +++V + I++ L LNI+HD F+ Sbjct: 204 HPEEEEKILELMREYEDALEKNEDNE---VVKKFEFAVNYALDGIKETLNNLNIKHDTFV 260 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 E + R +++++ L G V K +T +D + MV Sbjct: 261 WESTYVRN--GMVKEVLKRLMETGKVV-------KEETYM---LDLSDFGIQKKMV---- 304 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 L +++G+ Y D+AY K + D I V+G+DH + ++A + K + Sbjct: 305 ---LARANGTSLYSTRDIAYHLDKLSK-CDIGIDVLGADHKLTAEMVKAALKLLGSKVPE 360 Query: 381 INVLLCELVRLYRDGMPIKMS-------------KRAGDFITLRHVVDEVGSD----SVR 423 V+ E + L M + KRA + R V +E+ D +VR Sbjct: 361 --VIFYEFISLPEGSMSTRRGRFISTDELLEEAIKRAKEECKKRWVEEEIAKDIGLGAVR 418 Query: 424 FMM--------LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA--KDIFP 473 + + + K E LDF+ KV ++QYA+ARC SI ++A K + Sbjct: 419 YNIARISPEKPMIFKWEEALDFE--KV-------GCPFIQYAHARCCSILKEAEKKGVKD 469 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 + FD E E +LI L E+ +I+ + ++ + LA YL +LA VF+ Sbjct: 470 EALFDY----------ELTNEEKELIKMLDEFKDMIKESAENRKVHVLANYLLELAKVFN 519 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++ P L +N K + RL+LV + ++I GL ++G+ P M Sbjct: 520 RFYANC---PILMTKVDDNIKKS--RLKLVKSTKAVIEIGLGLLGINCPGRM 566 >gi|147920891|ref|YP_685302.1| arginyl-tRNA synthetase [uncultured methanogenic archaeon RC-I] gi|121688069|sp|Q0W6L7|SYR_UNCMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|110620698|emb|CAJ35976.1| arginyl-tRNA synthetase [uncultured methanogenic archaeon RC-I] Length = 563 Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 155/590 (26%), Positives = 244/590 (41%), Gaps = 100/590 (16%) Query: 39 DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98 + H +S++ L++ L +P IA IV ++ +D V G +IN Y S Y+ Sbjct: 31 ESQHADVSSSLPFRLAKELKKNPKEIAAAIVEKMGKSEYIDRVEATG-AYINFYASQKYI 89 Query: 99 RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158 L I+ + L G KV +E SANPTGP+HVG R ++GDTLA L+ G Sbjct: 90 TDSLKEILSEKKFF--ELEPNGIKVILEHTSANPTGPLHVGRGRNPIIGDTLARLLRAGG 147 Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQ----ALYNNDSDLPEGYYPGVYLKHV----G 210 Y++ +YY++D G Q T + W Y D+D P+ VY Sbjct: 148 YDLEVQYYVDDMGKQEAT----IVWGYDHLDRIKPGKPDTDKPDHEIVEVYRAATDLRKS 203 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYS--VQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 E +K SE+LN E + V+ ++ + L +N+ +D F+ E DF R Sbjct: 204 DEAVEKEISEILNAYEHMDPATAVKFREMVERCLEGQKMTLARMNVFYDRFVWESDFVRD 263 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 + + LA Y TT+ L + G D + L ++D Sbjct: 264 --GSVNKAVKKLAESQYA-----------TTKDG-----ALALDLSSFGMDKEFVLTRAD 305 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 G+ Y D+A+ K R D I V+G D ++RL A + + EKKA ++ Sbjct: 306 GTSLYTTRDIAFHVWKLAR-CDRAINVLGEDQKLAMQRLNAALSILGEKKAP-TIVFYSF 363 Query: 389 VRLYRDGMPIKMSKRAGDFITL---------------------------RHVVDEVGSDS 421 V L +MS R G + L R + + VG + Sbjct: 364 VSLPEG----RMSTRKGVVVNLDDLLDEAVERAYVEVDKRRKDIPEEKKRQIAEAVGIGA 419 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 VRF ++ + + F + + K+ F +QYA+ARC SI +AK Sbjct: 420 VRFDIVRVAPEKSITFKWETALDFEKQGAPF-IQYAHARCCSILEKAKP----------- 467 Query: 482 RNVIPQESEFDTS------ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 E+D S E L+ +A P VI+NA+ +P+ +A Y +LA F+ Sbjct: 468 -------GEYDASMLREPEEAALVKKIAMMPYVIKNASTELKPHVIAIYARELAEAFNQF 520 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R+ V +L RL LV A + + L ++G+ + EM Sbjct: 521 Y-------RVSPVLIAEPELKEARLALVEASRKALAASLGMLGIAAIEEM 563 >gi|73668541|ref|YP_304556.1| arginyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro] gi|109895000|sp|Q46DR6|SYR_METBF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|72395703|gb|AAZ69976.1| arginyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro] Length = 569 Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 151/588 (25%), Positives = 276/588 (46%), Gaps = 94/588 (15%) Query: 40 CAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD---VDSVFIAGKGFINLYLSPS 96 ++ L++ AA L+ +P +A IV+ ++I PD + V +G +IN + S Sbjct: 34 SSYADLASRAAFRLASLYRQNPKELATRIVSAVEI-PDGSYIGKVSASGP-YINFHASRR 91 Query: 97 YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 Y+ K +++++ ++G K+ +E SANP GP+HVGH R +++GDTLA ++ Sbjct: 92 YMDKTVATVLEEKEKFGCG--APKDKILLEHTSANPNGPLHVGHIRNSIIGDTLARILRR 149 Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALY-NNDSDLPEGYYPGVYLK-HVGKELA 214 +GY+V +YY+ND G QI ++ + R++ L +DS + + VY+K +V + Sbjct: 150 AGYDVEVQYYVNDMGRQIAVVSWAC-ERFELDLSRKSDSAIAD-----VYIKANVELDKN 203 Query: 215 DKYSSELLNFPEEKWLPIVKDY-----SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 +Y E+ E+ VK +V + I++ L LN+ HD F+SE F + Sbjct: 204 PEYVKEIDALMEKVEAGDVKTIDSFYKAVSLAISGIKETLLRLNVVHDKFVSESTFLKS- 262 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC-DMDRKQLLFRSTMVGDDVDRPLLKSD 328 + DI++ + G ++KT + +D F+ T+V + +S+ Sbjct: 263 -GAVHDIVERIKATG----------RTKTDKGALVVDLSDYGFKKTLV-------IQRSN 304 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 G+ Y DLAY + K + D +I + G+DH +L A ++ K+ + V++ E Sbjct: 305 GTSLYTTRDLAYHEWKAGQA-DRIIDIFGADHKLISGQLRATLNSIGVKEPE--VVIFEF 361 Query: 389 VRLYRDGMPIKMSKRAGDFITL---------------------------RHVVDEVGSDS 421 V L MS R G FI+ + V + VG + Sbjct: 362 VSLPEGS----MSTRRGQFISADELFDRVTEAALEQVETRRPETSEEFKKQVAEMVGIGA 417 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP-DLDFDLF 480 VR+ ++ + F++ + + K+ Y+QY++AR SI +AK+ + ++ Sbjct: 418 VRYDIVRVSPEKSTVFNWKEALDFEKQGAP-YIQYSHARACSILEKAKEEAAWNSSAEID 476 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 P ++ + +E+ LI +A + RVI+ A +P+ LA Y +LA F+ + Sbjct: 477 PSLLV------EDTEIDLIKKMASFDRVIDLAARELKPHVLAIYARELADAFNQFY---- 526 Query: 541 ENPRLRFV---QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 RFV A + K+ RL LV+ ++ + L+ +G+ +P M Sbjct: 527 -----RFVPVIAAEDEKVRASRLALVNCARIVLANSLDTLGIAAPESM 569 >gi|76800688|ref|YP_325696.1| arginyl-tRNA synthetase [Natronomonas pharaonis DSM 2160] gi|109895007|sp|Q3IUQ6|SYR_NATPD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|76556553|emb|CAI48124.1| arginine--tRNA ligase [Natronomonas pharaonis DSM 2160] Length = 580 Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 149/554 (26%), Positives = 250/554 (45%), Gaps = 113/554 (20%) Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 ++N + S +Y + L + E L K T V +E SANPTGP+HVG R ++G Sbjct: 84 YLNFFPSEAYFEEALEA---GQSERFGELDSKDTSVVVEHTSANPTGPVHVGRARNPIIG 140 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPE-----GYY 201 D +A+L++++GY+V R YY+NDAG Q ++VF W Y+ ++SDLPE Y Sbjct: 141 DAVANLLSYAGYDVDRHYYVNDAGRQ-----MAVFTWAYETF---DESDLPEPARDRAEY 192 Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS---------VQAMMKIIRDDLKA- 251 V G E + + + E + I++ V ++ + D +KA Sbjct: 193 RMVRYYRKGNEYLENADPDAVEAAEAEIQDILQGLEDGDEATYERVGEVVDTVLDGMKAC 252 Query: 252 ---LNIQHDIFISEDDFHRGDPSPIRDIIDNL-ARQGYVYEGILPPPKSKTTQKCDMDRK 307 L + D F+ E F R D++D L A G VYE D Sbjct: 253 LARLPAEFDEFVKETQFMRD--GSTDDVVDRLQALDGAVYED---------------DAW 295 Query: 308 QLLFRSTMVGDDVDRPL--LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365 QL F D+D+ L L++DG+ Y D+A+ + K++ +D + V+G DH Sbjct: 296 QLAFA------DIDKNLVFLRADGTSLYTTRDIAHHEWKFDT-YDRAVTVLGEDHKLQAS 348 Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------- 416 +L + + Q++ ++ V L KMS R G + L ++DE Sbjct: 349 QLRETLSLLGNDVDQLDNVIYSYVNLPEG----KMSTRRGTGVQLDDLLDEAIDRAREEV 404 Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPV 451 VG +VR+ ++ ++ S+ + F++ + + +++ P Sbjct: 405 ETRLGDRLRDDDLDEADVERIAEQVGIGAVRYDIVAKQPSKAITFEWDRALDFEAQSAP- 463 Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511 YVQY +ARC I +A + P+ + P +++ +E L+ +A P VIE+ Sbjct: 464 -YVQYVHARCCGILDEADGLDPEA-------TIAPLDTD---AERDLLRTVARLPGVIES 512 Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571 A +P+K+A Y LA F+ + RE P A++ ++ RL LV A + Sbjct: 513 AADDHQPHKIATYTRRLADRFNTFY---RECP---VTTADDAEVRRARLALVAAARHAMA 566 Query: 572 SGLNIIGVESPNEM 585 + L+I+GVE+P M Sbjct: 567 NALDILGVEAPESM 580 >gi|292654504|ref|YP_003534401.1| arginyl-tRNA synthetase [Haloferax volcanii DS2] gi|291371974|gb|ADE04201.1| arginyl-tRNA synthetase [Haloferax volcanii DS2] Length = 587 Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 159/614 (25%), Positives = 275/614 (44%), Gaps = 109/614 (17%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGF 88 D + +E P + L+++ A L+ +G P IA I + ++ D + + Sbjct: 25 DDLGVEEPPEDVPATLASSVAFRLAGVVGAPPPKIAADIAEELSVEGYDYLAAVDTQGPY 84 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 +N ++S +Y L + S YGR L G V +E SANPTGP+HVG R V+GD Sbjct: 85 VNFHVSDAYYDDTLDA-AASDEAYGR-LPATGDSVVVEHTSANPTGPVHVGRTRNPVIGD 142 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDS------------D 195 +A+L+ F+G +V R YY+NDAG Q ++VF W Y+ ++ D D Sbjct: 143 AVANLLDFAGNDVDRHYYVNDAGRQ-----MAVFTWAYET--FDEDDLESEPARERVEYD 195 Query: 196 LPEGYYPG-VYLKHVGKELADKYSSELLNF-------PEEKWLPIVKDYSVQAMMKIIRD 247 L Y G +L+ E ++ +E+ EE + + + V ++ +R+ Sbjct: 196 LVRYYRKGNAFLEEADPEEVERAEAEITEILQGIEEGDEETYARV--ETVVDQVLGGMRE 253 Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY-VYEGILPPPKSKTTQKCDMD- 305 L+ L + D F+ E F RD+ + L + VYE + + ++D Sbjct: 254 CLERLPAEFDEFVKETRFMFD--GSTRDLAERLKETDHAVYE--------EDAWQLELDD 303 Query: 306 ---RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH-- 360 K L+F L+SD + Y DLA+ + K++ +D + V+G DH Sbjct: 304 YGFEKNLVF-------------LRSDDTSLYTTRDLAHHEWKFD-NYDRAVTVLGEDHKL 349 Query: 361 -SGY-----------VKRLEAV---------AAAVSEKKAQ---INVLLCELVRLYRDGM 396 SG V +LE V +S +K ++ LL E + RD + Sbjct: 350 QSGQLRAALDILGNDVDKLENVIYSWVNLPGGETMSTRKGTGVMLDDLLDEAIDRARDEV 409 Query: 397 PIKMSKRA----GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPV 451 ++ R D + + +VG +VR+ ++ ++ ++ + F++ + +++ P Sbjct: 410 ETRLEGRTRDDDLDEADIDRIARQVGIGAVRYDIVSKQPTKTITFEWDQALNFEAQSAP- 468 Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511 Y+QY +ARC I +A LD V+ ++E D L+ +A +P V+E Sbjct: 469 -YIQYVHARCCGIADEAA--TAGLDASEADPAVLTTDAERD-----LLATIARFPAVVET 520 Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571 A EP+ +A + +LA VF+ + RE P L + ++ RL LV A + + Sbjct: 521 AADDLEPHTVATFARELAEVFNTFY---RECPVLD----ADEEVGAARLALVEASRNAVA 573 Query: 572 SGLNIIGVESPNEM 585 + L I+GVE+P M Sbjct: 574 NALAIVGVEAPESM 587 >gi|167946398|ref|ZP_02533472.1| arginyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 228 Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 79/216 (36%), Positives = 120/216 (55%), Gaps = 18/216 (8%) Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 + ++ IRDDL + +D + SE + + I+ L G+VYE Sbjct: 31 GLNTILDDIRDDLSLFGVNYDEWYSERSLT--ESGAVNKAIERLRGSGHVYE-------- 80 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 L F+ST GD+ DR +++ +G TYFA+D+AY K ERGF+ +I + Sbjct: 81 --------KNGALWFKSTDYGDEKDRVVVRDNGQTTYFASDIAYHMDKLERGFERVIDIW 132 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G+DH GYV R++A AV + ++++VLL + LYR G +MS R+G+F+TLR + E Sbjct: 133 GADHHGYVPRVKAAMQAVGDDPSKLDVLLVQFAILYRGGEKAQMSTRSGEFVTLRELRKE 192 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 VG+D+ RF + RK + LDFD K QS +NPV+ Sbjct: 193 VGTDAARFFYVMRKCEQHLDFDLDLAKSQSSDNPVY 228 >gi|88604070|ref|YP_504248.1| arginyl-tRNA synthetase [Methanospirillum hungatei JF-1] gi|109895001|sp|Q2FS66|SYR_METHJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|88189532|gb|ABD42529.1| arginyl-tRNA synthetase [Methanospirillum hungatei JF-1] Length = 555 Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 149/583 (25%), Positives = 246/583 (42%), Gaps = 96/583 (16%) Query: 42 HGHLSTNAAMILSRPLGLDPLTIAELIVARI--KIDPDVDSVFIAGKGFINLYLSPSYLR 99 H +++ A L++ L P IA+ I I ++ + + A ++N Y Sbjct: 30 HADVASTIAFSLAKELRKAPAIIAQEIAGAISDQVMAETGAETRAVGPYVNFIFGAEYCM 89 Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 +L V G G+ K +V +E SANP GP+HVGH R ++GDTLA +GY Sbjct: 90 NVLEQAVREGYGKGQE---KSERVVLEHTSANPNGPLHVGHIRNTIIGDTLARCFRKAGY 146 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL---KHVGKELA-D 215 + +YY+ND G QI +A + + D VY+ +H+ KE A + Sbjct: 147 PLEVQYYVNDMGRQIAIVAWGIATQGADIHAEGKGD---HLIADVYIEANRHLEKEPALN 203 Query: 216 KYSSELLNFPEEKWLPIVKDYS--VQAMMKIIRDDLKALNIQHDIFISEDDFHR-GDPSP 272 L+ E + + V+ + +D L A++++HD FI E DF R GD + Sbjct: 204 AEIDRLMQLVESGDPDTISQFKIPVKRCLDGFKDTLAAMHVKHDRFIYESDFIRNGDTAK 263 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + I +L P+++ + +D F + L +SDG+ Sbjct: 264 VLSRISHL-------------PEARIEETLSLDLSAFGFEKNYI-------LRRSDGTSV 303 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 Y A D+A+ K FD +I V+G+DH +L+A + E+ +I + E V L Sbjct: 304 YAARDIAFHIWK-GHNFDRVIDVLGADHKLIGTQLQATLEILGERVPEI--VFFEFVSLP 360 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM--LWRKNSELLDFDFCKVKEQ----- 445 MS R G FI+ DE+ +++ R M + + SEL + + K+ Sbjct: 361 EG----SMSTRKGKFIS----ADELIAETERRAMEEVTARRSELSEEERKKIAHSVAISA 412 Query: 446 ---------SKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 +++ VF Y+QYA+AR SI +A+ P + Sbjct: 413 IRYDIIRTIPEKSTVFDWKEALDFEKQSGPYIQYAHARACSILEKAESYTPCFE------ 466 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 E E E+ L +A +P+VI +P+ LA Y +LA +F+ + Sbjct: 467 ----AEGE---GEIALTKQIALFPKVITEVVTELKPHLLAIYARELADIFNSFY---HAE 516 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P LR K+ RL LV A + + L +G+++ M Sbjct: 517 PVLR----AEGKIRDRRLTLVDATRNTLKEALETLGIDALRAM 555 >gi|167945582|ref|ZP_02532656.1| arginyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2'] gi|110589102|gb|ABG77060.1| arginyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 188 Score = 142 bits (359), Expect = 1e-31, Method: Composition-based stats. Identities = 67/145 (46%), Positives = 95/145 (65%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 IER RD HG +TN A++L++P P +AE ++A + ++ IAG GFIN YL Sbjct: 32 IERARDPRHGDFATNVALVLAKPARSKPRDLAEKLMAALPASAMIEKTEIAGPGFINFYL 91 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 S ++ +I+ G +YGR+ +G+G +V +EFVSANPTGP+HVGH R A G +A L Sbjct: 92 SADAYHALVPAILEQGPDYGRSDLGQGKRVQVEFVSANPTGPLHVGHGRGAAYGSVVADL 151 Query: 154 MAFSGYEVTREYYINDAGAQINTLA 178 +A GY+V REYY+NDAG Q++ L Sbjct: 152 LAAVGYDVHREYYVNDAGRQMDILG 176 >gi|91773687|ref|YP_566379.1| arginyl-tRNA synthetase [Methanococcoides burtonii DSM 6242] gi|121691659|sp|Q12V97|SYR_METBU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|91712702|gb|ABE52629.1| Arginyl-tRNA synthetase [Methanococcoides burtonii DSM 6242] Length = 567 Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 152/605 (25%), Positives = 260/605 (42%), Gaps = 132/605 (21%) Query: 42 HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD--VDSVFIAGKGFINLYLSPSYLR 99 H LS+ A L+ P +AE I I I V+ V G ++N++ +++ Sbjct: 34 HADLSSRIAFRLASVAKQSPKDVAEKIAGEIVIPKGSFVEKVEALGP-YLNIWAGRNFIE 92 Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 + +I +G N ++ +E SANP GP+HVGH R +++GDTL ++ +GY Sbjct: 93 GTVLAIREQKEAFGGNF--SEGRILLEHTSANPNGPLHVGHIRNSIIGDTLGRILKRAGY 150 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 +V YY+ND G QI ++ ++ + ++S P+ VY+ K ++ Sbjct: 151 DVELHYYVNDMGRQIAIVSWALGY-----FEFDESSKPDHAIADVYI---------KANA 196 Query: 220 ELLNFPE-----EKWLPIVK----------DYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 EL PE +K + +V+ D +V + I++ LK +N+ HD F E Sbjct: 197 ELNAHPEKVAEIDKLMQLVEKGDAATIETFDKAVDLAVSGIKETLKKMNVAHDEFPKESS 256 Query: 265 FHR-GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL-------FRSTMV 316 F R GD S I + I K T + ++D L+ F+ T+V Sbjct: 257 FIRSGDVSRIIEEI-------------------KATGRTEIDNGALVVNLQDYGFKKTLV 297 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 + ++DG+ Y DLAY + K ER D +I V G+DH +L+A A+ + Sbjct: 298 -------IQRTDGTSLYTTRDLAYHEWKGERA-DRIIDVFGADHKLISGQLKATLNAIGK 349 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416 K+ + ++ E V L MS R+G FI+ ++D+ Sbjct: 350 KEPEF--VIFEFVSLPEG----SMSTRSGKFISADDLLDQIKTQAYEEVDKRRPDMPDDF 403 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 VG +VR+ ++ + FD+ + + K+ F +QY++AR SI ++AK Sbjct: 404 KATVAEIVGIGAVRYDIVKVSPEKSTVFDWKEALDFEKQGGPF-IQYSHARACSILQKAK 462 Query: 470 DIFPDLDFDLFPRNVIPQESEFDT------SELQLIVHLAEYPRVIENATIAQEPYKLAF 523 D + E +T SE+ LI +A + +++ P+ A Sbjct: 463 D-----------EGLWSSEEPINTTLLVEDSEVSLIKKMAMFDNMLDQCAKELRPHTFAI 511 Query: 524 YLYDLASVFHGHWSHGRENPRLRFV---QANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 Y +LA F N RFV A + +L R+ LV ++ + L+ +G+ Sbjct: 512 YARELADAF---------NQFYRFVSVLNAEDEQLRSSRIALVDCARMVLANTLDTLGLG 562 Query: 581 SPNEM 585 +P M Sbjct: 563 APESM 567 >gi|222445526|ref|ZP_03608041.1| hypothetical protein METSMIALI_01166 [Methanobrevibacter smithii DSM 2375] gi|222435091|gb|EEE42256.1| hypothetical protein METSMIALI_01166 [Methanobrevibacter smithii DSM 2375] Length = 575 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 158/598 (26%), Positives = 267/598 (44%), Gaps = 107/598 (17%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +E P + G L++ A L++ L P IA IV +++I P++ A ++N ++ Sbjct: 39 LEFPPNPDMGDLASTIAFSLAKKLRKAPNLIASEIVEKLEI-PEIFEKVEAIGPYVNFFI 97 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 S K L V G +YG+ L K+ +E SANP GP+H+GH R ++ GD+L L Sbjct: 98 DYSNFSKKLLEYV--GKDYGQ-LPKADEKIILEHTSANPNGPLHIGHVRNSIFGDSLNRL 154 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY--NNDSDLPEGYYPGVYLKHVGK 211 + +G EV +YY+ND G QI A+ VF + L + + D + +Y K K Sbjct: 155 LKVAGREVETQYYVNDMGRQI---AIIVFGITELGLKIEDQEGDKIDHKIGRLYFKANQK 211 Query: 212 ELADK-YSSELLNFPE------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 D+ S + N E E L + + V++ + I++ L +NI HD F+ E Sbjct: 212 LNEDESLVSHVDNLIERYEGGAEPELNKIFEEVVESCLLGIKETLHRININHDDFVWEGQ 271 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 F R + D+I +G+V G + + C K+ + R Sbjct: 272 FVRS--GEVDDMIKYFDHEGFVSYGDV----TYIDLTCFQIEKEFVLR------------ 313 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 +SDG+ Y DLAY + K +G D ++ ++GSDH +L A QINV+ Sbjct: 314 -RSDGTSLYSTRDLAYHRYKATQG-DVVLDILGSDH-----KLAA---------QQINVI 357 Query: 385 LCELVR------LYRDGMPI---KMSKRAGDFITLRHVVDE------------------- 416 E++R ++ + + + MS R G F+++ +VDE Sbjct: 358 FKEILREIPPEVIFYEFITLPSGSMSTRKGVFVSVDELVDEAVKRAADEIKSRNPDLTDE 417 Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQ 467 +G ++RF + + L F + + S E +QYA+AR C+ + + Sbjct: 418 EIKPMAEDIGVGAIRFFIAKLSPEKHLTFKWDEA--LSFERGCASIQYAHARACKLLKKS 475 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 KD+ D + +P E+E D LI +A++P+VIE+ + + + Y D Sbjct: 476 GKDVSSLAVSD----DWVPNENEKD-----LIRTIAKFPQVIEDCANKKRIHNITQYCQD 526 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LAS F+ + + Q + RL LV + + + L+I+GV +P +M Sbjct: 527 LASAFNKFY---------KAEQVIGSDVEDTRLVLVDRAKTTLKNALDILGVPAPQKM 575 >gi|261349916|ref|ZP_05975333.1| arginine--tRNA ligase [Methanobrevibacter smithii DSM 2374] gi|288860699|gb|EFC92997.1| arginine--tRNA ligase [Methanobrevibacter smithii DSM 2374] Length = 575 Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 158/598 (26%), Positives = 267/598 (44%), Gaps = 107/598 (17%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +E P + G L++ A L++ L P IA IV +++I P++ A ++N ++ Sbjct: 39 LEFPPNPDMGDLASTIAFSLAKKLRKAPNLIASEIVEKLEI-PEIFEKVEAIGPYVNFFI 97 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 S K L V G +YG+ L K+ +E SANP GP+H+GH R ++ GD+L L Sbjct: 98 DYSNFSKKLLEYV--GKDYGQ-LPKADEKIILEHTSANPNGPLHIGHVRNSIFGDSLNRL 154 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY--NNDSDLPEGYYPGVYLKHVGK 211 + +G EV +YY+ND G QI A+ VF + L + + D + +Y K K Sbjct: 155 LKVAGREVETQYYVNDMGRQI---AIIVFGITELGLKIEDQEGDKIDHKIGRLYFKANQK 211 Query: 212 ELADK-YSSELLNFPE------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 D+ S + N E E L + + V++ + I++ L +NI HD F+ E Sbjct: 212 LNEDESLVSHVDNLIERYEGGAEPELNKIFEEVVESCLLGIKETLHRININHDDFVWEGQ 271 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 F R + D+I +G+V G + + C K+ + R Sbjct: 272 FVRS--GEVDDMIKYFDHEGFVSYGDV----TYIDLTCFQIEKEFVLR------------ 313 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 +SDG+ Y DLAY + K +G D ++ ++GSDH +L A QINV+ Sbjct: 314 -RSDGTSLYSTRDLAYHRYKATQG-DVVLDILGSDH-----KLAA---------QQINVI 357 Query: 385 LCELVR------LYRDGMPI---KMSKRAGDFITLRHVVDE------------------- 416 E++R ++ + + + MS R G F+++ +VDE Sbjct: 358 FKEILREIPPEVIFYEFITLPSGSMSTRKGVFVSVDELVDEAVKRATDEIKSRNPDLTDE 417 Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQ 467 +G ++RF + + L F + + S E +QYA+AR C+ + + Sbjct: 418 EIKPMAEDIGVGAIRFFIAKLSPEKHLTFKWDEA--LSFERGCASIQYAHARACKLLKKS 475 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 KD+ D + +P E+E D LI +A++P+VIE+ + + + Y D Sbjct: 476 GKDVSSLAVSD----DWVPNENEKD-----LIRTIAKFPQVIEDCANKKRIHNITQYCQD 526 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LAS F+ + + Q + RL LV + + + L+I+GV +P +M Sbjct: 527 LASAFNKFY---------KAEQVIGSDVEDTRLVLVDRAKTTLKNALDILGVPAPQKM 575 >gi|159906015|ref|YP_001549677.1| arginyl-tRNA synthetase [Methanococcus maripaludis C6] gi|238686996|sp|A9AAS2|SYR_METM6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|159887508|gb|ABX02445.1| arginyl-tRNA synthetase [Methanococcus maripaludis C6] Length = 566 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 156/609 (25%), Positives = 267/609 (43%), Gaps = 122/609 (20%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID--PDVDSVFIAGKGFI 89 I +E P G STN + L++ L P IAE I + I +++V G+I Sbjct: 25 IRLEEPPAINMGDYSTNISFRLAKDLKKAPKMIAEDIANSLSISGIERIEAV----NGYI 80 Query: 90 NLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 N +++ P + ++ +S I +G+ L +G KV +E SANP GP H+GH R V+GD Sbjct: 81 NFFMNYPDFSKETVSKITSEKENFGK-LEKRGEKVILEHTSANPNGPFHIGHGRNMVIGD 139 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---DSDLPEGYYPGVY 205 +L ++ SGY+V +YY+ND G Q A+ VF + L + D + E Y Sbjct: 140 SLKRILIASGYDVETQYYVNDMGRQ---EAIVVFGNERFELDKSKKADHAIGEVYVETNK 196 Query: 206 LKHVGKELADKYSSELLNFPE-----------EKWLPIVKDYSVQAMMKIIRDDLKALNI 254 L +EL + + + N+ EK+ V DYS+ ++ L LNI Sbjct: 197 LLAENEELEQEILNLMKNYESACEAGIENELTEKFKNAV-DYSLGGF----KETLSTLNI 251 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 HD F+ E +F + +RD+I L G V E +FR Sbjct: 252 YHDKFVWESEFVKS--GMVRDVIKRLMDTGKVVE-------------------DEVFRLD 290 Query: 315 MVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372 + +++ L+ + +G+ Y D+AY K E D + ++G+DH + A Sbjct: 291 LSDYGLEKKLVLARLNGTSLYSTRDIAYHINKME-NCDFAVNLLGADHKLTAVLVNKTLA 349 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS------------- 419 + +A+ V+ E + L MS R G FI++ + +E S Sbjct: 350 LLGYNEAE--VVFYEFISLPEGS----MSTRRGRFISMDELFEEAKSRAAEEVRKRGVAQ 403 Query: 420 --------------DSVRFM---------MLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456 +VR+ M++R + E LDF+ PV +QY Sbjct: 404 SEEEIEEIAKKIAVGAVRYNIVRIAPEKPMVFRWD-EALDFEKVGC-------PV--IQY 453 Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 A+ARC I ++I D +LF E + +E ++ L++ P+++E A + Sbjct: 454 AHARCSRILENVENISND---NLFAY-------EMNENEKTIVKLLSKLPKIVEKAAEVR 503 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 +P +A Y+ D+A F+ +++ P L+ N + RL +V +++ + L++ Sbjct: 504 KPQIVANYVLDVAQGFNKFYANC---PVLK---EENETIKNSRLAIVSTTKTVLENTLDL 557 Query: 577 IGVESPNEM 585 +G+E P +M Sbjct: 558 LGIEMPGKM 566 >gi|319955938|ref|YP_004167201.1| arginyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511] gi|319418342|gb|ADV45452.1| arginyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511] Length = 565 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 160/573 (27%), Positives = 253/573 (44%), Gaps = 83/573 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AM L++ LG +P IA+ IV + +P + IAG GFINL LSP +L L Sbjct: 36 GDYQFNGAMPLAKKLGKNPRQIAQEIVEALPENPILSKAEIAGPGFINLTLSPKWLAARL 95 Query: 103 SSIVV-SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161 + GR + +V +++ S N MHVGH R ++GD+LA+L AF G EV Sbjct: 96 EEAARDERLGVGRQ--SEPKRVVVDYSSPNMAKQMHVGHLRSTIIGDSLANLFAFLGDEV 153 Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221 R+ +I D G Q L + +L EG ++ +L + Y + Sbjct: 154 IRQNHIGDWGTQFGMLIAYL------------EELGEGAEGSLH------DLEEFYKAAK 195 Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281 F E+ D S + ++K+ D+K L++ + FI + H + + L Sbjct: 196 KRFDEDAAFA---DKSREYVVKLQGGDVKCLHLWEN-FIDKSLGHCEEVYSKLHV--RLT 249 Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS----TMVGDDVDRPLL--KSDGSYTYFA 335 R+ E K + D+ K LL S + DD + PL+ KSDG + Y Sbjct: 250 REDVKAESSYNDDLQKIVE--DLQAKGLLKESRGAKVVFTDDEENPLIIQKSDGGFLYAT 307 Query: 336 ADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAA-------VSEKKAQINVLLCE 387 DLA + + E G + YV+ + +G+ K++ AVA V + ++L + Sbjct: 308 TDLAAIRFRVKELGAKRISYVVDARQAGHFKQVFAVARMAGYAPEDVRLEHVSFGMMLDK 367 Query: 388 LVRLY--RDGMPIKM-------SKRAGDFITLRHVVDE---------VGSDSVRF--MML 427 R + RDG +K+ +RA IT R DE VG +V++ + + Sbjct: 368 SGRPFKTRDGGTVKLIDLLDEAVERAKGAITQREAYDEEELEKIAEIVGIGAVKYSDLSI 427 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487 R+++ + D+D E N Y QYAYAR RSIFR+ + + + Sbjct: 428 NRESNYIFDWDRMLSLEG---NTSLYQQYAYARIRSIFRK------------YDGTIEGK 472 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 D E +L + L + V+ A P+ + YLYDLA++F + + NP LR Sbjct: 473 VQLGDELERRLALKLLQLEDVLRAAAREAMPHYITGYLYDLATLFMKFYEN---NPILR- 528 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 +L RLQL + A + L I+G++ Sbjct: 529 -SDVPEELRQSRLQLAKSTADTLKLALEILGIK 560 >gi|15679444|ref|NP_276561.1| arginyl-tRNA synthetase [Methanothermobacter thermautotrophicus str. Delta H] gi|3334359|sp|O27496|SYR_METTH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|2622560|gb|AAB85922.1| arginyl-tRNA synthetase [Methanothermobacter thermautotrophicus str. Delta H] Length = 560 Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 155/613 (25%), Positives = 265/613 (43%), Gaps = 121/613 (19%) Query: 23 KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82 K+ K+ I +E P + G L++ + L+ L P+ I I++ I+ P++ Sbjct: 19 KLGIKVPPEIKLEEPPNPQLGDLASTVSFELAGKLRRAPIEITADIMSVIET-PEIFETI 77 Query: 83 IAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 + +IN ++ + ++L SI +YG + + +V +E SANP GP+H+GH Sbjct: 78 ESKGPYINFFVDYGRFSSRLLESI---QDDYGSH-PPRDERVILEHTSANPNGPLHIGHI 133 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYY 201 R A++GD+LA ++ +GY+V +YY+ND G QI + W L N D DL + Y Sbjct: 134 RNAIIGDSLARILRMAGYDVETQYYVNDMGRQIAM----IVW----GLLNLDGDLED--Y 183 Query: 202 PGVYLKH-VGK--------------------ELADKYSSELLNFPEEKWLPIVKDYSVQA 240 PG + H VGK EL KY + E+ V +Y + Sbjct: 184 PGDKMDHRVGKLYFEVNQRLKENPGIRDEVDELIRKYEA----GENEELFRKVVEYCLSG 239 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 M + +K L++ HD F+ E F R + +I++L + GY E Sbjct: 240 M----EETMKRLHVHHDRFVWEGQFVRD--GTVDRVIESLRKTGYTGE----------ND 283 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 +D ++ +V L +SDG+ Y D+AY K E G D +I V+GSDH Sbjct: 284 VLYLDLEEFGLEKELV-------LTRSDGTSLYSTRDIAYHLQKSEEG-DVIIDVLGSDH 335 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 +++ + K+ + V+ E + L MS R G FI++ ++DE S Sbjct: 336 KLAAEQVGIAVELLGGKRPE--VIFYEFITLPEG----SMSTRRGVFISVDELMDEAHS- 388 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY--------------------------- 453 R + +K +L D + E + Y Sbjct: 389 --RALHEVKKRRDLPDDVADDIAESIGNGAIRYYIARLSPEKHIVFRWDDALSFERGCAS 446 Query: 454 VQYAYAR-CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 +QYA+AR C+ + + + D++ P + E +L+ LA +P V+E + Sbjct: 447 IQYAHARACKLLEKASFTGEEDIEDGWKP----------EGDERELVRLLARFPVVVEES 496 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572 +A+ + +A Y DLA+ F+ + R P + RL+LV +V + + Sbjct: 497 ALARRVHPVAQYAQDLANTFNSFY---RSTPVI------GSDFEGARLRLVDSVRKTLRN 547 Query: 573 GLNIIGVESPNEM 585 LN++G+ +P M Sbjct: 548 ALNLLGIHAPETM 560 >gi|21227450|ref|NP_633372.1| arginyl-tRNA synthetase [Methanosarcina mazei Go1] gi|23822188|sp|Q8PX74|SYR_METMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|20905820|gb|AAM31044.1| Arginyl-tRNA synthetase [Methanosarcina mazei Go1] Length = 569 Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 152/587 (25%), Positives = 266/587 (45%), Gaps = 96/587 (16%) Query: 42 HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD---VDSVFIAGKGFINLYLSPSYL 98 H L++ AA L+ +P +A IV+ ++I P+ + V AG +IN + YL Sbjct: 36 HADLASRAAFRLAGIHRQNPKDLASRIVSAVEI-PEGSFIGKVSAAGP-YINFFAGKHYL 93 Query: 99 RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158 +++++ ++G ++ +E SANP GP+HVGH R +++GDTLA ++ +G Sbjct: 94 NGTVNAVLKEKEKFGCG--APKDRILLEHTSANPNGPLHVGHIRNSIIGDTLARILRRAG 151 Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALY-NNDSDLPEGYYPGVYLK-HVGKELADK 216 Y+V +YY+ND G QI ++ + R++ L +DS + + VY+K +V + Sbjct: 152 YDVEVQYYVNDMGRQIAVVSWAC-ERFELDLSRKSDSAIAD-----VYIKANVELDKNPG 205 Query: 217 YSSELLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 Y E+ E+ V+ D +V + I++ L LN+ HD F+SE F + Sbjct: 206 YIKEIDALMEKVEAGDVRTIEHFDKAVSLAVAGIKETLLRLNVAHDKFVSESTFLKS--G 263 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + DI++ + K T + D+ L+ + G + + +S+G+ Sbjct: 264 AVHDIVERI----------------KATGRTKTDKGALVVDLSDYGFEKTLVIQRSNGTS 307 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 Y DLAY + K + D +I V G+DH +L A A+ K+ + V++ E V L Sbjct: 308 LYTTRDLAYHEWKAGQA-DRIIDVFGADHKLISGQLRATLNAIGVKEPE--VVIFEFVSL 364 Query: 392 YRDGMPIKMSKRAGDFITL---------------------------RHVVDEVGSDSVRF 424 MS R G FI+ + V + VG +VR+ Sbjct: 365 PEGS----MSTRRGQFISADDLFDRVTGAAFEQVETRRPETSYEFKKQVAEAVGLGAVRY 420 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF---PDLDFDLFP 481 ++ + F++ + + K+ Y+QY++AR SI +AK+ PD + D P Sbjct: 421 DIVRVSPEKSTVFNWKEALDFEKQGAP-YIQYSHARACSILEKAKEEAAWNPDKEID--P 477 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 ++ + SE+ LI +A + VI+ +P+ LA Y +LA F Sbjct: 478 SLLV------EDSEIDLIKKMAMFDSVIDLGARELKPHVLAIYARELADAF--------- 522 Query: 542 NPRLRFV---QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N RFV A + + RL LV ++ + L+ +G+ +P M Sbjct: 523 NQFYRFVPVIAAEDENVRAARLALVDCARVVLANSLDTLGIIAPESM 569 >gi|116753536|ref|YP_842654.1| arginyl-tRNA synthetase [Methanosaeta thermophila PT] gi|121694355|sp|A0B5P0|SYR_METTP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|116664987|gb|ABK14014.1| arginyl-tRNA synthetase [Methanosaeta thermophila PT] Length = 558 Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 170/626 (27%), Positives = 273/626 (43%), Gaps = 111/626 (17%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCA-----HGHLSTNAAMILSRPL 57 +F DF S ++ LKE LDR + P + + H LST A LS L Sbjct: 1 MFLDFMSEVEGILKEG----------LDRCGLSVPLENSLDLSPHADLSTTIAFRLSPVL 50 Query: 58 GLDPLTIAELIVARIKIDPD--VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115 DP +A I + P VD + G +IN Y+S ++L +++ +GR Sbjct: 51 RKDPKDVAAEIYNSMG-SPSRWVDRAELVGP-YINFYMSRNFLDNVVTKAQGEDAWWGR- 107 Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175 + V +E SANP GP+HVGH R +V+GDT+ ++ +GY V +YY+ND G Q Sbjct: 108 ---RSGSVVVEHTSANPDGPLHVGHIRNSVIGDTIVRILRRAGYNVEAQYYVNDMGRQTA 164 Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLK-----HVGKELADKYSSELLNFPEEKWL 230 V W + D P+ VY+ + EL+ + EL+ E + Sbjct: 165 M----VVWGCDH--LDLDDSKPDHAIARVYIAAHKIMNEKPELSAEV-DELMRRYESRDP 217 Query: 231 PIVKDYSVQAMMKI--IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG--YV 286 IVK + A I I L +NI HD + E +F + +I++ L R G + Sbjct: 218 EIVKKFQRAARYAISGIERTLHRMNIHHDSYKWESEFVWD--GSVDEILEMLERTGRTVL 275 Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346 +G L +D + F ++V L ++DG+ Y DLAY K K E Sbjct: 276 KDGAL-----------QLDLSEEGFEKSLV-------LRRADGTTLYTTRDLAYHKWKAE 317 Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406 ++ ++ V+G+DH +L + + V++ E V L DG MS R G Sbjct: 318 -NYERVVEVLGADHKLISAQLRTALRMLG--IGEPEVVIFEFVSL-PDG---SMSTRRGK 370 Query: 407 FITLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDF 439 FI+ ++DE V +VR+ ++ + FD+ Sbjct: 371 FISADELLDEVEKQAYLEVTKRRPEMDEEFRRDVAGKVAVGAVRYDIVRVSADKATTFDW 430 Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 + K + F +QY++AR SI +A ++ D F ++ D E+ LI Sbjct: 431 KTALDFEKLSAPF-IQYSHARACSIINKAGEL------DEFDPGLLR-----DDYEIALI 478 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 +AE+ VIE A +P++LA Y +LA F+ + R +P L A +L R Sbjct: 479 KKIAEFDLVIERAARELKPHQLATYARELAERFNLFY---RYDPVL---DAKPVELRNAR 532 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L LV A + +++ L+ +G+++P M Sbjct: 533 LGLVRASRNALSATLDTLGIDAPESM 558 >gi|298673986|ref|YP_003725736.1| arginyl-tRNA synthetase [Methanohalobium evestigatum Z-7303] gi|298286974|gb|ADI72940.1| arginyl-tRNA synthetase [Methanohalobium evestigatum Z-7303] Length = 563 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 141/581 (24%), Positives = 257/581 (44%), Gaps = 86/581 (14%) Query: 42 HGHLSTNAAMILSRPLGLDPLTIAELI--VARIKIDPDVDSVFIAGKGFINLYLSPSYLR 99 H +++N A L+ +P IAE I A I + + + G ++N + YL Sbjct: 32 HSDVASNVAFRLASKYRQNPKDIAEKIGNTAVIGDKSYIGKMEVTGP-YLNFWAKRDYLD 90 Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 + I + N + +E SANP GP+HVGH R +V+GDTL+ ++ +GY Sbjct: 91 DTVLKIRKEKENFASNF--SSGDIILEHTSANPNGPLHVGHIRNSVIGDTLSRVLKHAGY 148 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 V +YY+ND G QI ++ W + + ++S + +Y+K +EL S Sbjct: 149 NVRTQYYVNDIGRQIAIVS----WGLKNFGF-DESKKSDHAIADLYIKS-NQELEKDTSK 202 Query: 220 --------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 +++ +E + I D SV+ ++ + LK LN+ HD F+ E +F R Sbjct: 203 VQDIDSLMQMVENGDEDTIKIF-DESVRYSLEGTKQTLKTLNVSHDEFVYESEFIRN--G 259 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + I++ L K+T +MD L+ + G + + +SDG+ Sbjct: 260 SVSKIVNEL----------------KSTGHTEMDNGALVVDLSGYGFEKQLVIQRSDGTS 303 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 Y DLAY + K D +I ++G+DH +L+A + +K+ + V++ E V L Sbjct: 304 LYTTRDLAYHEQKSAES-DRVIDILGADHKLVSSQLKATMNLLDKKEPE--VVIFEFVSL 360 Query: 392 YRDGMPIKMSKRAGDFITL---------------------------RHVVDEVGSDSVRF 424 MS R G FIT + + D+VG +VR+ Sbjct: 361 PEGS----MSTRKGKFITADDVFDKVKSQAYKEVDKRRPDMPADFKKEISDQVGMGAVRY 416 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 ++ + FD+ K + K+ Y+QY++AR +I ++A+ + P + Sbjct: 417 DIISVSPEKSTVFDWKKALDFEKQGGP-YIQYSHARACNILKKAETFWN-------PEDA 468 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 + + E+ LI +A++ ++I+ + +P+ +A Y +LA F+ + + N Sbjct: 469 VNPSVLVEDDEVALIKKMAKFDQMIDQSAKELKPHTVATYARELADDFNQFYRYVPVNS- 527 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A + ++ RL LV ++ + L I+G+ +P M Sbjct: 528 -----AEDDEVRNARLGLVDCARIMLANTLYILGISAPESM 563 >gi|148643291|ref|YP_001273804.1| arginyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061] gi|166232806|sp|A5UMK8|SYR_METS3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|148552308|gb|ABQ87436.1| arginyl-tRNA synthetase, ArgS [Methanobrevibacter smithii ATCC 35061] Length = 575 Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 157/598 (26%), Positives = 266/598 (44%), Gaps = 107/598 (17%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +E P + G L++ A L++ L P IA IV +++I P++ A ++N ++ Sbjct: 39 LEFPPNPDMGDLASTIAFSLAKKLRKAPNLIASEIVEKLEI-PEIFEKVEAIGPYVNFFI 97 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 S K L V G +YG +L K+ +E SANP GP+H+GH R ++ GD+L L Sbjct: 98 DYSNFSKKLLEYV--GKDYG-HLPKADEKIILEHTSANPNGPLHIGHVRNSIFGDSLNRL 154 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY--NNDSDLPEGYYPGVYLKHVGK 211 + +G EV +YY+ND G QI A+ VF + L + + D + +Y K K Sbjct: 155 LKVAGREVETQYYVNDMGRQI---AIIVFGITELGLKIEDQEGDKIDHKIGRLYFKANQK 211 Query: 212 ELADK-YSSELLNFPE------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 D+ S + N E E L + + V++ + I++ L +NI HD F+ E Sbjct: 212 LNEDESLVSHVDNLIERYEGGAEPELNKIFEEVVESCLLGIKETLHRININHDDFVWEGQ 271 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 F R + D+I +G+V G + + C K+ + R Sbjct: 272 FVRS--GEVDDMIKYFDHEGFVSYGDV----TYIDLTCFQIEKEFVLR------------ 313 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 +SDG+ Y DLAY + K +G D ++ ++GSDH +L A QINV+ Sbjct: 314 -RSDGTSLYSTRDLAYHRYKATQG-DVVLDILGSDH-----KLAA---------QQINVI 357 Query: 385 LCELVR------LYRDGMPI---KMSKRAGDFITLRHVVDE------------------- 416 E++R ++ + + + MS R G F+++ +VDE Sbjct: 358 FKEILREIPPEVIFYEFITLPSGSMSTRKGVFVSVDELVDEAVKRAADEIKSRNPDLTDE 417 Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CRSIFRQ 467 +G ++RF + + L F + + S E +QYA+AR C+ + + Sbjct: 418 EIKPMAEDIGVGAIRFFIAKLSPEKHLTFKWDEA--LSFERGCASIQYAHARACKLLKKS 475 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 KD+ D + +P E+E D LI +A++P+VIE+ + + + Y D Sbjct: 476 GKDVSSLAVSD----DWVPNENEKD-----LIRTIAKFPQVIEDCANKKRIHNITQYCQD 526 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA F+ + + Q + RL LV + + + L+I+GV +P +M Sbjct: 527 LAGAFNKFY---------KAEQVIGSDVEDTRLVLVDRAKTTLKNALDILGVPAPQKM 575 >gi|212223653|ref|YP_002306889.1| arginyl-tRNA synthetase [Thermococcus onnurineus NA1] gi|212008610|gb|ACJ15992.1| arginyl-tRNA synthetase [Thermococcus onnurineus NA1] Length = 642 Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 168/633 (26%), Positives = 269/633 (42%), Gaps = 124/633 (19%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLS-PSYLRK 100 G +T + L+R P IAE IV RIK P S A G+IN YL+ ++ + Sbjct: 44 GDFATTVSFQLARVFRKAPKLIAEEIVERIKDKLPGEVSDVKAVNGYINFYLNYEAFGKD 103 Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 ++S I+ G YG + GKG KV +E S NPT P+H+GH R AV+GDT+A +M GY Sbjct: 104 LVSEILKRGEHYGESEFGKGRKVIVEHTSVNPTKPLHMGHARNAVLGDTMARIMRALGYN 163 Query: 161 VTREYYINDAGAQINTLALSVFWRY---QQALYNNDSDLPEGYYPGVYLKHV-------- 209 V + YI+D G Q V W Y ++ +++L E + HV Sbjct: 164 VEVQNYIDDLGVQF----AQVLWGYLNLKEEFERLEAELREKGVKEDVIDHVMGLLYVEV 219 Query: 210 -----GKELADKYSSELLNFPEEKWLPIVK------DYSVQA-MMKIIRDDLKALNIQHD 257 G DK EL+ EE I + + V+A MM R +NI +D Sbjct: 220 NKRIEGNPEVDKEVRELMKKLEEGDNEIAEIGRKLAERVVKAQMMTTYR-----MNITYD 274 Query: 258 IFISEDDFHR-GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 + E D R G +I++ + EG K MD ++L Sbjct: 275 LLSWESDIMRSGIFEEAYGLIESNPNFFWAEEG-------KYKGAFVMDLRKLF------ 321 Query: 317 GDDVDRPLL---KSDGSYTYFAADLAYFKCKYERGFDNMIYVM---------------GS 358 D+ P L +SDG+ TY D+AY K+ + +M+Y G Sbjct: 322 -PDMKNPFLVLKRSDGTATYTGKDIAYHLWKFGKVSSDMLYKPWDRLEDHETWTTAPDGE 380 Query: 359 DHSGYVKRLEAVAAAVS--EKKAQINVLLCELVRLYRDGM--------------PIKMSK 402 + SG + + V + +K Q+ + + + D K S Sbjct: 381 EMSGKFGKADIVINVIGAEQKHPQMAIKYALQLLGFEDSAQNFHHLAYEHVVRPEGKFSG 440 Query: 403 RAGDFI--TLRHVVDE---------------------------VGSDSVRFMMLWRKNSE 433 R G ++ T+ V++E VG +VRF ++ + Sbjct: 441 RKGTWVGFTVDEVLNEAVRRAKELVEEKNPNLSEEEKEKIAEAVGVGAVRFNLVKYSPDK 500 Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF-DLFPRNVIPQESEFD 492 ++ F + V E+ YVQYA+ARC SI R+A++ +++ +L R S+ Sbjct: 501 IITFRWEDVLNFEGESAP-YVQYAHARCASILRKAEESGVSVEWEELLKRADF---SKLT 556 Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552 E +LI LA +P +IE A +P+ + +Y ++AS+F+ + ++P L+ Sbjct: 557 NREKELIKLLARFPEIIEGAGKDIKPHLIPWYANEVASLFNKFYM---DHPVLKAEDGVR 613 Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL LV A ++ + L ++G+ESP +M Sbjct: 614 EE----RLLLVLATKQVLRNALALLGIESPEKM 642 >gi|257053080|ref|YP_003130913.1| arginyl-tRNA synthetase [Halorhabdus utahensis DSM 12940] gi|256691843|gb|ACV12180.1| arginyl-tRNA synthetase [Halorhabdus utahensis DSM 12940] Length = 583 Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 165/617 (26%), Positives = 266/617 (43%), Gaps = 119/617 (19%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAG 85 D + IERP + L+++AA L+ G P IA I + +IDP V SV G Sbjct: 25 DDLGIERPPEDVPAVLASSAAYRLADVAGAPPPKIAADIAS--EIDPAEYDYVGSVQTQG 82 Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 ++N S Y L + +YG L G V +E SANPTGP+HVG R + Sbjct: 83 P-YVNFLPSDRYFEGTLEA--AQAADYG-TLEDTGDSVVVEHTSANPTGPVHVGRARNPI 138 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEG----- 199 VGD LA ++ ++G +V R YY+NDAG QI +VF W Y+ ++SDLPE Sbjct: 139 VGDALARVLEYAGNDVERHYYVNDAGRQI-----AVFTWAYETF---DESDLPEPERESP 190 Query: 200 ------YYPGV--YLKHVGKELADKYSSEL------LNFPEEKWLPIVKDYSVQAMMKII 245 YY YL+ + + E+ L +E+ V + V ++ + Sbjct: 191 EYEMVRYYRAANDYLEEASESEQEAAEDEIGAILQGLEEGDEETYERVSEV-VDTVLGGM 249 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR-QGYVYEGILPPPKSKTTQKCDM 304 R+ L L + D F+ E F R D++D L V+E + + D+ Sbjct: 250 RETLGRLPAEFDEFVKETRFMRD--GSTDDLVDRLKELDAAVFE--------EDAWQLDL 299 Query: 305 D--RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 K L+F L+SDG+ Y DLA+ + K++ FD + V+G DH Sbjct: 300 PDFEKNLVF-------------LRSDGTSLYTTRDLAHHEWKFD-NFDRAVTVLGEDHKL 345 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------ 416 +L + + ++ + V L G MS R G + L ++DE Sbjct: 346 QADQLSSTLDLLGHDTDRLQQVFYSWVNLPEGG----MSTREGTGVDLDDLLDEAIDRAR 401 Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKE 448 VG +VR+ ++ ++ ++ + F++ + + +++ Sbjct: 402 EEVEDRLEDRQRSDDLDGADVERIAHQVGIGAVRYDVVAKQPTKGITFEWDRALDFEAQS 461 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 P YVQY +ARC I + KD ++ + + E+E D L+ +A +P V Sbjct: 462 AP--YVQYVHARCCGIIDEGKDAGYEVP-ETVSAATLTTEAERD-----LLRAIARFPGV 513 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 IE A P+ +A Y D+A F+ + RE P L A+ + A + Sbjct: 514 IEQAAEELRPHVVATYTRDIAEAFNTFY---RECPVL---DADPETRAARLALVAAARTT 567 Query: 569 IINSGLNIIGVESPNEM 585 + N+ L+ +GVE+PN M Sbjct: 568 VANA-LDALGVEAPNSM 583 >gi|157497158|gb|ABV58323.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Dirofilaria immitis] Length = 189 Score = 140 bits (352), Expect = 8e-31, Method: Composition-based stats. Identities = 70/161 (43%), Positives = 102/161 (63%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 ++ ++E P + A+G + TN AM+L+R + + IAE++ ++ ++ V IAG GF Sbjct: 25 VENFILEPPSNRAYGDVYTNVAMVLARYERKNSIEIAEILAEEFELFNEIAKVEIAGPGF 84 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 IN+ +IL I E+G IG VN+EFVSANPTGP+H+GH R A+ GD Sbjct: 85 INMNFKIEVWHRILKQINELKTEFGTLNIGNNQAVNVEFVSANPTGPLHIGHVRGAIFGD 144 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189 LA+L+ GY+ T+EYYINDAG QI+ L SV+ RY++AL Sbjct: 145 VLANLLKKVGYQTTKEYYINDAGTQIDMLIRSVYLRYKEAL 185 >gi|14520895|ref|NP_126370.1| arginyl-tRNA synthetase [Pyrococcus abyssi GE5] gi|13878801|sp|Q9V0V2|SYR_PYRAB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|5458112|emb|CAB49601.1| argS arginyl-tRNA synthetase [Pyrococcus abyssi GE5] Length = 625 Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 154/625 (24%), Positives = 268/625 (42%), Gaps = 120/625 (19%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYL-RK 100 G T A L+R + P IAELIV +K + P+ A G++N ++ YL R+ Sbjct: 39 GDFGTPVAFKLARVMKKPPFQIAELIVEELKKELPEGIREVRAINGYVNFFVDYGYLARQ 98 Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 ++ ++ G +G + IG+G KV +E S NPT P+H+GH R A++GD++A ++ F GYE Sbjct: 99 LIVEVLEKGDRFGSSDIGRGKKVIVEHTSVNPTKPLHMGHARNAILGDSMARILRFLGYE 158 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY---LKHVGKELADKY 217 V + YI+D G Q V+W Y + + + E G+ + HV L + Sbjct: 159 VEVQNYIDDLGIQFA----QVYWGYLKLREKFEKIMKELKEKGIKEDPIDHVLGLLYVEV 214 Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMK---------------IIRDDLKA---LNIQHDIF 259 + L PE + ++ +MK ++R + L I++D+ Sbjct: 215 NRVLEENPE-------IEAEIRDIMKKLESGELNGRELAESVVRAQMVTTYRLGIKYDLL 267 Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319 + E D R + + + E P + K MD +L D Sbjct: 268 VWESDIVS------RKLFEIAVKLLERNENFYTPNEGKYKGAFVMDLSKLF-------PD 314 Query: 320 VDRPLL---KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK-RLEAVAAAVS 375 + P L +SDG+ TY D+AY K+ + +++Y +H+ E+V Sbjct: 315 MKNPYLVLRRSDGTATYTGKDIAYHLWKFGKIDVDLLYKPWDEHTWTTAPDGESVKGKFG 374 Query: 376 EKKAQINVLLCE--------------------------LVRLYRDGMPIKMSKRAGDFI- 408 INV+ E L + + K S R G ++ Sbjct: 375 GADIVINVIGAEQRHPQMAIKHALKLLGFEDAAENLHHLAYEHVERPEGKFSGRKGTWVG 434 Query: 409 -TLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFC 440 T+ V++E VG ++R+ M+ + + F + Sbjct: 435 FTVDEVINEAIKRARELIEEKSPGLSDEEKEEIAEKVGVGAIRYNMVKYSPDKKIIFRWE 494 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500 V E+ Y+QYA+ARC SI R+A + P+ + L N E E +LI+ Sbjct: 495 DVLNFEGESAP-YIQYAHARCSSILRKAGN--PEWEALLKEANF----KELTERERELII 547 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 L+++P V+E A +P+ +A+Y +LAS+F+ + ++P ++ + + RL Sbjct: 548 LLSKFPEVVEQAGRDVKPHLIAWYANELASLFNKFYM---DHPVIK----AEKGIREARL 600 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 LV AV ++ + L ++G+E+P+ M Sbjct: 601 LLVMAVRQVLRNSLWLLGIEAPDRM 625 >gi|84490352|ref|YP_448584.1| arginyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091] gi|109895002|sp|Q2NE12|SYR_METST RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|84373671|gb|ABC57941.1| ArgS [Methanosphaera stadtmanae DSM 3091] Length = 560 Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 165/626 (26%), Positives = 287/626 (45%), Gaps = 109/626 (17%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 +++ + + +KE K+++ K D I++E P + + G +STN A L+ L P+ Sbjct: 1 MYSKLKTEINESIKEALTKLRI--KYDDEIILEEPPNPSMGDMSTNIAFSLASKLKKSPV 58 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE--YGRNLIGKG 120 IA+ I IK+ + V G +IN Y++ + + ++ VV+ I+ YG L K Sbjct: 59 EIAQEIKENIKLPLYFEKVETKGP-YINFYINYT----LFTTKVVNYIDKNYGE-LPEKD 112 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 ++ +E SANP GP+HVGH R A++GD+L ++ +GY+V +YY+ND G QI Sbjct: 113 ERILLEHTSANPNGPLHVGHLRNAILGDSLKRILQHAGYKVEAQYYVNDMGRQIAI---- 168 Query: 181 VFWRYQQALYNNDSDLPEGYYPG-VYLK-HVGKELADKYSSE----LLNFPEEKWLPIVK 234 + W + Y D D + G VY K + E +Y+ E L + E ++ Sbjct: 169 IVWGMDKFNYTVDDDKKADHAIGEVYYKCNQQLEANPEYNQEIDDILRKYEEGTDAALID 228 Query: 235 DYS--VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 + V+ + I++ LK LNI+ ++F E F R + D+++ L + + + IL Sbjct: 229 AFQGVVEYCIDGIKETLKDLNIKMNLFKWESTFLRN--GSVDDVLEKL-QPFTIQKDILY 285 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 P ++ ++D K+L+ R +S+G+ Y DLAY + K + D Sbjct: 286 LP----LERYNVD-KELVLR-------------RSNGTSLYATRDLAYHQYK-TKNSDIS 326 Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412 + ++G+DH K+L +A +S +A V+ E + L MS R G FI+ Sbjct: 327 LDILGADHKLAAKQL-GLALELSNNRAP-EVVFYEFIDLPEGS----MSTRKGVFIS--- 377 Query: 413 VVDEVGSDSVRFMM--LWRKNSELLDFDFCKVKEQSK----------------ENPVFY- 453 VDE SV L R++ LD +++E SK E P+ + Sbjct: 378 -VDEFIEQSVEHAKEELIRRD---LDLTEKQIEEVSKIVGVGSIRFYINQISPEKPITFK 433 Query: 454 -------------VQYAYAR-CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 +QYA+AR C+ + + + F ++ D E D E LI Sbjct: 434 WEEALSFERGCASIQYAHARACKLLAKSDYNEFEEVRCDY----------ELDDEEKDLI 483 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 L+++ VI + + + LA Y L+ F+ + + + + + KL R Sbjct: 484 KTLSQFTEVICQSAQERRVHHLAQYTLSLSKAFNKFYKSK------QVIGSEHEKL---R 534 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L+LV A + + L ++G++SP M Sbjct: 535 LKLVDASRITLKNSLKLLGIKSPEFM 560 >gi|304313810|ref|YP_003848957.1| arginyl-tRNA synthetase [Methanothermobacter marburgensis str. Marburg] gi|302587269|gb|ADL57644.1| arginyl-tRNA synthetase [Methanothermobacter marburgensis str. Marburg] Length = 560 Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 144/603 (23%), Positives = 270/603 (44%), Gaps = 101/603 (16%) Query: 23 KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82 K++ + I +E P + G L+ A L+ L P+ I I++ I+ P++ Sbjct: 19 KLQLPVPSEIKLEEPPNPQLGDLACTVAFELAGELKRPPMEITSDIMSVIET-PEIFEAV 77 Query: 83 IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 + +IN ++ L L I+ +YG + +G ++ +E SANP GP+H+GH R Sbjct: 78 ESKGPYINFFVDYGKLSGKLLEIIDD--DYGSH-PERGERIILEHTSANPNGPLHIGHIR 134 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202 A++GD+LA ++ +GY+V +YY+ND G QI + W L N +L + YP Sbjct: 135 NAIIGDSLARILRKAGYQVETQYYVNDMGRQIAM----IVW----GLLNLQKNLDD--YP 184 Query: 203 GVYLKHVGKELADKYSSELLNFP--EEKWLPIVKDYS-----------VQAMMKIIRDDL 249 G H L + + +L P +E+ +++ Y V+ + +++ + Sbjct: 185 GDKRDHRVGRLYLEVNQKLKEDPGIKEEVDELLRQYEAGENEDTFREVVEYCLDGMKETM 244 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 + L++ HD F+ E + R + ++I++L + G ++ + +D + Sbjct: 245 QRLHVHHDRFVWEGELVRD--GTVGEVIESLRKTGL----------TRENEVLYLDLEDF 292 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369 +V L +SDG+ Y D+AY K G D +I V+GSDH +++ Sbjct: 293 GIEKELV-------LTRSDGTSLYSTRDIAYHLQKSREG-DILIDVLGSDHKLAAEQVGI 344 Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------- 416 + KK + V+ E + L MS R G FI++ ++DE Sbjct: 345 AVDLLGGKKPE--VIFYEFITLPEG----SMSTRRGVFISVDELMDEAHKRALEEVEKRR 398 Query: 417 -------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR-CR 462 +G+ ++R+ + + + F + + S E +QYA+AR C+ Sbjct: 399 ELPDDVADEIAEAIGNGAIRYYIARLSPEKHIVFRWDEA--LSFERGCASIQYAHARACK 456 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 + + + + D++ P N E +L+ LA +P V+E A +A+ + +A Sbjct: 457 LLKKASFNGDEDIEDTWKPEN----------DEKELVRLLARFPVVVEEAAMARRVHPVA 506 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 Y+ DLA+ F+ + R P + + RL+LV +V +I + L ++G+ +P Sbjct: 507 QYVQDLANAFNSFY---RSTPVI------GSEFEGARLRLVDSVRIVIRNALGLLGIHAP 557 Query: 583 NEM 585 M Sbjct: 558 ETM 560 >gi|323144078|ref|ZP_08078721.1| arginine--tRNA ligase [Succinatimonas hippei YIT 12066] gi|322416154|gb|EFY06845.1| arginine--tRNA ligase [Succinatimonas hippei YIT 12066] Length = 578 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 153/625 (24%), Positives = 274/625 (43%), Gaps = 105/625 (16%) Query: 11 LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 LKN + + ++ + +++ I +ER +D AHG +TN A+IL++PL ++P +AEL++ Sbjct: 9 LKNAVLVLAKDHEIPENVINNIKVERAKDKAHGDFATNLALILAKPLKMNPRAVAELLIK 68 Query: 71 RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130 ++ ++ IAG GFIN ++S S+ + L + S + G V +++ + Sbjct: 69 NLEPSARIEKTEIAGPGFINFFVSDSFTAEKLQEM-RSDVRLGIKEADVKDIVVVDYSAP 127 Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190 N M V H R V+GD + ++ F G++V R ++ D G Q L + Q+ Y Sbjct: 128 NVAKEMAVHHIRSTVIGDAVVRVLEFLGHKVIRANHVGDWGTQFGMLI--AYLEEQENKY 185 Query: 191 NNDSDLP--EGYYPGVYLKHVGKE----LADKYSSELLNFPE---EKWLPIVKDYSVQAM 241 D DL E +Y ++ E LA Y +L + E + W Q + Sbjct: 186 GTDLDLSDFEAFYRAAKERYDSDEDFAVLARSYVVKLQSGDEYCKKMW---------QKL 236 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHR----GDPSPIRDIIDNLARQGYVYEG------IL 291 +K+ D + L + D+ ++E D D P I+++L ++G E L Sbjct: 237 VKMTMDQNQKLYDRLDVTLTEKDVMGESLYNDMLP--KIVEDLMQKGIAVEDQGAVVVFL 294 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351 P K+K G+ + + K DG Y Y D+A K + E N Sbjct: 295 PQFKNKD------------------GEPLGEIVRKKDGGYLYTTTDIACVKYRVETLKAN 336 Query: 352 -MIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 ++Y + S +++ ++A A +++ +I ++ L +DG P K R+G + Sbjct: 337 RLMYFIDSRQHQHLEAAWSIARMAGYADESVRIEHEAFGMM-LGKDGKPYKT--RSGGTV 393 Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFD-----------FCKVKEQSKE--------- 448 LR ++DE +++ +L ++NS L D K + SK Sbjct: 394 KLRDLLDE--AENRVTALLDKRNSPLQGKDRDEVIHNIAIGAVKYADLSKNRMTDYVFDW 451 Query: 449 --------NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500 N Y+QYAY+R RSIFR+A ++ P ++ QE +E L Sbjct: 452 DLMLSFDGNTAPYLQYAYSRIRSIFRKA---------EIEPGAIVLQEE----AENDLAT 498 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 L + +++ P+ L YL++L+ +F + P L+ A K + RL Sbjct: 499 KLLAFEDTVKSVAEKAMPHLLCTYLFELSGIFMRFYEAC---PVLKGDVALEIKAS--RL 553 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 L A ++ GL ++G+ + +M Sbjct: 554 ALCDLTAKVLKQGLGLLGINTMEQM 578 >gi|325957848|ref|YP_004289314.1| arginyl-tRNA synthetase [Methanobacterium sp. AL-21] gi|325329280|gb|ADZ08342.1| Arginyl-tRNA synthetase [Methanobacterium sp. AL-21] Length = 561 Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 150/597 (25%), Positives = 261/597 (43%), Gaps = 96/597 (16%) Query: 27 KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK 86 +I D I +E P + G ++++ + L++ L P+ I + I+ +KI PD+ S + Sbjct: 23 EIPDEIKVEEPPNPELGDVASSVSFQLAKELKRSPMEITQEILKALKI-PDIFSKVESKG 81 Query: 87 GFINLYLSPSYLRKILSSIVVSGI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 +IN Y + + SS+V++ I +YG+ L TK+ +E SANP GP+H+GH R + Sbjct: 82 PYINFYANYNEF----SSLVLNSITEDYGK-LESNNTKIILEHTSANPNGPLHIGHIRNS 136 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPG 203 ++GD+LA ++ +GYEV +YY+ND G QI + W YN D P+ Sbjct: 137 IIGDSLARVLKSAGYEVETQYYVNDMGRQIAM----IVWGLLNLDYNMDPFGKPDHEIGK 192 Query: 204 VYLK-----HVGKELADKYSSELLNFP--EEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 +Y E+ D+ S+ L + ++ L + + V+ ++ I K LN+ H Sbjct: 193 LYFNVNEKLRANPEIKDEVSALLKRYERGDDPELEKMFEGVVKNCLEGISTTSKRLNVNH 252 Query: 257 DIFISEDDF-HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315 D FI E F G + I +D ++ V MD + Sbjct: 253 DAFIWESRFIKNGSVANILKSLDEYIQKNEV---------------VYMDLNSYGIEKEL 297 Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375 + L++SDG+ Y DLAY K K E G D I ++GSDH + +L+ + Sbjct: 298 I-------LIRSDGTSLYATRDLAYHKEKSE-GSDRYIDILGSDHKLAIDQLKVPLELLG 349 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435 K + + E + L MS R G FI++ +++E S ++ + + ++ ++L Sbjct: 350 AKAPE--TIFYEFITLPEGS----MSTRRGVFISVDELMNEAVSRAM--IEIEKRRTDLG 401 Query: 436 DFDFCKVKE-------------QSKENPVFY--------------VQYAYARCRSIFRQA 468 + + K+ E S E + + +QYA+AR + A Sbjct: 402 ESERLKIAEIVGIGAIRYYIARLSPEKHIVFKWDEALSFERGCASIQYAHARACKLLENA 461 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 L D F + D E++L+ ++++ IE + + +A Y DL Sbjct: 462 NYDRNSLKIDNFDLD--------DKIEIELVKLMSKFSAAIEESARINRVHNIAQYSLDL 513 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A F+ + L + + L RL +V I + L +IG+E+P M Sbjct: 514 AGGFNKFYKA------LPVIDSEKEDL---RLLIVDKFRITIRNSLELIGIEAPESM 561 >gi|124486323|ref|YP_001030939.1| arginyl-tRNA synthetase [Methanocorpusculum labreanum Z] gi|166232802|sp|A2STL6|SYR_METLZ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|124363864|gb|ABN07672.1| arginyl-tRNA synthetase [Methanocorpusculum labreanum Z] Length = 558 Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 151/576 (26%), Positives = 250/576 (43%), Gaps = 79/576 (13%) Query: 42 HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG-FINLYLSPSYLRK 100 H L++ + L++ +P IA +VA + P+ + I+ KG +IN Y Sbjct: 30 HADLASTVSFALAKTQRKNPAVIAGELVAVLSAKPEAKGIEISAKGPYINFIFGGDY--- 86 Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + S+ + E L + KV IE SANP GP+HVGH R V+GDTL +GY Sbjct: 87 VAESVHAARREDYGTLPARTDKVIIEHTSANPNGPLHVGHIRNTVIGDTLVRAFRKAGYP 146 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYN------NDSDLPEGYYPGVYLKHVGKELA 214 V +YY+ND G QI +A W Q Y+ D + Y + E+ Sbjct: 147 VEAQYYLNDMGRQIAIVA----WGVQNLHYDRIPGEKGDEYIVRHYVEANKIAKAKPEIE 202 Query: 215 DKYS--SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 ++ E + + + + + D SV I++ L ++N+ HD F+ E F Sbjct: 203 PEFDLLMEKIEAGDPETVKLFHD-SVDICADGIKETLSSMNVVHDKFVRETTFLWN--GS 259 Query: 273 IRDIIDNLARQGYV-YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 ++D+++ + + V +EG Q +D F + V L +S+G+ Sbjct: 260 MQDVLNRIEKLPIVHHEG----------QMMYLDLSDEGFGNRYV-------LRRSNGTS 302 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN----VLLCE 387 Y A DLA+ K + D I V+G+DH +L+ + E+ +I V L E Sbjct: 303 VYAARDLAFHLWKNAQ-CDRSIDVLGADHKLIGAQLQTTLKLIGERPPEIVHFEFVSLPE 361 Query: 388 LVRLYRDGMPI-------KMSKRAGDFITLRH----------VVDEVGSDSVRFMMLWRK 430 R G+ I + KRA + +T+R + V +VR+ ++ Sbjct: 362 GSMTTRGGVFITADELIAETKKRAMEEVTVRRPELGEDEREKIAKAVAVGAVRYDIVKVS 421 Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490 + FD+ + + +++ Y+QYA+AR SI +AK + E Sbjct: 422 AEKSTVFDWKEALDFERQSAP-YIQYAHARACSIMEKAK-----------AEGGFAECYE 469 Query: 491 F-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549 + D EL L H+A +P V+E P+ LA Y+ DLA +F+ + R P L+ + Sbjct: 470 YSDPYELALAKHIARFPYVLEKVVCELRPHLLATYVRDLADLFNSFY---RFAPVLK-AE 525 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N R RL LV A + + L ++G+E+ M Sbjct: 526 GNVRD---ARLTLVDACRNTLYQALGVLGIEALESM 558 >gi|300709761|ref|YP_003735575.1| arginyl-tRNA synthetase [Halalkalicoccus jeotgali B3] gi|299123444|gb|ADJ13783.1| arginyl-tRNA synthetase [Halalkalicoccus jeotgali B3] Length = 582 Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 150/612 (24%), Positives = 260/612 (42%), Gaps = 118/612 (19%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG----FI 89 +E P + L+++ A L+ +G P +A + + ++ G G ++ Sbjct: 29 LEEPPEDVEAVLASSVAFRLAGEVGTSPHEVAGDLADATDV---AGCEYLGGVGTQGPYV 85 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N + S +Y L + +YGR L G +V +E SANPTGP+HVG R ++GD Sbjct: 86 NFHASDAYYADTLET--AREADYGR-LEPTGREVVVEHTSANPTGPVHVGRARNPIIGDA 142 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNN--DSDLPEGYYPGVYL 206 +A L+ F+G V R YY+NDAG Q ++VF W Y+ ++ D D + Y V Sbjct: 143 IARLLDFAGNNVDRHYYVNDAGRQ-----MAVFTWAYETFEEDDLPDPDREKADYELVRY 197 Query: 207 KHVGKELADKYSSE---------------LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251 G ++ L N EE + + + V ++ +R+ L Sbjct: 198 YRKGNAFLEEADEGEVEAAEAEIQSIMQGLENGDEEAYERV--GHVVDTVLGGMRESLSR 255 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLAR-QGYVYEGILPPPKSKTTQKCDMD--RKQ 308 L + D F+ E F R + +++ L VYE + + D+ K Sbjct: 256 LPAEFDAFVKETRFIR--DGSVEELVKRLRELDEAVYE--------EEAWQLDLPDFEKN 305 Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368 L+F L+SDG+ Y DLA+ + K++ +D+ + V+G DH +L Sbjct: 306 LVF-------------LRSDGTSLYTTRDLAHHEWKFDE-YDHAVTVLGEDHKLQATQLG 351 Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416 A + +++ + V L KMS RAG + L ++DE Sbjct: 352 AALDLLGNDTDRLDSVFYSYVNLPEG----KMSTRAGTGVDLDDLLDEAVARARDEVETR 407 Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYV 454 VG +VR+ ++ ++ S+ + F++ + +++ P YV Sbjct: 408 MDDRIRDDDLTESDIERIARQVGIGAVRYDIVSKQPSKAITFEWDRALNFEAQSAP--YV 465 Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT-SELQLIVHLAEYPRVIENAT 513 QY +AR I +A D P + P + D+ E L+ + +P VIE+A Sbjct: 466 QYVHARTCGILTEAARAGHD------PGRIDP--ALLDSPEERDLLEVIGRFPAVIESAA 517 Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573 ++P+++A Y + A F+ + R R V + + LT RL LV I + Sbjct: 518 TDRQPHQVATYTREFAETFNAFY-------RERQVISADEDLTEARLALVAGARHTIANA 570 Query: 574 LNIIGVESPNEM 585 L+++G+E+P M Sbjct: 571 LSVLGIEAPESM 582 >gi|297619524|ref|YP_003707629.1| arginyl-tRNA synthetase [Methanococcus voltae A3] gi|297378501|gb|ADI36656.1| arginyl-tRNA synthetase [Methanococcus voltae A3] Length = 590 Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 155/614 (25%), Positives = 275/614 (44%), Gaps = 108/614 (17%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI----AGK 86 I ++ P G STN L++PL P IAE IV+++ + D+ ++ I A Sbjct: 26 EIRLDEPPSINMGDYSTNICFRLAKPLRKAPKMIAEDIVSQLIEENDLKALKIEKIEALN 85 Query: 87 GFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 G+IN ++ + +++LS+I +G+ L K KV +E SANP GP H+GH R V Sbjct: 86 GYINFFVDYNEFSKEVLSNIADEKESFGK-LETKNEKVILEHTSANPNGPFHIGHGRNMV 144 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---DSDLPEGYYP 202 +GD+L ++ +GY+V +YY+ND G Q A+ V+ + L N D + E Y Sbjct: 145 IGDSLKRILINAGYDVETQYYVNDMGRQ---EAIVVYGLDKFNLNENKKQDHGIGEVYVE 201 Query: 203 GVYL----KHVGKELAD---KYSSELLNFPEE-KWLPIVKDY--SVQAMMKIIRDDLKAL 252 L + + +E+ D Y S+ F +E K I+ + +V + + L L Sbjct: 202 TNKLLNENEDLNQEILDLMRNYESDCEIFEKEGKESEIMGKFEKAVNYTLDGFKQTLGNL 261 Query: 253 NIQHDIFISEDDF-HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 NI HD F+ E F GD ++ +I L G V K ++ Sbjct: 262 NIYHDKFVWESSFVKNGD---VKSLIARLKETGKVV-------------------KDEVY 299 Query: 312 RSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369 R + +++ ++ + +G+ Y D+AY K E D + ++G+DH + Sbjct: 300 RLDLSDYGIEKKMVLARLNGTSLYSTRDIAYHIAKME-NCDKAVNLLGADHKLTAIMVNK 358 Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------- 416 + +A I + E + L MS R G FI++ +++E Sbjct: 359 TLDLLGYNEADI--VFYEFISLPEGS----MSTRRGTFISMDELLEEAKVRAKSEIIKRN 412 Query: 417 VGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFY---------------VQYAYAR 460 V +D + K + + ++ ++ S E P+ + +QYA+AR Sbjct: 413 VATDEAEIEEIANKIAVGAVRYNIVRI---SPEKPMIFRWDEALDFEKVGCPVIQYAHAR 469 Query: 461 CRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIEN 511 C I D+ ++D N+ ESEF + SE L+ +++ P +IE Sbjct: 470 CCRILENVSNSDNLDVLTNMD------NINNLESEFNYEMNDSEKVLVRMISKLPEIIEK 523 Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571 + ++P LA Y+ D+A F+ + + P L+ ++ N K + R+++V+A +I Sbjct: 524 SAEVRKPQILANYVLDVAQSFNKFYGNC---PILK--ESENIKNS--RIKIVNATKIVIE 576 Query: 572 SGLNIIGVESPNEM 585 + L ++G+E P +M Sbjct: 577 NSLELLGIEVPGKM 590 >gi|20088942|ref|NP_615017.1| arginyl-tRNA synthetase [Methanosarcina acetivorans C2A] gi|23822191|sp|Q8TUM3|SYR_METAC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|19913789|gb|AAM03497.1| arginyl-tRNA synthetase [Methanosarcina acetivorans C2A] Length = 567 Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 150/586 (25%), Positives = 261/586 (44%), Gaps = 90/586 (15%) Query: 40 CAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD---VDSVFIAGKGFINLYLSPS 96 +H L++ A L+ +P +A IV+ I+I P+ + V AG +IN Sbjct: 32 SSHADLASRVAFRLASIHKQNPKELASRIVSAIEI-PEGSYIGEVSAAGP-YINFLAGRH 89 Query: 97 YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 Y+ + ++++ ++G ++ +E SANP GP+HVGH R +++GDTLA ++ Sbjct: 90 YMDETVTAVREEKEKFGCG--APKDRILLEHTSANPNGPLHVGHIRNSIIGDTLARILRR 147 Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD- 215 +GY+V +YY+ND G QI ++ + R++ L S + VY+K EL Sbjct: 148 AGYDVEVQYYVNDMGRQIAVVSWAC-ERFELDL----SRKSDAAIADVYIK-ANVELDKN 201 Query: 216 ----KYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 K L+ E L ++ D +V + I++ L LN+ HD F++E F + Sbjct: 202 PDYVKKIDALMEKVEVGDLQTIERFDKAVSLAIAGIKETLLRLNVVHDKFVNESRFLKS- 260 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + DI++ + K T + + D+ L+ + G + + +S+G Sbjct: 261 -GEVHDIVERI----------------KATGRTETDKGALVVDLSDYGFEKTLVIQRSNG 303 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 + Y DLAY + K + D +I V G+DH +L A A+ K+ + V++ E V Sbjct: 304 TSLYTTRDLAYHEWKAGQA-DRIIDVFGADHKLISGQLRATLNAIGIKEPE--VVIFEFV 360 Query: 390 RLYRDGMPIKMSKRAGDFITL---------------------------RHVVDEVGSDSV 422 L MS R G FI+ + V + VG +V Sbjct: 361 SLPEGS----MSTRRGQFISADDLFDRVTEAAFEQVESRRPETSTEFKKQVAEMVGIGAV 416 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 R+ ++ + F++ + + K+ Y+QY++AR SI +AKD + +D P Sbjct: 417 RYDIVRVSPEKSTVFNWKEALDFEKQGAP-YIQYSHARACSILEKAKD---EAAWD--PA 470 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 I + SE+ LI +A + +I+ +P+ LA Y +LA F N Sbjct: 471 EEITPSLLVEDSEIDLIKKMAMFDSIIDLGARELKPHVLAIYARELADSF---------N 521 Query: 543 PRLRFV---QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 RFV A + K+ RL LV ++ + L+ +G+ +P M Sbjct: 522 QFYRFVPVIAAEDEKVRASRLALVDCARIVLANSLDTLGIGAPESM 567 >gi|288561373|ref|YP_003424859.1| arginyl-tRNA synthetase ArgS [Methanobrevibacter ruminantium M1] gi|288544083|gb|ADC47967.1| arginyl-tRNA synthetase ArgS [Methanobrevibacter ruminantium M1] Length = 573 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 147/624 (23%), Positives = 278/624 (44%), Gaps = 112/624 (17%) Query: 11 LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 L+ + + DC+ E I +E P + G L++ + L++ L P IA +V Sbjct: 13 LRKAVDQFDCEFDEE------IKLEFPPNPELGDLASTISFQLAKLLRKAPNLIAPEVVE 66 Query: 71 RIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129 +I++ P++ A ++N +++ + +++L S+ +YG+ L K+ +E S Sbjct: 67 KIEL-PEIFERVEATGPYVNFFINHDIFAKQLLDSV---DEDYGQ-LAAVDEKIILEHTS 121 Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ--- 186 ANP GP+H+GH R +V+GD+L L+ +GY V +YY+ND G Q LA+ V+ + Sbjct: 122 ANPNGPLHIGHIRNSVIGDSLRRLLTKAGYNVDTQYYVNDMGRQ---LAMIVYGMEELGL 178 Query: 187 ----QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP------EEKWLPIVKDY 236 Q D + E Y+ + + L D + + + +EK+ +Y Sbjct: 179 KLEDQPASKIDHKVGELYFKVNQMIKEDESLNDGVDATIRKYEGGPSELDEKF-----EY 233 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 +V + ++ +++ LK +N++HD F+ E F R I+DNL ++ Y Sbjct: 234 AVNSCLEGVKETLKRMNVKHDAFVWEGQFVRTG------IVDNLTQELY----------- 276 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYERGFDNMIY 354 R++ + + D+ + L+ ++DG+ Y D+AY K + D +I Sbjct: 277 ----DIGYARQEEVLYLDLSEFDIPKELVLRRADGTSLYSTRDIAYHIYK-SKNCDKIID 331 Query: 355 VMGSDHSGYVKRLEAVAAAVSE---KKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--- 408 + GSDH +++E + E +I V+ E + L M S R G FI Sbjct: 332 IFGSDHKLAARQVELALEILEEIEPNSDKIEVIFYEFITLPEGSM----STRRGVFISVD 387 Query: 409 ------------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 T+ + +E+G ++R+ + + + F + + Sbjct: 388 ELMDEAVRRATEEIISRRPDLDKETIDKIAEEIGIGAIRYYIARLSPEKHITFKWDEA-- 445 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 S E +QYA+AR + ++A++ + DL V S D +E +L+ +A+ Sbjct: 446 LSFERGCASIQYAHARACKLLKKAQE---EKGIDLADLTVEDTWS-LDENEKELVKLIAK 501 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN---RKLTMMRLQ 561 +P ++E++ + + +A Y DLAS F+ RF +A + RL Sbjct: 502 FPSLVEDSAKIRRVHPIAQYCQDLASAFN------------RFYKAEQVIGSDVENARLL 549 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 LV + + L+++GV +P+ M Sbjct: 550 LVEKSRITLRNALDLLGVSAPDMM 573 >gi|257387346|ref|YP_003177119.1| arginyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286] gi|257169653|gb|ACV47412.1| arginyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286] Length = 591 Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 150/571 (26%), Positives = 246/571 (43%), Gaps = 117/571 (20%) Query: 78 VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMH 137 VDSV G ++N S +Y + L++ +YG+ L + T V +E SANPTGP+H Sbjct: 75 VDSVEQRGP-YVNFLPSDAYFSETLAA--AQAEDYGQ-LPDRDTSVVVEHTSANPTGPVH 130 Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDL 196 VG R ++GD LA ++ ++GY+V R YY+NDAG Q ++VF W Y+ ++ D DL Sbjct: 131 VGRARNPIIGDALARVLDYAGYDVDRHYYVNDAGRQ-----MAVFTWAYE--TFDED-DL 182 Query: 197 PEGY-----YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS-------------V 238 PE Y V G ++ ++ + E + I++ V Sbjct: 183 PEPERDSPEYEMVRYYRKGNSFLEEADADRVEDAESEIQAILQGLEAGDEDAYERVGEVV 242 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL-ARQGYVYEGILPPPKSK 297 ++ + + L L + D F+ E F R D + D++D L A VYE + Sbjct: 243 DTVLGGMSETLGRLPAEFDEFVKETRFMRNDAT--EDLVDRLKALDQAVYE--------E 292 Query: 298 TTQKCDMD--RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 + D+ K L+F L+SDG+ Y DLA+ + K++ +D + V Sbjct: 293 DAWQLDLPGFEKNLVF-------------LRSDGTSLYTTRDLAHHEWKFDT-YDRAVTV 338 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 +G DH +L+ + Q++ + V L GM S R G I L ++D Sbjct: 339 LGEDHKLQADQLDTTLDLLGHDTDQLSQVFYSWVNLPEGGM----STREGTGIDLDDLLD 394 Query: 416 E---------------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442 E VG +VR+ ++ ++ ++ + F++ + Sbjct: 395 EAIDRAREEVESRIDTRSRDDDLDETDVERIAHQVGIGAVRYDIVSKQPTKGITFEWDRA 454 Query: 443 KE-QSKENPVFYVQYAYARCRSIFRQA-------KDIFPDLDFDLFPRNVIPQESEFDTS 494 + +++ P YVQY +ARC I +A K+ P+ + ++E D Sbjct: 455 LDFEAQSAP--YVQYVHARCCGIRSEAEHAVEEGKEREPESTAADLDAAPLATDAERD-- 510 Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554 L+ +A +P VIE A P+ +A Y LA F+ + RE P L R Sbjct: 511 ---LLREIARFPAVIEQAADEHRPHVVATYTRTLAEQFNTFY---RECPVLDADPDTKR- 563 Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL LV A I + L+ IG+ +P M Sbjct: 564 ---ARLALVDAARHAIANALDAIGIAAPRSM 591 >gi|295397707|ref|ZP_06807779.1| arginine--tRNA ligase [Aerococcus viridans ATCC 11563] gi|294974036|gb|EFG49791.1| arginine--tRNA ligase [Aerococcus viridans ATCC 11563] Length = 566 Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 169/626 (26%), Positives = 281/626 (44%), Gaps = 113/626 (18%) Query: 11 LKNYLKEIDCKIKVEKKI-LDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 LKN + ++ K +E ++ L++I ++E P+ HG ++ I ++ L P IA+ Sbjct: 3 LKNQVAQV-IKSSIETELTLEQIQNLLEVPKHEGHGDIAF-PCFIFAKELRKAPQAIAQE 60 Query: 68 IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIE 126 I +I+ + VD V G +IN +L+ + + + IL+ I +G +G IG G + I+ Sbjct: 61 IAPQIEGEI-VDRVEAVGP-YINFFLNQTLVTQAILTEIYEAGNHFGELAIGHGENITID 118 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRY 185 S N PM +GH R V+G+ +A++ G+ R ++ D G Q L + W Sbjct: 119 MSSPNIAKPMSMGHLRSTVIGNAIANITTKVGFNPVRINHLGDWGTQFGKLIVGYKKWGS 178 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ--AMMK 243 ++A+ N YY + + + E L W ++D + A+ K Sbjct: 179 EEAVRENPIQELLKYYVQFH--------EEAENDESLEDEGRLWFKKLEDGDPEAYALWK 230 Query: 244 IIRDD-LKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTT 299 +D+ LK +DI E D + G+ + +ID L + G+L + T Sbjct: 231 WFKDESLKEFQRIYDILGIEFDSYNGEAFYSDKMPAVIDELDDK-----GLLKVDRGATI 285 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIY 354 D++ L P L KSDG+ Y DLA Y K Y FD +Y Sbjct: 286 --VDLEAYNL------------NPALIKKSDGATLYITRDLATAIYRKNTY--NFDQSLY 329 Query: 355 VMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 V+G++ S + K+L+AV + + A IN + L+ +DG K+S R G+ + L V Sbjct: 330 VVGNEQSNHFKQLKAVLELMGYDWAADINHIPFGLIT--QDGK--KLSTRKGNVVLLEDV 385 Query: 414 VD-------------------------EVGSDSVRFMMLWRKNSELLDFDFC---KVKEQ 445 ++ +VG +V F L KN L FDF V+ + Sbjct: 386 LNDAIDLAFKQINEKNPDLENKEEVAHQVGVGAVIFHDL--KNDRLNSFDFNLEEVVQFE 443 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF--DTSE-LQLIVHL 502 + P YVQYA AR SI R+ F I + + F D+ E Q++ L Sbjct: 444 GETGP--YVQYANARAHSILRKGN----------FEPAKISEMTNFNLDSDEAFQVLKEL 491 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMR 559 YP ++ +A EP +A YL L+ F+ +++H R E+ +L+ R Sbjct: 492 NRYPDIVASAYEKYEPSVVAKYLLALSQQFNKYYAHTRILTEDDQLQ-----------SR 540 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L LV+A+ ++ SGL I+GV++P++M Sbjct: 541 LALVYALTQVLESGLAILGVQAPSQM 566 >gi|260891320|ref|ZP_05902583.1| arginine--tRNA ligase [Leptotrichia hofstadii F0254] gi|260858996|gb|EEX73496.1| arginine--tRNA ligase [Leptotrichia hofstadii F0254] Length = 574 Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 136/590 (23%), Positives = 253/590 (42%), Gaps = 75/590 (12%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 +++ I+ G TN AM+ S+ +G +P IA +V K + ++ + IAG GFI Sbjct: 26 EKVDIQNSTKKEFGDFQTNFAMVSSKLIGKNPREIASTLVDNFKENDIIEKLEIAGPGFI 85 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N+YL S+L + + V +Y + + V I++ S N MH+GH R ++GD+ Sbjct: 86 NIYLKNSFLNEEIKK--VENEKYDFSFLNTDKTVIIDYSSPNIAKRMHIGHLRSTIIGDS 143 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 + ++ F G+ + +I D G Q L ++ + Y D P G +Y++ Sbjct: 144 IKRILQFLGFHTLADNHIGDWGTQFGKLIVAYKNWLNKKAYEED---PIGELERIYVQFS 200 Query: 210 GK-----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 + L D+ EL K L + + + + + I LK N +D D Sbjct: 201 DEAKKNPALEDEAREEL------KKLQLGDEDNQKLWKEFIDISLKEYNKIYDRLDVNFD 254 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 ++ G+ S D++ +L K K + D + F + + + + Sbjct: 255 YYYGE-SFYNDMM----------PSVLEELKEKGIAREDQGALVVFFENDKLPPAI---V 300 Query: 325 LKSDGSYTYFAADLAYFKC-KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383 K DGS+ Y +DLA K K E D +Y+ + K++ + + E Sbjct: 301 QKKDGSFLYTTSDLATMKFRKDELNVDEAVYLTDDRQQNHFKQVFEIGEMLGEPYNYKKT 360 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416 + + + DGM S R+G+ I L ++DE Sbjct: 361 HVVFGIMRFGDGMI--FSSRSGNIIRLVDLLDEAKTQVKKVIDEKNPNIPEDEKENISEI 418 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 VGS ++++ L + + + F + KV + P Y+QY Y R SIFR+ K + Sbjct: 419 VGSGAIKYFDLSQNRTSDITFTWDKVLSFEGNTGP--YLQYTYVRIMSIFRKLK----EE 472 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + D+ N+I + E +L L +P+ + + + P +A YL+D+A +F+ Sbjct: 473 NIDVENENIIL--DDMTGIERELAAELLRFPQAVVKSYESYRPNIIADYLFDMAKLFNNF 530 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ ++ N+K+ R+ LV A ++ GL+++G+++ + M Sbjct: 531 YNSS------SILKEENKKVMDARILLVKKTAFVLKEGLSLLGIKTVDRM 574 >gi|284166430|ref|YP_003404709.1| arginyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511] gi|284016085|gb|ADB62036.1| arginyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511] Length = 595 Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 154/641 (24%), Positives = 273/641 (42%), Gaps = 104/641 (16%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 + L A+ L+ L E+D D + IE P + L+++ A L+ G Sbjct: 3 LALRAEVEDALERALSELDFPT-------DDLGIEEPPEDVDSVLASSVAFRLAGEAGAP 55 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKG-FINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +A + + D + +G ++N S +YL + L + YG L + Sbjct: 56 PPQVAGQLADELDADELTYVSEVQTQGPYLNFLPSDAYLAETLETATAET--YG-ALEDR 112 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 T V +E SANPTGP+HVG R ++GD +A+L+ ++GY+V R YY+NDAG Q+ Sbjct: 113 DTSVVVEHTSANPTGPVHVGRARNPIIGDAVANLLDYAGYDVDRHYYVNDAGRQMAVFTW 172 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS-- 237 S + + +A ++ + Y V G + + + E + I++ Sbjct: 173 S-YETFDEAELESEPERDRKEYDLVRYYRKGNAFLENGPEDEVEEAEAEIESIMQGLEAG 231 Query: 238 -----------VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286 V ++ + + L+ L + D F+ E F R D D +AR + Sbjct: 232 DDEAYERVSEVVDQVLGGMTECLERLPAEFDEFVKETRFMRNG-----DTDDLVARLKEL 286 Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346 E + + D QL G D + L+SDG+ Y DLA+ + K++ Sbjct: 287 DEAVY-----------EEDAWQLELEDH--GIDKNLVFLRSDGTSLYATRDLAHHEWKFD 333 Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406 +D + V+G DH ++L + + +L V L KMS R G Sbjct: 334 E-YDRAVTVLGEDHKLQARQLRTTLELLGNDTDGLRQVLYSYVNLPEG----KMSTRRGT 388 Query: 407 FITLRHVVDE---------------------------------VGSDSVRFMMLWRKNSE 433 + L ++DE VG +VR+ ++ ++ ++ Sbjct: 389 GVDLDDLLDEAIDRAREEVEDRLDDRIRDDDLNEDDIERIAHQVGIGAVRYDIVSKQPTK 448 Query: 434 LLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFP-------DLDFDLFPRNVI 485 + F++ + + +++ P YVQY +ARC I +A + P D++ + +++ Sbjct: 449 AITFEWDQALDFEAQSAP--YVQYVHARCCGILEEAG-LDPETALAAQDVELEALEADLL 505 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 ++E D L+ +A +P V++ A EP+++A Y + A F+ + RE P L Sbjct: 506 ETDAEHD-----LLETIARFPAVVDEAADDLEPHQIATYTREFADRFNAFY---RECPVL 557 Query: 546 RF-VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V + R+ RL LV A + + L+I+GVE+P M Sbjct: 558 SDDVDPDVRE---ARLALVAASKHTVANALSILGVEAPRSM 595 >gi|134045611|ref|YP_001097097.1| arginyl-tRNA synthetase [Methanococcus maripaludis C5] gi|166232803|sp|A4FXF3|SYR_METM5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|132663236|gb|ABO34882.1| arginyl-tRNA synthetase [Methanococcus maripaludis C5] Length = 566 Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 154/607 (25%), Positives = 266/607 (43%), Gaps = 118/607 (19%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I ++ P G STN + L++ L P IAE I + I ++ + A G+IN Sbjct: 25 IRLDEPPAINMGDYSTNISFRLAKDLKKAPKMIAEDIANSLSI-LGIEKIE-AVNGYINF 82 Query: 92 YLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +++ S + ++ +S I +G+ L + KV +E SANP GP H+GH R V+GD+L Sbjct: 83 FMNYSDFSKETVSKISAEKENFGK-LEKRDEKVILEHTSANPNGPFHIGHGRNMVIGDSL 141 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---DSDLPEGYYPGVYLK 207 ++ SGY+V +YY+ND G Q A+ VF + L + D + E Y L Sbjct: 142 KRILIASGYDVETQYYVNDMGRQ---EAIVVFGNERFELDKSKKADHAIGEVYVETNKLL 198 Query: 208 HVGKELADKYSSELLNFPE-----------EKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 +EL + + + N+ E EK+ V DYS+ ++ L LNI H Sbjct: 199 AENEELEQEILNLMKNYEEACEAGIENELTEKFKNAV-DYSLGGF----KETLSTLNIYH 253 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D F+ E +F + +RD+I L G V E +FR + Sbjct: 254 DKFVWESEFVKS--GMVRDVIKRLMDTGKVVE-------------------DEVFRLDLS 292 Query: 317 GDDVDRPLL--KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374 +++ L+ + +G+ Y D+ Y K E D + ++G+DH + A + Sbjct: 293 DYGLEKKLVLARLNGTSLYSTRDIVYHINKME-NCDFAVNLLGADHKLTAVMVNKTLALL 351 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS--------------- 419 +A+ V+ E + L M S R G FI++ + +E S Sbjct: 352 GYNEAE--VVFYEFISLPEGSM----STRRGRFISMDELFEEAKSRAAEEVRKRGVAENE 405 Query: 420 ------------DSVRFM---------MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 +VR+ M++R + E LDF+ PV +QYA+ Sbjct: 406 EEIEEIAKRIAVGAVRYNIVRIAPEKPMVFRWD-EALDFEKVGC-------PV--IQYAH 455 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 ARC I + I D +LF E + +E ++ L++ P+++E A ++P Sbjct: 456 ARCSRILENVETISND---NLFA-------YEMNENEKTIVKLLSKLPKIVEKAAEVRKP 505 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 +A Y+ D+A F+ +++ P L+ N + RL +V+ +++ + L+++G Sbjct: 506 QIVANYVLDVAQGFNKFYANC---PVLK---EENETIKNSRLAIVNTTKTVLENTLDLLG 559 Query: 579 VESPNEM 585 +E P +M Sbjct: 560 IEMPGKM 566 >gi|57641170|ref|YP_183648.1| arginyl-tRNA synthetase [Thermococcus kodakarensis KOD1] gi|68753983|sp|Q5JGH7|SYR_PYRKO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|57159494|dbj|BAD85424.1| arginyl-tRNA synthetase [Thermococcus kodakarensis KOD1] Length = 642 Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 160/632 (25%), Positives = 270/632 (42%), Gaps = 122/632 (19%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKI 101 G T + L+R P IAE +V R+K P+ A G+IN YL + K Sbjct: 44 GDFGTAVSFQLARVFRKAPKFIAEELVGRVKEKLPEEIRDVKAVNGYINFYLDYEFFGKA 103 Query: 102 L-SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 L I+ G +YG + +G G KV +E S NPT P+H+GH R AV+GDT+A +M GY Sbjct: 104 LVREILEKGEKYGESELGSGKKVIVEHTSVNPTKPLHMGHARNAVLGDTMARIMRKLGYT 163 Query: 161 VTREYYINDAGAQINTLALSVFWRY---QQALYNNDSDLPEGYYPGVYLKH--------V 209 V + YI+D G Q V W Y ++ +++L E ++ H V Sbjct: 164 VEVQNYIDDLGVQF----AQVLWGYLNLKEEFERIEAELREKGLKEDFIDHVMGLLYVEV 219 Query: 210 GKEL-----ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA---LNIQHDIFIS 261 K+L DK EL+ EE I + + +++R + + I +D+ Sbjct: 220 NKKLEENPEVDKEVRELMKKLEEGDNEIA-EVGRKLAERVVRAQMLTTYRMGITYDLLSW 278 Query: 262 EDDFHR-GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 E D + G +I+ + EG K MD ++L D+ Sbjct: 279 ESDIMKSGIFGEAYGLIEKNENFFWATEG-------KYKGAFVMDLRKLF-------PDM 324 Query: 321 DRPLL---KSDGSYTYFAADLAYFKCKYERGFDNMIYVM---------------GSDHSG 362 P L +SDG+ TY D+AY K+ + +M+Y + G + G Sbjct: 325 KNPFLVLRRSDGTATYTGKDIAYHLWKFGKVKADMLYKLWDRVEDHETWTTAPDGKEMPG 384 Query: 363 YVKRLEAVAAAVS--EKKAQINVLLCELVRLYRDGMPI--------------KMSKRAGD 406 R + V + +K Q+ + + + D S R G Sbjct: 385 KFGRADIVINVIGAEQKHPQMAIKYALQLLGFEDAAENFHHLAYEHVVRPEGSFSGRKGT 444 Query: 407 FITLRHVVDEVGSDSVRFM--MLWRKNSELLDFDFCKVKEQSKENPVFY----------- 453 ++ VDEV +++V+ ++ +KN L D + ++ E V Y Sbjct: 445 WVGF--TVDEVLNEAVQRARELVEQKNPNLSDEEKDEIAEAVGVGAVRYNLVKYSPDKVI 502 Query: 454 -----------------VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD---T 493 +QYA+ARC SI R+A++ + D+ N + ++++F Sbjct: 503 TFRWEDVLNFEGDSAPYLQYAHARCASILRKAEESGVETDW-----NALLEKADFSKLTN 557 Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553 E +LI LA++P V+E+A +P+ + YL +LAS+F+ + ++P L+ + Sbjct: 558 REKELIKFLAKFPEVLESAGRDVKPHLVPAYLNELASLFNRFYM---DHPVLKAEEG--- 611 Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL LV AV ++ +GL+++G+++P M Sbjct: 612 -IREERLLLVLAVKQVLRNGLDVLGIKAPERM 642 >gi|58699515|ref|ZP_00374239.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila ananassae] gi|58533969|gb|EAL58244.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila ananassae] Length = 151 Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 72/161 (44%), Positives = 96/161 (59%), Gaps = 10/161 (6%) Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 ML RKN +LDFDF KVKEQSK+NP+FYVQYA+AR S+ R A P D L Sbjct: 1 MLTRKNDMVLDFDFAKVKEQSKDNPIFYVQYAHARAHSLMRNAPKELPTADPSLLRTG-- 58 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 EL LI LA++P V+E A EP+++ FYL ++A FH W +G+ + + Sbjct: 59 --------GELFLIKTLAKWPDVVEIAARLCEPHRITFYLLEVAEAFHVLWGYGKSDLNM 110 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586 RF+ +N LT R+ LV A+A +I SGL+I +E EMS Sbjct: 111 RFILEDNLNLTAARMFLVQALAHVIASGLSIFNIEPLKEMS 151 >gi|242399898|ref|YP_002995323.1| Arginyl-tRNA synthetase [Thermococcus sibiricus MM 739] gi|259511659|sp|C5ZZZ3|SYR_THESM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|242266292|gb|ACS90974.1| Arginyl-tRNA synthetase [Thermococcus sibiricus MM 739] Length = 644 Score = 133 bits (334), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 165/676 (24%), Positives = 287/676 (42%), Gaps = 128/676 (18%) Query: 4 FADFSSRLKNYLKEIDCKI--KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 + D +++ LK I ++ K K I+ + + G +T A +L++ P Sbjct: 3 YDDIKAKVGELLKTIISEMLEKEGKTWEGEILFDETPNMEFGDFATTVAFLLAKVFKKAP 62 Query: 62 LTIAELIVARI--KIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIG 118 IA+ I + + K+ + V +AG G+IN +L K+ + I+ G +G + IG Sbjct: 63 RIIAQEIASNLEDKLPEYIAKVEVAGAGYINFFLDYEKFSKLTVKEILQKGEHFGESKIG 122 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 +G KV +E S NPT P+H+GH R AV+GDT+A +M GY V + YI+D G Q Sbjct: 123 EGKKVIVEHTSVNPTKPLHMGHARNAVLGDTVARIMRALGYNVEVQNYIDDLGVQF---- 178 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGV----YLKHVGKELADKYSSELLNFP--EEKWLPI 232 V W Y +S + E G+ L H L + ++ +P E + I Sbjct: 179 AQVLWGYLNMREEFESIIKELKEKGLSKEDILDHALGLLYVEVHKKMEEYPEVEREIRSI 238 Query: 233 VKDYS------VQAMMKIIRDDLKA-------LNIQHDIFISEDDFHRGDPSPIRDIIDN 279 +K+ + K+ D +KA L+I +D+ E D R Sbjct: 239 MKELEKEDNEISEKGRKLAEDVVKAQMKTTYRLSISYDLLSWESDIVRS----------- 287 Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQL-LFRSTMV---GD---DVDRP---LLKSDG 329 GI + + + Q ++ + GD D++ P L++SDG Sbjct: 288 ---------GIFEESYKRIQENSHFEWAQEGKYKGAFIMKLGDLFPDLENPDTVLIRSDG 338 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMG---SDHSGYV--KRLEAVAAAVSEKKAQINVL 384 + TY D+AY K+ + +M Y + +DH + K E + + + INV+ Sbjct: 339 TATYTGKDIAYHLWKFGKVSADMRYKVWDKINDHKTWTTAKDGERMPGRFANAEIVINVV 398 Query: 385 LCE----------LVRL------YRDGMPI----------KMSKRAGDFI--TLRHVVDE 416 E ++L Y + + K S R G +I T+ V+DE Sbjct: 399 GSEQRYEQMAVAYALKLLGYEEEYHNFHHLAYEHVVRPEGKFSGRKGTWIGFTVDEVLDE 458 Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 VG +VR+ ++ +++ F + V E+ Sbjct: 459 AVKRAKELVEEKNPSLSGEEKEKIAEIVGVGAVRYNLVKYSPEKIITFRWEDVLNFEGES 518 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 Y+QYA+ARC SI ++A + ++D D +N S+ D E +LI ++++P ++ Sbjct: 519 AP-YIQYAHARCASILKKAMEEGINIDKDALLKNA--DFSKLDNKEKELIKIISKFPEIV 575 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 + A +P+ LA Y +LA VF+ + P L+ + + +RL LV A + Sbjct: 576 KTAGRDIKPHLLATYANELAMVFNSFYMA---LPVLKAEEG----VRELRLLLVIATKQV 628 Query: 570 INSGLNIIGVESPNEM 585 + + L ++G+E+P M Sbjct: 629 LKNTLGLMGIEAPEVM 644 >gi|150399104|ref|YP_001322871.1| arginyl-tRNA synthetase [Methanococcus vannielii SB] gi|166232807|sp|A6UP37|SYR_METVS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|150011807|gb|ABR54259.1| arginyl-tRNA synthetase [Methanococcus vannielii SB] Length = 569 Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 156/617 (25%), Positives = 268/617 (43%), Gaps = 109/617 (17%) Query: 22 IKVEKKILD------RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID 75 + +EKK+LD I ++ P G STN A LS+ L P IAE I + + I Sbjct: 9 VAIEKKVLDLTGKQIEIRLDEPPSINMGDYSTNIAFRLSKELKKAPKIIAEEITSSLSI- 67 Query: 76 PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGKGTKVNIEFVSANPTG 134 P ++ + + G+IN ++ S K + + S E +G++ + K KV +E SANP G Sbjct: 68 PGIEKIE-SLNGYINFFMDYSVFSKETTLEINSKQENFGKSDL-KNKKVILEHTSANPNG 125 Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL---YN 191 P H+GH R V+GD+L ++ +GY V +YY+ND G Q A+ VF + L Sbjct: 126 PFHIGHGRNMVIGDSLKRILNAAGYTVETQYYVNDMGRQ---EAIVVFGNDRFKLDKSKK 182 Query: 192 NDSDLPEGYYPGVYLKHVGK-------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 +D + + Y L + + L Y + N E + K+ +V+ + Sbjct: 183 SDHAIGQTYVEANKLLNENEELEQEILNLMKNYEEAMENGIENEITEKFKN-AVEYALTG 241 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 ++ L LNI HD F+ E +F R +R++I+ L G V E D+ Sbjct: 242 FKETLSTLNIHHDKFVWESEFVRS--GLVRNVINRLMETGKVTEE-------------DV 286 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 R L + G + L + +G+ Y D+AY K E D + ++G+DH Sbjct: 287 YRLDL----SEFGIEKKLVLARLNGTSLYSTRDVAYHMTKME-NCDFAVNLLGADHKLTG 341 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------- 416 + A + +A+I + E + L MS R G FI++ + +E Sbjct: 342 IMVNKTLALLGYNEAEI--VFYEFISLPEGS----MSTRQGRFISMDELFEEAKLRAREE 395 Query: 417 ---------------------VGS---DSVRFM----MLWRKNSELLDFDFCKVKEQSKE 448 VG+ + VR M++R + E LDF+ Sbjct: 396 VKKREVAKTEEEIEEIAKKIAVGAVRYNIVRISPEKPMVFRWD-EALDFEKVGC------ 448 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 PV +QYA+ARC I + +LF E E +E ++ +++ P + Sbjct: 449 -PV--IQYAHARCSRILENCEPSGLVNSKNLF-------EYEMAENEKIIVKLISKLPEI 498 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 +E + ++P LA Y +LA F+ + + R ++ N + R+ +V++ Sbjct: 499 VEKSAEVRKPQILANYALELAQGFNKFYGN------CRILKEENETVRNSRIMIVNSTKL 552 Query: 569 IINSGLNIIGVESPNEM 585 ++ + L+++G+E P +M Sbjct: 553 VLENSLDLLGIEMPGKM 569 >gi|320102292|ref|YP_004177883.1| arginyl-tRNA synthetase [Isosphaera pallida ATCC 43644] gi|319749574|gb|ADV61334.1| arginyl-tRNA synthetase [Isosphaera pallida ATCC 43644] Length = 692 Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 156/623 (25%), Positives = 255/623 (40%), Gaps = 104/623 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ G++P +A + R+ + P + +AG GF+N+ L+ +L + L Sbjct: 94 GDYQANGCMAAAKTAGVNPRDLAAAVAQRVDLAPLANPPEVAGPGFLNITLTTPFLAETL 153 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 +VSG + G + ++F S N PMHVGH R V+GD LA + G++V Sbjct: 154 KHRLVSG-RLLDDCPGTPQTIIVDFSSPNVAKPMHVGHLRSTVIGDALARIFEALGHKVW 212 Query: 163 REYYINDAGAQINTLALSVFWRYQQ----------------ALYNNDSDLPE-----GYY 201 R+ ++ D GAQ + W Y+ LY +DL + G Sbjct: 213 RDNHLGDWGAQFGM----ILWGYRHLRDPIAYAKNPVRELARLYRKVNDLSKPAEELGEK 268 Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN--IQHDIF 259 LK + + D+ + +L + + P ++ V + K I L+ L + H Sbjct: 269 LDKVLKMLDEGRRDEAARLVLKLFDGRETPTPEE--VAKLSKRIASRLRVLQEKVAHARA 326 Query: 260 ISE------DDFHRGDPSPIR----------DIIDNLARQ------GYVYEGILPPPKSK 297 ++E H GDP R ++ + R+ + E P + Sbjct: 327 VTEATRRETAKLHAGDPENRRLWNEFMPHCLRALEAVYRRLDIRFDTQLGESFFDPMLAD 386 Query: 298 TTQKCDMDRKQLLFRS----TMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYERGF-D 350 D+ K L S + + + P L K DG+Y Y DLA K + E D Sbjct: 387 VV--ADLQAKGLAVESEGALAVFNEGANAPFLIRKRDGAYNYATTDLATIKHRVETYHPD 444 Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 ++YV+ S + K+L A A + V + L RDG P K RAGD + L Sbjct: 445 RVLYVVDHRQSDHFKQLFATARRWGYDTVDL-VHVSFGTILGRDGRPYKT--RAGDVVGL 501 Query: 411 RHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVK 443 ++DE VG +V++ L + + FD K+ Sbjct: 502 ESLLDEAVAQARKVVEENSPDLKPAEKAKVARIVGLGAVKYADLSQNRTSDYKFDLDKMT 561 Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHL 502 + N Y+QYAYAR RSIFR+ +D F + E F+ +E L V L Sbjct: 562 AMNG-NTATYLQYAYARNRSIFRKG-----GVDPAKFAKKAGSIELIFNHPAERGLAVKL 615 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 YP +E A +P L YL+ LA+ + + E P L+ +++ R+ + RL L Sbjct: 616 VRYPEAVELAAAELKPNILTDYLFQLATTYSSFFE---ECPVLK-AESDERRDS--RLAL 669 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 A + +GL ++G+ + + Sbjct: 670 CELTARTLKAGLGLLGIGTAERL 692 >gi|150402195|ref|YP_001329489.1| arginyl-tRNA synthetase [Methanococcus maripaludis C7] gi|166232804|sp|A6VFW2|SYR_METM7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|150033225|gb|ABR65338.1| arginyl-tRNA synthetase [Methanococcus maripaludis C7] Length = 566 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 153/609 (25%), Positives = 268/609 (44%), Gaps = 122/609 (20%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID--PDVDSVFIAGKGFI 89 I ++ P G STN + L++ L P IAE I + I +++V G+I Sbjct: 25 IRLDEPPAINMGDYSTNISFRLAKDLKKAPKVIAEDIANSLNISGIEKIEAV----NGYI 80 Query: 90 NLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 N +++ S + ++ +S I+ +G+ L + KV +E SANP GP H+GH R V+GD Sbjct: 81 NFFMNYSDFSKETVSKIIDEKENFGK-LEKRHEKVILEHTSANPNGPFHIGHGRNMVIGD 139 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---DSDLPEGYYPGVY 205 +L ++ SGY+V +YY+ND G Q A+ VF + L + D + E Y Sbjct: 140 SLKRILVASGYDVETQYYVNDMGRQ---EAIVVFGNEKFELDKSKKADHAIGEVYVETNK 196 Query: 206 LKHVGKELADKYSSELLNFPE-----------EKWLPIVKDYSVQAMMKIIRDDLKALNI 254 L +EL + + + N+ E EK+ V DYS+ ++ L LNI Sbjct: 197 LLAENEELEQEILNLMKNYEEACEAGIENELTEKFKNAV-DYSLGGF----KETLSTLNI 251 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 HD F+ E +F + +R++I L G V E +FR Sbjct: 252 YHDKFVWESEFVKS--GMVREVIKRLMDTGKVVE-------------------DEVFRLD 290 Query: 315 MVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372 + +++ L+ + +G+ Y D+AY K E D + ++G+DH + A Sbjct: 291 LSDYGLEKKLVLARLNGTSLYSTRDIAYHINKME-NCDFAVNLLGADHKLTAVMVNKTLA 349 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS------------- 419 + +A+ V+ E + L M S R G FI++ + +E S Sbjct: 350 LLGYNEAE--VVFYEFISLPEGSM----STRRGRFISMDELFEEAKSRAAEEVRKRGVAE 403 Query: 420 --------------DSVRFM---------MLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456 +VR+ M++R + E LDF+ PV +QY Sbjct: 404 SEEEIEEIAKKIAVGAVRYNIVRIAPEKPMVFRWD-EALDFEKVGC-------PV--IQY 453 Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 A+ARC I + I D +LF E + +E ++ L++ P+++E A + Sbjct: 454 AHARCSRILENVEIISND---NLFA-------YEMNENEKTIVKLLSKLPKIVEKAAEVR 503 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 +P +A Y+ D+A F+ +++ P L+ N+ + R+ +V+ ++ + L++ Sbjct: 504 KPQIVANYVLDVAQGFNKFYANC---PVLK---EENQIIKNSRIAIVNNTKMVLENTLDL 557 Query: 577 IGVESPNEM 585 +G+E P +M Sbjct: 558 LGIEMPGKM 566 >gi|268325386|emb|CBH38974.1| arginyl-tRNA synthetase, N-terminus [uncultured archaeon] Length = 507 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 142/514 (27%), Positives = 236/514 (45%), Gaps = 86/514 (16%) Query: 39 DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98 + H +++ A L+R P IAE IV + + + S +A +IN Y+S +L Sbjct: 29 ESEHADIASTVAFSLARVYKRAPKEIAEDIVNHLPAELTLISHAVATGPYINFYVSDFFL 88 Query: 99 RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158 K L + +G+E KG K+ IE SAN GP+H+GH R A++GD LA ++ +G Sbjct: 89 HKTLQRLR-AGLETVEK--NKG-KIIIEHTSANADGPLHIGHLRNAIIGDVLARVLKRAG 144 Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218 ++V +YY+ND G QI A++V+ + AL + + VY+ +EL + Sbjct: 145 FDVETQYYVNDLGRQI---AVAVWGAGRMALAADKK--ADHAVADVYIA-ANRELEE--H 196 Query: 219 SELLNFPEEKWL-------PIVKDYS--VQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 SE LN EE VK Y V + +++ LK LNI+HD+F+ E +F R Sbjct: 197 SEYLNAVEELMRKYEAGDDATVKRYETVVNTCLTGVKETLKRLNIKHDLFVLEGEFVR-- 254 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + +++ L ++G V +D LL + + G + + + +SDG Sbjct: 255 SGAVDAVVNELMQKGDV----------------KLDGTALLLQ--LEGIEKELVIKRSDG 296 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 + Y DLAY + K R D MI V G DH ++L A +S K + ++ V Sbjct: 297 TSLYTTRDLAYHRWKSNR-CDRMIDVFGKDHELVSQQLTKALALLSVKAPE--YVIFAFV 353 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422 L + +S RAG +I+ ++++ VG ++ Sbjct: 354 SL----LSGSLSTRAGRYISADELIEKIEERAYEAVEKRRDDLDEVKKPEIARMVGIGAL 409 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR--QAKDIFPDLDFDLF 480 R+ M+ + + FDF + K+ F VQYA+AR SI R AK D D++ Sbjct: 410 RYDMVKVSPDKHIVFDFDDALDIEKKGAPF-VQYAHARACSILRAAAAKGALTD---DVY 465 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514 ++ ++ SEL+LI L+++ +I + Sbjct: 466 DSALLRED-----SELELIKMLSKFEYLIAGVAL 494 >gi|313127564|ref|YP_004037834.1| arginyl-tRNA synthetase [Halogeometricum borinquense DSM 11551] gi|312293929|gb|ADQ68389.1| arginyl-tRNA synthetase [Halogeometricum borinquense DSM 11551] Length = 584 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 157/625 (25%), Positives = 264/625 (42%), Gaps = 134/625 (21%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG-F 88 D + +E P + L+++ A ++ +G P +A I I P +G + Sbjct: 25 DDLGVEEPPEDVPATLASSVAFRMASEVGAPPPKVAADIADAIDATPYTYLERAEPQGPY 84 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 +N ++S +Y + L + EYG +L G V IE SANPTGP+HVG R ++GD Sbjct: 85 VNFFVSDAYYAETLEA--GRDEEYG-HLPETGKDVVIEHTSANPTGPVHVGRARNPILGD 141 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEG-------- 199 +A ++ F+G +V R YY+NDAG Q+ +VF W Y+ ++S+LPE Sbjct: 142 AIARVLEFAGNDVDRHYYVNDAGRQV-----AVFTWAYETF---DESELPEPERDRSDYD 193 Query: 200 ---YY--PGVYLKHV-----------------GKELADKYSSELLNFPEEKWLPIVKDYS 237 YY YL+ G E D+ + E + +V D Sbjct: 194 LVRYYRKGNAYLEDADEDEVEAAEAEIAEIMQGLEAGDEETYERV--------AVVVDQV 245 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHR-GDPSPIRDIIDNLARQGY-VYEGILPPPK 295 + M R+ L+ L D FI E F R GD D+++ L Y VYE Sbjct: 246 LGGM----RESLERLPAFFDEFIKETKFIRNGDAD---DVVERLKDSEYAVYE------- 291 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 +D + F +V L+SDG+ Y DLA+ + K+ +D + V Sbjct: 292 ---EDAWQLDLSEFGFEKNLV-------FLRSDGTTLYTTRDLAHHEWKF-NNYDEAVTV 340 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 +G DH ++L+A + Q+ V L GM S R G + L ++D Sbjct: 341 LGEDHKLQAEQLDAALEILGNDTDQLRQTFYSWVNLPEGGM----STRKGTGVDLDDLLD 396 Query: 416 E---------------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442 E VG +VR+ ++ ++ ++ + F++ + Sbjct: 397 ESVKRAREEVEERLDSRIRDDDLDEEDIERIARQVGIGAVRYDIVSKQPTKGITFEWERA 456 Query: 443 KE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT-SELQLIV 500 + +++ P YVQY +ARC I +A + ++ S DT +E +L+ Sbjct: 457 LDFEAQSAP--YVQYVHARCCGILNEASAAGIEAATEM---------SLLDTEAEQELLR 505 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 +A +P V+E A EP+ +A Y+ + A F+ + + A++ + RL Sbjct: 506 VIARFPAVVEQAADDLEPHVVATYVREFAETFNTFYRE------CSVLNADDDDIAAARL 559 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 LV A + + L ++G+E+P M Sbjct: 560 GLVEAAQHTVANALYMLGIEAPESM 584 >gi|119872100|ref|YP_930107.1| arginyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184] gi|166232829|sp|A1RS32|SYR_PYRIL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|119673508|gb|ABL87764.1| arginyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184] Length = 632 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 138/541 (25%), Positives = 242/541 (44%), Gaps = 103/541 (19%) Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL--SVF 182 +E SANP P+H+GH R A++GD+L L+ F G V +Y++D G Q+ A+ +V Sbjct: 115 VEHTSANPIHPLHIGHGRNAILGDSLVRLLRFCGNVVQSHFYVDDCGVQVMYAAIGYNVV 174 Query: 183 WRY-QQALYNNDSDLPEG-YYPGV--------YLKHVGKELADKYSSELLNFPEEKWLPI 232 +Y + L D+ G Y V K + KE D+ E++N + W+ + Sbjct: 175 KKYVDEVLKRTKPDVVIGAIYSAVNAIAEINRLKKELEKEKDDEKRREIIN-EIDSWVSV 233 Query: 233 VK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP---IRDII--------D 278 +K D + + K++ + L NI + + GDP +R+++ + Sbjct: 234 LKRLIDTEGEVINKLV-EVLGQRNIVEEAAELNKRYETGDPEVKKIVREVVELVLKGQRE 292 Query: 279 NLARQGY------------VYEG----ILPPPKSKTTQKCDMDRKQLLFRSTMVGDD--- 319 LAR G V+ G ++ + + Q D ++FR+ +D Sbjct: 293 TLARLGIELDSWDYESDIAVWSGEATRVVSELRRRWPQYIDDRGGAVVFRADKFVEDFKL 352 Query: 320 ---VDRP-------LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369 +D P L +SDG+ Y D+AY + RGFD +I V+ ++ + + Sbjct: 353 WDVLDLPKFIPPVTLTRSDGTTLYVTRDVAYALWQARRGFDKVIRVISTEQTHEQAHVRI 412 Query: 370 VAAAVSEKKAQINVL--LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------- 416 + A+ + ++ E+V L GM KMS R G +I+L ++DE Sbjct: 413 ILYALGYEDVAKKLIHYAYEMVNL--PGM--KMSARRGQYISLDEILDEAVERSADLVKE 468 Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 VG SVR+ L + ++F + V ++N ++QY Y R SI Sbjct: 469 KNPEIAGIIAERVGVGSVRYAFLSTSPRKPIEFKWETVLNM-RQNSGPFLQYTYVRAYSI 527 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 +A++I DL P+ ++P+E E LI+ +AE+P V+ AT A P +A + Sbjct: 528 LEKAQEI--DLKKVAIPKEILPEERE-------LILKVAEWPSVVREATRALRPDYVAEF 578 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 L LA +F+ ++ P L+ + RL LV++V +++ +G I+G+ + + Sbjct: 579 LDGLALIFNSYYEKA---PVLK----TEEPVRSFRLALVNSVKTVLAAGFYILGIPTLTK 631 Query: 585 M 585 M Sbjct: 632 M 632 >gi|240102754|ref|YP_002959063.1| arginyl-tRNA synthetase [Thermococcus gammatolerans EJ3] gi|239910308|gb|ACS33199.1| Arginyl-tRNA synthetase (argS) [Thermococcus gammatolerans EJ3] Length = 640 Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 158/633 (24%), Positives = 268/633 (42%), Gaps = 126/633 (19%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKI 101 G T A L+R P IAE +V RI+ P+ A G+IN Y+ SY R++ Sbjct: 44 GDFGTAVAFQLARVFRKAPKLIAEELVERIE-KPEGIVEVKAVNGYINFYVDYSYFGREL 102 Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161 + I+ G YG + +GKG KV +E S NPT P+H+GH R AV+GDT+A +M GY+V Sbjct: 103 VREILGKGEAYGESELGKGRKVIVEHTSVNPTKPLHMGHARNAVLGDTMARIMRRLGYKV 162 Query: 162 TREYYINDAGAQINTLALSVFWRY---QQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218 + YI+D G Q V W Y ++ +++L E ++ HV L + + Sbjct: 163 EVQNYIDDLGVQF----AQVLWGYLNMKEEFERIEAELREKGLKEDFIDHVMGLLYVEVN 218 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDD---------------LKA-------LNIQH 256 + PE D V+ +MK + + +KA + I + Sbjct: 219 KRIEENPE-------VDKEVRELMKKLEEGNNEIAEIGRKLAERVVKAQMLTTYRMGIAY 271 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D+ E D R I + R E + K MD ++L Sbjct: 272 DLLSWESDIMRS------GIFEEAYRLIEANENFFWGREGKYKGAFVMDLRKLF------ 319 Query: 317 GDDVDRPLL---KSDGSYTYFAADLAYFKCKYERGFDNMIYVM---------------GS 358 D+ P L +SDG+ TY D+AY K+ + +M+Y + G Sbjct: 320 -PDMKNPFLVLKRSDGTATYTGKDIAYHLWKFGKVKADMLYKLWDKRENHETWTTAPDGE 378 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL--YRDGM--------------PIKMSK 402 + G R + V + ++ + + ++L + D K S Sbjct: 379 EMPGRFGRGDIVINVIGAEQRHPQMAIKYALQLLGFEDSAENFHHLAYEHVVRPEGKFSG 438 Query: 403 RAGDFITLRHVVDEVGSDSVRFM--MLWRKNSELLDFDFCKVKEQSKENPVFY--VQYA- 457 R G ++ VDEV +++V+ ++ +KN L + + ++ E V + V+Y+ Sbjct: 439 RKGTWVGF--TVDEVLNEAVQRARELVEQKNPNLSEEEKDEIAEAVGVGAVRFNLVKYSP 496 Query: 458 -------------------------YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492 +ARC SI R+A++ + +++ S+ Sbjct: 497 DKIITFRWDDVLNFEGESAPYIQYAHARCASILRKARESGVETEWEKLLEKA--DFSKLT 554 Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552 E +LI LA++P VIE+A +P+ + YL +LAS+F+ + ++P L+ Sbjct: 555 LREKELIKLLAKFPEVIESAGRDIKPHLVPAYLNELASLFNKFYM---DHPVLKAEDG-- 609 Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL LV AV ++ +GL ++G+E+P +M Sbjct: 610 --IREERLLLVLAVKQVLRNGLELLGIEAPEKM 640 >gi|153865014|ref|ZP_01997700.1| Arginyl-tRNA synthetase [Beggiatoa sp. SS] gi|152145491|gb|EDN72300.1| Arginyl-tRNA synthetase [Beggiatoa sp. SS] Length = 222 Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 70/164 (42%), Positives = 100/164 (60%), Gaps = 2/164 (1%) Query: 51 MILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSG 109 MIL++ L + P +A I+ + ID + + V IAG GFIN++L+ R ++ I+ + Sbjct: 1 MILAKALKMRPRDLAARIIEHLSIDDELIAKVEIAGPGFINVFLTLKAYRAVIDDILTAQ 60 Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169 YGR+ +G G V IEFVSANPTGP+HVGH R A G LA L+ +G++V +EYY+ND Sbjct: 61 TAYGRSQMGAGQSVMIEFVSANPTGPLHVGHGRGAAYGAALAHLLTTAGFKVHQEYYVND 120 Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 AG Q++ LALSV+ RY + L P Y G Y+ + L Sbjct: 121 AGRQMDILALSVWLRYLE-LCGESVIFPANAYQGDYVWDIAASL 163 >gi|45358589|ref|NP_988146.1| arginyl-tRNA synthetase [Methanococcus maripaludis S2] gi|74554456|sp|Q6LYG5|SYR_METMP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|44921347|emb|CAF30582.1| Arginyl-tRNA synthetase [Methanococcus maripaludis S2] Length = 566 Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 148/602 (24%), Positives = 266/602 (44%), Gaps = 108/602 (17%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I ++ P G STN + L++ L P IAE I + I ++ + A G+IN Sbjct: 25 IRLDEPPAINMGDYSTNISFRLAKDLKKAPKMIAEDIANSLSI-LGIERIE-AVNGYINF 82 Query: 92 YLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +++ S + ++ +S I +G+ L + KV +E SANP GP H+GH R V+GD+L Sbjct: 83 FMNYSDFSKETVSKISDEKENFGK-LEKRNEKVILEHTSANPNGPFHIGHGRNMVIGDSL 141 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN---DSDLPEGYYPGVYLK 207 ++ SGY+V +YY+ND G Q A+ VF + L N+ D + E Y L Sbjct: 142 KRILIASGYDVETQYYVNDMGRQ---EAIVVFGNEKFELDNSKKADHAIGEVYVETNKLL 198 Query: 208 HVGKELADKYSSELLNFPE------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 +EL + + + N+ E L +V + ++ L LNI HD F+ Sbjct: 199 AENEELEQEILNLMKNYESACEAGIENELTEKFKNAVNYSLGGFKETLLTLNIYHDKFVW 258 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E +F + +R++I+ L G V E ++R + ++ Sbjct: 259 ESEFVK--SGMVREVINRLMNTGKVVE-------------------DEVYRLDLSDYGIE 297 Query: 322 RPLL--KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 + L+ + +G+ Y D+AY K E D + ++G+DH + A + +A Sbjct: 298 KKLVLARLNGTSLYSTRDIAYHITKME-NCDFAVNLLGADHKLTAVMVNKTLALLGYNEA 356 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS-------------------- 419 + V+ E + L M S R G FI++ + +E S Sbjct: 357 E--VVFYEFISLPEGSM----STRKGRFISMDELFEEAKSRAAEEVRKRGVAQSEEEIEE 410 Query: 420 -------DSVRFM---------MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463 +VR+ M++R + E LDF+ PV +QYA+ARC Sbjct: 411 IAKKIAVGAVRYNIVRIAPEKPMVFRWD-EALDFEKVGC-------PV--IQYAHARCSR 460 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I ++I + +LF ++ + +E ++ L++ P+++E A ++P +A Sbjct: 461 ILENVENISNE---NLFAYDM-------NENEKTIVKLLSKLPKIVEKAAEVRKPQIVAN 510 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+ D+A F+ +++ P L+ N + RL +V +++ + L+++G+E P Sbjct: 511 YVLDVAQGFNKFYANC---PVLK---EENETVKNSRLAIVSTTKTVLENTLDLLGIEMPG 564 Query: 584 EM 585 +M Sbjct: 565 KM 566 >gi|254166583|ref|ZP_04873437.1| arginyl-tRNA synthetase [Aciduliprofundum boonei T469] gi|289596239|ref|YP_003482935.1| arginyl-tRNA synthetase [Aciduliprofundum boonei T469] gi|197624193|gb|EDY36754.1| arginyl-tRNA synthetase [Aciduliprofundum boonei T469] gi|289534026|gb|ADD08373.1| arginyl-tRNA synthetase [Aciduliprofundum boonei T469] Length = 550 Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 146/563 (25%), Positives = 248/563 (44%), Gaps = 83/563 (14%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112 L++ + +P IA+ I ++K D + + G ++N ++ L ++ ++SG + Sbjct: 41 LAKEMKKNPALIAKDIAEKLK-DEYFEKIEAVGP-YVNFWIHTRKLAELTLQEILSGEIF 98 Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172 K KV +E SANPTGP+HVG R +++GD+LA +M GY+V +Y++ND G Sbjct: 99 K---FQKREKVIVEHTSANPTGPLHVGRTRNSIIGDSLARVMRKYGYDVEVQYFVNDVGK 155 Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW--- 229 Q+ TL + + + + D Y Y + +EL +K E W Sbjct: 156 QVATLLWGI-----KNIKIEEKDTRGDYRYVPYYQAAYREL-EKNPKIEEEIQEIIWKYE 209 Query: 230 -----LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG 284 L + + V +++K I + LK +NI D FI E + RD+ D+L + Sbjct: 210 RGDEELRKMAEKYVGSVLKGIEESLKNINIHFDSFIWESSL----VNRARDVADSL--KD 263 Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP-LLKSDGSYTYFAADLAYFKC 343 Y+ E +D K+L DR L + DG+ Y D+AY Sbjct: 264 YLKE---------DDGAFYIDLKELGVEGK------DRLYLFRRDGTTLYPLRDIAYHLL 308 Query: 344 KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK- 402 K ER N + V+G DH + + ++ + ++E +++ L V+L M + K Sbjct: 309 KGERARKN-VDVLGEDHKLHFQAIKKIVEILNE-NIELDALFYSFVKLPEGKMSTRQGKV 366 Query: 403 ------------RAGDFITLRHVVDE--------VGSDSVRFMMLWRKNSELLDFDFCKV 442 R + I R E + ++RF +L + + + F + Sbjct: 367 VYLDDLLKEAEARVNEIIKNREYEKEEMEKIRRAIAVGAIRFHILNVQEEKPMTFRWEDA 426 Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 E+ F +QY +AR SI R+ + + D PQ E++L+ + Sbjct: 427 LNFEGESAPF-IQYTHARAASILRKT-NWNGEYSIDYISH---PQ-------EIKLLKLM 474 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 A+YP ++ENA PY +A Y Y LAS F+ + R+ P L+ N R RL + Sbjct: 475 AKYPSMVENAVRRLSPYIMARYAYTLASQFNQFY---RDCPVLK-ADDNTRN---TRLAI 527 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 V A +I L ++G+E+P +M Sbjct: 528 VKAFKKLIKDVLELLGIEAPEKM 550 >gi|16332034|ref|NP_442762.1| arginyl-tRNA synthetase [Synechocystis sp. PCC 6803] gi|2501048|sp|Q55486|SYR_SYNY3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|1001346|dbj|BAA10833.1| arginyl-tRNA-synthetase [Synechocystis sp. PCC 6803] Length = 584 Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 151/585 (25%), Positives = 249/585 (42%), Gaps = 82/585 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N A+ L++ LG P IA IV ++ + + + IAG GFIN+ L P YL + L Sbjct: 40 GDFQCNIALPLAKQLGQPPRAIAMEIVDKVNLSEICEPLTIAGPGFINIKLLPDYLGEQL 99 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + + G +L+ ++ ++F S N MHVGH R ++GD LA ++ F GY+V Sbjct: 100 IKLQ-QNQQLGVSLVKGEERIVVDFSSPNIAKEMHVGHLRSTIIGDCLARVLEFRGYDVL 158 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222 R ++ D G Q L + Y +AL D+ +G +L Y Sbjct: 159 RLNHVGDWGTQFGMLITYLKEVYPEALVTADA------------LDIG-DLVTFYKQAKQ 205 Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLA 281 F +++ ++ S QA++ + D K++ + E R + I D +D + Sbjct: 206 RFDQDEQF---RETSRQAVVALQAGDAKSIKAWQ--LLCEQ--SRREFQLIYDCLDITIE 258 Query: 282 RQGYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMVGDDVDR-PLL--KSDGSYTYF 334 +G + P + Q+ D+ + Q +F D DR PL+ KSDG Y Y Sbjct: 259 ERGESFYNPFLPGVVELLQEKDLLVEDNGAQCVFLDGFTNKDGDRLPLIVQKSDGGYNYA 318 Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRL 391 DLA + G + +IYV + + + + VA A + Q+ + LV+ Sbjct: 319 TTDLAALNYRLNTDGAEKIIYVTDAGQANHFAQFFQVAEKAGILTDPTQVVHVPFGLVK- 377 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDE-------------------------------VGSD 420 DG K+ RAGD I L+ ++ E VG Sbjct: 378 GEDGK--KLKTRAGDTIRLKDLLTEAVTRARQDLETRLTAEERSETEEFKTEVAQRVGIG 435 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +V++ L + + F F K+ + N Y+ YAYAR +SI R+ F +D Sbjct: 436 AVKYADLSQNRTSDYVFSFDKMLA-LQGNTAPYMLYAYARIQSISREGGIDFAQMD---- 490 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 ++ E +EL L +L ++ VIE I+ P +L YLY+L+ VF+ + + Sbjct: 491 SGEIVLTEP----TELVLAKNLLQFADVIETVEISLLPNRLCDYLYELSKVFNRFYEN-- 544 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P L+ RL L A + GL+++G+ + M Sbjct: 545 -CPVLKASDPQRGS----RLLLCDLTARTLKLGLSLLGIPVLDRM 584 >gi|90408772|ref|ZP_01216917.1| arginyl-tRNA synthetase [Psychromonas sp. CNPT3] gi|90310116|gb|EAS38256.1| arginyl-tRNA synthetase [Psychromonas sp. CNPT3] Length = 582 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 140/607 (23%), Positives = 255/607 (42%), Gaps = 99/607 (16%) Query: 28 ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87 I R+VI+R +D +HG ++N A++L++P +P +AELIV + + IAG G Sbjct: 26 IQPRLVIDRTKDKSHGDFASNLALMLAKPAKQNPRALAELIVKNLPTSDIIIKTEIAGPG 85 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FIN +++P+YL K + S S L V I++ S N MHVGH R ++G Sbjct: 86 FINFFINPNYLEKQIDSAYASE-RLDVELTEVPQTVVIDYSSPNLAKEMHVGHLRSTIIG 144 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTL-------------------ALSVFWRYQQA 188 D++ + F G V R+ ++ D G Q L L VF+R + Sbjct: 145 DSVVRALEFQGNNVVRQNHVGDWGTQFGMLLAYMEELRAEGQEIKKDLANLEVFYRAAKC 204 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI--VKDYSVQAMMKIIR 246 ++ E +H+ EL + L+ + E K + I +D + + + R Sbjct: 205 RFDESEAFAE------RARHLVVELQNGNEECLVLWTEFKEISISHCQDAYRRLGVSLER 258 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 D++ + +D + ++I +L +G + E S+ +DR Sbjct: 259 KDVRGESAYND--------------DLSNVIRDLKEKGLLQE-------SQGANVVFLDR 297 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVK 365 F++ G+ + + K DG + Y +DLA + + + ++Y + + + + Sbjct: 298 ----FKNKE-GEPLPVIIQKKDGGFLYATSDLAAIRYRQSVLNANRVLYFVDARQGLHFQ 352 Query: 366 RLEAVA--AAVSEKKAQINVLLCELVRLYRDGMPIKM----SKRAGDFIT---------- 409 ++ VA A+ ++ + + V + DG P K + + D +T Sbjct: 353 QVFEVARLASFVKETTPLEHMAFGTV-MGEDGKPFKTRTGSTPKLADLLTEAEERAYVLV 411 Query: 410 -----------LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 LRH+ VG SV++ L + + F+F + + N Y+ YAY Sbjct: 412 KEKNQDMPEDELRHIAAVVGIASVKYADLSKNRTSDYVFNFDSML-SFEGNTAPYLLYAY 470 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 R SIF++AK +D D +++ S D E L + ++ +I+ T P Sbjct: 471 TRVASIFKKAK-----IDMDSITQDI----SFTDEKEKDLANKIMQFNEIIKQVTKQGMP 521 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 + L YL++LA +F + + A RL+L A + GL+++G Sbjct: 522 HFLCSYLFELAGLFSSFYEA------CPILSAPTEAQKQSRLKLAALTAKTLKQGLSLLG 575 Query: 579 VESPNEM 585 + + M Sbjct: 576 INTLERM 582 >gi|289581095|ref|YP_003479561.1| arginyl-tRNA synthetase [Natrialba magadii ATCC 43099] gi|289530648|gb|ADD04999.1| arginyl-tRNA synthetase [Natrialba magadii ATCC 43099] Length = 600 Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 153/620 (24%), Positives = 255/620 (41%), Gaps = 108/620 (17%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG-F 88 D + IE P + L+++ A L+ G P +A + I D + +G + Sbjct: 25 DDLGIEEPPEDVESVLASSVAFRLAGEAGAAPPQVAGQLADEIDTDELTYVAVVQTQGPY 84 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 +N S +YL L + + +YG +L + V +E SANPTGP+HVG R ++GD Sbjct: 85 LNFLPSDAYLATTLET--ATEADYG-HLDDREESVVVEHTSANPTGPVHVGRARNPIIGD 141 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN----------DSDLPE 198 +A+L+ +GY+V R YY+NDAG QI T W Y+ + + DL Sbjct: 142 AVANLLDAAGYDVERHYYVNDAGRQIATFT----WAYETFDEEDLEDEPERDRIEYDLVR 197 Query: 199 GYYPGVYLKHVGKELA--------DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250 Y G G E + L EE + + + V ++ + + L Sbjct: 198 YYRKGNAFLEDGPEDEVEDAEAEIEAIMQGLEEGNEEAYDRVSE--VVDQVLGGMTECLA 255 Query: 251 ALNIQHDIFISEDDFHR-GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 L + D F+ E F R GD + D + L VYE D QL Sbjct: 256 RLPAEFDEFVKETQFMRNGDTDALVDRLQELDEA--VYED---------------DAWQL 298 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369 G D + L+SDG+ Y DLA+ + K+E +D + V+G DH +L Sbjct: 299 ELDDH--GIDKNLVFLRSDGTTLYTTRDLAHHEWKFEN-YDRAVTVLGEDHKLQADQLGQ 355 Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------- 416 + Q+ ++ V L + MS R G + L ++DE Sbjct: 356 TLELLGNDTDQLENVIFSWVNL---PGGLGMSTRKGTGVDLDDLLDEAIDRAREEVEDRL 412 Query: 417 --------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQ 455 VG +VR+ ++ ++ ++ + F++ + + +++ P YVQ Sbjct: 413 DDRIRDDDLDEEDIERIAHQVGIGAVRYDIVSKQATKAITFEWDQALDFEAQSAP--YVQ 470 Query: 456 YAYARCRSIFRQ----------AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 Y +ARC I + A LD D +++ +E D L+ +A + Sbjct: 471 YVHARCCGILEEAGFDPTEPLAAAGQAESLDLDAIDADLLETPAEQD-----LLETIARF 525 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 P V++ A EP+++A Y + F+ + RE P L + ++ RL LV A Sbjct: 526 PAVVDEAASDLEPHQIATYTREFGDRFNTFY---RECPVL--ADDVDPEVRETRLALVAA 580 Query: 566 VASIINSGLNIIGVESPNEM 585 I + L+++GV +P M Sbjct: 581 SKHTIANALSVLGVAAPRSM 600 >gi|227513564|ref|ZP_03943613.1| arginyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577] gi|227083437|gb|EEI18749.1| arginyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577] Length = 568 Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 152/591 (25%), Positives = 264/591 (44%), Gaps = 94/591 (15%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +E+P+ + G L+ A L++ P IA +V+ KID A +IN +L Sbjct: 33 LEQPKSLSMGDLAF-PAFSLAKVFHKAPNQIAADLVS--KIDQTSYEKVEAKGAYINFFL 89 Query: 94 SPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 + ++L++I+ G YG+N GKG V I+ S N P+ +GH R V+G+++A Sbjct: 90 DKGKFSGQVLTTIIEEGSTYGQNDNGKGGNVPIDMSSPNIAKPISMGHLRSTVIGNSIAK 149 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 L+ +GY ++ ++ D G Q L ++ Y++ + N+ D+ + + +V Sbjct: 150 LLVKNGYHPIKDNHLGDWGTQFGKLIVA----YKK--WGNEDDVKKDPINNLVKYYVKFH 203 Query: 213 LADKYSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 DK EL + E K L + + R L++ N +D D G+ Sbjct: 204 KEDKEHPELDDEARETFKKLEDGNEEETELWKWFRRVSLESFNKIYDKLGVTFDTFNGEA 263 Query: 271 ---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP--LL 325 + + I L +G + E S+ Q +D+ +L P +L Sbjct: 264 FYNDKMDEGIQILKEKGLLVE-------SQGAQVVKLDKYKL------------NPALIL 304 Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG+ Y D+A Y Y+ + +YV+GS+ + Y K+L+AV + + A+ N Sbjct: 305 KSDGATLYITRDIATAIYRDRTYKPAMN--LYVVGSEQTYYFKQLKAVLLEMGLQSAE-N 361 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------------------------EV 417 + + +G K+S R+G I L V+D EV Sbjct: 362 LHHIPFGLITVNGK--KLSTRSGRIILLDEVLDDAINLAKKQIEAKNPDLEDKDEVAKEV 419 Query: 418 GSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 G ++ F L KN + DF ++K + + P YVQY++AR SI ++A I Sbjct: 420 GVGAIIFGDL--KNERTNNIDFVLEDQLKFEGETGP--YVQYSHARAESILKKASSI--- 472 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 DF + + D + + + L E+P V+E+A EP ++A Y LA F+ Sbjct: 473 -DFHTTDKELD------DPAAWETVTALNEFPHVVESACKDFEPSEVAKYSLKLAKAFNK 525 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H + V + KL RL LV +V+ ++ LN++GV++P+ M Sbjct: 526 YYAHSK-------VLVEDDKLG-ARLALVKSVSIVLKESLNLLGVKAPDAM 568 >gi|256847531|ref|ZP_05552977.1| arginyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN] gi|256716195|gb|EEU31170.1| arginyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN] Length = 563 Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 159/597 (26%), Positives = 259/597 (43%), Gaps = 105/597 (17%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 IERP+D +G + L++ L P IA+ ++A+I + V +AG +IN +L Sbjct: 27 IERPKDSNNGDYAF-PTFFLAKTLHKAPQIIAQELLAKID-QTGFEKVVVAGP-YINFFL 83 Query: 94 SPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 + IL +I+ YG +G V I+ S N PM +GH R V+G+ +A+ Sbjct: 84 DKQVVGENILKTILADPENYGSQDLGHLANVAIDLSSPNIAKPMGMGHLRSTVIGNAIAN 143 Query: 153 LMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG- 210 ++A GY R ++ D G Q L A W ++ + + + + YY + + Sbjct: 144 ILAKVGYNPIRINHLGDWGTQFGKLMAAYEMWGNEEEVQQDPINTLQKYYVKINTEADTH 203 Query: 211 ---KELADKYSSELLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262 +L ++ L N E KW + S++ MKI R L+I D + E Sbjct: 204 PEYNDLGREWFKNLENGDPEAYRLWKWF---RAESLKRFMKIYR----LLDIDFDSYNGE 256 Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322 F+ + ID L + ++ + +SK Q D+++ L Sbjct: 257 -AFYNDKMAE----IDQLLQDKHLLQ------ESKGAQIVDLEKYNL------------N 293 Query: 323 PLL--KSDGSYTYFAADL--AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EK 377 P L KSDGS Y DL A F+ K GF +YV+G++ + +L+AV + + Sbjct: 294 PALIKKSDGSSLYITRDLSAALFR-KRMYGFAQALYVVGAEQRNHFDQLKAVFSEMGFTW 352 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD---------------------- 415 QI+ + L+ L +G KMS R G+ + L V++ Sbjct: 353 SKQIHYIPFGLMSL--NGK--KMSTRKGNIVQLEDVLNDSIKLARQQIAEKNPELQNADE 408 Query: 416 ---EVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 +VG +V F L + + +DF VK + + P YVQYA+AR SI R+A Sbjct: 409 VARQVGVGAVIFHDLKNERTNSIDFKLADVVKFEGETGP--YVQYAHARAESILRKAGT- 465 Query: 472 FPDLDFDLFPRNVIPQESEFDTS---ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 PD Q S ++ L +Y VIE A +P + Y L Sbjct: 466 -PDF----------AQAESLALSGDEAWGILTRLGQYGEVIERAANEYDPSLVGKYALAL 514 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A F+ +++H R + ++ K M RL LV AV+ ++ S L ++GV++P+EM Sbjct: 515 AKDFNQYYAH------TRILVDDDEK--MARLALVKAVSEVLKSSLALLGVKAPDEM 563 >gi|254167275|ref|ZP_04874127.1| arginyl-tRNA synthetase [Aciduliprofundum boonei T469] gi|197623538|gb|EDY36101.1| arginyl-tRNA synthetase [Aciduliprofundum boonei T469] Length = 550 Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 146/565 (25%), Positives = 253/565 (44%), Gaps = 87/565 (15%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112 L++ + +P IA+ I ++K D + + G ++N ++ L ++ ++SG + Sbjct: 41 LAKEMKKNPALIAKDIAEKLK-DEYFEKIEAVGP-YVNFWIHTRKLAELTLQEILSGEIF 98 Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172 K KV +E SANPTGP+HVG R +++GD+LA +M GY+V +Y++ND G Sbjct: 99 K---FQKREKVIVEHTSANPTGPLHVGRTRNSIIGDSLARVMRKYGYDVEVQYFVNDVGK 155 Query: 173 QINTLALSVFWRYQQ-ALYNNDSD-----LPEGYYPGVYLKHVGKELADKYSSELLNFP- 225 Q+ TL W + + D+ +P YY Y + V K + + + + Sbjct: 156 QVATL----LWGIKNIKIEEKDTRGDYRYVP--YYQAAY-REVEKNPKIEEEIQEIIWKY 208 Query: 226 ---EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282 +EK + + Y V +++K I + LK +NI D F+ E + RD+ D+L Sbjct: 209 ERGDEKLRKMAEKY-VGSVLKGIEESLKNINIHFDSFVWESSL----VNRARDVADSL-- 261 Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP-LLKSDGSYTYFAADLAYF 341 + Y+ E +D K+L DR L + DG+ Y D+AY Sbjct: 262 KDYLKE---------DDGAFYIDLKELGVEGK------DRLYLFRRDGTTLYPLRDIAYH 306 Query: 342 KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401 K E+ N + V+G DH + + ++ + ++E +++ L V+L M + Sbjct: 307 LLKGEKARKN-VDVLGEDHKLHFQAIKKIVEILNE-NIEVDALFYSFVKLPEGKMSTRQG 364 Query: 402 K-------------RAGDFITLRHVVDE--------VGSDSVRFMMLWRKNSELLDFDFC 440 K R + I R E + ++RF +L + + + F + Sbjct: 365 KVVYLDDLLKEAEARVNEIIKNREYEKEEMEKIRRAIAVGAIRFHILNVQEEKPMTFRWE 424 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500 E+ F +QY +AR SI R+ + + D PQ E++L+ Sbjct: 425 DALNFEGESAPF-IQYTHARAASILRKT-NWNGEYSIDYISH---PQ-------EIKLLK 472 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 +A+YP ++ENA PY +A Y Y LAS F+ + R+ P L+ N R RL Sbjct: 473 LMAKYPSMVENAVRRLSPYIMARYAYTLASQFNQFY---RDCPVLK-ADDNTRN---TRL 525 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 +V A +I L ++G+E+P +M Sbjct: 526 AIVKAFKKLIKDVLELLGIEAPEKM 550 >gi|227510555|ref|ZP_03940604.1| arginyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190207|gb|EEI70274.1| arginyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 568 Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 152/591 (25%), Positives = 264/591 (44%), Gaps = 94/591 (15%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +E+P+ + G L+ A L++ P IA +V+ KID A +IN +L Sbjct: 33 LEQPKSLSMGDLAF-PAFSLAKVFHKAPNQIAADLVS--KIDQTSYEKVEAKGAYINFFL 89 Query: 94 SPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 + ++L++I+ G YG+N GKG V I+ S N P+ +GH R V+G+++A Sbjct: 90 DKGKFSGQVLTTIIEEGSTYGQNDNGKGGNVPIDMSSPNIAKPISMGHLRSTVIGNSIAK 149 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 L+ +GY ++ ++ D G Q L ++ Y++ + N+ D+ + + +V Sbjct: 150 LLVKNGYHPIKDNHLGDWGTQFGKLIVA----YKK--WGNEDDVKKDPINNLVKYYVKFH 203 Query: 213 LADKYSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 DK EL + E K L + + R L++ N +D D G+ Sbjct: 204 KEDKEHPELDDEARETFKKLEDGNEEETELWKWFRRVSLESFNKIYDKLGVTFDTFNGEA 263 Query: 271 ---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP--LL 325 + + I L +G + E S+ Q +D+ +L P +L Sbjct: 264 FYNDKMDEGIQILKDKGLLVE-------SQGAQVVKLDKYKL------------NPALIL 304 Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG+ Y D+A Y Y+ + +YV+GS+ + Y K+L+AV + + A+ N Sbjct: 305 KSDGATLYITRDIATAIYRDRTYKPAMN--LYVVGSEQTYYFKQLKAVLLEMGLQSAE-N 361 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------------------------EV 417 + + +G K+S R+G I L V+D EV Sbjct: 362 LHHIPFGLITVNGK--KLSTRSGRIILLDEVLDDAINLAKKQIEAKNPDLEDKDEVAKEV 419 Query: 418 GSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 G ++ F L KN + DF ++K + + P YVQY++AR SI ++A I Sbjct: 420 GVGAIIFGDL--KNERTNNIDFVLEDQLKFEGETGP--YVQYSHARAESILKKASSI--- 472 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 DF + + D + + + L E+P V+E+A EP ++A Y LA F+ Sbjct: 473 -DFHTTDKELD------DPAAWETVTALNEFPHVVESACKDFEPSEVAKYSLKLAKAFNK 525 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H + V + KL RL LV +V+ ++ LN++GV++P+ M Sbjct: 526 YYAHSK-------VLVEDDKLG-ARLALVKSVSIVLKESLNLLGVKAPDAM 568 >gi|198426883|ref|XP_002129614.1| PREDICTED: similar to arginyl-tRNA synthetase [Ciona intestinalis] Length = 690 Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 146/604 (24%), Positives = 252/604 (41%), Gaps = 109/604 (18%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S L + P IAELI+ + +DS IAG GFIN+ L+ S+ Sbjct: 135 GDYQCNSAMPISGVLKAQGTKMAPRQIAELILKNLPSSDLIDSCNIAGPGFINIRLNVSF 194 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 L++ LS ++V G+ + G+ KV I++ S N MHVGH R ++GD +A+L + Sbjct: 195 LKRALSDVLVHGVRTHHSK-GECGKVVIDYSSPNIAKEMHVGHLRSTIIGDCIANLFEYF 253 Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198 G+EV R ++ D G Q L L F++ + +++D + + Sbjct: 254 GHEVLRVNHVGDWGTQFGMLIAHLTDMFPNYKEESPPIGDLQAFYKQSKKRFDDDPEFKK 313 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y V G + +N W ++ D S + ++I D L +N+ I Sbjct: 314 RAYSCVVKLQSG-------DPDFIN----AW-KLICDVS-RKEFQVIYDRLGIVNL---I 357 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 E +H P +I + +QGYV D ++L+F G Sbjct: 358 ERGESFYHNLMPP----VIAEIEKQGYVVV---------------EDGRKLVFPE---GS 395 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFD----NMIYVMGSDHSGYVKRLEAVAAAV 374 ++KSDG +TY +DLA C +R FD N+IYV + + + K + +VA + Sbjct: 396 QFPLTIVKSDGGFTYDTSDLA---CIKQRIFDESGANLIYVTDAGQAAHFKAIYSVARKM 452 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434 Q+ + + K R+G+ + L ++DE + ++ EL Sbjct: 453 GWYDPQVTRVEHVAFGVVLGEDRKKFKTRSGETVRLAALLDEGRKRCEEKLKEKGRDKEL 512 Query: 435 LDFDFCKVKE----------------------------QSKENPVFYVQYAYARCRSIFR 466 +F +E + + N Y+ YAY R +SI R Sbjct: 513 TPEEFKAAQEAVAYGCIKYADLSHNRINDYVFSFDKMLEDRGNTAAYLLYAYTRIKSIAR 572 Query: 467 QAK---DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 AK + + + + +P E EL+L + +P V++ P+ L Sbjct: 573 VAKVSREELKEAASSFYDDDGLPLEH---AKELKLARFITRFPEVLQRVCDDLAPHTLCD 629 Query: 524 YLYDLASVFHGHW--SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 YLY+LA+V+ + + E R + K+ RL L A ++++ I+G++ Sbjct: 630 YLYELATVYTEFYDVCYCVEKDR---KTGDVVKIHKHRLLLCDATVAVMDQCFKILGIKP 686 Query: 582 PNEM 585 ++M Sbjct: 687 VHKM 690 >gi|55820150|ref|YP_138592.1| arginyl-tRNA synthetase [Streptococcus thermophilus LMG 18311] gi|81561144|sp|Q5M6I4|SYR_STRT2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|55736135|gb|AAV59777.1| arginyl-tRNA synthetase [Streptococcus thermophilus LMG 18311] Length = 563 Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 149/595 (25%), Positives = 255/595 (42%), Gaps = 99/595 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G L+ A L++ L P IA I +I + + V G +IN++ Sbjct: 26 LLEIPKNADMGDLAF-PAFSLAKVLRKAPQMIAADIAEKIDAS-NFEKVEAVGP-YINIF 82 Query: 93 LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + +L ++ G Y IG G + + S N P +GH R V+ D LA Sbjct: 83 LDKSKISADVLGQVIAQGSHYADQNIGNGRNIAFDMSSPNIAKPFSIGHLRSTVIADALA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +++A GY+ R ++ D G Q L ++ W ++A+ N P +Y++ Sbjct: 143 NIVAKQGYKPVRINHLGDWGKQFGMLIVAYKKWGSEEAVKAN----PINELLQLYVRINA 198 Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267 + D E +W ++ D A+ + RD+ L N +D D + Sbjct: 199 EAEEDPSVDE----EAREWFRKLEAGDEEATALWQWFRDESLVEFNRLYDELGVSFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + +++D L ++G + E S+ Q ++++ ++ P Sbjct: 255 GEAFYNDKMDEVVDILTKKGLLQE-------SQGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L KSDG+ Y DLA Y K Y+ F IYV+G++ S + K+L+AV + + Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKAIYVVGNEQSAHFKQLKAVLKEMGYNWS 354 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 ++ + ++G K+S R G+ I L + E Sbjct: 355 D-DMTHVAFGLVTKNGK--KLSTRKGNVILLEPTIAEAVNRAQAQIEAKNPNLPNKEAIA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +++F L DFD V + + P YVQYA+AR +SI R+A D P Sbjct: 412 HAVGVGAIKFYDLKTDRMNGYDFDLDAMVSFEGETGP--YVQYAHARIQSILRKA-DFTP 468 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 D S D ++I L ++PR+I A+ EP +A + LA F+ Sbjct: 469 SAD---------ATYSLNDVESWEIIKLLQDFPRIINRASDNFEPSIVAKFAISLAQAFN 519 Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R E+P RL L +A A+++ L ++GVE+P+EM Sbjct: 520 KYYAHTRILDESPERD-----------SRLALCYATATVLKEALRLLGVEAPDEM 563 >gi|110835103|ref|YP_693962.1| arginyl-tRNA synthetase [Alcanivorax borkumensis SK2] gi|123149267|sp|Q0VMA8|SYR_ALCBS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|110648214|emb|CAL17690.1| arginyl-tRNA synthetase [Alcanivorax borkumensis SK2] Length = 584 Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 140/591 (23%), Positives = 259/591 (43%), Gaps = 76/591 (12%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + I+R RD +HG +TN A++L++P G+ P +AE ++A + D V V IAG GFIN Sbjct: 30 VQIDRTRDKSHGDFATNIALMLAKPAGMKPRDLAEKLIAALPNDSAVAKVDIAGPGFINF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + +L +L S + G + + V +++ S N MHVGH R ++GD + Sbjct: 90 FQADDWLTGLLDSALADDF-LGISRPEQPQTVVVDYSSPNLAKEMHVGHLRSTIIGDAVV 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 + F G+ V R+ ++ D G Q L + + +Q + +L K Sbjct: 149 RTLEFLGHTVIRQNHVGDWGTQFGML---LAYLEEQKTEEGERELSRELANLETFYRAAK 205 Query: 212 ELADKYSSELLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHD---IFISED 263 + D+ S F + +VK DY + + + L +D + ++ Sbjct: 206 QRFDESDS----FADRARALVVKLQSGDDYCLTLWAEFNQVSLSHCQAIYDRLGVSLTPA 261 Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 D H G+ + + ++ +L +G + E S+ Q MD F++ G+ + Sbjct: 262 DVH-GESAYNDDLAQVVADLDSKGLLSE-------SQGAQCVFMD----AFKNKE-GEPL 308 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKR---LEAVAAAVSE 376 + K+DG Y Y +DLA + + D M+Y + + + ++ L +A V E Sbjct: 309 PVIVRKADGGYLYATSDLAALRYRASTLRADRMLYFVDQRQALHFQQMFTLAKLAGFVPE 368 Query: 377 KKAQINVLLCEL----VRLY--RDGMPIKM-------SKRAGDFIT----------LRHV 413 + ++ + R + RDG +K+ +RA + LR++ Sbjct: 369 QTELAHMGFGTMNGPDGRPFKTRDGGTVKLVDLLDEAEQRAFALVQEKNPQLDDEELRNI 428 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +V++ L + S F+F ++ + N Y+ YAY R S+FR+A Sbjct: 429 ARSVGIGAVKYADLSKNRSSDYIFNFEQML-SFEGNTAPYLLYAYTRVASVFRKA----- 482 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 +LD + + E +E L L ++ V++N +P+ L+ YLYD+A +F Sbjct: 483 ELDMANVSGDFLLNED----AEHTLAARLVQFGEVLQNVADKGQPHLLSAYLYDVAGLFS 538 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 + H + + + ++ RL+L A + G+ ++G+ SP E Sbjct: 539 SFYEH------CPILSSEDERIRQSRLKLAALTARTLKHGMELLGL-SPLE 582 >gi|312277462|gb|ADQ62119.1| Arginyl-tRNA synthetase, putative [Streptococcus thermophilus ND03] Length = 563 Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 149/595 (25%), Positives = 254/595 (42%), Gaps = 99/595 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G L+ A L++ L P IA I +I + + V G +IN++ Sbjct: 26 LLETPKNADMGDLAF-PAFSLAKVLRKAPQMIAADIAEKIDAS-NFEKVEAVGP-YINIF 82 Query: 93 LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + +L ++ G Y IG G + + S N P +GH R V+ D LA Sbjct: 83 LDKSKISADVLGQVIAQGSHYADQNIGNGRNIAFDMSSPNIAKPFSIGHLRSTVIADALA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +++A GY+ R ++ D G Q L ++ W ++A+ N P +Y++ Sbjct: 143 NIVAKQGYKPVRINHLGDWGKQFGMLIVAYKKWGSEEAVKAN----PINELLQLYVRINA 198 Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267 + D E +W ++ D A+ + RD+ L N +D D + Sbjct: 199 EAEEDPSVDE----EAREWFRKLEAGDEEATALWQWFRDESLVEFNRLYDELGVSFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + +++D L +G + E S+ Q ++++ ++ P Sbjct: 255 GEAFYNDKMDEVVDILTEKGLLQE-------SQGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L KSDG+ Y DLA Y K Y+ F IYV+G++ S + K+L+AV + + Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKAIYVVGNEQSAHFKQLKAVLKEMGYNWS 354 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 ++ + ++G K+S R G+ I L + E Sbjct: 355 D-DMTHVAFGLVTKNGK--KLSTRKGNVILLEPTIAEAVNRAQAQIEAKNPNLPNKEAIA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +++F L DFD V + + P YVQYA+AR +SI R+A D P Sbjct: 412 HAVGVGAIKFYDLKTDRMNGYDFDLDAMVSFEGETGP--YVQYAHARIQSILRKA-DFTP 468 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 D S D ++I L ++PR+I A+ EP +A + LA F+ Sbjct: 469 SADATY---------SLNDVESWEIIKLLQDFPRIINRASDNFEPSIVAKFAISLAQAFN 519 Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R E+P RL L +A A+++ L ++GVE+P+EM Sbjct: 520 KYYAHTRILDESPERD-----------SRLALCYATATVLKEALRLLGVEAPDEM 563 >gi|320547653|ref|ZP_08041938.1| arginine--tRNA ligase [Streptococcus equinus ATCC 9812] gi|320447728|gb|EFW88486.1| arginine--tRNA ligase [Streptococcus equinus ATCC 9812] Length = 563 Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 153/619 (24%), Positives = 275/619 (44%), Gaps = 104/619 (16%) Query: 8 SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 + R++ + E+D +++I++ ++E P++ G L+ A L+R L P IA Sbjct: 8 AERIQTIVPELD-----QEQIVN--LLEIPKNSDMGDLAF-PAFSLARILRKAPQMIAAD 59 Query: 68 IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIE 126 I K+D A +IN +L + +L ++ +G +Y +G+G V I+ Sbjct: 60 IAE--KLDKTGFEKIEAVGPYINFFLDKKSISADVLGKVIANGSDYASQDLGQGRNVAID 117 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRY 185 S N P +GH R V+GD+LA++ GY+ + ++ D G Q L ++ W Sbjct: 118 MSSPNIAKPFSIGHLRSTVIGDSLANIFEKIGYKAVKINHLGDWGKQFGMLIVAYKKWGD 177 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245 ++A+ + D Y + + K D+ + E E D ++ + Sbjct: 178 EEAVKAHPIDELLKLYVRINAEAETKPELDEEAREWFRKLE------AGDEEAISLWQWF 231 Query: 246 RDD-LKALN-IQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 RD+ L N + +++ +S D F+ G+ + +++D L +G + E S+ Q Sbjct: 232 RDESLVEFNRLYNELGVSFDSFN-GEAFYNDKMDEVVDILTEKGLLEE-------SQGAQ 283 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYV 355 ++++ ++ P L KSDG+ Y DLA Y K Y+ F IYV Sbjct: 284 VVNLEKY-----------GIEHPALIKKSDGATLYITRDLAAALYRKRTYD--FAKAIYV 330 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 +G++ S + K+L+AV + K + ++ + ++G K+S R G+ I L + Sbjct: 331 VGNEQSAHFKQLKAVLNEMDFKWNE-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTIA 387 Query: 416 E-------------------------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKEN 449 E VG +++F L DFD V + + Sbjct: 388 EAVKRAEDQINAKNPNLANKEAVAHAVGVGAIKFYDLKTDRLNGYDFDLDAMVSFEGETG 447 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 P YVQY +AR +SI R+A + P ++ D++ N D ++I + ++PR+I Sbjct: 448 P--YVQYTHARIQSILRKA-EFTPSVN-DVYSLN--------DAESWEIIKLIQDFPRII 495 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAV 566 + A EP +A + LA F+ +++H R ENP RL L +A Sbjct: 496 KRAADNFEPSIIAKFAISLAQSFNKYYAHTRILDENPERD-----------SRLALSYAT 544 Query: 567 ASIINSGLNIIGVESPNEM 585 A+++ L ++GVE+PNEM Sbjct: 545 ATVLKEALRLLGVETPNEM 563 >gi|305663765|ref|YP_003860053.1| arginyl-tRNA synthetase [Ignisphaera aggregans DSM 17230] gi|304378334|gb|ADM28173.1| arginyl-tRNA synthetase [Ignisphaera aggregans DSM 17230] Length = 640 Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 134/574 (23%), Positives = 249/574 (43%), Gaps = 98/574 (17%) Query: 88 FINLYLSPSYLRKILSSIVVSGIE-YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N++L + +++ + +VSG E YG + K +V IE+VSANP P+H+G R AV+ Sbjct: 79 YVNMFLDRTRFTELVFNSIVSGEENYGIFIDDKPRRVVIEYVSANPIHPLHIGAARNAVL 138 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF------------------------ 182 GD LA + +G V +YIND G Q+ LAL + Sbjct: 139 GDFLARIHRKTGNTVQTRFYINDVGRQVALLALGIMKLGSIDIPNDVKPDHWLGTVYAIT 198 Query: 183 ------WRYQQALYNND--------SDLPEGYYPGVYLKHVGKELADKYSSELLNFP--- 225 + ++ L N +L + L+ + E+ DK S EL N Sbjct: 199 NTIAEIYTLKKRLENTGDIERKELVKELDQLLIDASKLREIAPEIFDKISEELKNIDIEQ 258 Query: 226 -----------EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274 E+W+ + +V+ +K ++ L L I+ +I+ E D + Sbjct: 259 EISKIMRSYERGEEWIKNIIRKTVELCIKGFKETLSRLGIEIEIWDWESDLVWS--KEVD 316 Query: 275 DIIDNLAR--QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL---KSDG 329 +ID L + + V++G ++ + ++ R+ + ++++ P L +SDG Sbjct: 317 KLIDELKKRPETIVHKGAYALDFTEILKDTEIRRR------LRIPENLEIPPLIFQRSDG 370 Query: 330 SYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 + Y D+ Y K+ E D +I V+ S+ + ++ + +K N+L Sbjct: 371 TTLYTVRDIVYTLKKFREFNADQVINVIASEQTLPQAQIRLALYLLGYRKEAENLLHYSY 430 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------VGSDSVRFMM 426 + +GM KMS R G ITL +++E +G +++F + Sbjct: 431 EIVNVEGM--KMSSRRGRIITLDSIIEEAKIRALAELEKRGNRSEELAEKIGIAAIKFYL 488 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 L S + F + V + N Y+ Y YAR IFR+A++ +L++ Sbjct: 489 LSVTPSRPVKFAWESVLNFER-NSAPYLLYTYARVEGIFRKAREKGIELNWKELLSQADL 547 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 +E + +LI ++AEYP + + + +P LA Y+ LA F+ + E P Sbjct: 548 GFAENHSRRWRLIKYIAEYPDIFKKTYLELDPSILATYILRLADEFNSWYD---EEP--- 601 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 V + ++ +L LV+++ +++ + L I+G+E Sbjct: 602 IVLEQDPRVRASKLLLVYSIRTVLRNALEILGIE 635 >gi|55822038|ref|YP_140479.1| arginyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066] gi|116627012|ref|YP_819631.1| arginyl-tRNA synthetase [Streptococcus thermophilus LMD-9] gi|81559968|sp|Q5M1Z3|SYR_STRT1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|122268383|sp|Q03MY7|SYR_STRTD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|55738023|gb|AAV61664.1| arginyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066] gi|116100289|gb|ABJ65435.1| arginyl-tRNA synthetase [Streptococcus thermophilus LMD-9] Length = 563 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 149/595 (25%), Positives = 254/595 (42%), Gaps = 99/595 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G L+ A L++ L P IA I +I + + V G +IN++ Sbjct: 26 LLEIPKNADMGDLAF-PAFSLAKVLRKAPQMIAADIAEKIDAS-NFEKVEAVGP-YINIF 82 Query: 93 LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + +L ++ G Y IG G + + S N P +GH R V+ D LA Sbjct: 83 LDKSKISADVLGQVIAQGSHYADQNIGNGRNIAFDMSSPNIAKPFSIGHLRSTVIADALA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +++A GY+ R ++ D G Q L ++ W ++A+ N P +Y++ Sbjct: 143 NIVAKQGYKPVRINHLGDWGKQFGMLIVAYKKWGSEEAVKAN----PINELLQLYVRINA 198 Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267 + D E +W ++ D A+ + RD+ L N +D D + Sbjct: 199 EAEEDPSVDE----EAREWFRKLEAGDEEATALWQWFRDESLVEFNRLYDELGVSFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + +++D L +G + E S+ Q ++++ ++ P Sbjct: 255 GEAFYNDKMDEVVDILTEKGLLQE-------SQGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L KSDG+ Y DLA Y K Y+ F IYV+G++ S + K+L+AV + + Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKAIYVVGNEQSAHFKQLKAVLKEMGYNWS 354 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 ++ + ++G K+S R G+ I L + E Sbjct: 355 D-DMTHVAFGLVTKNGK--KLSTRKGNVILLEPTIAEAVNRAQAQIEAKNPNLPNKEAIA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +++F L DFD V + + P YVQYA+AR +SI R+A D P Sbjct: 412 HAVGVGAIKFYDLKTDRMNGYDFDLDAMVSFEGETGP--YVQYAHARIQSILRKA-DFTP 468 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 D S D ++I L ++PR+I A+ EP +A + LA F+ Sbjct: 469 SAD---------ATYSLNDVESWEIIKLLQDFPRIINRASDNFEPSIVAKFAISLAQAFN 519 Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R E+P RL L +A A+++ L ++GVE+P+EM Sbjct: 520 KYYAHTRILDESPERD-----------SRLALCYATATVLKEALRLLGVEAPDEM 563 >gi|90961654|ref|YP_535570.1| arginyl-tRNA synthetase [Lactobacillus salivarius UCC118] gi|123391360|sp|Q1WU48|SYR_LACS1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|90820848|gb|ABD99487.1| Arginyl-tRNA synthetase [Lactobacillus salivarius UCC118] gi|300214459|gb|ADJ78875.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) (ArgRS) [Lactobacillus salivarius CECT 5713] Length = 563 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 153/590 (25%), Positives = 256/590 (43%), Gaps = 92/590 (15%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 IE+P+ G + A +LS+ L P IA +V +I + V G ++N +L Sbjct: 28 IEKPKTLNLGDYAF-PAFVLSKVLRKAPQMIASELVEKID-QTGFEKVEAVGP-YVNFFL 84 Query: 94 SPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 K ILS ++ G YG +G G V I+ S N PM +GH R V+G++LA Sbjct: 85 DKKEFSKDILSEVLSEGSAYGNQDLGHGGNVPIDMSSPNIAKPMSMGHLRSTVIGNSLAL 144 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 L+ Y+ + ++ D G Q L ++ W ++ + + + YY + + V Sbjct: 145 LLEKVNYKPIKIDHLGDWGTQFGKLIVAYKLWGSEEEVKADPINNLLKYYVRFHEEDVNN 204 Query: 212 ELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 D+ + E L +E+ L + K + +++ K + LNI D + E ++ Sbjct: 205 PELDEEAREWFKKLEDGDEEALKLWKWFREESLKKFT-EVYDRLNITFDSYNGEAFYN-- 261 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--K 326 + +I D L +G + E S+ + D+++ L P L K Sbjct: 262 --DKMDEITDLLQEKGLLKE-------SQGAEIVDLEKYDL------------NPALIRK 300 Query: 327 SDGSYTYFAADLAYFKCKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAVS-EKKAQINV 383 +DG+ Y DLA +Y R +D +YV+G + + + K+L+AV + + I+ Sbjct: 301 TDGATLYITRDLAAALYRY-RTYDFVQSLYVVGQEQTNHFKQLKAVLKEMGYDWSDDIHH 359 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------VG 418 + L+ K+S R+G I L V+D+ VG Sbjct: 360 IPFGLIT----SGGKKLSTRSGRVILLEEVLDDAVKLANKQIEEKNPNLADKEEVAEAVG 415 Query: 419 SDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 +V F L KN + FDF V+ + + P YVQY++AR SI R+A D+ +L Sbjct: 416 VGAVVFHDL--KNERINSFDFNLDEVVRFEGETGP--YVQYSHARAMSILRKAGDL--EL 469 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 D D + D Q + LA +P ++ A EP +A Y LA F+ + Sbjct: 470 DSDNLEIS--------DPEAWQTLRLLAAFPETVKKAVSEYEPSVVAKYAIHLAKAFNKY 521 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++H R N+ RL LV +VA+ + L ++GV++PNEM Sbjct: 522 YAHSR--------ILNDDAEKNARLALVQSVATTLKESLRLLGVKAPNEM 563 >gi|85059226|ref|YP_454928.1| arginyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans'] gi|109895037|sp|Q2NTK2|SYR_SODGM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|84779746|dbj|BAE74523.1| arginyl-tRNA synthase [Sodalis glossinidius str. 'morsitans'] Length = 576 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 152/605 (25%), Positives = 247/605 (40%), Gaps = 127/605 (20%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LGL P +AE +V + +D V IAG GFIN++L PS+L L Sbjct: 37 GDYQANGVMAIAKQLGLPPRKLAENVVGLLNLDGIARKVDIAGPGFINIFLEPSWLANHL 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 ++ +S G + T V +++ + N MHVGH R ++GD ++F G+ V Sbjct: 97 AA-ALSSPRLGIASVASQTIV-VDYSAPNVAKEMHVGHVRSTIIGDASVRTLSFLGHNVI 154 Query: 163 REYYINDAGAQINTL------------------ALSVFWRYQQALYNNDSDLPEGYYPGV 204 R ++ D G Q L +L F+R + Y+ D E G Sbjct: 155 RANHVGDWGTQFGMLIAYLEKVQDGGEAEMQLSSLESFYRAAKQHYDEDPAFAE-RARGY 213 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNIQHD 257 +K G D+Y ++ W +V Q + + R D+ ++ +D Sbjct: 214 VVKLQG---GDEYCRQM-------WRKLVDVTMAQNQKTYNRLNVTLTRADVMGESLYND 263 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 + + I+ +L +G E S+ +D F++ G Sbjct: 264 M--------------LPGIVADLKAKGLAVE-------SEGATVVFLDE----FKNKE-G 297 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEA 369 + + + K DG+Y Y D+A K +YE D +IY + S + V++ Sbjct: 298 EPMGVIIQKKDGAYLYTTTDIACAKYRYETLKADRIIYYIDSRQHQHLMLAWTIVRKAGY 357 Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------- 416 V +V + ++L +DG P K RAG I L ++DE Sbjct: 358 VPESVPLEHHMFGMMLG------KDGKPFK--TRAGGTIKLTELLDEALERARRLVAAKN 409 Query: 417 --------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462 VG +V++ L + + FD+ + + N Y+QYAY R Sbjct: 410 PSMDAGELARLAQVVGIGAVKYADLSKSRTTDYVFDWDNMLS-FEGNTAPYMQYAYTRVA 468 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE--PYK 520 SIF+++ L D I E+E +T QL V L + I AT+A++ P+ Sbjct: 469 SIFKRSGQDEQQLTGD------IRLEAEQET---QLAVRLLQLEEAI--ATVARDGTPHV 517 Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 L YLYDLA +F + H + A N L RLQL A + GL+++G+E Sbjct: 518 LCAYLYDLAVLFSAFYEH------CPILNAENAALRQSRLQLALLTARTLKKGLDLLGIE 571 Query: 581 SPNEM 585 + M Sbjct: 572 TVERM 576 >gi|227890742|ref|ZP_04008547.1| arginyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741] gi|227867680|gb|EEJ75101.1| arginyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741] Length = 575 Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 153/590 (25%), Positives = 256/590 (43%), Gaps = 92/590 (15%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 IE+P+ G + A +LS+ L P IA +V +I + V G ++N +L Sbjct: 40 IEKPKTLNLGDYAF-PAFVLSKVLRKAPQMIASELVEKID-QTGFEKVEAVGP-YVNFFL 96 Query: 94 SPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 K ILS ++ G YG +G G V I+ S N PM +GH R V+G++LA Sbjct: 97 DKKEFSKDILSEVLSEGSAYGNQDLGHGGNVPIDMSSPNIAKPMSMGHLRSTVIGNSLAL 156 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 L+ Y+ + ++ D G Q L ++ W ++ + + + YY + + V Sbjct: 157 LLEKVNYKPIKIDHLGDWGTQFGKLIVAYKLWGSEEEVKADPINNLLKYYVRFHEEDVNN 216 Query: 212 ELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 D+ + E L +E+ L + K + +++ K + LNI D + E ++ Sbjct: 217 PELDEEAREWFKKLEDGDEEALKLWKWFREESLKKFT-EVYDRLNITFDSYNGEAFYN-- 273 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--K 326 + +I D L +G + E S+ + D+++ L P L K Sbjct: 274 --DKMDEITDLLQEKGLLKE-------SQGAEIVDLEKYDL------------NPALIRK 312 Query: 327 SDGSYTYFAADLAYFKCKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAVS-EKKAQINV 383 +DG+ Y DLA +Y R +D +YV+G + + + K+L+AV + + I+ Sbjct: 313 TDGATLYITRDLAAALYRY-RTYDFVQSLYVVGQEQTNHFKQLKAVLKEMGYDWSDDIHH 371 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------VG 418 + L+ K+S R+G I L V+D+ VG Sbjct: 372 IPFGLIT----SGGKKLSTRSGRVILLEEVLDDAVKLANKQIEEKNPNLADKEEVAEAVG 427 Query: 419 SDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 +V F L KN + FDF V+ + + P YVQY++AR SI R+A D+ +L Sbjct: 428 VGAVVFHDL--KNERINSFDFNLDEVVRFEGETGP--YVQYSHARAMSILRKAGDL--EL 481 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 D D + D Q + LA +P ++ A EP +A Y LA F+ + Sbjct: 482 DSDNLEIS--------DPEAWQTLRLLAAFPETVKKAVSEYEPSVVAKYAIHLAKAFNKY 533 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++H R N+ RL LV +VA+ + L ++GV++PNEM Sbjct: 534 YAHSR--------ILNDDAEKNARLTLVQSVATTLKESLRLLGVKAPNEM 575 >gi|317491773|ref|ZP_07950208.1| arginyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920207|gb|EFV41531.1| arginyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 576 Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 141/577 (24%), Positives = 248/577 (42%), Gaps = 71/577 (12%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LG+ P +AE ++ +++D +V IAG GFIN++L P++L K + Sbjct: 37 GDYQANGVMGAAKKLGIAPRQLAEQVLTHLELDGIASNVEIAGPGFINIFLDPAWLAKQV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + ++ G + T V +++ + N MHVGH R ++GD + F G+ V Sbjct: 97 -EMALADERLGVAAVKPQTIV-VDYSAPNVAKEMHVGHLRSTIIGDASVRTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220 R ++ D G Q L + Q + N+ DL E +Y A K+ E Sbjct: 155 RANHVGDWGTQFGMLI--AYLEKMQNEHANEMDLSDLEAFY----------REAKKHYDE 202 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED--DFHRGDPSPIRDIID 278 F E +VK +Q + R+ + L DI +S++ ++ R + + +D + Sbjct: 203 DAEFAERARAYVVK---LQGGDEYCREMWRKLV---DITMSQNQKNYQRLNVTLTKDDVM 256 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF---RSTMVGDDVDRPLLKSDGSYTYFA 335 + + GI+ K+K + + ++F G+ + + K DG Y Y Sbjct: 257 GESLYNSMLPGIVADLKAKGL-AVESEGATVVFLDEYKNKEGEPMGVIIQKKDGGYLYTT 315 Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387 D+A K +YE G D ++Y + S + V++ V +VS + ++L + Sbjct: 316 TDIACAKYRYETLGADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVSLEHHMFGMMLGK 375 Query: 388 LVRLY--RDGMPIKMS-------KRAGDFIT----------LRHVVDEVGSDSVRFMMLW 428 + + R G IK+S +RAG I L +V+ VG +V++ L Sbjct: 376 DGKPFKTRSGGTIKLSDLLDEAVERAGKLIAEKNPDLSGDELAKLVEVVGIGAVKYADLS 435 Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488 + + FD+ + + N Y+QYAY R SIF++A +D N++ E Sbjct: 436 KSRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVSSIFKRA-----GIDEQSLSGNIVLTE 489 Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548 E L L ++ I P+ + YLYDLA +F + + Sbjct: 490 DR----EKALAARLIQFEETITQVAREGTPHVMCTYLYDLAGLFSSFYE------ACPIL 539 Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A + + RLQL A + +GL+ +G+E+ M Sbjct: 540 TAESEEQRNSRLQLAALTARTLKTGLDTLGIETVERM 576 >gi|164687639|ref|ZP_02211667.1| hypothetical protein CLOBAR_01281 [Clostridium bartlettii DSM 16795] gi|164603413|gb|EDQ96878.1| hypothetical protein CLOBAR_01281 [Clostridium bartlettii DSM 16795] Length = 566 Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 158/625 (25%), Positives = 268/625 (42%), Gaps = 106/625 (16%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIV--IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 DF + N LKE K+E L+ IV IE P + G + L++ P Sbjct: 3 DFKIAIANCLKE-----KIEDLTLEEIVALIEVPPNKEMGDFAF-PCFKLAKVFRKAPNM 56 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTK 122 IA + I+ + V G G++N +++ S L + +++ ++ +YG +G+ Sbjct: 57 IAADLAENIEAKGAISKVMPLG-GYVNFFVNKSQLAETVINDVLTKKEKYGHTDLGQDKA 115 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV- 181 V I+F S N P H+GH R V+G+ L + GY V R ++ D G Q L ++ Sbjct: 116 VVIDFSSPNIAKPFHIGHIRTTVIGNALYKIYDSQGYNVVRVNHLGDYGTQFGKLIVAFK 175 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE-----EKWLPIVK-- 234 W ++A+ N +PE LK L K+ E PE W ++ Sbjct: 176 LWGSKEAVEAN--PIPE------LLK-----LYVKFHEEAEQKPEMEDEARAWFTKLENG 222 Query: 235 DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEGI 290 D +A+ + RD+ LK +D+ E D + G+ + +ID L +G + + Sbjct: 223 DEEAKALWQWFRDESLKEFARVYDLLDIEFDSYAGESFYSDKMGVVIDQLKEKGLLVQ-- 280 Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKY 345 S+ T D+++ + P L K+DGS Y DLA Y K Y Sbjct: 281 -----SQGTNVVDLEQYNM------------PPALITKNDGSTLYMTRDLAAAIYRKNTY 323 Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAV-----------------------AAAVSEKKAQIN 382 + FD IYV+GS S + ++L V +S +K ++ Sbjct: 324 D--FDKCIYVVGSQQSLHFQQLFKVLELMGYEWSKDLIHVPFGMVALEEGTMSTRKGRVV 381 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 L L + I +SK + + + +VG +V F L NS + D+ F Sbjct: 382 FLEDVLKQAVEKTKEIVLSKNP-NAKNVEQIAKQVGVGAVVFQEL--SNSRIKDYTFSWS 438 Query: 443 KEQSKENPVF-YVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500 + S E YVQY +ARC ++ R+A +++ D+++DL SE D +E+ ++ Sbjct: 439 RTLSFEGETGPYVQYTHARCCAVLRKAEEEVTADINYDLL--------SEGDGAEVLKVI 490 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 + + I A EP+ + ++ DLA F+ + +NP L ++ ++ RL Sbjct: 491 --GSFNKAILAAMRKNEPHIITRFVLDLAQAFNKFY---HDNPIL----VDDVEVRKARL 541 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 LV A I + L ++G+ +P M Sbjct: 542 ALVAATRQTIENALALLGMHAPERM 566 >gi|50302751|ref|XP_451312.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49640443|emb|CAH02900.1| KLLA0A07040p [Kluyveromyces lactis] Length = 649 Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 149/581 (25%), Positives = 251/581 (43%), Gaps = 96/581 (16%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIE 111 L R G++P IAE + ++ V G F+ + P +L KI L I+ + Sbjct: 117 LVRKKGINPKEIAEEWATKFPCGDYLEKVEANGP-FVQFFFKPEFLFKIVLPDILTRKEK 175 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG + +G K+ IEF S N P H GH R ++G L++L G++VTR Y+ D G Sbjct: 176 YGSSPLGGNKKILIEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEQLGWDVTRINYLGDWG 235 Query: 172 AQINTLALSVFWRY--QQALYNNDSDLPEGYYPGVYLK------HVGKELADKYSSE--- 220 Q LA+ F RY ++AL N+ P + VY++ + G L+++ S++ Sbjct: 236 KQFGVLAVG-FERYGDEEALRND----PINHLFEVYVRINKDIENEGDTLSEEESTDGKA 290 Query: 221 -----LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275 + + + L I K + ++ K I+ + LNI++D++ G+ ++ Sbjct: 291 RSYFKKMEDGDPEALKIWKRFRELSIEKYIKTYAR-LNIKYDVY-------SGESQVSKE 342 Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYF 334 +D R ++E K+ T + DR L T + + ++ KSDG+ Y Sbjct: 343 QMDKAMR---MFED-----KNLTHE----DRGATLIDLTKFNKKLGKTIVQKSDGTTLYL 390 Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYV---------------KRLEAV----AAAV 374 D+ +YE+ FD MIYV+ +V RL+ V + Sbjct: 391 TRDVGAAMDRYEKYHFDQMIYVIACQQDLHVAQFFEILKQLGFEWANRLQHVNFGMVQGM 450 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRKN 431 S +K + V L ++ ++ M M K + + + V D VG +V + K Sbjct: 451 STRKGTV-VFLDNILEETKEKMHEVMRKNETKYAQIENPDEVADLVGISAVMIQDMQAKR 509 Query: 432 SELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPD----LDFDLF--PRNV 484 +F + ++ + P Y+QYA++R RS+ R A DI PD DF L P V Sbjct: 510 INNYEFKWERMTSFEGDTGP--YLQYAHSRLRSVERNASDITPDQWVSADFSLLHEPAAV 567 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 I L+ LA+YP V+ NA EP + YL+ L + Sbjct: 568 I------------LVRLLAQYPDVLRNAIKTHEPSTVVTYLFKLTHQVSSCYD------- 608 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +V +L RL L A ++N+G+ ++G+ + M Sbjct: 609 VLWVAGQTPELAAARLALYGAARQVLNNGMRLLGLTPVDRM 649 >gi|15802288|ref|NP_288313.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 EDL933] gi|12515938|gb|AAG56866.1|AE005410_2 arginine tRNA synthetase [Escherichia coli O157:H7 str. EDL933] Length = 577 Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 150/587 (25%), Positives = 249/587 (42%), Gaps = 90/587 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G K T V +++ + N MHVGH R ++GD + F G++V Sbjct: 97 QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGK-----EL 213 R ++ D G Q L + W +Q N +DL EG+Y KH + E Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRDAK-KHYDEDEEFAER 209 Query: 214 ADKYSSELLNFPE---EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 A Y +L + E E W +V Q +I D L + + HD + E ++ P Sbjct: 210 ARNYVVKLQSGDEYFREMWRKLVDITMTQN--QITYDRLN-VTLTHDDVMGESLYNPMLP 266 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I+ +L +G E S+ +D F++ G+ + + K DG Sbjct: 267 G----IVADLKAKGLAVE-------SEGATVVFLDE----FKNKE-GEPMGVIIXKKDGG 310 Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLC 386 Y Y D+A K +YE D ++Y + S ++ + A+ A V E + + Sbjct: 311 YLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFG 370 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGS 419 + L +DG P K RAG + L ++DE VG Sbjct: 371 MM--LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGI 426 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD- 478 +V++ L + + FD+ + + N Y+QYAY R S+FR+A ++D + Sbjct: 427 GAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EIDEEQ 480 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 481 LAAAPVIIREDR----EAQLAARLLQFEXTLTVVAREGTPHVMCAYLYDLAGLFSGFYEH 536 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 ------CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|74311774|ref|YP_310193.1| arginyl-tRNA synthetase [Shigella sonnei Ss046] gi|109895036|sp|Q3Z2Q4|SYR_SHISS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|73855251|gb|AAZ87958.1| arginine tRNA synthetase [Shigella sonnei Ss046] gi|323165334|gb|EFZ51122.1| arginyl-tRNA synthetase [Shigella sonnei 53G] Length = 578 Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 142/579 (24%), Positives = 247/579 (42%), Gaps = 73/579 (12%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMTPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G + K T V +++ + N MHVGH R ++GD + F G++V Sbjct: 97 QQALASD-RLGVSTPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222 R ++ D G Q L + W +Q N ++ G Y A K+ E Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGDEMELADLEGFYRD------AKKHYDEDE 205 Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIIDNL 280 F E +VK +Q+ + R+ + L DI ++++ + R + + RD + Sbjct: 206 EFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDDVMGE 259 Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAAD 337 + + GI+ K+K + + ++F G+ + + K DG Y Y D Sbjct: 260 SLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTD 318 Query: 338 LAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYR 393 +A K +YE D ++Y + S ++ + A+ A V E + + + L + Sbjct: 319 IACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM--LGK 376 Query: 394 DGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMM 426 DG P K RAG + L ++DE VG +V++ Sbjct: 377 DGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAVKYAD 434 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 L + + FD+ + + N Y+QYAY R S+FR+A +I + L VI Sbjct: 435 LSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLAAAPVII 489 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 490 REDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH------CP 539 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 540 ILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 578 >gi|15831840|ref|NP_310613.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai] gi|168747906|ref|ZP_02772928.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113] gi|168757913|ref|ZP_02782920.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401] gi|168770862|ref|ZP_02795869.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486] gi|168776574|ref|ZP_02801581.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196] gi|168783179|ref|ZP_02808186.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076] gi|168789744|ref|ZP_02814751.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869] gi|168801885|ref|ZP_02826892.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508] gi|195939580|ref|ZP_03084962.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024] gi|208810380|ref|ZP_03252256.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206] gi|208816722|ref|ZP_03257842.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045] gi|208818546|ref|ZP_03258866.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042] gi|209395919|ref|YP_002270960.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115] gi|254793500|ref|YP_003078337.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359] gi|261227623|ref|ZP_05941904.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000] gi|261258211|ref|ZP_05950744.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966] gi|21542249|sp|Q8XCH2|SYR_ECO57 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|238065087|sp|B5YR22|SYR_ECO5E RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|13362054|dbj|BAB36009.1| arginine tRNA synthetase [Escherichia coli O157:H7 str. Sakai] gi|187768070|gb|EDU31914.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196] gi|188017552|gb|EDU55674.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113] gi|188999443|gb|EDU68429.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076] gi|189355181|gb|EDU73600.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401] gi|189360270|gb|EDU78689.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486] gi|189370702|gb|EDU89118.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869] gi|189376028|gb|EDU94444.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508] gi|208724896|gb|EDZ74603.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206] gi|208731065|gb|EDZ79754.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045] gi|208738669|gb|EDZ86351.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042] gi|209157319|gb|ACI34752.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115] gi|209767330|gb|ACI81977.1| arginine tRNA synthetase [Escherichia coli] gi|209767332|gb|ACI81978.1| arginine tRNA synthetase [Escherichia coli] gi|209767336|gb|ACI81980.1| arginine tRNA synthetase [Escherichia coli] gi|254592900|gb|ACT72261.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359] gi|320188575|gb|EFW63237.1| Arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212] gi|320641730|gb|EFX11118.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101] gi|326342254|gb|EGD66035.1| Arginyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044] gi|326343804|gb|EGD67566.1| Arginyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125] Length = 577 Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 150/587 (25%), Positives = 249/587 (42%), Gaps = 90/587 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G K T V +++ + N MHVGH R ++GD + F G++V Sbjct: 97 QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGK-----EL 213 R ++ D G Q L + W +Q N +DL EG+Y KH + E Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRDAK-KHYDEDEEFAER 209 Query: 214 ADKYSSELLNFPE---EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 A Y +L + E E W +V Q +I D L + + HD + E ++ P Sbjct: 210 ARNYVVKLQSGDEYFREMWRKLVDITMTQN--QITYDRLN-VTLTHDDVMGESLYNPMLP 266 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I+ +L +G E S+ +D F++ G+ + + K DG Sbjct: 267 G----IVADLKAKGLAVE-------SEGATVVFLDE----FKNKE-GEPMGVIIQKKDGG 310 Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLC 386 Y Y D+A K +YE D ++Y + S ++ + A+ A V E + + Sbjct: 311 YLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFG 370 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGS 419 + L +DG P K RAG + L ++DE VG Sbjct: 371 MM--LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGI 426 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD- 478 +V++ L + + FD+ + + N Y+QYAY R S+FR+A ++D + Sbjct: 427 GAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EIDEEQ 480 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 481 LAAAPVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH 536 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 ------CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|227524707|ref|ZP_03954756.1| arginyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290] gi|227088191|gb|EEI23503.1| arginyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290] Length = 568 Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 151/591 (25%), Positives = 262/591 (44%), Gaps = 94/591 (15%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 + +P+ + G L+ A L++ P IA +V+ KID A +IN +L Sbjct: 33 LAQPKSLSMGDLAF-PAFSLAKVFHKAPNQIAADLVS--KIDQTSYEKVEAKGAYINFFL 89 Query: 94 SPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 + ++L++I+ G YG+N GKG V I+ S N P+ +GH R V+G+++A Sbjct: 90 DKGKFSGQVLTTIIEEGSTYGQNDNGKGGNVPIDMSSPNIAKPISMGHLRSTVIGNSIAK 149 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 L+ +GY ++ ++ D G Q L ++ Y++ + N+ D+ + +V Sbjct: 150 LLVKNGYHPIKDNHLGDWGTQFGKLIVA----YKK--WGNEDDVKRDPINNLVKYYVKFH 203 Query: 213 LADKYSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 DK EL + E K L + + R L++ N +D D G+ Sbjct: 204 KEDKEHPELDDEARETFKKLEDGNEEETELWKWFRRVSLESFNKIYDKLGVTFDTFNGEA 263 Query: 271 ---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP--LL 325 + + I L +G + E S+ Q +D+ +L P +L Sbjct: 264 FYNDKMDEGIQILKDKGLLVE-------SQGAQVVKLDKYKL------------NPALIL 304 Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG+ Y D+A Y Y+ + +YV+GS+ + Y K+L+AV + + A+ N Sbjct: 305 KSDGATLYITRDIATAIYRDRTYKPAMN--LYVVGSEQTYYFKQLKAVLLEMGLQSAE-N 361 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------------------------EV 417 + + +G K+S R+G I L V+D EV Sbjct: 362 LHHIPFGLITVNGK--KLSTRSGRIILLDEVLDDAINLAKKQIEAKNPDLEDKDEVAKEV 419 Query: 418 GSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 G ++ F L KN + DF ++K + + P YVQY++AR SI ++A I Sbjct: 420 GVGAIIFGDL--KNERTNNIDFVLEDQLKFEGETGP--YVQYSHARAESILKKASSI--- 472 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 DF + + D + + + L E+P V+E+A EP ++A Y LA F+ Sbjct: 473 -DFHTTDKELD------DPAAWETVTALNEFPHVVESACKDFEPSEVAKYSLKLAKAFNK 525 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H + V + KL RL LV +V+ ++ LN++GV++P+ M Sbjct: 526 YYAHSK-------VLVEDDKLG-ARLALVKSVSIVLKESLNLLGVKAPDAM 568 >gi|18314006|ref|NP_560673.1| arginyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2] gi|23822198|sp|Q8ZTA8|SYR_PYRAE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|18161582|gb|AAL64855.1| arginyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2] Length = 630 Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 141/572 (24%), Positives = 251/572 (43%), Gaps = 119/572 (20%) Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + ++V G +YG +E SANP P+H+GH R A++GD+LA L+ F G + Sbjct: 91 VFEAVVKMGRKYGFTEECVTGSYLVEHTSANPVHPLHIGHGRNAILGDSLARLLKFCGNK 150 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV----------- 209 V +Y++D G Q+ A+ A+ + E P V + HV Sbjct: 151 VETHFYVDDCGVQVMYAAMGY-----NAVKDEVKKRIEKSKPDVVIGHVYSATNAVAEIG 205 Query: 210 --GKELA----DKYSSELLNFPEEKWLPIVKDY--SVQAMMKIIRDDLKALNIQHDIFIS 261 KEL D+ E+L +E W+ ++K S ++ I ++L ++ ++ Sbjct: 206 RLKKELEKAQDDERKREILREIDE-WVAVLKRLMDSEGDIISKIAEELGRRDLLNEAVEL 264 Query: 262 EDDFHRGDPSP---IRDIID--------NLARQG-----YVYEG-----------ILPPP 294 + GDP +R+++D LAR G + YE I+ Sbjct: 265 NRRYESGDPEAKGVVREVVDLVLKGQRETLARLGVEIDKWDYESELTVWSSEAMRIVSEL 324 Query: 295 KSKTTQKCDMDRKQLLFRSTM------VGDDVDRP-------LLKSDGSYTYFAADLAYF 341 + + Q ++ ++FR+ + D +D P L +SDG+ Y D+AY Sbjct: 325 QKRWPQYIEIKGGAVVFRADKFVQDYNLWDVLDLPRFIPPVTLTRSDGTTLYVTRDVAYA 384 Query: 342 KCKYERGFDNMIYVMGSDHS---GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 + +GFD +I V+ ++ + +V+ + V E K ++ E+V L GM Sbjct: 385 LWQARQGFDKVIRVISTEQTHEQAHVRIILYALGYVDEAKKIVH-YAYEMVNL--PGM-- 439 Query: 399 KMSKRAGDFITLRHVVDE-----------------------VGSDSVRFMMLWRKNSELL 435 KMS R G +I+L ++DE VG SVR+ L + + Sbjct: 440 KMSARRGQYISLDEILDEAAERSASLVKEKNPEVSGVIAERVGVGSVRYAFLTTSPRKPI 499 Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI--FPDLDFDLFPRNVIPQESEFDT 493 +F + V ++N ++QY Y R SI +A +I P P N++ +E E Sbjct: 500 EFKW-DVVLNLRQNSGTFLQYTYVRAYSILEKAGEIGNVP------VPENMLAEERE--- 549 Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553 L++ +AE+P V++ A + P +A YL LA VF+ ++ P L+ ++ Sbjct: 550 ----LVLKIAEWPSVVKEAAKSLRPDYVAEYLDGLALVFNSYYEKA---PVLKAEES--- 599 Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R+ +V+AV +++ +G I+G+ + +M Sbjct: 600 -VRGFRIAIVNAVKTVLEAGFYILGIPTLTKM 630 >gi|24380431|ref|NP_722386.1| arginyl-tRNA synthetase [Streptococcus mutans UA159] gi|38372521|sp|Q8DRW2|SYR_STRMU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|24378457|gb|AAN59692.1|AE015031_8 putative arginyl-tRNA synthase [Streptococcus mutans UA159] Length = 563 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 147/601 (24%), Positives = 262/601 (43%), Gaps = 111/601 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E+P+ + G L+ L++ + P IA +V +I + + V G +IN + Sbjct: 26 LLEKPKKSSMGDLAF-PTFSLAKTMRKAPQIIASELVGQIN-NSYFEKVEAVGP-YINFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+ S + ++L ++ +Y + IG+G + I+ S N P +GH R V+GD L+ Sbjct: 83 LNKSEISAQVLKEVIKKREDYAQAAIGQGHNIVIDLSSPNIAKPFSIGHLRSTVIGDALS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GYE + ++ D G Q L ++ W ++A+ + P +Y+ Sbjct: 143 NIFQKLGYETVKINHLGDWGKQFGMLIVAYKKWGSEEAVRAH----PIDELLKIYV---- 194 Query: 211 KELADKYSSELLNFPE-----EKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISE 262 + ++E N PE +W ++ D A+ + RD+ L N + + Sbjct: 195 -----RINAETKNHPELDEEAREWFRKLENNDEEALALWQWFRDESLMEFNRLYAELGID 249 Query: 263 DDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319 D + G+ + +++ LA +G + E SK Q ++++ Sbjct: 250 FDSYNGEAFYNDKMEEVVQLLAEKGLLEE-------SKGAQVVNLEKY-----------G 291 Query: 320 VDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374 ++ P L KSDG+ Y DLA Y K Y+ F IYV+G + + + K+L+AV A + Sbjct: 292 IEHPALIKKSDGATLYITRDLAAAIYRKRTYD--FAKAIYVVGQEQTAHFKQLKAVLAEM 349 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 ++ ++ + ++G K+S R G+ I L + E Sbjct: 350 GYAWSK-DIQHVSFGLVTKNGQ--KLSTRKGNVILLEPTIAEAVKRSLAQIDTKNPDLVN 406 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG +++F L + DFD V + + P YVQYA+AR +SI R+A Sbjct: 407 KEAVAHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKA 464 Query: 469 KDIFPDLDFDLFPRNVIPQESE----FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 DF PQ +E DT ++I + ++P I A EP +A + Sbjct: 465 -------DFQ-------PQATENYQLNDTESWEIIKLIQDFPNTIVRAADNFEPSLIARF 510 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 LA F+ +++H R +N RL L +A A+++ L ++GVE+PNE Sbjct: 511 AIHLAQSFNKYYAHTR--------ILDNSPERDSRLALSYATATVLKEALALLGVEAPNE 562 Query: 585 M 585 M Sbjct: 563 M 563 >gi|91211101|ref|YP_541087.1| arginyl-tRNA synthetase [Escherichia coli UTI89] gi|117624028|ref|YP_852941.1| arginyl-tRNA synthetase [Escherichia coli APEC O1] gi|218558741|ref|YP_002391654.1| arginyl-tRNA synthetase [Escherichia coli S88] gi|237705832|ref|ZP_04536313.1| arginyl-tRNA synthetase [Escherichia sp. 3_2_53FAA] gi|123084447|sp|Q1RAQ8|SYR_ECOUT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|166232784|sp|A1AC37|SYR_ECOK1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|226701376|sp|B7MBT5|SYR_ECO45 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|91072675|gb|ABE07556.1| arginine tRNA synthetase [Escherichia coli UTI89] gi|115513152|gb|ABJ01227.1| arginyl-tRNA synthetase [Escherichia coli APEC O1] gi|218365510|emb|CAR03237.1| arginyl-tRNA synthetase [Escherichia coli S88] gi|226900589|gb|EEH86848.1| arginyl-tRNA synthetase [Escherichia sp. 3_2_53FAA] gi|294493402|gb|ADE92158.1| arginyl-tRNA synthetase [Escherichia coli IHE3034] gi|307626641|gb|ADN70945.1| arginyl-tRNA synthetase [Escherichia coli UM146] gi|323952379|gb|EGB48252.1| arginyl-tRNA synthetase [Escherichia coli H252] gi|323956508|gb|EGB52250.1| arginyl-tRNA synthetase [Escherichia coli H263] Length = 577 Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 145/584 (24%), Positives = 252/584 (43%), Gaps = 84/584 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G+ N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GNYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G + K T V +++ + N MHVGH R ++GD + F G++V Sbjct: 97 QQALASD-RLGVAMPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + W +Q N +DL EG+Y A K+ Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276 E F E +VK +Q+ + R+ + L DI ++++ + R + + RD Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333 + + + GI+ K+K + + ++F G+ + + K DG Y Y Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389 D+A K +YE D ++Y + S ++ + A+ A V E + + + Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422 L +DG P K RAG + L ++DE VG +V Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-LFP 481 ++ L + + FD+ + + N Y+QYAY R S+FR+A ++D + L Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EIDEEQLAA 483 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 484 APVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH--- 536 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 ---CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|146312088|ref|YP_001177162.1| arginyl-tRNA synthetase [Enterobacter sp. 638] gi|166987303|sp|A4WBN1|SYR_ENT38 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|145318964|gb|ABP61111.1| arginyl-tRNA synthetase [Enterobacter sp. 638] Length = 577 Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 138/585 (23%), Positives = 248/585 (42%), Gaps = 86/585 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AEL++ + ++ + V IAG GFIN++L P++ L Sbjct: 37 GDYQANGVMAVAKKLGMPPRQLAELVLTHLDLNGIANKVEIAGPGFINIFLDPAF----L 92 Query: 103 SSIVVSGIEYGRNLIG--KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 +S V + ++ R + K + +++ + N MHVGH R ++GD + F G++ Sbjct: 93 ASHVDAALKSERLGVAQPKAETIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHK 152 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 V R ++ D G Q L ++ + QQ N ++ G Y + A K+ E Sbjct: 153 VIRANHVGDWGTQFGML-IAFLEKQQQ---ENAGEMALADLEGFYRE------AKKHYDE 202 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278 F E +VK +Q + R+ + L DI +S++ ++R + + RD + Sbjct: 203 DAAFAERARSYVVK---LQGGDEYFREMWRKLV---DITMSQNQLAYNRLNVTLTRDDVM 256 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF---RSTMVGDDVDRPLLKSDGSYTYFA 335 + + GI+ K+K + + ++F G+ + + K DG Y Y Sbjct: 257 GESLYNPMLPGIVADLKAKKL-AVESEGATVVFLDEYKNKEGEPMGVIIQKKDGGYLYTT 315 Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387 D+A K +YE D ++Y + S + V++ V +V + ++L Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFGMMLG- 374 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420 +DG P K RAG + L ++DE VG Sbjct: 375 -----KDGKPFKT--RAGGTVKLSDLLDEALERARRLVAEKNPDMPAEELEKLANAVGIG 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +V++ L + + FD+ + + N Y+QYAY R S+FR+A ++D Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----NIDESAL 481 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 + + E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 482 ANAAVVITED---REAQLAARLLQFEETLTVVAREGTPHVMCSYLYDLAGLFSGFYEH-- 536 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A+N + RL+L A + GL+ +G+E+ M Sbjct: 537 ----CPILSADNEEARNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|168762327|ref|ZP_02787334.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501] gi|217328684|ref|ZP_03444765.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588] gi|189367334|gb|EDU85750.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501] gi|217318031|gb|EEC26458.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588] Length = 577 Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 150/587 (25%), Positives = 249/587 (42%), Gaps = 90/587 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G K T V +++ + N MHVGH R ++GD + F G++V Sbjct: 97 QQALASD-HLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGK-----EL 213 R ++ D G Q L + W +Q N +DL EG+Y KH + E Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRDAK-KHYDEDEEFAER 209 Query: 214 ADKYSSELLNFPE---EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 A Y +L + E E W +V Q +I D L + + HD + E ++ P Sbjct: 210 ARNYVVKLQSGDEYFREMWRKLVDITMTQN--QITYDRLN-VTLTHDDVMGESLYNPMLP 266 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I+ +L +G E S+ +D F++ G+ + + K DG Sbjct: 267 G----IVADLKAKGLAVE-------SEGATVVFLDE----FKNKE-GEPMGVIIQKKDGG 310 Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLC 386 Y Y D+A K +YE D ++Y + S ++ + A+ A V E + + Sbjct: 311 YLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFG 370 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGS 419 + L +DG P K RAG + L ++DE VG Sbjct: 371 MM--LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGI 426 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD- 478 +V++ L + + FD+ + + N Y+QYAY R S+FR+A ++D + Sbjct: 427 GAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EIDEEQ 480 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 481 LAAAPVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH 536 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 ------CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|24113254|ref|NP_707764.1| arginyl-tRNA synthetase [Shigella flexneri 2a str. 301] gi|30063324|ref|NP_837495.1| arginyl-tRNA synthetase [Shigella flexneri 2a str. 2457T] gi|39932172|sp|Q83KQ3|SYR_SHIFL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|24052255|gb|AAN43471.1| arginine tRNA synthetase [Shigella flexneri 2a str. 301] gi|30041576|gb|AAP17304.1| arginine tRNA synthetase [Shigella flexneri 2a str. 2457T] gi|281601317|gb|ADA74301.1| Arginyl-tRNA synthetase [Shigella flexneri 2002017] gi|313650080|gb|EFS14493.1| arginyl-tRNA synthetase [Shigella flexneri 2a str. 2457T] gi|332757309|gb|EGJ87646.1| arginyl-tRNA synthetase [Shigella flexneri 2747-71] gi|332757427|gb|EGJ87762.1| arginyl-tRNA synthetase [Shigella flexneri K-671] gi|332766600|gb|EGJ96804.1| arginyl-tRNA synthetase [Shigella flexneri 2930-71] gi|333017694|gb|EGK37006.1| arginyl-tRNA synthetase [Shigella flexneri K-304] Length = 577 Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 146/583 (25%), Positives = 250/583 (42%), Gaps = 82/583 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G K T V +++ + N MHVGH R ++GDT + F G++V Sbjct: 97 QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDTAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + W +Q N +DL EG+Y A K+ Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276 E F E +VK +Q+ + R+ + L DI ++++ + R + + RD Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333 + + + GI+ K+K + + ++F G+ + + K DG Y Y Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDVFKNKEGEPMGVIIQKKDGGYLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389 D+A K +YE D ++Y + S ++ + A+ A V E + + + Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422 L +DG P K RAG + L ++DE VG +V Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 ++ L + + FD+ + + N Y+QYAY R S+FR+A +I + L Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLAAA 484 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 485 PVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH---- 536 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 --CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|332756015|gb|EGJ86368.1| arginyl-tRNA synthetase [Shigella flexneri 4343-70] gi|333003263|gb|EGK22809.1| arginyl-tRNA synthetase [Shigella flexneri K-218] Length = 577 Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 146/583 (25%), Positives = 250/583 (42%), Gaps = 82/583 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G K T V +++ + N MHVGH R ++GDT + F G++V Sbjct: 97 QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDTAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + W +Q N +DL EG+Y A K+ Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276 E F E +VK +Q+ + R+ + L DI ++++ + R + + RD Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333 + + + GI+ K+K + + ++F G+ + + K DG Y Y Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389 D+A K +YE D ++Y + S ++ + A+ A V E + + + Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422 L +DG P K RAG + L ++DE VG +V Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 ++ L + + FD+ + + N Y+QYAY R S+FR+A +I + L Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLAAA 484 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 485 PVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH---- 536 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 --CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|110805849|ref|YP_689369.1| arginyl-tRNA synthetase [Shigella flexneri 5 str. 8401] gi|123146957|sp|Q0T3Q1|SYR_SHIF8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|110615397|gb|ABF04064.1| arginine tRNA synthetase [Shigella flexneri 5 str. 8401] Length = 577 Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 146/583 (25%), Positives = 250/583 (42%), Gaps = 82/583 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G K T V +++ + N MHVGH R ++GDT + F G++V Sbjct: 97 QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDTAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + W +Q N +DL EG+Y A K+ Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276 E F E +VK +Q+ + R+ + L DI ++++ + R + + RD Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333 + + + GI+ K+K + + ++F G+ + + K DG Y Y Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389 D+A K +YE D ++Y + S ++ + A+ A V E + + + Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422 L +DG P K RAG + L ++DE VG +V Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPYMPADELEKLANAVGIGAV 429 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 ++ L + + FD+ + + N Y+QYAY R S+FR+A +I + L Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLAAA 484 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 485 PVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH---- 536 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 --CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|322374239|ref|ZP_08048771.1| arginine--tRNA ligase [Streptococcus sp. C150] gi|321276843|gb|EFX53916.1| arginine--tRNA ligase [Streptococcus sp. C150] Length = 563 Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 148/592 (25%), Positives = 253/592 (42%), Gaps = 93/592 (15%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G L+ A L++ L P IA I +I + + V G +IN + Sbjct: 26 LLETPKNADMGDLAF-PAFSLAKVLRKAPQMIAADIAEKIDAS-NFEKVEAVGP-YINFF 82 Query: 93 LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + +L ++ G Y IG G + + S N P +GH R V+ D LA Sbjct: 83 LDKSKISADVLGQVIAQGNHYADQNIGHGRNIAFDMSSPNIAKPFSIGHLRSTVIADALA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +++A GY+ R ++ D G Q L ++ W ++A+ N P +Y++ Sbjct: 143 NIVAKQGYKPVRINHLGDWGKQFGMLIVAYKKWGSEEAVKAN----PINELLQLYVRINA 198 Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267 + D E +W ++ D A+ + RD+ L N +D D + Sbjct: 199 EAEEDPSVDE----EAREWFRKLEAGDEEATALWQWFRDESLVEFNRLYDELGVSFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + +++D L +G + E S+ Q ++++ ++ P Sbjct: 255 GEAFYNDKMDEVVDLLTEKGLLQE-------SQGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L KSDG+ Y DLA Y K Y+ F IYV+G++ S + K+L+AV + + Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKAIYVVGNEQSAHFKQLKAVLKEMGYDWS 354 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 ++ + ++G K+S R G+ I L + E Sbjct: 355 D-DMTHVAFGLVTKNGK--KLSTRKGNVILLEPTIAEAVNRAQAQIEAKNPNLPNKEAVA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +++F L DFD V + + P YVQYA+AR +SI R+A D P Sbjct: 412 HAVGVGAIKFYDLKTDRMNGYDFDLDAMVSFEGETGP--YVQYAHARIQSILRKA-DFTP 468 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 D S D ++I + ++PR+I A+ EP +A + LA F+ Sbjct: 469 SAD---------ATYSLNDVESWEIIKLIQDFPRIINRASDNFEPSIVAKFAISLAQAFN 519 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R Q+ R RL L +A A+++ L ++GVE+P+EM Sbjct: 520 KYYAHTR-----ILDQSPERD---SRLALCYATATVLKEALRLLGVEAPDEM 563 >gi|331701595|ref|YP_004398554.1| arginyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929] gi|329128938|gb|AEB73491.1| Arginyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929] Length = 563 Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 151/602 (25%), Positives = 265/602 (44%), Gaps = 116/602 (19%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +E+P+ A G L+ A L++ P IA+ +V KID A ++N +L Sbjct: 28 LEKPKTLAMGDLAF-PAFSLAKVFHKAPNAIAQELVE--KIDQSSYEKVEAKGAYLNFFL 84 Query: 94 SP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 ++ +IL+ ++ G YG+N GKG V I+ S N P+ +GH R V+G+++A Sbjct: 85 DKGNFSNEILNEVLEEGSAYGQNDSGKGGNVPIDMSSPNIAKPISMGHLRSTVIGNSIAK 144 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVF-W---------------RYQQALYNNDSDL 196 L+ +GY ++ ++ D G Q L ++ W +Y +N D + Sbjct: 145 LLVKNGYHPIKDNHLGDWGTQFGKLIVAYKKWGNEEDVKKDPINNLVKYYVKFHNEDKEH 204 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PE + K+L D E+ + KW V S+++ KI + L + Sbjct: 205 PE---LDDEARETFKKLEDGNEEEVFLW---KWFRKV---SLESFNKI----YEKLGVTF 251 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D + E ++ + + I L +G + E S+ Q +D+ L Sbjct: 252 DTYNGEAFYN----DKMDEGIQILKDKGLLVE-------SQGAQVVKLDKYNL------- 293 Query: 317 GDDVDRP--LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371 P +LKSDG+ Y D+A Y Y+ + +YV+G++ + Y ++L+AV Sbjct: 294 -----NPALILKSDGATLYITRDIATAIYRDRTYKPAMN--LYVVGAEQTYYFQQLKAVL 346 Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD---------------- 415 + A+ N+ + +G K+S R+G I L V+D Sbjct: 347 LEMGLPSAE-NLHHIPFGLITVNGK--KLSTRSGRIILLDEVLDDAIDLAKKQIEAKNPD 403 Query: 416 ---------EVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463 EVG ++ F L KN + DF +++ + + P YVQY++AR S Sbjct: 404 LPNKDEVAKEVGVGAIIFGDL--KNERTNNIDFVLEDQLRFEGETGP--YVQYSHARAES 459 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+A DI DL N + D + + + L ++P V+++A EP ++A Sbjct: 460 ILRKAGDI------DLHGAN----KQLDDPAAWETVTALKDFPDVVKSACKDFEPSEIAK 509 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y LA F+ +++H + + + +L RL LV AV+ ++ LN++GV++P+ Sbjct: 510 YALRLAKSFNKYYAHSK-------ILVEDDQLAA-RLSLVKAVSIVLKESLNLLGVKAPD 561 Query: 584 EM 585 M Sbjct: 562 AM 563 >gi|269122231|ref|YP_003310408.1| arginyl-tRNA synthetase [Sebaldella termitidis ATCC 33386] gi|268616109|gb|ACZ10477.1| arginyl-tRNA synthetase [Sebaldella termitidis ATCC 33386] Length = 571 Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 140/599 (23%), Positives = 247/599 (41%), Gaps = 98/599 (16%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I I+ G +TN AM+ S+ LG +P IA+ + + ++ + IAG GFIN+ Sbjct: 26 IEIQSSNKKGFGDFATNFAMVNSKTLGKNPREIAQTFIDNFSENDIIEKLEIAGPGFINI 85 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +L ++ I +Y + + G K I++ S N MH+GH R ++GD++ Sbjct: 86 FLKSKFINSEFKKI--GKEDYDFSFLDNGKKTIIDYSSPNIAKRMHIGHLRSTIIGDSIK 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +M F+G+E+ + +I D G Q L + Q Y D P +Y+K + Sbjct: 144 RIMKFTGFEILADNHIGDWGTQFGKLIVGYDRWLDQKNYEED---PIEELERIYVKFSEE 200 Query: 212 -----ELADKYSSEL--LNFPEEK----WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 EL EL L +E+ W + D S++ KI K LNI D++ Sbjct: 201 SKNDPELESIAREELRKLQSGDERNNRLWHEFI-DISLKEYDKI----YKRLNITFDLYN 255 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 E ++ P DI+D L + E D D + F D Sbjct: 256 GESFYNDMMP----DILDILVSRKIAVE--------------DQDALVVFF-------DE 290 Query: 321 DRPL-----LKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAV 374 D L K DGS+ Y +DLA K + E D IY+ + +++ +A + Sbjct: 291 DTKLHPCIVQKKDGSFLYSTSDLATIKYRREVLHIDKAIYITDERQQDHFRQVFKIAEIL 350 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434 + V + + ++DG+ S R G+ I L ++DE + + + + KN + Sbjct: 351 GDGFDYEKVHVWFGIMRFKDGI---FSTRLGNIIKLNDLLDEAKKEVRKTIEI--KNPGI 405 Query: 435 LDFDFCKVKE-------------QSKENPVF---------------YVQYAYARCRSIFR 466 D + K+ E Q++ +PV Y+QY YAR S+FR Sbjct: 406 PDDEKEKISEIVGIGAIKYFDLSQNRTSPVIFEWEKVLSFEGNTGPYLQYTYARIMSVFR 465 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 + ++ ++ ++ + E D S + L +P ++ A P +A YL+ Sbjct: 466 KLNG--ENIGYNEESEIILESDIERDLS-----LMLLNFPNIVVKAGETYRPNLIADYLF 518 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A F ++ + L R+ L A ++ +GL+++G+++ + M Sbjct: 519 ETAKTFSTFYNQK------HIANETDLALRNSRITLASKTAHVLKAGLDLLGIKTVDRM 571 >gi|290581362|ref|YP_003485754.1| putative arginyl-tRNA synthase [Streptococcus mutans NN2025] gi|254998261|dbj|BAH88862.1| putative arginyl-tRNA synthase [Streptococcus mutans NN2025] Length = 563 Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 147/597 (24%), Positives = 264/597 (44%), Gaps = 103/597 (17%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E+P+ + G L+ L++ + P IA +V +I + + V G +IN + Sbjct: 26 LLEKPKKSSMGDLAF-PTFSLAKTMRKAPQIIASELVGQIN-NSYFEKVEAVGP-YINFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+ S + ++L ++ +Y + IG+G + I+ S N P +GH R V+GD L+ Sbjct: 83 LNKSEISAQVLKEVIKKREDYAQAAIGQGRNIVIDLSSPNIAKPFSIGHLRSTVIGDALS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GYE + ++ D G Q L ++ W ++A+ + D Y + + Sbjct: 143 NIFQKLGYETVKINHLGDWGKQFGLLIVAYKKWGSEEAVRAHPIDELLKLYVRINAETKN 202 Query: 211 KELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKIIRDDLKA-LNIQHDIFISEDDFH 266 D+ + E L +E+ L + + + +++M+ R L A L I D + E ++ Sbjct: 203 HPELDEEAREWFRKLENNDEEALALWQWFRDESLMEFNR--LYAELGIDFDSYNGEAFYN 260 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL- 325 + +++ LA +G + E SK Q ++++ ++ P L Sbjct: 261 ----DKMEEVVQLLAEKGLLEE-------SKGAQVVNLEKY-----------GIEHPALI 298 Query: 326 -KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381 KSDG+ Y DLA Y K Y+ F IYV+G + + + K+L+AV A + ++ Sbjct: 299 KKSDGATLYITRDLAAAIYRKRTYD--FAKAIYVVGQEQTAHFKQLKAVLAEMGYAWSK- 355 Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------- 416 ++ + ++G K+S R G+ I L + E Sbjct: 356 DIQHVSFGLVTKNGQ--KLSTRKGNVILLEPTIAEAVKRSLAQIDTKNPDLVNKEAVAHA 413 Query: 417 VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 VG +++F L + DFD V + + P YVQYA+AR +SI R+A Sbjct: 414 VGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKA------- 464 Query: 476 DFDLFPRNVIPQESE----FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 DF PQ +E DT ++I + ++P I A EP +A + LA Sbjct: 465 DFQ-------PQAAENYQLNDTESWEIIKLIQDFPNTIVKAADNFEPSLIARFAIHLAQS 517 Query: 532 FHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ +++H R ++P RL L +A A+++ L ++GVE+PNEM Sbjct: 518 FNKYYAHTRILDDSPERD-----------SRLALSYATATVLKEALALLGVEAPNEM 563 >gi|162455942|ref|YP_001618309.1| arginyl-tRNA synthetase [Sorangium cellulosum 'So ce 56'] gi|161166524|emb|CAN97829.1| argS [Sorangium cellulosum 'So ce 56'] Length = 577 Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 149/606 (24%), Positives = 241/606 (39%), Gaps = 118/606 (19%) Query: 38 RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 R H NAAM L + LG P +A IVA +++D V IAG GF+NL L +Y Sbjct: 32 RRSTHADYQANAAMALGKRLGRPPREVAAAIVAALELDGICRKVEIAGPGFVNLTLEDAY 91 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 L + L+ G G + V +++ N MHVGH R ++GD LA ++ Sbjct: 92 LTRELAE-TAGGGRLGIAPAAEPETVIVDYSGPNAAKEMHVGHLRSTIIGDALARVLEAL 150 Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198 G+ V R+ ++ D G L L+ F+R +A ++ D+ E Sbjct: 151 GHRVIRQNHLGDWGTPFGMLIEHMLDLGEAAASQELSVGDLNAFYRQARAKFDGDAAFAE 210 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 V G E + L W +V++ S + + R + + Sbjct: 211 RSRRRVVRLQGGDE-------QTLAL----WRQLVRE-STRYFDSVYRR--LGVTLTDAD 256 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYV--YEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 F E ++ P D+++ L R+G EG L + T K Sbjct: 257 FAGESFYNPMLP----DVVEELGRKGLARESEGALCVFPAGFTGKG-------------- 298 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA---- 371 G+ + + K DG Y Y DLA + + G ++YV+G+ S + + A A Sbjct: 299 GEPLPLIVRKQDGGYGYATTDLAAIRHRLTTVGARRIVYVVGAPQSQHFAMVFATAREAG 358 Query: 372 ----AAVSEKKAQINVLLCELVRLYRDGMPIKMSK-RAGDFITLRHVVDE---------- 416 A +E A +VL G KM K R+GD + L ++DE Sbjct: 359 WLTPPARAEHVAFGSVL----------GADKKMFKTRSGDTVKLSDLIDEATERAAKVVR 408 Query: 417 -----------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459 VG +V++ L + FD+ ++ + N Y+ YA+A Sbjct: 409 EKNPDLDAEAADAVARSVGVGAVKYADLSSDRIKDYVFDWDRML-AFEGNTAPYLMYAHA 467 Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 R RSIFR+A P ++ E +E L + L + V+E+ EP+ Sbjct: 468 RIRSIFRKAGVESPR------EAGIVLSEP----AERALALELLRFGAVLEDVAATLEPH 517 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 +L YL++LA F + R ++A + + RL L A ++ GL ++G+ Sbjct: 518 RLCGYLFELAGSFTSFYE------RCPVLRAESDDVRRSRLALCDLTAEVLAKGLGLLGI 571 Query: 580 ESPNEM 585 E+P M Sbjct: 572 EAPERM 577 >gi|315296537|gb|EFU55834.1| arginyl-tRNA synthetase [Escherichia coli MS 16-3] Length = 577 Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 145/584 (24%), Positives = 251/584 (42%), Gaps = 84/584 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G + K T V +++ + N MHVGH R ++GD + F G++V Sbjct: 97 QQALASD-RLGVAMPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + W +Q N +DL EG+Y A K+ Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276 E F E +VK +Q+ + R+ + L DI ++++ + R + + RD Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333 + + + GI+ K+K + + ++F G+ + + K DG Y Y Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389 D+A K +YE D ++Y + S ++ + A+ A V E + + + Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422 L +DG P K RAG + L ++DE VG +V Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-LFP 481 ++ L + + FD+ + + N Y+QYAY R S+FR+A ++D + L Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EIDEEQLAA 483 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 484 APVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH--- 536 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 ---CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|312863951|ref|ZP_07724188.1| arginine--tRNA ligase [Streptococcus vestibularis F0396] gi|322517649|ref|ZP_08070514.1| arginine--tRNA ligase [Streptococcus vestibularis ATCC 49124] gi|311100517|gb|EFQ58723.1| arginine--tRNA ligase [Streptococcus vestibularis F0396] gi|322123726|gb|EFX95311.1| arginine--tRNA ligase [Streptococcus vestibularis ATCC 49124] Length = 563 Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 148/595 (24%), Positives = 253/595 (42%), Gaps = 99/595 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G L+ A L++ L P IA I +I + + V G +IN + Sbjct: 26 LLETPKNADMGDLAF-PAFSLAKVLRKAPKMIAADIAEKIDAS-NFEKVEAVGP-YINFF 82 Query: 93 LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + +L ++ G Y IG G + + S N P +GH R V+ D LA Sbjct: 83 LDKSKISADVLGQVIAQGSHYADQNIGHGRNIAFDMSSPNIAKPFSIGHLRSTVIADALA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +++A GY+ R ++ D G Q L ++ W ++A+ N P +Y++ Sbjct: 143 NIVAKQGYKPVRINHLGDWGKQFGMLIVAYKKWGSEEAVKAN----PINELLQLYVRINA 198 Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267 + D E +W ++ D A+ + RD+ L N +D D + Sbjct: 199 EAEKDPSVDE----EAREWFRKLEAGDEEATALWQWFRDESLVEFNRLYDELDVSFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + +++D L +G + E S+ Q ++++ ++ P Sbjct: 255 GEAFYNDKMDEVVDILTEKGLLQE-------SQGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L KSDG+ Y DLA Y K Y+ F IYV+G++ S + K+L+AV + + Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKAIYVVGNEQSAHFKQLKAVLKEMGYDWS 354 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 ++ + ++G K+S R G+ I L + E Sbjct: 355 D-DMTHVAFGLVTKNGK--KLSTRKGNVILLEPTIAEAVNRAQAQIEAKNPNLPNKEAVA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +++F L DFD V + + P YVQYA+AR +SI R+A D P Sbjct: 412 HAVGVGAIKFYDLKTDRMNGYDFDLDAMVSFEGETGP--YVQYAHARIQSILRKA-DFTP 468 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 D S D ++I + ++PR+I A+ EP +A + LA F+ Sbjct: 469 SED---------ATYSLNDVESWEIIKLIQDFPRIINRASDNFEPSIVAKFAISLAQAFN 519 Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R E+P RL L +A A+++ L ++GVE+P+EM Sbjct: 520 KYYAHTRILDESPERD-----------SRLALCYATATVLKEALRLLGVEAPDEM 563 >gi|315230637|ref|YP_004071073.1| arginyl-tRNA synthetase [Thermococcus barophilus MP] gi|315183665|gb|ADT83850.1| arginyl-tRNA synthetase [Thermococcus barophilus MP] Length = 647 Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 169/682 (24%), Positives = 274/682 (40%), Gaps = 137/682 (20%) Query: 4 FADFSSRLKNYLKEI--DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 + D +K LKEI D K K I+ + G +T A L++ P Sbjct: 3 YDDIKEEVKLILKEIISDMLEKEGKSWDGEILFDETPSMELGDFATTVAFQLAKVFRKAP 62 Query: 62 LTIAELIVARIK--IDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIG 118 IA+ IV + K + + V +AG G+IN +L + + I+ I+ G +YG++ IG Sbjct: 63 RIIAQEIVEKTKNKLPEYISKVEVAGAGYINFFLDYEKFGKLIIEEILTKGEKYGKSNIG 122 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV IE S NPT P+H+GH R +++GDT+A +M GY V + YI+D G Q Sbjct: 123 KGKKVVIEHTSVNPTKPLHMGHARNSILGDTMARVMRTLGYNVEVQNYIDDLGIQF---- 178 Query: 179 LSVFWRY---------------QQALYNNDSDLPEG-YYPGVYLKHVGKELADKYSSELL 222 V W Y ++ + N D G Y V+ K +K EL+ Sbjct: 179 AQVMWGYLNLKEEFEKIKAEIEERCIKENSIDHVLGLLYVEVHRKMEENPEVEKEVRELM 238 Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKA---LNIQHDIFISEDDFHRGDPSPIRDIIDN 279 EE I + + ++++ ++ LNI +D+ E D R Sbjct: 239 KKLEEGDNEIA-ELGRRLAEEVVKAQMQTTYRLNIAYDLLSWESDIVRS----------- 286 Query: 280 LARQGYVYEGILPPPKSKTTQKCDMD-RKQLLFRSTMV---GD---DVDRP---LLKSDG 329 GI K Q + K+ ++ + GD D++ P L++SDG Sbjct: 287 ---------GIFEEAYRKIEQNEHFEWAKEGKYKGAFIMKLGDLFPDMENPDMVLIRSDG 337 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ--------- 380 + TY D+AY K+ +M+Y + D + K+ + K Sbjct: 338 TATYTGKDIAYHMWKFGLVSADMLYKIW-DRIMFEKKEHETWTTARDGKPMPGKFGHADI 396 Query: 381 -INVLLCE----------LVRL------YRDGMPI----------KMSKRAGDFITLRHV 413 INV+ E ++L YR+ + K S R G +I Sbjct: 397 VINVIGAEQRYPQKVVAYALKLLGYEEAYRNFHHLAYEHVVRPEGKFSGRKGTWIGF--T 454 Query: 414 VDEVGSDSVRFM--MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA------------ 459 VDEV +++V+ ++ KN L + + K+ E + Y Y+ Sbjct: 455 VDEVVNEAVKRAKELVEEKNPNLSEEEKKKIAEAVGIGAIRYNMLKYSPEKIITFRWEDV 514 Query: 460 ----------------RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503 RC SI R+A + DL F+ N S D E LI L+ Sbjct: 515 LNFEGESAPYIQYAHARCASILRKAMEKGIDLRFNNLLENA--DFSNLDRKEKDLIKLLS 572 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 +P +++ +P+ LA+Y ++A VF+ + L ++A L RL LV Sbjct: 573 RFPEIVKEVGTEIKPHLLAWYANEVAMVFNKFYM------ALPVLKAERGTLE-ERLLLV 625 Query: 564 HAVASIINSGLNIIGVESPNEM 585 A ++ + L ++G+E+P M Sbjct: 626 MATKQVLRNVLYLMGIEAPERM 647 >gi|222478607|ref|YP_002564844.1| arginyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239] gi|254782966|sp|B9LRF1|SYR_HALLT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|222451509|gb|ACM55774.1| arginyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239] Length = 602 Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 163/650 (25%), Positives = 281/650 (43%), Gaps = 115/650 (17%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 +F F S + + L + + + D + IERP D L+++ A L+ +G P Sbjct: 1 MFRQFRSEVADALGDALASLDLPT---DDLGIERPPDDMDATLASSVAFRLAGEVGDAPP 57 Query: 63 TIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKIL-SSIVVSGIEYGRNLIGKG 120 +A + + +D D + ++N + Y L +S V SG YG L + Sbjct: 58 NVAATVADAVDVDGYDYLAAVDTAGPYVNFHPGERYFVDTLDASAVDSG--YGA-LPDRD 114 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 T V +E SANPTGP+HVG R +VGD +A+L+ ++GY+V R YY+NDAG Q ++ Sbjct: 115 TSVVVEHTSANPTGPVHVGRARNPIVGDAVANLLEYAGYDVDRHYYVNDAGRQ-----MA 169 Query: 181 VF-WRYQQ----------ALYNNDSDLPEGYYPG-VYLKHVGKELADKYSS------ELL 222 VF W Y++ A + DL Y G YL+ E + + L Sbjct: 170 VFTWAYERFDESDLAGEPARARAEYDLVRYYRKGNAYLEEADPEAVEAAEEEIAAILQGL 229 Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282 +E+ V + V ++ +++ L L + D F+ E F R DI L Sbjct: 230 EAGDEETYERVGEV-VDTVLGGMKECLARLPAEFDEFVKETRFMR--DGSTDDIAARLKE 286 Query: 283 QGY-VYEGILPPPKSKTTQKCDMDR----KQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337 + VYE + + ++D K L+F L+SD + Y D Sbjct: 287 TDHAVYE--------EDAWQLELDDWGIDKNLVF-------------LRSDDTSLYTTRD 325 Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397 LA+ + K++ +D + V+G DH +L+A + ++ ++ V L DG Sbjct: 326 LAHHEWKFDN-YDRAVTVLGEDHKLQADQLDATLELLGNDIDRLGHVIYSYVNL-PDG-- 381 Query: 398 IKMSKRAGDFITLRHVVDE---------------------------------VGSDSVRF 424 KMS R G + L ++DE VG +VR+ Sbjct: 382 -KMSTRRGTGVMLDDLLDEAIDRAREAVETRMDDRIRDDDLTEEDVERIAHEVGIGAVRY 440 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD-------IFPDLD- 476 ++ ++ ++ + F++ + ++ F VQY +ARC I +A D + D + Sbjct: 441 DIVSKQPAKAITFEWEDALDFEGQSAPF-VQYVHARCCGILDEAADAGIEVPGVTADSEG 499 Query: 477 -FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 D+ +V E D + L+ +A +P IE+A EP+ +A + + A ++ Sbjct: 500 VVDVGALDVDATVFETDAAR-DLLREVARFPAAIESAADDLEPHTIATFTREFADAYNAF 558 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RE P V +++ +L R+ LV A + + L+++GVE+P M Sbjct: 559 Y---RECP---VVTSDDEELRAARVALVAAAKHTMANALDVLGVEAPESM 602 >gi|301300427|ref|ZP_07206628.1| arginine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851970|gb|EFK79653.1| arginine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 563 Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 151/590 (25%), Positives = 256/590 (43%), Gaps = 92/590 (15%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 IE+P+ G + A +LS+ L P I +V +I + V G ++N +L Sbjct: 28 IEKPKTLNLGDYAF-PAFVLSKVLRKAPQMITSELVEKID-QTGFEKVEAVGP-YVNFFL 84 Query: 94 SPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 K ILS ++ G YG +G G V I+ S N PM +GH R V+G++LA Sbjct: 85 DKKEFSKDILSEVLSEGSAYGNQDLGHGGNVPIDMSSPNIAKPMSMGHLRSTVIGNSLAL 144 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 L+ Y+ + ++ D G Q L ++ W ++ + + + YY + + V Sbjct: 145 LLEKVNYKPIKIDHLGDWGTQFGKLIVAYKLWGSEEEVKADPINNLLKYYVRFHEEDVNN 204 Query: 212 ELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 D+ + E L +E+ L + K + +++ K + LNI D + E ++ Sbjct: 205 PELDEEAREWFKKLEDGDEEALKLWKWFREESLKKFT-EVYDRLNITFDSYNGEAFYN-- 261 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--K 326 + +I D L +G + E S+ + D+++ +L P L K Sbjct: 262 --DKMDEITDLLQEKGLLKE-------SQGAEIVDLEKYEL------------NPALIRK 300 Query: 327 SDGSYTYFAADLAYFKCKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAVS-EKKAQINV 383 +DG+ Y DLA +Y R +D +YV+G + + + K+L+AV + + I+ Sbjct: 301 TDGATLYITRDLAAALYRY-RTYDFVQSLYVVGQEQTNHFKQLKAVLKEMGYDWSDDIHH 359 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------VG 418 + L+ K+S R+G I L V+D+ VG Sbjct: 360 IPFGLIT----SGGKKLSTRSGRVILLEEVLDDAVKLANKQIEEKNPNLADKEEVAEAVG 415 Query: 419 SDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 +V F L KN + FDF V+ + + P YVQY++AR SI R+A D+ +L Sbjct: 416 VGAVVFHDL--KNERINSFDFNLDEVVRFEGETGP--YVQYSHARAMSILRKAGDL--EL 469 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + D + D Q + LA +P ++ A EP +A Y LA F+ + Sbjct: 470 NSDNLEIS--------DPEAWQTLRLLAAFPETVKKAVSEYEPSVVAKYAIHLAKAFNKY 521 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++H R N+ RL LV +VA+ + L ++GV++PNEM Sbjct: 522 YAHSR--------ILNDDAEKNARLALVQSVATTLKESLRLLGVKAPNEM 563 >gi|332089609|gb|EGI94711.1| arginyl-tRNA synthetase [Shigella boydii 5216-82] Length = 577 Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 148/600 (24%), Positives = 253/600 (42%), Gaps = 94/600 (15%) Query: 37 PRDCAH----------GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK 86 P DC G N M +++ LG+ P +AE ++ + ++ V IAG Sbjct: 21 PADCEQQVRQSAKVQFGDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGP 80 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GFIN++L P++L + + + S G K T V +++ + N MHVGH R ++ Sbjct: 81 GFINIFLDPAFLAEHVQQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTII 138 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYP 202 GD + F G++V R ++ D G Q L + W +Q N +DL EG+Y Sbjct: 139 GDAAVRTLEFLGHKVIRANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYR 194 Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262 A K+ E F E +VK +Q+ + R+ + L DI +++ Sbjct: 195 D----------AKKHYDEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQ 238 Query: 263 DD--FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---G 317 + + R + + RD + + + GI+ K+K + + ++F G Sbjct: 239 NQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEG 297 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAA 373 + + + K DG Y Y D+A K +YE D ++Y + S ++ + A+ A Sbjct: 298 EPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGY 357 Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------- 416 V E + + + L +DG P K RAG + L ++DE Sbjct: 358 VPESVPLEHHMFGMM--LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMP 413 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466 VG +V++ L + + FD+ + + N Y+QYAY R S+FR Sbjct: 414 ADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFR 472 Query: 467 QAKDIFPDLDFD-LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 +A ++D + L VI +E E QL L ++ + P+ + YL Sbjct: 473 KA-----EIDEEQLAAAPVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYL 523 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 YDLA +F G + H + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 524 YDLAGLFSGFYEH------CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|67921649|ref|ZP_00515167.1| Arginyl-tRNA synthetase, class Ic [Crocosphaera watsonii WH 8501] gi|67856761|gb|EAM52002.1| Arginyl-tRNA synthetase, class Ic [Crocosphaera watsonii WH 8501] Length = 585 Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 153/596 (25%), Positives = 254/596 (42%), Gaps = 97/596 (16%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 + RD HG N A+ L++ LG +P IA+ I++ + +D ++ I G GFINL L Sbjct: 31 VTTARDLRHGDYQANIALPLAKKLGKNPREIAQTIISNLAVDTICETPTIGGPGFINLKL 90 Query: 94 SPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 P+YL L S+ GIE I T+V ++F S N MHVGH R ++GD + Sbjct: 91 KPNYLENKLKSLYQEQGLGIEK----IPDSTQVIVDFSSPNIAKEMHVGHLRSTIIGDCI 146 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A + F GY+V R ++ D G Q L + Y AL D+ L G Y + Sbjct: 147 ARTLEFLGYDVLRLNHVGDWGTQFGMLITYLKEVYPDALTQADA-LEIGDLVNFYKQ--- 202 Query: 211 KELADKYSSELLNFPEEKWLPIVK-----DYSVQA---MMKIIRDDLKALNIQHDIFISE 262 A K E F + +VK S QA + R + + + + D+ ++E Sbjct: 203 ---AKKRFDEDTEFQQRAREAVVKLQSGEQESSQAWELLCDQSRREFQQIYDRLDVKLTE 259 Query: 263 DDFHRGDP--SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319 RG+ +P + D+I L EGIL K +C L + GD Sbjct: 260 ----RGESFYNPYLDDVITALDA-----EGIL---KKDQGAQCVF----LEGFTNKSGDP 303 Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374 + + KSDG Y Y DLA + + E +IYV + S + ++ VA Sbjct: 304 LPLIVQKSDGGYNYATTDLAALRYRIKEDQAKRIIYVTDAGQSNHFAQVFQVANKANFLP 363 Query: 375 ------------------------SEKKAQINVLLCELVRLYRDGMPIKMS----KRAGD 406 S + ++ LL E + R + ++ K + D Sbjct: 364 DTVEVTHVPFGLVKGEDGKKLKTRSGETIKLKDLLNEAINYARKDLENRLQSEERKESED 423 Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466 FI +V VG +V++ L + S F + K+ + N Y+ YAYAR +SI R Sbjct: 424 FIN--NVAQTVGISAVKYADLSQNRSSDYIFSYDKML-ALQGNTAPYMLYAYARIQSISR 480 Query: 467 QAKDIFPDLDFDLFPRN---VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 + ++D++ N ++ +++E + + ++ L+E + +E + P +L Sbjct: 481 EG-----NIDYENLGENIQIILKEDTEMELG--KYLLQLSETIKEVEKTLL---PNRLCD 530 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 YLY+L+ F+ + + P L+ + RL L A + GL+++G+ Sbjct: 531 YLYELSKKFNRFYENC---PVLK----SEEPTKTSRLLLCDLTAKTLKLGLSLLGI 579 >gi|284028534|ref|YP_003378465.1| arginyl-tRNA synthetase [Kribbella flavida DSM 17836] gi|283807827|gb|ADB29666.1| arginyl-tRNA synthetase [Kribbella flavida DSM 17836] Length = 562 Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 148/589 (25%), Positives = 243/589 (41%), Gaps = 109/589 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH TN A+ L++ LG P +A +VA ++D IAG GF+NL L PS L Sbjct: 37 GHFQTNLALRLAKTLGTSPRAVAAELVAHAELDDLCAPAQIAGPGFVNLTLLPSTL---- 92 Query: 103 SSIVVSGI-EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161 +G+ E R+L G +V +++ N MHVGH R V+GD L +++ ++GYEV Sbjct: 93 ----AAGVNELPRSLPTTGRRVVVDYSQPNVAKQMHVGHLRSTVIGDALCNVLRYAGYEV 148 Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221 R+ ++ D G Q + + Q + + D + E+ Y Sbjct: 149 VRQNHVGDWGTQFGMM-VEQLLDEQTPVESLDLE----------------EMQQLYQRSR 191 Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI-QHDIFISEDDFHR-----GDPSPIRD 275 +F + P+ D S + ++ + D + I Q + IS +F R G P D Sbjct: 192 KHFDSD---PVFADRSRRRVVLLQSGDPRTRGIWQQLVDISLAEFDRVYALLGSPLTQAD 248 Query: 276 IID----NLARQGYVYE----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL--- 324 ++ N A QG V + G+L + Q F G D PL Sbjct: 249 VVGESAYNDALQGIVSDLAAAGLL----------TESGGAQCAFLPGFTGRD-GSPLPVI 297 Query: 325 -LKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAA---VSEKKA 379 KSDG + Y A DLA + + + D ++YV+ S + +++ A+A + E + Sbjct: 298 VQKSDGGFGYSATDLAAVRHRVRDLKADRIVYVVDHRQSLHFQQIFALARTARWLPETTS 357 Query: 380 QINVLLCELVRLYRDGMPIKMS---------------KRAGDFITLRHVVDE------VG 418 +V + L DG P K RAG + R +D VG Sbjct: 358 AEHVAFGTV--LGPDGKPFKTRDGGTVSLVSLLDAAIARAGALLADRTGIDRESVARAVG 415 Query: 419 SDSVRFMMLW--RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 +V++ L R N + D D V P Y+QYA+AR + +A Sbjct: 416 IGAVKYADLSSDRTNDYVFDLDRM-VAMTGNTGP--YLQYAHARLTRLLSKAG------- 465 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 P + +E +E +L + LA + ++ +P++L YLYD+AS + Sbjct: 466 ---HPEGQVTVLAE--PAEQRLALLLAGFGDAVQQVAETLQPHRLCTYLYDVASALSAFY 520 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P + + RL L A ++++ GL ++G+ +P+ M Sbjct: 521 ESCPVLP-------SEGETRTSRLALCTATRTVLHDGLALLGITAPDAM 562 >gi|227543907|ref|ZP_03973956.1| arginyl-tRNA synthetase [Lactobacillus reuteri CF48-3A] gi|300909654|ref|ZP_07127115.1| arginine--tRNA ligase [Lactobacillus reuteri SD2112] gi|227186108|gb|EEI66179.1| arginyl-tRNA synthetase [Lactobacillus reuteri CF48-3A] gi|300893519|gb|EFK86878.1| arginine--tRNA ligase [Lactobacillus reuteri SD2112] Length = 562 Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 159/615 (25%), Positives = 269/615 (43%), Gaps = 115/615 (18%) Query: 17 EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP 76 E+D K ++E KI ERP+D ++G + L++ L P IA +V ++ D Sbjct: 17 EMDVK-EIEAKI------ERPKDSSNGDYAF-PTFFLAKTLHKAPQMIASELVEKVDQD- 67 Query: 77 DVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGP 135 + V +AG +IN +L + + KIL +I+ YG +G + V I++ S N P Sbjct: 68 GFEKVVVAGP-YINFFLDKAQVGAKILQTILADPEHYGEIDLGHQSNVTIDYSSPNIAKP 126 Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQALYNNDS 194 M +GH R ++G+ +A ++ Y + R Y+ D G Q L A W + + + Sbjct: 127 MGMGHLRSTMIGEAVARILEKVNYNLIRIDYLGDWGTQFGKLMAAYEMWGDEAEVKKDPI 186 Query: 195 DLPEGYYPGVYLKHVG------KELADKYSSELLNFPEEKW--LPIVKDYSVQAMMKIIR 246 + YY V + + E + ++L + EE W ++ S++ ++ Sbjct: 187 NTLLKYY--VRINNEADEHPEYTEAGRDWFAKLEHGDEEAWRLWHWFREVSLERFQRV-- 242 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 K L++ D F E + PI+ + D + +L P S+ + D+D Sbjct: 243 --YKMLDVNFDSFNGEAFSAQKMEEPIQLLRD---------KNLLKP--SRGAEIVDLDE 289 Query: 307 KQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHS 361 L PLL KS+G+ TY DLA + K Y G +YV+G++ Sbjct: 290 YNL------------PPLLIIKSNGTTTYITRDLATALFRKRMY--GHAKSLYVVGAEQE 335 Query: 362 GYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD----- 415 Y K+L A + QI + L+ L +G KMS R G+ ++L V++ Sbjct: 336 TYFKQLRAALKEMGFNWWDQIEHISFGLMNL--NGK--KMSTRKGNVVSLEDVLNDSIDL 391 Query: 416 --------------------EVGSDSVRFMML--WRKNSELLDFDFCK-VKEQSKENPVF 452 EVG +V F L +R+N+ ++F VK + + P Sbjct: 392 ARKQIAEKNPDLENADEVAKEVGVGAVIFHDLKNYRRNA--VNFKLEDVVKFEGETGP-- 447 Query: 453 YVQYAYARCRSIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 YVQYA AR SI R+ +D F D+D + T +LI L +Y I+ Sbjct: 448 YVQYARARAESILRKGGIRD-FSDVDL-----------TNAGTEAWELISFLGQYSEAIK 495 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A + +P +A Y +LA F+ +++H R + + RL L AV+ ++ Sbjct: 496 RAALNYDPSVIAKYALELAKKFNQYYAHTR--------ILDKDEAQPARLALTQAVSDVL 547 Query: 571 NSGLNIIGVESPNEM 585 S LN++ +++P+EM Sbjct: 548 KSALNLLDIKAPDEM 562 >gi|28872251|ref|NP_794870.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000] gi|38258308|sp|Q87V03|SYR_PSESM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|28855505|gb|AAO58565.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tomato str. DC3000] Length = 578 Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 142/602 (23%), Positives = 253/602 (42%), Gaps = 101/602 (16%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE ++A + D V V IAG GF+N Sbjct: 30 IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + + L L + +S + G +V ++ + N MHVGH R ++GD +A Sbjct: 90 FQNTAALASRLDA-ALSDPQLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ F G V R+ ++ D G Q L + + + A + SDL E +Y Sbjct: 149 NVLEFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263 A + E F E +VK + A + K +++ H ++ ++ Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLTLWTRFKDISLSHCQQTYERLNVKLTPA 255 Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 D G+ + + +++++L G + E S Q ++ FR+ DD Sbjct: 256 DVM-GESAYNDDLANVVNDLKAAGLLVE-------SNGAQCVFLEE----FRT---ADDT 300 Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374 P++ K+ G Y Y DLA ++ K + D +Y + + + +++ VA A Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKA-DRALYFVDQRQALHFQQVFEVARRAGF 359 Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410 + Q+ + + RDG +K+ +RA + L Sbjct: 360 VHEGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAQERAYTLVKEKNPQVAEAEL 419 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQMLS-FEGNTAPYLLYAYTRVAGVFRKL-- 476 Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 FD +++ PQE E L LA++ + N P+ L YLYD Sbjct: 477 ---GTPFDASKGHIVLEAPQEQE-------LAARLAQFNETLNNVAEKGTPHVLCAYLYD 526 Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 LA +F + + G ENP + RL+L + GL+++G+E+ Sbjct: 527 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 576 Query: 584 EM 585 M Sbjct: 577 RM 578 >gi|172038489|ref|YP_001804990.1| arginyl-tRNA synthetase [Cyanothece sp. ATCC 51142] gi|226710999|sp|B1X0N5|SYR_CYAA5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|171699943|gb|ACB52924.1| arginyl-tRNA-synthetase [Cyanothece sp. ATCC 51142] Length = 585 Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 156/590 (26%), Positives = 251/590 (42%), Gaps = 93/590 (15%) Query: 38 RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 RD HG N A+ L++ LG +P IA++I+ + ++ ++ I G GFINL L SY Sbjct: 35 RDLRHGDYQANIALPLAKKLGKNPREIAQIIINNLSLNTICENPTIGGPGFINLKLKSSY 94 Query: 98 LRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154 L L S+ + GIE N KV ++F S N MHVGH R ++GD +A + Sbjct: 95 LETQLKSLYQNQRLGIEKVHN----ADKVIVDFSSPNIAKEMHVGHLRSTIIGDCIARTL 150 Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214 F GYEV R ++ D G Q L + Y AL D L G Y + A Sbjct: 151 EFLGYEVLRLNHVGDWGTQFGMLITYLKEVYPDALTQADV-LEIGDLVNFYKQ------A 203 Query: 215 DKYSSELLNFPEEKWLPIVKDYS--------VQAMMKIIRDDLKALNIQHDIFISEDDFH 266 K E F E +VK S Q + R + + + + D+ + E Sbjct: 204 KKRFDEDPKFQEAAREAVVKLQSGDEESRKAWQLLCDQSRREFQKIYDRLDVKLIE---- 259 Query: 267 RGDP--SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323 RG+ +P + D+I L QG + K + Q C L + GD + Sbjct: 260 RGESFYNPYLNDVIKALDEQGIL-------EKDQGAQ-CVF----LEGFTNKSGDPLPLI 307 Query: 324 LLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV-------- 374 + KSDG Y Y DLA K + E +IYV + S + ++ VA Sbjct: 308 VQKSDGGYNYATTDLAALKYRIQEDKAKRIIYVTDAGQSNHFAQVFQVAKKANFLPDTVD 367 Query: 375 --------------------SEKKAQINVLLCELVRLYRDGMPIKMS----KRAGDFITL 410 S + ++ LL E V R + ++ K + DFI Sbjct: 368 VTHVPFGLVKGEDGKKLKTRSGETVKLKDLLDEAVNYARKDLENRLQAEDRKESEDFIN- 426 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS-KENPVFYVQYAYARCRSIFRQAK 469 HV + VG +V++ L + + + D+ F K + + N Y+ YAYAR +SI R+ Sbjct: 427 -HVAETVGISAVKYADLSQ--NRISDYIFSYDKMLALQGNTAPYMLYAYARIQSISREG- 482 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 ++D++ N+ Q + +E++L +L + I+ + P +L YLY+L+ Sbjct: 483 ----NIDYENLGENI--QILLKEDTEIELGKYLLQLNETIKEVEKSLLPNRLCDYLYELS 536 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 F+ + + P L+ ++ + RL L A + GL+++G+ Sbjct: 537 KKFNRFYENC---PVLK----SDEPVKTSRLLLCDLTARTLKLGLSLLGI 579 >gi|110641994|ref|YP_669724.1| arginyl-tRNA synthetase [Escherichia coli 536] gi|191173026|ref|ZP_03034560.1| arginyl-tRNA synthetase [Escherichia coli F11] gi|300982204|ref|ZP_07175916.1| arginyl-tRNA synthetase [Escherichia coli MS 200-1] gi|123147998|sp|Q0TGV6|SYR_ECOL5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|110343586|gb|ABG69823.1| arginyl-tRNA synthetase [Escherichia coli 536] gi|190906737|gb|EDV66342.1| arginyl-tRNA synthetase [Escherichia coli F11] gi|300307274|gb|EFJ61794.1| arginyl-tRNA synthetase [Escherichia coli MS 200-1] gi|324013521|gb|EGB82740.1| arginyl-tRNA synthetase [Escherichia coli MS 60-1] Length = 577 Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 145/583 (24%), Positives = 250/583 (42%), Gaps = 82/583 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G + K T V +++ + N MHVGH R ++GD + F G++V Sbjct: 97 QQALASD-RLGVAMPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + W +Q N +DL EG+Y A K+ Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276 E F E +VK +Q+ + R+ + L DI ++++ + R + + RD Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333 + + + GI+ K+K + + ++F G+ + + K DG Y Y Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389 D+A K +YE D ++Y + S ++ + A+ A V E + + + Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422 L +DG P K RAG + L ++DE VG +V Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 ++ L + + FD+ + + N Y+QYAY R S+FR+A +I + L Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLAAA 484 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 485 PVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH---- 536 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 --CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|56461560|ref|YP_156841.1| arginyl-tRNA synthetase [Idiomarina loihiensis L2TR] gi|81362378|sp|Q5QV46|SYR_IDILO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|56180570|gb|AAV83292.1| Arginyl-tRNA synthetase [Idiomarina loihiensis L2TR] Length = 580 Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 143/593 (24%), Positives = 248/593 (41%), Gaps = 81/593 (13%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I ++RPRD +HG +TN A++L++P +P +AE IVA + + + + IAG GFIN Sbjct: 30 IQLDRPRDKSHGDFATNLALMLAKPAKSNPRQLAEAIVAAVPENSLLSKMDIAGPGFINF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +S L+ L++++ S ++ + + I++ S N MHVGH R A++GD ++ Sbjct: 90 TISQDQLKDQLTAMLNSD-SLNVDVAEESKTIVIDYSSPNLAKEMHVGHLRSAIIGDAVS 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 + F G++V R+ ++ D G Q L Y +AL N ++ Y Sbjct: 149 RVCEFLGHKVIRQNHVGDWGTQFGML-----LAYMEALDNQSAEYELSNLETFY------ 197 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD---LKALNIQHDIFIS--EDDFH 266 K + + + EE D + Q ++K+ D LK N D+ +S +D + Sbjct: 198 ----KAAKQRFDESEE-----FADRARQLVVKLQSGDEYCLKLWNQFIDVSLSHCQDVYD 248 Query: 267 RGDPSPIRDIIDNLARQGY--VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 R RD D +A Y G++ + K D + + + P+ Sbjct: 249 RLGVKLTRD--DVMAESAYNDKLPGVIEHLREKGLLTEDQGAQCVFLEEYKGKEGEPLPI 306 Query: 325 L--KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKA 379 + K G Y Y DLA + + E G D+++Y + + + + ++ +A A E Sbjct: 307 IVQKKGGGYLYATTDLAAIEYRQKELGGDHLMYFVDARQALHFDQIFTLARKAGFVEGDI 366 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 Q+N V + +DG P K R G L ++DE Sbjct: 367 QLNHYGFGTV-MGKDGKPYK--SRDGGVTKLADLLDEAERRALELLQQKTTDLSEEQQKR 423 Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 VG SV++ L + + FD+ + + N Y+ YA+ R SIF + D Sbjct: 424 VAEVVGISSVKYADLSKNRTSDYVFDWNHML-TFEGNTAPYLLYAFTRVNSIFDRLGDTA 482 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 D + D+ D EL L L + V+ P+ L +L+DLA F Sbjct: 483 FDRNADIILS---------DERELALANQLVRFNEVLHQVQDKAMPHFLCGFLFDLAGRF 533 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + L RL+L A+++ GL ++G+ + +M Sbjct: 534 SSFYE------ACPILNQEDEALRNSRLKLSMLTANVLKQGLELLGIPTLEKM 580 >gi|283832728|ref|ZP_06352469.1| arginine--tRNA ligase [Citrobacter youngae ATCC 29220] gi|291072410|gb|EFE10519.1| arginine--tRNA ligase [Citrobacter youngae ATCC 29220] Length = 577 Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 147/590 (24%), Positives = 251/590 (42%), Gaps = 96/590 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAQHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + G K T V +++ + N MHVGH R ++GD + F G+ V Sbjct: 97 QQALTCD-RLGVTQPAKQTVV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + W +Q N +DL EG+Y A K+ Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMALADL-EGFYRD----------AKKHY 200 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276 E F E +VK +Q + R+ + L DI +S++ + R + + RD Sbjct: 201 DEDEAFAERARSYVVK---LQGGDEYFREMWRKLV---DITMSQNQLTYDRLNVTLTRDD 254 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF---RSTMVGDDVDRPLLKSDGSYTY 333 + + + GI+ K+K + + ++F G+ + + K DG Y Y Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEYKNKEGEPMGVIIQKKDGGYLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLL 385 D+A K +YE D ++Y + S + V++ V +V + ++L Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMML 373 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418 +DG P K RAG + L ++DE VG Sbjct: 374 G------KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVG 425 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 +V++ L + + FD+ + + N Y+QYAY R S+FR+A D+D + Sbjct: 426 IGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEN 479 Query: 479 -LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE--PYKLAFYLYDLASVFHGH 535 L VI +E E QL L ++ + A +A+E P+ + YLYD+A +F G Sbjct: 480 ALTNAQVIIREDR----EAQLAARLLQFEETL--AVVAREGTPHVMCAYLYDVAGLFSGF 533 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + H + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 534 YEH------CPILSAENEEIRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|116334092|ref|YP_795619.1| arginyl-tRNA synthetase [Lactobacillus brevis ATCC 367] gi|122269224|sp|Q03QD4|SYR_LACBA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|116099439|gb|ABJ64588.1| arginyl-tRNA synthetase [Lactobacillus brevis ATCC 367] Length = 563 Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 145/600 (24%), Positives = 264/600 (44%), Gaps = 112/600 (18%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +ERP+ G ++ L++ L P IA+ + ++ + V + G ++N + Sbjct: 28 LERPKTSDKGDMAF-PTFTLAKLLHQAPQQIAQDLAEKLD-KTSFEKVEVVGP-YLNFFF 84 Query: 94 SP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 +Y + L +++ +G +YG+N G+G V I+ S N PM +GH R V+G+++A Sbjct: 85 DKGAYSAETLQTVLTAGADYGQNDDGQGGNVPIDMSSPNIAKPMSMGHLRSTVIGNSIAE 144 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG-------YYPGVY 205 ++ +GY ++ ++ D G Q L + L+ N++D+ YY + Sbjct: 145 ILTKNGYHPIKDNHLGDWGTQFGKLITAY------KLWGNEADVKADPINKLVEYYVRFH 198 Query: 206 LKHVGK----ELADKYSSELLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 + V K + A ++ +L N EE +W +D S+Q D + L + Sbjct: 199 KEDVDKPELDDTAREWFRKLENGDEEAHELWQWF---RDASLQEF----NDVYEKLGVTF 251 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D F E ++ + +++ L + + E S+ Q D+ + L Sbjct: 252 DTFNGEAFYN----DKLEEVVQILKDKNLLVE-------SQGAQVVDLSKYNL------- 293 Query: 317 GDDVDRP--LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371 P +LKSDG+ Y D+A Y Y + +YV+GS+ + Y K+L+AV Sbjct: 294 -----NPALILKSDGASLYITRDIATALYRDRTYHPAKN--LYVVGSEQTYYFKQLKAVL 346 Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD---------------- 415 + A ++ + DG K+S R+G I L V+D Sbjct: 347 QEMGVPSAD-DLEHIPFGLITVDGK--KLSTRSGRIILLAKVLDDSVKLAAEEINEKNPD 403 Query: 416 ---------EVGSDSVRFMMLWRKNSELLDFDFC-KVKEQSKENPVFYVQYAYARCRSIF 465 +VG ++ F L + + +DF ++K + + P YVQY++AR SI Sbjct: 404 LANKDEVAQQVGVGAIVFGDLKNERTNNIDFVLADQLKFEGETGP--YVQYSHARAESIL 461 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 R+A + D N I +DT I LA++P +++ A EP +A Y Sbjct: 462 RKAGKVTITTD-----GNQISDPEAWDT-----IKTLADFPAMVKMACDEFEPSVIAKYA 511 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA F+ +++H + + + +L RL LV AV++++ L ++GV++P+EM Sbjct: 512 IRLAKTFNKYYAHSK-------ILTEDAELP-ARLALVKAVSTVLKESLRLLGVQAPDEM 563 >gi|331267177|ref|YP_004326807.1| arginyl-tRNA synthetase [Streptococcus oralis Uo5] gi|326683849|emb|CBZ01467.1| arginyl-tRNA synthetase [Streptococcus oralis Uo5] Length = 563 Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 147/595 (24%), Positives = 251/595 (42%), Gaps = 99/595 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G ++ A L++ P IA I KI+ +A ++N + Sbjct: 26 LLETPKNSEMGDIAF-PAFSLAKVERKAPQMIAADIAE--KINSQAFEKVVAIGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + ++L ++ Y IGK V I+ S N P +GH R V+GD+L+ Sbjct: 83 LDKSAISAQVLQDVITEKDHYADQTIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + GY+ + ++ D G Q L ++ W ++A+ + D LK Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGNEEAVKAHPID--------ELLKLYV 194 Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267 + A+ L+ +W ++ D A+ + RD+ L N ++ E D + Sbjct: 195 RINAEAEKDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELQVEFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + I+D LA +G + E S+ Q ++++ ++ P Sbjct: 255 GEAFYNDKMDAIVDILAEKGLLVE-------SEGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L KSDG+ Y DLA Y K +Y+ F IYV+G + S + K+L+AV + + Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 Q +++ + ++G K+S R G+ I L + E Sbjct: 355 Q-DIVHVPFGLVTKEGK--KLSTRKGNVILLEPTIAEAVSRAKAQIEAKNPELENKDQVA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +++F L + DFD V + + P YVQYAYAR +SI R+A Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD---- 465 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 F N S D ++I L ++PR+I A EP +A + LA F+ Sbjct: 466 ------FKPNTAGNYSLNDAESWEIIKLLQDFPRIINRAADNFEPSIIAKFAISLAQAFN 519 Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R E+P RL L +A A ++ L ++GVE+P +M Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563 >gi|300819860|ref|ZP_07100045.1| arginyl-tRNA synthetase [Escherichia coli MS 107-1] gi|300527557|gb|EFK48619.1| arginyl-tRNA synthetase [Escherichia coli MS 107-1] Length = 577 Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 145/583 (24%), Positives = 250/583 (42%), Gaps = 82/583 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNSIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G + K T V +++ + N MHVGH R ++GD + F G++V Sbjct: 97 QQALASD-RLGVSTPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + W +Q N +DL EG+Y A K+ Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276 E F E +VK +Q+ + R+ + L DI ++++ + R + + RD Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333 + + + GI+ K+K + + ++F G+ + + K DG Y Y Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389 D+A K +YE D ++Y + S ++ + A+ A V E + + + Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422 L +DG P K RAG + L ++DE VG +V Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 ++ L + + FD+ + + N Y+QYAY R S+FR+A +I + L Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLAAA 484 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 485 PVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH---- 536 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 --CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|309813013|ref|ZP_07706741.1| arginine--tRNA ligase [Dermacoccus sp. Ellin185] gi|308433085|gb|EFP56989.1| arginine--tRNA ligase [Dermacoccus sp. Ellin185] Length = 594 Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 148/596 (24%), Positives = 254/596 (42%), Gaps = 98/596 (16%) Query: 45 LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV----DSVFIAGKGFINLYLSPSYLRK 100 + NAAM L++ +G +P +A IV ++ D +V D V IAG GF+N+ LS ++ Sbjct: 42 VQVNAAMALAKKVGKNPREVASAIVEALRADDEVMALVDDVEIAGPGFLNITLSTDWVAA 101 Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 S+I+ G G K + I++ S N MHVGH R VVGD+LA ++ G+ Sbjct: 102 QASTILADG-SLGVAPAAKTEIIPIDYSSPNVAKEMHVGHLRTTVVGDSLARVLERLGHT 160 Query: 161 VTREYYINDAGAQINTLALSVFW----RYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216 V R+ ++ D G L + + AL +D P +Y K E A+ Sbjct: 161 VIRQNHVGDWGTPFGMLIEHLLEVGEDSPEAALLESD---PNAFYQAARTKFDTAEKAEP 217 Query: 217 YSSEL-LNFPEEKWLPIVKDYSVQAMM---KIIRDDLKALNIQHDIF-ISEDDFHRGDPS 271 S+ N K + +++ + + K++ N + + ++ D S Sbjct: 218 AGSKGDFNTRARKRVTLLQGGDPETLAHWNKLMERSKAYFNKVYGLLGVTLTDADLAGES 277 Query: 272 PIRD----IIDNLARQG--YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-DDVDRPL 324 D I D+L +G V +G L C +F+ G DD PL Sbjct: 278 TYNDELAGICDDLESRGIAVVSDGAL----------C-------IFQDEFTGRDDAPVPL 320 Query: 325 L--KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKK 378 + KSDG Y Y DLA + + ++ D M+YV+G+ + + + A A + + Sbjct: 321 IIRKSDGGYGYATTDLATVRHRSFDLQGDRMVYVVGAPQNLHFRMTWAAADKAGYIRPES 380 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 I+V + + L +DG K R+GD + L ++ E Sbjct: 381 TPIHVQIGSV--LGKDGKMFKT--RSGDSVLLMDLLGEAVDRAAGVVSESKAEMSDEERA 436 Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VG +V++ L + FDF ++ + N Y+QYA R RSI +A + Sbjct: 437 VVARQVGIGAVKYADLSVSHDSEYIFDFDRMLALTG-NTGPYLQYAATRIRSILARAAEA 495 Query: 472 --FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 P + L + +E L + L +Y V+ + EP++LA YL++LA Sbjct: 496 GYSPAAEITL-----------GEDAERALALKLLDYGAVVAAVGESLEPHRLAGYLFELA 544 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + F + + ++A++ + RL L ++ GL+++G+E+P +M Sbjct: 545 TTFTAFYE------KCPVLKADDDDVRASRLALCELTLGVLVDGLSLLGIETPEKM 594 >gi|307705749|ref|ZP_07642594.1| arginyl-tRNA synthetase [Streptococcus mitis SK597] gi|307620667|gb|EFN99758.1| arginyl-tRNA synthetase [Streptococcus mitis SK597] Length = 563 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 145/596 (24%), Positives = 250/596 (41%), Gaps = 101/596 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G ++ A + + AEL KI+ +A ++N + Sbjct: 26 LLETPKNSEMGDIAFPAFSLAKVERKAPQMIAAELAE---KINSQAFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + ++L +++ Y IGK V I+ S N P +GH R V+GD+L+ Sbjct: 83 LDKSAISAQVLQAVITEKEHYADQTIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + GY+ + ++ D G Q L ++ W ++A+ + D LK Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194 Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267 + A+ + L+ +W ++ D A+ + RD+ L N ++ + D + Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELKVDFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + ++D L+ +G + E S+ Q ++++ ++ P Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLVE-------SEGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKK 378 L KSDG+ Y DLA Y K +Y+ F IYV+G + S + K+L+AV + + Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLKEMGYDWS 354 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLR-------------------------HV 413 I + C LV ++G K+S R G+ I L HV Sbjct: 355 DDITHVPCGLVT--KEGK--KLSTRKGNVILLEPTVAEAVSRAKAQIEDKNPELENKDHV 410 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 VG +++F L + DFD V + + P YVQYAYAR +SI R+A Sbjct: 411 AHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD--- 465 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 F S D ++I + ++PR+I A EP +A + LA F Sbjct: 466 -------FKPETAGNYSLNDAESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQAF 518 Query: 533 HGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +++H R ENP RL L +A A ++ L ++GVE+P +M Sbjct: 519 NKYYAHTRILDENPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563 >gi|293415191|ref|ZP_06657834.1| arginyl-tRNA synthetase [Escherichia coli B185] gi|331653286|ref|ZP_08354291.1| arginine--tRNA ligase [Escherichia coli M718] gi|291432839|gb|EFF05818.1| arginyl-tRNA synthetase [Escherichia coli B185] gi|331049384|gb|EGI21456.1| arginine--tRNA ligase [Escherichia coli M718] Length = 577 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 145/584 (24%), Positives = 250/584 (42%), Gaps = 84/584 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G K T V +++ + N MHVGH R ++GD + F G++V Sbjct: 97 QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + W +Q N +DL EG+Y A K+ Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276 E F E +VK +Q+ + R+ + L DI ++++ + R + + RD Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333 + + + GI+ K+K + + ++F G+ + + K DG Y Y Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389 D+A K +YE D ++Y + S ++ + A+ A V E + + + Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422 L +DG P K RAG + L ++DE VG +V Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-LFP 481 ++ L + + FD+ + + N Y+QYAY R S+FR+A ++D + L Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EIDEEQLAT 483 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 484 APVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH--- 536 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 ---CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|306834549|ref|ZP_07467662.1| arginine--tRNA ligase [Streptococcus bovis ATCC 700338] gi|296777690|gb|ADH43107.1| arginyl-tRNA synthetase [uncultured bacterium MID12] gi|304423351|gb|EFM26504.1| arginine--tRNA ligase [Streptococcus bovis ATCC 700338] Length = 563 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 156/622 (25%), Positives = 277/622 (44%), Gaps = 110/622 (17%) Query: 8 SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 + R++N + E+D +++I++ ++E P++ G L+ A L++ L P IA Sbjct: 8 AERIQNIVPELD-----QEQIIN--LLEIPKNSDMGDLAF-PAFSLAKILRKAPQMIAAD 59 Query: 68 IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIE 126 + K+D A +IN +L + IL ++ +G +Y +G+G V I+ Sbjct: 60 VAE--KMDATGFEKIEAVGPYINFFLDKKSISADILGQVIANGSDYASQDLGEGRNVAID 117 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRY 185 S N P +GH R V+GD+LA++ GY+ + ++ D G Q L ++ W Sbjct: 118 MSSPNIAKPFSIGHLRSTVIGDSLANIFEKLGYKAVKINHLGDWGKQFGMLIVAYKKWGD 177 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAMMK 243 ++A+ + D LK + A+ + L+ +W ++ D ++ + Sbjct: 178 EEAVKAHPID--------ELLKLYVRINAEAETQPELDEEAREWFRKLEAGDEEAISLWQ 229 Query: 244 IIRDD-LKALNIQHD-IFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298 RD+ L N +D + +S D F+ G+ + +++D L +G + E S+ Sbjct: 230 WFRDESLVEFNRLYDELGVSFDSFN-GEAFYNDKMDEVVDILTEKGLLEE-------SQG 281 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMI 353 Q ++++ ++ P L KSDG+ Y DLA Y K Y+ F I Sbjct: 282 AQVVNLEKY-----------GIEHPALIKKSDGATLYITRDLAAALYRKRTYD--FAKAI 328 Query: 354 YVMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412 YV+G++ S + K+L+AV + E I + LV ++G K+S R G+ I L Sbjct: 329 YVVGNEQSAHFKQLKAVLNEMGFEWNEDITHVPFGLVT--KEGK--KLSTRKGNVILLEP 384 Query: 413 VVDE-------------------------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQS 446 + E VG +++F L DFD V + Sbjct: 385 TIAEAVKRAEDQINAKNPNLADKEAVAHAVGVGAIKFYDLKTDRLNGYDFDLDAMVSFEG 444 Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 + P YVQYA+AR +SI R+A+ F +V S D +++ + ++P Sbjct: 445 ETGP--YVQYAHARIQSILRKAE----------FTPSVNQVYSLDDAESWEIVKLIQDFP 492 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLV 563 R+I+ A EP +A + +LA F+ +++H R E+P RL L Sbjct: 493 RIIKRAADNFEPSIVAKFAINLAQSFNKYYAHTRILDESPERD-----------SRLALS 541 Query: 564 HAVASIINSGLNIIGVESPNEM 585 +A A+++ L ++GVE+PNEM Sbjct: 542 YATATVLKEALRLLGVEAPNEM 563 >gi|157161347|ref|YP_001458665.1| arginyl-tRNA synthetase [Escherichia coli HS] gi|166987302|sp|A8A178|SYR_ECOHS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|157067027|gb|ABV06282.1| arginyl-tRNA synthetase [Escherichia coli HS] Length = 577 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 143/588 (24%), Positives = 251/588 (42%), Gaps = 92/588 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGT----KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158 + S + +G T + +++ + N MHVGH R ++GD + F G Sbjct: 97 QQALAS------DRLGVATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLG 150 Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELA 214 ++V R ++ D G Q L + W +Q N +DL EG+Y A Sbjct: 151 HKVIRANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------A 196 Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSP 272 K+ E F E +VK +Q+ + R+ + L DI ++++ + R + + Sbjct: 197 KKHYDEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTL 250 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDG 329 RD + + + GI+ K+K + + ++F G+ + + K DG Sbjct: 251 TRDDVMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDG 309 Query: 330 SYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLL 385 Y Y D+A K +YE D ++Y + S ++ + A+ A V E + + Sbjct: 310 GYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMF 369 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418 + L +DG P K RAG + L ++DE VG Sbjct: 370 GMM--LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADGLEKLANAVG 425 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 +V++ L + + FD+ + + N Y+QYAY R S+FR+A ++D + Sbjct: 426 IGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EIDEE 479 Query: 479 -LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 L VI +E E QL L ++ + P+ + YLYDLA +F G + Sbjct: 480 QLAAAPVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYE 535 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 536 H------CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|90022024|ref|YP_527851.1| arginyl-tRNA synthetase [Saccharophagus degradans 2-40] gi|109895032|sp|Q21I40|SYR_SACD2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|89951624|gb|ABD81639.1| arginyl-tRNA synthetase [Saccharophagus degradans 2-40] Length = 579 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 141/595 (23%), Positives = 245/595 (41%), Gaps = 94/595 (15%) Query: 38 RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 + G N AM ++ L +P +A+ I+ + ++ V IAG GFIN++L P + Sbjct: 32 KKAGFGDYQANGAMGAAKALKTNPREVAQKIIDNLDLNGIASKVEIAGPGFINIHLDPKW 91 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 L + + V + G V I++ S N MHVGH R ++GD +A ++ F+ Sbjct: 92 LAQ-QTVAVTNSTNLGILPKNNPETVVIDYSSPNLAKEMHVGHLRSTIIGDAIARVLEFT 150 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK--ELAD 215 G +V R+ ++ D G Q L + + L G P + L+ + + A Sbjct: 151 GDKVIRQNHVGDWGTQFGMLIAEL-----------EDQLGSGERPELALQDLEGFYQQAK 199 Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISEDDFHR 267 K+ + F + +VK S A + + + + +++ H ++ + E D R Sbjct: 200 KHFDDDPAFADRARDYVVKLQSGDAQVNKLWQEFRRVSLLHAEEIYRKLNVTLGEADV-R 258 Query: 268 GDPSPIRD---IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR--STMVGDDVDR 322 G+ + D ++ L QG E D K + + GD Sbjct: 259 GESAYNDDLAPVVAELEAQGLAVE--------------DQGAKVVFLHELADKNGDPSVA 304 Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 + K DG Y Y +DLA +Y G + ++Y + + S +++++ +A Sbjct: 305 IIQKKDGGYLYSTSDLAAL--RYRVGTLKANRILYFIDARQSLHMQQVFTLARKAGFADE 362 Query: 380 QINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD-- 436 ++ L DG P K R+G + L ++DE + + + KN +L + Sbjct: 363 WLSTEHHAFGTMLGSDGKPFKT--RSGGTVKLAQLLDEAVERAAKEVRT--KNPDLTEEE 418 Query: 437 ---------------FDFCKVKEQS-----------KENPVFYVQYAYARCRSIFRQAKD 470 D CK + + N Y+QYAY R RSIFR+A + Sbjct: 419 MAEVASKVGIGAVKYADLCKTRTNDYVFNWESMLAFEGNTGPYMQYAYTRIRSIFRRANE 478 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 + D F V E + E+QL + L + P ++E P+ + YLYDLAS Sbjct: 479 -----NMDTFESEVNLTEPQ----EVQLAIKLLQLPEIVEQIAADAYPHVMCNYLYDLAS 529 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +F + P L+ + + RLQL VA + GL+++G+E +M Sbjct: 530 LFMTFY---EACPILK--EGVEPAVKTSRLQLSKGVARTLAQGLDLLGIEVMEKM 579 >gi|193065443|ref|ZP_03046512.1| arginyl-tRNA synthetase [Escherichia coli E22] gi|260844286|ref|YP_003222064.1| arginyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009] gi|260855816|ref|YP_003229707.1| arginyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368] gi|260868474|ref|YP_003234876.1| arginyl-tRNA synthetase [Escherichia coli O111:H- str. 11128] gi|192926848|gb|EDV81473.1| arginyl-tRNA synthetase [Escherichia coli E22] gi|257754465|dbj|BAI25967.1| arginyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368] gi|257759433|dbj|BAI30930.1| arginyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009] gi|257764830|dbj|BAI36325.1| arginyl-tRNA synthetase [Escherichia coli O111:H- str. 11128] gi|323152635|gb|EFZ38911.1| arginyl-tRNA synthetase [Escherichia coli EPECa14] gi|323158639|gb|EFZ44653.1| arginyl-tRNA synthetase [Escherichia coli E128010] gi|323174607|gb|EFZ60228.1| arginyl-tRNA synthetase [Escherichia coli LT-68] gi|323180673|gb|EFZ66218.1| arginyl-tRNA synthetase [Escherichia coli 1180] Length = 577 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 145/583 (24%), Positives = 250/583 (42%), Gaps = 82/583 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G + K T V +++ + N MHVGH R ++GD + F G++V Sbjct: 97 QQALASD-RLGVSTPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + W +Q N +DL EG+Y A K+ Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276 E F E +VK +Q+ + R+ + L DI ++++ + R + + RD Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333 + + + GI+ K+K + + ++F G+ + + K DG Y Y Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389 D+A K +YE D ++Y + S ++ + A+ A V E + + + Sbjct: 314 TTTDIACAKYRYESLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422 L +DG P K RAG + L ++DE VG +V Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 ++ L + + FD+ + + N Y+QYAY R S+FR+A +I + L Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLAAA 484 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 485 PVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH---- 536 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 --CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|187731263|ref|YP_001880686.1| arginyl-tRNA synthetase [Shigella boydii CDC 3083-94] gi|218554464|ref|YP_002387377.1| arginyl-tRNA synthetase [Escherichia coli IAI1] gi|256017920|ref|ZP_05431785.1| arginyl-tRNA synthetase [Shigella sp. D9] gi|300904762|ref|ZP_07122591.1| arginyl-tRNA synthetase [Escherichia coli MS 84-1] gi|300917544|ref|ZP_07134200.1| arginyl-tRNA synthetase [Escherichia coli MS 115-1] gi|301306901|ref|ZP_07212947.1| arginyl-tRNA synthetase [Escherichia coli MS 124-1] gi|332278952|ref|ZP_08391365.1| arginyl-tRNA synthetase [Shigella sp. D9] gi|226701378|sp|B7M2G7|SYR_ECO8A RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|238689519|sp|B2U4X7|SYR_SHIB3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|187428255|gb|ACD07529.1| arginyl-tRNA synthetase [Shigella boydii CDC 3083-94] gi|218361232|emb|CAQ98816.1| arginyl-tRNA synthetase [Escherichia coli IAI1] gi|300403322|gb|EFJ86860.1| arginyl-tRNA synthetase [Escherichia coli MS 84-1] gi|300415223|gb|EFJ98533.1| arginyl-tRNA synthetase [Escherichia coli MS 115-1] gi|300837876|gb|EFK65636.1| arginyl-tRNA synthetase [Escherichia coli MS 124-1] gi|315257291|gb|EFU37259.1| arginyl-tRNA synthetase [Escherichia coli MS 85-1] gi|320177414|gb|EFW52415.1| Arginyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112] gi|320187322|gb|EFW62019.1| Arginyl-tRNA synthetase [Shigella flexneri CDC 796-83] gi|320198571|gb|EFW73171.1| Arginyl-tRNA synthetase [Escherichia coli EC4100B] gi|324118936|gb|EGC12825.1| arginyl-tRNA synthetase [Escherichia coli E1167] gi|332101304|gb|EGJ04650.1| arginyl-tRNA synthetase [Shigella sp. D9] Length = 577 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 145/583 (24%), Positives = 250/583 (42%), Gaps = 82/583 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G + K T V +++ + N MHVGH R ++GD + F G++V Sbjct: 97 QQALASD-RLGVSTPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + W +Q N +DL EG+Y A K+ Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276 E F E +VK +Q+ + R+ + L DI ++++ + R + + RD Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333 + + + GI+ K+K + + ++F G+ + + K DG Y Y Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389 D+A K +YE D ++Y + S ++ + A+ A V E + + + Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422 L +DG P K RAG + L ++DE VG +V Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 ++ L + + FD+ + + N Y+QYAY R S+FR+A +I + L Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLAAA 484 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 485 PVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH---- 536 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 --CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|194429348|ref|ZP_03061874.1| arginyl-tRNA synthetase [Escherichia coli B171] gi|194412655|gb|EDX28951.1| arginyl-tRNA synthetase [Escherichia coli B171] Length = 577 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 145/583 (24%), Positives = 250/583 (42%), Gaps = 82/583 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G + K T V +++ + N MHVGH R ++GD + F G++V Sbjct: 97 QQALASD-RLGVSTPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + W +Q N +DL EG+Y A K+ Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276 E F E +VK +Q+ + R+ + L DI ++++ + R + + RD Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333 + + + GI+ K+K + + ++F G+ + + K DG Y Y Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389 D+A K +YE D ++Y + S ++ + A+ A V E + + + Sbjct: 314 TTTDIACAKYRYESLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422 L +DG P K RAG + L ++DE VG +V Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDETLERARRLVAEKNPDMPADELEKLANAVGIGAV 429 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 ++ L + + FD+ + + N Y+QYAY R S+FR+A +I + L Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLAAA 484 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 485 PVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH---- 536 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 --CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|170769348|ref|ZP_02903801.1| arginyl-tRNA synthetase [Escherichia albertii TW07627] gi|170121672|gb|EDS90603.1| arginyl-tRNA synthetase [Escherichia albertii TW07627] Length = 577 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 143/586 (24%), Positives = 249/586 (42%), Gaps = 88/586 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGT----KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158 + S + +G T + +++ + N MHVGH R ++GD + F G Sbjct: 97 QQALAS------DRLGIATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLG 150 Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYN-NDSDLP--EGYYPGVYLKHVGKELAD 215 + V R ++ D G Q L + W +Q N D +L EG+Y A Sbjct: 151 HNVIRANHVGDWGTQFGML---IAWLEKQQQENAGDMELADLEGFYRD----------AK 197 Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPI 273 K+ E F E +VK +Q+ + R+ + L DI ++++ + R + + Sbjct: 198 KHYDEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLT 251 Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGS 330 RD + + + GI+ K+K + + ++F G+ + + K DG Sbjct: 252 RDDVMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGG 310 Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLC 386 Y Y D+A K +YE D ++Y + S ++ + A+ A V E + + Sbjct: 311 YLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFG 370 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGS 419 + L +DG P K RAG + L ++DE VG Sbjct: 371 MM--LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGI 426 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 +V++ L + + FD+ + + N Y+QYAY R S+FR+A +I + L Sbjct: 427 GAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EISEE---QL 481 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 482 AAAPVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH- 536 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 -----CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|16129828|ref|NP_416390.1| arginyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655] gi|89108716|ref|AP_002496.1| arginyl-tRNA synthetase [Escherichia coli str. K-12 substr. W3110] gi|170081532|ref|YP_001730852.1| arginyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B] gi|188493635|ref|ZP_03000905.1| arginyl-tRNA synthetase [Escherichia coli 53638] gi|194434108|ref|ZP_03066377.1| arginyl-tRNA synthetase [Shigella dysenteriae 1012] gi|238901091|ref|YP_002926887.1| arginyl-tRNA synthetase [Escherichia coli BW2952] gi|253773167|ref|YP_003035998.1| arginyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161936|ref|YP_003045044.1| arginyl-tRNA synthetase [Escherichia coli B str. REL606] gi|256022459|ref|ZP_05436324.1| arginyl-tRNA synthetase [Escherichia sp. 4_1_40B] gi|291283058|ref|YP_003499876.1| Arginyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615] gi|293410188|ref|ZP_06653764.1| arginyl-tRNA synthetase [Escherichia coli B354] gi|300822350|ref|ZP_07102491.1| arginyl-tRNA synthetase [Escherichia coli MS 119-7] gi|300928908|ref|ZP_07144413.1| arginyl-tRNA synthetase [Escherichia coli MS 187-1] gi|300935853|ref|ZP_07150811.1| arginyl-tRNA synthetase [Escherichia coli MS 21-1] gi|301029326|ref|ZP_07192423.1| arginyl-tRNA synthetase [Escherichia coli MS 196-1] gi|301645607|ref|ZP_07245536.1| arginyl-tRNA synthetase [Escherichia coli MS 146-1] gi|307138541|ref|ZP_07497897.1| arginyl-tRNA synthetase [Escherichia coli H736] gi|312969919|ref|ZP_07784102.1| arginyl-tRNA synthetase [Escherichia coli 1827-70] gi|331642494|ref|ZP_08343629.1| arginine--tRNA ligase [Escherichia coli H736] gi|331657926|ref|ZP_08358888.1| arginine--tRNA ligase [Escherichia coli TA206] gi|331683384|ref|ZP_08383985.1| arginine--tRNA ligase [Escherichia coli H299] gi|135169|sp|P11875|SYR_ECOLI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|229558757|sp|B1XHE4|SYR_ECODH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|259511643|sp|C4ZQG0|SYR_ECOBW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|581040|emb|CAA33384.1| unnamed protein product [Escherichia coli K-12] gi|1736522|dbj|BAA15686.1| arginyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110] gi|1788184|gb|AAC74946.1| arginyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655] gi|169889367|gb|ACB03074.1| arginyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B] gi|188488834|gb|EDU63937.1| arginyl-tRNA synthetase [Escherichia coli 53638] gi|194417652|gb|EDX33752.1| arginyl-tRNA synthetase [Shigella dysenteriae 1012] gi|209767328|gb|ACI81976.1| arginine tRNA synthetase [Escherichia coli] gi|209767334|gb|ACI81979.1| arginine tRNA synthetase [Escherichia coli] gi|238860014|gb|ACR62012.1| arginyl-tRNA synthetase [Escherichia coli BW2952] gi|242377597|emb|CAQ32353.1| arginyl-tRNA synthetase [Escherichia coli BL21(DE3)] gi|253324211|gb|ACT28813.1| arginyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973837|gb|ACT39508.1| arginyl-tRNA synthetase [Escherichia coli B str. REL606] gi|253978031|gb|ACT43701.1| arginyl-tRNA synthetase [Escherichia coli BL21(DE3)] gi|260449001|gb|ACX39423.1| arginyl-tRNA synthetase [Escherichia coli DH1] gi|290762931|gb|ADD56892.1| Arginyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615] gi|291470656|gb|EFF13140.1| arginyl-tRNA synthetase [Escherichia coli B354] gi|299877752|gb|EFI85963.1| arginyl-tRNA synthetase [Escherichia coli MS 196-1] gi|300458965|gb|EFK22458.1| arginyl-tRNA synthetase [Escherichia coli MS 21-1] gi|300463136|gb|EFK26629.1| arginyl-tRNA synthetase [Escherichia coli MS 187-1] gi|300525233|gb|EFK46302.1| arginyl-tRNA synthetase [Escherichia coli MS 119-7] gi|301076139|gb|EFK90945.1| arginyl-tRNA synthetase [Escherichia coli MS 146-1] gi|309702099|emb|CBJ01414.1| arginyl-tRNA synthetase [Escherichia coli ETEC H10407] gi|310338204|gb|EFQ03293.1| arginyl-tRNA synthetase [Escherichia coli 1827-70] gi|315136519|dbj|BAJ43678.1| arginyl-tRNA synthetase [Escherichia coli DH1] gi|315617901|gb|EFU98499.1| arginyl-tRNA synthetase [Escherichia coli 3431] gi|320177757|gb|EFW52745.1| Arginyl-tRNA synthetase [Shigella boydii ATCC 9905] gi|320647090|gb|EFX15923.1| arginyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89] gi|320652373|gb|EFX20671.1| arginyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687] gi|320657974|gb|EFX25736.1| arginyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320658547|gb|EFX26241.1| arginyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905] gi|320668445|gb|EFX35272.1| arginyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61] gi|323937134|gb|EGB33414.1| arginyl-tRNA synthetase [Escherichia coli E1520] gi|323940456|gb|EGB36647.1| arginyl-tRNA synthetase [Escherichia coli E482] gi|323961931|gb|EGB57530.1| arginyl-tRNA synthetase [Escherichia coli H489] gi|324007268|gb|EGB76487.1| arginyl-tRNA synthetase [Escherichia coli MS 57-2] gi|331039292|gb|EGI11512.1| arginine--tRNA ligase [Escherichia coli H736] gi|331056174|gb|EGI28183.1| arginine--tRNA ligase [Escherichia coli TA206] gi|331079599|gb|EGI50796.1| arginine--tRNA ligase [Escherichia coli H299] gi|332095145|gb|EGJ00176.1| arginyl-tRNA synthetase [Shigella dysenteriae 155-74] Length = 577 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 145/584 (24%), Positives = 250/584 (42%), Gaps = 84/584 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G K T V +++ + N MHVGH R ++GD + F G++V Sbjct: 97 QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + W +Q N +DL EG+Y A K+ Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276 E F E +VK +Q+ + R+ + L DI ++++ + R + + RD Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333 + + + GI+ K+K + + ++F G+ + + K DG Y Y Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389 D+A K +YE D ++Y + S ++ + A+ A V E + + + Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422 L +DG P K RAG + L ++DE VG +V Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-LFP 481 ++ L + + FD+ + + N Y+QYAY R S+FR+A ++D + L Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EIDEEQLAA 483 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 484 APVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH--- 536 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 ---CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|300951499|ref|ZP_07165334.1| arginyl-tRNA synthetase [Escherichia coli MS 116-1] gi|300956611|ref|ZP_07168890.1| arginyl-tRNA synthetase [Escherichia coli MS 175-1] gi|300316593|gb|EFJ66377.1| arginyl-tRNA synthetase [Escherichia coli MS 175-1] gi|300449249|gb|EFK12869.1| arginyl-tRNA synthetase [Escherichia coli MS 116-1] Length = 577 Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 145/584 (24%), Positives = 250/584 (42%), Gaps = 84/584 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G K T V +++ + N MHVGH R ++GD + F G++V Sbjct: 97 QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + W +Q N +DL EG+Y A K+ Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276 E F E +VK +Q+ + R+ + L DI ++++ + R + + RD Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333 + + + GI+ K+K + + ++F G+ + + K DG Y Y Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389 D+A K +YE D ++Y + S ++ + A+ A V E + + + Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422 L +DG P K RAG + L ++DE VG +V Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-LFP 481 ++ L + + FD+ + + N Y+QYAY R S+FR+A ++D + L Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EIDEEQLAA 483 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 484 APVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH--- 536 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 ---CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|291533470|emb|CBL06583.1| Arginyl-tRNA synthetase [Megamonas hypermegale ART12/1] Length = 166 Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 66/157 (42%), Positives = 94/157 (59%), Gaps = 1/157 (0%) Query: 83 IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 IAG GFIN YL + L++++ +G EYG + ++ +E+VSANPTGP+HVGH R Sbjct: 9 IAGPGFINFYLKSDVIYDTLANLLKAGSEYGNLPKQETPRIQVEYVSANPTGPLHVGHGR 68 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202 A G L +LM +GY V+ EYYINDAG QI+ LALSV RY + L + + PE Y Sbjct: 69 GAAFGSALVNLMRAAGYNVSSEYYINDAGKQIDNLALSVNARYLE-LLGKEVEFPENGYH 127 Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 G + K + K + LN +E+ L I K+ +++ Sbjct: 128 GQDIIETAKRIIAKDGDKYLNMSDEERLSIFKELALK 164 >gi|288906386|ref|YP_003431608.1| arginyl-tRNA synthetase [Streptococcus gallolyticus UCN34] gi|306832433|ref|ZP_07465586.1| arginine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325979400|ref|YP_004289116.1| Arginyl-tRNA synthetase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288733112|emb|CBI14693.1| arginyl-tRNA synthetase [Streptococcus gallolyticus UCN34] gi|304425473|gb|EFM28592.1| arginine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325179328|emb|CBZ49372.1| Arginyl-tRNA synthetase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 563 Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 155/622 (24%), Positives = 277/622 (44%), Gaps = 110/622 (17%) Query: 8 SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 + R++N + E+D +++I++ ++E P++ G L+ A L++ L P IA Sbjct: 8 AERIQNIVPELD-----QEQIIN--LLEIPKNSDMGDLAF-PAFSLAKILRKAPQMIAAD 59 Query: 68 IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIE 126 + K+D A +IN +L + +L ++ +G +Y +G+G V I+ Sbjct: 60 VAE--KMDATGFEKIEAVGPYINFFLDKKSISADVLGQVIANGSDYASQDLGEGRNVAID 117 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRY 185 S N P +GH R V+GD+LA++ GY+ + ++ D G Q L ++ W Sbjct: 118 MSSPNIAKPFSIGHLRSTVIGDSLANIFEKLGYKAVKINHLGDWGKQFGMLIVAYKKWGD 177 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAMMK 243 ++A+ + D LK + A+ + L+ +W ++ D ++ + Sbjct: 178 EEAVKAHPID--------ELLKLYVRINAEAETQPELDEEAREWFRKLEAGDEEAISLWQ 229 Query: 244 IIRDD-LKALNIQHD-IFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKT 298 RD+ L N +D + +S D F+ G+ + +++D L +G + E S+ Sbjct: 230 WFRDESLVEFNRLYDELGVSFDSFN-GEAFYNDKMDEVVDILTEKGLLEE-------SQG 281 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMI 353 Q ++++ ++ P L KSDG+ Y DLA Y K Y+ F I Sbjct: 282 AQVVNLEKY-----------GIEHPALIKKSDGATLYITRDLAAALYRKRTYD--FAKAI 328 Query: 354 YVMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412 YV+G++ S + K+L+AV + E I + LV ++G K+S R G+ I L Sbjct: 329 YVVGNEQSAHFKQLKAVLNEMGFEWNEDITHVPFGLVT--KEGK--KLSTRKGNVILLEP 384 Query: 413 VVDE-------------------------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQS 446 + E VG +++F L DFD V + Sbjct: 385 TIAEAVKRAEDQINAKNPNLADKEAVAHAVGVGAIKFYDLKTDRLNGYDFDLDAMVSFEG 444 Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 + P YVQYA+AR +SI R+A+ F +V S D +++ + ++P Sbjct: 445 ETGP--YVQYAHARIQSILRKAE----------FTPSVNQVYSLDDAESWEIVKLIQDFP 492 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLV 563 R+I+ A EP +A + +LA F+ +++H R E+P RL L Sbjct: 493 RIIKRAADNFEPSIVAKFAINLAQSFNKYYAHTRILDESPERD-----------SRLALS 541 Query: 564 HAVASIINSGLNIIGVESPNEM 585 +A A+++ L ++GVE+PNEM Sbjct: 542 YATATVLKEALRLLGVEAPNEM 563 >gi|34497417|ref|NP_901632.1| arginyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472] gi|39932057|sp|Q7NWM1|SYR_CHRVO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|34103272|gb|AAQ59634.1| arginyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472] Length = 572 Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 146/597 (24%), Positives = 254/597 (42%), Gaps = 114/597 (19%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ L +P +AE +VA + + D V IAG GFIN++L+P YL + Sbjct: 36 GDYQANGVMGAAKALKTNPRALAEKVVAALDLAGIADKVEIAGPGFINIHLAPEYLAR-R 94 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 S + + G + K +V +E+ S N MHVGH R +++GD LA +M + G++V Sbjct: 95 SEAALKDDKLGIAPV-KPLRVMVEYSSPNLAKEMHVGHLRSSIIGDALARVMEYVGHDVV 153 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP----EGYYPGVYLKHVGKE----LA 214 R ++ D G Q L + + + D+DL E +Y ++ E A Sbjct: 154 RANHVGDWGTQFGMLVAYLV----ETRHAGDADLQLSDLETFYRNAKIRFDESEDFANTA 209 Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI--QHDIFISEDDFHRGDPSP 272 Y +L EE L + + + V +K D + LN+ + + E ++ D P Sbjct: 210 RDYVVKLQGGDEE-VLKLWRQF-VDVSLKHCEDVYEKLNVGLKREHVRGESSYN--DDLP 265 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL----LKSD 328 + I+ L +G + E D Q++F + D+P+ K D Sbjct: 266 V--IVQELREKGLLTED---------------DGAQVVFLDEFRTQE-DKPMGVIVQKKD 307 Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387 G + Y D+ + ++ E D +IYV+ + S + ++ + +KA + Sbjct: 308 GGFIYTTTDIGAVRYRHRELKLDRVIYVVDARQSQHFAQMFTIC-----RKAGFAPEAMK 362 Query: 388 L------VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD----- 436 L V + DG P K R+G + L +++E ++ + ++ KN +L D Sbjct: 363 LEHVGFGVMMGDDGKPFKT--RSGGTVKLIELLNE--AEERAYALVSEKNPDLSDAQKRE 418 Query: 437 ------FDFCKVKEQSKE-----------------NPVFYVQYAYARCRSIFRQAKDIFP 473 K + SK N Y+QYAY R +S+FR+A+ Sbjct: 419 IANAVGIGAVKYADLSKNRMSDYIFNWDTMLAFEGNTAPYLQYAYTRVQSVFRKAE---- 474 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 D+D R VI + +E QL LA++ + + P+ L+ YLY +A++F Sbjct: 475 --DYDANARIVITE-----PAEKQLAAALAQFEDTLNSVVEGCYPHYLSLYLYQIATLFS 527 Query: 534 GHWSHGRENPRLRFVQA-----NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 RF +A + ++ RLQL A + +GL+++G++ M Sbjct: 528 ------------RFYEACPILKSEGEVRASRLQLAALTAKTLRTGLDLLGIKVLESM 572 >gi|323968298|gb|EGB63705.1| arginyl-tRNA synthetase [Escherichia coli M863] gi|327253005|gb|EGE64659.1| arginyl-tRNA synthetase [Escherichia coli STEC_7v] Length = 577 Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 145/584 (24%), Positives = 250/584 (42%), Gaps = 84/584 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G K T V +++ + N MHVGH R ++GD + F G++V Sbjct: 97 QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDATVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + W +Q N +DL EG+Y A K+ Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276 E F E +VK +Q+ + R+ + L DI ++++ + R + + RD Sbjct: 201 DEDEAFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333 + + + GI+ K+K + + ++F G+ + + K DG Y Y Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389 D+A K +YE D ++Y + S ++ + A+ A V E + + + Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422 L +DG P K RAG + L ++DE VG +V Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-LFP 481 ++ L + + FD+ + + N Y+QYAY R S+FR+A ++D + L Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EIDEEQLAA 483 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 484 APVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH--- 536 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 ---CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|323977939|gb|EGB73025.1| arginyl-tRNA synthetase [Escherichia coli TW10509] Length = 577 Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 145/584 (24%), Positives = 250/584 (42%), Gaps = 84/584 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G K T V +++ + N MHVGH R ++GD + F G++V Sbjct: 97 QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + W +Q N +DL EG+Y A K+ Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276 E F E +VK +Q+ + R+ + L DI ++++ + R + + RD Sbjct: 201 DEDEAFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333 + + + GI+ K+K + + ++F G+ + + K DG Y Y Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389 D+A K +YE D ++Y + S ++ + A+ A V E + + + Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422 L +DG P K RAG + L ++DE VG +V Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-LFP 481 ++ L + + FD+ + + N Y+QYAY R S+FR+A ++D + L Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EIDEEQLAA 483 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 484 APVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH--- 536 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 ---CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|213969436|ref|ZP_03397573.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1] gi|301382647|ref|ZP_07231065.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13] gi|302060631|ref|ZP_07252172.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40] gi|302132698|ref|ZP_07258688.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213925807|gb|EEB59365.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1] Length = 578 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 140/601 (23%), Positives = 252/601 (41%), Gaps = 99/601 (16%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE ++A + D V V IAG GF+N Sbjct: 30 IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + + L L + ++ + G +V ++ + N MHVGH R ++GD +A Sbjct: 90 FQNTAALASRLDA-ALADPQLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ F G V R+ ++ D G Q L + + + A + SDL E +Y Sbjct: 149 NVLEFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263 A + E F E +VK + A + K +++ H ++ ++ Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLTLWTRFKDISLSHCQQTYERLNVKLTPA 255 Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 D G+ + + +++++L G + E S Q ++ FR+ DD Sbjct: 256 DVM-GESAYNDDLANVVNDLKAAGLLVE-------SNGAQCVFLEE----FRTA---DDT 300 Query: 321 DRPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVA--AAVS 375 P++ K+ G Y Y DLA + + + D +Y + + + +++ VA A Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKADRALYFVDQRQALHFQQVFEVARRAGFV 360 Query: 376 EKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------LR 411 + Q+ + + RDG +K+ +RA + LR Sbjct: 361 HEGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAQERAYTLVKEKNPQVAEAELR 420 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 421 SIAKAVGISAVKYADLSKHRASDYSFNFDQMLS-FEGNTAPYLLYAYTRVAGVFRKL--- 476 Query: 472 FPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 FD +++ PQE E L LA++ + N P+ L YLYDL Sbjct: 477 --GTPFDASKGHIVLEAPQEQE-------LAARLAQFNETLNNVAEKGTPHVLCAYLYDL 527 Query: 529 ASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 A +F + + G ENP + RL+L + GL+++G+E+ Sbjct: 528 AGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLER 577 Query: 585 M 585 M Sbjct: 578 M 578 >gi|330877954|gb|EGH12103.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 578 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 141/602 (23%), Positives = 253/602 (42%), Gaps = 101/602 (16%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE ++A + D V V IAG GF+N Sbjct: 30 IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + + L L + ++ + G +V ++ + N MHVGH R ++GD +A Sbjct: 90 FQNTAALASRLDA-ALADPQLSVRKAGTAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ F G V R+ ++ D G Q L + + + A + SDL E +Y Sbjct: 149 NVLEFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263 A + E F E +VK + A + K +++ H ++ ++ Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLTLWTRFKDISLSHCQQTYERLNVKLTPA 255 Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 D G+ + + +++++L G + E S Q ++ FR+ DD Sbjct: 256 DVM-GESAYNDDLANVVNDLKATGLLVE-------SNGAQCVFLEE----FRT---ADDT 300 Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374 P++ K+ G Y Y DLA ++ K + D +Y + + + +++ VA A Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKA-DRALYFVDQRQALHFQQVFEVARRAGF 359 Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410 + Q+ + + RDG +K+ +RA + L Sbjct: 360 VHEGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEAEL 419 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKL-- 476 Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 FD +++ PQE E L LA++ + N P+ L YLYD Sbjct: 477 ---GTPFDASKGHIVLEAPQEQE-------LAARLAQFNETLNNVAEKGTPHVLCAYLYD 526 Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 LA +F + + G ENP + RL+L + GL+++G+E+ Sbjct: 527 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 576 Query: 584 EM 585 M Sbjct: 577 RM 578 >gi|293364384|ref|ZP_06611110.1| arginine-tRNA ligase [Streptococcus oralis ATCC 35037] gi|307702651|ref|ZP_07639603.1| arginyl-tRNA synthetase [Streptococcus oralis ATCC 35037] gi|291317230|gb|EFE57657.1| arginine-tRNA ligase [Streptococcus oralis ATCC 35037] gi|307623767|gb|EFO02752.1| arginyl-tRNA synthetase [Streptococcus oralis ATCC 35037] Length = 563 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 146/595 (24%), Positives = 253/595 (42%), Gaps = 99/595 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G ++ A L++ P IA I KI+ +A ++N + Sbjct: 26 LLETPKNSEMGDIAF-PAFSLAKVERKAPQMIAADIAE--KINSQAFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + ++L ++ Y IGK + I+ S N P +GH R V+GD+L+ Sbjct: 83 LDKSAISAQVLQDVITEKEHYADQTIGKQENIVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + GY+ + ++ D G Q L ++ W ++A+ + D LK Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGNEEAVKAHPID--------ELLKLYV 194 Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267 + A+ L+ +W ++ D A+ + RD+ L N ++ E D + Sbjct: 195 RINAEAEKDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELQVEFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + ++D LA +G + E S+ Q ++++ ++ P Sbjct: 255 GEAFYNDKMDAVVDILAEKGLLVE-------SEGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L KSDG+ Y DLA Y K +Y+ F IYV+G + S + K+L+AV + + Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 Q +++ + ++G K+S R G+ I L + E Sbjct: 355 Q-DIVHVPFGLVTKEGK--KLSTRKGNVILLEPTIAEAVSRAKAQIEAKNPELENKDQVA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +++F L + DFD V + + P YVQYAYAR +SI R+A D P Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKA-DFKP 468 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 D + S D ++I L ++PR+I A EP +A + LA F+ Sbjct: 469 DAAGNY---------SLNDAESWEIIKLLQDFPRIINRAADNFEPSIIAKFAISLAQAFN 519 Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R E+P RL L +A A ++ L ++GVE+P +M Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563 >gi|218440177|ref|YP_002378506.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 7424] gi|226701373|sp|B7KCT7|SYR_CYAP7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|218172905|gb|ACK71638.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 7424] Length = 585 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 156/584 (26%), Positives = 246/584 (42%), Gaps = 91/584 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G +N A+ L++PL P TIAE I+ + I + IAG GFINL L ++L +L Sbjct: 40 GDYQSNVALSLAKPLKQPPRTIAEQIIKALDISDLCEPPQIAGAGFINLTLKANFLENLL 99 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + I G +V ++F S N MHVGH R ++GD +A ++ F G++V Sbjct: 100 AKIQKDS-RLGVEKASPSARVIVDFSSPNIAKEMHVGHLRSTILGDCIARVLEFRGHDVL 158 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222 R ++ D G Q L + Y +AL D+ L G Y K A E Sbjct: 159 RLNHVGDWGTQFGMLIAYLREVYPEALTTADA-LNLGDLVAFYKK------AKVRFDEDE 211 Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLA 281 F E +VK +QA K R + L D R + I +I+D NL Sbjct: 212 TFKETARKEVVK---LQAGAKDTRHAWQLLC----------DQSRREFQVIYNILDVNLT 258 Query: 282 RQG-YVYEGILPPPKSKTTQKC----DMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYF 334 +G Y +LP + ++ D K + + PL+ KSD Y Y Sbjct: 259 ERGESFYNPLLPEIVGQLDEEGLLTEDQGAKCVFLEGFTNKEGNPLPLIVQKSDEGYNYA 318 Query: 335 AADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY- 392 DLA K + E + +IYV + + + ++ VA KKA I E+V + Sbjct: 319 TTDLAALKYRIKEDKAERIIYVTDAGQANHFAQVFQVA-----KKAGIIPENIEVVHVAF 373 Query: 393 -----RDGMPIKMSKRAGDFITLRHVVDE------------------------------- 416 DG K+ R+GD I L+ ++DE Sbjct: 374 GVVKGEDGK--KLKTRSGDTIKLKDLIDEAVAYARRDLEKRLAEDDRKESKDFINHVSQV 431 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQS-KENPVFYVQYAYARCRSIFRQAKDIFPDL 475 VG ++++ L + + D+ F K + + N Y+ YAYAR +SI R+ F L Sbjct: 432 VGISAIKYADL--SQNRISDYVFSYDKMLALQGNTAPYMLYAYARIQSISREGNIDFEKL 489 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 D + ++ +E +EL L +L ++ VIE+ I P +L YLY+L+ F+ Sbjct: 490 DEK--AKVILSEE-----TELALGKYLLQFTEVIEDVEINLLPNRLCEYLYELSKKFNKF 542 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 + + P L+ + + RL L A + GL+++G+ Sbjct: 543 YENC---PVLK----SEDPIKTSRLILCDLTARTLKLGLSLLGI 579 >gi|126459062|ref|YP_001055340.1| arginyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548] gi|126248783|gb|ABO07874.1| arginyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548] Length = 629 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 137/571 (23%), Positives = 244/571 (42%), Gaps = 116/571 (20%) Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + ++ G YG ++ G+ + +E SANP P+H+GH R A++GD+LA L+ F G + Sbjct: 89 VFDAVAEMGRRYGSDVCPGGSFL-VEHTSANPVHPLHIGHGRNAILGDSLARLLKFCGAK 147 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV---YLKHVGKELAD-- 215 V +Y++D G Q+ A+ Y+ + G P + Y+ +A+ Sbjct: 148 VETHFYVDDCGVQVMYAAIG----YRAVRKEAAEAVARGAKPDLVVGYIYSATNAVAEIN 203 Query: 216 KYSSELLNFPEEK-----------WLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFIS 261 + EL EE+ W+ ++K D + K++ + L ++ + Sbjct: 204 RLKKELTAAGEEEKKREIIAQIDEWVAVLKRLMDVEGGLVNKVV-EVLGQRDVAQEAVEL 262 Query: 262 EDDFHRGDPSP---IRDIID--------NLARQGY------------VYEG----ILPPP 294 + GD +R+++D LAR G V+ G I+ Sbjct: 263 NRRYEAGDAEAREAVREVVDLVLRGQRETLARLGIEIDYWDYESDISVWSGEAMRIVREL 322 Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDD------VDRP-------LLKSDGSYTYFAADLAYF 341 + + Q + ++FR+ +D +D P L +SDG+ Y D+AY Sbjct: 323 QRRWPQYVENKGGAVVFRADKFAEDFKLHEVLDLPKFIPPVTLTRSDGTTLYVTRDVAYA 382 Query: 342 KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL--LCELVRLYRDGMPIK 399 +++RG +I V+ ++ + + + A+ + A NV+ E+V L K Sbjct: 383 LWQWKRGLGKVIRVVSTEQTHEQAHVRIILYALGHEDAAKNVVHYAYEMVNL----PGAK 438 Query: 400 MSKRAGDFITLRHVVDE-----------------------VGSDSVRFMMLWRKNSELLD 436 MS R G +I+L ++DE VG SVR+ L + ++ Sbjct: 439 MSARRGQYISLDEILDEAAERSAALVKEANPEVAGVIAERVGVGSVRYAFLSTGPRKPIE 498 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFR--QAKDIFPDLDFDLFPRNVIPQESEFDTS 494 F + V ++N ++QY Y R SI QA P++ P ++P+E Sbjct: 499 FKWDAVLNM-RQNSGPFLQYTYVRAYSILEKAQAPPARPEI-----PGEMLPEEK----- 547 Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554 L+V +AE+P V++ A A P +A YL LA VF+ ++ P L+ Sbjct: 548 --TLVVKVAEWPTVVKEAFQALRPDYVAEYLDGLALVFNSYYEKA---PVLK----AEEP 598 Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L RL LV+AV +++ +G I+G+ + +M Sbjct: 599 LRGFRLALVNAVKTVLEAGFYILGIPTLTKM 629 >gi|333002986|gb|EGK22540.1| arginyl-tRNA synthetase [Shigella flexneri VA-6] gi|333004491|gb|EGK24020.1| arginyl-tRNA synthetase [Shigella flexneri K-272] gi|333017865|gb|EGK37171.1| arginyl-tRNA synthetase [Shigella flexneri K-227] Length = 577 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 145/583 (24%), Positives = 249/583 (42%), Gaps = 82/583 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G K T V +++ + N MHVGH R ++GD + F G++V Sbjct: 97 QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + W +Q N +DL EG+Y A K+ Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276 E F E +VK +Q+ + R+ + L DI ++++ + R + + RD Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333 + + + GI+ K+K + + ++F G+ + + K DG Y Y Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389 D+A K +YE D ++Y + S ++ + A+ A V E + + + Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422 L +DG P K RAG + L ++DE VG +V Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 ++ L + + FD+ + + N Y+QYAY R S+FR+A +I + L Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLAAA 484 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 485 PVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH---- 536 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 --CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|331647473|ref|ZP_08348565.1| arginine--tRNA ligase [Escherichia coli M605] gi|330911686|gb|EGH40196.1| arginyl-tRNA synthetase [Escherichia coli AA86] gi|331043197|gb|EGI15335.1| arginine--tRNA ligase [Escherichia coli M605] Length = 577 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 145/583 (24%), Positives = 249/583 (42%), Gaps = 82/583 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G K T V +++ + N MHVGH R ++GD + F G++V Sbjct: 97 QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + W +Q N +DL EG+Y A K+ Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276 E F E +VK +Q+ + R+ + L DI ++++ + R + + RD Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333 + + + GI+ K+K + + ++F G+ + + K DG Y Y Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389 D+A K +YE D ++Y + S ++ + A+ A V E + + + Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422 L +DG P K RAG + L ++DE VG +V Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 ++ L + + FD+ + + N Y+QYAY R S+FR+A +I + L Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLAAA 484 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 485 PVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH---- 536 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 --CPILNAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|170683284|ref|YP_001743368.1| arginyl-tRNA synthetase [Escherichia coli SMS-3-5] gi|218699552|ref|YP_002407181.1| arginyl-tRNA synthetase [Escherichia coli IAI39] gi|218705377|ref|YP_002412896.1| arginyl-tRNA synthetase [Escherichia coli UMN026] gi|293405370|ref|ZP_06649362.1| arginyl-tRNA synthetase [Escherichia coli FVEC1412] gi|298381013|ref|ZP_06990612.1| arginyl-tRNA synthetase [Escherichia coli FVEC1302] gi|300899127|ref|ZP_07117409.1| arginyl-tRNA synthetase [Escherichia coli MS 198-1] gi|301018279|ref|ZP_07182790.1| arginyl-tRNA synthetase [Escherichia coli MS 69-1] gi|331663376|ref|ZP_08364286.1| arginine--tRNA ligase [Escherichia coli TA143] gi|226701377|sp|B7NS42|SYR_ECO7I RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|226701379|sp|B7NBM7|SYR_ECOLU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|226701380|sp|B1LCZ5|SYR_ECOSM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|170521002|gb|ACB19180.1| arginyl-tRNA synthetase [Escherichia coli SMS-3-5] gi|218369538|emb|CAR17307.1| arginyl-tRNA synthetase [Escherichia coli IAI39] gi|218432474|emb|CAR13367.1| arginyl-tRNA synthetase [Escherichia coli UMN026] gi|284921796|emb|CBG34869.1| arginyl-tRNA synthetase [Escherichia coli 042] gi|291427578|gb|EFF00605.1| arginyl-tRNA synthetase [Escherichia coli FVEC1412] gi|298278455|gb|EFI19969.1| arginyl-tRNA synthetase [Escherichia coli FVEC1302] gi|300357245|gb|EFJ73115.1| arginyl-tRNA synthetase [Escherichia coli MS 198-1] gi|300399749|gb|EFJ83287.1| arginyl-tRNA synthetase [Escherichia coli MS 69-1] gi|331059175|gb|EGI31152.1| arginine--tRNA ligase [Escherichia coli TA143] Length = 577 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 145/584 (24%), Positives = 249/584 (42%), Gaps = 84/584 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLADHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G K T V +++ + N MHVGH R ++GD + F G++V Sbjct: 97 QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + W +Q N +DL EG+Y A K+ Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276 E F E +VK +Q+ + R+ + L DI ++++ + R + + RD Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333 + + + GI+ K+K + + ++F G+ + + K DG Y Y Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389 D+A K +YE D ++Y + S ++ + A+ A V E + + + Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422 L +DG P K RAG + L ++DE VG +V Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-LFP 481 ++ L + + FD+ + + N Y+QYAY R S+FR+A ++D + L Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EIDEEQLAA 483 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 484 APVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH--- 536 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 ---CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|218695442|ref|YP_002403109.1| arginyl-tRNA synthetase [Escherichia coli 55989] gi|254782962|sp|B7L7S9|SYR_ECO55 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|218352174|emb|CAU97913.1| arginyl-tRNA synthetase [Escherichia coli 55989] Length = 577 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 145/583 (24%), Positives = 249/583 (42%), Gaps = 82/583 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G K T V +++ + N MHVGH R ++GD + F G++V Sbjct: 97 QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + W +Q N +DL EG+Y A K+ Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276 E F E +VK +Q+ + R+ + L DI ++++ + R + + RD Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333 + + + GI+ K+K + + ++F G+ + + K DG Y Y Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389 D+A K +YE D ++Y + S ++ + A+ A V E + + + Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422 L +DG P K RAG + L ++DE VG +V Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANSVGIGAV 429 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 ++ L + + FD+ + + N Y+QYAY R S+FR+A +I + L Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLAAA 484 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 485 PVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH---- 536 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 --CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|26248143|ref|NP_754183.1| arginyl-tRNA synthetase [Escherichia coli CFT073] gi|170019779|ref|YP_001724733.1| arginyl-tRNA synthetase [Escherichia coli ATCC 8739] gi|194439027|ref|ZP_03071110.1| arginyl-tRNA synthetase [Escherichia coli 101-1] gi|209919302|ref|YP_002293386.1| arginyl-tRNA synthetase [Escherichia coli SE11] gi|227885696|ref|ZP_04003501.1| arginyl-tRNA synthetase [Escherichia coli 83972] gi|293446263|ref|ZP_06662685.1| arginyl-tRNA synthetase [Escherichia coli B088] gi|300994045|ref|ZP_07180664.1| arginyl-tRNA synthetase [Escherichia coli MS 45-1] gi|301050768|ref|ZP_07197626.1| arginyl-tRNA synthetase [Escherichia coli MS 185-1] gi|306814294|ref|ZP_07448460.1| arginyl-tRNA synthetase [Escherichia coli NC101] gi|312967079|ref|ZP_07781297.1| arginyl-tRNA synthetase [Escherichia coli 2362-75] gi|331668572|ref|ZP_08369420.1| arginine--tRNA ligase [Escherichia coli TA271] gi|331677761|ref|ZP_08378436.1| arginine--tRNA ligase [Escherichia coli H591] gi|29427485|sp|Q8FGQ0|SYR_ECOL6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|189083533|sp|B1J0L2|SYR_ECOLC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|238065088|sp|B6I0S7|SYR_ECOSE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|26108547|gb|AAN80750.1|AE016762_3 Arginyl-tRNA synthetase [Escherichia coli CFT073] gi|169754707|gb|ACA77406.1| arginyl-tRNA synthetase [Escherichia coli ATCC 8739] gi|194421986|gb|EDX37990.1| arginyl-tRNA synthetase [Escherichia coli 101-1] gi|209912561|dbj|BAG77635.1| arginyl-tRNA synthase [Escherichia coli SE11] gi|222033625|emb|CAP76366.1| Arginyl-tRNA synthetase [Escherichia coli LF82] gi|227837269|gb|EEJ47735.1| arginyl-tRNA synthetase [Escherichia coli 83972] gi|281178946|dbj|BAI55276.1| arginyl-tRNA synthetase [Escherichia coli SE15] gi|291323093|gb|EFE62521.1| arginyl-tRNA synthetase [Escherichia coli B088] gi|300297585|gb|EFJ53970.1| arginyl-tRNA synthetase [Escherichia coli MS 185-1] gi|300406413|gb|EFJ89951.1| arginyl-tRNA synthetase [Escherichia coli MS 45-1] gi|305852453|gb|EFM52904.1| arginyl-tRNA synthetase [Escherichia coli NC101] gi|307553895|gb|ADN46670.1| arginine tRNA synthetase [Escherichia coli ABU 83972] gi|312288543|gb|EFR16445.1| arginyl-tRNA synthetase [Escherichia coli 2362-75] gi|312946476|gb|ADR27303.1| arginyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C] gi|315290304|gb|EFU49680.1| arginyl-tRNA synthetase [Escherichia coli MS 153-1] gi|323186348|gb|EFZ71698.1| arginyl-tRNA synthetase [Escherichia coli 1357] gi|323186757|gb|EFZ72077.1| arginyl-tRNA synthetase [Escherichia coli RN587/1] gi|323972615|gb|EGB67818.1| arginyl-tRNA synthetase [Escherichia coli TA007] gi|324017993|gb|EGB87212.1| arginyl-tRNA synthetase [Escherichia coli MS 117-3] gi|331063766|gb|EGI35677.1| arginine--tRNA ligase [Escherichia coli TA271] gi|331074221|gb|EGI45541.1| arginine--tRNA ligase [Escherichia coli H591] gi|332343602|gb|AEE56936.1| arginyl-tRNA synthetase ArgS [Escherichia coli UMNK88] Length = 577 Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 145/583 (24%), Positives = 249/583 (42%), Gaps = 82/583 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G K T V +++ + N MHVGH R ++GD + F G++V Sbjct: 97 QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + W +Q N +DL EG+Y A K+ Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276 E F E +VK +Q+ + R+ + L DI ++++ + R + + RD Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333 + + + GI+ K+K + + ++F G+ + + K DG Y Y Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389 D+A K +YE D ++Y + S ++ + A+ A V E + + + Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422 L +DG P K RAG + L ++DE VG +V Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 ++ L + + FD+ + + N Y+QYAY R S+FR+A +I + L Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLAAA 484 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 485 PVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH---- 536 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 --CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|306826025|ref|ZP_07459361.1| arginine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431741|gb|EFM34721.1| arginine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 563 Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 147/595 (24%), Positives = 252/595 (42%), Gaps = 99/595 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G ++ A L++ P IA I KI+ +A ++N + Sbjct: 26 LLETPKNSEMGDIAF-PAFSLAKVERKAPQMIAADIAE--KINSQAFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + ++L ++ Y IGK V I+ S N P +GH R V+GD+L+ Sbjct: 83 LDKSAISAQVLQDVITEKEHYADQTIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + GY+ + ++ D G Q L ++ W ++A+ + D LK Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194 Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267 + A+ L+ +W ++ D A+ + RD+ L N ++ E D + Sbjct: 195 RINAEAEKDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELQVEFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + ++D LA +G + E S+ Q +++ ++ P Sbjct: 255 GEAFYNDKMDAVVDILAEKGLLVE-------SEGAQVVSLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L KSDG+ Y DLA Y K +Y+ F IYV+G + S + K+L+AV + + Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 Q +++ + ++G K+S R G+ I L + E Sbjct: 355 Q-DIVHVPFGLVTKEGK--KLSTRKGNVILLEPTIAEAVSRAKAQIEAKNPELENKDQVA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +++F L + DFD V + + P YVQYAYAR +SI R+A D P Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKA-DFKP 468 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 D + S D ++I L ++PR+I A EP +A + LA F+ Sbjct: 469 DTAGNY---------SLNDAESWEIIKLLQDFPRIISRAADNFEPSIIAKFAISLAQAFN 519 Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R E+P RL L +A A ++ L ++GVE+P +M Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563 >gi|228476699|ref|ZP_04061368.1| arginyl-tRNA synthetase [Streptococcus salivarius SK126] gi|228251648|gb|EEK10745.1| arginyl-tRNA synthetase [Streptococcus salivarius SK126] Length = 563 Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 145/595 (24%), Positives = 252/595 (42%), Gaps = 99/595 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G ++ A L++ L P IA I +I + + V G +IN + Sbjct: 26 LLETPKNADMGDVAF-PAFSLAKVLRKAPQMIAADIAEKIDAS-NFEKVEAVGP-YINFF 82 Query: 93 LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + +L ++ G Y IG G + + S N P +GH R V+ D LA Sbjct: 83 LDKSKISADVLGQVIAQGSHYADQNIGHGRNIAFDMSSPNIAKPFSIGHLRSTVIADALA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +++A GY+ R ++ D G Q L ++ W ++A+ N P +Y++ Sbjct: 143 NIVAKQGYKPVRINHLGDWGKQFGMLIVAYKKWGSEEAVKAN----PINELLQLYVRINA 198 Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267 + D E +W ++ D A+ + RD+ L N +D D + Sbjct: 199 EAEEDPSVDE----EAREWFRKLEAGDEEATALWQWFRDESLVEFNRLYDELGVSFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + +++D L +G + E S+ Q ++++ ++ P Sbjct: 255 GEAFYNDKMDEVVDILTEKGLLQE-------SQGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L KSDG+ Y DLA Y K Y+ F IYV+G++ S + K+L+AV + + Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKAIYVVGNEQSAHFKQLKAVLKEMGYDWS 354 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 ++ + ++G K+S R G+ I L + E Sbjct: 355 D-DMTHVAFGLVTKNGK--KLSTRKGNVILLEPTIAEAVNRAQAQIEAKNPNLPNKEAVA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +++F L DFD V + + P YVQYA+AR +SI R+A Sbjct: 412 HAVGVGAIKFYDLKTDRMNGYDFDLDAMVSFEGETGP--YVQYAHARIQSILRKAN---- 465 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 F + S D ++I + ++PR+I A+ EP +A + LA F+ Sbjct: 466 ------FTPSADATYSLNDVESWEIIKLIQDFPRIINRASDNFEPSIVAKFAISLAQAFN 519 Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R E+P RL L +A A+++ L ++GVE+P+EM Sbjct: 520 KYYAHTRILDESPERD-----------SRLALCYATATVLKEALRLLGVEAPDEM 563 >gi|320194410|gb|EFW69041.1| Arginyl-tRNA synthetase [Escherichia coli WV_060327] Length = 577 Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 145/584 (24%), Positives = 250/584 (42%), Gaps = 84/584 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTYLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G K T V +++ + N MHVGH R ++GD + F G++V Sbjct: 97 QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + W +Q N +DL EG+Y A K+ Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276 E F E +VK +Q+ + R+ + L DI ++++ + R + + RD Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333 + + + GI+ K+K + + ++F G+ + + K DG Y Y Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389 D+A K +YE D ++Y + S ++ + A+ A V E + + + Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422 L +DG P K RAG + L ++DE VG +V Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-LFP 481 ++ L + + FD+ + + N Y+QYAY R S+FR+A ++D + L Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EIDEEQLAA 483 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 484 APVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH--- 536 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 ---CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|331016037|gb|EGH96093.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 578 Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 140/601 (23%), Positives = 252/601 (41%), Gaps = 99/601 (16%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE ++A + D V V IAG GF+N Sbjct: 30 IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + + L L + ++ + G +V ++ + N MHVGH R ++GD +A Sbjct: 90 FQNTAALASRLDA-ALADPQLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ F G V R+ ++ D G Q L + + + A + SDL E +Y Sbjct: 149 NVLEFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263 A + E F E +VK + A + K +++ H ++ ++ Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLTLWTRFKDISLSHCQQTYERLNVKLTPA 255 Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 D G+ + + +++++L G + E S Q ++ FR+ DD Sbjct: 256 DVM-GESAYNDDLANVVNDLKAAGLLVE-------SNGAQCVFLEE----FRTA---DDT 300 Query: 321 DRPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVA--AAVS 375 P++ K+ G Y Y DLA + + + D +Y + + + +++ VA A Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKADRALYFVDQRQALHFQQVFEVARRAGFV 360 Query: 376 EKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------LR 411 + Q+ + + RDG +K+ +RA + LR Sbjct: 361 HEGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAQERAYTLVKEKNPQVAEAELR 420 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 421 SIARAVGISAVKYADLSKHRASDYSFNFDQMLS-FEGNTAPYLLYAYTRVAGVFRKL--- 476 Query: 472 FPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 FD +++ PQE E L LA++ + N P+ L YLYDL Sbjct: 477 --GTPFDASKGHIVLEAPQEQE-------LAARLAQFNETLNNVAEKGTPHVLCAYLYDL 527 Query: 529 ASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 A +F + + G ENP + RL+L + GL+++G+E+ Sbjct: 528 AGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLER 577 Query: 585 M 585 M Sbjct: 578 M 578 >gi|262039672|ref|ZP_06012961.1| arginine--tRNA ligase [Leptotrichia goodfellowii F0264] gi|261746289|gb|EEY33839.1| arginine--tRNA ligase [Leptotrichia goodfellowii F0264] Length = 577 Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 148/602 (24%), Positives = 259/602 (43%), Gaps = 96/602 (15%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 D+I I+ G TN AM+ S+ LG +P IA I+ + + ++ + IAG GFI Sbjct: 26 DKIDIQNSTKKEFGDFQTNFAMVTSKILGKNPREIANEIIENFEKNDIIEKMEIAGPGFI 85 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N+YL S+L I +Y + + V I++ S N MHVGH R ++GD+ Sbjct: 86 NIYLKNSFLDNETKKI--GNEKYDFSFLDSDKTVIIDYSSPNIAKRMHVGHLRSTIIGDS 143 Query: 150 LASLMAFSGYE-VTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYY------ 201 L ++ F G++ V + ++ D G Q L + W ++A + + E Y Sbjct: 144 LKRILQFLGFKKVLGDNHVGDWGTQFGKLIVGYNLWLNREAYEKDPIEELERIYVMFSDE 203 Query: 202 --PGVYLKHVGKELADKYSS--ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257 L+ V +E K S E+ N W + D S++ KI K +I D Sbjct: 204 AKKDPSLEDVAREELRKLQSGDEVNN---ALWREFI-DISIKEYNKI----YKRFDITFD 255 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 + E ++ D P+ +L K K K D D + F G Sbjct: 256 YYNGESFYN--DLMPV----------------VLEELKEKNIAKQDEDALVVFF-----G 292 Query: 318 DDVD-RPLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAA 373 +D P + K DGS+ Y +DLA K + + D IYV+ + K++ ++A Sbjct: 293 EDTKLHPCIVQKKDGSFLYSTSDLATIKYRKDNLDVDLAIYVVDERQQDHFKQVFSIAKM 352 Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL-----------RHVVDE------ 416 + V + + + +G + +S R G+ I L + V+DE Sbjct: 353 IGAPYDYDKVHVWFGIMRFANG--VILSTRGGNVIRLIDLLDEAKKHVKKVIDEKNPDIP 410 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIF 465 VG+ ++++ L + + + FD+ KV + P Y+QY Y R SI Sbjct: 411 EPEKEIIADIVGTGAIKYFDLSQNRTSPILFDWEKVLSFEGNTGP--YLQYTYVRIMSIL 468 Query: 466 R--QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 R ++++I + + ++ N+ E E L V L +P+V+ + + P +A Sbjct: 469 RKMESENISINKNGNIIFDNMQDVERE-------LAVALLRFPQVVVKSYESYRPNVIAD 521 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 YL++LA +F+ ++ P L+ N + R+ L A I+ GL+++G+++ + Sbjct: 522 YLFELAKLFNNFYNS---KPILK---EENAETMQARILLALKTAEILKQGLSLLGIQTVD 575 Query: 584 EM 585 M Sbjct: 576 RM 577 >gi|330964749|gb|EGH65009.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 578 Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 142/602 (23%), Positives = 252/602 (41%), Gaps = 101/602 (16%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE ++A + D V V IAG GF+N Sbjct: 30 IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + + L L + + R G +V ++ + N MHVGH R ++GD +A Sbjct: 90 FQNTAALASRLDAALADPPLSVRK-AGTAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ F G V R+ ++ D G Q L + + + A + SDL E +Y Sbjct: 149 NVLEFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263 A + E F E +VK + A + K +++ H ++ ++ Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLTLWTRFKDISLSHCQQTYERLNVKLTPA 255 Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 D G+ + + +++++L G + E S Q ++ FR+ DD Sbjct: 256 DVM-GESAYNDDLANVVNDLKATGLLVE-------SNGAQCVFLEE----FRT---ADDT 300 Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374 P++ K+ G Y Y DLA ++ K + D +Y + + + +++ VA A Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKA-DRALYFVDQRQALHFQQVFEVARRAGF 359 Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410 + Q+ + + RDG +K+ +RA + L Sbjct: 360 VHEGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEAEL 419 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKL-- 476 Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 FD +++ PQE E L LA++ + N P+ L YLYD Sbjct: 477 ---GTPFDASKGHIVLEAPQEQE-------LAARLAQFNETLNNVAEKGTPHVLCAYLYD 526 Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 LA +F + + G ENP + RL+L + GL+++G+E+ Sbjct: 527 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 576 Query: 584 EM 585 M Sbjct: 577 RM 578 >gi|322375078|ref|ZP_08049592.1| arginine--tRNA ligase [Streptococcus sp. C300] gi|321280578|gb|EFX57617.1| arginine--tRNA ligase [Streptococcus sp. C300] Length = 563 Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 146/595 (24%), Positives = 252/595 (42%), Gaps = 99/595 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G ++ A L++ P IA I KI+ +A ++N + Sbjct: 26 LLETPKNSEMGDIAF-PAFSLAKVERKAPQMIATDIAE--KINSQAFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + ++L ++ Y IGK V I+ S N P +GH R V+GD+L+ Sbjct: 83 LDKSAISAQVLQDVITEKDHYADQTIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + GY+ + ++ D G Q L ++ W ++A+ + D LK Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGNEEAVKAHPID--------ELLKLYV 194 Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267 + A+ L+ +W ++ D A+ + RD+ L N ++ E D + Sbjct: 195 RINAEAEKDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELQVEFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + ++D LA +G + E S+ Q ++++ ++ P Sbjct: 255 GEAFYNDKMDAVVDILAEKGLLVE-------SEGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L KSDG+ Y DLA Y K +Y+ F IYV+G + S + K+L+AV + + Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 Q +++ + ++G K+S R G+ I L + E Sbjct: 355 Q-DIVHVPFGLVTKEGK--KLSTRKGNVILLEPTIAEAVSRAKAQIEAKNPELENKDQVA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +++F L + DFD V + + P YVQYAYAR +SI R+A D P Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKA-DFKP 468 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 D S D ++I + ++PR+I A EP +A + LA F+ Sbjct: 469 D---------TASNYSLNDAESWEIIKLIQDFPRIINRAADNFEPSIIAKFAIGLAQAFN 519 Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R E+P RL L +A A ++ L ++GVE+P +M Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563 >gi|229824015|ref|ZP_04450084.1| hypothetical protein GCWU000282_01319 [Catonella morbi ATCC 51271] gi|229786369|gb|EEP22483.1| hypothetical protein GCWU000282_01319 [Catonella morbi ATCC 51271] Length = 563 Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 147/592 (24%), Positives = 256/592 (43%), Gaps = 94/592 (15%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IE P HG L+ L++ P IA+ + ++ D V G ++N + Sbjct: 27 LIEVPSHAEHGDLAF-PVFQLAKVFRKAPQAIAQEVAEQVDASK-FDKVVAMGP-YVNFF 83 Query: 93 LS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + + + L +++ G YG++ +G+G V I+ S N PM +GH R V+G++++ Sbjct: 84 LKRGAVVNETLHAVLEGGASYGQSDLGQGRNVVIDMSSPNIAKPMSMGHLRSTVIGNSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHV 209 ++A GY+ R ++ D G Q L ++ +A D +L + Y Sbjct: 144 LILAKLGYQPVRVNHLGDWGTQFGKLIVAYQGWGDEATVKADPVKELVKLYVDFHEKAET 203 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHRG 268 EL D+ + + D + A+ + R++ LK +D+ E D + G Sbjct: 204 QPELEDQARAIFKRLED-------GDPEMLALWQWFREESLKEFQKVYDLLEVEFDSYNG 256 Query: 269 DP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 + + +I+D L +G + +D L + D+ P L Sbjct: 257 EAFYNDKMDEIVDLLEEKGLL----------------SVDNGATLVH---LEDETLPPAL 297 Query: 326 --KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 KSDGS Y DLA Y K Y+ F +YVMGS+ S + K+L+ V + + A+ Sbjct: 298 IKKSDGSTLYLTRDLATAYYRKRTYD--FAKNLYVMGSEQSVHFKQLQTVLEMMGNEWAK 355 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416 ++ + +G K+S R G + L V+ E Sbjct: 356 -DMAHVPFGLITLNGK--KLSTRKGKIVLLEEVLKEAISLARQQIELKNPGLENKDQVAR 412 Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQ-AKDIFP 473 VG +V F L + DF+ ++ + + + P YVQY +AR RSI + +++ Sbjct: 413 QVGVGAVVFHDLKTERMNSFDFNLEEIVQFEGETGP--YVQYTHARSRSILSKYGQEVDL 470 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 +FDL D ++ LA+YPR+I A EP +A YL LA +F+ Sbjct: 471 SAEFDLS-----------DDYAWEVAKKLADYPRIIRQAGDRYEPSVVAKYLVQLAQLFN 519 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++ N R+ A T R+ LV AVA ++ GL+++G+ +P++M Sbjct: 520 KYYA----NSRILDQDAG----TASRIALVAAVAQVLKDGLHLLGLHAPDKM 563 >gi|82543644|ref|YP_407591.1| arginyl-tRNA synthetase [Shigella boydii Sb227] gi|109895034|sp|Q322J5|SYR_SHIBS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|81245055|gb|ABB65763.1| arginine tRNA synthetase [Shigella boydii Sb227] gi|332096695|gb|EGJ01686.1| arginyl-tRNA synthetase [Shigella boydii 3594-74] Length = 577 Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 149/586 (25%), Positives = 248/586 (42%), Gaps = 88/586 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G + K T V +++ + N MHVGH R ++GD + F G++V Sbjct: 97 QQALASD-RLGVSTPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGK-----EL 213 R ++ D G Q L + W +Q N +DL EG+Y KH + E Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRDAK-KHYDEDEEFAER 209 Query: 214 ADKYSSELLNFPE---EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 A Y +L + E E W +V Q +I D L + + D + E ++ P Sbjct: 210 ARNYVVKLQSGDEYFREMWHKLVDITMTQN--QITYDRLN-VTLTRDDVMGESLYNPMLP 266 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I+ +L +G E S+ +D F++ G+ + + K DG Sbjct: 267 G----IVADLKAKGLAVE-------SEGATVVFLDE----FKNKE-GEPMGVIIQKKDGG 310 Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLC 386 Y Y D+A K +YE D ++Y + S ++ + A+ A V E + + Sbjct: 311 YLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFG 370 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGS 419 + L +DG P K RAG + L ++DE VG Sbjct: 371 MM--LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGI 426 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 +V++ L + + FD+ + + N Y+QYAY R S+FR+A +I + L Sbjct: 427 GAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QL 481 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 482 AAAPVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH- 536 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 -----CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|126656792|ref|ZP_01728006.1| arginyl-tRNA synthetase [Cyanothece sp. CCY0110] gi|126622012|gb|EAZ92720.1| arginyl-tRNA synthetase [Cyanothece sp. CCY0110] Length = 585 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 149/592 (25%), Positives = 256/592 (43%), Gaps = 89/592 (15%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 + RD HG N A+ L++ LG +P IA++I+ + ++ +S I G GFINL L Sbjct: 31 VTTARDLRHGDYQANIALPLAKKLGKNPREIAQIIINNLSLNNICESPTIGGPGFINLRL 90 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 SYL L+S+ G + KV ++F S N MHVGH R ++GD +A Sbjct: 91 KSSYLESQLTSL-YQNQRLGIKKVENADKVIVDFSSPNIAKEMHVGHLRSTIIGDCIART 149 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + F GY+V R ++ D G Q L + Y AL D+ L G Y + Sbjct: 150 LEFLGYDVLRLNHVGDWGTQFGMLITYLKEVYPDALTKADA-LEIGDLVNFYKQ------ 202 Query: 214 ADKYSSELLNFPEEKWLPIVK-----DYSVQAMMKII---RDDLKALNIQHDIFISEDDF 265 A K E F E +VK S+QA + R + + + + ++ ++E Sbjct: 203 AKKRFDEDPKFQEAARDAVVKLQSGDKESLQAWQLLCDQSRREFQKIYDRLNVQLTE--- 259 Query: 266 HRGDP--SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322 RG+ +P + D+I L +QG + K + Q C L + GD + Sbjct: 260 -RGESFYNPYLDDVIKALDKQGIL-------EKDQGAQ-CVF----LEGFTNKSGDPLPL 306 Query: 323 PLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAV------- 374 + KSDG Y Y DLA + + E +IYV + S + ++ VA Sbjct: 307 IVQKSDGGYNYATTDLAALRYRIKEDKAKRIIYVTDAGQSNHFAQVFQVAEKANFLPDTV 366 Query: 375 ---------------------SEKKAQINVLLCELVRLYRDGMP--IKMSKRAGDFITLR 411 S + ++ LL E V R + ++ +R + Sbjct: 367 EVTHVPFGLVKGEDGKKLKTRSGETVKLKDLLDEAVNYARKDLENRLQSEERQESAAFIN 426 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS-KENPVFYVQYAYARCRSIFRQAKD 470 HV + VG +V++ L + + + D+ F K + + N Y+ YAYAR +SI R+ Sbjct: 427 HVSETVGISAVKYADLSQ--NRISDYIFSYDKMLALQGNTAPYMLYAYARIQSISREG-- 482 Query: 471 IFPDLDFDLFPRNV---IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 ++D++ N+ + +E+E + + ++ L+E + +E + P +L YLY+ Sbjct: 483 ---NIDYENLGENITILLKEETEIELG--KYLLQLSETIKEVEKTLL---PNRLCDYLYE 534 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 L+ F+ + + P L+ ++ + RL L A + GL+++G+ Sbjct: 535 LSKKFNRFYENC---PVLK----SDEPVKTSRLLLCDLTARTLKLGLSLLGI 579 >gi|326334239|ref|ZP_08200462.1| arginine--tRNA ligase [Nocardioidaceae bacterium Broad-1] gi|325948030|gb|EGD40147.1| arginine--tRNA ligase [Nocardioidaceae bacterium Broad-1] Length = 576 Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 137/589 (23%), Positives = 243/589 (41%), Gaps = 98/589 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GHL +N + L+ PLGL P I ++ + + D+ + +AG GF+NL SP+ L + + Sbjct: 40 GHLQSNLPLRLAGPLGLAPREIGTRLLDAVDLG-DLATAELAGAGFLNLTWSPAVLGEAV 98 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 ++ G +V +++ S N MHVGH R V+GD+LA ++ ++G++V Sbjct: 99 GDLLTD-PHLGVPTPETPQRVVVDYSSPNVAKQMHVGHLRSTVIGDSLARVLTYAGHDVV 157 Query: 163 REYYINDAGAQINTLALSVFWR-------------------YQQALYNNDSDLPEGYYPG 203 R+ ++ D G Q L + YQ+A D D G+ Sbjct: 158 RQNHLGDWGTQFGMLVEELLGEDLHDPAAVAGLDMSELLALYQRAKARFDDD--PGFAAS 215 Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 + V + D + L W QA+++ + + + + ++ D Sbjct: 216 ARRRVVALQSGDPTTLAL-------W---------QALVEASLAEFETTYSRLGVLLTRD 259 Query: 264 DF---HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-DD 319 DF R +P + ++D+L G + E Q+++ G D Sbjct: 260 DFDGESRYNPQ-LPGVVDDLRASGLLTESA---------------GAQVVYPDGFAGRDG 303 Query: 320 VDRPLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 PL+ K+DG + Y A DLA + + + D ++YV+ S + + AVA A Sbjct: 304 APLPLIVRKADGGFGYAATDLATIRHRVDDLAVDRVVYVVDHRQSHHFDMVFAVARAAGW 363 Query: 377 KKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDEV-----------------G 418 + V L DG P K R+G+ +TL ++D+ Sbjct: 364 LPDSVEVQHIGFGTVLGADGRPFK--TRSGETVTLTSLLDDAEEAVAARYDNPEVVRAVA 421 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA-KDIFPDLDF 477 + +V++ L + FD ++ + E Y+QYA+AR SI QA + +P Sbjct: 422 NAAVKYADLSNHLARDYAFDLARMSATTGETGP-YLQYAHARVCSILAQAPQQTYPPTGS 480 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 + +E +L + L + V+ EP+ L YLY L++ + Sbjct: 481 GHRAVGTLSHP-----AEQRLALELTGFATVVAKVADTLEPHHLTAYLYGLSTALTAFY- 534 Query: 538 HGREN-PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 EN P L+ + ++ RL L A +++ GL ++G+E+P M Sbjct: 535 ---ENCPVLK----ADGEVRQTRLALCEATRRVLSDGLRLLGIEAPRRM 576 >gi|323339717|ref|ZP_08079987.1| arginine--tRNA ligase [Lactobacillus ruminis ATCC 25644] gi|323092796|gb|EFZ35398.1| arginine--tRNA ligase [Lactobacillus ruminis ATCC 25644] Length = 565 Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 149/597 (24%), Positives = 261/597 (43%), Gaps = 105/597 (17%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 IE P+ G + A +L++ L P IA+ +V KID A ++N +L Sbjct: 29 IETPKSLNLGDYAF-PAFVLAKVLRKAPQMIAQDLVE--KIDHAGFEKIEAVGPYVNFFL 85 Query: 94 SPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 + +L ++ G +G GKG V I+ S N PM +GH R V+G+++A Sbjct: 86 DKKDFSADVLGDVISKGASFGDADEGKGGNVPIDMSSPNIAKPMSMGHLRSTVIGNSIAQ 145 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 L+ +GY+ + ++ D G Q L + W ++ + D YY + + V Sbjct: 146 LLEKTGYKPVKINHLGDWGTQFGKLMCAYKLWGSEEEVKKAPIDSLLRYYVRFHEEDVDH 205 Query: 212 ELADKYSSELLNFPEE---------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262 D+ + E E+ KW ++ S++ M++ L+I+ D + E Sbjct: 206 PELDEEAREWFKRLEDGDEEATKLWKWF---REESLKVFMRV----YDRLDIKFDSYNGE 258 Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322 ++ + ++++ L + ++E S+ Q D+ + L Sbjct: 259 AFYN----DKMDEVVEMLEAKNLLHE-------SQGAQIVDLSKYDL------------N 295 Query: 323 PLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 P L K+DG+ Y DLA Y K YE F +YV+G++ + K+L+AV + Sbjct: 296 PALIKKTDGATLYITRDLAAAIYRKRTYE--FAQSLYVVGNEQKNHFKQLKAVLKEMGYD 353 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416 + ++ + +DG K+S R+G + L V+D+ Sbjct: 354 WSD-DIHHIPFGLITKDGK--KLSTRSGRIVLLEEVLDDAVKLAQKQIEEKNPALENKAE 410 Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAK 469 VG +V F L KN L +FDF V+ + + P YVQY++AR SI R+A Sbjct: 411 VAEAVGVGAVVFHDL--KNDRLNNFDFNLEEVVRFEGETGP--YVQYSHARAMSILRKAG 466 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSE-LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 + P+LD + D SE + + LA++P + A EP +A Y L Sbjct: 467 N--PELD--------AAGKYRLDDSEAWETLRLLADFPATVLKAVEEYEPSVIAKYGIHL 516 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A F+ +++H R ++ +++K RL LV +VA ++ L ++GV++P+EM Sbjct: 517 AKAFNRYYAHS------RILEDDDQKEA--RLALVKSVAEVLKESLRLLGVKAPDEM 565 >gi|306826468|ref|ZP_07459779.1| arginine--tRNA ligase [Streptococcus pyogenes ATCC 10782] gi|304431327|gb|EFM34325.1| arginine--tRNA ligase [Streptococcus pyogenes ATCC 10782] Length = 563 Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 139/590 (23%), Positives = 257/590 (43%), Gaps = 89/590 (15%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G L+ A L++ L P IA + +I + + V G +IN + Sbjct: 26 LLETPKNSDMGDLAF-PAFSLAKVLRKAPQMIASELAEQID-ESQFEKVVAVGP-YINFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + + ++L ++ +G +Y + G+G V I+ S N P +GH R V+GD+LA Sbjct: 83 LDKAKISSQVLEQVITAGSDYAQQDEGQGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ A GY+ + ++ D G Q L ++ W + A+ + D Y + + Sbjct: 143 NIFAKMGYQPVKINHLGDWGKQFGMLIVAYKKWGDEAAVQAHPIDELLKLYVRINAEAET 202 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 D+ + E W ++D +A + + RD+ L N +D D + Sbjct: 203 DPTVDEEARE--------WFRKLEDGDKEATELWQWFRDESLLEFNRLYDQLHVTFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + +++D L + + E SK Q ++++ ++ P Sbjct: 255 GEAFYNDKMDEVLDLLEAKNLLVE-------SKGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370 L KSDG+ Y DLA Y K Y+ F +YV+G++ + + K+L+AV Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKSVYVVGNEQAAHFKQLKAVLKEMGYDWS 354 Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 A +S +K + +LL V + ++ + + V Sbjct: 355 DDMTHVAFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKEAVAHA 413 Query: 417 VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 VG +++F L DFD V + + P YVQYA+AR +SI R+A Sbjct: 414 VGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAD------ 465 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 F + S D ++I + ++PR+I+ + EP +A + +LA F+ + Sbjct: 466 ----FTPSATTTYSLADAESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQSFNKY 521 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++H R + N+ + + RL L +A A+++ L ++GV++PNEM Sbjct: 522 YAH------TRILDDNSERDS--RLALCYATATVLKEALRLLGVDAPNEM 563 >gi|289167053|ref|YP_003445320.1| arginyl-tRNA synthetase(arginine--tRNA ligase) (ARGRS) [Streptococcus mitis B6] gi|288906618|emb|CBJ21452.1| arginyl-tRNA synthetase(arginine--tRNA ligase) (ARGRS) [Streptococcus mitis B6] Length = 563 Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 143/595 (24%), Positives = 253/595 (42%), Gaps = 99/595 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G ++ A + + AEL KI+ +A ++N + Sbjct: 26 LLETPKNSEMGDIAFPAFSLAKVERKAPQMIAAELAE---KINSQAFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + ++L +++ Y IGK V I+ S N P +GH R V+GD+L+ Sbjct: 83 LDKSAISAQVLQAVITEKEHYADQTIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + GY+ + ++ D G Q L ++ W ++A+ + D LK Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194 Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267 + A+ + L+ +W ++ D A+ + RD+ L N ++ E D + Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELQVEFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + ++D L+ +G + E S+ Q ++++ ++ P Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLVE-------SEGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L KSDG+ Y DLA Y K +Y+ F IYV+G + S + K+L+AV + + Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLKEMGYDWS 354 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 + ++ + ++G K+S R G+ I L V E Sbjct: 355 E-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAVSRAKAQIEAKNPELENKDQVA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +++F L + DFD V + + P YVQYAYAR +SI R+A D P Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKA-DFKP 468 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 + + + S D ++I + ++PR+I A EP +A + LA F+ Sbjct: 469 ETEANY---------SLNDAESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQAFN 519 Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R ENP RL L +A A ++ L ++GVE+P +M Sbjct: 520 KYYAHTRILDENPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563 >gi|171778540|ref|ZP_02919667.1| hypothetical protein STRINF_00519 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282763|gb|EDT48187.1| hypothetical protein STRINF_00519 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 563 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 152/595 (25%), Positives = 257/595 (43%), Gaps = 99/595 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G L+ A L+R L P IA I K+D A +IN + Sbjct: 26 LLEVPKNSDMGDLAF-PAFSLARILRKAPQMIAAEIAE--KMDTAGFEKIEAVGPYINFF 82 Query: 93 LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + +L ++ +G +Y G G V I+ S N P +GH R V+GD+LA Sbjct: 83 LDKKSISADVLGQVIANGSDYASQDEGHGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY+ + ++ D G Q L ++ W ++A+ + D Y + + Sbjct: 143 NIFEKLGYKAVKINHLGDWGKQFGMLIVAYKKWGDEEAVKAHPIDELLKLYVRINAEAET 202 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD-LKALN-IQHDIFISEDDFHRG 268 K D+ + E E D ++ + RD+ L N + +++ +S D F+ G Sbjct: 203 KPELDEEAREWFRKLE------AGDEEAISLWQWFRDESLVEFNRLYNELGVSFDSFN-G 255 Query: 269 DP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 + + +++D L +G + E S+ Q ++++ ++ P L Sbjct: 256 EAFYNDKMDEVVDILTEKGLLEE-------SQGAQVVNLEKY-----------GIEHPAL 297 Query: 326 --KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKKA 379 KSDG+ Y DLA Y K Y+ F IYV+G++ S + K+L+AV + E Sbjct: 298 IKKSDGATLYITRDLAAALYRKRTYD--FAKAIYVVGNEQSAHFKQLKAVLNEMDFEWNE 355 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 I + LV ++G K+S R G+ I L + E Sbjct: 356 DITHVPFGLVT--KEGK--KLSTRKGNVILLEPTIAEAVKRAEDQINAKNPNLADKEAIA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +++F L DFD V + + P YVQYA+AR +SI R+AK Sbjct: 412 HAVGVGAIKFYDLKTDRLNGYDFDLDAMVSFEGETGP--YVQYAHARIQSILRKAK---- 465 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 F +V S D +++ + ++PR+I+ A EP +A + LA F+ Sbjct: 466 ------FTPSVNDVYSLDDAESWEIVKLIQDFPRIIKRAADNFEPSIIAKFAISLAQSFN 519 Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R E+P RL L +A A+++ L ++GVE+PNEM Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATATVLKEALRLLGVEAPNEM 563 >gi|257126716|ref|YP_003164830.1| arginyl-tRNA synthetase [Leptotrichia buccalis C-1013-b] gi|257050655|gb|ACV39839.1| arginyl-tRNA synthetase [Leptotrichia buccalis C-1013-b] Length = 573 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 134/599 (22%), Positives = 250/599 (41%), Gaps = 92/599 (15%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 +++I I+ G TN AM+ S+ +G +P IA I+ + + ++ + +AG GF Sbjct: 25 IEKIDIQNSTKKEFGDFQTNFAMMSSKLIGKNPREIANTIIENFEKNDIIEKLEVAGPGF 84 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 IN++L S+L + + + +Y + + V I++ S N MH+GH R ++GD Sbjct: 85 INIFLKNSFLNEEIKKL--ENEKYDFSFLNIDKTVIIDYSSPNIAKRMHIGHLRSTIIGD 142 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 ++ ++ F G++ + +I D G Q L ++ + Y D P G +Y+ Sbjct: 143 SIKRILNFLGFKTLADNHIGDWGTQFGKLIVAYKNWLDKKAYEED---PIGELERIYVLF 199 Query: 209 VGK-----ELADKYSSEL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 K L D+ EL L E + K++ + +K + L++ D + Sbjct: 200 SDKAKKDPALEDEAREELKKLQLGNEDNQKLWKEF-IDISLKEYNKVYERLDVNFDYYYG 258 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E ++ PS +L K K + D + F DD Sbjct: 259 ESFYNDMMPS------------------VLEELKKKNIAREDQGALVVFFE-----DDKL 295 Query: 322 RPLL--KSDGSYTYFAADLAYFKC-KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE-- 376 P + K DGS+ Y +DLA K K E D +Y+ + K++ + + E Sbjct: 296 PPAIVQKKDGSFLYTTSDLATMKFRKNELKVDEAVYLTDDRQQNHFKQVFEIGKMLGEPY 355 Query: 377 --KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 KK I + + R G I S R+G+ I L ++DE Sbjct: 356 DYKKTHI------VFGIMRFGDQI-FSSRSGNTIRLVDLLDEAKKQVKKVIDEKNPNIPE 408 Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFR 466 +GS ++++ L + + + F + KV + P Y+QY Y R SIFR Sbjct: 409 EEKEKIAETIGSGAIKYFDLSQNRTSDITFTWEKVLNFEGNTGP--YLQYTYVRIMSIFR 466 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 + ++ ++ N+ E D E +L L ++P+ + + P +A YL+ Sbjct: 467 KLEEE------NINVENMDIVLDEMDGIERELASELLKFPQAVVKSYENFRPNIIADYLF 520 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 D A +F+ ++ ++ ++++ R+ L A ++ GL ++G+++ N M Sbjct: 521 DTAKLFNSFYNSS------SILKEEDKQVMDARILLAKKTAFVLKEGLELLGIKTVNRM 573 >gi|218689874|ref|YP_002398086.1| arginyl-tRNA synthetase [Escherichia coli ED1a] gi|254782963|sp|B7MW70|SYR_ECO81 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|218427438|emb|CAR08336.2| arginyl-tRNA synthetase [Escherichia coli ED1a] Length = 577 Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 149/586 (25%), Positives = 247/586 (42%), Gaps = 88/586 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G K T V +++ + N MHVGH R ++GD + F G++V Sbjct: 97 QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGK-----EL 213 R ++ D G Q L + W +Q N +DL EG+Y KH + E Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRDAK-KHYDEDEEFAER 209 Query: 214 ADKYSSELLNFPE---EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 A Y +L + E E W +V Q +I D L + + D + E ++ P Sbjct: 210 ARNYVVKLQSGDEYFHEMWRKLVDITMTQN--QITYDRLN-VTLTRDDVMGESLYNPMLP 266 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I+ +L +G E S+ +D F++ G+ + + K DG Sbjct: 267 G----IVADLKAKGLAVE-------SEGATVVFLDE----FKNKE-GEPMGVIIQKKDGG 310 Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLC 386 Y Y D+A K +YE D ++Y + S ++ + A+ A V E + + Sbjct: 311 YLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFG 370 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGS 419 + L +DG P K RAG + L ++DE VG Sbjct: 371 MM--LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGI 426 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 +V++ L + + FD+ + + N Y+QYAY R S+FR+A +I + L Sbjct: 427 GAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QL 481 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 482 AAAPVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH- 536 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 -----CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|82776478|ref|YP_402827.1| arginyl-tRNA synthetase [Shigella dysenteriae Sd197] gi|309789294|ref|ZP_07683885.1| arginyl-tRNA synthetase [Shigella dysenteriae 1617] gi|109895035|sp|Q32H69|SYR_SHIDS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|81240626|gb|ABB61336.1| arginine tRNA synthetase [Shigella dysenteriae Sd197] gi|308922829|gb|EFP68345.1| arginyl-tRNA synthetase [Shigella dysenteriae 1617] Length = 577 Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 142/588 (24%), Positives = 251/588 (42%), Gaps = 92/588 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGT----KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158 + S + +G T + +++ + N MHVGH R ++GD + F G Sbjct: 97 QQALAS------DRLGVATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLG 150 Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELA 214 ++V R ++ D G Q L + W +Q N +DL EG+Y A Sbjct: 151 HKVIRANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------A 196 Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSP 272 K+ E F E +VK +Q+ + R+ + L DI ++++ + R + + Sbjct: 197 KKHYDEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTL 250 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDG 329 RD + + + GI+ K+K + + ++F G+ + + K DG Sbjct: 251 TRDDVMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDG 309 Query: 330 SYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLL 385 Y Y D+A K +YE + ++Y + S ++ + A+ A V E + + Sbjct: 310 GYLYTTTDIACAKYRYETLHAERVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMF 369 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418 + L +DG P K RAG + L ++DE VG Sbjct: 370 GMM--LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMSADELEKLANAVG 425 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 +V++ L + + FD+ + + N Y+QYAY R S+FR+A ++D + Sbjct: 426 IGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EIDEE 479 Query: 479 -LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 L VI +E E QL L ++ + P+ + YLYDLA +F G + Sbjct: 480 QLAAAPVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYE 535 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 536 H------CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|307710942|ref|ZP_07647367.1| arginyl-tRNA synthetase [Streptococcus mitis SK321] gi|307617243|gb|EFN96418.1| arginyl-tRNA synthetase [Streptococcus mitis SK321] Length = 563 Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 144/595 (24%), Positives = 251/595 (42%), Gaps = 99/595 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G ++ A L++ P IA + KI+ +A ++N + Sbjct: 26 LLETPKNSEMGDIAF-PAFSLAKVERKAPQMIATELAE--KINSQAFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + ++L +++ Y IGK V I+ S N P +GH R V+GD+L+ Sbjct: 83 LDKSAISAQVLQAVITQKEHYADQTIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + GY+ + ++ D G Q L ++ W ++A+ + D LK Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194 Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267 + A+ + L+ +W ++ D A+ + RD+ L N ++ E D + Sbjct: 195 RINAEAENDPSLDDEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELKVEFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + ++D L+ +G + E S+ Q ++++ ++ P Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLVE-------SEGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L KSDG+ Y DLA Y K +Y+ F IYV+G + S + K+L+AV + + Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 ++ + ++G K+S R G+ I L V E Sbjct: 355 D-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAVSRAKAQIEAKNPELENKDQVA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +++F L + DFD V + + P YVQYAYAR +SI R+A Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD---- 465 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 F S DT ++I + ++PR+I A EP +A + LA F+ Sbjct: 466 ------FKPETASNYSLNDTESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQAFN 519 Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R ENP RL L +A A ++ L ++GVE+P +M Sbjct: 520 KYYAHTRILDENPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563 >gi|270262239|ref|ZP_06190511.1| arginyl-tRNA synthetase [Serratia odorifera 4Rx13] gi|270044115|gb|EFA17207.1| arginyl-tRNA synthetase [Serratia odorifera 4Rx13] Length = 576 Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 136/582 (23%), Positives = 253/582 (43%), Gaps = 81/582 (13%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE +V + + V IAG GFIN++L+ ++ + + Sbjct: 37 GDYQANGVMSVAKKLGMPPRQLAEKVVQLLDLGDIASKVEIAGPGFINIFLNGEWVAQQV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 V++ + G + + T V I++ + N MHVGH R ++GD A F G++V Sbjct: 97 DQ-VLNAPKLGIAPVKQQTIV-IDYSAPNVAKEMHVGHLRSTIIGDAAARTQEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGKELADKYSSEL 221 R ++ D G Q L Y + + N N SD+ Y + A K+ E Sbjct: 155 RANHVGDWGTQFGMLI-----AYLEKMQNENASDMGLSDLEQFYRE------AKKHYDED 203 Query: 222 LNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQH---DIFISEDDFHRGDP--- 270 F E +VK Y ++ K++ + + + ++ ++EDD G+ Sbjct: 204 AEFAERARAYVVKLQGGDQYCLKMWRKLVDITMAQNQLTYNRLNVTLTEDDV-MGESLYN 262 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + + +I+ +L +G E S+ +D Q G+ + + K DG Sbjct: 263 AMLPEIVADLKAKGLAVE-------SEGATVVFLDEYQ-----NKDGEPMGVIIQKKDGG 310 Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382 Y Y D+A K +YE G D ++Y + S + V++ + ++S + Sbjct: 311 YLYTTTDIACAKYRYETLGADRVLYYIDSRQHQHLMQAWTIVRKAGYIPDSLSLEHHMFG 370 Query: 383 VLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LRHVVDEVGSDSVR 423 ++L + + + R G +++S RAG I ++H+ + VG +V+ Sbjct: 371 MMLGKDGKPFKTRAGGTVRLSDLLDEAIDRAGKLIAEKNPDMPAEEMQHLANVVGIGAVK 430 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + L + + FD+ + + N Y+QYAY R S+F++A LD + Sbjct: 431 YADLSKSRTTDYIFDWDNMLA-FEGNTAPYMQYAYTRVASVFKRA-----GLDENSLTLP 484 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ E E+ L L ++ VI P+ + YLYDLA +F G + H Sbjct: 485 LVMTEER----EIALATRLLQFEEVITTVARDGTPHVMCTYLYDLAGLFSGFYEH----- 535 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + A++ + RL+L A + +GL+ +G+++ M Sbjct: 536 -CQILNADSEEARQSRLKLALLTARTLKTGLDTLGIDTVERM 576 >gi|237731911|ref|ZP_04562392.1| arginyl-tRNA synthetase [Citrobacter sp. 30_2] gi|226907450|gb|EEH93368.1| arginyl-tRNA synthetase [Citrobacter sp. 30_2] Length = 577 Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 144/588 (24%), Positives = 244/588 (41%), Gaps = 92/588 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P +L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPVFLAQHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G K T V +++ + N MHVGH R ++GD + F G+ V Sbjct: 97 QQALASD-RLGVTQPAKQTVV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + W +Q N +DL EG+Y A K+ Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMALADL-EGFYRD----------AKKHY 200 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276 E F E +VK +Q + R+ + L DI +S++ + R + + RD Sbjct: 201 DEDEAFAERARSYVVK---LQGGDEYFREMWRKLV---DITMSQNQLTYDRLNVTLTRDD 254 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF---RSTMVGDDVDRPLLKSDGSYTY 333 + + + GI+ K+K + + ++F G+ + + K DG Y Y Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEYKNKEGEPMGVIIQKKDGGYLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLL 385 D+A K +YE D ++Y + S + V++ V +V + ++L Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMML 373 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418 +DG P K RAG + L ++DE VG Sbjct: 374 G------KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVG 425 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 +V++ L + + FD+ + + N Y+QYAY R S+FR+A D+D Sbjct: 426 IGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDES 479 Query: 479 -LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 L V+ E E QL L ++ + P+ + YLYD+A +F G + Sbjct: 480 ALANAQVVISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYE 535 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 536 H------CPILSAENEEIRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|77405110|ref|ZP_00782209.1| arginyl-tRNA synthetase [Streptococcus agalactiae H36B] gi|77410827|ref|ZP_00787184.1| arginyl-tRNA synthetase [Streptococcus agalactiae CJB111] gi|77163045|gb|EAO73999.1| arginyl-tRNA synthetase [Streptococcus agalactiae CJB111] gi|77176253|gb|EAO79023.1| arginyl-tRNA synthetase [Streptococcus agalactiae H36B] Length = 563 Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 142/588 (24%), Positives = 254/588 (43%), Gaps = 85/588 (14%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ + G L+ A L++ L P IA I +IK D + V G ++N + Sbjct: 26 LLETPKNSSMGDLAF-PAFSLAKTLRKAPQIIASDIAEQIKSD-QFEKVEAVGP-YVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + + ++L ++ G Y IG+G V I+ S N P +GH R V+GD+LA Sbjct: 83 LDKAAISSQVLKQVLSDGSAYATQNIGEGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY + ++ D G Q L ++ W ++A+ + D Y + + Sbjct: 143 NIFDKIGYHPVKINHLGDWGKQFGMLIVAYKKWGNEEAVRAHPIDELLKLYVRINAEAET 202 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHRGD 269 D+ + E E D + + RD+ L N +D D + G+ Sbjct: 203 DPSVDEEAREWFRKLE------ANDPEATELWQWFRDESLLEFNRLYDKMNVTFDSYNGE 256 Query: 270 P---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL- 325 + ++++ L + + E SK Q ++++ ++ P L Sbjct: 257 AFYNDKMEEVLELLESKNLLVE-------SKGAQVVNLEKY-----------GIEHPALI 298 Query: 326 -KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV----------- 370 KSDG+ Y DLA Y K Y+ F IYV+G++ S + K+L+AV Sbjct: 299 KKSDGATLYITRDLAAALYRKRTYD--FAKSIYVVGNEQSAHFKQLKAVLKEMDYDWSDD 356 Query: 371 ------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 A +S +K + +LL V + ++ + + V VG Sbjct: 357 MTHVPFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKDKVAQAVG 415 Query: 419 SDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 +++F L + DFD V + + P YVQYA+AR +SI R+A F + Sbjct: 416 VGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAN--FNPSNS 471 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 D + N D ++I + ++PR+I A EP +A + +LA F+ +++ Sbjct: 472 DNYSLN--------DVESWEIIKLIQDFPRIIVRAADNFEPSIIAKFAINLAQCFNKYYA 523 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H R + + +++ RL L +A A+++ L ++GV++PNEM Sbjct: 524 HTR-------ILDEDAEISS-RLALCYATATVLKESLRLLGVDAPNEM 563 >gi|119943800|ref|YP_941480.1| arginyl-tRNA synthetase [Psychromonas ingrahamii 37] gi|166232827|sp|A1SQW6|SYR_PSYIN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|119862404|gb|ABM01881.1| arginyl-tRNA synthetase [Psychromonas ingrahamii 37] Length = 582 Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 145/625 (23%), Positives = 264/625 (42%), Gaps = 108/625 (17%) Query: 16 KEIDCKIKVE---KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72 + I C IK E I RI I+R +D +HG + N A++L++P +P +AELI+A I Sbjct: 11 QAIVCLIKQEIIPADIQPRINIDRTKDKSHGDYANNLALMLAKPAKQNPRHLAELIIANI 70 Query: 73 KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP 132 V + IAG GFIN +++P++L K + + + + I++ S N Sbjct: 71 PESTLVIKMEIAGPGFINFFINPNFLEKQIDGAYLDK-RLNVQIEANPQTIVIDYSSPNL 129 Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI------------------ 174 MHVGH R +++GD +A + F G V R+ ++ D G Q Sbjct: 130 AKEMHVGHLRSSIIGDAVARTLEFKGNNVVRQNHVGDWGTQFGMLLAYMEELRAKGEPIE 189 Query: 175 NTLA-LSVFWRYQQALYNNDSDLP-EGYYPGVYLKHVGKE---LADKYSSELLNFPEEKW 229 N LA L +F+R + ++ D + V L+ K+ L K++ L+ +E + Sbjct: 190 NNLANLEIFYRAAKGRFDESEDFATRARHLVVKLQGGNKDCLKLWAKFNETSLSHCQETY 249 Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 + + + R D++ + +D + ++++L +QG + + Sbjct: 250 QRL--------GVSLTRADVRGESSYND--------------QLAVVVEDLDKQGLLQQ- 286 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERG 348 S+ + +D F++ GD + + K DG + Y +DLA + + E Sbjct: 287 ------SQGAKCVFLDN----FKNKE-GDPLPVIIQKKDGGFLYATSDLAAMRYRQNELN 335 Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAA---VSEKKAQINVLLCELVRLYRDGMPIKMSKRA- 404 D ++Y + + + +++ VA + V+EK + ++ + + DG P K A Sbjct: 336 ADRILYFVDARQGLHFQQVFEVARSAGFVNEKTSLEHMPFGTV--MGEDGRPFKTRSGAV 393 Query: 405 ---GDFIT---------------------LRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 D +T LRH+ VG SV++ L + + F F Sbjct: 394 AKLADLLTEAEVRAYELVKEKNKEMSEPELRHIASVVGISSVKYADLSKNRTSDYTFSFD 453 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500 + + N Y+ YAY R SIF +A + + + QE E D L Sbjct: 454 SMLS-FEGNTAPYLLYAYTRVVSIFNKAGIEMGSVTAAV----SLTQEKEID-----LAN 503 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 L ++ +I+ P+ L YL++LA +F + E + + +K + RL Sbjct: 504 KLIQFNDIIDQVAKQGMPHFLCSYLFELAGLFSSFY----EACPILIAETETQKQS--RL 557 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 +L A + GL+++G+ + M Sbjct: 558 KLAGLTAKTLKQGLSLLGINTLERM 582 >gi|238021933|ref|ZP_04602359.1| hypothetical protein GCWU000324_01837 [Kingella oralis ATCC 51147] gi|237866547|gb|EEP67589.1| hypothetical protein GCWU000324_01837 [Kingella oralis ATCC 51147] Length = 570 Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 137/587 (23%), Positives = 243/587 (41%), Gaps = 84/587 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I ++ +D G N M ++ L +P +A+ I + +P + +AG GFINL Sbjct: 25 IALQPAKDAKFGDFQINGVMGAAKSLKQNPRELAQKIAGLLAANPLFTAAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+P ++ LS+ + G + K V I++ S N MHVGH R +++GD+LA Sbjct: 85 RLNPEFIAAQLSA---ADSRLGVATVAKSKTVVIDYSSPNLAKEMHVGHLRSSIIGDSLA 141 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ F G++V R+ ++ D G Q L + + Q +DL E +Y ++ Sbjct: 142 RVLGFLGHKVIRQNHVGDWGTQFGMLVAYLAEQQQDDANFRLADL-EQFYRNAKVRFDED 200 Query: 212 E----LADKYSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 E A +Y +L E W D S+Q + + + L L + D+ E + Sbjct: 201 ENFANTAREYVVKLQGGDETVLSWWRKFVDISLQ-HAETVYEKLGLLLERGDV-AGESSY 258 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPL 324 + +++++D L + G D + +++F + D D +P Sbjct: 259 N----DDLQNVVDELLQHGLA---------------VDDNGTKVMFLDELKNQDGDPQPF 299 Query: 325 L--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381 + K DG + Y DLA + + D ++YV+ + S + ++L A + Sbjct: 300 IIQKQDGGFLYATTDLACVRHRVRNLHADRILYVVDTRQSLHFQQLFAATRKAGWLPENV 359 Query: 382 NVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416 + +DG P K R+GD + L ++DE Sbjct: 360 EAEFIGFGTMMGKDGKPFKT--RSGDTVKLVELLDEATERATALVKEKNPELPADTAAQI 417 Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +V++ L + + FD+ + + N Y+QYAY R +S+ R+A Sbjct: 418 GRAVGIGAVKYADLSKNRNSDYIFDWENMLS-FEGNTAPYLQYAYTRVQSVLRRAGAW-- 474 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 P + + + E QL V L ++ V+ + P+ LA YLY LA++F Sbjct: 475 --------NETAPLQIK-EPLEQQLAVELLKFEDVLNSVAETSFPHYLANYLYQLAALFS 525 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + P L+ A RLQL + +GL ++G+E Sbjct: 526 RFY---EACPILKAEGATRD----TRLQLAKLTGETLKTGLGLLGIE 565 >gi|145591957|ref|YP_001153959.1| arginyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514] gi|166232828|sp|A4WLP0|SYR_PYRAR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|145283725|gb|ABP51307.1| arginyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514] Length = 630 Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 142/588 (24%), Positives = 251/588 (42%), Gaps = 108/588 (18%) Query: 82 FIAGKGFINLYLSPSYLRKILSSIVVS-----GIEYGRNLIGKGTKVNIEFVSANPTGPM 136 +I+G LY++ K L +V G +YG + +E SANP P+ Sbjct: 67 YISGLSAEGLYVNADLNAKRLGELVFEAVAKMGKKYGFTEECQLGSFLVEHTSANPIHPL 126 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL---SVFWRYQQALYNND 193 H+GH R A++GD+LA L+ F V +Y++D G Q+ + +V ++ + Sbjct: 127 HIGHGRNAILGDSLARLLRFCDNRVEVHFYVDDCGVQVMYATIGYNAVRDEAREWIERAK 186 Query: 194 SDLPEGYY---------PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY--SVQAMM 242 DL G+ G K + D++ L+ +E W+ ++K S ++ Sbjct: 187 PDLVVGHIYSATNAVAEIGRLKKEAERAQDDEHKRSLIGEIDE-WVAVLKRLMESEGDLV 245 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSP---IRDIID--------NLARQGY------ 285 + + L ++ + + GDP +R+++D LAR G Sbjct: 246 AKVVERLGQRDVAGEAVELNRRYEAGDPEAKRVVREVVDLVLRGQRETLARLGIEIDRWD 305 Query: 286 ------VYEG----ILPPPKSKTTQKCDMDRKQLLFRSTMVGDD------VDRP------ 323 V+ G I+ + + Q + ++FR+ DD +D P Sbjct: 306 YESELAVWSGEASRIVEELQRRWPQYVEYKGGAVVFRADKFVDDFKLWDVLDLPKFIPPV 365 Query: 324 -LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD--HSGYVKRLEAVAAAVSEKKAQ 380 L +SDG+ Y D+AY + +GFD ++ V+ ++ H R+ A + + Sbjct: 366 TLTRSDGTTLYVTRDVAYALWQARQGFDKVVRVISTEQTHEQAHVRIILYALGFEDVAKK 425 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------V 417 I E+V L GM KMS R G +I+L ++DE V Sbjct: 426 IVHYAYEMVNL--PGM--KMSARRGRYISLDEILDEAAERSASLVKEKSPEIAGVIAEKV 481 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G SVR+ L + ++F + +V ++N ++QY Y R SI +A PD++ Sbjct: 482 GVGSVRYAFLSTSPRKPIEFRW-EVVLNLRQNSGTFLQYTYVRAYSILEKA----PDVER 536 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 P ++ +E E L+V +AE+P V+ A A P +A YL LA +F+ ++ Sbjct: 537 ASVPEQMLEEEKE-------LLVKIAEWPSVVREAVRALRPDYVAEYLDGLALLFNSYYE 589 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P L+ V+ + R+ LV+AV +++ +G I+G+ + +M Sbjct: 590 KA---PVLKAVEGVRK----FRIALVNAVKTVLEAGFYILGIPTLTKM 630 >gi|322412861|gb|EFY03769.1| arginyl-tRNA synthetase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 563 Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 139/590 (23%), Positives = 258/590 (43%), Gaps = 89/590 (15%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G L+ A L++ L P IA + +I D +A +IN + Sbjct: 26 LLETPKNSDMGDLAF-PAFSLAKVLRKAPQMIAGELAEQI--DASQFEKVVAVGPYINFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + + ++L ++ +G +Y + G+G V I+ S N P +GH R V+GD+LA Sbjct: 83 LDKAKISSQVLEQVITAGSDYAQQDEGQGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ A GY+ + ++ D G Q L ++ W + A+ + D LK Sbjct: 143 NIFAKMGYQPVKINHLGDWGKQFGMLIVAYKKWGDEAAVQAHPID--------ELLKLYI 194 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 + A+ + ++ +W ++D +A + + RD+ L N +D D + Sbjct: 195 RINAEAETDPTVDGEAREWFRKLEDGDKEATELWQWFRDESLLEFNRLYDQLNVTFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + ++++ L + + E SK Q ++++ ++ P Sbjct: 255 GEAFYNDKMDEVLELLETKNLLVE-------SKGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370 L KSDG+ Y DLA Y K Y+ F +YV+G++ + + K+L+AV Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKSVYVVGNEQAAHFKQLKAVLKEMGYDWS 354 Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 A +S +K + +LL V + ++ + + V Sbjct: 355 DDMTHVAFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKEAVAHA 413 Query: 417 VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 VG +++F L DFD V + + P YVQYA+AR +SI R+A Sbjct: 414 VGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAD------ 465 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 F + S D ++I + ++PR+I+ + EP +A + +LA F+ + Sbjct: 466 ----FTPSATTTYSLADAESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQSFNKY 521 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++H R + N+ + + RL L +A A+++ L ++GVE+PNEM Sbjct: 522 YAH------TRILDDNSERDS--RLALCYATATVLKEALRLLGVEAPNEM 563 >gi|187736645|ref|YP_001878757.1| arginyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835] gi|187426697|gb|ACD05976.1| arginyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835] Length = 585 Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 154/596 (25%), Positives = 245/596 (41%), Gaps = 95/596 (15%) Query: 39 DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98 D G +NAAM+L++ +P +A+ + RI D V S+ IAG GFIN + P + Sbjct: 36 DLRFGDYQSNAAMVLAKRCRTNPRALAQQVADRIGQDA-VCSLEIAGPGFINFRIRPEFY 94 Query: 99 RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158 L +++ G + + I+F + N PMHVGH R ++GD L+ + F G Sbjct: 95 AARLLAMLADD-RLGVEKVQAPKTIVIDFSAPNVAKPMHVGHIRSTIIGDALSRVARFVG 153 Query: 159 YEVTREYYINDAGAQINTLALSVFWRY-----QQALYNNDSDLPEGYYPGVYLKHVGK-E 212 + V + +I D G Q + W + +QAL N D Y V L K E Sbjct: 154 HHVITDNHIGDWGTQFGM----ILWGWKNILDEQALAANPIDELLRVYKDVNLMCKEKPE 209 Query: 213 LADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 L D +EL L + + L I K + S + KI L+I D ++ E F+ Sbjct: 210 LLDTCKAELVKLQAGDGENLAIWKRCVEVSKSGLSKI----YDQLDIHFDYWLGE-SFYN 264 Query: 268 GDPSPIRD--IIDNLARQG-----YVYEGILPPPKSK--TTQKCDMDRKQLLFRSTMVGD 318 +P+ D I +AR+ +G +PP + K + + R Sbjct: 265 DALAPLVDGMIAAGMARESDGAICVFSDGSVPPNEDPFLVQDKGEWRANPCIIR------ 318 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 K+DG + Y DLA + G D++ YV+G+ + + +++ + Sbjct: 319 -------KADGGFLYATTDLATLDHRIRTWGADSIWYVVGAPQALHFRQIFSTQRRRGMD 371 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416 ++ + L D P K R+GD ++L+ V+DE Sbjct: 372 GDYRHIAFGSI--LGDDRKPFKT--RSGDTVSLQDVLDEAIERAARVVEEKSPDMPDEEK 427 Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAK 469 VG +V+F L + F++ K+ Q P Y+Q +Y R RSIFR+ Sbjct: 428 KRVAEVVGIGAVKFAELSQNRMTDYVFNWDKMLALQGDTAP--YLQNSYVRVRSIFRK-- 483 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 LD + Q SE +E+ L LA Y V+ P LA YL+DLA Sbjct: 484 -----LDGGPLDWSAPIQLSE--DAEIHLARLLARYGEVVPQVLDDCRPNVLAAYLFDLA 536 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 FH + P L+ + + RL L A + GL ++G++ P+ M Sbjct: 537 RAFHSFYE---ACPVLK----SEGPVRHSRLALCELTARTLKHGLGLLGIQLPDRM 585 >gi|22538237|ref|NP_689088.1| arginyl-tRNA synthetase [Streptococcus agalactiae 2603V/R] gi|76798536|ref|ZP_00780769.1| arginyl-tRNA synthetase [Streptococcus agalactiae 18RS21] gi|77414025|ref|ZP_00790196.1| arginyl-tRNA synthetase [Streptococcus agalactiae 515] gi|38372522|sp|Q8DWV9|SYR_STRA5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|22535150|gb|AAN00961.1|AE014287_1 arginyl-tRNA synthetase [Streptococcus agalactiae 2603V/R] gi|76586100|gb|EAO62625.1| arginyl-tRNA synthetase [Streptococcus agalactiae 18RS21] gi|77159907|gb|EAO71047.1| arginyl-tRNA synthetase [Streptococcus agalactiae 515] Length = 563 Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 142/588 (24%), Positives = 254/588 (43%), Gaps = 85/588 (14%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ + G L+ A L++ L P IA I +IK D + V G ++N + Sbjct: 26 LLETPKNSSMGDLAF-PAFSLAKTLRKAPQIIASDIAEQIKSD-QFEKVEAVGP-YVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + + ++L ++ G Y IG+G V I+ S N P +GH R V+GD+LA Sbjct: 83 LDKAAISSQVLKQVLSDGSAYATQNIGEGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY + ++ D G Q L ++ W ++A+ + D Y + + Sbjct: 143 NIFDKIGYHPVKINHLGDWGKQFGMLIVAYKKWGNEEAVRAHPIDELLKLYVRINAEAET 202 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHRGD 269 D+ + E E D + + RD+ L N +D D + G+ Sbjct: 203 DPSVDEEAREWFRKLE------ANDPEATELWQWFRDESLLEFNRLYDQMNVTFDSYNGE 256 Query: 270 P---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL- 325 + ++++ L + + E SK Q ++++ ++ P L Sbjct: 257 AFYNDKMDEVLELLESKNLLVE-------SKGAQVVNLEKY-----------GIEHPALI 298 Query: 326 -KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV----------- 370 KSDG+ Y DLA Y K Y+ F IYV+G++ S + K+L+AV Sbjct: 299 KKSDGATLYITRDLAAALYRKRTYD--FAKSIYVVGNEQSAHFKQLKAVLKEMDYDWSDD 356 Query: 371 ------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 A +S +K + +LL V + ++ + + V VG Sbjct: 357 MTHVPFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKDKVAQAVG 415 Query: 419 SDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 +++F L + DFD V + + P YVQYA+AR +SI R+A F + Sbjct: 416 VGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAN--FSPSNS 471 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 D + N D ++I + ++PR+I A EP +A + +LA F+ +++ Sbjct: 472 DNYSLN--------DVESWEIIKLIQDFPRIIVRAADNFEPSIIAKFAINLAQCFNKYYA 523 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H R + + +++ RL L +A A+++ L ++GV++PNEM Sbjct: 524 HTR-------ILDEDAEISS-RLALCYATATVLKESLRLLGVDAPNEM 563 >gi|161502977|ref|YP_001570089.1| arginyl-tRNA synthetase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189083545|sp|A9MNC4|SYR_SALAR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|160864324|gb|ABX20947.1| hypothetical protein SARI_01039 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 577 Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 144/588 (24%), Positives = 242/588 (41%), Gaps = 92/588 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + + V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLDPAFLAEQV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G + + T V +++ + N MHVGH R ++GD + F G+ V Sbjct: 97 QQALASD-RLGVSQPARQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHHVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + W +Q N +DL EG+Y A K+ Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMALADL-EGFYRD----------AKKHY 200 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276 E F E +VK S A + + L DI ++++ + R + + RD Sbjct: 201 DEDEGFAERARNYVVKLQSGDAYFREMWRKLV------DITMTQNQITYDRLNVTLTRDD 254 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333 + + + GI+ K+K + + ++F GD + + K DG Y Y Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLL 385 D+A K +YE D ++Y + S + V++ V +V + ++L Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMML 373 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VG 418 +DG P K RAG + L ++DE VG Sbjct: 374 G------KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVG 425 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 +V++ L + + FD+ + + N Y+QYAY R S+FR+A D+D Sbjct: 426 IGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQ 479 Query: 479 -LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 L VI E E QL L ++ + P+ + YLYD+A +F G + Sbjct: 480 ALASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYE 535 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H + A N + RL+L A + GL+ +G+E+ M Sbjct: 536 H------CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|19746992|ref|NP_608128.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS8232] gi|23822183|sp|Q8NZ22|SYR_STRP8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|19749247|gb|AAL98627.1| putative arginyl-tRNA synthetase [Streptococcus pyogenes MGAS8232] Length = 563 Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 139/590 (23%), Positives = 257/590 (43%), Gaps = 89/590 (15%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G L+ A L++ L P IA + +I + + V G +IN + Sbjct: 26 LLETPKNSDMGDLAF-PAFSLAKVLRKAPQMIASELAEQID-ESQFEKVVAVGP-YINFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + + ++L ++ +G +Y + G+G V I+ S N P +GH R V+GD+LA Sbjct: 83 LDKAKISSQVLEQVITAGSDYAQQDEGQGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + A GY+ + ++ D G Q L ++ W + A+ + D LK Sbjct: 143 HIFAKMGYQPVKINHLGDWGKQFGMLIVAYKKWGDEAAVQAHPID--------ELLKLYV 194 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 + A+ + ++ +W ++D +A + + RD+ L N +D D + Sbjct: 195 RINAEAETDPTIDEEAREWFRKLEDGDKEATELWQWFRDESLLEFNRLYDQLHVTFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + +++D L + + E SK Q ++++ ++ P Sbjct: 255 GEAFYNDKMDEVLDLLEAKNLLVE-------SKGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370 L KSDG+ Y DLA Y K Y+ F +YV+G++ + + K+L+AV Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKSVYVVGNEQAAHFKQLKAVLKEMGYDWS 354 Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 A +S +K + +LL V + ++ + + V Sbjct: 355 DDMTHVAFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKEAVAHA 413 Query: 417 VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 VG +++F L DFD V + + P YVQYA+AR +SI R+A Sbjct: 414 VGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAD------ 465 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 F + S D ++I + ++PR+I+ + EP +A + +LA F+ + Sbjct: 466 ----FTPSATTTYSLADAESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQSFNKY 521 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++H R + N+ + RL L +A A+++ L ++GV++PNEM Sbjct: 522 YAH------TRILDDNSERDN--RLALCYATATVLKEALRLLGVDAPNEM 563 >gi|71904479|ref|YP_281282.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS6180] gi|94991409|ref|YP_599509.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS10270] gi|109895043|sp|Q48QT3|SYR_STRPM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|123257889|sp|Q1JEG8|SYR_STRPD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|71803574|gb|AAX72927.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS6180] gi|94544917|gb|ABF34965.1| Arginyl-tRNA synthetase [Streptococcus pyogenes MGAS10270] Length = 563 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 139/590 (23%), Positives = 255/590 (43%), Gaps = 89/590 (15%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G L+ A L++ L P IA + +I + + V G +IN + Sbjct: 26 LLETPKNSDMGDLAF-PAFSLAKVLRKAPQMIASELAEQID-ESQFEKVVAVGP-YINFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + + ++L ++ +G +Y + G+G V I+ S N P +GH R V+GD+LA Sbjct: 83 LDKTKISSQVLEQVITAGSDYAQQDEGQGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + A GY+ + ++ D G Q L ++ W + A+ + D Y + + Sbjct: 143 HIFAKMGYKPVKINHLGDWGKQFGMLIVAYKKWGDEAAVQAHPIDELLKLYVRINAEAET 202 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 D+ + E W ++D +A + + RD+ L N +D D + Sbjct: 203 DPTVDEEARE--------WFRKLEDGDKEATELWQWFRDESLLEFNRLYDQLHVTFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + +++D L + + E SK Q ++++ ++ P Sbjct: 255 GEAFYNDKMDEVLDLLEAKNLLVE-------SKGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370 L KSDG+ Y DLA Y K Y+ F +YV+G++ + + K+L+AV Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKSVYVVGNEQAAHFKQLKAVLKEMGYDWS 354 Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 A +S +K + +LL V + ++ + + V Sbjct: 355 DDMTHVAFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKEAVAHS 413 Query: 417 VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 VG +++F L DFD V + + P YVQYA+AR +SI R+A Sbjct: 414 VGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAD------ 465 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 F + S D ++I + ++PR+I+ + EP +A + +LA F+ + Sbjct: 466 ----FTPSATTTYSLADAESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQSFNKY 521 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++H R + N+ + RL L +A A+++ L ++GV++PNEM Sbjct: 522 YAH------TRILDDNSERDN--RLALCYATATVLKEALRLLGVDAPNEM 563 >gi|116492437|ref|YP_804172.1| arginyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745] gi|122266099|sp|Q03GE2|SYR_PEDPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|116102587|gb|ABJ67730.1| arginyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745] Length = 562 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 141/587 (24%), Positives = 264/587 (44%), Gaps = 87/587 (14%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 IE P++ G + L++ L P IA +V +I D + V +AG +IN +L Sbjct: 28 IEIPKESKMGDYAF-PTFTLAKVLRKAPQMIASELVEKIDQD-QFEKVEVAGP-YINFFL 84 Query: 94 SPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 + + ++L +++ EYG+N G V I+ S N P+ +GH R V+G++L+ Sbjct: 85 DKTAFGAEVLGTVLSQKAEYGQNDDGNQGNVPIDMSSPNIAKPISMGHLRSTVIGNSLSL 144 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +M+ +GY + ++ D G Q L + W ++ + + + YY + K Sbjct: 145 IMSKNGYNPIKINHLGDWGTQFGKLITAYKLWGSEEEVKADPINKLLEYYVRFH-----K 199 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAM--MKIIRDD-LKALNIQHDIFISEDDFHRG 268 E D+ EL + + W ++D +AM + R++ LK+ +D D ++G Sbjct: 200 E--DQEKPELDDIARD-WFKKLEDGDEEAMNLWQWFREESLKSFKQIYDKLGITFDSYKG 256 Query: 269 DP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 + + +I+ L +G + E S+ Q D+++ L P L Sbjct: 257 EAFYNDKMDEIVQILEDKGLLKE-------SQGAQVVDLEKYNL------------NPAL 297 Query: 326 --KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV------------ 370 K+DG+ Y DLA +Y F+ +YV+G++ + + K+L+AV Sbjct: 298 IKKTDGATLYITRDLAAALYRYRTYDFNQSLYVVGAEQTNHFKQLKAVLKEMGFDWSDDV 357 Query: 371 -----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 +S + ++ VLL E++ +++ + D V EVG Sbjct: 358 HHIPFGLITLNGKKLSTRSGRV-VLLDEVLNDAVSLAKKQINDKNPDLANADTVAKEVGV 416 Query: 420 DSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 +V F L + + DF+ V+ + + P YVQY+ AR SI R+A D+ + Sbjct: 417 GAVIFHDLKNERTNSFDFNLEDVVRFEGETGP--YVQYSRARAESILRKAGDV------E 468 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 F + I +DT + L ++P +++ A EP +A Y LA F+ ++++ Sbjct: 469 EFAQLNITDPKAWDT-----LKALQDFPNIVKRAAAQYEPSVIAKYALGLAKAFNKYYAN 523 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + A++ + T RL LV +V+ ++ L ++GV++P+EM Sbjct: 524 SK-------ILADDEEKT-ARLALVKSVSIVLEESLRLLGVKAPDEM 562 >gi|13542151|ref|NP_111839.1| arginyl-tRNA synthetase [Thermoplasma volcanium GSS1] gi|14325582|dbj|BAB60485.1| tRNA synthetase Arg [Thermoplasma volcanium GSS1] Length = 545 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 131/584 (22%), Positives = 255/584 (43%), Gaps = 107/584 (18%) Query: 40 CAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR 99 H + ++++P G + + E ++ +I+ ++ + G+IN+YL R Sbjct: 31 TGHSDFTVRVFRLINQPDGREKI---EKMIEKIRTIENISGAKLEN-GYINIYLDK---R 83 Query: 100 KILSSIVVSGIEYGR--NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 +L ++ +YG+ + + +V++E SANPTGP+H+G R +++GD+++ L+ Sbjct: 84 GVLRYLLDYVEKYGKYPDTFQEPERVSVEHTSANPTGPLHIGRARNSIIGDSISRLLGRF 143 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNN----DSDLPEGYYPGVYLK-HVGKE 212 GY VT++Y++ND+G Q+ LS++ Y++ YN D+ L + Y +Y + K Sbjct: 144 GYRVTKQYFVNDSGKQM----LSLYTAYEK--YNGPMTMDNLLQD--YQKIYKEIEKDKS 195 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQ---AMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 + ++ + L+ + E+ P + + M++ I L + I D F E DF Sbjct: 196 VEEEIENNLMRY--ERADPNIYGKLREIAGVMLQGITGTLAKVWIGFDEFNWESDF---- 249 Query: 270 PSPIRDIIDNLARQGYVYEGI--LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 R G V + I + P + + ++ +++ L +S Sbjct: 250 -----------IRSGEVEKAIESVNPSEEGGAKYIEVGGRKVF-------------LTRS 285 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387 DG+ YF+ D+AY K + FD +I V+G DH + K LE V + +++++ + Sbjct: 286 DGTTLYFSRDIAYHLYKAQ-NFDWIINVLGEDHKEHGKLLEHVMKGIMNIESKMSFVYYS 344 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN--------------SE 433 + L KMS R G+ +TL +++ +++R + R + S Sbjct: 345 FITLESG----KMSTRRGNIVTLEDLIERTFEEALRIVREKRPDLEEERMKEIAKVIASS 400 Query: 434 LLDFDFCKVKEQS------------KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 + F+ +V + N ++ Y YAR SI ++ + D Sbjct: 401 SIRFNIIRVSAPKPITFRWDEALNFEGNSAPFIMYTYARGASIIKKKERDEKDFS----- 455 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 +E D E +L+ + YP V+ +A P +A YL DLA F+ + R Sbjct: 456 -------TEMDHEEEELVRQMYLYPYVLSDAAQNLRPDIIAGYLIDLAQKFNDFYKACR- 507 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V + R++L+ I+ +I+G++ E+ Sbjct: 508 ------VIGAPDGVYDRRIRLIETYMKIVEDAGDILGIKMLEEI 545 >gi|260598357|ref|YP_003210928.1| arginyl-tRNA synthetase [Cronobacter turicensis z3032] gi|260217534|emb|CBA31733.1| Arginyl-tRNA synthetase [Cronobacter turicensis z3032] Length = 577 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 144/586 (24%), Positives = 238/586 (40%), Gaps = 88/586 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P AE +A + + IAG GFIN++L P++L K + Sbjct: 37 GDYQANGVMAIAKKLGMPPRQFAEQALAHLDLTGIAAKTEIAGPGFINIFLDPAFLAKNV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + V S G + + +++ + N MHVGH R ++GD + F G++V Sbjct: 97 EAAVASD-RAGVEKVSAPQTIVVDYSAPNVAKEMHVGHVRSTIIGDASVRTLEFLGHKVI 155 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND---SDLPEGYYPGVYLKHVGKELADKYSS 219 R ++ D G Q L + QQ + SDL EG+Y A K+ Sbjct: 156 RANHVGDWGTQFGMLI--AYLEKQQKENAGEMALSDL-EGFY----------REAKKHYD 202 Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDII 277 E F E +VK +Q RD + L DI ++++ + R + + RD + Sbjct: 203 EDEAFAERARSYVVK---LQGGDDYCRDMWRKLV---DITMTQNQITYQRLNVTLTRDDV 256 Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYF 334 + + GI+ K+K + + ++F G+ + + K DG Y Y Sbjct: 257 MGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYT 315 Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLC 386 D+A K +YE D ++Y + S + V++ V +V + ++L Sbjct: 316 TTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFGMMLG 375 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGS 419 +DG P K RAG I L ++DE VG Sbjct: 376 ------KDGKPFKT--RAGGTIKLSELLDEALDRARRLVAEKNPDMPADELEKLANAVGI 427 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 +V++ L + + FD+ + + N Y+QYAY R S+FR+A +L Sbjct: 428 GAVKYADLSKSRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKAGVSESEL---- 482 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 V+ Q D E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 483 -TAPVVIQ----DDREAQLAARLLQFEETLGVVARDGTPHVMCAYLYDLAGLFSGFYEH- 536 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A L RL+L A + GL+ +G+E+ M Sbjct: 537 -----CPILSAETDALRQSRLKLALLTAKTLKLGLDTLGIETVERM 577 >gi|215487089|ref|YP_002329520.1| arginyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69] gi|254782961|sp|B7USQ3|SYR_ECO27 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|215265161|emb|CAS09549.1| arginyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69] Length = 577 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 144/583 (24%), Positives = 249/583 (42%), Gaps = 82/583 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G K T V +++ + N MHVGH R ++GD + F G++V Sbjct: 97 QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + W +Q N +DL EG+Y A K+ Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276 E F E +VK +Q+ + R+ + L DI ++++ + R + + RD Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333 + + + GI+ K+K + + ++F G+ + + K DG Y Y Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGASVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389 D+A K +YE D ++Y + S ++ + A+ A V E + + + Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422 L +DG P K RAG + L ++DE VG +V Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 ++ L + + FD+ + + N Y+QYAY R S+FR+A +I + L Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLAAA 484 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 485 PVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH---- 536 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A + ++ RL+L A + GL+ +G+E+ M Sbjct: 537 --CPILSAESEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|156933540|ref|YP_001437456.1| arginyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894] gi|166232785|sp|A7MEC0|SYR_ENTS8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|156531794|gb|ABU76620.1| hypothetical protein ESA_01360 [Cronobacter sakazakii ATCC BAA-894] Length = 577 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 140/583 (24%), Positives = 239/583 (40%), Gaps = 82/583 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P AE +A + + IAG GFIN++L P++L K + Sbjct: 37 GDYQANGVMAIAKKLGMPPRQFAEQALAHLDLTGIAAKTEIAGPGFINIFLDPAFLAKNI 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + V S G + + +++ + N MHVGH R ++GD + F G++V Sbjct: 97 EAAVASD-RAGVEKVSAPQTIVVDYSAPNVAKEMHVGHVRSTIIGDASVRTLEFLGHKVI 155 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222 R ++ D G Q L ++ + QQ N ++ G Y + A K+ E Sbjct: 156 RANHVGDWGTQFGML-IAYLEKQQQ---ENAGEMALSDLEGFYRE------AKKHYDEDE 205 Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIIDNL 280 F E +VK +Q + R+ + L DI ++++ + R + + RD + Sbjct: 206 AFAERARSYVVK---LQGGDEYCREMWRKLV---DITMTQNQITYQRLNVTLTRDDVMGE 259 Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAAD 337 + + GI+ K+K + + ++F G+ + + K DG Y Y D Sbjct: 260 SLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTD 318 Query: 338 LAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCELV 389 +A K +YE D ++Y + S + V++ V +V + ++L Sbjct: 319 IACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFGMMLG--- 375 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422 +DG P K RAG I L ++DE VG +V Sbjct: 376 ---KDGKPFKT--RAGGTIKLSELLDEALDRARRLVAGKNPDMPADELEKLANAVGIGAV 430 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 ++ L + + FD+ + + N Y+QYAY R S+FR+A +L Sbjct: 431 KYADLSKSRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKAGVKESEL-----TA 484 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 V+ Q D E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 485 PVVIQ----DDREAQLAARLLQFEETLGVVARDGTPHVMCAYLYDLAGLFSGFYEH---- 536 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A L RL+L A + GL+ +G+E+ M Sbjct: 537 --CPILTAETDALRQSRLKLALLTAKTLKLGLDTLGIETVERM 577 >gi|238762982|ref|ZP_04623949.1| Arginyl-tRNA synthetase [Yersinia kristensenii ATCC 33638] gi|238698740|gb|EEP91490.1| Arginyl-tRNA synthetase [Yersinia kristensenii ATCC 33638] Length = 576 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 139/582 (23%), Positives = 245/582 (42%), Gaps = 81/582 (13%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ ++ +D + IAG GFIN++L ++ + Sbjct: 37 GDYQANGVMAIAKKLGMQPRQLAEKVIEQLNLDGIASKIEIAGPGFINIFLDRQWVASKV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + + G + T V I++ + N MHVGH R ++GD A + F G+ V Sbjct: 97 DE-ALKAPKLGVQPVEPQTIV-IDYSAPNVAKQMHVGHLRSTIIGDAAARTLEFLGHRVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGKELADKYSSEL 221 R ++ D G Q L Y + + N N SD+ G+ + + A K E Sbjct: 155 RANHVGDWGTQFGMLIA-----YLEKMQNENASDM------GLSDLELFYQQAKKTYDED 203 Query: 222 LNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHD---IFISEDDFHRGDP--- 270 F + +VK +Y Q K++ + I +D + +++DD G+ Sbjct: 204 EEFAQRARAYVVKLQSGDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTKDDVM-GESLYN 262 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + + I+ +L +G E + T D + + G+ + + K DG Sbjct: 263 AMLPGIVADLKAKGLAVE-----SEGATVVYLDEYKNK-------DGEPMGVIIQKKDGG 310 Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382 Y Y D+A K +YE G D ++Y + S + V++ V +V + Sbjct: 311 YLYTTTDIACAKYRYETLGADRVLYYIDSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFG 370 Query: 383 VLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LRHVVDEVGSDSVR 423 ++L + + + R G +K+S +RAG I L+ VVD VG +V+ Sbjct: 371 MMLGKDGKPFKTRSGGTVKLSDLLDEAIERAGKLIAEKNPDMPADELKQVVDAVGIGAVK 430 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + L + + FD+ + N Y+QYAY R S+F++A L L Sbjct: 431 YADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSVFKRAGIDESSLTLPL---- 485 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 VI ++ E L L ++ VI P+ + YLYDLA +F + H Sbjct: 486 VITEDRE-----AALATRLLQFEEVITTVAREGTPHVMCSYLYDLAGLFSSFYEH----- 535 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + A + + RL+L A + GL+ +G+++ M Sbjct: 536 -CQILNAESEESRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 576 >gi|62180486|ref|YP_216903.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|168241540|ref|ZP_02666472.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194449121|ref|YP_002045963.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|75482759|sp|Q57N89|SYR_SALCH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|238693639|sp|B4T808|SYR_SALHS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|62128119|gb|AAX65822.1| arginine tRNA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|194407425|gb|ACF67644.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205339146|gb|EDZ25910.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|322714962|gb|EFZ06533.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 577 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 141/586 (24%), Positives = 240/586 (40%), Gaps = 88/586 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + + V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQV 96 Query: 103 SSIVVSGIEYGRNLIGKGTK--VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + S R + + T+ + +++ + N MHVGH R ++GD + F G+ Sbjct: 97 QQALAS----DRLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 V R ++ D G Q L + W +Q N D+ G Y A K+ E Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 202 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278 F E +VK S A + + L DI ++++ + R + + RD + Sbjct: 203 DEAFAERARNYVVKLQSGDAYFREMWRKLV------DITMTQNQITYDRLNVTLTRDDVM 256 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335 + + GI+ K+K + + ++F GD + + K DG Y Y Sbjct: 257 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 315 Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387 D+A K +YE D ++Y + S + V++ V +V + ++L Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 374 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420 +DG P K RAG + L ++DE VG Sbjct: 375 -----KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIG 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479 +V++ L + + FD+ + + N Y+QYAY R S+FR+A D+D L Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQAL 481 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 VI E E QL L ++ + P+ + YLYD+A +F G + H Sbjct: 482 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 536 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N + RL+L A + GL+ +G+E+ M Sbjct: 537 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|25012094|ref|NP_736489.1| arginyl-tRNA synthetase [Streptococcus agalactiae NEM316] gi|38372523|sp|Q8E2R1|SYR_STRA3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|24413638|emb|CAD47715.1| arginyl-tRNA synthetase [Streptococcus agalactiae NEM316] Length = 563 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 142/588 (24%), Positives = 254/588 (43%), Gaps = 85/588 (14%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ + G L+ A L++ L P IA I +IK D + V G ++N + Sbjct: 26 LLETPKNSSMGDLAF-PAFSLAKTLRKAPQIIASDIAEQIKSD-QFEKVEAVGP-YVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + + ++L ++ G Y IG+G V I+ S N P +GH R V+GD+LA Sbjct: 83 LDKAAISSQVLKQVLSDGSAYATQNIGEGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY + ++ D G Q L ++ W ++A+ + D Y + + Sbjct: 143 NIFDKIGYHPVKINHLGDWGKQFGMLIVAYKKWGNEEAVRAHPIDELLKLYVRINAEAET 202 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHRGD 269 D+ + E E D + + RD+ L N +D D + G+ Sbjct: 203 DPSVDEEAREWFRKLE------ANDPEATELWQWFRDESLLEFNRLYDQMNVTFDSYNGE 256 Query: 270 P---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL- 325 + ++++ L + + E SK Q ++++ ++ P L Sbjct: 257 AFYNDKMDEVLELLESKNLLVE-------SKGAQVVNLEKY-----------GIEHPALI 298 Query: 326 -KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV----------- 370 KSDG+ Y DLA Y K Y+ F IYV+G++ S + K+L+AV Sbjct: 299 KKSDGATLYITRDLAAALYRKRTYD--FAKSIYVVGNEQSAHFKQLKAVLKEMDYDWSDD 356 Query: 371 ------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 A +S +K + +LL V + ++ + + V VG Sbjct: 357 MTHVPFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKDKVAQAVG 415 Query: 419 SDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 +++F L + DFD V + + P YVQYA+AR +SI R+A F + Sbjct: 416 VGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAN--FNPSNS 471 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 D + N D ++I + ++PR+I A EP +A + +LA F+ +++ Sbjct: 472 DNYSLN--------DVESWEIIKLIQDFPRIIVRAADNFEPSIIAKFAINLAQCFNKYYA 523 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H R + + +++ RL L +A A+++ L ++GV++PNEM Sbjct: 524 HTR-------ILDEDAEISS-RLALCYATATVLKESLRLLGVDAPNEM 563 >gi|50915173|ref|YP_061145.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS10394] gi|68052902|sp|Q5X9F1|SYR_STRP6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|50904247|gb|AAT87962.1| Arginyl-tRNA synthetase [Streptococcus pyogenes MGAS10394] Length = 563 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 139/590 (23%), Positives = 255/590 (43%), Gaps = 89/590 (15%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G L+ A L++ L P IA + +I + + V G +IN + Sbjct: 26 LLETPKNSDMGDLAF-PAFSLAKVLRKAPQMIASELAEQID-ESQFEKVVAVGP-YINFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + + ++L ++ +G +Y + G+G V I+ S N P +GH R V+GD+LA Sbjct: 83 LDKAKISSQVLEQVITAGSDYAQQDEGQGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + A GY+ + ++ D G Q L ++ W + A+ + D Y + + Sbjct: 143 HIFAKMGYKPVKINHLGDWGKQFGMLIVAYKKWGDETAVQAHPIDELLKLYVRINAEAET 202 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 D+ + E W ++D +A + + RD+ L N +D D + Sbjct: 203 DPTVDEEARE--------WFRKLEDGDKEATELWQWFRDESLLEFNRLYDQLHVTFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + +++D L + + E SK Q ++++ ++ P Sbjct: 255 GEAFYNDKMDEVLDLLEAKNLLVE-------SKGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370 L KSDG+ Y DLA Y K Y+ F +YV+G++ + + K+L+AV Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKSVYVVGNEQAAHFKQLKAVLKEMGYDWS 354 Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 A +S +K + +LL V + ++ + + V Sbjct: 355 DDMTHVAFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKEAVAHA 413 Query: 417 VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 VG +++F L DFD V + + P YVQYA+AR +SI R+A Sbjct: 414 VGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAD------ 465 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 F + S D ++I + ++PR+I+ + EP +A + +LA F+ + Sbjct: 466 ----FTPSATTTYSLADAESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQSFNKY 521 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++H R + N+ + RL L +A A+++ L ++GV++PNEM Sbjct: 522 YAH------TRILDDNSERDN--RLALCYATATVLKEALRLLGVDAPNEM 563 >gi|168462557|ref|ZP_02696488.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195634216|gb|EDX52568.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 577 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 142/586 (24%), Positives = 239/586 (40%), Gaps = 88/586 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + + V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + S R + + T+ I ++ + N MHVGH R ++GD + F G+ Sbjct: 97 QQALAS----DRLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 V R ++ D G Q L + W +Q N D+ G Y A K+ E Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 202 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278 F E +VK S A + + L DI ++++ + R + + RD + Sbjct: 203 DEAFAERARNYVVKLQSGDAYFREMWRKLV------DITMTQNQITYDRLNVTLTRDDVM 256 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335 + + GI+ K+K + + ++F GD + + K DG Y Y Sbjct: 257 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 315 Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387 D+A K +YE D ++Y + S + V++ V +V + ++L Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 374 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420 +DG P K RAG + L ++DE VG Sbjct: 375 -----KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMSADELEKLANAVGIG 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479 +V++ L + + FD+ + + N Y+QYAY R S+FR+A D+D L Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQAL 481 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 VI E E QL L ++ + P+ + YLYD+A +F G + H Sbjct: 482 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 536 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N + RL+L A + GL+ +G+E+ M Sbjct: 537 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|224583587|ref|YP_002637385.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224468114|gb|ACN45944.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 563 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 141/586 (24%), Positives = 240/586 (40%), Gaps = 88/586 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + + V IAG GFIN++L P++L + + Sbjct: 23 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQV 82 Query: 103 SSIVVSGIEYGRNLIGKGTK--VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + S R + + T+ + +++ + N MHVGH R ++GD + F G+ Sbjct: 83 QQALAS----DRLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 138 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 V R ++ D G Q L + W +Q N D+ G Y A K+ E Sbjct: 139 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 188 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278 F E +VK S A + + L DI ++++ + R + + RD + Sbjct: 189 DEAFAERARNYVVKLQSGDAYFREMWRKLV------DITMTQNQITYDRLNVTLTRDDVM 242 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335 + + GI+ K+K + + ++F GD + + K DG Y Y Sbjct: 243 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 301 Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387 D+A K +YE D ++Y + S + V++ V +V + ++L Sbjct: 302 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 360 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420 +DG P K RAG + L ++DE VG Sbjct: 361 -----KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIG 413 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479 +V++ L + + FD+ + + N Y+QYAY R S+FR+A D+D L Sbjct: 414 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQAL 467 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 VI E E QL L ++ + P+ + YLYD+A +F G + H Sbjct: 468 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 522 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N + RL+L A + GL+ +G+E+ M Sbjct: 523 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 563 >gi|210623510|ref|ZP_03293855.1| hypothetical protein CLOHIR_01805 [Clostridium hiranonis DSM 13275] gi|210153568|gb|EEA84574.1| hypothetical protein CLOHIR_01805 [Clostridium hiranonis DSM 13275] Length = 565 Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 137/564 (24%), Positives = 252/564 (44%), Gaps = 90/564 (15%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119 P IAE I +I+ + V G G++N ++ S L +++ ++ YG++ +GK Sbjct: 53 PNMIAEDIAGKIEPKGSISKVVQLG-GYVNFFVDKSKLAETVINKVLTEKENYGKSELGK 111 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G V ++F S N P H+GH R V+G+ L + GY + R ++ D G Q L + Sbjct: 112 GKTVVVDFSSPNIAKPFHIGHIRTTVIGNALYKIYNSQGYNMVRINHLGDYGTQFGKLIV 171 Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSELLNFPEEKWLPIVK--D 235 + W ++ + +N +PE +Y++ H E+ + E W ++ D Sbjct: 172 AFKLWGDKETVESNP--IPE--LLKLYVRFHDEAEVHPEMEDEA-----RAWFTKLENGD 222 Query: 236 YSVQAMMKIIRDD-LKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGIL 291 +A+ + RD+ LK + +D+ E D + G+ + +ID + +G + E Sbjct: 223 EEAKALWQWFRDESLKEFSRVYDLLDIEFDSYAGESFYSDKMDRVIDLIKEKGLLEE--- 279 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYE 346 S+ T ++D L P L K DGS Y DLA Y K Y+ Sbjct: 280 ----SEGTNIVNLDAYNL------------TPALITKKDGSTLYMTRDLAAAIYRKETYD 323 Query: 347 RGFDNMIYVMGSDHSGYVKRLEAV-----------------------AAAVSEKKAQINV 383 FD +YV+GS + + ++L V + +S +K ++ V Sbjct: 324 --FDKCLYVVGSQQALHFQQLFKVLELMGYEWSKDLVHVPFGMVALESGTMSTRKGRV-V 380 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443 L +++R + + + + + + +VG +V F L NS + D+ F K Sbjct: 381 FLEDVLRQAIEKTKDIILTKNPNAENVDEIAKQVGVGAVVFQEL--SNSRIKDYTFSWDK 438 Query: 444 EQSKENPVF-YVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501 S + YVQY +ARC ++ R+A +++ D+D+ L S+ +SE+ ++ Sbjct: 439 TLSFDGETGPYVQYTHARCCAVLRKANEEVTSDIDYSLL--------SDEGSSEVLKVIE 490 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 + + I + EP+ + ++ DLA F+ + +NP L ++ +L RL Sbjct: 491 --SFNKCILASMKKNEPHIVTRFVLDLAQAFNKFY---HDNPIL----VDDAELRKARLA 541 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 LV A I +GL ++G+ +P++M Sbjct: 542 LVEATRQSIENGLALLGMHAPHKM 565 >gi|322388726|ref|ZP_08062323.1| arginine--tRNA ligase [Streptococcus infantis ATCC 700779] gi|321140345|gb|EFX35853.1| arginine--tRNA ligase [Streptococcus infantis ATCC 700779] Length = 563 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 144/595 (24%), Positives = 256/595 (43%), Gaps = 99/595 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G ++ A L++ P IA I KI+ +A ++N + Sbjct: 26 LLETPKNSDMGDIAF-PAFSLAKVERKAPQMIAADIAE--KINSQAFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + + ++L +++ Y IG V I+ S N P +GH R V+GD+L+ Sbjct: 83 LDKAAISGQVLQNVITEKEHYADQEIGNQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + GY+ + ++ D G Q L ++ W ++A+ + D LK Sbjct: 143 HIFQKIGYKTVKVNHLGDWGKQFGMLIVAYKKWGNEEAVKAHPID--------ELLKLYV 194 Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267 + A+ + L+ +W ++ D A+ + RD+ L N ++ E D + Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELQVEFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + ++D L+ +G + E S+ Q ++++ ++ P Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLVE-------SEGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L KSDG+ Y DLA Y K +Y+ F N IYV+G + S + K+L+AV + + Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FANSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 Q +++ + ++G K+S R G+ I L V E Sbjct: 355 Q-DIVHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAISRAKAQIEAKNPELENKDQVA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +++F L + DFD V + + P YVQYAYAR +SI R+A D P Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKA-DFKP 468 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 + + S D ++I + ++PR+I+ A EP +A + LA F+ Sbjct: 469 EAGANY---------SLNDAESWEIIKLIQDFPRIIKRAADNYEPSIIAKFAISLAQAFN 519 Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R E+P RL L +A A ++ L ++GVE+P +M Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563 >gi|226329867|ref|ZP_03805385.1| hypothetical protein PROPEN_03780 [Proteus penneri ATCC 35198] gi|225200662|gb|EEG83016.1| hypothetical protein PROPEN_03780 [Proteus penneri ATCC 35198] Length = 535 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 141/576 (24%), Positives = 240/576 (41%), Gaps = 89/576 (15%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112 L + +G+ P +AE I+ ++ I D V IAG GFIN++LSP ++ K +V E+ Sbjct: 6 LQKKMGIPPRQLAEKILEKLDITDIADKVEIAGPGFINIFLSPQWVAKQAEDALVD--EH 63 Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172 + + I++ S N MHVGH R ++GD A ++F G+ V R ++ D G Sbjct: 64 LNVTPVEPQTIVIDYSSPNVAKQMHVGHLRSTIIGDASARTLSFLGHNVVRANHLGDWGT 123 Query: 173 QINTLALSVFWRYQQALYNND---SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229 Q L + +Q D SDL E Y A K+ E F E Sbjct: 124 QFGMLI--AYLEKKQNENAADMALSDLEEFYRE-----------AKKHYDEDEVFAERAR 170 Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 +VK S + + L + +Q + + + R + + D I + + G Sbjct: 171 NYVVKLQSGDEYCRTMWRKLVDITMQQN----QATYQRLNVTLTEDDIMGESLYNPMLPG 226 Query: 290 ILPPPKSKTTQKCDMDRKQLLF---RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346 I+ K+K + + ++F G+ + + K DG Y Y D+A K ++E Sbjct: 227 IVADLKAKGL-AVESEGATVVFLDEYKNKEGEPMGVIVQKKDGGYLYTTTDIACAKYRHE 285 Query: 347 R-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 D ++Y + S + V++ + ++S + ++L +DG P Sbjct: 286 TLHADRVLYYIDSRQHQHLMQAWTIVRKAGYIPDSMSLEHHMFGMMLG------KDGRPF 339 Query: 399 KMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMMLWRKN 431 K R+G I L ++DE VG +V++ L + Sbjct: 340 KT--RSGGTIRLTDLLDEAQERARALIAEKNPDMDKDELNNVARVVGIGAVKYADLSKNR 397 Query: 432 SE--LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489 + + D+D E N Y+QYAY R SIF++A D+D + + ++ +S Sbjct: 398 TTDYIFDWDLMLSFEG---NTAPYMQYAYTRVASIFKRA-----DIDENALTQPIVLTQS 449 Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549 E QL + L ++ I + P+ + YLYDLA F G + + P L Sbjct: 450 H----ERQLALRLVQFDETIMQVSREGTPHVMCAYLYDLAQAFSGFYENC---PILSAED 502 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N R+ RL+L A + GL+ +G+E+ + M Sbjct: 503 ENTRQ---SRLKLARLTAKTLKQGLDTLGIETVDRM 535 >gi|259908205|ref|YP_002648561.1| arginyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96] gi|224963827|emb|CAX55329.1| Arginyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96] gi|283478133|emb|CAY74049.1| argS [Erwinia pyrifoliae DSM 12163] Length = 576 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 144/613 (23%), Positives = 242/613 (39%), Gaps = 111/613 (18%) Query: 32 IVIERPRDC----------AHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSV 81 I + P DC G N M +++ LG+ P +AE ++ ++ + V Sbjct: 16 IAVGAPADCEPQVRQSAKAQFGDYQANGIMAVAKNLGMPPRQLAEKVLEQLDLSGIAHKV 75 Query: 82 FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 IAG GFIN++L+P +L + S V++ + G + + T V I++ + N MHVGH Sbjct: 76 DIAGPGFINIFLAPQWLSAQIDS-VLTAPKLGISPVEPKTVV-IDYSAPNVAKEMHVGHV 133 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN---------------TLALS---VFW 183 R ++GD A +AF G++V R ++ D G Q TLAL+ F+ Sbjct: 134 RSTIIGDAAARTLAFLGHKVIRANHVGDWGTQFGMLIAFLEKQQNEHQETLALADLEAFY 193 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 R + Y+ D E V G E K +L++ + I +V Sbjct: 194 REAKRTYDEDPAFAERARGYVVKLQGGDEYCRKMWKQLVDITMTQNQLIYDRMNV----T 249 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 + RDD+ ++ +D+ + I+ +L +G E S+ Sbjct: 250 LARDDVMGESLYNDM--------------LPGIVADLKAKGLAVE-------SEGATVVF 288 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSG 362 +D + G+ + + K DG Y Y D+A K +YE D ++Y + S Sbjct: 289 LDEYK-----NKDGEPMGVIVQKKDGGYLYTTTDIACAKYRYETLKADRVLYYIDSRQHQ 343 Query: 363 YVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416 ++ + + A V E + + + L +DG P K RAG I L ++DE Sbjct: 344 HLMQAWTIVRKAGYVPENIPLEHHMFGMM--LGKDGKPFK--TRAGGTIKLSDLLDEAID 399 Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 VG +V++ L + + FD+ + + N Sbjct: 400 RATRLVAEKNPDMPAGELKALANIVGIGAVKYADLSKSRTTDYIFDWDNMLA-FEGNTAP 458 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 Y+QYAY R S+FR+A + V + E L V L ++ I Sbjct: 459 YMQYAYTRVLSVFRKA---------GIDAEAVSGTTRIIEDREAALAVRLLQFDETITQV 509 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572 P+ + YLYDLA +F G + H + A + RL+L A + Sbjct: 510 ARDGMPHVMCAYLYDLAGLFSGFYEH------CPILNAEDEATKQSRLRLALLTAKTLKQ 563 Query: 573 GLNIIGVESPNEM 585 GL+ +G+ + M Sbjct: 564 GLDTLGIATVERM 576 >gi|315612289|ref|ZP_07887203.1| arginine--tRNA ligase [Streptococcus sanguinis ATCC 49296] gi|315315682|gb|EFU63720.1| arginine--tRNA ligase [Streptococcus sanguinis ATCC 49296] Length = 563 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 144/595 (24%), Positives = 251/595 (42%), Gaps = 99/595 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G ++ A L++ P IA I KI+ +A ++N + Sbjct: 26 LLETPKNSEMGDIAF-PAFSLAKVERKAPQMIATDIAE--KINSQAFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + ++L ++ Y IGK + I+ S N P +GH R V+GD+L+ Sbjct: 83 LDKSAISAQVLQDVITEKEHYADQTIGKQENIVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + GY+ + ++ D G Q L ++ W ++A+ + D LK Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGNEEAVKAHPID--------ELLKLYV 194 Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267 + A+ L+ +W ++ D A+ + RD+ L N ++ E D + Sbjct: 195 RINAEAEKDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELQVEFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + ++D A +G + E S+ Q ++++ ++ P Sbjct: 255 GEAFYNDKMDAVVDIFAEKGLLVE-------SEGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L KSDG+ Y DLA Y K +Y+ F IYV+G + S + K+L+AV + + Sbjct: 297 LIKKSDGATLYITRDLAAALYRKKEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 Q +++ + ++G K+S R G+ I L + E Sbjct: 355 Q-DIVHVPFGLVTKEGK--KLSTRKGNVILLEPTIAEAVSRAKAQIEAKNPELENKDQVA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +++F L + DFD V + + P YVQYAYAR +SI R+A D P Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKA-DFKP 468 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 D S D ++I + ++PR+I A EP +A + LA F+ Sbjct: 469 D---------TASNYSLNDAESWEIIKLIQDFPRIINRAADNFEPSIIAKFAIGLAQAFN 519 Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R E+P RL L +A A ++ L ++GVE+P +M Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563 >gi|76787802|ref|YP_330632.1| arginyl-tRNA synthetase [Streptococcus agalactiae A909] gi|109895042|sp|Q3JYM1|SYR_STRA1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|76562859|gb|ABA45443.1| arginyl-tRNA synthetase [Streptococcus agalactiae A909] Length = 563 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 141/588 (23%), Positives = 254/588 (43%), Gaps = 85/588 (14%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ + G L+ A L++ L P IA I +IK D + V G ++N + Sbjct: 26 LLETPKNSSMGDLAF-PAFSLAKTLRKAPQIIASDIAEQIKSD-QFEKVEAVGP-YVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + + ++L ++ G Y IG+G V I+ S N P +GH R V+GD+LA Sbjct: 83 LDKAAISSQVLKQVLSDGSAYATQNIGEGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY + ++ D G Q L ++ W ++A+ + D Y + + Sbjct: 143 NIFDKIGYHPVKINHLGDWGKQFGMLIVAYKKWGNEEAVRAHPIDELLKLYVRINAEAET 202 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHRGD 269 D+ + E E D + + RD+ L N +D D + G+ Sbjct: 203 DPSVDEEAREWFRKLE------ANDPEATELWQWFRDESLLEFNRLYDKMNVTFDSYNGE 256 Query: 270 P---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL- 325 + ++++ L + + E SK Q ++++ ++ P L Sbjct: 257 AFYNDKMEEVLELLESKNLLVE-------SKGAQVVNLEKY-----------GIEHPALI 298 Query: 326 -KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV----------- 370 KSDG+ Y DLA Y + Y+ F IYV+G++ S + K+L+AV Sbjct: 299 KKSDGATLYITRDLAAALYRRRTYD--FAKSIYVVGNEQSAHFKQLKAVLKEMDYDWSDD 356 Query: 371 ------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 A +S +K + +LL V + ++ + + V VG Sbjct: 357 MTHVPFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKDKVAQAVG 415 Query: 419 SDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 +++F L + DFD V + + P YVQYA+AR +SI R+A F + Sbjct: 416 VGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAN--FNPSNS 471 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 D + N D ++I + ++PR+I A EP +A + +LA F+ +++ Sbjct: 472 DNYSLN--------DVESWEIIKLIQDFPRIIVRAADNFEPSIIAKFAINLAQCFNKYYA 523 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H R + + +++ RL L +A A+++ L ++GV++PNEM Sbjct: 524 HTR-------ILDEDAEISS-RLALCYATATVLKESLRLLGVDAPNEM 563 >gi|251783482|ref|YP_002997787.1| arginyl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242392114|dbj|BAH82573.1| arginyl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 563 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 138/594 (23%), Positives = 256/594 (43%), Gaps = 97/594 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G L+ A L++ L P IA + +I D +A +IN + Sbjct: 26 LLETPKNSDMGDLAF-PAFSLAKVLRKAPQMIAGELAEQI--DGSQFEKVVAVGPYINFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + + ++L ++ +G +Y + G+G V I+ S N P +GH R V+GD+LA Sbjct: 83 LDKAKISSQVLEQVITAGSDYAQQDEGQGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ A GY+ + ++ D G Q L ++ W + A+ + D Y + + Sbjct: 143 NIFAKMGYQPVKINHLGDWGKQFGMLIVAYKKWGDEAAVQAHPIDELLKLYVRINAEAET 202 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD--------LKALNIQHDIFI 260 D+ + E W ++D +A + + RD+ LN+ D + Sbjct: 203 DPTVDEEARE--------WFRKLEDGDKEATELWQWFRDESLLEFNRLYNQLNVTFDSYN 254 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 E ++ + ++++ L + + E SK Q ++++ + Sbjct: 255 GEAFYN----DKMDEVLELLEAKNLLVE-------SKGAQVVNLEKY-----------GI 292 Query: 321 DRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV----- 370 + P L KSDG+ Y DLA Y K Y+ F +YV+G++ + + K+L+AV Sbjct: 293 EHPALIKKSDGATLYITRDLAAALYRKRTYD--FAKSVYVVGNEQAAHFKQLKAVLKEMG 350 Query: 371 ------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412 A +S +K + +LL V + ++ + + Sbjct: 351 YDWSDDMTHVAFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKEA 409 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 V VG +++F L DFD V + + P YVQYA+AR +SI R+A Sbjct: 410 VAHAVGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAD-- 465 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 F + S D ++I + ++PR+I+ + EP +A + +LA Sbjct: 466 --------FTPSTTTTYSLADAESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQS 517 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ +++H R + N+ + + RL L +A A+++ L ++GVE+PNEM Sbjct: 518 FNKYYAH------TRILDDNSERDS--RLALCYATATVLKEALRLLGVEAPNEM 563 >gi|311279226|ref|YP_003941457.1| arginyl-tRNA synthetase [Enterobacter cloacae SCF1] gi|308748421|gb|ADO48173.1| arginyl-tRNA synthetase [Enterobacter cloacae SCF1] Length = 577 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 146/591 (24%), Positives = 245/591 (41%), Gaps = 98/591 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE +++ + ++ V IAG GFIN++L P++ L Sbjct: 37 GDYQANGVMAVAKKLGMAPRQLAEQVLSHLDLNGIASKVEIAGPGFINIFLDPAF----L 92 Query: 103 SSIVVSGIEYGRNLIGK--GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 +S V + + R + K V I++ + N MHVGH R ++GD F G++ Sbjct: 93 ASHVDAALASDRLGVAKQPAQTVVIDYSAPNVAKEMHVGHVRSTIIGDASVRTQEFLGHK 152 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADK 216 V R ++ D G Q L + W +Q N SDL EG+Y A K Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQQENAGEMALSDL-EGFYRD----------AKK 198 Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIR 274 + E F E +VK +Q + R+ + L DI ++++ + R + + R Sbjct: 199 HYDEDEAFAERARGYVVK---LQGGDEYCREMWRKLV---DITMTQNQITYERLNVTLTR 252 Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSY 331 D + + + GI+ K+K + + ++F G+ + + K DG Y Sbjct: 253 DDVMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEAMGVIIQKKDGGY 311 Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINV 383 Y D+A K +YE D ++Y + S + V++ V +V + + Sbjct: 312 LYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGM 371 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416 +L +DG P K RAG I L ++DE Sbjct: 372 MLG------KDGKPFK--TRAGGTIKLSELLDEALDRARRLVAEKNPDMPADELEKLANA 423 Query: 417 VGSDSVRFMMLWRKNSE--LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 VG +V++ L + + + D+D E N Y+QYAY R S+FR+A Sbjct: 424 VGIGAVKYADLSKSRTTDYIFDWDLMLAFEG---NTAPYMQYAYTRVLSVFRKAG----I 476 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 + L VI E E QL L ++ + P+ + YLYDLA +F G Sbjct: 477 EESALASAAVIISEDR----EAQLAARLLQFEETLTVVARDGTPHVMCAYLYDLAGLFSG 532 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + H + A++ + RL+L A + GL+ +G+E+ M Sbjct: 533 FYEH------CPILSADSEAVRNSRLKLALLTAKTLKLGLDTLGIETVERM 577 >gi|205352385|ref|YP_002226186.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|238690484|sp|B5R8C8|SYR_SALG2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|205272166|emb|CAR37024.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326627437|gb|EGE33780.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 577 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 143/586 (24%), Positives = 240/586 (40%), Gaps = 88/586 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + + V IAG GFIN++L P++ L Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAF----L 92 Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 S V + R + + T+ I ++ + N MHVGH R ++GD + F G+ Sbjct: 93 SEQVQQALTSDRLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 V R ++ D G Q L + W +Q N D+ G Y A K+ E Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 202 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278 F E +VK +Q+ R+ + L DI ++++ + R + + RD + Sbjct: 203 DEAFAERARNYVVK---LQSGDTYFREMWRKLV---DITMTQNQITYDRLNVTLTRDDVM 256 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335 + + GI+ K+K + + ++F GD + + K DG Y Y Sbjct: 257 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 315 Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387 D+A K +YE D ++Y + S + V++ V +V + ++L Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 374 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420 +DG P K RAG + L ++DE VG Sbjct: 375 -----KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMSADELEKLANAVGIG 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479 +V++ L + + FD+ + + N Y+QYAY R S+FR+A D+D L Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQAL 481 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 VI E E QL L ++ + P+ + YLYD+A +F G + H Sbjct: 482 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 536 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N + RL+L A + GL+ +G+E+ M Sbjct: 537 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|149412502|ref|XP_001509403.1| PREDICTED: similar to arginyl-tRNA synthetase [Ornithorhynchus anatinus] Length = 691 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 145/589 (24%), Positives = 260/589 (44%), Gaps = 84/589 (14%) Query: 43 GHLSTNAAMILSRPL------GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS 96 G N+AM +++ L + P IAE I + + +D V IAG GFIN++LS S Sbjct: 141 GDYQCNSAMSITQMLQKTKEQKVSPREIAEKITKNLPDNDYIDKVEIAGPGFINVHLSKS 200 Query: 97 YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 ++ K L++++V+G++ +G+ KV ++F S N MHVGH R ++GD++ L F Sbjct: 201 FVSKQLTNLLVNGVQ--PPALGEIKKVVVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEF 258 Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELA 214 GY+V R ++ D G Q L + ++ L + DL + +Y + +E Sbjct: 259 VGYDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEF 317 Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---S 271 K + + + + K I K + + + + R + + DI I E RG+ Sbjct: 318 KKRAYQCVVLLQSKTPEITKAWKM--ICDVSRQEFNKIYDALDISIIE----RGESFYQD 371 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + D++ +G+V + D D ++++F + G V ++KSDG Y Sbjct: 372 RMNDVVKEFEDRGFV--------------EVD-DGRKIVF---VPGCPVPLTIVKSDGGY 413 Query: 332 TYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV-----SEKK---AQIN 382 TY +DLA K + +E + +IYV+ S S +++ + A A + E + A Sbjct: 414 TYDTSDLAAIKQRLFEEKANIIIYVVDSGQSVHLQTVFAAAKMIGWYDPQETRVVHAGFG 473 Query: 383 VLLCE--------------LVRLYRDGMPIKMSK---RAGDFI----TLRHVVDEVGSDS 421 V+L E L+ L +G+ M K + D + LR V Sbjct: 474 VVLGEDKKKFKTRSGDTVRLIDLLEEGLKRSMDKLKEKERDKVLTPEELRTAQTSVAFGC 533 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 +++ L F F K+ + + N Y+ YA+ R RSI R A ++D ++ Sbjct: 534 IKYADLSHNRMNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEEMLR 587 Query: 482 RNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG- 539 + E D E +L + +P +++ + L Y+Y+LA+ F + Sbjct: 588 KAAQETEILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATTFTEFYDSCY 647 Query: 540 ---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + V+ N M R+ L A A+I+ G +I+G++ M Sbjct: 648 CVEKDRQTGKIVKVN-----MWRMLLCEATAAIMAKGFDILGIKPVQRM 691 >gi|319745997|gb|EFV98279.1| arginine--tRNA ligase [Streptococcus agalactiae ATCC 13813] Length = 574 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 142/588 (24%), Positives = 254/588 (43%), Gaps = 85/588 (14%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ + G L+ A L++ L P IA I +IK D + V G ++N + Sbjct: 37 LLETPKNSSMGDLAF-PAFSLAKILRKAPQIIASDIAEQIKSD-QFEKVEAVGP-YVNFF 93 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + + ++L ++ G Y IG+G V I+ S N P +GH R V+GD+LA Sbjct: 94 LDKAAISSQVLKQVLSDGSAYATQNIGEGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 153 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY + ++ D G Q L ++ W ++A+ + D Y + + Sbjct: 154 NIFDKIGYHPVKINHLGDWGKQFGMLIVAYKKWGNEEAVRAHPIDELLKLYVRINAEAET 213 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHRGD 269 D+ + E E D + + RD+ L N +D D + G+ Sbjct: 214 DPSVDEEAREWFRKLE------ANDPEATELWQWFRDESLLEFNRLYDKMNVTFDSYNGE 267 Query: 270 P---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL- 325 + ++++ L + + E SK Q ++++ ++ P L Sbjct: 268 AFYNDKMDEVLELLESKNLLVE-------SKGAQVVNLEKY-----------GIEHPALI 309 Query: 326 -KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV----------- 370 KSDG+ Y DLA Y K Y+ F IYV+G++ S + K+L+AV Sbjct: 310 KKSDGATLYITRDLAAALYRKRTYD--FAKSIYVVGNEQSAHFKQLKAVLKEMDYDWSDD 367 Query: 371 ------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 A +S +K + +LL V + ++ + + V VG Sbjct: 368 MTHVPFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKDKVAQAVG 426 Query: 419 SDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 +++F L + DFD V + + P YVQYA+AR +SI R+A F + Sbjct: 427 VGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAN--FNPSNS 482 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 D + N D ++I + ++PR+I A EP +A + +LA F+ +++ Sbjct: 483 DNYSLN--------DVESWEIIKLIQDFPRIIVRAADNFEPSIIAKFAINLAQCFNKYYA 534 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H R + + +++ RL L +A A+++ L ++GV++PNEM Sbjct: 535 HTR-------ILDEDAEISS-RLALCYATATVLKESLRLLGVDAPNEM 574 >gi|15675893|ref|NP_270067.1| arginyl-tRNA synthetase [Streptococcus pyogenes M1 GAS] gi|94989449|ref|YP_597550.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS9429] gi|139474582|ref|YP_001129298.1| arginyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo] gi|161936118|ref|YP_283171.2| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS5005] gi|23822204|sp|Q99XL5|SYR_STRP1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|123258095|sp|Q1JJG7|SYR_STRPC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|166232847|sp|A2RGX5|SYR_STRPG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|13623129|gb|AAK34788.1| putative arginyl-tRNA synthetase [Streptococcus pyogenes M1 GAS] gi|94542957|gb|ABF33006.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS9429] gi|134272829|emb|CAM31107.1| arginyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo] gi|323128228|gb|ADX25525.1| arginyl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 563 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 139/590 (23%), Positives = 255/590 (43%), Gaps = 89/590 (15%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G L+ A L++ L P IA + +I + + V G +IN + Sbjct: 26 LLETPKNSDMGDLAF-PAFSLAKVLRKAPQMIASELAEQID-ESQFEKVVAVGP-YINFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + + ++L ++ +G +Y + G+G V I+ S N P +GH R V+GD+LA Sbjct: 83 LDKAKISSQVLEQVITAGSDYAQQDEGQGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + A GY+ + ++ D G Q L ++ W + A+ + D Y + + Sbjct: 143 HIFAKMGYKPVKINHLGDWGKQFGMLIVAYKKWGDEAAVQAHPIDELLKLYVRINAEAET 202 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 D+ + E W ++D +A + + RD+ L N +D D + Sbjct: 203 DPTVDEEARE--------WFRKLEDGDKEATELWQWFRDESLLEFNRLYDQLHVTFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + +++D L + + E SK Q ++++ ++ P Sbjct: 255 GEAFYNDKMDEVLDLLEAKNLLVE-------SKGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370 L KSDG+ Y DLA Y K Y+ F +YV+G++ + + K+L+AV Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKSVYVVGNEQAAHFKQLKAVLKEMGYDWS 354 Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 A +S +K + +LL V + ++ + + V Sbjct: 355 DDMTHVAFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKEAVAHA 413 Query: 417 VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 VG +++F L DFD V + + P YVQYA+AR +SI R+A Sbjct: 414 VGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAD------ 465 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 F + S D ++I + ++PR+I+ + EP +A + +LA F+ + Sbjct: 466 ----FTPSATTTYSLADAESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQSFNKY 521 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++H R + N+ + RL L +A A+++ L ++GV++PNEM Sbjct: 522 YAH------TRILDDNSERDN--RLALCYATATVLKEALRLLGVDAPNEM 563 >gi|168820735|ref|ZP_02832735.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|197248879|ref|YP_002146112.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|238912513|ref|ZP_04656350.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|238690037|sp|B5F3I0|SYR_SALA4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|197212582|gb|ACH49979.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|205342662|gb|EDZ29426.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320085472|emb|CBY95253.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322616909|gb|EFY13817.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618147|gb|EFY15039.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625818|gb|EFY22637.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626270|gb|EFY23080.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632684|gb|EFY29429.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322639028|gb|EFY35721.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640468|gb|EFY37121.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646023|gb|EFY42540.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649555|gb|EFY45987.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655463|gb|EFY51771.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660242|gb|EFY56480.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662923|gb|EFY59130.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668108|gb|EFY64267.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674132|gb|EFY70226.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675514|gb|EFY71588.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683072|gb|EFY79088.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686766|gb|EFY82744.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323195343|gb|EFZ80523.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199235|gb|EFZ84330.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204040|gb|EFZ89055.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207491|gb|EFZ92439.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210677|gb|EFZ95555.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217475|gb|EGA02194.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221966|gb|EGA06356.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224424|gb|EGA08712.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231497|gb|EGA15610.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235939|gb|EGA20018.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240509|gb|EGA24552.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245401|gb|EGA29401.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323250172|gb|EGA34064.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253620|gb|EGA37448.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323260282|gb|EGA43903.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266873|gb|EGA50359.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269079|gb|EGA52535.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 577 Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 142/586 (24%), Positives = 239/586 (40%), Gaps = 88/586 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + + V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + S R + + T+ I ++ + N MHVGH R ++GD + F G+ Sbjct: 97 QQALAS----ERLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 V R ++ D G Q L + W +Q N D+ G Y A K+ E Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 202 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278 F E +VK S A + + L DI ++++ + R + + RD + Sbjct: 203 DEAFAERARNYVVKLQSGDAYFREMWRKLV------DITMTQNQITYDRLNVTLTRDDVM 256 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335 + + GI+ K+K + + ++F GD + + K DG Y Y Sbjct: 257 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 315 Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387 D+A K +YE D ++Y + S + V++ V +V + ++L Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 374 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420 +DG P K RAG + L ++DE VG Sbjct: 375 -----KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIG 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479 +V++ L + + FD+ + + N Y+QYAY R S+FR+A D+D L Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQAL 481 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 VI E E QL L ++ + P+ + YLYD+A +F G + H Sbjct: 482 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 536 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N + RL+L A + GL+ +G+E+ M Sbjct: 537 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|194443417|ref|YP_002041175.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|238693529|sp|B4SVG0|SYR_SALNS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|194402080|gb|ACF62302.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 577 Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 141/586 (24%), Positives = 242/586 (41%), Gaps = 88/586 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + + V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQV 96 Query: 103 SSIVVSGIEYGRNLIGKGTK--VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + S R + + T+ + +++ + N MHVGH R ++GD + F G+ Sbjct: 97 QQALAS----DRLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 V R ++ D G Q L + W +Q N D+ G Y A K+ E Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 202 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278 F E +VK +Q+ R+ + L DI ++++ + R + + RD + Sbjct: 203 DEAFAERARNYVVK---LQSGDTYFREMWRKLV---DITMTQNQITYDRLNVTLTRDDVM 256 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335 + + GI+ K+K + + ++F GD + + K DG Y Y Sbjct: 257 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 315 Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387 D+A K +YE D ++Y + S + V++ V +V + ++L Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 374 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420 +DG P K RAG + L ++DE VG Sbjct: 375 -----KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIG 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479 +V++ L + + FD+ + + N Y+QYAY R S+FR+A D+D L Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQAL 481 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 VI E E QL L ++ + P+ + YLYD+A +F G + H Sbjct: 482 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 536 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N + RL+L A + GL+ +G+E+ M Sbjct: 537 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|77408152|ref|ZP_00784898.1| arginyl-tRNA synthetase [Streptococcus agalactiae COH1] gi|77173252|gb|EAO76375.1| arginyl-tRNA synthetase [Streptococcus agalactiae COH1] Length = 563 Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 142/588 (24%), Positives = 254/588 (43%), Gaps = 85/588 (14%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ + G L+ A L++ L P IA I +IK D + V G ++N + Sbjct: 26 LLETPKNSSMGDLAF-PAFSLAKTLRKAPQIIASDIAEQIKSD-QFEKVEAVG-SYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + + ++L ++ G Y IG+G V I+ S N P +GH R V+GD+LA Sbjct: 83 LDKAAISSQVLKQVLSDGSAYATQNIGEGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY + ++ D G Q L ++ W ++A+ + D Y + + Sbjct: 143 NIFDKIGYHPVKINHLGDWGKQFGMLIVAYKKWGNEEAVRAHPIDELLKLYVRINAEAEI 202 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHRGD 269 D+ + E E D + + RD+ L N +D D + G+ Sbjct: 203 DPSVDEEAREWFRKLE------ANDPEATELWQWFRDESLLEFNRLYDKMNVTFDSYNGE 256 Query: 270 P---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL- 325 + ++++ L + + E SK Q ++++ ++ P L Sbjct: 257 AFYNDKMDEVLELLESKNLLVE-------SKGAQVVNLEKY-----------GIEHPALI 298 Query: 326 -KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV----------- 370 KSDG+ Y DLA Y K Y+ F IYV+G++ S + K+L+AV Sbjct: 299 KKSDGATLYITRDLAAALYRKRTYD--FAKSIYVVGNEQSAHFKQLKAVLKEMDYDWSDD 356 Query: 371 ------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 A +S +K + +LL V + ++ + + V VG Sbjct: 357 MTHVPFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKDKVAQAVG 415 Query: 419 SDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 +++F L + DFD V + + P YVQYA+AR +SI R+A F + Sbjct: 416 VGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAN--FNPSNS 471 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 D + N D ++I + ++PR+I A EP +A + +LA F+ +++ Sbjct: 472 DNYSLN--------DVESWEIIKLIQDFPRIIVRAADNFEPSIIAKFAINLAQCFNKYYA 523 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H R + + +++ RL L +A A+++ L ++GV++PNEM Sbjct: 524 HTR-------ILDEDAEISS-RLALCYATATVLKESLRLLGVDAPNEM 563 >gi|200390366|ref|ZP_03216977.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|207856570|ref|YP_002243221.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|238690436|sp|B5R142|SYR_SALEP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|199602811|gb|EDZ01357.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|206708373|emb|CAR32677.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 577 Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 142/586 (24%), Positives = 241/586 (41%), Gaps = 88/586 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + + V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + S R + + T+ I ++ + N MHVGH R ++GD + F G+ Sbjct: 97 QQALTS----DRLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 V R ++ D G Q L + W +Q N D+ G Y A K+ E Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 202 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278 F E +VK +Q+ R+ + L DI ++++ + R + + RD + Sbjct: 203 DEAFAERARNYVVK---LQSGDTYFREMWRKLV---DITMTQNQITYDRLNVTLTRDDVM 256 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335 + + GI+ K+K + + ++F GD + + K DG Y Y Sbjct: 257 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 315 Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387 D+A K +YE D ++Y + S + V++ V +V + ++L Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 374 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420 +DG P K RAG + L ++DE VG Sbjct: 375 -----KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMSADELEKLANAVGIG 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479 +V++ L + + FD+ + + N Y+QYAY R S+FR+A D+D L Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQAL 481 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 VI E E QL L ++ + P+ + YLYD+A +F G + H Sbjct: 482 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 536 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N + RL+L A + GL+ +G+E+ M Sbjct: 537 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|161613533|ref|YP_001587498.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|197263437|ref|ZP_03163511.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|189083546|sp|A9MUA9|SYR_SALPB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|161362897|gb|ABX66665.1| hypothetical protein SPAB_01253 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|197241692|gb|EDY24312.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] Length = 577 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 142/586 (24%), Positives = 241/586 (41%), Gaps = 88/586 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + + V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + S R + + T+ I ++ + N MHVGH R ++GD + F G+ Sbjct: 97 QQALAS----DRLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 V R ++ D G Q L + W +Q N D+ G Y A K+ E Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 202 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278 F E +VK +Q+ R+ + L DI ++++ + R + + RD + Sbjct: 203 DEAFAERARNYVVK---LQSGDTYFREMWRKLV---DITMTQNQITYDRLNVTLTRDDVM 256 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335 + + GI+ K+K + + ++F GD + + K DG Y Y Sbjct: 257 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 315 Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387 D+A K +YE D ++Y + S + V++ V +V + ++L Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 374 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420 +DG P K RAG + L ++DE VG Sbjct: 375 -----KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMSADELEKLANAVGIG 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479 +V++ L + + FD+ + + N Y+QYAY R S+FR+A D+D L Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQAL 481 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 VI E E QL L ++ + P+ + YLYD+A +F G + H Sbjct: 482 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 536 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N + RL+L A + GL+ +G+E+ M Sbjct: 537 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|24375609|ref|NP_719652.1| arginyl-tRNA synthetase [Shewanella oneidensis MR-1] gi|38372524|sp|Q8E9Y7|SYR_SHEON RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|24350506|gb|AAN57096.1|AE015843_8 arginyl-tRNA synthetase [Shewanella oneidensis MR-1] Length = 581 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 150/610 (24%), Positives = 258/610 (42%), Gaps = 112/610 (18%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 RI ++R +D +HG L+TN AM+L++ G +P +A+LI+ + V V IAG GFIN Sbjct: 29 RIQVDRTKDKSHGDLATNVAMMLTKAAGKNPRELAQLIIDNLPASAYVAKVEIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEY-GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 ++ S L L + + G E+ G L T V +++ S N MHVGH R ++GD+ Sbjct: 89 FFIDDSALANQLQAAI--GDEHLGIKLPAPQTVV-VDYSSPNLAKEMHVGHLRSTIIGDS 145 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 + + F G++V R+ ++ D G Q L Y + L + + + Sbjct: 146 VVRTLEFLGHKVIRQNHVGDWGTQFGML-----LAYMEELRAANGEQAQ----------- 189 Query: 210 GKELADK---YSSELLNFPEEKWLPIVKDYSVQAMM-------KIIRD--DLKALNIQHD 257 EL+D Y + L F E V A+ K+ R+ D+ +L+ H+ Sbjct: 190 -LELSDLETFYRAAKLRFDESAEFATRARQLVVALQSGDEYCNKLWREFNDI-SLSHCHE 247 Query: 258 IF------ISEDDFHRGDP--SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 ++ ++ D H + + ++++LA +G + E + ++ Sbjct: 248 VYERLGVSLTRADVHGESAYNADLEQVVNDLAAKGLLTES---------------NGAKV 292 Query: 310 LFRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMG---SDHSG 362 +F+ T G+ + + K+DG Y Y DLA + + D ++Y + + H Sbjct: 293 VFQEEFRTKEGEPLPVIIQKADGGYLYATTDLAAMRYRSNVLKADRVLYFVDLRQALHFQ 352 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------ 416 V L +A V E + ++ + DG P K R G + L ++DE Sbjct: 353 QVFSLAKLAKFVREDMSLEHLGFGTMNG--EDGRPFKT--RTGGVVKLVDLLDEANTRAL 408 Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455 VG +V++ L + + F F ++ + N Y+ Sbjct: 409 ELVRSKNPDMDEATLAEIARVVGISAVKYADLSKNRTSDYIFSFEQML-SFEGNTAPYLL 467 Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515 YAY R IF++A D+ DL + V+ E E D LA++ ++ Sbjct: 468 YAYTRVAGIFKRATDV--DLS---QAKIVLEHEKEKDLGN-----KLAQFGEILSRVVDK 517 Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575 +P+ L YLY+LA F + P L A+N + RL L AS + GLN Sbjct: 518 GQPHVLCGYLYELAGAFSSFY---EACPVL---AADNDEQKHSRLLLSQLTASTLQKGLN 571 Query: 576 IIGVESPNEM 585 ++G+E+ M Sbjct: 572 LLGIETLERM 581 >gi|313836272|gb|EFS73986.1| arginyl-tRNA synthetase [Propionibacterium acnes HL037PA2] gi|314928737|gb|EFS92568.1| arginyl-tRNA synthetase [Propionibacterium acnes HL044PA1] gi|314971227|gb|EFT15325.1| arginyl-tRNA synthetase [Propionibacterium acnes HL037PA3] gi|328906514|gb|EGG26289.1| arginine--tRNA ligase [Propionibacterium sp. P08] Length = 556 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 143/571 (25%), Positives = 246/571 (43%), Gaps = 73/571 (12%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH +N A+ L++ P +A IVA++ ++ ++ IAG GFINL L L ++ Sbjct: 31 GHFQSNVALRLAKEEKRPPRDVAADIVAKLDVEDLCETPDIAGPGFINLRLRSDVLARVA 90 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 S + ++ G + + +V I++ + N MHVGH R ++GD +++ G+ V Sbjct: 91 SDL-ITDPNIGITQVEEPQRVVIDYSAPNVAKQMHVGHLRSTIIGDCFNRVLSAQGHTVI 149 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV--YLKHVGK------ELA 214 + ++ D G Q L + + N DL E PGV K K E A Sbjct: 150 PQNHLGDWGTQFGMLV--------EYIVENRMDLSEFDLPGVEQLYKDAKKTFDADPEFA 201 Query: 215 DKYSSEL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 D+ + L +E+ L I + ++ + + A+ + + +++DD G+ + Sbjct: 202 DRARRRVVKLQGGDEETLRIWR-----TLIDVSLEGFNAVYARLSVLLTDDDVA-GESTY 255 Query: 273 IRD---IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 D ++D L G E D L + G D + K DG Sbjct: 256 NDDLPRVVDELEADGLAVE----------------DNGALCV--FVEGQDAPMIVRKRDG 297 Query: 330 SYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLC 386 + Y A DLA + + + D +IYV S + + L VA A + + Sbjct: 298 GFGYDATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAGFLPDDVETQHVGY 357 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML----WRKNSELLDFDFCKV 442 +V L DG P K R G ++L ++DE + + + L + S L D+ Sbjct: 358 GMV-LGPDGRPFKT--REGGTVSLWSLLDEAETHAAPNIALAAIKYADLSTGLQKDYVFD 414 Query: 443 KE---QSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEFDTS 494 E Q+ + Y+QYA+AR I R+A D+ P+ D D I E + Sbjct: 415 AERMVQTTGDTGPYLQYAHARVSQILRKAAAEANPDVDPEADLDAMVWGRISVLDE--PA 472 Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554 E QL + L+++ V+E P+KL YLY+LA + + + P LR + + Sbjct: 473 EQQLALLLSQFGEVVELVAQDLTPHKLCTYLYELAGAYSVFYE---QCPVLR----STGE 525 Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL L A ++ GL+++G+++P+ M Sbjct: 526 VRGSRLALCAATRRVLGRGLDLLGIDAPDRM 556 >gi|191168079|ref|ZP_03029878.1| arginyl-tRNA synthetase [Escherichia coli B7A] gi|300924967|ref|ZP_07140893.1| arginyl-tRNA synthetase [Escherichia coli MS 182-1] gi|301327666|ref|ZP_07220873.1| arginyl-tRNA synthetase [Escherichia coli MS 78-1] gi|307314212|ref|ZP_07593822.1| arginyl-tRNA synthetase [Escherichia coli W] gi|309796014|ref|ZP_07690427.1| arginyl-tRNA synthetase [Escherichia coli MS 145-7] gi|190901877|gb|EDV61627.1| arginyl-tRNA synthetase [Escherichia coli B7A] gi|300418879|gb|EFK02190.1| arginyl-tRNA synthetase [Escherichia coli MS 182-1] gi|300845761|gb|EFK73521.1| arginyl-tRNA synthetase [Escherichia coli MS 78-1] gi|306906181|gb|EFN36699.1| arginyl-tRNA synthetase [Escherichia coli W] gi|308120464|gb|EFO57726.1| arginyl-tRNA synthetase [Escherichia coli MS 145-7] gi|315061182|gb|ADT75509.1| arginyl-tRNA synthetase [Escherichia coli W] gi|323378241|gb|ADX50509.1| arginyl-tRNA synthetase [Escherichia coli KO11] Length = 577 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 144/585 (24%), Positives = 247/585 (42%), Gaps = 86/585 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLADHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + S R + K I ++ + N MHVGH R ++GD + F G++ Sbjct: 97 QQALAS----DRLDVATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHK 152 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADK 216 V R ++ D G Q L + W +Q N +DL EG+Y A K Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKK 198 Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIR 274 + E F E +VK +Q+ + R+ + L DI ++++ + R + + R Sbjct: 199 HYDEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTR 252 Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSY 331 D + + + GI+ K+K + + ++F G+ + + K DG Y Sbjct: 253 DDVMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGY 311 Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCE 387 Y D+A K +YE D ++Y + S ++ + A+ A V E + + Sbjct: 312 LYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGM 371 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420 + L +DG P K RAG + L ++DE VG Sbjct: 372 M--LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIG 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +V++ L + + FD+ + + N Y+QYAY R S+FR+A +I + L Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLA 482 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 483 AAPVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH-- 536 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 ----CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|170077224|ref|YP_001733862.1| arginyl-tRNA synthetase [Synechococcus sp. PCC 7002] gi|238692817|sp|B1XPX8|SYR_SYNP2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|169884893|gb|ACA98606.1| arginyl-tRNA synthetase [Synechococcus sp. PCC 7002] Length = 585 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 156/595 (26%), Positives = 247/595 (41%), Gaps = 101/595 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G +N A+ L++ L +P IA+ I+ + I ++ IAG GFIN L PSYL +L Sbjct: 40 GDYQSNVALSLTKILKKNPREIAQSIIEALDIADTCENPTIAGPGFINFSLKPSYLATLL 99 Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 + S IE N KV ++F S N MHVGH R ++GD++A ++ F G Sbjct: 100 KEVQQSDRLAIEPAEN----PQKVIVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFRGQ 155 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 +V R ++ D G Q L + Y AL D+ L G Y K A Sbjct: 156 DVLRLNHVGDWGTQFGMLITYLKEVYPDALTKADA-LDIGDLVAFYKK------AKVRFD 208 Query: 220 ELLNFPEEKWLPIVK----DYSVQAMMKII----RDDLKALNIQHDIFISEDDFHRGDP- 270 E F E +VK D Q +++ R + + + DI ++E RG+ Sbjct: 209 EDEAFKEASRNQVVKLQSGDEESQKAWQLLCEQSRREFQKIYDILDIKLTE----RGESF 264 Query: 271 -SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLL-- 325 +P + D++ L G + E Q +F D DR PL+ Sbjct: 265 YNPYLADVLTALDEVGLLEEDA---------------GAQCVFLEGFKNKDGDRLPLIVQ 309 Query: 326 KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 KSDG + Y DLA + + E +IYV S +G+ ++ VA + V+ Sbjct: 310 KSDGGFNYATTDLAAIRYRIKEDQAKRIIYVTDSGQAGHFAQVFQVAERAGFLPDDVEVV 369 Query: 385 LCELVRLY-RDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416 + DG K+ RAGD I L+ ++DE Sbjct: 370 HVPFGLVQGEDGK--KLKTRAGDTIKLKDLLDEAVNRSRADLEKRLAEDERQETADFIEK 427 Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 VG +V++ L + + F F K+ + N Y+ YAY R + + RQ Sbjct: 428 VSQVVGIGAVKYADLSQNRTSNYIFSFDKML-ALQGNTAPYMLYAYVRVQGVSRQGG--- 483 Query: 473 PDLDFDLFPRN--VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 +D P + +I +E+ +EL L HL + V+ + P +L YLYDL+ Sbjct: 484 --IDLSTLPTDTPIILEEA----AELTLAKHLLQLSEVLMSVEQDLMPNRLCEYLYDLSR 537 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ + P L+ +R+++ RL L A + GL+++G+E + M Sbjct: 538 KFNQFYEAC---PILK--AEGDRRIS--RLILADTTARTLKLGLSLLGIEVLDRM 585 >gi|227892884|ref|ZP_04010689.1| arginine--tRNA ligase [Lactobacillus ultunensis DSM 16047] gi|227865290|gb|EEJ72711.1| arginine--tRNA ligase [Lactobacillus ultunensis DSM 16047] Length = 561 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 142/599 (23%), Positives = 255/599 (42%), Gaps = 108/599 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IERP++ G + A IL++ + +P IA+ I A + D D S+ G ++N Sbjct: 25 LIERPKNAKMGDYAF-PAFILAKTMHKNPAMIAQDIAANLSSD-DFASIKAVGP-YVNFA 81 Query: 93 LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 ++ L L +++ YG +GKG V I+ S N PM +GH R V+G+++A Sbjct: 82 INHEKLVSSTLKTVLTEKEHYGDQKLGKGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 M GY + Y+ D G Q L + Y+ + N+ D+ + ++ +V Sbjct: 141 KTMEKVGYTPIKINYLGDYGTQFGKLIAA----YKH--WGNEEDVKKDPIMNLFHYYV-- 192 Query: 212 ELADKYSSELLNFPE-----EKWLPIVKDYSVQAM----------MKIIRDDLKALNIQH 256 ++ E PE +W ++D +A+ +K + K L + Sbjct: 193 ----RFHKEAEKNPELDDEGREWFKKLEDGDPEAVKLWKWFREVSLKDFKRIYKELGVTF 248 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D + E F+ ++ +ID L +G ++E S+ Q DM Sbjct: 249 DSYNGEAFFN----DKMQPVIDELKDKGLLHE-------SQGAQVVDMGP---------- 287 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV----- 370 D+ ++KSDG+ Y DLA + + E F M+YV+G++ + + L+ V Sbjct: 288 -DENPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQAQHFVELKTVLKKMG 346 Query: 371 ------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412 +S +K + V L ++++ ++ ++ D Sbjct: 347 YDWADEIHHVPFGLITQGGKKLSTRKGNV-VFLDQVLKDAVSLAKKQIQEKNPDLANQDQ 405 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAK 469 V +VG +V F L KN L +FDF V+ + P YVQY AR +S+FR+A Sbjct: 406 VAHDVGVGAVVFHDL--KNDRLDNFDFNLDEVVRFEGDTGP--YVQYTNARAQSVFRKAA 461 Query: 470 DIFPDLDFDLFPRNVIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 + P E + D + LA++PR+I + EP +A + Sbjct: 462 AM-----------GEKPSEKDLVLDDDWAFAVAKDLADFPRIIARSADKFEPSVIAKFAL 510 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 DLA F+ ++++ ++ + +++ RL LV A + ++ L ++GV +P EM Sbjct: 511 DLAKKFNKYYAN------VKILTKDDK--IGARLALVEATSIVLTESLRLLGVNAPKEM 561 >gi|193069866|ref|ZP_03050815.1| arginyl-tRNA synthetase [Escherichia coli E110019] gi|192956766|gb|EDV87220.1| arginyl-tRNA synthetase [Escherichia coli E110019] Length = 577 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 145/587 (24%), Positives = 247/587 (42%), Gaps = 90/587 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLADHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + S R + K I ++ + N MHVGH R ++GD + F G++ Sbjct: 97 QQALAS----DRLDVATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHK 152 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADK 216 V R ++ D G Q L + W +Q N +DL EG+Y A K Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKK 198 Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIR 274 + E F E +VK +Q+ + R+ + L DI ++++ + R + + R Sbjct: 199 HYDEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTR 252 Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSY 331 D + + + GI+ K+K + + ++F G+ + + K DG Y Sbjct: 253 DDVMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGY 311 Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCE 387 Y D+A K +YE D ++Y + S ++ + A+ A V E + + Sbjct: 312 LYTTTDIACAKYRYESLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGM 371 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420 + L +DG P K RAG + L ++DE VG Sbjct: 372 M--LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIG 427 Query: 421 SVRFMMLWRKNSE--LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 +V++ L + + + D+D E N Y+QYAY R S+FR+A +I + Sbjct: 428 AVKYADLSKNRTTDYIFDWDNMLALEG---NTAPYMQYAYTRVLSVFRKA-EINEE---Q 480 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 481 LAAAPVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH 536 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 ------CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|74207302|dbj|BAE30837.1| unnamed protein product [Mus musculus] Length = 608 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 140/584 (23%), Positives = 258/584 (44%), Gaps = 75/584 (12%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S+ L + P IAE I + + +D V IAG GFIN++L + Sbjct: 59 GDYQCNSAMGISQMLKAKEQKVSPREIAENITKHLPNNKYIDKVEIAGPGFINVHLRKDF 118 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + L+S++V+G++ ++G KV ++F S N MHVGH R ++G++++ L F+ Sbjct: 119 VSEQLTSLLVNGVQLP--VLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFA 176 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215 GY+V R ++ D G Q L + ++ L + DL + +Y + E Sbjct: 177 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDADEEFK 235 Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SP 272 K + + + + K I+K +++ + + R++ K + DI + E RG+ Sbjct: 236 KRAYQCVVLLQSKNPDIMKAWNL--ICDVSREEFKKIYDALDITLIE----RGESFYQDR 289 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 ++DI+ +G+V + D D ++++F + G V ++KSDG YT Sbjct: 290 MKDIVKEFEDKGFV--------------QVD-DGRKIVF---VPGCSVPLTIVKSDGGYT 331 Query: 333 YFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVS---------------- 375 Y +DLA K + +E + +IYV+ + + + + + A A + Sbjct: 332 YDTSDLAAIKQRLFEEKANKIIYVVDNGQAIHFQTIFAAAQMIGWYDPKVTLVTHVGFGV 391 Query: 376 ---EKKAQINVLLCELVRLY---RDGMPIKMSK---RAGDFI----TLRHVVDEVGSDSV 422 E K + E VRL +G+ M K + D + L+ V + Sbjct: 392 VLGEDKKKFKTRSGETVRLMDLLEEGLKRSMDKLKEKERDKVLTEEELKAAQTSVAYGCI 451 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 ++ L F F K+ + + N Y+ YA+ R RSI R A ++D + R Sbjct: 452 KYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEAMLQR 505 Query: 483 NVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + D E +L + +P +++ + L Y+Y+LA+ F + Sbjct: 506 AARETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYC 565 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R K+ M R+ L AVA+++ G +I+G++ M Sbjct: 566 VEKDR-QTGKVLKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 608 >gi|167552453|ref|ZP_02346206.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168259814|ref|ZP_02681787.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|198246204|ref|YP_002215175.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|238690367|sp|B5FSM1|SYR_SALDC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|197940720|gb|ACH78053.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205322924|gb|EDZ10763.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205351086|gb|EDZ37717.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|326622923|gb|EGE29268.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 577 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 142/586 (24%), Positives = 241/586 (41%), Gaps = 88/586 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + + V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + S R + + T+ I ++ + N MHVGH R ++GD + F G+ Sbjct: 97 QQALAS----ERLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 V R ++ D G Q L + W +Q N D+ G Y A K+ E Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 202 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278 F E +VK +Q+ R+ + L DI ++++ + R + + RD + Sbjct: 203 DEAFAERARNYVVK---LQSGDTYFREMWRKLV---DITMTQNQITYDRLNVTLTRDDVM 256 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335 + + GI+ K+K + + ++F GD + + K DG Y Y Sbjct: 257 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 315 Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387 D+A K +YE D ++Y + S + V++ V +V + ++L Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 374 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420 +DG P K RAG + L ++DE VG Sbjct: 375 -----KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMSADELEKLANAVGIG 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479 +V++ L + + FD+ + + N Y+QYAY R S+FR+A D+D L Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQAL 481 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 VI E E QL L ++ + P+ + YLYD+A +F G + H Sbjct: 482 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 536 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N + RL+L A + GL+ +G+E+ M Sbjct: 537 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|168238541|ref|ZP_02663599.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194737429|ref|YP_002114945.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|238689771|sp|B4TYT3|SYR_SALSV RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|194712931|gb|ACF92152.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288679|gb|EDY28054.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 577 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 142/586 (24%), Positives = 241/586 (41%), Gaps = 88/586 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + + V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + S R + + T+ I ++ + N MHVGH R ++GD + F G+ Sbjct: 97 QQALAS----ERLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 V R ++ D G Q L + W +Q N D+ G Y A K+ E Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 202 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278 F E +VK +Q+ R+ + L DI ++++ + R + + RD + Sbjct: 203 DEAFAERARNYVVK---LQSGDTYFREMWRKLV---DITMTQNQITYDRLNVTLTRDDVM 256 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335 + + GI+ K+K + + ++F GD + + K DG Y Y Sbjct: 257 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 315 Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387 D+A K +YE D ++Y + S + V++ V +V + ++L Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 374 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420 +DG P K RAG + L ++DE VG Sbjct: 375 -----KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIG 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479 +V++ L + + FD+ + + N Y+QYAY R S+FR+A D+D L Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQAL 481 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 VI E E QL L ++ + P+ + YLYD+A +F G + H Sbjct: 482 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 536 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N + RL+L A + GL+ +G+E+ M Sbjct: 537 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|66043664|ref|YP_233505.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a] gi|75503765|sp|Q4ZZF5|SYR_PSEU2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|63254371|gb|AAY35467.1| Arginyl-tRNA synthetase, class Ic [Pseudomonas syringae pv. syringae B728a] Length = 579 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 140/602 (23%), Positives = 251/602 (41%), Gaps = 100/602 (16%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE ++A + D + V IAG GF+N Sbjct: 30 IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADQQISKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + + L L + + + G +V ++ + N MHVGH R ++GD +A Sbjct: 90 FQNTAALAARLDAALADPEKLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 149 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ F G V R+ ++ D G Q L + + + A + SDL E +Y Sbjct: 150 NVLEFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 196 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263 A + E F E +VK + A + K +++ H ++ ++ Sbjct: 197 RAAKQRFDESEEFAERARGLVVKLQAGDAECLALWTRFKDISLSHCQETYERLNVKLTPA 256 Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 D G+ + + +++++L G + E S Q ++ FR+ DD Sbjct: 257 DVM-GESAYNDDLANVVNDLKATGLLVE-------SNGAQCVFLEE----FRTA---DDT 301 Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374 P++ K+ G Y Y DLA ++ K + D ++Y + + + +++ VA A Sbjct: 302 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKA-DRVLYFVDQRQALHFQQVFEVARRAGF 360 Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFI----------TL 410 Q+ + + RDG +K+ +RA + L Sbjct: 361 VHDGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVREKNPEVAEAEL 420 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 421 RSIAKAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKLGS 479 Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 FD ++ PQE E L LA++ + N P+ L YLYD Sbjct: 480 A-----FDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYD 527 Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 LA +F + + G ENP + RL+L + GL+++G+E+ Sbjct: 528 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 577 Query: 584 EM 585 M Sbjct: 578 RM 579 >gi|330957049|gb|EGH57309.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 578 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 142/600 (23%), Positives = 251/600 (41%), Gaps = 97/600 (16%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE ++A + D V V IAG GF+N Sbjct: 30 IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADDQVSKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + + L L + +V + G +V ++ + N MHVGH R ++GD +A Sbjct: 90 FQNTAALAARLDAALVD-TQLSVRKAGPAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ F G V R+ ++ D G Q L + + + A + SDL + Y Sbjct: 149 NVLEFLGDAVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDLEDFY----------- 195 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 A + E F E +VK + A + K +++ H I E R P+ Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLTLWKRFKDISLSHCQEIYERLNVRLTPA 255 Query: 272 PI----------RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 + +++++L G + E S Q ++ FR+ DD Sbjct: 256 DVMGESAYNEDLANVVNDLKATGLLVE-------SNGAQCVFLEE----FRTA---DDTP 301 Query: 322 RPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVA--AAVSE 376 P++ K+ G Y Y DLA + + + D ++Y + + + +++ VA A Sbjct: 302 LPVIVQKAGGGYLYATTDLAAIRYRSKVLEADRVLYFVDQRQALHFQQVFEVARRAGFVH 361 Query: 377 KKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------LRH 412 + Q+ + + RDG +K+ +RA + LR Sbjct: 362 QGMQLEHMGFGTMNGADGRPFKTRDGGTVKLVDLLDEAEERAYTLVKEKNPEVAEAELRS 421 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 422 IARAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKL---- 476 Query: 473 PDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 FD +++ PQE E L LA++ + N P+ L YLYDLA Sbjct: 477 -GTPFDADKGHIVLEAPQEQE-------LAARLAQFAETLNNVAEKGTPHVLCAYLYDLA 528 Query: 530 SVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +F + + G E+P + +K RL+L + GL+++G+E+ M Sbjct: 529 GLFSSFYENCPILGAESP-------DQQK---SRLRLAALTGRTLKQGLDLLGLETLERM 578 >gi|224825070|ref|ZP_03698176.1| arginyl-tRNA synthetase [Lutiella nitroferrum 2002] gi|224602741|gb|EEG08918.1| arginyl-tRNA synthetase [Lutiella nitroferrum 2002] Length = 572 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 139/603 (23%), Positives = 256/603 (42%), Gaps = 126/603 (20%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKI 101 G N M ++ L +P +A+ ++A + ++ + IAG GFIN++L+P++L R+ Sbjct: 36 GDYQANGVMAAAKQLKTNPRELAQKVLAVLDLEGIASKLEIAGPGFINIHLNPAFLARRA 95 Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161 +++ + + KV +E+ S N MH+GH R ++GD L + +F G+ V Sbjct: 96 ETALADEALGITKV---DAKKVMVEYSSVNLAKEMHIGHLRGGIIGDALVRVNSFIGHNV 152 Query: 162 TREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPG 203 R+ ++ D G Q L L F+++ + ++ D+ + Sbjct: 153 VRQNHVGDWGTQFGMLVAYMVEISKSGQADLELKDLDTFYKHSKKRFDEDTAFADTARDY 212 Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 V G +E+L W Q +K+ A+ + + +++D Sbjct: 213 VVKLQSG-------DAEVLKL----W---------QQFVKLSLTHCNAIYQKLGLQLNDD 252 Query: 264 DFHRG-----DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 D RG D P+ +++ L ++G + E + Q +D F++ G+ Sbjct: 253 DV-RGESFYNDDLPV--LVEELRQKGLLVE-------DQGAQVVFLDE----FKNKE-GE 297 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVS 375 + K G Y Y DL + + + G D +YV+ S S + ++L + A A Sbjct: 298 PAAFIVQKQGGGYLYATTDLGAIRFRVNKLGLDRCLYVVDSRQSLHFQQLFSTARKAGWL 357 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL- 434 ++A + + + DG P+K R+G+ + L ++DE + F ++ KN EL Sbjct: 358 PEEADFQHIGHGTI-MGPDGKPLKT--RSGENVKLVELLDEAVERA--FQLVTSKNPELP 412 Query: 435 ----------LDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRSIFRQ 467 + K + SK N Y+QYAY R +S+FR+ Sbjct: 413 EAERRQIAAVVGIGALKYADLSKSRNTDYIFDWDAMLSFEGNTAPYLQYAYTRVQSVFRK 472 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 A+ DFD + +I + +E QL V LA++ V+ + +P+ L YLY+ Sbjct: 473 AE------DFDPAAKVLITE-----VAEKQLAVVLAQFEDVVFAVADSSQPHHLCGYLYN 521 Query: 528 LASVFHGHWSHGRENPRLRFVQA-----NNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 +A++F RF +A + ++ RLQL A + SGL ++G+E Sbjct: 522 VATLFS------------RFYEACPILKSEGQVRASRLQLAALTAKTLQSGLGLLGIEVL 569 Query: 583 NEM 585 + M Sbjct: 570 DAM 572 >gi|204930959|ref|ZP_03221785.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204320003|gb|EDZ05208.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 577 Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 141/586 (24%), Positives = 239/586 (40%), Gaps = 88/586 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + + V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGVMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQV 96 Query: 103 SSIVVSGIEYGRNLIGKGT--KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + S R + + T + +++ + N MHVGH R ++GD + F G+ Sbjct: 97 QQALAS----DRLGVSQPTLQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 V R ++ D G Q L + W +Q N D+ G Y A K+ E Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 202 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278 F E +VK S A + + L DI ++++ + R + + RD + Sbjct: 203 DEAFAERARNYVVKLQSGDAYFREMWRKLV------DITMTQNQITYDRLNVTLTRDDVM 256 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335 + + GI+ K+K + + ++F GD + + K DG Y Y Sbjct: 257 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 315 Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387 D+A K +YE D ++Y + S + V++ V +V + ++L Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 374 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420 +DG P K RAG + L ++DE VG Sbjct: 375 -----KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPNMPADELEKLANAVGIG 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479 +V++ L + + FD+ + + N Y+QYAY R S+FR+A D+D L Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQAL 481 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 VI E E QL L ++ + P+ + YLYD+A +F G + H Sbjct: 482 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 536 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N + RL+L A + GL+ +G+E+ M Sbjct: 537 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|330971745|gb|EGH71811.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 579 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 139/601 (23%), Positives = 250/601 (41%), Gaps = 98/601 (16%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE ++A + D + V IAG GF+N Sbjct: 30 IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQISKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + + L L + + + G +V ++ + N MHVGH R ++GD +A Sbjct: 90 FQNTAALAARLDAALADPEKLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 149 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ F G V R+ ++ D G Q L + + + A + SDL E +Y Sbjct: 150 NVLEFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 196 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263 A + E F E +VK + A + K +++ H ++ ++ Sbjct: 197 RAAKQRFDESEEFAERARGLVVKLQAGDAECLALWTRFKDISLSHCQETYERLNVKLTPA 256 Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 D G+ + + +++++L G + E S Q ++ FR+ DD Sbjct: 257 DVM-GESAYNDDLANVVNDLKATGLLVE-------SNGAQCVFLEE----FRTA---DDT 301 Query: 321 DRPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVA--AAVS 375 P++ K+ G Y Y DLA + + + D ++Y + + + +++ VA A Sbjct: 302 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKADRVLYFVDQRQALHFQQVFEVARRAGFV 361 Query: 376 EKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------LR 411 Q+ + + RDG +K+ +RA + LR Sbjct: 362 HDGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEAELR 421 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 422 SIAKAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKLGSA 480 Query: 472 FPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 FD ++ PQE E L LA++ + N P+ L YLYDL Sbjct: 481 -----FDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYDL 528 Query: 529 ASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 A +F + + G ENP + RL+L + GL+++G+E+ Sbjct: 529 AGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLER 578 Query: 585 M 585 M Sbjct: 579 M 579 >gi|158631214|ref|NP_001099247.2| arginyl-tRNA synthetase, cytoplasmic [Rattus norvegicus] gi|300669674|sp|P40329|SYRC_RAT RecName: Full=Arginyl-tRNA synthetase, cytoplasmic; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|171846737|gb|AAI61929.1| Arginyl-tRNA synthetase [Rattus norvegicus] Length = 660 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 147/623 (23%), Positives = 271/623 (43%), Gaps = 80/623 (12%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDR--IVIERPRDCAHGHLSTNAAMILSRPLG----- 58 + +SRL+ C IK L+ +V+ + G N+AM +S+ L Sbjct: 75 NINSRLQELF---GCAIKAAYPDLENPPLVVTPSQQPKFGDYQCNSAMGISQMLKAKEQK 131 Query: 59 LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 + P IAE I + + +D V IAG GFIN++L ++ + L++++V+G++ ++G Sbjct: 132 VSPREIAENITKHLPNNEYIDRVEIAGPGFINVHLRKDFVSEQLTNLLVNGVQLP--VLG 189 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 + KV ++F S N MHVGH R ++G++++ L F+GY V R ++ D G Q L Sbjct: 190 ENEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYNVLRLNHVGDWGTQFGMLI 249 Query: 179 LSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236 + ++ L + DL + +Y + +E K + E + + K I+K + Sbjct: 250 AHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFKKRAYECVVLLQSKNPDIMKAW 308 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPP 293 ++ + + R++ + DI + E RG+ ++DI+ +G+V Sbjct: 309 NL--ICDVSREEFNKIYDALDITLIE----RGESFYQDRMKDIVKEFEDKGFV------- 355 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNM 352 + D D ++++F + G V ++KSDG YTY +DLA K + +E + + Sbjct: 356 -------QVD-DGRKIVF---VPGCSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKI 404 Query: 353 IYVMGSDHSGYVKRLEAVAAAVS-------------------EKKAQINVLLCELVRLY- 392 IYV+ + + + + + A A + E K + E VRL Sbjct: 405 IYVVDNGQATHFQTVFAAAQMIGWYDPKVTRVAHVGFGVVLGEDKKKFKTRSGETVRLMD 464 Query: 393 ------RDGMPIKMSKRAGDFIT---LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443 R M K +T L+ V +++ L F F K+ Sbjct: 465 LLEEGLRRSMDKLKEKERDKVLTEEELKAAQTSVAYGCIKYADLSHNRLNDYVFSFDKML 524 Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHL 502 + + N Y+ YA+ R RSI R A ++D ++ R + D E +L + Sbjct: 525 D-DRGNTAAYLLYAFTRIRSIARLA-----NIDEEMLQRAARETKIILDHEKEWKLGRCI 578 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 +P +++ + L Y+Y+LA+ F + + R K+ M R+ L Sbjct: 579 LRFPEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQT-GKVLKVNMWRMLL 637 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 AVA+++ G +I+G++ M Sbjct: 638 CEAVAAVMAKGFDILGIKPVQRM 660 >gi|74141610|dbj|BAE38569.1| unnamed protein product [Mus musculus] Length = 660 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 140/584 (23%), Positives = 258/584 (44%), Gaps = 75/584 (12%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S+ L + P IAE I + + +D V IAG GFIN++L + Sbjct: 111 GDYQCNSAMGISQMLKAKEQKVSPREIAENITKHLPNNKYIDKVEIAGPGFINVHLRKDF 170 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + L+S++V+G++ ++G KV ++F S N MHVGH R ++G++++ L F+ Sbjct: 171 VSEQLTSLLVNGVQLP--VLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFA 228 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215 GY+V R ++ D G Q L + ++ L + DL + +Y + E Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHMQDKFPDYLTVSPPIGDL-QAFYKESKKRFDADEEFK 287 Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SP 272 K + + + + K I+K +++ + + R++ K + DI + E RG+ Sbjct: 288 KRAYQCVVLLQSKNPDIMKAWNL--ICDVSREEFKKIYDALDITLIE----RGESFYQDR 341 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 ++DI+ +G+V + D D ++++F + G V ++KSDG YT Sbjct: 342 MKDIVKEFEDKGFV--------------QVD-DGRKIVF---VPGCSVPLTIVKSDGGYT 383 Query: 333 YFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVS---------------- 375 Y +DLA K + +E + +IYV+ + + + + + A A + Sbjct: 384 YDTSDLAAIKQRLFEEKANKIIYVVDNGQAIHFQTIFAAAQMIGWYDPKVTLVTHVGFGV 443 Query: 376 ---EKKAQINVLLCELVRLY---RDGMPIKMSK---RAGDFI----TLRHVVDEVGSDSV 422 E K + E VRL +G+ M K + D + L+ V + Sbjct: 444 VLGEDKKKFKTRSGETVRLMDLLEEGLKRSMDKLKEKERDKVLTEEELKAAQTSVAYGCI 503 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 ++ L F F K+ + + N Y+ YA+ R RSI R A ++D + R Sbjct: 504 KYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEAMLQR 557 Query: 483 NVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + D E +L + +P +++ + L Y+Y+LA+ F + Sbjct: 558 AARETKIILDHEKEWKLGRCILRFPEILQKILDNLFLHTLCDYIYELATTFTEFYDSCYC 617 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R K+ M R+ L AVA+++ G +I+G++ M Sbjct: 618 VEKDRQT-GKVLKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660 >gi|310767881|gb|ADP12831.1| arginyl-tRNA synthetase [Erwinia sp. Ejp617] Length = 576 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 144/616 (23%), Positives = 240/616 (38%), Gaps = 117/616 (18%) Query: 32 IVIERPRDC----------AHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSV 81 I + P DC G N M +++ LG+ P +AE ++ ++ + V Sbjct: 16 IAVGAPADCEPQVRQSAKAQFGDYQANGIMAVAKNLGMPPRQLAEKVLEQLDLSGIAHKV 75 Query: 82 FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 IAG GFIN++L+P +L + S V+ + G + + T V I++ + N MHVGH Sbjct: 76 EIAGPGFINIFLAPQWLSAQIDS-VLRAPKLGISPVEPKTVV-IDYSAPNVAKEMHVGHV 133 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN---------------TLALS---VFW 183 R ++GD A +AF G++V R ++ D G Q TLAL+ F+ Sbjct: 134 RSTIIGDAAARTLAFLGHKVIRANHVGDWGTQFGMLIAFLEKQQNEHQETLALADLEAFY 193 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 R + Y+ D E V G E K +L++ + I +V Sbjct: 194 REAKRTYDEDPAFAERARGYVVKLQGGDEYCRKMWKQLVDITMTQNQLIYDRMNV----T 249 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 + RDD+ ++ +D+ + I+ +L +G E Sbjct: 250 LARDDVMGESLYNDM--------------LPGIVADLKAKGLAVES-------------- 281 Query: 304 MDRKQLLFR---STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359 D ++F G+ + + K DG Y Y D+A K +YE D ++Y + S Sbjct: 282 -DGATVVFLDEYKNKDGEPMGVIVQKKDGGYLYTTTDIACAKYRYETLKADRVLYYIDSR 340 Query: 360 HSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 ++ + + A V E + + + L +DG P K RAG I L ++DE Sbjct: 341 QHQHLMQAWTIVRKAGYVPENIPLEHHMFGMM--LGKDGKPFK--TRAGGTIKLSDLLDE 396 Query: 417 ---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 VG +V++ L + + FD+ + + N Sbjct: 397 AIDRATRLVAEKNPDMPAGELKALANIVGIGAVKYADLSKSRTTDYIFDWDNMLA-FEGN 455 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 Y+QYAY R S+FR+A + V + E L V L ++ I Sbjct: 456 TAPYMQYAYTRVLSVFRKA---------GIDAEAVSGTTRIIEDREAALAVRLLQFDETI 506 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 P+ + YLYDLA +F G + H + A + RL+L A Sbjct: 507 TQVARDGMPHVMCAYLYDLAGLFSGFYEH------CPILNAEDEATKQSRLRLALLTAKT 560 Query: 570 INSGLNIIGVESPNEM 585 + GL+ +G+ + M Sbjct: 561 LKQGLDTLGIATVERM 576 >gi|149911776|ref|ZP_01900381.1| arginyl-tRNA synthetase [Moritella sp. PE36] gi|149805164|gb|EDM65185.1| arginyl-tRNA synthetase [Moritella sp. PE36] Length = 584 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 135/607 (22%), Positives = 240/607 (39%), Gaps = 103/607 (16%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 RI ++R RD AHG L+TN AM++++P +P +A+LI+ + VD IAG GFIN Sbjct: 29 RIAVDRTRDKAHGDLATNLAMMMAKPAKKNPRELAQLIIDNLPESDLVDRTEIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 ++L+ ++L + + I + V ++ S N MHVGH R +++GD++ Sbjct: 89 IFLNQNWLAQQI-DIALEDDNLAVQKTTAPDTVVVDLSSPNLAKEMHVGHLRSSIIGDSV 147 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYN 191 A + G+ V R+ ++ D G Q L L VF+R + ++ Sbjct: 148 ARTLELLGHNVIRQNHVGDWGTQFGMLLAYMEEKRAENAEISMQLSDLEVFYRAAKGRFD 207 Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251 D V + G E +K E + I K +V K+ RDD++ Sbjct: 208 ESEDFAIRAREMVVMLQSGDEECNKLWKEFNDVSLAHCHDIYKRLNV----KLTRDDVRG 263 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 + F+ D + +++ L QG + E KC +F Sbjct: 264 -----------ESFYNSD---LHNVVSELEAQGLLTES--------NGAKC-------VF 294 Query: 312 RSTMVGDDVDRPL----LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKR 366 D D PL K+ G + Y DLA + + + + ++Y + + + ++ Sbjct: 295 LDEFKNKDGD-PLPVIIQKNGGGFLYATTDLAAMRYRQQTLNANRIMYFVDQRQALHFQQ 353 Query: 367 LEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAG------DFIT---------- 409 + +V K + ++ + DG P K R+G D +T Sbjct: 354 VFSVVQKAGFVKPETSLEHLGFGTMNGADGRPFKT--RSGGTVKLVDLLTEAEERAYALV 411 Query: 410 -----------LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 L+H+ VG SV++ L + S F+F + + N Y+ YA Sbjct: 412 KSKNPNLAEDELKHIARVVGISSVKYADLSKNRSSDYIFNFDSML-SFEGNTAPYLLYAC 470 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 R SIF + +D + + + E +L L ++ ++ P Sbjct: 471 TRVGSIFNK-------VDAATEAKLATAKVQLNEDKEQELAGKLIQFNEIVHLVAKRATP 523 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 L YL++LA VF + + + + + RL+L A + GL+++G Sbjct: 524 NTLCTYLFELAGVFSSFYE------ACPILSTEDEAIKLSRLKLAQLTAKTLKQGLDLLG 577 Query: 579 VESPNEM 585 +E+ M Sbjct: 578 IETLERM 584 >gi|157158431|ref|YP_001463181.1| arginyl-tRNA synthetase [Escherichia coli E24377A] gi|166980181|sp|A7ZN02|SYR_ECO24 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|157080461|gb|ABV20169.1| arginyl-tRNA synthetase [Escherichia coli E24377A] Length = 577 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 144/585 (24%), Positives = 247/585 (42%), Gaps = 86/585 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLADHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + S R + K I ++ + N MHVGH R ++GD + F G++ Sbjct: 97 QQALAS----DRLDVATPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHK 152 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADK 216 V R ++ D G Q L + W +Q N +DL EG+Y A K Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKK 198 Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIR 274 + E F E +VK +Q+ + R+ + L DI ++++ + R + + R Sbjct: 199 HYDEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTR 252 Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSY 331 D + + + GI+ K+K + + ++F G+ + + K DG Y Sbjct: 253 DDVMGESLYNPMLLGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGY 311 Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCE 387 Y D+A K +YE D ++Y + S ++ + A+ A V E + + Sbjct: 312 LYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGM 371 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420 + L +DG P K RAG + L ++DE VG Sbjct: 372 M--LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIG 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +V++ L + + FD+ + + N Y+QYAY R S+FR+A +I + L Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLA 482 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 483 AAPVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH-- 536 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 ----CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|74212414|dbj|BAE30955.1| unnamed protein product [Mus musculus] Length = 660 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 140/584 (23%), Positives = 258/584 (44%), Gaps = 75/584 (12%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S+ L + P IAE I + + +D V IAG GFIN++L + Sbjct: 111 GDYQCNSAMGISQMLKAKEQKVSPREIAENITKHLPNNKYIDKVEIAGPGFINVHLRKDF 170 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + L+S++V+G++ ++G KV ++F S N MHVGH R ++G++++ L F+ Sbjct: 171 VSEQLTSLLVNGVQLP--VLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFA 228 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215 GY+V R ++ D G Q L + ++ L + DL + +Y + E Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDADEEFK 287 Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SP 272 K + + + + K I+K +++ + + R++ K + DI + E RG+ Sbjct: 288 KRAYQCVVLLQSKNPDIMKAWNL--ICDVSREEFKKIYDALDITLIE----RGESFYQDR 341 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 ++DI+ +G+V + D D ++++F + G V ++KSDG YT Sbjct: 342 MKDIVKEFEDKGFV--------------QVD-DGRKIVF---VPGCSVPLTIVKSDGGYT 383 Query: 333 YFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVS---------------- 375 Y +DLA K + +E + +IYV+ + + + + + A A + Sbjct: 384 YDTSDLAAIKQRLFEEKANKIIYVVDNGQAIHFQTIFAAAQMIGWYDPKVTLVTHVGFGV 443 Query: 376 ---EKKAQINVLLCELVRLY---RDGMPIKMSK---RAGDFI----TLRHVVDEVGSDSV 422 E K + E VRL +G+ M K + D + L+ V + Sbjct: 444 VLGEDKKKFKTRSGETVRLMDLLEEGLKRSMDKLKEKERDKVLTEEELKAAQTSVAYGCI 503 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 ++ L F F K+ + + N Y+ YA+ R RSI R A ++D + R Sbjct: 504 KYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEAMLQR 557 Query: 483 NVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + D E +L + +P +++ + L Y+Y+LA+ F + Sbjct: 558 AARETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYC 617 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R K+ M R+ L AVA+++ G +I+G++ M Sbjct: 618 VEKDRQT-GKVLKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660 >gi|309799197|ref|ZP_07693447.1| arginyl-tRNA synthetase [Streptococcus infantis SK1302] gi|308117214|gb|EFO54640.1| arginyl-tRNA synthetase [Streptococcus infantis SK1302] Length = 563 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 143/595 (24%), Positives = 253/595 (42%), Gaps = 99/595 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E+P++ G ++ A L++ P IA I KI+ +A ++N + Sbjct: 26 LLEQPKNSDMGDIAF-PAFTLAKVERKAPQMIAADIAE--KINSQAFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + + ++L +++ Y IGK V I+ S N P +GH R V+GD+L+ Sbjct: 83 LDKNAISAQVLQAVITEKEHYADQNIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + GY+ + ++ D G Q L ++ W ++A+ + D LK Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194 Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267 + A+ + L+ +W ++ D A+ + RD+ L N ++ E D + Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELKVEFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + ++D L+ +G + E S+ Q ++++ ++ P Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLVE-------SEGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L KSDG+ Y DLA Y K +Y+ F IYV+G + S + K+L+AV + + Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 Q +++ + ++G K+S R G+ I L V E Sbjct: 355 Q-DIVHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAISRAKAQIEAKNSELENKDQVA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +++F L + DFD V + + P YVQYAYAR +SI R+A Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD---- 465 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 F S D ++I + ++PR+I A EP +A + LA F+ Sbjct: 466 ------FKPETAANYSLNDPESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQAFN 519 Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R E+P RL L +A A ++ L ++GVE+P +M Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563 >gi|262118273|ref|NP_080212.2| arginyl-tRNA synthetase, cytoplasmic [Mus musculus] gi|20178137|sp|Q9D0I9|SYRC_MOUSE RecName: Full=Arginyl-tRNA synthetase, cytoplasmic; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|18043638|gb|AAH20132.1| Arginyl-tRNA synthetase [Mus musculus] gi|26345154|dbj|BAC36226.1| unnamed protein product [Mus musculus] gi|56205734|emb|CAI24388.1| arginyl-tRNA synthetase [Mus musculus] gi|74208028|dbj|BAE29127.1| unnamed protein product [Mus musculus] gi|148684328|gb|EDL16275.1| arginyl-tRNA synthetase [Mus musculus] Length = 660 Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 140/584 (23%), Positives = 258/584 (44%), Gaps = 75/584 (12%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S+ L + P IAE I + + +D V IAG GFIN++L + Sbjct: 111 GDYQCNSAMGISQMLKAKEQKVSPREIAENITKHLPNNKYIDKVEIAGPGFINVHLRKDF 170 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + L+S++V+G++ ++G KV ++F S N MHVGH R ++G++++ L F+ Sbjct: 171 VSEQLTSLLVNGVQLP--VLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFA 228 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215 GY+V R ++ D G Q L + ++ L + DL + +Y + E Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDADEEFK 287 Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SP 272 K + + + + K I+K +++ + + R++ K + DI + E RG+ Sbjct: 288 KRAYQCVVLLQSKNPDIMKAWNL--ICDVSREEFKKIYDALDITLIE----RGESFYQDR 341 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 ++DI+ +G+V + D D ++++F + G V ++KSDG YT Sbjct: 342 MKDIVKEFEDKGFV--------------QVD-DGRKIVF---VPGCSVPLTIVKSDGGYT 383 Query: 333 YFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVS---------------- 375 Y +DLA K + +E + +IYV+ + + + + + A A + Sbjct: 384 YDTSDLAAIKQRLFEEKANKIIYVVDNGQAIHFQTIFAAAQMIGWYDPKVTLVTHVGFGV 443 Query: 376 ---EKKAQINVLLCELVRLY---RDGMPIKMSK---RAGDFI----TLRHVVDEVGSDSV 422 E K + E VRL +G+ M K + D + L+ V + Sbjct: 444 VLGEDKKKFKTRSGETVRLMDLLEEGLKRSMDKLKEKERDKVLTEEELKAAQTSVAYGCI 503 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 ++ L F F K+ + + N Y+ YA+ R RSI R A ++D + R Sbjct: 504 KYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEAMLQR 557 Query: 483 NVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + D E +L + +P +++ + L Y+Y+LA+ F + Sbjct: 558 AARETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYC 617 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R K+ M R+ L AVA+++ G +I+G++ M Sbjct: 618 VEKDRQT-GKVLKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660 >gi|113477422|ref|YP_723483.1| arginyl-tRNA synthetase [Trichodesmium erythraeum IMS101] gi|122964531|sp|Q10XL4|SYR_TRIEI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|110168470|gb|ABG53010.1| arginyl-tRNA synthetase [Trichodesmium erythraeum IMS101] Length = 585 Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 152/585 (25%), Positives = 236/585 (40%), Gaps = 93/585 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AM L++ L P IA I+ + I+ IAG GFINL L P Y+ L Sbjct: 40 GDYQCNVAMSLAKKLKDKPKAIATQIINNLNINDYFYPPEIAGPGFINLSLKPEYIENCL 99 Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 +I+ I +N +V I+F S N MHVGH R ++GD+LA ++ F G+ Sbjct: 100 ETIIKDEKLNISPTKN----PQRVVIDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFQGH 155 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELAD 215 V R ++ D G Q L + + +AL D DL Y ++ + Sbjct: 156 NVLRLNHVGDWGTQFGMLISYLREAFPEALKTADILDIGDLVAFYKQSKKRFDEDQDFQE 215 Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SP 272 K E++N L + S A + + + +D+ + + RG+ S Sbjct: 216 KSRQEVVN------LQTGAEDSRHAWELLCNQSRREFQVIYDLLDIKLN-ERGESFYNSM 268 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDG 329 + I++ L R G + E D Q +F S G+DV + KSDG Sbjct: 269 LPGIVEELNRLGLLEES---------------DGAQCVFLSGFTNKEGEDVPLIVKKSDG 313 Query: 330 SYTYFAADLAYFKCKYER-GFDNMIYVMG---SDHSGYVKRLEAVAAAVSEKKAQINVLL 385 Y Y DLA + E+ G +IYV ++H V ++ A + E +NV Sbjct: 314 GYNYATTDLAALVHRIEKEGATRLIYVTDAGQANHFSQVWQVAKKAGWIPENVEIVNVFF 373 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------------- 416 + L DG K+ R+G+ + L ++DE Sbjct: 374 G--LVLGEDGK--KLKTRSGETVRLIDLLDEAINKARNDLEKRLKDEKRLESEEFIKNVA 429 Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 VG +V++ L + F F K+ + N Y+ YAY R + I R+ + F Sbjct: 430 QVVGLSAVKYADLSQNRKSNYVFSFDKML-ALQGNTAPYLLYAYVRVQGISRKGEINFEK 488 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 L D +I Q D EL L HL + V+ TI P +L YLY+L+ F+ Sbjct: 489 LRKD---AKIILQ----DEPELVLGKHLLKLNEVLNIVTIELLPNRLCEYLYELSEKFNK 541 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 + + P L+ + L RL L A + GL ++G+ Sbjct: 542 FFENC---PVLK----SEEPLRTSRLLLCDLTARTLKLGLYLLGI 579 >gi|118586528|ref|ZP_01543971.1| arginyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163] gi|118433032|gb|EAV39755.1| arginyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163] Length = 566 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 139/602 (23%), Positives = 259/602 (43%), Gaps = 101/602 (16%) Query: 29 LDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG- 85 LD++ ++E+P+D G + L+ P IA +KI ++D A Sbjct: 21 LDKLEKLVEKPKDLNRGDYAF-PTFSLAAKFHEAPQKIA------LKIADEIDRTNFANV 73 Query: 86 ---KGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 ++N ++ + ++L I+++ ++GRN G G K+ I+ S N PM +GH Sbjct: 74 KAVGPYVNFFIQRVEFTNQLLKEILLND-DFGRNNQGAGKKIVIDMSSPNIAKPMSMGHL 132 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN-TLALSVFWRYQQALYNNDSDLPEGY 200 R V+G+ ++ + +GY+ + ++ D G Q +A W + + N P Sbjct: 133 RSTVIGEAISKIAKANGYQTIKINFLGDWGTQFGLMIAAYKLWGDDKLINKN----PVDE 188 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM----------MKIIRDDLK 250 +Y+K + DK L W ++D +A+ +K ++ Sbjct: 189 LVKLYVKINKESETDKS----LKDSGRAWFKKLEDGDPEAVKLWNWFKSVSLKEFQEVYD 244 Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310 L + D E F+ P+ + LA +G + E S+ + D+ Sbjct: 245 RLGVSFDSMNGEA-FYNDKMEPV---VKMLASKGLLTE-------SQGAEIVDLP----- 288 Query: 311 FRSTMVGDDVDRPLLK-SDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLE 368 + + D+ ++K SDG+ Y DLA +++ F +YV+G++ + +++ Sbjct: 289 --NLLPKDNYPIAMIKRSDGATQYITRDLASAIYRHDAYDFAKSLYVVGAEQKDHFDQMK 346 Query: 369 AV-----------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405 A+ +S +K I V L +++ R ++S++ Sbjct: 347 AILKLAGDDWADDIEHIGFGMITMNGKKMSTRKGNI-VPLVDVLDTARQLAAEQISEKNP 405 Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSI 464 HV +EVG+ +V F L + + +DFD K+ + + P YVQY +AR SI Sbjct: 406 GLENADHVAEEVGAGAVVFNDLQKDRNLSIDFDLEKIVQFEGDTGP--YVQYTHARAMSI 463 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 R++ + ++ E F D ++ L+ YP +I+ A +EP +A Sbjct: 464 LRKSGQ-----------QAILNTEVTFVDEEAWPIVSRLSAYPEMIKRAWQLREPSIVAK 512 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 YL LA F+ +++H + + NN K+ RL LV V ++ SGLN++GV +PN Sbjct: 513 YLLSLARDFNSYYAHTK-------ILVNNEKM-QSRLSLVQGVCFVLKSGLNLLGVSAPN 564 Query: 584 EM 585 +M Sbjct: 565 QM 566 >gi|16760859|ref|NP_456476.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141449|ref|NP_804791.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|21542251|sp|Q8Z5V7|SYR_SALTI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|25293290|pir||AI0744 arginine-tRNA ligase (EC 6.1.1.19) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503156|emb|CAD05660.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi] gi|29137076|gb|AAO68640.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 577 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 140/586 (23%), Positives = 241/586 (41%), Gaps = 88/586 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + + V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQV 96 Query: 103 SSIVVSGIEYGRNLIGKGTK--VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + S R + + T+ + +++ + N MHVGH R ++GD + F G+ Sbjct: 97 QQALTS----DRLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 V R ++ D G Q L + W +Q N D+ G Y A K+ E Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 202 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278 F E +VK +Q+ R+ + L DI ++++ + R + + RD + Sbjct: 203 DETFAERARNYVVK---LQSGDTYFREMWRKLV---DITMTQNQITYDRLNVTLTRDDVM 256 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335 + + GI+ K+K + + ++F GD + + K DG Y Y Sbjct: 257 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 315 Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387 D+A K +YE D ++Y + S + V++ V +V + ++L Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 374 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420 +DG P K R G + L ++DE VG Sbjct: 375 -----KDGKPFK--TRTGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIG 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479 +V++ L + + FD+ + + N Y+QYAY R S+FR+A D+D L Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQAL 481 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 VI E E QL L ++ + P+ + YLYD+A +F G + H Sbjct: 482 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 536 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N + RL+L A + GL+ +G+E+ M Sbjct: 537 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|198282039|ref|NP_001127107.1| arginyl-tRNA synthetase, cytoplasmic [Pongo abelii] gi|75041818|sp|Q5RA20|SYRC_PONAB RecName: Full=Arginyl-tRNA synthetase, cytoplasmic; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|55729309|emb|CAH91390.1| hypothetical protein [Pongo abelii] Length = 660 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 144/598 (24%), Positives = 255/598 (42%), Gaps = 103/598 (17%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S+ L ++P IAE I + + ++ V IAG GFIN++L + Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINIHLRKDF 170 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + L+S++V+G++ +G+ KV ++F S N MHVGH R ++G++++ L F+ Sbjct: 171 VSEQLTSLLVNGVQLPA--LGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFA 228 Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198 GY+V R +I D G Q L L VF++ + ++ + + + Sbjct: 229 GYDVLRLNHIGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKK 288 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y V L GK N K ++ D S Q + KI AL++ + Sbjct: 289 RAYQCVVLLQ-GK-----------NPDITKAWKLICDVSRQELNKI----YDALDVS--L 330 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + F++ + DI+ +G+V + D D ++++F + G Sbjct: 331 IERGESFYQ---DMMNDIVKEFEDRGFV--------------QVD-DGRKIVF---VPGC 369 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV--- 374 + +LKSDG YTY +DLA K + +E D +IYV+ + S + + + A A + Sbjct: 370 SIPLTILKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHFQTIFAAAQMIGWY 429 Query: 375 ----------------SEKKAQINVLLCELVRLYR---DGMPIKMSK---RAGDFI---- 408 E K + E VRL +G+ M K + D + Sbjct: 430 DPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSMDKLKEKERDKVLTAE 489 Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 L + V++ L F F K+ + K N Y+ YA+ R RSI R A Sbjct: 490 ELNAAQTSIAYGCVKYADLSHNRLNDYIFSFDKMLD-DKGNTAAYLLYAFTRIRSIARLA 548 Query: 469 KDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 ++D ++ + + D E +L + +P +++ + L Y+Y+ Sbjct: 549 -----NIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYE 603 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA+ F + + R K+ M R+ L AVA+++ G +I+G++ M Sbjct: 604 LATTFTEFYDSCYCVEKDRQT-GKILKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660 >gi|94995321|ref|YP_603419.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS10750] gi|123257496|sp|Q1J486|SYR_STRPF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|94548829|gb|ABF38875.1| Arginyl-tRNA synthetase [Streptococcus pyogenes MGAS10750] Length = 563 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 143/603 (23%), Positives = 255/603 (42%), Gaps = 115/603 (19%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G L+ A L++ L P IA + +I + + V G +IN + Sbjct: 26 LLETPKNSDMGDLAF-PAFSLAKVLRKAPQMIASELAEQID-ESQFEKVVAVGP-YINFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + + ++L ++ +G +Y + G+G V I+ S N P +GH R V+GD+LA Sbjct: 83 LDKAKISSQVLEQVITAGSDYAQQDEGQGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + A GY+ + ++ D G Q L ++ W + A+ + D Y + + Sbjct: 143 HIFAKMGYQPVKINHLGDWGKQFGMLIVAYKKWGDEAAVQAHPIDELLKLYVRINAEAET 202 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 D+ + E W ++D +A + + RD+ L N +D D + Sbjct: 203 DPTVDEEARE--------WFRKLEDGDKEATELWQWFRDESLLEFNRLYDQLHVTFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + ++++ L + + E SK Q ++++ ++ P Sbjct: 255 GEAFYNDKMDEVLELLEAKNLLVE-------SKGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L KSDG+ Y DLA Y K Y+ F +YV+G++ + + K+L+AV Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKSVYVVGNEQAAHFKQLKAV--------- 345 Query: 380 QINVLLCELVRLYRDGMP-----------IKMSKRAGDFITLRHVVDE------------ 416 L E+ + D M K+S R G+ I L V E Sbjct: 346 -----LQEMGYDWSDDMTHVAFGLVTKGGAKLSTRKGNVILLEPTVAEAINRAASQIEAK 400 Query: 417 -------------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCR 462 VG +++F L DFD V + + P YVQYA+AR + Sbjct: 401 NPNLADKEAVAHAVGVGAIKFYDLKTDRMNGYDFDLETMVSFEGETGP--YVQYAHARIQ 458 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 SI R+A F + S D ++I + ++PR+I+ + EP +A Sbjct: 459 SILRKAD----------FTPSATTTYSLADAESWEIIKLIQDFPRIIKRTSDNFEPSIMA 508 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 + +LA F+ +++H R + N+ + RL L +A A+++ L ++GV++P Sbjct: 509 KFAINLAQSFNKYYAH------TRILDDNSERDN--RLALCYATATVLKEALRLLGVDAP 560 Query: 583 NEM 585 NEM Sbjct: 561 NEM 563 >gi|70733943|ref|YP_257583.1| arginyl-tRNA synthetase [Pseudomonas fluorescens Pf-5] gi|109895019|sp|Q4KJK0|SYR_PSEF5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|68348242|gb|AAY95848.1| arginyl-tRNA synthetase [Pseudomonas fluorescens Pf-5] Length = 578 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 138/594 (23%), Positives = 238/594 (40%), Gaps = 85/594 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE I+A + D+ IAG GFIN Sbjct: 30 IQVENTRDKTHGDFASNIAMMLAKPAGMKPRDLAEKIIAALPAHEDLSKAEIAGPGFINF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + + + G G + I+ + N MHVGH R ++GD +A Sbjct: 90 FQN-TQALAARLDAALGDDHLGVRKAGPAQRTVIDMSAPNLAKEMHVGHLRSTIIGDGVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ F G V R+ ++ D G Q L + + SDL Y + Sbjct: 149 RVLEFLGDTVIRQNHVGDWGTQFGMLM--AYLEENPITSDELSDLENFYRAAKQRFDESE 206 Query: 212 ELADKYSSELLNF----PE--EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 AD+ ++ P+ E W KD S+ KI +L + + + E + Sbjct: 207 AFADRARGLVVKLQAGDPDCLELWTKF-KDISLSHCQKIY--ELLNVKLTMADVMGESAY 263 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 + + +++++L QG + E S Q +D F++ G+ + ++ Sbjct: 264 N----DDLINVVNDLKAQGLLVE-------SNGAQCVFLDE----FKNAE-GEPLPVIIV 307 Query: 326 KSDGSYTYFAADLAYFKCKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 K+DG Y Y DLA +Y G D +Y + + + +++ AVA +KA Sbjct: 308 KADGGYLYATTDLA--AVRYRSGKLKADRALYFVDQRQALHFQQVFAVA-----RKAGFV 360 Query: 383 VLLCELVRL--------------YRDGMPIKM-------SKRAGDFIT----------LR 411 E+ + RDG +K+ +RA + LR Sbjct: 361 THPMEMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLTEAEERAYALVKEKNPQLPEADLR 420 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 + VG DSV++ L + + F+F + + N Y+ YAY R +FR+ Sbjct: 421 SIAKVVGIDSVKYADLSKHRTSDYSFNF-DLMLNFEGNTAPYLLYAYTRAAGVFRKLGKD 479 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 F + V Q EL+L LA++ ++ N P+ L YLYD+A + Sbjct: 480 FSE---------VGGQIELHAAQELELAAKLAQFGEILNNVAEKGTPHILCTYLYDVAGL 530 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + + + A RL+L + GL ++G++ +M Sbjct: 531 FSSFYEN------CPILAAETPTQMHSRLRLTELTRRTLKQGLELLGLKVLEQM 578 >gi|74211969|dbj|BAE40154.1| unnamed protein product [Mus musculus] Length = 660 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 142/601 (23%), Positives = 254/601 (42%), Gaps = 109/601 (18%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S+ L + P IAE I + + +D V IAG GFIN++L + Sbjct: 111 GDYQCNSAMGISQMLKAKEQKVSPREIAENITKHLPNNKYIDKVEIAGPGFINVHLRKDF 170 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + L+S++V+G+E ++G KV ++F S N MHVGH R ++G++++ L F+ Sbjct: 171 VSEQLTSLLVNGVELP--VLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFA 228 Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198 GY+V R ++ D G Q L L F++ + + D + E Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFGADEEFKE 288 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y V L + K I+K +++ + + R++ K + DI Sbjct: 289 RAYQCVVL------------------LQSKNPDIMKAWNL--ICDVSREEFKKIYDALDI 328 Query: 259 FISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315 + E RG+ ++DI+ +G+V + D D ++++F + Sbjct: 329 TLIE----RGESFYQDRMKDIVKEFEDKGFV--------------QVD-DGRKIVF---V 366 Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374 G V ++KSDG YTY +DLA K + +E + +IYV+ + + + + + A A + Sbjct: 367 PGCSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYVVDNGQAIHFQIIFAAAQMI 426 Query: 375 S-------------------EKKAQINVLLCELVRLY---RDGMPIKMSK---RAGDFI- 408 E K + E VRL +G+ M K + D + Sbjct: 427 GWYDPKVTLVTHVGFGVVLGEDKKKFKTRSGETVRLMDLLEEGLKRSMDKLKEKERDKVL 486 Query: 409 ---TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 L+ V +++ L F F K+ + + N Y+ YA+ R RSI Sbjct: 487 TEEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIA 545 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R A ++D + R + D E +L + +P +++ + L Y Sbjct: 546 RLA-----NIDEAMLQRAARETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDY 600 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 +Y+LA+ F + + R K+ M R+ L AVA+++ G +I+G++ Sbjct: 601 IYELATTFTEFYDSCYCVEKDRQT-GKVLKVNMWRMLLCEAVAAVMAKGFDILGIKPVQR 659 Query: 585 M 585 M Sbjct: 660 M 660 >gi|196232560|ref|ZP_03131412.1| arginyl-tRNA synthetase [Chthoniobacter flavus Ellin428] gi|196223322|gb|EDY17840.1| arginyl-tRNA synthetase [Chthoniobacter flavus Ellin428] Length = 584 Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 148/623 (23%), Positives = 248/623 (39%), Gaps = 134/623 (21%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 ++ D G TN AM+L++ +P +A+ I+ ++ + + IAG GFIN L Sbjct: 25 VQAANDARFGDYQTNIAMVLAKQQKANPRQVAQQIIDQLDVADMCAPLEIAGAGFINFRL 84 Query: 94 SPSYLRKILSSIV------VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 P +L K + + V E+ R L+ I+F S N PMHVGH R +G Sbjct: 85 KPEWLAKHFTGFLSDARLGVPQPEHARTLV-------IDFSSPNVAKPMHVGHIRSTFLG 137 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ---QALYNNDSDLPEGYYPGV 204 D L+ + F G++V R+ +I D G Q + L W+ + +AL + E Y + Sbjct: 138 DALSRIAEFVGHKVIRDNHIGDWGTQFGMILLG--WKTELNKEALAADALLEMERIYKLI 195 Query: 205 ---------YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255 L+ +EL S + N + W +++ Q R L ++ Sbjct: 196 SARCKADPATLQAAQQELVKLQSGDEENL--QLWHEMIRLSQAQFDAVYAR-----LGVR 248 Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315 D+ + E ++ ++D++ L +G E + +F S Sbjct: 249 FDVTLGESFYN----PQLKDVVVQLRDRGIARES---------------EGAWCVF-SDQ 288 Query: 316 VGDDVDRPLL---------------KSDGSYTYFAADLAYFKCKYERGF-DNMIYVMGSD 359 VG + P L KSDG+ Y DLA + + + ++YV Sbjct: 289 VGKPENDPFLIKDKDGWRDNPAMVQKSDGASNYTTTDLATLEYRLKTWSPTEIVYVTDGR 348 Query: 360 HSGYVKRLEAV--------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 + ++L A+ AA V +L + DG P K R+GD + L Sbjct: 349 QQLHFRQLFAIFGRWHSELAATVRLAHVWFGAVLGD------DGKPFKT--RSGDTVKLV 400 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKV----------------KEQS--------- 446 ++DE ++ + ++ KN E + D ++ QS Sbjct: 401 DLLDE--AEERAYALVTEKNPEASEADRREIARVVGLGAVKYADLLPNRQSDYVFSWEKM 458 Query: 447 ---KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHL 502 + N Y+Q AY R R+IFR+A + F V E + +EL L L Sbjct: 459 LSFQGNTAPYLQNAYVRIRAIFRKAGEAF----------EVGNTAVELVEPAELSLAKKL 508 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 ++ V+ P LA YL++LA+++HG + P L+ A RL L Sbjct: 509 LQFGEVLPFVLEDYRPNLLANYLFELATIYHGFYEF---CPVLKSEGATRTS----RLAL 561 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 A A ++ GL ++G+E+P M Sbjct: 562 CDATARVLKQGLGLLGIEAPERM 584 >gi|194466680|ref|ZP_03072667.1| arginyl-tRNA synthetase [Lactobacillus reuteri 100-23] gi|194453716|gb|EDX42613.1| arginyl-tRNA synthetase [Lactobacillus reuteri 100-23] Length = 562 Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 157/615 (25%), Positives = 268/615 (43%), Gaps = 115/615 (18%) Query: 17 EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP 76 E+D K ++E KI ERP+D ++G + L++ L P IA +V ++ D Sbjct: 17 EMDVK-EIEAKI------ERPKDPSNGDYAF-PTFFLAKTLHKAPQMIASELVEKVDQD- 67 Query: 77 DVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGP 135 + V +AG +IN +L + + KIL +I+ YG +G V I++ S N P Sbjct: 68 GFEKVVVAGP-YINFFLDKAQVGAKILQTILADPEHYGEIDLGHEANVTIDYSSPNIAKP 126 Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQALYNNDS 194 M +GH R ++G+ +A ++ Y + R Y+ D G Q L A W + + + Sbjct: 127 MGMGHLRSTMIGEAVARILEKVNYNLIRIDYLGDWGTQFGKLMAAYEMWGDEAEVKKDPI 186 Query: 195 DLPEGYYPGVYLKHVG------KELADKYSSELLNFPEEKW--LPIVKDYSVQAMMKIIR 246 + YY V + + E + ++L + EE W ++ S++ ++ Sbjct: 187 NTLLKYY--VRINNEADEHPEYTEAGRNWFAKLEHGDEEAWRLWHWFREVSLERFQRV-- 242 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 K L++ D F E + PI+ + D + +L P S+ + D+D Sbjct: 243 --YKMLDVNFDSFNGEAFSAQKMEEPIQLLRD---------KDLLKP--SRGAEIVDLDE 289 Query: 307 KQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHS 361 L PLL KS+G+ TY DLA + K Y G +YV+G++ Sbjct: 290 YNL------------PPLLIIKSNGTTTYITRDLATALFRKRMY--GHAKSLYVVGAEQE 335 Query: 362 GYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD----- 415 Y K+L A + QI + L+ L +G KMS R G+ ++L V++ Sbjct: 336 TYFKQLRAALKEMGFNWWDQIEHISFGLMNL--NGK--KMSTRKGNVVSLEDVLNDSIDL 391 Query: 416 --------------------EVGSDSVRFMML--WRKNSELLDFDFCK-VKEQSKENPVF 452 EVG +V F L +R+N+ ++F VK + + P Sbjct: 392 ARKQIAEKNPDLENADEVAKEVGVGAVIFHDLKNYRRNA--VNFKLEDVVKFEGETGP-- 447 Query: 453 YVQYAYARCRSIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 YVQYA AR SI R+ +D F D+D ++ +LI L +Y I+ Sbjct: 448 YVQYARARAESILRKGGIRD-FSDVDL-----------TKAGAEAWELISFLGQYSEAIK 495 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A + +P +A Y +LA F+ +++H R + + RL L AV+ ++ Sbjct: 496 RAALNYDPSVIAKYALELAKKFNQYYAHTR--------ILDKDEAQPARLALTQAVSDVL 547 Query: 571 NSGLNIIGVESPNEM 585 S L+++ +++P+EM Sbjct: 548 KSALDLLDIKAPDEM 562 >gi|85711525|ref|ZP_01042583.1| arginyl-tRNA synthetase [Idiomarina baltica OS145] gi|85694677|gb|EAQ32617.1| arginyl-tRNA synthetase [Idiomarina baltica OS145] Length = 580 Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 135/603 (22%), Positives = 244/603 (40%), Gaps = 99/603 (16%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 +I ++RPRD +HG ++N A++L++P ++P +AE ++ I + + IAG GFIN Sbjct: 29 KIQLDRPRDKSHGDFASNLALMLAKPAKMNPRQLAEKVIEAIPANTLIAKTDIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 ++ L+ L++++ S + G K + I++ S N MHVGH R A++GD + Sbjct: 89 FTIAQDQLKSQLTTMLSSA-DLGIQPAEKPMTIVIDYSSPNLAKEMHVGHLRSAIIGDAV 147 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLA-----------------LSVFWRYQQALYNND 193 + G++V R+ ++ D G Q L L F++ + ++ Sbjct: 148 SRTAEMLGHKVIRQNHVGDWGTQFGMLLAHMEELDSEAANYELSNLETFYKAAKKRFDES 207 Query: 194 SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN 253 D E V V + D Y +L N + L ++ + +K+ RDD+ A + Sbjct: 208 EDFAERARELV----VKLQSGDDYCLKLWNQFIDVSLAHCQEVYDRLGVKLTRDDVMAES 263 Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313 +D + +I++L +QG + E + Q +D F+ Sbjct: 264 AYND--------------RLPGVIEHLKQQGLLVE-------DQGAQCVFLDE----FKG 298 Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAA 372 G+ + + K G Y Y DLA + + E G D ++Y + + S + +++ +A Sbjct: 299 KE-GEPLPIIVQKKGGGYLYATTDLAAIQYRQKELGGDYLMYFVDARQSLHFEQIFTLAR 357 Query: 373 AVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE--------------- 416 + I + +DG P K R G L ++DE Sbjct: 358 KAKFIEGDIKTQHYGFGTVMGKDGRPYK--SRDGGVTKLADLLDEAERRALELLQQKNSD 415 Query: 417 ------------VGSDSVRFMMLWRKNSE--LLDFDFCKVKEQSKENPVFYVQYAYARCR 462 VG SV++ L + + + D+D E N Y+ YA+ R Sbjct: 416 LTAEQQEAVAKVVGISSVKYADLSKNRTSDYIFDWDLMLTFEG---NTAPYLLYAFTRVN 472 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 SIF + + D+D D D EL L L + V+ P+ L Sbjct: 473 SIFDKLGERSFDMDADWLLE---------DERELALANQLIRFEEVVNRVFDKAMPHFLC 523 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 YL++LA F + + + + RL+L A+ + GL ++G+ + Sbjct: 524 GYLFELAGYFSSFYEA------CPILNQEDEAVRNSRLKLARLTANTLEKGLALLGIPTL 577 Query: 583 NEM 585 +M Sbjct: 578 EKM 580 >gi|116490937|ref|YP_810481.1| arginyl-tRNA synthetase [Oenococcus oeni PSU-1] gi|122276881|sp|Q04FF6|SYR_OENOB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|116091662|gb|ABJ56816.1| arginyl-tRNA synthetase [Oenococcus oeni PSU-1] Length = 566 Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 139/602 (23%), Positives = 259/602 (43%), Gaps = 101/602 (16%) Query: 29 LDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG- 85 LD++ ++E+P+D G + LS P IA +KI ++D A Sbjct: 21 LDKLEKLVEKPKDLNRGDYAF-PTFSLSAKFHEAPQKIA------LKIADEIDRTNFANV 73 Query: 86 ---KGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 ++N ++ + ++L I+++ ++GRN G G K+ I+ S N PM +GH Sbjct: 74 KAVGPYVNFFIQRVEFTNQLLKEILLND-DFGRNNQGAGKKIVIDMSSPNIAKPMSMGHL 132 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN-TLALSVFWRYQQALYNNDSDLPEGY 200 R V+G+ ++ + +GY+ + ++ D G Q +A W + + N P Sbjct: 133 RSTVIGEAISKIAKANGYQTIKINFLGDWGTQFGLMIAAYKLWGDDKLINKN----PVDE 188 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM----------MKIIRDDLK 250 +Y+K + DK L W ++D +A+ +K ++ Sbjct: 189 LVKLYVKINKESETDKS----LKDSGRAWFKKLEDGDPEAVKLWNWFKSVSLKEFQEVYD 244 Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310 L + D E F+ P+ + LA +G + E S+ + D+ Sbjct: 245 RLGVSFDSMNGEA-FYNDKMEPV---VKMLASKGLLTE-------SQGAEIVDLP----- 288 Query: 311 FRSTMVGDDVDRPLLK-SDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLE 368 + + D+ ++K SDG+ Y DLA +++ F +YV+G++ + +++ Sbjct: 289 --NLLPKDNYPIAMIKRSDGATQYITRDLASAIYRHDAYDFAKSLYVVGAEQKDHFDQMK 346 Query: 369 AV-----------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405 A+ +S +K I V L +++ R ++S++ Sbjct: 347 AILKLAGDDWADDIEHIGFGMITMNGKKMSTRKGNI-VPLVDVLDTARQLAAEQISEKNP 405 Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSI 464 HV +EVG+ +V F L + + +DF+ K+ + + P YVQY +AR SI Sbjct: 406 GLENADHVAEEVGAGAVVFNDLQKDRNLSIDFNLEKIVQFEGDTGP--YVQYTHARAMSI 463 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 R++ + ++ F D ++ L+ YP +I+ A +EP +A Sbjct: 464 LRKSGQ-----------QAILNTGVTFVDEEAWPIVSRLSAYPEMIKRAWQLREPSIVAK 512 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 YL LA F+ +++H + + NN K+ RL LV V S++ SGLN++GV +PN Sbjct: 513 YLLSLARDFNSYYAHTK-------ILVNNEKM-QSRLSLVQGVCSVLKSGLNLLGVSAPN 564 Query: 584 EM 585 +M Sbjct: 565 QM 566 >gi|148544494|ref|YP_001271864.1| arginyl-tRNA synthetase [Lactobacillus reuteri DSM 20016] gi|184153859|ref|YP_001842200.1| arginyl-tRNA synthetase [Lactobacillus reuteri JCM 1112] gi|227363078|ref|ZP_03847214.1| arginyl-tRNA synthetase [Lactobacillus reuteri MM2-3] gi|325682815|ref|ZP_08162331.1| arginine--tRNA ligase [Lactobacillus reuteri MM4-1A] gi|166987304|sp|A5VL03|SYR_LACRD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|229470719|sp|B2G8D8|SYR_LACRJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|148531528|gb|ABQ83527.1| arginyl-tRNA synthetase [Lactobacillus reuteri DSM 20016] gi|183225203|dbj|BAG25720.1| arginyl-tRNA synthase [Lactobacillus reuteri JCM 1112] gi|227071899|gb|EEI10186.1| arginyl-tRNA synthetase [Lactobacillus reuteri MM2-3] gi|324977165|gb|EGC14116.1| arginine--tRNA ligase [Lactobacillus reuteri MM4-1A] Length = 562 Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 156/615 (25%), Positives = 269/615 (43%), Gaps = 115/615 (18%) Query: 17 EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP 76 E+D K ++E KI ERP+D ++G + L++ L P IA +V ++ + Sbjct: 17 EMDVK-EIEAKI------ERPKDSSNGDYAF-PTFFLAKTLHKAPQMIASELVEKVDQN- 67 Query: 77 DVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGP 135 + V +AG +IN +L + + KIL +I+ YG +G + V I++ S N P Sbjct: 68 GFEKVVVAGP-YINFFLDKAQVGAKILQTILADPEHYGEIDLGHQSNVTIDYSSPNIAKP 126 Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQALYNNDS 194 M +GH R ++G+ +A ++ Y + R Y+ D G Q L A W + + + Sbjct: 127 MGMGHLRSTMIGEAVARILEKVNYNLIRIDYLGDWGTQFGKLMAAYEMWGDEAEVKKDPI 186 Query: 195 DLPEGYYPGVYLKHVG------KELADKYSSELLNFPEEKW--LPIVKDYSVQAMMKIIR 246 + YY V + + E + ++L + EE W ++ S++ ++ Sbjct: 187 NTLLKYY--VRINNEADEHPEYTEAGRNWFAKLEHGDEEAWRLWHWFREVSLERFQRV-- 242 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 K L++ D F E + PI+ + D + +L P S+ + D+D Sbjct: 243 --YKMLDVNFDSFNGEAFSAQKMEEPIQLLRD---------KDLLKP--SRGAEIVDLDE 289 Query: 307 KQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHS 361 L PLL KS+G+ TY DLA + K Y G +YV+G++ Sbjct: 290 YNL------------PPLLIIKSNGTTTYITRDLATALFRKRMY--GHAKSLYVVGAEQE 335 Query: 362 GYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD----- 415 Y K+L A + QI + L+ L +G KMS R G+ ++L V++ Sbjct: 336 TYFKQLRAALKEMGFNWWDQIEHISFGLMNL--NGK--KMSTRKGNVVSLEDVLNDSIDL 391 Query: 416 --------------------EVGSDSVRFMML--WRKNSELLDFDFCK-VKEQSKENPVF 452 EVG +V F L +R+N+ ++F VK + + P Sbjct: 392 ARKQIAEKNPDLENADEVAKEVGVGAVIFHDLKNYRRNA--VNFKLEDVVKFEGETGP-- 447 Query: 453 YVQYAYARCRSIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 YVQYA AR SI R+ +D F D+D ++ +LI L +Y I+ Sbjct: 448 YVQYARARAESILRKGGIRD-FSDVDL-----------TKAGAEAWELISFLGQYSEAIK 495 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A + +P +A Y +LA F+ +++H R + + RL L AV+ ++ Sbjct: 496 RAALNYDPSVIAKYALELAKKFNQYYAHTR--------ILDKDEAQPARLALTQAVSDVL 547 Query: 571 NSGLNIIGVESPNEM 585 S L+++ +++P+EM Sbjct: 548 KSALDLLDIKAPDEM 562 >gi|289422685|ref|ZP_06424525.1| arginine--tRNA ligase [Peptostreptococcus anaerobius 653-L] gi|289156864|gb|EFD05489.1| arginine--tRNA ligase [Peptostreptococcus anaerobius 653-L] Length = 570 Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 146/575 (25%), Positives = 255/575 (44%), Gaps = 108/575 (18%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119 P IAE + I++ V G G++N +++ L +K+++ + YG++ +G Sbjct: 54 PNMIAEDLSTSIELGEGVTKCINLG-GYVNFFVAKDALAKKVITQVFDERENYGKSDLGG 112 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G V I++ S N P H+GH R V+G+ L + + GY+V R ++ D G Q L + Sbjct: 113 GKTVVIDYSSPNIAKPFHIGHIRTTVIGNALYKIYSSQGYKVERINHLGDYGTQFGKLIV 172 Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE-----EKWLPIV 233 + W + A+ +K + K L ++ E + PE W + Sbjct: 173 AYKLWGDKSAV------------EAEPIKELLK-LYVRFHDEAESKPEMEDEARAWFTRL 219 Query: 234 K--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290 + D + + + RD+ LK +D+ E DF D+ A + + Y Sbjct: 220 ENNDPEAKELWQWFRDESLKEFQRVYDLL--EIDF------------DSYAGESF-YSDK 264 Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGD--DVDRP---LLKSDGSYTYFAADLA---YFK 342 +P + QK + Q TM+ D DV+ P + K+DGS Y DLA Y K Sbjct: 265 MPAVLEELRQKNLLVESQ----GTMIVDLEDVNLPPALIQKNDGSTLYITRDLAAAFYRK 320 Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAV-----------------------AAAVSEKKA 379 Y+ FD IYV+GS + K+L V +S +K Sbjct: 321 NTYD--FDKAIYVVGSQQELHFKQLFNVIRKMGYDWYKDMNHVQFGMVALEEGTMSTRKG 378 Query: 380 QINVLLCELVRLYRDGM-PIKMSKR--AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 ++ V L +++R D I M K AGD + + EVG +V F L NS + D Sbjct: 379 RV-VFLEDVLRQAIDKTREIIMEKNPGAGD---IDKIAKEVGVGAVVFQEL--SNSRIKD 432 Query: 437 FDFCKVKEQSKENPVF-YVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESE 490 + F + S E YVQY +ARC ++ R+A D+ +++FDL S+ Sbjct: 433 YTFSWSRTLSFEGETGPYVQYTHARCCALKRKANLEISADLVANINFDLL--------SD 484 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550 D+S++ ++ + + I+ + EP+ + ++ DLA F+ + + NP + Sbjct: 485 EDSSDVLKVIET--FNKSIQTSMRKNEPHIVTRFVLDLAQAFNKFYHN---NP----IIV 535 Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++L + RL LV + I + L+++G+++P +M Sbjct: 536 EDKELMIARLALVESTRQTIENALDLLGMKAPEKM 570 >gi|21911345|ref|NP_665613.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS315] gi|28896719|ref|NP_803069.1| arginyl-tRNA synthetase [Streptococcus pyogenes SSI-1] gi|25453284|sp|Q8K5J2|SYR_STRP3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|21905560|gb|AAM80416.1| putative arginyl-tRNA synthetase [Streptococcus pyogenes MGAS315] gi|28811973|dbj|BAC64902.1| putative arginyl-tRNA synthetase [Streptococcus pyogenes SSI-1] Length = 563 Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 138/590 (23%), Positives = 255/590 (43%), Gaps = 89/590 (15%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G L+ A L++ L P IA + +I + + V G +IN + Sbjct: 26 LLETPKNSDMGDLAF-PAFSLAKVLRKAPQMIASELAEQID-ESQFEKVVAVGP-YINFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + + ++L ++ +G +Y + G+G V I+ S N P +GH R V+GD+LA Sbjct: 83 LDKAKISSQVLEQVITAGSDYAQQDEGQGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + A GY+ + ++ D G Q L ++ W + A+ + D Y + + Sbjct: 143 HIFAKMGYKPVKINHLGDWGKQFGMLIVAYKKWGDEAAVQAHPIDELLKLYVRINAEAET 202 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 D+ + E W ++D +A + + RD+ L N +D D + Sbjct: 203 DPTVDEEARE--------WFRKLEDGDKEATELWQWFRDESLLEFNRLYDQLHVTFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + ++++ L + + E SK Q ++++ ++ P Sbjct: 255 GEAFYNDKMDEVLELLEAKNLLVE-------SKGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370 L KSDG+ Y DLA Y K Y+ F +YV+G++ + + K+L+AV Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKSVYVVGNEQAAHFKQLKAVLKEMGYDWS 354 Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 A +S +K + +LL V + ++ + + V Sbjct: 355 DDMTHVAFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKEAVAHA 413 Query: 417 VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 VG +++F L DFD V + + P YVQYA+AR +SI R+A Sbjct: 414 VGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAD------ 465 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 F + S D ++I + ++PR+I+ + EP +A + +LA F+ + Sbjct: 466 ----FTPSATTTYSLADAESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQSFNKY 521 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++H R + N+ + RL L +A A+++ L ++GV++PNEM Sbjct: 522 YAH------TRILDDNSERDN--RLALCYATATVLKEALRLLGVDAPNEM 563 >gi|116671696|ref|YP_832629.1| arginyl-tRNA synthetase [Arthrobacter sp. FB24] gi|116611805|gb|ABK04529.1| arginyl-tRNA synthetase [Arthrobacter sp. FB24] Length = 585 Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 151/598 (25%), Positives = 257/598 (42%), Gaps = 102/598 (17%) Query: 45 LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104 + NAAM L++ +GL P A IV +++D +V I+G GFINL +++ ++L++ Sbjct: 33 IQVNAAMALAKKVGLPPRDAAARIVEALELDGLCTAVEISGPGFINLTFDGTWIEELLNA 92 Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164 S + G + +V +++ S N MHVGH R VVGD+L ++ G+ V R+ Sbjct: 93 -QASQPQGGPET--QARRVVVDYSSPNVAKEMHVGHLRTTVVGDSLVRVLEALGHTVIRQ 149 Query: 165 YYINDAGAQINTL--------------AL-----SVFWRYQQALYNNDSDLPEGYYPGVY 205 +I D G L AL S F++ +A +++ P+ + Sbjct: 150 NHIGDWGTPFGMLIEHWLEIGEDSPEAALLVEDPSAFYQAARAKFDSSDGSPDSFATRAR 209 Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 L+ V + A + + E+ W +V D+S + I L ++++ D E + Sbjct: 210 LRVVSLQSAHEETLEV-------WQRLV-DHS-KVYFNAIYATL-GVSLEDDHIAGESSY 259 Query: 266 HRGDPSPIRDIIDNLARQGY--VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR- 322 DP + + L +G V EG L C F + G D + Sbjct: 260 ---DPH-LAQLCQELEERGLARVSEGAL----------C-------TFPAGFKGRDGEPL 298 Query: 323 PLL--KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAA------- 372 PL+ KSDG Y Y DLA + + E D ++YV+G+ + +++ + A Sbjct: 299 PLIIRKSDGGYGYATTDLATIRYRVQELHADRILYVVGAPQNVHLRMVFETAREAGWLPD 358 Query: 373 AVSEKKAQINVLLCELVRLY--RDGMPIKMSKRAGDFI-TLRHVVD-------------- 415 V QI +L E ++ R G P+K+ + + R VVD Sbjct: 359 TVEATHVQIGNVLGEDGKILKSRSGTPVKLMALLEEAVDRARAVVDSSRPDLSDEERAVT 418 Query: 416 --EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 +VG +V++ L + FDF ++ S N YVQYA AR RSI R+A+ Sbjct: 419 ARQVGIGAVKYADLAVGHDTEYVFDFDRMLALSG-NTGPYVQYAAARIRSILRKAEAAAS 477 Query: 474 DLDFDLFPRNVIPQESE------FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 P + + + +E L +HL EY + EP++L YL++ Sbjct: 478 PAG---EPGEAAGEPTAAVSIAVVEPAERALALHLLEYGATLRKVGELLEPHRLCAYLFE 534 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L+ +F + + P L+ + + RL L V ++ GL+++G+E+P M Sbjct: 535 LSQLFTSFYD---QCPVLK----ADESVRQSRLALCALVLHRLSEGLDLLGIETPENM 585 >gi|254429152|ref|ZP_05042859.1| arginyl-tRNA synthetase [Alcanivorax sp. DG881] gi|196195321|gb|EDX90280.1| arginyl-tRNA synthetase [Alcanivorax sp. DG881] Length = 584 Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 138/596 (23%), Positives = 257/596 (43%), Gaps = 86/596 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + I+R +D +HG +TN A++L++P G+ P +AE ++A + D V V IAG GFIN Sbjct: 30 VQIDRTKDKSHGDFATNIALMLAKPAGMKPRDLAEKLIAALPSDSAVAKVDIAGPGFINF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + +L +L S + G + + V +++ S N MHVGH R ++GD + Sbjct: 90 FQADDWLTGLLDSALADDF-LGIDRPEQPQTVVVDYSSPNLAKEMHVGHLRSTIIGDAVV 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 + F G+ V R+ N G + + + +Q + +L K Sbjct: 149 RTLEFLGHTVIRQ---NHVGDWGTQFGMLLAYLEEQKAEEGERELSRELANLETFYRAAK 205 Query: 212 ELADKYSSELLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHD---IFISED 263 + D+ + F + +VK DY + + + L +D + ++ Sbjct: 206 QRFDESDT----FADRARALVVKLQSGDDYCLSLWAEFNQVSLSHCQAIYDRLGVSLTPS 261 Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 D RG+ + + ++ +L +G + E S+ Q MD F++ G+ + Sbjct: 262 DV-RGESAYNDDLAQVVADLDSKGLLSE-------SQGAQCVFMDA----FKNKE-GEPL 308 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKR---LEAVAAAV 374 + K+DG Y Y +DLA + Y G D M+Y + + + ++ L +AA V Sbjct: 309 PVIVRKADGGYLYATSDLAALR--YRAGTLQADRMLYFVDQRQALHFQQMFTLAKLAAFV 366 Query: 375 SEKKAQINVLLCEL----VRLY--RDGMPIKM-------SKRAGDFIT----------LR 411 E+ ++ + R + RDG +K+ +RA + LR Sbjct: 367 PEQTELAHMGFGTMNGPDGRPFKTRDGGTVKLVDLLDEAEQRAFALVQEKNPQLDEDELR 426 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 + VG +V++ L + S F+F ++ + N Y+ YAY R S+FR+A+ Sbjct: 427 TIARSVGIGAVKYADLSKNRSSDYIFNFEQML-SFEGNTAPYLLYAYTRVASVFRKAE-- 483 Query: 472 FPDLDFDLFPRNVIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 R++ +F + +E L L ++ V++N +P+ L+ YLYD+ Sbjct: 484 ----------RDMASVSGDFLLNEDAEQALAARLVQFAEVLQNVADKGQPHLLSTYLYDV 533 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 A +F + H + + + + RL+L A + G+ ++G+ SP E Sbjct: 534 AGLFSSFYEH------CPILSSEDEGIRNSRLKLAALTARTLKHGMELLGL-SPLE 582 >gi|189054553|dbj|BAG37326.1| unnamed protein product [Homo sapiens] Length = 660 Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 141/598 (23%), Positives = 254/598 (42%), Gaps = 103/598 (17%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S+ L ++P IAE I + + ++ V IAG GFIN++L + Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDF 170 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + L+S++V+G++ +G+ KV ++F S N MHVGH R ++G++++ L F+ Sbjct: 171 VSEQLTSLLVNGVQLP--ALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFA 228 Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198 GY+V R ++ D G Q L L VF++ + ++ + + + Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKNRFDTEEEFKK 288 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y V L GK N K ++ D S Q + KI AL++ + Sbjct: 289 RAYQCVVLLQ-GK-----------NPDITKAWKLICDVSRQELNKI----YDALDVS--L 330 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + F++ + DI+ +G+V G D ++++F + G Sbjct: 331 IERGESFYQ---DRMNDIVKEFEDRGFVQVG---------------DGRKIVF---VPGC 369 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV--- 374 + ++KSDG YTY +DLA K + +E D +IYV+ + S + + + A A + Sbjct: 370 SIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHFQTIFAAAQMIGWY 429 Query: 375 ----------------SEKKAQINVLLCELVRLYR---DGMPIKMSK---RAGDFI---- 408 E K + E VRL +G+ M K + D + Sbjct: 430 DPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSMDKLKEKERDKVLTAE 489 Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 L V +++ L F F K+ + + N Y+ YA+ R RSI R A Sbjct: 490 ELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA 548 Query: 469 KDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 ++D ++ + + D E +L + +P +++ + L Y+Y+ Sbjct: 549 -----NIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYE 603 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA+ F + + R K+ M R+ L AVA+++ G +I+G++ M Sbjct: 604 LATAFTEFYDSCYCVEKDRQT-GKILKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660 >gi|157427804|ref|NP_001098808.1| arginyl-tRNA synthetase, cytoplasmic [Bos taurus] gi|300681170|sp|A7YW98|SYRC_BOVIN RecName: Full=Arginyl-tRNA synthetase, cytoplasmic; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|157278917|gb|AAI34469.1| RARS protein [Bos taurus] gi|296485074|gb|DAA27189.1| arginyl-tRNA synthetase [Bos taurus] Length = 660 Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 146/609 (23%), Positives = 264/609 (43%), Gaps = 77/609 (12%) Query: 20 CKIKVEKKILDR--IVIERPRDCAHGHLSTNAAMILSRPLG-----LDPLTIAELIVARI 72 C IK +L+ +++ + G N+AM + + L ++P IAE IV + Sbjct: 86 CAIKAAYPVLENPPLIVTPSQQPKFGDYQCNSAMGICQMLKTKEQKVNPREIAENIVKHL 145 Query: 73 KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP 132 + ++ V IAG GFIN++L ++ + L++++V+G++ IG+ KV ++F S N Sbjct: 146 PDNEYIEKVEIAGPGFINIHLRKGFVSQQLTNLLVNGVKIPS--IGENKKVIVDFSSPNI 203 Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192 MHVGH R ++G+++ L F+GY V R ++ D G Q L + ++ L + Sbjct: 204 AKEMHVGHLRSTIIGESMCRLFEFAGYNVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVS 263 Query: 193 D--SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250 DL + +Y + +E K + + + + K I+K + + + + R + Sbjct: 264 PPIGDL-QAFYKESKKRFDTEEEFKKRAYQCVVLLQSKNPDIIKAWKL--ICDVSRQEFN 320 Query: 251 ALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307 + DI + E RG+ + DI+ +G+V + D D + Sbjct: 321 KIYEALDISLIE----RGESFYQDRMHDIVKEFEDRGFV--------------QVD-DGR 361 Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKR 366 +++F + G V ++KSDG YTY +DLA K + +E D +IYV+ + S + + Sbjct: 362 KIVF---VPGCSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSLHFQT 418 Query: 367 LEAVA--------AAVSEKKAQINVLLCE--------------LVRLYRDGMPIKMSK-- 402 + A A A V+L E L+ L +G+ M K Sbjct: 419 VFGAAQMIGWYDPAVTRVSHAGFGVVLGEDKKKFKTRSGETVRLIDLLEEGLKRSMDKLK 478 Query: 403 ---RAGDFIT--LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457 R T L+ V +++ L F F K+ + + N Y+ YA Sbjct: 479 EKERDKVLTTEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYA 537 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQ 516 + R RSI R A ++D ++ + E D E +L + +P V++ Sbjct: 538 FTRIRSIARLA-----NIDEEMLRKAAHETEIILDHEKEWKLGRCILRFPEVLQKILDDL 592 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 + L Y+Y+LA+ F + + R K+ M R+ L AVA+++ G +I Sbjct: 593 LLHTLCDYIYELATTFTEFYDSCYCVEKDR-QSGEVLKVNMWRMLLCEAVAAVMAKGFDI 651 Query: 577 IGVESPNEM 585 +G++ M Sbjct: 652 LGIKPVQRM 660 >gi|56413172|ref|YP_150247.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362098|ref|YP_002141735.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|213163291|ref|ZP_03349001.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213426390|ref|ZP_03359140.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|81361941|sp|Q5PMZ2|SYR_SALPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|238690743|sp|B5BH46|SYR_SALPK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|56127429|gb|AAV76935.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093575|emb|CAR59038.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 577 Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 140/586 (23%), Positives = 241/586 (41%), Gaps = 88/586 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + + V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQV 96 Query: 103 SSIVVSGIEYGRNLIGKGTK--VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + S R + + T+ + +++ + N MHVGH R ++GD + F G+ Sbjct: 97 QQALTS----DRLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 V R ++ D G Q L + W +Q N D+ G Y A K+ E Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 202 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278 F E +VK +Q+ R+ + L DI ++++ + R + + RD + Sbjct: 203 DEAFAERARNYVVK---LQSGDTYFREMWRKLV---DITMTQNQITYDRLNVTLTRDDVM 256 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335 + + GI+ K+K + + ++F GD + + K DG Y Y Sbjct: 257 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 315 Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387 D+A K +YE D ++Y + S + V++ V +V + ++L Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 374 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420 +DG P K R G + L ++DE VG Sbjct: 375 -----KDGKPFK--TRTGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIG 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479 +V++ L + + FD+ + + N Y+QYAY R S+FR+A D+D L Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQAL 481 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 VI E E QL L ++ + P+ + YLYD+A +F G + H Sbjct: 482 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 536 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N + RL+L A + GL+ +G+E+ M Sbjct: 537 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|308187218|ref|YP_003931349.1| Arginyl-tRNA synthetase [Pantoea vagans C9-1] gi|308057728|gb|ADO09900.1| Arginyl-tRNA synthetase [Pantoea vagans C9-1] Length = 576 Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 140/597 (23%), Positives = 235/597 (39%), Gaps = 111/597 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG P +AE ++ + + V IAG GFIN++L ++L K Sbjct: 37 GDYQANGIMAVAKKLGQAPRQLAEAVIQHLDLTGIASKVEIAGPGFINIFLDHNWLAKHA 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 +S G L T V +++ + N MHVGH R ++GD + F G++V Sbjct: 97 RE-ALSLPRLGVQLAEPQTIV-VDYSAPNVAKEMHVGHIRSTIIGDAAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204 R ++ D G Q L L F+R + Y+ D + E V Sbjct: 155 RANHVGDWGTQFGMLIAFLEKQQNENHAEMALADLEGFYREAKRTYDEDPEFAERARGYV 214 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 G E + +L++ + I +V + R+D+ ++ +D+ Sbjct: 215 VKLQGGDEYCRQMWKKLVDITMSQNQKIYDRMNV----TLTRNDVMGESLYNDML----- 265 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 P I+ +L ++G E S+ +D Q G+ + + Sbjct: 266 -----PG----IVADLKQKGLAVE-------SEGATVVYLDEFQ-----NKEGEPMGVII 304 Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSE 376 K DG Y Y D+A K +YE D ++Y + S + V++ V +V Sbjct: 305 QKKDGGYLYTTTDIACAKYRYETLKADRVLYYIDSRQHQHLVQAWTIVRKAGYVPESVPL 364 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN----- 431 + ++L +DG P K R+G I L ++DE + + ++ KN Sbjct: 365 EHHAFGMMLG------KDGRPFKT--RSGGTIKLSDLLDEAWQRA--YTLVREKNPEMSE 414 Query: 432 ------SELLDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRSIFRQA 468 +E++ K + SK N Y+QYAY R S+FR+A Sbjct: 415 AEVKALAEVMGISAVKYADLSKSRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKA 474 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 LD ++ VI +E E QL L ++ VI P+ + YLYDL Sbjct: 475 GIDADSLDAEI----VISEERE-----AQLATRLLQFEEVITQVARDGTPHVMCAYLYDL 525 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A +F G + H + A + + RLQL A + GL+ +G+++ M Sbjct: 526 AGLFSGFYEH------CPILSAESDATRLSRLQLAALTAKTLKQGLDTLGIDTVERM 576 >gi|16765251|ref|NP_460866.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167994213|ref|ZP_02575305.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|325530298|sp|E1WGF0|SYR_SALTS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|325530299|sp|P0CL51|SYR_SALTY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|16420446|gb|AAL20825.1| arginine tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|205327860|gb|EDZ14624.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261247079|emb|CBG24900.1| ArgRS [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993894|gb|ACY88779.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158429|emb|CBW17938.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912903|dbj|BAJ36877.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321224552|gb|EFX49615.1| Arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130193|gb|ADX17623.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332988802|gb|AEF07785.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 577 Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 140/586 (23%), Positives = 242/586 (41%), Gaps = 88/586 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + + V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQV 96 Query: 103 SSIVVSGIEYGRNLIGKGTK--VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + S R + + T+ + +++ + N MHVGH R ++GD + F G+ Sbjct: 97 QQALAS----DRLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 V R ++ D G Q L + W +Q N D+ G Y A K+ E Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 202 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278 F E +VK +Q+ R+ + L DI ++++ + R + + RD + Sbjct: 203 DEAFAERARNYVVK---LQSGDTYFREMWRKLV---DITMTQNQITYDRLNVTLTRDDVM 256 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335 + + GI+ K+K + + ++F GD + + K DG Y Y Sbjct: 257 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 315 Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387 D+A K +YE D ++Y + S + V++ V +V + ++L Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 374 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420 +DG P K RAG + L ++DE VG Sbjct: 375 -----KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIG 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479 +V++ L + + FD+ + + N Y+QYAY R S+FR+A ++D L Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----NIDEQAL 481 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 VI E E QL L ++ + P+ + YLYD+A +F G + H Sbjct: 482 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 536 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N + RL+L A + GL+ +G+E+ M Sbjct: 537 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|209523094|ref|ZP_03271650.1| arginyl-tRNA synthetase [Arthrospira maxima CS-328] gi|209496245|gb|EDZ96544.1| arginyl-tRNA synthetase [Arthrospira maxima CS-328] Length = 600 Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 151/592 (25%), Positives = 248/592 (41%), Gaps = 95/592 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AM L++ L +P IA I+ ++ID IAG GFINL L YL L Sbjct: 55 GDYQCNVAMSLTKRLKSNPRQIASTIIEHLQIDDICSPPEIAGPGFINLRLKSEYLETQL 114 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 ++ ++ G G V ++F S N MHVGH R ++GD +A ++ F G++V Sbjct: 115 NA-KLTDPRLGIAPNGNPQNVIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFEGHQVL 173 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + +Y AL D DL E Y A K Sbjct: 174 RLNHVGDWGTQFGMLITYLQEKYPSALTTADVLDIGDLVEFYRQ-----------AKKRF 222 Query: 219 SELLNFPEEKWLPIVKDYS--------VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 E F E +V+ S + + R + + + + DI ++E RG+ Sbjct: 223 DEDEEFKEASREQVVRLQSGAEDSRRAWELLCDQSRREFQQIYDRLDIKLTE----RGES 278 Query: 271 --SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 +P + +++ +L G + E KC L + GD + + KS Sbjct: 279 FYNPMLAEVVADLEASGLLVE--------DQGAKCVF----LEGFTNKEGDPLPLIVQKS 326 Query: 328 DGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAV------------ 374 +G Y Y DLA + + G +IYV + + + ++ VA V Sbjct: 327 NGGYNYATTDLAAVRHRINTEGATRLIYVTDAGQANHFAQVWQVARRVGWIPDGVDVVHV 386 Query: 375 ----------------SEKKAQINVLLCELVRLYRDGMPIKMSK--RAGDFITLRHVVDE 416 S + ++ LL E V+ ++ + ++ + RA + HV + Sbjct: 387 PFGLVKGEDGKKLKTRSGETVRLRDLLDEAVKRAQEDLETRLQQEGRAESPEFVHHVAEV 446 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG D+V++ L + + F F K+ + N Y+ YAY R + I R+ +D Sbjct: 447 VGIDAVKYADLSQNRTSDYIFSFDKMLS-LQGNTAPYMLYAYVRIQGISRKGS-----ID 500 Query: 477 FD-LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE--PYKLAFYLYDLASVFH 533 F+ + R I + D SEL L HL + VI+ T+AQE P +L YL++L+ F+ Sbjct: 501 FEQVGDRASIHLQ---DPSELTLAKHLLQLHEVID--TVAQELLPNRLCQYLFELSQKFN 555 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P L+ + + RL L H A + GL+++G+ + M Sbjct: 556 QFYDRC---PVLKADECDRAS----RLALCHLTAETLRLGLSLLGISVLDRM 600 >gi|168234027|ref|ZP_02659085.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194468774|ref|ZP_03074758.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194455138|gb|EDX43977.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205331975|gb|EDZ18739.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 577 Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 141/586 (24%), Positives = 238/586 (40%), Gaps = 88/586 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + + V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + S R + + T+ I ++ + N MHVGH R ++GD + F G+ Sbjct: 97 QQALAS----DRLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 V R ++ D G Q L + W +Q N D+ G Y A K+ E Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 202 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278 F +VK S A + + L DI ++++ + R + + RD + Sbjct: 203 DEAFAARARNYVVKLQSGDAYFREMWRKLV------DITMTQNQITYDRLNVTLTRDDVM 256 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335 + + GI+ K+K + + ++F GD + + K DG Y Y Sbjct: 257 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 315 Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387 D+A K +YE D ++Y + S + V++ V +V + ++L Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 374 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420 +DG P K RAG + L ++DE VG Sbjct: 375 -----KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPNMPADELEKLANAVGIG 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479 +V++ L + + FD+ + + N Y+QYAY R S+FR+A D+D L Sbjct: 428 AVKYADLSKNRTTDYIFDWDNMLA-FEGNTAPYMQYAYTRVLSVFRKA-----DIDEQAL 481 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 VI E E QL L ++ + P+ + YLYD+A +F G + H Sbjct: 482 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 536 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N + RL+L A + GL+ +G+E+ M Sbjct: 537 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|330977161|gb|EGH77119.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 578 Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 139/602 (23%), Positives = 248/602 (41%), Gaps = 101/602 (16%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE ++A + D V V IAG GF+N Sbjct: 30 IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + + ++ G +V ++ + N MHVGH R ++GD +A Sbjct: 90 FQN-TAALAARLDAALADAHLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ F G V R+ ++ D G Q L + + + A + SDL E +Y Sbjct: 149 NVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263 A + E F E +VK + A + K +++ H ++ ++ Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLALWTRFKDISLSHCQETYERLNVKLTPA 255 Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 D G+ + + +++++L G + E S Q ++ FR+ DD Sbjct: 256 DVM-GESAYNDDLANVVNDLKASGLLVE-------SNGAQCVFLEE----FRTA---DDT 300 Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374 P++ K+ G Y Y DLA ++ K + D ++Y + + + +++ VA A Sbjct: 301 PLPVIVQKAGGGYLYAPTDLAAIRYRSKVLKA-DRVLYFVDQRQALHFQQVFEVARRAGF 359 Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410 Q+ + + RDG +K+ +RA + L Sbjct: 360 VHDGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEAEL 419 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKLGS 478 Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 FD ++ PQE E L LA++ + N P+ L YLYD Sbjct: 479 A-----FDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYD 526 Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 LA +F + + G ENP + RL+L + GL+++G+E+ Sbjct: 527 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 576 Query: 584 EM 585 M Sbjct: 577 RM 578 >gi|119487496|ref|ZP_01621106.1| arginyl-tRNA-synthetase [Lyngbya sp. PCC 8106] gi|119455665|gb|EAW36801.1| arginyl-tRNA-synthetase [Lyngbya sp. PCC 8106] Length = 585 Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 142/578 (24%), Positives = 237/578 (41%), Gaps = 79/578 (13%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AM L++ L +P IA I+ +++I + IAG GFINL L P YL L Sbjct: 40 GDYQCNVAMSLTKALKSNPRAIATQIIEKLEISDLCEPPEIAGPGFINLRLKPEYLEAQL 99 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 ++I+ G + KV ++F S N MHVGH R ++GD++A ++ F +V Sbjct: 100 NNILTDE-RLGIPTVDNPQKVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFLDDDVL 158 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDS----DLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + Y +AL D+ DL Y E + Sbjct: 159 RLNHVGDWGTQFGMLITYLREVYPEALTTADALDIGDLVAFYRQAKVRFDEDNEFKEASR 218 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRD 275 E++ L + S +A + + + +D+ + RG+ S + + Sbjct: 219 QEVVK------LQAGAEDSRRAWTILCEQSRREFQVIYDLLDIQLK-ERGESFYNSFLSE 271 Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCD-MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334 ++ +L + G + E KC +D Q G+ + + KSDG Y Y Sbjct: 272 VVKDLEKTGLLEE--------NQGAKCVFLDGFQ-----NKEGEALPLIVQKSDGGYNYA 318 Query: 335 AADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLY 392 DLA + + + D MIYV S + + ++ VA +++V+ + L Sbjct: 319 TTDLAALRYRINQDQADRMIYVTDSGQANHFTQVWQVARKAGWIPDEVDVIHVPFGLVLG 378 Query: 393 RDGMPIKMSKRAGDFITLRHVVDE-------------------------------VGSDS 421 DG K+ R+G+ + LR ++DE VG + Sbjct: 379 EDGK--KLKTRSGETVRLRDLLDEAINRARKDLETRLKEEGRTESKEFIENVAQVVGMSA 436 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 V++ L + + F F K+ + N Y+ YAY R + I R+ ++DF Sbjct: 437 VKYADLSQNRTSNYVFSFDKML-SLQGNTAPYLLYAYVRIQGIRRKG-----EIDFKQVG 490 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 Q E +E L HL + VIE I P +L YL++L+ F+ + + Sbjct: 491 TEAKMQLQE--EAEFTLAKHLLQLNEVIETVAIELLPNRLCQYLFELSQKFNQFYD---Q 545 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 P L+ A + RL L A + GL+++G+ Sbjct: 546 CPVLKAEDAQR----ISRLGLCDLTARTLKLGLSLLGI 579 >gi|152993784|ref|YP_001359505.1| arginyl-tRNA synthetase [Sulfurovum sp. NBC37-1] gi|151425645|dbj|BAF73148.1| arginyl-tRNA synthetase [Sulfurovum sp. NBC37-1] Length = 565 Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 153/606 (25%), Positives = 254/606 (41%), Gaps = 139/606 (22%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AM LS+ L +P IA I+ + V IAG GFINL+L+ +++ + Sbjct: 36 GDYQFNGAMALSKKLRKNPREIASEIMEHLDFSGIVAKAEIAGPGFINLWLNDTWVAQAC 95 Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 GIE N I KV +++ N MHVGH R ++GDTLA+L+ F G Sbjct: 96 EKARADERLGIEKTSNPI----KVVVDYSGPNMAKQMHVGHLRSTIIGDTLANLLEFLGD 151 Query: 160 EVTREYYINDAGAQINTLA----------------LSVFWRYQQALYNNDSDLPEGYYPG 203 EV R+ +I D G Q L L F++ + ++ D + Sbjct: 152 EVIRQNHIGDWGTQFGMLIAYLEERGEDGSGSLKDLEQFYKDAKKRFDEDEAFADKAREY 211 Query: 204 VYLKHVGKE----LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259 V G E L K+ L EE + + +++ R+D+KA + F Sbjct: 212 VVKIQSGDEHCLNLWQKFIDISLGHCEEVYDKLC--------VRLTREDVKA-----ESF 258 Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319 +ED + +++ +LA++G + E S+ Q C + F D+ Sbjct: 259 YNED---------LPEVVADLAKEGRLRE-------SEGAQ-C------VFFEE----DE 291 Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378 + + K DG Y Y DLA + + G + YV+ + + K++ V Sbjct: 292 IPVIVQKGDGGYLYATTDLAALRYRANILGAKRISYVVDARQGEHFKQIFKV-------- 343 Query: 379 AQINVLLCELVRLY---------RDGMPIKMSKRAGDFITLRHVVDE------------- 416 A+++ + + VRL + G P K R G + L ++DE Sbjct: 344 AKMSGFVPKDVRLEHVAFGTMMDKGGKPFKT--RDGGTVKLIDLLDEAVVKAKAAIKEKD 401 Query: 417 -------------VGSDSVRF--MMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYAR 460 +G +V++ + + R+++ + ++D K S E N Y+QYAYAR Sbjct: 402 DYSEEEVEKLAKTIGIGAVKYADLSINRESNYIFNWD----KMLSFEGNTSLYMQYAYAR 457 Query: 461 CRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 +SIFR+ DI D+ VI D E +L V L + ++E A P Sbjct: 458 IQSIFRRYGGDIKGDI--------VIT-----DALEHRLGVMLLRFEEILERAAEDAAPN 504 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 ++ YLY+L ++F + +NP L+ + + RL L A I GL+I+G+ Sbjct: 505 QITTYLYELVTLFMRFYE---QNPILK--EGVDEATKQSRLALADMTAKTIKQGLDILGI 559 Query: 580 ESPNEM 585 E +++ Sbjct: 560 EVVDKL 565 >gi|330951295|gb|EGH51555.1| arginyl-tRNA synthetase [Pseudomonas syringae Cit 7] Length = 578 Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 139/602 (23%), Positives = 248/602 (41%), Gaps = 101/602 (16%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE ++A + D V V IAG GF+N Sbjct: 30 IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + + ++ G +V ++ + N MHVGH R ++GD +A Sbjct: 90 FQN-TAALAARLDAALADAHLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ F G V R+ ++ D G Q L + + + A + SDL E +Y Sbjct: 149 NVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263 A + E F E +VK + A + K +++ H ++ ++ Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLALWTRFKDISLSHCQETYERLNVKLTPA 255 Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 D G+ + + +++++L G + E S Q ++ FR+ DD Sbjct: 256 DVM-GESAYNDDLANVVNDLKATGLLVE-------SNGAQCVFLEE----FRTA---DDT 300 Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374 P++ K+ G Y Y DLA ++ K + D ++Y + + + +++ VA A Sbjct: 301 PLPVIVQKAGGGYLYATPDLAAIRYRSKVLKA-DRVLYFVDQRQALHFQQVFEVARRAGF 359 Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410 Q+ + + RDG +K+ +RA + L Sbjct: 360 VHDGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEAEL 419 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKLGS 478 Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 FD ++ PQE E L LA++ + N P+ L YLYD Sbjct: 479 A-----FDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYD 526 Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 LA +F + + G ENP + RL+L + GL+++G+E+ Sbjct: 527 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 576 Query: 584 EM 585 M Sbjct: 577 RM 578 >gi|56750043|ref|YP_170744.1| arginyl-tRNA synthetase [Synechococcus elongatus PCC 6301] gi|81596947|sp|Q5N643|SYR_SYNP6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|56685002|dbj|BAD78224.1| arginyl-tRNA-synthetase [Synechococcus elongatus PCC 6301] Length = 584 Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 153/591 (25%), Positives = 239/591 (40%), Gaps = 106/591 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G +N AM L++ LG P IAE +V + + + IAG GFIN L PSYL L Sbjct: 40 GDYQSNVAMSLAKQLGQPPRAIAETLVQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQL 99 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + G + +V ++F S N MHVGH R ++GD++A ++ F G+EV Sbjct: 100 QQLQTDE-RLGIQPVSPPQRVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVL 158 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPG--------VYLKHVG 210 R ++ D G Q L + +Y QAL D SDL Y + + Sbjct: 159 RLNHVGDWGTQFGMLIAFLQEQYPQALSQPDALDISDLVAFYKQAKARFDEDPSFQETAR 218 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 + + D S E + W ++ D S + KI L+IQ + RG+ Sbjct: 219 QRVVDLQSGEATA--RQAW-QLLCDQSRREFQKIY----DRLDIQLE--------ERGES 263 Query: 271 --SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-- 325 +P + I+++L R G + E D + + + PL+ Sbjct: 264 FYNPYLPAIVEDLRRLGLLVE--------------DQGAQCVFLEGFQNKEGQPLPLIVQ 309 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKRLEAVA--AAVSEKKAQ 380 KSDG Y Y DLA +Y G D +IYV S + + ++ VA A AQ Sbjct: 310 KSDGGYNYATTDLAAL--RYRLGQDQAQRIIYVTDSGQANHFAQVFQVAQRAGWLPAAAQ 367 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416 I + LV+ DG K+ RAGD + LR ++DE Sbjct: 368 IEHVPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVDRARTDLTTRIAAEERSETPEF 424 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 VG +V++ L + + F F K+ + N Y+ YAY R + I R+ Sbjct: 425 IEAVAQAVGLGAVKYADLSQNRNSNYIFSFDKMLA-LQGNTAPYLLYAYVRIQGIARKGG 483 Query: 470 DIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 F LD P +E + +E L + + V++ P +L YL++L Sbjct: 484 IDFAQLD---------PVAAELTEPTERSLAKQVLQLGEVLDEVARDLLPNRLCSYLFEL 534 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 + F+ + R + A + T RL L A + GL+++G+ Sbjct: 535 SQTFNQFYD------RCPILNAEEPQRT-SRLLLCDLTARTLKLGLSLLGI 578 >gi|311273964|ref|XP_003134121.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic [Sus scrofa] Length = 660 Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 145/598 (24%), Positives = 254/598 (42%), Gaps = 103/598 (17%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S+ L ++P IAE I + + ++ V IAG GFIN++L S+ Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKNLPDNEYIEKVEIAGPGFINIHLKKSF 170 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + L++++V+G++ IG KV ++F S N MHVGH R ++G++++ L F+ Sbjct: 171 VSQQLTNLLVNGVQLP--AIGANKKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFA 228 Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198 GY+V R ++ D G Q L L F++ + ++ + + + Sbjct: 229 GYDVLRINHVGDWGTQFGMLIAHLQDKFPDYLRVSPPIGDLQAFYKESKKRFDTEEEFKK 288 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y V L L K L K ++ D S Q KI +AL+I + Sbjct: 289 RAYQCVVL------LQSKNPDIL------KAWKLICDVSRQEFSKI----YEALDIS--L 330 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + F++ + DI+ +G+V + D D ++++F + G Sbjct: 331 IERGESFYQ---DRMNDIVKEFEDRGFV--------------QVD-DGRKIVF---VPGC 369 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVA------ 371 V ++KSDG YTY +DLA K + +E D +IYV+ S S + + + A Sbjct: 370 PVPLTIVKSDGGYTYDTSDLATIKQRLFEEKADMIIYVVDSGQSLHFQAVFGAAQMMGWY 429 Query: 372 -------------AAVSEKKAQINVLLCELVR---LYRDGMPIKMSK---RAGDFI---- 408 + E K + E VR L +G+ M K + D + Sbjct: 430 DPEVTRVSHAGFGVVLGEDKKKFKTRSGETVRLIDLLEEGLKRSMDKLKEKERDKVLTAE 489 Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 L+ V +++ L F F K+ + + N Y+ YA+ R RSI R A Sbjct: 490 ELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA 548 Query: 469 KDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 ++D ++ + + D E +L + +P V++ + L Y+Y+ Sbjct: 549 -----NIDEEMLQKAARETKIILDHEKEWKLGRCILRFPEVLQKILDDLFLHTLCDYIYE 603 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA+ F + + R K+ M RL L AVA+++ G +I+G++ M Sbjct: 604 LATTFTEFYDSCYCVEKDRQT-GEVLKVNMWRLLLCKAVAAVMAKGFDILGIKPVQRM 660 >gi|291571146|dbj|BAI93418.1| arginyl-tRNA synthetase [Arthrospira platensis NIES-39] Length = 585 Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 152/595 (25%), Positives = 250/595 (42%), Gaps = 101/595 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AM L++ L +P IA I+ ++ID IAG GFINL L YL L Sbjct: 40 GDYQCNVAMSLTKKLKSNPRQIAGTIIEHLQIDDICSPPEIAGPGFINLRLKSEYLETQL 99 Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 ++ + GI R+ KV ++F S N MHVGH R ++GD +A ++ F G+ Sbjct: 100 NAKLTDPRLGIAPNRD----PQKVIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFEGH 155 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELAD 215 +V R ++ D G Q L + +Y AL D DL E Y A Sbjct: 156 QVLRLNHVGDWGTQFGMLISYLQEKYPSALTTADVLDIGDLVEFYRQ-----------AK 204 Query: 216 KYSSELLNFPEEKWLPIVKDYS--------VQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 K E F E +V+ S + + + R + + + + DI ++E R Sbjct: 205 KRFDEDEEFKEASREQVVRLQSGAEDSRRAWELLCEQSRREFQQIYDRLDIKLTE----R 260 Query: 268 GDP--SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ +P + +++ +L G + E KC L + GD + + Sbjct: 261 GESFYNPMLAEVVADLEASGLLVE--------DQGAKCVF----LEGFTNKEGDPLPLIV 308 Query: 325 LKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAV--------- 374 KS+G Y Y DLA + + G +IYV + + + ++ VA V Sbjct: 309 QKSNGGYNYATTDLAAVRHRINTEGATRLIYVTDAGQANHFAQVWQVARRVGWIPDGVDV 368 Query: 375 -------------------SEKKAQINVLLCELVRLYRDGMPIKMSK--RAGDFITLRHV 413 S + ++ LL E V+ ++ + ++ + RA + HV Sbjct: 369 VHVPFGLVKGEDGKKLKTRSGETVRLRDLLDEAVKRAQEDLETRLQQEGRAESPEFVHHV 428 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 + VG D+V++ L + + F F K+ + N Y+ YAY R + I R+ Sbjct: 429 AEVVGIDAVKYADLSQNRTSDYIFSFDKML-SLQGNTAPYMLYAYVRIQGISRKGS---- 483 Query: 474 DLDFD-LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE--PYKLAFYLYDLAS 530 +DF+ + R I + D SEL L HL + VI+ +AQE P +L YL++L+ Sbjct: 484 -IDFEQVGDRASIHLQ---DPSELTLAKHLLQLHEVID--AVAQELLPNRLCQYLFELSQ 537 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ + P L+ + + RL L H A + GL+++G+ + M Sbjct: 538 KFNQFYDRC---PVLKADECDRSS----RLALCHLTAETLRLGLSLLGISVLDRM 585 >gi|302189057|ref|ZP_07265730.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642] Length = 578 Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 139/602 (23%), Positives = 248/602 (41%), Gaps = 101/602 (16%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE ++A + D V V IAG GF+N Sbjct: 30 IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + + ++ G +V ++ + N MHVGH R ++GD +A Sbjct: 90 FQN-TAALAARLDAALADAHLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ F G V R+ ++ D G Q L + + + A + SDL E +Y Sbjct: 149 NVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263 A + E F E +VK + A + K +++ H ++ ++ Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLALWTRFKDISLSHCQETYERLNVKLTPA 255 Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 D G+ + + +++++L G + E S Q ++ FR+ DD Sbjct: 256 DVM-GESAYNDDLANVVNDLKATGLLVE-------SNGAQCVFLEE----FRT---ADDT 300 Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374 P++ K+ G Y Y DLA ++ K + D ++Y + + + +++ VA A Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKA-DRVLYFVDQRQALHFQQVFEVARRAGF 359 Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410 Q+ + + RDG +K+ +RA + L Sbjct: 360 VHDGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEAEL 419 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKL-- 476 Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 FD ++ PQE E L LA++ + N P+ L YLYD Sbjct: 477 ---GTPFDASKGQIVLEAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYD 526 Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 LA +F + + G ENP + RL+L + GL+++G+E+ Sbjct: 527 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 576 Query: 584 EM 585 M Sbjct: 577 RM 578 >gi|290890411|ref|ZP_06553486.1| hypothetical protein AWRIB429_0876 [Oenococcus oeni AWRIB429] gi|290479807|gb|EFD88456.1| hypothetical protein AWRIB429_0876 [Oenococcus oeni AWRIB429] Length = 566 Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 138/602 (22%), Positives = 259/602 (43%), Gaps = 101/602 (16%) Query: 29 LDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG- 85 LD++ ++E+P+D G + L+ P IA +KI ++D A Sbjct: 21 LDKLEKLVEKPKDLNRGDYAF-PTFSLAAKFHEAPQKIA------LKIADEIDRTNFANV 73 Query: 86 ---KGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 ++N ++ + ++L I+++ ++GRN G G K+ I+ S N PM +GH Sbjct: 74 KAVGPYVNFFIQRVEFTNQLLKEILLND-DFGRNNQGAGKKIVIDMSSPNIAKPMSMGHL 132 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN-TLALSVFWRYQQALYNNDSDLPEGY 200 R V+G+ ++ + +GY+ + ++ D G Q +A W + + N P Sbjct: 133 RSTVIGEAISKIAKANGYQTIKINFLGDWGTQFGLMIAAYKLWGDDKLINKN----PVDE 188 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM----------MKIIRDDLK 250 +Y+K + DK L W ++D +A+ +K ++ Sbjct: 189 LVKLYVKINKESETDKS----LKDSGRAWFKKLEDGDPEAVKLWNWFKSVSLKEFQEVYD 244 Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310 L + D E F+ P+ + LA +G + E S+ + D+ Sbjct: 245 RLGVSFDSMNGEA-FYNDKMEPV---VKMLASKGLLTE-------SQGAEIVDLP----- 288 Query: 311 FRSTMVGDDVDRPLLK-SDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLE 368 + + D+ ++K SDG+ Y DLA +++ F +YV+G++ + +++ Sbjct: 289 --NLLPKDNYPIAMIKRSDGATQYITRDLASAIYRHDAYDFAKSLYVVGAEQKDHFDQMK 346 Query: 369 AV-----------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405 A+ +S +K I V L +++ R ++S++ Sbjct: 347 AILKLAGDDWADDIEHIGFGMITMNGKKMSTRKGNI-VPLVDVLDTARQLAAEQISEKNP 405 Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSI 464 HV +EVG+ +V F L + + +DF+ K+ + + P YVQY +AR SI Sbjct: 406 GLENADHVAEEVGAGAVVFNDLQKDRNLSIDFNLEKIVQFEGDTGP--YVQYTHARAMSI 463 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 R++ + ++ F D ++ L+ YP +I+ A +EP +A Sbjct: 464 LRKSGQ-----------QAILNTGVTFVDEEAWPIVSRLSAYPEMIKRAWQLREPSIVAK 512 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 YL LA F+ +++H + + NN K+ RL LV V S++ SGLN++GV +PN Sbjct: 513 YLLSLARDFNSYYAHTK-------ILVNNEKM-QSRLSLVQGVCSVLKSGLNLLGVSAPN 564 Query: 584 EM 585 +M Sbjct: 565 QM 566 >gi|322378000|ref|ZP_08052487.1| arginine--tRNA ligase [Streptococcus sp. M334] gi|321280982|gb|EFX57995.1| arginine--tRNA ligase [Streptococcus sp. M334] Length = 563 Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 141/595 (23%), Positives = 248/595 (41%), Gaps = 99/595 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G ++ A + + AEL KI+ +A ++N + Sbjct: 26 LLETPKNSEMGDIAFPAFSLAKVERKAPQMIAAELAE---KINSQAFEKIVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + ++L +++ Y IGK V I+ S N P +GH R V+GD+L+ Sbjct: 83 LDKSAISAQVLQAVITQKEHYADQTIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + GY+ + ++ D G Q L ++ W ++A+ + D LK Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194 Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267 + A+ + L+ +W ++ D A+ + RD+ L N ++ E D + Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELQVEFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + ++D L+ +G + E S+ Q ++++ ++ P Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLVE-------SEGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L KSDG+ Y DLA Y K +Y+ F IYV+G + S + K+L+AV + + Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 ++ + ++G K+S R G+ I L V E Sbjct: 355 D-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAVSRAQAQIEAKNPELENKDQVA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +++F L + DFD V + + P YVQYAYAR +SI R+A Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD---- 465 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 F S D ++I + ++PR+I A EP +A + LA F+ Sbjct: 466 ------FKPETAGNYSLNDAESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQAFN 519 Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R E+P RL L +A A ++ L ++GVE+P +M Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563 >gi|94993337|ref|YP_601436.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS2096] gi|123257687|sp|Q1J9B9|SYR_STRPB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|94546845|gb|ABF36892.1| Arginyl-tRNA synthetase [Streptococcus pyogenes MGAS2096] Length = 563 Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 138/590 (23%), Positives = 254/590 (43%), Gaps = 89/590 (15%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G L+ A L++ L P IA + +I + + V G +IN + Sbjct: 26 LLETPKNSDMGDLAF-PAFSLAKVLRKAPQMIASELAEQID-ESQFEKVVAVGP-YINFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + + ++L ++ +G +Y + G+G V I+ S N P +GH R V+GD+LA Sbjct: 83 LDKAKISSQVLEQVITAGSDYAQQDEGQGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + A GY+ + ++ D G Q L ++ W + A+ + D Y + + Sbjct: 143 HIFAKMGYKPVKINHLGDWGKQFGMLIVAYKKWGDEAAVQAHPIDELLKLYVRINAEAET 202 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 D+ + E W ++D +A + + RD+ L N +D D + Sbjct: 203 DPTVDEEARE--------WFRKLEDGDKEATELWQWFRDESLLEFNRLYDQLHVTFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + +++D L + + E SK Q ++++ ++ P Sbjct: 255 GEAFYNDKMDEVLDLLEAKNLLVE-------SKGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370 L KSDG+ Y DLA Y K Y+ F +YV+G++ + + K+L+AV Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKSVYVVGNEQAAHFKQLKAVLKEMGYDWS 354 Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 A +S +K + +LL V + ++ + + V Sbjct: 355 DDMTHVAFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKEAVAHA 413 Query: 417 VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 VG +++F L DFD V + + P YVQYA+AR +SI R+A Sbjct: 414 VGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAD------ 465 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 F + S D ++I + ++PR+I+ + EP +A + +LA F+ + Sbjct: 466 ----FTPSATTTYSLADAESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQSFNKY 521 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++H R + N+ + RL L +A A+++ L ++ V++PNEM Sbjct: 522 YAH------TRILDDNSERDN--RLALCYATATVLKEALRLLSVDAPNEM 563 >gi|50121444|ref|YP_050611.1| arginyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043] gi|81644856|sp|Q6D474|SYR_ERWCT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|49611970|emb|CAG75419.1| arginyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043] Length = 576 Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 137/597 (22%), Positives = 241/597 (40%), Gaps = 111/597 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE +V + ++ + IAG GFIN++L ++ + Sbjct: 37 GDYQANGVMAVAKKLGMPPRQLAEKVVQLLALEGIAEKTEIAGPGFINIFLDKQWVASQV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + ++ + G + T V I++ + N MHVGH R ++GD A + F G+ + Sbjct: 97 EN-ALNAPKLGLTPVEPQTIV-IDYSAPNVAKEMHVGHLRSTIIGDAAARTLEFLGHNII 154 Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204 R ++ D G Q L L F+R + Y+ D+D E G Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMQNESANEMDLSDLEAFYREAKKHYDEDADFAE-RARGY 213 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 +K G D+Y ++ W +V Q + R L + D+ + E Sbjct: 214 VVKLQG---GDEYCRQM-------WRKLVDITMTQNQINYER--LNVTLTKQDV-MGESL 260 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 ++ S + +I+ +L +G E S+ +D + G+ + + Sbjct: 261 YN----SMLPNIVADLKAKGLAVE-------SEGATVVFLDEYK-----NKEGEPMGVII 304 Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSE 376 K DG Y Y D+A K +YE D ++Y + S + V++ V +VS Sbjct: 305 QKKDGGYLYTTTDIACAKYRYETLNADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVSL 364 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN----- 431 + ++L +DG P K RAG I L ++DE +++ ++ KN Sbjct: 365 EHHMFGMMLG------KDGKPFKT--RAGGTIKLSELLDEAYGRALK--LIAEKNPQMES 414 Query: 432 ------SELLDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRSIFRQA 468 ++++ K + SK N Y+QYAY R SIF++A Sbjct: 415 DELAALAKVVSIGAIKYADLSKSRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASIFKRA 474 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 + D + + D E L L ++ I + P+ + YLYDL Sbjct: 475 -----GIQEDTLTQPITLN----DEREFALATRLLQFEETITSVAREGTPHVMCSYLYDL 525 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A +F G + H + A N + RL+L A + GL+ +G+E+ ++M Sbjct: 526 AGLFSGFYEH------CPILNAENDDVRQSRLRLALLTAKTLKQGLDTLGIETVDKM 576 >gi|225869424|ref|YP_002745372.1| arginyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus] gi|259511657|sp|C0MGC8|SYR_STRS7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|225702700|emb|CAX00816.1| arginyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus] Length = 563 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 146/604 (24%), Positives = 252/604 (41%), Gaps = 117/604 (19%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G L+ A L++ L P IA + RI + V G ++N + Sbjct: 26 LLETPKNSDMGDLAF-PAFSLAKALRKAPQAIASDLAERIDAS-QFEKVAAVGP-YVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + + ++L+ ++ G +Y + G+G + I+ S N P +GH R V+GD+LA Sbjct: 83 LDKASISAQVLTQVIADGADYAQQDEGQGRHIAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + A GY+ + ++ D G Q L ++ W + A+ + D Y + + Sbjct: 143 HIFAKMGYKPVKINHLGDWGKQFGMLIVAYKKWGNEAAVQAHPIDELLKLYVRINAEAET 202 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHRGD 269 D+ + E EE D + + RD+ L N +D D + G+ Sbjct: 203 DPSLDEEAREWFRRLEEG------DQEATELWQWFRDESLIEFNRLYDQLGVSFDSYNGE 256 Query: 270 P---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL- 325 + ++++ L +G + E SK + ++++ ++ P L Sbjct: 257 AFYNDKMDEVLELLEDKGLLVE-------SKGAKVVNLEKY-----------GIEHPALI 298 Query: 326 -KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381 KSDG+ Y DLA Y K Y+ F +YV+G++ + + K+L+AV Sbjct: 299 KKSDGATLYITRDLAAALYRKRTYD--FAKSVYVVGNEQAAHFKQLKAV----------- 345 Query: 382 NVLLCELVRLYRDGMP-----------IKMSKRAGDFITLRHVVDE-------------- 416 L E+ + D M K+S R G+ I L V E Sbjct: 346 ---LKEMGYDWSDDMTHVAFGLVTKGGAKLSTRKGNVILLEPTVAEAISRAANQIEAKNP 402 Query: 417 -----------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSI 464 VG +++F L DFD V + + P YVQYA+AR +SI Sbjct: 403 KLANKEAVAHAVGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGP--YVQYAHARIQSI 460 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R+A F V S D ++I + ++PR+I+ A EP +A + Sbjct: 461 LRKAS----------FTPAVDTSYSLNDPESWEIIKLIQDFPRIIKRAFDNFEPSIMAKF 510 Query: 525 LYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 LA F+ +++H R ++P + +NR L L +A A ++ L ++GVE+ Sbjct: 511 AIHLAQSFNKYYAHTRILEDDP-----ERDNR------LALCYATAIVLKEALRLLGVEA 559 Query: 582 PNEM 585 PNEM Sbjct: 560 PNEM 563 >gi|157963591|ref|YP_001503625.1| arginyl-tRNA synthetase [Shewanella pealeana ATCC 700345] gi|189083549|sp|A8H953|SYR_SHEPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|157848591|gb|ABV89090.1| arginyl-tRNA synthetase [Shewanella pealeana ATCC 700345] Length = 581 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 144/606 (23%), Positives = 238/606 (39%), Gaps = 104/606 (17%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 RI ++R +D +HG +TN AM+L++ G +P +A+L++ + V+ V IAG GFIN Sbjct: 29 RIQVDRTKDKSHGDFATNLAMMLTKAAGKNPRELAQLLIDNLPESSHVEKVEIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 ++ + L L + + S GIE + V +++ S N MHVGH R ++G Sbjct: 89 FFIDDNALANQLMAALNSDTLGIE-----LPASQTVVVDYSSPNLAKEMHVGHLRSTIIG 143 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA--------------------LSVFWRYQQ 187 D++ + F G++V R+ ++ D G Q L L F+R + Sbjct: 144 DSVVRALEFMGHKVIRQNHVGDWGTQFGMLLAYMEELRAANGEQAKMELSDLETFYRAAK 203 Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247 ++ + V G E +K E + + + V +R Sbjct: 204 VRFDESEEFATRARKLVVALQSGDEYCNKLWREFNDISLSHCHELYERLGVSLTRADVRG 263 Query: 248 D-------------------LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288 + L N +F E G+P P +I A GY+Y Sbjct: 264 ESAYNSDLAQVVADLDSQGLLSESNGAKVVFQDEFKNKEGEPLP---VIIQKADGGYLY- 319 Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD------GSYTYFAADLAYFK 342 D + +RS ++ + DR L D + A A F Sbjct: 320 -------------ATSDLAAMRYRSNVL--NADRALYFVDLRQALHFQQVFKLAKTAKF- 363 Query: 343 CKYERGFDNMIY--VMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIK 399 + E F++M + + G D + R V + K+A I L +LVR M Sbjct: 364 VREEMSFEHMGFGTMNGEDGRPFKTRSGGVVKLIDLLKEADIRAL--DLVRSKNPDM--- 418 Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459 D L + VG SV++ L + + F F ++ + N Y+ YAY Sbjct: 419 ------DEAELAEIARVVGIASVKYADLSKNRASDYIFSFEQML-SFEGNTAPYLLYAYT 471 Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 R IF++A+D+ DL +I + + E L LA++ V+ +P+ Sbjct: 472 RVAGIFKRAQDV------DLSDAKIILEHEK----EKDLGTKLAQFGEVMARMVSKGQPH 521 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 L YL++LA F + P L A +L RL L A + GLN++G+ Sbjct: 522 ALCGYLFELAGAFSSFY---EACPVL---AAETEELKKSRLLLSQLTAKTLKQGLNLLGL 575 Query: 580 ESPNEM 585 E+ M Sbjct: 576 ETLERM 581 >gi|284051070|ref|ZP_06381280.1| arginyl-tRNA synthetase [Arthrospira platensis str. Paraca] Length = 585 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 152/595 (25%), Positives = 249/595 (41%), Gaps = 101/595 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AM L++ L +P IA I+ ++ID IAG GFINL L YL L Sbjct: 40 GDYQCNVAMSLTKKLKSNPRQIAGTIIEHLQIDDICSPPEIAGPGFINLRLKSEYLETQL 99 Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 ++ + GI R+ KV ++F S N MHVGH R ++GD +A ++ F G+ Sbjct: 100 NAKLTDPRLGIAPNRD----PQKVIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFEGH 155 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELAD 215 +V R ++ D G Q L + +Y AL D DL E Y A Sbjct: 156 QVLRLNHVGDWGTQFGMLISYLQEKYPSALTTADVLDIGDLVEFYRQ-----------AK 204 Query: 216 KYSSELLNFPEEKWLPIVKDYS--------VQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 K E F E +V+ S + + R + + + + DI ++E R Sbjct: 205 KRFDEDEEFKEASREQVVRLQSGSEDSRRAWELLCDQSRREFQQIYDRLDIKLTE----R 260 Query: 268 GDP--SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ +P + +++ +L G + E KC L + GD + + Sbjct: 261 GESFYNPMLAEVVADLEASGLLVE--------DQGAKCVF----LEGFTNKEGDPLPLIV 308 Query: 325 LKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAV--------- 374 KS+G Y Y DLA + + G +IYV + + + ++ VA V Sbjct: 309 QKSNGGYNYATTDLAAVRHRINTEGATRLIYVTDAGQANHFAQVWQVARRVGWIPDGVDV 368 Query: 375 -------------------SEKKAQINVLLCELVRLYRDGMPIKMSK--RAGDFITLRHV 413 S + ++ LL E V+ ++ + ++ + RA + HV Sbjct: 369 VHVPFGLVKGEDGKKLKTRSGETVRLRDLLDEAVKRAQEDLETRLQQEGRAESPEFVHHV 428 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 + VG D+V++ L + + F F K+ + N Y+ YAY R + I R+ Sbjct: 429 AEVVGIDAVKYADLSQNRTSDYIFSFDKMLS-LQGNTAPYMLYAYVRIQGISRKGS---- 483 Query: 474 DLDFD-LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE--PYKLAFYLYDLAS 530 +DF+ + R I + D SEL L HL + VI+ +AQE P +L YL++L+ Sbjct: 484 -IDFEQVGDRASIHLQ---DPSELTLAKHLLQLHEVID--AVAQELLPNRLCQYLFELSQ 537 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ + P L+ + + RL L H A + GL+++G+ + M Sbjct: 538 KFNQFYDRC---PVLKADECDRSS----RLALCHLTAETLRLGLSLLGISVLDRM 585 >gi|304396251|ref|ZP_07378133.1| arginyl-tRNA synthetase [Pantoea sp. aB] gi|304356620|gb|EFM20985.1| arginyl-tRNA synthetase [Pantoea sp. aB] Length = 594 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 139/596 (23%), Positives = 235/596 (39%), Gaps = 109/596 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL---- 98 G N M +++ LG P +AE ++ + + V IAG GFIN++L ++L Sbjct: 55 GDYQANGIMAVAKKLGQAPRQLAEAVIQHLDLTGIASKVEIAGPGFINIFLDHNWLATHA 114 Query: 99 RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158 R+ LS + G++ + + + +++ + N MHVGH R ++GD + F G Sbjct: 115 RQALS-LPRLGVQ-----LAEPQTIVVDYSAPNVAKEMHVGHVRSTIIGDAAVRTLEFLG 168 Query: 159 YEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGY 200 + V R ++ D G Q L L F+R + Y+ D + E Sbjct: 169 HNVIRANHVGDWGTQFGMLIAFLEKQQNEDHAEMALADLEGFYREAKRTYDEDPEFAERA 228 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 V G E + +L++ + I +V + R+D+ ++ +D+ Sbjct: 229 RSYVVKLQGGDEYCRQMWKKLVDITMSQNQKIYDRMNV----TLTRNDVMGESLYNDM-- 282 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 + I+ +L ++G E S+ +D Q G+ + Sbjct: 283 ------------LPGIVSDLKQKGLAVE-------SEGATVVFLDEFQ-----NKEGEPM 318 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI--YVMGSDHSGYVKRLEAV--AAAVSE 376 + K DG Y Y D+A K +YE N + Y+ H V+ V A V E Sbjct: 319 GVIIQKKDGGYLYTTTDIACAKYRYETLKANRVLYYIDSRQHQHLVQAWTIVRKAGYVPE 378 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416 + + L +DG P K R+G I L ++DE Sbjct: 379 SVPLEHHAFGMM--LGKDGRPFKT--RSGGTIKLSDLLDEAYQRAYSLVREKNPEMSEAE 434 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 VG +V++ L + + FD+ + + N Y+QYAY R S+FR+A Sbjct: 435 VKTLAEVVGISAVKYADLSKSRTTDYIFDWDNMLA-FEGNTAPYMQYAYTRVLSVFRKAG 493 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 LD ++ VI +E E QL L ++ VI P+ + YLYDLA Sbjct: 494 INADSLDAEI----VISEERE-----AQLATRLLQFEEVITQVARDGTPHVMCAYLYDLA 544 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +F G + H + A + + RLQL A + GL+ +G+++ M Sbjct: 545 GLFSGFYEH------CPILSAESDATRLSRLQLAALTAKTLKQGLDTLGIDTVERM 594 >gi|237798091|ref|ZP_04586552.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020943|gb|EGI01000.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 578 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 138/602 (22%), Positives = 250/602 (41%), Gaps = 101/602 (16%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE ++A + D V V IAG GF+N Sbjct: 30 IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + + + ++ G +V ++ + N MHVGH R ++GD +A Sbjct: 90 FQN-TAALALRLDAALADANLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ F G V R+ ++ D G Q L + + + A + SDL E +Y Sbjct: 149 NVLEFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263 A + E F E +VK + A + + K +++ H ++ ++ Sbjct: 196 RAAKQRFDESAEFAERARGLVVKLQAGDAECLTLWERFKDISLSHCQQTYERLNVKLTPA 255 Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 D G+ + + +++++L G + E S Q ++ FR+ DD Sbjct: 256 DVM-GESAYNDDLANVVNDLKATGLLVE-------SNGAQCVFLEE----FRT---ADDT 300 Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374 P++ K+ G Y Y DLA ++ K + D ++Y + + + +++ VA A Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKA-DRVLYFVDQRQALHFQQVFEVARRAGF 359 Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410 Q+ + + RDG +K+ +RA + L Sbjct: 360 VHNGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAETEL 419 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKL-- 476 Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 FD ++ PQE E L LA++ + N P+ L YLYD Sbjct: 477 ---GTPFDASKGQIVLEAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYD 526 Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 LA +F + + G E+P + RL+L + GL+++G+E+ Sbjct: 527 LAGLFSSFYENCPILGAESPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 576 Query: 584 EM 585 M Sbjct: 577 RM 578 >gi|81300386|ref|YP_400594.1| arginyl-tRNA synthetase [Synechococcus elongatus PCC 7942] gi|81169267|gb|ABB57607.1| arginyl-tRNA synthetase [Synechococcus elongatus PCC 7942] Length = 590 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 153/590 (25%), Positives = 234/590 (39%), Gaps = 104/590 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G +N AM L++ LG P IAE +V + + + IAG GFIN L PSYL L Sbjct: 46 GDYQSNVAMSLAKQLGQPPRAIAETLVQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQL 105 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + G + +V ++F S N MHVGH R ++GD++A ++ F G+EV Sbjct: 106 QQLQTDE-RLGIQPVSPPQRVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVL 164 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPG--------VYLKHVG 210 R ++ D G Q L + +Y QAL D SDL Y + + Sbjct: 165 RLNHVGDWGTQFGMLIAFLQEQYPQALSQPDALDISDLVAFYKQAKARFDEDPSFQETAR 224 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 + + D S E + W Q + R + + + + DI + E +P Sbjct: 225 QRVVDLQSGEATA--RQAW---------QLLCDQSRREFQKIYDRLDIQLEERGESFYNP 273 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSD 328 + I+++L R G + E D + + + PL+ KSD Sbjct: 274 Y-LPAIVEDLRRLGLLVE--------------DQGAQCVFLEGFQNKEGQPLPLIVQKSD 318 Query: 329 GSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINV 383 G Y Y DLA +Y G D +IYV S + + ++ VA A AQI Sbjct: 319 GGYNYATTDLAAL--RYRLGQDQAQRIIYVTDSGQANHFAQVFQVAQRAGWLPAAAQIEH 376 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416 + LV+ DG K+ RAGD + LR ++DE Sbjct: 377 VPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVDRARTDLTTRIAAEERSETPEFIEA 433 Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 VG +V++ L + + F F K+ + N Y+ YAY R + I R+ F Sbjct: 434 VAQAVGLGAVKYADLSQNRNSNYIFSFDKMLA-LQGNTAPYLLYAYVRIQGIARKGGIDF 492 Query: 473 PDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 LD P + P E LQL L E R + P +L YL++L+ Sbjct: 493 AQLD----PVAAVLTEPTERSLAKQVLQLGEVLDEVARDL-------LPNRLCSYLFELS 541 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 F+ + R + A + T RL L A + GL+++G+ Sbjct: 542 QTFNQFYD------RCPILNAEEPQRT-SRLLLCDLTARTLKLGLSLLGI 584 >gi|292488556|ref|YP_003531440.1| arginyl-tRNA synthetase [Erwinia amylovora CFBP1430] gi|292899728|ref|YP_003539097.1| arginyl-tRNA synthetase [Erwinia amylovora ATCC 49946] gi|291199576|emb|CBJ46693.1| arginyl-tRNA synthetase [Erwinia amylovora ATCC 49946] gi|291553987|emb|CBA21032.1| Arginyl-tRNA synthetase [Erwinia amylovora CFBP1430] gi|312172701|emb|CBX80957.1| Arginyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158] Length = 576 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 136/596 (22%), Positives = 234/596 (39%), Gaps = 109/596 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ ++ ++ V IAG GFIN++L+P +L + Sbjct: 37 GDYQANGIMAVAKKLGMPPRQLAEKVLEQLDLNGIAHKVDIAGPGFINIFLAPQWLSAQI 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 S V++ + G + + T V I++ + N MHVGH R ++GD A +AF G++V Sbjct: 97 DS-VLTAPKLGVSPVEPETVV-IDYSAPNVAKEMHVGHVRSTIIGDAAARTLAFLGHKVI 154 Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204 R ++ D G Q L L F+R + Y+ D V Sbjct: 155 RANHVGDWGTQFGMLIAYLEKQQNEHHEAIALADLEAFYREAKRTYDEDPAFAARARGYV 214 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 G K +L++ + I +V + RDD+ ++ +D+ + Sbjct: 215 VKLQSGDRYCRKMWKQLVDITMTQNQLIYDRMNV----TLTRDDVMGESLYNDMLPA--- 267 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 I+ +L +G E S+ +D + G+ + + Sbjct: 268 -----------IVSDLKAKGLAVE-------SEGATVVFLDEYK-----NKEGEPMGVIV 304 Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSE 376 K DG Y Y D+A K +YE D ++Y + S + V++ V ++ Sbjct: 305 QKKDGGYLYTTTDIACAKYRYETLKADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSIPL 364 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416 + ++L +DG P K RAG I L ++DE Sbjct: 365 EHHMFGMMLG------KDGKPFK--TRAGGTIKLSDLLDEAVDRAAKLVAVKNPDMPADE 416 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 VG +V++ L + + FD+ + + N Y+QYAY R S+FR+A Sbjct: 417 LAALANIVGIGAVKYADLSKSRTTDYIFDWDNMLA-FEGNTAPYMQYAYTRVLSVFRKA- 474 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 + V + E L V L ++ I P+ + YLYDLA Sbjct: 475 --------GIDAEAVGGTTRIIEDREAALAVRLLQFDETITQVARDGMPHVMCAYLYDLA 526 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +F G + H + A + RL+L A + GL+ +G+E+ M Sbjct: 527 GLFSGFYEH------CPILNAEDDATRQSRLRLALLTAKTLKQGLDTLGIETVERM 576 >gi|225871422|ref|YP_002747369.1| arginyl-tRNA synthetase [Streptococcus equi subsp. equi 4047] gi|254782983|sp|C0MAS8|SYR_STRE4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|225700826|emb|CAW95535.1| arginyl-tRNA synthetase [Streptococcus equi subsp. equi 4047] Length = 563 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 145/604 (24%), Positives = 252/604 (41%), Gaps = 117/604 (19%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G L+ A L++ L P IA + RI + V G ++N + Sbjct: 26 LLETPKNSDMGDLAF-PAFSLAKALRKAPQAIASDLAERIDAS-QFEKVAAVGP-YVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + + ++L+ ++ G +Y + G+G + I+ S N P +GH R V+GD+LA Sbjct: 83 LDKASISAQVLTQVIADGADYAQQDEGQGRHIAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + A GY+ + ++ D G Q L ++ W + A+ + D Y + + Sbjct: 143 HIFAKMGYKPVKINHLGDWGKQFGMLIVAYKKWGNEAAVQAHPIDELLKLYVRINAEAET 202 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHRGD 269 D+ + E EE +D + + RD+ L N +D D + G+ Sbjct: 203 DPSLDEEAREWFRRLEE------RDQEATELWQWFRDESLIEFNRLYDQLGVSFDSYNGE 256 Query: 270 P---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL- 325 + ++++ L +G + E SK + ++++ ++ P L Sbjct: 257 AFYNDKMDEVLELLEDKGLLVE-------SKGAKVVNLEKY-----------GIEHPALI 298 Query: 326 -KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381 KSDG+ Y DLA Y K Y+ F +YV+G++ + + K+L+AV Sbjct: 299 KKSDGATLYITRDLAAALYRKRTYD--FAKSVYVVGNEQAAHFKQLKAV----------- 345 Query: 382 NVLLCELVRLYRDGMP-----------IKMSKRAGDFITLRHVVDE-------------- 416 L E+ + D M K+S R G+ I L V E Sbjct: 346 ---LKEMGYDWSDDMTHVAFGLVTKGGAKLSTRKGNVILLEPTVAEAISRAANQIEAKNP 402 Query: 417 -----------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSI 464 VG +++F L DFD V + + P YVQYA+AR +SI Sbjct: 403 KLANKEAVAHAVGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGP--YVQYAHARIQSI 460 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R+A F S D ++I + ++PR+I+ A EP +A + Sbjct: 461 LRKAS----------FTPATDTSYSLNDPESWEIIKLIQDFPRIIKRAFDNFEPSIMAKF 510 Query: 525 LYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 LA F+ +++H R ++P + +N RL L +A A ++ L ++GVE+ Sbjct: 511 AIHLAQSFNKYYAHTRILEDDP-----ERDN------RLALCYATAIVLKEALRLLGVEA 559 Query: 582 PNEM 585 PNEM Sbjct: 560 PNEM 563 >gi|58337861|ref|YP_194446.1| arginyl-tRNA synthetase [Lactobacillus acidophilus NCFM] gi|227904511|ref|ZP_04022316.1| arginyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796] gi|75357337|sp|Q5FIQ9|SYR_LACAC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|58255178|gb|AAV43415.1| arginyl-tRNA synthetase [Lactobacillus acidophilus NCFM] gi|227867720|gb|EEJ75141.1| arginyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796] Length = 561 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 140/600 (23%), Positives = 258/600 (43%), Gaps = 110/600 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IERP++ G + A IL++ + +P IA+ I + D + ++ G ++N Sbjct: 25 LIERPKNAKMGDYAF-PAFILAKTMHKNPAIIAKDIAENLNSD-NFANIQAVGP-YVNFA 81 Query: 93 LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + L L ++ YG +G+G V I+ S N PM +GH R V+G+++A Sbjct: 82 IDHEKLIASTLKDVLAEKEHYGDQKLGEGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 M GY + Y+ D G Q L + Y+ + N+ D+ + ++ +V Sbjct: 141 KTMKKVGYTPIKINYLGDYGTQFGKLIAA----YKH--WGNEEDVKKDPIMSLFHYYV-- 192 Query: 212 ELADKYSSELLNFPE-----EKWLPIVKDYSVQAM----------MKIIRDDLKALNIQH 256 K+ E N PE +W ++D +A+ +K + K L + Sbjct: 193 ----KFHKEAENNPELDNEGREWFKKLEDGDPEAVELWKWFREVSLKDFKRIYKELGVTF 248 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D + E F+ ++ +ID L +G ++E S+ Q DM Sbjct: 249 DSYNGEAFFN----DKMQPVIDELKDKGLLHE-------SRGAQVVDM------------ 285 Query: 317 GDDVDRPLL-KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV---- 370 G+D + ++ KSDG+ Y DLA + + E F M+YV+G++ + + L+ V Sbjct: 286 GEDENPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQAQHFVELKTVLKKM 345 Query: 371 -------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 +S +K + V L +++R + ++ ++ D Sbjct: 346 GYDWADEIHHVPFGLITQGGKKLSTRKGNV-VFLDQVLRDAVNLAKKQIQEKNPDLADQD 404 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQA 468 V +VG +V F L KN L +FDF V+ + P YVQY AR +S+ R+A Sbjct: 405 QVAHDVGVGAVVFHDL--KNDRLDNFDFDLDEVVRFEGDTGP--YVQYTNARAQSVLRKA 460 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSE---LQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 + P E +F+ ++ + LA++PR++ + EP +A + Sbjct: 461 AAMGEK-----------PSEGDFNINDDWAFAVAKDLADFPRIVARSAEKFEPSVIAKFA 509 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 DLA F+ ++++ ++ + +++ RL LV A + ++ L ++GV +P EM Sbjct: 510 LDLAKKFNKYYAN------VKILTKDDQ--IGARLALVQATSIVLTESLRLLGVNAPKEM 561 >gi|77456627|ref|YP_346132.1| arginyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1] gi|109895021|sp|Q3KJB3|SYR_PSEPF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|77380630|gb|ABA72143.1| arginyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1] Length = 578 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 135/572 (23%), Positives = 234/572 (40%), Gaps = 86/572 (15%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE I+A + D +V IAG GFIN Sbjct: 30 IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKIIAALPADENVTKAEIAGPGFINF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + L L + + G G + ++ + N MHVGH R ++GD +A Sbjct: 90 FQNTQALASRLDAALADA-HVGVRKAGPAQRTVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ F G V R+ ++ D G Q L + + + SDL Y Sbjct: 149 RVLEFLGDTVIRQNHVGDWGTQFGMLM--AYLQENPITSDELSDLENFYRAAKQRFDESP 206 Query: 212 ELADKYSSEL--LNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 E AD+ + L + + L + KD S+ KI +L + + + E ++ Sbjct: 207 EFADRARGLVVKLQAGDAECLALWTKFKDISLSHCQKIY--ELLNVKLTMADVMGESAYN 264 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 + +++++L G + E S Q +D F++ G+ + ++K Sbjct: 265 ----DDLINVVNDLKAAGMLVE-------SNGAQCVFLDE----FKNAE-GEPLPVIIVK 308 Query: 327 SDGSYTYFAADLAYFKCKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383 +DG Y Y DLA +Y G D +Y + + + +++ AVA +KA Sbjct: 309 ADGGYLYATTDLA--AVRYRSGKLKADRALYFVDQRQALHFQQVFAVA-----RKAGFVT 361 Query: 384 LLCELVRL--------------YRDGMPIKM-------SKRAGDFIT----------LRH 412 E+ + RDG +K+ +RA + LR Sbjct: 362 HPMEMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLTEAQERAYALVKEKNPTLADDELRS 421 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ + + Sbjct: 422 IAKVVGIGAVKYADLSKHRTSDYSFNFDQML-NLEGNTAPYLLYAYTRVAGVFRKLEKEY 480 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 ++D + PQE + L LA++ V+ N P+ L YLY++A +F Sbjct: 481 SEVDGQIVLE--APQEHD-------LAAKLAQFGEVLNNVAEKGTPHTLCTYLYEVAGLF 531 Query: 533 HGHWSH----GRENP-----RLRFVQANNRKL 555 + E P RLR R L Sbjct: 532 SSFYEKCPILTAETPAQMQSRLRLAALTGRTL 563 >gi|93141321|sp|Q8KPU9|SYR_SYNE7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS Length = 584 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 153/590 (25%), Positives = 234/590 (39%), Gaps = 104/590 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G +N AM L++ LG P IAE +V + + + IAG GFIN L PSYL L Sbjct: 40 GDYQSNVAMSLAKQLGQPPRAIAETLVQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQL 99 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + G + +V ++F S N MHVGH R ++GD++A ++ F G+EV Sbjct: 100 QQLQTDE-RLGIQPVSPPQRVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVL 158 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPG--------VYLKHVG 210 R ++ D G Q L + +Y QAL D SDL Y + + Sbjct: 159 RLNHVGDWGTQFGMLIAFLQEQYPQALSQPDALDISDLVAFYKQAKARFDEDPSFQETAR 218 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 + + D S E + W Q + R + + + + DI + E +P Sbjct: 219 QRVVDLQSGEATA--RQAW---------QLLCDQSRREFQKIYDRLDIQLEERGESFYNP 267 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSD 328 + I+++L R G + E D + + + PL+ KSD Sbjct: 268 Y-LPAIVEDLRRLGLLVE--------------DQGAQCVFLEGFQNKEGQPLPLIVQKSD 312 Query: 329 GSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINV 383 G Y Y DLA +Y G D +IYV S + + ++ VA A AQI Sbjct: 313 GGYNYATTDLAAL--RYRLGQDQAQRIIYVTDSGQANHFAQVFQVAQRAGWLPAAAQIEH 370 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416 + LV+ DG K+ RAGD + LR ++DE Sbjct: 371 VPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVDRARTDLTTRIAAEERSETPEFIEA 427 Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 VG +V++ L + + F F K+ + N Y+ YAY R + I R+ F Sbjct: 428 VAQAVGLGAVKYADLSQNRNSNYIFSFDKMLA-LQGNTAPYLLYAYVRIQGIARKGGIDF 486 Query: 473 PDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 LD P + P E LQL L E R + P +L YL++L+ Sbjct: 487 AQLD----PVAAVLTEPTERSLAKQVLQLGEVLDEVARDL-------LPNRLCSYLFELS 535 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 F+ + R + A + T RL L A + GL+++G+ Sbjct: 536 QTFNQFYD------RCPILNAEEPQRT-SRLLLCDLTARTLKLGLSLLGI 578 >gi|330899266|gb|EGH30685.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 578 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 139/602 (23%), Positives = 247/602 (41%), Gaps = 101/602 (16%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE ++A + D V V IAG GF+N Sbjct: 30 IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + + ++ G +V ++ + N MHVGH R + GD +A Sbjct: 90 FQN-TAALAARLDAALADAHLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTIFGDGVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ F G V R+ ++ D G Q L + + + A + SDL E +Y Sbjct: 149 NVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263 A + E F E +VK + A + K +++ H ++ ++ Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLALWTHFKDISLSHCQETYERLNVKLTPA 255 Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 D G+ + + +++++L G + E S Q ++ FR+ DD Sbjct: 256 DVM-GESAYNDDLANVVNDLKASGLLVE-------SNGAQCVFLEE----FRTA---DDT 300 Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374 P++ K+ G Y Y DLA ++ K + D ++Y + + + +++ VA A Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKA-DRVLYFVDQRQALHFQQVFEVARRAGF 359 Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410 Q+ + + RDG +K+ +RA + L Sbjct: 360 VHDGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEAEL 419 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKLGS 478 Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 FD ++ PQE E L LA++ + N P+ L YLYD Sbjct: 479 A-----FDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYD 526 Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 LA +F + + G ENP + RL+L + GL+++G+E+ Sbjct: 527 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 576 Query: 584 EM 585 M Sbjct: 577 RM 578 >gi|320160730|ref|YP_004173954.1| arginyl-tRNA synthetase [Anaerolinea thermophila UNI-1] gi|319994583|dbj|BAJ63354.1| arginyl-tRNA synthetase [Anaerolinea thermophila UNI-1] Length = 587 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 129/558 (23%), Positives = 244/558 (43%), Gaps = 112/558 (20%) Query: 84 AGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 A KG++NLY S S Y ++++ ++ G E+G+ +V +EF N HVGH R Sbjct: 86 AVKGYLNLYFSSSEYAQRVIDQVLEEGSEFGKG-PSLNQQVMVEFSQPNTHKAFHVGHLR 144 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY-- 200 A++GD+++ ++ F+GY+V R Y D G + + W Y + ++N P G Sbjct: 145 SAILGDSISRILEFAGYDVIRANYPGDIGLHV----IKWLWNYMK--FHNGEKPPAGATT 198 Query: 201 -YPGVYLKHVGKELA----------------DKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + G + L DK E++ EE +++S+Q Sbjct: 199 RWMGDLYAEANRRLEENPELESEVRALYARWDKRDPEIVRLWEE-----TREWSLQGF-- 251 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 R+ + L+I+ DI+ F+ P +++++ L ++G + P+ K D Sbjct: 252 --REMYRTLDIRFDIYY----FNSMVEHPGKEVVEELIQKGIAQD---ERPEGPVIVKLD 302 Query: 304 --MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM---IYVMGS 358 + K+ +R ++ L+SD + Y DLA K K+ + N+ YV+ Sbjct: 303 ELLGLKEEKYRVLVI--------LRSDNTALYATEDLALAKRKFS-DYPNLYRSYYVVDV 353 Query: 359 DHSGYVKRL-EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416 S + +++ + + A E + + ELV L + + M+ R G + L ++ E Sbjct: 354 RQSLHFQQVFKTLELAGYEWANRCQHIPYELVNLPGN---VVMASREGTVVLLEDLIREA 410 Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKEN 449 VG ++++ ML R+N++++ FD+ + + Sbjct: 411 TARALQVVEEKNPELLPEQKQQVAQAVGIGAIKYPMLARENTKIVTFDWQTALDFNGQAA 470 Query: 450 PVFYVQYAYARCRSIFRQAKDI--FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 P Y+QYA+ R SI R+A + ++++ + P +ELQLI ++ +P+ Sbjct: 471 P--YIQYAHVRASSILRKAGGVPLHAEVNYPMMP------------AELQLIDLISRFPK 516 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 ++ A +P +A Y+LA F ++ E P V + RL+LV A Sbjct: 517 EVQRAASELKPLHIANAAYELAKTFSDFYN---ECP----VLTAEEPVRNGRLRLVAATR 569 Query: 568 SIINSGLNIIGVESPNEM 585 I + L ++G+++P M Sbjct: 570 QTIANALGLLGIQAPEVM 587 >gi|296101787|ref|YP_003611933.1| arginyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295056246|gb|ADF60984.1| arginyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 577 Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 136/590 (23%), Positives = 243/590 (41%), Gaps = 96/590 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + + IAG GFIN++L P++L Sbjct: 37 GDYQANGVMAVAKKLGMPPRQLAEQVLTHLDLTGIASKTEIAGPGFINIFLEPAFL---- 92 Query: 103 SSIVVSGIEYGRNLIGKG--TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 +S V + ++ R + + V I++ + N MHVGH R ++GD + F G++ Sbjct: 93 ASHVDAALKSDRLGVAQPEPQTVVIDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHK 152 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 V R ++ D G Q L ++ + QQ N ++ G Y + A K+ E Sbjct: 153 VIRANHVGDWGTQFGML-IAYLEKQQQ---ENAGEMALADLEGFYRE------AKKHYDE 202 Query: 221 LLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPI 273 F E +VK Y ++ K++ DI +S++ ++R + + Sbjct: 203 DEAFAERARSYVVKLQGGDPYFLEMWRKLV-----------DITMSQNQLTYNRLNVTLT 251 Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSDGS 330 RD + + + GI+ K+K + + ++F G+ + + K DG Sbjct: 252 RDDVMGESLYNPMLPGIVADLKAKHL-AVESEGATVVFLDEYKNKEGEPMGVIIQKKDGG 310 Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382 Y Y D+A K +YE D ++Y + S + V++ V V + Sbjct: 311 YLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDCVPLEHHMFG 370 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416 ++L +DG P K RAG + L ++DE Sbjct: 371 MMLG------KDGKPFKT--RAGGTVKLSDLLDEALERARRLVAEKNPDMPAEELEKLAN 422 Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 VG +V++ L + + FD+ + + N Y+QYAY R S+FR+A ++ Sbjct: 423 AVGIGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----NI 476 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 D + + + + E QL L ++ + P+ + YLYDLA +F G Sbjct: 477 DESVLANATV---TITEDREAQLAARLLQFEETLSVVARDGTPHVMCAYLYDLAGLFSGF 533 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + H + A N + RL+L A + GL+ +G+E+ M Sbjct: 534 YEH------CPILSAENESVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|300867420|ref|ZP_07112075.1| Arginyl-tRNA synthetase [Oscillatoria sp. PCC 6506] gi|300334610|emb|CBN57243.1| Arginyl-tRNA synthetase [Oscillatoria sp. PCC 6506] Length = 581 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 135/533 (25%), Positives = 217/533 (40%), Gaps = 74/533 (13%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G NAAM L++ LG P IA I+ + + ++ IAG GFINL L P YL + Sbjct: 36 GDYQCNAAMSLTKKLGKPPRAIASAIIENLDVADLCETPTIAGPGFINLTLKPEYLEGEV 95 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 ++I + G +V I+F S N MHVGH R ++GD LA ++ F G++V Sbjct: 96 NAIA-NNPRLGIAPTKTPQRVAIDFSSPNIAKEMHVGHLRSTIIGDCLARILEFQGHDVL 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSEL 221 R ++ D G Q L + Y +AL D+ DL +L D Y Sbjct: 155 RLNHVGDWGTQFGMLIAYLREVYPEALTTADALDL--------------GDLVDFYRKAK 200 Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NL 280 F E++ V + D +A N+ + E R + I D++D L Sbjct: 201 KRFDEDETFKETARQEVVRLQAGAEDTRRAWNL-----LCEQ--SRREFQVIYDLLDIKL 253 Query: 281 ARQGYVYEGILPPPKSKTTQKC-----DMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTY 333 +G + L P + K D K + + PL+ KSDG + Y Sbjct: 254 TERGESFYNPLLPGVVEDLTKLGLLVEDNGAKCVFIEGFTNKEGEPLPLIVQKSDGGFNY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRL 391 DLA + + E+ G + +IYV S + + + VA + ++ + L Sbjct: 314 ATTDLAALRYRIEKDGANRLIYVTDSGQANHFAQFFQVARKAGWIPDDVEIVHVPFGLVL 373 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDE-------------------------------VGSD 420 DG K R+G+ + LR ++DE +G Sbjct: 374 GEDGK--KSKTRSGETVRLRDLLDEAIVRSRADLEKRLQEEKREETEEFIANVAKVIGLS 431 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +V++ L + + F + K+ + K N Y+ YAY R + I R+ + F +L D Sbjct: 432 AVKYADLSQNRTSNYTFSYDKMLDL-KGNTAPYLLYAYVRVKGIGRKGEINFDNLGAD-- 488 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 VI +E +EL L HL + V+ P ++ YL++L+ F+ Sbjct: 489 -AKVILKED----AELVLAKHLLQLSEVVGAVEGDLLPNRICQYLFELSQKFN 536 >gi|218548565|ref|YP_002382356.1| arginyl-tRNA synthetase [Escherichia fergusonii ATCC 35469] gi|226701420|sp|B7LPH0|SYR_ESCF3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|218356106|emb|CAQ88723.1| arginyl-tRNA synthetase [Escherichia fergusonii ATCC 35469] gi|325496983|gb|EGC94842.1| arginyl-tRNA synthetase [Escherichia fergusonii ECD227] Length = 577 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 144/583 (24%), Positives = 246/583 (42%), Gaps = 82/583 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPTFLAENV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G K T V +++ + N MHVGH R ++GD + F G++V Sbjct: 97 QQALKSD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + W +Q N +DL EG+Y A K+ Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMALADL-EGFYRD----------AKKHY 200 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276 E F E +VK +Q+ + R+ + L DI ++++ + R + + RD Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333 + + + GI+ K+K + + ++F GD + + K DG Y Y Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389 D+A K +YE D ++Y + S ++ + A+ A V E + + + Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422 L +DG P K RAG + L ++DE VG +V Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 ++ L + + FD+ + + N Y+QYAY R S+FR K + + P Sbjct: 430 KYADLSKNRTTDYVFDWDNML-AFEGNTAPYMQYAYTRVLSVFR--KAEIAEEELAAAP- 485 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 VI +E E QL L ++ + P+ + YLYDLA +F + H Sbjct: 486 -VIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSSFYEH---- 536 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 --CPILSAENEEVRNSRLKLALLTAKTLKLGLDTLGIETVERM 577 >gi|123442647|ref|YP_001006624.1| arginyl-tRNA synthetase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166200587|sp|A1JRM9|SYR_YERE8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|122089608|emb|CAL12457.1| arginyl-tRNA synthetase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 576 Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 136/582 (23%), Positives = 246/582 (42%), Gaps = 81/582 (13%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + +D V IAG GFIN++L ++ + Sbjct: 37 GDYQANGVMAIAKKLGMQPRQLAEKVIELLDLDGIASKVEIAGPGFINIFLDRQWVASKV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + + G + T V +++ + N MHVGH R ++GD + F G+ V Sbjct: 97 EE-ALKAPKLGVQPVEPQTIV-VDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGKELADKYSSEL 221 R ++ D G Q L Y + + N N SD+ G+ + + A K E Sbjct: 155 RANHVGDWGTQFGMLI-----AYLEKMQNENASDM------GLSDLELFYQQAKKTYDED 203 Query: 222 LNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHD---IFISEDDFHRGDP--- 270 F + +VK +Y Q K++ + I +D + +++DD G+ Sbjct: 204 EEFAKRARAYVVKLQSGDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTKDDVM-GESLYN 262 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + + +I+ +L +G E + T D + + G+ + + K DG Sbjct: 263 TMLPEIVADLKAKGLAVE-----SEGATVVYLDEYKNK-------DGEPMGVIIQKKDGG 310 Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382 Y Y D+A K +YE G D ++Y + S + V++ V +V + Sbjct: 311 YLYTTTDIACAKYRYETLGADRVLYYIDSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFG 370 Query: 383 VLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LRHVVDEVGSDSVR 423 ++L + + + R G +K+S +RAG I L+ VV+ VG +V+ Sbjct: 371 MMLGKDGKPFKTRSGGTVKLSDLLDEAIERAGKLIAEKNPDMPADELKQVVEAVGIGAVK 430 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + L + + FD+ + N Y+QYAY R S+F++A +L L Sbjct: 431 YADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSVFKRAGIDESNLTLPL---- 485 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 VI ++ E L L ++ +I P+ + YLYDLA +F + H Sbjct: 486 VITEDRE-----AALATRLLQFEEIITTVAREGTPHVMCSYLYDLAGLFSSFYEH----- 535 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + A++ + RL+L A + GL+ +G+++ M Sbjct: 536 -CQILNADSEESRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 576 >gi|157145345|ref|YP_001452664.1| arginyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895] gi|166232776|sp|A8AFG5|SYR_CITK8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|157082550|gb|ABV12228.1| hypothetical protein CKO_01085 [Citrobacter koseri ATCC BAA-895] Length = 577 Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 142/590 (24%), Positives = 246/590 (41%), Gaps = 96/590 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTK--VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + S R + K K V I++ + N MHVGH R ++GD + F G+ Sbjct: 97 QQALAS----ERLGVAKPAKQTVVIDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADK 216 V R ++ D G Q L + W +Q N +DL EG+Y A K Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQQENAGEMALADL-EGFYRD----------AKK 198 Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIR 274 + E F E +VK +Q D + L DI ++++ ++R + + R Sbjct: 199 HYDEDEAFAERARNYVVK---LQGGDPYFLDMWRKLV---DITMTQNQITYNRLNVTLTR 252 Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF---RSTMVGDDVDRPLLKSDGSY 331 D + + + GI+ K++ + + ++F G+ + + K DG Y Sbjct: 253 DDVMGESLYNPMLPGIVADLKAQGL-AVESEGATVVFLDEYKNKEGEPMGVIIQKKDGGY 311 Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINV 383 Y D+A K +YE D ++Y + S + V++ V +V + + Sbjct: 312 LYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGM 371 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416 +L +DG P K RAG + L ++DE Sbjct: 372 MLG------KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANA 423 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG +V++ L + + FD+ + + N Y+QYAY R S+FR+A ++D Sbjct: 424 VGIGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EID 477 Query: 477 FD-LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 L V+ +E E QL L ++ + P+ + YLYD+A +F G Sbjct: 478 ESALSSAPVVIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDIAGLFSGF 533 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + H + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 534 YEH------CPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|324113611|gb|EGC07586.1| arginyl-tRNA synthetase [Escherichia fergusonii B253] Length = 577 Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 144/583 (24%), Positives = 246/583 (42%), Gaps = 82/583 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAENV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G K T V +++ + N MHVGH R ++GD + F G++V Sbjct: 97 QQALKSD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + W +Q N +DL EG+Y A K+ Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMALADL-EGFYRD----------AKKHY 200 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276 E F E +VK +Q+ + R+ + L DI ++++ + R + + RD Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333 + + + GI+ K+K + + ++F GD + + K DG Y Y Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389 D+A K +YE D ++Y + S ++ + A+ A V E + + + Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422 L +DG P K RAG + L ++DE VG +V Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 ++ L + + FD+ + + N Y+QYAY R S+FR K + + P Sbjct: 430 KYADLSKNRTTDYVFDWDNML-AFEGNTAPYMQYAYTRVLSVFR--KAEIAEEELAAAP- 485 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 VI +E E QL L ++ + P+ + YLYDLA +F + H Sbjct: 486 -VIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSSFYEH---- 536 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 537 --CPILSAENEEVRNSRLKLALLTAKTLKLGLDTLGIETVERM 577 >gi|323255049|gb|EGA38837.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] Length = 577 Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 140/586 (23%), Positives = 240/586 (40%), Gaps = 88/586 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + + V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLSGIASKVEIAGPGFINIFLEPAFLAEQV 96 Query: 103 SSIVVSGIEYGRNLIGKGTK--VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + S R + + T+ + +++ + N MHVGH R ++GD + F G+ Sbjct: 97 QQALAS----ERLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHH 152 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 V R ++ D G Q L + W +Q N D+ G Y A K+ E Sbjct: 153 VIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLEGFYRD------AKKHYDE 202 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIID 278 F E +VK S A + + L DI ++++ + R + + RD + Sbjct: 203 DEAFAERARNYVVKLQSGDAYFREMWRKLV------DITMTQNQITYDRLNVTLTRDDVM 256 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335 + + GI+ K+K + + ++F GD + + K DG Y Y Sbjct: 257 GESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGDPMGVIIQKKDGGYLYTT 315 Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387 D+A K +YE D ++Y + S + V++ V +V + ++L Sbjct: 316 TDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMMLG- 374 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420 +DG +K RAG + L ++DE VG Sbjct: 375 -----KDGNRLK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIG 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-L 479 +V++ L + + FD+ + + N Y+QYAY R S+FR+A D+D L Sbjct: 428 AVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----DIDEQAL 481 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 VI E E QL L ++ + P+ + YLYD+A +F G + H Sbjct: 482 ASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH- 536 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N + RL+L A + GL+ +G+E+ M Sbjct: 537 -----CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|260663474|ref|ZP_05864364.1| arginyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN] gi|260552015|gb|EEX25068.1| arginyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN] Length = 562 Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 150/596 (25%), Positives = 259/596 (43%), Gaps = 104/596 (17%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +ERP+D +G + L++ L P IA + +I + V +AG +IN +L Sbjct: 27 LERPKDAKNGDYAF-PTFFLAKELHRAPQVIASELAEQID-QSGFERVVVAGP-YINFFL 83 Query: 94 SPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 + + +IL++++ YG +G V I+ S N PM +GH R V+G+ +A+ Sbjct: 84 DKASVGGEILAAVLADPANYGSTDLGHQGHVTIDLSSPNIAKPMGMGHLRSTVIGNAIAN 143 Query: 153 LMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGVYLK---- 207 ++A Y R ++ D G Q L A W + + + + + YY + + Sbjct: 144 ILAKVNYVPVRINHLGDWGTQFGKLMAAYEMWGDEAEVQKDPINTLQKYYVKINTEADEH 203 Query: 208 ----HVGKELADKYSSELLNFPEE----KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259 +G+E K PE KW ++ S+Q MKI L+I D F Sbjct: 204 PEYDDLGREWFAKLEQ---GDPEAQRLWKWF---REVSLQRFMKI----YNLLDIDFDSF 253 Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319 E ++ + +++ L + + E S+ + D+++ L M+ Sbjct: 254 NGEAFYN----DKMDEVVTLLEDKQLLKE-------SRGAEIVDLEKYDL--NPAMI--- 297 Query: 320 VDRPLLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 KSDGS Y DLA + K Y +YV+G++ S + +L+AV + + Sbjct: 298 -----RKSDGSTLYLTRDLAAALFRKRMYHHA--QSLYVVGAEQSNHFAQLKAVLSEMGF 350 Query: 377 KKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLR------------------------ 411 + QI+ + L+ L +G KMS R G+ I L Sbjct: 351 TWSDQIHHIPFGLMSL--NGK--KMSTRKGNIIQLEDVLNDSIKLARQQIEEKNPTLANA 406 Query: 412 -HVVDEVGSDSVRFMMLWRKNSELLDFDFCKV-KEQSKENPVFYVQYAYARCRSIFRQAK 469 V +EVG +V F L + + +DF +V K + + P YVQYA+AR SI R+A Sbjct: 407 DQVAEEVGVGAVIFHDLKNERTNSVDFKLEEVVKFEGETGP--YVQYAHARAESILRKAG 464 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 F+ V QE+ ++ + +Y I A +P + Y LA Sbjct: 465 RP----SFEGATLTVDGQEA------WEVAKKIGQYQETIVRAANEYDPSLIGKYALSLA 514 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ +++H R ++ +++KL+ RL LV AV+ ++ S L ++GV++P+EM Sbjct: 515 KSFNQYYAH------TRILEEDDQKLS--RLALVQAVSDVLKSALALLGVKAPDEM 562 >gi|283785614|ref|YP_003365479.1| arginyl-tRNA synthetase [Citrobacter rodentium ICC168] gi|282949068|emb|CBG88673.1| arginyl-tRNA synthetase [Citrobacter rodentium ICC168] Length = 577 Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 140/589 (23%), Positives = 244/589 (41%), Gaps = 94/589 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAENV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S E I + V +++ + N MHVGH R ++GD + F G+ V Sbjct: 97 QQALNS--ERLGVAIPEKQTVVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222 R ++ D G Q L ++ + QQ N ++ G Y + A K+ E Sbjct: 155 RANHVGDWGTQFGML-IAYLEKQQQ---ENAGEMALADLEGFYRE------AKKHYDEDE 204 Query: 223 NFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRD 275 F E +VK +Y +Q K++ DI +S++ + R + + RD Sbjct: 205 AFAERARSYVVKLQGGDEYFLQMWRKLV-----------DITMSQNQITYDRLNVTLTRD 253 Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSDGSYT 332 + + + GI+ K+K + + ++F G+ + + K DG Y Sbjct: 254 DVMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEYKNKEGEPMGVIIQKKDGGYL 312 Query: 333 YFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVL 384 Y D+A K +YE D ++Y + S + V++ V +V + ++ Sbjct: 313 YTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFGMM 372 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------V 417 L +DG P K RAG + L ++DE V Sbjct: 373 LG------KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMSADELEKLANAV 424 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G +V++ L + + FD+ + + N Y+QYAY R S+FR++ LD Sbjct: 425 GIGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKS-----GLDE 478 Query: 478 D-LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 L VI +E E QL L ++ + P+ + YLYD+A +F G + Sbjct: 479 SALAAAPVILREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFY 534 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H + A N ++ RL+L A + GL+ +G+E+ M Sbjct: 535 EH------CPILSAENDEVRNSRLKLALLTAKTLKLGLDTLGIETVERM 577 >gi|330984740|gb|EGH82843.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 578 Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 140/602 (23%), Positives = 248/602 (41%), Gaps = 101/602 (16%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE ++A + D V V IAG GF+N Sbjct: 30 IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + + ++ G +V ++ + N MHVGH R ++GD +A Sbjct: 90 FQN-TAALAARLDAALADAHLSVRKAGAVQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ F G V R+ ++ D G Q L + + + A + SDL E +Y Sbjct: 149 NVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263 A + E F E +VK + A + K +++ H ++ ++ Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLALWTRFKDISLSHCQETYERLNVKLTPA 255 Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 D G+ + + ++++ L G + E S Q ++ FR+ DD Sbjct: 256 DVM-GESAYNDDLANVVNYLKATGLLVE-------SNGAQCVFLEE----FRT---ADDT 300 Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374 P++ K+ G Y Y DLA ++ K + D ++Y + + + +++ VA A Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKA-DRVLYFVDQRQALHFQQVFEVARRAGF 359 Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410 Q+ + + RDG +K+ +RA + L Sbjct: 360 VHDGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEVEL 419 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQMLS-FEGNTAPYLLYAYTRVAGVFRKL-- 476 Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 FD ++ PQE E L LA++ + N P+ L YLYD Sbjct: 477 ---GTPFDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYD 526 Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 LA +F + + G ENP + RL+L S + GL+++G+E+ Sbjct: 527 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGSTLKQGLDLLGLETLE 576 Query: 584 EM 585 M Sbjct: 577 RM 578 >gi|298485092|ref|ZP_07003188.1| Arginyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160344|gb|EFI01369.1| Arginyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 578 Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 139/602 (23%), Positives = 248/602 (41%), Gaps = 101/602 (16%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE ++A + D V V IAG GF+N Sbjct: 30 IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + + ++ G +V ++ + N MHVGH R ++GD +A Sbjct: 90 FQN-TAALAARLDAALADAHLSVRKAGAVQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ F G V R+ ++ D G Q L + + + A + SDL E +Y Sbjct: 149 NVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263 A + E F E +VK + A + K +++ H ++ ++ Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLALWTRFKDISLSHCQETYERLNVKLTPA 255 Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 D G+ + + +++++L G + E S Q ++ FR+ DD Sbjct: 256 DVM-GESAYNDDLANVVNDLKATGLLVE-------SNGAQCVFLEE----FRT---ADDT 300 Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374 P++ K+ G Y Y DLA ++ K + D ++Y + + + +++ VA A Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKA-DRVLYFVDQRQALHFQQVFEVARRAGF 359 Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410 Q+ + + RDG +K+ +RA + L Sbjct: 360 VHDGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEAEL 419 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKLGS 478 Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 FD ++ PQE E L LA++ + N P+ L YLYD Sbjct: 479 A-----FDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYD 526 Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 LA +F + + G ENP + RL+L + GL+++G+E+ Sbjct: 527 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 576 Query: 584 EM 585 M Sbjct: 577 RM 578 >gi|62897153|dbj|BAD96517.1| arginyl-tRNA synthetase variant [Homo sapiens] Length = 660 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 143/598 (23%), Positives = 254/598 (42%), Gaps = 103/598 (17%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S+ L ++P IAE I + + ++ V IAG GFIN++L + Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDF 170 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + L+S++V+G++ +G+ KV ++F S N MHVGH R ++G++++ L F+ Sbjct: 171 VSEQLTSLLVNGVQLP--ALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFA 228 Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198 GY+V R ++ D G Q L L VF++ + ++ + + + Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKK 288 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y V L GK N K ++ D S Q + KI AL++ I Sbjct: 289 RAYQCVVLLQ-GK-----------NPDITKAWKLICDVSRQELNKI----YDALDVSL-I 331 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 E + G + DI+ +G+V + D D ++++F + G Sbjct: 332 ERGESFYQDG----MNDIVKEFEDRGFV--------------QVD-DGRKIVF---VPGC 369 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV--- 374 + ++KSDG YTY +DLA K + +E D +IYV+ + S + + + A A + Sbjct: 370 SIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHFQTIFAAAQMIGWY 429 Query: 375 ----------------SEKKAQINVLLCELVRLYR---DGMPIKMSK---RAGDFI---- 408 E K + E VRL +G+ M K + D + Sbjct: 430 DPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSMDKLKEKERDKVLAAE 489 Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 L V +++ L F F K+ + + N Y+ YA+ R RSI R A Sbjct: 490 ELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA 548 Query: 469 KDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 ++D ++ + + D E +L + +P +++ + L Y+Y+ Sbjct: 549 -----NIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYE 603 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA+ F + + R K+ M R+ L AVA+++ G +I+G++ M Sbjct: 604 LATAFTEFYDSCYCVEKDRQT-GKILKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660 >gi|184155809|ref|YP_001844149.1| arginyl-tRNA synthase [Lactobacillus fermentum IFO 3956] gi|229470718|sp|B2GDD7|SYR_LACF3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|183227153|dbj|BAG27669.1| arginyl-tRNA synthase [Lactobacillus fermentum IFO 3956] Length = 562 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 150/596 (25%), Positives = 259/596 (43%), Gaps = 104/596 (17%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +ERP+D +G + L++ L P IA + +I + V +AG +IN +L Sbjct: 27 LERPKDAKNGDYAF-PTFFLAKELHRAPQVIASELAEQID-QSGFERVVVAGP-YINFFL 83 Query: 94 SPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 + + +IL++++ YG +G V I+ S N PM +GH R V+G+ +A+ Sbjct: 84 DKASVGGEILAAVLADPANYGSTDLGHQGHVTIDLSSPNIAKPMGMGHLRSTVIGNAIAN 143 Query: 153 LMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGVYLK---- 207 ++A Y R ++ D G Q L A W + + + + + YY + + Sbjct: 144 ILAKVNYVPVRINHLGDWGTQFGKLMAAYEMWGDEAEVQKDPINTLQKYYVKINTEADEH 203 Query: 208 ----HVGKELADKYSSELLNFPEE----KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259 +G+E K PE KW ++ S+Q MKI L+I D F Sbjct: 204 PEYDDLGREWFAKLEQ---GDPEAQRLWKWF---REVSLQRFMKI----YNLLDIDFDSF 253 Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319 E ++ + +++ L + + E S+ + D+++ L M+ Sbjct: 254 NGEAFYN----DKMDEVVTLLEDKQLLKE-------SRGAEIIDLEKYDL--NPAMI--- 297 Query: 320 VDRPLLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 KSDGS Y DLA + K Y +YV+G++ S + +L+AV + + Sbjct: 298 -----RKSDGSTLYLTRDLAAALFRKRMYHHA--QSLYVVGAEQSNHFAQLKAVLSEMGF 350 Query: 377 KKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLR------------------------ 411 + QI+ + L+ L +G KMS R G+ I L Sbjct: 351 TWSDQIHHIPFGLMSL--NGK--KMSTRKGNIIQLEDVLNDSIKLARQQIEEKNPTLANA 406 Query: 412 -HVVDEVGSDSVRFMMLWRKNSELLDFDFCKV-KEQSKENPVFYVQYAYARCRSIFRQAK 469 V +EVG +V F L + + +DF +V K + + P YVQYA+AR SI R+A Sbjct: 407 DQVAEEVGVGAVIFHDLKNERTNSVDFKLEEVVKFEGETGP--YVQYAHARAESILRKAG 464 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 F+ V QE+ ++ + +Y I A +P + Y LA Sbjct: 465 RP----SFEGATLTVDGQEA------WEVAKKIGQYQETIVRAANEYDPSLIGKYALSLA 514 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ +++H R ++ +++KL+ RL LV AV+ ++ S L ++GV++P+EM Sbjct: 515 KSFNQYYAH------TRILEEDDQKLS--RLALVQAVSDVLKSALALLGVKAPDEM 562 >gi|28378123|ref|NP_785015.1| arginyl-tRNA synthetase [Lactobacillus plantarum WCFS1] gi|254556331|ref|YP_003062748.1| arginyl-tRNA synthetase [Lactobacillus plantarum JDM1] gi|38258334|sp|Q88X53|SYR_LACPL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|28270958|emb|CAD63862.1| arginine--tRNA ligase [Lactobacillus plantarum WCFS1] gi|254045258|gb|ACT62051.1| arginyl-tRNA synthetase [Lactobacillus plantarum JDM1] Length = 562 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 148/603 (24%), Positives = 264/603 (43%), Gaps = 100/603 (16%) Query: 24 VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83 ++ ILD+I E+P+ G L+ L++ L P IA IV ++ D + V Sbjct: 19 TQEAILDKI--EQPKTSKQGDLAF-PTFTLAKTLHKAPQMIASDIVEKVD-SSDFEKVVA 74 Query: 84 AGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 G ++N + ++ IL+ ++ +G +G +G+ +V I+ S N P+ +GH R Sbjct: 75 MGP-YVNFFFKKDAFAADILNQVLSNGGHFGDAKLGEAGQVPIDMSSPNIAKPISMGHLR 133 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYY 201 V+G++LA++++ Y+ + ++ D G Q L + W + + + + YY Sbjct: 134 STVIGNSLANILSKLDYQPVKINHLGDWGTQFGKLITAYKMWGSEAEVKADPINNLLKYY 193 Query: 202 PGVYLKHVGKELADKYSSE----LLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKAL 252 + + V D + E L N EE W + S++A KI + L Sbjct: 194 VRFHKEDVDHPEMDDEAREWFKKLENGDEEATHLWSWF---RSESLKAFKKIYQ----RL 246 Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312 +I D F E ++ +++++D L + + E S+ + D+ + L Sbjct: 247 DIDFDSFKGEAFYN----DKMQEVVDILEDKHLLQE-------SQGAEVVDLSKYDL--- 292 Query: 313 STMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRL 367 P L KSDG+ Y DLA Y K Y+ F +YV+G++ + + K+L Sbjct: 293 ---------NPALIKKSDGATLYITRDLAAAIYRKRTYD--FVQSLYVVGNEQTNHFKQL 341 Query: 368 EAVAAAVSEKKA-QINVLLCELVR------LYRDGMPIKMSKRAGDFITLRH-------- 412 +AV + A QI+ + L+ R G I + K D + L H Sbjct: 342 KAVLTEMGFDWADQIHHIPFGLITSGGKKLSTRSGRVILLDKVLDDAVALAHEQIEAKNP 401 Query: 413 -------VVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCR 462 V D VG +V F L KN + FDF V+ + + P YVQYA+AR Sbjct: 402 DLPNKDEVADAVGIGAVVFHDL--KNERMNSFDFNLEEVVRFEGETGP--YVQYAHARAE 457 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 SI R+A P +++ D + + L+E+P + A+ EP +A Sbjct: 458 SILRKAGS----------PEIAATEQTLSDPAAWDTLKLLSEFPATVVRASTEYEPSVIA 507 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 Y LA ++ ++++ + + + +L RL LV +V+ ++ L ++GV++P Sbjct: 508 KYAIHLAKAYNKYYANTK-------ILVEDDELN-ARLALVKSVSIVLKEALRLLGVKAP 559 Query: 583 NEM 585 +EM Sbjct: 560 DEM 562 >gi|227515597|ref|ZP_03945646.1| arginine--tRNA ligase [Lactobacillus fermentum ATCC 14931] gi|227086027|gb|EEI21339.1| arginine--tRNA ligase [Lactobacillus fermentum ATCC 14931] gi|299783442|gb|ADJ41440.1| Arginine--tRNA ligase [Lactobacillus fermentum CECT 5716] Length = 562 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 150/596 (25%), Positives = 259/596 (43%), Gaps = 104/596 (17%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +ERP+D +G + L++ L P IA + +I + V +AG +IN +L Sbjct: 27 LERPKDAKNGDYAF-PTFFLAKELHKAPQMIASELAEQID-QSGFEKVVVAGP-YINFFL 83 Query: 94 SPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 + + +IL++++ YG +G V I+ S N PM +GH R V+G+ +A+ Sbjct: 84 DKASVGGEILAAVLADPANYGSTDLGHQGHVTIDLSSPNIAKPMGMGHLRSTVIGNAIAN 143 Query: 153 LMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGVYLK---- 207 ++A Y R ++ D G Q L A W + + + + + YY + + Sbjct: 144 ILAKVNYVPVRINHLGDWGTQFGKLMAAYEMWGDEAEVQKDPINTLQKYYVKINTEADEH 203 Query: 208 ----HVGKELADKYSSELLNFPEE----KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259 +G+E K PE KW ++ S+Q MKI L+I D F Sbjct: 204 PEYDDLGREWFAKLEQ---GDPEAQRLWKWF---REVSLQRFMKI----YNLLDIDFDSF 253 Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319 E ++ + +++ L + + E S+ + D+++ L M+ Sbjct: 254 NGEAFYN----DKMDEVVTLLEDKQLLKE-------SRGAEIIDLEKYDL--NPAMI--- 297 Query: 320 VDRPLLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 KSDGS Y DLA + K Y +YV+G++ S + +L+AV + + Sbjct: 298 -----RKSDGSTLYLTRDLAAALFRKRMYHHA--QSLYVVGAEQSNHFAQLKAVLSEMGF 350 Query: 377 KKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLR------------------------ 411 + QI+ + L+ L +G KMS R G+ I L Sbjct: 351 TWSDQIHHIPFGLMSL--NGK--KMSTRKGNIIQLEDVLNDSIKLARQQIEEKNPTLANA 406 Query: 412 -HVVDEVGSDSVRFMMLWRKNSELLDFDFCKV-KEQSKENPVFYVQYAYARCRSIFRQAK 469 V +EVG +V F L + + +DF +V K + + P YVQYA+AR SI R+A Sbjct: 407 DQVAEEVGVGAVIFHDLKNERTNSVDFKLEEVVKFEGETGP--YVQYAHARAESILRKAG 464 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 F+ V QE+ ++ + +Y I A +P + Y LA Sbjct: 465 RP----SFEGATLTVDGQEA------WEVAKKIGQYQETIVRAANEYDPSLIGKYALSLA 514 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ +++H R ++ +++KL+ RL LV AV+ ++ S L ++GV++P+EM Sbjct: 515 KSFNQYYAH------TRILEEDDQKLS--RLALVQAVSDVLKSALALLGVKAPDEM 562 >gi|109897684|ref|YP_660939.1| arginyl-tRNA synthetase [Pseudoalteromonas atlantica T6c] gi|123064815|sp|Q15W53|SYR_PSEA6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|109699965|gb|ABG39885.1| arginyl-tRNA synthetase [Pseudoalteromonas atlantica T6c] Length = 578 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 144/590 (24%), Positives = 246/590 (41%), Gaps = 77/590 (13%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 + R G N AM L++ L P IAE IV +++D + + +AG GFIN+YL Sbjct: 28 LSRATKVGFGDYQFNGAMALAKVLKQKPRDIAEKIVEAVELDGIAEKLEVAGPGFINIYL 87 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 S +L LS + + N+ + TK V +++ S N MHVGH R ++GD + Sbjct: 88 SKEWLAAQLSH---AAADPRLNIESQPTKTVVVDYSSPNLAKEMHVGHLRTTIIGDAVVK 144 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 + F G++V R+ ++ D G Q L L + + L L + Sbjct: 145 ALEFMGHKVIRQNHMGDWGTQFGML-----------LAHLNDKLESNQVAETAL----SD 189 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD-----IFISEDDFHR 267 L D Y + F EE+ D + + ++K+ D L + + I SE+ +H+ Sbjct: 190 LEDFYREAKVRFDEEEGFA---DRAREYVVKLQGGDSHCLALWQNFIDVSITHSEEVYHK 246 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPL 324 + S RD I + + ++ ++K + Q++F + G+ + Sbjct: 247 LNVSLTRDDIMGESAYNHDLANVVSELQAKGL-AVESQGAQVVFLPELADKEGNPAAYIV 305 Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383 KS G Y Y DLA + + ++ D + + + + + K+ E VA + + Sbjct: 306 QKSGGGYLYATTDLAAIRHRNKQLHADRTLILTDARQALHFKQTELVARKAGFIEPEQTY 365 Query: 384 LLCEL-VRLYRDGMPIK-----------------------MSKRAGDFIT--LRHVVDEV 417 C + L DG P K +SKR D + L+ + +++ Sbjct: 366 EHCPFGMMLGNDGRPFKTRTGGTVKLVELLDEAVERAETLLSKRETDLSSDELKVLANKI 425 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARCRSIFRQAKDIFPDLD 476 G +V++ L + + D+ F S E N Y+QYAY R SIFR+A L+ Sbjct: 426 GIGAVKYADLSKNRT--TDYMFSWDSMLSFEGNTAPYLQYAYTRVMSIFRKAGVDHQTLN 483 Query: 477 FDLFPRNV-IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 P ++ PQE +LQ Y I P+ L YLY+LAS+F Sbjct: 484 ---APISLDAPQEKILAVKQLQ-------YVEAINQVIAEGTPHVLCTYLYELASLFMSF 533 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P L+ + + R+ L A + SGL+++G+++ M Sbjct: 534 Y---EACPMLK--DGIEQDVRDSRMTLAALTAKTLQSGLSLLGIDTMERM 578 >gi|170024389|ref|YP_001720894.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII] gi|238688454|sp|B1JLM2|SYR_YERPY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|169750923|gb|ACA68441.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII] Length = 576 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 138/594 (23%), Positives = 240/594 (40%), Gaps = 105/594 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE +V + + + IAG GFIN++L + Sbjct: 37 GDYQANGVMAVAKKLGMQPRQLAERVVELLDLTGIASKIEIAGPGFINIFLDRQW----- 91 Query: 103 SSIVVSGIEYGRNLIGKGTK------VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 V +EY G + +++ + N MHVGH R ++GD +AF Sbjct: 92 ---VAEKVEYALTAPKLGVTPVEPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAF 148 Query: 157 SGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPE 198 G+ V R ++ D G Q L L +F YQQA D D Sbjct: 149 LGHNVIRANHVGDWGTQFGMLIAYLEKMQNENASDMGLSDLELF--YQQAKKTYDEDEEF 206 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y+ V + D+Y ++ W +V D ++ A ++ D L + + D Sbjct: 207 ALRARAYV--VKLQSGDEYCRQM-------WRKLV-DITM-AQNQVAYDRLN-VTLTKDD 254 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + E ++ P +I+ +L +G E + T D + + G+ Sbjct: 255 VMGESLYNAMLP----EIVADLKAKGLAVE-----SEGATVVYLDEYKNK-------DGE 298 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370 + + K DG Y Y D+A K +YE G D ++Y + S + V++ V Sbjct: 299 PMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRILYYIDSRQHQHLMQAWTIVRKAGYV 358 Query: 371 AAAVSEKKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LR 411 +V + ++L + + + R G +K+S +RAG I L+ Sbjct: 359 PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLDEAVERAGKLIAEKNPDMPADELK 418 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 V++ VG +V++ L + + FD+ + N Y+QYAY R S+FR+A Sbjct: 419 QVINAVGIGAVKYADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSVFRRAGVD 477 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 L L VI ++ E L L ++ +I P+ + YLYDLA + Sbjct: 478 ESSLTLPL----VITEDRE-----AALATRLLQFEEIITTVAREGTPHVMCSYLYDLAGL 528 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + H + + A + ++ RL+L A + GL+ +G+++ M Sbjct: 529 FSSFYEH------CQILNAESEEIRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 576 >gi|326928305|ref|XP_003210321.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Meleagris gallopavo] Length = 648 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 136/586 (23%), Positives = 251/586 (42%), Gaps = 78/586 (13%) Query: 43 GHLSTNAAM------ILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS 96 G N+AM + +R + P IAE I I + ++ V IAG GFIN++L Sbjct: 98 GDYQCNSAMGITQILLKTREQKVSPREIAEKITKHIPANECIEKVEIAGPGFINVHLRKD 157 Query: 97 YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 ++ K LSS++V+G++ IGK +V ++F S N MHVGH R ++G+++ L F Sbjct: 158 FVSKQLSSLLVNGVQ--PPAIGKRKRVILDFSSPNIAKEMHVGHLRSTIIGESMCRLFEF 215 Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELA 214 +GY+V R ++ D G Q L + ++ L + DL + +Y + +E Sbjct: 216 AGYDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKRRFDTEEEF 274 Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---S 271 K + + + + K +K + + + + R + + + D+ ++E RG+ Sbjct: 275 KKRAYQCVVLLQSKDPDFIKAWEL--ICDVSRKEFQKIYNCLDVTLTE----RGESFYQD 328 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 ++DI+ +G+V + D RK + + G V ++KSDG Y Sbjct: 329 MMKDIVKEFEDKGFV--------------QVDDGRKVVF----VPGFSVPLTIVKSDGGY 370 Query: 332 TYFAADLAYFKCKY--ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 TY +DLA + + E+G D +IYV+ S S +++ + A + + + Sbjct: 371 TYDTSDLAALRHRLLEEKG-DILIYVVDSGQSVHLQTVFAAGQMIGWYDPTVTRITHAAF 429 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------------VGSD 420 + K R+GD + L +++E V Sbjct: 430 GVVLGEDKKKFKTRSGDAVRLMDLLEEGLKRAMDKLKDKERDKVLTPEELKAAQVSVAFG 489 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +++ L F F K+ + + N Y+ YA+ R R+I R A ++D ++ Sbjct: 490 CIKYADLSHNRLNDYVFSFDKMLD-DRGNTAAYLLYAFTRIRAIARLA-----NIDEEML 543 Query: 481 PRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + D E +L + +P +++ + L YLY+LA+ F + + Sbjct: 544 RKAAREEALVLDHEKEWKLGKCILRFPEILQKILDDLLLHTLCDYLYELATTFTEFYDNC 603 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R K+ M RL L A A+I+ G +I+G++ M Sbjct: 604 YCVEKDR-QSGQIVKVNMWRLLLCEATATIMAKGFDILGIKPVERM 648 >gi|322386535|ref|ZP_08060162.1| arginine--tRNA ligase [Streptococcus cristatus ATCC 51100] gi|321269454|gb|EFX52387.1| arginine--tRNA ligase [Streptococcus cristatus ATCC 51100] Length = 562 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 150/606 (24%), Positives = 252/606 (41%), Gaps = 122/606 (20%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E+P+ G ++ A L++ P IA I KIDP +A ++N + Sbjct: 26 LLEQPKSSDLGDIAF-PAFSLAKVERKAPQAIAADIAE--KIDPSHFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+ + + +++ ++ G +YG+ G+G + I+ S N P VGH R V+GD L+ Sbjct: 83 LNKAKISDQVIKEVIKEGADYGQQNEGQGGNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY + ++ D G Q L ++ W ++A+ N D Sbjct: 143 NIFRKMGYNTIKINHLGDWGKQFGLLMVAYKKWGNKEAVEANPID--------------- 187 Query: 211 KELADKY---SSELLNFP---EEK--WLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIF 259 EL Y ++E+ N P EE W ++D +A + + RD+ L N +++ Sbjct: 188 -ELLQLYVRINAEIENDPALDEEGRLWFKKLEDGDPEATELWQWFRDESLVEFNRIYELL 246 Query: 260 ISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 E D G+ + + + L +G + E SK D+D Sbjct: 247 GVEFDSLNGEAFYNDKMDEAVKILEDKGLLKE-------SKGASIVDLD----------- 288 Query: 317 GDDVDRP---LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA 372 DV+ P + KSDG+ Y D+A + F +YV+G + S + ++L+AV Sbjct: 289 --DVNLPPAMIKKSDGATLYITRDIATAMYRARTYNFVKNVYVVGQEQSNHFRQLKAVLK 346 Query: 373 AV----SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416 + S+ ++ L R K+S R G+ I L + E Sbjct: 347 KMGFDWSDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLQEAISRAKAQIEEK 399 Query: 417 -------------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCR 462 VG +V+F L DFD V + + P YVQYAYAR + Sbjct: 400 NPNLENKEAVAHAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YVQYAYARIQ 457 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 SI R+A D P LD + + N D ++I L ++ RV++ A EP +A Sbjct: 458 SILRKA-DFKPSLDVN-YNLN--------DAESWEIIKLLQDFARVVKRAADNFEPSLIA 507 Query: 523 FYLYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 Y LA F+ +++H R E+P RL L + A ++ L ++GV Sbjct: 508 KYAISLAQAFNKYYAHTRILDESPERD-----------SRLALSYTTAVVLKEALRMLGV 556 Query: 580 ESPNEM 585 E+P +M Sbjct: 557 EAPEKM 562 >gi|307710197|ref|ZP_07646641.1| arginyl-tRNA synthetase [Streptococcus mitis SK564] gi|307619177|gb|EFN98309.1| arginyl-tRNA synthetase [Streptococcus mitis SK564] Length = 563 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 141/592 (23%), Positives = 255/592 (43%), Gaps = 93/592 (15%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G ++ A + + AEL KI+ +A ++N + Sbjct: 26 LLETPKNSEMGDIAFPAFSLAKVERKAPQMIAAELAE---KINSQSFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + ++L +++ Y IGK V I+ S N P +GH R V+GD+L+ Sbjct: 83 LDKSAISAQVLQAVITEKEHYADQNIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + GY+ + ++ D G Q L ++ W ++A+ + D Y + + Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGNEEAVKAHPIDELLKLYVRINAEAEN 202 Query: 211 KELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKIIR--DDLKALNIQHDIFISEDDF 265 D+ + E L +EK L + + + +++++ R ++LK ++ D + E + Sbjct: 203 DPSLDEEAREWFRKLENGDEKALSLWQWFRDESLVEFNRLYNELK---VEFDSYNGEAFY 259 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 + + ++D L+++G + E S+ Q ++++ ++ P L Sbjct: 260 N----DKMDAVVDILSKKGLLVE-------SEGAQVVNLEKY-----------GIEHPAL 297 Query: 326 --KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKKA 379 KSDG+ Y DLA Y K +Y+ F IYV+G + S + K+L+AV + + Sbjct: 298 IKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWSG 355 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 I + LV ++G K+S R G+ I L V E Sbjct: 356 DITHVPFGLVT--KEGK--KLSTRKGNVILLEPTVAEAVSRAKAQIEAKNPELENKDQVA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +++F L + DFD V + + P YVQYAYAR +SI R+A Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD---- 465 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 F S D ++I + ++PR+I A EP +A + LA F+ Sbjct: 466 ------FKPETAGNYSLNDAESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQAFN 519 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R + N + + RL L +A A ++ L ++GVE+P +M Sbjct: 520 KYYAH------TRILDENAERDS--RLALSYATAVVLKEALRLLGVEAPEKM 563 >gi|157371031|ref|YP_001479020.1| arginyl-tRNA synthetase [Serratia proteamaculans 568] gi|166987305|sp|A8GFK2|SYR_SERP5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|157322795|gb|ABV41892.1| arginyl-tRNA synthetase [Serratia proteamaculans 568] Length = 576 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 136/581 (23%), Positives = 251/581 (43%), Gaps = 79/581 (13%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE +V + + V IAG GFIN++L+ ++ + Sbjct: 37 GDYQANGVMSVAKKLGMPPRQLAEKVVQLLDLGDVASKVEIAGPGFINIFLNSQWVAQ-Q 95 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + V+S + + + T V I++ + N MHVGH R ++GD A F G++V Sbjct: 96 ADRVLSAPKLDIAPVKQQTIV-IDYSAPNVAKEMHVGHLRSTIIGDAAARTQEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGKELADKYSSEL 221 R ++ D G Q L Y + + N N SD+ Y + A K+ E Sbjct: 155 RANHVGDWGTQFGMLI-----AYLEKMQNENASDMGLSDLEQFYRE------AKKHYDED 203 Query: 222 LNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIR 274 +F E +VK Y ++ K++ DI ++++ ++R + + Sbjct: 204 ADFAERARAYVVKLQGGDQYCLKMWRKLV-----------DITMAQNQLTYNRLNVTLTE 252 Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSDGSY 331 D + + + GI+ K+K + + ++F G+ + + K DG Y Sbjct: 253 DDVMGESLYNAMLPGIVADLKAKGL-AVESEGATVVFLDEYKNKDGEPMGVIIQKKDGGY 311 Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINV 383 Y D+A K +YE G D ++Y + S + V++ + ++S + + Sbjct: 312 LYTTTDIACAKYRYETLGADRVLYYIDSRQHQHLMQAWTIVRKAGYIPDSLSLEHHMFGM 371 Query: 384 LLCELVRLY--RDGMPIKMSK-------RAGDFIT----------LRHVVDEVGSDSVRF 424 +L + + + R G +K+S RAG I ++ + + VG +V++ Sbjct: 372 MLGKDGKPFKTRSGGTVKLSDLLDEAVDRAGKLIAEKNPDMPAEEMQSLANAVGIGAVKY 431 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 L + + FD+ + + N Y+QYAY R S+F++A +L L V Sbjct: 432 ADLSKSRTTDYIFDWDNMLA-FEGNTAPYMQYAYTRVASVFKRAGVDESNLTLPL----V 486 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 + +E E + L L ++ VI P+ + YLYDLA +F G + H Sbjct: 487 MTEERE-----ITLATRLLQFEEVITTVAREGTPHVMCSYLYDLAGLFSGFYEH------ 535 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + A++ + RL+L A + GL+ +G+E+ M Sbjct: 536 CQILNADSEEARQSRLKLSLLTAKTLKVGLDTLGIETVERM 576 >gi|300769179|ref|ZP_07079067.1| arginine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180300|ref|YP_003924428.1| arginine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ST-III] gi|300493208|gb|EFK28388.1| arginine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045791|gb|ADN98334.1| arginine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 562 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 148/603 (24%), Positives = 264/603 (43%), Gaps = 100/603 (16%) Query: 24 VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83 ++ ILD+I E+P+ G L+ L++ L P IA IV ++ D + V Sbjct: 19 TQEAILDKI--EQPKTSKQGDLAF-PTFTLAKTLHKAPQMIASDIVEKVD-GSDFEKVVA 74 Query: 84 AGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 G ++N + ++ IL+ ++ +G +G +G+ +V I+ S N P+ +GH R Sbjct: 75 MGP-YVNFFFKKDAFAADILNQVLSNGGHFGDAKLGEAGQVPIDMSSPNIAKPISMGHLR 133 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYY 201 V+G++LA++++ Y+ + ++ D G Q L + W + + + + YY Sbjct: 134 STVIGNSLANILSKLDYQPVKINHLGDWGTQFGKLITAYKMWGSEAEVKADPINNLLKYY 193 Query: 202 PGVYLKHVGKELADKYSSE----LLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKAL 252 + + V D + E L N EE W + S++A KI + L Sbjct: 194 VRFHKEDVDHPEMDDEAREWFKKLENGDEEATHLWSWF---RSESLKAFKKIYQ----RL 246 Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312 +I D F E ++ +++++D L + + E S+ + D+ + L Sbjct: 247 DIDFDSFKGEAFYN----DKMQEVVDILEDKHLLQE-------SQGAEVVDLSKYDL--- 292 Query: 313 STMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRL 367 P L KSDG+ Y DLA Y K Y+ F +YV+G++ + + K+L Sbjct: 293 ---------NPALIKKSDGATLYITRDLAAAIYRKRTYD--FVQSLYVVGNEQTNHFKQL 341 Query: 368 EAVAAAVSEKKA-QINVLLCELVR------LYRDGMPIKMSKRAGDFITLRH-------- 412 +AV + A QI+ + L+ R G I + K D + L H Sbjct: 342 KAVLTEMGFDWADQIHHIPFGLITSGGKKLSTRSGRVILLDKVLDDAVALAHEQIEAKNP 401 Query: 413 -------VVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCR 462 V D VG +V F L KN + FDF V+ + + P YVQYA+AR Sbjct: 402 DLPNKDEVADAVGIGAVVFHDL--KNERMNSFDFNLEEVVRFEGETGP--YVQYAHARAE 457 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 SI R+A P +++ D + + L+E+P + A+ EP +A Sbjct: 458 SILRKAGS----------PEIAATEQTLSDPAAWDTLKLLSEFPATVVRASTEYEPSVIA 507 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 Y LA ++ ++++ + + + +L RL LV +V+ ++ L ++GV++P Sbjct: 508 KYAIHLAKAYNKYYANTK-------ILVEDDELN-ARLALVKSVSIVLKEALRLLGVKAP 559 Query: 583 NEM 585 +EM Sbjct: 560 DEM 562 >gi|148998128|ref|ZP_01825641.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70] gi|168577111|ref|ZP_02722931.1| arginyl-tRNA synthetase [Streptococcus pneumoniae MLV-016] gi|307068691|ref|YP_003877657.1| arginyl-tRNA synthetase [Streptococcus pneumoniae AP200] gi|147756138|gb|EDK63181.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70] gi|183577269|gb|EDT97797.1| arginyl-tRNA synthetase [Streptococcus pneumoniae MLV-016] gi|306410228|gb|ADM85655.1| Arginyl-tRNA synthetase [Streptococcus pneumoniae AP200] Length = 563 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 141/595 (23%), Positives = 249/595 (41%), Gaps = 99/595 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G ++ A + + AEL K++ +A ++N + Sbjct: 26 LLETPKNSEMGDIAFPAFSLAKVERKAPQMIAAELAE---KMNSQAFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + ++L ++ Y IGK V I+ S N P +GH R V+GD+L+ Sbjct: 83 LDKSAISAQVLQAVTTEKEHYADQNIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + GY+ + ++ D G Q L ++ W ++A+ + D LK Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194 Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267 + A+ + L+ +W ++ D A+ + RD+ L N ++ E D + Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELKVEFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + ++D L+ +G + E S+ Q ++++ ++ P Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLLE-------SEGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L KSDG+ Y DLA Y K +Y+ F IYV+G + S + K+L+AV + + Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 ++ + ++G K+S R G+ I L V E Sbjct: 355 D-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAVSRAKVQIEAKNPELENKDQVA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +++F L + DFD V + + P YVQYAYAR +SI R+A Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD---- 465 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 F + S DT ++I + ++PR+I A EP +A + LA F+ Sbjct: 466 ------FKPEIAGNYSLNDTESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQSFN 519 Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R E+P RL L +A A ++ L ++GVE+P +M Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563 >gi|71854403|gb|AAZ52426.1| arginyl-tRNA synthetase [Streptococcus pyogenes MGAS5005] Length = 529 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 135/573 (23%), Positives = 248/573 (43%), Gaps = 88/573 (15%) Query: 50 AMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVS 108 A L++ L P IA + +I + + V G +IN +L + + ++L ++ + Sbjct: 8 AFSLAKVLRKAPQMIASELAEQID-ESQFEKVVAVGP-YINFFLDKAKISSQVLEQVITA 65 Query: 109 GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168 G +Y + G+G V I+ S N P +GH R V+GD+LA + A GY+ + ++ Sbjct: 66 GSDYAQQDEGQGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLAHIFAKMGYKPVKINHLG 125 Query: 169 DAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227 D G Q L ++ W + A+ + D LK + A+ + ++ Sbjct: 126 DWGKQFGMLIVAYKKWGDEAAVQAHPID--------ELLKLYVRINAEAETDPTVDEEAR 177 Query: 228 KWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLA 281 +W ++D +A + + RD+ L N +D D + G+ + +++D L Sbjct: 178 EWFRKLEDGDKEATELWQWFRDESLLEFNRLYDQLHVTFDSYNGEAFYNDKMDEVLDLLE 237 Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLA 339 + + E SK Q ++++ ++ P L KSDG+ Y DLA Sbjct: 238 AKNLLVE-------SKGAQVVNLEKY-----------GIEHPALIKKSDGATLYITRDLA 279 Query: 340 ---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV-----------------------AAA 373 Y K Y+ F +YV+G++ + + K+L+AV A Sbjct: 280 AALYRKRTYD--FAKSVYVVGNEQAAHFKQLKAVLKEMGYDWSDDMTHVAFGLVTKGGAK 337 Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433 +S +K + +LL V + ++ + + V VG +++F L Sbjct: 338 LSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKEAVAHAVGVGAIKFYDLKTDRMN 396 Query: 434 LLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492 DFD V + + P YVQYA+AR +SI R+A F + S D Sbjct: 397 GYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAD----------FTPSATTTYSLAD 444 Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552 ++I + ++PR+I+ + EP +A + +LA F+ +++H R + N+ Sbjct: 445 AESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQSFNKYYAH------TRILDDNS 498 Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL L +A A+++ L ++GV++PNEM Sbjct: 499 ERDN--RLALCYATATVLKEALRLLGVDAPNEM 529 >gi|51596355|ref|YP_070546.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953] gi|81639440|sp|Q66AV1|SYR_YERPS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|51589637|emb|CAH21267.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953] Length = 576 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 138/594 (23%), Positives = 240/594 (40%), Gaps = 105/594 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE +V + + + IAG GFIN++L + Sbjct: 37 GDYQANGVMAVAKKLGMQPRQLAERVVELLDLTGIASKIEIAGPGFINIFLDRQW----- 91 Query: 103 SSIVVSGIEYGRNLIGKGT------KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 V +EY G + +++ + N MHVGH R ++GD +AF Sbjct: 92 ---VAEKVEYALTAPKLGVAPVEPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAF 148 Query: 157 SGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPE 198 G+ V R ++ D G Q L L +F YQQA D D Sbjct: 149 LGHNVIRANHVGDWGTQFGMLIAYLEKMQNENASDMGLSDLELF--YQQAKKTYDEDEEF 206 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y+ V + D+Y ++ W +V D ++ A ++ D L + + D Sbjct: 207 ALRARAYV--VKLQSGDEYCRQM-------WRKLV-DITM-AQNQVAYDRLN-VTLTKDD 254 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + E ++ P +I+ +L +G E + T D + + G+ Sbjct: 255 VMGESLYNAMLP----EIVADLKAKGLAVE-----SEGATVVYLDEYKNK-------DGE 298 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370 + + K DG Y Y D+A K +YE G D ++Y + S + V++ V Sbjct: 299 PMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRILYYIDSRQHQHLMQAWTIVRKAGYV 358 Query: 371 AAAVSEKKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LR 411 +V + ++L + + + R G +K+S +RAG I L+ Sbjct: 359 PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLDEAVERAGKLIAEKNPDMPADELK 418 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 V++ VG +V++ L + + FD+ + N Y+QYAY R S+FR+A Sbjct: 419 QVINAVGIGAVKYADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSVFRRAGVD 477 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 L L VI ++ E L L ++ +I P+ + YLYDLA + Sbjct: 478 ETSLTLPL----VITEDRE-----AALATRLLQFEEIITTVAREGTPHVMCSYLYDLAGL 528 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + H + + A + ++ RL+L A + GL+ +G+++ M Sbjct: 529 FSSFYEH------CQILNAESEEIRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 576 >gi|261821364|ref|YP_003259470.1| arginyl-tRNA synthetase [Pectobacterium wasabiae WPP163] gi|261605377|gb|ACX87863.1| arginyl-tRNA synthetase [Pectobacterium wasabiae WPP163] Length = 576 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 141/612 (23%), Positives = 238/612 (38%), Gaps = 123/612 (20%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 I + G N M +++ LG+ P +AE +V + ++ + IAG GFIN++L Sbjct: 28 IRQSAKAQFGDYQANGVMAVAKKLGMPPRQLAEKVVQLLALEGIAEKTEIAGPGFINIFL 87 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKG------TKVNIEFVSANPTGPMHVGHCRCAVVG 147 + V S +E N G + I++ + N MHVGH R ++G Sbjct: 88 DKQW--------VASQVENALNAPKLGLTPVEPQTIVIDYSAPNVAKEMHVGHLRSTIIG 139 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQAL 189 D A +AF G++V R ++ D G Q L L F+R + Sbjct: 140 DAAARTLAFLGHDVIRANHVGDWGTQFGMLIAYLEKMQNESANEMDLSDLEAFYREAKKH 199 Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249 Y+ D+D E G +K G D+Y ++ W +V Q + R L Sbjct: 200 YDEDADFAE-RARGYVVKLQG---GDEYCRQM-------WRKLVDITMTQNQINYER--L 246 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 + D+ + E ++ P I+ +L +G E S+ +D + Sbjct: 247 NVTLTKQDV-MGESLYNNMLPG----IVADLKAKGLAVE-------SEGATVVFLDEYK- 293 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY----- 363 G+ + + K DG Y Y D+A K +YE D ++Y + S + Sbjct: 294 ----NKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLNADRVLYYIDSRQHQHLMQAW 349 Query: 364 --VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 V++ V +VS + ++L +DG P K RAG I L ++DE + Sbjct: 350 TIVRKAGYVPDSVSLEHHMFGMMLG------KDGKPFKT--RAGGTIKLSELLDEAYDRA 401 Query: 422 VRFMMLWRKN-----------SELLDFDFCKVKEQSKE-----------------NPVFY 453 ++ ++ KN ++++ K + SK N Y Sbjct: 402 LK--LIADKNPQMESDELAALAKVVSIGAIKYADLSKSRTTDYVFDWDNMLAFEGNTAPY 459 Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513 +QYAY R SIF++A + D + + D E L L ++ I + Sbjct: 460 MQYAYTRVASIFKRA-----GIQEDTLTQPITLS----DEREFALATRLLQFEETITSVA 510 Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573 P+ + YLYDLA +F G + H + A + RL+L A + G Sbjct: 511 REGTPHVMCSYLYDLAGLFSGFYEH------CPILNAETDDVRQSRLRLALLTAKTLKQG 564 Query: 574 LNIIGVESPNEM 585 L+ +G+E+ +M Sbjct: 565 LDTLGIETVEKM 576 >gi|332071346|gb|EGI81840.1| arginyl-tRNA synthetase [Streptococcus pneumoniae GA41301] Length = 563 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 141/595 (23%), Positives = 248/595 (41%), Gaps = 99/595 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G ++ A + + AEL K++ +A ++N + Sbjct: 26 LLETPKNSEMGDIAFPAFSLAKVERKAPQMIAAELAE---KMNSQAFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + ++L ++ Y IGK V I+ S N P +GH R V+GD+L+ Sbjct: 83 LDKSTISAQVLQTVTTEKEHYADQNIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + GY+ + ++ D G Q L ++ W ++A+ + D LK Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194 Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267 + A+ + L+ +W ++ D A+ + RD+ L N ++ E D + Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELKVEFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + ++D L+ +G + E S+ Q ++++ ++ P Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLLE-------SEGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L KSDG+ Y DLA Y K +Y+ F IYV+G + S + K+L+AV + + Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 ++ + ++G K+S R G+ I L V E Sbjct: 355 D-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAVSRAKVQIEAKNPELENKDQVA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +++F L + DFD V + + P YVQYAYAR +SI R+A Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD---- 465 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 F S DT ++I + ++PR+I A EP +A + LA F+ Sbjct: 466 ------FKPETAGNYSLNDTESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQSFN 519 Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R E+P RL L +A A ++ L ++GVE+P +M Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563 >gi|149726104|ref|XP_001503321.1| PREDICTED: arginyl-tRNA synthetase [Equus caballus] Length = 658 Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 138/584 (23%), Positives = 256/584 (43%), Gaps = 75/584 (12%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S+ L ++P IAE I + + ++ V IAG GFIN++L + Sbjct: 109 GDYQCNSAMGISQMLKSKEQKVNPREIAENITKHLPGNECIEKVEIAGPGFINVHLRKDF 168 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + L+S++V+G++ +G+ KV ++F S N MHVGH R ++G+++ L F+ Sbjct: 169 VSEQLTSLLVNGVQLP--ALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFA 226 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215 GY+V R ++ D G Q L + ++ L + DL + +Y + +E Sbjct: 227 GYDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFK 285 Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SP 272 K + + + + K I K + + + + R + + DI + E RG+ Sbjct: 286 KRAYQCVVLLQSKNPDITKAWKL--ICDVSRQEFNKIYDALDISLIE----RGESFYQDR 339 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + DI+ +G+V + D D ++++F + G + ++KSDG YT Sbjct: 340 MNDIVKEFEDRGFV--------------QVD-DGRKIVF---VPGCSIPLTIVKSDGGYT 381 Query: 333 YFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV----------------- 374 Y +DLA K + +E D +IYV+ + S +++ + A A + Sbjct: 382 YDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHLQTIFAAAQMIGWYDPKVTRVSHAGFGV 441 Query: 375 --SEKKAQINVLLCELVR---LYRDGMPIKMSK---RAGDFI----TLRHVVDEVGSDSV 422 E K + E VR L +G+ M K + D + L+ V + Sbjct: 442 VLGEDKKKFKTRSGETVRLIDLLEEGLKRSMDKLREKERDKVLTAEELKAAQTSVAYGCI 501 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 ++ L F F K+ + + N Y+ YA+ R RSI R A ++D ++ + Sbjct: 502 KYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEEMLQK 555 Query: 483 NVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + D E +L + +P +++ + L Y+Y+LA+ F + Sbjct: 556 AARETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYC 615 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R K+ M R+ L AVA+++ G +I+G++ M Sbjct: 616 VEKDRQT-GKVLKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 658 >gi|332822646|ref|XP_518086.3| PREDICTED: arginyl-tRNA synthetase, cytoplasmic [Pan troglodytes] Length = 660 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 141/598 (23%), Positives = 255/598 (42%), Gaps = 103/598 (17%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S+ L ++P IAE I + + ++ V IAG GFIN++L + Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDF 170 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + L+S++V+G++ +G+ KV ++F S N MHVGH R ++G++++ L F+ Sbjct: 171 VSEQLTSLLVNGVQLP--ALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFA 228 Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198 GY+V R ++ D G Q L L VF++ + ++ + + + Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKK 288 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y V L GK N K ++ D S Q + KI AL++ + Sbjct: 289 RAYQCVVLLQ-GK-----------NPDITKAWKLICDVSRQELNKI----YDALDVS--L 330 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + F++ + DI+ +G+V + D D ++++F + G Sbjct: 331 IERGESFYQ---DRMNDIVKEFEDRGFV--------------QVD-DGRKIVF---VPGC 369 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV--- 374 + ++KSDG YTY +DLA K + +E D +IYV+ + S + + + A A + Sbjct: 370 SIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHFQTIFAAAQMIGWY 429 Query: 375 ----------------SEKKAQINVLLCELVRLYR---DGMPIKMSK---RAGDFI---- 408 E K + E VRL +G+ M K + D + Sbjct: 430 DPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSMDKLKEKERDKVLTAE 489 Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 L V +++ L F F K+ + + N Y+ YA+ R RSI R A Sbjct: 490 ELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA 548 Query: 469 KDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 ++D ++ + + D E +L + +P +++ + L Y+Y+ Sbjct: 549 -----NIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYE 603 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA+ F + + R K+ M R+ L AVA+++ G +I+G++ M Sbjct: 604 LATTFTEFYDSCYCVEKDRQT-GKILKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660 >gi|149023774|ref|ZP_01836235.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72] gi|147929570|gb|EDK80563.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72] Length = 563 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 141/595 (23%), Positives = 248/595 (41%), Gaps = 99/595 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G ++ A + + AEL K++ +A ++N + Sbjct: 26 LLETPKNSEMGDIAFPAFSLAKVERKAPQMIAAELAE---KMNSQAFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + ++L ++ Y IGK V I+ S N P +GH R V+GD+L+ Sbjct: 83 LDKSAISAQVLQAVTTEKEHYADQNIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + GY+ + ++ D G Q L ++ W ++A+ + D LK Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAIKAHPID--------ELLKLYV 194 Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267 + A+ + L+ +W ++ D A+ + RD+ L N ++ E D + Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELKVEFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + ++D L+ +G + E S+ Q ++++ ++ P Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLLE-------SEGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L KSDG+ Y DLA Y K +Y+ F IYV+G + S + K+L+AV + + Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 ++ + ++G K+S R G+ I L V E Sbjct: 355 D-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAVSRAKVQIEAKNPELENKDQVA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +++F L + DFD V + + P YVQYAYAR +SI R+A Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD---- 465 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 F S DT ++I + ++PR+I A EP +A + LA F+ Sbjct: 466 ------FKPETAGNYSLNDTESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQSFN 519 Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R E+P RL L +A A ++ L ++GVE+P +M Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563 >gi|257482926|ref|ZP_05636967.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 578 Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 139/602 (23%), Positives = 248/602 (41%), Gaps = 101/602 (16%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE ++A + D V V IAG GF+N Sbjct: 30 IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + + ++ G +V ++ + N MHVGH R ++GD +A Sbjct: 90 FQN-TAALAARLDAALADAHLSVRKAGAVQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ F G V R+ ++ D G Q L + + + A + SDL E +Y Sbjct: 149 NVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263 A + E F E +VK + A + K +++ H ++ ++ Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLALWTRFKDISLSHCQETYERLNVKLTPA 255 Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 D G+ + + +++++L G + E S Q ++ FR+ DD Sbjct: 256 DVM-GESAYNDDLANVVNDLKATGLLVE-------SNGAQCVFLEE----FRT---ADDT 300 Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374 P++ K+ G Y Y DLA ++ K + D ++Y + + + +++ VA A Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKA-DRVLYFVDQRQALHFQQVFEVARRAGF 359 Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410 Q+ + + RDG +K+ +RA + L Sbjct: 360 VHDGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEVEL 419 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKL-- 476 Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 FD ++ PQE E L LA++ + N P+ L YLYD Sbjct: 477 ---GTPFDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYD 526 Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 LA +F + + G ENP + RL+L + GL+++G+E+ Sbjct: 527 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 576 Query: 584 EM 585 M Sbjct: 577 RM 578 >gi|169833567|ref|YP_001695442.1| arginyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6] gi|229558812|sp|B1I9E7|SYR_STRPI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|168996069|gb|ACA36681.1| arginyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6] Length = 563 Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 141/595 (23%), Positives = 248/595 (41%), Gaps = 99/595 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G ++ A + + AEL K++ +A ++N + Sbjct: 26 LLETPKNSEMGDIAFPAFSLAKVERKAPQMIAAELAE---KMNSQAFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + ++L ++ Y IGK V I+ S N P +GH R V+GD+L+ Sbjct: 83 LDKSTISAQVLQAVTTEKEHYADQNIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + GY+ + ++ D G Q L ++ W ++A+ + D LK Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194 Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267 + A+ + L+ +W ++ D A+ + RD+ L N ++ E D + Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELKVEFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + ++D L+ +G + E S+ Q ++++ ++ P Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLLE-------SEGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L KSDG+ Y DLA Y K +Y+ F IYV+G + S + K+L+AV + + Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 ++ + ++G K+S R G+ I L V E Sbjct: 355 D-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAVSRAKVQIEAKNPELENKDQVA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +++F L + DFD V + + P YVQYAYAR +SI R+A Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD---- 465 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 F S DT ++I + ++PR+I A EP +A + LA F+ Sbjct: 466 ------FKPETAGNYSLNDTESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQSFN 519 Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R E+P RL L +A A ++ L ++GVE+P +M Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563 >gi|297621921|ref|YP_003710058.1| Arginyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044] gi|297377222|gb|ADI39052.1| Arginyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044] Length = 576 Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 149/599 (24%), Positives = 243/599 (40%), Gaps = 94/599 (15%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I I + + GH N AM L++ L + P IA+ IV + ++ + IAG GFIN+ Sbjct: 27 IDIAQSKQEKFGHYQCNTAMRLTKQLHMPPREIAQRIVESVDKGDAIEKLEIAGPGFINI 86 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +LSP+Y+ K + ++ S L K KV +EF S N +HVGH R ++GD LA Sbjct: 87 FLSPAYIEKKVQTMAASP-RLDIALPEKTEKVIVEFSSPNTAKELHVGHLRSTIIGDCLA 145 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVG 210 + F G++V R ++ D G L + + + L ++DLP Sbjct: 146 RVFEFLGHDVLRLNHVGDWGTAFGMLIAYLKLSHPEILTGEEETDLP------------- 192 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 L Y + F E+ + V ++ D LKA I +I R Sbjct: 193 -HLVSWYKASKKQFDEDPGFKKISQLEVVSLQGGESDSLKAWEIICEI-------SRRSY 244 Query: 271 SPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDMDRKQLL-----FRSTMVGDDVDR-- 322 I +++D + +G Y + P + ++D+K+L+ + + + +R Sbjct: 245 QEIYNLLDVAIEERGESYYNPVLPELIE-----ELDQKELIEISEGAKCIFIPEFCNREG 299 Query: 323 ---PLL--KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV---AAA 373 PL+ KSDG + Y D+A K + E D +I V + + + K + A A Sbjct: 300 SPMPLMVQKSDGGFGYDTTDMAAMKQRVQEEKADRIIIVTDAGQALHFKLVYAASVKAGY 359 Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR---- 429 + K + + + LV L DG K R+G+ L ++ D R +M R Sbjct: 360 LDPDKVRFDHVTFGLV-LGADGK--KFRTRSGEVERLIDLI-YTAIDKAREIMAERNPDM 415 Query: 430 ------KNSELLDFDFCKVKEQS-----------------KENPVFYVQYAYARCRSIFR 466 K + L K + S + N ++ YAY R I R Sbjct: 416 PQEQREKIARALGIGAIKYADLSCHRTGDYTFSYDRMLRFEGNTAAFLMYAYVRIAGIKR 475 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 + D D + S SE+ L +HLA++ ++ P +L+ YLY Sbjct: 476 KI-----GADIDALQAAI----SLKHPSEMALGLHLAQFNEALQQVAEDLLPNRLSDYLY 526 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA F+ + R Q RL L A A I+ GL+++GVE+ +M Sbjct: 527 TLAEKFNAFY---------RDCQVEGAPEQNSRLLLCEATARILKQGLHLLGVETVEKM 576 >gi|119581911|gb|EAW61507.1| arginyl-tRNA synthetase [Homo sapiens] Length = 660 Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 141/598 (23%), Positives = 255/598 (42%), Gaps = 103/598 (17%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S+ L ++P IAE I + + ++ V IAG GFIN++L + Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDF 170 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + L+S++V+G++ +G+ KV ++F S N MHVGH R ++G++++ L F+ Sbjct: 171 VSEQLTSLLVNGVQLP--ALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFA 228 Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198 GY+V R ++ D G Q L L VF++ + ++ + + + Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKK 288 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y V L GK N K ++ D S Q + KI AL++ + Sbjct: 289 RAYQCVVLLQ-GK-----------NPDITKAWKLICDVSRQELNKI----YDALDVS--L 330 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + F++ + DI+ +G+V + D D ++++F + G Sbjct: 331 IERGESFYQ---DRMNDIVKEFEDRGFV--------------QVD-DGRKIVF---VPGC 369 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV--- 374 + ++KSDG YTY +DLA K + +E D +IYV+ + S + + + A A + Sbjct: 370 SIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHFQTIFAAAQMIGWY 429 Query: 375 ----------------SEKKAQINVLLCELVRLYR---DGMPIKMSK---RAGDFI---- 408 E K + E VRL +G+ M K + D + Sbjct: 430 DPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSMDKLKEKERDKVLTAE 489 Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 L V +++ L F F K+ + + N Y+ YA+ R RSI R A Sbjct: 490 ELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA 548 Query: 469 KDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 ++D ++ + + D E +L + +P +++ + L Y+Y+ Sbjct: 549 -----NIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYE 603 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA+ F + + R K+ M R+ L AVA+++ G +I+G++ M Sbjct: 604 LATAFTEFYDSCYCVEKDRQT-GKILKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660 >gi|71895355|ref|NP_001025778.1| arginyl-tRNA synthetase, cytoplasmic [Gallus gallus] gi|82082785|sp|Q5ZM11|SYRC_CHICK RecName: Full=Arginyl-tRNA synthetase, cytoplasmic; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|53127806|emb|CAG31232.1| hypothetical protein RCJMB04_3h11 [Gallus gallus] Length = 661 Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 138/597 (23%), Positives = 258/597 (43%), Gaps = 78/597 (13%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPL------GLDPLTIAELIVARIKIDPDVDSVFIAG 85 +V+ + G N+AM +++ L + P IAE I I + ++ V IAG Sbjct: 100 LVVTPSQQPKFGDYQCNSAMGITQILLKTKEQKVSPREIAEKITKHIPANECIEKVEIAG 159 Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 GFIN++L ++ K LSS++V+G++ IGK KV ++F S N MHVGH R + Sbjct: 160 PGFINVHLRKDFVSKQLSSLLVNGVQ--PPAIGKRKKVILDFSSPNIAKEMHVGHLRSTI 217 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPG 203 +G+++ L F+GY+V R ++ D G Q L + R+ L + DL + +Y Sbjct: 218 IGESMCRLFEFAGYDVLRLNHLGDWGTQFGMLIAHLQDRFPDYLTVSPPIGDL-QAFYKE 276 Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 + +E K + + + + K +K + + + + R + + + D+ ++E Sbjct: 277 SKRRFDTEEEFKKRAYQCVVLLQSKDPDFIKAWEL--ICDVSRKEFQKIYNCLDVTLTE- 333 Query: 264 DFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 RG+ ++DI+ +G+V + D D ++++F + G V Sbjct: 334 ---RGESFYQDMMKDIVKEFEDKGFV--------------QVD-DGRKIVF---VPGFSV 372 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKY--ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378 ++KSDG YTY +DLA + + E+G D +IYV+ S S +++ + A + Sbjct: 373 PLTIMKSDGGYTYDTSDLAALRHRLLEEKG-DILIYVVDSGQSVHLQTVFAAGQMIGWYD 431 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 ++ + + K R+GD + L +++E Sbjct: 432 PKVTRITHAAFGVVLGEDKKKFKTRSGDTVRLMDLLEEGLKRAMDKLKDKERDKVLTPEE 491 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 V +++ L F F K+ + + N Y+ YA+ R R+I R A Sbjct: 492 LKAAQMSVAFGCIKYADLSHNRLNDYVFSFDKMLD-DRGNTAAYLLYAFTRIRAIARLA- 549 Query: 470 DIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 ++D + + + D E +L + +P +++ + L YLY+L Sbjct: 550 ----NIDEGMLRKAAREEVIVLDHEKEWKLGKCILRFPEILQKILDDLLLHTLCDYLYEL 605 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A+ F + + + R K+ RL L A A+I+ G +I+G++ M Sbjct: 606 ATTFTEFYDNCYCVEKDR-QSGQIMKVNTWRLLLCEATATIMAKGFDILGIKPVERM 661 >gi|53734470|gb|AAH83505.1| Arginyl-tRNA synthetase [Danio rerio] Length = 661 Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 148/584 (25%), Positives = 252/584 (43%), Gaps = 75/584 (12%) Query: 43 GHLSTNAAMILS-----RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S + L + P IAE IV I + ++ IAG GFIN++L ++ Sbjct: 112 GDYQCNSAMAMSQMMKAKGLKVSPREIAEKIVQNIPNNDLIEKTEIAGPGFINVHLKRNF 171 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + K+LS+++V+G++ + K KV ++F S N MHVGH R ++GD++ L F Sbjct: 172 VSKLLSNVLVNGVQPPP--LQKKKKVIVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFL 229 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217 GYEV R ++ D G Q L + Q N S P P L+ KE ++ Sbjct: 230 GYEVLRLNHVGDWGTQFGMLIAHL----QDKFPNYLSVSP----PIGDLQAFYKESKKRF 281 Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277 + F + + +VK S +A D +KA N+ D +S +F + + + + Sbjct: 282 DED-EEFKKRAYKCVVKLQSKEA------DFIKAWNLICD--VSRKEFQK-----VYNCL 327 Query: 278 D-NLARQGYVY-----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 D ++ +G Y ++ + K + D RK ++F G + ++KSDG Y Sbjct: 328 DISIKERGESYYQDMMTAVVKEFEEKGLVEVDEGRK-IVFAP---GQSIPLTIVKSDGGY 383 Query: 332 TYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE--------KKAQIN 382 TY +DLA + + ++ D +IYV S + + + + A A + + A Sbjct: 384 TYDTSDLAAIRNRLFDEKADIIIYVTDSGQAMHFQVIFAAAQLIGWYDPKVTRVEHAGFG 443 Query: 383 VLLCE--------------LVRLYRDGMPIKMSK---RAGDFI----TLRHVVDEVGSDS 421 V+L E L+ L +G+ M K + D + L V Sbjct: 444 VVLGEDKKKFKTRSGDTVRLMDLLEEGLKRSMDKLKEKERDKVLTPEELEKAQQAVAFGC 503 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 +++ L F F K+ + + N Y+ YA+ R RSI R A L Sbjct: 504 IKYADLSHNRINDYVFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLANIQEAALRKAAET 562 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 +VI + E +L + +P +++ T + L YLY+LA+ F + Sbjct: 563 TDVILDHEK----EWKLGKCILRFPEILQKITDDLLLHTLCDYLYELATTFTEFYDSCYC 618 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R K+ M R+ L A A+++ G +I+G+ M Sbjct: 619 VEKDRQT-GEVVKVNMWRMLLCEATAAVMAKGFDILGINPVQRM 661 >gi|15149476|ref|NP_002878.2| arginyl-tRNA synthetase, cytoplasmic [Homo sapiens] gi|20178331|sp|P54136|SYRC_HUMAN RecName: Full=Arginyl-tRNA synthetase, cytoplasmic; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|12653513|gb|AAH00528.1| Arginyl-tRNA synthetase [Homo sapiens] gi|15779108|gb|AAH14619.1| Arginyl-tRNA synthetase [Homo sapiens] gi|30583627|gb|AAP36058.1| arginyl-tRNA synthetase [Homo sapiens] gi|61359156|gb|AAX41676.1| arginyl-tRNA synthetase [synthetic construct] Length = 660 Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 141/598 (23%), Positives = 255/598 (42%), Gaps = 103/598 (17%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S+ L ++P IAE I + + ++ V IAG GFIN++L + Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDF 170 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + L+S++V+G++ +G+ KV ++F S N MHVGH R ++G++++ L F+ Sbjct: 171 VSEQLTSLLVNGVQLP--ALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFA 228 Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198 GY+V R ++ D G Q L L VF++ + ++ + + + Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKK 288 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y V L GK N K ++ D S Q + KI AL++ + Sbjct: 289 RAYQCVVLLQ-GK-----------NPDITKAWKLICDVSRQELNKI----YDALDVS--L 330 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + F++ + DI+ +G+V + D D ++++F + G Sbjct: 331 IERGESFYQ---DRMNDIVKEFEDRGFV--------------QVD-DGRKIVF---VPGC 369 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV--- 374 + ++KSDG YTY +DLA K + +E D +IYV+ + S + + + A A + Sbjct: 370 SIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHFQTIFAAAQMIGWY 429 Query: 375 ----------------SEKKAQINVLLCELVRLYR---DGMPIKMSK---RAGDFI---- 408 E K + E VRL +G+ M K + D + Sbjct: 430 DPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSMDKLKEKERDKVLTAE 489 Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 L V +++ L F F K+ + + N Y+ YA+ R RSI R A Sbjct: 490 ELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA 548 Query: 469 KDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 ++D ++ + + D E +L + +P +++ + L Y+Y+ Sbjct: 549 -----NIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYE 603 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA+ F + + R K+ M R+ L AVA+++ G +I+G++ M Sbjct: 604 LATAFTEFYDSCYCVEKDRQT-GKILKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660 >gi|307244036|ref|ZP_07526155.1| arginine--tRNA ligase [Peptostreptococcus stomatis DSM 17678] gi|306492560|gb|EFM64594.1| arginine--tRNA ligase [Peptostreptococcus stomatis DSM 17678] Length = 577 Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 153/621 (24%), Positives = 262/621 (42%), Gaps = 92/621 (14%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLD 60 L ADF K + EI K ++E L+ I +IE P + G + L++ Sbjct: 11 LMADF----KKLISEI-IKSEIEDLTLEEITALIEVPPNKEMGDYAF-PCFKLAKIFRKA 64 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGK 119 P IAE + +I+ D++ + G G++N +++ L +K+++ ++ YG++ GK Sbjct: 65 PNAIAEDLAGKIQPTDDINKIVNLG-GYVNFFVNKESLAKKVINQVLSEKENYGKSEFGK 123 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G V +EF S N P H+GH R V+G+ L+ + GY V + ++ D G Q L + Sbjct: 124 GKTVVVEFSSPNIAKPFHIGHVRTTVIGNALSKIYQSQGYHVEKLNHLGDYGTQFGKLIV 183 Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWLPIVKDYS 237 + W +QA+ K KEL Y + F +E + P ++D + Sbjct: 184 AYKLWGDKQAVE----------------KDPIKELLKLY----IRFHDEAEAKPEMEDEA 223 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 + K+ D +A D++ D + S + D++D + YV E Sbjct: 224 REWFTKLENGDQEA----KDLWQWFRDESLKEFSRVYDLLD-IDFDSYVGESFYSDKMPA 278 Query: 298 TTQKCDMDRKQLLFRS--TMVGDDVDRPL-----LKSDGSYTYFAADLA-YFKCKYERGF 349 + ++ K LL S M+ D D L K DGS Y DLA F K F Sbjct: 279 VIE--ELKEKNLLVESDGAMIVDLEDSKLPPALIQKRDGSTLYLTRDLASAFYRKKIYNF 336 Query: 350 DNMIYVMGSDHSGYVKRLEAV-----------------------AAAVSEKKAQINVLLC 386 D IYV+G+ + K+ + +S +K ++ V L Sbjct: 337 DKSIYVVGAQQELHFKQCFEIIKRMGYDWYKDMVHVQFGMVALEEGTMSTRKGRV-VFLE 395 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446 +++ D + ++ D + V VG +V F L NS + D+ F + S Sbjct: 396 DVLNQAIDRTRQIIEEKNPDAENIYEVAKAVGVGAVVFQEL--SNSRIKDYTFSWDRTLS 453 Query: 447 KENPVF-YVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 E YVQY +ARC ++ R+A + I D++++ D ++ L Sbjct: 454 FEGETGPYVQYTHARCCAVLRKADQPISADINYEALS----------DQDAADVLSVLET 503 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 + + I A EP+ + ++ DLA F+ + + +P L + L RL LV Sbjct: 504 FNKSIMTAMKKNEPHIVTRFVLDLAQAFNKFYHN---SPIL----VEDDDLRAARLALVE 556 Query: 565 AVASIINSGLNIIGVESPNEM 585 A I + L I+G+++P +M Sbjct: 557 ATRQTIENALKILGMKAPQKM 577 >gi|238754848|ref|ZP_04616198.1| Arginyl-tRNA synthetase [Yersinia ruckeri ATCC 29473] gi|238706859|gb|EEP99226.1| Arginyl-tRNA synthetase [Yersinia ruckeri ATCC 29473] Length = 577 Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 145/588 (24%), Positives = 245/588 (41%), Gaps = 92/588 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE +VA + ++ V IAG GFIN++L + Sbjct: 37 GDYQANGVMAVAKKLGMQPRQLAEKVVALLDLEGISSKVEIAGPGFINIFLDRQW----- 91 Query: 103 SSIVVSGIEYGRNLIGKG------TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 + +EY G V I++ + N MHVGH R ++GD A + F Sbjct: 92 ---IAEKVEYALTAPKLGIAPVEPQTVVIDYSAPNVAKQMHVGHLRSTIIGDAAARTLEF 148 Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGKELAD 215 G+ V R ++ D G Q L Y + + N N SD+ G+ V A Sbjct: 149 LGHNVIRANHVGDWGTQFGMLI-----AYLEKMQNENASDM------GLSDLEVFYREAK 197 Query: 216 KYSSELLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALN-IQHD---IFISEDDFHR 267 K+ E F +VK D +AM + + D A N I +D + +++DD Sbjct: 198 KHYDEDEAFAARARAYVVKLQGGDEYCRAMWRKLVDITMAQNQISYDRLNVTLTQDDVM- 256 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ S + I+ +L +G E S+ +D + G+ + + Sbjct: 257 GESLYNSMLPGIVADLKAKGLAVE-------SEGATVVFLDEYK-----NKDGEPMGVII 304 Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSE 376 K DG Y Y D+A K +YE G D ++Y + S + V++ V +V Sbjct: 305 QKKDGGYLYTTTDIACAKYRYETLGADRVLYYIDSRQHQHLMQAWTIVRKAGYVPESVPL 364 Query: 377 KKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LRHVVDEV 417 + ++L + + + R G +++S +RAG I L VV+ V Sbjct: 365 EHHMFGMMLGKDGKPFKTRSGGTVRLSDLLDEAIERAGKLIAEKNPDMPANELAEVVNAV 424 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G +V++ L + + FD+ + N Y+QYAY R S+F++A + D Sbjct: 425 GIGAVKYADLSKSRTTDYVFDWDNMLALDG-NTAPYMQYAYTRVVSVFKRAGVV--DERS 481 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 P VI +E E L L ++ I N P+ + YLYD+A +F + Sbjct: 482 LTLPL-VITEE-----REAALATRLLQFEETITNVAREGTPHVMCAYLYDVAGLFSSFYE 535 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H + + A++ + RL+L A + GL+ +G+++ M Sbjct: 536 H------CQILNADSEESRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 577 >gi|149006956|ref|ZP_01830637.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74] gi|147761557|gb|EDK68522.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74] gi|332071148|gb|EGI81643.1| arginyl-tRNA synthetase [Streptococcus pneumoniae GA17545] Length = 563 Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 141/595 (23%), Positives = 251/595 (42%), Gaps = 99/595 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G ++ A + + AEL K++ +A ++N + Sbjct: 26 LLETPKNSEMGDIAFPAFSLAKVERKAPQMIAAELAE---KMNSQAFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + ++L ++ Y IGK V I+ S N P +GH R V+GD+L+ Sbjct: 83 LDKSAISAQVLQAVTTEKEHYADQNIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + GY+ + ++ D G Q L ++ W ++A+ + D LK Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194 Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267 + A+ + L+ +W ++ D A+ + RD+ L N ++ E D + Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELKVEFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + ++D L+ +G + E S+ Q ++++ ++ P Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLLE-------SEGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L KSDG+ Y DLA Y K +Y+ F IYV+G + S + K+L+AV + + Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 ++ + ++G K+S R G+ I L + E Sbjct: 355 D-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTIAEAVSRAKVQIEAKNPELENKDQVA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +++F L + DFD V + + P YVQYAYAR +SI R+A D P Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKA-DFKP 468 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 + + S DT ++I + ++PR+I A EP +A + LA F+ Sbjct: 469 ETSGNY---------SLNDTESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQSFN 519 Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R E+P RL L +A A ++ L ++GVE+P +M Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563 >gi|332161947|ref|YP_004298524.1| arginyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325666177|gb|ADZ42821.1| arginyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 576 Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 137/582 (23%), Positives = 246/582 (42%), Gaps = 81/582 (13%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + +D V IAG GFIN++L ++ + Sbjct: 37 GDYQANGVMAVAKKLGMQPRQLAEKVIELLDLDGIARKVEIAGPGFINIFLDRQWVASKV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + + G + T V +++ + N MHVGH R ++GD + F G+ V Sbjct: 97 EE-ALKAPKLGVQPVEPQTIV-VDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGKELADKYSSEL 221 R ++ D G Q L Y + + N N SD+ G+ + + A K E Sbjct: 155 RANHVGDWGTQFGMLIA-----YLEKMQNENASDM------GLSDLELFYQQAKKTYDED 203 Query: 222 LNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHD---IFISEDDFHRGDP--- 270 F + +VK +Y Q K++ + I +D + +++DD G+ Sbjct: 204 EEFAKRARAYVVKLQSGDEYCRQMWRKLVDITMAQNQISYDRLNVTLTKDDVM-GESLYN 262 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + + +I+ +L +G E + T D + + G+ + + K DG Sbjct: 263 TMLPEIVADLKAKGLAVE-----SEGATVVYLDEYKNK-------DGEPMGVIIQKKDGG 310 Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382 Y Y D+A K +YE G D ++Y + S + V++ V +V + Sbjct: 311 YLYTTTDIACAKYRYETLGADRVLYYIDSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFG 370 Query: 383 VLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LRHVVDEVGSDSVR 423 ++L + + + R G +K+S +RAG I L+ VV+ VG +V+ Sbjct: 371 MMLGKDGKPFKTRSGGTVKLSDLLDEAIERAGKLIAEKNPDMPADELKQVVEAVGIGAVK 430 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + L + + FD+ + N Y+QYAY R S+F++A +L L Sbjct: 431 YADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSVFKRAGVDESNLILPL---- 485 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 VI ++ E L L ++ VI P+ + YLYDLA +F + H Sbjct: 486 VITEDRE-----AALATRLLQFEEVITTVAREGTPHVMCSYLYDLAGLFSSFYEH----- 535 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + A++ + RL+L A + GL+ +G+++ M Sbjct: 536 -CQILNADSEESRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 576 >gi|188533617|ref|YP_001907414.1| arginyl-tRNA synthetase [Erwinia tasmaniensis Et1/99] gi|238691998|sp|B2VJB6|SYR_ERWT9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|188028659|emb|CAO96521.1| Arginyl-tRNA synthetase [Erwinia tasmaniensis Et1/99] Length = 576 Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 139/617 (22%), Positives = 236/617 (38%), Gaps = 119/617 (19%) Query: 32 IVIERPRDC----------AHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSV 81 I + P DC G N M +++ +G+ P +AE ++ ++ + V Sbjct: 16 IAVGAPADCEPQVRQSAKAQFGDYQANGMMAVAKKMGMPPRQLAEKVLEQLDLSGIAAKV 75 Query: 82 FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 IAG GFIN++L+ +L + V++ + G + T V I++ + N MHVGH Sbjct: 76 EIAGPGFINIFLAQEWLSAQIDG-VLTAPKLGVAPVAPKTVV-IDYSAPNVAKEMHVGHV 133 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA------------------LSVFW 183 R ++GD A + F G++V R ++ D G Q L L F+ Sbjct: 134 RSTIIGDAAARTLEFLGHKVIRANHVGDWGTQFGMLIAFLEKQQSEHHEAIALADLEAFY 193 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 R + Y+ D E V G E K +L++ + I +V Sbjct: 194 REAKRTYDEDPAFAERARGYVVKLQGGDEYCRKMWKQLVDVTMTQNQLIYDRMNV----T 249 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 + RDD+ ++ +D+ + I+ +L +G E S+ Sbjct: 250 LTRDDVMGESLYNDM--------------LPGIVADLKAKGLAVE-------SEGATVVF 288 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSG 362 +D + G+ + + K DG Y Y D+A K +YE D ++Y + S Sbjct: 289 LDEYK-----NKEGEPMGVIIRKKDGGYLYTTTDIACAKYRYETLKADRVLYYIDSRQHQ 343 Query: 363 Y-------VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 + V++ V ++ + ++L +DG P K RAG I L ++D Sbjct: 344 HLMQAWTIVRKAGYVPDSIPLEHHMFGMMLG------KDGKPFK--TRAGGTIKLSDLLD 395 Query: 416 E---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 E VG +V++ L + + FD+ + + Sbjct: 396 EAVDRATKLVAEKNPDMPADELNALANIVGIGAVKYADLSKSRTTDYIFDWDNML-AFEG 454 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 N Y+QYAY R S+FR+A + V D E L V L ++ Sbjct: 455 NTAPYMQYAYTRVLSVFRKA---------GIDAEAVSGVTRIVDDREAALAVRLLQFEET 505 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 I P+ + YLYDLA +F G + H + A + RL+L A Sbjct: 506 ITQVARDGMPHVMCAYLYDLAGLFSGFYEH------CPILNAEDEATKQSRLRLALLTAK 559 Query: 569 IINSGLNIIGVESPNEM 585 + GL+ +G+E+ M Sbjct: 560 TLKQGLDTLGIETVERM 576 >gi|148984375|ref|ZP_01817663.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71] gi|149011935|ref|ZP_01833083.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75] gi|168484413|ref|ZP_02709365.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00] gi|225857652|ref|YP_002739163.1| arginyl-tRNA synthetase [Streptococcus pneumoniae P1031] gi|225859835|ref|YP_002741345.1| arginyl-tRNA synthetase [Streptococcus pneumoniae 70585] gi|237650275|ref|ZP_04524527.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974] gi|237822219|ref|ZP_04598064.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2] gi|307128340|ref|YP_003880371.1| arginyl-tRNA synthetase [Streptococcus pneumoniae 670-6B] gi|254782984|sp|C1CAQ7|SYR_STRP7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|254782988|sp|C1CN25|SYR_STRZP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|147763890|gb|EDK70823.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75] gi|147923152|gb|EDK74266.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71] gi|172042367|gb|EDT50413.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00] gi|225722109|gb|ACO17963.1| arginyl-tRNA synthetase [Streptococcus pneumoniae 70585] gi|225725656|gb|ACO21508.1| arginyl-tRNA synthetase [Streptococcus pneumoniae P1031] gi|301795009|emb|CBW37473.1| arginyl-tRNA synthetase [Streptococcus pneumoniae INV104] gi|301800828|emb|CBW33483.1| arginyl-tRNA synthetase [Streptococcus pneumoniae OXC141] gi|306485402|gb|ADM92271.1| arginyl-tRNA synthetase [Streptococcus pneumoniae 670-6B] gi|332198683|gb|EGJ12765.1| arginyl-tRNA synthetase [Streptococcus pneumoniae GA47368] gi|332198891|gb|EGJ12972.1| arginyl-tRNA synthetase [Streptococcus pneumoniae GA47901] Length = 563 Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 141/595 (23%), Positives = 248/595 (41%), Gaps = 99/595 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G ++ A + + AEL K++ +A ++N + Sbjct: 26 LLETPKNSEMGDIAFPAFSLAKVERKAPQMIAAELAE---KMNSQAFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + ++L ++ Y IGK V I+ S N P +GH R V+GD+L+ Sbjct: 83 LDKSAISAQVLQAVTTEKEHYADQNIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + GY+ + ++ D G Q L ++ W ++A+ + D LK Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194 Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267 + A+ + L+ +W ++ D A+ + RD+ L N ++ E D + Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELKVEFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + ++D L+ +G + E S+ Q ++++ ++ P Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLLE-------SEGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L KSDG+ Y DLA Y K +Y+ F IYV+G + S + K+L+AV + + Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 ++ + ++G K+S R G+ I L V E Sbjct: 355 D-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAVSRAKVQIEAKNPELENKDQVA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +++F L + DFD V + + P YVQYAYAR +SI R+A Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD---- 465 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 F S DT ++I + ++PR+I A EP +A + LA F+ Sbjct: 466 ------FKPETAGNYSLNDTESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQSFN 519 Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R E+P RL L +A A ++ L ++GVE+P +M Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563 >gi|153950466|ref|YP_001401016.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758] gi|166987306|sp|A7FID8|SYR_YERP3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|152961961|gb|ABS49422.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758] Length = 576 Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 138/594 (23%), Positives = 240/594 (40%), Gaps = 105/594 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE +V + + + IAG GFIN++L + Sbjct: 37 GDYQANGVMAVAKKLGMQPRQLAERVVELLDLTGIASKIEIAGPGFINIFLDRQW----- 91 Query: 103 SSIVVSGIEYGRNLIGKGT------KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 V +EY G + +++ + N MHVGH R ++GD +AF Sbjct: 92 ---VAEKVEYALTAPKLGVAPVEPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAF 148 Query: 157 SGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPE 198 G+ V R ++ D G Q L L +F YQQA D D Sbjct: 149 LGHNVIRANHVGDWGTQFGMLIAYLEKMQNENASDMGLSDLELF--YQQAKKTYDEDEEF 206 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y+ V + D+Y ++ W +V D ++ A ++ D L + + D Sbjct: 207 ALRARAYV--VKLQSGDEYCRQM-------WRKLV-DITM-AQNQVAYDRLN-VTLTKDD 254 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + E ++ P +I+ +L +G E + T D + + G+ Sbjct: 255 VMGESLYNAMLP----EIVADLKAKGLAVE-----SEGATVVYLDEYKNK-------DGE 298 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370 + + K DG Y Y D+A K +YE G D ++Y + S + V++ V Sbjct: 299 PMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRILYYIDSRQHQHLMQAWAIVRKAGYV 358 Query: 371 AAAVSEKKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LR 411 +V + ++L + + + R G +K+S +RAG I L+ Sbjct: 359 PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLDEAVERAGKLIAEKNPDMPADELK 418 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 V++ VG +V++ L + + FD+ + N Y+QYAY R S+FR+A Sbjct: 419 QVINAVGIGAVKYADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSVFRRAGVD 477 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 L L VI ++ E L L ++ +I P+ + YLYDLA + Sbjct: 478 ENSLTLPL----VITEDRE-----AALATRLLQFEEIITTVAREGTPHVMCSYLYDLAGL 528 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + H + + A + ++ RL+L A + GL+ +G+++ M Sbjct: 529 FSSFYEH------CQILNAESEEIRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 576 >gi|194398354|ref|YP_002038668.1| arginyl-tRNA synthetase [Streptococcus pneumoniae G54] gi|229558811|sp|B5E387|SYR_STRP4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|194358021|gb|ACF56469.1| arginyl-tRNA synthetase [Streptococcus pneumoniae G54] Length = 563 Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 142/595 (23%), Positives = 250/595 (42%), Gaps = 99/595 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G ++ A L++ P IA + K++ +A ++N + Sbjct: 26 LLETPKNSEMGDIAF-PAFSLAKVERKAPQMIATELAE--KMNSQAFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + ++L ++ Y IGK V I+ S N P +GH R V+GD+L+ Sbjct: 83 LDKSAISAQVLQAVTTEKEHYADQNIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + GY+ + ++ D G Q L ++ W ++A+ + D LK Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194 Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267 + A+ + L+ +W ++ D A+ + RD+ L N ++ E D + Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELKVEFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + ++D L+ +G + E S+ Q ++++ ++ P Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLLE-------SEGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L KSDG+ Y DLA Y K +Y+ F IYV+G + S + K+L+AV + + Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 ++ + ++G K+S R G+ I L V E Sbjct: 355 D-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAVSRAKVQIEAKNPELENKDQIA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +++F L + DFD V + + P YVQYAYAR +SI R+A Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD---- 465 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 F S DT ++I + ++PR+I A EP +A + LA F+ Sbjct: 466 ------FKPETAGNYSLNDTESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQSFN 519 Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R E+P RL L +A A ++ L ++GVE+P +M Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563 >gi|22126152|ref|NP_669575.1| arginyl-tRNA synthetase [Yersinia pestis KIM 10] gi|45441691|ref|NP_993230.1| arginyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001] gi|108807424|ref|YP_651340.1| arginyl-tRNA synthetase [Yersinia pestis Antiqua] gi|145598372|ref|YP_001162448.1| arginyl-tRNA synthetase [Yersinia pestis Pestoides F] gi|149366025|ref|ZP_01888060.1| arginyl-tRNA synthetase [Yersinia pestis CA88-4125] gi|162421704|ref|YP_001606856.1| arginyl-tRNA synthetase [Yersinia pestis Angola] gi|165926439|ref|ZP_02222271.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. F1991016] gi|165938879|ref|ZP_02227433.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. IP275] gi|166009270|ref|ZP_02230168.1| arginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. E1979001] gi|166210482|ref|ZP_02236517.1| arginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. B42003004] gi|167401417|ref|ZP_02306914.1| arginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420373|ref|ZP_02312126.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424725|ref|ZP_02316478.1| arginyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|218929153|ref|YP_002347028.1| arginyl-tRNA synthetase [Yersinia pestis CO92] gi|229894757|ref|ZP_04509937.1| arginyl-tRNA synthetase [Yersinia pestis Pestoides A] gi|229897461|ref|ZP_04512617.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229898107|ref|ZP_04513256.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India 195] gi|270490849|ref|ZP_06207923.1| arginine--tRNA ligase [Yersinia pestis KIM D27] gi|294503888|ref|YP_003567950.1| arginyl-tRNA synthetase [Yersinia pestis Z176003] gi|21542252|sp|Q8ZEV7|SYR_YERPE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|123245827|sp|Q1C827|SYR_YERPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|166200588|sp|A4TJL3|SYR_YERPP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|238687249|sp|A9QYY6|SYR_YERPG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|21959114|gb|AAM85826.1|AE013829_6 arginine tRNA synthetase [Yersinia pestis KIM 10] gi|45436553|gb|AAS62107.1| arginyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001] gi|108779337|gb|ABG13395.1| arginyl-tRNA synthetase [Yersinia pestis Antiqua] gi|115347764|emb|CAL20681.1| arginyl-tRNA synthetase [Yersinia pestis CO92] gi|145210068|gb|ABP39475.1| arginyl-tRNA synthetase [Yersinia pestis Pestoides F] gi|149292438|gb|EDM42512.1| arginyl-tRNA synthetase [Yersinia pestis CA88-4125] gi|162354519|gb|ABX88467.1| arginyl-tRNA synthetase [Yersinia pestis Angola] gi|165913242|gb|EDR31865.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. IP275] gi|165921660|gb|EDR38857.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. F1991016] gi|165991825|gb|EDR44126.1| arginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. E1979001] gi|166207662|gb|EDR52142.1| arginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. B42003004] gi|166962068|gb|EDR58089.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049113|gb|EDR60521.1| arginyl-tRNA synthetase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056607|gb|EDR66376.1| arginyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229688823|gb|EEO80890.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. India 195] gi|229693798|gb|EEO83847.1| arginyl-tRNA synthetase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229702230|gb|EEO90249.1| arginyl-tRNA synthetase [Yersinia pestis Pestoides A] gi|262361993|gb|ACY58714.1| arginyl-tRNA synthetase [Yersinia pestis D106004] gi|262365870|gb|ACY62427.1| arginyl-tRNA synthetase [Yersinia pestis D182038] gi|270339353|gb|EFA50130.1| arginine--tRNA ligase [Yersinia pestis KIM D27] gi|294354347|gb|ADE64688.1| arginyl-tRNA synthetase [Yersinia pestis Z176003] Length = 576 Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 137/594 (23%), Positives = 240/594 (40%), Gaps = 105/594 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE +V + + + IAG GFIN++L + Sbjct: 37 GDYQANGVMAVAKKLGMQPRQLAERVVELLDLTGIASKIEIAGPGFINIFLDRQW----- 91 Query: 103 SSIVVSGIEYGRNLIGKGT------KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 V +EY G + +++ + N MHVGH R ++GD +AF Sbjct: 92 ---VAEKVEYALTAPKLGVAPVEPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAF 148 Query: 157 SGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPE 198 G+ V R ++ D G Q L L +F YQQA D D Sbjct: 149 LGHNVIRANHVGDWGTQFGMLIAYLEKMQNENASDMGLSDLELF--YQQAKKTYDEDEEF 206 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y+ V + D+Y ++ W +V D ++ A ++ D L + + D Sbjct: 207 ALRARAYV--VKLQSGDEYCRQM-------WRKLV-DITM-AQNQVAYDRLN-VTLTKDD 254 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + E ++ P +I+ +L +G E + T D + + G+ Sbjct: 255 VMGESLYNAMLP----EIVADLKAKGLAVE-----SEGATVVYLDEYKNK-------DGE 298 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370 + + K DG Y Y D+A K +YE G D ++Y + S + V++ V Sbjct: 299 PMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRILYYIDSRQHQHLMQAWTIVRKAGYV 358 Query: 371 AAAVSEKKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LR 411 +V + ++L + + + R G +K+S +RAG I L+ Sbjct: 359 PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLDEAVERAGKLIAEKNPDMPADELK 418 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 V++ VG +V++ L + + FD+ + N Y+QYAY R S+FR+A Sbjct: 419 QVINAVGIGAVKYADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSVFRRAGVD 477 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 L L V+ ++ E L L ++ +I P+ + YLYDLA + Sbjct: 478 ETSLTLPL----VVTEDRE-----ATLATRLLQFEEIITTVAREGTPHVMCSYLYDLAGL 528 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + H + + A + ++ RL+L A + GL+ +G+++ M Sbjct: 529 FSSFYEH------CQILNAESEEIRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 576 >gi|318605975|emb|CBY27473.1| arginyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica Y11] Length = 576 Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 140/584 (23%), Positives = 251/584 (42%), Gaps = 85/584 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + +D V IAG GFIN++L ++ + Sbjct: 37 GDYQANGVMAVAKKLGMQPRQLAEKVIELLDLDGIARKVEIAGPGFINIFLDRQWVASKV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + + G + T V +++ + N MHVGH R ++GD + F G+ V Sbjct: 97 EE-ALKAPKLGVQPVEPQTIV-VDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGKELADKYSSEL 221 R ++ D G Q L Y + + N N SD+ G+ + + A K E Sbjct: 155 RANHVGDWGTQFGMLI-----AYLEKMQNENASDM------GLSDLELFYQQAKKTYDED 203 Query: 222 LNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHD---IFISEDDFHRGDP--- 270 F + +VK +Y Q K++ + I +D + +++DD G+ Sbjct: 204 EEFAKRARAYVVKLQSGDEYCRQMWRKLVDITMAQNQISYDRLNVTLTKDDVM-GESLYN 262 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + + +I+ +L +G E + T D + + G+ + + K DG Sbjct: 263 TMLPEIVADLKAKGLAVE-----SEGATVVYLDEYKNK-------DGEPMGVIIQKKDGG 310 Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382 Y Y D+A K +YE G D ++Y + S + V++ V +V + Sbjct: 311 YLYTTTDIACAKYRYETLGADRVLYYIDSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFG 370 Query: 383 VLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LRHVVDEVGSDSVR 423 ++L + + + R G +K+S +RAG I L+ VV+ VG +V+ Sbjct: 371 MMLGKDGKPFKTRSGGTVKLSDLLDEAIERAGKLIAEKNPDMPADELKQVVEAVGIGAVK 430 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + L + + FD+ + N Y+QYAY R S+F++A +L L Sbjct: 431 YADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSVFKRAGVDESNLILPL---- 485 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQE--PYKLAFYLYDLASVFHGHWSHGRE 541 VI ++ E L L ++ VI T+A+E P+ + YLYDLA +F + H Sbjct: 486 VITEDRE-----AALATRLLQFEEVI--TTVAREGIPHVMCSYLYDLAGLFSSFYEH--- 535 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + A++ + RL+L A + GL+ +G+++ M Sbjct: 536 ---CQILNADSEESRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 576 >gi|290508794|ref|ZP_06548165.1| arginyl-tRNA synthetase [Klebsiella sp. 1_1_55] gi|289778188|gb|EFD86185.1| arginyl-tRNA synthetase [Klebsiella sp. 1_1_55] Length = 577 Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 138/590 (23%), Positives = 246/590 (41%), Gaps = 96/590 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE +++ + ++ + V IAG GFIN++L P++ L Sbjct: 37 GDYQANGVMAVAKKLGMAPRQLAEQVLSHLDLNGIANKVEIAGPGFINIFLDPAF----L 92 Query: 103 SSIVVSGIEYGRNLIGK--GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + V ++ R + K + +++ + N MHVGH R ++GD + F G++ Sbjct: 93 ADNVNRALQSERLGVTKPQAQTIVVDYSAPNVAKEMHVGHLRSTIIGDASVRTLEFLGHK 152 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 V R ++ D G Q L ++ + QQ N S++ G Y + A K+ E Sbjct: 153 VIRANHVGDWGTQFGML-IAYLEKQQQ---ENASEMALADLEGFYRE------AKKHYDE 202 Query: 221 LLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPI 273 F E +VK Y +Q K++ DI +S++ + R + + Sbjct: 203 DEAFAERARSYVVKLQGGDQYFLQMWRKLV-----------DITMSQNQITYDRLNVTLT 251 Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF---RSTMVGDDVDRPLLKSDGS 330 RD + + + GI+ K+K + + ++F G+ + + K DG Sbjct: 252 RDDVMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEYKNKEGEPMGVIIQKKDGG 310 Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382 Y Y D+A K +YE D ++Y + S + V++ V +V + Sbjct: 311 YLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFG 370 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416 ++L +DG P K RAG + L ++DE Sbjct: 371 MMLG------KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMSADELENLAK 422 Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 VG +V++ L + + FD+ + + N Y+QYAY R S+FR+A D Sbjct: 423 VVGIGAVKYADLSKNRTTDYVFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKAG---IDE 478 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + + VI ++ E QL L ++ + P+ + YLYDLA +F G Sbjct: 479 NAMIDAPVVIAED-----REAQLAARLLQFEETLSVVAREGTPHVMCAYLYDLAGLFSGF 533 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + H + A + + RL+L A + GL+ +G+E+ M Sbjct: 534 YEH------CPILSAESEETRNSRLKLALLTAKTLKLGLDTLGIETVERM 577 >gi|15903931|ref|NP_359481.1| arginyl-tRNA synthetase [Streptococcus pneumoniae R6] gi|116516539|ref|YP_817294.1| arginyl-tRNA synthetase [Streptococcus pneumoniae D39] gi|148989896|ref|ZP_01821179.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73] gi|148992079|ref|ZP_01821853.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68] gi|168486894|ref|ZP_02711402.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00] gi|168489140|ref|ZP_02713339.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP195] gi|168491605|ref|ZP_02715748.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04] gi|168494168|ref|ZP_02718311.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06] gi|221232790|ref|YP_002511944.1| arginyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669] gi|225855567|ref|YP_002737079.1| arginyl-tRNA synthetase [Streptococcus pneumoniae JJA] gi|38372520|sp|Q8DN69|SYR_STRR6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|122277860|sp|Q04I94|SYR_STRP2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|254782985|sp|B8ZPK2|SYR_STRPJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|254782987|sp|C1CH08|SYR_STRZJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|15459583|gb|AAL00692.1| Arginyl-tRNA synthetase(arginine--tRNA ligase) (ARGRS) [Streptococcus pneumoniae R6] gi|116077115|gb|ABJ54835.1| arginyl-tRNA synthetase [Streptococcus pneumoniae D39] gi|147924681|gb|EDK75766.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73] gi|147929128|gb|EDK80139.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68] gi|183570152|gb|EDT90680.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00] gi|183572255|gb|EDT92783.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP195] gi|183574045|gb|EDT94573.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04] gi|183575862|gb|EDT96390.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06] gi|220675252|emb|CAR69843.1| arginyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669] gi|225723848|gb|ACO19701.1| arginyl-tRNA synthetase [Streptococcus pneumoniae JJA] gi|332071512|gb|EGI82005.1| arginyl-tRNA synthetase [Streptococcus pneumoniae GA17570] gi|332198499|gb|EGJ12582.1| arginyl-tRNA synthetase [Streptococcus pneumoniae GA41317] Length = 563 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 141/595 (23%), Positives = 248/595 (41%), Gaps = 99/595 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G ++ A + + AEL K++ +A ++N + Sbjct: 26 LLETPKNSEMGDIAFPAFSLAKVERKAPQMIAAELAE---KMNSQAFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + ++L ++ Y IGK V I+ S N P +GH R V+GD+L+ Sbjct: 83 LDKSAISAQVLQAVTTEKEHYADQNIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + GY+ + ++ D G Q L ++ W ++A+ + D LK Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194 Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267 + A+ + L+ +W ++ D A+ + RD+ L N ++ E D + Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELKVEFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + ++D L+ +G + E S+ Q ++++ ++ P Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLLE-------SEGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L KSDG+ Y DLA Y K +Y+ F IYV+G + S + K+L+AV + + Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 ++ + ++G K+S R G+ I L V E Sbjct: 355 D-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAVSRAKVQIEAKNPELENKDQVA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +++F L + DFD V + + P YVQYAYAR +SI R+A Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD---- 465 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 F S DT ++I + ++PR+I A EP +A + LA F+ Sbjct: 466 ------FKPETAGNYSLNDTESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQSFN 519 Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R E+P RL L +A A ++ L ++GVE+P +M Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563 >gi|182685015|ref|YP_001836762.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CGSP14] gi|303254068|ref|ZP_07340184.1| arginyl-tRNA synthetase [Streptococcus pneumoniae BS455] gi|303259580|ref|ZP_07345556.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293] gi|303262025|ref|ZP_07347970.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292] gi|303264481|ref|ZP_07350400.1| arginyl-tRNA synthetase [Streptococcus pneumoniae BS397] gi|303267396|ref|ZP_07353252.1| arginyl-tRNA synthetase [Streptococcus pneumoniae BS457] gi|303269755|ref|ZP_07355506.1| arginyl-tRNA synthetase [Streptococcus pneumoniae BS458] gi|229558813|sp|B2IMZ8|SYR_STRPS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|182630349|gb|ACB91297.1| arginyl-tRNA synthetase [Streptococcus pneumoniae CGSP14] gi|301802752|emb|CBW35524.1| arginyl-tRNA synthetase [Streptococcus pneumoniae INV200] gi|302598978|gb|EFL66008.1| arginyl-tRNA synthetase [Streptococcus pneumoniae BS455] gi|302636665|gb|EFL67155.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292] gi|302639132|gb|EFL69591.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293] gi|302640702|gb|EFL71098.1| arginyl-tRNA synthetase [Streptococcus pneumoniae BS458] gi|302643061|gb|EFL73352.1| arginyl-tRNA synthetase [Streptococcus pneumoniae BS457] gi|302645851|gb|EFL76079.1| arginyl-tRNA synthetase [Streptococcus pneumoniae BS397] Length = 563 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 141/595 (23%), Positives = 251/595 (42%), Gaps = 99/595 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G ++ A + + AEL K++ +A ++N + Sbjct: 26 LLETPKNSEMGDIAFPAFSLAKVERKAPQMIAAELAE---KMNSQAFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + ++L ++ Y IGK V I+ S N P +GH R V+GD+L+ Sbjct: 83 LDKSAISAQVLQAVTTEKEHYADQNIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + GY+ + ++ D G Q L ++ W ++A+ + D LK Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194 Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267 + A+ + L+ +W ++ D A+ + RD+ L N ++ E D + Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELKVEFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + ++D L+ +G + E S+ Q ++++ ++ P Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLLE-------SEGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L KSDG+ Y DLA Y K +Y+ F IYV+G + S + K+L+AV + + Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 ++ + ++G K+S R G+ I L + E Sbjct: 355 D-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTIAEAVSRAKVQIEAKNPELENKDQVA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +++F L + DFD V + + P YVQYAYAR +SI R+A D P Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKA-DFKP 468 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 + + S DT ++I + ++PR+I A EP +A + LA F+ Sbjct: 469 ETSGNY---------SLNDTESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQSFN 519 Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R E+P RL L +A A ++ L ++GVE+P +M Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563 >gi|18977752|ref|NP_579109.1| arginyl-tRNA synthetase [Pyrococcus furiosus DSM 3638] gi|23822193|sp|Q8U149|SYR_PYRFU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|18893491|gb|AAL81504.1| arginyl-tRNA synthetase [Pyrococcus furiosus DSM 3638] Length = 629 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 101/342 (29%), Positives = 156/342 (45%), Gaps = 44/342 (12%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLS-PSYLRK 100 G T A L+R L PL IA+ I + K P IA G++N +L P + Sbjct: 39 GDFGTPVAFQLARLLRKSPLIIAQEIAEKFNKNKPKEVKKAIAVNGYVNFFLDYPQISKL 98 Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 ++ +I+ G EYGR+ IGKG KV +E S NPT P+H+GH R A++GDT+A ++ F GY+ Sbjct: 99 VIEAILGYGTEYGRSEIGKGKKVIVEHTSVNPTKPLHMGHARNAILGDTVARILRFLGYQ 158 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE-----------GYYPGVYLKHV 209 V + YI+D G Q V+W Y D + E + G+ V Sbjct: 159 VEVQNYIDDLGVQF----AQVYWGYLNLKRKFDELMKELKEKIPKNNPIDHVLGLLYVEV 214 Query: 210 GKEL-----ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 K++ +K EL+ EE+ L K + ++K + L +LNI +D+ + E D Sbjct: 215 NKKIEESSEVEKEIRELMKKLEERELNGRK--LAEEVVKAQMETLYSLNIYYDLLVWESD 272 Query: 265 F--HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322 R I+ + N E P + K MD +L D+ Sbjct: 273 IVSTRLFEKTIKLLEKN--------ENFYTPKEGKYKGAFVMDLSKLF-------PDMKN 317 Query: 323 PLL---KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 P L +SDG+ TY D+AY K+ + +++Y +H+ Sbjct: 318 PYLVLRRSDGTATYTGKDIAYHLWKFGKIDIDLMYKKWDEHT 359 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 76/133 (57%), Gaps = 9/133 (6%) Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 Y+QYA+ARC SI R+A+++ D+ + + ++ E +LI+ L+ +P +++ A Sbjct: 506 YIQYAHARCSSILRKAEELGISTDWKSLLK--VANFNQITEKERELIMLLSRFPEIVQQA 563 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572 +P+ +A+Y ++AS F+ + ++P ++ + + RL LV A ++ + Sbjct: 564 GTDLKPHLIAWYANEVASTFNKFYM---DHPVIKAEEG----VREARLLLVMATRQVLRN 616 Query: 573 GLNIIGVESPNEM 585 L ++G+E+P++M Sbjct: 617 SLWLMGIEAPDKM 629 >gi|41053407|ref|NP_956342.1| arginyl-tRNA synthetase, cytoplasmic [Danio rerio] gi|28277820|gb|AAH45884.1| Arginyl-tRNA synthetase [Danio rerio] Length = 661 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 145/591 (24%), Positives = 251/591 (42%), Gaps = 89/591 (15%) Query: 43 GHLSTNAAMILS-----RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S + L + P IAE IV I + ++ IAG GFIN++L ++ Sbjct: 112 GDYQCNSAMAMSQMMKAKGLKVSPREIAEKIVQNIPNNDLIEKTEIAGPGFINVHLKRNF 171 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + K+LS+++V+G++ + K KV ++F S N MHVGH R ++GD++ L F Sbjct: 172 VSKLLSNVLVNGVQPPP--LQKKKKVIVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFL 229 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217 GYEV R ++ D G Q L + Q N S P P L+ KE ++ Sbjct: 230 GYEVLRLNHVGDWGTQFGMLIAHL----QDKFPNYLSVSP----PIGDLQAFYKESKKRF 281 Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277 + F + + +VK S +A D +KA N+ D +S +F + + + + Sbjct: 282 DED-EEFKKRAYKCVVKLQSKEA------DFIKAWNLICD--VSRKEFQK-----VYNCL 327 Query: 278 D-NLARQGYVY-----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 D ++ +G Y ++ + K + D RK ++F G + ++KSDG Y Sbjct: 328 DISIKERGESYYQDMMTAVVKEFEEKGLVEVDEGRK-IVFAP---GQSIPLTIVKSDGGY 383 Query: 332 TYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TY +DLA + + ++ D +IYV S + + + + A A + ++ R Sbjct: 384 TYDTSDLAAIRNRLFDEKADIIIYVTDSGQAMHFQVIFAAAQLIGWYDPKV-------TR 436 Query: 391 LYRDGMPI-------KMSKRAGDFITLRHVVDE--------------------------- 416 + G + K R+GD + L +++E Sbjct: 437 VEHAGFGVVLGEDKKKFKTRSGDTVRLMDLLEEGLKRSMDKLKEKERDKVLTPEELEKAQ 496 Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 V +++ L F F K+ + + N Y+ YA+ R RSI R A Sbjct: 497 RAVAFGCIKYADLSHNRINDYVFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLANIQEAA 555 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 L +VI + E +L + +P +++ T + L YLY+LA+ F Sbjct: 556 LRKAAETTDVILDHEK----EWKLGKCILRFPEILQKITDDLLLHTLCDYLYELATTFTE 611 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + R K+ M R+ L A A+++ G +I+G+ M Sbjct: 612 FYDSCYCVEKDRQT-GEVVKVNMWRMLLCEATAAVMAKGFDILGINPVQRM 661 >gi|325849255|ref|ZP_08170691.1| arginine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480199|gb|EGC83267.1| arginine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 568 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 138/590 (23%), Positives = 248/590 (42%), Gaps = 85/590 (14%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA-ELIVARIKIDPDVDSVFIAGKGFINL 91 +IE P G S IL++ L +P IA EL K D S + ++N Sbjct: 27 LIEIPPQDDMGDFSF-PCFILAKKLRKNPAIIAKELKEDLEKEDSPYFSKVDSLNAYLNF 85 Query: 92 YLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 Y+ YL+ ++L I+ YGR+ +GKG + ++F S N P H+GH R V+GD + Sbjct: 86 YIDRKYLQGQVLREIIKEKENYGRSDMGKGKNIVLDFSSVNIAKPFHIGHIRSTVIGDAI 145 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 ++ F GY YI D G Q + A W L N P +Y+++ Sbjct: 146 RNIHDFLGYNTIASNYIGDYGTQFGIMIAAYKLWGDDDKLNQN----PIKELLNLYVRYN 201 Query: 210 GKELADKYSSELLNFPEEKW--LPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFH 266 + +D+ +++N +++ L ++ +V+ K + + + I+ D++H Sbjct: 202 EQASSDQ---DMMNEARDEFRRLEEGEEEAVRLWSWFKEISFKEFDRVYKLLDINFDNYH 258 Query: 267 RG--DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323 I D++D L + + E S Q D+ + D P Sbjct: 259 GEAYQSKYIPDVLDQLKEKNLLTE-------SDGAQIIDLSK-------------YDLPP 298 Query: 324 --LLKSDGSYTYFAADLAY-FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--------- 371 ++KS+GS Y D+A K F +YV+ + + + ++L A+ Sbjct: 299 AIIIKSNGSSAYITRDIATAINRKKTYDFSENLYVVATQQNLHFQQLWAILELMGYDFYK 358 Query: 372 --------------AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 +S +K Q+ V L +++ D M R L V Sbjct: 359 DCKHIPFGMVSLKDQTLSTRKGQV-VFLEDVLNKAIDKTKEIMKDRDSALENLDETAQIV 417 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAK-DIFPDL 475 G +V+F L+ + FD+ + + + P YVQY+YAR +S+ ++ + D F + Sbjct: 418 GIGAVKFQELYNNRIKDYVFDWDNLLNFEGETGP--YVQYSYARAKSVLKKGQIDNFDKV 475 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 +FDL + E LI LAE+ I A EP ++ + D+A F+ Sbjct: 476 EFDLLNTD----------EEFNLIKSLAEFKESIVRAKEKYEPSIISRKVMDIAKNFNKF 525 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + + ++ KL RL L +A + +I +GL ++G+++ ++M Sbjct: 526 YNTSK-------IMVDDEKLKEQRLALAYATSIVIKNGLKLLGIKTVDQM 568 >gi|90077474|dbj|BAE88417.1| unnamed protein product [Macaca fascicularis] Length = 660 Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 138/594 (23%), Positives = 255/594 (42%), Gaps = 95/594 (15%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S+ L ++P IAE I + + ++ V IAG GFIN++L + Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDF 170 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + L+S++V+G++ +G+ KV ++F S N MHVGH R ++G++++ L F+ Sbjct: 171 VSEQLTSLLVNGVQLP--AVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESVSRLFEFA 228 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217 GY+V R ++ D G Q L + ++ L + P G Y KE ++ Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSP---PIGDLQAFY-----KESKKRF 280 Query: 218 SSELLNFPEEKWLPIV----KDYSVQAMMKIIRD-DLKALNIQHDIFISEDDFHRGDP-- 270 +E F + + +V K+ + K+I D + N +D + RG+ Sbjct: 281 DTE-EEFKKRAYQCVVLLQGKNPDITKAWKLICDVSRREFNKIYDA-LDVSLIERGESFY 338 Query: 271 -SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + DI+ +G+V + D D ++++F + G + ++KSDG Sbjct: 339 QDRMNDIVQEFEDRGFV--------------QVD-DGRKIVF---VPGCSIPLTIVKSDG 380 Query: 330 SYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 YTY +DLA K + E D +IYV+ S S + + + A A + ++ Sbjct: 381 GYTYDTSDLAAIKQRLSEEKADMIIYVVDSGQSVHFQTIFAAAQMIGWYDPKV------- 433 Query: 389 VRLYRDGMPI-------KMSKRAGDFITLRHVVDE------------------------- 416 R++ G + K RAG+ + L ++ E Sbjct: 434 TRVFHAGFGVVLGEDKKKFKTRAGETVRLMDLMGEGLKRSMDKLKEKERDKVLTAEELNA 493 Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 + D +++ L F F K+ + + N Y+ YA+ R RSI R A Sbjct: 494 AQTSIAYDCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA---- 548 Query: 473 PDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 ++D ++ + + D E +L + +P +++ + L Y+Y+LA+ Sbjct: 549 -NIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATT 607 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + + R K+ M R+ L AVA+++ G +I+G++ M Sbjct: 608 FTEFYDSCYCVEKDRQT-GKILKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660 >gi|182892034|gb|AAI65718.1| Rars protein [Danio rerio] Length = 661 Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 145/591 (24%), Positives = 251/591 (42%), Gaps = 89/591 (15%) Query: 43 GHLSTNAAMILS-----RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S + L + P IAE IV I + ++ IAG GFIN++L ++ Sbjct: 112 GDYQCNSAMAMSQMMKAKGLKVSPREIAEKIVQNIPNNDLIEKTEIAGPGFINVHLKRNF 171 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + K+LS+++V+G++ + K KV ++F S N MHVGH R ++GD++ L F Sbjct: 172 VSKLLSNVLVNGVQPPP--LQKKKKVIVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFL 229 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217 GYEV R ++ D G Q L + Q N S P P L+ KE ++ Sbjct: 230 GYEVLRLNHVGDWGTQFGMLIAHL----QDKFPNYLSVSP----PIGDLQAFYKESKKRF 281 Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277 + F + + +VK S +A D +KA N+ D +S +F + + + + Sbjct: 282 DED-EEFKKRAYKCVVKLQSREA------DFIKAWNLICD--VSRKEFQK-----VYNCL 327 Query: 278 D-NLARQGYVY-----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 D ++ +G Y ++ + K + D RK ++F G + ++KSDG Y Sbjct: 328 DISIKERGESYYQDMMTAVVKEFEEKGLVEVDEGRK-IVFAP---GQSIPLTIVKSDGGY 383 Query: 332 TYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TY +DLA + + ++ D +IYV S + + + + A A + ++ R Sbjct: 384 TYDTSDLAAIRNRLFDEKADIIIYVTDSGQAMHFQVIFAAAQLIGWYDPKV-------TR 436 Query: 391 LYRDGMPI-------KMSKRAGDFITLRHVVDE--------------------------- 416 + G + K R+GD + L +++E Sbjct: 437 VEHAGFGVVLGEDKKKFKTRSGDTVRLMDLLEEGLKRSMDKLKEKERDKVLTPEELEKAQ 496 Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 V +++ L F F K+ + + N Y+ YA+ R RSI R A Sbjct: 497 RAVAFGCIKYADLSHNRINDYVFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLANIQEAA 555 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 L +VI + E +L + +P +++ T + L YLY+LA+ F Sbjct: 556 LRKAAETTDVILDHEK----EWKLGKCILRFPEILQKITDDLLLHTLCDYLYELATTFTE 611 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + R K+ M R+ L A A+++ G +I+G+ M Sbjct: 612 FYDSCYCVEKDRQT-GEVVKVNMWRMLLCEATAAVMAKGFDILGINPVQRM 661 >gi|225861897|ref|YP_002743406.1| arginyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14] gi|298230662|ref|ZP_06964343.1| arginyl-tRNA synthetase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254470|ref|ZP_06978056.1| arginyl-tRNA synthetase [Streptococcus pneumoniae str. Canada MDR_19A] gi|298501578|ref|YP_003723518.1| arginine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A] gi|254782989|sp|C1CTY4|SYR_STRZT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|225727935|gb|ACO23786.1| arginyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14] gi|298237173|gb|ADI68304.1| arginine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A] gi|327388815|gb|EGE87163.1| arginyl-tRNA synthetase [Streptococcus pneumoniae GA04375] Length = 563 Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 141/595 (23%), Positives = 248/595 (41%), Gaps = 99/595 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G ++ A + + AEL K++ +A ++N + Sbjct: 26 LLETPKNSEMGDIAFPAFSLAKVERKAPQMIAAELAE---KMNSQAFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + ++L ++ Y IGK V I+ S N P +GH R V+GD+L+ Sbjct: 83 LDKSAISAQVLQAVTTEKEHYADQNIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + GY+ + ++ D G Q L ++ W ++A+ + D LK Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194 Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267 + A+ + L+ +W ++ D A+ + RD+ L N ++ E D + Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELKVEFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + ++D L+ +G + E S+ Q ++++ ++ P Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLLE-------SEGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L KSDG+ Y DLA Y K +Y+ F IYV+G + S + K+L+AV + + Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 ++ + ++G K+S R G+ I L V E Sbjct: 355 D-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAVSRAKVQIEAKNPELENKDQVA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +++F L + DFD V + + P YVQYAYAR +SI R+A Sbjct: 412 HAVGIGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD---- 465 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 F S DT ++I + ++PR+I A EP +A + LA F+ Sbjct: 466 ------FKPETAGNYSLNDTESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQSFN 519 Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R E+P RL L +A A ++ L ++GVE+P +M Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563 >gi|171186028|ref|YP_001794947.1| arginyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta] gi|170935240|gb|ACB40501.1| arginyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta] Length = 635 Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 136/551 (24%), Positives = 236/551 (42%), Gaps = 123/551 (22%) Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +E SANP P+H+GH R A++GD+LA L+ F G V +Y++D G Q+ A+ Sbjct: 118 VEHTSANPIHPLHIGHGRNAILGDSLARLLRFCGNSVETHFYVDDCGVQVMYAAIG---- 173 Query: 185 YQQALYNNDSDL---------PEGYYPGVY--------LKHVGKELA----DKYSSELLN 223 YN DL P+ +Y + + +ELA ++ E+++ Sbjct: 174 -----YNAVRDLAGERIRRVKPDVVVGAIYSATNAVAEIGRLKRELAAVQDEERRREIIS 228 Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR----GDPSP---IRDI 276 +E W+ ++K + A I+ ++L D+ + +R GDP +R++ Sbjct: 229 EIDE-WVGVLKRI-MDAEGDIVNRLAESLG-GRDLVAEAAELNRRYEAGDPEARRAVREV 285 Query: 277 ID--------NLARQGY------------VYEG----ILPPPKSKTTQKCDMDRKQLLFR 312 +D L+R G V+ G I+ + + Q + ++FR Sbjct: 286 VDLVLKGQRETLSRLGIEIDRWDYESEISVWSGEAARIVAELQRRWPQYVESRGGAVVFR 345 Query: 313 STMVGDD------VDRP-------LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + +D +D P L +SDG+ Y D+AY + + FD +I V+ ++ Sbjct: 346 ADKFVEDFKLWDVLDLPKFIPPVTLTRSDGTTLYVTRDVAYALWQTRQEFDRVIRVISTE 405 Query: 360 --HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416 H R+ A E+ ++ E+V L KMS R G +I L ++DE Sbjct: 406 QTHEQAHVRIILYALGFQEEAKRLMHYAYEMVNL----PGAKMSARRGQYIALDEILDEA 461 Query: 417 ----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454 VG SVR+ L + ++F + V ++N ++ Sbjct: 462 AERSAALVKEKNPEVAGVIAERVGVGSVRYAFLSTGPRKPIEFKWETVLNM-RQNSGSFL 520 Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514 QY Y R SI +A +L + P ++P+E E LI+ +AE+P V++ A Sbjct: 521 QYTYVRAYSILEKATG--ANLAGVVIPGEILPEERE-------LILKVAEWPGVVKTAVH 571 Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 A P +A +L LA VF+ ++ P L+ L RL LV+AV +++ +G Sbjct: 572 ALRPDYVAEFLDGLALVFNSYYEKA---PVLK----AEEPLRSFRLALVNAVKNVLAAGF 624 Query: 575 NIIGVESPNEM 585 I+G+ + +M Sbjct: 625 YILGIPTLTKM 635 >gi|322832419|ref|YP_004212446.1| arginyl-tRNA synthetase [Rahnella sp. Y9602] gi|321167620|gb|ADW73319.1| arginyl-tRNA synthetase [Rahnella sp. Y9602] Length = 577 Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 139/584 (23%), Positives = 248/584 (42%), Gaps = 84/584 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE +V + + + V IAG GFIN++L P+++ + Sbjct: 37 GDYQANGVMSVAKKLGMPPRQLAEKVVELLDLSGIANKVEIAGPGFINIFLDPAFVAAHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 S ++ + G + T V I++ + N MHVGH R ++GD F G++V Sbjct: 97 DS-ALNDEKLGITPVEPQTIV-IDYSAPNVAKEMHVGHIRSTIIGDAAVRTNEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQ--ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 R ++ D G Q L ++ + Q A N +DL E Y A K E Sbjct: 155 RANHVGDWGTQFGML-IAYLEKVQNENAGDMNLADLEEFY-----------RAAKKNYDE 202 Query: 221 LLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHD---IFISEDDFHRGDP-- 270 F E +VK +Y +Q K++ +K + ++ + ++EDD G+ Sbjct: 203 DEAFAERARGYVVKLQGGDEYCLQMWRKLVDVTMKQNQLTYNRLNVTLTEDDVM-GESLY 261 Query: 271 -SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 S + I+ +L +G + S+ +D + GD + + K DG Sbjct: 262 NSMLPGIVSDLQAKGLAVD-------SEGAVVVYLDEYK-----NKEGDPMGVIIRKKDG 309 Query: 330 SYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA-------AVSEKKAQI 381 Y Y D+A K +YE G D ++Y + S ++ + +A +V+ + Sbjct: 310 GYLYTTTDIACAKYRYETLGADRVLYYIDSRQHQHLMQAWTIARKAGYVPDSVALEHHMF 369 Query: 382 NVLLCELVRLY--RDGMPIKMSK-------RAGDFIT-----------LRHVVDEVGSDS 421 ++L + + + R G +K+S RA IT L +V+ VG + Sbjct: 370 GMMLGKDGKPFKTRSGGTVKLSDLLDEAIDRARKLITEKNPEMKDTGELEKLVNAVGIGA 429 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 +++ L + + FD+ + + N Y+QYAY R SIF++A D+D + Sbjct: 430 IKYADLSKSRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVASIFKRA-----DIDVNSLT 483 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + V+ E E L L ++ V+ P+ + YLYD+A +F + H Sbjct: 484 QPVVLSEER----EAALATRLLQFEEVLTVVAREGTPHTMCAYLYDVAGLFSSFYEH--- 536 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A + RL+L + +GL+ +G+E+ M Sbjct: 537 ---CPILNAEDETSRNSRLKLALLTQRTLKTGLDTLGIETVERM 577 >gi|212633367|ref|YP_002309892.1| arginyl-tRNA synthetase [Shewanella piezotolerans WP3] gi|226701384|sp|B8CI29|SYR_SHEPW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|212554851|gb|ACJ27305.1| Arginyl-tRNA synthetase [Shewanella piezotolerans WP3] Length = 581 Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 147/602 (24%), Positives = 235/602 (39%), Gaps = 96/602 (15%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 RI ++R +D +HG +TN AM+L++ +P IA+LI+ + V+ V IAG GFIN Sbjct: 29 RIQVDRTKDKSHGDFATNLAMMLTKAARKNPREIAQLIIDNLPQSSHVEKVEIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 ++ + L L + S G L T V +++ S N MHVGH R ++GD++ Sbjct: 89 FFIDDNALANQLMDALNSD-HLGVTLPESQTVV-VDYSSPNLAKEMHVGHLRSTIIGDSV 146 Query: 151 ASLMAFSGYEVTREYYINDAG--------------------AQINTLALSVFWRYQQALY 190 + F G+ V R+ ++ D G AQI L F+R + + Sbjct: 147 VRSLEFMGHNVIRQNHVGDWGTQFGMLLAYMEELRAANGEQAQIELSDLENFYRAAKVRF 206 Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR---- 246 + D V G E +K E + I + V + +R Sbjct: 207 DESEDFANRARKLVVALQSGDEYCNKLWREFNDISLSHCHEIYERLGVSLTRQDVRGESS 266 Query: 247 --DDLKALNIQHD-------------IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291 DDL+ + D +F E G+P P+ I A GY+Y Sbjct: 267 YNDDLEQVVADLDSQGLLSESNGAKVVFQEEFKNKEGEPLPV---IIQKADGGYLY---- 319 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD------GSYTYFAADLAYFKCKY 345 D + +RS ++ DR L D + A A F + Sbjct: 320 ----------ATSDMAAMRYRSNVL--KADRALYFVDLRQALHFQQVFKLAKTAKF-VRE 366 Query: 346 ERGFDNMIY--VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403 E F++M + + G D + R V + K + + ELVR M Sbjct: 367 EMSFEHMGFGTMNGEDGRPFKTRSGGVVKLIDLLK-EADTRALELVRSKNPDM------- 418 Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463 D L + VG SV++ L + + F F ++ + N Y+ YAY R Sbjct: 419 --DEAELAEIARVVGIASVKYADLSKNRTSDYIFSFEQML-SFEGNTAPYLLYAYTRVAG 475 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 IF++A+D+ DL + V+ E E D L LA++ V+ +P+ L Sbjct: 476 IFKRAQDV--DLS---DAKIVLEHEKEKD-----LGTKLAQFGEVMNRVVNKGQPHALCA 525 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 YL++LA F + + A+ RL L A + GLN++G+E+ Sbjct: 526 YLFELAGAFSSFYE------ACPVLAADTEAQKKSRLLLAQLTAKTLKQGLNLLGLETLE 579 Query: 584 EM 585 M Sbjct: 580 RM 581 >gi|146319780|ref|YP_001199492.1| arginyl-tRNA synthetase [Streptococcus suis 05ZYH33] gi|146321977|ref|YP_001201688.1| arginyl-tRNA synthetase [Streptococcus suis 98HAH33] gi|253752763|ref|YP_003025904.1| arginyl-tRNA synthetase [Streptococcus suis SC84] gi|253754588|ref|YP_003027729.1| arginyl-tRNA synthetase [Streptococcus suis P1/7] gi|253756521|ref|YP_003029661.1| arginyl-tRNA synthetase [Streptococcus suis BM407] gi|166232848|sp|A4W4J9|SYR_STRS2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|166232849|sp|A4VYA3|SYR_STRSY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|145690586|gb|ABP91092.1| Arginyl-tRNA synthetase [Streptococcus suis 05ZYH33] gi|145692783|gb|ABP93288.1| Arginyl-tRNA synthetase [Streptococcus suis 98HAH33] gi|251817052|emb|CAZ52704.1| arginyl-tRNA synthetase [Streptococcus suis SC84] gi|251818985|emb|CAZ56832.1| arginyl-tRNA synthetase [Streptococcus suis BM407] gi|251820834|emb|CAR47600.1| arginyl-tRNA synthetase [Streptococcus suis P1/7] gi|292559386|gb|ADE32387.1| Arginyl-tRNA synthetase [Streptococcus suis GZ1] gi|319759181|gb|ADV71123.1| arginyl-tRNA synthetase [Streptococcus suis JS14] Length = 562 Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 149/604 (24%), Positives = 255/604 (42%), Gaps = 118/604 (19%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E+P+ G ++ A L++ P IA IV K+D +A ++N + Sbjct: 26 LLEKPKSSEMGDIAF-PAFSLAKVERKAPQAIAADIVE--KLDTTGFENVVATGPYVNFF 82 Query: 93 LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + + ++L+ ++ +YG+ IG+G V I+ S N P VGH R V+GD LA Sbjct: 83 LDKAAISHQVLTDVITEKDQYGKLNIGQGRNVTIDMSSPNIAKPFSVGHLRSTVIGDALA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY+ R ++ D G Q L ++ W + A+ + P +Y++ + Sbjct: 143 NIHEKLGYKPIRINHLGDWGKQFGMLIVAYKLWGDKAAVEAD----PISELLKLYVR-IN 197 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 E +K L+ +W ++D +A + + RD+ L N +D D + Sbjct: 198 AEAEEKPE---LDDEARQWFKKLEDGDPEAHELWQWFRDESLVEFNRIYDKLDVTFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323 G+ + + I L +G + E SK + D++ L P Sbjct: 255 GEAFYNDKMDEGIQILEEKGLLQE-------SKGAKIVDLESYNL-------------PP 294 Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374 ++K+DG+ Y D+A Y K Y+ F IYV+G + + K+L+AV + Sbjct: 295 ALIMKTDGATLYITRDMATAMYRKRTYD--FVKSIYVVGQEQINHFKQLKAVLKEMDFDW 352 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 S+ I L +D K+S R G+ I L +DE Sbjct: 353 SDDMTHITFGLVT-----KDKK--KLSTRKGNIILLEPTLDEAISRALTQIEAKNPDLEN 405 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG +V+F L DFD V + + P YVQYAYAR +SI R+A Sbjct: 406 KEEVAHAVGVGAVKFYDLKTDRDNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKA 463 Query: 469 KDIFPDLDFDLFPRNVIPQ-ESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 N +P E+++ DT ++I H+ + V+E A +P +A Y Sbjct: 464 --------------NFVPNAENDYKLADTESWEIIKHIQNFSAVVERAGDKFDPSLIAKY 509 Query: 525 LYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 +LA F+ +++H R E+P RL L +A ++ L ++GV++ Sbjct: 510 AINLAQAFNKYYAHTRILDESPERD-----------SRLALAYATGLVLKEALRLLGVKA 558 Query: 582 PNEM 585 P +M Sbjct: 559 PEKM 562 >gi|310778226|ref|YP_003966559.1| arginyl-tRNA synthetase [Ilyobacter polytropus DSM 2926] gi|309747549|gb|ADO82211.1| arginyl-tRNA synthetase [Ilyobacter polytropus DSM 2926] Length = 570 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 132/591 (22%), Positives = 255/591 (43%), Gaps = 85/591 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I IE + G TN AM+ ++ L +P IAE +V + + ++ + +AG GFIN+ Sbjct: 28 IDIEAASNEKFGDFQTNFAMVNAKVLRSNPRAIAENVVNNLVDNNVIEKIEVAGPGFINI 87 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +L YL + I S +Y + + V I++ S N MH+GH R ++GD++ Sbjct: 88 FLKEEYLGDRVRKI--STEKYDLSFLDTHGDVIIDYSSPNIAKRMHIGHLRSTIIGDSIK 145 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNND-SDLPEGYYPGVYLKHV 209 + + GY+V + +I D G Q L + W ++A N +L Y Sbjct: 146 RIYRYLGYKVVADNHIGDWGTQFGKLIIGYRNWLDREAYKANPIEELERVYVEFSKNSEE 205 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSV-QAMMKIIRDDLKA----LNIQHDIFISEDD 264 EL D+ EL E ++YS+ Q +K+ D+ L + D + E Sbjct: 206 NTELEDQAREELRKLHEGD----EENYSLWQEFIKVSLDEYNKVYGRLGVDFDTYYGESF 261 Query: 265 FHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323 +H P+ + +++D N+A++ + K K C + +K Sbjct: 262 YHDMMPAVVEELLDKNIAKEDDGANVVFFEEKDK-LHPCIVQKK---------------- 304 Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 DG++ Y +D+A K + E + +IYV + ++ + + + + + Sbjct: 305 ----DGAFLYATSDIATVKFRKENYDVNQIIYVTDERQQDHFRQFFKITDMLGWEVKKNH 360 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 V + + +G+ S R G+ I L H++DE ++ ++ KN L + + Sbjct: 361 VWFG--IMRFAEGI---FSSRKGNVIRLEHLLDEGKKKALE--VVEEKNPTLSAEEKANI 413 Query: 443 KE-------------QSKENPVF---------------YVQYAYARCRSIFRQAKDIFPD 474 E Q++++PV Y+QY+YAR +SI R+ + Sbjct: 414 SEVVGIGAIKYADLSQNRQSPVIFEWDKILSFEGNTAPYLQYSYARIQSILRKGAENSKV 473 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 L D +I +ES +E L+++++ +P+++ A + P + YL++L+ F+ Sbjct: 474 LKED---SKIILEES----AERSLVLYMSLFPKMVMKAAESFRPNLVTDYLFELSRRFNT 526 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ P L ++ RL + A ++ GL+++G+ + + M Sbjct: 527 FYNSC---PILN----QEDEILYSRLLIADRTAKVLKEGLDLLGIGTVDRM 570 >gi|219849478|ref|YP_002463911.1| arginyl-tRNA synthetase [Chloroflexus aggregans DSM 9485] gi|254782951|sp|B8G4J9|SYR_CHLAD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|219543737|gb|ACL25475.1| arginyl-tRNA synthetase [Chloroflexus aggregans DSM 9485] Length = 574 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 153/618 (24%), Positives = 258/618 (41%), Gaps = 91/618 (14%) Query: 11 LKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69 L+ ++ +I I K+ +D I I P+ T ++ LG+DP +A + Sbjct: 5 LERFITDIKDAIAATGKVPVDLIEITTPKPNIPAD-RTFVTFKAAKVLGVDPAKLAAELA 63 Query: 70 ARIKIDPD--VDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIE 126 A I PD + V G F+N L P L +L+ I +G YG G G V I+ Sbjct: 64 ATIAPPPDSLIGEVTATG-AFLNFSLHPQRLAAAVLNEIETAGEAYGTVADGAGRTVVID 122 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 + S N MHVGH R ++G L + GY V + ++ D G Q + L+ RY Sbjct: 123 YSSPNIAKRMHVGHIRSTIIGQALVHIFRALGYRVIGDNHLGDWGTQFGII-LAAMQRYG 181 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 + ++ + E + L +Y++E+ K P ++D + + + + R Sbjct: 182 RPQNEGEAAMAE-----------LEALYARYNAEM------KDDPALEDEARRWSLALER 224 Query: 247 DDLKALNI-QHDIFISEDDFHRG-DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 D +A ++ Q + +S R D IR + A YE +LP + Sbjct: 225 GDPEARSLWQWCVDLSLRAAQRNYDRLGIR---FDYAYGESFYEAMLPGVIEEAL----- 276 Query: 305 DRKQLLFRST--MVGDDVDR----PLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMG 357 R + FR V ++D+ + +SDG Y D+A K + E ++IYV+ Sbjct: 277 -RSEAAFRDVDGAVVAELDKLPKFIIQRSDGGTVYMTRDIATIKFRLQEFSPSHIIYVVD 335 Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE- 416 + + ++L A+ A+ + V + V DG P +S + G+ + L ++D+ Sbjct: 336 ARQELHFRQLFAIVRAMGYARDVELVHVPFGVITTPDGQP--LSTKKGNMVYLEALLDDA 393 Query: 417 --------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 VG +V + L++ + D+ ++ + N Sbjct: 394 VARARALVDAKSADLPLEERAAIAEAVGIGAVIYNDLYQDPRRNITLDWDRML-SIEGNS 452 Query: 451 VFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 Y+QY++ARCRSI R+A D + D L SE +LI HLA P Sbjct: 453 AAYLQYSHARCRSILRRAADEGVALAEADLTLLTH----------PSEQRLIRHLARLPE 502 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 + A P+ +A + Y A F + + P LR A L RLQLV A A Sbjct: 503 AVREAGARYAPFVIADWCYTTAREFGIFFE---QCPVLR---AETPALRAARLQLVAATA 556 Query: 568 SIINSGLNIIGVESPNEM 585 + + +GL ++G+++P M Sbjct: 557 NALRNGLALLGIQAPERM 574 >gi|262041990|ref|ZP_06015172.1| arginine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259040688|gb|EEW41777.1| arginine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 577 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 137/590 (23%), Positives = 246/590 (41%), Gaps = 96/590 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE +++ + ++ + V IAG GFIN++L P++ L Sbjct: 37 GDYQANGVMAVAKKLGMAPRQLAEQVLSHLDLNGIANKVEIAGPGFINIFLDPAF----L 92 Query: 103 SSIVVSGIEYGRNLIGK--GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + V ++ R + K + +++ + N MHVGH R ++GD + F G++ Sbjct: 93 ADNVNRALQSERLGVTKPQAQTIVVDYSAPNVAKEMHVGHLRSTIIGDASVRTLEFLGHK 152 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 V R ++ D G Q L ++ + QQ N ++ G Y + A K+ E Sbjct: 153 VIRANHVGDWGTQFGML-IAYLEKQQQ---ENSGEMALADLEGFYRE------AKKHYDE 202 Query: 221 LLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPI 273 F E +VK +Y +Q K++ DI +S++ + R + + Sbjct: 203 DEAFAERARSYVVKLQGGDEYFLQMWRKLV-----------DITMSQNQITYDRLNVTLT 251 Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSDGS 330 RD + + + GI+ K+K + + ++F G+ + + K DG Sbjct: 252 RDDVMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEYKNKEGEPMGVIIQKKDGG 310 Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382 Y Y D+A K +YE D ++Y + S + V++ V +V + Sbjct: 311 YLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFG 370 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416 ++L +DG P K RAG + L ++DE Sbjct: 371 MMLG------KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMSADELENLAK 422 Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 VG +V++ L + + FD+ + + N Y+QYAY R S+FR+A D Sbjct: 423 VVGIGAVKYADLSKNRTTDYVFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKAG---IDE 478 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + + VI ++ E QL L ++ + P+ + YLYDLA +F G Sbjct: 479 NAMIDAPVVIAED-----REAQLAARLLQFEETLSVVAREGTPHVMCAYLYDLAGLFSGF 533 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + H + A + + RL+L A + GL+ +G+E+ M Sbjct: 534 YEH------CPILSAESEETRNSRLKLALLTAKTLKLGLDTLGIETVERM 577 >gi|206576111|ref|YP_002237735.1| arginyl-tRNA synthetase [Klebsiella pneumoniae 342] gi|288934593|ref|YP_003438652.1| arginyl-tRNA synthetase [Klebsiella variicola At-22] gi|238065091|sp|B5XPZ2|SYR_KLEP3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|206565169|gb|ACI06945.1| arginyl-tRNA synthetase [Klebsiella pneumoniae 342] gi|288889302|gb|ADC57620.1| arginyl-tRNA synthetase [Klebsiella variicola At-22] Length = 577 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 138/590 (23%), Positives = 242/590 (41%), Gaps = 96/590 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE +++ + ++ + V IAG GFIN++L P++ L Sbjct: 37 GDYQANGVMAVAKKLGMAPRQLAEQVLSHLDLNGIANKVEIAGPGFINIFLDPAF----L 92 Query: 103 SSIVVSGIEYGRNLIGK--GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + V ++ R + K + +++ + N MHVGH R ++GD + F G++ Sbjct: 93 ADNVNRALQSERLGVTKPQAQTIVVDYSAPNVAKEMHVGHLRSTIIGDASVRTLEFLGHK 152 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 V R ++ D G Q L ++ + QQ N ++ G Y + A K+ E Sbjct: 153 VIRANHVGDWGTQFGML-IAYLEKQQQ---ENAGEMALADLEGFYRE------AKKHYDE 202 Query: 221 LLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPI 273 F E +VK Y +Q K++ DI +S++ + R + + Sbjct: 203 DEAFAERARSYVVKLQGGDQYFLQMWRKLV-----------DITMSQNQITYDRLNVTLT 251 Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF---RSTMVGDDVDRPLLKSDGS 330 RD + + + GI+ K+K + + ++F G+ + + K DG Sbjct: 252 RDDVMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEYKNKEGEPMGVIIQKKDGG 310 Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382 Y Y D+A K +YE D ++Y + S + V++ V +V + Sbjct: 311 YLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFG 370 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416 ++L +DG P K RAG + L ++DE Sbjct: 371 MMLG------KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMSADELENLAK 422 Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 VG +V++ L + + FD+ + + N Y+QYAY R S+FR+A Sbjct: 423 VVGIGAVKYADLSKNRTTDYVFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA------- 474 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 D N P D E QL L ++ + P+ + YLYDLA +F G Sbjct: 475 GIDENAMNDAPVVIAED-REAQLAARLLQFEETLSVVAREGTPHVMCAYLYDLAGLFSGF 533 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + H + A + + RL+L A + GL+ +G+E+ M Sbjct: 534 YEH------CPILSAESEETRNSRLKLALLTAKTLKLGLDTLGIETVERM 577 >gi|94676629|ref|YP_588726.1| arginyl-tRNA synthetase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|123081491|sp|Q1LTI8|SYR_BAUCH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|94219779|gb|ABF13938.1| arginyl-tRNA synthetase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 578 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 134/587 (22%), Positives = 247/587 (42%), Gaps = 89/587 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LG+ +A+ +V+ ++++ + IAG GFIN+YL +L + Sbjct: 37 GDYQINGLMATAKQLGVPSYFLAKKVVSFLQLNGIARQIDIAGPGFINIYLDSQWLATKI 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 ++ + S G +LI + +++ S N MHVGH R ++GD A ++ F G++V Sbjct: 97 ATAIASP-RLGISLIELPQTIVVDYSSPNIAKEMHVGHIRSTIIGDASARILDFIGHKVI 155 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222 R +I D G L + QQ N D ++P + +Y ++ DKY ++ Sbjct: 156 RINHIGDWGTHFGMLIAYL----QQVEKNIDPEIPLSFLDQLY-----RQAKDKYDTDP- 205 Query: 223 NFPEEKWLPIVK-----DYSVQAMMKIIRDDLKA---------LNIQHDIFISEDDFHRG 268 +F +E +VK + ++ K+++ + +++ H+ + E ++ Sbjct: 206 SFAQEARNCVVKLQCGDSFCLKIWQKLVKITINENQKIYNRLNISLSHENIMGESKYNNM 265 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 P +II +L +G E + + KQ G+ + + K D Sbjct: 266 LP----NIIADLKAKGLAVES----AGATVIFLNEFQDKQ--------GNPLGVIIQKKD 309 Query: 329 GSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLL 385 G+Y Y D+A K +YE+ D +IY + S ++K++ + A + Q++ + Sbjct: 310 GAYLYTTTDIACIKYRYEQLKADRIIYYVDSRQHQHLKQIWTIVRKAGYIPQTMQLDHHM 369 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN----------SELL 435 ++ ++G P K R G I L ++DE R ++L + ++++ Sbjct: 370 FGMI-FDKEGKPFKT--RVGVNIKLNDLLDE-ALKRARCLILSKNMDVDPVELEHLAQVI 425 Query: 436 DFDFCKVKEQSKE-----------------NPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 K E SK N Y+ YAY R SI +++ + + Sbjct: 426 SISAIKYAELSKNRTTDYIFNWDDMLSFEGNTAPYILYAYTRIASILKRS-----NYNKQ 480 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 I E E E L V L +Y I P+ L YLY+LA F + H Sbjct: 481 QILTGSILLEKE---HEHLLAVRLLQYHETITTVAHDGRPHILCGYLYNLAVRFSSFYEH 537 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + AN+ RLQL + + GL+++G+E+ ++M Sbjct: 538 ------CSIINANSDIQRKSRLQLALLTSKTLQHGLSLLGIETVDKM 578 >gi|15901895|ref|NP_346499.1| arginyl-tRNA synthetase [Streptococcus pneumoniae TIGR4] gi|111657149|ref|ZP_01407930.1| hypothetical protein SpneT_02001629 [Streptococcus pneumoniae TIGR4] gi|18279281|sp|Q54869|SYR_STRPN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|14973589|gb|AAK76139.1| arginyl-tRNA synthetase [Streptococcus pneumoniae TIGR4] Length = 563 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 141/595 (23%), Positives = 248/595 (41%), Gaps = 99/595 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G ++ A + + AEL K++ +A ++N + Sbjct: 26 LLETPKNSEMGDIAFPAFSLAKVERKAPQMIAAELAE---KMNSQAFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + ++L ++ Y IGK V I+ S N P +GH R V+GD+L+ Sbjct: 83 LDKSAISAQVLQAVTTEKEHYADQNIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + GY+ + ++ D G Q L ++ W ++A+ + D LK Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194 Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267 + A+ + L+ +W ++ D A+ + RD+ L N ++ E D + Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELKVEFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + ++D L+ +G + E S+ Q ++++ ++ P Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLLE-------SEGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L KSDG+ Y DLA Y K +Y+ F IYV+G + S + K+L+AV + + Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWS 354 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 ++ + ++G K+S R G+ I L V E Sbjct: 355 D-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAVSRAKVQIEAKNPELENKDQVA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +++F L + DFD V + + P YVQYAYAR +SI R+A Sbjct: 412 HAVGIGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD---- 465 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 F S DT ++I + ++PR+I A EP +A + LA F+ Sbjct: 466 ------FKPETAGNYSLNDTESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQSFN 519 Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R E+P RL L +A A ++ L ++GVE+P +M Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563 >gi|108811686|ref|YP_647453.1| arginyl-tRNA synthetase [Yersinia pestis Nepal516] gi|229901967|ref|ZP_04517088.1| arginyl-tRNA synthetase [Yersinia pestis Nepal516] gi|122980195|sp|Q1CJH7|SYR_YERPN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|108775334|gb|ABG17853.1| arginyl-tRNA synthetase [Yersinia pestis Nepal516] gi|229680863|gb|EEO76958.1| arginyl-tRNA synthetase [Yersinia pestis Nepal516] gi|320015277|gb|ADV98848.1| arginyl-tRNA synthetase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 576 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 137/594 (23%), Positives = 240/594 (40%), Gaps = 105/594 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE +V + + + IAG GFIN++L + Sbjct: 37 GDYQANGVMAVAKKLGMQPRQLAERVVELLDLTGIASKIEIAGPGFINIFLDRQW----- 91 Query: 103 SSIVVSGIEYGRNLIGKGT------KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 V +EY G + +++ + N MHVGH R ++GD +AF Sbjct: 92 ---VAEKVEYALTAPKLGVAPVEPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAF 148 Query: 157 SGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPE 198 G+ V R ++ D G Q L L +F YQQA D D Sbjct: 149 LGHNVIRANHVGDWGTQFGMLIAYLEKMQNENASDMGLSDLELF--YQQAKKTYDEDEEF 206 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y+ V + D+Y ++ W +V D ++ A ++ D L + + D Sbjct: 207 SLRARAYV--VKLQSGDEYCRQM-------WRKLV-DITM-AQNQVAYDRLN-VTLTKDD 254 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + E ++ P +I+ +L +G E + T D + + G+ Sbjct: 255 VMGESLYNAMLP----EIVADLKAKGLAVE-----SEGATVVYLDEYKNK-------DGE 298 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370 + + K DG Y Y D+A K +YE G D ++Y + S + V++ V Sbjct: 299 PMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRILYYIDSRQHQHLMQAWTIVRKAGYV 358 Query: 371 AAAVSEKKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LR 411 +V + ++L + + + R G +K+S +RAG I L+ Sbjct: 359 PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLDEAVERAGKLIAEKNPDMPADELK 418 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 V++ VG +V++ L + + FD+ + N Y+QYAY R S+FR+A Sbjct: 419 QVINAVGIGAVKYADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSVFRRAGVD 477 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 L L V+ ++ E L L ++ +I P+ + YLYDLA + Sbjct: 478 ETSLTLPL----VVTEDRE-----ATLATRLLQFEEIITTVAREGTPHVMCSYLYDLAGL 528 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + H + + A + ++ RL+L A + GL+ +G+++ M Sbjct: 529 FSSFYEH------CQILNAESEEIRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 576 >gi|71735913|ref|YP_272687.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola 1448A] gi|109895018|sp|Q48PI2|SYR_PSE14 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|71556466|gb|AAZ35677.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola 1448A] Length = 578 Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 139/602 (23%), Positives = 248/602 (41%), Gaps = 101/602 (16%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE ++A + D V V IAG GF+N Sbjct: 30 IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPSDEQVSKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + + ++ G +V ++ + N MHVGH R ++GD +A Sbjct: 90 FQN-TAALAARLDAALADAHLSVRKAGAVQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ F G V R+ ++ D G Q L + + + A + SDL E +Y Sbjct: 149 NVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263 A + E F E +VK + A + K +++ H ++ ++ Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLALWTRFKDISLSHCQETYERLNVKLTPA 255 Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 D G+ + + +++++L G + E S Q ++ FR+ DD Sbjct: 256 DVM-GESAYNDDLANVVNDLKATGLLVE-------SNGAQCVFLEE----FRT---ADDT 300 Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374 P++ K+ G Y Y DLA ++ K + D ++Y + + + +++ VA A Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKA-DRVLYFVDQRQALHFQQVFEVARRAGF 359 Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410 Q+ + + RDG +K+ +RA + L Sbjct: 360 VHDGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEAEL 419 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKL-- 476 Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 FD ++ PQE E L LA++ + N P+ L YLYD Sbjct: 477 ---GTPFDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYD 526 Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 LA +F + + G ENP + RL+L + GL+++G+E+ Sbjct: 527 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 576 Query: 584 EM 585 M Sbjct: 577 RM 578 >gi|322392636|ref|ZP_08066096.1| arginine--tRNA ligase [Streptococcus peroris ATCC 700780] gi|321144628|gb|EFX40029.1| arginine--tRNA ligase [Streptococcus peroris ATCC 700780] Length = 563 Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 143/595 (24%), Positives = 253/595 (42%), Gaps = 99/595 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G ++ A L++ P IA I KI+ +A ++N + Sbjct: 26 LLETPKNSDMGDIAF-PAFSLAKVERKAPQMIAADIAE--KINGQAFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + + ++L +++ Y IG V I+ S N P +GH R V+GD+L+ Sbjct: 83 LDKAAISGQVLQNVITEKEHYADQKIGNQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + GY+ + ++ D G Q L ++ W ++A+ + D LK Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGNEEAVKAHPID--------ELLKLYV 194 Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267 + A+ + L+ +W ++ D A+ + RD+ L N ++ E D + Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELQVEFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + +++ L +G + E S+ Q ++++ ++ P Sbjct: 255 GEAFYNDKMDAVVEILENKGLLVE-------SEGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L KSDG+ Y DLA Y K +Y+ F IYV+G + S + K+L+AV + Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEMGYDWN 354 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 Q +++ + RDG K+S R G+ I L V E Sbjct: 355 Q-DIVHVPFGLVTRDGK--KLSTRKGNVILLEPTVAEAISRAKAQIEAKNPELENKDQVA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +++F L + DFD V + + P YVQYAYAR +SI R+A D P Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKA-DFKP 468 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 + + S D ++I + ++PR+I+ A EP +A + LA F+ Sbjct: 469 EAGANY---------SLNDDESWEIIKLIQDFPRIIKRAADNYEPSIIAKFAISLAQAFN 519 Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R ++P RL L +A A ++ L ++GVE+P +M Sbjct: 520 KYYAHTRILDKSPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563 >gi|238751578|ref|ZP_04613068.1| Arginyl-tRNA synthetase [Yersinia rohdei ATCC 43380] gi|238710140|gb|EEQ02368.1| Arginyl-tRNA synthetase [Yersinia rohdei ATCC 43380] Length = 576 Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 138/582 (23%), Positives = 243/582 (41%), Gaps = 81/582 (13%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + +D +V IAG GFIN++L ++ + Sbjct: 37 GDYQANGVMAVAKKLGMQPRQLAEKVIELLDLDGIASNVEIAGPGFINIFLDRQWVASKV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 ++ + G + T V +++ + N MHVGH R ++GD + F G+ V Sbjct: 97 EQ-ALTAPKLGVAPVEPQTIV-VDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGKELADKYSSEL 221 R ++ D G Q L Y + + N N SD+ G+ + + A K E Sbjct: 155 RANHVGDWGTQFGMLI-----AYLEKMQNENASDM------GLSDLELFYQQAKKTYDED 203 Query: 222 LNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHD---IFISEDDFHRGDP--- 270 F + +VK +Y Q K++ + I +D + ++ DD G+ Sbjct: 204 EEFAQRARAYVVKLQGGDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTTDDVM-GESLYN 262 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 S + I+ +L +G E + T D + + G+ + + K DG Sbjct: 263 SMLPGIVADLKAKGLAVE-----SEGATVVYLDEYKNK-------DGEPMGVIIQKKDGG 310 Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382 Y Y D+A K +YE G D ++Y + + + V++ V +V + Sbjct: 311 YLYTTTDIACAKYRYETLGADRVLYYIDTRQHQHLMQAWTIVRKAGYVPESVPLEHHMFG 370 Query: 383 VLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LRHVVDEVGSDSVR 423 ++L + + + R G +K+S +RAG I L+ VV+ VG +V+ Sbjct: 371 MMLGKDGKPFKTRSGGTVKLSDLLDEAIERAGKLIAEKNPDMPADELKQVVEAVGIGAVK 430 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + L + + FD+ + N Y+QYAY R S+F++A L L Sbjct: 431 YADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSVFKRAGIDENSLTLPL---- 485 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 VI ++ E L L ++ VI P+ + YLYDLA +F + H Sbjct: 486 VITEDRE-----AALATRLLQFEEVITTVAREGTPHVMCSYLYDLAGLFSSFYEH----- 535 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N + RL+L A + GL+ +G+++ M Sbjct: 536 -CPILNAENEESRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 576 >gi|157149704|ref|YP_001451306.1| arginyl-tRNA synthetase [Streptococcus gordonii str. Challis substr. CH1] gi|157074498|gb|ABV09181.1| arginyl-tRNA synthetase [Streptococcus gordonii str. Challis substr. CH1] Length = 562 Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 150/606 (24%), Positives = 251/606 (41%), Gaps = 122/606 (20%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E+P+ G ++ A L++ P IA IV +I D V G ++N + Sbjct: 26 LLEQPKSSDLGDIAF-PAFSLAKVERKAPQAIAADIVEKIDT-THFDKVVATGP-YVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+ + + +++ +V G +YG+ GKG V I+ S N P VGH R V+GD L+ Sbjct: 83 LNKAEISGQVIKEVVKEGADYGQQNEGKGENVTIDLSSPNIAKPFSVGHLRSTVIGDALS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY + ++ D G Q L ++ W ++A+ N D Sbjct: 143 NIFRKMGYNTIKINHLGDWGKQFGLLMVAYKKWGSKEAVEANPID--------------- 187 Query: 211 KELADKY---SSELLNFPE-----EKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIF 259 EL Y ++E+ N P W ++D +A + + RD+ L N +++ Sbjct: 188 -ELLQLYVRINAEIENDPALDDEGRLWFKKLEDGDPEATELWQWFRDESLVEFNRIYELL 246 Query: 260 ISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 E D G+ + + I L +G + E SK ++D Sbjct: 247 GVEFDSLNGEAFYNDKMDEGIKILEEKGLLEE-------SKGASIVNLD----------- 288 Query: 317 GDDVDRP---LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA 372 DV+ P + KSDG+ Y D+A + F IYV+G + S + ++L+AV Sbjct: 289 --DVNLPPAMIKKSDGATLYITRDIATAMYRARTYNFVKSIYVVGQEQSNHFRQLKAVLK 346 Query: 373 AV----SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416 + S+ ++ L R K+S R G+ I L + E Sbjct: 347 KMGFDWSDDMTHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLQEAISRAKSQIEDK 399 Query: 417 -------------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCR 462 VG +V+F L DFD V + + P Y+QYAYAR + Sbjct: 400 NPELENKEAVAHAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQ 457 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 SI R+A D PD + D + N D ++I L ++ RV++ A EP +A Sbjct: 458 SILRKA-DFTPDANAD-YRLN--------DAESWEIIKLLQDFSRVVKRAADNYEPSLIA 507 Query: 523 FYLYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 Y LA F+ +++H R E+P RL L ++ A ++ L ++GV Sbjct: 508 KYAISLAQAFNKYYAHTRILDESPERD-----------SRLALSYSTAVVLKEALRLLGV 556 Query: 580 ESPNEM 585 ++P +M Sbjct: 557 DAPEKM 562 >gi|312866812|ref|ZP_07727025.1| arginine--tRNA ligase [Streptococcus parasanguinis F0405] gi|311097595|gb|EFQ55826.1| arginine--tRNA ligase [Streptococcus parasanguinis F0405] Length = 562 Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 147/602 (24%), Positives = 250/602 (41%), Gaps = 114/602 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E+P+ G ++ A L++ P IA I KID +A ++N + Sbjct: 26 LLEQPKSSDLGDIAF-PAFSLAKVERKAPQAIAADIAE--KIDQSAFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + +++ S++ +G +YG+ GKG + I+ S N P VGH R V+GD L+ Sbjct: 83 LDKSKISDQVIKSVIEAGADYGQQDEGKGQNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY + ++ D G Q L ++ W ++A+ N P +Y+ Sbjct: 143 NIFRKMGYNTIKINHLGDWGKQFGLLMVAYKKWGSKEAVEAN----PIDELLKLYV---- 194 Query: 211 KELADKYSSELLNFPE-----EKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISE 262 + ++E+ N PE KW ++D +A + + RD+ L N + + E Sbjct: 195 -----RINAEIENDPELDEEGRKWFKKLEDGDPEATELWQWFRDESLVEFNRIYKLLGVE 249 Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322 D G+ + D +D Q +G+L K + + DDV+ Sbjct: 250 FDSLNGE-AFYNDKMDE-GVQILEDKGLLKESKGASIVEL---------------DDVNL 292 Query: 323 P---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV-- 374 P + KSDG+ Y D+A Y Y F IY +G + S + ++L+AV + Sbjct: 293 PPAMIKKSDGATLYITRDIATAIYRARTY--NFVKNIYAVGQEQSNHFRQLKAVLKKMGF 350 Query: 375 --SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------- 416 S+ ++ L R K+S R G+ I L + E Sbjct: 351 DWSDDMVHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLQEAISRAKAQIEEKNPDL 403 Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFR 466 VG +V+F L DFD V + + P YVQYAYAR +SI R Sbjct: 404 ENKEEVAHAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILR 461 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 +A F + S D ++I L ++ RV++ A +P +A Y Sbjct: 462 KAN----------FTPSTDATYSLSDPESWEIIKLLQDFSRVVKRAAENYDPSLIAKYAI 511 Query: 527 DLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 +LA F+ +++H R E+P RL L ++ A ++ L ++GV++P Sbjct: 512 NLAQAFNKYYAHTRILDESPERE-----------SRLALSYSTAVVLKEALRLLGVDAPE 560 Query: 584 EM 585 +M Sbjct: 561 KM 562 >gi|330001087|ref|ZP_08303897.1| arginine--tRNA ligase [Klebsiella sp. MS 92-3] gi|328537789|gb|EGF63987.1| arginine--tRNA ligase [Klebsiella sp. MS 92-3] Length = 561 Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 137/590 (23%), Positives = 246/590 (41%), Gaps = 96/590 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE +++ + ++ + V IAG GFIN++L P++ L Sbjct: 21 GDYQANGVMAVAKKLGMAPRQLAEQVLSHLDLNGIANKVEIAGPGFINIFLDPAF----L 76 Query: 103 SSIVVSGIEYGRNLIGK--GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + V ++ R + K + +++ + N MHVGH R ++GD + F G++ Sbjct: 77 ADNVNRALQSERLGVTKPQAQTIVVDYSAPNVAKEMHVGHLRSTIIGDASVRTLEFLGHK 136 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 V R ++ D G Q L ++ + QQ N ++ G Y + A K+ E Sbjct: 137 VIRANHVGDWGTQFGML-IAYLEKQQQ---ENAGEMALADLEGFYRE------AKKHYDE 186 Query: 221 LLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPI 273 F E +VK +Y +Q K++ DI +S++ + R + + Sbjct: 187 DEAFAERARSYVVKLQGGDEYFLQMWRKLV-----------DITMSQNQITYDRLNVTLT 235 Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF---RSTMVGDDVDRPLLKSDGS 330 RD + + + GI+ K+K + + ++F G+ + + K DG Sbjct: 236 RDDVMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEYKNKEGEPMGVIIQKKDGG 294 Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382 Y Y D+A K +YE D ++Y + S + V++ V +V + Sbjct: 295 YLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFG 354 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416 ++L +DG P K RAG + L ++DE Sbjct: 355 MMLG------KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMSADELENLAK 406 Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 VG +V++ L + + FD+ + + N Y+QYAY R S+FR+A D Sbjct: 407 VVGIGAVKYADLSKNRTTDYVFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKAG---IDE 462 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + + VI ++ E QL L ++ + P+ + YLYDLA +F G Sbjct: 463 NAMIDAPVVIAED-----REAQLAARLLQFEETLSVVAREGTPHVMCAYLYDLAGLFSGF 517 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + H + A + + RL+L A + GL+ +G+E+ M Sbjct: 518 YEH------CPILSAESEETRNSRLKLALLTAKTLKLGLDTLGIETVERM 561 >gi|168705003|ref|ZP_02737280.1| arginyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246] Length = 580 Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 135/558 (24%), Positives = 231/558 (41%), Gaps = 99/558 (17%) Query: 42 HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI 101 +G N AM L + LG P +A+ +VA + + ++ +AG GFINL L P +L + Sbjct: 40 NGDYQANCAMALGKQLGQKPPEVAKALVAALPANDLLEPPTVAGPGFINLRLKPEFLARA 99 Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161 L I + G + K I+ N P+HVGH R ++GD L ++ F G+ V Sbjct: 100 LQEIATD-PKLGVSPAAKSKTFVIDLSGPNVAKPLHVGHLRSTIIGDALVRILRFLGHTV 158 Query: 162 TREYYINDAGAQINT----------------------LALSVFWRYQQALYNNDSDLPEG 199 + ++ D G Q L L +F R Q AL + + EG Sbjct: 159 IGDNHLGDWGTQFGILLYGYKNHRDDAAFAADPVRELLRLYIFVRKQAALAEGEDE--EG 216 Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259 + E + ++ N PE + + K + + A M+++R + L+++ D Sbjct: 217 GADNPVMAACRAETSKLHA----NDPEN--VALWKSF-MPACMEMLRPIYERLDVKIDHA 269 Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEG----ILPPPKSKTTQKCDMDRKQLLFRSTM 315 + E ++ + ++ ++ +G E ++P K Q + +K+ Sbjct: 270 LGESFYN----PMLAGVVADMLAKGIAVESKGAIVIPNAKGIVPQTPEEQKKE------- 318 Query: 316 VGDDVDRPLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA 372 + P + K DG++TY DLA K + E D M+YV+G+ + + K + A A Sbjct: 319 -----EPPAIIRKRDGAFTYTTTDLATIKYRAETWKPDAMLYVVGAPQALHFKTVFAQAK 373 Query: 373 -----AVSEKKAQINVLL--------------CELVRLYRDGMPIKMSKRAGDFITLR-- 411 + + Q +L EL+ L + + + K + R Sbjct: 374 RWGVDGIEFQHVQFGSMLGADRKIFGTRKGGALELMELLNEAAALSLQKYEANTAERRSF 433 Query: 412 -------------HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 + + VG +V++ L + + FD K+ + N Y+QYAY Sbjct: 434 GHKIYEAEASEKQEIAEVVGVGAVKYADLSQNRTTDYVFDLDKMT-ATVGNTAAYMQYAY 492 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 ARCRSIFR+ +D +F R P + +E L +HL P +E A P Sbjct: 493 ARCRSIFREG-----GVDEGVF-RTAPPAVTLPHAAERALALHLLRLPEAVEAAAADYAP 546 Query: 519 YKLAFYLYDLA---SVFH 533 + + YL+DLA SVF+ Sbjct: 547 HLITAYLWDLAKATSVFY 564 >gi|261858632|dbj|BAI45838.1| arginyl-tRNA synthetase [synthetic construct] Length = 660 Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 141/598 (23%), Positives = 255/598 (42%), Gaps = 103/598 (17%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S+ L ++P IAE I + + ++ V IAG GFIN++L + Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDF 170 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + L+S++V+G++ +G+ KV ++F S N MHVGH R ++G++++ L F+ Sbjct: 171 VSEQLTSLLVNGVQLP--ALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFA 228 Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198 GY+V R ++ D G Q L L VF++ + ++ + + + Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESKKRFDTEEEFKK 288 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y V L GK N K ++ D S Q + KI AL++ + Sbjct: 289 RAYQCVVLLQ-GK-----------NPDITKAWKLICDVSRQELNKI----YDALDVS--L 330 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + F++ + DI+ +G+V + D D ++++F + G Sbjct: 331 IERGESFYQ---DRMNDIVKEFEDRGFV--------------QVD-DGRKIVF---VPGC 369 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV--- 374 + ++KSDG YTY +DLA K + +E D +IYV+ + S + + + A A + Sbjct: 370 SIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHFQTIFAAAQMIGWY 429 Query: 375 ----------------SEKKAQINVLLCELVRLYR---DGMPIKMSK---RAGDFI---- 408 E K + E VRL +G+ M K + D + Sbjct: 430 DPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSMDKLKEKERDKVLTAE 489 Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 L V +++ L F F K+ + + N Y+ YA+ R RSI R A Sbjct: 490 ELNAAQTSVAYGYIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA 548 Query: 469 KDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 ++D ++ + + D E +L + +P +++ + L Y+Y+ Sbjct: 549 -----NIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYE 603 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA+ F + + R K+ M R+ L AVA+++ G +I+G++ M Sbjct: 604 LATAFTEFYDSCYCVEKDRQT-GKILKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660 >gi|91794705|ref|YP_564356.1| arginyl-tRNA synthetase [Shewanella denitrificans OS217] gi|123060581|sp|Q12IU3|SYR_SHEDO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|91716707|gb|ABE56633.1| arginyl-tRNA synthetase [Shewanella denitrificans OS217] Length = 581 Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 134/607 (22%), Positives = 249/607 (41%), Gaps = 106/607 (17%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 RI ++R +D HG L+TN AM+L++ G +P +A+LI+ + V V IAG GFIN Sbjct: 29 RIQVDRTKDKTHGDLATNLAMMLTKVAGKNPRELAQLIIDNLPPSSHVAKVEIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 ++ + L L ++ +G L T V +++ S N MHVGH R ++GD++ Sbjct: 89 FFIDDNALATQLEQ-ALNDEHFGITLPEPQTIV-VDYSSPNLAKEMHVGHLRSTIIGDSV 146 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLA--------------------LSVFWRYQQALY 190 + F G++V R+ ++ D G Q L L F+R + + Sbjct: 147 VRALEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAANGEQAQLELSDLETFYRAAKLRF 206 Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250 + +D V V + D+Y ++L + L D + + + R D+ Sbjct: 207 DESTDFATRARQLV----VALQSGDEYCNKLWQEFNDISLSHCHDVYERLGVSLTRADVH 262 Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310 E ++ + + ++ +L +G + E + +++ Sbjct: 263 G----------ESAYN----ADLEQVVKDLDAKGLLSES---------------NGAKVV 293 Query: 311 FRS---TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKR 366 F+ T G+ + + K+DG Y Y +DLA + + + D +Y + + + ++ Sbjct: 294 FQEAFRTKEGEPLPVIIQKADGGYLYATSDLAAMRYRSKVLKADRALYFVDLRQALHFQQ 353 Query: 367 LEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDE--------- 416 + ++A + + + + DG P K R+G + L ++DE Sbjct: 354 VFSLAKLAKFVRKDMQLEHNGFGTMNGEDGRPFKT--RSGGVVKLVDLLDEANNRALELV 411 Query: 417 ------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 VG SV++ L + + F F ++ + N Y+ YAY Sbjct: 412 RSKNPDMDEATLTEIARVVGISSVKYADLSKNRTSDYIFSFEQML-SFEGNTAPYLLYAY 470 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 R IF++A+DI DL ++ + + E +L LA++ + T +P Sbjct: 471 TRVAGIFKRAEDI------DLTDAKIVLEHDK----EKELATKLAQFGETLYKMTDKAQP 520 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 L YLY+LA F + + A+ RL L A+ +N GL+++G Sbjct: 521 NMLCNYLYELAGAFSSFYE------ACPVLAADTPAQQGSRLLLAKLTANTLNKGLSLLG 574 Query: 579 VESPNEM 585 +E+ M Sbjct: 575 IETLERM 581 >gi|163750994|ref|ZP_02158226.1| arginyl-tRNA synthetase [Shewanella benthica KT99] gi|161329284|gb|EDQ00282.1| arginyl-tRNA synthetase [Shewanella benthica KT99] Length = 581 Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 133/604 (22%), Positives = 251/604 (41%), Gaps = 100/604 (16%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 RI ++R +D HG +TN AM+L++ +P IA+LI+ + D V V IAG GFIN Sbjct: 29 RIQVDRTKDKTHGDFATNLAMMLTKIARKNPREIAQLIIDSLPQDSQVAKVEIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 ++ L L + + G L + T V +++ S N MHVGH R ++GD++ Sbjct: 89 FFIDEDALANQLMA-ALKDDHLGICLPEQQTIV-VDYSSPNLAKEMHVGHLRSTIIGDSV 146 Query: 151 ASLMAFSGYEVTREYYINDAG--------------------AQINTLALSVFWRYQQALY 190 + F G++V R+ ++ D G AQ++ L F+R + + Sbjct: 147 VRALEFQGHKVIRQNHVGDWGTQFGMLLAYMEELRAKNGEQAQMDLADLETFYRAAKVRF 206 Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250 + D V V + D+Y ++L + L D + + + R+D++ Sbjct: 207 DESEDFAVRARKLV----VSLQSGDEYCNKLWREFNDISLNHCHDVYARLGVSLTREDVR 262 Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310 E ++ + + +++ L QG + E +K + + K+ Sbjct: 263 G----------ESAYN----ADLAEVVKELKAQGLLSE----SNGAKVVFQDEFKNKE-- 302 Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEA 369 GD + + K+DG Y Y +D+A + + + D ++Y + + + +++ Sbjct: 303 ------GDPLPVIIQKADGGYLYATSDMAAMRYRSKVLNADRVLYFVDLRQALHFQQVFK 356 Query: 370 VAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDE------------ 416 +A + + ++++ + DG P K R+G + L +++E Sbjct: 357 LARKANFVRPELSLEHMGFGTMNGADGRPFKT--RSGGVVKLVDLLNEADTRALELVRSK 414 Query: 417 ---------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461 VG SV++ L + + F F ++ + N Y+ YAY R Sbjct: 415 NPDMDEAELEKIAKVVGISSVKYADLSKNRTSDYIFSFEQML-SFEGNTAPYLLYAYTRV 473 Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 IF++AKDI DL ++ + + E L LA++ V+ +P+ + Sbjct: 474 TGIFKRAKDI------DLSDAKIVLEHDK----EKNLGNKLAQFAEVLSRMVAKGQPHAM 523 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 YL++LA F + P L A RL + A + GL+++G+E+ Sbjct: 524 CAYLFELAGAFSSFYE---ACPVL---AAETEAQKKSRLLIAQLTAKTLKQGLDLLGIET 577 Query: 582 PNEM 585 + M Sbjct: 578 LDRM 581 >gi|289624155|ref|ZP_06457109.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647384|ref|ZP_06478727.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. 2250] gi|330865708|gb|EGH00417.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 578 Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 138/602 (22%), Positives = 248/602 (41%), Gaps = 101/602 (16%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E R+ HG ++N AM+L++P G+ P +AE ++A + D V V IAG GF+N Sbjct: 30 IQVENARNKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + + ++ G +V ++ + N MHVGH R ++GD +A Sbjct: 90 FQN-TAALAARLDAALADAHLSVRKAGAVQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ F G V R+ ++ D G Q L + + + A + SDL E +Y Sbjct: 149 NVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263 A + E F E +VK + A + K +++ H ++ ++ Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLALWTRFKDISLSHCQETYERLNVKLTPA 255 Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 D G+ + + +++++L G + E S Q ++ FR+ DD Sbjct: 256 DVM-GESAYNDDLANVVNDLKATGLLVE-------SNGAQCVFLEE----FRT---ADDT 300 Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374 P++ K+ G Y Y DLA ++ K + D ++Y + + + +++ VA A Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKA-DRVLYFVDQRQALHFQQVFEVARRAGF 359 Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410 Q+ + + RDG +K+ +RA + L Sbjct: 360 VHDGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEAEL 419 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKL-- 476 Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 FD ++ PQE E L LA++ + N P+ L YLYD Sbjct: 477 ---GTSFDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYD 526 Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 LA +F + + G ENP + RL+L + GL+++G+E+ Sbjct: 527 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 576 Query: 584 EM 585 M Sbjct: 577 RM 578 >gi|152970935|ref|YP_001336044.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238895450|ref|YP_002920185.1| arginyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044] gi|166232797|sp|A6TB43|SYR_KLEP7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|150955784|gb|ABR77814.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238547767|dbj|BAH64118.1| arginyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 577 Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 137/590 (23%), Positives = 246/590 (41%), Gaps = 96/590 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE +++ + ++ + V IAG GFIN++L P++ L Sbjct: 37 GDYQANGVMAVAKKLGMAPRQLAEQVLSHLDLNGIANKVEIAGPGFINIFLDPAF----L 92 Query: 103 SSIVVSGIEYGRNLIGK--GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + V ++ R + K + +++ + N MHVGH R ++GD + F G++ Sbjct: 93 ADNVNRALQSERLGVTKPQAQTIVVDYSAPNVAKEMHVGHLRSTIIGDASVRTLEFLGHK 152 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 V R ++ D G Q L ++ + QQ N ++ G Y + A K+ E Sbjct: 153 VIRANHVGDWGTQFGML-IAYLEKQQQ---ENAGEMALADLEGFYRE------AKKHYDE 202 Query: 221 LLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPI 273 F E +VK +Y +Q K++ DI +S++ + R + + Sbjct: 203 DEAFAERARSYVVKLQGGDEYFLQMWRKLV-----------DITMSQNQITYDRLNVTLT 251 Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSDGS 330 RD + + + GI+ K+K + + ++F G+ + + K DG Sbjct: 252 RDDVMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEYKNKEGEPMGVIIQKKDGG 310 Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382 Y Y D+A K +YE D ++Y + S + V++ V +V + Sbjct: 311 YLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFG 370 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416 ++L +DG P K RAG + L ++DE Sbjct: 371 MMLG------KDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMSADELENLAK 422 Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 VG +V++ L + + FD+ + + N Y+QYAY R S+FR+A D Sbjct: 423 VVGIGAVKYADLSKNRTTDYVFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKAG---IDE 478 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + + VI ++ E QL L ++ + P+ + YLYDLA +F G Sbjct: 479 NAMIDAPVVIAED-----REAQLAARLLQFEETLSVVAREGTPHVMCAYLYDLAGLFSGF 533 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + H + A + + RL+L A + GL+ +G+E+ M Sbjct: 534 YEH------CPILSAESEETRNSRLKLALLTAKTLKLGLDTLGIETVERM 577 >gi|323466019|gb|ADX69706.1| Arginyl-tRNA synthetase [Lactobacillus helveticus H10] Length = 568 Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 142/599 (23%), Positives = 253/599 (42%), Gaps = 108/599 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IERP++ G + A IL++ L +P IA+ I + D + S+ G ++N Sbjct: 32 LIERPKNAKMGDYAF-PAFILAKTLRKNPAMIAQDIAENLSSD-NFASIKAVGP-YVNFA 88 Query: 93 LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + L L ++ YG G+G + I+ S N PM +GH R V+G+++A Sbjct: 89 IDHEKLVSSTLKDVLSEKEHYGDQKFGEGN-IPIDMSSPNIAKPMSMGHLRSTVIGNSIA 147 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 M GY + Y+ D G Q L + Y+ + N+ D+ + ++ +V Sbjct: 148 KTMEKVGYTPIKINYLGDYGTQFGKLIAA----YKH--WGNEEDVKKDPIMNLFHYYV-- 199 Query: 212 ELADKYSSELLNFPE-----EKWLPIVKDYSVQA--MMKIIR----DDL----KALNIQH 256 ++ E N PE +W ++D +A + K R +D K L + Sbjct: 200 ----RFHKEAENNPELDDEGREWFKKLEDGDPEAVKLWKWFREVSLEDFKRIYKELGVTF 255 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D + E F+ ++ +ID L +G ++E S+ Q DM Sbjct: 256 DSYNGEAFFN----DKMQPVIDELKEKGLLHE-------SRGAQVVDMGP---------- 294 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV----- 370 D+ ++KSDG+ Y DLA + + E F M+YV+G++ + + L+ V Sbjct: 295 -DENPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQAQHFVELKTVLKKMG 353 Query: 371 ------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412 +S +K + V L ++++ ++ ++ D Sbjct: 354 YDWSDEIHHVPFGLITQGGKKLSTRKGNV-VFLDQVLKDAVSLAKKQIEEKNPDLADKDQ 412 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAK 469 V +VG +V F L KN L +FDF V+ + P YVQY AR +S+ R+A Sbjct: 413 VAHDVGVGAVIFHDL--KNDRLDNFDFALDEVVRFEGDTGP--YVQYTNARAQSVLRKAA 468 Query: 470 DIFPDLDFDLFPRNVIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 + P E +F D + LA++PR+I + EP +A + Sbjct: 469 AM-----------GEKPSEGDFALDDDWAFAVAKDLADFPRIIARSADKFEPSVIAKFAL 517 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 DLA F+ ++++ ++ + +++ RL LV A + ++ L ++GV +P EM Sbjct: 518 DLAKKFNKYYAN------VKILTKDDK--IGARLALVQATSIVLTEALRLLGVNAPKEM 568 >gi|307707761|ref|ZP_07644240.1| arginyl-tRNA synthetase [Streptococcus mitis NCTC 12261] gi|307616259|gb|EFN95453.1| arginyl-tRNA synthetase [Streptococcus mitis NCTC 12261] Length = 563 Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 140/595 (23%), Positives = 248/595 (41%), Gaps = 99/595 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G ++ A + + AEL KI+ +A ++N + Sbjct: 26 LLETPKNSEMGDIAFPAFSLAKVERKAPQMIAAELAE---KINSQAFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + + ++L +++ Y IGK V I+ S N P +GH R V+GD+L+ Sbjct: 83 LDKNAISAQVLQAVITEKEHYADQNIGKQENVVIDMSSPNIAKPFSIGHLRSTVIGDSLS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + GY+ + ++ D G Q L ++ W ++A+ + D LK Sbjct: 143 HIFQKIGYQTVKVNHLGDWGKQFGMLIVAYKKWGDEEAVKAHPID--------ELLKLYV 194 Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267 + A+ + L+ +W ++ D A+ + RD+ L N ++ E D + Sbjct: 195 RINAEAENDPSLDEEAREWFRKLENGDEEALALWQWFRDESLVEFNRLYNELKVEFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + ++D L+ +G + E S+ Q ++++ ++ P Sbjct: 255 GEAFYNDKMDAVVDILSEKGLLVE-------SEGAQVVNLEKY-----------GIEHPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L KSDG+ Y DLA Y K +Y+ F IYV+G + S + K+L+AV + + Sbjct: 297 LIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLKEMGYDWS 354 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 ++ + ++G K+S R G+ I L V E Sbjct: 355 D-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAVSRAKAQIEAKNPGLENKDQVA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +++F L + DFD V + + P YVQYAYAR +SI R+A Sbjct: 412 HAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKAD---- 465 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 F S D ++I + ++PR+I A EP +A + LA F+ Sbjct: 466 ------FKPETAGNYSLNDAESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISLAQAFN 519 Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R E+P RL L +A A ++ L ++GVE+P +M Sbjct: 520 KYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 563 >gi|327260697|ref|XP_003215170.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Anolis carolinensis] Length = 663 Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 145/605 (23%), Positives = 251/605 (41%), Gaps = 116/605 (19%) Query: 43 GHLSTNAAMILSRPL------GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS 96 G N+AM +++ L + P IA+ I I + ++ V IAG GFIN++L Sbjct: 113 GDYQCNSAMSITQMLLKTKEQKISPREIADKIARNIPDNECIEKVEIAGPGFINVHLKKD 172 Query: 97 YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 ++ + LSS++V+G++ IG+ +V ++F S N MHVGH R ++GD++ L F Sbjct: 173 FVSRQLSSLLVNGVQ--PPAIGERKRVVVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEF 230 Query: 157 SGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLP 197 GY+V R ++ D G Q L L F++ + ++ + + Sbjct: 231 VGYDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKRRFDTEEEFK 290 Query: 198 EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257 + Y V L L K + E + K ++ D S Q KI L+I Sbjct: 291 KRAYQCVVL------LQSK-NPEFI-----KAWKLICDVSRQEFQKI----YDCLDIS-- 332 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 + + + D P DI+ L +G V + D D ++++F + G Sbjct: 333 -LVERGESYYQDMMP--DIVKELEEKGVV--------------QLD-DGRKIVF---VPG 371 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 + ++KSDG +TY +DLA K + E D++IYV+ S S +++ + A A V Sbjct: 372 CSIPLTIVKSDGGFTYDTSDLAAIKQRLLEEKADSIIYVVDSGQSVHLQTIFAAAQMVGW 431 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416 Q+ ++ + K R+GD + L +++E Sbjct: 432 YDPQVTRVVHAPFGVVLGEDKKKFKTRSGDTVRLIDLLEEGLKRSMDKLKEKERDKVLTP 491 Query: 417 ----VGSDSVRFMMLW-------RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 SV F + R N + FD K+ + + N Y+ YA+ R RSI Sbjct: 492 EELKAAQTSVAFGCIKYSDLSHNRINDYIFSFD--KMLD-DRGNTAAYLLYAFTRIRSIA 548 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R A +D E D E +L + +P +I+ + L Y Sbjct: 549 RLA-----SIDEKTLQTAARTTEIILDHEKEWKLGRCILRFPEIIQKILDDLLLHTLCDY 603 Query: 525 LYDLASVFHGHWSHG----RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 LY+LA+ F + ++ + V+ N M R+ L A A+++ G +I+G++ Sbjct: 604 LYELATTFTEFYDSCYCVEKDRQTGKIVKVN-----MWRMLLCEATAAVMAKGFDILGIK 658 Query: 581 SPNEM 585 +M Sbjct: 659 PVQKM 663 >gi|330938645|gb|EGH42211.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B] Length = 578 Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 138/602 (22%), Positives = 247/602 (41%), Gaps = 101/602 (16%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++ G+ P +AE ++A + D V V IAG GF+N Sbjct: 30 IQVENARDKTHGDFASNIAMMLAKSAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + + ++ G +V ++ + N MHVGH R ++GD +A Sbjct: 90 FQN-TAALAARLDAALADAHLSVRKAGAAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ F G V R+ ++ D G Q L + + + A + SDL E +Y Sbjct: 149 NVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263 A + E F E +VK + A + K +++ H ++ ++ Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLALWTRFKDISLSHCQETYERLNVKLTPA 255 Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 D G+ + + +++++L G + E S Q ++ FR+ DD Sbjct: 256 DVM-GESAYNDDLANVVNDLKATGLLVE-------SNGAQCVFLEE----FRTA---DDT 300 Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374 P++ K+ G Y Y DLA ++ K + D ++Y + + + +++ VA A Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKA-DRVLYFVDQRQALHFQQVFEVARRAGF 359 Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410 Q+ + + RDG +K+ +RA + L Sbjct: 360 VHDGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEAEL 419 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKLGS 478 Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 FD ++ PQE E L LA++ + N P+ L YLYD Sbjct: 479 A-----FDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYD 526 Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 LA +F + + G ENP + RL+L + GL+++G+E+ Sbjct: 527 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 576 Query: 584 EM 585 M Sbjct: 577 RM 578 >gi|186895396|ref|YP_001872508.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+] gi|238691368|sp|B2K312|SYR_YERPB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|186698422|gb|ACC89051.1| arginyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+] Length = 576 Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 137/594 (23%), Positives = 240/594 (40%), Gaps = 105/594 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE +V + + + IAG GFIN++L + Sbjct: 37 GDYQANGVMAVAKKLGMQPRQLAERVVELLDLTGIASKIEIAGPGFINIFLDRQW----- 91 Query: 103 SSIVVSGIEYGRNLIGKGT------KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 V +EY G + +++ + N MHVGH R ++GD +AF Sbjct: 92 ---VAEKVEYALTAPKLGVAPVEPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAF 148 Query: 157 SGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPE 198 G+ V R ++ D G Q L L +F YQQA D D Sbjct: 149 LGHNVIRANHVGDWGTQFGMLIAYLEKMQNENASDMGLSDLELF--YQQAKKTYDEDEEF 206 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y+ V + D+Y ++ W +V D ++ A ++ D L + + D Sbjct: 207 ALRARAYV--VKLQSGDEYCRQM-------WRKLV-DITM-AQNQVAYDRLN-VTLTKDD 254 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + E ++ P +I+ +L +G E + T D + + G+ Sbjct: 255 VMGESLYNAMLP----EIVADLKAKGLAVE-----SEGATVVYLDEYKNK-------DGE 298 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370 + + K DG Y Y D+A K +YE G D ++Y + S + V++ V Sbjct: 299 PMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRILYYIDSRQHQHLMQAWTIVRKAGYV 358 Query: 371 AAAVSEKKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LR 411 +V + ++L + + + R G +K+S +RAG I L+ Sbjct: 359 PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLDEAVERAGKLIAEKNPDMPADELK 418 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 V++ VG +V++ L + + FD+ + N Y+QYAY R S+FR+A Sbjct: 419 QVINAVGIGAVKYADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSVFRRAGVD 477 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 L L VI ++ E L L ++ +I P+ + YLYD+A + Sbjct: 478 ETSLTLPL----VITEDRE-----AALATRLLQFEEIITTVAREGTPHVMCSYLYDVAGL 528 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + H + + A + ++ RL+L A + GL+ +G+++ M Sbjct: 529 FSSFYEH------CQILNAESEEIRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 576 >gi|322390459|ref|ZP_08063979.1| arginine--tRNA ligase [Streptococcus parasanguinis ATCC 903] gi|321142858|gb|EFX38316.1| arginine--tRNA ligase [Streptococcus parasanguinis ATCC 903] Length = 562 Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 149/605 (24%), Positives = 249/605 (41%), Gaps = 120/605 (19%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E+P+ G ++ A L++ P IA I KID +A ++N + Sbjct: 26 LLEQPKSSDLGDIAF-PAFSLAKVERKAPQAIAADIAE--KIDQSAFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + +++ S++ +G +YG+ G G + I+ S N P VGH R V+GD L+ Sbjct: 83 LDKSKISDQVIKSVIEAGADYGQQDEGNGQNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY + ++ D G Q L ++ W ++A+ N D Sbjct: 143 NIFRKMGYNTIKINHLGDWGKQFGLLMVAYKKWGSKEAVEANPID--------------- 187 Query: 211 KELADKY---SSELLNFPE-----EKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIF 259 EL Y ++E+ N PE KW ++D +A + + RD+ L N + + Sbjct: 188 -ELLKLYVRINAEIENDPELDEEGRKWFKKLEDGDPEATELWQWFRDESLVEFNRIYKLL 246 Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319 E D G+ + D +D A Q +G+L K + + DD Sbjct: 247 GVEFDSLNGE-AFYNDKMDE-AVQILEDKGLLKESKGASIVEL---------------DD 289 Query: 320 VDRP---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373 V+ P + KSDG+ Y D+A Y Y F IY +G + S + ++L+AV Sbjct: 290 VNLPPAMIKKSDGATLYITRDIATAIYRARTY--NFVKNIYAVGQEQSNHFRQLKAVLKK 347 Query: 374 V----SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------- 416 + S+ ++ L R K+S R G+ I L + E Sbjct: 348 MGFDWSDDMVHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLQEAISRAKAQIEEKN 400 Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRS 463 VG +V+F L DFD V + + P YVQYAYAR +S Sbjct: 401 PELENKEEVAHAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YVQYAYARIQS 458 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+A F + S D ++I L ++ RV++ A +P +A Sbjct: 459 ILRKAN----------FTPSTDATYSLSDPESWEIIKLLQDFSRVVKRAAENYDPSLIAK 508 Query: 524 YLYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 Y +LA F+ +++H R E+P RL L ++ A ++ L ++GV+ Sbjct: 509 YAINLAQAFNKYYAHTRILDESPERE-----------SRLALSYSTAVVLKEALRLLGVD 557 Query: 581 SPNEM 585 +P +M Sbjct: 558 APEKM 562 >gi|586063|sp|P37880|SYRC_CRIGR RecName: Full=Arginyl-tRNA synthetase, cytoplasmic; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|478315|pir||JN0870 arginine-tRNA ligase (EC 6.1.1.19) - Chinese hamster gi|433544|emb|CAA45012.1| arginine--tRNA ligase [Cricetulus longicaudatus] Length = 661 Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 151/631 (23%), Positives = 277/631 (43%), Gaps = 96/631 (15%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDR--IVIERPRDCAHGHLSTNAAMILSRPLG----- 58 + +SRL++ C IK LD +V+ + G N+AM +S+ L Sbjct: 76 NINSRLQDVF---GCAIKAAYPDLDNPPLVVTPSQQPKFGDYQCNSAMGISQMLKAKEQK 132 Query: 59 LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 ++P IAE I + + +D V IAG GFIN++L ++ + L++++V+GI+ +G Sbjct: 133 VNPRGIAENITKHLPNNEYIDRVEIAGPGFINVHLRKDFVSEQLTNLLVNGIQLP--ALG 190 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 + KV ++F S N MHVGH R ++G++++ L F+GY+V R ++ D G Q L Sbjct: 191 ENKKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRLNHVGDWGTQFGMLI 250 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 + ++ L + P G Y KE ++ +E F + + +V S+ Sbjct: 251 AHLQDQFPDYLTVSP---PIGDLQAFY-----KESKKRFDTE-EEFKKRAYQCVV---SL 298 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDD----------FHRGDP---SPIRDIIDNLARQGY 285 Q+ D +KA N+ D+ +E + RG+ ++DI+ +GY Sbjct: 299 QSKDP---DFIKAWNLICDVSRAEFNKIYDALDITLIERGESFYQDRMKDIVKEFEDKGY 355 Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK- 344 V + D D ++++F + G + ++KSDG +TY +DLA K + Sbjct: 356 V--------------QVD-DGRKIVF---VPGCSIPLTIVKSDGGFTYDTSDLAAIKQRL 397 Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAVS---EKKAQIN-----VLLCE--------- 387 +E + +IYV+ + + + + + A A + K Q+ V+L E Sbjct: 398 FEEKANKIIYVVDNGQAVHFQTIFAAAQMIGWYDPKVTQVTHVGFGVVLGEDKKKFKTRS 457 Query: 388 -----LVRLYRDGMPIKMSK---RAGDFI----TLRHVVDEVGSDSVRFMMLWRKNSELL 435 LV L +G+ M K + D + L + +++ L Sbjct: 458 GETVRLVDLLGEGLKRSMDKLKEKERDKVLTEEELTAAQTSIAYGCIKYADLSHNRLNDY 517 Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TS 494 F F K+ + + N Y+ YA+ R RSI R A ++D ++ + + D Sbjct: 518 IFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NVDEEMLQKAARETKIVLDHEK 571 Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554 E +L + +P +++ + L Y+Y+LA+ F + + R K Sbjct: 572 EWKLGRCILRFPEILQKMLDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQT-GKVLK 630 Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + M R+ L AVA+++ G +I+G++ M Sbjct: 631 VNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 661 >gi|256843725|ref|ZP_05549213.1| arginyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN] gi|256615145|gb|EEU20346.1| arginyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN] Length = 561 Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 140/596 (23%), Positives = 253/596 (42%), Gaps = 102/596 (17%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IERP++ G + A IL++ L +P IA+ I + D D ++ G ++N Sbjct: 25 LIERPKNAKMGDYAF-PAFILAKTLHKNPAEIAKNIADNLSSD-DFANIQAVGP-YVNFA 81 Query: 93 LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + L L ++ YG IG+G V I+ S N PM +GH R V+G+++A Sbjct: 82 IDHEKLVSSTLKDVLTEKEHYGDQKIGEGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 M GY + Y+ D G Q L + Y+ + N+ D+ + ++ +V Sbjct: 141 KTMEKVGYTPIKINYLGDYGTQFGKLIAA----YKH--WGNEEDVKKDPIMNLFHYYVKF 194 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAM----------MKIIRDDLKALNIQHDIFIS 261 + + EL N E W ++D +A+ +K + K L + D + Sbjct: 195 HQEAEKNPELDNEGRE-WFKKLEDGDPEAVKLWKWFREVSLKDFKRIYKELGVTFDSYNG 253 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E F+ ++ +ID L +G ++E S+ Q DM + Sbjct: 254 EAFFN----DKMQPVIDELKEKGLLHE-------SRGAQVVDMGEGE------------- 289 Query: 322 RP--LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV-------- 370 P ++KSDG+ Y DLA + + E F M+YV+G++ + + L+ V Sbjct: 290 NPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQAQHFVELKTVLKKMGYDW 349 Query: 371 ---------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 +S +K + V L ++++ ++ ++ D V Sbjct: 350 ADEIHHVPFGLITQGGKKLSTRKGNV-VFLDQVLKDAVSLAKKQIQEKNPDLADQDQVAH 408 Query: 416 EVGSDSVRFMMLWRKNSELLDFDF---CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 +VG +V F L KN L +FDF V+ + P YVQY AR +S+ R+A + Sbjct: 409 DVGVGAVVFHDL--KNDRLDNFDFDLEEVVRFEGDTGP--YVQYTNARAQSVLRKAAAMG 464 Query: 473 PDLDFDLFPRNVIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 + P E++ D + LA++PR++ + EP +A + DLA Sbjct: 465 EN-----------PSETDLALDDDWAFAVAKDLADFPRIVARSAEKFEPSVIAKFALDLA 513 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ ++++ ++ + +++ RL LV A + ++ L ++GV +P EM Sbjct: 514 KKFNKYYAN------VKILTKDDK--IGARLALVQATSIVLTESLRLLGVNAPKEM 561 >gi|294788151|ref|ZP_06753394.1| arginine--tRNA ligase [Simonsiella muelleri ATCC 29453] gi|294483582|gb|EFG31266.1| arginine--tRNA ligase [Simonsiella muelleri ATCC 29453] Length = 567 Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 133/596 (22%), Positives = 245/596 (41%), Gaps = 105/596 (17%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 IV++ P+D HG N M ++ +G +P +A+ I + +AG GF+NL Sbjct: 25 IVLQSPKDAKHGDFQINGVMGAAKKVGQNPRELAQKIADELNGKGAFAGAEVAGLGFVNL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGT--KVNIEFVSANPTGPMHVGHCRCAVVGDT 149 LSP +L + LS + N+ T + I++ S N MHVGH R +++GD+ Sbjct: 85 RLSPEFLAQQLSGSL--------NIEKTATPNTIVIDYSSPNLAKEMHVGHLRSSIIGDS 136 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLK 207 ++ ++ F G++V R+ ++ D G Q L V + +Q N + L E +Y ++ Sbjct: 137 ISRVLEFLGHKVIRQNHVGDWGTQFGML---VAYLVEQQKDNAEFKLADLEQFYRNAKIR 193 Query: 208 H----VGKELADKYSSELLNFPE------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257 +LA +Y +L + E +++ I ++ + K+ L +Q Sbjct: 194 FDEDAAFADLAREYVVKLQSGDEAVLALWRQFVEISLQHAEEVYAKL------GLKLQRA 247 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV- 316 E ++ + + ++I+ L +G D D +++F Sbjct: 248 DVAGESSYN----ADLHNVINELEAKGLA---------------VDSDGAKVVFLDEFKN 288 Query: 317 --GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAA 373 G+ + K G + Y D A + + + G ++YV+ + + K+L + Sbjct: 289 KEGEPAAFIVQKQGGGFLYATTDFACMRYRVGKLGGTRLLYVVDTRQDLHFKQLFTASRK 348 Query: 374 VSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 ++ + +DG P K R+GD + L ++DE + + ++ KN Sbjct: 349 AGWLPENVSAEFIGFGTMMSKDGKPFKT--RSGDTVKLVDLLDEAVERATK--LVRDKNP 404 Query: 433 ELLDFDFCKVKEQ-----------SKE-----------------NPVFYVQYAYARCRSI 464 +L D D K+ E SK N Y+QYAY R +S+ Sbjct: 405 KLSDLDAVKIGETVGIGAVKYADLSKNRTSDYVFDWDNMLSFEGNTAPYLQYAYTRVQSV 464 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 F++ D NV E QL V L ++ V+++ P+ LA Y Sbjct: 465 FKKVGDW-----------NVQAALKLEQPLEQQLAVELLKFEDVLQSVAETSFPHYLANY 513 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 LY LA++F + P L+ + + R RL+L + GL+++G++ Sbjct: 514 LYQLATLFSRFY---EACPILK-AEGDVRD---SRLKLAQLTGETLKMGLDLLGID 562 >gi|312868747|ref|ZP_07728939.1| arginine--tRNA ligase [Lactobacillus oris PB013-T2-3] gi|311095733|gb|EFQ53985.1| arginine--tRNA ligase [Lactobacillus oris PB013-T2-3] Length = 562 Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 146/608 (24%), Positives = 261/608 (42%), Gaps = 114/608 (18%) Query: 26 KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85 ++I+D+I ERP+D +G + L++ L P IA +V +I + V +AG Sbjct: 21 EEIVDKI--ERPKDANNGDYAF-PTFFLAKTLHKAPQMIAADLVEKID-QAGFEKVVVAG 76 Query: 86 KGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 +IN +L + + +I+ +I+ YG+ +G G V I++ S N PM +GH R Sbjct: 77 P-YINFFLDKAQVGAEIIKAILADPAGYGKKDLGHGANVTIDYSSPNIAKPMGMGHLRST 135 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQALYNNDSDLPEGYYPG 203 ++G+ +A ++A Y R Y+ D G Q L A W ++ + + + YY Sbjct: 136 MIGEAIARILAKENYTPVRIDYLGDWGTQFGKLMAAYKMWGSEEEVKKDPINTLLKYYVR 195 Query: 204 VYLK--------HVGKELADKYSSELLNFPEEKW--LPIVKDYSVQAMMKIIRDDLKALN 253 + + G+E + ++L + +E W + S++ K+ L+ Sbjct: 196 INTEAEEHPEYTDAGRE----WFAKLEHGDKEAWRLWHWFRQISIERFQKV----YDMLD 247 Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313 + D F E + PI+ + D + S+ Q D+D +L Sbjct: 248 VHFDSFNGEAFSAQKMDDPIQLLKDKHLLKA-----------SRGAQIVDLDAYKLT--- 293 Query: 314 TMVGDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369 PL +KS+G+ TY DLA Y K + G +YV+G++ Y K+L+A Sbjct: 294 --------PPLIIKSNGTTTYITRDLATALYRKRMF--GHAKSLYVVGAEQENYYKQLKA 343 Query: 370 VAAAVS----EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD---------- 415 V + ++ I+ L L +G KMS R G+ + L V++ Sbjct: 344 VLKEMGFTWWDQLEHISFGLMNL-----NGQ--KMSTRKGNVVNLEDVLNDSIKLARQQI 396 Query: 416 ---------------EVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYA 459 +VG +V F L ++F VK + + P YVQYA A Sbjct: 397 AEKNPDLPNADEVAKQVGVGAVIFHDLKNDRRNAVNFKLEDVVKFEGETGP--YVQYARA 454 Query: 460 RCRSIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 R SI R+ +D F ++D + + ++ L +Y V+E A + + Sbjct: 455 RAESILRKGGIRD-FSNVDL-----------TTVGDAAWDILSFLGQYSDVVERAAVNYD 502 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 P +A Y +L+ F+ +++H R +Q + + RL LV AV+ ++ L ++ Sbjct: 503 PSVIAKYALELSKKFNQYYAHN------RILQDDEGQPA--RLALVQAVSHVLKDALAML 554 Query: 578 GVESPNEM 585 +++P+EM Sbjct: 555 DIKAPDEM 562 >gi|238792571|ref|ZP_04636204.1| Arginyl-tRNA synthetase [Yersinia intermedia ATCC 29909] gi|238728206|gb|EEQ19727.1| Arginyl-tRNA synthetase [Yersinia intermedia ATCC 29909] Length = 576 Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 135/582 (23%), Positives = 246/582 (42%), Gaps = 81/582 (13%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + + V IAG GFIN++L ++ + + Sbjct: 37 GDYQANGVMAVAKKLGMQPRQLAEKVIELLDLSGIASKVEIAGPGFINIFLDRQWVAEKV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 ++ + G + T V +++ + N MHVGH R ++GD + F G+ V Sbjct: 97 EH-ALTAPKLGVAPVEPQTIV-VDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGKELADKYSSEL 221 R ++ D G Q L Y + + N N SD+ G+ + + A K E Sbjct: 155 RANHVGDWGTQFGMLI-----AYLEKMQNENASDM------GLSDLELFYQQAKKTYDED 203 Query: 222 LNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHD---IFISEDDFHRGDP--- 270 F + +VK +Y Q K++ + I +D + +++DD G+ Sbjct: 204 EEFAQRARAYVVKLQGGDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTKDDVM-GESLYN 262 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + + I+ +L +G E + T D + + G+ + + K DG Sbjct: 263 AMLPGIVADLKAKGLAVE-----SEGATVVYLDEYKNK-------DGEPMGVIIQKKDGG 310 Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382 Y Y D+A K +YE G D ++Y + + + V++ V +V + Sbjct: 311 YLYTTTDIACAKYRYETLGADRVLYYIDTRQHQHLMQAWTIVRKAGYVPESVPLEHHMFG 370 Query: 383 VLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LRHVVDEVGSDSVR 423 ++L + + + R G +K++ +RAG I L+ VVD VG +V+ Sbjct: 371 MMLGKDGKPFKTRSGGTVKLADLLDEAIERAGKLIAEKNPDMPADELKQVVDAVGIGAVK 430 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + L + + FD+ + N Y+QYAY R S+F++A +L L Sbjct: 431 YADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSVFKRAGIDESNLTLPL---- 485 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 VI ++ E L L ++ VI P+ + YLYDLA +F + H Sbjct: 486 VITEDRE-----AALATRLLQFEEVITTVAREGTPHVMCSYLYDLAGLFSSFYEH----- 535 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + A + ++ RL+L A + GL+ +G+++ M Sbjct: 536 -CQILNAESEEIRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 576 >gi|262283658|ref|ZP_06061423.1| arginyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA] gi|262260715|gb|EEY79416.1| arginyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA] Length = 562 Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 150/606 (24%), Positives = 251/606 (41%), Gaps = 122/606 (20%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E+P+ G ++ A L++ P IA IV +I D V G ++N + Sbjct: 26 LLEQPKSSDLGDIAF-PAFSLAKVERKAPQAIAADIVEKIDT-THFDKVVATGP-YVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+ + + +++ +V G +YG+ GKG V I+ S N P VGH R V+GD L+ Sbjct: 83 LNKAEISGQVIKEVVKEGADYGQQNEGKGENVTIDLSSPNIAKPFSVGHLRSTVIGDALS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY + ++ D G Q L ++ W ++A+ N D Sbjct: 143 NIFRKMGYNTIKINHLGDWGKQFGLLMVAYKKWGSKEAVEANPID--------------- 187 Query: 211 KELADKY---SSELLNFPE-----EKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIF 259 EL Y ++E+ N P W ++D +A + + RD+ L N +++ Sbjct: 188 -ELLQLYVRINAEIENDPALDDEGRLWFKKLEDGDPEATELWQWFRDESLVEFNRIYELL 246 Query: 260 ISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 E D G+ + + I L +G + E SK ++D Sbjct: 247 GVEFDSLNGEAFYNDKMDEGIKILEEKGLLEE-------SKGASIVNLD----------- 288 Query: 317 GDDVDRP---LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA 372 DV+ P + KSDG+ Y D+A + F IYV+G + S + ++L+AV Sbjct: 289 --DVNLPPAMIKKSDGATLYITRDIATAMYRARTYNFVKSIYVVGQEQSNHFRQLKAVLK 346 Query: 373 AV----SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416 + S+ ++ L R K+S R G+ I L + E Sbjct: 347 KMGFDWSDDMTHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLQEAISRAKSQIEDK 399 Query: 417 -------------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCR 462 VG +V+F L DFD V + + P Y+QYAYAR + Sbjct: 400 NPELENKEAVAHAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQ 457 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 SI R+A D PD + D + N D ++I L ++ RV++ A EP +A Sbjct: 458 SILRKA-DFTPDANAD-YRLN--------DAESWEIIKLLQDFGRVVKRAADNYEPSLIA 507 Query: 523 FYLYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 Y LA F+ +++H R E+P RL L ++ A ++ L ++GV Sbjct: 508 KYAISLAQAFNKYYAHTRILDESPERD-----------SRLALSYSTAVVLKEALRLLGV 556 Query: 580 ESPNEM 585 ++P +M Sbjct: 557 DAPEKM 562 >gi|327440673|dbj|BAK17038.1| arginyl-tRNA synthetase [Solibacillus silvestris StLB046] Length = 559 Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 154/595 (25%), Positives = 259/595 (43%), Gaps = 103/595 (17%) Query: 33 VIERPRDCAHGHLSTNA--AMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 ++ERP+ + HL A L++ L P IA I IK D + V + G G+IN Sbjct: 26 LLERPK---YQHLGDIAFPCFTLAKSLKKAPNVIAIEIGDNIKSDF-IQEVHVVG-GYIN 80 Query: 91 LYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 L+L+ R +++ I+++ YG+ I + V I+F S N P +GH R V+G+ Sbjct: 81 LFLNKLQVTRDVMAKIMIAHESYGQQEIQQKNIV-IDFSSPNIAKPFSMGHLRSTVIGNA 139 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 LA++ +GY V R ++ D G Q L L F + + S + E LK Sbjct: 140 LANIAEKNGYNVIRVNHLGDWGTQFGKL-LVAFQLWGEKERVQQSPIEE------LLKLY 192 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 K + +++ LN ++D QAM + K+ ++Q Sbjct: 193 VKFHDEAETNKSLNEEARSAFKALEDNDPQAMA--LWTWFKSASLQE------------- 237 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS--TMVGDDVDRP---L 324 + I + L Q YEG + + ++ +KQLL S V + D P + Sbjct: 238 ---FKQIYEQLHIQFDTYEGEAFYNEKMQSVVDELKKKQLLTESDGANVVELEDMPPCLI 294 Query: 325 LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381 K DG+ Y DLA Y + +YE + YV+G++ + + K++ V + + + Sbjct: 295 TKQDGATLYATRDLAAAFYRQAQYEPS--QVFYVVGNEQTLHFKQVFQVISKMGYPWSG- 351 Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLR-------------------------HVVDE 416 N+ + +DG KMS R G I L+ +V D+ Sbjct: 352 NLKHVPFGMMLKDGK--KMSTRKGRVILLKDVLKEAVETASRNIEEKNPTLNNKQNVADQ 409 Query: 417 VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +V F L KN L D +F + + + P YVQY +AR SI +AK Sbjct: 410 VGIGAVIFNDL--KNFRLNDIEFSLPQMLNFEGETGP--YVQYTHARIHSILEKAK---- 461 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 + + E + S ++I L +YP+VI ++ +P +A Y+ LA +F+ Sbjct: 462 ------YTASNEVTVMELENSAWEVIKLLQQYPQVITDSFEQVDPSLIAKYVLQLARIFN 515 Query: 534 GHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++++ + E+ +L RLQL AVA+++ GL ++G++SP M Sbjct: 516 KYYANTKILVEDEQLE-----------SRLQLCFAVATVLKDGLKLLGIKSPESM 559 >gi|90077298|dbj|BAE88329.1| unnamed protein product [Macaca fascicularis] Length = 588 Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 140/607 (23%), Positives = 256/607 (42%), Gaps = 121/607 (19%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S+ L ++P IAE I + + ++ V IAG GFIN++L + Sbjct: 39 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDF 98 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + L+S++V+G++ +G+ KV ++F S N MHVGH R ++G++++ L F+ Sbjct: 99 VSEQLTSLLVNGVQL--PAVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFA 156 Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198 GY+V R ++ D G Q L L F++ + ++ + + + Sbjct: 157 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKK 216 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y V L GK N K ++ D S Q KI AL++ + Sbjct: 217 RAYQCVVLLQ-GK-----------NPDITKAWKLICDVSRQEFNKI----YDALDVS--L 258 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + F++ + DI+ +G+V + D D ++++F + G Sbjct: 259 IERGESFYQ---DRMNDIVQEFEDRGFV--------------QVD-DGRKIVF---VPGC 297 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 + ++KSDG YTY +DLA K + E D +IYV+ S S + + + A A + Sbjct: 298 SIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYVVDSGQSVHFQTIFAAAQMIGWY 357 Query: 378 KAQINVLLCELVRLYRDGMPI-------KMSKRAGDFITLRHVVDE-------------- 416 ++ R++ G + K RAG+ + L ++ E Sbjct: 358 DPKVT-------RVFHAGFGVVLGEDKKKFKTRAGETVRLMDLMGEGLKRSMDKLKEKER 410 Query: 417 ----------VGSDSVRFMMLW-------RKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459 V S+ + + R N + FD K+ + + N Y+ YA+ Sbjct: 411 DKVLTAEELNVAQTSIAYGCIKYADLSHNRLNDYIFSFD--KMLD-DRGNTAAYLLYAFT 467 Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEP 518 R RSI R A ++D ++ + + D E +L + +P +++ Sbjct: 468 RIRSIARLA-----NIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFL 522 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 + L Y+Y+LA+ F + + R K+ M R+ L AVA+++ G +I+G Sbjct: 523 HTLCDYIYELATTFTEFYDSCYCVEKDR-QTGKILKVNMWRMLLCEAVAAVMAKGFDILG 581 Query: 579 VESPNEM 585 ++ M Sbjct: 582 IKPVQRM 588 >gi|332637432|ref|ZP_08416295.1| arginyl-tRNA synthetase [Weissella cibaria KACC 11862] Length = 561 Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 153/604 (25%), Positives = 270/604 (44%), Gaps = 105/604 (17%) Query: 25 EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84 E IL +I E P+D G + +L++ + P IA + I D +V A Sbjct: 20 EATILSKI--EVPKDSTMGDFAF-PTFLLAKERHMAPNQIAATVAEAIDA-TDFKAVQAA 75 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 G ++N +L+ + V+ ++G N G+ V I+ S N PM +GH R Sbjct: 76 GP-YVNFFLNQLTFGTDVLQTVLMNQDFGHNTDGEAGHVTIDMSSPNIAKPMSMGHLRST 134 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYYP 202 V+G++LA + +GY+ + ++ D G Q L +S + W + + + + YY Sbjct: 135 VIGNSLAEISKANGYQPIKINHLGDWGTQFGKL-ISAYKRWGSEDEVKADPINTLVKYY- 192 Query: 203 GVYLKHVGKE---LADK---YSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDDLKALNI 254 V KE L D+ + +L + EE + ++ S++ M++ + L+I Sbjct: 193 -VRFHEEAKENPALDDEGRAWFKKLEDGDEEARQLWSWFREESLKEFMEL----YETLDI 247 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 + D F E ++ + +ID L +G + E S+ Q D+++ L Sbjct: 248 EFDSFNGEAFYN----DKMDGVIDTLKEKGLLIE-------SQGAQVVDLEKYNL--NVA 294 Query: 315 MVGDDVDRPLLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371 M+ ++DG+ Y DLA + K Y F +YV+G + + +L+AV Sbjct: 295 MIQ--------RTDGATLYMTRDLAAAIFRKKNY--NFVKSLYVVGGEQREHFMQLKAVL 344 Query: 372 AAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD--------------- 415 + E + + L+ + DG K+S R+G I L+ V+ Sbjct: 345 KEMGYEWSDDVEHIPFGLITV--DGK--KLSTRSGRIILLKDVLKDSVDLALQQINEKNP 400 Query: 416 ----------EVGSDSVRFMMLWRKNSELLDFDFCKVKE----QSKENPVFYVQYAYARC 461 EVG+ +V F L N + +FDF K++E + P YVQYA AR Sbjct: 401 TLGNKELVAHEVGTGAVVFHDL--MNERIGNFDF-KLEEVVRFEGDTGP--YVQYANARA 455 Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 +SI R+A + P+LD VI E+ ++T +L LA++ V+ A +EP + Sbjct: 456 QSILRKAGN--PELDMSNL---VIDDENVWETEKL-----LADFGDVVRRAWRDREPSVI 505 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 A Y +L+ F+ ++++ + + A + +L RL LV AV+ ++ L ++GV++ Sbjct: 506 AKYALNLSRTFNKYYANSK-------ILAEDEQLN-ARLALVTAVSQVLTESLRLLGVKA 557 Query: 582 PNEM 585 P EM Sbjct: 558 PKEM 561 >gi|330507292|ref|YP_004383720.1| arginyl-tRNA synthetase [Methanosaeta concilii GP-6] gi|328928100|gb|AEB67902.1| arginyl-tRNA synthetase [Methanosaeta concilii GP-6] Length = 560 Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 143/570 (25%), Positives = 242/570 (42%), Gaps = 94/570 (16%) Query: 3 LFADFSSRLKNYLKEI--DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 +F DF S ++ LK C E+ I + P H L+++ A L+ L Sbjct: 1 MFLDFMSEVEGLLKSALDRCGFAPEEGINSLGLELTP----HADLASSVAFRLAPVLKKS 56 Query: 61 PLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA I I + V+ V +AG ++N +++ ++L +L+ + GR Sbjct: 57 PAAIAGEIHQAIPHEFRYVEKVELAGP-YLNFFMNRAFLNAVLNQALADNAWTGR----M 111 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 KV +E SANP GP+HVGH R +V+GDTL ++ +G V +YY+ND G Q + + Sbjct: 112 NEKVIVEHTSANPDGPLHVGHIRNSVIGDTLVRILRRAGCTVDAQYYVNDMGRQEAMVVV 171 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYL---KHVGKELADKYSSELLNFPEEKWLPIVK-- 234 + + D P+ VY+ K + A + ++ + E P V Sbjct: 172 GL------DHFQLDGSKPDHAIARVYIAANKEMESNPAIREEADRVIQLYEAGDPEVTAK 225 Query: 235 -DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY--EGIL 291 +V+ + I L+ +NI HD + E +F R + +I+++L + G V EG L Sbjct: 226 VQSAVRYAIGGIEQTLQRMNICHDSYHWESEFVR--DGSVAEIVESLEKTGLVAWDEGSL 283 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351 +D F MV L +++G+ Y DLAY + K D Sbjct: 284 -----------QLDLNDYGFEKKMV-------LKRANGTSLYITRDLAYHRWKSANS-DR 324 Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI-KMSKRAGDFIT- 409 + ++G+DH +L + ++ + V++ E V L P MS R G FI+ Sbjct: 325 SVDILGADHKLVSGQLRVALGLLGVREPE--VVIFEFVSL-----PTGSMSTRKGKFISA 377 Query: 410 --------------------------LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443 L+ V +V S +VR+ ++ + FD+ + Sbjct: 378 DELLDEVEKQAMEEVRARRPDESPEFLKEVARQVASGAVRYDVVKVSADKATTFDWKQAL 437 Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503 + K + F +QY++AR SI R+ + DL + E+ LI +A Sbjct: 438 DFEKLSAPF-IQYSHARACSILRKGEQ-SEKFQADLLVSDY----------EVALIKKIA 485 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFH 533 ++ VI+ A +P+ LA Y +LA F+ Sbjct: 486 QFDLVIDRAACELKPHHLATYARELAESFN 515 >gi|145635709|ref|ZP_01791404.1| arginyl-tRNA synthetase [Haemophilus influenzae PittAA] gi|145267032|gb|EDK07041.1| arginyl-tRNA synthetase [Haemophilus influenzae PittAA] Length = 577 Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 141/592 (23%), Positives = 244/592 (41%), Gaps = 100/592 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LGL+P A+ ++ +++ + + IAG GFIN++L+P++L + Sbjct: 37 GDYQANGIMAAAKKLGLNPREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 S+ +S G K T V I++ S N MHVGH R ++GD +A + F G+ V Sbjct: 97 SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220 R ++ D G Q L + Q + N+ +L E +Y A K+ E Sbjct: 155 RANHVGDWGTQFGMLI--AYLEKMQNEHANEMELQDLEAFY----------REAKKHYDE 202 Query: 221 LLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNIQH-----DIFISEDDFHRGDP- 270 F E+ +VK D + M K + D N QH ++ ++E D G+ Sbjct: 203 DEIFAEKARNYVVKLQSGDEYCRTMWKRLVDITMQQN-QHNYDRLNVTLTEKDV-MGESL 260 Query: 271 -SP-IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 +P + I+ +L +QG E G L + K GD + + K Sbjct: 261 YNPMLPSIVKDLKKQGLAVENDGALVVYLDEFKNK--------------EGDPMGVIVQK 306 Query: 327 SDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI-NVL 384 DG + Y D+A K +YE D + + S ++++ A ++ K + + Sbjct: 307 KDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQHMQQ----AWLITRKAGYVPDSF 362 Query: 385 LCEL----VRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416 E + L +DG P K R G + L ++DE Sbjct: 363 SLEHKNFGMMLGKDGKPFKT--RTGGTVKLADLLDEAIERATVLINEKNTNLSNDEKEAV 420 Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +V++ L + + FD+ + + N Y+QYAY R RSIF + Sbjct: 421 IEAVGIGAVKYADLSKNRTTDYVFDWDNML-SFESNTAPYMQYAYTRIRSIFNKT----- 474 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 D + +P + D E L + L ++ ++ P+ L YLY+LA +F Sbjct: 475 --DINSTALLAVPLTIK-DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYELAGIFS 531 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + H + A + + + RL+L + GL ++G+++ +M Sbjct: 532 SFYEH------CPILNAEDESIKLSRLKLALLTEKTLKQGLTLLGIKTVEKM 577 >gi|190404719|gb|EDV07986.1| arginyl-tRNA synthetase [Saccharomyces cerevisiae RM11-1a] gi|323305436|gb|EGA59180.1| YDR341C-like protein [Saccharomyces cerevisiae FostersB] gi|323309660|gb|EGA62868.1| YDR341C-like protein [Saccharomyces cerevisiae FostersO] Length = 607 Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 135/545 (24%), Positives = 226/545 (41%), Gaps = 93/545 (17%) Query: 88 FINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 FI + +P +L K ++ I+ +YG + + KV IEF S N P H GH R ++ Sbjct: 109 FIQFFFNPQFLAKLVIPDILTRKEDYGSCKLVENKKVIIEFSSPNIAKPFHAGHLRSTII 168 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGV 204 G LA+L G+EV R Y+ D G Q LA+ F RY ++AL + P + V Sbjct: 169 GGFLANLYEKLGWEVIRMNYLGDWGKQFGLLAVG-FERYGNEEALVKD----PIHHLFDV 223 Query: 205 YLKHVGKELADKYSS---------------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249 Y++ + K++ ++ S + + +E+ L I K + ++ K I D Sbjct: 224 YVR-INKDIEEEGDSIPLEQSTNGKAREYFKRMEDGDEEALKIWKRFREFSIEKYI-DTY 281 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 LNI++D++ E + + ID +G +E DR + Sbjct: 282 ARLNIKYDVYSGESQVSK---ESMLKAIDLFKEKGLTHE----------------DRGAV 322 Query: 310 LFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD---HSG-- 362 L T + + ++ KSDG+ Y D+ +YE+ FD MIYV+ S H+ Sbjct: 323 LIDLTKFNKKLGKAIVQKSDGTTLYLTRDVGAAMDRYEKYHFDKMIYVIASQQDLHAAQF 382 Query: 363 ----------YVKRLEAV----AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 + K L+ V +S +K + V L ++ ++ M M K + Sbjct: 383 FEILKQMGFEWAKDLQLVNFGMVQGMSTRKGTV-VFLDNILEETKEKMHEVMKKNENKYA 441 Query: 409 TLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSI 464 + H V D VG +V + K +F + ++ + P Y+QYA++R RS+ Sbjct: 442 QIEHPEEVADLVGISAVMIQDMQGKRINNYEFKWERMLSFEGDTGP--YLQYAHSRLRSV 499 Query: 465 FRQAKDIFPD----LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520 R A I D DF L + + LI L +YP V+ NA EP Sbjct: 500 ERNASGITQDKWINADFSLLK----------EPAAKLLIRLLGQYPDVLRNAIKTHEPTT 549 Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + YL+ L + + +V +L RL L A ++ +G+ ++G+ Sbjct: 550 VVTYLFKLTHQVSSCYD-------VLWVAGQTEELATARLALYGAARQVLYNGMRLLGLT 602 Query: 581 SPNEM 585 M Sbjct: 603 PVERM 607 >gi|90076908|dbj|BAE88134.1| unnamed protein product [Macaca fascicularis] Length = 660 Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 137/605 (22%), Positives = 253/605 (41%), Gaps = 117/605 (19%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S+ L ++P IAE I + + ++ V IAG GFIN++L + Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDF 170 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + L+S++V+G++ +G+ KV ++F S N MHVGH R ++G++++ L F+ Sbjct: 171 VSEQLTSLLVNGVQLP--AVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFA 228 Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198 GY+V R ++ D G Q L L F++ + ++ + + + Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKK 288 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y V L GK N K ++ D S Q KI AL++ + Sbjct: 289 RAYQCVVLLQ-GK-----------NPDITKAWKLICDVSRQEFNKI----YDALDVS--L 330 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + F++ + DI+ +G+V + D D ++++F + G Sbjct: 331 IERGESFYQ---DRMNDIVQEFEDRGFV--------------QVD-DGRKIVF---VPGC 369 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 + ++KSDG YTY +DLA K + E D +IYV+ S S + + + A A + Sbjct: 370 SIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYVVDSGQSVHFQTIFAAAQMIGWY 429 Query: 378 KAQINVLLCELVRLYRDGMPI-------KMSKRAGDFITLRHVVDE-------------- 416 ++ R++ G + K RAG+ + L ++ E Sbjct: 430 DPKV-------TRVFHAGFGVVLGEDKKKFKTRAGETVRLMDLMGEGLKRSMDKLKEKER 482 Query: 417 ---------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461 + +++ L F F K+ + + N Y+ YA+ R Sbjct: 483 DKVLTAEELNAAQTSIAYGCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRI 541 Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYK 520 RSI R A ++D ++ + + D E +L + +P +++ + Sbjct: 542 RSIARLA-----NIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHT 596 Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 L Y+Y+LA+ F + + R K+ M R+ L AVA+++ G +I+G++ Sbjct: 597 LCDYIYELATTFTEFYDSCYCVEKDRQT-GKILKVNMWRMLLCEAVAAVMAKGFDILGIK 655 Query: 581 SPNEM 585 M Sbjct: 656 PVQRM 660 >gi|299143915|ref|ZP_07036995.1| arginine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518400|gb|EFI42139.1| arginine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 569 Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 148/619 (23%), Positives = 268/619 (43%), Gaps = 106/619 (17%) Query: 15 LKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI 74 +K +D KI ++ R IE P + G + L++ +P IA I I Sbjct: 9 VKILDGKIPELSEVEIRNAIETPPNYEMGDFAF-PVFSLAKVYKKNPAIIAGEIAGSINS 67 Query: 75 D--PDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131 + V+S +IN +++ L +L + +YG+ IGKG V +E+ S N Sbjct: 68 EYFEKVES----KSAYINFFINKKELAETVLREVSEKNEDYGKLGIGKGENVVVEYSSPN 123 Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 P H+GH R ++GD+L + AF GY ++ D G Q L +++ + + Sbjct: 124 IAKPFHIGHIRSTIIGDSLKRIYAFLGYNTIAINHLGDYGTQFGMLIVAIKKWGDKEVIK 183 Query: 192 NDSDLPEGYYPGVYLKHVGKELAD--------KYSSELLNFPEE--KWLPIVKDYSVQAM 241 ND +PE +Y+K + AD + +EL N EE K +++ S+ Sbjct: 184 NDP-IPE--LLKLYVKINAEAEADPALKDECRHWFNELENGNEEAYKLWEWIREISLDEF 240 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 K+ L++ +D F E + P + + ++ A + S Q Sbjct: 241 NKV----YNMLDVHYDSFNGESFYSDKMPGEVETLKNSGALK-----------LSDGAQI 285 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF-DNMIYVMGSDH 360 D+++ L ++KSDGS Y D+A ++E IYV+GS Sbjct: 286 VDLEKYNL----------PPSLIIKSDGSTIYITRDIAAAHYRHETYHPKRNIYVVGSQQ 335 Query: 361 SGYVKRLEAVAA-----------------------AVSEKKAQINVLLCELVRLYRDG-- 395 + ++L+AV A +S +K ++ V L +++ +D Sbjct: 336 ILHFQQLKAVLAEMGYDWSDEVVHVPFGMVSLEEGTLSTRKGRV-VYLEDVLNKAKDKVL 394 Query: 396 -MPIKMSKRAGDFITLR-HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVF 452 + + K+ G+ I + + +VG +V+F L+ + + FD+ K + + P Sbjct: 395 EILTEREKQRGEKIENKEELAAQVGIGAVKFQELFNQRIKDYVFDWDKTLTFEGETGP-- 452 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS------ELQLIVHLAEYP 506 YVQY +AR S+ + +FD +E++F+ S EL L+ + ++ Sbjct: 453 YVQYVHARICSLLEKG-------NFD--------KENKFNASLLTLDEELNLLRTIYKFT 497 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 V+ +A EPY + Y+ +LA +F+ +++ + V + +L RL L +AV Sbjct: 498 DVVIDAHEKYEPYFITRYVVELAKLFNKYYNSTQ-------VIVEDEELKNARLMLCYAV 550 Query: 567 ASIINSGLNIIGVESPNEM 585 ++I GLN+IGV +P +M Sbjct: 551 KTVIKEGLNLIGVAAPEKM 569 >gi|170289840|ref|YP_001736656.1| arginyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8] gi|229470717|sp|B1L3E4|SYR_KORCO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|170173920|gb|ACB06973.1| arginyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8] Length = 632 Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 146/608 (24%), Positives = 259/608 (42%), Gaps = 115/608 (18%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPS-YLRKILSSIVVSGI 110 +++ L LDP A+ ++ RI + S A G++NL + + + R IL + S Sbjct: 53 VAKDLNLDPERAAKTVLDRIDMSRIAYSSDAYAESGYLNLRIDKARFFRDILK--LASSE 110 Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170 E GR KG +E SANP P+HVG R AV+GD+ + ++ F G++V R Y +ND Sbjct: 111 ELGRGE-RKGVVGMVEHTSANPVHPLHVGSGRNAVIGDSFSRILNFLGWDVRRHYLVNDC 169 Query: 171 GAQINTLALS----------------------------VFWRYQQALYNNDSDLPEGYYP 202 Q+ LA WR + +N++S + E Sbjct: 170 NLQVAILAAGRSKVRDLIPKGKVDHWFGLIYAISNAFLEIWRIKNG-FNSESKIEEW--- 225 Query: 203 GVYLKHVGKELADKYSSELL---NFPEEKWLPIVKDY------SVQAMMKIIRDDLKA-L 252 ++ +G + ELL EE+ + ++++Y SVQ +I L+ + Sbjct: 226 SEVVERIG-----RMEPELLRIGELSEEEVMSLLREYQRKEGGSVQMFREITESVLRGFV 280 Query: 253 NIQHDIFISEDDFHRGDPSPIRD-----IIDNLARQGY-----------VYEGILPPPKS 296 + I+ D F R + I D I+ L GY ++E Sbjct: 281 ETLERMGITYDSFDR-ESELIWDGWVDRAIEKLESSGYLKREGKAAYVDLWEAAKGDENV 339 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRP--LLKSDGSYTYFAADLAYFKCKYER-GFDNMI 353 + + D L R +G+ + R L +SDG++ Y D+AY K++ G Sbjct: 340 RKVFELSEDDISKLEREGKLGEVIPRKFYLTRSDGTWLYTGTDVAYSLYKFDGLGVSFCY 399 Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 V+ S+ + K + A A + ++ L E+V L + MS R G +ITL V Sbjct: 400 NVIASEQNMEQKGVRACLALMGHDPGKLIHLSYEMVNL----VGAAMSGRRGLYITLDEV 455 Query: 414 VDE----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 +DE V ++++ ++ ++++ F + +V +EN Sbjct: 456 LDEAKRRVEAILKERGIYDEEICEKVAIGALKYGLISVSPNKVVQFRWERVL-NLEENSG 514 Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511 ++QYAY R +I ++A+ + D D P E + D +E+ ++ ++E+P + + Sbjct: 515 PFIQYAYTRALNIIKKAQGVPEDFD---------PNELKSD-AEITIVQMISEFPERVWS 564 Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571 A P +A Y +LAS F+ + ++P L + R RL LV+AV + Sbjct: 565 AFNLMRPDIIASYANELASQFNKFYE---DHPVLSAARPEER---AARLNLVNAVKGTLG 618 Query: 572 SGLNIIGV 579 +++IG+ Sbjct: 619 LAMDLIGI 626 >gi|327311388|ref|YP_004338285.1| arginyl-tRNA synthetase [Thermoproteus uzoniensis 768-20] gi|326947867|gb|AEA12973.1| arginyl-tRNA synthetase [Thermoproteus uzoniensis 768-20] Length = 629 Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 140/577 (24%), Positives = 242/577 (41%), Gaps = 112/577 (19%) Query: 88 FINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 +IN + P+ L ++ ++ G YG + + +E SANP P+HVGH R AV+ Sbjct: 74 YINADVDPARLAEELFKAVYAMGDRYGYSDRCVHGRYLVEHTSANPLHPLHVGHGRNAVL 133 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS--------DLPE 198 GD L L+ F G EV +Y++D G+Q+ AL Y+ A D DL Sbjct: 134 GDALVRLLRFCGSEVEVHFYVDDCGSQVMYAALG----YEAARREVDELIGRGVKPDLAV 189 Query: 199 GYYPGVY--------LKHVGKELADKYSSELLNFPEEKWLPIVKDY-SVQA-MMKIIRDD 248 GY V LK + + D+ E+L +E WL ++K + V+ ++ + + Sbjct: 190 GYVYSVATAIAEINRLKKLAEGQPDEKRREILAEIDE-WLGVIKRHLDVEPDLVNALTER 248 Query: 249 LKALNIQHDIFISEDDFHRGDPS---PIRDII--------DNLARQG-----YVYEGILP 292 L ++ + + RGD +R ++ + L R G + YE L Sbjct: 249 LGQRDLSAEAAELNRLYERGDEEVKRKVRAVVGLVLRGQQETLRRLGISVDSWDYESELA 308 Query: 293 PPKSKTTQKCDMDRKQ-----------LLFRSTMVGDDV------DRP-------LLKSD 328 + Q + R++ ++FR+ +D+ D P L +SD Sbjct: 309 VWNNAAAQLVEDLRRRWPAYIEYKEGAVVFRADKFAEDLKLREELDLPKFIPPVTLTRSD 368 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSD--HSGYVKRLEAVAAAVSEKKAQINVLLC 386 G+ Y D+AY + R D +I V+ S+ H R+ A E+ ++ Sbjct: 369 GTTLYVTRDVAYALWQSRRPVDKVIRVISSEQTHEQAHVRIILYALGYREEAKKLVHYTY 428 Query: 387 ELVRLYRDGMP-IKMSKRAGDFITLRHVVDE-----------------------VGSDSV 422 E+V MP +KMS R G ++ L ++DE VG+ ++ Sbjct: 429 EMV-----NMPGMKMSARRGQYVALDEILDEAAERSADVVKEKDREVASVVGEKVGAGAI 483 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 RF L + +DF + V + N ++QY Y R SI +A P Sbjct: 484 RFFYLSASPRKPIDFKW-DVVLNMRSNSGPFLQYTYVRASSILEKAGSA---------PG 533 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 + + E +L+ LA +P + +A P ++ YL L+ +F+ ++ + Sbjct: 534 SPPQIPPQIQPEEAELVERLAMWPWTVASAARDLRPDYISEYLNSLSLLFNSYYE---KY 590 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 P ++ + + RL LVHAV +++ +GLNI+G+ Sbjct: 591 PVIK----SEEPVRSFRLALVHAVRTVMRNGLNILGI 623 >gi|218245401|ref|YP_002370772.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 8801] gi|226701374|sp|B7JVP5|SYR_CYAP8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|218165879|gb|ACK64616.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 8801] Length = 585 Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 150/584 (25%), Positives = 247/584 (42%), Gaps = 91/584 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N A+ L++ LG P IA+ I+ + ++ + IAG GFIN+ + P+YL L Sbjct: 40 GDYQANIALSLAKKLGEQPRAIAQKIIDNLSLEDLGELPTIAGPGFINIKIKPTYLATQL 99 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + + G K+ ++F S N MHVGH R ++GD +A ++ G++V Sbjct: 100 K-VQQNSSSLGVTKADPIEKIIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEVRGHQVL 158 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222 R ++ D G Q L + Y AL D+ L G Y + A K E Sbjct: 159 RLNHVGDWGTQFGMLIAYLAEVYPDALTTADA-LDIGDLVTFYKQ------AKKRFDEDE 211 Query: 223 NFPEEKWLPIVK--------DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP--SP 272 F E +VK ++ Q + + R + + + DI I+E RG+ +P Sbjct: 212 KFQETARNQVVKLQAGDSQTRHAWQLLCEQSRREFQVIYDILDINITE----RGESFYNP 267 Query: 273 -IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + DII L QG + K +C L + GD + + KSDG Y Sbjct: 268 LLEDIIKELDHQGLL--------KKDAGAQCVF----LDGFTNKSGDPLPLIVQKSDGGY 315 Query: 332 TYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCEL 388 Y DLA K + + + +IYV + + + ++ VA A + K +I + L Sbjct: 316 NYATTDLAALKYRITQDQAERIIYVTDAGQANHFAQVFQVAKKAHIIPKNVEIIHVPFGL 375 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------------V 417 V+ DG K+ R+G I LR ++DE V Sbjct: 376 VK-GEDGK--KLKTRSGTTIKLRDLLDEAVIYARQDLEKRLAEEGRQESEDFIANVSQVV 432 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G +V++ L + + F + K+ + N Y+ YAYAR +SI R+ ++DF Sbjct: 433 GISAVKYADLSQNRTSDYIFSYDKMLA-LQGNTAPYMLYAYARIQSISREG-----NIDF 486 Query: 478 DLFPR--NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + + +I QE +E++L +L + VIE P +L YLY+L+ F+ Sbjct: 487 ESLQQEAKIILQEE----TEIELGKYLLQLSEVIEEVEKTLLPNRLCDYLYELSKKFNRF 542 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 + + P L+ + L RL L A + GL+++G+ Sbjct: 543 YENC---PVLK----SEEPLRTSRLLLCDLTARTLKLGLSLLGI 579 >gi|109079690|ref|XP_001091294.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic [Macaca mulatta] Length = 660 Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 137/605 (22%), Positives = 253/605 (41%), Gaps = 117/605 (19%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S+ L ++P IAE I + + ++ V IAG GFIN++L + Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDF 170 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + L+S++V+G++ +G+ KV ++F S N MHVGH R ++G++++ L F+ Sbjct: 171 VSEQLTSLLVNGVQLP--AVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESVSRLFEFA 228 Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198 GY+V R ++ D G Q L L F++ + ++ + + + Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKK 288 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y V L GK N K ++ D S Q KI AL++ + Sbjct: 289 RAYQCVVLLQ-GK-----------NPDITKAWKLICDVSRQEFNKI----YDALDVS--L 330 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + F++ + DI+ +G+V + D D ++++F + G Sbjct: 331 IERGESFYQ---DRMNDIVQEFEDRGFV--------------QVD-DGRKIVF---VPGC 369 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 + ++KSDG YTY +DLA K + E D +IYV+ S S + + + A A + Sbjct: 370 SIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYVVDSGQSVHFQTIFAAAQMIGWY 429 Query: 378 KAQINVLLCELVRLYRDGMPI-------KMSKRAGDFITLRHVVDE-------------- 416 ++ R++ G + K RAG+ + L ++ E Sbjct: 430 DPKV-------TRVFHAGFGVVLGEDKKKFKTRAGETVRLMDLMGEGLKRSMDKLKEKER 482 Query: 417 ---------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461 + +++ L F F K+ + + N Y+ YA+ R Sbjct: 483 DKVLTAEELNAAQTSIAYGCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRI 541 Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYK 520 RSI R A ++D ++ + + D E +L + +P +++ + Sbjct: 542 RSIARLA-----NIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHT 596 Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 L Y+Y+LA+ F + + R K+ M R+ L AVA+++ G +I+G++ Sbjct: 597 LCDYIYELATTFTEFYDSCYCVEKDRQT-GKILKVNMWRMLLCEAVAAVMAKGFDILGIK 655 Query: 581 SPNEM 585 M Sbjct: 656 PVQRM 660 >gi|22002514|gb|AAM82666.1| Syr [Synechococcus elongatus PCC 7942] Length = 584 Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 151/590 (25%), Positives = 233/590 (39%), Gaps = 104/590 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G +N AM L++ LG P IAE +V + + + IAG GFIN L PSYL L Sbjct: 40 GDYQSNVAMSLAKQLGQPPRAIAETLVQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQL 99 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + G + +V ++F S N MHVGH R ++GD++A ++ F G+EV Sbjct: 100 QQLQTDE-RLGIQPVSPPQRVIVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVL 158 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPG--------VYLKHVG 210 R ++ D G Q L + +Y QAL D SDL Y + + Sbjct: 159 RLNHVGDWGTQFGMLIAFLQEQYPQALSQPDALDISDLVAFYKQAKARFDEDPSFQETAR 218 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 + + D S E + W Q + R + + + + DI + E +P Sbjct: 219 QRVVDLQSGEATA--RQAW---------QLLCDQSRREFQKIYDRLDIQLEERGESFYNP 267 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSD 328 + I+++L R G + E D + + + PL+ KSD Sbjct: 268 Y-LPAIVEDLRRLGLLVE--------------DQGAQCVFLEGFQNKEGQPLPLIVQKSD 312 Query: 329 GSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINV 383 G Y Y DLA +Y G D +IYV S + + ++ VA A AQI Sbjct: 313 GGYNYATTDLAAL--RYRLGQDQAQRIIYVTDSGQANHFAQVFQVAQRAGWLPAAAQIEH 370 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416 + LV+ DG K+ RAGD + LR ++DE Sbjct: 371 VPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVDRARTDLTTRIAAEERSETPEFIEA 427 Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 VG +V++ L + + F F K+ + N Y+ YAY R + I R+ F Sbjct: 428 VAQAVGLGAVKYADLSQNRNSNYIFSFDKMLA-LQGNTAPYLLYAYVRIQGIARKGGIDF 486 Query: 473 PDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 LD P + P E LQL L E R + P +L YL++L+ Sbjct: 487 AQLD----PVAAVLTEPTERSLAKQVLQLGEVLNEVARDL-------LPNRLCSYLFELS 535 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 F+ + R + A + T RL + + GL+++G+ Sbjct: 536 QTFNQFYD------RCPILNAEEPQRT-SRLLVCDLTGRTLKLGLSLLGI 578 >gi|238756954|ref|ZP_04618142.1| Arginyl-tRNA synthetase [Yersinia aldovae ATCC 35236] gi|238704784|gb|EEP97313.1| Arginyl-tRNA synthetase [Yersinia aldovae ATCC 35236] Length = 576 Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 140/588 (23%), Positives = 244/588 (41%), Gaps = 93/588 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ ++ + V IAG GFIN++L + Sbjct: 37 GDYQANGVMAVAKKLGMQPRQLAEKVIEQLDLTGIASKVEIAGPGFINIFLDRQW----- 91 Query: 103 SSIVVSGIEYGRNLIGKGT------KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 V +EY G + +++ + N MHVGH R ++GD + F Sbjct: 92 ---VAEKVEYALTAPKLGVAPVEPLTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEF 148 Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGKELAD 215 G+ V R ++ D G Q L Y + + N N SD+ G+ + + A Sbjct: 149 LGHNVIRANHVGDWGTQFGMLI-----AYLEKMQNENASDM------GLSDLELFYQQAK 197 Query: 216 KYSSELLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNI----QHDIFISEDDFHR 267 K E F + +VK D +AM + + D A N + ++ +++DD Sbjct: 198 KTYDEDEEFAKRARAYVVKLQGGDEYCRAMWRKLVDITMAQNQIAYNRLNVTLTQDDVM- 256 Query: 268 GDP--SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ +P + I+ +L +G E + T D + + G+ + + Sbjct: 257 GESLYNPMLPGIVADLKAKGLAVE-----SEGATVVYLDEYKNK-------DGEPMGVII 304 Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSE 376 K DG Y Y D+A K +YE G D ++Y + S + V++ V +V Sbjct: 305 QKKDGGYLYTTTDIACAKYRYETLGADRVLYYIDSRQHQHLMQAWTIVRKAGYVPESVPL 364 Query: 377 KKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LRHVVDEV 417 + ++L + + + R G +K+S +RAG I L+ VV+ V Sbjct: 365 EHHMFGMMLGKDGKPFKTRSGGTVKLSDLLDEAIERAGKLIAEKNPDMPADELKQVVEAV 424 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G +V++ L + + FD+ + N Y+QYAY R S+F++A L Sbjct: 425 GIGAVKYADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVISVFKRAGIDESSLTL 483 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 L VI +E E L L ++ VI P+ + YLYDLA +F + Sbjct: 484 PL----VITEERE-----ASLATRLLQFEEVITAVAREGTPHVMCSYLYDLAGLFSSFYE 534 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H + + A++ + RL+L A + GL+ +G+++ M Sbjct: 535 H------CQILNADSEESRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 576 >gi|254415644|ref|ZP_05029403.1| arginyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420] gi|196177594|gb|EDX72599.1| arginyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420] Length = 585 Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 140/598 (23%), Positives = 239/598 (39%), Gaps = 119/598 (19%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G +NAA+ L++PLG P IA++++ + + + +AG GFIN L P+YL L Sbjct: 40 GDYQSNAALSLAKPLGQPPRAIAQMLINHLDVADICYTPTVAGPGFINFTLKPAYLEAKL 99 Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 + + G+E + + +V ++F S N MHVGH R ++GD +A ++ F + Sbjct: 100 NRNLTHPHLGVEPAK----QPQRVVVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFRDH 155 Query: 160 EVTREYYINDAGAQINTL----------ALSV-----------FWRYQQALYNNDSDLPE 198 +V R ++ D G Q L AL+ F+R + ++ D E Sbjct: 156 DVLRLNHVGDWGTQFGMLITYLREVCPEALTTAEAVDLGDLVSFYRQAKKRFDTDEVFQE 215 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 V G E + W Q + + R + + + D+ Sbjct: 216 AARQEVVKLQAGAEDTKR-----------AW---------QLLCEQSRREFQVIYDLLDV 255 Query: 259 FISEDDFHRGDP--SPIR-DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315 I+E RG+ +P+ D++ +L + G + E D K + Sbjct: 256 HITE----RGESFYNPLLPDVVKDLEQSGLLVE--------------DQGAKCVFLEGFT 297 Query: 316 VGDDVDRPLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA 372 PL+ KSDG Y Y DLA + + ++ G +IYV + + + ++ VA Sbjct: 298 NKKGEPLPLIVQKSDGGYNYATTDLAALRYRIDQNGAKRIIYVTDAGQANHFAQVFQVAQ 357 Query: 373 ------------------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT----- 409 + E ++ E VRL RD + +++ D T Sbjct: 358 RAGWLPEIVEIVHVPFGLVLGEDGKKLKTRSGETVRL-RDLLDQAIARARADLETRIQAE 416 Query: 410 --------LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461 + HV VG +V++ L + + F F K+ K N Y+ YAYAR Sbjct: 417 GRQETEEFIEHVAQVVGMAAVKYADLSQNRTSNYVFSFDKMLS-LKGNTAPYLLYAYARI 475 Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 +SI R+ +DF+ + Q S + E L HL + VI+ P +L Sbjct: 476 QSIGRKG-----GIDFEQLRTST--QVSLKEDQEATLAKHLLQVNEVIKEVEQELLPNRL 528 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 YLY+L+ F + + P L+ + + RL L A + GL+++G+ Sbjct: 529 CQYLYELSEKFSQFYD---QCPVLK----AEESVRLSRLILCDLTAQTLKLGLSLLGI 579 >gi|145632971|ref|ZP_01788704.1| arginyl-tRNA synthetase [Haemophilus influenzae 3655] gi|144986627|gb|EDJ93193.1| arginyl-tRNA synthetase [Haemophilus influenzae 3655] gi|309973254|gb|ADO96455.1| Arginyl-tRNA synthetase [Haemophilus influenzae R2846] Length = 577 Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 141/594 (23%), Positives = 238/594 (40%), Gaps = 104/594 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LGL+P A+ ++ +++ + + IAG GFIN++L+P++L + Sbjct: 37 GDYQANGIMAAAKKLGLNPREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 S+ +S G K T V I++ S N MHVGH R ++GD +A + F G+ V Sbjct: 97 SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220 R ++ D G Q L + Q + ++ +L E +Y A K+ E Sbjct: 155 RANHVGDWGTQFGMLI--AYLEKMQNEHASEMELQDLEAFY----------REAKKHYDE 202 Query: 221 LLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNIQH-----DIFISEDDFHRGDP- 270 F E+ +VK D + M K + D N QH ++ ++E D G+ Sbjct: 203 DEVFAEKARNYVVKLQSGDEYCRTMWKRLVDITMQQN-QHNYNRLNVTLTEKDV-MGESL 260 Query: 271 -SP-IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 +P + I+++L +QG E G L + K GD + + K Sbjct: 261 YNPMLPSIVEDLKKQGLAVENDGALVVYLDEFKNK--------------EGDPMGVIVQK 306 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY--------VKRLEAVAAAVSEKK 378 DG + Y D+A K +YE N V ++ V + S + Sbjct: 307 KDGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEH 366 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 ++L +DG P K R G I L ++DE Sbjct: 367 KNFGMMLG------KDGKPFKT--RTGGTIKLADLLDEAIERATVLINEKNTNLSNDEKE 418 Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VG +V++ L + + FD+ + + N Y+QYAY R RSIF + Sbjct: 419 AVIEAVGIGAVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNKT--- 474 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 D + P + D E L + L ++ ++ P+ L YLY+LA + Sbjct: 475 ----DINSTALLAAPLTIK-DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYELAGI 529 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + H + A N + + RL+L + GL ++G+++ +M Sbjct: 530 FSSFYEH------CPILNAENESIKLSRLKLALLTEKTLKQGLTLLGIKTVEKM 577 >gi|253688194|ref|YP_003017384.1| arginyl-tRNA synthetase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259511652|sp|C6DFD9|SYR_PECCP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|251754772|gb|ACT12848.1| arginyl-tRNA synthetase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 576 Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 140/612 (22%), Positives = 238/612 (38%), Gaps = 123/612 (20%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 I + G N M +++ LG+ P +AE +V + ++ + IAG GFIN++L Sbjct: 28 IRQSAKAQFGDYQANGVMAVAKKLGMPPRQLAEKVVQLLALEGIAEKTEIAGPGFINIFL 87 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKG------TKVNIEFVSANPTGPMHVGHCRCAVVG 147 + V S +E N G + I++ + N MHVGH R ++G Sbjct: 88 DKQW--------VASQVENALNAPKLGLTPVEPQTIVIDYSAPNVAKEMHVGHLRSTIIG 139 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQAL 189 D A + F G+ V R ++ D G Q L L F+R + Sbjct: 140 DAAARTLEFLGHNVIRANHVGDWGTQFGMLIAYLEKMQNENASEMDLSDLEAFYREAKKH 199 Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249 Y++D+D E G +K G D+Y ++ W +V Q + R L Sbjct: 200 YDDDADFAE-RARGYVVKLQG---GDEYCRQM-------WRKLVDITMTQNQINYER--L 246 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 + D+ + E ++ P I+ +L +G E S+ +D + Sbjct: 247 NVTLTKQDV-MGESLYNSMLPG----IVADLKAKGLAVE-------SEGATVVFLDEYK- 293 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY----- 363 G+ + + K DG Y Y D+A K +YE D ++Y + S + Sbjct: 294 ----NKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLNADRVLYYIDSRQHQHLMQAW 349 Query: 364 --VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 V++ V +VS + ++L +DG P K RAG I L ++DE + Sbjct: 350 TIVRKAGYVPDSVSLEHHMFGMMLG------KDGKPFKT--RAGGTIKLSELLDEAYDRA 401 Query: 422 VRFMMLWRKN-----------SELLDFDFCKVKEQSKE-----------------NPVFY 453 ++ ++ KN ++++ K + SK N Y Sbjct: 402 LK--LIAEKNPQMESDELSALAKVVSIGAIKYADLSKSRTTDYVFDWDNMLAFEGNTAPY 459 Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513 +QYAY R SIF++A + D + + D E L L ++ I + Sbjct: 460 MQYAYTRVASIFKRA-----GIQEDSLTQPITLS----DEREFALATRLLQFEETITSVA 510 Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573 P+ + YLYDLA +F G + H + A + + RL+L A + G Sbjct: 511 REGTPHVMCSYLYDLAGLFSGFYEH------CPILNAESDDVRQSRLRLALLTAKTLKQG 564 Query: 574 LNIIGVESPNEM 585 L+ +G+E+ +M Sbjct: 565 LDTLGIETVEKM 576 >gi|219119306|ref|XP_002180416.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407889|gb|EEC47824.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 573 Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 153/593 (25%), Positives = 253/593 (42%), Gaps = 80/593 (13%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARI--KIDPDVDSVFIAGKGFINLYLSPSYLRK 100 G NAAM L++ L L P A IV + KI ++ IAG GF+NL SYL + Sbjct: 11 GDYQVNAAMGLAKALNLSPRECAAQIVKALQPKIQSFMEEPEIAGPGFVNLRFRTSYLTQ 70 Query: 101 ILSSIVVSGIEYGRNLI---GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 +SS+ +G GR + + K+ ++F S N MHVGH R ++GDTL +++ F+ Sbjct: 71 AVSSM--AGDAQGRLAVPRTAQTQKIVVDFSSPNIAKEMHVGHLRSTIIGDTLCNVLEFA 128 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADK 216 G+EVTR ++ D G Q L + Y AL ++ + D+ G +Y + A K Sbjct: 129 GHEVTRLNHVGDWGTQFGMLVEHLRDEYPAALRSDTADDVDLGDLVQLY------KAAKK 182 Query: 217 YSSELLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP- 270 E F +VK + + A + K +D E RG+ Sbjct: 183 RFDEDDEFKTRAREGVVKLQAGNEEELAAWESLCAASRKEYQKIYDRLQIEGLVERGESF 242 Query: 271 -SP-IRDIIDNLARQGYVYE--GIL-------------PPP----KS------KTTQKCD 303 +P ++D++D L +G E G L P P KS TT Sbjct: 243 YNPFLKDVVDELVEKGLAVESDGALVVYLEGYTNRDGSPLPMIVRKSDGGFNYATTDLAA 302 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSD-GSYTYF-----AADLAYFKCKYERGFDNMIY--V 355 M + L+ R+ G+ DR L +D G +F A +A F C+ +++ + V Sbjct: 303 MRHRTLMPRAES-GERADRVLYVTDAGQAQHFEMVFEAGKVAGF-CREGASLEHVPFGLV 360 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI-TLRHVV 414 G D + R S + ++ LL E VR+ + + +F+ + +V Sbjct: 361 QGEDGKKFATR--------SGETVKLKDLLDEAVRISGADLKKRNENVDQEFLDRVDNVA 412 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA--KDIF 472 VG +V++ L F + ++ + N Y+ YAYAR I R+A ++ Sbjct: 413 RIVGIGAVKYADLSMNRESNYRFSYDRMLSLNG-NTAPYMLYAYARVCGIIRKASGQEGT 471 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 +D+ +I E SEL+LI +L + P V+ P ++ YL++ + F Sbjct: 472 GAIDWPKASEIMITHE-----SELELIRNLVKLPDVLNEVERELYPNRMCDYLFETSQKF 526 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + N +A + ++ RL L A A I L ++G+E+ +M Sbjct: 527 NQFYESCSVN------KAESEEIKASRLSLCTATAGTIRLLLTLLGIETLEKM 573 >gi|90416671|ref|ZP_01224601.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2207] gi|90331424|gb|EAS46660.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2207] Length = 579 Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 134/588 (22%), Positives = 253/588 (43%), Gaps = 90/588 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AM ++ L ++P +AE I+ +D D + IAG GFIN++L ++L L Sbjct: 37 GDYQANGAMAAAKRLKMNPRDLAEKIIQLADLDGIADRLEIAGPGFINIHLCDAFLTASL 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + + + +L G +V +++ S N MHVGH R ++GD +A ++ + G+ V Sbjct: 97 GTNTLY-TQSESDLDGTQKRVVVDYSSPNLAKEMHVGHLRSTIIGDAVARVLEYQGHTVL 155 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222 R+ ++ D G Q L + QQ ++L G Y + + K+ L Sbjct: 156 RQNHMGDWGTQFGMLIAEL---EQQLSEGEQAELALGDLELFY------QQSKKHFDADL 206 Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI-------------FISEDDFHRGD 269 F + +VK S A + + +++ H++ I + + D Sbjct: 207 EFADTARAYVVKLQSGDAHCRGLWQKFIQVSVAHNLEIYAQLNVGLTAEHIMPESAYNDD 266 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLL--K 326 +++++D+L + E D +++F + + + P++ K Sbjct: 267 ---LQNVLDDLLAKDLALES---------------DGAKVVFLDELADKNGNPSPMIVQK 308 Query: 327 SDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEA-------VAAAVSEKK 378 S G + Y +DLA + + + D ++Y + + S ++K++ A V+ AVS + Sbjct: 309 SGGGFLYATSDLAAMRYRVGQLQADRILYFIDARQSLHMKQVFAAARKADYVSDAVSLEH 368 Query: 379 AQINVLLCELVRLY--RDGMPIKMS-------KRAGDFI----------TLRHVVDEVGS 419 ++ + R + R G +K++ +RA + + ++ VG Sbjct: 369 HPFGTMMGKDGRPFKTRSGGTVKLADLLVEAVERAEQLLRSKNTDLGEDEISNIARSVGI 428 Query: 420 DSVRFMML--WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 ++++ L R N + D+D E N Y+QYAY R RSIFR+A + Sbjct: 429 GAIKYADLSKTRTNDYIFDWDAMLSFEG---NTAPYLQYAYTRIRSIFRKAG-----ISA 480 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 + F + E + E LI+ L ++ V++ P+ L Y+Y+LAS + + Sbjct: 481 ESFSAEISITEHQ----EKALIMKLLQFDNVVDQVAAEGYPHILCNYVYELASAYMTFYE 536 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H P L+ +L RLQL + I GL+++G+E +M Sbjct: 537 H---CPVLK--DEVPEELQKSRLQLCKLTSETIAKGLDLLGIEVMEKM 579 >gi|320322071|gb|EFW78167.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. B076] Length = 578 Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 139/602 (23%), Positives = 247/602 (41%), Gaps = 101/602 (16%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE ++A + D V V IAG GF+N Sbjct: 30 IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPYDEQVSKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + + ++ G +V ++ + N MHVGH R ++GD +A Sbjct: 90 FQN-TAALAARLDAALADAHLSVRKAGAVQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ F G V R+ ++ D G Q L + + + A + SDL E +Y Sbjct: 149 NVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263 A + E F E +VK + A + K +++ H ++ ++ Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLALWTRFKDISLSHCQETYERLNVKLTPA 255 Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 D G+ + + +++++L G + E S Q ++ FR+ DD Sbjct: 256 DVM-GESAYNDDLANVVNDLKATGLLVE-------SNGAQCVFLEE----FRT---ADDT 300 Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374 P++ K+ G Y Y DLA ++ K + D + Y + + + +++ VA A Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKA-DRVQYFVDQRQALHFQQVFEVARRAGF 359 Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410 Q+ + + RDG +K+ +RA + L Sbjct: 360 VHDGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEAEL 419 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQMLS-FEGNTAPYLLYAYTRVAGVFRKL-- 476 Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 FD ++ PQE E L LA++ + N P+ L YLYD Sbjct: 477 ---GTPFDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYD 526 Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 LA +F + + G ENP + RL+L + GL+++G+E+ Sbjct: 527 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 576 Query: 584 EM 585 M Sbjct: 577 RM 578 >gi|328464593|gb|EGF35958.1| arginyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463] Length = 551 Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 143/599 (23%), Positives = 253/599 (42%), Gaps = 108/599 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IERP++ G + A IL++ L +P IA+ I + D + S+ G ++N Sbjct: 15 LIERPKNAKMGDYAF-PAFILAKTLRKNPAMIAQDIAENLSSD-NFASIKAVGP-YVNFA 71 Query: 93 LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + L L I+ YG G+G + I+ S N PM +GH R V+G+++A Sbjct: 72 IDHEKLVSSTLKDILSEKEHYGDQKFGEGN-IPIDMSSPNIAKPMSMGHLRSTVIGNSIA 130 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 M GY + Y+ D G Q L + Y+ + N+ D+ + ++ +V Sbjct: 131 KTMEKVGYTPIKINYLGDYGTQFGKLIAA----YKH--WGNEEDVKKDPIMNLFHYYV-- 182 Query: 212 ELADKYSSELLNFPE-----EKWLPIVKDYSVQA--MMKIIR----DDL----KALNIQH 256 ++ E N PE +W ++D +A + K R +D K L + Sbjct: 183 ----RFHKEAENNPELDDEGREWFKKLEDGDPEAVKLWKWFREVSLEDFKRIYKELGVTF 238 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D + E F+ ++ +ID L +G ++E S+ Q DM Sbjct: 239 DSYNGEAFFN----DKMQPVIDELKEKGLLHE-------SRGAQVVDMGP---------- 277 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV----- 370 D+ ++KSDG+ Y DLA + + E F M+YV+G++ + + L+ V Sbjct: 278 -DENPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQAQHFVELKTVLKKMG 336 Query: 371 ------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412 +S +K + V L ++++ ++ ++ D Sbjct: 337 YDWSDEIHHVPFGLITQGGKKLSTRKGNV-VFLDQVLKDAISLAKKQIEEKNPDLADKDQ 395 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDF---CKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 V +VG +V F L KN L +FDF V+ + P YVQY AR +S+ R+A Sbjct: 396 VAHDVGVGAVIFHDL--KNDRLDNFDFDLDEVVRFEGDTGP--YVQYTNARAQSVLRKAA 451 Query: 470 DIFPDLDFDLFPRNVIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 + P E +F D + LA++PR+I + EP +A + Sbjct: 452 AM-----------GEKPSEGDFALDDDWAFAVAKDLADFPRIIARSADKFEPSVIAKFAL 500 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 DLA F+ ++++ ++ + +++ RL LV A + ++ L ++GV +P EM Sbjct: 501 DLAKKFNKYYAN------VKILTKDDK--IGARLALVQATSIVLTEALRLLGVNAPKEM 551 >gi|332307387|ref|YP_004435238.1| arginyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174716|gb|AEE23970.1| arginyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 578 Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 144/596 (24%), Positives = 243/596 (40%), Gaps = 89/596 (14%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 + R G N AM L++ L P IA+ IVA +++D + + +AG GFIN+YL Sbjct: 28 LSRATKVGFGDYQFNGAMALAKVLKQKPRDIADKIVAAVELDGIAEKLEVAGPGFINIYL 87 Query: 94 SPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 S +L LS IE R+ V +++ S N MHVGH R ++GD + Sbjct: 88 SKDWLATQLSEAAADPRLNIETQRS-----KTVVVDYSSPNLAKEMHVGHLRTTIIGDAV 142 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + F G++V R+ ++ D G Q L L + + L L Sbjct: 143 VKALEFMGHKVIRQNHMGDWGTQFGML-----------LAHLNDKLESNQVAETAL---- 187 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD-----IFISEDDF 265 +L D Y + F EE D + + ++K+ D L + + I SE+ + Sbjct: 188 SDLEDFYREAKVRFDEEDGFA---DRAREYVVKLQGGDAHCLALWQNFIDVSITHSEEVY 244 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP-- 323 + + S R I + + ++ ++K + + Q++F + D +P Sbjct: 245 DKLNVSLTRADIMGESAYNHDLANVVSELQAKGL-AVESEGAQVVFLPEL-ADKEGKPAA 302 Query: 324 --LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 + KS G Y Y DLA + + ++ D + + + + + K+ E VA + + Sbjct: 303 YIVQKSGGGYLYATTDLAAVRYRNKQLHADRTLILTDARQALHFKQTEIVARKAGFIEPE 362 Query: 381 INVLLCEL-VRLYRDGMPIK-----------------------MSKRAGDFIT--LRHVV 414 C + L DG P K +SKR D T L+ + Sbjct: 363 QTYEHCPFGMMLGSDGRPFKTRTGGTVKLVELLDEAVERAQALLSKRETDLSTDELKVLA 422 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARCRSIFRQA----K 469 +++G +V++ L + + D+ F S E N Y+QYAY R SIFR+A K Sbjct: 423 NKIGIGAVKYADLSKNRTT--DYMFSWDSMLSFEGNTAPYLQYAYTRVMSIFRKAGVDHK 480 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 + + D PQE +LQ Y I P+ L YLY+LA Sbjct: 481 TLNAAITLD------APQEKMLAVKQLQ-------YVEAINQVIAEGTPHVLCTYLYELA 527 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 S+F + P L+ + ++ R+ L A + SGL+++G+++ M Sbjct: 528 SLFMSFY---EACPMLK--EGIAPEVRDSRMTLAALTAKTLQSGLSLLGIDTMERM 578 >gi|238788535|ref|ZP_04632328.1| Arginyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641] gi|238723448|gb|EEQ15095.1| Arginyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641] Length = 576 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 141/597 (23%), Positives = 242/597 (40%), Gaps = 111/597 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + +D V IAG GFIN++L + Sbjct: 37 GDYQANGVMAVAKKLGMQPRQLAEKVIELLDLDGIASKVEIAGPGFINIFLDRQW----- 91 Query: 103 SSIVVSGIEYGRNLIGKGT------KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 V S +E+ G + +++ + N MHVGH R ++GD + F Sbjct: 92 ---VASKVEHALTAPKLGVAPVEPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEF 148 Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGKELAD 215 G+ V R ++ D G Q L Y + + N N SD+ G+ + + A Sbjct: 149 LGHNVIRANHVGDWGTQFGMLI-----AYLEKMQNENASDM------GLSDLELFYQQAK 197 Query: 216 KYSSELLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHD---IFISEDDFHR 267 K E F + +VK +Y Q K++ + I +D + +++DD Sbjct: 198 KTYDEDEEFAQRARAYVVKLQGGDEYCRQMWRKLVDITMAQNQIAYDRLNVTLTKDDVM- 256 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS---TMV-------- 316 G+ +Y +LP + D+ K L S T+V Sbjct: 257 GES---------------LYNAMLPGIVA------DLKAKGLAVESDGATVVYLDEYKNK 295 Query: 317 -GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRL 367 G+ + + K DG Y Y D+A K +YE G D ++Y + + + V++ Sbjct: 296 DGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYYIDTRQHQHLMQAWTIVRKA 355 Query: 368 EAVAAAVSEKKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFIT--------- 409 V +V + ++L + + + R G +K+S +RAG I Sbjct: 356 GYVPESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLDEAIERAGKLIAEKNPDMPAD 415 Query: 410 -LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 L+ VV+ VG +V++ L + + FD+ + N Y+QYAY R SIF++A Sbjct: 416 ELKQVVEAVGIGAVKYADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSIFKRA 474 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 L L VI ++ E L L ++ VI P+ + YLYDL Sbjct: 475 GIDENSLTLPL----VITEDRE-----AALATRLLQFEEVITTVAREGTPHVMCSYLYDL 525 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A +F + H + + A + + RL+L A + GL+ +G+++ M Sbjct: 526 AGLFSSFYEH------CQILNAESEESRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 576 >gi|259503640|ref|ZP_05746542.1| arginine-tRNA ligase [Lactobacillus antri DSM 16041] gi|259168393|gb|EEW52888.1| arginine-tRNA ligase [Lactobacillus antri DSM 16041] Length = 562 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 146/606 (24%), Positives = 261/606 (43%), Gaps = 110/606 (18%) Query: 26 KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85 ++I+D+I ERP+D +G + L++ L P IA +V +I + V +AG Sbjct: 21 EEIVDKI--ERPKDANNGDYAF-PTFFLAKTLHKAPQMIAADLVEKID-QAGFEKVVVAG 76 Query: 86 KGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 +IN +L + + +I+ +I+ YG+ +G G V I++ S N PM +GH R Sbjct: 77 P-YINFFLDKAQVGAEIIKAILADPAGYGKKDLGHGANVTIDYSSPNIAKPMGMGHLRST 135 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQALYNNDSDLPEGYYPG 203 ++G+ +A ++ Y R Y+ D G Q L A W ++ + + + YY Sbjct: 136 MIGEAIARILEKENYTPVRIDYLGDWGTQFGKLMAAYQMWGSEEEVKKDPINTLLKYYVR 195 Query: 204 VYLK--------HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255 + + G+E + ++L + +E W + + Q ++ R L++ Sbjct: 196 INTEAEEHPEYTDAGRE----WFAKLEHGDKEAWR--LWHWFRQISIERFRKVYDMLDVH 249 Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315 D F E + PI+ + D + S+ Q D+D +L Sbjct: 250 FDSFNGEAFSAQKMDDPIQLLKDKHLLKA-----------SRGAQIVDLDAYKLT----- 293 Query: 316 VGDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371 PL +KS+G+ TY DLA Y K + G +YV+G++ Y K+L+AV Sbjct: 294 ------PPLIIKSNGTTTYITRDLATALYRKRMF--GHAKSLYVVGAEQENYYKQLKAVL 345 Query: 372 AAVS----EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD------------ 415 + ++ I+ L L +G KMS R G+ + L V++ Sbjct: 346 KEMGFTWWDQLEHISFGLMNL-----NGQ--KMSTRKGNVVNLEDVLNDSIKLARQQIAE 398 Query: 416 -------------EVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARC 461 +VG +V F L ++F VK + + P YVQYA AR Sbjct: 399 KNPDLPNADEVAKQVGVGAVIFHDLKNDRRNAVNFKLEDVVKFEGETGP--YVQYARARA 456 Query: 462 RSIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 SI R+ +D F +D ++ + ++ L++Y V+E A + +P Sbjct: 457 ESILRKGGVRD-FSAVDL-----------TKVGDAAWDILSFLSQYSDVVERAAVNYDPS 504 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 +A Y +L+ F+ +++H R +Q + + RL LV AV+ I+ L ++ + Sbjct: 505 VIAKYALELSKKFNQYYAHN------RILQDDEGQTA--RLALVQAVSHILKDALAMLDI 556 Query: 580 ESPNEM 585 ++P+EM Sbjct: 557 KAPDEM 562 >gi|229845606|ref|ZP_04465732.1| arginyl-tRNA synthetase [Haemophilus influenzae 6P18H1] gi|229811473|gb|EEP47176.1| arginyl-tRNA synthetase [Haemophilus influenzae 6P18H1] Length = 577 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 137/593 (23%), Positives = 237/593 (39%), Gaps = 102/593 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LGL+P A+ ++ +++ + + IAG GFIN++L+P++L + Sbjct: 37 GDYQANGIMAAAKKLGLNPREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 S+ +S G K T V I++ S N MHVGH R ++GD +A + F G+ V Sbjct: 97 SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220 R ++ D G Q L + Q + ++ +L E +Y A K+ E Sbjct: 155 RANHVGDWGTQFGMLI--AYLEKMQNEHASEMELQDLEAFY----------REAKKHYDE 202 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISEDDFHRGDP-- 270 F E+ +VK S +++ L + +Q ++ ++E D G+ Sbjct: 203 DEVFAEKARNYVVKLQSGDEYCRMMWKRLVDITMQQNQHNYNRLNVTLTEKDV-MGESLY 261 Query: 271 SP-IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 +P + I+++L +QG E G L + K GD + + K Sbjct: 262 NPMLPSIVEDLKKQGLAVENDGALVVYLDEFKNK--------------EGDPMGVIVQKK 307 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY--------VKRLEAVAAAVSEKKA 379 DG + Y D+A K +YE N V ++ V + S + Sbjct: 308 DGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEHK 367 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 ++L +DG P K R G I L ++DE Sbjct: 368 NFGMMLG------KDGKPFKT--RTGGTIKLADLLDEAIERATVLINEKNTNLSNDEKEA 419 Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 VG +V++ L + + FD+ + + N Y+QYAY R RSIF + Sbjct: 420 VIEAVGIGAVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNKT---- 474 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 D + P + D E L + L ++ ++ P+ L YLY+LA +F Sbjct: 475 ---DINSTALLAAPLTIK-DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYELAGIF 530 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + H + A N + + RL+L + GL ++G+++ +M Sbjct: 531 SSFYEH------CPILNAENESIKLSRLKLALLTEKTLKQGLTLLGIKTVEKM 577 >gi|268589751|ref|ZP_06123972.1| arginine--tRNA ligase [Providencia rettgeri DSM 1131] gi|291314906|gb|EFE55359.1| arginine--tRNA ligase [Providencia rettgeri DSM 1131] Length = 576 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 137/602 (22%), Positives = 240/602 (39%), Gaps = 121/602 (20%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ +G+ P +AE +V + ++ V IAG GFIN++L P+++ K + Sbjct: 37 GDYQANGVMGAAKKMGIAPRQLAEQLVNHLDLEGIASKVEIAGPGFINIFLEPAWVEKHV 96 Query: 103 SSIVVSGIEYGRNLIG----KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158 + S +G K + I++ + N MHVGH R ++GD A F G Sbjct: 97 EEALAS------QRLGIAPVKPETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEFIG 150 Query: 159 YEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDL---P 197 ++V R ++ D G Q L L F+R + Y+ D + Sbjct: 151 HKVIRANHVGDWGTQFGMLIAYLEKVQNEDATDMALADLEEFYREAKKHYDEDEEFAVRA 210 Query: 198 EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257 GY V + D+Y ++ W +V D ++Q + R + + Sbjct: 211 RGYV-------VKLQSGDEYCRQM-------WRKLV-DITMQQNQETYR--------RLN 247 Query: 258 IFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 + ++EDD G+ S + I+ +L +G E S+ +D F++ Sbjct: 248 VTLTEDDV-MGESLYNSMLPGIVADLKAKGLAVE-------SEGATVVFLDE----FKNK 295 Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV--- 370 G+ + + K DG + Y D+A K +YE D +Y + S ++ + + Sbjct: 296 E-GEPMGVIVQKKDGGFLYTTTDIACAKYRYETLHADRSLYYIDSRQHQHLMQAWTIVRK 354 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------- 416 A + E A + + + L +DG P K R G + L ++DE Sbjct: 355 AGYIPESMALEHHMFGMM--LGKDGKPFK--TRTGGTVRLSDLLDEAVERAQALIREKNP 410 Query: 417 -------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463 VG +V++ L + + FD+ + + N Y+QYAY R S Sbjct: 411 DMPEDELLNVANVVGIGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVAS 469 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 IF++A DL + S D E+ L L ++ I P+ + Sbjct: 470 IFKKANLTHADLTLPI---------SLQDPREIALATRLLQFEETILTVARDGTPHVMCA 520 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 YLY+LA +F G + H + A++ RL+L + +GL+ +G+E+ Sbjct: 521 YLYELAGLFSGFYEH------CPILSADDEAQRQSRLKLAALTQKTLKTGLDTLGIETVE 574 Query: 584 EM 585 M Sbjct: 575 RM 576 >gi|9715730|emb|CAC01600.1| putative arginyl-tRNA synthetase [Anabaena circinalis 90] Length = 585 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 152/601 (25%), Positives = 246/601 (40%), Gaps = 113/601 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N A+ LS+ LG P IA IV+++ + + IAG GFINL L SYL L Sbjct: 40 GDYQANVALSLSKKLGKQPRIIAGEIVSKLDVSDICEPPEIAGPGFINLKLQTSYLEAQL 99 Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 ++I + GI N K ++F S N MHVGH R ++GD++A ++ F G+ Sbjct: 100 NAIQIDARLGIPTATN----PQKQIVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFCGH 155 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 +V R ++ D G Q L + Y AL ++ +G +L + Y Sbjct: 156 DVLRLNHVGDWGTQFGMLITYLREVYPDALTTANA------------LDIG-DLVNFYRK 202 Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKI---IRDDLKA-----------LNIQHDIFISEDDF 265 F E+ P+ ++ S Q ++++ D L A I +D+ ++ + Sbjct: 203 AKQRFDED---PVFQETSRQEVVRLQAGAEDTLHAWKLLCEQSRQEFQIIYDL-LNVELI 258 Query: 266 HRGDP--SPIR-DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322 RG+ +P+ +++NLA G + +S KC L + G+ + Sbjct: 259 ERGESFYNPLLPKVVENLATTGLL--------ESSQGAKCVF----LDGFTNREGNPLPL 306 Query: 323 PLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381 + K+DG Y Y DLA + E ++YV S + + VA +KA Sbjct: 307 IVQKTDGGYNYATTDLAALGYRIQEDKAKRIVYVTDEGQSNHFAQFFQVA-----RKANW 361 Query: 382 NVLLCELVR------LYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416 ELV L DG K R+GD + LR ++DE Sbjct: 362 IPEDVELVHVPFGLVLGEDGK--KFKTRSGDTVRLRDLLDEAINRARADIENRLQEDERT 419 Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 VG +V++ L + + F + K+ K N Y+ YAY R + I Sbjct: 420 ETEEFMQNVAEVVGISAVKYADLSQNRTSSYVFSYDKMLS-LKGNTAPYLLYAYVRIQGI 478 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 RQ F +L + R ++ +E +EL L HL + VI+ P +L Y Sbjct: 479 SRQGNIDFTNLGIN---RQILLKED----AELTLAKHLLQLDEVIKEVEQDLLPNRLCDY 531 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 LY L+ F+ + + P L+ + RL L A + GL+++G++ Sbjct: 532 LYQLSDKFNKFYENC---PVLK----SEEPARTSRLMLCDLTAKTLKLGLSLLGIKVLER 584 Query: 585 M 585 M Sbjct: 585 M 585 >gi|91080725|ref|XP_975392.1| PREDICTED: similar to arginyl-tRNA synthetase [Tribolium castaneum] gi|270005463|gb|EFA01911.1| hypothetical protein TcasGA2_TC007521 [Tribolium castaneum] Length = 671 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 151/618 (24%), Positives = 250/618 (40%), Gaps = 122/618 (19%) Query: 32 IVIERPRDCAHGHLSTNAAMILS---RPLG--LDPLTIAELIVARIKIDPDVDSVFIAGK 86 +VI + G N+AM +S + LG + P IA IV + VD + +AG Sbjct: 112 VVITLSNNAKFGDYQCNSAMQISNIYKQLGKKVSPRDIANKIVENVSPHELVDKLEVAGP 171 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GFIN+++S ++ + LS+I G+ R K +V ++ S N MHVGH R ++ Sbjct: 172 GFINVFVSKAFGLRNLSTIFTHGV---RPPPYKKLRVVVDLSSPNIAKEMHVGHLRSTII 228 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQ 187 GDT+ L+ F G++V R +I D G Q L L F++ + Sbjct: 229 GDTICRLLEFLGHDVLRINHIGDWGTQFGMLIVHLQEKFPDYLSKAPPISDLQAFYKESK 288 Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247 ++ D D + Y GV K S N+ + W Q + + R Sbjct: 289 KRFDEDEDFKKRAYAGVV----------KLQSGDPNYIK-AW---------QLICDVSRK 328 Query: 248 DLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 + + + + D+ + E RG+ S + DI+ L GY+ + D Sbjct: 329 EFQVIYDRLDVKLIE----RGESFYQSRMNDIVKELEAGGYLED--------------DE 370 Query: 305 DRKQLLFRSTMVGDDVDR----PLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSD 359 RK M GD D ++KSDG YTY +DLA K + E D +IYV + Sbjct: 371 GRK------VMWGDKNDGNIPFTVVKSDGGYTYDTSDLATIKQRIVEEKGDWLIYVTDAG 424 Query: 360 HSGYVKRLEAVAAAVS------------------EKKAQINVLLCELVRL---YRDGMPI 398 + L +A + E K + + VRL +G+ Sbjct: 425 QGTHFYILFQIARKIGLLTDNIRVDHVPFGVVLGEDKKKFKTRSGDTVRLIDLLEEGLKR 484 Query: 399 ---KMSKRAGDFI----TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 K+ ++ D + L+ + + +++ L F F K+ E K N Sbjct: 485 ALDKLKEKGRDQVLTPEELKQAQESIAYGCIKYADLSHNRHHEYVFSFDKMLE-DKGNTA 543 Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDF-DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 Y+ YAY R RSI R A F D D+ + I + E E +L L ++P ++ Sbjct: 544 VYLLYAYTRIRSIARTAN--FDDKKIEDVAKSHTISLDHE---KEWKLAKVLLKFPEELD 598 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHG---RENPRLRFVQANNRKLTMMRLQLVHAVA 567 T P+ L Y+Y++A+ F + ++ V+ N+ R+ L A A Sbjct: 599 KVTKDLCPHHLCEYVYEIATTFTEFYDSCYCVEKDSSGDIVKVNHG-----RILLAEATA 653 Query: 568 SIINSGLNIIGVESPNEM 585 ++ L+I+G++ +M Sbjct: 654 RVMAKCLDILGLKPVAKM 671 >gi|320330828|gb|EFW86802.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race 4] Length = 578 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 139/602 (23%), Positives = 247/602 (41%), Gaps = 101/602 (16%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE ++A + D V V IAG GF+N Sbjct: 30 IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPSDEQVSKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + + ++ G +V ++ + N MHVGH R ++GD +A Sbjct: 90 FQN-TAALAARLDAALADAHLSVRKAGAVQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 +++ F G V R+ ++ D G Q L + + + A + SDL E +Y Sbjct: 149 NVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY---------- 195 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263 A + E F E +VK + A + K +++ H ++ ++ Sbjct: 196 RAAKQRFDESEEFAERARGLVVKLQAGDAECLALWTRFKDISLSHCQETYERLNVKLTPA 255 Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 D G+ + + +++++L G + E S Q ++ FR+ DD Sbjct: 256 DVM-GESAYNDDLANVVNDLKATGLLVE-------SNGAQCVFLEE----FRT---ADDT 300 Query: 321 DRPLL--KSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--AAV 374 P++ K+ G Y Y DLA ++ K + D + Y + + + +++ VA A Sbjct: 301 PLPVIVQKAGGGYLYATTDLAAIRYRSKVLKA-DRVQYFVDQRQALHFQQVFEVARRAGF 359 Query: 375 SEKKAQINVLLCELVR-------LYRDGMPIKM-------SKRAGDFIT----------L 410 Q+ + + RDG +K+ +RA + L Sbjct: 360 VHDGMQLEHMGFGTMNGADGRPFKTRDGGTVKLIDLLDEAEERAYTLVKEKNPEVAEAEL 419 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 420 RSIAKAVGISAVKYADLSKHRASDYSFNFDQMLS-FEGNTAPYLLYAYTRVAGVFRKL-- 476 Query: 471 IFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 FD ++ PQE E L LA++ + N P+ L YLYD Sbjct: 477 ---GTPFDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYD 526 Query: 528 LASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 LA +F + + G ENP + RL+L + GL+++G+E+ Sbjct: 527 LAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLE 576 Query: 584 EM 585 M Sbjct: 577 RM 578 >gi|291387790|ref|XP_002710413.1| PREDICTED: arginyl-tRNA synthetase [Oryctolagus cuniculus] Length = 660 Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 135/584 (23%), Positives = 256/584 (43%), Gaps = 75/584 (12%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM + + L ++P IAE I I + ++ IAG GFIN++L + Sbjct: 111 GDYQCNSAMGICQMLKAKEQKVNPREIAENITKHIPNNEYIEKTEIAGPGFINIHLRKDF 170 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + LS+++V+G+ +G+ KV ++F S N MHVGH R ++G++++ L F+ Sbjct: 171 VSEQLSNLLVNGVHLP--ALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFA 228 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215 GY+V R ++ D G Q L + ++ L + DL + +Y + +E Sbjct: 229 GYDVLRINHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFK 287 Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SP 272 K + + + + K I+K + + + + R + + +I + E RG+ Sbjct: 288 KRAYQCVVLLQSKSPDIIKAWKL--ICDVSRQEFNKIYDALEISLIE----RGESFYQDR 341 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + D+++ +G+V + D D ++++F + G + ++KSDG YT Sbjct: 342 MNDVVNEFEEKGFV--------------QVD-DGRKIVF---VPGCSIPLTIVKSDGGYT 383 Query: 333 YFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV----------------- 374 Y +DLA K + +E D +IYV+ S + + + + A A + Sbjct: 384 YDTSDLAAIKQRLFEEKADMIIYVVDSGQALHFQAIFAAAQMIGWYDPKVTRVFHAGFGV 443 Query: 375 --SEKKAQINVLLCELVR---LYRDGMPIKMSK---RAGDFI----TLRHVVDEVGSDSV 422 E K + E VR L +G+ M K + D + L+ V + Sbjct: 444 VLGEDKKKFKTRSGETVRLVDLLEEGLKRSMDKLKEKERDKVLTAEELQAAQTSVAYGCI 503 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 ++ L F F K+ + + N Y+ YA+ R RSI R A ++D ++ + Sbjct: 504 KYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEEMLQK 557 Query: 483 NVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + D E +L + +P +++ + L Y+Y+LA+ F + Sbjct: 558 AARETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYC 617 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R K+ M R+ L AVA++++ G +I+G++ M Sbjct: 618 VEKDRQT-GKVLKVNMWRMLLCEAVAAVMSKGFDILGIKPVQRM 660 >gi|161507929|ref|YP_001577893.1| arginyl-tRNA synthetase [Lactobacillus helveticus DPC 4571] gi|160348918|gb|ABX27592.1| Arginyl-tRNA synthetase [Lactobacillus helveticus DPC 4571] Length = 561 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 142/599 (23%), Positives = 253/599 (42%), Gaps = 108/599 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IERP++ G + A IL++ L +P IA+ I + D + S+ G ++N Sbjct: 25 LIERPKNAKMGDYAF-PAFILAKTLRKNPAMIAQDIAENLSSD-NFASIKAVGP-YVNFA 81 Query: 93 LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + L L ++ YG G+G + I+ S N PM +GH R V+G+++A Sbjct: 82 IDHEKLVSSTLKDVLSEKEHYGDQKFGEGN-IPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 M GY + Y+ D G Q L + Y+ + N+ D+ + ++ +V Sbjct: 141 KTMEKVGYTPIKINYLGDYGTQFGKLIAA----YKH--WGNEEDVKKDPIMNLFHYYV-- 192 Query: 212 ELADKYSSELLNFPE-----EKWLPIVKDYSVQA--MMKIIR----DDL----KALNIQH 256 ++ E N PE +W ++D +A + K R +D K L + Sbjct: 193 ----RFHKEAENNPELDDEGREWFKKLEDGDPEAVKLWKWFREVSLEDFKRIYKELGVTF 248 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D + E F+ ++ +ID L +G ++E S+ Q DM Sbjct: 249 DSYNGEAFFN----DKMQPVIDELKEKGLLHE-------SRGAQVVDMGP---------- 287 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV----- 370 D+ ++KSDG+ Y DLA + + E F M+YV+G++ + + L+ V Sbjct: 288 -DENPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQAQHFVELKTVLKKMG 346 Query: 371 ------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412 +S +K + V L ++++ ++ ++ D Sbjct: 347 YDWSDEIHHVPFGLITQGGKKLSTRKGNV-VFLDQVLKDAVSLAKKQIEEKNPDLADKDQ 405 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAK 469 V +VG +V F L KN L +FDF V+ + P YVQY AR +S+ R+A Sbjct: 406 VAHDVGVGAVIFHDL--KNDRLDNFDFDLDEVVRFEGDTGP--YVQYTNARAQSVLRKAA 461 Query: 470 DIFPDLDFDLFPRNVIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 + P E +F D + LA++PR+I + EP +A + Sbjct: 462 AM-----------GEKPSEGDFALDDDWAFAVAKDLADFPRIIARSADKFEPSVIAKFAL 510 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 DLA F+ ++++ ++ + +++ RL LV A + ++ L ++GV +P EM Sbjct: 511 DLAKKFNKYYAN------VKILTKDDK--IGARLALVQATSIVLTEALRLLGVNAPKEM 561 >gi|256852165|ref|ZP_05557551.1| arginyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN] gi|260661802|ref|ZP_05862713.1| arginyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN] gi|282933663|ref|ZP_06339022.1| arginine--tRNA ligase [Lactobacillus jensenii 208-1] gi|297205670|ref|ZP_06923066.1| arginine--tRNA ligase [Lactobacillus jensenii JV-V16] gi|256615211|gb|EEU20402.1| arginyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN] gi|260547549|gb|EEX23528.1| arginyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN] gi|281302196|gb|EFA94439.1| arginine--tRNA ligase [Lactobacillus jensenii 208-1] gi|297150248|gb|EFH30545.1| arginine--tRNA ligase [Lactobacillus jensenii JV-V16] Length = 558 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 153/622 (24%), Positives = 267/622 (42%), Gaps = 128/622 (20%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD 77 I ++++ K+ ++ + IERP++ G + A IL++ L +P IA+ IVA + D + Sbjct: 11 ISSQVELPKEKINSL-IERPKNPEMGDYAF-PAFILAKTLHKNPAEIAKAIVANLS-DDN 67 Query: 78 VDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 + + G ++N + S L + L ++V YG +G G V I+ S N PM Sbjct: 68 FEKIQAVGP-YVNFSIKKSALISQTLEEVLVKKNNYGNQNLGSGN-VAIDMSSPNIAKPM 125 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 +GH R V+G+++A ++ GY + ++ D G Q L + L+ N+ D+ Sbjct: 126 SMGHLRSTVIGNSIAKILTKVGYTPIKINHLGDYGTQFGKLITAY------KLWGNEEDV 179 Query: 197 PEG-------YYPGVY--------LKHVGK------ELADKYSSELLNFPEEKWLPIVKD 235 + YY + L+ G+ E D + +L N W + Sbjct: 180 KKDPINSLFHYYVKFHEVAEEKPELEDEGRAWFKKLEGGDSEAVKLWN-----WF---RK 231 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 S+Q +I K LN++ D + E ++ + I+D L ++ + E Sbjct: 232 VSLQEFNRI----YKKLNVEFDSYHGEAFYN----DKMDAIVDELRQKDLLVE------- 276 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDN 351 S+ Q D+ G D + + LKSDG+ Y DL Y K Y+ F Sbjct: 277 SRGAQVVDL------------GPDKNPAMILKSDGTSIYTTRDLTAAEYRKKHYD--FVQ 322 Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL- 410 +YV+G++ S Y ++L+ V + + A ++ + + G K+S R G+ + L Sbjct: 323 ALYVVGNEQSAYFEQLKEVLKKMGHEWAD-DIHHIPFGLITQGGK--KLSTRKGNVVFLD 379 Query: 411 ------------------------RHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVK 443 V +EVG +V F L KN L FDF V+ Sbjct: 380 KVLEDAVELAMKQIETKNPSLPNKEQVANEVGIGAVVFHDL--KNDRLDAFDFNLEEVVR 437 Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503 + + P YVQY AR +SI R+A I + DL D + LA Sbjct: 438 FEGETGP--YVQYTNARAQSILRKANQIVTIDELDL-----------SDEWAFAVAKDLA 484 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 ++P V+ A+ EP +A + LA F+ ++++ +R + +++ RL LV Sbjct: 485 DFPAVLAKASEKYEPSIIAKFALKLAKHFNKYYAN------VRILDEDDQ--LAARLALV 536 Query: 564 HAVASIINSGLNIIGVESPNEM 585 A + ++ L+++GV +P EM Sbjct: 537 KATSIVLTESLHLLGVAAPKEM 558 >gi|209695554|ref|YP_002263483.1| arginyl-tRNA synthetase [Aliivibrio salmonicida LFI1238] gi|238065084|sp|B6EI57|SYR_ALISL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|208009506|emb|CAQ79795.1| arginyl-tRNA synthetase [Aliivibrio salmonicida LFI1238] Length = 577 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 139/591 (23%), Positives = 244/591 (41%), Gaps = 98/591 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG +P A+ ++ + +D IAG GFIN++LS +L K Sbjct: 37 GDYQANGVMGVAKRLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + + R + TK NI ++ + N MHVGH R ++GD + + F G+ Sbjct: 97 EAALADE----RLGVALETKQNIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHN 152 Query: 161 VTREYYINDAGAQINTL--ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218 VTR +I D G Q L L + + + SDL EG+Y K+L D+ Sbjct: 153 VTRANHIGDWGTQFGMLIANLERIQKEKGEVSMELSDL-EGFY------RESKKLYDE-- 203 Query: 219 SELLNFPEEKWLPIVKDYSV--QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276 +E++ + Y V Q D K L + + ++ ++ R + S RD Sbjct: 204 -------DEEFAVTARGYVVKLQGGDAFCADMWKKL-VDVTMVQNQRNYDRLNVSLTRDN 255 Query: 277 IDNLARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFR---STMVGDDVDRPLLKSDGS 330 + + +Y +L P + +K + D Q+++ GD + + K DG Sbjct: 256 VMGES----MYNSMLAPIVADLQEKGLAVESDGAQVVYLDEYKNKDGDPMGVIVQKRDGG 311 Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382 + Y D+A K ++E D ++Y + S + V++ V +VS + Sbjct: 312 FLYTTTDIACAKYRFEELNADRVLYFIDSRQHQHLMQAWTIVRKAGYVPESVSLEHHAFG 371 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 ++L +DG P K RAG + L ++DE ++ ++ KN +L + K+ Sbjct: 372 MMLG------KDGRPFKT--RAGGTVRLADLLDEAEQRAI--ALIEEKNKDLSTEEKAKI 421 Query: 443 ---------------KEQSKE-------------NPVFYVQYAYARCRSIFRQAKDIFPD 474 K ++ + N Y+QYAY R SIF +A D Sbjct: 422 ATTVAMAAVKYSDLSKHRTTDYIFDWDNILAFEGNTAPYMQYAYTRVASIFSKA-----D 476 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 L D N+ + D E LI L ++ ++ +P+ + YL++LA F Sbjct: 477 LSMD----NLAGEVKITDEKEKALITKLMQFEEAVQAVASEGQPHLMCAYLFELAGQFSS 532 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + ++ + RL+L A I GL+++G+E+ M Sbjct: 533 FYEA------CPILNNDDESIKQSRLKLAALTAKTIKQGLDLLGIETLERM 577 >gi|104773879|ref|YP_618859.1| arginyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|123378467|sp|Q1GAN1|SYR_LACDA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|103422960|emb|CAI97631.1| Arginyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 565 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 152/604 (25%), Positives = 258/604 (42%), Gaps = 113/604 (18%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + IERP+D G + L++ + P IA + KID A +IN Sbjct: 25 VKIERPKDEKLGDYAF-PTFTLAKTMRKAPNLIAAELAE--KIDQGSFEKVEAVGPYINF 81 Query: 92 YLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +L S IL I+ YG +G G V E+ S N PM +GH R ++G+ + Sbjct: 82 FLDKSQTGAAILQEILADPENYGARDLGHGRNVLTEYSSPNIAKPMGMGHLRSTMIGEAI 141 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE-------GYYPG 203 A ++A G++ R Y+ D G Q + + ++ ND+D+ + YY Sbjct: 142 ARILAKEGFKPIRIDYLGDWGTQFGKMMAAY------KMWGNDADIEKDPINTLLSYY-- 193 Query: 204 VYLKHVGKELAD------KYSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDDLKALNIQ 255 V + +E + ++ S+L + EE + ++ S++ K+ L++ Sbjct: 194 VRINREAEEHPEYDEDGREWFSKLEHGDEEAKRLWSWFREVSLERFKKV----YDMLDVH 249 Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315 D F E + PI+ + R+ +G+L KS+ + D+++ L Sbjct: 250 FDSFTGEAFSAQMMDKPIQ-----ILRE----KGLLV--KSQGAEIVDLEKYNL------ 292 Query: 316 VGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 PL+ KS+G+ TY DLA Y K Y GF IYV+G + Y ++L A Sbjct: 293 ------PPLMVIKSNGTSTYITRDLATAMYRKKTY--GFYKSIYVVGQEQEVYFQQLRAC 344 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------- 416 + A +++ + +G KMS R G+ + L V++E Sbjct: 345 LKEMGFDWAD-DIVHISFGLMSINGQ--KMSTRKGNVVNLEDVLNESVDLARKQISEKNV 401 Query: 417 -----------VGSDSVRFMML--WRKNSELLDFDFCKV-KEQSKENPVFYVQYAYARCR 462 VG +V F L +R+N +DF+ +V K + + P YVQYA AR Sbjct: 402 GLKNADEVAKQVGIGAVVFHDLKNYRRNP--IDFNLEEVVKFEGETGP--YVQYARARGE 457 Query: 463 SIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 S+ R++ F D D ++ E L+ +A Y I+ A +P + Sbjct: 458 SLLRKSGITDFSDADL-----------TKIGAEEWDLVSFMARYADTIQKAMETYDPSAI 506 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 A Y +LA F+ +++H R V + + RL +V AV+ +I S L+++ V++ Sbjct: 507 AKYALELAKRFNKYYAHTR-----ILVDDVDEDVKKARLAVVQAVSHVIKSALDLLDVKA 561 Query: 582 PNEM 585 P+EM Sbjct: 562 PDEM 565 >gi|220931665|ref|YP_002508573.1| arginyl-tRNA synthetase [Halothermothrix orenii H 168] gi|254782967|sp|B8CWA9|SYR_HALOH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|219992975|gb|ACL69578.1| arginyl-tRNA synthetase [Halothermothrix orenii H 168] Length = 566 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 140/565 (24%), Positives = 252/565 (44%), Gaps = 92/565 (16%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGK 119 P IAE I ++I+ + V G ++N +++ + +L I+ G YG IGK Sbjct: 54 PNIIAEEIASKIEGNSYFSKVVNTGP-YVNFFINKEIFAETVLEEILQKGKYYGARNIGK 112 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G V +EF S N P H+GH R V+G L ++ F GY ++ D G Q L + Sbjct: 113 GKNVIVEFSSPNIAKPFHIGHIRTTVIGHALRNIYNFLGYNAIAINHLGDYGTQFGKLIV 172 Query: 180 SVF-WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK---WLPIVKD 235 ++ W + + +N +PE + +Y+K E A+K + EL EEK W +++ Sbjct: 173 ALNKWGDKDKIKSN--PIPE--FLKLYIKF--HEEAEK-NPEL----EEKARSWFNRLEN 221 Query: 236 YSVQAM--MKIIRD-DLKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEG 289 +AM K IR+ LK +D+ + D + G+ + D+I+ + +G + E Sbjct: 222 KDEEAMDLWKWIRNMSLKEFKRVYDMLGIDFDSYAGESFYSDMMPDVIEEMEEKGLLQE- 280 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA---YFKCKYE 346 S+ + D++ + M+ KSDGS Y D+A Y K Y Sbjct: 281 ------SQGAKIVDLEEYNM--PPAMIE--------KSDGSTLYITRDIAAAIYRKKTY- 323 Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406 F IYV+GS + + + + + A+ + + + DG MS R G Sbjct: 324 -NFYKNIYVVGSQQKLHFDQWFKIIELMGHEWARDCIHVPFGMVSLEDGT---MSTRKGR 379 Query: 407 FITLRHVVDE-------------------------VGSDSVRFMMLWRKNSELLDFDFCK 441 + L V+++ VG +V F L+ NS + D+ F Sbjct: 380 VVFLEDVLNKAIEKTKETIEDKNPDLENKEEVAKIVGIGAVIFQELY--NSRIKDYVFSW 437 Query: 442 VKEQSKENPVF-YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500 + S E YVQY Y R +S+ ++ F LD +++ E F+ +L Sbjct: 438 DRTLSFEGETGPYVQYTYVRTKSVLNKSNYKFKKLD----DYSLLTDEDAFNVIKL---- 489 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 ++++P I A+ EP + ++ +LA F+ ++ + + +++K+ RL Sbjct: 490 -ISQFPDTIIKASERYEPSIITRHITELAKAFNKYYHDNQ-------ILVDDQKVREARL 541 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 LV+AV +++ +GL+++G+++P +M Sbjct: 542 FLVYAVNTVLKTGLSLLGIKTPEKM 566 >gi|282899871|ref|ZP_06307832.1| Arginyl-tRNA synthetase, class Ic [Cylindrospermopsis raciborskii CS-505] gi|281195141|gb|EFA70077.1| Arginyl-tRNA synthetase, class Ic [Cylindrospermopsis raciborskii CS-505] Length = 585 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 146/586 (24%), Positives = 239/586 (40%), Gaps = 93/586 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N A+ LS+ LG+ P IA IV + + + IAG GFINL L SYL L Sbjct: 40 GDFQANVALSLSKKLGMQPRAIATSIVEELDVSDMCEVPEIAGPGFINLKLQTSYLESQL 99 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 ++I G + + K ++F S N MHVGH R ++GD +A ++ F G++V Sbjct: 100 NAIKTDP-RLGVTRVDQPEKQIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFRGHQVL 158 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYN----NDSDLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + Y QAL N DL Y ++ ++ Sbjct: 159 RLNHVGDWGTQFGMLIAYLREVYPQALTTANVLNIGDLVSFY----------RQAKQRFD 208 Query: 219 SELLNFPEEKWLPIVK--------DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 ++ +F E +VK ++ + + R + + + DI I E RG+ Sbjct: 209 AD-ASFQERARQEVVKLQAGAEDTTHAWKLLCAQSRKEFQTIYDLLDIKIIE----RGES 263 Query: 271 --SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 +P + I+ +L G V E KC L + G+ + + KS Sbjct: 264 FYNPFLSKIVKDLETAGLVEE--------NQGAKCVF----LEGFTNREGEALPLIVQKS 311 Query: 328 DGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386 DG Y Y DLA + E +IYV + + + + VA A + ++ Sbjct: 312 DGGYNYATTDLAALLYRIREDQAKRIIYVTDAGQANHFAQFFQVAQKAGWIPADVELVHI 371 Query: 387 EL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------------- 416 + L DG K R+GD + L+ ++DE Sbjct: 372 PFGLVLGEDGK--KFKTRSGDTVRLKDLLDEAVFRARTDLEARLQQEGRQETPEFIQNVA 429 Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 VG +V++ L + + F + K+ K N Y+ YAY R + I R+ K F + Sbjct: 430 QTVGISAVKYADLSQNRTSSYVFSYDKMLS-LKGNTAPYMLYAYVRTQGISREGKIDFEN 488 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 L D +I QE +EL L +L + ++ P +L YLY+L+ F+ Sbjct: 489 LAPDA---KIILQEE----TELALAKNLLQLDEILYQVEQDLLPNRLCDYLYNLSEKFNK 541 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + R ++A + + RL L + A + GLN++G++ Sbjct: 542 FYD------RCPVLKAED-PIRTSRLMLCYLTAKTLRLGLNLLGIK 580 >gi|294783524|ref|ZP_06748848.1| arginine--tRNA ligase [Fusobacterium sp. 1_1_41FAA] gi|294480402|gb|EFG28179.1| arginine--tRNA ligase [Fusobacterium sp. 1_1_41FAA] Length = 569 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 138/574 (24%), Positives = 251/574 (43%), Gaps = 74/574 (12%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AMI S+ +G +P IAE I A+ V+ + +AG GFIN++L+ YL + Sbjct: 39 GDYQCNFAMINSKIIGDNPRKIAEEIKAKFPYGEIVEKLEVAGPGFINIFLTDKYLSDSI 98 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 I G Y + + + KV I+F S N MH+GH R ++G+++A +M + GY+V Sbjct: 99 KKI---GEAYDFSFLNRKGKVIIDFSSPNIAKRMHIGHLRSTIIGESVARIMRYLGYDVV 155 Query: 163 REYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221 + +I D G Q L + W ++A N + E VY+K +E S E Sbjct: 156 ADNHIGDWGTQFGKLIVGYRKWLNREAYEKNAIEELE----RVYVK-FSEEAEKDPSLED 210 Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281 L E K + ++ + + + I + LK N ++ D + G+ S D++ ++ Sbjct: 211 LARAELKKVQDGEEENTKLWKEFITESLKEYNKLYERLDVHFDTYYGE-SFYNDMMADVV 269 Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341 ++ + + +K D K LF + K DG+Y Y +D+A Sbjct: 270 KELEEKKLAVDDDGAKVVF---FDEKDNLFPCI---------VQKKDGAYLYSTSDIATV 317 Query: 342 KCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400 K + + + MIY+ + + K+ + + + ++ ++R + DG+ + Sbjct: 318 KFRKDNYDVNKMIYLTDARQQDHFKQFFKITDMLGWDIEKYHIWFG-IIR-FADGI---L 372 Query: 401 SKRAGDFITLRHVVDE---------------------------VGSDSVRFMMLWRKNSE 433 S R G+ I L ++DE VG SV++ L + Sbjct: 373 STRKGNVIKLEELLDEAHSRAYDVVNEKNPNLSEEEKQNIAEVVGVSSVKYADLSQNKQS 432 Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493 + F++ K+ + N Y+ Y YAR +SI R+ + + +L I E++ + Sbjct: 433 DILFEWDKML-SFEGNTAPYLLYTYARIQSILRK----IDEQNIELNDSVEIKIENKIER 487 Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553 S L HL +P + A +P +A YLYDL+ + +++ P L N+ Sbjct: 488 S---LATHLLTFPISVLKAAETFKPNLIADYLYDLSKKLNSFYNNC---PIL------NQ 535 Query: 554 KLTMM--RLQLVHAVASIINSGLNIIGVESPNEM 585 + + R L+ ++ GL+++G+ N+M Sbjct: 536 DIDTLKSRALLIKKTGEVLKEGLSLLGIPVLNKM 569 >gi|304440484|ref|ZP_07400371.1| arginine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304370962|gb|EFM24581.1| arginine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 569 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 128/568 (22%), Positives = 249/568 (43%), Gaps = 79/568 (13%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIE 111 L++ +P IAE + A IK + + V G +IN + + L K ++ I Sbjct: 46 LAKIFRKNPNMIAEEMAASIKSEY-FEKVENKG-AYINFFTNKEVLAKTVVEEISKEKEN 103 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG++ +G+G V +E+ S N P H+GH R ++GD+L + F GY V ++ D G Sbjct: 104 YGKSKLGEGKTVIVEYSSPNIAKPFHIGHIRSTIIGDSLKRIHKFLGYNVVSINHLGDYG 163 Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231 Q L ++ + N ++ + P + +V + E+ + Sbjct: 164 TQFGMLIYAI------KNWGNIEEIEKNPIPELLKLYVRVNTEADQNEEIKEECRHYFAS 217 Query: 232 IVK-DYSVQAMMKIIRD-DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 + K D + IR+ LK NI +D+ + D + G+ ++ + R + G Sbjct: 218 LEKGDEDAVKIWTWIREISLKEFNIVYDLLGIKFDSYNGESFYSDKMMKQVERMEKL--G 275 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYE 346 IL S+ + D+++ L P +LKSDGS Y D+A + ++E Sbjct: 276 ILKD--SEGAKIVDLEKYNL-------------PPALILKSDGSTIYITRDIAAAEYRHE 320 Query: 347 RGF-DNMIYVMGSDHSGYVKRLEAVA-----------------------AAVSEKKAQIN 382 + IYV+ ++ + + K+L+AV +S ++ ++ Sbjct: 321 TYHPEKNIYVVATEQNLHFKQLKAVLKEMQYDWYDEVTHVAFGMINLADGKLSTRQGRVV 380 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITL---RHVVDEVGSDSVRFMMLWRKNSELLDFDF 439 L+ L + M I + + + + +VG +++F L+ + + FD+ Sbjct: 381 YLIDVLNKAIEKIMEILNEREETSGVKIANKEELAKQVGIGAIKFQELFNQRIKDYTFDW 440 Query: 440 CKVKE-QSKENPVFYVQYAYAR-CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497 K + + P YVQYA+AR C + + DI ++D L + E+ Sbjct: 441 DKTLSFEGESGP--YVQYAHARICSLLEKGGFDINKEVDSSLLNNEM----------EIN 488 Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557 ++ +L ++ V+E+A EP+ ++ Y+ +LA F+ +++ + + KL Sbjct: 489 ILRNLYKFTEVVEDAKEKYEPFFISRYVVELAKDFNKYYNQVT-------INVEDEKLKN 541 Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L ++V ++I+ GL ++G+E+P +M Sbjct: 542 TRLMLCYSVKNVISEGLRLLGIEAPEKM 569 >gi|332238981|ref|XP_003268683.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic [Nomascus leucogenys] Length = 660 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 141/598 (23%), Positives = 250/598 (41%), Gaps = 103/598 (17%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S+ L ++P IAE I + + ++ V IAG GFIN++L + Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDF 170 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + L+S++V+G+ +G+ KV ++F S N MHVGH R ++G++++ L F+ Sbjct: 171 VSEQLTSLLVNGVRLPA--LGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFA 228 Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198 GY+V R ++ D G Q L L +F++ + ++ + + + Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQLFYKESKKRFDTEEEFKK 288 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y V L GK N K ++ D S Q KI D L I+ Sbjct: 289 RAYQCVVLLQ-GK-----------NPDITKAWKLICDVSRQEFNKIY-DTLDISLIERGE 335 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 +D + DI+ +G+V + D D ++++F + G Sbjct: 336 SFYQDRMY--------DIVKEFEDRGFV--------------QLD-DGRKIVF---VPGC 369 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV--- 374 + ++KSDG YTY +DLA K + +E D +IYV+ + S + + + A A + Sbjct: 370 SIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHFQTIFAAAQMIGWY 429 Query: 375 ----------------SEKKAQINVLLCELVRLYR---DGMPIKMSK---RAGDFI---- 408 E K + E VRL +G+ M K + D + Sbjct: 430 DPKVTPVFLAGFGVVLGEDKKKFKTRSGETVRLVDLLGEGLKRSMDKLKEKERDKVLTAE 489 Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 L + +++ L F F K+ + K N Y+ YA+ R RSI R A Sbjct: 490 ELNAAQTSIAYGCIKYADLSHNRLNDYVFSFDKMLD-DKGNTAAYLLYAFTRIRSIARLA 548 Query: 469 KDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 ++D ++ + + D E +L + +P +++ + L Y+Y+ Sbjct: 549 -----NIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYE 603 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA+ F + + R K+ M R+ L AVA+++ G +I+G++ M Sbjct: 604 LATTFTEFYDSCYCVEKDRQT-GKILKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660 >gi|257058437|ref|YP_003136325.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 8802] gi|256588603|gb|ACU99489.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 8802] Length = 585 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 149/584 (25%), Positives = 247/584 (42%), Gaps = 91/584 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N A+ L++ LG P IA+ I+ + ++ + IAG GFIN+ + P+YL L Sbjct: 40 GDYQANIALSLAKKLGEQPRAIAQKIIDNLSLEDLGELPTIAGPGFINIKIKPTYLATQL 99 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + + G K+ ++F S N MHVGH R ++GD +A ++ G++V Sbjct: 100 K-VQQNSSSLGVTKADPIEKIIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEVRGHQVL 158 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222 R ++ D G Q L + Y AL D+ L G Y + A K E Sbjct: 159 RLNHVGDWGTQFGMLIAYLAEVYPDALTTADA-LDIGDLVTFYKQ------AKKRFDEDE 211 Query: 223 NFPEEKWLPIVK--------DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP--SP 272 F E +VK ++ Q + + R + + + DI I+E RG+ +P Sbjct: 212 KFQETARNQVVKLQAGDSQTRHAWQLLCEQSRREFQVIYDILDINITE----RGESFYNP 267 Query: 273 -IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + DI+ L QG + K +C L + GD + + KSDG Y Sbjct: 268 LLEDIVKELDHQGLL--------KKDAGAQCVF----LDGFTNKSGDPLPLIVQKSDGGY 315 Query: 332 TYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCEL 388 Y DLA K + + + +IYV + + + ++ VA A + K +I + L Sbjct: 316 NYATTDLAALKYRITQDQAERIIYVTDAGQANHFAQVFQVAKKAHIIPKNVEIIHVPFGL 375 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------------V 417 V+ DG K+ R+G I LR ++DE V Sbjct: 376 VK-GEDGK--KLKTRSGTTIKLRDLLDEAVIYARQDLEKRLAEEGRQESEDFIANVSQVV 432 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G +V++ L + + F + K+ + N Y+ YAYAR +SI R+ ++DF Sbjct: 433 GISAVKYADLSQNRTSDYIFSYDKMLA-LQGNTAPYMLYAYARIQSISREG-----NIDF 486 Query: 478 DLFPR--NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + + +I QE +E++L +L + VIE P +L YLY+L+ F+ Sbjct: 487 ESLQQEAKIILQEE----TEIELGKYLLQLSEVIEEVEKTLLPNRLCDYLYELSKKFNRF 542 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 + + P L+ + L RL L A + GL+++G+ Sbjct: 543 YENC---PVLK----SEEPLRTSRLLLCDLTARTLKLGLSLLGI 579 >gi|296192722|ref|XP_002744196.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic [Callithrix jacchus] Length = 660 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 136/590 (23%), Positives = 260/590 (44%), Gaps = 87/590 (14%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S+ L ++ IAE I + + ++ V IAG GFIN++L + Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNTREIAENITKHLPDNEYIEKVEIAGPGFINVHLRKDF 170 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + L++++V+G++ +G+ KV ++F S N MHVGH R ++G++++ L F+ Sbjct: 171 VSEQLTNLLVNGVKLP--ALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESVSRLFEFA 228 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215 GY+V R ++ D G Q L + ++ L + SDL + +Y + +E Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPISDL-QAFYKESKKRFDTEEEFK 287 Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SP 272 K + + + + K I+K +++ + + R + + D+ + E RG+ Sbjct: 288 KRAYQCVVLLQGKNPDIIKAWNL--ICDVSRQEFNKIYEALDVTLVE----RGESFYQDR 341 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + D++ +G+V + D D ++++F + G + ++KSDG YT Sbjct: 342 MNDVVKEFEDRGFV--------------QVD-DGRKIVF---VPGCSIPLTIVKSDGGYT 383 Query: 333 YFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV----------------- 374 Y +DLA K + +E D +IYV+ S S + + + A A + Sbjct: 384 YDTSDLAAIKQRLFEEKADMIIYVVDSGQSVHFQTIFAAAQMIGWYDPKVTRVSHAGFGV 443 Query: 375 --SEKKAQINVLLCELVRLY---RDGMPIKMSK---RAGDFITLRHVVD----EVGSDSV 422 E K + E VRL +G+ M K + D + +D V + Sbjct: 444 VLGEDKKKFKTRSGETVRLMDLLEEGLKRSMDKLKEKQRDKVLTAEELDAAQTSVAYGCI 503 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 ++ L F F K+ + + N Y+ YA+ R RSI R A ++D ++ + Sbjct: 504 KYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEEMLQK 557 Query: 483 NVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW----- 536 + D E +L + +P +++ + L Y+Y+LA+ F + Sbjct: 558 AARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYC 617 Query: 537 -SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R+ ++ K+ M R+ L AVA+++ G +I+G++ M Sbjct: 618 VEKDRQTGKI-------LKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660 >gi|56403814|emb|CAI29693.1| hypothetical protein [Pongo abelii] Length = 659 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 141/597 (23%), Positives = 251/597 (42%), Gaps = 102/597 (17%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S+ L ++P IAE I + + ++ V IAG GFIN++L + Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDF 170 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + L+S++V+G++ +G+ KV ++F S N MHVGH R ++G++++ L F+ Sbjct: 171 VSEQLTSLLVNGVQLPA--LGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFA 228 Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198 GY+V R +I D G Q L L F++ + ++ + + + Sbjct: 229 GYDVLRLNHIGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKKRFDTEEEFKK 288 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y V L GK N K ++ D S Q + KI AL++ + Sbjct: 289 RAYQCVVLLQ-GK-----------NPDITKAWKLICDVSRQELNKI----YDALDVS--L 330 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + F++ + DI+ +G+V + D D ++++F + G Sbjct: 331 IERGESFYQ---DMMNDIVKEFEDRGFV--------------QVD-DGRKIVF---VPGC 369 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374 + +LKSDG YTY +DLA K + +IYV+ + S + + + A A + Sbjct: 370 SIPLTILKSDGGYTYDTSDLAAIKQRLFEEKAMIIYVVDNGQSVHFQTIFAAAQMIGWYD 429 Query: 375 ---------------SEKKAQINVLLCELVRLYR---DGMPIKMSK---RAGDFI----T 409 E K + E VRL +G+ M K + D + Sbjct: 430 PKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSMDKLKEKERDKVLTAEE 489 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 L + V++ L F F K+ + K N Y+ YA+ R RSI R A Sbjct: 490 LNAAQTSIAYGCVKYADLSHNRLNDYIFSFDKMLD-DKGNTAAYLLYAFTRIRSIARLA- 547 Query: 470 DIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 ++D ++ + + D E +L + +P +++ + L Y+Y+L Sbjct: 548 ----NIDEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYEL 603 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A+ F + + R K+ M R+ L AVA+++ G +I+G++ M Sbjct: 604 ATTFTEFYDSCYCVEKDRQT-GKILKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 659 >gi|332971551|gb|EGK10501.1| arginine--tRNA ligase [Kingella kingae ATCC 23330] Length = 568 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 134/591 (22%), Positives = 245/591 (41%), Gaps = 94/591 (15%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 IV++ +D HG N M ++ G +P +A+ + + + S +AG GFINL Sbjct: 25 IVLQPAKDAKHGDFQINGVMGAAKKAGQNPRELAQKVADELHGKGAIASAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+ +L + L+S ++ IE N V I++ S N MHVGH R +++GD+LA Sbjct: 85 RLAADFLAENLNSGSLN-IEKTPN----PQTVVIDYSSPNLAKEMHVGHLRSSIIGDSLA 139 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK---- 207 ++AF G+ V R+ ++ D G Q L + + Q +DL E +Y ++ Sbjct: 140 RVLAFLGHNVIRQNHVGDWGTQFGMLVAYLVEQQQDNAEFKLADL-EQFYRNAKVRFDED 198 Query: 208 HVGKELADKYSSELLNFPE------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 +LA +Y +L ++++ I ++ K+ L +Q Sbjct: 199 AAFADLAREYVVKLQGGDAAVLALWQQFVEISLQHAEAVYAKL------GLKLQRADVAG 252 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E ++ ++++ID L +G E D +++F D + Sbjct: 253 ESSYN----DDLQNVIDELTAKGLAVES---------------DGAKVVFLDEFKNKDGE 293 Query: 322 RPLL---KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 K G + Y D A + + + G + ++YV+ + + K+L + + Sbjct: 294 PAAFIVQKQGGGFLYATTDFACMRYRVGKLGANRLMYVVDTRQDLHFKQLFSASRKAGWL 353 Query: 378 KAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416 ++ + +DG P K R+GD + L ++DE Sbjct: 354 PENVSAEFIGFGTMMGKDGKPFKT--RSGDTVKLVDLLDEAVERATALVREKNADLSAEE 411 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 VG +V++ L + + FD+ + + N Y+QYAY R +S+F++A Sbjct: 412 VAQIGEVVGIGAVKYADLSKNRTSDYVFDWDNMLS-FEGNTAPYLQYAYTRVQSVFKKAG 470 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 + NV E QL V L ++ V+ + P+ LA YLY LA Sbjct: 471 EW-----------NVQAALKLEQPLEQQLAVELLKFEDVVASVAETSYPHYLAAYLYQLA 519 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 ++F + P L+ Q + R RL+L A + +GL+++G++ Sbjct: 520 TLFSRFY---EACPILK-AQGDVRD---SRLKLAKLTAETMKTGLDLLGID 563 >gi|56808424|ref|ZP_00366172.1| COG0018: Arginyl-tRNA synthetase [Streptococcus pyogenes M49 591] Length = 492 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 126/535 (23%), Positives = 231/535 (43%), Gaps = 86/535 (16%) Query: 88 FINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 +IN +L + ++L ++ +G +Y + G+G V I+ S N P +GH R V+ Sbjct: 7 YINFFLDKVKISSQVLEQVITAGSDYAQQDEGQGRNVAIDMSSPNIAKPFSIGHLRSTVI 66 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVY 205 GD+LA++ A GY+ + ++ D G Q L ++ W + A+ + D Y + Sbjct: 67 GDSLANIFAKMGYQPVKINHLGDWGKQFGMLIVAYKKWGDEAAVQAHPIDELLKLYVRIN 126 Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISE 262 + D+ + E W ++D +A + + RD+ L N +D Sbjct: 127 AEAEIDPTVDEEARE--------WFRKLEDGDKEATELWQWFRDESLLEFNRLYDQLHVT 178 Query: 263 DDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319 D + G+ + +++D L + + E SK Q ++++ Sbjct: 179 FDSYNGEAFYNDKMDEVLDLLEAKNLLVE-------SKGAQVVNLEKY-----------G 220 Query: 320 VDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV---- 370 ++ P L KSDG+ Y DLA Y K Y+ F +YV+G++ + + K+L+AV Sbjct: 221 IEHPALIKKSDGATLYITRDLAAALYRKRTYD--FAKSVYVVGNEQAAHFKQLKAVLKEM 278 Query: 371 -------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 A +S +K + +LL V + ++ + + Sbjct: 279 GYDWSDDMTHVAFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKE 337 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 V VG +++F L DFD V + + P YVQYA+AR +SI R+A Sbjct: 338 AVAHAVGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAD- 394 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 F + S D ++I + ++PR+I+ + EP +A + +LA Sbjct: 395 ---------FTPSATTTYSLADAESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQ 445 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ +++H R + N+ + RL L +A A+++ L ++GV++PNEM Sbjct: 446 SFNKYYAH------TRILDDNSERDN--RLVLCYATATVLKEALRLLGVDAPNEM 492 >gi|12847471|dbj|BAB27583.1| unnamed protein product [Mus musculus] Length = 660 Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 138/584 (23%), Positives = 257/584 (44%), Gaps = 75/584 (12%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S+ L + P IAE I + + +D V IAG GFIN++L + Sbjct: 111 GDYQCNSAMGISQMLKAKEQKVSPREIAENITKHLPNNKYIDKVEIAGPGFINVHLRKDF 170 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + L+S +V+G++ ++G KV ++F S N MHV H R ++G++++ L F+ Sbjct: 171 VSEQLTSHLVNGVQLP--VLGDKEKVIVDFSSPNIAKEMHVVHLRSTIIGESMSRLFEFA 228 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215 GY+V R ++ D G Q L + ++ L + DL + +Y + E Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDADEEFK 287 Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SP 272 K + + + + K I+K +++ + + R++ K + DI + E RG+ Sbjct: 288 KRAYQCVVLLQSKNPDIMKAWNL--ICDVSREEFKKIYDALDITLIE----RGESFYQDR 341 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 ++DI+ +G+V + D D ++++F + G V ++KSDG YT Sbjct: 342 MKDIVKEFEDKGFV--------------QVD-DGRKIVF---VPGCSVPLTIVKSDGGYT 383 Query: 333 YFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV----------------- 374 Y +DLA K + +E + +IYV+ + + + + + A A + Sbjct: 384 YDTSDLAAIKQRLFEEKANKIIYVVDNGQAIHFQTIFAAAQMIGWYDPKVTLVTHVGFGV 443 Query: 375 --SEKKAQINVLLCELVRLY---RDGMPI---KMSKRAGDFI----TLRHVVDEVGSDSV 422 E K + E VRL +G+ K+ ++ D + L+ V + Sbjct: 444 VLGEDKKKFKTRSGETVRLMDLLEEGLKRSLDKLKEKERDKVLTEEELKAAQTSVAYGCI 503 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 ++ L F F K+ + + N Y+ YA+ R RSI R A ++D + R Sbjct: 504 KYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEAMLQR 557 Query: 483 NVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + D E +L + +P +++ + L Y+Y+LA+ F + Sbjct: 558 AARETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYC 617 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R K+ M R+ L AVA+++ G +I+G++ M Sbjct: 618 VEKDRQT-GKVLKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 660 >gi|312978134|ref|ZP_07789879.1| arginine--tRNA ligase [Lactobacillus crispatus CTV-05] gi|310895109|gb|EFQ44178.1| arginine--tRNA ligase [Lactobacillus crispatus CTV-05] Length = 561 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 139/596 (23%), Positives = 253/596 (42%), Gaps = 102/596 (17%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IERP++ G + A IL++ L +P IA+ I + D + ++ G ++N Sbjct: 25 LIERPKNAKMGDYAF-PAFILAKTLHKNPAEIAKNIADNLSSD-NFANIQAVGP-YVNFA 81 Query: 93 LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + L L ++ YG IG+G V I+ S N PM +GH R V+G+++A Sbjct: 82 IDHEKLVSSTLKDVLTEKEHYGDQKIGEGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 M GY + Y+ D G Q L + Y+ + N+ D+ + ++ +V Sbjct: 141 KTMEKVGYTPVKINYLGDYGTQFGKLIAA----YKH--WGNEEDVKKDPIMNLFHYYVKF 194 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAM----------MKIIRDDLKALNIQHDIFIS 261 + + EL N E W ++D +A+ +K + K L + D + Sbjct: 195 HQEAEKNPELDNEGRE-WFKKLEDGDPEAVKLWKWFREVSLKDFKRIYKELGVTFDSYNG 253 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E F+ ++ +ID L +G ++E S+ Q DM + Sbjct: 254 EAFFN----DKMQPVIDELKEKGLLHE-------SRGAQVVDMGEGE------------- 289 Query: 322 RP--LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV-------- 370 P ++KSDG+ Y DLA + + E F M+YV+G++ + + L+ V Sbjct: 290 NPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQAQHFVELKTVLKKMGYDW 349 Query: 371 ---------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 +S +K + V L ++++ ++ ++ D V Sbjct: 350 ADEIHHVPFGLITQGGKKLSTRKGNV-VFLDQVLKDAVSLAKKQIQEKNPDLADQDQVAH 408 Query: 416 EVGSDSVRFMMLWRKNSELLDFDF---CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 +VG +V F L KN L +FDF V+ + P YVQY AR +S+ R+A + Sbjct: 409 DVGVGAVVFHDL--KNDRLDNFDFDLEEVVRFEGDTGP--YVQYTNARAQSVLRKAAAMG 464 Query: 473 PDLDFDLFPRNVIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 + P E++ D + LA++PR++ + EP +A + DLA Sbjct: 465 EN-----------PSETDLALDDDWAFAVAKDLADFPRIVARSAEKFEPSVIAKFALDLA 513 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ ++++ ++ + +++ RL LV A + ++ L ++GV +P EM Sbjct: 514 KKFNKYYAN------VKILTKDDK--IGARLALVQATSIVLTESLRLLGVNAPKEM 561 >gi|218752997|ref|ZP_03531793.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503] Length = 184 Score = 112 bits (279), Expect = 2e-22, Method: Composition-based stats. Identities = 64/162 (39%), Positives = 97/162 (59%), Gaps = 3/162 (1%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LK + + ++ L ++V +ERPR HG ++N AM L++ +G +P Sbjct: 4 ADLAELLKATAAAVLAERGLDASALPQMVTVERPRIPEHGDYASNLAMQLAKKVGTNPRE 63 Query: 64 IAE-LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +A L A K+D + S +AG GFIN+ L + K+++S++ +G YG +L+ G K Sbjct: 64 LAGWLAEALTKVD-GIASAEVAGPGFINMRLETAAQAKVVTSVIDAGHSYGHSLLLAGRK 122 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164 VN+EFVSANPTGP+H+G R A VGD L L+ G +V RE Sbjct: 123 VNLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGADVVRE 164 >gi|296875585|ref|ZP_06899656.1| arginine--tRNA ligase [Streptococcus parasanguinis ATCC 15912] gi|296433382|gb|EFH19158.1| arginine--tRNA ligase [Streptococcus parasanguinis ATCC 15912] Length = 562 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 148/605 (24%), Positives = 248/605 (40%), Gaps = 120/605 (19%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E+P+ G ++ A L++ P IA I KID +A ++N + Sbjct: 26 LLEQPKSSDLGDIAF-PAFSLAKVERKAPQAIAADIAE--KIDQSAFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + +++ S++ +G +YG+ G G + I+ S N P VGH R V+GD L+ Sbjct: 83 LDKSKISDQVIKSVIEAGADYGQQDEGHGQNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY + ++ D G Q L ++ W ++A+ N D Sbjct: 143 NIFRKMGYNTIKINHLGDWGKQFGLLMVAYKKWGSKEAVEANPID--------------- 187 Query: 211 KELADKY---SSELLNFPE-----EKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIF 259 EL Y ++E+ N PE KW ++D +A + + RD+ L N + + Sbjct: 188 -ELLKLYVRINAEIENDPELDEEGRKWFKKLEDGDPEATELWQWFRDESLVEFNRIYKLL 246 Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319 E D G+ + D +D Q +G+L K + + D D Sbjct: 247 GVEFDSLNGE-AFYNDKMDE-GVQILEDKGLLKESKGASIVELD---------------D 289 Query: 320 VDRP---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373 V+ P + KSDG+ Y D+A Y Y F IY +G + S + ++L+AV Sbjct: 290 VNLPPAMIKKSDGATLYITRDIATAMYRARTY--NFVKNIYAVGQEQSNHFRQLKAVLKK 347 Query: 374 V----SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------- 416 + S+ ++ L R K+S R G+ I L + E Sbjct: 348 MGFDWSDDMVHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLQEAISRAKAQIEEKN 400 Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRS 463 VG +V+F L DFD V + + P YVQYAYAR +S Sbjct: 401 PELENKEEVAHAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YVQYAYARIQS 458 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+A F + S D ++I L ++ RV++ A +P +A Sbjct: 459 ILRKAN----------FTPSTDATYSLSDPESWEIIKLLQDFSRVVKRAAENYDPSLIAK 508 Query: 524 YLYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 Y +LA F+ +++H R E+P RL L ++ A ++ L ++GV+ Sbjct: 509 YAINLAQAFNKYYAHTRILDESPERE-----------SRLALSYSTAVVLKEALRLLGVD 557 Query: 581 SPNEM 585 +P +M Sbjct: 558 APEKM 562 >gi|315038946|ref|YP_004032514.1| arginyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112] gi|325957356|ref|YP_004292768.1| arginyl-tRNA synthetase [Lactobacillus acidophilus 30SC] gi|312277079|gb|ADQ59719.1| arginyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112] gi|325333921|gb|ADZ07829.1| arginyl-tRNA synthetase [Lactobacillus acidophilus 30SC] gi|327184081|gb|AEA32528.1| arginyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118] Length = 561 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 141/599 (23%), Positives = 255/599 (42%), Gaps = 108/599 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IERP++ G + A IL++ + +P IA+ I + D D S+ G ++N Sbjct: 25 LIERPKNAKMGDYAF-PAFILAKTMHKNPAIIAKDIAENLSSD-DFASIQAVGP-YVNFA 81 Query: 93 LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + L L ++ YG +G+G V I+ S N PM +GH R V+G+++A Sbjct: 82 IDHEKLVSSTLKDVLAEKEHYGDQKLGEGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 M GY + Y+ D G Q L + Y+ + N+ D+ + ++ +V Sbjct: 141 KTMEKVGYTPIKINYLGDYGTQFGKLIAA----YKH--WGNEEDVKKDPIMSLFHYYV-- 192 Query: 212 ELADKYSSELLNFPE-----EKWLPIVKDYSVQA--MMKIIRD----DLK----ALNIQH 256 ++ E + PE +W ++D +A + K R+ D K L + Sbjct: 193 ----RFHKEAEDNPELDDEGREWFKKLEDGDPEAVRLWKWFREVSLKDFKRIYNELGVTF 248 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D + E F+ ++ +ID L +G ++E S+ Q DM Sbjct: 249 DSYNGEAFFN----DKMQPVIDELKEKGLLHE-------SQGAQVVDMGP---------- 287 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV----- 370 D+ ++KSDG+ Y DLA + + E F M+YV+G++ + + L+ V Sbjct: 288 -DENPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQAQHFVELKTVLKKMG 346 Query: 371 ------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412 +S +K + V L ++++ ++ ++ D Sbjct: 347 YDWADEIHHVPFGLITQGGKKLSTRKGNV-VFLDQVLKDAVSLAKKQIQEKNPDLANQDQ 405 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAK 469 V +VG +V F L KN L +FDF V+ + P YVQY AR +S+ R+A Sbjct: 406 VAHDVGVGAVVFHDL--KNDRLDNFDFNLEEVVRFEGDTGP--YVQYTNARAQSVLRKAA 461 Query: 470 DIFPDLDFDLFPRNVIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 + P +++ D + LA++PR++ A+ EP +A Y Sbjct: 462 AMGEK-----------PSDTDLALNDDWAFAVAKDLADFPRIVARASEKFEPSVIAKYSL 510 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 DLA F+ ++++ ++ + +++ RL LV A + ++ L ++GV +P EM Sbjct: 511 DLAKKFNKYYAN------VKILTKDDK--IGARLALVQATSIVLTESLRLLGVNAPKEM 561 >gi|16081423|ref|NP_393761.1| arginyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728] gi|39932237|sp|Q9HLE7|SYR_THEAC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|10639424|emb|CAC11426.1| arginine--tRNA ligase related protein [Thermoplasma acidophilum] Length = 546 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 134/580 (23%), Positives = 250/580 (43%), Gaps = 96/580 (16%) Query: 39 DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY- 97 D H ++ IL P G + + IV I V+ G G+IN+++ +Y Sbjct: 30 DTGHSDITIRVFRILKSPDGGENAVME--IVRSISEKDYVEKALSEG-GYINVWIKRTYM 86 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 LR++L SI SG ++ + +V++E SANPTGP+H+G R +++GD++ +++ Sbjct: 87 LREVLESIEKSGTY--PDVFQEAERVSVEHTSANPTGPLHIGRARNSIIGDSIYRILSRY 144 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL-----KHVGKE 212 GY R+Y++ND+G Q+ +L + + +Y + +L E Y +Y + + KE Sbjct: 145 GYRTVRQYFVNDSGKQMISL-YTAYIKYGGPI--TIENLLEN-YQKIYREMEKDQSIEKE 200 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 + +K N E + + K V M+ I LK + I+ D F E D Sbjct: 201 I-EKNIERYENADPEVFGTLRKIAGV--MLDGIASTLKRIGIEFDEFDWESDLLLN--GS 255 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 +R ID +L + + + ++ K++ L + DG+ Sbjct: 256 VRKAID-----------MLETKEEDSARYIEISGKKVF-------------LTRKDGTTL 291 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 YFA D+AY K E + +I V+G DH + K L V + + + +++ + + L Sbjct: 292 YFARDIAYHLFKAENS-EWIIDVLGEDHKDHAKSLNHVLKEMLKLENRVSFMYYSFITLE 350 Query: 393 RDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFM 425 KMS R G+ +TL+ +VD + S +VR+ Sbjct: 351 TG----KMSTRRGNIVTLQDLVDRTYDEALKIVNEKRPDLSEEERKKIAEVIASSAVRYS 406 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 ++ + + F + + + N ++ Y++AR SI +A + D+ Sbjct: 407 IIRVSAPKPITFRWEEAL-NFESNSAPFIMYSHARAASILDKAPEPEQSYGMDM------ 459 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 P+E E L+ + YP +++A +P +A YL L F+ + R Sbjct: 460 PKE------EADLVKAMYVYPYYLKDAAQDLKPDLIAAYLISLVQKFNDFYGACR----- 508 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V + R+++V A I++ ++IG++ ++M Sbjct: 509 --VIGTDPLTYARRIRIVKAYKQILSDAGDLIGIKMLDQM 546 >gi|293395793|ref|ZP_06640075.1| arginine-tRNA ligase [Serratia odorifera DSM 4582] gi|291421730|gb|EFE94977.1| arginine-tRNA ligase [Serratia odorifera DSM 4582] Length = 576 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 135/587 (22%), Positives = 247/587 (42%), Gaps = 91/587 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE +V + + V IAG GFIN++L+P+++ + Sbjct: 37 GDYQANGVMSVAKKLGMPPRQLAEKVVQLLDLGDIATKVEIAGPGFINIFLTPAWVAQ-H 95 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + + + G + T V I++ + N MHVGH R ++GD A F G++V Sbjct: 96 ADAALRAPKLGIAPVEPQTIV-IDYSAPNVAKEMHVGHVRSTIIGDAAARTQEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND------SDLPEGYYPGVYLKHVGKELADK 216 R ++ D G Q L Y + + N + SDL + Y A K Sbjct: 155 RANHVGDWGTQFGMLI-----AYLEKMQNENASEMGLSDLEQFYRE-----------AKK 198 Query: 217 YSSELLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQH---DIFISEDDFHRG 268 + E F E +VK Y + K++ + + + ++ ++EDD G Sbjct: 199 HYDEDAQFAERARGYVVKLQGGDQYCLGMWRKLVNITMAQNQLVYNRLNVTLTEDDV-MG 257 Query: 269 DP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 + + + I+++L +G E S+ +D + G+ + + Sbjct: 258 ESLYNAMLPGIVEDLKAKGLAVE-------SEGATVVFLDEYK-----NKDGEPMGVIIQ 305 Query: 326 KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEK 377 K DG Y Y D+A K +YE G D ++Y + S + V++ V +VS + Sbjct: 306 KKDGGYLYTTTDIACAKYRYETLGADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVSLE 365 Query: 378 KAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LRHVVDEVG 418 ++L + + + R G IK+S +RA I L VV+ VG Sbjct: 366 HHMFGMMLGKDGKPFKTRSGGTIKLSDLLDEAIERAAKLIAEKNPDMPADELNKVVNAVG 425 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 +V++ L + + FD+ + + N Y+QYAY R S+F++A +D + Sbjct: 426 IGAVKYADLSKSRTTDYIFDWDNML-SFEGNTAPYMQYAYTRVASVFKRA-----GVDEN 479 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 ++ E E+ L L ++ + P+ + YLYD+A +F + H Sbjct: 480 ALTLPLVMTEER----EIALATRLLQFEETLTVVAREGTPHVMCSYLYDVAGLFSSFYEH 535 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + A++ RL+L A + +GL+ +G+++ M Sbjct: 536 ------CQILNADSEAARQSRLKLALLTAKTLKTGLDTLGIDTVERM 576 >gi|239997007|ref|ZP_04717531.1| arginyl-tRNA synthetase [Alteromonas macleodii ATCC 27126] Length = 576 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 145/582 (24%), Positives = 237/582 (40%), Gaps = 80/582 (13%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AM L++ L P IAE IV +K+D + +AG GFIN++L+ +L Sbjct: 36 GEYQFNGAMALAKQLKQKPRDIAEKIVETVKLDDIASKLEVAGPGFINVHLNDEWL---- 91 Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 S+ + R I K + NI ++ S N MHVGH R ++GD + ++ F G+ Sbjct: 92 SNQCELSLTDPRLGIAKSKEQNIVVDYSSPNLAKEMHVGHLRTTIIGDAVVKVLEFLGHN 151 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 V R+ ++ D G Q L + + Q + +L D Y Sbjct: 152 VIRQNHMGDWGTQFGMLLAHLSDKLQDEVAET----------------ALSDLEDFYREA 195 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH---DIFI--SEDDFHRGDPSPIRD 275 + F EE+ D + + ++K+ D + L + D+ I SE+ + + + S R Sbjct: 196 KVRFDEEEGFA---DRAREYVVKLQGGDAQCLALWEKFIDVSIAHSEEVYDKLNVSLTRK 252 Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL----KSDGSY 331 I + ++ K+K D Q++F + D P + KS G Y Sbjct: 253 DIMGESAYNDDLANVISDLKAKGLAVEDQG-AQVVFIPEL-ADKEGNPAVYIVQKSGGGY 310 Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-V 389 Y DLA + + + D + + + + + K+ E V K + C + Sbjct: 311 LYATTDLAAMRYRSGKLNADRTLILTDARQALHFKQTEIVGRKAGFMKEEQTYEHCPFGM 370 Query: 390 RLYRDGMPIKMS---------------KRAGDFIT----------LRHVVDEVGSDSVRF 424 L DG P K +RAG I L+ V +VG +V++ Sbjct: 371 MLGSDGKPFKTRTGGTVKLVELLDEAVERAGKLIAERDNDLSEDELKEVAHKVGIGAVKY 430 Query: 425 MMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 L + + D+ F S E N Y+QYAY R +S+FR+A +D P + Sbjct: 431 ADLSKNRT--TDYMFNWDSMLSFEGNTAPYLQYAYTRVKSLFRKA-----GVDMATMPVD 483 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + E + E L V L ++ VI + P+ L YLYD+AS F + P Sbjct: 484 INIAEKQ----EHALAVLLMQFEEVIGTVSREATPHVLCTYLYDVASAFMSFY---EACP 536 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L+ + RL L VA + GL ++G+E+ +M Sbjct: 537 MLK--DGIEPAVRDSRLALSALVAKTLEQGLTLLGIETLEKM 576 >gi|114045966|ref|YP_736516.1| arginyl-tRNA synthetase [Shewanella sp. MR-7] gi|123131795|sp|Q0HZJ6|SYR_SHESR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|113887408|gb|ABI41459.1| arginyl-tRNA synthetase [Shewanella sp. MR-7] Length = 581 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 146/597 (24%), Positives = 244/597 (40%), Gaps = 86/597 (14%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 RI ++R +D +HG L+TN AM+L++ G +P +A+LI+ + V V IAG GFIN Sbjct: 29 RIQVDRTKDKSHGDLATNLAMMLTKAAGKNPRELAQLIIDNLPASAYVAKVEIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 ++ S L L + +S G L T V +++ S N MHVGH R ++GD++ Sbjct: 89 FFIDDSALANQLQA-AISDEHLGIKLPTPQTIV-VDYSSPNLAKEMHVGHLRSTIIGDSV 146 Query: 151 ASLMAFSGYEVTREYYI--------------------NDAGAQINTLALSVFWRYQQALY 190 + F G++V R+ ++ N AQ+ L F+R + + Sbjct: 147 VRTLEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAQNGEQAQLELSDLETFYRAAKLRF 206 Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA---------- 240 + ++ V G E +K E + + + V Sbjct: 207 DESAEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYERLGVSLTRADVHGESA 266 Query: 241 ----MMKIIRD-DLKALNIQHD----IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291 + ++++D D + L Q + +F E G+ P+ I A GY+Y Sbjct: 267 YNADLEQVVKDLDAQGLLTQSNGAKVVFQEEFRNKEGEALPV---IIQKADGGYLY---- 319 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKYERGFD 350 TT M + + ++ V VD R L ++ A LA F + + + Sbjct: 320 -----ATTDLAAMRYRSSVLKADRVLYFVDLRQALHFQQVFSL--AKLAKF-VRNDMSLE 371 Query: 351 NMIY--VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 ++ + + G D + R V V + + N ELVR M D Sbjct: 372 HLGFGTMNGEDGRPFKTRTGGVVKLV-DLLDEANTRALELVRSKNPDM---------DEA 421 Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 TL + VG +V++ L + + F F ++ + N Y+ YAY R IF++A Sbjct: 422 TLAEIARVVGISAVKYADLSKNRTSDYIFSFEQML-SFEGNTAPYLLYAYTRVAGIFKRA 480 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 DI DL + V+ E E D LA++ ++ +P+ L YLY+L Sbjct: 481 TDI--DLSQ---AKIVLEHEKEKDLGN-----KLAQFGEILSRVVDKGQPHVLCGYLYEL 530 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A F + P L A+N + RL L A+ + GLN++G+E+ M Sbjct: 531 AGAFSSFY---EACPVL---AADNDEQKHSRLLLSQLTANTLQKGLNLLGIETLERM 581 >gi|332140679|ref|YP_004426417.1| arginyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype'] gi|238693246|sp|B4RU34|SYR_ALTMD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|327550701|gb|AEA97419.1| arginyl-tRNA synthetase [Alteromonas macleodii str. 'Deep ecotype'] Length = 576 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 144/582 (24%), Positives = 241/582 (41%), Gaps = 80/582 (13%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AM L++ L P IAE IV +K+D + +AG GFIN++L+ ++L Sbjct: 36 GEYQFNGAMALAKQLKQKPRDIAEKIVETVKLDDIASKLEVAGPGFINVHLNDAWLAN-Q 94 Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + ++ G I K + NI ++ S N MHVGH R ++GD + ++ F G+ Sbjct: 95 CELSLTDPRLG---IAKSPEQNIVVDYSSPNLAKEMHVGHLRTTIIGDAVVKVLEFLGHN 151 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 V R+ ++ D G Q L + + Q+ + +L D Y Sbjct: 152 VIRQNHMGDWGTQFGMLLAHLSDKLQEEVAET----------------ALSDLEDFYREA 195 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH---DIFI--SEDDFHRGDPSPIRD 275 + F EE+ D + + ++K+ D + L + D+ I SE+ + + + S R Sbjct: 196 KVRFDEEEGFA---DRAREYVVKLQGGDAQCLALWEKFIDVSITHSEEVYDKLNVSLTRK 252 Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL----KSDGSY 331 I + ++ K+K D Q++F + D P + KS G Y Sbjct: 253 DIMGESAYNDDLANVISDLKTKGLAVEDQG-AQVVFIPEL-ADKEGNPAVYIVQKSGGGY 310 Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-V 389 Y DLA + + + D + + + + + K+ E V K + C + Sbjct: 311 LYATTDLAAMRYRSGKLNADRTLILTDARQALHFKQTEIVGRKAGFMKEEQTYEHCPFGM 370 Query: 390 RLYRDGMPIKMS---------------KRAGDFIT----------LRHVVDEVGSDSVRF 424 L DG P K +RAG I L+ V +VG +V++ Sbjct: 371 MLGSDGKPFKTRTGGTVKLVELLDEAVERAGKLIAERDNDLSEEELKEVARKVGIGAVKY 430 Query: 425 MMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 L + + D+ F S E N Y+QYAY R +S+FR+A +D P + Sbjct: 431 ADLSKNRT--TDYMFNWDSMLSFEGNTAPYLQYAYTRVKSLFRKA-----GVDMATMPVD 483 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + E + E L V L ++ VI + P+ L YLYD+AS F + P Sbjct: 484 IKLVEKQ----EHALAVLLMQFEEVIGMVSREATPHVLCTYLYDVASAFMTFY---EACP 536 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L+ + ++ RL L VA + GL ++G+E+ +M Sbjct: 537 MLK--EGIEPQVRDSRLALSALVAKTLEKGLTLLGIETLEKM 576 >gi|151942316|gb|EDN60672.1| arginyl-tRNA synthetase [Saccharomyces cerevisiae YJM789] gi|323334169|gb|EGA75553.1| YDR341C-like protein [Saccharomyces cerevisiae AWRI796] Length = 607 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 134/545 (24%), Positives = 226/545 (41%), Gaps = 93/545 (17%) Query: 88 FINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 FI + +P +L K ++ I+ +YG + + KV IEF S N P H GH R ++ Sbjct: 109 FIQFFFNPQFLAKLVIPDILTRKEDYGSCKLVENKKVIIEFSSPNIAKPFHAGHLRSTII 168 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGV 204 G LA+L G+EV R Y+ D G Q LA+ F RY ++AL + P + V Sbjct: 169 GGFLANLYEKLGWEVIRMNYLGDWGKQFGLLAVG-FERYGNEEALVKD----PIHHLFDV 223 Query: 205 YLKHVGKELADKYSS---------------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249 Y++ + K++ ++ S + + +E+ L I K + ++ K I D Sbjct: 224 YVR-INKDIEEEGDSIPLEQSTNGKAREYFKRMEDGDEEALKIWKRFREFSIEKYI-DTY 281 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 LNI++D++ E + + ID +G +E D+ + Sbjct: 282 ARLNIKYDVYSGESQVSK---ESMLKAIDLFKEKGLTHE----------------DKGAV 322 Query: 310 LFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD---HSG-- 362 L T + + ++ KSDG+ Y D+ +YE+ FD MIYV+ S H+ Sbjct: 323 LIDLTKFNKKLGKAIVQKSDGTTLYLTRDVGAAMDRYEKYHFDKMIYVIASQQDLHAAQF 382 Query: 363 ----------YVKRLEAV----AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 + K L+ V +S +K + V L ++ ++ M M K + Sbjct: 383 FEILKQMGFEWAKDLQHVNFGMVQGMSTRKGTV-VFLDNILEETKEKMHEVMKKNENKYA 441 Query: 409 TLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSI 464 + H V D VG +V + K +F + ++ + P Y+QYA++R RS+ Sbjct: 442 QIEHPEEVADLVGISAVMIQDMQGKRINNYEFKWERMLSFEGDTGP--YLQYAHSRLRSV 499 Query: 465 FRQAKDIFPD----LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520 R A I D DF L + + LI L +YP V+ NA EP Sbjct: 500 ERNASGITQDKWINADFSLLK----------EPAAKLLIRLLGQYPDVLRNAIKTHEPTT 549 Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + YL+ L + + +V +L RL L A ++ +G+ ++G+ Sbjct: 550 VVTYLFKLTHQVSSCYD-------VLWVAGQTEELATARLALYGAARQVLYNGMRLLGLT 602 Query: 581 SPNEM 585 M Sbjct: 603 PVERM 607 >gi|262066244|ref|ZP_06025856.1| arginine--tRNA ligase [Fusobacterium periodonticum ATCC 33693] gi|291380057|gb|EFE87575.1| arginine--tRNA ligase [Fusobacterium periodonticum ATCC 33693] Length = 569 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 137/574 (23%), Positives = 251/574 (43%), Gaps = 74/574 (12%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AMI S+ +G +P IAE I A+ V+ + +AG GFIN++L+ Y+ + Sbjct: 39 GDYQCNFAMINSKIIGDNPRKIAEEIKAKFPYGEIVEKLEVAGPGFINIFLTSKYISDSI 98 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 I G Y + + + KV I+F S N MH+GH R ++G+++A +M + GY+V Sbjct: 99 KKI---GEAYDFSFLNRKGKVIIDFSSPNIAKRMHIGHLRSTIIGESVARIMRYLGYDVV 155 Query: 163 REYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221 + +I D G Q L + W ++A N + E VY+K +E S E Sbjct: 156 ADNHIGDWGTQFGKLIVGYRKWLNREAYEKNAIEELE----RVYVK-FSEEAEKDPSLED 210 Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281 L E K + ++ + + + I + LK N ++ D + G+ S D++ ++ Sbjct: 211 LARAELKKVQDGEEENTKLWKEFITESLKEYNKLYERLDVHFDTYYGE-SFYNDMMADVV 269 Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341 ++ + + +K D K LF + K DG+Y Y +D+A Sbjct: 270 KELEEKKLAVDDDGAKVVF---FDEKDNLFPCI---------VQKKDGAYLYSTSDIATV 317 Query: 342 KCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400 K + + + MIY+ + + K+ + + + ++ ++R + DG+ + Sbjct: 318 KFRKDNYDVNKMIYLTDARQQDHFKQFFKITDMLGWDIEKYHIWFG-IIR-FADGI---L 372 Query: 401 SKRAGDFITLRHVVDE---------------------------VGSDSVRFMMLWRKNSE 433 S R G+ I L ++DE VG SV++ L + Sbjct: 373 STRKGNVIKLEELLDEAHSRAYDVVNEKNPNLSEEEKQNIAEVVGVSSVKYADLSQNKQS 432 Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493 + F++ K+ + N Y+ Y YAR +SI R+ + + +L I E++ + Sbjct: 433 DILFEWDKML-SFEGNTAPYLLYTYARIQSILRKV----AEQNIELNDSVEIKIENKIER 487 Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553 S L HL +P + A +P +A YLYDL+ + +++ P L N+ Sbjct: 488 S---LATHLLTFPISVLKAAETFKPNLIADYLYDLSKKLNSFYNNC---PIL------NQ 535 Query: 554 KLTMM--RLQLVHAVASIINSGLNIIGVESPNEM 585 + + R L+ ++ GL+++G+ N+M Sbjct: 536 DIDTLKSRAFLIKKTGEVLKEGLSLLGIPVLNKM 569 >gi|242239601|ref|YP_002987782.1| arginyl-tRNA synthetase [Dickeya dadantii Ech703] gi|242131658|gb|ACS85960.1| arginyl-tRNA synthetase [Dickeya dadantii Ech703] Length = 576 Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 142/603 (23%), Positives = 238/603 (39%), Gaps = 123/603 (20%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE +V +++D IAG GFIN++L +L L Sbjct: 37 GDYQANGIMAVAKKLGMPPRQLAEQVVQLLQLDGIAAKTEIAGPGFINIFLDRQWLSAQL 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 +S + G + T V I++ + N MHVGH R ++GD +AF G++V Sbjct: 97 EH-ALSAPKLGIAGVEPQTIV-IDYSAPNVAKEMHVGHLRSTIIGDAAVRTLAFLGHKVI 154 Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204 R ++ D G Q L L F+R + Y++D+ E G Sbjct: 155 RANHVGDWGTQFGMLIAYLEKVQNEHAGDLELSDLEAFYREAKKHYDDDAAFAE-RARGY 213 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNIQHD 257 +K G D+Y L W +V Q + + +DD+ ++ +D Sbjct: 214 VVKLQG---GDEYCRTL-------WRRLVDITMSQNQRNYDRLNVTLTKDDVMGESLYND 263 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 + P I+ +L +G E S+ ++ FR+ G Sbjct: 264 ML----------PG----IVADLKAKGLAVE-------SEGATVVYLEE----FRNKE-G 297 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI--YVMGSDHS------GYVKRLEA 369 + + + K DG Y Y D+A K +YE N + Y+ H V++ Sbjct: 298 EPMGVIIQKKDGGYLYTTTDIACAKYRYETLNANRVLYYIDSRQHQHLMQAWTIVRKAGY 357 Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------- 416 V AVS + ++L +DG P K RAG I L ++DE Sbjct: 358 VPDAVSLEHHMFGMMLG------KDGKPFK--TRAGGTIKLSELLDEAYDRALALIAEKN 409 Query: 417 --------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462 V +V++ L + + FD+ + + N Y+QYAY R Sbjct: 410 PQMARAELEQLAQVVSVGAVKYADLSKNRTTDYVFDWDNMLA-FEGNTAPYMQYAYTRVA 468 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 SIF++A +D + +I D EL L L ++ I P+ + Sbjct: 469 SIFKRA-----GVDDGSLTQPIILD----DERELALATRLLQFEETITTVAREGTPHVMC 519 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 YLYDLA +F + H + A++ + RL+L A + +GL+ +G+++ Sbjct: 520 AYLYDLAGLFSSFYEH------CPILNADSDSVRQSRLKLAQLTAMTLKTGLDTLGIQTV 573 Query: 583 NEM 585 +M Sbjct: 574 EKM 576 >gi|327479212|gb|AEA82522.1| arginyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166] Length = 579 Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 141/584 (24%), Positives = 242/584 (41%), Gaps = 97/584 (16%) Query: 26 KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85 K + I +E +D +HG ++N AM+L++P G+ P +AE ++A + D V V IAG Sbjct: 24 KGLTPAIQVENTKDKSHGDFASNIAMMLAKPAGMKPRELAEKLIAALPQDAQVSKVEIAG 83 Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 GF+N + + L + L + + + + +V I+ S N MHVGH R + Sbjct: 84 PGFLNFFQNSDALAQRLETALADA-QLAVHKASAKQRVVIDLSSPNLAKEMHVGHLRSTI 142 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205 +GD + ++ F G EV R+ ++ D G Q L L+ A + +DL + Y Sbjct: 143 IGDAVGRVLEFLGDEVIRQNHVGDWGTQFGML-LAYLEEKPAAAESELADLEQFYRAAKQ 201 Query: 206 LKHVGKELADKYSSEL---LNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIF 259 E AD+ + EL L + + L + D S+ KI D L D+ Sbjct: 202 RFDESPEFADR-ARELVVKLQAGDAQCLSLWTRFNDISLSHCQKIY-DRLNVKLTPADV- 258 Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319 E ++ + + DI++ L +G + E Q +D F++ G+ Sbjct: 259 KGESAYN----ADLADIVEALREKGLLTE-------DNGAQCVFLDE----FKNAE-GNP 302 Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378 + + K+ G Y Y DLA + + ++ D ++Y +V + +A+ ++ + Sbjct: 303 LPVIVQKAGGGYLYATTDLAAMRYRSQQLHADRVLY--------FVDQRQALHFQMAFEV 354 Query: 379 AQINVLLCELVRLYR---------DGMPIKMSKRAGDFITLRHVVDE------------- 416 A+ + E ++L DG P K R G + L ++DE Sbjct: 355 ARRAGFVHEGMQLEHMGFGTMNGADGRPFKT--RDGGTVKLIDLLDEAEQRAYALVKGKN 412 Query: 417 --------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462 VG +V++ L + + F+F ++ + N Y+ YAY R Sbjct: 413 PELEEAELRQIARAVGISAVKYADLSKHRTSDYRFNF-ELMLSFEGNTAPYLLYAYTRVA 471 Query: 463 SIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDT-SELQLIVHLAEYPRVIENATIAQEPYK 520 S+FR+ K I + I + D EL L LA++ V+ + EP+ Sbjct: 472 SVFRKLGKGI-----------DEISGHIQLDAEQELALAAKLAQFGEVLNSVGEKGEPHL 520 Query: 521 LAFYLYDLASVFHGHWSH---------GRENPRLRFVQANNRKL 555 L YLYDLA +F + H ++ RLR R L Sbjct: 521 LCAYLYDLAGLFSSFYEHCPILSAEQDAQKQSRLRLAALTGRTL 564 >gi|227876933|ref|ZP_03995029.1| arginyl-tRNA synthetase [Lactobacillus crispatus JV-V01] gi|256850176|ref|ZP_05555606.1| arginyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US] gi|293379845|ref|ZP_06625967.1| arginyl-tRNA synthetase [Lactobacillus crispatus 214-1] gi|295693485|ref|YP_003602095.1| arginyl-tRNA synthetase [Lactobacillus crispatus ST1] gi|227863490|gb|EEJ70913.1| arginyl-tRNA synthetase [Lactobacillus crispatus JV-V01] gi|256713148|gb|EEU28139.1| arginyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US] gi|290923617|gb|EFE00498.1| arginyl-tRNA synthetase [Lactobacillus crispatus 214-1] gi|295031591|emb|CBL51070.1| Arginyl-tRNA synthetase [Lactobacillus crispatus ST1] Length = 561 Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 139/596 (23%), Positives = 253/596 (42%), Gaps = 102/596 (17%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IERP++ G + A IL++ L +P IA+ I + D + ++ G ++N Sbjct: 25 LIERPKNAKMGDYAF-PAFILAKTLHKNPAEIAKNIADNLSSD-NFANIQAVGP-YVNFA 81 Query: 93 LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + L L ++ YG IG+G V I+ S N PM +GH R V+G+++A Sbjct: 82 IDHEKLVSSTLKDVLTEKEHYGDQKIGEGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 M GY + Y+ D G Q L + Y+ + N+ D+ + ++ +V Sbjct: 141 KTMEKVGYTPIKINYLGDYGTQFGKLIAA----YKH--WGNEEDVKKDPIMNLFHYYVKF 194 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAM----------MKIIRDDLKALNIQHDIFIS 261 + + EL N E W ++D +A+ +K + K L + D + Sbjct: 195 HQEAEKNPELDNEGRE-WFKKLEDGDPEAVKLWKWFREVSLKDFKRIYKELGVTFDSYNG 253 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E F+ ++ +ID L +G ++E S+ Q DM + Sbjct: 254 EAFFN----DKMQPVIDELKEKGLLHE-------SRGAQVVDMGEGE------------- 289 Query: 322 RP--LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV-------- 370 P ++KSDG+ Y DLA + + E F M+YV+G++ + + L+ V Sbjct: 290 NPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQAQHFVELKTVLKKMGYDW 349 Query: 371 ---------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 +S +K + V L ++++ ++ ++ D V Sbjct: 350 ADEIHHVPFGLITQGGKKLSTRKGNV-VFLDQVLKDAVSLAKKQIQEKNPDLADQDQVAH 408 Query: 416 EVGSDSVRFMMLWRKNSELLDFDF---CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 +VG +V F L KN L +FDF V+ + P YVQY AR +S+ R+A + Sbjct: 409 DVGVGAVVFHDL--KNDRLDNFDFDLEEVVRFEGDTGP--YVQYTNARAQSVLRKAAAMG 464 Query: 473 PDLDFDLFPRNVIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 + P E++ D + LA++PR++ + EP +A + DLA Sbjct: 465 EN-----------PSETDLALDDDWAFAVAKDLADFPRIVARSAEKFEPSVIAKFALDLA 513 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ ++++ ++ + +++ RL LV A + ++ L ++GV +P EM Sbjct: 514 KKFNKYYAN------VKILTKDDK--IGARLALVQATSIVLTESLRLLGVNAPKEM 561 >gi|146280942|ref|YP_001171095.1| arginyl-tRNA synthetase [Pseudomonas stutzeri A1501] gi|166232826|sp|A4VH02|SYR_PSEU5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|145569147|gb|ABP78253.1| arginyl-tRNA synthetase [Pseudomonas stutzeri A1501] Length = 579 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 139/578 (24%), Positives = 241/578 (41%), Gaps = 97/578 (16%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E +D +HG ++N AM+L++P G+ P +AE ++A + D + V IAG GF+N Sbjct: 30 IQVENTKDKSHGDFASNIAMMLAKPAGMKPRELAEKLIAALPQDAQISKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + L + L + + + + +V I+ S N MHVGH R ++GD + Sbjct: 90 FQNSDALAQRLETALADA-QLAVHKASAKQRVVIDLSSPNLAKEMHVGHLRSTIIGDAVG 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ F G EV R+ ++ D G Q L L+ A + +DL + Y Sbjct: 149 RVLEFLGDEVIRQNHVGDWGTQFGML-LAYLEEKPAAAESELADLEQFYRAAKQRFDESP 207 Query: 212 ELADKYSSEL---LNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 E AD+ + EL L + + L + D S+ KI D L D+ E + Sbjct: 208 EFADR-ARELVVKLQAGDAQCLSLWTRFNDISLSHCQKIY-DRLNVKLTPADV-KGESAY 264 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 + + + DI++ L +G + E Q +D F++ G+ + + Sbjct: 265 N----ADLADIVEALREKGLLTE-------DNGAQCVFLDE----FKNAE-GNPLPVIVQ 308 Query: 326 KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 K+ G Y Y DLA + + ++ D ++Y +V + +A+ ++ + A+ Sbjct: 309 KAGGGYLYATTDLAAMRYRSQQLHADRVLY--------FVDQRQALHFQMAFEVARRAGF 360 Query: 385 LCELVRLYR---------DGMPIKMSKRAGDFITLRHVVDE------------------- 416 + E ++L DG P K R G + L ++DE Sbjct: 361 VHEGMQLEHMGFGTMNGADGRPFKT--RDGGTVKLIDLLDEAEQRAYTLVKGKNPELDEA 418 Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ- 467 VG +V++ L + + F+F ++ + N Y+ YAY R S+FR+ Sbjct: 419 ELRQIARAVGISAVKYADLSKHRTSDYRFNF-ELMLSFEGNTAPYLLYAYTRVASVFRKL 477 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDT-SELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 K I + I + + D EL L LA++ V+ + EP+ L YLY Sbjct: 478 GKGI-----------DEISGQIQLDAEQELALAAKLAQFGEVLNSVGEKGEPHLLCAYLY 526 Query: 527 DLASVFHGHWSH---------GRENPRLRFVQANNRKL 555 DLA +F + H ++ RLR R L Sbjct: 527 DLAGLFSSFYEHCPILGAEQEAQKQSRLRLAALTGRTL 564 >gi|116513886|ref|YP_812792.1| arginyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122275344|sp|Q04B18|SYR_LACDB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|116093201|gb|ABJ58354.1| arginyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 565 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 152/604 (25%), Positives = 258/604 (42%), Gaps = 113/604 (18%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + IERP+D G + L++ + P IA + KID A +IN Sbjct: 25 VKIERPKDEKLGDYAF-PTFTLAKTMRKAPNLIAVELAE--KIDQGSFEKVEAVGPYINF 81 Query: 92 YLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +L S IL I+ YG +G G V E+ S N PM +GH R ++G+ + Sbjct: 82 FLDKSQTGAAILQEILADPENYGARDLGHGRNVLTEYSSPNIAKPMGMGHLRSTMIGEAI 141 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE-------GYYPG 203 A ++A G++ R Y+ D G Q + + ++ ND+D+ + YY Sbjct: 142 ARILAKEGFKPIRIDYLGDWGTQFGKMMAAY------KMWGNDADIEKDPINTLLSYY-- 193 Query: 204 VYLKHVGKELAD------KYSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDDLKALNIQ 255 V + +E + ++ S+L + EE + ++ S++ K+ L++ Sbjct: 194 VRINREAEEHPEYDEDGREWFSKLEHGDEEAKRLWSWFREVSLERFKKV----YDMLDVH 249 Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315 D F E + PI+ + R+ +G+L KS+ + D+++ L Sbjct: 250 FDSFTGEAFSAQMMDKPIQ-----ILRE----KGLLV--KSQGAEIVDLEKYNL------ 292 Query: 316 VGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 PL+ KS+G+ TY DLA Y K Y GF IYV+G + Y ++L A Sbjct: 293 ------PPLMVIKSNGTSTYITRDLATAMYRKKTY--GFYKSIYVVGQEQEVYFQQLRAC 344 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------- 416 + A +++ + +G KMS R G+ + L V++E Sbjct: 345 LKEMGFDWAD-DIVHISFGLMSINGQ--KMSTRKGNVVNLEDVLNESVDLARKQISEKNA 401 Query: 417 -----------VGSDSVRFMML--WRKNSELLDFDFCKV-KEQSKENPVFYVQYAYARCR 462 VG +V F L +R+N +DF+ +V K + + P YVQYA AR Sbjct: 402 GLKNADEVAKQVGIGAVVFHDLKNYRRNP--IDFNLEEVVKFEGETGP--YVQYARARGE 457 Query: 463 SIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 S+ R++ F D D ++ E L+ +A Y I+ A +P + Sbjct: 458 SLLRKSGITDFSDADL-----------TKIGAEEWDLVSFMARYADTIQKAMETYDPSAI 506 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 A Y +LA F+ +++H R V + + RL +V AV+ +I S L+++ V++ Sbjct: 507 AKYALELAKRFNKYYAHTR-----ILVDDVDEDVKKARLAVVQAVSHVIKSALDLLDVKA 561 Query: 582 PNEM 585 P+EM Sbjct: 562 PDEM 565 >gi|68249833|ref|YP_248945.1| arginyl-tRNA synthetase [Haemophilus influenzae 86-028NP] gi|81335742|sp|Q4QL12|SYR_HAEI8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|68058032|gb|AAX88285.1| arginyl-tRNA synthetase [Haemophilus influenzae 86-028NP] Length = 577 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 138/586 (23%), Positives = 243/586 (41%), Gaps = 88/586 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LGL+P A+ ++ +++ + + IAG GFIN++L+P++L + Sbjct: 37 GDYQANGIMAAAKKLGLNPREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 S+ +S G K T V I++ S N MHVGH R ++GD +A + F G+ V Sbjct: 97 SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220 R ++ D G Q L + Q + ++ +L E +Y A K+ E Sbjct: 155 RANHVGDWGTQFGMLI--AYLEKMQNEHASEMELQDLEAFY----------REAKKHYDE 202 Query: 221 LLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNIQH-----DIFISEDDFHRGDP- 270 F E+ +VK D + M K + D N QH ++ ++E D G+ Sbjct: 203 DEIFAEKARNYVVKLQSGDEYCRTMWKRLVDITMQQN-QHNYNRLNVTLTEKDV-MGESL 260 Query: 271 -SP-IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 +P + I+++L +QG E G L + K GD + + K Sbjct: 261 YNPMLPSIVEDLKKQGLAVENDGALVVYLDEFKNKD--------------GDPMGVIVQK 306 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY--------VKRLEAVAAAVSEKK 378 DG + Y D+A K +YE N V ++ V + S + Sbjct: 307 KDGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEH 366 Query: 379 AQINVLLCELVRLY--RDGMPIKMS-------KRAGDFITLRH----------VVDEVGS 419 ++L + + + R G +K++ +RA I ++ V++ +G Sbjct: 367 KNFGMMLGKDGKPFKTRTGGTVKLADLLNEAIERATVLINEKNTNLSNDEKQAVIEAIGI 426 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 SV++ L + + FD+ + + N Y+QYAY R RSIF + D + Sbjct: 427 GSVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNKT-------DINS 478 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 P + D E L + L ++ ++ P+ L YLY+LA +F + H Sbjct: 479 TALLAAPLTIK-DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYELAGIFSSFYEH- 536 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N + + RL+L + GL ++G+++ +M Sbjct: 537 -----CPILNAENESIKLSRLKLALLTEKTLKQGLTLLGIKTVEKM 577 >gi|212697346|ref|ZP_03305474.1| hypothetical protein ANHYDRO_01915 [Anaerococcus hydrogenalis DSM 7454] gi|212675795|gb|EEB35402.1| hypothetical protein ANHYDRO_01915 [Anaerococcus hydrogenalis DSM 7454] Length = 535 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 136/587 (23%), Positives = 236/587 (40%), Gaps = 112/587 (19%) Query: 50 AMILSRPLGLDPLTIA-ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVV 107 A+ + L +P IA EL K D S + ++N Y+ YL+ ++L I+ Sbjct: 10 ALFWQKKLRKNPAIIAKELKEDLEKEDSPYFSKVDSLNAYLNFYIDRKYLQDQVLREIIK 69 Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167 YGR+ +GKG + ++F S N P H+GH R V+GD + ++ F GY YI Sbjct: 70 EKENYGRSDMGKGKNIVLDFSSVNIAKPFHIGHIRSTVIGDAIRNIHDFLGYNTIASNYI 129 Query: 168 NDAGAQINTLA--------------------LSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D G Q + L+++ RY + +ND D+ Sbjct: 130 GDYGTQFGIMIAAYKLWGDDDKLNQNPIKELLNLYVRYNEQA-SNDQDMMNEARDEFRRL 188 Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 G+E A + S W K+ S + ++ K L+I D + E Sbjct: 189 EEGEEEAVRLWS---------WF---KEISFKEFYRV----YKLLDINFDNYHGE----A 228 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---L 324 I D++D L + + E S Q D+ + D P + Sbjct: 229 YQSKYIPDVLDQLEEKNLLTE-------SDGAQIIDLSK-------------YDLPPAII 268 Query: 325 LKSDGSYTYFAADLAY-FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA------------ 371 +KS+GS Y D+A K F +YV+ + + + ++L A+ Sbjct: 269 IKSNGSSAYITRDIATAINRKKTYDFSENLYVVATQQNLHFQQLWAILELMGYDFYKECK 328 Query: 372 -----------AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 +S +K Q+ V L +++ D M R L VG Sbjct: 329 HIPFGMVSLKDQTLSTRKGQV-VFLEDVLNKAIDKTKEIMKDRDSALENLDETAQIVGIG 387 Query: 421 SVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAK-DIFPDLDFD 478 +V+F L+ + FD+ + + + P YVQY+YAR +S+ ++ + D F ++FD Sbjct: 388 AVKFQELYNNRIKDYVFDWDNLLNFEGETGP--YVQYSYARAKSVLKKGQIDNFDKVEFD 445 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L + E LI LAE+ I A EP ++ + D+A F+ ++ Sbjct: 446 LLNTD----------EEFNLIKSLAEFKESIVRAKEKYEPSIISRKVMDIAKNFNKFYNT 495 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + ++ KL RL L +A + +I +GL ++G+++ ++M Sbjct: 496 SK-------IMVDDEKLKEQRLALAYATSIVIKNGLKLLGIKTVDQM 535 >gi|325125547|gb|ADY84877.1| Arginyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 565 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 152/604 (25%), Positives = 258/604 (42%), Gaps = 113/604 (18%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + IERP+D G + L++ + P IA + KID A +IN Sbjct: 25 VKIERPKDEKLGDYAF-PTFTLAKTMRKAPNLIAVELAE--KIDQGSFEKVEAVGPYINF 81 Query: 92 YLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +L S IL I+ YG +G G V E+ S N PM +GH R ++G+ + Sbjct: 82 FLDKSQTGAAILQEILADPENYGARDLGHGRNVLTEYSSPNIAKPMGMGHLRSTMIGEAI 141 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE-------GYYPG 203 A ++A G++ R Y+ D G Q + + ++ ND+D+ + YY Sbjct: 142 ARILAKEGFKPIRIDYLGDWGTQFGKMMAAY------KMWGNDADIEKDPINTLLSYY-- 193 Query: 204 VYLKHVGKELAD------KYSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDDLKALNIQ 255 V + +E + ++ S+L + EE + ++ S++ K+ L++ Sbjct: 194 VRINREAEEHPEYDEDGREWFSKLEHGDEEAKRLWSWFREVSLERFKKV----YDMLDVH 249 Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315 D F E + PI+ + R+ +G+L KS+ + D+++ L Sbjct: 250 FDSFTGEAFSAQMMDKPIQ-----ILRE----KGLLV--KSQGAEIVDLEKYNL------ 292 Query: 316 VGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 PL+ KS+G+ TY DLA Y K Y GF IYV+G + Y ++L A Sbjct: 293 ------PPLMVIKSNGTSTYITRDLATAMYRKKTY--GFYKSIYVVGQEQEVYFQQLRAC 344 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------- 416 + A +++ + +G KMS R G+ + L V++E Sbjct: 345 LKEMGFDWAD-DIVHISFGLMSINGQ--KMSTRKGNVVNLEDVLNESVDLARKQISEKNV 401 Query: 417 -----------VGSDSVRFMML--WRKNSELLDFDFCKV-KEQSKENPVFYVQYAYARCR 462 VG +V F L +R+N +DF+ +V K + + P YVQYA AR Sbjct: 402 GLKNADEVAKQVGIGAVVFHDLKNYRRNP--IDFNLEEVVKFEGETGP--YVQYARARGE 457 Query: 463 SIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 S+ R++ F D D ++ E L+ +A Y I+ A +P + Sbjct: 458 SLLRKSGITDFSDADL-----------TKIGAEEWDLVSFMARYADTIQKAMETYDPSAI 506 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 A Y +LA F+ +++H R V + + RL +V AV+ +I S L+++ V++ Sbjct: 507 AKYALELAKRFNKYYAHTR-----ILVDDVDEDVKKARLAVVQAVSHVIKSALDLLDVKA 561 Query: 582 PNEM 585 P+EM Sbjct: 562 PDEM 565 >gi|300812690|ref|ZP_07093099.1| arginine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300496317|gb|EFK31430.1| arginine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 565 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 150/604 (24%), Positives = 258/604 (42%), Gaps = 113/604 (18%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + IERP+D G + L++ + P IA + KID A +IN Sbjct: 25 VKIERPKDEKLGDYAF-PTFTLAKTMRKAPNLIAAELAE--KIDQGSFEKVEAVGPYINF 81 Query: 92 YLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +L S IL I+ YG +G G V+ E+ S N PM +GH R ++G+ + Sbjct: 82 FLDKSQTGAAILQEILADPENYGARDLGHGRNVSTEYSSPNIAKPMGMGHLRSTMIGEAI 141 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE-------GYYPG 203 A ++A G++ R Y+ D G Q + + ++ ND+D+ + YY Sbjct: 142 ARILAKEGFKPIRIDYLGDWGTQFGKMMAAY------KMWGNDADIEKDPINTLLSYY-- 193 Query: 204 VYLKHVGKELAD------KYSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDDLKALNIQ 255 V + +E + ++ S+L + EE + ++ S++ K+ L++ Sbjct: 194 VRINREAEEHPEYDEDGREWFSKLEHGDEEAKRLWSWFREVSLERFKKV----YDMLDVH 249 Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315 D F E + PI+ + R+ +G+L KS+ + D+++ L Sbjct: 250 FDSFTGEAFSAQMMDEPIQ-----ILRE----KGLLV--KSQGAEIVDLEKYNL------ 292 Query: 316 VGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 PL+ KS+G+ TY DLA Y K Y GF IYV+G + Y ++L A Sbjct: 293 ------PPLMVIKSNGTSTYITRDLATAMYRKKTY--GFYKSIYVVGQEQEVYFQQLRAC 344 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------- 416 + A +++ + +G KMS R G+ + L V++E Sbjct: 345 LKEMGFDWAD-DIVHISFGLMSINGQ--KMSTRKGNVVNLEDVLNESVDLARKQISEKNV 401 Query: 417 -----------VGSDSVRFMML--WRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCR 462 VG +V F L +R+N +DF+ + VK + + P YVQY+ AR Sbjct: 402 GLKNADEVAKQVGIGAVVFHDLKNYRRNP--IDFNLEEVVKFEGETGP--YVQYSRARGE 457 Query: 463 SIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 S+ R++ F D D ++ E L+ + Y I+ A +P + Sbjct: 458 SLLRKSGITDFSDADL-----------TKIGAEEWDLVSFMGRYADTIQKAMETYDPSAI 506 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 A Y +LA F+ +++H R V + + RL +V AV+ +I S L+++ V++ Sbjct: 507 AKYALELAKRFNKYYAHTR-----ILVDDVDEDVKKARLAVVQAVSHVIKSALDLLDVKA 561 Query: 582 PNEM 585 P+EM Sbjct: 562 PDEM 565 >gi|260582207|ref|ZP_05850001.1| arginyl-tRNA synthetase [Haemophilus influenzae NT127] gi|260094839|gb|EEW78733.1| arginyl-tRNA synthetase [Haemophilus influenzae NT127] Length = 577 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 140/592 (23%), Positives = 247/592 (41%), Gaps = 100/592 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LGL+P A+ ++ +++ + + IAG GFIN++L+P++L + Sbjct: 37 GDYQANGIMAAAKKLGLNPREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 S+ +S G K T V I++ S N MHVGH R ++GD +A + F G+ V Sbjct: 97 SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220 R ++ D G Q L + Q + ++ +L E +Y A K+ E Sbjct: 155 RANHVGDWGTQFGMLI--AYLEKMQNEHASEMELQDLEAFY----------REAKKHYDE 202 Query: 221 LLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNIQH-----DIFISEDDFHRGDP- 270 F E+ +VK D +AM K + D N QH ++ ++E D G+ Sbjct: 203 DEVFAEKARNYVVKLQGGDEYCRAMWKRLVDITMQQN-QHNYDRLNVTLTEKDV-MGESL 260 Query: 271 -SPIR-DIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 +P+ I+++L +QG E G L + K GD + + K Sbjct: 261 YNPMLPSIVEDLKKQGLAVENDGALVVYLDEFKNKD--------------GDPMGVIVQK 306 Query: 327 SDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI-NVL 384 DG + Y D+A K +YE D + + S ++++ A ++ K + + Sbjct: 307 KDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQHMQQ----AWLITRKAGYVPDSF 362 Query: 385 LCEL----VRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416 E + L +DG P K R G + L ++DE Sbjct: 363 SLEHKNFGMMLGKDGKPFKT--RTGGTVKLADLLDEAIERATVLINEKNTNLSNDEKQAV 420 Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +V++ L + + FD+ + + N Y+QYAY R RSIF + Sbjct: 421 IEAVGIGAVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNKT----- 474 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 D++ ++ + D E L + L ++ ++ P+ L YLY+LA +F Sbjct: 475 DINSTALLAALLTIK---DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYELAGIFS 531 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + H + A + + + RL+L + GL ++G+++ +M Sbjct: 532 SFYEH------CPILNAEDESIKLSRLKLALLTEKTLKQGLTLLGIKTVEKM 577 >gi|227111621|ref|ZP_03825277.1| arginyl-tRNA synthetase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 576 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 138/606 (22%), Positives = 240/606 (39%), Gaps = 111/606 (18%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 I + G N M +++ LG+ P +AE +V + ++ + IAG GFIN++L Sbjct: 28 IRQSAKAQFGDYQANGVMAVAKKLGMPPRQLAEKVVQLLALEGIAEKTEIAGPGFINIFL 87 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 ++ + + ++ + G + T V I++ + N MHVGH R ++GD A Sbjct: 88 DKQWIASQVEN-ALNAPKLGLTPVEPQTIV-IDYSAPNVAKEMHVGHLRSTIIGDASART 145 Query: 154 MAFSGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSD 195 +AF G+ V R ++ D G Q L L F+R + Y+ D+D Sbjct: 146 LAFLGHNVIRANHVGDWGTQFGMLIAYLEKMQNESASEMDLSDLEAFYREAKKHYDEDAD 205 Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255 E V V + D+Y ++ W +V Q + R L + Sbjct: 206 FAERARAYV----VKLQGGDEYCRQM-------WRKLVDITMTQNQINYER--LNVTLTK 252 Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315 D+ + E ++ P I+ +L +G E S+ +D + Sbjct: 253 QDV-MGESLYNSMLPG----IVADLKAKGLAVE-------SEGATVVFLDEYK-----NK 295 Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRL 367 G+ + + K DG Y Y D+A K +YE D ++Y + S + V++ Sbjct: 296 EGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLNADRVLYYIDSRQHQHLMQAWTIVRKA 355 Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 V +VS + ++L +DG P K RAG I L ++DE +++ ++ Sbjct: 356 GYVPDSVSLEHHMFGMMLG------KDGKPFKT--RAGGTIKLSDLLDEAYDRALK--LI 405 Query: 428 WRKN-----------SELLDFDFCKVKEQSKE-----------------NPVFYVQYAYA 459 KN ++++ K + SK N Y+QYAY Sbjct: 406 AEKNPQMESDELTALAKVVSIGAIKYADLSKSRTTDYVFDWDNMLAFEGNTAPYMQYAYT 465 Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 R SIF++A + D + + D E L L ++ I + P+ Sbjct: 466 RVASIFKRA-----GIQEDSLTQPITLS----DEREFALATRLLQFEETITSVAREGTPH 516 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 + YLYDLA +F G + H + A + + RL+L A + GL+ +G+ Sbjct: 517 VMCSYLYDLAGLFSGFYEH------CPILNAESDDVRQSRLRLALLTAKTLKLGLDTLGI 570 Query: 580 ESPNEM 585 E+ +M Sbjct: 571 ETVEKM 576 >gi|229587962|ref|YP_002870081.1| arginyl-tRNA synthetase [Pseudomonas fluorescens SBW25] gi|259511653|sp|C3KAH3|SYR_PSEFS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|229359828|emb|CAY46678.1| arginyl-tRNA synthetase [Pseudomonas fluorescens SBW25] Length = 578 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 132/575 (22%), Positives = 235/575 (40%), Gaps = 92/575 (16%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+LS+P G+ P +AE I+A + +D V IAG GFIN Sbjct: 30 IQVENTRDKTHGDFASNIAMMLSKPAGMKPRDLAEKIIAALPVDDSVTKAEIAGPGFINF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + L L + + G G + ++ + N MHVGH R ++GD +A Sbjct: 90 FQNTQALAGRLDAALADA-RVGVRKAGPAQRTVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ F G EV R+ ++ D G Q L + + + SDL Y + Sbjct: 149 RVLEFLGDEVVRQNHVGDWGTQFGMLM--AYLQENPITSDELSDLENFYRAAKKRFDESE 206 Query: 212 ELADKYSSEL--LNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 AD+ + L + + L + KD S+ KI +L + + + E ++ Sbjct: 207 AFADRARGLVVKLQAGDAECLALWTKFKDISLSHCQKIY--ELLNVKLTMADVMGESAYN 264 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 + +++++L G + E S Q +D F++ G+ + ++K Sbjct: 265 ----DDLINVVNDLKAAGMLVE-------SNGAQCVFLDE----FKNA-DGEPLPVIIVK 308 Query: 327 SDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383 +DG Y Y DLA +Y G D +Y + + + +++ AVA +KA Sbjct: 309 ADGGYLYATTDLA--AVRYRSGTLKADRALYFVDQRQALHFQQVFAVA-----RKAGFVT 361 Query: 384 LLCELVRL--------------YRDGMPIKM-------SKRAGDFIT----------LRH 412 ++ + RDG +K+ +RA + LR+ Sbjct: 362 HPMDMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLTEAQERAYTLVKEKNPELAEADLRN 421 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 + VG +V++ L + + F+F + + N Y+ YAY R +FR+ F Sbjct: 422 IARVVGIGAVKYADLSKHRTSDYSFNF-DLMLNFEGNTAPYLLYAYTRVAGVFRKLGKDF 480 Query: 473 PDLDFDLFPRNVIPQESEFD---TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 ++ E + D + E +L LA++ V+ + P+ L YLY++A Sbjct: 481 SEV------------EGQIDLQASHEQELAAKLAQFGEVLNSVGEKGTPHILCTYLYEVA 528 Query: 530 SVFHGHWSH---------GRENPRLRFVQANNRKL 555 +F + + ++ RLR R L Sbjct: 529 GLFSSFYENCPILTADDEAQKQSRLRLAALAGRTL 563 >gi|289425965|ref|ZP_06427712.1| arginine--tRNA ligase [Propionibacterium acnes SK187] gi|289153508|gb|EFD02222.1| arginine--tRNA ligase [Propionibacterium acnes SK187] Length = 586 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 138/566 (24%), Positives = 239/566 (42%), Gaps = 63/566 (11%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH +N A+ L++ P +A IVA++ I+ ++ IAG GFINL L L ++ Sbjct: 61 GHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCETPEIAGPGFINLRLRTDVLARVA 120 Query: 103 SSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 S +V +GI K +V I++ + N MHVGH R ++GD +++ G+ Sbjct: 121 SDLVTDPNAGIAQAE----KPERVVIDYSAPNVAKQMHVGHLRSTIIGDCFNRVLSAQGH 176 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 V + +I D G Q L + + + S + + Y + AD+ Sbjct: 177 TVIPQNHIGDWGTQFGMLIEYIVEKRMDVEDFDLSGVEQLYQDSKKTFDADPQFADRARR 236 Query: 220 EL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-- 275 + L + + L I + ++ I + A + + ++++D G+ S D Sbjct: 237 RVVKLQGGDAETLRIWR-----TLIDISLEGFNATYARLSVLLTDEDVA-GESSYNDDLP 290 Query: 276 -IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334 ++D L G E D L + G D + K DG + Y Sbjct: 291 RVVDELVADGLAVE----------------DNGALCV--FVEGQDAPMIVRKRDGGFGYD 332 Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRL 391 A DLA + + + D +IYV S + + L VA A + + +V L Sbjct: 333 ATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAGFLPDDVEAEHVGYGMV-L 391 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML----WRKNSELLDFDFCKVKE--- 444 DG P K R G ++L ++DE + + + L + S L D+ E Sbjct: 392 GPDGRPFKT--REGGTVSLSDLLDEAETHAAPNIALAAIKYADLSNGLQKDYVFDAERMV 449 Query: 445 QSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 Q+ + Y+QYA+AR I R+A ++ P+ D D I E +E QL Sbjct: 450 QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMDWGRISVLDE--PAEQQLA 507 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 + L+ + ++E P+KL YLY+LA + + + P LR + ++ R Sbjct: 508 LLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYE---QCPVLR----STGEVRGSR 560 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L A ++ GL+++G+++P+ M Sbjct: 561 LALCAATRRVLGRGLDLLGIDAPDRM 586 >gi|304384651|ref|ZP_07366997.1| arginine--tRNA ligase [Pediococcus acidilactici DSM 20284] gi|304328845|gb|EFL96065.1| arginine--tRNA ligase [Pediococcus acidilactici DSM 20284] Length = 562 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 140/584 (23%), Positives = 260/584 (44%), Gaps = 81/584 (13%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 IE P++ G L+ L++ L P IA+ +V +I D + V +AG +IN +L Sbjct: 28 IEVPKESKLGDLAF-PTFTLAKVLRKAPQMIAQDLVEKID-QSDFEKVEVAGP-YINFFL 84 Query: 94 SP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 ++ ++L +++ YG N G+ V I+ S N P+ +GH R V+G++LA Sbjct: 85 DKQAFGEEVLRTVLDQKSAYGDNDNGQNGNVPIDMSSPNIAKPISMGHLRSTVIGNSLAL 144 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 +M +GY + ++ D G Q L + L+ ++ D+ + +V Sbjct: 145 IMEKNGYHPIKINHLGDWGTQFGKLITAY------KLWGSEEDVKADPINKLLEYYVRFH 198 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRD-DLKALNIQHDIFISEDDFHRGD 269 DK EL + + W ++D +A + K R+ L++ +D D ++G+ Sbjct: 199 KEDKEKPELDDIARD-WFKKLEDGDEEATNLWKWFREVSLQSFKQIYDKLGITFDSYKGE 257 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KS 327 + D +D + + + E +S+ Q D+++ L P L K+ Sbjct: 258 -AFYNDKMDEIVQ---ILEDKDLLKESRGAQVVDLEKYNL------------NPALIKKT 301 Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---------------- 370 DG+ Y DLA +Y F +YV+G++ + + K+L+AV Sbjct: 302 DGATLYITRDLAAALYRYRTYNFVQSLYVVGAEQTNHFKQLKAVLKEMGYDWSDDIHHIQ 361 Query: 371 -------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 +S + ++ VLL E++ +++++ D V EVG +V Sbjct: 362 FGLITLNGKKLSTRSGRV-VLLDEVLNDAVTLAKKQINEKNPDLANADTVAKEVGVGAVV 420 Query: 424 FMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 F L + + DF+ V+ + + P YVQY+ AR SI R+A D ++ Sbjct: 421 FHDLKNERTNSFDFNLEDVVRFEGETGP--YVQYSRARAESILRKA-------DTEVTTD 471 Query: 483 NV-IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + I + +DT + L E+P V++ A EP +A Y LA F+ ++++ R Sbjct: 472 QLKITDANAWDT-----LKALQEFPSVVQRAAAQYEPSVIAKYALSLAKSFNKYYANSR- 525 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A++ + RL LV +V+ ++ L ++GV++P+EM Sbjct: 526 ------ILADDAE-KPARLALVKSVSLVLEEALRLLGVKAPDEM 562 >gi|42518608|ref|NP_964538.1| arginyl-tRNA synthetase [Lactobacillus johnsonii NCC 533] gi|81668171|sp|Q74KR5|SYR_LACJO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|41582893|gb|AAS08504.1| arginyl-tRNA synthetase [Lactobacillus johnsonii NCC 533] Length = 558 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 147/599 (24%), Positives = 258/599 (43%), Gaps = 109/599 (18%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 ++IERP++ G + A L++ +P IA+ I +I D + S+ G ++N Sbjct: 24 MLIERPKNPKMGDYAF-PAFALAKIEHKNPALIAKDIAEKIS-DDNFTSIQAVGP-YVNF 80 Query: 92 YLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + + L L+ ++ +G +G+G V I+ S N PM +GH R V+G+++ Sbjct: 81 AIDHAKLVNATLNDVLTEKEHFGDQKLGEGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSI 139 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV---YLK 207 A + GY + Y+ D G Q L + +R L+ N+ D+ + + Y+K Sbjct: 140 AKTLEKVGYTPIKINYLGDYGTQFGKLITA--YR----LWGNEGDVKKDPITNLFHYYVK 193 Query: 208 -HVGKELADKYSSE-------LLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNI 254 H E K E L N EE KW ++ S+Q +I K L + Sbjct: 194 FHEEAEKDPKLEDEGRAAFKKLENGDEEEIKLWKWF---REVSLQEFNRI----YKELGV 246 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 D + E F+ ++ ++D L +G + E S+ Q ++ Sbjct: 247 TFDSYNGEAFFN----DKMQPVVDELREKGLLEE-------SRGAQVVNL---------- 285 Query: 315 MVGDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 G+D + L LKSDGS Y DLA Y K +Y+ F +YV G + +G+ K+L+ V Sbjct: 286 --GEDENPALILKSDGSSLYMTRDLAAALYRKKEYD--FVMSLYVAGGEQTGHFKQLKQV 341 Query: 371 -----------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407 +S +K + V L ++++ ++ ++ + Sbjct: 342 LKKMGYDWSDNIHHIPFGLITQGGKKLSTRKGNV-VFLDQVLKDAVSLAEQQIEEKNPNL 400 Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFR 466 + V +VG +V F L + DFD + V+ + P YVQY AR +SI R Sbjct: 401 SNKKQVAHDVGVGAVVFHDLKNDRMDNFDFDLEEVVRFEGDTGP--YVQYTNARAQSILR 458 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 +A ++ D N D + LA++P ++E A+ EP +A Y Sbjct: 459 KAN---KEISMDNLSLN--------DDWSFAVAKALADFPAIVEKASEKFEPSIIAKYAL 507 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 DL+ F+ ++++ +R + +N+ RL LV A + ++ L ++GV +P EM Sbjct: 508 DLSKKFNKYYAN------VRILDEDNQ--LNARLALVQATSIVLTEALRLLGVNAPKEM 558 >gi|302024623|ref|ZP_07249834.1| arginyl-tRNA synthetase [Streptococcus suis 05HAS68] gi|330833730|ref|YP_004402555.1| arginyl-tRNA synthetase [Streptococcus suis ST3] gi|329307953|gb|AEB82369.1| arginyl-tRNA synthetase [Streptococcus suis ST3] Length = 562 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 146/604 (24%), Positives = 253/604 (41%), Gaps = 118/604 (19%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E+P+ G ++ A L++ P IA IV K+D +A ++N + Sbjct: 26 LLEKPKSSEMGDIAF-PAFSLAKVERKAPQAIAADIVE--KLDTTGFEKVVATGPYVNFF 82 Query: 93 LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + + ++L+ ++ +YG+ IG+G V I+ S N P VGH R V+GD LA Sbjct: 83 LDKAAISHQVLTDVITEKDQYGKLNIGQGRNVTIDMSSPNIAKPFSVGHLRSTVIGDALA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY+ R ++ D G Q L ++ W + A+ + P +Y++ + Sbjct: 143 NIHEKLGYKPIRINHLGDWGKQFGMLIVAYKLWGDKAAVEAD----PISELLKLYVR-IN 197 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 E +K L+ +W ++D +A + + RD+ L N +D D + Sbjct: 198 AEAEEKPE---LDDEARQWFKKLEDGDSEAHELWQWFRDESLVEFNRIYDKLDVTFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323 G+ + + I L +G + E SK + D++ L P Sbjct: 255 GEAFYNDKMDEGIQILEEKGLLQE-------SKGARIVDLESYNL-------------PP 294 Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374 ++K+DG+ Y D+A Y K Y+ F IY++G + + K+L+AV + Sbjct: 295 ALIMKTDGATLYITRDMATAMYRKRTYD--FVKSIYIVGQEQINHFKQLKAVLKEMDFDW 352 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 S+ + L +D K+S R G+ I L +DE Sbjct: 353 SDDMTHVTFGLVT-----KDKK--KLSTRKGNIILLEPTLDEAISRALTQIEAKNPDLEN 405 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG +V+F L DFD V + + P YVQYAYAR +SI R+A Sbjct: 406 KEEVAHAVGVGAVKFYDLKTDRDNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKA 463 Query: 469 KDIFPDLDFDLFPRNVIPQ-ESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 N +P E+++ D +I H+ + V+E A +P +A Y Sbjct: 464 --------------NFVPSAENDYKLADAESWDIIKHIQNFSNVVERAGDKFDPSLIAKY 509 Query: 525 LYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 +LA F+ +++H R E+P RL L +A ++ L ++GV++ Sbjct: 510 AINLAQAFNKYYAHTRILDESPERD-----------SRLALAYATGLVLKEALRLLGVKA 558 Query: 582 PNEM 585 P +M Sbjct: 559 PEKM 562 >gi|253989980|ref|YP_003041336.1| arginyl-tRNA synthetase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211639039|emb|CAR67652.1| arginyl-trna synthetase (ec 6.1.1.19) (arginine--trna ligase) (argrs) [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781430|emb|CAQ84593.1| arginyl-tRNA synthetase [Photorhabdus asymbiotica] Length = 576 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 139/587 (23%), Positives = 244/587 (41%), Gaps = 91/587 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ +G+ P +AE +V+ + + V IAG GFIN++L +++ + Sbjct: 37 GDYQANGVMAAAKKVGMPPRQLAEKVVSLLDLQGIASKVEIAGPGFINIFLDKAWIAANV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + + + G + T V +++ + N MHVGH R ++GD + F G++V Sbjct: 97 ET-ALKDEKLGITPVKPQTIV-VDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222 R ++ D G Q L ++ + Q N SD+ +L Y Sbjct: 155 RANHVGDWGTQFGML-IAYLEKVQN---ENASDMAL------------SDLEAFYREAKK 198 Query: 223 NFPEEKWLPI-VKDYSV--QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279 N+ E++ + + Y V Q + R + L I + ++ + R + + RD + Sbjct: 199 NYDEDEEFAVRARSYVVKLQGGDEYCRTMWRKL-IDITMVQNQQTYDRLNVTLTRDSVMG 257 Query: 280 LARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFR---STMVGDDVDRPLLKSDGSYTY 333 + +Y +LP + QK + D +++ G+ + + K DG Y Y Sbjct: 258 ES----LYNDLLPGLVADLKQKGLAVESDGATVVYLDEYKNKEGEPMGVIIQKKDGGYLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLL 385 D+A K +YE D ++Y + S + V++ V +VS + ++L Sbjct: 314 TTTDIACAKYRYETLHADRILYYIDSRQHQHLMQAWTIVRKAGYVPESVSLEHHMFGMML 373 Query: 386 CELVRLYRDGMPIKMS---------------KRAGDFI----------TLRHVVDEVGSD 420 +DG P K +RA I L+ VV+ VG Sbjct: 374 G------KDGKPFKTRAGGTVRLTDLLDEAIERANTLIREKNPDMPKDELKKVVEAVGIG 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +V++ L + + FD+ + + N Y+QYAY R SIF++A +D + Sbjct: 428 AVKYADLSKSRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVTSIFKRA-----GIDENSL 481 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE--PYKLAFYLYDLASVFHGHWSH 538 VI E E L L ++ I T+A+E P+ + YLYDLA +F G + H Sbjct: 482 TLPVILNEER----EQALATRLLQFEETI--TTVAREGTPHVMCAYLYDLAGLFSGFYEH 535 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + A + L RL+L A + GLN +G+E+ M Sbjct: 536 ------CQILNAESEALRQSRLKLALLTAKTLKQGLNTLGIETVERM 576 >gi|73953488|ref|XP_853102.1| PREDICTED: similar to arginyl-tRNA synthetase isoform 1 [Canis familiaris] Length = 660 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 136/584 (23%), Positives = 254/584 (43%), Gaps = 75/584 (12%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S+ L ++P IAE I + + V+ V IAG GFIN++L + Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECVERVEIAGPGFINVHLRKDF 170 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + L++++V+G++ +G+ KV ++F S N MHVGH R ++G+++ L F+ Sbjct: 171 VSQQLTNLLVNGVQLP--ALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFA 228 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215 GY+V R ++ D G Q L + ++ L + DL + +Y + +E Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFK 287 Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SP 272 K + + + + K I+K + + + + R + + DI + E RG+ Sbjct: 288 KRAYQCVVLLQSKNPDIIKAWKL--ICDVSRQEFNKIYDALDISLIE----RGESFYQDR 341 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + D++ +G+V + D D ++++F + G V ++KSDG YT Sbjct: 342 MNDVVKEFEDKGFV--------------QVD-DGRKIVF---VPGCSVPLTIVKSDGGYT 383 Query: 333 YFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV----------------- 374 Y +DLA K + +E D +IYV+ + S + + + A + Sbjct: 384 YDTSDLAALKQRLFEEKADMIIYVVDNGQSVHFQTIFGAAQMIGWYDPKVTRVSHAGFGV 443 Query: 375 --SEKKAQINVLLCELVR---LYRDGMPIKMSK---RAGDFI----TLRHVVDEVGSDSV 422 E K + E VR L +G+ M K + D + L+ V + Sbjct: 444 VLGEDKKKFKTRSGETVRLIDLLEEGLKRSMDKLKEKERDKVLTAEELKAAQTSVAYGCI 503 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 ++ L F F K+ + + N Y+ YA+ R RSI R A +++ ++ + Sbjct: 504 KYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NINEEMLQK 557 Query: 483 NVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + D E +L + +P +++ + L Y+Y+LA+ F + Sbjct: 558 AAQETKIVLDHEKEWKLGRCILRFPEILQKILDDLLLHTLCDYIYELATTFTEFYDSCYC 617 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R K+ M R+ L AVA+I+ +I+G++ M Sbjct: 618 VEKDRQT-GQVLKVNMWRMLLCEAVAAIMAKAFDILGIKPVQRM 660 >gi|117922106|ref|YP_871298.1| arginyl-tRNA synthetase [Shewanella sp. ANA-3] gi|166232843|sp|A0L1H3|SYR_SHESA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|117614438|gb|ABK49892.1| arginyl-tRNA synthetase [Shewanella sp. ANA-3] Length = 581 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 146/597 (24%), Positives = 244/597 (40%), Gaps = 86/597 (14%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 RI ++R +D +HG L+TN AM+L++ G +P +A+LI+ + V V IAG GFIN Sbjct: 29 RIQVDRTKDKSHGDLATNLAMMLTKAAGKNPRELAQLIIDNLPASNYVAKVEIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 ++ S L L + +S G L T V +++ S N MHVGH R ++GD++ Sbjct: 89 FFIDDSALANQLQA-AISDEHLGIKLPTPQTIV-VDYSSPNLAKEMHVGHLRSTIIGDSV 146 Query: 151 ASLMAFSGYEVTREYYI--------------------NDAGAQINTLALSVFWRYQQALY 190 + F G++V R+ ++ N AQ+ L F+R + + Sbjct: 147 VRTLEFLGHKVIRQNHVGDWGTQFGMLLAYMEELRAQNGEQAQLELSDLETFYRAAKLRF 206 Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA---------- 240 + ++ V G E +K E + + + V Sbjct: 207 DESAEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYERLGVSLTRADVHGESA 266 Query: 241 ----MMKIIRD-DLKALNIQHD----IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291 + ++++D D + L Q + +F E G+ P+ I A GY+Y Sbjct: 267 YNADLEQVVKDLDAQGLLTQSNGAKVVFQEEFRNKEGEALPV---IIQKADGGYLY---- 319 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKYERGFD 350 TT M + + ++ V VD R L ++ A LA F + + + Sbjct: 320 -----ATTDLAAMRYRSSVLKADRVLYFVDLRQALHFQQVFSL--AKLAKF-VRNDMSLE 371 Query: 351 NMIY--VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 ++ + + G D + R V V + + N ELVR M D Sbjct: 372 HLGFGTMNGEDGRPFKTRTGGVVKLV-DLLDEANTRALELVRSKNPDM---------DEA 421 Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 TL + VG +V++ L + + F F ++ + N Y+ YAY R IF++A Sbjct: 422 TLAEIARVVGISAVKYADLSKNRTSDYIFSFEQML-SFEGNTAPYLLYAYTRVAGIFKRA 480 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 DI DL + V+ E E D LA++ ++ +P+ L YLY+L Sbjct: 481 TDI--DLSQ---AKIVLEHEKEKDLGN-----KLAQFGEILSRVVDKGQPHVLCGYLYEL 530 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A F + P L A+N + RL L A+ + GLN++G+E+ M Sbjct: 531 AGAFSSFY---EACPVL---AADNDEQKHSRLLLSQLTANTLQKGLNLLGIETLERM 581 >gi|315286577|gb|EFU46012.1| arginyl-tRNA synthetase [Escherichia coli MS 110-3] Length = 543 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 134/537 (24%), Positives = 232/537 (43%), Gaps = 78/537 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G+ N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GNYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G + K T V +++ + N MHVGH R ++GD + F G++V Sbjct: 97 QQALASD-RLGVAMPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + W +Q N +DL EG+Y A K+ Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276 E F E +VK +Q+ + R+ + L DI ++++ + R + + RD Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333 + + + GI+ K+K + + ++F G+ + + K DG Y Y Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389 D+A K +YE D ++Y + S ++ + A+ A V E + + + Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422 L +DG P K RAG + L ++DE VG +V Sbjct: 373 -LGKDGKPFK--TRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-LFP 481 ++ L + + FD+ + + N Y+QYAY R S+FR+A ++D + L Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----EIDEEQLAA 483 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 VI +E E QL L ++ + P+ + YLYDLA +F G + H Sbjct: 484 APVIIREDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH 536 >gi|145592712|ref|YP_001157009.1| arginyl-tRNA synthetase [Salinispora tropica CNB-440] gi|145302049|gb|ABP52631.1| arginyl-tRNA synthetase [Salinispora tropica CNB-440] Length = 572 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 149/603 (24%), Positives = 246/603 (40%), Gaps = 113/603 (18%) Query: 38 RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 R H +AA+ L+R LG P IA ++ ++++ +V ++G GFINL ++ S Sbjct: 28 RRSQHADYQCDAALSLARRLGRRPRDIAAEVLGQVELADLCSAVTVSGPGFINLTVADSA 87 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 L +LS+ + G V +++ + N MHVGH R V+GD L+ + Sbjct: 88 LGTLLST-AAADTRLGIARSAATDTVVVDYSAPNVAKEMHVGHLRSTVIGDAAVRLLEWR 146 Query: 158 GYEVTREYYINDAGAQINTL--------------ALSV-----FWRYQQALYNNDSDLPE 198 G++V + ++ D G L LSV F++ +A ++ D E Sbjct: 147 GHQVIKANHLGDWGTPFGMLIEHLLDLGESEAADELSVGDLDSFYKAARATFDTDDGFRE 206 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 V G EL + +L+ E+ +L + D L L + D Sbjct: 207 RARRRVVALQRGDELTLRLWRQLVAESEKYFLTVY-------------DQLGVLLTEQD- 252 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 F E ++ +P+ D +D L G+L + C +F + G Sbjct: 253 FCGE-SYYNDRLAPVTDELDRL--------GLL---RESGDAAC-------VFPAGFAGR 293 Query: 319 DVDRPL----LKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVA-- 371 D +PL K DG Y Y A DLA + + + G ++YV+G + + + AVA Sbjct: 294 D-GQPLPIIVRKRDGGYGYGATDLAAIRHRTQCLGATRLLYVVGLPQRQHFELVYAVARQ 352 Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------- 416 A A+ L + L DG ++ R GD I L ++DE Sbjct: 353 AGWLRSPARAEHLGFGSI-LGSDGKMLR--SRTGDSIKLVGLLDEAVTRAAELARQKNPD 409 Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 VG ++++ L ++ FD+ ++ N Y+QYA+AR RSI Sbjct: 410 LSATEVADVARAVGIGAIKYADLSTDRNKDYVFDWQRMLSLDG-NTAPYLQYAHARIRSI 468 Query: 465 FRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 FR+A + P P + Q +E L + LA + V+ N + ++LA Sbjct: 469 FRRAEIEQFIP------APITIRHQ------AEHALALELAGFGAVVANVEQTLQFHRLA 516 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 YL+ LA+ F G + P LR A RL L A ++ GL ++G+ +P Sbjct: 517 GYLHTLATTFSGFYE---ACPVLRAEDAVRDS----RLALCDLTARVLRQGLYLLGIATP 569 Query: 583 NEM 585 + M Sbjct: 570 DRM 572 >gi|270290467|ref|ZP_06196692.1| arginyl-tRNA synthetase [Pediococcus acidilactici 7_4] gi|270281248|gb|EFA27081.1| arginyl-tRNA synthetase [Pediococcus acidilactici 7_4] Length = 562 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 140/584 (23%), Positives = 260/584 (44%), Gaps = 81/584 (13%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 IE P++ G L+ L++ L P IA+ +V +I D + V +AG +IN +L Sbjct: 28 IEVPKESKLGDLAF-PTFTLAKVLRKAPQMIAQDLVEKID-QSDFEKVEVAGP-YINFFL 84 Query: 94 SP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 ++ ++L +++ YG N G+ V I+ S N P+ +GH R V+G++LA Sbjct: 85 DKQAFGEEVLRTVLDQKSAYGDNDDGQNGNVPIDMSSPNIAKPISMGHLRSTVIGNSLAL 144 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 +M +GY + ++ D G Q L + L+ ++ D+ + +V Sbjct: 145 IMEKNGYHPIKINHLGDWGTQFGKLITAY------KLWGSEEDVKADPINKLLEYYVRFH 198 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRD-DLKALNIQHDIFISEDDFHRGD 269 DK EL + + W ++D +A + K R+ L++ +D D ++G+ Sbjct: 199 KEDKEKPELDDIARD-WFKKLEDGDEEATNLWKWFREVSLQSFKQIYDKLGITFDSYKGE 257 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KS 327 + D +D + + + E +S+ Q D+++ L P L K+ Sbjct: 258 -AFYNDKMDEIVQ---ILEDKDLLKESRGAQVVDLEKYNL------------NPALIKKT 301 Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---------------- 370 DG+ Y DLA +Y F +YV+G++ + + K+L+AV Sbjct: 302 DGATLYITRDLAAALYRYRTYNFVQSLYVVGAEQTNHFKQLKAVLKEMGYDWSDDIHHIQ 361 Query: 371 -------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 +S + ++ VLL E++ +++++ D V EVG +V Sbjct: 362 FGLITLNGKKLSTRSGRV-VLLDEVLNDAVTLAKKQINEKNPDLANADTVAKEVGVGAVV 420 Query: 424 FMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 F L + + DF+ V+ + + P YVQY+ AR SI R+A D ++ Sbjct: 421 FHDLKNERTNSFDFNLEDVVRFEGETGP--YVQYSRARAESILRKA-------DTEVTTD 471 Query: 483 NV-IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + I + +DT + L E+P V++ A EP +A Y LA F+ ++++ R Sbjct: 472 QLKITDANAWDT-----LKALQEFPSVVQRAAAQYEPSVIAKYALSLAKSFNKYYANSR- 525 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A++ + RL LV +V+ ++ L ++GV++P+EM Sbjct: 526 ------ILADDAE-KPARLALVKSVSLVLEEALRLLGVKAPDEM 562 >gi|237739425|ref|ZP_04569906.1| arginyl-tRNA synthetase [Fusobacterium sp. 2_1_31] gi|229423033|gb|EEO38080.1| arginyl-tRNA synthetase [Fusobacterium sp. 2_1_31] Length = 569 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 137/578 (23%), Positives = 250/578 (43%), Gaps = 82/578 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AMI S+ +G +P IAE I A+ V+ + +AG GFIN++L+ Y I Sbjct: 39 GDYQCNFAMINSKIIGDNPRKIAEEIKAKFPYGEIVEKLEVAGPGFINIFLTDKY---IS 95 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 SI G Y + + + KV I+F S N MH+GH R ++G+++A +M + GY+V Sbjct: 96 DSIKKIGEAYDFSFLNRKGKVIIDFSSPNIAKRMHIGHLRSTIIGESIARIMRYLGYDVV 155 Query: 163 REYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVGKE--LADKYSS 219 + +I D G Q L + W ++A N + E Y + + K+ L D + Sbjct: 156 ADNHIGDWGTQFGKLIVGYRKWLNREAYEKNAIEELERVYVK-FSEEAEKDPSLEDLARA 214 Query: 220 EL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277 EL + EE+ + K++ ++ +K K L++ D + E ++ + D++ Sbjct: 215 ELKKVQDGEEENTKLWKEFITES-LKEYNKLYKRLDVHFDTYYGESFYN----DMMADVV 269 Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337 L + + + D K LF + K DG+Y Y +D Sbjct: 270 KELEEKKLAVD-------DDGAKVVFFDEKDNLFPCI---------VQKKDGAYLYSTSD 313 Query: 338 LAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396 +A K + + + MIY+ + + K+ + + + ++ ++R + DG+ Sbjct: 314 IATVKFRKDNYDVNKMIYLTDARQQDHFKQFFKITDMLGWDIEKYHIWFG-IIR-FADGI 371 Query: 397 PIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMMLWR 429 +S R G+ I L ++DE VG SV++ L + Sbjct: 372 ---LSTRKGNVIKLEELLDEAHSRAYDVVNEKNPNLSEEEKQNIAEVVGVSSVKYADLSQ 428 Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489 + F++ K+ + N Y+ Y YAR +SI R+ + + +L I E+ Sbjct: 429 NKQSDILFEWDKML-SFEGNTAPYLLYTYARIQSILRK----IDEQNIELNDSVEIKIEN 483 Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549 + + S L HL +P + A +P +A YLYDL+ + +++ P L Sbjct: 484 KIERS---LATHLLTFPISVLKAAETFKPNLIADYLYDLSKKLNSFYNNC---PIL---- 533 Query: 550 ANNRKLTMM--RLQLVHAVASIINSGLNIIGVESPNEM 585 N+ + + R L+ ++ GL+++G+ N+M Sbjct: 534 --NQDIDTLKSRALLIKKTGEVLKEGLSLLGIPVLNKM 569 >gi|192359863|ref|YP_001982872.1| arginyl-tRNA synthetase [Cellvibrio japonicus Ueda107] gi|238692459|sp|B3PKE3|SYR_CELJU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|190686028|gb|ACE83706.1| arginyl-tRNA synthetase [Cellvibrio japonicus Ueda107] Length = 579 Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 137/611 (22%), Positives = 248/611 (40%), Gaps = 116/611 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +I + G N AM ++ +G +P +A IVA + ++ D + IAG GFIN+Y Sbjct: 27 LIAPGKKAGFGDYQANGAMGAAKAMGTNPRDLAGKIVAALDLEGIADKLEIAGPGFINIY 86 Query: 93 LSPSYLRKILS------SIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 L P++L K ++ + V E+ + ++ I++ N MHVGH R ++ Sbjct: 87 LKPAWLGKQIALAQTDARLAVPQAEHAQTVV-------IDYSGPNLAKEMHVGHLRSTII 139 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP----EGYYP 202 GD+LA L+ F G++V R+ ++ D G Q L + +Q D+ L E +Y Sbjct: 140 GDSLARLLEFLGHQVIRQNHVGDWGTQFGMLIAEL---EEQLGAKGDAALELKDLEVFY- 195 Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH------ 256 + A K+ + F ++ +V+ A M + K +++ H Sbjct: 196 ---------QQAKKHFDDDAAFADKARDYVVRLQGGDAQMLKLWQQFKDISLHHSSEIYQ 246 Query: 257 -------DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 D + + F+ D +P ++ L QG E + Q+ Sbjct: 247 QLNVTLTDADVRGESFYNDDLAP---LVKALQDQGLAVES---------------EGAQV 288 Query: 310 LFRSTMVGDDVD-RPLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVK 365 +F + D + P++ K G + Y DLA + + ++Y + + S +++ Sbjct: 289 VFLPELADKDGNPSPVIIQKQGGGFLYATTDLAALRYRVNTLNAKRIMYFIDARQSLHMQ 348 Query: 366 RLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 ++ + A VS+ + ++ + + DG P K R G + L ++ E + Sbjct: 349 QVFTISRKAGFVSDAVSLEHLAFGTM--MGSDGKPFK--TRTGGTVKLAELLSEAVDRAA 404 Query: 423 RFMMLWRKNSELLD-----------------FDFCKVKEQS-----------KENPVFYV 454 ++ KN EL D CK + + N Y+ Sbjct: 405 S--VVSEKNPELAGEDIAEIARKVGIGAVKYADLCKTRTNDYVFSWESMLSFEGNTAPYL 462 Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514 QYAY R +SIFR+A + P + E L + L ++ V++ Sbjct: 463 QYAYTRVQSIFRKA---------GVAPETLGSPILLGSEQEKALAIKLLQFSEVLDQMAR 513 Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 P+ L YLYD+AS++ + P L+ + + ++ RL+L H VA I GL Sbjct: 514 EAMPHLLCTYLYDIASLYMSFY---EACPILK--EGVDAEVRDSRLRLCHLVARTIAQGL 568 Query: 575 NIIGVESPNEM 585 ++G+E M Sbjct: 569 GLLGIEVMERM 579 >gi|295425349|ref|ZP_06818052.1| arginine--tRNA ligase [Lactobacillus amylolyticus DSM 11664] gi|295065125|gb|EFG56030.1| arginine--tRNA ligase [Lactobacillus amylolyticus DSM 11664] Length = 561 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 143/597 (23%), Positives = 256/597 (42%), Gaps = 104/597 (17%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IERP++ G + IL++ + +P IA+ I + + + S+ G ++N Sbjct: 25 LIERPKNAKMGDYAF-PCFILAKTMHKNPAEIAKSIAENLSSE-NFASIQAVGP-YVNFS 81 Query: 93 LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + L L ++ G YG +GKG V I+ S N PM +GH R V+G+++A Sbjct: 82 IDHGKLISSTLKDVLDKGEHYGDQELGKGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 + M GY + Y+ D G Q L + Y+ + N+ D+ + ++ +V Sbjct: 141 NTMEKVGYTPIKINYLGDYGTQFGKLIAA----YKH--WGNEEDVKKDPIMNLFHYYV-- 192 Query: 212 ELADKYSSELLNFPE-----EKWLPIVKDYSVQA--MMKIIRD----DLK----ALNIQH 256 ++ E PE +W ++D +A + K R+ D K L + Sbjct: 193 ----RFHKEAEKNPELDDEGREWFKKLEDGDPEAVKLWKWFREVSLKDFKRIYNELGVTF 248 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D + E F+ ++ +ID L +G ++E S+ Q DM Sbjct: 249 DSYNGEAFFN----DKMQPVIDELRDKGLLHE-------SRGAQVVDMGP---------- 287 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV----- 370 D+ ++KSDG+ Y DLA + + + F M+YV+G++ + + L+ V Sbjct: 288 -DENPAIIVKSDGTSIYLTRDLAAAEWRMKHYNFVKMLYVVGNEQAQHFVELKTVLKKMG 346 Query: 371 ------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412 +S +K + V L ++++ ++ ++ D Sbjct: 347 YDWADDIHHVSFGLITQGGKKLSTRKGNV-VFLDQVLKDAVSLAKKQIQEKNPDLANQDQ 405 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAK 469 V +VG +V F L KN L +FDF V+ + P YVQY AR +S+ R+A Sbjct: 406 VAHDVGVGAVVFHDL--KNDRLDNFDFNLEEVVRFEGDTGP--YVQYTNARAQSVLRKAS 461 Query: 470 DIFPD-LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 + D DL + E F ++ LA++PR+I + EP +A Y DL Sbjct: 462 KVGKKPADNDL----ALDDEWSFAVAK-----DLADFPRIIARSADKFEPSVIAKYALDL 512 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A F+ ++++ ++ + +N+ RL LV A + ++ L ++GV +P EM Sbjct: 513 AKKFNKYYAN------VKILTDDNQ--IGARLALVQATSIVLTEALRLLGVNAPKEM 561 >gi|261340259|ref|ZP_05968117.1| arginine--tRNA ligase [Enterobacter cancerogenus ATCC 35316] gi|288317347|gb|EFC56285.1| arginine--tRNA ligase [Enterobacter cancerogenus ATCC 35316] Length = 577 Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 134/590 (22%), Positives = 242/590 (41%), Gaps = 96/590 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + + IAG GFIN++L P++ L Sbjct: 37 GDYQANGVMAVAKKLGMPPRQLAEQVLTHLDLTGIASKTEIAGPGFINIFLEPAF----L 92 Query: 103 SSIVVSGIEYGRNLIGK--GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 +S V + ++ R + + + I++ + N MHVGH R ++GD F G++ Sbjct: 93 ASHVDAALKSDRLGVSQPEPQTIVIDYSAPNVAKEMHVGHLRSTIIGDAAVRTNEFLGHK 152 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 V R ++ D G Q L ++ + QQ N ++ G Y + A K+ E Sbjct: 153 VIRANHVGDWGTQFGML-IAYLEKQQQ---ENAGEMALADLEGFYRE------AKKHYDE 202 Query: 221 LLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPI 273 F E +VK Y ++ K++ DI +S++ ++R + + Sbjct: 203 DEAFAERARSYVVKLQGGDQYFLEMWRKLV-----------DITMSQNQLTYNRLNVTLT 251 Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF---RSTMVGDDVDRPLLKSDGS 330 RD + + + GI+ K+K + + ++F G+ + + K DG Sbjct: 252 RDDVMGESLYNPMLPGIVADLKAKNL-AVESEGATVVFLDEYKNKEGEPMGVIIQKKDGG 310 Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382 Y Y D+A K +YE D ++Y + S + V++ V +V + Sbjct: 311 YLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAGYVPDSVPLEHHMFG 370 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416 ++L +DG P K RAG + L ++DE Sbjct: 371 MMLG------KDGKPFK--TRAGGTVKLSDLLDEALERARRLVAEKNPDMPADELEKLAN 422 Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 VG +V++ L + + FD+ + + N Y+QYAY R S+FR+A ++ Sbjct: 423 AVGIGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----NI 476 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 D + + + E QL L ++ + P+ + YLYDLA +F G Sbjct: 477 DESALANATV---TITEDREAQLAARLLQFEETLAVVARDGTPHVMCSYLYDLAGLFSGF 533 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + H + A + + RL+L A + GL+ +G+E+ M Sbjct: 534 YEH------CPILSAESDSVRSSRLKLAQLTAKTLKLGLDTLGIETVERM 577 >gi|227329329|ref|ZP_03833353.1| arginyl-tRNA synthetase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 576 Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 139/612 (22%), Positives = 236/612 (38%), Gaps = 123/612 (20%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 I + G N M +++ LG+ P +AE +V + ++ + IAG GFIN++L Sbjct: 28 IRQSAKAQFGDYQANGVMAVAKKLGMPPRQLAEKVVQLLALEGIAEKTEIAGPGFINIFL 87 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKG------TKVNIEFVSANPTGPMHVGHCRCAVVG 147 + V S +E N G + I++ + N MHVGH R ++G Sbjct: 88 DKQW--------VASQVENALNAPKLGLTPVEPQTIVIDYSAPNVAKEMHVGHLRSTIIG 139 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQAL 189 D A + F G+ V R ++ D G Q L L F+R + Sbjct: 140 DASARTLEFLGHNVIRANHVGDWGTQFGMLIAYLEKMQNESASEMDLSDLEAFYREAKKH 199 Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249 Y+ D+D E V V + D+Y ++ W +V Q + R L Sbjct: 200 YDEDADFAERARAYV----VKLQGGDEYCRQM-------WRKLVDITMTQNQINYER--L 246 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 + D+ + E ++ P I+ +L +G E S+ +D + Sbjct: 247 NVTLTKQDV-MGESLYNSMLPG----IVADLKAKGLAVE-------SEGATVVFLDEYK- 293 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY----- 363 G+ + + K DG Y Y D+A K +YE D ++Y + S + Sbjct: 294 ----NKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLNADRVLYYIDSRQHQHLMQAW 349 Query: 364 --VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 V++ V +VS + ++L +DG P K RAG I L ++DE + Sbjct: 350 TIVRKAGYVPDSVSLEHHMFGMMLG------KDGKPFKT--RAGGTIKLSELLDEAYDRA 401 Query: 422 VRFMMLWRKN-----------SELLDFDFCKVKEQSKE-----------------NPVFY 453 ++ ++ KN ++++ K + SK N Y Sbjct: 402 LK--LIAEKNPQMESDELTALAKVVSIGAIKYADLSKSRTTDYVFDWDNMLAFEGNTAPY 459 Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513 +QYAY R SIF++A + D + + D E L L ++ I + Sbjct: 460 MQYAYTRVASIFKRA-----GIQEDSLTQPITLN----DEREFALATRLLQFEETITSVA 510 Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573 P+ + YLYDLA +F G + H + A + + RL+L A + G Sbjct: 511 REGTPHVMCSYLYDLAGLFSGFYEH------CPILNAESDDVRQSRLRLALLTAKTLKQG 564 Query: 574 LNIIGVESPNEM 585 L+ +G+E+ +M Sbjct: 565 LDTLGIETVEKM 576 >gi|238855154|ref|ZP_04645476.1| arginine--tRNA ligase [Lactobacillus jensenii 269-3] gi|260665531|ref|ZP_05866377.1| arginyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US] gi|282932567|ref|ZP_06337989.1| arginine--tRNA ligase [Lactobacillus jensenii 208-1] gi|313473147|ref|ZP_07813631.1| arginine--tRNA ligase [Lactobacillus jensenii 1153] gi|238832235|gb|EEQ24550.1| arginine--tRNA ligase [Lactobacillus jensenii 269-3] gi|239528608|gb|EEQ67609.1| arginine--tRNA ligase [Lactobacillus jensenii 1153] gi|260560652|gb|EEX26630.1| arginyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US] gi|281303315|gb|EFA95495.1| arginine--tRNA ligase [Lactobacillus jensenii 208-1] Length = 558 Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 154/616 (25%), Positives = 265/616 (43%), Gaps = 116/616 (18%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD 77 I ++++ K+ ++ + IERP++ G + A IL++ L +P IA+ IVA + D + Sbjct: 11 ISSQVELPKEKINSL-IERPKNPEMGDYAF-PAFILAKTLHKNPAEIAKDIVANL-ADDN 67 Query: 78 VDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 + + G ++N + S L + L ++V YG +G G V I+ S N PM Sbjct: 68 FEKIQAVGP-YVNFSIKKSALISQTLEEVLVKKNNYGNQNLGSGN-VAIDMSSPNIAKPM 125 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 +GH R V+G+++A ++ GY + ++ D G Q L + L+ N+ D+ Sbjct: 126 SMGHLRSTVIGNSIAKILTKVGYTPIKINHLGDYGTQFGKLITAY------KLWGNEEDV 179 Query: 197 PEG-------YYPGVYLKHVGKE---LADKYSSELLNF----PEE-KWLPIVKDYSVQAM 241 + YY V V +E L D+ + PE K + S+Q Sbjct: 180 KKDPINSLFHYY--VKFHEVAEEKPELEDEGRAWFKKLEGGDPEAVKLWNWFRKVSLQEF 237 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 +I K LN++ D + E ++ + I+D L ++ + E S+ Q Sbjct: 238 NRI----YKKLNVEFDSYHGEAFYN----DKMDVIVDELRQKDLLVE-------SRGAQV 282 Query: 302 CDMDRKQLLFRSTMVGDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMG 357 D+ G D + + LKSDG+ Y DL Y K Y+ F +YV+G Sbjct: 283 VDL------------GPDKNPAMILKSDGTSIYTTRDLTAAEYRKKHYD--FVQALYVVG 328 Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL------- 410 ++ S Y ++L+ V + A ++ + + G K+S R G+ + L Sbjct: 329 NEQSAYFEQLKEVLKKMGHNWAD-DIHHIPFGLITQGGK--KLSTRKGNVVFLDKVLEDA 385 Query: 411 ------------------RHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKEN 449 V +EVG +V F L KN L FDF V+ + + Sbjct: 386 VELAMKQIETKNPGLPNKEQVANEVGIGAVVFHDL--KNDRLDAFDFNLEEVVRFEGETG 443 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 P YVQY AR +SI R+A I + DL D + LA++P V+ Sbjct: 444 P--YVQYTNARAQSILRKANQIVTIDELDL-----------SDEWAFAVAKDLADFPAVL 490 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 A+ EP +A + LA F+ ++++ +R + +++ RL LV A + + Sbjct: 491 AKASEKYEPSIIAKFALKLAKHFNKYYAN------VRILDEDDQ--LAARLALVKATSIV 542 Query: 570 INSGLNIIGVESPNEM 585 + L+++GV +P EM Sbjct: 543 LTESLHLLGVAAPKEM 558 >gi|313763775|gb|EFS35139.1| arginyl-tRNA synthetase [Propionibacterium acnes HL013PA1] gi|313793676|gb|EFS41707.1| arginyl-tRNA synthetase [Propionibacterium acnes HL110PA1] gi|313802987|gb|EFS44195.1| arginyl-tRNA synthetase [Propionibacterium acnes HL110PA2] gi|313810614|gb|EFS48328.1| arginyl-tRNA synthetase [Propionibacterium acnes HL083PA1] gi|313813755|gb|EFS51469.1| arginyl-tRNA synthetase [Propionibacterium acnes HL025PA1] gi|313816906|gb|EFS54620.1| arginyl-tRNA synthetase [Propionibacterium acnes HL059PA1] gi|313829707|gb|EFS67421.1| arginyl-tRNA synthetase [Propionibacterium acnes HL063PA2] gi|313839384|gb|EFS77098.1| arginyl-tRNA synthetase [Propionibacterium acnes HL086PA1] gi|314916670|gb|EFS80501.1| arginyl-tRNA synthetase [Propionibacterium acnes HL005PA4] gi|314918872|gb|EFS82703.1| arginyl-tRNA synthetase [Propionibacterium acnes HL050PA1] gi|314920883|gb|EFS84714.1| arginyl-tRNA synthetase [Propionibacterium acnes HL050PA3] gi|314932325|gb|EFS96156.1| arginyl-tRNA synthetase [Propionibacterium acnes HL067PA1] gi|314956601|gb|EFT00853.1| arginyl-tRNA synthetase [Propionibacterium acnes HL027PA1] gi|314959481|gb|EFT03583.1| arginyl-tRNA synthetase [Propionibacterium acnes HL002PA1] gi|314964676|gb|EFT08776.1| arginyl-tRNA synthetase [Propionibacterium acnes HL082PA1] gi|314968918|gb|EFT13016.1| arginyl-tRNA synthetase [Propionibacterium acnes HL037PA1] gi|315079335|gb|EFT51336.1| arginyl-tRNA synthetase [Propionibacterium acnes HL053PA2] gi|315082371|gb|EFT54347.1| arginyl-tRNA synthetase [Propionibacterium acnes HL078PA1] gi|315100250|gb|EFT72226.1| arginyl-tRNA synthetase [Propionibacterium acnes HL059PA2] gi|315102574|gb|EFT74550.1| arginyl-tRNA synthetase [Propionibacterium acnes HL046PA1] gi|315109666|gb|EFT81642.1| arginyl-tRNA synthetase [Propionibacterium acnes HL030PA2] gi|327455900|gb|EGF02555.1| arginyl-tRNA synthetase [Propionibacterium acnes HL087PA3] gi|327456007|gb|EGF02662.1| arginyl-tRNA synthetase [Propionibacterium acnes HL092PA1] gi|327458052|gb|EGF04707.1| arginyl-tRNA synthetase [Propionibacterium acnes HL083PA2] gi|328757213|gb|EGF70829.1| arginyl-tRNA synthetase [Propionibacterium acnes HL087PA1] gi|328757596|gb|EGF71212.1| arginyl-tRNA synthetase [Propionibacterium acnes HL025PA2] Length = 582 Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 138/566 (24%), Positives = 239/566 (42%), Gaps = 63/566 (11%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH +N A+ L++ P +A IVA++ I+ ++ IAG GFINL L L ++ Sbjct: 57 GHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCETPEIAGPGFINLRLRTDVLARVA 116 Query: 103 SSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 S +V +GI K +V I++ + N MHVGH R ++GD +++ G+ Sbjct: 117 SDLVTDPNAGIAQAE----KPERVVIDYSAPNVAKQMHVGHLRSTIIGDCFNRVLSAQGH 172 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 V + +I D G Q L + + + S + + Y + AD+ Sbjct: 173 TVIPQNHIGDWGTQFGMLIEYIVEKRMDVEDFDLSGVEQLYQDSKKTFDADPQFADRARR 232 Query: 220 EL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-- 275 + L + + L I + ++ I + A + + ++++D G+ S D Sbjct: 233 RVVKLQGGDAETLRIWR-----TLIDISLEGFNATYARLSVLLTDEDVA-GESSYNDDLP 286 Query: 276 -IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334 ++D L G E D L + G D + K DG + Y Sbjct: 287 RVVDELVADGLAVE----------------DNGALCV--FVEGQDAPMIVRKRDGGFGYD 328 Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRL 391 A DLA + + + D +IYV S + + L VA A + + +V L Sbjct: 329 ATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAGFLPDDVEAEHVGYGMV-L 387 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML----WRKNSELLDFDFCKVKE--- 444 DG P K R G ++L ++DE + + + L + S L D+ E Sbjct: 388 GPDGRPFKT--REGGTVSLSDLLDEAETHAAPNIALAAIKYADLSNGLQKDYVFDAERMV 445 Query: 445 QSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 Q+ + Y+QYA+AR I R+A ++ P+ D D I E +E QL Sbjct: 446 QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMDWGRISVLDE--PAEQQLA 503 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 + L+ + ++E P+KL YLY+LA + + + P LR + ++ R Sbjct: 504 LLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYE---QCPVLR----STGEVRGSR 556 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L A ++ GL+++G+++P+ M Sbjct: 557 LALCAATRRVLGRGLDLLGIDAPDRM 582 >gi|167468376|ref|ZP_02333080.1| arginyl-tRNA synthetase [Yersinia pestis FV-1] Length = 532 Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 134/586 (22%), Positives = 235/586 (40%), Gaps = 105/586 (17%) Query: 51 MILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI 110 M +++ LG+ P +AE +V + + + IAG GFIN++L + V + Sbjct: 1 MAVAKKLGMQPRQLAERVVELLDLTGIASKIEIAGPGFINIFLDRQW--------VAEKV 52 Query: 111 EYGRNLIGKGT------KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164 EY G + +++ + N MHVGH R ++GD +AF G+ V R Sbjct: 53 EYALTAPKLGVAPVEPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRA 112 Query: 165 YYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGVYL 206 ++ D G Q L L +F YQQA D D Y+ Sbjct: 113 NHVGDWGTQFGMLIAYLEKMQNENASDMGLSDLELF--YQQAKKTYDEDEEFALRARAYV 170 Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 V + D+Y ++ W +V A ++ D L + + D + E ++ Sbjct: 171 --VKLQSGDEYCRQM-------WRKLVD--ITMAQNQVAYDRLN-VTLTKDDVMGESLYN 218 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 P +I+ +L +G E + T D + + G+ + + K Sbjct: 219 AMLP----EIVADLKAKGLAVE-----SEGATVVYLDEYKNK-------DGEPMGVIIQK 262 Query: 327 SDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKK 378 DG Y Y D+A K +YE G D ++Y + S + V++ V +V + Sbjct: 263 KDGGYLYTTTDIACAKYRYETLGADRILYYIDSRQHQHLMQAWTIVRKAGYVPESVPLEH 322 Query: 379 AQINVLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LRHVVDEVGS 419 ++L + + + R G +K+S +RAG I L+ V++ VG Sbjct: 323 HMFGMMLGKDGKPFKTRSGGTVKLSDLLDEAVERAGKLIAEKNPDMPADELKQVINAVGI 382 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 +V++ L + + FD+ + N Y+QYAY R S+FR+A L L Sbjct: 383 GAVKYADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSVFRRAGVDETSLTLPL 441 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 V+ ++ E L L ++ +I P+ + YLYDLA +F + H Sbjct: 442 ----VVTEDRE-----ATLATRLLQFEEIITTVAREGTPHVMCSYLYDLAGLFSSFYEH- 491 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + A + ++ RL+L A + GL+ +G+++ M Sbjct: 492 -----CQILNAESEEIRQSRLKLAMLTAKTLKQGLDTLGIQTVERM 532 >gi|289427907|ref|ZP_06429611.1| arginine--tRNA ligase [Propionibacterium acnes J165] gi|289158790|gb|EFD06990.1| arginine--tRNA ligase [Propionibacterium acnes J165] Length = 586 Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 138/566 (24%), Positives = 239/566 (42%), Gaps = 63/566 (11%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH +N A+ L++ P +A IVA++ I+ ++ IAG GFINL L L ++ Sbjct: 61 GHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCETPEIAGPGFINLRLRTDVLARVA 120 Query: 103 SSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 S +V +GI K +V I++ + N MHVGH R ++GD +++ G+ Sbjct: 121 SDLVTDPNAGIAQAE----KPERVVIDYSAPNVAKQMHVGHLRSTIIGDCFNRVLSAQGH 176 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 V + +I D G Q L + + + S + + Y + AD+ Sbjct: 177 TVIPQNHIGDWGTQFGMLIEYIVEKRMDVDDFDLSGVEQLYQDSKKTFDADPQFADRARR 236 Query: 220 EL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-- 275 + L + + L I + ++ I + A + + ++++D G+ S D Sbjct: 237 RVVKLQGGDAETLRIWR-----TLIDISLEGFNATYARLSVLLTDEDVA-GESSYNDDLP 290 Query: 276 -IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334 ++D L G E D L + G D + K DG + Y Sbjct: 291 RVVDELVADGLAVE----------------DNGALCV--FVEGQDAPMIVRKRDGGFGYD 332 Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRL 391 A DLA + + + D +IYV S + + L VA A + + +V L Sbjct: 333 ATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAGFLPDDVEAEHVGYGMV-L 391 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML----WRKNSELLDFDFCKVKE--- 444 DG P K R G ++L ++DE + + + L + S L D+ E Sbjct: 392 GPDGRPFKT--REGGTVSLSDLLDEAETHAAPNIALAAIKYADLSNGLQKDYVFDAERMV 449 Query: 445 QSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 Q+ + Y+QYA+AR I R+A ++ P+ D D I E +E QL Sbjct: 450 QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMDWGRISVLDE--PAEQQLA 507 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 + L+ + ++E P+KL YLY+LA + + + P LR + ++ R Sbjct: 508 LLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYE---QCPVLR----STGEVRGSR 560 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L A ++ GL+++G+++P+ M Sbjct: 561 LALCAATRRVLGRGLDLLGIDAPDRM 586 >gi|332686748|ref|YP_004456522.1| arginyl-tRNA synthetase [Melissococcus plutonius ATCC 35311] gi|332370757|dbj|BAK21713.1| arginyl-tRNA synthetase [Melissococcus plutonius ATCC 35311] Length = 563 Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 136/591 (23%), Positives = 264/591 (44%), Gaps = 94/591 (15%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +E P+ HG ++ IL++ P IA + +I + + + + G ++N ++ Sbjct: 28 LETPKAVEHGDVAF-PTFILAKTYRKAPKQIATELAEKINT-TEFEKIAVVGP-YLNFFM 84 Query: 94 SPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 + ++++ +I+ YG IG+ + I+ S N P+ +GH R V+G+++A Sbjct: 85 CKEMISQQVIQTILQEKNHYGEYTIGENRNITIDMSSPNIAKPISMGHLRSTVIGNSIAL 144 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 ++ GY+ R ++ D G Q L ++ Y++ S+ P + L H+ + Sbjct: 145 ILKKIGYQPVRINHLGDWGTQFGKLIVA----YKKW----GSEEKVKMTPILELFHLYVK 196 Query: 213 LADKYS-SELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHRG 268 D+ +E LN W +++ +A + K R++ L+ N + + D + G Sbjct: 197 FHDEAEKNEELNDEARVWFKKLEEGDTEATQLWKWFREESLQEFNKIYAMLEVSFDSYNG 256 Query: 269 DP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 + + +I+ L + + E K + D+ +L P L Sbjct: 257 EAFYNDKMDEIVTMLEEKHLLEE-------DKGAEIVDLSSYEL------------NPAL 297 Query: 326 --KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV---------- 370 KSDG+ Y DLA Y K Y+ F +Y++G++ + + K+L+AV Sbjct: 298 IRKSDGATLYITRDLAAALYRKRTYD--FAKSLYIVGNEQAIHFKQLKAVLKELGFDWSD 355 Query: 371 -------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 +S +K ++ VLL E++ + +++++ + + V +V Sbjct: 356 DMKHIPFGLITQGGKKLSTRKGKV-VLLEEVLNEAIESANQQIAEKNPELMNREEVAKQV 414 Query: 418 GSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 G +V F L KN L +FDF V+ + + P YVQY +AR SI R+A + P Sbjct: 415 GIGAVIFHDL--KNDRLNNFDFVLDEVVQFEGETGP--YVQYTHARAMSILRKA-EFIPK 469 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 D + + N D+ ++I L E+P ++ A EP +A + LA F+ Sbjct: 470 ADTN-YALN--------DSESWRIIKLLQEFPTIVLTAADKYEPSVIAKHAIRLAQAFNK 520 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++ +++ + +N+K RL LV+A+ I+ L ++G+ +PNEM Sbjct: 521 YYA------QVKILTEDNQKEN--RLALVYALTIILKEDLRLLGLHAPNEM 563 >gi|260944172|ref|XP_002616384.1| hypothetical protein CLUG_03625 [Clavispora lusitaniae ATCC 42720] gi|238850033|gb|EEQ39497.1| hypothetical protein CLUG_03625 [Clavispora lusitaniae ATCC 42720] Length = 621 Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 130/560 (23%), Positives = 233/560 (41%), Gaps = 99/560 (17%) Query: 69 VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128 ++ +K + F K NL + + RK +YG +G G K+ IEF Sbjct: 118 LSEVKAEGQFLQFFFDKKCLFNLVIKDTLTRKT---------DYGYLPLGVGKKIIIEFS 168 Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188 S N P H GH R ++G L++L +G++VTR Y+ D G Q LA+ Sbjct: 169 SPNIAKPFHAGHLRSTIIGGFLSNLYEKAGWDVTRINYLGDWGKQFGLLAVGF------E 222 Query: 189 LYNNDSDL---PEGYYPGVYLKHVGKELADKYSSE------------LLNFPEEKWLPIV 233 Y ++S L P + VY+K V K++ D+ E + +E+ L + Sbjct: 223 KYGDESKLETDPINHLFEVYVK-VNKDITDEGDVEGGTNDKARAYFKRMEDGDEEALKMW 281 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 + + ++ K + D LNI++D++ E + ++++I +G V+E Sbjct: 282 RKFRDLSIEKYV-DTYSRLNIKYDVYSGESQVSQ---ESMKNVIKLFGEKGLVHE----- 332 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDN 351 DR L T + + L+ KSDG+ Y D+ +YE+ FD Sbjct: 333 -----------DRGAKLIDLTKFNKKLGKCLVEKSDGTSLYLTRDVGEAMKRYEQFHFDK 381 Query: 352 MIYVMGSD---HSG------------YVKRLEAV----AAAVSEKKAQINVLLCELVRLY 392 MIYV+ S H+ + K LE V +S +K + V L ++ Sbjct: 382 MIYVIASQQDLHTAQFFEILKQMGFDWAKNLEHVNFGMVQGMSTRKGTV-VFLDNILEET 440 Query: 393 RDGMPIKMSKRAGDFITL---RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKE 448 +D M M K + + + D +G +V + K +F + ++ + Sbjct: 441 KDKMHEVMKKNETKYAQIEDPEKIADLIGVSAVMIQDMQSKRINNYEFKWERMLSFEGDT 500 Query: 449 NPVFYVQYAYARCRSIFRQA---KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 P Y+QYA++R S+ R+A ++ + +FDL + +Q++ LA+Y Sbjct: 501 GP--YLQYAHSRLSSVQRKAGISEEKLKEANFDLLT----------EPCAVQMVRVLAQY 548 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 P +I+ A EP + YL++L + + + +V +L RL L A Sbjct: 549 PDIIKKALKTSEPSTIVTYLFNLTHLVSTCYD-------ILWVAGQEEELATARLALYAA 601 Query: 566 VASIINSGLNIIGVESPNEM 585 ++ +G+ ++G+ M Sbjct: 602 AKQVLYNGMVLLGLTPVERM 621 >gi|295131647|ref|YP_003582310.1| arginine--tRNA ligase [Propionibacterium acnes SK137] gi|291376321|gb|ADE00176.1| arginine--tRNA ligase [Propionibacterium acnes SK137] Length = 556 Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 138/566 (24%), Positives = 239/566 (42%), Gaps = 63/566 (11%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH +N A+ L++ P +A IVA++ I+ ++ IAG GFINL L L ++ Sbjct: 31 GHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCETPEIAGPGFINLRLRTDVLARVA 90 Query: 103 SSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 S +V +GI K +V I++ + N MHVGH R ++GD +++ G+ Sbjct: 91 SDLVTDPNAGIAQAE----KPERVVIDYSAPNVAKQMHVGHLRSTIIGDCFNRVLSAQGH 146 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 V + +I D G Q L + + + S + + Y + AD+ Sbjct: 147 TVIPQNHIGDWGTQFGMLIEYIVEKRMDVEDFDLSGVEQLYQDSKKTFDADPQFADRARR 206 Query: 220 EL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-- 275 + L + + L I + ++ I + A + + ++++D G+ S D Sbjct: 207 RVVKLQGGDAETLRIWR-----TLIDISLEGFNATYARLSVLLTDEDVA-GESSYNDDLP 260 Query: 276 -IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334 ++D L G E D L + G D + K DG + Y Sbjct: 261 RVVDELVADGLAVE----------------DNGALCV--FVEGQDAPMIVRKRDGGFGYD 302 Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRL 391 A DLA + + + D +IYV S + + L VA A + + +V L Sbjct: 303 ATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAGFLPDDVEAEHVGYGMV-L 361 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML----WRKNSELLDFDFCKVKE--- 444 DG P K R G ++L ++DE + + + L + S L D+ E Sbjct: 362 GPDGRPFKT--REGGTVSLSDLLDEAETHAAPNIALAAIKYADLSNGLQKDYVFDAERMV 419 Query: 445 QSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 Q+ + Y+QYA+AR I R+A ++ P+ D D I E +E QL Sbjct: 420 QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMDWGRISVLDE--PAEQQLA 477 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 + L+ + ++E P+KL YLY+LA + + + P LR + ++ R Sbjct: 478 LLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYE---QCPVLR----STGEVRGSR 530 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L A ++ GL+++G+++P+ M Sbjct: 531 LALCAATRRVLGRGLDLLGIDAPDRM 556 >gi|313808398|gb|EFS46865.1| arginyl-tRNA synthetase [Propionibacterium acnes HL087PA2] gi|313818180|gb|EFS55894.1| arginyl-tRNA synthetase [Propionibacterium acnes HL046PA2] gi|313821038|gb|EFS58752.1| arginyl-tRNA synthetase [Propionibacterium acnes HL036PA1] gi|313824084|gb|EFS61798.1| arginyl-tRNA synthetase [Propionibacterium acnes HL036PA2] gi|313827170|gb|EFS64884.1| arginyl-tRNA synthetase [Propionibacterium acnes HL063PA1] gi|314927063|gb|EFS90894.1| arginyl-tRNA synthetase [Propionibacterium acnes HL036PA3] gi|314961885|gb|EFT05986.1| arginyl-tRNA synthetase [Propionibacterium acnes HL002PA2] gi|314979613|gb|EFT23707.1| arginyl-tRNA synthetase [Propionibacterium acnes HL072PA2] gi|314988349|gb|EFT32440.1| arginyl-tRNA synthetase [Propionibacterium acnes HL005PA2] gi|314990245|gb|EFT34336.1| arginyl-tRNA synthetase [Propionibacterium acnes HL005PA3] gi|315083838|gb|EFT55814.1| arginyl-tRNA synthetase [Propionibacterium acnes HL027PA2] gi|315087297|gb|EFT59273.1| arginyl-tRNA synthetase [Propionibacterium acnes HL002PA3] gi|315089715|gb|EFT61691.1| arginyl-tRNA synthetase [Propionibacterium acnes HL072PA1] gi|327326622|gb|EGE68410.1| arginine--tRNA ligase [Propionibacterium acnes HL096PA3] gi|327449559|gb|EGE96213.1| arginyl-tRNA synthetase [Propionibacterium acnes HL013PA2] gi|328757404|gb|EGF71020.1| arginyl-tRNA synthetase [Propionibacterium acnes HL020PA1] Length = 582 Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 138/566 (24%), Positives = 239/566 (42%), Gaps = 63/566 (11%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH +N A+ L++ P +A IVA++ I+ ++ IAG GFINL L L ++ Sbjct: 57 GHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCETPEIAGPGFINLRLRTDVLARVA 116 Query: 103 SSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 S +V +GI K +V I++ + N MHVGH R ++GD +++ G+ Sbjct: 117 SDLVTDPNAGIAQAE----KPERVVIDYSAPNVAKQMHVGHLRSTIIGDCFNRVLSAQGH 172 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 V + +I D G Q L + + + S + + Y + AD+ Sbjct: 173 TVIPQNHIGDWGTQFGMLIEYIVEKRMDVDDFDLSGVEQLYQDSKKTFDADPQFADRARR 232 Query: 220 EL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-- 275 + L + + L I + ++ I + A + + ++++D G+ S D Sbjct: 233 RVVKLQGGDAETLRIWR-----TLIDISLEGFNATYARLSVLLTDEDVA-GESSYNDDLP 286 Query: 276 -IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334 ++D L G E D L + G D + K DG + Y Sbjct: 287 RVVDELVADGLAVE----------------DNGALCV--FVEGQDAPMIVRKRDGGFGYD 328 Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRL 391 A DLA + + + D +IYV S + + L VA A + + +V L Sbjct: 329 ATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAGFLPDDVEAEHVGYGMV-L 387 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML----WRKNSELLDFDFCKVKE--- 444 DG P K R G ++L ++DE + + + L + S L D+ E Sbjct: 388 GPDGRPFKT--REGGTVSLSDLLDEAETHAAPNIALAAIKYADLSNGLQKDYVFDAERMV 445 Query: 445 QSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 Q+ + Y+QYA+AR I R+A ++ P+ D D I E +E QL Sbjct: 446 QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMDWGRISVLDE--PAEQQLA 503 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 + L+ + ++E P+KL YLY+LA + + + P LR + ++ R Sbjct: 504 LLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYE---QCPVLR----STGEVRGSR 556 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L A ++ GL+++G+++P+ M Sbjct: 557 LALCAATRRVLGRGLDLLGIDAPDRM 582 >gi|159035826|ref|YP_001535079.1| arginyl-tRNA synthetase [Salinispora arenicola CNS-205] gi|157914661|gb|ABV96088.1| arginyl-tRNA synthetase [Salinispora arenicola CNS-205] Length = 572 Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 151/607 (24%), Positives = 247/607 (40%), Gaps = 121/607 (19%) Query: 38 RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 R H +AA+ L+R LG P IA ++ ++++ +V ++G GFINL ++ S Sbjct: 28 RRSQHADYQCDAALSLARRLGRRPRDIAAEVLGQVELADLCSAVAVSGPGFINLTVADSA 87 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 L +LS+ V G V +++ S N MHVGH R V+GD L+ + Sbjct: 88 LGTLLSTAAVDS-RLGVAPSAATETVIVDYSSPNVAKEMHVGHLRGTVIGDAAVRLLEWR 146 Query: 158 GYEVTREYYINDAGAQINTL--------------ALSV-----FWRYQQALYNNDSDLPE 198 G++V + ++ D G L LSV F++ + ++ D E Sbjct: 147 GHQVIKANHLGDWGTPFGMLIEHLLDLGESEAADELSVGDLDSFYKAARVKFDADDAFRE 206 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 V G EL + LL EK+ V D Q + Sbjct: 207 RAQRRVVALQRGDELTLRL-WRLLVAESEKYFLTVYD-------------------QLGV 246 Query: 259 FISEDDFHRGDP------SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312 ++E DF RG+ +P+ D +D L G+L + C +F Sbjct: 247 LLTERDF-RGESYYNEQLAPVTDELDRL--------GLL---RESGDAAC-------VFP 287 Query: 313 STMVGDDVDRPL----LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRL 367 + VG D +PL K DG + Y A DLA + + + G ++YV+G + + + Sbjct: 288 AGFVGRD-GQPLPIIVRKRDGGFGYGATDLAAIRHRTQDLGATRLLYVVGLPQRQHFELV 346 Query: 368 EAVA--AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------- 416 AVA A A+ L + L DG ++ R GD I L +++E Sbjct: 347 YAVAWQAGWLSPPARAEHLGFGSI-LGSDGKMLR--SRTGDSIKLVGLLEEAVTRAAELA 403 Query: 417 ------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 VG ++++ L ++ FD+ ++ N Y+QYA+ Sbjct: 404 RQKNPDLSATEVADVARAVGIGAIKYADLSTDRNKDYVFDWQRMLSLDG-NTAPYLQYAH 462 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 AR RSIFR+A + + F I + +E L + LA + V+ + + Sbjct: 463 ARIRSIFRRA-------EIEQFTPTPI---TVGHPAEHALALELAGFGAVVASVEQTLQF 512 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 ++LA YL+ LA+ F G + H P LR A RL L A ++ GL ++G Sbjct: 513 HRLAGYLHTLATTFSGFYEH---CPVLRAEDAVRDS----RLALCDLTARVLRQGLYLLG 565 Query: 579 VESPNEM 585 + +P+ M Sbjct: 566 IATPDRM 572 >gi|329116706|ref|ZP_08245423.1| arginine--tRNA ligase [Streptococcus parauberis NCFD 2020] gi|326907111|gb|EGE54025.1| arginine--tRNA ligase [Streptococcus parauberis NCFD 2020] Length = 562 Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 142/599 (23%), Positives = 249/599 (41%), Gaps = 108/599 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IE P++ G L+ A L++ L P IA + KI+ D +A +IN + Sbjct: 26 LIETPKNSEMGDLAF-PAFSLAKVLRKAPQMIASDLAE--KINADQFEKVVAIGPYINFF 82 Query: 93 LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+ S + + ++ ++ ++G+ IG G + ++ S N P VGH R V+GD++A Sbjct: 83 LNKSLISQDVMKDVITEKADFGQQHIGDGQNITLDMSSPNIAKPFSVGHLRSTVIGDSIA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 SL + GY + R ++ D G Q L ++ W +A+ + P +Y++ + Sbjct: 143 SLYSKLGYNLFRINHLGDWGKQFGMLIVAYKLWGDPKAVEAD----PIAELLKLYVR-IN 197 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD--------LKALNIQHDIFI 260 E +K L+ +W ++D +A + + RD+ + LNI D + Sbjct: 198 AEAEEKPE---LDEEARQWFKKLEDGDKEAWDLWQWFRDESLVEFNRIYEKLNITFDHYH 254 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 E ++ D + + E SK + D+++ L Sbjct: 255 GEAFYN-----------DKMDEGLQILEDKNLLHDSKGAKIVDLEKYNL----------- 292 Query: 321 DRPLL--KSDGSYTYFAADLAYFKCKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAV-- 374 P L KSDG+ Y D+A + +R FD IYV+G + S + K+L+AV + Sbjct: 293 -PPALIKKSDGATLYITRDMATAMYR-KRTFDFVKNIYVVGQEQSHHFKQLKAVLKEMGF 350 Query: 375 --SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------- 416 S+ ++ L + K+S R G+ I L +DE Sbjct: 351 DWSDDMVHVSFGLVTKNKK-------KLSTRKGNIILLEPTLDEAVSRALTQIEAKNPDL 403 Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFR 466 VG +++F L DFD V + + P YVQYAYAR +SI R Sbjct: 404 ENKEEVAKQVGIGAIKFYDLKTDRDNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILR 461 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 +A F + S DT ++I + + + I+ A +P +A Y Sbjct: 462 KAN----------FTPDASANYSLKDTESWEIIKLIQAFSKTIQRAAEKYDPSTIAKYAI 511 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA F+ +++H +++ R RL L ++ ++ L ++GVE+P +M Sbjct: 512 QLAQAFNKYYAHTH-----ILDESDERD---SRLALCYSTGIVLKEALRLLGVEAPEKM 562 >gi|323349209|gb|EGA83439.1| YDR341C-like protein [Saccharomyces cerevisiae Lalvin QA23] Length = 607 Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 133/545 (24%), Positives = 227/545 (41%), Gaps = 93/545 (17%) Query: 88 FINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 FI + +P +L K ++ I+ +YG + + KV IEF S N P H GH R ++ Sbjct: 109 FIQFFFNPQFLAKLVIPDILTRKEDYGSCKLVENKKVIIEFSSPNIAKPFHAGHLRSTII 168 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGV 204 G LA+L G+EV R Y+ D G Q LA+ F RY ++AL + P + V Sbjct: 169 GGFLANLYEKLGWEVIRMNYLGDWGKQFGLLAVG-FERYGNEEALVKD----PIHHLFDV 223 Query: 205 YLKHVGKELADKYSS---------------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249 Y++ + K++ ++ S + + +E+ L I K + ++ K I D Sbjct: 224 YVR-INKDIEEEGDSIPLEQSTNGKAREYFKRMEDGDEEALKIWKRFREFSIEKYI-DTY 281 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 LNI++D++ E + + ID +G +E D+ + Sbjct: 282 ARLNIKYDVYSGESQVSK---ESMLKAIDLFKEKGLTHE----------------DKGAV 322 Query: 310 LFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD---HSG-- 362 L T + + ++ KSDG+ Y D+ +YE+ FD MIYV+ S H+ Sbjct: 323 LIDLTKFNKKLGKAIVQKSDGTTLYLTRDVGAAMDRYEKYHFDKMIYVIASQQDLHAAQF 382 Query: 363 ----------YVKRLEAV----AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 + K L+ V +S +K + V L ++ ++ M M K + Sbjct: 383 FEILKQMGFEWAKDLQHVNFGMVQGMSTRKGTV-VFLDNILEETKEKMHEVMKKNENKYA 441 Query: 409 TLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSI 464 + H V D VG +V + K +F + ++ + P Y+QYA++R RS+ Sbjct: 442 QIEHPEEVADLVGISAVMIQDMQGKRINNYEFKWERMLSFEGDTGP--YLQYAHSRLRSV 499 Query: 465 FRQAKDI----FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520 R A I + + DF L + + LI L +YP V+ NA EP Sbjct: 500 ERNASGITQXKWINADFSLLK----------EPAAKLLIRLLGQYPDVLRNAIKTHEPTT 549 Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + YL+ L + + +V +L RL L A ++ +G+ ++G+ Sbjct: 550 VVTYLFKLTHQVSSCYD-------VLWVAGQTEELATARLALYGAARQVLYNGMRLLGLT 602 Query: 581 SPNEM 585 M Sbjct: 603 PVERM 607 >gi|227530448|ref|ZP_03960497.1| arginyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540] gi|227349626|gb|EEJ39917.1| arginyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540] Length = 566 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 148/604 (24%), Positives = 260/604 (43%), Gaps = 116/604 (19%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 IERP+D +G + L++ L P IA ++ +I D V +AG +IN +L Sbjct: 27 IERPKDSNNGDYAF-PTFFLAKSLHKAPQMIASELIEKID-QTGFDKVVVAGP-YINFFL 83 Query: 94 SPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 + + +L +I+ YG + +G V I++ S N PM +GH R ++G+ +A Sbjct: 84 DKANVGAGVLETILNDPEHYGESDLGHKANVTIDYSSPNIAKPMGMGHLRSTMIGEAIAR 143 Query: 153 LMAFSGYEVTREYYINDAGAQINT-LALSVFWRYQQALYNNDSDLPEGYYPGVYLK---- 207 ++ Y + R Y+ D G Q +A W Q + + P +Y++ Sbjct: 144 ILEKVNYNLIRIDYLGDWGTQFGKMMAAYKMWGDSQEVQDGLKSDPINTLLQLYVRINTE 203 Query: 208 --------HVGKELADKYSSELLNFPEEKW--LPIVKDYSVQAMMKIIRDDLKALNIQHD 257 G+E + ++L + EE W ++ S++ ++ L+++ D Sbjct: 204 ADEHPEYTDAGRE----WFAKLEHGDEEAWRLWHWFREISLERFQRV----YDMLDVKFD 255 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 F E + PI+ + D +G+L KS+ + D+++ L Sbjct: 256 SFNGEAFSAQKMEEPIQLLRD---------KGLL--KKSRGAEIVDLEQFNL-------- 296 Query: 318 DDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372 PLL KS+G+ TY DLA + K Y G +YV+G++ Y K+L Sbjct: 297 ----PPLLIIKSNGTTTYITRDLATALFRKRMY--GHAKSLYVVGAEQEVYFKQLRMALK 350 Query: 373 AVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD---------------- 415 + QI + L+ L +G KMS R G+ ++L V++ Sbjct: 351 ELGFNWWDQIEHISFGLMNL--NGQ--KMSTRKGNVVSLEDVLNDSVDLARKQIAEKNPD 406 Query: 416 ---------EVGSDSVRFMML--WRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRS 463 +VG +V F L +R+N+ ++F VK + + P YVQYA AR S Sbjct: 407 LKNADEVAKQVGIGAVIFHDLKNYRRNA--VNFKLEDVVKFEGETGP--YVQYARARAES 462 Query: 464 IFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 I R+ +D F D+D ++ +LI L++Y ++ A + +P + Sbjct: 463 ILRKGGIRD-FSDVDL-----------TQVGDGAWELISFLSQYGEAVKRAALNYDPSVV 510 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 A Y +LA F+ +++H R N+ RL L AV+ ++ S L ++ V++ Sbjct: 511 AKYALELAKKFNQYYAHNR--------ILNDDPQQPARLALTQAVSHVLKSALALLDVKA 562 Query: 582 PNEM 585 P+EM Sbjct: 563 PDEM 566 >gi|332994027|gb|AEF04082.1| arginyl-tRNA synthetase [Alteromonas sp. SN2] Length = 576 Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 147/595 (24%), Positives = 246/595 (41%), Gaps = 84/595 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I + R G N AM L++ L P IAE IV +K+D + +AG GFIN+ Sbjct: 25 IPVSRSARPEFGEYQFNGAMALAKQLRQKPRDIAEKIVEIVKLDDVASKLEVAGPGFINV 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTK--VNIEFVSANPTGPMHVGHCRCAVVGDT 149 +L+ +L ++ + R + K + V +++ S N MHVGH R ++GD Sbjct: 85 HLNNEWL----ANQCELALHDPRIGVAKSPEQTVVVDYSSPNLAKEMHVGHLRTTIIGDA 140 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 + ++ F G++V R+ ++ D G Q L + + +Q + Sbjct: 141 VVKVLEFLGHKVIRQNHMGDWGTQFGMLLAHLSDKLEQEVAET----------------A 184 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH---DIFI--SEDD 264 +L D Y + F +E+ D + + ++K+ D K L++ D+ I SED Sbjct: 185 LSDLEDFYREAKVRFDDEEGFA---DRAREYVVKLQGGDEKCLSLWEKFIDVSIAHSEDV 241 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 + + + S R I + + ++ K K D Q++F + D P Sbjct: 242 YKKLNVSLTRADIMGESAYNHDLANVISELKEKGIAVEDQG-AQVVFIPEL-ADKEGNPA 299 Query: 325 L----KSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 + KS G Y Y DLA +Y G D + + + + + K+ E V Sbjct: 300 VYIVQKSGGGYLYATTDLAAM--RYRSGTLNADRTLILTDARQALHFKQTEIVGRKAGFM 357 Query: 378 KAQINVLLCEL-VRLYRDGMPIKMS---------------KRAGDFIT----------LR 411 + C + L DG P K +RAG I L Sbjct: 358 EEAQTYEHCPFGMMLGSDGKPFKTRTGGTVKLVELLDEAVERAGKLIAERDNDLSADELA 417 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARCRSIFRQAKD 470 V +VG +V++ L + + D+ F S E N Y+QYAY R +S+FR+A Sbjct: 418 EVARKVGIGAVKYADLSKNRT--TDYMFNWDTMLSFEGNTAPYLQYAYTRVKSLFRKAGV 475 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 + D+ N++ ++ E L V L ++ V+ + P+ L YLY+LAS Sbjct: 476 AIETMPVDI---NIVEKQ------EHALSVLLLQFEEVVGLVSRDATPHVLCTYLYELAS 526 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + P L+ K+ RL L VAS ++ GLN++G+E+ +M Sbjct: 527 AFMSFY---EACPMLK--DGIELKVRDSRLALSALVASTLSQGLNLLGIETLEKM 576 >gi|145627706|ref|ZP_01783507.1| arginyl-tRNA synthetase [Haemophilus influenzae 22.1-21] gi|144979481|gb|EDJ89140.1| arginyl-tRNA synthetase [Haemophilus influenzae 22.1-21] Length = 577 Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 140/594 (23%), Positives = 239/594 (40%), Gaps = 104/594 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LGL+P A+ ++ +++ + + IAG GFIN++L+P++L + Sbjct: 37 GDYQANGIMAAAKKLGLNPREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 S+ +S G K T V I++ S N MHVGH R ++GD +A + F G+ V Sbjct: 97 SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220 R ++ D G Q L + Q + ++ +L E +Y A K+ E Sbjct: 155 RANHVGDWGTQFGMLI--AYLEKMQNEHASEMELQDLEAFY----------REAKKHYDE 202 Query: 221 LLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNIQH-----DIFISEDDFHRGDP- 270 F E+ +VK D +AM K + D N QH ++ ++E D G+ Sbjct: 203 DEIFAEKARNYVVKLQSGDEYCRAMWKRLVDITMQQN-QHNYARLNVTLTEKDV-MGESL 260 Query: 271 -SP-IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 +P + I+++L +QG E G L + K GD + + K Sbjct: 261 YNPMLPSIVEDLKKQGLAVENDGALVVYLDEFKNK--------------EGDPMGVIVQK 306 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY--------VKRLEAVAAAVSEKK 378 DG + Y D+A K +YE N V ++ V + S + Sbjct: 307 KDGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEH 366 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 ++L +DG P K R G + L ++DE Sbjct: 367 KNFGMMLG------KDGKPFKT--RIGGTVKLADLLDEAIERATVLINEKNTNLSNDEKE 418 Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VG +V++ L + + FD+ + + N Y+QYAY R RSIF + Sbjct: 419 AVIEAVGIGAVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNKT--- 474 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 D + P + D E L + L ++ ++ P+ L YLY+LA + Sbjct: 475 ----DINSTALLAAPLTIK-DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYELAGI 529 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + H + A + + + RL+L + GL ++G+++ +M Sbjct: 530 FSSFYEH------CPILNAEDESIKLSRLKLALLTEKTLKQGLTLLGIKTVEKM 577 >gi|320539876|ref|ZP_08039535.1| arginyl-tRNA synthetase [Serratia symbiotica str. Tucson] gi|320030062|gb|EFW12082.1| arginyl-tRNA synthetase [Serratia symbiotica str. Tucson] Length = 576 Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 140/586 (23%), Positives = 244/586 (41%), Gaps = 89/586 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G+ N M ++ LG+ P +AE ++ +++ V IAG GFIN++L+ ++L + + Sbjct: 37 GNYQVNGVMSAAKKLGMPPRQLAEKVLQLLELGDIASKVEIAGPGFINIFLNSAWLARQI 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 V++ E G + T V I++ + N MHVGH R ++GD A + F G+ V Sbjct: 97 D-WVLNAPELGVTAVEPQTIV-IDYSAPNVAKEMHVGHLRSTIIGDAAARTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGKELADKYSSEL 221 R ++ D G Q L Y + + N N SD+ Y + A K+ E Sbjct: 155 RANHVGDWGTQFGMLI-----AYLEKMQNENASDMGLSDLEQFYRQ------AKKHYDED 203 Query: 222 LNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNI----QHDIFISEDDFHRGDP--- 270 F +VK D Q M + + D A N + ++ ++E D G+ Sbjct: 204 SEFAARARAYVVKLQGGDPYCQKMWRKLVDITMAQNQLTYNRLNVTLTEGDV-MGESLYN 262 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + + I+ +L +G E S+ +D Q G+ + + K DG Sbjct: 263 AMLPGIVADLKAKGLAVE-------SEGATVVFLDEYQ-----NKDGEPMGVIIQKKDGG 310 Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLC 386 Y Y DLA K +YE G + ++Y S ++ + A+ A V E + + L Sbjct: 311 YLYTTTDLACAKYRYETLGANRVLYYTDSRQHQHLMQAWAIVRKAGYVPESVSLEHHLFG 370 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGS 419 + L +DG P K RAG + L ++DE VG Sbjct: 371 MM--LGKDGKPFK--TRAGGTVKLSDLLDEAIERAGQLIAGKNPHMPAQEITQLARVVGI 426 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 +V++ L + + FD+ + + N Y+QYAY R S+F++A L L Sbjct: 427 GAVKYSDLSKSRTTDYIFDWNNMLA-FEGNTAPYMQYAYTRIVSVFKRAGIDESSLTLPL 485 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 V+ +E E+ L L ++ + P+ + YLY+LA +F + H Sbjct: 486 ----VMSEE-----HEIALATRLLQFEEALTAVAREGTPHIMCSYLYELAGLFSSFYEH- 535 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + ++ + RL+L + + +GL+ +G+E+ M Sbjct: 536 -----CQILNGDSEAVRQSRLKLALLTSRTLKTGLDTLGIETVERM 576 >gi|313123500|ref|YP_004033759.1| arginyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280063|gb|ADQ60782.1| Arginyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 565 Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 150/604 (24%), Positives = 258/604 (42%), Gaps = 113/604 (18%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + IERP+D G + L++ + P IA + KID A +IN Sbjct: 25 VKIERPKDEKLGDYAF-PTFTLAKTMRKAPNLIAAELAE--KIDQGSFEKVEAVGPYINF 81 Query: 92 YLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +L S IL I+ YG +G G V+ E+ S N PM +GH R ++G+ + Sbjct: 82 FLDKSQTGAAILREILADPENYGARDLGHGRNVSTEYSSPNIAKPMGMGHLRSTMIGEAI 141 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE-------GYYPG 203 A ++A G++ R Y+ D G Q + + ++ ND+D+ + YY Sbjct: 142 ARILAKEGFKPIRIDYLGDWGTQFGKMMAAY------KMWGNDADIEKDPINTLLSYY-- 193 Query: 204 VYLKHVGKELAD------KYSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDDLKALNIQ 255 V + +E + ++ S+L + EE + ++ S++ K+ L++ Sbjct: 194 VRINREAEEHPEYDEEGREWFSKLEHGDEEAKRLWSWFREVSLERFKKV----YNMLDVH 249 Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315 D F E + PI+ + R+ +G+L KS+ + D+++ L Sbjct: 250 FDSFTGEAFSAQMMDEPIQ-----ILRE----KGLLV--KSQGAEIVDLEKYNL------ 292 Query: 316 VGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 PL+ KS+G+ TY DLA Y K Y GF IYV+G + Y ++L A Sbjct: 293 ------PPLMVIKSNGTSTYITRDLATAMYRKKTY--GFYKSIYVVGQEQEVYFQQLRAC 344 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------- 416 + A +++ + +G KMS R G+ + L V++E Sbjct: 345 LKEMGFDWAD-DIVHISFGLMSINGQ--KMSTRKGNVVNLEDVLNESVDLARKQISEKNV 401 Query: 417 -----------VGSDSVRFMML--WRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCR 462 VG +V F L +R+N +DF+ + VK + + P YVQY+ AR Sbjct: 402 GLKNADEVAKQVGIGAVVFHDLKNYRRNP--VDFNLEEVVKFEGETGP--YVQYSRARGE 457 Query: 463 SIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 S+ R++ F D D ++ E L+ + Y I+ A +P + Sbjct: 458 SLLRKSGITDFSDADL-----------TKIGAEEWDLVSFMGRYADTIQKAMETYDPSAI 506 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 A Y +LA F+ +++H R V + + RL +V AV+ +I S L+++ V++ Sbjct: 507 AKYALELAKRFNKYYAHTR-----ILVDDVDEDVKKARLAVVQAVSHVIKSALDLLDVKA 561 Query: 582 PNEM 585 P+EM Sbjct: 562 PDEM 565 >gi|183598986|ref|ZP_02960479.1| hypothetical protein PROSTU_02431 [Providencia stuartii ATCC 25827] gi|188021202|gb|EDU59242.1| hypothetical protein PROSTU_02431 [Providencia stuartii ATCC 25827] Length = 576 Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 131/578 (22%), Positives = 238/578 (41%), Gaps = 73/578 (12%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ +G++P +AE IV+ + ++ V IAG GFIN++L PS+L + Sbjct: 37 GDYQANGVMGAAKKMGINPRQLAEQIVSHLDLEGIASKVEIAGPGFINIFLEPSWLTTQV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + G + + K + I++ + N MHVGH R ++GD A + F G++V Sbjct: 97 EQALTCD-RLGLSSV-KSETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGKELADKYSSEL 221 R ++ D G Q L Y + + N N SD+ Y +E Y S+ Sbjct: 155 RANHVGDWGTQFGMLIA-----YLEKMQNENASDMALADLEEFY-----REAKQHYDSDE 204 Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281 + F E +VK S + + L + +Q + ++ + R + + D + + Sbjct: 205 V-FAERARGYVVKLQSGDEYCRKMWRKLVDITMQQN----QETYRRLNVTLTEDDVMGES 259 Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSDGSYTYFAADL 338 + GI+ K+K + + +++ T G+ + + K DG + Y D+ Sbjct: 260 LYNDMLPGIVADLKAKGL-AVESEGATVVYLDEFKTKEGEPMGVIVQKKDGGFLYTTTDI 318 Query: 339 AYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRD 394 A K ++E D +Y + S ++ + + A + E + + + + L +D Sbjct: 319 ACAKYRHEVLHADRALYYIDSRQHQHLMQAWTIVRKAGYIPESMSLEHHMFGMM--LGKD 376 Query: 395 GMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMML 427 G P K R+G + L ++DE VG SV++ L Sbjct: 377 GKPFK--TRSGGTVRLSDLLDEAIERAQVLIRSKNPDMPEDELNNVANVVGIGSVKYADL 434 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487 + + FD+ + + N Y+QYAY R SIF++A DL + + Sbjct: 435 SKSRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVASIFKKANVTQADLTLPIVLQ----- 488 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 D E+ L L ++ I P+ + YLYDLA +F + H Sbjct: 489 ----DPREIALATRLMQFEETILMVARDGTPHVMCAYLYDLAGLFSSFYEH------CPI 538 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A + RL+L + +GL+ +G+++ M Sbjct: 539 LSAEDEAQRQSRLKLALLTQKTLKAGLDTLGIDTVERM 576 >gi|283798365|ref|ZP_06347518.1| arginine--tRNA ligase [Clostridium sp. M62/1] gi|291073949|gb|EFE11313.1| arginine--tRNA ligase [Clostridium sp. M62/1] Length = 628 Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 136/608 (22%), Positives = 256/608 (42%), Gaps = 87/608 (14%) Query: 25 EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84 ++K + V RP C + N AM ++ P+ IA +V + K + Sbjct: 61 DEKYVKVTVSNRPDLCEY---QCNGAMAAAKAYKKKPIDIANEVVEKAKESRMFSEIGAV 117 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 GFINL +SP YL ++ + +YG + I++ AN P+HVGH R A Sbjct: 118 MPGFINLRISPEYLAGYMNEMAADE-KYGLEETKAPETIIIDYGGANVAKPLHVGHLRSA 176 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-------DLP 197 V+G+++ + + G+ V + ++ D G Q+ + + R + Y ++S + P Sbjct: 177 VIGESIKRISRYMGHHVISDVHLGDWGLQMGLIIEELHDRQPELPYFDESFTGEYPEEAP 236 Query: 198 ------EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP--IVKDYSVQAMMKIIRDDL 249 E YP K E + + E + + P + + + +K ++ + Sbjct: 237 FTISELEEIYPAASAKSKVDEAFKERAQEATFKLQSGYAPYRAIWKHIMNVSLKDLKRNY 296 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRK 307 LN+ D++ E D P+ I+D+ID +G YE G L ++ T D K Sbjct: 297 GNLNVSFDLWKGESDAQPYIPALIQDLID----KGLAYESQGALVVDIAEET-----DSK 347 Query: 308 QLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSGY 363 +L P + KSDG+ Y +DLA + E+ F D IYV+ + Sbjct: 348 EL------------PPCIVRKSDGAALYATSDLATI-VQREQDFHPDRYIYVVDKRQELH 394 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 ++ VA K ++ + +DG P K R G + L H++DE+ + Sbjct: 395 FTQVFRVAKKAGIVKDDTKMIFLGFGTMNSKDGGPFKT--RDGGVMRLEHLIDEIDEEVY 452 Query: 423 RFMM--------LWRKNSELLDFDFCK---VKEQSKENPVF--------------YVQYA 457 R + R+ +E++ K + Q+ ++ VF ++QY Sbjct: 453 RKIQEKQRVPEEEMRRTAEMIGLAALKYGDLSNQATKDYVFDVDRFISFEGNTGPHIQYM 512 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 R +SI + ++ + L P + P SE +E +L + L + V+E+A Sbjct: 513 VVRIKSILEKYGELMGGT-YSLIP--IRPAASE---TEKKLQLELCRFGEVVESAFAETA 566 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 P+++ Y+YDL+ F+ + + + +R+ + L+ ++N+ ++++ Sbjct: 567 PHRICQYMYDLSDAFNNFYLVN------KIIGEEDREKQAGFISLISLTKDVLNACMDLL 620 Query: 578 GVESPNEM 585 G+E+P M Sbjct: 621 GMEAPEHM 628 >gi|148826102|ref|YP_001290855.1| arginyl-tRNA synthetase [Haemophilus influenzae PittEE] gi|229847101|ref|ZP_04467206.1| arginyl-tRNA synthetase [Haemophilus influenzae 7P49H1] gi|166232791|sp|A5UCH1|SYR_HAEIE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|148716262|gb|ABQ98472.1| arginyl-tRNA synthetase [Haemophilus influenzae PittEE] gi|229809930|gb|EEP45651.1| arginyl-tRNA synthetase [Haemophilus influenzae 7P49H1] Length = 577 Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 139/594 (23%), Positives = 238/594 (40%), Gaps = 104/594 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LGL+P A+ ++ +++ + + IAG GFIN++L+P++L + Sbjct: 37 GDYQANGIMAAAKKLGLNPREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 S+ +S G K T V I++ S N MHVGH R ++GD +A + F G+ V Sbjct: 97 SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220 R ++ D G Q L + Q + ++ +L E +Y A K+ E Sbjct: 155 RANHVGDWGTQFGMLI--AYLEKMQNEHASEMELQDLEAFY----------REAKKHYDE 202 Query: 221 LLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNIQH-----DIFISEDDFHRGDP- 270 F E+ +VK D +AM K + D N QH ++ ++E D G+ Sbjct: 203 DEIFAEKARNYVVKLQGGDEYCRAMWKRLVDITMQQN-QHNYDRLNVTLTEKDV-MGESL 260 Query: 271 -SP-IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 +P + I+++L +QG E G L + K GD + + K Sbjct: 261 YNPMLPSIVEDLKKQGLAVEDDGALVVYLDEFKNK--------------EGDPMGVIVQK 306 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY--------VKRLEAVAAAVSEKK 378 DG + Y D+A K +YE N V ++ V + S + Sbjct: 307 KDGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEH 366 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 ++L +DG P K R G + L ++DE Sbjct: 367 KNFGMMLG------KDGKPFKT--RTGGTVKLADLLDEAIERATVLINEKNTNLSNDEKQ 418 Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 +G SV++ L + + FD+ + + N Y+QYAY R RSIF + + Sbjct: 419 AVIEAIGIGSVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNKTE-- 475 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 P + D E L + L ++ ++ P+ L YLY+LA + Sbjct: 476 INSTALLAAPLTIK------DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYELAGI 529 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + H + A + + + RL+L + GL ++G+++ +M Sbjct: 530 FSSFYEH------CPILNAEDEAVKLSRLKLALLTEKTLKQGLELLGIKTVEKM 577 >gi|17231209|ref|NP_487757.1| arginyl-tRNA synthetase [Nostoc sp. PCC 7120] gi|23822197|sp|Q8YQU9|SYR_ANASP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|17132851|dbj|BAB75416.1| arginyl-tRNA-synthetase [Nostoc sp. PCC 7120] Length = 588 Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 144/596 (24%), Positives = 241/596 (40%), Gaps = 100/596 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N A+ LS+ LG P IA IV ++ + + IAG GFINL L +YL L Sbjct: 40 GDYQANVALSLSKKLGQQPRAIASAIVEKLDVSEICEKPEIAGPGFINLKLKTAYLEAQL 99 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 ++I + G + ++F S N MHVGH R ++GD++A ++ F G++V Sbjct: 100 NTIQ-ADTRLGVPTAKHPQREIVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFRGHDVL 158 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS--- 219 R ++ D G Q L YL+ V E ++ Sbjct: 159 RLNHVGDWGTQFGMLI-------------------------TYLREVSPEALTTANALDI 193 Query: 220 -ELLNFPEEKWLPIVKDYSVQ--AMMKIIRDDLKALNIQHDI-FISEDDFHRGDPSPIRD 275 +L++F + D + Q A +++R A + H + E R + I D Sbjct: 194 GDLVSFYRQAKQRFDADEAFQETARQEVVRLQAGAADTLHAWKLLCEQS--RQEFQVIYD 251 Query: 276 IID-NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-----PLL--KS 327 ++D L +G + L P + +K + + + + +R PL+ KS Sbjct: 252 LLDVKLTERGESFYNPLLPTVVENLEKSGLLVENQGAKCVFLDGFTNREGEPLPLIVQKS 311 Query: 328 DGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386 DG Y Y DLA + + ++ +IY+ + + + + VA +KA Sbjct: 312 DGGYNYATTDLAALRYRIQKDEAKRIIYITDAGQANHFAQFFQVA-----RKAGWIPDDV 366 Query: 387 ELVR------LYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416 ELV L DG K R+GD + LR ++DE Sbjct: 367 ELVHVPFGLVLGEDGK--KFKTRSGDTVRLRDLLDEAISRAHADVEVRLKAEEREETAEF 424 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 VG +V++ L + + F + K+ + K N Y+ YAYAR + I R+ + Sbjct: 425 IDKVAEVVGISAVKYADLSQNRTSNYIFSYDKMLD-LKGNTAPYMLYAYARIQGISRKGE 483 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 F DL + + ++ E+EF L +L + VI P +L YLY+L+ Sbjct: 484 INFADLGDN--AKVILQHETEF-----ALAKYLLQLGEVISTVEEDLSPNRLCEYLYELS 536 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ + N ++ + A L RL L A + GL+++G++ M Sbjct: 537 KRFNAFYDR---NQGVQVLSAEE-PLRTSRLVLCDLTARTLKLGLSLLGIQVLERM 588 >gi|6320548|ref|NP_010628.1| hypothetical protein YDR341C [Saccharomyces cerevisiae S288c] gi|2501051|sp|Q05506|SYRC_YEAST RecName: Full=Arginyl-tRNA synthetase, cytoplasmic; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|5821887|pdb|1BS2|A Chain A, Yeast Arginyl-Trna Synthetase gi|14719542|pdb|1F7U|A Chain A, Crystal Structure Of The Arginyl-Trna Synthetase Complexed With The Trna(Arg) And L-Arg gi|14719544|pdb|1F7V|A Chain A, Crystal Structure Of Yeast Arginyl-Trna Synthetase Complexed With The Trnaarg gi|1230668|gb|AAB64777.1| Ydr341cp [Saccharomyces cerevisiae] gi|256269806|gb|EEU05069.1| YDR341C-like protein [Saccharomyces cerevisiae JAY291] gi|285811358|tpg|DAA12182.1| TPA: hypothetical protein YDR341C [Saccharomyces cerevisiae S288c] Length = 607 Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 133/545 (24%), Positives = 227/545 (41%), Gaps = 93/545 (17%) Query: 88 FINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 FI + +P +L K ++ I+ +YG + + KV IEF S N P H GH R ++ Sbjct: 109 FIQFFFNPQFLAKLVIPDILTRKEDYGSCKLVENKKVIIEFSSPNIAKPFHAGHLRSTII 168 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGV 204 G LA+L G+EV R Y+ D G Q LA+ F RY ++AL + P + V Sbjct: 169 GGFLANLYEKLGWEVIRMNYLGDWGKQFGLLAVG-FERYGNEEALVKD----PIHHLFDV 223 Query: 205 YLKHVGKELADKYSS---------------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249 Y++ + K++ ++ S + + +E+ L I K + ++ K I D Sbjct: 224 YVR-INKDIEEEGDSIPLEQSTNGKAREYFKRMEDGDEEALKIWKRFREFSIEKYI-DTY 281 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 LNI++D++ E + + ID +G +E D+ + Sbjct: 282 ARLNIKYDVYSGESQVSK---ESMLKAIDLFKEKGLTHE----------------DKGAV 322 Query: 310 LFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD---HSG-- 362 L T + + ++ KSDG+ Y D+ +YE+ FD MIYV+ S H+ Sbjct: 323 LIDLTKFNKKLGKAIVQKSDGTTLYLTRDVGAAMDRYEKYHFDKMIYVIASQQDLHAAQF 382 Query: 363 ----------YVKRLEAV----AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 + K L+ V +S +K + V L ++ ++ M M K + Sbjct: 383 FEILKQMGFEWAKDLQHVNFGMVQGMSTRKGTV-VFLDNILEETKEKMHEVMKKNENKYA 441 Query: 409 TLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSI 464 + H V D VG +V + K +F + ++ + P Y+QYA++R RS+ Sbjct: 442 QIEHPEEVADLVGISAVMIQDMQGKRINNYEFKWERMLSFEGDTGP--YLQYAHSRLRSV 499 Query: 465 FRQAKDI----FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520 R A I + + DF L + + LI L +YP V+ NA EP Sbjct: 500 ERNASGITQEKWINADFSLLK----------EPAAKLLIRLLGQYPDVLRNAIKTHEPTT 549 Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + YL+ L + + +V +L RL L A ++ +G+ ++G+ Sbjct: 550 VVTYLFKLTHQVSSCYD-------VLWVAGQTEELATARLALYGAARQVLYNGMRLLGLT 602 Query: 581 SPNEM 585 M Sbjct: 603 PVERM 607 >gi|28897635|ref|NP_797240.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633] gi|153838587|ref|ZP_01991254.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810] gi|260365999|ref|ZP_05778484.1| arginine--tRNA ligase [Vibrio parahaemolyticus K5030] gi|260878212|ref|ZP_05890567.1| arginine--tRNA ligase [Vibrio parahaemolyticus AN-5034] gi|260895648|ref|ZP_05904144.1| arginine--tRNA ligase [Vibrio parahaemolyticus Peru-466] gi|31076998|sp|Q87RD6|SYR_VIBPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|28805847|dbj|BAC59124.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633] gi|149748005|gb|EDM58864.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810] gi|308088188|gb|EFO37883.1| arginine--tRNA ligase [Vibrio parahaemolyticus Peru-466] gi|308090109|gb|EFO39804.1| arginine--tRNA ligase [Vibrio parahaemolyticus AN-5034] gi|308111274|gb|EFO48814.1| arginine--tRNA ligase [Vibrio parahaemolyticus K5030] Length = 577 Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 138/603 (22%), Positives = 237/603 (39%), Gaps = 122/603 (20%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-- 100 G N M +++ LG +P A+ ++ + +D IAG GFIN++LS +L K Sbjct: 37 GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96 Query: 101 ---ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + S + E + ++ ++ + N MHVGH R ++GD + + F Sbjct: 97 DAALADSRLGVAAEEAQTIVA-------DYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFL 149 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYY-PGVYLKHVGKELA 214 G++V R +I D G Q L ++ R QQ +L EG+Y L +E A Sbjct: 150 GHKVIRANHIGDWGTQFGML-IANLERVQQESGEVSMELADLEGFYRESKKLYDEDEEFA 208 Query: 215 DKYSSELL------NFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNIQHDIFIS 261 K + ++ F E W +V +Q + + RDD+ ++ +D+ Sbjct: 209 VKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESMYNDM--- 265 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GD 318 + I+ +L QG E D Q++F G+ Sbjct: 266 -----------LPKIVADLKAQGLAVED---------------DGAQVVFLEEFKNKDGE 299 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370 + + K DG + Y D+A K +YE G D ++Y + S + V++ V Sbjct: 300 AMGVIVQKRDGGFLYTTTDIACAKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYV 359 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430 +VS + ++L +DG P K RAG + L ++DE + + ++ K Sbjct: 360 PESVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRAAQ--LIESK 409 Query: 431 NSEL-----------LDFDFCKVKEQSKE-----------------NPVFYVQYAYARCR 462 N EL + K + SK N Y+QYAY R Sbjct: 410 NPELDAEEKEKISKTVAMAAVKYSDLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVA 469 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 SIF +A +L D+ D E LI L ++ +++ +P+ + Sbjct: 470 SIFAKAGVAMDELQGDI---------QITDEKEKALIAKLLQFEEAVQSVAREGQPHIMC 520 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 YL++LA F + + A + + RL+L A I GL+++G+E+ Sbjct: 521 SYLFELAGQFSSFYEA------CPILVAEDEAVKQSRLKLAALTAKTIKQGLSLLGIETL 574 Query: 583 NEM 585 M Sbjct: 575 ERM 577 >gi|54308257|ref|YP_129277.1| arginyl-tRNA synthetase [Photobacterium profundum SS9] gi|81400047|sp|Q6LTA1|SYR_PHOPR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|46912685|emb|CAG19475.1| putative arginyl-tRNA synthetase [Photobacterium profundum SS9] Length = 576 Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 134/601 (22%), Positives = 233/601 (38%), Gaps = 119/601 (19%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL---- 98 G N M +++ LG +P A+ ++ + +D + V IAG GFIN++L S+L Sbjct: 37 GDYQANGVMGVAKKLGTNPREFAQKVIDVLDLDGIAEKVEIAGPGFINIFLDKSWLAARA 96 Query: 99 -RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + E +N++ +++ + N MHVGH R ++GD + + F Sbjct: 97 EEALTDDRIGVAAEKQQNIV-------VDYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFL 149 Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198 G+ V R +I D G Q L L F+R + LY+ D + Sbjct: 150 GHNVVRANHIGDWGTQFGMLIANLERVQNETGEVSMELADLEGFYRESKKLYDEDEEFAV 209 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 V V + D+Y +E+ W +V VQ + Sbjct: 210 RARAFV----VKLQSGDEYCAEM-------WKKLVDVTMVQNQI---------------- 242 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR---STM 315 ++ R + S RD + + Y+ GI+ K K + D Q++F Sbjct: 243 -----NYDRLNVSLTRDNVMGESMYNYMLPGIVADLKEKGL-AVESDGAQVVFLDEYKNK 296 Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAV 374 GD + + K DG + Y D+A K ++E+ D ++Y + S ++ + ++ Sbjct: 297 DGDPMGVIIQKRDGGFLYTTTDIACAKYRFEQLNADRVLYFIDSRQHQHLMQAWSIVRKA 356 Query: 375 SEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------- 416 ++ + + L +DG P K RAG + L ++DE Sbjct: 357 GYVPEEVTLEHHAFGMMLGKDGRPFKT--RAGGTVRLADLLDESEVRAAKLIEAKNPDLD 414 Query: 417 ----------VGSDSVRFMML--WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 V +V++ L R + D+D E N Y+QYAY R SI Sbjct: 415 TAEKDKIAKTVAMAAVKYADLSKHRTTDYIFDWDNMLAFEG---NTAPYMQYAYTRVASI 471 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 F++A DL + D E L+ L ++ + N + +P+ + Y Sbjct: 472 FKRADVNLADLTHPIVIN---------DEKEQALLSTLLQFEEAVLNVSREGQPHLMCTY 522 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 L++LA F + P L +A + RL+L A I GL+++G+E+ Sbjct: 523 LFELAGKFSSFYEAC---PILNAEEA----VKQSRLKLALLTAKTIKQGLDLLGIETLER 575 Query: 585 M 585 M Sbjct: 576 M 576 >gi|259145577|emb|CAY78841.1| EC1118_1D0_6315p [Saccharomyces cerevisiae EC1118] Length = 607 Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 133/545 (24%), Positives = 226/545 (41%), Gaps = 93/545 (17%) Query: 88 FINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 FI + +P +L K ++ I+ +YG + + KV IEF S N P H GH R ++ Sbjct: 109 FIQFFFNPQFLAKLVIPDILTRKEDYGSCKLVENKKVIIEFSSPNIAKPFHAGHLRSTII 168 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGV 204 G LA+L G+EV R Y+ D G Q LA+ F RY ++AL + P + V Sbjct: 169 GGFLANLYEKLGWEVIRMNYLGDWGKQFGLLAVG-FERYGNEEALVKD----PIHHLFDV 223 Query: 205 YLKHVGKELADKYSS---------------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249 Y++ + K++ ++ S + + +E+ L I K + ++ K I D Sbjct: 224 YVR-INKDIEEEGDSIPLEQSTNGKAREYFKRMEDGDEEALKIWKRFREFSIEKYI-DTY 281 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 LNI++D++ E + + ID +G +E D+ + Sbjct: 282 ARLNIKYDVYSGESQVSK---ESMLKAIDLFKEKGLTHE----------------DKGAV 322 Query: 310 LFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD---HSG-- 362 L T + + ++ KSDG+ Y D+ +YE+ FD MIYV+ S H+ Sbjct: 323 LIDLTKFNKKLGKAIVQKSDGTTLYLTRDVGAAMDRYEKYHFDKMIYVIASQQDLHAAQF 382 Query: 363 ----------YVKRLEAV----AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 + K L+ V +S +K + V L ++ ++ M M + + Sbjct: 383 FEILKQMGFEWAKDLQHVNFGMVQGMSTRKGTV-VFLDNILEETKEKMHEVMKRNENKYA 441 Query: 409 TLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSI 464 + H V D VG +V + K +F + ++ + P Y+QYA++R RS+ Sbjct: 442 QIEHPEEVADLVGISAVMIQDMQGKRINNYEFKWERMLSFEGDTGP--YLQYAHSRLRSV 499 Query: 465 FRQAKDIFPD----LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520 R A I D DF L + + LI L +YP V+ NA EP Sbjct: 500 ERNASGITQDKWINADFSLLK----------EPAAKLLIRLLGQYPDVLRNAIKTHEPTT 549 Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + YL+ L + + +V +L RL L A ++ +G+ ++G+ Sbjct: 550 VVTYLFKLTHQVSSCYD-------VLWVAGQTEELATARLALYGAARQVLYNGMRLLGLT 602 Query: 581 SPNEM 585 M Sbjct: 603 PVERM 607 >gi|332676510|gb|AEE73326.1| arginine--tRNA ligase [Propionibacterium acnes 266] Length = 556 Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 138/566 (24%), Positives = 239/566 (42%), Gaps = 63/566 (11%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH +N A+ L++ P +A IVA++ I+ ++ IAG GFINL L L ++ Sbjct: 31 GHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCETPEIAGPGFINLRLRTDVLARVA 90 Query: 103 SSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 S +V +GI K +V I++ + N MHVGH R ++GD +++ G+ Sbjct: 91 SDLVTDPNAGIAQAE----KPERVVIDYSAPNVAKQMHVGHLRSTIIGDCFNRVLSAQGH 146 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 V + +I D G Q L + + + S + + Y + AD+ Sbjct: 147 TVIPQNHIGDWGTQFGMLIEYIVEKRMDVDDFDLSGVEQLYQDSKKTFDADPQFADRARR 206 Query: 220 EL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-- 275 + L + + L I + ++ I + A + + ++++D G+ S D Sbjct: 207 RVVKLQGGDAETLRIWR-----TLIDISLEGFNATYARLSVLLTDEDVA-GESSYNDDLP 260 Query: 276 -IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334 ++D L G E D L + G D + K DG + Y Sbjct: 261 RVVDELVADGLAVE----------------DNGALCV--FVEGQDAPMIVRKRDGGFGYD 302 Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRL 391 A DLA + + + D +IYV S + + L VA A + + +V L Sbjct: 303 ATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAGFLPDDVEAEHVGYGMV-L 361 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML----WRKNSELLDFDFCKVKE--- 444 DG P K R G ++L ++DE + + + L + S L D+ E Sbjct: 362 GPDGRPFKT--REGGTVSLSDLLDEAETHAAPNIALAAIKYADLSNGLQKDYVFDAERMV 419 Query: 445 QSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 Q+ + Y+QYA+AR I R+A ++ P+ D D I E +E QL Sbjct: 420 QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMDWGRISVLDE--PAEQQLA 477 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 + L+ + ++E P+KL YLY+LA + + + P LR + ++ R Sbjct: 478 LLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYE---QCPVLR----STGEVRGSR 530 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L A ++ GL+++G+++P+ M Sbjct: 531 LALCAATRRVLGRGLDLLGIDAPDRM 556 >gi|260772372|ref|ZP_05881288.1| arginyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14] gi|260611511|gb|EEX36714.1| arginyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14] Length = 577 Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 136/591 (23%), Positives = 237/591 (40%), Gaps = 98/591 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG++P A+ ++ + +D IAG GFIN++LS ++L + Sbjct: 37 GDYQANGVMGVAKQLGMNPREFAQKVIDVLDLDGIASKTEIAGPGFINIFLSETFLAQ-Q 95 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + + ++ G N T V +++ + N MHVGH R ++GD + + F G+ V Sbjct: 96 AELALADAHLGVNKAEPQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQA--LYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 R +I D G Q L ++ QQ+ + +DL Y L +E A K + Sbjct: 155 RANHIGDWGTQFGMLIANLERVQQQSGEVSMELADLEAFYRESKTLYDEDEEFAAKARNY 214 Query: 221 LLN------FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274 ++ F E W +V +Q ++ ++ R + S R Sbjct: 215 VVKLQSGDAFCLEMWKKLVDVTMIQ---------------------NQQNYDRLNVSLSR 253 Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSDGSY 331 D + + + GI+ K K + D D Q++F G+ + + K DG + Sbjct: 254 DNVMGESMYNDMLPGIVADLKEKGIAQED-DGAQVVFLDEYKNKDGEPMGVIIQKRDGGF 312 Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINV 383 Y D+A K +YE G D ++Y + S + V++ + VS + + Sbjct: 313 LYTTTDIACAKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYIPEHVSLEHHAFGM 372 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416 +L +DG P K RAG + L ++DE Sbjct: 373 MLG------KDGRPFK--TRAGGTVRLADLLDEAQVRAAALIEAKNPDLTAEEKTSIATT 424 Query: 417 VGSDSVRFMML--WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 V +V++ L R + D+D E N Y+QYAY R SIF +A Sbjct: 425 VAMAAVKYADLSKHRTTDYIFDWDNMLAFEG---NTAPYMQYAYTRVASIFAKA-----G 476 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 + D +I E + E LI L ++ ++ +P+ + YL++LA F Sbjct: 477 ISMDELTGQIIIGEEK----EKALIAKLLQFEEAVQAVAREGQPHIMCSYLFELAGQFSS 532 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + A+N + RL+L A I GL+++G+ + M Sbjct: 533 FYE------ACPILVASNEESKQSRLKLAALTAKTIKQGLDLLGINTLERM 577 >gi|284007623|emb|CBA73252.1| arginyl-tRNA synthetase [Arsenophonus nasoniae] Length = 576 Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 149/597 (24%), Positives = 250/597 (41%), Gaps = 96/597 (16%) Query: 36 RPRDCAH-GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS 94 RP A G N M ++ +G+ P +AE ++ +K++ V IAG GFIN++L Sbjct: 29 RPSTKAQFGDYQANGVMSAAKKIGIPPRQLAEKMLPLLKLENIASKVEIAGPGFINIFLD 88 Query: 95 PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154 ++ K + + + + N + T + I++ + N MHVGH R ++GD +A + Sbjct: 89 KQWIAKQIE-LTLQHEKLAINSVTPQTII-IDYSAPNVAKQMHVGHLRSTIIGDAVARTL 146 Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214 F G++V R +I D G Q L ++ + QQ N +++ Y + A Sbjct: 147 EFLGHKVIRANHIGDWGTQFGML-IAYLEKVQQ---ENATNMALADLETFYRE------A 196 Query: 215 DKYSSELLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNIQH----DIFISEDDFH 266 K+ E NF E +VK D + M + D A N Q ++ ++EDD Sbjct: 197 KKHYDEDENFAELARNYVVKLQSGDEYCRKMWHKLVDITMAQNQQTYQRLNVTLTEDDV- 255 Query: 267 RGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323 G+ + + DI+ +L +G E S +D F++ GD + Sbjct: 256 MGESLYNNMLPDIVADLTAKGLAVE-------SDGAMVVYLDE----FKNK-DGDAMGVI 303 Query: 324 LLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI- 381 + K DG Y Y D+A K ++E D ++Y S ++ + A A+ K I Sbjct: 304 IQKKDGGYLYTTTDIACAKYRHEILHADRVLYYTDSRQHQHLMQ----AWAIVRKAGYIP 359 Query: 382 NVLLCEL----VRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416 + + E + L +DG P K RAG I L ++DE Sbjct: 360 DTMSLEHHMFGMMLGKDGKPFK--TRAGGTIRLADLLDEAIERAAHLIRQKNSAMPEKEL 417 Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 VG +V++ L + + FD+ + + N Y+QYAY R SIF++AK Sbjct: 418 QSIIQAVGIGAVKYADLSKNRTTDYIFDWDNMLA-FEGNTAPYMQYAYTRVASIFKRAK- 475 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE--PYKLAFYLYDL 528 + P + + E L + L ++ I T+A+E P+ + YLYDL Sbjct: 476 --------INPATLTAPVILANEYEQVLAIRLLQFEETI--LTVAREGLPHIMCSYLYDL 525 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A +F + H + A N RL+L + GL+ +G+E+ M Sbjct: 526 AGLFSSFYEH------CPILNAENDASKQSRLKLALLTQKTLKIGLDTLGIETVERM 576 >gi|156552067|ref|XP_001604592.1| PREDICTED: similar to arginyl-tRNA synthetase [Nasonia vitripennis] Length = 670 Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 144/612 (23%), Positives = 262/612 (42%), Gaps = 107/612 (17%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLG-------LDPLTIAELIVARIKIDPDVDSVFIA 84 +VI + G N+A+ L + LG + P IA+ I+ ++ P V+ + +A Sbjct: 108 VVISSSNNPKFGDYQCNSALPLCKLLGSASQGKKVSPREIADKIILKVASSPLVEKLEVA 167 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 G GFIN+YL + + IL++I+ G ++ K ++ ++F S N MHVGH R Sbjct: 168 GAGFINIYLKREFGQAILANILKHGKVLSPPVVQK-RRILVDFSSPNVAKEMHVGHLRST 226 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204 ++GD++A L+ F G++V R +I D G Q L + + N ++ P P Sbjct: 227 IIGDSIARLLEFLGHDVLRINHIGDWGTQFGMLIAHL----EDKFPNYTTESP----PIS 278 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYS-----VQA---MMKIIRDDLKALNIQH 256 L+ KE ++ E F + + +VK + +QA + + R + +++ + Sbjct: 279 DLQSFYKESKVRF-DEDEEFKKRAYACVVKLQAHEPKYIQAWKLICDVSRKEFQSIYNRL 337 Query: 257 DIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313 DI + E RG+ S ++DI+ L + ++ E D RK Sbjct: 338 DIKLIE----RGESFYHSRMKDIVKELEEKNFLEE--------------DEGRK------ 373 Query: 314 TMVGDD---VDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEA 369 M G++ + ++K DG +TY +D+A K + E + +IYV+ + + + + +E+ Sbjct: 374 IMWGENREGIPLTIVKRDGGFTYDTSDMAAIKHRIVEEKAEWVIYVVDAGQATHFQIMES 433 Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPI-----KMSKRAGDFITLRHVVDEVGSDSVRF 424 A ++A+I VL C + G+ + K R+GD + L ++DE + + Sbjct: 434 CA-----RRARI-VLSCHNIDFVGFGVVLGEDKKKFKTRSGDTVKLSQLLDEGLKRAEQK 487 Query: 425 MMLWRKNSELLDFDFCKVKE----------------------------QSKENPVFYVQY 456 +M ++ L +F K KE + K N Y+ Y Sbjct: 488 LMEKERDKVLTKEEFNKAKESIAYGCIKYADLCHNRNHDYVFSFDKMTEDKGNTAVYLLY 547 Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 A R RSI R A ++ + + I E E E +L L ++P VI T Sbjct: 548 ALTRIRSIARTANVSREEMQ-EAIGKTPISLEHE---KEWKLAKVLLKFPDVILKITKDL 603 Query: 517 EPYKLAFYLYDLASVFHGHWSHG---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573 + L Y++A F + + +N V+ N M R+ L A ++ Sbjct: 604 CLHTLCELCYEIACAFTEFYDNCYCVEKNQTGEIVKVN-----MGRILLTEVTAMMLEQC 658 Query: 574 LNIIGVESPNEM 585 ++G++ +M Sbjct: 659 FALLGLKPVEKM 670 >gi|270291958|ref|ZP_06198173.1| arginine--tRNA ligase [Streptococcus sp. M143] gi|270279486|gb|EFA25328.1| arginine--tRNA ligase [Streptococcus sp. M143] Length = 562 Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 144/603 (23%), Positives = 243/603 (40%), Gaps = 116/603 (19%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E+P++ G ++ A L++ P IA I KI+ +A ++N + Sbjct: 26 LLEQPKNSDMGDIAF-PAFSLAKVERKAPQMIAAEIAE--KINSQAFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + ++ I+ G +Y + GK + I+ S N P VGH R V+GD L+ Sbjct: 83 LDKSAISGAVIKEIIEKGSDYAQQTEGKEQNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY + ++ D G Q L ++ W ++A+ N D Y + Sbjct: 143 NIFKKMGYNTIKINHLGDWGKQFGLLMVAYKKWGSKEAVEANPIDELLKLYVRI------ 196 Query: 211 KELADKYSSELLNFP---EEK--WLPIVKDYSVQA--MMKIIRDD--------LKALNIQ 255 ++E+ N P EE W ++D +A + + RD+ K LN++ Sbjct: 197 -------NAEIENDPALDEEGRLWFKKLEDGDPEATQLWQWFRDESLVEFNRIYKLLNVE 249 Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315 D E ++ D +D A Q +G+L + + D Sbjct: 250 FDSLNGEAFYN--------DKMDE-AVQILEEKGLLEESRGASIVNLD------------ 288 Query: 316 VGDDVDRP---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369 DV+ P + KSDG+ Y D+A Y Y F IY +G + S + K+L+A Sbjct: 289 ---DVELPPAMIKKSDGATLYITRDIATAIYRARTY--NFVKNIYAVGQEQSNHFKQLKA 343 Query: 370 V-----------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406 V +S +K I +LL ++ ++ + D Sbjct: 344 VLKKMGFDWSDDMIHVDFGLVTKNRQKLSTRKGNI-ILLEPTLQEAISRAKAQIEAKNPD 402 Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIF 465 V VG +V+F L DFD V + + P Y+QYAYAR +S+ Sbjct: 403 LENKEQVAQAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQSLL 460 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 R+A F N S D ++I L ++ RVI+ A++ +P +A Y Sbjct: 461 RKAD----------FQPNAQANYSLNDAESWEIIKLLQDFARVIKRASVNYDPSLIAKYA 510 Query: 526 YDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 LA F+ +++H R E+P RL L +A A ++ L ++GVE+P Sbjct: 511 ISLAQAFNKYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAP 559 Query: 583 NEM 585 +M Sbjct: 560 EKM 562 >gi|327335290|gb|EGE77000.1| arginine--tRNA ligase [Propionibacterium acnes HL097PA1] Length = 582 Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 138/566 (24%), Positives = 239/566 (42%), Gaps = 63/566 (11%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH +N A+ L++ P +A IVA++ I+ ++ IAG GFINL L L ++ Sbjct: 57 GHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCETPEIAGPGFINLRLRTDVLARVA 116 Query: 103 SSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 S +V +GI K +V I++ + N MHVGH R ++GD +++ G+ Sbjct: 117 SDLVTDPNAGIAQAE----KPERVVIDYSAPNVAKQMHVGHLRSTIIGDCFNRVLSAQGH 172 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 V + +I D G Q L + + + S + + Y + AD+ Sbjct: 173 TVIPQNHIGDWGTQFGMLIEYIVEKRMDVEDFDLSGVEQLYQDSKKTFDADPQFADRARR 232 Query: 220 EL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-- 275 + L + + L I + ++ I + A + + ++++D G+ S D Sbjct: 233 RVVKLQGGDAETLRIWR-----TLIDISLEGFNATYARLSVLLTDEDVA-GESSYNDDLP 286 Query: 276 -IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334 ++D L G E D L + G D + K DG + Y Sbjct: 287 RVVDELVADGLAVE----------------DNGALCV--FVEGQDAPMIVRKRDGGFGYD 328 Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRL 391 A DLA + + + D +IYV S + + L VA A + + +V L Sbjct: 329 ATDLAAIRRRVGKLKADRIIYVTDVRQSYHFEVLFQVARMAGFLPDDVEAEHVGYGMV-L 387 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML----WRKNSELLDFDFCKVKE--- 444 DG P K R G ++L ++DE + + + L + S L D+ E Sbjct: 388 GPDGRPFKT--REGGTVSLSDLLDEAETHAAPNIALAAIKYADLSNGLQKDYVFDAERMV 445 Query: 445 QSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 Q+ + Y+QYA+AR I R+A ++ P+ D D I E +E QL Sbjct: 446 QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMDWGRISVLDE--PAEQQLA 503 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 + L+ + ++E P+KL YLY+LA + + + P LR + ++ R Sbjct: 504 LLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYE---QCPVLR----STGEVRGSR 556 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L A ++ GL+++G+++P+ M Sbjct: 557 LALCAATRRVLGRGLDLLGIDAPDRM 582 >gi|301766472|ref|XP_002918656.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Ailuropoda melanoleuca] Length = 660 Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 137/584 (23%), Positives = 254/584 (43%), Gaps = 75/584 (12%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S+ L ++P IAE I + + V+ V IAG GFIN++L + Sbjct: 111 GDYQCNSAMGISQILKTKEQKVNPREIAENITRHLPDNECVEKVEIAGPGFINVHLRKDF 170 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + L++++V+G++ +G+ KV ++F S N MHVGH R ++G+++ L F+ Sbjct: 171 VSQQLTNLLVNGVKLP--ALGEYKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFA 228 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215 GY+V R ++ D G Q L + ++ L + DL + +Y + +E Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEDFK 287 Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SP 272 K + + + + K I+K + + + + R + + DI + E RG+ Sbjct: 288 KRAYQCVVLLQSKNPDIIKAWKL--ICDVSRQEFNRIYGALDISLIE----RGESFYQDR 341 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + DI++ +G+V + D D ++++F + G + ++KSDG YT Sbjct: 342 MNDIVEEFEDKGFV--------------QVD-DGRKIVF---VPGCSIPLTIVKSDGGYT 383 Query: 333 YFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVA-------------------A 372 Y +DLA K + +E D +IYV+ S S + + + A Sbjct: 384 YDTSDLAALKQRLFEEKADMIIYVVDSGQSVHFQTIFGAAQMAGWYDPKVTRVSHAGFGV 443 Query: 373 AVSEKKAQINVLLCELVR---LYRDGMPIKMSK---RAGDFI----TLRHVVDEVGSDSV 422 + E K + E VR L +G+ M K + D + L+ V + Sbjct: 444 VLGEDKKKFKTRSGETVRLIDLLEEGLKRSMDKLKEKERDKVLTAEELKAAQTSVAYGCI 503 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 ++ L F F K+ + + N Y+ YA+ R RSI R A ++D + + Sbjct: 504 KYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEGMLQK 557 Query: 483 NVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + D E +L + +P +++ + L Y+Y+LA+ F + Sbjct: 558 AAQETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYC 617 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R K+ M R+ L AVA+++ +I+G++ M Sbjct: 618 VEKDRQT-GQVLKVNMWRMLLCEAVAAVMAKAFDILGIKPVQRM 660 >gi|281338995|gb|EFB14579.1| hypothetical protein PANDA_007149 [Ailuropoda melanoleuca] Length = 645 Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 137/584 (23%), Positives = 254/584 (43%), Gaps = 75/584 (12%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S+ L ++P IAE I + + V+ V IAG GFIN++L + Sbjct: 96 GDYQCNSAMGISQILKTKEQKVNPREIAENITRHLPDNECVEKVEIAGPGFINVHLRKDF 155 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + L++++V+G++ +G+ KV ++F S N MHVGH R ++G+++ L F+ Sbjct: 156 VSQQLTNLLVNGVKLP--ALGEYKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFA 213 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215 GY+V R ++ D G Q L + ++ L + DL + +Y + +E Sbjct: 214 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEDFK 272 Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SP 272 K + + + + K I+K + + + + R + + DI + E RG+ Sbjct: 273 KRAYQCVVLLQSKNPDIIKAWKL--ICDVSRQEFNRIYGALDISLIE----RGESFYQDR 326 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + DI++ +G+V + D D ++++F + G + ++KSDG YT Sbjct: 327 MNDIVEEFEDKGFV--------------QVD-DGRKIVF---VPGCSIPLTIVKSDGGYT 368 Query: 333 YFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVA-------------------A 372 Y +DLA K + +E D +IYV+ S S + + + A Sbjct: 369 YDTSDLAALKQRLFEEKADMIIYVVDSGQSVHFQTIFGAAQMAGWYDPKVTRVSHAGFGV 428 Query: 373 AVSEKKAQINVLLCELVR---LYRDGMPIKMSK---RAGDFI----TLRHVVDEVGSDSV 422 + E K + E VR L +G+ M K + D + L+ V + Sbjct: 429 VLGEDKKKFKTRSGETVRLIDLLEEGLKRSMDKLKEKERDKVLTAEELKAAQTSVAYGCI 488 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 ++ L F F K+ + + N Y+ YA+ R RSI R A ++D + + Sbjct: 489 KYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEGMLQK 542 Query: 483 NVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + D E +L + +P +++ + L Y+Y+LA+ F + Sbjct: 543 AAQETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYC 602 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R K+ M R+ L AVA+++ +I+G++ M Sbjct: 603 VEKDRQT-GQVLKVNMWRMLLCEAVAAVMAKAFDILGIKPVQRM 645 >gi|294139047|ref|YP_003555025.1| arginyl-tRNA synthetase [Shewanella violacea DSS12] gi|293325516|dbj|BAJ00247.1| arginyl-tRNA synthetase [Shewanella violacea DSS12] Length = 581 Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 144/616 (23%), Positives = 253/616 (41%), Gaps = 124/616 (20%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 RI ++R +D HG +TN AM+L++ +P IA+LI+ + D V V IAG GFIN Sbjct: 29 RIQVDRTKDKTHGDFATNLAMMLTKTARKNPREIAQLIIDSLPQDSQVAKVEIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 ++ + L L + + G +L + T V +++ S N MHVGH R ++GD++ Sbjct: 89 FFIDENALANQLMA-ALKDDHLGISLPEQQTIV-VDYSSPNLAKEMHVGHLRSTIIGDSV 146 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + F G++V R+ ++ D G Q L Y + L + + + Sbjct: 147 VRALEFQGHKVIRQNHVGDWGTQFGML-----LAYMEELRAKNGEQAQ------------ 189 Query: 211 KELADK---YSSELLNFPEEKWLPIVKDYSVQAMM-------KIIRD--DLKALNIQHDI 258 EL+D Y + + F E + + V ++ K+ R+ D+ +LN HD+ Sbjct: 190 MELSDLETFYRAAKVRFDESEEFAVRARKLVVSLQSGDEYCNKLWREFNDI-SLNHCHDV 248 Query: 259 F------ISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 + ++ +D RG+ + + +++ L QG + E +K + + K+ Sbjct: 249 YARLGVSLTREDV-RGESAYNADLVEVVKELDTQGLLSE----SNGAKVVFQDEFKNKE- 302 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLA---------------YF------------- 341 GD + + K+DG Y Y +D+A YF Sbjct: 303 -------GDPLPVIIQKADGGYLYATSDMAAMSYRSKVLNADRVLYFVDLRQALHFQQVF 355 Query: 342 ----KCKYER--------GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 K + R GF M G+D + R V V + A+ ++ ELV Sbjct: 356 KLARKANFVRPELSLEHMGFGTM---NGADGRPFKTRSGGVVKLV-DLLAEADIRALELV 411 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 R M D L + VG SV++ L + + F F ++ + N Sbjct: 412 RSKNPDM---------DEAELEKIAKVVGISSVKYADLSKNRTSDYIFSFEQML-SFEGN 461 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 Y+ YAY R IF++A+DI DL ++ + + E L LA++ V+ Sbjct: 462 TAPYLLYAYTRVIGIFKRAEDI------DLSQAKILLEHDK----EKNLGNKLAQFGEVL 511 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 +P+ + YL++LA F + + A + RL + A Sbjct: 512 SRMVSKGQPHAMCAYLFELAGAFSSFYEA------CPVLAAETEEQKKSRLLIAKLTAKT 565 Query: 570 INSGLNIIGVESPNEM 585 + GL+++G+E+ + M Sbjct: 566 LKQGLDLLGIETLDRM 581 >gi|50843566|ref|YP_056793.1| arginyl-tRNA synthetase [Propionibacterium acnes KPA171202] gi|81611018|sp|Q6A5X8|SYR_PROAC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|50841168|gb|AAT83835.1| arginyl-tRNA synthetase [Propionibacterium acnes KPA171202] Length = 556 Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 138/566 (24%), Positives = 238/566 (42%), Gaps = 63/566 (11%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH +N A+ L++ P +A IVA++ I+ ++ IAG GFINL L L ++ Sbjct: 31 GHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCETPEIAGPGFINLRLRADVLARVA 90 Query: 103 SSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 S V +GI K +V I++ + N MHVGH R ++GD +++ G+ Sbjct: 91 SDFVTDPNAGIAQAE----KPERVVIDYSAPNVAKQMHVGHLRSTIIGDCFNRVLSAQGH 146 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 V + +I D G Q L + + + S + + Y + AD+ Sbjct: 147 TVIPQNHIGDWGTQFGMLIEYIVEKRMDVEDFDLSGVEQLYQDSKKTFDADPQFADRARR 206 Query: 220 EL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-- 275 + L + + L I + ++ I + A + + ++++D G+ S D Sbjct: 207 RVVKLQGGDAETLRIWR-----TLIDISLEGFNATYSRLSVLLTDEDVA-GESSYNDDLP 260 Query: 276 -IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334 ++D L G E D L + G D + K DG + Y Sbjct: 261 RVVDELVADGLAVE----------------DNGALCV--FVEGQDAPMIVRKRDGGFGYD 302 Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRL 391 A DLA + + + D +IYV S + + L VA A + + +V L Sbjct: 303 ATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAGFLPDDVEAEHVGYGMV-L 361 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML----WRKNSELLDFDFCKVKE--- 444 DG P K R G ++L ++DE + + + L + S L D+ E Sbjct: 362 GPDGRPFKT--REGGTVSLSDLLDEAETHAAPNIALAAIKYADLSNGLQKDYVFDAERMV 419 Query: 445 QSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 Q+ + Y+QYA+AR I R+A ++ P+ D D I E +E QL Sbjct: 420 QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMDWGRISVLDE--PAEQQLA 477 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 + L+ + ++E P+KL YLY+LA + + + P LR + ++ R Sbjct: 478 LLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYE---QCPVLR----STGEVRGSR 530 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L A ++ GL+++G+++P+ M Sbjct: 531 LALCAATRRVLGRGLDLLGIDAPDRM 556 >gi|332709098|ref|ZP_08429067.1| arginyl-tRNA synthetase [Lyngbya majuscula 3L] gi|332352149|gb|EGJ31720.1| arginyl-tRNA synthetase [Lyngbya majuscula 3L] Length = 585 Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 150/589 (25%), Positives = 239/589 (40%), Gaps = 89/589 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G +N A+ LS+ L P IAE ++ I + S IAG GFINL L P+YL + L Sbjct: 40 GDYQSNVALALSKRLKQPPRAIAESLLQYIDVAEICQSPTIAGPGFINLSLKPAYLEERL 99 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 I G + +V ++F S N MHVGH R ++GD++A ++ F G V Sbjct: 100 REIHTDP-RLGVAVAPAPRQVIVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFRGQNVL 158 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222 R ++ D G Q L + Y AL D+ L G +Y + + AD+ Sbjct: 159 RLNHVGDWGTQFGMLITYLREAYPSALTTADA-LDLGDLVTLYRQAKQRFDADE------ 211 Query: 223 NFPEEKWLPIVKDYS--------VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---S 271 F E L +VK S Q + R + + + DI ++E RG+ + Sbjct: 212 EFREASRLEVVKLQSGAADSRRAWQLLCDQSRREFQIIYDLLDIQLTE----RGESFYNT 267 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDG 329 + +++D L + G + E D K + D PL+ KSDG Sbjct: 268 LLPEVVDYLDKSGLLVE--------------DSGAKCVFLEGFTNKDGEPLPLIVQKSDG 313 Query: 330 SYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 Y Y DLA + + E+ +IYV S + + ++ VA + V+ Sbjct: 314 GYNYATTDLAALRYRTEQDQAQRIIYVTDSGQANHFAQVFQVARRTGILPENVEVVHVPF 373 Query: 389 -VRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------------- 416 + L DG K+ R+G+ + LR ++DE Sbjct: 374 GLVLGEDGK--KLKTRSGETVRLRDLLDEAIARSGADLESRLKQEGREETEEFKEHVAKV 431 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG +V++ L + + F F K+ + N Y+ YAY R + I R+ + F L Sbjct: 432 VGMSAVKYADLSQNRTSNYIFSFDKMLA-LQGNTAPYMLYAYVRIQGISRKGEIDFEQLG 490 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 D ++ QE +EL L L + V+ P +L YL++L+ F+ + Sbjct: 491 TDA---KILLQED----AELVLGKKLLQLSEVLGEVEKELMPNRLCQYLFELSQKFNQFY 543 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P L+ A K T RL L A + GL ++G++ M Sbjct: 544 D---QCPVLK---AEEPKRT-SRLLLCDLTARTLKLGLYLLGIQVLERM 585 >gi|314924377|gb|EFS88208.1| arginyl-tRNA synthetase [Propionibacterium acnes HL001PA1] Length = 582 Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 138/566 (24%), Positives = 238/566 (42%), Gaps = 63/566 (11%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH +N A+ L++ P +A IVA++ I+ ++ IAG GFINL L L ++ Sbjct: 57 GHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCETPEIAGPGFINLRLRADVLARVA 116 Query: 103 SSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 S V +GI K +V I++ + N MHVGH R ++GD +++ G+ Sbjct: 117 SDFVTDPNAGIAQAE----KPERVVIDYSAPNVAKQMHVGHLRSTIIGDCFNRVLSAQGH 172 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 V + +I D G Q L + + + S + + Y + AD+ Sbjct: 173 TVIPQNHIGDWGTQFGMLIEYIVEKRMDVEDFDLSGVEQLYQDSKKTFDADPQFADRARR 232 Query: 220 EL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-- 275 + L + + L I + ++ I + A + + ++++D G+ S D Sbjct: 233 RVVKLQGGDAETLRIWR-----TLIDISLEGFNATYSRLSVLLTDEDVA-GESSYNDDLP 286 Query: 276 -IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334 ++D L G E D L + G D + K DG + Y Sbjct: 287 RVVDELVADGLAVE----------------DNGALCV--FVEGQDAPMIVRKRDGGFGYD 328 Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRL 391 A DLA + + + D +IYV S + + L VA A + + +V L Sbjct: 329 ATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAGFLPDDVEAEHVGYGMV-L 387 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML----WRKNSELLDFDFCKVKE--- 444 DG P K R G ++L ++DE + + + L + S L D+ E Sbjct: 388 GPDGRPFKT--REGGTVSLSDLLDEAETHAAPNIALAAIKYADLSNGLQKDYVFDAERMV 445 Query: 445 QSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 Q+ + Y+QYA+AR I R+A ++ P+ D D I E +E QL Sbjct: 446 QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMDWGRISVLDE--PAEQQLA 503 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 + L+ + ++E P+KL YLY+LA + + + P LR + ++ R Sbjct: 504 LLLSRFGEIVEVVATDLAPHKLCTYLYELAGAYSVFYE---QCPVLR----STGEVRGSR 556 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L A ++ GL+++G+++P+ M Sbjct: 557 LALCAATRRVLGRGLDLLGIDAPDRM 582 >gi|319897254|ref|YP_004135449.1| arginyl-tRNA synthetase [Haemophilus influenzae F3031] gi|317432758|emb|CBY81123.1| arginyl-tRNA synthetase [Haemophilus influenzae F3031] Length = 577 Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 139/594 (23%), Positives = 238/594 (40%), Gaps = 104/594 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LGL+P A+ ++ +++ + + IAG GFIN++L+P++L + Sbjct: 37 GDYQANGIMAAAKKLGLNPREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 S+ +S G K T V I++ S N MHVGH R ++GD +A + F G+ V Sbjct: 97 SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220 R ++ D G Q L + Q + ++ +L E +Y A K+ E Sbjct: 155 RANHVGDWGTQFGMLI--AYLEKMQNEHASEMELQDLEAFY----------REAKKHYDE 202 Query: 221 LLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNIQH-----DIFISEDDFHRGDP- 270 F E+ +VK D + M K + D N QH ++ ++E D G+ Sbjct: 203 DEIFAEKARNYVVKLQSGDEYCRTMWKRLVDITMQQN-QHNYNRLNVTLTEKDV-MGESL 260 Query: 271 -SP-IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 +P + I+++L +QG E G L + K GD + + K Sbjct: 261 YNPMLPSIVEDLKKQGLAVENDGALVVYLDEFKNKD--------------GDPMGVIVQK 306 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY--------VKRLEAVAAAVSEKK 378 DG + Y D+A K +YE N V ++ V + S + Sbjct: 307 KDGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEH 366 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 ++L +DG P K R G + L ++DE Sbjct: 367 KNFGMMLG------KDGKPFKT--RTGGTVKLADLLDEAIERSTVLINEKNTNLSNDEKE 418 Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VG +V++ L + + FD+ + + N Y+QYAY R RSIF + Sbjct: 419 AVIKAVGIGAVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNKT--- 474 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 D + P + D E L + L ++ ++ P+ L YLY+LA + Sbjct: 475 ----DINSTALLAAPLTIK-DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYELAGI 529 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + H + A + + + RL+L + GL ++G+++ +M Sbjct: 530 FSSFYEH------CPILNAEDESIKLSRLKLALLTEKTLKQGLTLLGIKTVEKM 577 >gi|314967238|gb|EFT11337.1| arginyl-tRNA synthetase [Propionibacterium acnes HL082PA2] gi|314981625|gb|EFT25718.1| arginyl-tRNA synthetase [Propionibacterium acnes HL110PA3] gi|315092264|gb|EFT64240.1| arginyl-tRNA synthetase [Propionibacterium acnes HL110PA4] gi|315094840|gb|EFT66816.1| arginyl-tRNA synthetase [Propionibacterium acnes HL060PA1] gi|327328683|gb|EGE70443.1| arginine--tRNA ligase [Propionibacterium acnes HL103PA1] Length = 582 Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 138/566 (24%), Positives = 238/566 (42%), Gaps = 63/566 (11%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH +N A+ L++ P +A IVA++ I+ ++ IAG GFINL L L ++ Sbjct: 57 GHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCETPEIAGPGFINLRLRADVLARVA 116 Query: 103 SSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 S V +GI K +V I++ + N MHVGH R ++GD +++ G+ Sbjct: 117 SDFVTDPNAGIAQAE----KPERVVIDYSAPNVAKQMHVGHLRSTIIGDCFNRVLSAQGH 172 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 V + +I D G Q L + + + S + + Y + AD+ Sbjct: 173 TVIPQNHIGDWGTQFGMLIEYIVEKRMDVEDFDLSGVEQLYQDSKKTFDADPQFADRARR 232 Query: 220 EL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-- 275 + L + + L I + ++ I + A + + ++++D G+ S D Sbjct: 233 RVVKLQGGDAETLRIWR-----TLIDISLEGFNATYSRLSVLLTDEDVA-GESSYNDDLP 286 Query: 276 -IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334 ++D L G E D L + G D + K DG + Y Sbjct: 287 RVVDELVADGLAVE----------------DNGALCV--FVEGQDAPMIVRKRDGGFGYD 328 Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRL 391 A DLA + + + D +IYV S + + L VA A + + +V L Sbjct: 329 ATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAGFLPDDVEAEHVGYGMV-L 387 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML----WRKNSELLDFDFCKVKE--- 444 DG P K R G ++L ++DE + + + L + S L D+ E Sbjct: 388 GPDGRPFKT--REGGTVSLSDLLDEAETHAAPNIALAAIKYADLSNGLQKDYVFDAERMV 445 Query: 445 QSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 Q+ + Y+QYA+AR I R+A ++ P+ D D I E +E QL Sbjct: 446 QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMDWGRISVLDE--PAEQQLA 503 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 + L+ + ++E P+KL YLY+LA + + + P LR + ++ R Sbjct: 504 LLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYE---QCPVLR----STGEVRGSR 556 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L A ++ GL+++G+++P+ M Sbjct: 557 LALCAATRRVLGRGLDLLGIDAPDRM 582 >gi|315104702|gb|EFT76678.1| arginyl-tRNA synthetase [Propionibacterium acnes HL050PA2] gi|315107765|gb|EFT79741.1| arginyl-tRNA synthetase [Propionibacterium acnes HL030PA1] Length = 582 Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 138/566 (24%), Positives = 238/566 (42%), Gaps = 63/566 (11%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH +N A+ L++ P +A IVA++ I+ ++ IAG GFINL L L ++ Sbjct: 57 GHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCETPEIAGPGFINLRLRADVLARVA 116 Query: 103 SSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 S V +GI K +V I++ + N MHVGH R ++GD +++ G+ Sbjct: 117 SDFVTDPNAGIAQAE----KPERVVIDYSAPNVAKQMHVGHLRSTIIGDCFNRVLSAQGH 172 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 V + +I D G Q L + + + S + + Y + AD+ Sbjct: 173 TVIPQNHIGDWGTQFGMLIEYIVEKRMDVEDFDLSGVEQLYQDSKKTFDADPQFADRARR 232 Query: 220 EL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-- 275 + L + + L I + ++ I + A + + ++++D G+ S D Sbjct: 233 RVVKLQGGDAETLRIWR-----TLIDISLEGFNATYSRLSVLLTDEDVA-GESSYNDDLP 286 Query: 276 -IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334 ++D L G E D L + G D + K DG + Y Sbjct: 287 RVVDELVADGLAVE----------------DNGALCV--FVEGQDAPMIVRKRDGGFGYD 328 Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRL 391 A DLA + + + D +IYV S + + L VA A + + +V L Sbjct: 329 ATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAGFLPDDVEAEHVGYGMV-L 387 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML----WRKNSELLDFDFCKVKE--- 444 DG P K R G ++L ++DE + + + L + S L D+ E Sbjct: 388 GPDGRPFKT--REGGTVSLSDLLDEAETHAAPNIALAAIKYADLSNGLQKDYVFDAERMV 445 Query: 445 QSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 Q+ + Y+QYA+AR I R+A ++ P+ D D I E +E QL Sbjct: 446 QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMDWGRISVLDE--PAEQQLA 503 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 + L+ + ++E P+KL YLY+LA + + + P LR + ++ R Sbjct: 504 LLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYE---QCPVLR----STGEVRGSR 556 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L A ++ GL+++G+++P+ M Sbjct: 557 LALCAATRRVLGRGLDLLGIDAPDRM 582 >gi|163791004|ref|ZP_02185426.1| arginyl-tRNA synthetase [Carnobacterium sp. AT7] gi|159873743|gb|EDP67825.1| arginyl-tRNA synthetase [Carnobacterium sp. AT7] Length = 564 Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 148/604 (24%), Positives = 267/604 (44%), Gaps = 107/604 (17%) Query: 29 LDRIV--IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK 86 +D+IV +E+P+ HG ++ A L++ P IA + + P V+ + + G Sbjct: 21 IDQIVNLLEKPKSVEHGDIAF-PAFALAKTYRKAPQQIA-IELGETVNSPIVEKIEVVGP 78 Query: 87 GFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 ++N +L+ + +L ++ G YG + IGK V I+ S N P+ +GH R V Sbjct: 79 -YLNFFLNKQEVSAAVLKEVLEQGAHYGDSKIGKNRNVPIDMSSPNIAKPISMGHLRSTV 137 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGV 204 +G+ LA+++ G+ + ++ D G Q L + W ++A+ N P G + Sbjct: 138 IGNALANILTKVGFNPIKINHLGDWGTQFGKLIVGYKLWGSEEAVKEN----PIGELLRL 193 Query: 205 YLKHVGKELADKYSSELLNFPE-----EKWLPIVK--DYSVQAMMKIIRDD-LKALNIQH 256 Y+ K+ E PE +W ++ D Q + K R++ LK N + Sbjct: 194 YV---------KFHEEAEEKPELDDNAREWFKKLEDGDEEAQNLWKWFREESLKEFNHVY 244 Query: 257 D-IFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312 D + I+ D F+ G+ +++++D L + +L T D+++ L Sbjct: 245 DRLNITFDSFN-GEAFYNDKMQEVVDLLEEK-----NVLTVNDGATL--VDLEKYNL--- 293 Query: 313 STMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRL 367 P L K+DG+ Y DLA Y K Y+ F +Y +G++ S + K+L Sbjct: 294 ---------NPALIKKTDGATLYITRDLAAAIYRKRTYD--FALSLYAVGNEQSNHFKQL 342 Query: 368 EAV-----------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404 +AV +S +K +I VLL E++ ++ ++ Sbjct: 343 KAVLKEMGFDWADDMYHVPFGLITQGGKKLSTRKGKI-VLLEEVLDDAVASALEQIEEKN 401 Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARC 461 + + D+VG +V F L KN L +FDF V+ + + P YVQY AR Sbjct: 402 SELPNKEIIADQVGIGAVIFHDL--KNDRLNNFDFTIEEVVRFEGETGP--YVQYTRARA 457 Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 SI R++ D + +P + D ++I L YP ++ A EP + Sbjct: 458 MSIIRKSGLAGIDTTVN-YPLD--------DAYSWEIIKLLQNYPADVQRAYEKFEPSVI 508 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 A + LA F+ ++++ + V A++ + RL LV +VA+I+ L ++GV++ Sbjct: 509 AKHAIHLAQAFNKYYANSK-------VLADDAQRP-ARLALVQSVATILKEDLRLLGVQA 560 Query: 582 PNEM 585 P++M Sbjct: 561 PDQM 564 >gi|300717101|ref|YP_003741904.1| Arginyl-tRNA synthetase [Erwinia billingiae Eb661] gi|299062937|emb|CAX60057.1| Arginyl-tRNA synthetase [Erwinia billingiae Eb661] Length = 576 Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 137/596 (22%), Positives = 231/596 (38%), Gaps = 109/596 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + + V IAG GFINL+L +L + Sbjct: 37 GDYQANGIMAVAKKLGMAPRQLAEEVLKHLDLTGIASKVEIAGPGFINLFLDKQWLSAQV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + V + G + T V I++ + N MHVGH R ++GD + F G+ V Sbjct: 97 DA-VTAAPRLGVAPVAPQTVV-IDYSAPNVAKEMHVGHVRSTIIGDAAVRTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204 R ++ D G Q L L VF+R + Y+ D E G Sbjct: 155 RANHVGDWGTQFGMLIAFLEKQQNEHHEEHALADLEVFYREAKRTYDEDPAFAE-RARGY 213 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 +K G D+Y + W +V D ++ A +II D + + D+ + E Sbjct: 214 VVKLQG---GDEYCRTM-------WKKLV-DITM-AQNQIIYDRMNVTLSRKDV-MGESL 260 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 ++ P + D+ +G+ + T D + + GD + + Sbjct: 261 YNDMLPGIVADL---------TAKGLAVQSEGATVVFLDEYKNK-------DGDPMGVII 304 Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSE 376 K DG Y Y D+A K +YE D ++Y + + V++ V +V Sbjct: 305 KKKDGGYLYTTTDIACAKYRYETLKADRVLYYIDCRQHQHLMQAWTIVRKAGYVPESVPL 364 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416 + ++L +DG P K RAG I L ++DE Sbjct: 365 EHHAFGMMLG------KDGKPFKT--RAGGTIKLSDLLDEAVERATKLVGEKNPDMPADE 416 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 VG ++++ L + + FD+ + + N Y+QYAY R S+FR+A Sbjct: 417 LKALANSVGIGAIKYADLSKSRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA- 474 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 + V + E L V L ++ I P+ + YLYDLA Sbjct: 475 --------GIDETGVTGNAQIVEDREAALAVRLLQFEETITQVARDGTPHVMCAYLYDLA 526 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +F G + H + A++ RL+L A + GL+ +G+++ M Sbjct: 527 GLFSGFYEH------CPILTADDEATKQSRLKLALLTAKTLKQGLDTLGIDTVERM 576 >gi|306828746|ref|ZP_07461938.1| arginine--tRNA ligase [Streptococcus mitis ATCC 6249] gi|304428924|gb|EFM32012.1| arginine--tRNA ligase [Streptococcus mitis ATCC 6249] Length = 562 Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 147/597 (24%), Positives = 248/597 (41%), Gaps = 104/597 (17%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E+P++ G ++ A L++ P IA I A KI+ +A ++N + Sbjct: 26 LLEQPKNSDMGDIAF-PAFSLAKVERKAPQVIAADIAA--KINSQAFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + ++ I+ G +Y + G+ + I+ S N P VGH R V+GD L+ Sbjct: 83 LDKSAISGAVIKEIIKKGADYAQQTEGQEQNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY+ + ++ D G Q L ++ W ++A+ N D LK Sbjct: 143 NIFKKMGYKTIKINHLGDWGKQFGLLMVAYKKWGSKEAIEANPID--------ELLKLYV 194 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 + A+ + + L+ W ++D +A + + RD+ L N + + E D Sbjct: 195 RINAEIETDKALDDEGRLWFKKLEDGDPEATQLWQWFRDESLVEFNRIYKLLGVEFDSLN 254 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---L 324 G+ + D +D A Q +G+L ++ C ++ DD D P + Sbjct: 255 GE-AFYNDKMDE-AVQILEEKGLL----EESQGACIVNL-----------DDFDLPPAMI 297 Query: 325 LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV----AAAVSEK 377 KSDG+ Y D+A Y Y F IY +G + S + K+L+AV A S+ Sbjct: 298 KKSDGATLYITRDIATAIYRARTY--NFVKNIYAVGQEQSNHFKQLKAVLKKMGFAWSDD 355 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416 ++ L R K+S R G+ I L + E Sbjct: 356 MVHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLQEAITRAKAQIEAKNPDLENKDQ 408 Query: 417 ----VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VG +V+F L DFD V + + P Y+QYAYAR +S+ R+A Sbjct: 409 IAQAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQSLLRKAD-- 464 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 F N S D+ ++I L ++ RVI+ A+ +P +A Y LA Sbjct: 465 --------FQPNAQESYSLNDSESWEIIKLLQDFARVIKRASDNYDPSLIAKYAISLAQA 516 Query: 532 FHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ +++H R E+P RL L +A A ++ L ++GVE+P +M Sbjct: 517 FNKYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 562 >gi|260901277|ref|ZP_05909672.1| arginine--tRNA ligase [Vibrio parahaemolyticus AQ4037] gi|308109838|gb|EFO47378.1| arginine--tRNA ligase [Vibrio parahaemolyticus AQ4037] Length = 577 Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 137/601 (22%), Positives = 236/601 (39%), Gaps = 118/601 (19%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG +P A+ ++ + +D IAG GFIN++LS +L K Sbjct: 37 GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96 Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 + + G+ + + ++ + N MHVGH R ++GD + + F G+ Sbjct: 97 EAALADSRLGV-----AADEAQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGH 151 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYY-PGVYLKHVGKELADK 216 +V R +I D G Q L ++ R QQ +L EG+Y L +E A K Sbjct: 152 KVIRANHIGDWGTQFGML-IANLERVQQESGEVSMELADLEGFYRESKKLYDEDEEFAVK 210 Query: 217 YSSELL------NFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNIQHDIFISED 263 + ++ F E W +V +Q + + RDD+ ++ +D+ Sbjct: 211 ARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESMYNDM----- 265 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDV 320 + I+ +L QG E D Q++F G+ + Sbjct: 266 ---------LPKIVADLKAQGLAVED---------------DGAQVVFLEEFKNKDGEAM 301 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAA 372 + K DG + Y D+A K +YE G D ++Y + S + V++ V Sbjct: 302 GVIVQKRDGGFLYTTTDIACAKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYVPE 361 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 +VS + ++L +DG P K RAG + L ++DE + + ++ KN Sbjct: 362 SVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRAAQ--LIESKNP 411 Query: 433 EL-----------LDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRSI 464 EL + K + SK N Y+QYAY R SI Sbjct: 412 ELDAEEKEKISKTVAMAAVKYSDLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASI 471 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 F +A +L D+ D E LI L ++ +++ +P+ + Y Sbjct: 472 FAKAGVAMDELQGDI---------QITDEKEKALIAKLLQFEEAVQSVAREGQPHIMCSY 522 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 L++LA F + + A + + RL+L A I GL+++G+E+ Sbjct: 523 LFELAGQFSSFYEA------CPILVAEDEAVKQSRLKLAALTAKTIKQGLSLLGIETLER 576 Query: 585 M 585 M Sbjct: 577 M 577 >gi|261343877|ref|ZP_05971522.1| arginine--tRNA ligase [Providencia rustigianii DSM 4541] gi|282568263|gb|EFB73798.1| arginine--tRNA ligase [Providencia rustigianii DSM 4541] Length = 576 Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 132/582 (22%), Positives = 233/582 (40%), Gaps = 81/582 (13%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ +G+ P +AE IV+ + ++ V IAG GFIN+++ P+++ Sbjct: 37 GDYQANGVMGAAKKMGMPPRQLAEQIVSHLDLEGIATKVEIAGPGFINIFIDPTWVATYA 96 Query: 103 SSIVVSGIEYGRNLIG----KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158 + S + +G K + I++ + N MHVGH R ++GD A F G Sbjct: 97 EQALTS------DRLGIAPVKPETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEFLG 150 Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNND-SDLPEGYYPGVYLKHVGKELADKY 217 ++V R ++ D G Q L Y + + N D SD+ Y + A K+ Sbjct: 151 HKVIRANHVGDWGTQFGMLI-----AYLEKVQNEDASDMALADLEAFYRE------AKKH 199 Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277 E +F +VK S + + L + +Q + ++ +HR + + D + Sbjct: 200 YDEDEDFAVRARGYVVKLQSGDEYCRKMWRKLVDITMQQN----QETYHRLNVTLTEDDV 255 Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYF 334 + + GI+ K+K + + ++F G+ + + K DG Y Y Sbjct: 256 MGESLYNSMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIVQKKDGGYLYT 314 Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVR 390 D+A K +YE D +Y + S ++ + + A + E A + + + Sbjct: 315 TTDIACAKYRYETLHADRSLYYIDSRQHQHLMQAWTIVRKAGYIPESMALEHHMFGMM-- 372 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVR 423 L +DG P K R+G + L ++DE VG +V+ Sbjct: 373 LGKDGKPFK--TRSGGTVRLSDLLDEAVERAQTLIREKNPDMPEDELLNLANVVGIGAVK 430 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + L + + FD+ + + N Y+QYAY R SIF++A DL + Sbjct: 431 YADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVASIFKKANITEADLTLPIVLEA 489 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 E+ L L ++ I P+ + YLYDLA +F + H Sbjct: 490 ---------PHEIVLATRLMQFEETILTVARDGTPHVMCAYLYDLAGLFSSFYEH----- 535 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A+N RL+L + GL+ +G+E+ M Sbjct: 536 -CPILSADNDAQRQSRLKLALLTQKTLKVGLDTLGIETVERM 576 >gi|149191128|ref|ZP_01869387.1| arginyl-tRNA synthetase [Vibrio shilonii AK1] gi|148835056|gb|EDL52034.1| arginyl-tRNA synthetase [Vibrio shilonii AK1] Length = 577 Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 135/606 (22%), Positives = 234/606 (38%), Gaps = 128/606 (21%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG +P A+ ++ + +D IAG GFIN++LS +L K Sbjct: 37 GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + R + + I ++ + N MHVGH R ++GD + + F G+ Sbjct: 97 DEALTDA----RLGVASQEQQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHN 152 Query: 161 VTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGYY 201 V R +I D G Q L L F+R + LY+ D++ E Sbjct: 153 VIRANHIGDWGTQFGMLIANLERVQQESGEVSMELSDLEAFYRESKKLYDEDAEFAE-RA 211 Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNI 254 G +K G D++ +E+ W +V +Q + + RDD+ ++ Sbjct: 212 RGYVVKLQG---GDEFCAEM-------WKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR-- 312 +D+ P I+ +L +G E D Q++F Sbjct: 262 YNDML----------PG----IVQDLKEKGLAVED---------------DGAQVVFLDE 292 Query: 313 -STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV 370 G+ + + K DG + Y D+A K +YE+ G D ++Y + S ++++ + Sbjct: 293 YKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYEKLGADRVLYFIDSRQHQHLQQAWTI 352 Query: 371 ---AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 A V E + + + L +DG P K RAG + L ++DE + ++ Sbjct: 353 VRKAGYVPESTSLEHHAFGMM--LGKDGRPFKT--RAGGTVRLADLLDEAVERAT--ALI 406 Query: 428 WRKNSEL-----------LDFDFCKVKEQSKE-----------------NPVFYVQYAYA 459 KN EL + K + SK N Y+QYAY Sbjct: 407 ESKNPELDAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYT 466 Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 R SIF +A +L D+ D E L+ L ++ +++ +P+ Sbjct: 467 RVASIFAKAGVSMDELSGDI---------KITDEKEKALVAKLLQFEEAVQSVAREGQPH 517 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 + YL++LA F + + A + + RL+L A I GL ++G+ Sbjct: 518 IMCSYLFELAGQFSSFYEA------CPILIAEDESVKQSRLKLAALTAKTIQQGLELLGI 571 Query: 580 ESPNEM 585 E+ M Sbjct: 572 ETLERM 577 >gi|238799211|ref|ZP_04642660.1| Arginyl-tRNA synthetase [Yersinia mollaretii ATCC 43969] gi|238716940|gb|EEQ08807.1| Arginyl-tRNA synthetase [Yersinia mollaretii ATCC 43969] Length = 608 Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 137/594 (23%), Positives = 238/594 (40%), Gaps = 105/594 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L + Sbjct: 69 GDYQANGVMAVAKKLGMQPRQLAEKVIELLDLEGIASKVEIAGPGFINIFLDRQW----- 123 Query: 103 SSIVVSGIEYGRNLIGKGT------KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 V S +E+ G + +++ + N MHVGH R ++GD + F Sbjct: 124 ---VASKVEHALTAPKLGVAPVEPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEF 180 Query: 157 SGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPE 198 G+ V R ++ D G Q L L +F YQQA D D Sbjct: 181 LGHNVIRANHVGDWGTQFGMLIAYLEKMQNESASDMDLSDLELF--YQQAKKTYDEDEEF 238 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y+ V + D+Y ++ W +V D ++ A +I D L + + D Sbjct: 239 ALRARAYV--VKLQSGDEYCRQM-------WRKLV-DITM-AQNQIAYDRLN-VTLTKDD 286 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + E ++ P I+ +L +G E T D + + G+ Sbjct: 287 VMGESLYNAMLPG----IVADLKAKGLAVE-----SDGATVVYLDEYKNK-------DGE 330 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370 + + K DG Y Y D+A K +YE G D ++Y + + + V++ V Sbjct: 331 PMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYYIDTRQHQHLMQAWTIVRKAGYV 390 Query: 371 AAAVSEKKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LR 411 +V + ++L + + + R G +K+S +RAG I L+ Sbjct: 391 PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLDEAIERAGKLIAEKNPDMPADELK 450 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VV+ VG +V++ L + + FD+ + N Y+QYAY R S+F++A Sbjct: 451 QVVEAVGIGAVKYADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSVFKRAGVD 509 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 L L VI ++ E L L ++ VI P+ + YLYD+A + Sbjct: 510 ESSLTLPL----VITEDRE-----AALATRLLQFEEVITTVAREGTPHVMCSYLYDVAGL 560 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + H + + A + ++ RL+L A + GL+ +G+ + M Sbjct: 561 FSSFYEH------CQILNAESEEIRQSRLKLAMLTAKTLKQGLDTLGIRTVERM 608 >gi|313771792|gb|EFS37758.1| arginyl-tRNA synthetase [Propionibacterium acnes HL074PA1] gi|313831656|gb|EFS69370.1| arginyl-tRNA synthetase [Propionibacterium acnes HL007PA1] gi|313834810|gb|EFS72524.1| arginyl-tRNA synthetase [Propionibacterium acnes HL056PA1] gi|314975006|gb|EFT19101.1| arginyl-tRNA synthetase [Propionibacterium acnes HL053PA1] gi|314977897|gb|EFT21991.1| arginyl-tRNA synthetase [Propionibacterium acnes HL045PA1] gi|314984694|gb|EFT28786.1| arginyl-tRNA synthetase [Propionibacterium acnes HL005PA1] gi|315095588|gb|EFT67564.1| arginyl-tRNA synthetase [Propionibacterium acnes HL038PA1] gi|327332886|gb|EGE74618.1| arginine--tRNA ligase [Propionibacterium acnes HL096PA2] gi|327447714|gb|EGE94368.1| arginyl-tRNA synthetase [Propionibacterium acnes HL043PA2] gi|327448589|gb|EGE95243.1| arginyl-tRNA synthetase [Propionibacterium acnes HL043PA1] gi|328762012|gb|EGF75518.1| arginine--tRNA ligase [Propionibacterium acnes HL099PA1] Length = 582 Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 137/566 (24%), Positives = 239/566 (42%), Gaps = 63/566 (11%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH +N A+ L++ P +A IVA++ I+ ++ IAG GFINL L L ++ Sbjct: 57 GHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCETPEIAGPGFINLRLRTDVLARVA 116 Query: 103 SSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 S +V +GI K +V I++ + N MHVGH R ++GD +++ G+ Sbjct: 117 SDLVTDPNAGIAQAE----KPERVVIDYSAPNVAKQMHVGHLRSTIIGDCFNRVLSAQGH 172 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 V + +I D G Q L + + + S + + Y + AD+ Sbjct: 173 TVIPQNHIGDWGTQFGMLIEYIVEKRMDVEDFDLSGVEQLYQDSKKTFDADPQFADRARR 232 Query: 220 EL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-- 275 + L + + L I + ++ I + A + + ++++D G+ S D Sbjct: 233 RVVKLQGGDAETLRIWR-----TLIDISLEGFNATYARLSVLLTDEDVA-GESSYNDDLP 286 Query: 276 -IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334 ++D L G E D L + G D + K DG + Y Sbjct: 287 RVVDELVADGLAVE----------------DNGALCV--FVEGQDAPMIVRKRDGGFGYD 328 Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRL 391 A DLA + + + D +IYV + + + L VA A + + +V L Sbjct: 329 ATDLAAIRRRVGKLKADRIIYVTDVRQNHHFEVLFQVARMAGFLPDDVEAEHVGYGMV-L 387 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML----WRKNSELLDFDFCKVKE--- 444 DG P K R G ++L ++DE + + + L + S L D+ E Sbjct: 388 GPDGRPFKT--REGGTVSLSDLLDEAETHAAPNIALAAIKYADLSNGLQKDYVFDAERMV 445 Query: 445 QSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 Q+ + Y+QYA+AR I R+A ++ P+ D D I E +E QL Sbjct: 446 QTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMDWGRISVLDE--PAEQQLA 503 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 + L+ + ++E P+KL YLY+LA + + + P LR + ++ R Sbjct: 504 LLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYE---QCPVLR----STGEVRGSR 556 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L A ++ GL+++G+++P+ M Sbjct: 557 LALCAATRRVLGRGLDLLGIDAPDRM 582 >gi|223933231|ref|ZP_03625222.1| arginyl-tRNA synthetase [Streptococcus suis 89/1591] gi|223898161|gb|EEF64531.1| arginyl-tRNA synthetase [Streptococcus suis 89/1591] Length = 562 Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 146/604 (24%), Positives = 252/604 (41%), Gaps = 118/604 (19%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E+P+ G ++ A L++ P IA IV K+D +A ++N + Sbjct: 26 LLEKPKSSEMGDIAF-PAFSLAKVERKAPQAIAADIVE--KLDTTGFEKVVATGPYVNFF 82 Query: 93 LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + + ++L+ ++ +YG+ IG+G V I+ S N P VGH R V+GD LA Sbjct: 83 LDKAAISHQVLTDVITEKDQYGKLNIGQGRNVTIDMSSPNIAKPFSVGHLRSTVIGDALA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY+ R ++ D G Q L ++ W + A+ + P +Y++ + Sbjct: 143 NIHEKLGYKPIRINHLGDWGKQFGMLIVAYKLWGDKAAVEAD----PISELLKLYVR-IN 197 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 E +K L+ +W ++D +A + + RD+ L N +D D + Sbjct: 198 AEAEEKPE---LDDEARQWFKKLEDGDPEAHELWQWFRDESLVEFNRIYDKLDVTFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323 G+ + + I L +G + E SK + D++ L P Sbjct: 255 GEAFYNDKMDEGIQILEEKGLLQE-------SKGARIVDLESYNL-------------PP 294 Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374 ++K+DG+ Y D+A Y K Y+ F IYV+G + + K+L+AV + Sbjct: 295 ALIMKTDGATLYITRDMATAMYRKRTYD--FVKSIYVVGQEQINHFKQLKAVLKEMDFDW 352 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 S+ + L +D K+S R G+ I L +DE Sbjct: 353 SDDMTHVTFGLVT-----KDKK--KLSTRKGNIILLEPTLDEAISRALTQIEAKNPDLEN 405 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG +V+F L DFD V + + P YVQYAYAR +SI R+A Sbjct: 406 KEEVAHAVGVGAVKFYDLKTDRDNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKA 463 Query: 469 KDIFPDLDFDLFPRNVIPQ-ESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 N +P E+++ D +I H+ + V+E A +P +A Y Sbjct: 464 --------------NFVPSAENDYKLADAESWDIIKHIQNFSNVVERAGDKFDPSLIAKY 509 Query: 525 LYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 +LA F+ +++H R E+P RL L + ++ L ++GV++ Sbjct: 510 AINLAQAFNKYYAHTRILDESPERD-----------SRLALAYTTGLVLKEALRLLGVKA 558 Query: 582 PNEM 585 P +M Sbjct: 559 PEKM 562 >gi|171912424|ref|ZP_02927894.1| arginyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136] Length = 588 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 140/596 (23%), Positives = 242/596 (40%), Gaps = 72/596 (12%) Query: 30 DRIVIE--RPRDCAHGHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVF 82 D +VIE D G +NAAM ++ L ++P +A +V + + + Sbjct: 25 DGLVIEVTNASDSRFGDYQSNAAMTAAKLLSTKEQKINPRAMATQLVEAMDVTGLCEKPE 84 Query: 83 IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 IAG GF+N L+ L+ LSS++ G + + ++F + N PMHVGH R Sbjct: 85 IAGPGFLNFRLTKEALQGALSSLITDE-RLGVPAVDAAKTIVVDFSAPNVAKPMHVGHIR 143 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGY 200 +GD+L + +G+ V + ++ D G Q + R Q D +L Y Sbjct: 144 STFIGDSLTRIARLAGHNVVTDNHVGDWGTQFGMIIHGWKTRLNQDALKEDPIHELVRVY 203 Query: 201 YPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 + + + +EL+ + + L I K+ V+ + + D L IQ D Sbjct: 204 REINAATKADESVLETCKTELVKLQQGDAENLAIWKE-CVKLTLDQLHDIYGRLGIQFDH 262 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 ++ E ++ + D++ Q + EG S +K + D F G Sbjct: 263 YLGESYYNDALAPLVEDMLTK--GQARISEGA-ACVFSDGVKKPEEDP----FLINRDGQ 315 Query: 319 DVDRPLL--KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375 P + KSDG + Y DLA + E D + YV+G+ + +++ A Sbjct: 316 WTPAPCIVRKSDGGFLYATTDLATIDHRVIEWKADEIWYVVGAPQQLHFRQVFEAAHRRG 375 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416 +++ + L DG K R+G+ + L V+DE Sbjct: 376 HSTRMVHIAFGSI--LGPDGKMFKT--RSGESVGLLEVIDEAIERARAVVEEREFSDDDK 431 Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS-KENPVFYVQYAYARCRSIFRQAK 469 +G +V++ L + D+ F K S + N Y+ AY R R+IFR+ Sbjct: 432 AKIASVIGIAAVKYAEL--SQHRMTDYKFAWEKMLSFQGNTAPYLLNAYVRTRAIFRK-- 487 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 LD ++ + P+ S + +E QL + LA++ + + P LA YLY+LA Sbjct: 488 -----LDGEV---KLAPEVSFTEDAERQLALKLAQFGEAVHDVLEDFRPNLLAQYLYELA 539 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +H + P LR RL L + ++ SGL ++G+E+ + M Sbjct: 540 GYYHTFYE---ACPVLRSEGVTRN----TRLVLADTTSRVLKSGLGLLGIETTDRM 588 >gi|37526009|ref|NP_929353.1| arginyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii TTO1] gi|39932033|sp|Q7N565|SYR_PHOLL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|36785439|emb|CAE14385.1| Arginyl-tRNA synthetase (Arginine-tRNA ligase) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 576 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 138/602 (22%), Positives = 240/602 (39%), Gaps = 103/602 (17%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 I + G N M ++ +G+ P +AE +V + + V IAG GFIN++L Sbjct: 28 IRQSAKAQFGDYQANGVMAAAKKVGMPPRQLAEKVVNLLNLQGIASKVEIAGPGFINIFL 87 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 +++ + + + E K + +++ + N MHVGH R ++GD Sbjct: 88 DKAWIAANIETALKD--EKLGVTPAKPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRT 145 Query: 154 MAFSGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSD 195 + F G++V R ++ D G Q L L F+R + Y+ D + Sbjct: 146 LEFLGHKVIRANHVGDWGTQFGMLIAYLEKVQNENASDMALSDLEAFYREAKKHYDEDEE 205 Query: 196 LP---EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252 GY V + D+Y + W +V Q R ++ Sbjct: 206 FAIRARGYV-------VKLQGGDEYCRTM-------WRKLVDITMAQNQQTYDRLNV--- 248 Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312 + D + E ++ PS I+ +L +QG E T D + + Sbjct: 249 TLTKDSVMGESLYNDLLPS----IVADLKQQGLAVES-----DGATVVYLDEYKNK---- 295 Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------V 364 G+ + + K DG Y Y D+A K +YE D ++Y + S + V Sbjct: 296 ---EGEPMGVIIQKQDGGYLYTTTDIACAKYRYETLHADRILYYIDSRQHQHLMQAWTIV 352 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFI------- 408 ++ V +VS + ++L + + + R G ++++ +RA I Sbjct: 353 RKAGYVPESVSLEHHMFGMMLGKDSKPFKTRAGGTVRLTDLLDEAIERANTLIREKNPDM 412 Query: 409 ---TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 L+ VV VG +V++ L + + FD+ + + N Y+QYAY R SIF Sbjct: 413 PEDELKKVVSAVGIGAVKYADLSKSRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVASIF 471 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE--PYKLAF 523 ++A ++D VI E E L L ++ I T+A+E P+ + Sbjct: 472 KRA-----EIDESSLTLPVILNEDR----EQTLATRLLQFEETI--TTVAREGTPHVMCA 520 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 YLYDLA +F + H + + A + +L RL+L A + GLN +G+E+ Sbjct: 521 YLYDLAGLFSCFYEH------CQILNAESEELRQSRLKLALLTAKTLKQGLNTLGIETVE 574 Query: 584 EM 585 M Sbjct: 575 RM 576 >gi|282889548|ref|ZP_06298090.1| hypothetical protein pah_c001o023 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500561|gb|EFB42838.1| hypothetical protein pah_c001o023 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 586 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 148/601 (24%), Positives = 251/601 (41%), Gaps = 96/601 (15%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKGFI 89 I + GH N+AM L++ LG P IA I+ + ++ + ++ + IAG GFI Sbjct: 33 ISQSTQAQFGHYQCNSAMKLAKVLGAKPRDIATRIIEHVDVNLEGIRLIEKMEIAGPGFI 92 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N+ L P+YL + L I++ L K+ +EF S N +HVGH R ++GD+ Sbjct: 93 NITLDPAYLSQKLHRILLDS-HLDIELPQHKQKIIVEFSSPNTAKELHVGHLRSTIIGDS 151 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND-SDLPEGYYPGVYLKH 208 LA L F G++V R +I D G L + + L + +DL +L Sbjct: 152 LARLFEFLGHDVLRLNHIGDWGTAFGMLIAYMKQKTPHVLDGTEKTDLQ-------HLVQ 204 Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 K+ +++ S+ +F + L +V A+ LKA I DI R Sbjct: 205 WYKKSKERFDSD-ADFKKTSQLEVV------ALQGGDPAALKAWEIICDI-------SRK 250 Query: 269 DPSPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG---------- 317 I D++D + +G Y P + T D++ K L+ S Sbjct: 251 AYQEIYDLLDVKIIERGESYYN---PMLADTV--ADLEAKGLVTLSDGAKCIFLEGFQNR 305 Query: 318 DDVDRPLL--KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAA- 373 + PL+ KSDG Y Y D+A + + E D +IYV + S + + + A Sbjct: 306 EGASLPLMVQKSDGGYNYDTTDMAAIRQRTLEEKADRIIYVTDAGQSLHFQMIFQAAEKA 365 Query: 374 --VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD--------FITLRH----------- 412 + K +++ + LV L DG K R+G+ ++H Sbjct: 366 HYLDASKVRVDHVPFGLV-LGSDGK--KFRTRSGETERLIDLLLAAVKHADQLLIERSPE 422 Query: 413 --------VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 + +G +V++ L + F + ++ + + N ++ YAY R I Sbjct: 423 MPKEEREKLAKTLGIAAVKYADLACNRTGDYTFSYERML-RFEGNTAAFLMYAYVRVAGI 481 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R+ I P L + ++ + SE+ L VHLA++ +E P +L Y Sbjct: 482 KRK---INPALKIEELKDPIVLEHP----SEISLAVHLAQFEEALEQVASDLLPNRLTEY 534 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 LY LA F+ + R V+ + ++ + RLQ+ VA + GL+I+GV++ Sbjct: 535 LYGLAEKFNAFFRDCR-------VEGSPQQNS--RLQICEIVAKTMKQGLSILGVQTVER 585 Query: 585 M 585 M Sbjct: 586 M 586 >gi|330718773|ref|ZP_08313373.1| arginyl-tRNA synthetase [Leuconostoc fallax KCTC 3537] Length = 553 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 144/597 (24%), Positives = 251/597 (42%), Gaps = 105/597 (17%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +E P+ G ++ L++ L P IA IVA I+ + +A ++N +L Sbjct: 17 LEAPKSSQLGDVAF-PTFTLAKALRKAPQQIAADIVA--TINQEGFEKIVATGPYVNFFL 73 Query: 94 SP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 S + ILS ++ +G N G+ + I+ S N PM +GH R V+G+ LA+ Sbjct: 74 DKVSTSQDILSDVLSKKNTFGDNNDGQTANITIDMSSPNIAKPMSMGHLRSTVIGNALAN 133 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 + +GY+ + ++ D G Q L + W ++ + ++ P Y++ K Sbjct: 134 ITQKNGYQPVKINHLGDWGTQFGKLIYAYKTWGSEEEVKSD----PIATLLRYYVEFHEK 189 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 AD E LN W ++D +A H+++ F Sbjct: 190 AKAD----ESLNDEGRAWFKKLEDGDAEA---------------HELWQW---FRNESLK 227 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCD-MDRKQLLFRS--------TMVGDDVDR 322 +I D L Q + G K TQ D ++ KQLL S + V +++ Sbjct: 228 EFTEIYDRLDIQFDSFNG-EAFYNDKMTQVVDLLNEKQLLVESQGAQIVDLSTVDENLTP 286 Query: 323 PLLK-SDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EK 377 ++K SDG+ Y DLA Y K Y F +YV+G + + ++++AV + + E Sbjct: 287 AMIKRSDGATLYMTRDLAAALYRKNTY--NFAKSLYVVGGEQREHFRQMKAVLSLLGFEW 344 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416 + + L+ +G KMS R GD + L+ V+D+ Sbjct: 345 ADDVEHIAFGLITF--NGK--KMSTRKGDVVLLKDVLDDAHELALKQIQEKNPTLANKDE 400 Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VG+ +V F L + DF + V+ + P YVQY AR SI R+A+ Sbjct: 401 VAEKVGAGAVVFHDLMNDRTNNFDFSLEEVVRFEGDTGP--YVQYTRARALSILRKAQ-- 456 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 ++D + D + ++ L ++P V+ A +EP +A Y L+ Sbjct: 457 -QEVDMASLSLD--------DQATWDVVTSLGQFPTVVRQAWQRREPSIIAKYALHLSRA 507 Query: 532 FHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ ++++ R E+ +L RL LV++VA ++ L ++GV++P EM Sbjct: 508 FNKYYANSRILNEDDQLN-----------ARLALVNSVAIVLEESLRLLGVKAPEEM 553 >gi|148828426|ref|YP_001293179.1| arginyl-tRNA synthetase [Haemophilus influenzae PittGG] gi|166232792|sp|A5UJ40|SYR_HAEIG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|148719668|gb|ABR00796.1| arginyl-tRNA synthetase [Haemophilus influenzae PittGG] Length = 577 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 140/594 (23%), Positives = 237/594 (39%), Gaps = 104/594 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LGL+P A+ ++ ++ + + IAG GFIN++L+P++L + Sbjct: 37 GDYQANGIMAAAKKLGLNPREFAQKVLDNAQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 S+ +S G K T V I++ S N MHVGH R ++GD +A + F G+ V Sbjct: 97 SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220 R ++ D G Q L + Q + ++ +L E +Y A K+ E Sbjct: 155 RANHVGDWGTQFGMLI--AYLEKMQHEHASEMELQDLEAFY----------REAKKHYDE 202 Query: 221 LLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNIQH-----DIFISEDDFHRGDP- 270 F E+ +VK D + M K + D N QH ++ ++E D G+ Sbjct: 203 DEIFAEKARNYVVKLQSGDEYCRTMWKRLVDITMQQN-QHNYNRLNVTLTEKDV-MGESL 260 Query: 271 -SP-IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 +P + I+++L +QG E G L + K GD + + K Sbjct: 261 YNPMLPSIVEDLKKQGLAVENDGALVVYLDEFKNKD--------------GDPMGVIVQK 306 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY--------VKRLEAVAAAVSEKK 378 DG + Y D+A K +YE N V ++ V + S + Sbjct: 307 KDGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEH 366 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 ++L +DG P K R G I L ++DE Sbjct: 367 KNFGMMLG------KDGKPFKT--RTGGTIKLADLLDEAIERATVLINEKNTNLSNDEKE 418 Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VG +V++ L + + FD+ + + N Y+QYAY R RSIF + Sbjct: 419 AVIEAVGIGAVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNKT--- 474 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 D + P + D E L + L ++ ++ P+ L YLY+LA + Sbjct: 475 ----DINSTALLAAPLTIK-DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYELAGI 529 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + H + A + + + RL+L + GL ++G+++ +M Sbjct: 530 FSSFYEH------CPILNAEDESIKLSRLKLALLTEKTLKQGLTLLGIKTVEKM 577 >gi|329666892|gb|AEB92840.1| arginyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026] Length = 558 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 148/602 (24%), Positives = 257/602 (42%), Gaps = 115/602 (19%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 ++IERP++ G + A L++ +P IA+ I +I D + S+ G ++N Sbjct: 24 MLIERPKNPKMGDYAF-PAFALAKIEHKNPALIAKDIAEKIS-DDNFTSIQAVGP-YVNF 80 Query: 92 YLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + + L L+ ++ +G +G+G V I+ S N PM +GH R V+G+++ Sbjct: 81 AIDHAKLVNATLNDVLTEKEHFGDQKLGEGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSI 139 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV---YLK 207 A + GY + Y+ D G Q L + +R L+ N+ D+ + + Y+K Sbjct: 140 AKTLEKVGYTPIKINYLGDYGTQFGKLITA--YR----LWGNEEDVKKDPITNLFHYYVK 193 Query: 208 -HVGKELADKYSSE-------LLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNI 254 H E K E L N EE KW ++ S+Q +I K L + Sbjct: 194 FHEEAEKDPKLEDEGRAAFKKLENGDEEEIKLWKWF---REVSLQEFNRI----YKELGV 246 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 D + E F+ ++ ++D L +G + E S+ Q ++ Sbjct: 247 TFDSYNGEAFFN----DKMQPVVDELREKGLLEE-------SRGAQVVNL---------- 285 Query: 315 MVGDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 G+D + L LKSDGS Y DLA Y K +Y+ F +YV G + +G+ K+L+ V Sbjct: 286 --GEDENPALILKSDGSSLYMTRDLAAALYRKKEYD--FVMSLYVAGGEQTGHFKQLKQV 341 Query: 371 -----------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407 +S +K + V L ++++ ++ ++ + Sbjct: 342 LKKMGYDWSDNIHHIPFGLITQGGKKLSTRKGNV-VFLDQVLKDAVSLAEQQIEEKNPNL 400 Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFR 466 + V +VG +V F L + DFD + V+ + P YVQY AR +SI R Sbjct: 401 SNKKQVAHDVGVGAVVFHDLKNDRMDNFDFDLEEVVRFEGDTGP--YVQYTNARAQSILR 458 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 +A ++ D N D + LA++P ++E A+ EP +A Y Sbjct: 459 KAN---KEISMDNLSLN--------DDWSFAVAKALADFPAIVEKASEKFEPSIIAKYAL 507 Query: 527 DLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 DL+ F+ ++++ R E+ +L RL LV A + ++ L ++GV +P Sbjct: 508 DLSKKFNKYYANVRILDEDDQLN-----------ARLALVQATSIVLTEALRLLGVNAPK 556 Query: 584 EM 585 EM Sbjct: 557 EM 558 >gi|269925558|ref|YP_003322181.1| arginyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798] gi|269789218|gb|ACZ41359.1| arginyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798] Length = 601 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 135/548 (24%), Positives = 252/548 (45%), Gaps = 93/548 (16%) Query: 84 AGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 A G++N++ PS + ++L+++ G YGR K V +E+ N H+GH R Sbjct: 101 AQNGYVNMFFEPSDVALRLLATVHEQGDSYGRG-NPKSETVMVEYGQPNTHKQFHIGHLR 159 Query: 143 CAVVGDTLASLMAFSGY-EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYY 201 +GD++A ++ F+GY +V + YI D GA + + W Y + ++ + + Y Sbjct: 160 NTALGDSIARILDFAGYRKVLKASYIGDIGAHV----IKWLWGYNK-WHSGEQPPADPYK 214 Query: 202 PGVYLKHV--------------GKELADKYSSELLNFPE--EKWLPIVKDYSVQAMMKII 245 G +L+ + +E D ++ PE E W +++S+ +I Sbjct: 215 IGPWLESIYVEANSAIESNPDYQREYRDLFARWDRRDPEVVELWRR-TREWSLNYFRRI- 272 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 K L++ D++ E DF P + I+ +L +G V E P + QK ++ Sbjct: 273 ---FKELDVNFDVWFYESDFE----EPGKKIVQDLLNKG-VAEIDEGAPIVRIDQKLGLE 324 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYV 364 ++ +R+ + L +SDG+ Y +LA + K+ E D ++ V+ + Y Sbjct: 325 KE--TYRTIV--------LQRSDGTSLYQTKELALTRTKFDEYKVDRILNVVDVRQTLYF 374 Query: 365 KRLEAVAAAVSEKKAQINVLL-CELVRL------YRDGMPI-------KMSKRAGDFITL 410 +++ V + ++A+ + + ELV L R+G + +M +RA + + Sbjct: 375 QQVFKVLELLGYEQARNSQHIPYELVSLPTGPMSSREGTTVGYDEFATEMYERALEVVRE 434 Query: 411 RH----------VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF---YVQYA 457 ++ + V S++F ML R N+ +L FD KE++ + F YVQYA Sbjct: 435 KNPEMPQEQQERIARIVSMGSMKFGMLNRDNTRVLVFD----KEEALDFDGFSAPYVQYA 490 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 +AR I +A PD+D++ I + S +T+ L++I L E +E A + Sbjct: 491 HARACRILEKA----PDIDWENLR---IGELSTVETNLLEMISRLNE---SVERAAREYK 540 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 P + Y+Y+LA F+ + R +P LR ++ RL +V+A + + L ++ Sbjct: 541 PLHVVNYVYELAKTFNEFY---RVSPVLR----AEEEVRNFRLAVVYATKVCLANSLYLL 593 Query: 578 GVESPNEM 585 G+E+P M Sbjct: 594 GIEAPEVM 601 >gi|254506840|ref|ZP_05118979.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus 16] gi|219550125|gb|EED27111.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus 16] Length = 605 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 133/603 (22%), Positives = 236/603 (39%), Gaps = 122/603 (20%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG +P A+ ++ + +D IAG GFIN++LS +L K Sbjct: 65 GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 124 Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 S + R + K + I ++ + N MHVGH R ++GD + + F G++ Sbjct: 125 ESALADA----RLGVAKEEQQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHK 180 Query: 161 VTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGYY 201 V R +I D G Q L L F+R + LY+ D + Sbjct: 181 VIRANHIGDWGTQFGMLIANLERVQKESGEVSMELSDLEAFYRESKKLYDEDEEFALRAR 240 Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 V G D+Y +E+ W +V VQ + Sbjct: 241 NYVVKLQSG----DEYCAEM-------WKKLVDVTMVQ---------------------N 268 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GD 318 + ++ R + S RD + + + GI+ K + + D D Q++F G+ Sbjct: 269 QRNYDRLNVSLTRDDVMGESMYNDMLPGIVADLKERGIAQED-DGAQVVFLEEYKNKDGE 327 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370 + + K DG + Y D+A K +YE G + ++Y + S + V++ V Sbjct: 328 AMGVIIQKRDGGFLYTTTDIACAKYRYETLGANRVLYFIDSRQHQHLMQAWTIVRKAGYV 387 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430 VS + ++L +DG P K RAG + L ++DE +++ ++ K Sbjct: 388 PEEVSLEHHAFGMMLG------KDGRPFKT--RAGGTVRLADLLDEAEERAIK--LIESK 437 Query: 431 NSELLDFDFCKV---------------KEQSKE-------------NPVFYVQYAYARCR 462 N++L + K+ K ++ + N Y+QYAY R Sbjct: 438 NADLDSEEKVKIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVS 497 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 SIF +A + D + E + E LI L ++ +++ +P+ + Sbjct: 498 SIFAKA-----GISMDNLAGEIKVTEEK----EKALIAKLLQFEEAVQSVAREGQPHIMC 548 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 YL++LA F + + + + RL+L A I GL+++G+E+ Sbjct: 549 SYLFELAGQFSSFYEA------CPILNTEDESVKQSRLKLAALTAKTIKQGLSLLGIETL 602 Query: 583 NEM 585 M Sbjct: 603 ERM 605 >gi|327394189|dbj|BAK11611.1| arginyl-tRNA synthetase ArgS [Pantoea ananatis AJ13355] Length = 562 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 135/590 (22%), Positives = 237/590 (40%), Gaps = 97/590 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG P +AE ++ + + V IAG GFIN++L R L Sbjct: 23 GDYQANGIMAVAKKLGQAPRQLAETVIQHLDLTGIASKVEIAGPGFINIFLD----RGWL 78 Query: 103 SSIVVSGIEYGRNLIGK--GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + + +++ R + + + +++ + N MHVGH R ++GD +AF G+ Sbjct: 79 AEHARNALQHPRLGVARVEPQTIVVDYSAPNVAKEMHVGHVRSTIIGDAAVRTLAFLGHN 138 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 V R ++ D G Q L F QQ N +++ G Y + A + E Sbjct: 139 VIRANHVGDWGTQFGMLI--AFLEKQQN--ENHAEMALADLEGFYRE------AKRTYDE 188 Query: 221 LLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPI 273 F E +VK DY Q K++ DI +S++ + R + + Sbjct: 189 DPEFAERARRYVVKLQGGDDYCRQMWKKLV-----------DITMSQNQHIYDRLNVTLT 237 Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF---RSTMVGDDVDRPLLKSDGS 330 R + + + GI+ K+K + + ++F G+ + + K DG Sbjct: 238 RKDVMGESLYNDMLPGIVADLKAKGL-AVESEGATVVFLDEYQNKEGEPMGVIIQKKDGG 296 Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQIN 382 Y Y D+A K +YE D +IY + S + V++ V +V + Sbjct: 297 YLYTTTDIACAKYRYETLHADRVIYYIDSRQHQHLQQAWTIVRKAGYVPESVPLEHHAFG 356 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416 ++L +DG P K R+G I L ++DE Sbjct: 357 MMLG------KDGRPFKT--RSGGTIKLSDLLDEAYDRAYSLVSEKNPEMSEEERRALAE 408 Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 VG +V++ L + + FD+ + + N Y+QYAY R S+FR+A + Sbjct: 409 VVGVSAVKYADLSKSRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----GI 462 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + D ++ + D E L L ++ VI P+ + YLYD+A +F G Sbjct: 463 EADAIQADI----TLTDDREALLATRLLQFEEVITQVARDGTPHVMCAYLYDVAGLFSGF 518 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + H + A + RLQ+ A + GL+ +G+++ + M Sbjct: 519 YEH------CPILAAEDEATRQSRLQIAALTAKTLKLGLDTLGIKTVDRM 562 >gi|257463219|ref|ZP_05627618.1| arginyl-tRNA synthetase [Fusobacterium sp. D12] gi|317060806|ref|ZP_07925291.1| arginyl-tRNA synthetase [Fusobacterium sp. D12] gi|313686482|gb|EFS23317.1| arginyl-tRNA synthetase [Fusobacterium sp. D12] Length = 570 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 124/575 (21%), Positives = 240/575 (41%), Gaps = 75/575 (13%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AM+ S+ +G +P IAE I + + ++ + IAG GFIN++L +YL + Sbjct: 39 GDFQCNFAMMNSKIIGKNPRMIAEEIQKNLVENEVIEKLEIAGPGFINIFLKEAYLSTFI 98 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 I ++ + + + V I+F S N MH+GH R ++GD++ + + GY V Sbjct: 99 KKIGKERFDF--SFLNRKGDVVIDFSSPNIAKRMHIGHLRSTIIGDSICRIYRYLGYHVI 156 Query: 163 REYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYY---PGVYLKHVGKELADKYS 218 + +I D G Q L + W Q A N + E Y +H E + Sbjct: 157 GDNHIGDWGTQFGKLIIGYRKWLDQDAYKKNAIEELERVYVKFSQESEEHPELEEEARLE 216 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 + L +E+ + K++ +Q M+ L+I D F E +H P ++++++ Sbjct: 217 LKKLQDGDEENYNLWKEF-IQVSMEEYEKLYSRLDIHFDTFYGESFYHPIMPEVVKELVE 275 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 + ++ P+ + C + +K DG++ Y +D+ Sbjct: 276 RGIAKEDDGAKVVFFPEEENLFPCIVQKK--------------------DGAFLYATSDI 315 Query: 339 AYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397 A K + + + +IY+ + K+ + + + +V + + DG+ Sbjct: 316 ATVKFRLHTYDVNRLIYLTDERQQDHFKQFFRITEMLGWNVEKYHVWFG--IMRFADGV- 372 Query: 398 IKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMMLWRK 430 S R G+ I L ++DE VG ++++ L + Sbjct: 373 --FSTRKGNVIRLEELLDEGKRRAYEIVQEKNPSLPEEEKQHIAEVVGVGAIKYADLSQN 430 Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490 + F++ K+ + N Y+QY+YAR +SI +AK++ + D+ ++ Q Sbjct: 431 RQSPIIFEWDKIL-SFEGNTAPYLQYSYARVQSILDKAKNLGKEATEDVV---LVLQ--- 483 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550 D E L ++ +P + A +P +A YLYDL+ + +++ P L Sbjct: 484 -DKYERSLANYMTIFPSSVLKAAETCKPNLIADYLYDLSKKLNSFYNNC---PILN---- 535 Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ R L +I GLN++G+++ + M Sbjct: 536 QEEEILKSRAYLAKQAGEVIKQGLNLLGIQTLDRM 570 >gi|237807247|ref|YP_002891687.1| arginyl-tRNA synthetase [Tolumonas auensis DSM 9187] gi|237499508|gb|ACQ92101.1| arginyl-tRNA synthetase [Tolumonas auensis DSM 9187] Length = 580 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 139/547 (25%), Positives = 230/547 (42%), Gaps = 88/547 (16%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 RI ++ +D AHG L+TN AM+L++P G +P +A+LI+ + V IAG GFIN Sbjct: 29 RIQVDNTKDKAHGDLATNLAMLLAKPAGKNPRELAQLIIEHLPASTLVARAEIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +L ++L K + +I S + T V +++ + N M V H R V+GD + Sbjct: 89 FFLDSAWLAKQIEAIAASPKAEVKAAAPAQTIV-LDYSAPNVAKEMAVHHIRSTVIGDAV 147 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ--QALYNNDSDLPEGYYPGVYLKH 208 M F G+ V R +I D G Q L ++ + Q QA SDL E +Y Sbjct: 148 TRTMEFLGHHVIRANHIGDWGTQFGML-IAYLEKVQNEQASELELSDL-EAFY------- 198 Query: 209 VGKELADKYSSELLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALN-IQHD---IFI 260 A K+ E F E +VK D +AM K + D A N I +D + + Sbjct: 199 ---REAKKHYDEDEVFAERARGYVVKLQGGDEYCRAMWKKLVDITMAQNQIIYDRLNVSL 255 Query: 261 SEDDFHRGDP--SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 SE D G+ +P +R ++++L +G E + +++ + G Sbjct: 256 SEKDV-MGESLYNPMLRTVVEDLQAKGLAVES---------------EGALVVYLDEIKG 299 Query: 318 DDVDRPLL---KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAA 373 D + + K DG + Y D+A K + E D ++Y + S ++++ +A Sbjct: 300 KDGEAMAVIIQKRDGGFLYATTDIACAKYRVETLKADRVLYFIDSRQHQHLQQAWMIARK 359 Query: 374 VSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE---------------- 416 Q+++ + L +DG P K R G + L ++DE Sbjct: 360 AGYVPEQVSLEHHAFGMMLGKDGKPFKT--RTGGTVKLSELLDEAELRAGALIAEKSADL 417 Query: 417 -----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 V +V++ L + + FD+ + + N Y+QYAY R +SIF Sbjct: 418 PEAEKAKVIHAVAMGAVKYADLSKNRTTDYIFDWDNML-TFEGNTAPYLQYAYTRIQSIF 476 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 R+ D + P + +E L L ++ V+ N P+ L YL Sbjct: 477 RRVGD-----EAQPGPVQITA------PAEETLAQKLLQFNDVVHNVAQKGMPHLLCTYL 525 Query: 526 YDLASVF 532 Y+L+ F Sbjct: 526 YELSGCF 532 >gi|59711446|ref|YP_204222.1| arginyl-tRNA synthetase [Vibrio fischeri ES114] gi|75354336|sp|Q5E6L2|SYR_VIBF1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|59479547|gb|AAW85334.1| arginyl-tRNA synthetase [Vibrio fischeri ES114] Length = 577 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 136/600 (22%), Positives = 231/600 (38%), Gaps = 116/600 (19%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG +P A+ ++ + +D IAG GFIN++LS +L K Sbjct: 37 GDYQANGVMGVAKRLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + + R + K + NI ++ + N MHVGH R ++GD + + F G+ Sbjct: 97 EAALADE----RLGVAKEEQQNIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHN 152 Query: 161 VTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGYY 201 VTR +I D G Q L L F+R + LY+ D + Sbjct: 153 VTRANHIGDWGTQFGMLIANLERIQKEKGEVSMELSDLEGFYRESKKLYDEDEEFAVTAR 212 Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 V G E F E W +V VQ R + +++ D + Sbjct: 213 GYVVKLQSGDE-----------FCAEMWKKLVDVTMVQNQRNYDRLN---VSLTRDNVMG 258 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E ++ S + I+ +L +QG E S+ Q +D + G+ + Sbjct: 259 ESMYN----SMLAPIVADLQKQGLAVE-------SEGAQVVFLDEYK-----NKDGEPMG 302 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAA 373 + K DG + Y D+A K +YE D ++Y + S + V++ V + Sbjct: 303 VIVQKRDGGFLYTTTDIACAKYRYEELNADRVLYFIDSRQHQHLMQAWTIVRKAGYVPES 362 Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433 VS + ++L +DG P K RAG + L ++DE + + ++ KN + Sbjct: 363 VSLEHHAFGMMLG------KDGRPFKT--RAGGTVRLADLLDEAEERATK--LIEEKNKD 412 Query: 434 LLDFDFCKV---------------KEQSKE-------------NPVFYVQYAYARCRSIF 465 L + K+ K ++ + N Y+QYAY R SIF Sbjct: 413 LSAEEKAKIATTVAMAAVKYSDLSKHRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVASIF 472 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 +A L D V D E L+ L ++ ++ +P+ + YL Sbjct: 473 SKA-----GLSMDELTGEVKIT----DEKEKALVAKLMQFEEAVQAVASEGQPHLMCAYL 523 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++LA F + + + + RL+L A I GL ++G+E+ M Sbjct: 524 FELAGQFSSFYEA------CPILNNEDDAVKQSRLKLAALTAKTIKQGLELLGIETLERM 577 >gi|262047826|ref|ZP_06020776.1| arginyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US] gi|260571883|gb|EEX28454.1| arginyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US] Length = 561 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 138/596 (23%), Positives = 252/596 (42%), Gaps = 102/596 (17%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IERP++ G + A IL++ L +P IA+ I + D + ++ G ++N Sbjct: 25 LIERPKNAKMGDYAF-PAFILAKTLHKNPAEIAKNIADNLSSD-NFANIQAVGP-YVNFA 81 Query: 93 LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + L L ++ YG IG+G V I+ S N PM +GH R V+G+++A Sbjct: 82 IDHEKLVSSTLKDVLTEKEHYGDQKIGEGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 M GY + Y+ D G Q L + Y+ + N+ D+ + ++ +V Sbjct: 141 KTMEKVGYTPIKINYLGDYGTQFGKLIAA----YKH--WGNEEDVKKDPIMNLFHYYVKF 194 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAM----------MKIIRDDLKALNIQHDIFIS 261 + + EL N E W ++D +A+ +K + K L + D + Sbjct: 195 HQEAEKNPELDNEGRE-WFKKLEDGDPEAVKLWKWFREVSLKDFKRIYKELGVTFDSYNG 253 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E F+ ++ +ID L +G ++E S+ Q DM + Sbjct: 254 EAFFN----DKMQPVIDELKEKGLLHE-------SRGAQVVDMGEGE------------- 289 Query: 322 RP--LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV-------- 370 P ++KSDG+ Y DLA + + E F M+YV+G++ + + L+ V Sbjct: 290 NPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQAQHFVELKTVLKKMGYDW 349 Query: 371 ---------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 +S +K + V L ++++ ++ ++ D V Sbjct: 350 ADEIHHVPFGLITQGGKKLSTRKGNV-VFLDQVLKDAVSLAKKQIQEKNPDLADQDQVAH 408 Query: 416 EVGSDSVRFMMLWRKNSELLDFDF---CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 +VG +V F L KN L +FDF V+ + P YVQY AR +S+ R+A + Sbjct: 409 DVGVGAVVFHDL--KNDRLDNFDFDLEEVVRFEGDTGP--YVQYTNARAQSVLRKAAAMG 464 Query: 473 PDLDFDLFPRNVIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 + P E++ D + LA++PR++ + EP +A + DLA Sbjct: 465 EN-----------PSETDLALDDDWAFAVAKDLADFPRIVARSAEKFEPSVIAKFALDLA 513 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++++ ++ + +++ RL LV A + ++ L ++GV +P EM Sbjct: 514 KKLNKYYAN------VKILTKDDK--IGARLALVQATSIVLTESLRLLGVNAPKEM 561 >gi|73953494|ref|XP_866938.1| PREDICTED: similar to arginyl-tRNA synthetase isoform 4 [Canis familiaris] Length = 597 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 131/571 (22%), Positives = 249/571 (43%), Gaps = 70/571 (12%) Query: 51 MILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI 110 M+ ++ ++P IAE I + + V+ V IAG GFIN++L ++ + L++++V+G+ Sbjct: 61 MLKTKEQKVNPREIAENITKHLPDNECVERVEIAGPGFINVHLRKDFVSQQLTNLLVNGV 120 Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170 + +G+ KV ++F S N MHVGH R ++G+++ L F+GY+V R ++ D Sbjct: 121 QLP--ALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNHVGDW 178 Query: 171 GAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228 G Q L + ++ L + DL + +Y + +E K + + + + K Sbjct: 179 GTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFKKRAYQCVVLLQSK 237 Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGY 285 I+K + + + + R + + DI + E RG+ + D++ +G+ Sbjct: 238 NPDIIKAWKL--ICDVSRQEFNKIYDALDISLIE----RGESFYQDRMNDVVKEFEDKGF 291 Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK- 344 V + D D ++++F + G V ++KSDG YTY +DLA K + Sbjct: 292 V--------------QVD-DGRKIVF---VPGCSVPLTIVKSDGGYTYDTSDLAALKQRL 333 Query: 345 YERGFDNMIYVMGSDHSGYVKRLEAVAAAV-------------------SEKKAQINVLL 385 +E D +IYV+ + S + + + A + E K + Sbjct: 334 FEEKADMIIYVVDNGQSVHFQTIFGAAQMIGWYDPKVTRVSHAGFGVVLGEDKKKFKTRS 393 Query: 386 CELVR---LYRDGMPIKMSK---RAGDFI----TLRHVVDEVGSDSVRFMMLWRKNSELL 435 E VR L +G+ M K + D + L+ V +++ L Sbjct: 394 GETVRLIDLLEEGLKRSMDKLKEKERDKVLTAEELKAAQTSVAYGCIKYADLSHNRLNDY 453 Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TS 494 F F K+ + + N Y+ YA+ R RSI R A +++ ++ + + D Sbjct: 454 IFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NINEEMLQKAAQETKIVLDHEK 507 Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554 E +L + +P +++ + L Y+Y+LA+ F + + R K Sbjct: 508 EWKLGRCILRFPEILQKILDDLLLHTLCDYIYELATTFTEFYDSCYCVEKDRQT-GQVLK 566 Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + M R+ L AVA+I+ +I+G++ M Sbjct: 567 VNMWRMLLCEAVAAIMAKAFDILGIKPVQRM 597 >gi|16273477|ref|NP_439728.1| arginyl-tRNA synthetase [Haemophilus influenzae Rd KW20] gi|260580361|ref|ZP_05848190.1| arginyl-tRNA synthetase [Haemophilus influenzae RdAW] gi|1174541|sp|P43832|SYR_HAEIN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|1574424|gb|AAC23231.1| arginyl-tRNA synthetase (argS) [Haemophilus influenzae Rd KW20] gi|260093038|gb|EEW76972.1| arginyl-tRNA synthetase [Haemophilus influenzae RdAW] Length = 577 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 139/594 (23%), Positives = 237/594 (39%), Gaps = 104/594 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LGL+P A+ ++ +++ + + IAG GFIN++L+P++L + Sbjct: 37 GDYQANGIMAAAKKLGLNPREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 S+ +S G K T V I++ S N MHVGH R ++GD +A + F G+ V Sbjct: 97 SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220 R ++ D G Q L + Q + ++ +L E +Y A K+ E Sbjct: 155 RANHVGDWGTQFGMLI--AYLEKMQNEHASEMELQDLEAFY----------REAKKHYDE 202 Query: 221 LLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNIQH-----DIFISEDDFHRGDP- 270 F E+ +VK D + M K + D N QH ++ ++E D G+ Sbjct: 203 DEVFAEKARNYVVKLQSGDEYCRTMWKRLVDITMQQN-QHNYARLNVTLTEKDV-MGESL 260 Query: 271 -SP-IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 +P + I+ +L +QG E G L + K GD + + K Sbjct: 261 YNPMLPSIVKDLKKQGLAVENDGALVVYLDEFKNKD--------------GDPMGVIVQK 306 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY--------VKRLEAVAAAVSEKK 378 DG + Y D+A K +YE N V ++ V + S + Sbjct: 307 KDGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEH 366 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 ++L +DG P K R G + L ++DE Sbjct: 367 KNFGMMLG------KDGKPFKT--RTGGTVKLADLLDEAIERATVLINEKNTNLSNDEKE 418 Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VG +V++ L + + FD+ + + N Y+QYAY R RSIF + Sbjct: 419 AVIEAVGIGAVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNKT--- 474 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 D + P + D E L + L ++ ++ P+ L YLY+LA + Sbjct: 475 ----DINSTALLAAPLTIK-DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYELAGI 529 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + H + A + + + RL+L + GL ++G+++ +M Sbjct: 530 FSSFYEH------CPILNAEDESIKLSRLKLALLTEKTLKQGLTLLGIKTVEKM 577 >gi|253582251|ref|ZP_04859474.1| arginyl-tRNA synthetase [Fusobacterium varium ATCC 27725] gi|251835790|gb|EES64328.1| arginyl-tRNA synthetase [Fusobacterium varium ATCC 27725] Length = 570 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 131/589 (22%), Positives = 245/589 (41%), Gaps = 103/589 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G TN AM+ S+ +G +P TIA+ I+ ++ + +D + IAG GFIN++L YL ++L Sbjct: 39 GDFQTNFAMMNSKIIGKNPRTIAQEILDNLEENDVIDKLEIAGPGFINIFLKSKYLGEVL 98 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 EY + + + V I+F S N MH+GH R ++GD++ + + GY + Sbjct: 99 KKSRTE--EYDFSFLNREGDVIIDFSSPNIAKRMHIGHLRSTIIGDSITRIYKYLGYHMI 156 Query: 163 REYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYY------------PGVYLKHV 209 + +I D G Q L + W ++A N + E Y + Sbjct: 157 ADNHIGDWGTQFGKLIIGYRRWLDKEAYKENPIEELERVYVEFSKLSESNPELEEEARLE 216 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 K+L D + NF W +K S+ K+ K L++ D + E +H Sbjct: 217 LKKLQD---GDPENFA--LWKEFIK-VSLDEYDKL----YKRLDVHFDTYYGESFYH--- 263 Query: 270 PSPIRDIIDNLARQGYVYEG----ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 ++ +++ L +G E ++ P+ C + +K Sbjct: 264 -PMMQGVVEELVEKGLAVEDDGAKVVFFPEEDNLFPCIVQKK------------------ 304 Query: 326 KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 DG++ Y +D+A K K E + +IY+ + K+ + + + ++ Sbjct: 305 --DGAFLYSTSDIATIKFKKEAYKINKLIYLTDERQQDHFKQFFKITDMLGWNVEKHHIW 362 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 + + DG+ S R G+ I L ++DE + ++ KN +L + + ++ E Sbjct: 363 FG--IMRFADGV---FSTRKGNVIRLEQLLDE--GKKRAYDIVQEKNPDLSEEEKDQIAE 415 Query: 445 -------------QSKENPVF---------------YVQYAYARCRSIFRQAKDIFPDLD 476 Q++++P+ Y+QY+YAR +SI R+A+ + Sbjct: 416 VVGVGAIKYADLSQNRQSPIIFEWDKILTFEGNTAPYLQYSYARIQSILRKAESEGKSIT 475 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 +D I E D E L H+A +P + A+ +P +A YL++L+ F+ + Sbjct: 476 YD----KEIKIE---DKLERALANHIAAFPISVLKASETFKPNIIADYLFELSKKFNSFY 528 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P L +L R + I GL+++G+++ M Sbjct: 529 NSC---PILN----QEDELLYSRALIAKITGETIKDGLSLLGIKTLERM 570 >gi|330445483|ref|ZP_08309135.1| arginyl-tRNA synthetase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489674|dbj|GAA03632.1| arginyl-tRNA synthetase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 576 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 135/605 (22%), Positives = 241/605 (39%), Gaps = 127/605 (20%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-- 100 G N M +++ LG +P A+ ++ + +D + V IAG GFIN++L+ ++L + Sbjct: 37 GDYQANGVMGVAKKLGTNPREFAQKVIDCLDLDGIAEKVEIAGPGFINIFLNKAWLAERG 96 Query: 101 ---ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + E +N++ +++ + N MHVGH R ++GD + + F Sbjct: 97 EEALKDERLAVNTETAQNIV-------VDYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFL 149 Query: 158 GYEVTREYYINDAGAQ-------------------INTLALSVFWRYQQALYNNDSDLPE 198 G+ V R ++ D G Q +N L F+R + LY+ D++ E Sbjct: 150 GHNVIRANHLGDWGTQFGMLIANMQRKEKEGADVSMNISDLEGFYRESKVLYDEDAEFGE 209 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ--H 256 V G E + EKW + V+ +K + + LN+ Sbjct: 210 TARNFVVRLQSGDE-----------YCLEKWKQL-----VEITLKQNQRNYDRLNVSLTD 253 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D + E ++ P + D+ + +G+ T D + + Sbjct: 254 DNVMGESMYNDMLPGVVADLKE---------KGLAVESDGATVVYLDEYKNK-------D 297 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLE 368 G+ + + K DG Y Y D+A K +YE+ D ++Y + S + V++ Sbjct: 298 GEPMGVIIQKRDGGYLYTTTDIACAKYRYEQLHADRVLYFIDSRQHQHLMMAWEIVRKAG 357 Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428 V +VS + ++L +DG P K RAG + L ++DE + + ++ Sbjct: 358 YVPESVSLEHHAFGMMLG------KDGRPFKT--RAGGTVRLADLLDEAEERANK--LIE 407 Query: 429 RKNSEL-----------LDFDFCKVKEQSKE-----------------NPVFYVQYAYAR 460 KN EL + K + SK N Y+QYAY R Sbjct: 408 EKNPELSAEEKANIAQTVAMAAVKYSDLSKHRTTDYIFDWDNMLAFEGNTAPYMQYAYTR 467 Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520 SIF++A DL + VI D E L+ L ++ +++ +P+ Sbjct: 468 VASIFKRANVELADLTQPI----VIT-----DEKEQALLSKLLQFEEAVQSVAREGQPHL 518 Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + YL++LA +F + P L +A + RL+L A I GL+++G+E Sbjct: 519 MCTYLFELAGMFSSFYEAC---PILNADEATKQS----RLKLAMLTAKTIKQGLDLLGIE 571 Query: 581 SPNEM 585 + M Sbjct: 572 TLERM 576 >gi|227890475|ref|ZP_04008280.1| arginyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200] gi|227849044|gb|EEJ59130.1| arginyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200] Length = 558 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 148/602 (24%), Positives = 257/602 (42%), Gaps = 115/602 (19%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 ++IERP++ G + A L++ +P IA+ I +I D + S+ G ++N Sbjct: 24 MLIERPKNPKMGDYAF-PAFALAKIEHKNPALIAKNIAEKIS-DDNFASIQAVGP-YVNF 80 Query: 92 YLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + + L L+ ++ +G +G+G V I+ S N PM +GH R V+G+++ Sbjct: 81 AIDHAKLVNATLNDVLTEKEHFGDQKLGEGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSI 139 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV---YLK 207 A + GY + Y+ D G Q L + +R L+ N+ D+ + + Y+K Sbjct: 140 AKTLEKVGYTPIKINYLGDYGTQFGKLITA--YR----LWGNEEDVKKDPITNLFHYYVK 193 Query: 208 -HVGKELADKYSSE-------LLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNI 254 H E K E L N EE KW ++ S+Q +I K L + Sbjct: 194 FHEEAEKDPKLEDEGRAAFKKLENGDEEEIKLWKWF---REVSLQEFNRI----YKELGV 246 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 D + E F+ ++ ++D L +G + E S+ Q ++ Sbjct: 247 TFDSYNGEAFFN----DKMQPVVDELREKGLLEE-------SRGAQVVNL---------- 285 Query: 315 MVGDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 G+D + L LKSDGS Y DLA Y K +Y+ F +YV G + +G+ K+L+ V Sbjct: 286 --GEDENPALILKSDGSSLYMTRDLAAALYRKKEYD--FVMSLYVAGGEQTGHFKQLKQV 341 Query: 371 -----------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407 +S +K + V L ++++ ++ ++ + Sbjct: 342 LKKMGYDWSDNIHHIPFGLITQGGKKLSTRKGNV-VFLDQVLKDAVSLAEQQIEEKNPNL 400 Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFR 466 + V +VG +V F L + DFD + V+ + P YVQY AR +SI R Sbjct: 401 SNKKQVAHDVGVGAVVFHDLKNDRMDNFDFDLEEVVRFEGDTGP--YVQYTNARAQSILR 458 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 +A ++ D N D + LA++P ++E A+ EP +A Y Sbjct: 459 KAN---KEISMDNLSLN--------DDWSFAVAKALADFPAIVEKASEKFEPSIIAKYAL 507 Query: 527 DLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 DL+ F+ ++++ R E+ +L RL LV A + ++ L ++GV +P Sbjct: 508 DLSKKFNKYYANVRILDEDDQLN-----------ARLALVQATSIVLTEALRLLGVNAPK 556 Query: 584 EM 585 EM Sbjct: 557 EM 558 >gi|315179517|gb|ADT86431.1| arginyl-tRNA synthetase [Vibrio furnissii NCTC 11218] Length = 577 Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 138/585 (23%), Positives = 241/585 (41%), Gaps = 86/585 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG +P A+ ++ + +D IAG GFIN++LS +L K Sbjct: 37 GDYQANGVMGVAKQLGTNPREFAQKVIDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + + R + K + I ++ + N MHVGH R ++GD + + F G++ Sbjct: 97 DAALADE----RLGVAKEAQQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHK 152 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYS 218 V R +I D G Q L ++ R QQ +L E +Y K+L D Sbjct: 153 VIRANHIGDWGTQFGML-IANLERVQQESGEVSMELSDLEAFY------RESKKLYD--- 202 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 E F E +VK +Q D K L + + ++ ++ R + S RD + Sbjct: 203 -EDAEFAERARNYVVK---LQGGDAFCLDMWKKL-VDVTMIQNQRNYDRLNVSLTRDDVM 257 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335 + + GI+ K K + D D Q++F G+ + + K DG + Y Sbjct: 258 GESMYNDMLPGIVADLKEKGLAQED-DGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTT 316 Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387 D+A K +YE G D ++Y + S + V++ V V+ + ++L Sbjct: 317 TDIACAKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYVPEEVTLEHHAFGMMLG- 375 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------VGSD------------ 420 +DG P K RAG + L ++DE +G+D Sbjct: 376 -----KDGRPFKT--RAGGTVRLADLLDEAEERAKALIESKNPDLGADEKADIATTVAMA 428 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +V++ L + + FD+ + + N Y+QYAY R SIF +A + Sbjct: 429 AVKYADLSKHRTTDYVFDWDNML-AFEGNTAPYMQYAYTRVASIFAKA---------GVS 478 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 P N+ + E LI L ++ +++ + +P+ L YL++LA F + Sbjct: 479 PDNLTGDIKITEEKEKALIAKLLQFEEAVQSVSREGQPHILCSYLFELAGQFSSFYEA-- 536 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A + + RL+L A I GL+++G+++ M Sbjct: 537 ----CPILIAEDESVKQSRLKLAALTAKTIKQGLSLLGIKTLERM 577 >gi|254304104|ref|ZP_04971462.1| arginine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148324296|gb|EDK89546.1| arginine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 569 Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 139/581 (23%), Positives = 250/581 (43%), Gaps = 88/581 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AMI S+ +G +P IAE I ++ + IAG GFIN++LS Y I Sbjct: 39 GDYQCNFAMINSKIIGDNPRKIAEEIKNNFPYGDVIEKLEIAGPGFINIFLSDKY---IS 95 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 +SI G Y + + + KV ++F S N MH+GH R ++G+++ + F GY+V Sbjct: 96 NSIKKIGESYDFSFLNRKGKVIVDFSSPNIAKRMHIGHLRSTIIGESICRIYKFLGYDVV 155 Query: 163 REYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGK-----ELADK 216 + +I D G Q L + W ++A N + E VY+K + L D Sbjct: 156 ADNHIGDWGTQFGKLIVGYRNWLNKEAYEKNAIEELER----VYVKFSDEAEKDPSLEDL 211 Query: 217 YSSELLNFP--EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274 +EL EE+ + K++ +++ K K L+I D + E ++ ++ Sbjct: 212 ARAELKKVQDGEEENTKLWKEFITESL-KEYNKLYKRLDIHFDTYYGESFYNDMMADVVK 270 Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334 +++D + EG + D K LF + K DG+Y Y Sbjct: 271 ELVD--KKIAIDDEG---------AKVVFFDEKDNLFPCI---------VQKKDGAYLYS 310 Query: 335 AADLAYFKC-KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393 +D+A K K + MIY+ + + K++ + + + ++ ++R + Sbjct: 311 TSDIATVKFRKNTYDVNRMIYLTDARQQDHFKQVFKITDMLGWDIEKYHIWFG-IIR-FA 368 Query: 394 DGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMM 426 DG+ +S R G+ I L ++DE VG SV++ Sbjct: 369 DGI---LSTRKGNVIKLEELLDEAHSRAYDVVNEKNPNLSEEEKQNIAEVVGVSSVKYAD 425 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 L + + F++ K+ + N Y+ Y YAR +SI R+ + +L+ D+ I Sbjct: 426 LSQNKQSDIVFEWDKML-SFEGNTAPYLLYTYARIQSILRKVTEQNIELNEDI----EIK 480 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 E++F+ S L +L +P + A +P +A YLY+L+ + +++ P L Sbjct: 481 TENKFEKS---LATYLLAFPISVLKAAETFKPNLIADYLYELSKKLNSFYNNC---PIL- 533 Query: 547 FVQANNRKLTMM--RLQLVHAVASIINSGLNIIGVESPNEM 585 N+ + + R L+ ++ GL ++G+ N+M Sbjct: 534 -----NQDIETLKSRSLLIKKTGEVLKEGLELLGIPVLNKM 569 >gi|269128153|ref|YP_003301523.1| arginyl-tRNA synthetase [Thermomonospora curvata DSM 43183] gi|268313111|gb|ACY99485.1| arginyl-tRNA synthetase [Thermomonospora curvata DSM 43183] Length = 574 Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 147/604 (24%), Positives = 245/604 (40%), Gaps = 114/604 (18%) Query: 38 RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 R H ++AA+ L R LG +P IA +V R ++D V I+G GFINL L Sbjct: 29 RRSQHADYQSDAALALVRRLGGNPRDIAARVVERAELDDLCAKVEISGPGFINLTLDNGA 88 Query: 98 LRKILSSIVVSGIE-YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 L ++L+ V+G E G + +++ + N MHVGH R ++GD L+ + Sbjct: 89 LGRLLAE--VAGDERLGVARAEVAETITVDYSAPNAAKEMHVGHLRSTIIGDAAVRLLEW 146 Query: 157 SGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLP 197 G+ V R+ ++ D G L L+ F++ + ++ D Sbjct: 147 LGHTVIRQNHLGDWGTPFGMLVEHLLDIGEAEAAHELSVGDLNTFYQAARRKFDADPAFQ 206 Query: 198 EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257 E V L G E + L+ ++ +L + D L A + D Sbjct: 207 ERSRKRVVLLQSGDEATLRLWRMLITESQKYFLAVY-------------DRLGA-TLGPD 252 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 F E ++ + +++ LA G + E KC +F + +G Sbjct: 253 DFFGESYYN----DQLESVVEELAELGLLRE--------SEGAKC-------VFPAGFIG 293 Query: 318 DDVDRPL----LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG---SDHSGYVKRLEA 369 D +PL KSDG + Y A DLA + + + ++YV+G H G V + Sbjct: 294 RD-GKPLPLIVRKSDGGFGYAATDLATIRHRVRKLHATRLLYVVGLPQQLHLGMVFQTAR 352 Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429 A +++ ++ + L DG ++ RAG + L +++E S + ++ Sbjct: 353 EAGWLTDPVRAEHIGFGSV--LGSDGKILR--TRAGASVKLMDLLNEAVSRAS--AIIAE 406 Query: 430 KNSEL-------------------LDFDFCKVKE---------QSKENPVFYVQYAYARC 461 KN EL D +VK+ N Y+QYA AR Sbjct: 407 KNPELDEDARAAVARAVGIGAVKYADLSTDRVKDYVFDYDRMLSFDGNTAPYLQYARARI 466 Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 SIFR+ +I P D + R +I + +E L + L + +I E ++L Sbjct: 467 CSIFRKG-NIEPPRDVE---RVLIAE-----PAERALALQLLAFEGLINQVAQNLEFHRL 517 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 A YLY LA+ F + + +QA ++ RL L A + GLN++G+ES Sbjct: 518 AQYLYGLATAFTSFYEN------CPVLQAEG-EVRTSRLVLCDLTARTLERGLNLLGIES 570 Query: 582 PNEM 585 P++M Sbjct: 571 PDQM 574 >gi|307150379|ref|YP_003885763.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 7822] gi|306980607|gb|ADN12488.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 7822] Length = 585 Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 153/590 (25%), Positives = 237/590 (40%), Gaps = 103/590 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G +N A+ L++PL P IAE +V ++I + IAG GFIN L SYL + Sbjct: 40 GDYQSNVALSLAKPLKQSPRAIAEQLVKALEISDLCEPPQIAGPGFINFTLKRSYLENQI 99 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 S I+ G K+ I+F S N MHVGH R ++GD LA ++ F G+EV Sbjct: 100 S-ILQKDPRLGVEKAAPPQKIVIDFSSPNIAKEMHVGHLRSTILGDCLARILEFRGHEVL 158 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222 R ++ D G Q L + Y AL ++ L G Y K A E Sbjct: 159 RLNHVGDWGTQFGMLIAYLREVYPDALTTANA-LDLGDLVSFYKK------AKIRFDEDE 211 Query: 223 NFPEEKWLPIVK--------DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP--SP 272 F EE +VK ++ Q + + R + + + DI + E RG+ +P Sbjct: 212 TFKEEARQEVVKLQAGANDSGHAWQLLCEQSRREFQGIYDILDIKLVE----RGESFYNP 267 Query: 273 -IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDG 329 + I+ L QG + E D K + + PL+ KSDG Sbjct: 268 MLSGILTQLDEQGLLTE--------------DQGAKCVFLEGFTNKEGEPLPLIVQKSDG 313 Query: 330 SYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 Y Y DLA K + E+ +IYV + + + ++ VA KKA I E+ Sbjct: 314 GYNYATTDLAALKYRVEQDQATRIIYVTDAGQANHFAQVFQVA-----KKAGILPENVEV 368 Query: 389 VRLY------RDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416 V + DG K+ R+G+ I L+ ++DE Sbjct: 369 VHVAFGIVKGEDGK--KLKTRSGETIKLKDLIDEAIAHARRDLETRLSSDERTESQEFIN 426 Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VG ++++ L + F + K+ + N Y+ YAYAR +SI R+ Sbjct: 427 HVAQGVGISAIKYADLSQNRVSDYIFSYDKML-ALQGNTAPYMLYAYARVQSISREGNID 485 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVH--LAEYPRVIENATIAQEPYKLAFYLYDLA 529 F LD S T E +L++ L + VI++ P +L YLY+L+ Sbjct: 486 FNQLD---------EGASVLLTEEAELVLSKCLLQLTEVIQDVERDLLPNRLCEYLYELS 536 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 F+ + P L+ + + RL L A + GL ++G+ Sbjct: 537 KKFNKFYETC---PVLK----SEDPIKTSRLILCDLTAKTLKLGLFLLGI 579 >gi|319654711|ref|ZP_08008790.1| arginyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2] gi|317393627|gb|EFV74386.1| arginyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2] Length = 562 Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 143/595 (24%), Positives = 249/595 (41%), Gaps = 102/595 (17%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IE P++ AHG L+ L++ P +IA I+ P ++ AG +IN++ Sbjct: 28 LIETPKNPAHGDLAF-PCFTLAKAFRKSPASIAGETACLIQ-GPHIEKAEAAGP-YINIF 84 Query: 93 LSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 S S I+ I+ G EYG+ G G ++F S N P +GH R V+G+ L Sbjct: 85 FSKESAGAVIMEKILNEGKEYGQLNDGAGKTAVLDFSSPNIAKPFSMGHLRSTVIGNALG 144 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE------GYYPGVY 205 SL GY R ++ D G Q L ++ + ++ ++ + E ++ Sbjct: 145 SLAEKCGYTAVRINHLGDWGTQFGKL-ITAYTKWGSPDKVKENPIKELLSLYIRFHEEAE 203 Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD-LKALNIQHDIFISEDD 264 ++ A + EL N E+ QA+ R++ LK +D+ D Sbjct: 204 ANPALEDEARSWFKELENGNEQ----------AQALWSWFREESLKEFQRVYDMLGIHFD 253 Query: 265 FHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 + G+ + +I+ L + + E ++ Q D D L + Sbjct: 254 SYNGEAFYNDKMEPVIEELMAKDLLAES----DGAEVVQLPDEDLPPCLIK--------- 300 Query: 322 RPLLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378 KSDG+ Y DLA Y K Y+ FD+ +Y++G + S + +++++V + + Sbjct: 301 ----KSDGATLYATRDLAAAFYRKETYQ--FDHSLYIVGQEQSIHFRQVKSVIKKMGYEW 354 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 A N+ +DG KMS R G I L V++E Sbjct: 355 AD-NMTHVPFGLYLKDGK--KMSTRKGRVILLEEVLNEAILLAKTNIEAKNPGLENKDEV 411 Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 VG ++ F L KN + + +F + + + P Y+QY AR S+ R+A D Sbjct: 412 AEAVGIGAILFHDL--KNDRMNNIEFSLEDMLTFEGETGP--YLQYTNARAYSLLRKADD 467 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 I P + L D+ ++I L +YP I + + P LA YL D+A Sbjct: 468 I-PSAENGLS-----------DSYSWEIIKLLYQYPEKIRQSYMQLSPSVLAKYLIDVAQ 515 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ ++ ++R ++ +N RL LV AV +++ G+ +G++ P +M Sbjct: 516 AFNKYYG------QVRILEKDNS--IKSRLALVKAVTIVLSDGMQTLGMKVPRQM 562 >gi|145637830|ref|ZP_01793478.1| arginyl-tRNA synthetase [Haemophilus influenzae PittHH] gi|145268973|gb|EDK08928.1| arginyl-tRNA synthetase [Haemophilus influenzae PittHH] Length = 577 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 139/594 (23%), Positives = 237/594 (39%), Gaps = 104/594 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LGL+P A+ ++ ++ + + IAG GFIN++L+P++L + Sbjct: 37 GDYQANGIMAAAKKLGLNPREFAQKVLDNAQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 S+ +S G K T V I++ S N MHVGH R ++GD +A + F G+ V Sbjct: 97 SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220 R ++ D G Q L + Q + ++ +L E +Y A K+ E Sbjct: 155 RANHVGDWGTQFGMLI--AYLEKMQHEHASEMELQDLEAFY----------REAKKHYDE 202 Query: 221 LLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNIQH-----DIFISEDDFHRGDP- 270 F E+ +VK D + M K + D N QH ++ ++E D G+ Sbjct: 203 DEIFAEKARNYVVKLQSGDEYCRTMWKRLVDITMQQN-QHNYDRLNVTLTEKDV-MGESL 260 Query: 271 -SP-IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 +P + I+++L +QG E G L + K GD + + K Sbjct: 261 YNPMLPSIVEDLKKQGLAVEDDGALVVYLDEFKNKD--------------GDPMGVIVQK 306 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY--------VKRLEAVAAAVSEKK 378 DG + Y D+A K +YE N V ++ V + S + Sbjct: 307 KDGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEH 366 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 ++L +DG P K R G + L ++DE Sbjct: 367 KNFGMMLG------KDGKPFKT--RTGGTVKLADLLDEAIERATVLINEKNTNLSNDEKE 418 Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VG +V++ L + + FD+ + + N Y+QYAY R RSIF + Sbjct: 419 AVIEAVGIGAVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNKT--- 474 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 D + P + D E L + L ++ ++ P+ L YLY+LA + Sbjct: 475 ----DINSTALLAAPLTIK-DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYELAGI 529 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + H + A + + + RL+L + GL ++G+++ +M Sbjct: 530 FSSFYEH------CPILNAEDESIKLSRLKLALLTEKTLKQGLTLLGIKTVEKM 577 >gi|260767651|ref|ZP_05876586.1| arginyl-tRNA synthetase [Vibrio furnissii CIP 102972] gi|260617160|gb|EEX42344.1| arginyl-tRNA synthetase [Vibrio furnissii CIP 102972] Length = 577 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 138/585 (23%), Positives = 241/585 (41%), Gaps = 86/585 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG +P A+ ++ + +D IAG GFIN++LS +L K Sbjct: 37 GDYQANGVMGVAKQLGTNPREFAQKVIDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + + R + K + I ++ + N MHVGH R ++GD + + F G++ Sbjct: 97 DAALADE----RLGVAKEAQQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHK 152 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYS 218 V R +I D G Q L ++ R QQ +L E +Y K+L D Sbjct: 153 VIRANHIGDWGTQFGML-IANLERVQQESGEVSMELSDLEAFY------RESKKLYD--- 202 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 E F E +VK +Q D K L + + ++ ++ R + S RD + Sbjct: 203 -EDAEFAERARNYVVK---LQGGDAFCLDMWKKL-VDVTMIQNQRNYDRLNVSLTRDDVM 257 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFA 335 + + GI+ K K + D D Q++F G+ + + K DG + Y Sbjct: 258 GESMYNDMLPGIVADLKEKGLAQED-DGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTT 316 Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCE 387 D+A K +YE G D ++Y + S + V++ V V+ + ++L Sbjct: 317 TDIACAKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYVPEEVTLEHHAFGMMLG- 375 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------VGSD------------ 420 +DG P K RAG + L ++DE +G+D Sbjct: 376 -----KDGRPFKT--RAGGTVRLADLLDEAEERAKALIESKNPDLGADEKADIATTVAMA 428 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +V++ L + + FD+ + + N Y+QYAY R SIF +A + Sbjct: 429 AVKYADLSKHRTTDYVFDWDNML-AFEGNTAPYMQYAYTRVASIFAKA---------GVS 478 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 P N+ + E LI L ++ +++ + +P+ L YL++LA F + Sbjct: 479 PDNLTGDIKITEEKEKALIAKLLQFEEAVQSVSREGQPHILCSYLFELAGQFSSFYEA-- 536 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A + + RL+L A I GL+++G+++ M Sbjct: 537 ----CPILIAEDESVKQSRLKLAALTAKTIKQGLSLLGIKTLERM 577 >gi|197334256|ref|YP_002155601.1| arginyl-tRNA synthetase [Vibrio fischeri MJ11] gi|238690276|sp|B5FC42|SYR_VIBFM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|197315746|gb|ACH65193.1| arginyl-tRNA synthetase [Vibrio fischeri MJ11] Length = 577 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 136/600 (22%), Positives = 231/600 (38%), Gaps = 116/600 (19%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG +P A+ ++ + +D IAG GFIN++LS +L K Sbjct: 37 GDYQANGVMGVAKRLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + + R + K + NI ++ + N MHVGH R ++GD + + F G+ Sbjct: 97 EAALADK----RLGVAKEEQQNIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHN 152 Query: 161 VTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGYY 201 VTR +I D G Q L L F+R + LY+ D + Sbjct: 153 VTRANHIGDWGTQFGMLIANLERIQKEKGEVSMELSDLEGFYRESKKLYDEDEEFAVTAR 212 Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 V G E F E W +V VQ R + +++ D + Sbjct: 213 GYVVKLQSGDE-----------FCAEMWKKLVDVTMVQNQRNYDRLN---VSLTRDNVMG 258 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E ++ S + I+ +L +QG E S+ Q +D + G+ + Sbjct: 259 ESMYN----SMLAPIVADLQKQGLAVE-------SEGAQVVFLDEYK-----NKDGEPMG 302 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAA 373 + K DG + Y D+A K +YE D ++Y + S + V++ V + Sbjct: 303 VIVQKRDGGFLYTTTDIACAKYRYEELNADRVLYFIDSRQHQHLMQAWTIVRKAGYVPES 362 Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433 VS + ++L +DG P K RAG + L ++DE + + ++ KN + Sbjct: 363 VSLEHHAFGMMLG------KDGRPFKT--RAGGTVRLADLLDEAEERAAK--LIEEKNKD 412 Query: 434 LLDFDFCKV---------------KEQSKE-------------NPVFYVQYAYARCRSIF 465 L + K+ K ++ + N Y+QYAY R SIF Sbjct: 413 LPAEEKAKIATTVAMAAVKYSDLSKHRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVASIF 472 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 +A L D V D E L+ L ++ ++ +P+ + YL Sbjct: 473 SKA-----GLSMDELTGEVKIT----DEKEKALVAKLMQFEEAVQAVASEGQPHLMCAYL 523 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++LA F + + + + RL+L A I GL ++G+E+ M Sbjct: 524 FELAGQFSSFYEA------CPILNNEDDAVKQSRLKLAALTAKTIKQGLELLGIETLERM 577 >gi|328473382|gb|EGF44230.1| arginyl-tRNA synthetase [Vibrio parahaemolyticus 10329] Length = 577 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 137/603 (22%), Positives = 237/603 (39%), Gaps = 122/603 (20%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-- 100 G N M +++ LG +P A+ ++ + ++ IAG GFIN++LS +L K Sbjct: 37 GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLNGIASKTEIAGPGFINIFLSEEFLAKQA 96 Query: 101 ---ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + S + E + ++ ++ + N MHVGH R ++GD + + F Sbjct: 97 DAALADSRLGVAAEEAQTIVA-------DYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFL 149 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYY-PGVYLKHVGKELA 214 G++V R +I D G Q L ++ R QQ +L EG+Y L +E A Sbjct: 150 GHKVIRANHIGDWGTQFGML-IANLERVQQESGEVSMELADLEGFYRESKKLYDEDEEFA 208 Query: 215 DKYSSELL------NFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNIQHDIFIS 261 K + ++ F E W +V +Q + + RDD+ ++ +D+ Sbjct: 209 VKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESMYNDM--- 265 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GD 318 + I+ +L QG E D Q++F G+ Sbjct: 266 -----------LPKIVADLKAQGLAVED---------------DGAQVVFLEEFKNKDGE 299 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370 + + K DG + Y D+A K +YE G D ++Y + S + V++ V Sbjct: 300 AMGVIVQKRDGGFLYTTTDIACAKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYV 359 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430 +VS + ++L +DG P K RAG + L ++DE + + ++ K Sbjct: 360 PESVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRAAQ--LIESK 409 Query: 431 NSEL-----------LDFDFCKVKEQSKE-----------------NPVFYVQYAYARCR 462 N EL + K + SK N Y+QYAY R Sbjct: 410 NPELDAEEKEKISKTVAMAAVKYSDLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVA 469 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 SIF +A +L D+ D E LI L ++ +++ +P+ + Sbjct: 470 SIFAKAGVAMDELQGDI---------QITDEKEKALIAKLLQFEEAVQSVAREGQPHIMC 520 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 YL++LA F + + A + + RL+L A I GL+++G+E+ Sbjct: 521 SYLFELAGQFSSFYEA------CPILVAEDEAVKQSRLKLAALTAKTIKQGLSLLGIETL 574 Query: 583 NEM 585 M Sbjct: 575 ERM 577 >gi|260103236|ref|ZP_05753473.1| arginine-tRNA ligase [Lactobacillus helveticus DSM 20075] gi|260082949|gb|EEW67069.1| arginine-tRNA ligase [Lactobacillus helveticus DSM 20075] Length = 561 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 142/599 (23%), Positives = 252/599 (42%), Gaps = 108/599 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IERP++ G + A IL++ L +P IA+ I + D + S+ G ++N Sbjct: 25 LIERPKNAKMGDYAF-PAFILAKTLRKNPAMIAQDIAENLSSD-NFASIKAVGP-YVNFA 81 Query: 93 LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + L L I+ YG G+G + I+ S N PM +GH R V+G+++A Sbjct: 82 IDHEKLVSSTLKDILSEKEHYGDQKFGEGN-IPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 M GY + Y+ D G Q L + Y+ + N+ D+ + ++ +V Sbjct: 141 KTMEKVGYTPIKINYLGDYGTQFGKLIAA----YKH--WGNEEDVKKDPIMNLFHYYV-- 192 Query: 212 ELADKYSSELLNFPE-----EKWLPIVKDYSVQA--MMKIIR----DDL----KALNIQH 256 ++ E N PE +W ++D +A + K R +D K L + Sbjct: 193 ----RFHKEAENNPELDDEGREWFKKLEDGDPEAVKLWKWFREVSLEDFKRIYKELGVTF 248 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D + E F+ ++ +ID L +G ++E S+ Q DM Sbjct: 249 DSYNGEAFFN----DKMQPVIDELKEKGLLHE-------SRGAQVVDMGP---------- 287 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV----- 370 D+ ++KSDG+ Y DLA + + E F M+YV+G++ + + L+ V Sbjct: 288 -DENPAIIVKSDGTSIYLTRDLAAAEWRMKEYNFVKMLYVVGNEQAQHFVELKTVLKKMG 346 Query: 371 ------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412 +S +K + V L ++++ ++ ++ D Sbjct: 347 YDWSDEIHHVPFGLITQGGKKLSTRKGNV-VFLDQVLKDAISLAKKQIEEKNPDLADKDQ 405 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAK 469 V +VG +V F L KN L +FDF V+ + P YVQY AR +S+ R+A Sbjct: 406 VAHDVGVGAVIFHDL--KNDRLDNFDFDLDEVVRFEGDTGP--YVQYTNARAQSVLRKAA 461 Query: 470 DIFPDLDFDLFPRNVIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 + E +F D + LA++PR+I + EP +A + Sbjct: 462 AMGEKR-----------SEGDFALDDDWAFAVAKDLADFPRIIARSADKFEPSVIAKFAL 510 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 DLA F+ ++++ ++ + +++ RL LV A + ++ L ++GV +P EM Sbjct: 511 DLAKKFNKYYAN------VKILTKDDK--IGARLALVQATSIVLTEALRLLGVNAPKEM 561 >gi|226946552|ref|YP_002801625.1| arginyl-tRNA synthetase [Azotobacter vinelandii DJ] gi|259511638|sp|C1DHR7|SYR_AZOVD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|226721479|gb|ACO80650.1| arginyl-tRNA synthetase [Azotobacter vinelandii DJ] Length = 579 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 136/575 (23%), Positives = 233/575 (40%), Gaps = 91/575 (15%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E +D +HG ++N AM+L++P GL P +AE +VA + D V V IAG GF+N Sbjct: 30 IQVENTKDKSHGDFASNIAMMLAKPAGLKPRQLAEKLVAALPADASVSKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + L + L + ++ G G +V ++ S N MHVGH R ++GD +A Sbjct: 90 FQNSDALARRL-EVALADERLGVRKHGDLQRVVVDLSSPNLAKEMHVGHLRSTIIGDAVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ F G V R+ ++ D G Q L L+ + + +DL + Y Sbjct: 149 RVLEFLGDVVIRQNHVGDWGTQFGML-LAHLEEKPASAESELADLEQFY----------- 196 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263 A K E F + +V+ + + + A+++ H + ++ D Sbjct: 197 RAAKKRFDESEAFADRARELVVRLQAGEPECLRLWQRFNAISLSHCQEVYERLGVRLTPD 256 Query: 264 DFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 D RG+ + + I+ L +G + E S+ Q +D FR+ G+ + Sbjct: 257 DI-RGESAYNDELPGIVQALRDKGLLTE-------SEGAQCVFLDE----FRNAE-GNPL 303 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAV---AAAVSE 376 + K+ G Y Y DLA + + + D ++Y + + + + AV A V + Sbjct: 304 PVIVQKAGGGYLYATTDLASMRYRSQVLKADRVLYFVDQRQALHFQMTFAVARRAGFVRD 363 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416 A ++ + DG P K R G + L ++DE Sbjct: 364 DTALEHMGFGTMNGA--DGRPFKT--RDGGTVKLIDLLDEAEQRAYALVKGKNPELPEEE 419 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 VG +V++ L + + F+F ++ + N Y+ YAY R S+FR+ Sbjct: 420 LRHIARAVGIGAVKYADLSKHRTSDYSFNF-ELMLSFEGNTAPYLLYAYTRVASVFRKLG 478 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 ++D P EL L LA++ V+ N P+ L YLYDLA Sbjct: 479 REIDEIDGSPAPEA---------GQELALAARLAQFGEVLGNVAEKGLPHLLCAYLYDLA 529 Query: 530 SVFHGHWSH---------GRENPRLRFVQANNRKL 555 +F + + R+ RL R L Sbjct: 530 GLFSSFYENCPILTADTPARQQSRLLLAALTGRTL 564 >gi|284929097|ref|YP_003421619.1| arginyl-tRNA synthetase [cyanobacterium UCYN-A] gi|284809556|gb|ADB95261.1| arginyl-tRNA synthetase [cyanobacterium UCYN-A] Length = 584 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 148/604 (24%), Positives = 256/604 (42%), Gaps = 110/604 (18%) Query: 38 RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 +D H N A L++ L P I+++I+ + + P ++ I G GFINL + Y Sbjct: 35 KDTRHADYQVNIAFSLAKKLKKKPQEISQIIIGNLPVSPVYETPSIGGPGFINLRIKKGY 94 Query: 98 LR---KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154 L K+L GI N K+ ++F S N MHVGH R ++GD+L+ ++ Sbjct: 95 LEDQIKLLCEDERLGILKTHN----SQKIIVDFSSPNIAKEMHVGHLRSTIIGDSLSRIL 150 Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVG 210 F G+++ R ++ D G Q L + + ALY + DL Y Sbjct: 151 EFIGHDILRLNHVGDWGTQFGMLISYLKEVFPNALYEANVLQIEDLVSFYRK-------- 202 Query: 211 KELADKYSSELLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 A K E + F E +VK + +A + + + +DI E Sbjct: 203 ---AKKRFDEDIQFQEISREAVVKLQLGNEEYRKAWKLLCEQSRREFQVIYDILQIELT- 258 Query: 266 HRGDP--SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDD 319 RG+ +P + +I+++L +Q + + KC +F + G+ Sbjct: 259 ERGESFYNPFLEEIVNDLDKQKIL--------EISDGAKC-------VFLEGFINKSGNP 303 Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFD---NMIYVMGSDHSGYVKRLEAVA--AAV 374 + + KSDG Y Y DLA KY D ++IYV + S + ++ +A A Sbjct: 304 LPLIVQKSDGGYNYATTDLAAL--KYRINIDKAKHIIYVTDAGQSNHFAQVFQIAQRAGF 361 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 ++ ++ + LV+ DG K+ R+G+ I L+ ++D+ Sbjct: 362 LREETSVSHIPFGLVK-GEDGK--KLKTRSGETIRLKDLLDKSIYQARKNLENRLKTENR 418 Query: 417 -------------VGSDSVRFMMLWR-KNSELLDFDFCKVKEQS-KENPVFYVQYAYARC 461 VG SV++ L + +NS D+ F K S + N Y+ YAYAR Sbjct: 419 EESQEFINNVANVVGIGSVKYADLSQNRNS---DYIFSYDKMLSLQGNTAPYMLYAYARI 475 Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 +SI R+ K + L+ + ++ E+E D + + ++ L E +IEN + P +L Sbjct: 476 KSILREEKINYAALE---NTQVILQDEAEIDLA--KYLLQLNEVIEIIENTLL---PNRL 527 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 YLY+L+ F+ + + P L+ V + RL L A + GL+++G++ Sbjct: 528 CEYLYELSKRFNRFYENC---PVLKSVDSTK----FSRLVLCDLTARTLELGLSLLGIDV 580 Query: 582 PNEM 585 M Sbjct: 581 LERM 584 >gi|290890974|ref|ZP_06554038.1| hypothetical protein AWRIB429_1428 [Oenococcus oeni AWRIB429] gi|290479373|gb|EFD88033.1| hypothetical protein AWRIB429_1428 [Oenococcus oeni AWRIB429] Length = 572 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 144/596 (24%), Positives = 257/596 (43%), Gaps = 97/596 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFINL 91 ++E+P+ +G + LS+ L P +A I R+ K D + + + G +IN Sbjct: 31 LVEKPKMLKNGDYAF-PVFGLSKIFHLSPDQVAFSIYNRLNKSDTNFEKIEHNG-AYINF 88 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +L L S +++ YG+N G + +E S N PM +GH R ++G++L+ Sbjct: 89 FLDRKREASTLISDIINNDSYGKNNAGNKKTIIVELSSPNIAKPMSMGHLRSTMIGESLS 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLK-HV 209 + +GY+ + ++ D G Q + + W + + N D Y + + Sbjct: 149 RIANENGYKTIKINHLGDWGTQFGLMIEAYKLWGNKDIIEQNPVDELVKLYVRINKEAET 208 Query: 210 GKELADKYSSELLNF----PEE----KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 EL++ S PE KW K+ S++ K+ + L + D Sbjct: 209 NPELSEAGRSWFKKLEDGDPEARELWKWF---KNVSLREFNKV----YQRLGVTFDSMNG 261 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E F++ S I D++ N +GIL +S+ Q D+ + + Sbjct: 262 ES-FYQDKMSVIIDLLKN--------KGILT--ESRGAQIVDLPSLLPAYNLPV------ 304 Query: 322 RPLLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378 +L+SDG+ Y DLA Y + Y FD +YV+G++ Y K+++A+ K Sbjct: 305 SIILRSDGATQYATRDLATAFYRQTTYH--FDKCLYVVGAEQKEYFKQIKAIL-----KL 357 Query: 379 AQINVLLCELVRLYRDGMPI---KMSKRAGDFITLRHVVD-------------------- 415 A N ++ +Y + KMS R G+ + L V+D Sbjct: 358 AGFN-WSDDMEHIYFGLITFNGKKMSTRKGNVVKLEQVLDSAHKLAKNQIAEKNPNLSNS 416 Query: 416 -----EVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAK 469 +VG+ +V F L + +DFD + VK + P YVQY + R SI R++ Sbjct: 417 DKVAEQVGTGAVIFNDLMNDRTLSIDFDLDQIVKFEGDTGP--YVQYTHVRAVSILRKSS 474 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 I D++ + D ++ L+ YP +++ A I +EP +A YL +LA Sbjct: 475 -IKIDINDAI---------KLLDNDSWAVVSKLSVYPDIVKRAWILREPSIIAKYLLNLA 524 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ ++S + +++L+ RL LV AVA ++ GL ++ V++P++M Sbjct: 525 HEFNSYYSKVH-------ILVEDKQLS-SRLALVDAVAIVLKKGLELLDVQAPDQM 572 >gi|291617771|ref|YP_003520513.1| ArgS [Pantoea ananatis LMG 20103] gi|291152801|gb|ADD77385.1| ArgS [Pantoea ananatis LMG 20103] Length = 576 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 136/597 (22%), Positives = 235/597 (39%), Gaps = 111/597 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG P +AE ++ + + V IAG GFIN++L +L Sbjct: 37 GDYQANGIMAVAKKLGQAPRQLAETVIQHLDLTGIASKVEIAGPGFINIFLDRGWL---- 92 Query: 103 SSIVVSGIEYGRNLIG---------KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 E+ RN + + + +++ + N MHVGH R ++GD Sbjct: 93 -------AEHARNALQHPRLGVACVEPQTIVVDYSAPNVAKEMHVGHVRSTIIGDAAVRT 145 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 +AF G+ V R ++ D G Q L F QQ N +++ G Y + Sbjct: 146 LAFLGHNVIRANHVGDWGTQFGMLI--AFLEKQQN--ENHAEMALADLEGFYRE------ 195 Query: 214 ADKYSSELLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDD--FH 266 A + E F E +VK DY Q K++ DI +S++ + Sbjct: 196 AKRTYDEDPEFAERARRYVVKLQGGDDYCRQMWKKLV-----------DITMSQNQHIYD 244 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF---RSTMVGDDVDRP 323 R + + R + + + GI+ K+K + + ++F G+ + Sbjct: 245 RLNVTLTRKDVMGESLYNDMLPGIVADLKAKGL-AVESEGATVVFLDEYQNKEGEPMGVI 303 Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVS 375 + K DG Y Y D+A K +YE D +IY + S + V++ V +V Sbjct: 304 IQKKDGGYLYTTTDIACAKYRYETLHADRVIYYIDSRQHQHLQQAWTIVRKAGYVPESVP 363 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416 + ++L +DG P K R+G I L ++DE Sbjct: 364 LEHHAFGMMLG------KDGRPFKT--RSGGTIKLSDLLDEAYDRAYSLVSEKNPEMSEE 415 Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG +V++ L + + FD+ + + N Y+QYAY R S+FR+A Sbjct: 416 ERRALAEVVGVSAVKYADLSKSRTTDYIFDWDNMLA-FEGNTAPYMQYAYTRVLSVFRKA 474 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 ++ D ++ + D E L L ++ VI P+ + YLYD+ Sbjct: 475 -----GIEADAIQADI----TLTDDREALLATRLLQFEEVITQVARDGTPHVMCAYLYDV 525 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A +F G + H + A + RLQ+ A + GL+ +G+++ + M Sbjct: 526 AGLFSGFYEH------CPILAAEDEATRQSRLQIAALTAKTLKLGLDTLGIKTVDRM 576 >gi|148978252|ref|ZP_01814770.1| arginyl-tRNA synthetase [Vibrionales bacterium SWAT-3] gi|145962553|gb|EDK27830.1| arginyl-tRNA synthetase [Vibrionales bacterium SWAT-3] Length = 577 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 130/604 (21%), Positives = 235/604 (38%), Gaps = 124/604 (20%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG +P A+ ++ + +D V IAG GF+N++L ++L K Sbjct: 37 GDYQANGVMGVAKRLGTNPREFAQKVLDVLNLDGIASKVEIAGPGFLNIFLDEAFLAKQA 96 Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 + + G+ + + ++ + N MHVGH R ++GD + + F G+ Sbjct: 97 DAALADSRLGV-----AAAEAQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGH 151 Query: 160 EVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGY 200 +V R +I D G Q L L F+R + LY+ D + Sbjct: 152 KVIRANHIGDWGTQFGMLIANLERVQAESGEVSMELADLEGFYRESKKLYDEDEEFAVKA 211 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 V G E F E W +V +Q Sbjct: 212 RGYVVKLQSGDE-----------FCAEMWKKLVDVTMIQ--------------------- 239 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR---STMVG 317 ++ ++ R + S RD + + ++ GI+ K + K D D Q++F G Sbjct: 240 NQRNYDRLNVSLTRDDVMGESMYNHMLPGIVADLKEQGLAKED-DGAQVVFLDEYKNKDG 298 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEA 369 D + + K DG + Y D+A K ++E G D ++Y + S + V++ Sbjct: 299 DPMGVIIQKRDGGFLYTTTDIACAKYRFEELGADRVLYFIDSRQHQHLMQAWTIVRKAGY 358 Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429 + +VS + ++L +DG P K RAG + L ++DE + + ++ Sbjct: 359 IPESVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRAAQ--LIES 408 Query: 430 KNSELLD--------------FDFCKVKEQSKENPVF--------------YVQYAYARC 461 KN EL + + + + + VF Y+QYAY R Sbjct: 409 KNPELAEDEKKAIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRV 468 Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 S+F +A L+ ++ I +E E LI L ++ +++ +P+ + Sbjct: 469 ASVFAKAGVSMDSLEGEI----KITEE-----KEKALIAKLLQFEEAVQSVAREGQPHIM 519 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 YL++LA F + + A + + RL+L A I GL+++G+E+ Sbjct: 520 CSYLFELAGQFSSFYE------ACPILIAEDEAVKQSRLKLAALTAKTIKQGLSLLGIET 573 Query: 582 PNEM 585 M Sbjct: 574 LERM 577 >gi|300173164|ref|YP_003772330.1| arginyl-tRNa synthetase [Leuconostoc gasicomitatum LMG 18811] gi|299887543|emb|CBL91511.1| arginyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811] Length = 563 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 141/590 (23%), Positives = 250/590 (42%), Gaps = 91/590 (15%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +E P+ G ++ L++ L P IA IVA+I + V G ++N +L Sbjct: 27 LETPKSSEMGDVAF-PTFTLAKVLHQAPQQIATDIVAKIN-QTGFEKVVAIGP-YVNFFL 83 Query: 94 -SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 P KIL I+ +G N G G V I+ S N PM +GH R V+G+ LA+ Sbjct: 84 DKPVTSGKILRLILKEQSHFGSNTDGNGNNVTIDMSSPNIAKPMSMGHLRSTVIGNALAN 143 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 + A +GY + ++ D G Q L Y + +++++ P L E Sbjct: 144 ITAKNGYVPVKINHLGDWGTQFGKLI------YAYKTWGSETEVKAD--PIATLLRYYVE 195 Query: 213 LADKYSSE-LLNFPEEKWLPIVKDYSVQA--MMKIIR-DDLKALNIQHD-IFISEDDFHR 267 +K ++ LN W ++D +A + + R + LK +D + I+ D F+ Sbjct: 196 FHEKAKNDDTLNDAGRAWFKKLEDGDSEAHQLWQWFRAESLKEFTAIYDRLDITFDSFN- 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + ++D L +G + S+ + D+ M+ Sbjct: 255 GEAFYNDKMAKVVDVLEEKGLLVS-------SQGAKIVDLSAINSSLTPAMIK------- 300 Query: 325 LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381 +SDG+ Y DLA Y K Y F +YV+G + + +++AV + + A Sbjct: 301 -RSDGATLYMTRDLAAAVYRKETYH--FSKSLYVVGGEQREHFVQMKAVLSLMGFTWAD- 356 Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------------------------E 416 +V + +G KMS R GD + L+ V+D + Sbjct: 357 DVEHISFGLITFNGK--KMSTRKGDVVLLKDVLDDAHELALKQIQEKNPALENKNIVAEQ 414 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKV-KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 VG+ +V F L + DF+ +V + + P YVQY AR +SI R++ D Sbjct: 415 VGAGAVVFHDLMNDRTNNFDFNLEEVVRFEGDTGP--YVQYTNARAKSILRKSGVTIVDQ 472 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + DL D + ++ L +P ++ A +E +A Y +L+ F+ + Sbjct: 473 NLDLD-----------DVATWDIVTILNSFPETVQRAWQQREASIVAKYALNLSRSFNRY 521 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++ + + N+++L RL LV +V+ +++ L ++GV+SP EM Sbjct: 522 YANSK-------ILTNDQQLNA-RLALVQSVSIVLSESLRLLGVKSPEEM 563 >gi|332289781|ref|YP_004420633.1| arginyl-tRNA synthetase [Gallibacterium anatis UMN179] gi|330432677|gb|AEC17736.1| arginyl-tRNA synthetase [Gallibacterium anatis UMN179] Length = 575 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 137/589 (23%), Positives = 247/589 (41%), Gaps = 81/589 (13%) Query: 36 RPRDCAH-GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS 94 RP A G N M ++ L + P +A+ +V + + ++ V IAG GFIN++L+ Sbjct: 29 RPSSKAQFGDYQANGVMAAAKKLAMPPRDLAQKVVENLDLGEMIEKVEIAGPGFINIFLN 88 Query: 95 PSYLRKILSSIVVSGIEYGRNLIG--KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 P++L + ++ LI K + ++ + N MHVGH R ++GD + Sbjct: 89 PAWLATQTNKMLADH----HFLIAPVKAQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVR 144 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGK 211 + F G+ V R ++ D G Q + Y + + N N SD+ Y + Sbjct: 145 TLEFVGHNVIRANHVGDWGTQ-----FGMLIAYLEKMQNENASDMELSDLEAFYRE---- 195 Query: 212 ELADKYSSELLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 A K+ E F E+ +VK +Y + K++ +K ++ ++ Sbjct: 196 --AKKHYDEDEVFAEKARGYVVKLQGGDEYCRKMWRKLVDITMKQ---------NQRNYD 244 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323 R + + + + + GI+ ++K D D ++F + GD + Sbjct: 245 RLNVTLTDKDVMGESLYNPMLPGIVADLEAKGLAVKD-DGAVVVFLNEFKNKEGDPLGVI 303 Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVS 375 + K DG Y Y D+A K +YE D ++Y S S + V++ V +V+ Sbjct: 304 IQKKDGGYLYATTDIACAKYRYETLHADRILYFTDSRQSQHLQQVWLIVRKAGYVPESVT 363 Query: 376 EKKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFITLR----------HVVDE 416 ++L + + + R G +K++ +RA I+ + V + Sbjct: 364 WDHFNFGMMLGKDNKPFKTRTGGTVKLADLLDEAVERAEKLISEKSTNLSAEEQHQVAEV 423 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG +V++ L + + FD+ + + N Y+QYAY R RSIF + Sbjct: 424 VGIGAVKYADLSKNRTTDYVFDWDNML-TFEGNTAPYIQYAYTRIRSIFANS-------- 474 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 + P+ + + D E QL + L ++ I P+ L YLYDLA F + Sbjct: 475 -GIDPQQLAGEIQIKDDKERQLALTLLKFEEAINTVVKEGTPHVLCAYLYDLAGAFSSFY 533 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H P L QA K + RL+L A ++ GL+++G+++ +M Sbjct: 534 EHC---PILN--QAEEVKQS--RLKLAALTAKVLKQGLDLLGIKTVEKM 575 >gi|312865751|ref|ZP_07725973.1| arginine--tRNA ligase [Streptococcus downei F0415] gi|311098626|gb|EFQ56848.1| arginine--tRNA ligase [Streptococcus downei F0415] Length = 563 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 142/590 (24%), Positives = 253/590 (42%), Gaps = 89/590 (15%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ + G L+ L++ L P IA +V +I+ D + V G +IN + Sbjct: 26 LLEVPKNSSMGDLAF-PVFSLAKVLRKAPQAIASELVEKIQSDK-FEKVQAVGP-YINFF 82 Query: 93 LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+ + + +L+ ++ +YG+ +G+ + I+ S N P VGH R V+GD+LA Sbjct: 83 LNKQEISQAVLAEVIAKDKDYGQQELGQCKNITIDMSSPNIAKPFSVGHLRSTVIGDSLA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + GY+ + ++ D G Q L ++ W + A+ P +Y++ + Sbjct: 143 KIFEKIGYKSVKINHLGDWGKQFGMLIVAYKKWGDEGAVRAT----PINELLKLYVR-IN 197 Query: 211 KELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQHDIFISEDDFHR 267 KE S L+ W ++ D ++ + RD+ L N +D+ + D + Sbjct: 198 KEAE---SQPELDEEARDWFRKLEAGDQEAISLWQWFRDESLVEFNRLYDLLRVQFDSYN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + +++ L + + E S+ Q +D+ ++ P Sbjct: 255 GEAFYNDKMDEVVTLLEDKDLLQE-------SQGAQVVKLDKY-----------GIENPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 L KSDG+ Y DLA Y K Y+ F IYV+G++ + + K+L+AV + + Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FAKSIYVVGNEQAAHFKQLKAVLKEMDYDWS 354 Query: 380 QINVLLCELVRLYRDGMPIKMS---------------KRAGDFITLRH--------VVDE 416 ++ + +DG + KRAGD I ++ V Sbjct: 355 D-DITHVPFGLVTKDGKKLSTRKGNVILLEPTIAEAIKRAGDQIEAKNPDLPNKEAVAQA 413 Query: 417 VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 VG +++F L DFD V + + P YVQYAYAR +SI R+A Sbjct: 414 VGVGAIKFYDLKTDRLNGYDFDLDAMVSFEGETGP--YVQYAYARIQSILRKA------- 464 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 DF P + D ++I + +P I+ A EP +A + LA F+ + Sbjct: 465 DFKADPAVGYYLD---DAESWEIIKLIQNFPAAIKRAADNFEPSIIAKFAISLAQAFNKY 521 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++H R Q+ R RL L + A ++ L ++GV++P+EM Sbjct: 522 YAHNR-----ILDQSPERD---SRLALSYTTALVLKEALRLLGVDAPDEM 563 >gi|116629130|ref|YP_814302.1| arginyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323] gi|116094712|gb|ABJ59864.1| arginyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323] Length = 564 Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 152/604 (25%), Positives = 254/604 (42%), Gaps = 119/604 (19%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 ++IERP++ G + A L++ +P IA+ I +I D + S+ G ++N Sbjct: 30 MLIERPKNAKMGDYAF-PAFALAKIEHKNPALIAKEIAEKIS-DDNFTSIEAVGP-YVNF 86 Query: 92 YLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + + L L+ ++ +G +GKG V I+ S N PM +GH R V+G+++ Sbjct: 87 AIDHAKLVNATLNDVLTEKDHFGDQQLGKGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSI 145 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV---YLK 207 A + GY + Y+ D G Q L + +R L+ N+ D+ + + Y+K Sbjct: 146 AKTLEKVGYTPIKINYLGDYGTQFGKLITA--YR----LWGNEEDVKKDPITNLFHYYVK 199 Query: 208 -HVGKELADKYSSE-------LLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNI 254 H E K E L N EE KW ++ S+Q +I K L + Sbjct: 200 FHEEAEKDPKLDDEGRAAFKKLENGDEEEIKLWKWF---REVSLQEFNRI----YKELGV 252 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 D + E F+ ++ ++D L +G + E S+ Q ++ Sbjct: 253 TFDSYNGEAFFN----DKMQPVVDELREKGLLEE-------SRGAQVVNL---------- 291 Query: 315 MVGDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 G+D + L LKSDGS Y DLA Y K +Y+ F +YV G + SG+ K+L+ V Sbjct: 292 --GEDENPALILKSDGSSLYMTRDLAAALYRKKEYD--FVMSLYVAGGEQSGHFKQLKQV 347 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL-------------------- 410 + A N+ + + G K+S R G+ + L Sbjct: 348 LKKMGYDWAD-NIHHIPFGLITQGGK--KLSTRKGNVVFLDKVLKDAVSLAEQQIEEKNP 404 Query: 411 -----RHVVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSI 464 V +VG +V F L + DFD + V+ + P YVQY AR +SI Sbjct: 405 NLANKDQVAHDVGVGAVVFHDLKNDRMDNFDFDLEEVVRFEGDTGP--YVQYTNARAQSI 462 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R+A ++ D N D + +A++P ++ A+ EP +A Y Sbjct: 463 LRKAN---KEISMDNLSLN--------DDWSFAVAKAIADFPAIVAKASEKFEPSIIAKY 511 Query: 525 LYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 DL+ F+ ++++ R E+ +L RL LV A + ++ L ++GV + Sbjct: 512 ALDLSKKFNKYYANVRILDEDDQLN-----------ARLALVQATSIVLTEALRLLGVNA 560 Query: 582 PNEM 585 P EM Sbjct: 561 PKEM 564 >gi|226311784|ref|YP_002771678.1| arginyl-tRNA synthetase [Brevibacillus brevis NBRC 100599] gi|226094732|dbj|BAH43174.1| arginyl-tRNA synthetase [Brevibacillus brevis NBRC 100599] Length = 571 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 144/603 (23%), Positives = 249/603 (41%), Gaps = 112/603 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P + A G ++ L++ L P IA + ++ P +S + ++NL+ Sbjct: 31 MLETPPNPAMGDVAF-PCFQLAKALRKAPPMIAAELAGQLSGAPLRESHAVGP--YVNLF 87 Query: 93 L-SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + +++ +I+ G YG + +G+G KV I+ S N P +GH R V+G+ +A Sbjct: 88 LDQENVAEQVIGTILTQGSTYGSSHVGEGRKVPIDLSSPNIAKPFSMGHLRSTVIGNAIA 147 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLA--------------------LSVFWRYQQALYN 191 ++M GY+ R ++ D G Q L LS++ R+ + + N Sbjct: 148 NIMEKQGYDPVRINHLGDWGTQFGKLIVAYRLWGDEAKVKAEPIKELLSLYVRFHEEVEN 207 Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251 + + +G + K + E D+ + L KW +D S++ MKI A Sbjct: 208 DPTLEDQGRE---WFKKL--EDGDEEAQHLW-----KWF---RDESLKEFMKIYDLMNVA 254 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 + H D R ++ L +G + E S ++D + Sbjct: 255 FDSTHGEAFYNDKMDR--------VVTLLEEKGLLTE-------SDGAMVVNLDEYNM-- 297 Query: 312 RSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLE 368 P L KSDG+ Y DLA ++E F +YV+G++ + ++L Sbjct: 298 ----------PPCLIKKSDGATLYATRDLAAALFRHESYDFAKALYVVGNEQRLHFQQLY 347 Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416 V + + N+ + +DG KMS R G + L V+ + Sbjct: 348 KVLEKMGYAWSA-NMHHIPFGMMLKDGK--KMSTRKGKVVLLEEVLAQAISDVQKVIEEK 404 Query: 417 -------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF-YVQYAYARCR 462 VG +V F L KN L D +F + + E YVQYA+AR Sbjct: 405 NPTLSTKEEVARQVGVGAVIFHDL--KNFRLNDVNFSWEEMLTFEGETGPYVQYAHARAC 462 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 S+ R+ P +L + +E+ +I L +P VIE A +P ++ Sbjct: 463 SLLRRG-GYQPATTVNLASGALDSKEA------WAVITLLNAFPEVIERAADNFDPSQIG 515 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 Y+ DLA F+ +++ R + A +T RLQLV AV +++ GL ++G+ +P Sbjct: 516 KYVIDLAQTFNKFYANVR-------ILAEEEDVTASRLQLVAAVVAVLKEGLRLLGLAAP 568 Query: 583 NEM 585 EM Sbjct: 569 EEM 571 >gi|312958530|ref|ZP_07773050.1| arginyl-tRNA synthetase [Pseudomonas fluorescens WH6] gi|311287073|gb|EFQ65634.1| arginyl-tRNA synthetase [Pseudomonas fluorescens WH6] Length = 578 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 131/573 (22%), Positives = 242/573 (42%), Gaps = 88/573 (15%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+LS+P G+ P +AE I+A + D V IAG GFIN Sbjct: 30 IQVENTRDKTHGDFASNIAMMLSKPAGMKPRDLAEKIIAALPADESVTKAEIAGPGFINF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + L L + + + G G+ +V ++ + N MHVGH R ++GD +A Sbjct: 90 FQNTQALASRLDAALADA-KIGARKAGEVQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND-SDLPEGYYPGVYLKHVG 210 ++ F G V R+ ++ D G Q L S+ + + +N+ SDL Y Sbjct: 149 RVLEFLGDSVIRQNHVGDWGTQFGMLMASL---QENPITSNELSDLENFYRAAKKRFDES 205 Query: 211 KELADKYSSEL--LNFPEEKWLPI---VKDYSV---QAMMKIIRDDLKALNIQHDIFISE 262 ++ AD+ + L + + L + +D S+ Q + +++ L ++ + ++ Sbjct: 206 EDFADRARGLVVKLQAGDAECLALWNRFRDISLSHCQEIYELLNVKLTMADVMGESAYND 265 Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322 D + +++++L +G + E S Q ++ F+ T G+ + Sbjct: 266 D---------LINVVNDLKAKGLLVE-------SNGAQCVFLEE----FK-TADGEPLPV 304 Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 ++K+DG Y Y DLA +Y G D +Y + + + +++ VA Sbjct: 305 IIVKADGGYLYATTDLA--AVRYRSGVLKADRALYFVDQRQALHFQQVFEVARRAGFVTH 362 Query: 380 QINVLLCELVRL---------YRDGMPIKM-------SKRAGDFIT----------LRHV 413 +++ + RDG +K+ RA + + LR++ Sbjct: 363 PMHMEHMGFGTMNGADGRPFKTRDGGTVKLIDLLNEAQDRAYNLVKEKNPELAEADLRNI 422 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ F Sbjct: 423 ARVVGIGAVKYADLSKHRTSDYSFNF-ELMLNFEGNTAPYLLYAYTRVAGVFRKLGKDFS 481 Query: 474 DLDFDLFPRNVI--PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 +++ R V+ P E E L LA+ V+ + P+ L YLY++A + Sbjct: 482 EVE----GRIVLDAPHEQE-------LAAKLAQLGEVLNSVGEKGTPHILCTYLYEVAGL 530 Query: 532 FHGHWSH---------GRENPRLRFVQANNRKL 555 F + + ++ RLR R L Sbjct: 531 FSSFYENCPILTADDEAQKQSRLRLAALAGRTL 563 >gi|300788535|ref|YP_003768826.1| arginyl-tRNA synthetase [Amycolatopsis mediterranei U32] gi|299798049|gb|ADJ48424.1| arginyl-tRNA synthetase [Amycolatopsis mediterranei U32] Length = 574 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 142/593 (23%), Positives = 240/593 (40%), Gaps = 90/593 (15%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V PRD N AM L + LG P +A LI +++D D ++G GF+N Sbjct: 33 LVQASPRDGVD--YQANLAMSLGKQLGRPPREVAGLIAGALELDGIADPPEVSGPGFLNF 90 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L +L + + ++ G + ++ +++ S N MHVGH R +V+GD LA Sbjct: 91 SLRTEWL-EARTGALLGDPRLGVPETTEPRRIALDYSSPNVAKEMHVGHLRSSVIGDALA 149 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 L+ F+G+EV ++ D G L + D+P G L + Sbjct: 150 RLLRFAGHEVLPHNHLGDWGTPFGMLIEHLL------------DVPAGQRAIADLDAFYR 197 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH--------DIFISED 263 E K+ S+ F +VK S + +L + +H I +++ Sbjct: 198 EARRKFDSD-EAFATRARTRVVKLQSGDEDTLAVWQELVDESTRHFNEVYALLGISLTDK 256 Query: 264 DFHRGDP--SP-IRDIIDNLARQGY--VYEG-ILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 D + G+ +P + +ID+L G V G I P+ + ++ DR L+ R Sbjct: 257 DIY-GESYYNPYLATVIDDLEAAGLTEVSNGAICVFPEGFSNREG--DRLPLIVR----- 308 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFK-CKYERGFDNMIYVMGS------------------ 358 K DG Y Y A DLA + ERG +++YV+G+ Sbjct: 309 --------KRDGGYGYAATDLATVRYWTAERGATDLLYVVGTPQAQHFAMVFATCRAAGW 360 Query: 359 -----DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 +H G+ L A A+ + + L L + + D V Sbjct: 361 LTGHAEHVGFGTVLGADGKAMRTRAGETVKLADLLTEAVTQAAAVVTERSELDAAGQAEV 420 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARCRSIFRQAKDIF 472 VG +V++ L D+ F + + E N Y+QYA+AR +S+ R+A + Sbjct: 421 ARAVGIGAVKYADL--SGDRERDYVFAWDRMLAYEGNTSVYLQYAHARTQSLLRKAGGL- 477 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 P Q + +E L + L + ++ AT P+KL YLY+ A F Sbjct: 478 --------PEGT--QVALEAPAERALALKLLRFGEALKAATSGYAPHKLCTYLYETAVAF 527 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + E P L+ A++ L RL+L + + GL+++G+E+P+ + Sbjct: 528 SRFFE---ECPVLK---ASSPSLRASRLRLTTLTSHTLALGLSLLGIEAPDRL 574 >gi|238852513|ref|ZP_04642925.1| arginine--tRNA ligase [Lactobacillus gasseri 202-4] gi|238834860|gb|EEQ27085.1| arginine--tRNA ligase [Lactobacillus gasseri 202-4] Length = 558 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 152/604 (25%), Positives = 254/604 (42%), Gaps = 119/604 (19%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 ++IERP++ G + A L++ +P IA+ I +I D + S+ G ++N Sbjct: 24 MLIERPKNAKMGDYAF-PAFALAKIEHKNPALIAKDIAEKIN-DDNFTSIEAVGP-YVNF 80 Query: 92 YLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + + L L+ ++ +G +GKG V I+ S N PM +GH R V+G+++ Sbjct: 81 AIDHAKLVNATLNDVLTEKDHFGDQQLGKGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSI 139 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV---YLK 207 A + GY + Y+ D G Q L + +R L+ N+ D+ + + Y+K Sbjct: 140 AKTLEKVGYTPIKINYLGDYGTQFGKLITA--YR----LWGNEEDVKKDPITNLFHYYVK 193 Query: 208 -HVGKELADKYSSE-------LLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNI 254 H E K E L N EE KW ++ S+Q +I K L + Sbjct: 194 FHEEAEKDPKLDDEGRAAFKKLENGDEEEIKLWKWF---REVSLQEFNRI----YKELGV 246 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 D + E F+ ++ ++D L +G + E S+ Q ++ Sbjct: 247 TFDSYNGEAFFN----DKMQPVVDELREKGLLEE-------SRGAQVVNL---------- 285 Query: 315 MVGDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 G+D + L LKSDGS Y DLA Y K +Y+ F +YV G + SG+ K+L+ V Sbjct: 286 --GEDENPALILKSDGSSLYMTRDLAAALYRKKEYD--FVMSLYVAGGEQSGHFKQLKQV 341 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL-------------------- 410 + A N+ + + G K+S R G+ + L Sbjct: 342 LKKMGYDWAD-NIHHIPFGLITQGGK--KLSTRKGNVVFLDKVLKDAVSLAEQQIEEKNP 398 Query: 411 -----RHVVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSI 464 V +VG +V F L + DFD + V+ + P YVQY AR +SI Sbjct: 399 NLANKDQVAHDVGVGAVVFHDLKNDRMDNFDFDLEEVVRFEGDTGP--YVQYTNARAQSI 456 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R+A ++ D N D + +A++P ++ A+ EP +A Y Sbjct: 457 LRKAN---KEISMDNLSLN--------DDWSFAVAKAIADFPAIVAKASEKFEPSIIAKY 505 Query: 525 LYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 DL+ F+ ++++ R E+ +L RL LV A + ++ L ++GV + Sbjct: 506 ALDLSKKFNKYYANVRILDEDDQLN-----------ARLALVQATSIVLTEALRLLGVNA 554 Query: 582 PNEM 585 P EM Sbjct: 555 PKEM 558 >gi|308051227|ref|YP_003914793.1| arginyl-tRNA synthetase [Ferrimonas balearica DSM 9799] gi|307633417|gb|ADN77719.1| arginyl-tRNA synthetase [Ferrimonas balearica DSM 9799] Length = 582 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 137/606 (22%), Positives = 242/606 (39%), Gaps = 103/606 (16%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 R+ ++R +D +HG L+TN AM+L++P G +P +A LI+ + V IAG GFIN Sbjct: 29 RLQVDRTKDKSHGDLATNLAMMLAKPAGKNPRELAGLIIDNLPESTLVAKTEIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +L +L K + +I S I + ++ + N M V H R V+GD + Sbjct: 89 FFLDAGWLGKQIETI-ASDDRANVAPIAAPQTIVTDYSAPNVAKEMAVHHIRSTVIGDAV 147 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNN 192 + F G+ V R +I D G Q L L F+R + Y+ Sbjct: 148 TRTLEFLGHNVVRANHIGDWGTQFGMLIAYLEKMENESAADMDLSDLEAFYREAKKCYDE 207 Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252 D + E V G E + +L++ A + I D L + Sbjct: 208 DGEFAERARNYVVKLQGGDEYCNAMWRKLVDI-------------TMAQNQAIYDRL-GV 253 Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312 ++ +D + E ++ P +I+ +L +QG E D K ++F Sbjct: 254 SLSNDDIMGESLYNPMLP----EIVADLTKQGLAVE--------------DQGAK-VVFL 294 Query: 313 STMVGDD---VDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLE 368 G D + + K DG + Y D+A K + + D ++Y + S + ++++ Sbjct: 295 DEFKGKDGNPMGVIIQKRDGGFLYTTTDIAAAKYRVDTFAADRILYFIDSRQAQHLQQAW 354 Query: 369 AVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 +A C + L +DG P K R+G + L +++E + + ++ Sbjct: 355 LIARKAGYLPDTTTTEHCAFGMMLGKDGKPFKT--RSGGTVKLADLLEEAHQRATK--LI 410 Query: 428 WRKNSEL----LDFDFCKVKEQS------------------------KENPVFYVQYAYA 459 KN +L LD V S + N Y+ YA++ Sbjct: 411 GEKNPDLQGDALDTIAATVAMASVKYSDLSKNRTTDYVFDWDNMLTFEGNTAPYMLYAFS 470 Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 R +SIFR+A +L+ + V+ + E L L ++ ++ P+ Sbjct: 471 RIQSIFRKAGVNAAELNGTV----VLAHD-----KEEALAQKLVQFNDAVQGVANKGMPH 521 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 + YLY+LA F + P + A + K + RL+L A A+ + GL ++G+ Sbjct: 522 LMCTYLYELAGAFMSFY---EACPINKDDVAEDAKAS--RLRLCAATANTLKVGLGLLGI 576 Query: 580 ESPNEM 585 + + M Sbjct: 577 NTLDRM 582 >gi|282851111|ref|ZP_06260485.1| arginine--tRNA ligase [Lactobacillus gasseri 224-1] gi|282558063|gb|EFB63651.1| arginine--tRNA ligase [Lactobacillus gasseri 224-1] Length = 535 Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 152/604 (25%), Positives = 254/604 (42%), Gaps = 119/604 (19%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 ++IERP++ G + A L++ +P IA+ I +I D + S+ G ++N Sbjct: 1 MLIERPKNAKMGDYAF-PAFALAKIEHKNPALIAKEIAEKIS-DDNFTSIEAVGP-YVNF 57 Query: 92 YLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + + L L+ ++ +G +GKG V I+ S N PM +GH R V+G+++ Sbjct: 58 AIDHAKLVNATLNDVLTEKDHFGDQQLGKGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSI 116 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV---YLK 207 A + GY + Y+ D G Q L + +R L+ N+ D+ + + Y+K Sbjct: 117 AKTLEKVGYTPIKINYLGDYGTQFGKLITA--YR----LWGNEEDVKKDPITNLFHYYVK 170 Query: 208 -HVGKELADKYSSE-------LLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNI 254 H E K E L N EE KW ++ S+Q +I K L + Sbjct: 171 FHEEAEKDPKLDDEGRAAFKKLENGDEEEIKLWKWF---REVSLQEFNRI----YKELGV 223 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 D + E F+ ++ ++D L +G + E S+ Q ++ Sbjct: 224 TFDSYNGEAFFN----DKMQPVVDELREKGLLEE-------SRGAQVVNL---------- 262 Query: 315 MVGDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 G+D + L LKSDGS Y DLA Y K +Y+ F +YV G + SG+ K+L+ V Sbjct: 263 --GEDENPALILKSDGSSLYMTRDLAAALYRKKEYD--FVMSLYVAGGEQSGHFKQLKQV 318 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL-------------------- 410 + A N+ + + G K+S R G+ + L Sbjct: 319 LKKMGYDWAD-NIHHIPFGLITQGGK--KLSTRKGNVVFLDKVLKDAVSLAEQQIEEKNP 375 Query: 411 -----RHVVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSI 464 V +VG +V F L + DFD + V+ + P YVQY AR +SI Sbjct: 376 NLANKDQVAHDVGVGAVVFHDLKNDRMDNFDFDLEEVVRFEGDTGP--YVQYTNARAQSI 433 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R+A ++ D N D + +A++P ++ A+ EP +A Y Sbjct: 434 LRKAN---KEISMDNLSLN--------DDWSFAVAKAIADFPAIVAKASEKFEPSIIAKY 482 Query: 525 LYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 DL+ F+ ++++ R E+ +L RL LV A + ++ L ++GV + Sbjct: 483 ALDLSKKFNKYYANVRILDEDDQLN-----------ARLALVQATSIVLTEALRLLGVNA 531 Query: 582 PNEM 585 P EM Sbjct: 532 PKEM 535 >gi|163802523|ref|ZP_02196415.1| arginyl-tRNA synthetase [Vibrio sp. AND4] gi|159173606|gb|EDP58425.1| arginyl-tRNA synthetase [Vibrio sp. AND4] Length = 577 Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 136/601 (22%), Positives = 236/601 (39%), Gaps = 118/601 (19%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG +P A+ ++ + +D IAG GFIN++LS ++L K Sbjct: 37 GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEAFLAKQA 96 Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 + + G+ K + ++ + N MHVGH R ++GD + + F G+ Sbjct: 97 EAALADSRLGV-----TADKAQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGH 151 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYY-PGVYLKHVGKELADK 216 +V R +I D G Q L ++ R QQ +L EG+Y L +E A K Sbjct: 152 KVIRANHIGDWGTQFGML-IANLERVQQESGEVSMELADLEGFYRESKKLYDEDEEFAVK 210 Query: 217 YSSELL------NFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNIQHDIFISED 263 + ++ F E W +V +Q + + RDD+ ++ +D+ Sbjct: 211 ARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESMYNDM----- 265 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDV 320 + I+ +L QG E D Q++F G+ + Sbjct: 266 ---------LPKIVADLKAQGLAVED---------------DGAQVVFLEEFKNKDGEAM 301 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAA 372 + K DG + Y D+A K +YE G D ++Y + S + V++ V Sbjct: 302 GVIVQKRDGGFLYTTTDIACAKYRYEEMGADRVLYFIDSRQHQHLMQAWTIVRKAGYVPE 361 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 VS + ++L +DG P K RAG + L ++DE + + ++ KN Sbjct: 362 TVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRAAQ--LIESKNP 411 Query: 433 EL-----------LDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRSI 464 EL + K + SK N Y+QYAY R S+ Sbjct: 412 ELAAEEKQAIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASV 471 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 F +A DL ++ D E LI L ++ +++ +P+ + Y Sbjct: 472 FAKAGVSMDDLRGEI---------KVTDEKEKALIAKLMQFEEAVQSVAREGQPHIMCSY 522 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 L++LA F + + A + + RL+L A I GL+++G+++ Sbjct: 523 LFELAGQFSSFYEA------CPILVAEDESVKQSRLKLAALTAKTIKQGLSLLGIDTLER 576 Query: 585 M 585 M Sbjct: 577 M 577 >gi|332662973|ref|YP_004445761.1| Arginyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100] gi|332331787|gb|AEE48888.1| Arginyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100] Length = 614 Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 140/599 (23%), Positives = 239/599 (39%), Gaps = 114/599 (19%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P IA+ + A + F KGF+NL + +Y + L I ++G G Sbjct: 56 PEAIAQELGAYLVEQVQSIKAFNVIKGFLNLVVDDAYWQAFLQDIY-HNPQFGTQ-APNG 113 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KV +E+ S N P+H+GH R ++G +++ + +GY+V R IND G I L+ Sbjct: 114 RKVMVEYCSPNTNKPLHLGHIRNILLGWSVSKIYEAAGYDVVRVQIINDRGIAICKSMLA 173 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY-----SSELLNFPEEKWLPIVKD 235 + +Y + S + ++ G Y K+ ++Y S E + EEK + Sbjct: 174 -WQKYGEGATPESSGIKSDHFVGDYYVLFEKKFQEEYKAWQQSPEAVALFEEK---KKAE 229 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDD----FHRGDPSPIRDIIDNLARQGYVYEGIL 291 S + K +D + N+ + + + DP+ I ++ + G+VY G Sbjct: 230 QSAEEYFKTFKD--QYFNLYSTLGKEARELLLAWEANDPATI-ELWKKM--NGWVYAGF- 283 Query: 292 PPPKSKTTQKCDMDRKQLLFRST--MVG-DDVDRPL------------------------ 324 T K + +L + S ++G + VD+ L Sbjct: 284 ----DSTFDKLGVRFDKLYYESNTYLLGRETVDQGLNSGVFYRLEDGSVWIDLEDAKLDK 339 Query: 325 ---LKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 L+ DG+ Y D+ + +Y + G + MIYV+ + + + + L + + E A Sbjct: 340 KLVLRKDGTSVYITQDIGTAQVRYRDFGAEKMIYVVADEQNYHFQVLFEIMKRLGEPYAG 399 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE---LLDF 437 L L D KM R G + ++DEV +++ W + E L D Sbjct: 400 ---GLYHLSYGMVDLPSGKMKSREGTVVDADDLIDEVVNEA------WENSKERGTLADL 450 Query: 438 D-----------------FCKVKEQSKENPVF--------------YVQYAYARCRSIFR 466 F VK K+ +F YVQ A RC S+ Sbjct: 451 SPEAQQEVIRKIGVAALKFFIVKVHPKKRMIFDPKESVDLQGQTGPYVQNAIVRCNSMLN 510 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 +A + PDL + +T+E +I L ++P +I+ A +P +A Y Y Sbjct: 511 KAGN--PDL-------SAASDYHTLETAEKDIIAQLYQFPEIIKQAAEGYDPSMVAMYSY 561 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +LA FH W R +QA R+QL AV +++ GL+++G+E+P M Sbjct: 562 ELAKAFHRFWHD------YRILQAETEAAKAFRIQLSMAVRNVLRMGLDLLGIETPERM 614 >gi|237745037|ref|ZP_04575518.1| arginyl-tRNA synthetase [Fusobacterium sp. 7_1] gi|229432266|gb|EEO42478.1| arginyl-tRNA synthetase [Fusobacterium sp. 7_1] Length = 569 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 137/581 (23%), Positives = 250/581 (43%), Gaps = 88/581 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AMI S+ +G +P IAE I V+ + +AG GFIN++LS Y I Sbjct: 39 GDYQCNFAMINSKIIGDNPRKIAEKIKNNFPYGNVVEKLEVAGPGFINIFLSDKY---IS 95 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 SI G +Y + + + KV ++F S N MH+GH R ++G+++ + + GY+V Sbjct: 96 DSIKKIGEDYDFSFLNRKGKVIVDFSSPNIAKRMHIGHLRSTIIGESVCRIYRYLGYDVV 155 Query: 163 REYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVGK-----ELADK 216 + +I D G Q L + W ++A N + E VY+K + L D Sbjct: 156 ADNHIGDWGTQFGKLIVGYRKWLNREAYEKNAIEELE----RVYVKFSDEAEKDPSLEDL 211 Query: 217 YSSEL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274 +EL + EE+ + K++ ++ +K K L++ D + E ++ + Sbjct: 212 ARAELKKVQDGEEENTKLWKEFITES-LKEYNKLYKRLDVHFDTYYGESFYN----DMMA 266 Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334 D++ L +G + + + D K LF + K DG+Y Y Sbjct: 267 DVVKELIDKGLAVD-------DEGAKVVFFDEKDNLFPCI---------VQKKDGAYLYS 310 Query: 335 AADLAYFKC-KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393 +D+A K K + MIY+ + + K+ + + + ++ ++R + Sbjct: 311 TSDIATVKFRKNTYDVNKMIYLTDARQQDHFKQFFKITDILGWNIEKYHIWFG-IIR-FA 368 Query: 394 DGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMM 426 DG+ +S R G+ I L ++DE VG SV++ Sbjct: 369 DGI---LSTRKGNVIKLEELLDEAHNRAYDVVNEKNPNLSEEEKQNIAEVVGVSSVKYAD 425 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 L + + F++ K+ + N Y+ Y YAR +SI R+ + DL+ D+ I Sbjct: 426 LSQNKQSDIIFEWDKML-SFEGNTAPYLLYTYARIQSILRKVAEQNIDLNEDI----EIK 480 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 +++F+ S L +L +P + A +P +A YLY+L+ + +++ P L Sbjct: 481 TDNKFEKS---LATYLLAFPISVLKAAETFKPNLIADYLYELSKKLNSFYNNC---PIL- 533 Query: 547 FVQANNRKLTMM--RLQLVHAVASIINSGLNIIGVESPNEM 585 N+ + + R L+ ++ GL ++G+ N+M Sbjct: 534 -----NQDIETLKSRALLIKKTGKVLKDGLRLLGIPVLNKM 569 >gi|186684132|ref|YP_001867328.1| arginyl-tRNA synthetase [Nostoc punctiforme PCC 73102] gi|238689424|sp|B2J6I0|SYR_NOSP7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|186466584|gb|ACC82385.1| arginyl-tRNA synthetase [Nostoc punctiforme PCC 73102] Length = 584 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 140/581 (24%), Positives = 237/581 (40%), Gaps = 74/581 (12%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N A+ LS+ LG P IA IV ++ + + IAG GFINL L +YL L Sbjct: 40 GDYQANVALSLSKKLGKQPRAIAGAIVEKLDVSEICEPPEIAGPGFINLKLKTAYLEAQL 99 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + I G + N++F S N MHVGH R ++GD++A ++ F G++V Sbjct: 100 NDIQADP-RLGVPAAKTPKRENVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFQGHDVL 158 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222 R ++ D G Q L + Y AL ++ L G Y K + D E Sbjct: 159 RLNHVGDWGTQFGMLIAYLREVYPDALTTANA-LDIGDLVSFYRKAKQRFDTDTAFQETA 217 Query: 223 NFPEEKWLPIVKD--YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP--SP-IRDII 277 + +D ++ + + + R + + + DI ++E RG+ +P + I+ Sbjct: 218 RQEVVRLQAGAEDTLHAWKLLCEQSRREFQVIYELLDIKLTE----RGESFYNPLLSGIV 273 Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337 ++L + G + E KC L + G+ + + KSDG Y Y D Sbjct: 274 EDLEKSGLLVE--------NQGAKCVF----LEGFTNREGEPLPLIVQKSDGGYNYATTD 321 Query: 338 LAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDG 395 LA + + ++ +IYV + + + VA + ++ + L DG Sbjct: 322 LASLRYRIQQDQAKRIIYVTDAGQGNHFAQFFQVARKAGWIPDDVELVHVPFGLVLGEDG 381 Query: 396 MPIKMSKRAGDFITLRHVVDE-------------------------------VGSDSVRF 424 K R+GD + LR ++DE VG +V++ Sbjct: 382 K--KFKTRSGDTVRLRDLLDEAVSHAHADLKTRLQKEERQETEEFINEVARVVGISAVKY 439 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 L + + F + K+ + K N Y+ Y YAR I R+ D++F N Sbjct: 440 ADLSQNRTSNYIFSYDKMLD-LKGNTAPYMLYVYARIHGISRKG-----DINFKELGNNA 493 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 + + E +EL L +L + VI + P +L YL++L+ F+ + R Sbjct: 494 VLLQHE---TELALAKYLLQLDEVISSVEQDLLPNRLCEYLFELSQKFNQFYD------R 544 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +QA + T RL L A + GL+++G++ M Sbjct: 545 CSILQAEEPQRT-SRLVLCDLTARTLKLGLSLLGIQVLERM 584 >gi|15921521|ref|NP_377190.1| arginyl-tRNA synthetase [Sulfolobus tokodaii str. 7] gi|23822200|sp|Q971X1|SYR_SULTO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|15622307|dbj|BAB66299.1| 623aa long hypothetical arginyl-tRNA synthetase [Sulfolobus tokodaii str. 7] Length = 623 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 136/557 (24%), Positives = 229/557 (41%), Gaps = 112/557 (20%) Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170 +YG I K +V +E SANP P+HVGH R A++GD +A ++ G+EV +Y+NDA Sbjct: 97 DYGIEKIQKPQRVVVEHTSANPIHPLHVGHLRNAILGDVIARMLKARGHEVNTRFYVNDA 156 Query: 171 GAQINTLAL---------------------------SVFWRYQQALYNNDSDLPEGYYPG 203 G Q+ L L ++ Q S E Y Sbjct: 157 GRQVAILTLGYLLLGEPNPPRDEKIDQWIGVIYAITNILIEINQLKKELSSSNEEEYRQK 216 Query: 204 VYL---------KHVGK--ELADKYSSELLNFP--EEKWLPIVKDYSVQAMMKII----- 245 + KH K E+ DK + E+ EEK I+K+Y + KI+ Sbjct: 217 ISKLDELISLAGKHREKYPEIFDKLADEISKIENIEEKIQNIIKNYERHSDEKIVNVIRK 276 Query: 246 ---------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 +D LK L+I D F E D +D + + + I K Sbjct: 277 LVNWTLEGFKDSLKILDIHFDNFDYESDLLWSKR------VDEIVKLALSSKNI-KEHKG 329 Query: 297 KTTQKCDMD---RKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYERGFD 350 D+D RK+L + +G ++ P L++SDG+ Y D+AY K+E + Sbjct: 330 TIALSLDLDPEARKRL---NIPLG--LELPPLVLVRSDGTTLYTTRDIAYSLYKFEVFYA 384 Query: 351 N-MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 N +I V+ S +L A + K N++ + GM +MS R G +I+ Sbjct: 385 NKVINVIAEQQSVPQMQLRASLYLLGFKDIAENLIHYSYGMVNLQGM--RMSGRLGRYIS 442 Query: 410 LRHVVDEV-----------GSD----------SVRFMMLWRKNSELLDFDFCKVKEQSKE 448 L +++EV G D ++R+ +L ++ + F+ + + + Sbjct: 443 LDEIINEVKEVAENKIKEKGGDLNNLLDIVNSAIRYAILSVSANKPVSFNIKNIVD-FDQ 501 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 N Y+QY YAR +I + ++ D S+ + +L++ +A++P V Sbjct: 502 NSGPYLQYTYARAYNILAKNEEKLDINKVDF---------SDIVDDKRRLLISIAKFPEV 552 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 A P L ++ +A +F+ W + R +Q N M+RL +V V Sbjct: 553 ATKAVDELRPEDLLGFMRSIADIFN-RWYNFE-----RVLQEPNEGKRMLRLFIVKGVER 606 Query: 569 IINSGLNIIGVESPNEM 585 I+ +GL+I+G++ M Sbjct: 607 ILYNGLSIVGIKPLKRM 623 >gi|238783286|ref|ZP_04627311.1| Arginyl-tRNA synthetase [Yersinia bercovieri ATCC 43970] gi|238715879|gb|EEQ07866.1| Arginyl-tRNA synthetase [Yersinia bercovieri ATCC 43970] Length = 576 Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 136/594 (22%), Positives = 238/594 (40%), Gaps = 105/594 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ +G+ P +AE ++ + ++ V IAG GFIN++L + Sbjct: 37 GDYQANGVMAVAKKMGMQPRQLAEKVIELLDLEGIASKVEIAGPGFINIFLDRQW----- 91 Query: 103 SSIVVSGIEYGRNLIGKGT------KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 V S +E+ G + +++ + N MHVGH R ++GD + F Sbjct: 92 ---VASKVEFALTAPKLGVAPVEPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEF 148 Query: 157 SGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPE 198 G+ V R ++ D G Q L L +F YQQA D D Sbjct: 149 LGHHVIRANHVGDWGTQFGMLIAYLEKMQNESASDMDLSDLELF--YQQAKKTYDEDEEF 206 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y+ V + D+Y ++ W +V D ++ A +I D L + + D Sbjct: 207 ALRARAYV--VKLQSGDEYCRQM-------WRKLV-DITM-AQNQIAYDRLN-VTLTTDD 254 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + E ++ P I+ +L +G E T D + + G+ Sbjct: 255 VMGESLYNAMLPG----IVADLKAKGLAVE-----SDGATVVYLDEYKNK-------DGE 298 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370 + + K DG Y Y D+A K +YE G D ++Y + + + V++ V Sbjct: 299 PMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYYIDTRQHQHLMQAWTIVRKAGYV 358 Query: 371 AAAVSEKKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LR 411 +V + ++L + + + R G +K+S +RAG I L+ Sbjct: 359 PESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLDEAIERAGKLIAEKNPDMPADELK 418 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VV+ VG +V++ L + + FD+ + N Y+QYAY R S+F++A Sbjct: 419 QVVEAVGIGAVKYADLSKSRTTDYIFDWDNMLALDG-NTAPYMQYAYTRVVSVFKRAGVD 477 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 L L VI ++ E L L ++ VI P+ + YLYD+A + Sbjct: 478 ENSLTLPL----VITEDRE-----AALATRLLQFEEVITTVAREGTPHVMCSYLYDVAGL 528 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + H + + A + ++ RL+L A + GL+ +G+ + M Sbjct: 529 FSSFYEH------CQILNAASEEIRQSRLKLAMLTAKTLKQGLDTLGIRTVERM 576 >gi|313890374|ref|ZP_07824005.1| arginine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026] gi|313121217|gb|EFR44325.1| arginine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026] Length = 562 Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 143/588 (24%), Positives = 247/588 (42%), Gaps = 86/588 (14%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G ++ L++ L P IA + KIDP +A +IN + Sbjct: 26 LLETPKNSDMGDIAF-PTFSLAKVLRKAPQMIAAELAE--KIDPSQFEKVMAVGPYINFF 82 Query: 93 LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + + K +L +++ YG+ IG G + ++ S N P VGH R V+ D + Sbjct: 83 LDKTTISKNVLHAVIEEKANYGQQHIGDGQNITLDMSSPNIAKPFSVGHLRSTVIADAIG 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + + GY R ++ D G Q L ++ W Q A+ N D LK Sbjct: 143 HIYSKLGYNSIRINHLGDWGKQFGMLIVAYKLWGDQAAIEANPID--------ELLKLYV 194 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 + A+ + L+ +W ++D +A + + RD+ L N +D D+ Sbjct: 195 RINAEAEENPELDEQARQWFKKLEDGDKEAWDLWQWFRDESLVEFNRIYDKLDVTFDYFH 254 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-- 325 G+ + D +D + + E +SK Q D+++ L P L Sbjct: 255 GE-AFYNDKMDEGIQ---ILEDKHLLKESKGAQIVDLEKYDL------------PPALIK 298 Query: 326 KSDGSYTYFAADLAYFKCKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383 KSDG+ Y D+A + +R F+ IYV+G + S + K+L+AV + A N+ Sbjct: 299 KSDGATLYITRDMATAMYR-QRTFNFVKNIYVVGQEQSHHFKQLKAVLKEMGFDWAD-NM 356 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------VG 418 + + ++ K+S R G+ I L +DE VG Sbjct: 357 IHVSFGLVTKNKK--KLSTRKGNIIRLEPTLDEAVARALTQIESKNPDLENKEAVAHAVG 414 Query: 419 SDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 +V+F L DFD V + + P YVQY YAR +SI R+A + PD++ Sbjct: 415 VGAVKFYDLKTDRDNGYDFDLEAMVSFEGETGP--YVQYTYARIQSILRKA-NFTPDVNK 471 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 D S D ++I L + I+ A +P +A + LA F+ +++ Sbjct: 472 DY---------SLKDDESWEIIKLLQSFASNIQRAADKYDPSIIAKFAIQLAQAFNKYYA 522 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H R +++ R RL L ++ A ++ L ++GV++P +M Sbjct: 523 HTR-----ILDESDERD---SRLALCYSTAVVLKESLRLLGVQAPEKM 562 >gi|73953492|ref|XP_866928.1| PREDICTED: similar to arginyl-tRNA synthetase isoform 3 [Canis familiaris] Length = 662 Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 137/581 (23%), Positives = 258/581 (44%), Gaps = 67/581 (11%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S+ L ++P IAE I + + V+ V IAG GFIN++L + Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECVERVEIAGPGFINVHLRKDF 170 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + L++++V+G++ +G+ KV ++F S N MHVGH R ++G+++ L F+ Sbjct: 171 VSQQLTNLLVNGVQLP--ALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFA 228 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215 GY+V R ++ D G Q L + ++ L + DL + +Y + +E Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFK 287 Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275 K + + + + K I+K + + + + R + + DI + E RG+ S +D Sbjct: 288 KRAYQCVVLLQSKNPDIIKAWKL--ICDVSRQEFNKIYDALDISLIE----RGE-SFYQD 340 Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335 ++++ ++ +E K + D D ++++F + G V ++KSDG YTY Sbjct: 341 RMNDVVKE---FED-----KEPRFVQVD-DGRKIVF---VPGCSVPLTIVKSDGGYTYDT 388 Query: 336 ADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAV-------------------S 375 +DLA K + +E D +IYV+ + S + + + A + Sbjct: 389 SDLAALKQRLFEEKADMIIYVVDNGQSVHFQTIFGAAQMIGWYDPKVTRVSHAGFGVVLG 448 Query: 376 EKKAQINVLLCELVR---LYRDGMPIKMSK---RAGDFI----TLRHVVDEVGSDSVRFM 425 E K + E VR L +G+ M K + D + L+ V +++ Sbjct: 449 EDKKKFKTRSGETVRLIDLLEEGLKRSMDKLKEKERDKVLTAEELKAAQTSVAYGCIKYA 508 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 L F F K+ + + N Y+ YA+ R RSI R A +++ ++ + Sbjct: 509 DLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NINEEMLQKAAQ 562 Query: 486 PQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 + D E +L + +P +++ + L Y+Y+LA+ F + + Sbjct: 563 ETKIVLDHEKEWKLGRCILRFPEILQKILDDLLLHTLCDYIYELATTFTEFYDSCYCVEK 622 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R K+ M R+ L AVA+I+ +I+G++ M Sbjct: 623 DRQT-GQVLKVNMWRMLLCEAVAAIMAKAFDILGIKPVQRM 662 >gi|146418269|ref|XP_001485100.1| hypothetical protein PGUG_02829 [Meyerozyma guilliermondii ATCC 6260] Length = 632 Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 135/549 (24%), Positives = 222/549 (40%), Gaps = 104/549 (18%) Query: 88 FINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 F+ + S S L ++ + EYG +GKG KV IEF S N P H GH R ++ Sbjct: 137 FLQFFFSTSVLFNVVIKDSLTRTTEYGALPLGKGKKVVIEFSSPNIAKPFHAGHLRSTII 196 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGV 204 G L+ L G+EV++ Y+ D G Q LA+ F RY ++ L N P + V Sbjct: 197 GGFLSKLYEKEGWEVSKLNYLGDWGKQFGLLAIG-FQRYGSEEELVKN----PINHLFEV 251 Query: 205 YLK-----------HVG--KELADKYSSELLNFPEEK---WLPIVKDYSVQAMMKIIRDD 248 Y++ VG + A Y + + EE W +DYS++ + D Sbjct: 252 YVRINQDVAAEGPDAVGGVNDQAKHYFKRMEDGDEEALVLWRRF-RDYSIEKYI----DT 306 Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308 LNI +D + E + +++++ +G ++E K + D+ + Sbjct: 307 YARLNIVYDKYAGESLVSK---QKMKEVVQIFNEKGLIHE-------DKGAKLIDLTKFN 356 Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD---HSG-- 362 T+V KSDG+ Y D+ +YE FD MIYV+ S H+ Sbjct: 357 KKLGKTLVE--------KSDGTSIYLTRDVGEAIARYETYKFDKMIYVIASQQDLHTAQF 408 Query: 363 ----------YVKRLEAV----AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 + RLE V +S +K + V L ++ ++ M M K + Sbjct: 409 FEILKQMGFEWANRLEHVNFGMVLGMSTRKGTV-VFLDNILEETKEKMHEVMKKNEDKYA 467 Query: 409 TL---RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSI 464 + V D VG +V + K +F + ++ + P Y+QYA++R S+ Sbjct: 468 QIEDPEKVADLVGISAVMIQDMQSKRINNYEFKWDRMTSFEGDTGP--YLQYAHSRLSSV 525 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSEL------QLIVHLAEYPRVIENATIAQ 516 R++ IP E +E D S L LI LA+YP ++ A Sbjct: 526 QRKSG---------------IPNEKLTEADLSLLTEPCAGNLIRILAQYPDILRRAMTTH 570 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 EP + YL++L V + + +V KL RL L + ++ +G+ + Sbjct: 571 EPSTIVTYLFNLTHVVSQCYD-------ILWVAGQEEKLATARLALYASAKQVLYNGMTL 623 Query: 577 IGVESPNEM 585 +G+ M Sbjct: 624 LGLTPVERM 632 >gi|227431637|ref|ZP_03913673.1| arginyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352629|gb|EEJ42819.1| arginyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 563 Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 141/600 (23%), Positives = 247/600 (41%), Gaps = 111/600 (18%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +E P+ G ++ L++ L P IA IVA ID + +A ++N +L Sbjct: 27 LEAPKSSDLGDVAF-PTFTLAKTLHKAPQLIAADIVA--AIDQEGFEKVVATGPYVNFFL 83 Query: 94 SP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 + ++L ++ YG N+ G+G KV I+ S N PM +GH R V+G+ LA+ Sbjct: 84 DKVATSNQVLKTVFDLEGAYGDNVDGQGAKVTIDMSSPNIAKPMSMGHLRSTVIGNALAN 143 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 + A +GY + ++ D G Q L + W ++ + ++ YY V K Sbjct: 144 ITAKNGYAPVKINHLGDWGTQFGKLIYAYKAWGSEEEVKSDPIATLLKYY--VEFHEKAK 201 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQA----------MMKIIRDDLKALNIQHDIFIS 261 E ++LLN W ++D +A +K + L+I D F Sbjct: 202 E------NDLLNDEGRAWFKKLEDGDEEAHRLWQWFRAESLKEFSEIYDRLDITFDSFNG 255 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E ++ + ++D L + + E S+ Q D+ M+ Sbjct: 256 EAFYN----DKMDKVVDLLEEKNLLVE-------SQGAQIVDLSHINPNLTPAMIK---- 300 Query: 322 RPLLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374 +SDG+ Y DLA Y K Y+ F +YV+G + + +++AV + + Sbjct: 301 ----RSDGATLYMTRDLAAALYRKETYD--FAKSLYVVGGEQREHFVQMKAVLSLMGFEW 354 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD------------------- 415 S+ I L +G KMS R G+ + L+ V+D Sbjct: 355 SDDTEHIAFGLITF-----NGK--KMSTRKGEVVLLKDVLDDAHELALKQIQEKNPALGD 407 Query: 416 ------EVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQA 468 EVG+ +V F L + DF+ + V+ + P YVQY AR +SI R+ Sbjct: 408 KYTVAEEVGAGAVVFHDLMNDRTNNFDFNLEEVVRFEGDTGP--YVQYTNARAKSILRKT 465 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 D +L D + +I L +P+ ++ A +E +A Y +L Sbjct: 466 SVQLTSDDLNL-----------TDPATWDIITTLNNFPKTVQRAWQQREASIIAKYALNL 514 Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + F+ ++++ + E+ +L RL LV +V+ ++ GL ++GV++P EM Sbjct: 515 SRAFNKYYANSKILTEDAQLN-----------ARLVLVKSVSIVLTEGLRLLGVKAPEEM 563 >gi|294659494|ref|XP_461877.2| DEHA2G07590p [Debaryomyces hansenii CBS767] gi|199434005|emb|CAG90340.2| DEHA2G07590p [Debaryomyces hansenii] Length = 628 Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 130/543 (23%), Positives = 230/543 (42%), Gaps = 92/543 (16%) Query: 88 FINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 F+ + S L ++ +V +YG IG KV +EF S N P H GH R ++ Sbjct: 133 FLQFFFSKELLFNLVIKDTLVRTDKYGSLPIGLNKKVIVEFSSPNIAKPFHAGHLRSTII 192 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGV 204 G L++L +G++VTR Y+ D G Q LA+ F +Y +++L + P + V Sbjct: 193 GGFLSNLYEKAGWDVTRINYLGDWGKQFGLLAVG-FEKYGSEESLAKD----PINHLFEV 247 Query: 205 YLKHVGKELADK--------------YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250 Y+K V K++ ++ Y + N EE L I K + ++ K I D Sbjct: 248 YVK-VNKDVTEEGEDATDGTNDKARAYFKRMENGDEEA-LKIWKRFRELSIHKYI-DTYA 304 Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310 LNI++D++ E + ++ +D ++G ++E DR L Sbjct: 305 RLNIKYDLYSGESQVSK---ESMKAAMDTFDKKGLLHE----------------DRGAKL 345 Query: 311 FRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYV---- 364 T + + L+ KSDG+ Y D+ +Y FD MIYV+ S +V Sbjct: 346 IDLTKFNKKLGKCLVEKSDGTSLYLTRDVGEAVKRYNTYKFDKMIYVIASQQDLHVAQFF 405 Query: 365 -----------KRLEAV----AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 K LE V +S +K + V L ++ ++ M M K + Sbjct: 406 EILKQMGFEWAKSLENVNFGMVQGMSTRKGTV-VFLDNILEETKEKMHEVMKKNEAKYAQ 464 Query: 410 LRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIF 465 + + + D VG +V + K +F + ++ + P Y+QYA++R RSI Sbjct: 465 IENPDLIADLVGISAVMIQDMQSKRINNYEFKWDRMTSFEGDTGP--YLQYAHSRLRSIQ 522 Query: 466 RQAKDIFPDL---DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 R++ +L ++DL + LI LA+YP I+ A EP + Sbjct: 523 RKSDISEEELLHANYDLLT----------EPCAANLIRTLAQYPDTIQKALKTHEPSTIV 572 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 YL++L + + + +V ++L + RL L + ++++G+ ++G+ Sbjct: 573 TYLFNLTHIASQCYD-------ILWVAGQEKELAVARLALYASARQVLHNGMTLLGLTPV 625 Query: 583 NEM 585 + M Sbjct: 626 DRM 628 >gi|190346605|gb|EDK38731.2| hypothetical protein PGUG_02829 [Meyerozyma guilliermondii ATCC 6260] Length = 632 Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 135/549 (24%), Positives = 222/549 (40%), Gaps = 104/549 (18%) Query: 88 FINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 F+ + S S L ++ + EYG +GKG KV IEF S N P H GH R ++ Sbjct: 137 FLQFFFSTSVLFNVVIKDSLTRTTEYGALPLGKGKKVVIEFSSPNIAKPFHAGHLRSTII 196 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGV 204 G L+ L G+EV++ Y+ D G Q LA+ F RY ++ L N P + V Sbjct: 197 GGFLSKLYEKEGWEVSKLNYLGDWGKQFGLLAIG-FQRYGSEEELVKN----PINHLFEV 251 Query: 205 YLK-----------HVG--KELADKYSSELLNFPEEK---WLPIVKDYSVQAMMKIIRDD 248 Y++ VG + A Y + + EE W +DYS++ + D Sbjct: 252 YVRINQDVAAEGPDAVGGVNDQAKHYFKRMEDGDEEALVLWRRF-RDYSIEKYI----DT 306 Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308 LNI +D + E + +++++ +G ++E K + D+ + Sbjct: 307 YARLNIVYDKYAGESLVSK---QKMKEVVQIFNEKGLIHE-------DKGAKLIDLTKFN 356 Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD---HSG-- 362 T+V KSDG+ Y D+ +YE FD MIYV+ S H+ Sbjct: 357 KKLGKTLVE--------KSDGTSIYLTRDVGEAIARYETYKFDKMIYVIASQQDLHTAQF 408 Query: 363 ----------YVKRLEAV----AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 + RLE V +S +K + V L ++ ++ M M K + Sbjct: 409 FEILKQMGFEWANRLEHVNFGMVLGMSTRKGTV-VFLDNILEETKEKMHEVMKKNEDKYA 467 Query: 409 TL---RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSI 464 + V D VG +V + K +F + ++ + P Y+QYA++R S+ Sbjct: 468 QIEDPEKVADLVGISAVMIQDMQSKRINNYEFKWDRMTSFEGDTGP--YLQYAHSRLSSV 525 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSEL------QLIVHLAEYPRVIENATIAQ 516 R++ IP E +E D S L LI LA+YP ++ A Sbjct: 526 QRKSG---------------IPNEKLTEADLSLLTEPCAGNLIRILAQYPDILRRAMTTH 570 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 EP + YL++L V + + +V KL RL L + ++ +G+ + Sbjct: 571 EPSTIVTYLFNLTHVVSQCYD-------ILWVAGQEEKLATARLALYASAKQVLYNGMTL 623 Query: 577 IGVESPNEM 585 +G+ M Sbjct: 624 LGLTPVERM 632 >gi|158337656|ref|YP_001518831.1| arginyl-tRNA synthetase [Acaryochloris marina MBIC11017] gi|158307897|gb|ABW29514.1| arginyl-tRNA synthetase [Acaryochloris marina MBIC11017] Length = 584 Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 144/594 (24%), Positives = 243/594 (40%), Gaps = 100/594 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G +N ++ L++PLG P IA+ I+ +++D + IAG GFINL L P++L + L Sbjct: 40 GDYQSNVSLALAKPLGQSPRGIADQILQHLEVDDLCEPPTIAGPGFINLTLKPTFLAEQL 99 Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 + GIE I +V ++F S N MHVGH R ++GD +A ++ F G Sbjct: 100 QQMQADPRLGIEP----IADPQRVIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFQGN 155 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDS----DLPEGYYPGVYLKHVGKELAD 215 +V R ++ D G Q L + + AL +D+ DL Y ++ Sbjct: 156 DVLRLNHVGDWGTQFGMLITYLSEVHPAALTTSDALDLGDLVAFYKKAKQRFDEDEDFQV 215 Query: 216 KYSSELLNFPE------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 + + ++ + + W ++ D S + KI RD DI ++E RG+ Sbjct: 216 QSRNAVVKLQQGDSEATQAW-QLLCDQSRREFEKIYRD--------LDIELTE----RGE 262 Query: 270 P--SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLL 325 +P + D++ +L + G + +T Q Q +F D +PL+ Sbjct: 263 SFYNPFLADVLTDLDKAGLL----------ETDQGA-----QCVFLEGFTNKQGDPQPLI 307 Query: 326 --KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG + Y DLA + + +IY+ + + + ++ VA I Sbjct: 308 VQKSDGGFNYATTDLAALRHRITAESAQRLIYITDAGQANHFAQVFQVARRAQWMPETIQ 367 Query: 383 VLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEV---GSDSVRFMMLWRKNSELLDF- 437 V+ + DG K+ R+G I LR ++DE + + +E DF Sbjct: 368 VVHMPFGLVQGEDGK--KLKTRSGKTIRLRDLLDEAVTRAQTDIETRLAEEDRTESPDFI 425 Query: 438 ------------DFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKDI 471 + + + N VF Y+ YAY R + I R+ K Sbjct: 426 ANAAQVIGLGAVKYADLSQNRTSNYVFSYDKMLALQGNTAPYMLYAYVRVQGISRKGKID 485 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 F LD D+ ++I E SEL L HL + ++ P +L YL++L+ Sbjct: 486 FSQLD-DV---SLIIAEP----SELALAKHLLQMQDILSEVAADLLPNRLCQYLFELSQK 537 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ + + P L + RL L A + GL+++G+E M Sbjct: 538 FNQFYD---QCPVLNAEEPARTS----RLVLSDLTARTLKLGLSLLGIEVLERM 584 >gi|300362212|ref|ZP_07058389.1| arginine--tRNA ligase [Lactobacillus gasseri JV-V03] gi|300354831|gb|EFJ70702.1| arginine--tRNA ligase [Lactobacillus gasseri JV-V03] Length = 564 Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 152/604 (25%), Positives = 254/604 (42%), Gaps = 119/604 (19%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 ++IERP++ G + A L++ +P IA+ I +I D + S+ G ++N Sbjct: 30 MLIERPKNAKMGDYAF-PAFALAKIEHKNPALIAKDIAEKIS-DDNFTSIQAVGP-YVNF 86 Query: 92 YLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + + L L+ ++ +G +G+G V I+ S N PM +GH R V+G+++ Sbjct: 87 AIDHAKLVNATLNDVLTEKDHFGDQQLGEGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSI 145 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV---YLK 207 A + GY + Y+ D G Q L + +R L+ N+ D+ + + Y+K Sbjct: 146 AKTLEKVGYTPIKINYLGDYGTQFGKLITA--YR----LWGNEEDVKKDPITNLFHYYVK 199 Query: 208 -HVGKELADKYSSE-------LLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNI 254 H E K E L N EE KW ++ S+Q +I K L + Sbjct: 200 FHEEAEKDPKLDDEGRAAFKKLENGDEEEIKLWKWF---REVSLQEFNRI----YKELGV 252 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 D + E F+ ++ ++D L +G + E S+ Q ++ Sbjct: 253 TFDSYNGEAFFN----DKMQPVVDELREKGLLEE-------SRGAQVVNL---------- 291 Query: 315 MVGDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 G+D + L LKSDGS Y DLA Y K +Y+ F +YV G + SG+ K+L+ V Sbjct: 292 --GEDENPALILKSDGSSLYMTRDLAAALYRKKEYD--FVMSLYVAGGEQSGHFKQLKQV 347 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL-------------------- 410 + A N+ + + G K+S R G+ + L Sbjct: 348 LKKMGYDWAD-NIHHIPFGLITQGGK--KLSTRKGNVVFLDKVLKDAVSLAEQQIEEKNP 404 Query: 411 -----RHVVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSI 464 V +VG +V F L + DFD + V+ + P YVQY AR +SI Sbjct: 405 NLANKDQVAHDVGVGAVVFHDLKNDRMDNFDFDLEEVVRFEGDTGP--YVQYTNARAQSI 462 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R+A ++ D N D + LA++P ++ A+ EP +A Y Sbjct: 463 LRKAN---KEISMDNLSLN--------DDWSFAVAKALADFPAIVAKASEKFEPSIIAKY 511 Query: 525 LYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 DL+ F+ ++++ R E+ +L RL LV A + ++ L ++GV + Sbjct: 512 ALDLSKKFNKYYANVRILDEDDQLN-----------ARLALVQATSIVLTEALRLLGVNA 560 Query: 582 PNEM 585 P EM Sbjct: 561 PKEM 564 >gi|156841670|ref|XP_001644207.1| hypothetical protein Kpol_1059p40 [Vanderwaltozyma polyspora DSM 70294] gi|156114844|gb|EDO16349.1| hypothetical protein Kpol_1059p40 [Vanderwaltozyma polyspora DSM 70294] Length = 649 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 132/537 (24%), Positives = 226/537 (42%), Gaps = 91/537 (16%) Query: 55 RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYG 113 R G +P +AE ++ ++ V G FI + P +L R ++ I+ EYG Sbjct: 119 RIKGANPKDLAEEWSSKFPCGDFLEKVEANGP-FIQFFFKPDFLFRVVVPDILTRKEEYG 177 Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173 + + +V +EF S N P H GH R ++G +A+L G+EV R Y+ D G Q Sbjct: 178 SCKLVENKRVILEFSSPNIAKPFHAGHLRSTIIGGFIANLYEKLGWEVIRMNYLGDWGKQ 237 Query: 174 INTLALSVFWRY--QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS------------ 219 LA+ F RY + AL + P + VY+K + K++ ++ S Sbjct: 238 FGLLAVG-FERYGSEDALAKD----PIHHLFEVYVK-INKDIEEEGDSLPLEESTNGKAR 291 Query: 220 ---ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276 + + +E+ L I K + ++ K I D LNI++D++ E + + Sbjct: 292 EYFKRMEDGDEEALKIWKRFRELSIEKYI-DTYARLNIKYDVYSGESQVSK---DSMNKA 347 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFA 335 I+ +G +E D+ +L T + + ++ KSDG+ Y Sbjct: 348 IEIFNEKGLTHE----------------DKGAVLIDLTKFNKKLGKTIVQKSDGTTLYLT 391 Query: 336 ADLAYFKCKYER-GFDNMIYVMGSD---HSG------------YVKRLE----AVAAAVS 375 D+ +YE+ FD MIYV+ S H+ + RL+ + +S Sbjct: 392 RDVGAAMDRYEKYKFDKMIYVIASQQDLHTAQFFEILKQMGFDWADRLQHINFGMVQGMS 451 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL---RHVVDEVGSDSVRFMMLWRKNS 432 +K + V L ++ ++ M M K + + V D VG +V + K Sbjct: 452 TRKGTV-VFLDNILEETKEKMHDVMKKNEAKYAQIEKPEEVADLVGISAVMIQDMQSKRI 510 Query: 433 ELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFP----DLDFDLFPRNVIPQ 487 +F + ++ + P Y+QYA++R RS+ R A +I P D DF L Sbjct: 511 NNYEFKWERMLSFEGDTGP--YLQYAHSRLRSVERNASEITPDKLLDADFSLLE------ 562 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL----ASVFHGHWSHGR 540 + + + LI LA+YP V+ N+ EP + YL+ L +S + W G+ Sbjct: 563 ----EPAAILLIRLLAQYPDVLRNSIKTHEPATVVTYLFKLTHQVSSCYDVLWVAGQ 615 >gi|325578263|ref|ZP_08148398.1| arginine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392] gi|325159999|gb|EGC72128.1| arginine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392] Length = 577 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 135/599 (22%), Positives = 236/599 (39%), Gaps = 114/599 (19%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LGL+P A+ ++ + + IAG GFIN++L+P++L + Sbjct: 37 GDYQANGIMAAAKKLGLNPREFAQKVLDHADLSDVAEKTEIAGPGFINIFLNPTWLANNV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 S+ + G + K T V I++ S N MHVGH R ++GD + + F G+ V Sbjct: 97 SA-ALKDQNLGVSANEKQTIV-IDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204 R ++ D G Q L L F+R + Y+ D E V Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHASEMELQDLEAFYREAKKHYDEDEAFAEKARNYV 214 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 V + D+Y + W +V D ++Q + D L + D+ + E Sbjct: 215 ----VKLQGGDEYCRTM-------WKKLV-DITMQQNQRNY-DRLNVTLTEKDV-MGESL 260 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 ++ P+ I+++L +QG E D L+ + P+ Sbjct: 261 YNPMLPA----IVEDLKKQGLAVE----------------DEGALVVYLDEFKNKEGEPM 300 Query: 325 ----LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 K DG + Y D+A K +YE D + + S ++++ A ++ K Sbjct: 301 GVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQHMQQ----AWLITRKAG 356 Query: 380 QI-NVLLCEL----VRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 + + E + L +DG P K R G + L ++DE Sbjct: 357 YVPDSFSLEHKNFGMMLGKDGKPFKT--RTGGTVKLADLLDEAIERATVLINEKNTNLSD 414 Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467 VG SV++ L + + FD+ + + N Y+QYAY R RSIF + Sbjct: 415 EEKTAVIEAVGIGSVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNK 473 Query: 468 AKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 A D+ P + + + D E L + L ++ ++ P+ L YLY Sbjct: 474 A---------DVNPTALAEAKIQLSDEKERALAIKLLQFEEAVQTVGKEGTPHVLCAYLY 524 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +LA +F + H + A + + + RL+L + GL ++G+++ +M Sbjct: 525 ELAGIFSSFYEH------CPILNAEDENVKLSRLKLASLTEKTLKQGLALLGIKTIEKM 577 >gi|323499566|ref|ZP_08104536.1| arginyl-tRNA synthetase [Vibrio sinaloensis DSM 21326] gi|323315439|gb|EGA68480.1| arginyl-tRNA synthetase [Vibrio sinaloensis DSM 21326] Length = 577 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 133/604 (22%), Positives = 238/604 (39%), Gaps = 124/604 (20%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG +P A+ ++ + +D IAG GFIN++LS +L K Sbjct: 37 GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAK-Q 95 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + ++ G + T V ++ + N MHVGH R ++GD + + F G++V Sbjct: 96 ADAALADTRLGVAEQAQQTIV-ADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGYYPG 203 R +I D G Q L L F+R + LY+ D + Sbjct: 155 RANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEAFYRESKKLYDEDEEFAVKARNY 214 Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 V V + D+Y +E+ W +V +Q ++ Sbjct: 215 V----VKLQGGDEYCAEM-------WKKLVDITMIQ---------------------NQR 242 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC---DMDRKQLLFR---STMVG 317 ++ R + S RD + + +Y +LPP + +K + D Q++F G Sbjct: 243 NYDRLNVSLTRDDVMGES----MYNDMLPPIVADLKEKGIAQEDDGAQVVFLDEYKNKDG 298 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEA 369 D + + K DG + Y D+A K +YE G D ++Y + S + V++ Sbjct: 299 DPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGY 358 Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429 V V+ + ++L +DG P K RAG + L ++DE +++ ++ Sbjct: 359 VPEEVTLEHHAFGMMLG------KDGRPFKT--RAGGTVRLADLLDEAEERAIK--LIES 408 Query: 430 KNSELLDFDFCKV---------------KEQSKE-------------NPVFYVQYAYARC 461 KN L + K+ K ++ + N Y+QYAY R Sbjct: 409 KNPSLETEEKTKIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRV 468 Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 SIF +A + D ++ E + E LI L ++ + + +P+ + Sbjct: 469 SSIFAKA-----GISVDQLAGDIKVTEEK----EKALIAKLLQFEEAVLSVAREGQPHIM 519 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 YL++LA F + + + + + RL+L A I GL+++G+E+ Sbjct: 520 CSYLFELAGQFSSFYEA------CPILNSEDESVKQSRLKLAALTAKTIKQGLSLLGIET 573 Query: 582 PNEM 585 M Sbjct: 574 LERM 577 >gi|319410738|emb|CBY91120.1| arginyl-tRNA synthetase (arginine-tRNA ligase; ArgRS) [Neisseria meningitidis WUE 2594] Length = 572 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 124/586 (21%), Positives = 240/586 (40%), Gaps = 80/586 (13%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEALADNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P +L + + + ++ +G K V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRPEFLAQNIQT-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++AF G V R+ ++ D G Q L + + + +DL + Y Sbjct: 144 RVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203 Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 AD + L +E L + K D S+ + D L ++ + E ++ Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323 ++ ++D+L ++G E D +++F G+ Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302 Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 + K G + Y + DLA + + R D ++YV+ + + ++L + + Sbjct: 303 VQKQGGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVG 362 Query: 383 VLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------- 416 + +DG P K R+GD + L ++ E Sbjct: 363 AAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEATKIG 420 Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 VG S+++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 421 KTVGIGSIKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG----- 474 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 ++D V+ + E QL L ++ V+++ P+ LA YLY +A++F Sbjct: 475 -EWDANAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSR 528 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + P L+ A+ RLQL + GL+++G++ Sbjct: 529 FY---EACPILKAEGASRNS----RLQLAKLTGDTLKQGLDLLGID 567 >gi|298491056|ref|YP_003721233.1| arginyl-tRNA synthetase ['Nostoc azollae' 0708] gi|298232974|gb|ADI64110.1| arginyl-tRNA synthetase ['Nostoc azollae' 0708] Length = 585 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 140/586 (23%), Positives = 235/586 (40%), Gaps = 83/586 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N A+ LS+ LG+ IA IV ++ + IAG GFINL L SYL L Sbjct: 40 GDFQANVALSLSKKLGMQARVIASAIVEKLDVSDICKPPEIAGPGFINLRLQTSYLESQL 99 Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 ++I G+ +N K ++F S N MHVGH R ++GD +A ++ F G+ Sbjct: 100 NAIKTDSRLGVPKTKN----SQKEIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFHGH 155 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 EV R ++ D G Q L + Y +AL ++ L G Y + + AD+ Sbjct: 156 EVLRLNHVGDWGTQFGMLITYLREVYPEALTTANA-LDIGDLVTFYRQAKQRFDADE--- 211 Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID- 278 F E +V+ + + D L A + + E R + I D+++ Sbjct: 212 ---TFQETARQEVVR------LQAGVEDTLHAWKL-----LCEQ--SRREFQVIYDLLNV 255 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-----PLL--KSDGSY 331 NL +G + P + +K + + + + +R PL+ KSDG Y Sbjct: 256 NLIERGESFYNPFLPAVVEDLEKTGLLEENQGAKCVFLDGFTNREGEPLPLIIQKSDGGY 315 Query: 332 TYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 Y DLA + + E+ +IYV + + + + +A + + ++ Sbjct: 316 NYATTDLACLRYRIEKDQAKRIIYVTDAGQANHFTQFMQLAKKANWIPDDVELVHVPFGL 375 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE-------------------------------VGS 419 + D K R+GD + LR ++DE VG Sbjct: 376 VLGDNRK-KFKTRSGDTVRLRDLLDEAVSRTRADLEARLIEEGREETEEFIKNVAEVVGI 434 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 +V++ L + + F + K+ K N Y+ YAY R + I R+ F +L D Sbjct: 435 SAVKYADLSQNRTSNYVFSYDKML-ALKGNTAPYMLYAYVRTQGISREGNIDFENLGTD- 492 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 ++ +E +EL L L + VI P +L YLY+L+ F+ + + Sbjct: 493 --TKILLKED----AELTLAKDLLQLDEVISEVEQDLLPNRLCDYLYNLSDKFNKFYENC 546 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P L+ + RL L A + GL+++G++ M Sbjct: 547 ---PVLK----SEEPTRTSRLMLCDLTAKTLKLGLDLLGIKVLERM 585 >gi|212711950|ref|ZP_03320078.1| hypothetical protein PROVALCAL_03025 [Providencia alcalifaciens DSM 30120] gi|212685472|gb|EEB45000.1| hypothetical protein PROVALCAL_03025 [Providencia alcalifaciens DSM 30120] Length = 576 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 139/604 (23%), Positives = 243/604 (40%), Gaps = 125/604 (20%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ +G+ P +AE IV+++ ++ V IAG GFIN+++ P+++ Sbjct: 37 GDYQANGVMGAAKKMGMPPRQLAEQIVSQLDLEGIASKVEIAGPGFINIFIDPTWIAAHA 96 Query: 103 SSIVVSGIEYGRNLIG----KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158 + S + +G K + I++ + N MHVGH R ++GD A F G Sbjct: 97 EKALTS------DRLGLAPVKAETIVIDYSAPNVAKQMHVGHLRSTIIGDAAARTQEFIG 150 Query: 159 YEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDL---P 197 ++V R ++ D G Q L L F+R + Y+ D D Sbjct: 151 HKVIRANHVGDWGTQFGMLIAYLEKVQNEDASDMALADLEEFYREAKKHYDEDEDFAVRA 210 Query: 198 EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257 GY V + D+Y ++ W +V D ++Q + R + + Sbjct: 211 RGYV-------VKLQSGDEYCRKM-------WRKLV-DITMQQNQETYR--------RLN 247 Query: 258 IFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 + ++EDD G+ S + I+ +L +G E S+ +D F++ Sbjct: 248 VTLTEDDV-MGESLYNSMLPGIVADLKAKGLAVE-------SEGATVVFLDE----FKNK 295 Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV--- 370 G+ + + K DG + Y D+A K +YE D +Y + S ++ + + Sbjct: 296 E-GEPMGVIVQKKDGGFLYTTTDIACAKYRYETLHADRSLYYIDSRQHQHLMQAWTIVRK 354 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------- 416 A + E A + + + L +DG P K R+G + L ++DE Sbjct: 355 AGYIPESMALEHHMFGMM--LGKDGKPFK--TRSGGTVRLSDLLDEAVERAQTLIREKNP 410 Query: 417 -------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463 VG +V++ L + + FD+ + + N Y+QYAY R S Sbjct: 411 DMAEDELLNLANVVGIGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVAS 469 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE--PYKL 521 IF++A DL + P E+ L L ++ I T+A+E P+ + Sbjct: 470 IFKKADITESDLTLPIVLE--APH-------EMALATRLMQFEETI--LTVAREGTPHVM 518 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 YLYDLA +F + H + A+ RL+L + GL+ +G+E+ Sbjct: 519 CAYLYDLAGLFSSFYEH------CPILSADTDAQRQSRLKLALLTQKTLKVGLDTLGIET 572 Query: 582 PNEM 585 M Sbjct: 573 VERM 576 >gi|301170344|emb|CBW29950.1| arginyl-tRNA synthetase [Haemophilus influenzae 10810] Length = 577 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 138/594 (23%), Positives = 236/594 (39%), Gaps = 104/594 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LGL+P A+ ++ ++ + + IAG GFIN++L+P++L + Sbjct: 37 GDYQANGIMAAAKKLGLNPREFAQKVLDNAQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 S+ +S G K T V I++ S N MHVGH R ++GD + + F G+ V Sbjct: 97 SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVTRTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220 R ++ D G Q L + Q + ++ +L E +Y A K+ E Sbjct: 155 RANHVGDWGTQFGMLI--AYLEKMQNEHASEMELQDLEAFY----------REAKKHYDE 202 Query: 221 LLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNIQH-----DIFISEDDFHRGDP- 270 F E+ +VK D + M K + D N QH ++ ++E D G+ Sbjct: 203 DEIFAEKARNYVVKLQSGDEYCRTMWKRLVDITMQQN-QHNYDRLNVTLTEKDV-MGESL 260 Query: 271 -SP-IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 +P + I+++L +QG E G L + K GD + + K Sbjct: 261 YNPMLPSIVEDLKKQGLAVENDGALVVYLDEFKNK--------------EGDPMGVIVQK 306 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY--------VKRLEAVAAAVSEKK 378 DG + Y D+A K +YE N V ++ V + S + Sbjct: 307 KDGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEH 366 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 ++L +DG P K R G + L ++DE Sbjct: 367 KNFGMMLG------KDGKPFKT--RTGGTVKLADLLDEAIERATVLINEKNTNLSNDEKE 418 Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VG +V++ L + + FD+ + + N Y+QYAY R RSIF + Sbjct: 419 AVIEAVGIGAVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNKT--- 474 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 D + P + D E L + L ++ ++ P+ L YLY+LA + Sbjct: 475 ----DINSTALLAAPLTIK-DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYELAGI 529 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + H + A + + + RL+L + GL ++G+++ +M Sbjct: 530 FSSFYEH------CPILNAEDESIKLSRLKLALLTEKTLKQGLTLLGIKTVEKM 577 >gi|37679228|ref|NP_933837.1| arginyl-tRNA synthetase [Vibrio vulnificus YJ016] gi|39932019|sp|Q7MMM3|SYR_VIBVY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|37197971|dbj|BAC93808.1| arginyl-tRNA synthetase [Vibrio vulnificus YJ016] Length = 577 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 134/603 (22%), Positives = 238/603 (39%), Gaps = 122/603 (20%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG +P A+ ++ + +D IAG GFIN++LS +L K Sbjct: 37 GDYQANGVMGVAKQLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96 Query: 103 SSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + G+ E + ++ ++ + N MHVGH R ++GD + + F Sbjct: 97 EAALADPRLGVASEEAQTIVA-------DYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFL 149 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYY-PGVYLKHVGKELA 214 G++V R +I D G Q L ++ R QQ +L EG+Y L +E A Sbjct: 150 GHKVIRANHIGDWGTQFGML-IANLERVQQESGEVSMELADLEGFYRESKKLYDEDEEFA 208 Query: 215 DKYSSELL------NFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNIQHDIFIS 261 K ++ F E W +V +Q + + RDD+ ++ +D+ Sbjct: 209 VKARGYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESMYNDM--- 265 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GD 318 + I+ +L QG E D Q++F G+ Sbjct: 266 -----------LPKIVADLKAQGLAVED---------------DGAQVVFLEEFKNKDGE 299 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370 + + K DG + Y D+A K +YE G D ++Y + S + V++ V Sbjct: 300 PMGVIVQKRDGGFLYTTTDIACAKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYV 359 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430 +VS + ++L +DG P K RAG + L ++DE + + ++ K Sbjct: 360 PESVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRAAQ--LIESK 409 Query: 431 NSELLD--------------FDFCKVKEQSKENPVF--------------YVQYAYARCR 462 N EL + + + + + VF Y+QYAY R Sbjct: 410 NPELAEDEKKAIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVA 469 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 S+F +A DL ++ D E LI L ++ +++ +P+ + Sbjct: 470 SVFAKAGVSMDDLQGEI---------KITDEKEKALIAKLMQFEEAVQSVAREGQPHIMC 520 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 YL++LA F + + A + + RL+L A I GL+++G+++ Sbjct: 521 SYLFELAGQFSSFYEA------CPILVAEDEAVKQSRLKLAALTAKTIKQGLSLLGIDTL 574 Query: 583 NEM 585 M Sbjct: 575 ERM 577 >gi|260494813|ref|ZP_05814943.1| arginyl-tRNA synthetase [Fusobacterium sp. 3_1_33] gi|260197975|gb|EEW95492.1| arginyl-tRNA synthetase [Fusobacterium sp. 3_1_33] Length = 569 Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 136/581 (23%), Positives = 250/581 (43%), Gaps = 88/581 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AMI S+ +G +P IAE I V+ + +AG GFIN++LS Y I Sbjct: 39 GDYQCNFAMINSKVIGDNPRKIAEKIKNNFPYGNVVEKLEVAGPGFINIFLSDKY---IS 95 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 SI G +Y + + + KV ++F S N MH+GH R ++G+++ + + GY+V Sbjct: 96 DSIKKIGEDYDFSFLNRKGKVIVDFSSPNIAKRMHIGHLRSTIIGESVCRIYRYLGYDVV 155 Query: 163 REYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVGK-----ELADK 216 + +I D G Q L + W ++A N + E VY+K + L D Sbjct: 156 ADNHIGDWGTQFGKLIVGYRKWLNREAYEKNAIEELE----RVYVKFSDEAEKDPSLEDL 211 Query: 217 YSSEL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274 +EL + EE+ + K++ ++ +K K L++ D + E ++ + Sbjct: 212 ARAELKKVQDGEEENTKLWKEFITES-LKEYNKLYKRLDVHFDTYYGESFYN----DMMA 266 Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334 D++ L +G + + + D K LF + K DG+Y Y Sbjct: 267 DVVKELIDKGLAVD-------DEGAKVVFFDEKDNLFPCI---------VQKKDGAYLYS 310 Query: 335 AADLAYFKC-KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393 +D+A K K + MIY+ + + K+ + + + ++ ++R + Sbjct: 311 TSDIATVKFRKNTYDVNKMIYLTDARQQDHFKQFFKITDMLDWNIEKYHIWFG-IIR-FA 368 Query: 394 DGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMM 426 DG+ +S R G+ I L ++DE VG SV++ Sbjct: 369 DGI---LSTRKGNVIKLEELLDEAHNRAYDVVNEKNPNLSEEEKQNIAEVVGVSSVKYAD 425 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 L + + F++ K+ + N Y+ Y YAR +SI R+ + DL+ ++ I Sbjct: 426 LSQNKQSDIIFEWDKML-SFEGNTAPYLLYTYARIQSILRKVAEQNIDLNENI----EIK 480 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 +++F+ S L +L +P + A +P +A YLY+L+ + +++ P L Sbjct: 481 TDNKFEKS---LATYLLAFPISVLKAAETFKPNLIADYLYELSKKLNSFYNNC---PIL- 533 Query: 547 FVQANNRKLTMM--RLQLVHAVASIINSGLNIIGVESPNEM 585 N+ + + R L+ ++ GL ++G+ N+M Sbjct: 534 -----NQDIETLKSRALLIRKTGKVLKDGLGLLGIPVLNKM 569 >gi|320157028|ref|YP_004189407.1| arginyl-tRNA synthetase [Vibrio vulnificus MO6-24/O] gi|319932340|gb|ADV87204.1| arginyl-tRNA synthetase [Vibrio vulnificus MO6-24/O] Length = 577 Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 134/603 (22%), Positives = 239/603 (39%), Gaps = 122/603 (20%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG +P A+ ++ + +D IAG GFIN++LS +L K Sbjct: 37 GDYQANGVMGVAKQLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96 Query: 103 SSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + G+ E + ++ ++ + N MHVGH R ++GD + + F Sbjct: 97 EAALADPRLGVASEEAQTIVA-------DYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFL 149 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYY-PGVYLKHVGKELA 214 G++V R +I D G Q L ++ R QQ +L EG+Y L +E A Sbjct: 150 GHKVIRANHIGDWGTQFGML-IANLERVQQESGEVSMELADLEGFYRESKKLYDEDEEFA 208 Query: 215 DKYSSELL------NFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNIQHDIFIS 261 K + ++ F E W +V +Q + + RDD+ ++ +D+ Sbjct: 209 VKARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESMYNDM--- 265 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GD 318 + I+ +L QG E D Q++F G+ Sbjct: 266 -----------LPKIVADLKAQGLAVED---------------DGAQVVFLDEFKNKDGE 299 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370 + + K DG + Y D+A K +YE G D ++Y + S + V++ V Sbjct: 300 PMGVIVQKRDGGFLYTTTDIACAKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYV 359 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430 +VS + ++L +DG P K RAG + L ++DE + + ++ K Sbjct: 360 PESVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRAAQ--LIESK 409 Query: 431 NSELLD--------------FDFCKVKEQSKENPVF--------------YVQYAYARCR 462 N EL + + + + + VF Y+QYAY R Sbjct: 410 NPELAEDEKKAIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVA 469 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 S+F +A DL ++ D E LI L ++ +++ +P+ + Sbjct: 470 SVFAKAGVSMDDLQGEI---------KITDEKEKALIAKLMQFEEAVQSVAREGQPHIMC 520 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 YL++LA F + + A + + RL+L A I GL+++G+++ Sbjct: 521 SYLFELAGQFSSFYEA------CPILVAEDEAVKQSRLKLAALTAKTIKQGLSLLGIDTL 574 Query: 583 NEM 585 M Sbjct: 575 ERM 577 >gi|27363628|ref|NP_759156.1| arginyl-tRNA synthetase [Vibrio vulnificus CMCP6] gi|31077005|sp|Q8DFR1|SYR_VIBVU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|27359744|gb|AAO08683.1| arginyl-tRNA synthetase [Vibrio vulnificus CMCP6] Length = 577 Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 134/603 (22%), Positives = 238/603 (39%), Gaps = 122/603 (20%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG +P A+ ++ + +D IAG GFIN++LS +L K Sbjct: 37 GDYQANGVMGVAKQLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96 Query: 103 SSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + G+ E + ++ ++ + N MHVGH R ++GD + + F Sbjct: 97 EAALADPRLGVASEEAQTIVA-------DYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFL 149 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYY-PGVYLKHVGKELA 214 G++V R +I D G Q L ++ R QQ +L EG+Y L +E A Sbjct: 150 GHKVIRANHIGDWGTQFGML-IANLERVQQESGEVSMELADLEGFYRESKKLYDEDEEFA 208 Query: 215 DKYSSELL------NFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNIQHDIFIS 261 K ++ F E W +V +Q + + RDD+ ++ +D+ Sbjct: 209 VKARGYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESMYNDM--- 265 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GD 318 + I+ +L QG E D Q++F G+ Sbjct: 266 -----------LPKIVADLKAQGLAVED---------------DGAQVVFLEEFKNKDGE 299 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370 + + K DG + Y D+A K +YE G D ++Y + S + V++ V Sbjct: 300 PMGVIVQKRDGGFLYTTTDIACAKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYV 359 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430 +VS + ++L +DG P K RAG + L ++DE + + ++ K Sbjct: 360 PESVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRAAQ--LIESK 409 Query: 431 NSELLD--------------FDFCKVKEQSKENPVF--------------YVQYAYARCR 462 N EL + + + + + VF Y+QYAY R Sbjct: 410 NPELAEDEKKAIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVA 469 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 S+F +A DL ++ D E LI L ++ +++ +P+ + Sbjct: 470 SVFAKAGVSMDDLQGEI---------KITDEKEKALIAKLMQFEEAVQSVAREGQPHIMC 520 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 YL++LA F + + A + + RL+L A I GL+++G+++ Sbjct: 521 SYLFELAGQFSSFYEA------CPILVAEDEAVKQSRLKLAALTAKTIKQGLSLLGIDTL 574 Query: 583 NEM 585 M Sbjct: 575 ERM 577 >gi|255526642|ref|ZP_05393548.1| arginyl-tRNA synthetase [Clostridium carboxidivorans P7] gi|296186101|ref|ZP_06854506.1| arginyl-tRNA synthetase [Clostridium carboxidivorans P7] gi|255509675|gb|EET86009.1| arginyl-tRNA synthetase [Clostridium carboxidivorans P7] gi|296049369|gb|EFG88798.1| arginyl-tRNA synthetase [Clostridium carboxidivorans P7] Length = 563 Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 141/582 (24%), Positives = 243/582 (41%), Gaps = 111/582 (19%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIE 111 LS+ L P IAE + +I D + + + G ++N ++ + + + ++ +G + Sbjct: 44 LSKTLRKAPNAIAEELKEKINKD-NFEKIENLGP-YLNFFVDKIDFTKNTIEKVLENGDK 101 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG + IG G + I++ S N P HVGH +G+ L +++F GY ++ D G Sbjct: 102 YGSSDIGTGKNITIDYSSPNIAKPFHVGHLCSTSIGNALYRILSFQGYNCIGINHLGDWG 161 Query: 172 AQINTLALSVFWRY--QQALYNNDSDLPEGYYPGVYLK-HVGKE----LADKYSSELLNF 224 Q L +S + R+ ++ L P +Y+K H E L D+ N Sbjct: 162 TQFGKL-ISAYKRWCDEEVLEKE----PIKELLRIYVKFHEEAEKDTSLEDEARLHFKNL 216 Query: 225 P-----EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279 E K KD S++ K++ D L I+ D + E ++ + +ID Sbjct: 217 EDGCEEETKLWQRFKDLSLKEF-KVVYD---MLGIKFDYYTGESFYN----DKMDAVID- 267 Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRP---LLKSDGSYT 332 ++D+K LL S ++ D+ + P + K+DG+ Sbjct: 268 -----------------------EIDKKGLLVESNGAKVVMLDEYNMPPCIIKKADGATI 304 Query: 333 YFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCEL 388 Y DLA Y K Y+ F IYV+GSD S + K+L + A + L Sbjct: 305 YATRDLAAATYRKKTYD--FYKSIYVVGSDQSLHFKQLFTTLKLMGHDWADDCKHVAFGL 362 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------VGSDSVR 423 VR K+S R GD I L +++E +G +V Sbjct: 363 VRF----ADKKLSTRKGDVIFLEDLLNESVEKTLEVINEKNPDLENKEEVSKKIGIGAVI 418 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 F L + + FD+ ++ E YVQY+YAR +SI R+A ++ D+D+ Sbjct: 419 FTYLKNNREKDIIFDWKEILSFDGETGP-YVQYSYARGKSILRRAGEVEGDIDYSKLNSK 477 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 E +L+ L + + I A EPY + Y+ D+A F+ ++ Sbjct: 478 ----------EEFELVKTLEGFQKSILYAIDKLEPYIVTRYIIDVAKGFNKFYNAH---- 523 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A + + R++LV A ++ +GLN+IG+E+ +M Sbjct: 524 --SIMNAEDEATKIARIKLVEATCQVLKNGLNLIGIETVEKM 563 >gi|323493320|ref|ZP_08098443.1| arginyl-tRNA synthetase [Vibrio brasiliensis LMG 20546] gi|323312406|gb|EGA65547.1| arginyl-tRNA synthetase [Vibrio brasiliensis LMG 20546] Length = 577 Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 133/606 (21%), Positives = 230/606 (37%), Gaps = 128/606 (21%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-- 100 G N M +++ LG +P A+ ++ + ++ IAG GFIN++LS +L K Sbjct: 37 GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLEGIASKTEIAGPGFINIFLSEEFLAKQA 96 Query: 101 ---ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + S + E + ++ ++ + N MHVGH R ++GD + + F Sbjct: 97 DAALADSRLGVAAEEQKTIVA-------DYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFL 149 Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198 G++V R +I D G Q L L F+R + LY+ D + Sbjct: 150 GHKVIRANHIGDWGTQFGMLIANLERVQQDSGEVSMELADLEAFYRESKKLYDEDEEFAV 209 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 V G E F E W +V +Q Sbjct: 210 KARNYVVKLQSGDE-----------FCGEMWKKLVDITMIQ------------------- 239 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV-- 316 ++ ++ R + S RD + + ++ GI+ K K D D Q++F Sbjct: 240 --NQRNYDRLNVSLTRDDVMGESMYNHMLPGIVADLKQKELAVED-DGAQVVFLEEYKNK 296 Query: 317 -GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRL 367 GD + + K DG + Y D+A K +YE G D ++Y + S + V++ Sbjct: 297 DGDPMGVIIQKRDGGFLYTTTDIACAKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKA 356 Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 V VS + ++L +DG P K RAG + L ++DE + + ++ Sbjct: 357 GYVPEEVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEERAAK--LI 406 Query: 428 WRKNSEL-----------LDFDFCKVKEQSKE-----------------NPVFYVQYAYA 459 KN +L + K + SK N Y+QYAY Sbjct: 407 ESKNPDLAADEKEKISTTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYT 466 Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 R SIF +A + D N+ + D E LI L ++ +++ +P+ Sbjct: 467 RVSSIFAKA-----GISMD----NLTGEIKVTDEKEKALIAKLLQFDEAVQSVAREGQPH 517 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 + YL++LA F + + + + RL+L A I GL+++G+ Sbjct: 518 IMCSYLFELAGQFSSFYE------ACPILNTEDETVKQSRLKLAALTAKTIKQGLSLLGI 571 Query: 580 ESPNEM 585 ++ M Sbjct: 572 DTLERM 577 >gi|269960720|ref|ZP_06175092.1| Arginyl-tRNA synthetase [Vibrio harveyi 1DA3] gi|269834797|gb|EEZ88884.1| Arginyl-tRNA synthetase [Vibrio harveyi 1DA3] Length = 577 Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 134/601 (22%), Positives = 237/601 (39%), Gaps = 118/601 (19%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG +P A+ ++ + +D IAG GFIN++LS +L K Sbjct: 37 GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96 Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 + + G+ + + ++ + N MHVGH R ++GD + + F G+ Sbjct: 97 EAALTDSRLGV-----AADEAQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGH 151 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYY-PGVYLKHVGKELADK 216 +V R +I D G Q L ++ R QQ +L EG+Y L +E A K Sbjct: 152 KVIRANHIGDWGTQFGML-IANLERVQQESGEVSMELADLEGFYRESKKLYDEDEEFAVK 210 Query: 217 YSSELL------NFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNIQHDIFISED 263 + ++ F E W +V +Q + + RDD+ ++ +D+ Sbjct: 211 ARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESMYNDML---- 266 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDV 320 P I+ +L QG E D Q++F G+ + Sbjct: 267 ------PK----IVADLKAQGLAVED---------------DGAQVVFLEEFKNKDGEAM 301 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAA 372 + K DG + Y D+A K +YE G D ++Y + S + V++ V Sbjct: 302 GVIVQKRDGGFLYTTTDIACAKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYVPE 361 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 +VS + ++L +DG P K RAG + L ++DE + + ++ KN Sbjct: 362 SVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRAAQ--LIESKNP 411 Query: 433 ELLD--------------FDFCKVKEQSKENPVF--------------YVQYAYARCRSI 464 EL + + + + + VF Y+QYAY R S+ Sbjct: 412 ELAEDEKKAIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASV 471 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 F +A DL ++ D E LI L ++ +++ +P+ + Y Sbjct: 472 FAKAGVSMDDLQGEI---------KITDEKEKALIAKLMQFEEAVQSVAREGQPHIMCSY 522 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 L++LA F + + A + + RL+L A I GL+++G+++ Sbjct: 523 LFELAGQFSSFYEA------CPILVAEDEAVKQSRLKLAALTAKTIKQGLSLLGIDTLER 576 Query: 585 M 585 M Sbjct: 577 M 577 >gi|294785848|ref|ZP_06751136.1| arginine--tRNA ligase [Fusobacterium sp. 3_1_27] gi|294487562|gb|EFG34924.1| arginine--tRNA ligase [Fusobacterium sp. 3_1_27] Length = 569 Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 141/587 (24%), Positives = 253/587 (43%), Gaps = 100/587 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AMI S+ +G +P IAE I V+ + +AG GFIN++LS Y I Sbjct: 39 GDYQCNFAMINSKIIGDNPRKIAEEIKNNFSCGDVVEKLEVAGPGFINIFLSDKY---IS 95 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 +SI G Y + + + KV I+F S N MH+GH R ++G+ + + F GY+V Sbjct: 96 NSIKKIGENYDFSFLNRKGKVIIDFSSPNIAKRMHIGHLRSTIIGEAVCRIYKFLGYDVV 155 Query: 163 REYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVGK-----ELADK 216 + +I D G Q L + W ++A N + E VY+K + L D Sbjct: 156 ADNHIGDWGTQFGKLIVGYRKWLNREAYKKNAIEELE----RVYVKFSDEAEKDPSLEDL 211 Query: 217 YSSELLNFP--EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274 +EL EE+ + K++ ++ +K K L++ D + E ++ ++ Sbjct: 212 ARAELKKVQDGEEENTKLWKEFITES-LKEYNKLYKRLDVHFDTYYGESFYNDMMADVVK 270 Query: 275 DIID-NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR--PLL--KSDG 329 +++D LA D D +++F D+ D P + K DG Sbjct: 271 ELVDKKLA--------------------VDDDGAKVVF-----FDEKDNLFPCIVQKKDG 305 Query: 330 SYTYFAADLAYFKC-KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 +Y Y +D+A K K + MIY+ + + K+ + + + ++ + Sbjct: 306 AYLYSTSDIATVKFRKNTYDVNRMIYLTDARQQDHFKQFFKITDMLGWNIEKYHIWFG-I 364 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDS 421 +R + DG+ +S R G+ I L ++DE VG S Sbjct: 365 IR-FADGI---LSTRKGNVIKLEELLDEAHSRAYDVVNEKNPNLSEEEKQNIAEVVGVSS 420 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 V++ L + + F++ K+ + N Y+ Y YAR +SI R+ + DL+ Sbjct: 421 VKYADLSQNKQSDIIFEWDKML-SFEGNTAPYLLYTYARIQSILRKVTEQNIDLN----- 474 Query: 482 RNV-IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 +N+ I +++F+ S L +L +P + A +P +A YLY+L+ + +++ Sbjct: 475 KNIEIKTDNKFEKS---LATYLLVFPISVLKAAETFKPNLIADYLYELSKKLNSFYNNC- 530 Query: 541 ENPRLRFVQANNRKLTMM--RLQLVHAVASIINSGLNIIGVESPNEM 585 P L N+ + + R L+ ++ GL ++G+ N+M Sbjct: 531 --PIL------NQDIETLKSRTLLIKKTGEVLKEGLGLLGIPVLNKM 569 >gi|15677359|ref|NP_274514.1| arginyl-tRNA synthetase [Neisseria meningitidis MC58] gi|23822209|sp|Q9JYM8|SYR_NEIMB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|7226749|gb|AAF41862.1| arginyl-tRNA synthetase [Neisseria meningitidis MC58] gi|316986039|gb|EFV64976.1| arginyl-tRNA synthetase [Neisseria meningitidis H44/76] gi|325140638|gb|EGC63156.1| arginyl-tRNA synthetase [Neisseria meningitidis CU385] gi|325199890|gb|ADY95345.1| arginyl-tRNA synthetase [Neisseria meningitidis H44/76] Length = 572 Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 125/586 (21%), Positives = 240/586 (40%), Gaps = 80/586 (13%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 IV++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 IVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEALADNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P +L + + + ++ +G K V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRPEFLAQNIQT-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++AF G V R+ ++ D G Q L + + + +DL + Y Sbjct: 144 RVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203 Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 AD + L +E L + K D S+ + D L ++ + E ++ Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323 ++ ++D+L ++G E D +++F G+ Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302 Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 + K G + Y + DLA + + R D ++YV+ + + ++L + + Sbjct: 303 VQKQGGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVG 362 Query: 383 VLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------- 416 + +DG P K R+GD + L ++ E Sbjct: 363 AAFIGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIG 420 Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 VG +V++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 421 KTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG----- 474 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 ++D V+ + E QL L ++ V+++ P+ LA YLY +A++F Sbjct: 475 -EWDANAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSR 528 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + P L+ A+ RLQL + GL+++G++ Sbjct: 529 FY---EACPILKAEGASRNS----RLQLAKLTGDTLKQGLDLLGID 567 >gi|156973665|ref|YP_001444572.1| arginyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116] gi|166200586|sp|A7MT26|SYR_VIBHB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|156525259|gb|ABU70345.1| hypothetical protein VIBHAR_01368 [Vibrio harveyi ATCC BAA-1116] Length = 577 Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 134/601 (22%), Positives = 237/601 (39%), Gaps = 118/601 (19%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG +P A+ ++ + +D IAG GFIN++LS +L K Sbjct: 37 GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96 Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 + + G+ + + ++ + N MHVGH R ++GD + + F G+ Sbjct: 97 EAALADSRLGV-----AADEAQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGH 151 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYY-PGVYLKHVGKELADK 216 +V R +I D G Q L ++ R QQ +L EG+Y L +E A K Sbjct: 152 KVIRANHIGDWGTQFGML-IANLERVQQESGEVSMELADLEGFYRESKKLYDEDEEFAVK 210 Query: 217 YSSELL------NFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNIQHDIFISED 263 + ++ F E W +V +Q + + RDD+ ++ +D+ Sbjct: 211 ARNYVVKLQSGDEFCAEMWKKLVDVTMIQNQRNYDRLNVSLSRDDVMGESMYNDML---- 266 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDV 320 P I+ +L QG E D Q++F G+ + Sbjct: 267 ------PK----IVADLKAQGLAVED---------------DGAQVVFLEEFKNKDGEAM 301 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAA 372 + K DG + Y D+A K +YE G D ++Y + S + V++ V Sbjct: 302 GVIVQKRDGGFLYTTTDIACAKYRYEELGADRVLYFIDSRQHQHLMQAWTIVRKAGYVPE 361 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 +VS + ++L +DG P K RAG + L ++DE + + ++ KN Sbjct: 362 SVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRAAQ--LIESKNP 411 Query: 433 ELLD--------------FDFCKVKEQSKENPVF--------------YVQYAYARCRSI 464 EL + + + + + VF Y+QYAY R S+ Sbjct: 412 ELAEDEKKAIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASV 471 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 F +A DL ++ D E LI L ++ +++ +P+ + Y Sbjct: 472 FAKAGVSMDDLQGEI---------KITDEKEKALIAKLMQFEEAVQSVAREGQPHIMCSY 522 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 L++LA F + + A + + RL+L A I GL+++G+++ Sbjct: 523 LFELAGQFSSFYEA------CPILVAEDEAVKQSRLKLAALTAKTIKQGLSLLGIDTLER 576 Query: 585 M 585 M Sbjct: 577 M 577 >gi|268319019|ref|YP_003292675.1| hypothetical protein FI9785_528 [Lactobacillus johnsonii FI9785] gi|262397394|emb|CAX66408.1| argS [Lactobacillus johnsonii FI9785] Length = 558 Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 147/602 (24%), Positives = 256/602 (42%), Gaps = 115/602 (19%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 ++IERP++ G + A L++ +P IA+ I +I D S+ G ++N Sbjct: 24 MLIERPKNPKMGDYAF-PAFALAKIEHKNPALIAKDISEKIS-DDSFTSIQAVGP-YVNF 80 Query: 92 YLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + + L L+ ++ +G +G+G V I+ S N PM +GH R V+G+++ Sbjct: 81 AIDHAKLVNATLNDVLTEKEHFGDQKLGEGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSI 139 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV---YLK 207 A + GY + Y+ D G Q L + +R L+ N+ D+ + + Y+K Sbjct: 140 AKTLEKVGYTPIKINYLGDYGTQFGKLITA--YR----LWGNEEDVKKDPITNLFHYYVK 193 Query: 208 -HVGKELADKYSSE-------LLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNI 254 H E K E L N EE KW ++ S+Q +I K L + Sbjct: 194 FHEEAEKDPKLEDEGRAAFKKLENGDEEEIKLWKWF---REVSLQEFNRI----YKELGV 246 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 D + E F+ ++ ++D L +G + E S+ Q ++ Sbjct: 247 TFDSYNGEAFFN----DKMQPVVDELKEKGLLEE-------SRGAQVVNL---------- 285 Query: 315 MVGDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 G+D + L LKSDGS Y DLA Y K +Y+ F +YV G + +G+ K+L+ V Sbjct: 286 --GEDENPALILKSDGSSLYMTRDLAAALYRKKEYD--FVMSLYVAGGEQTGHFKQLKQV 341 Query: 371 -----------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407 +S +K + V L ++++ ++ ++ + Sbjct: 342 LKKMGYDWSDNIHHIPFGLITQGGKKLSTRKGNV-VFLDQVLKDAVSLAEQQIEEKNPNL 400 Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFR 466 + V +VG +V F L + DFD + V+ + P YVQY AR +SI R Sbjct: 401 SNKKQVAHDVGVGAVVFHDLKNDRMDNFDFDLEEVVRFEGDTGP--YVQYTNARAQSILR 458 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 +A ++ D N D + LA++P +++ A+ EP +A Y Sbjct: 459 KAN---KEISMDNLSLN--------DDWSFAVAKALADFPAIVKKASEKFEPSIIAKYAL 507 Query: 527 DLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 DL+ F+ ++++ R E+ +L RL LV A + ++ L ++GV +P Sbjct: 508 DLSKKFNKYYANVRILDEDDQLN-----------ARLALVQATSIVLTEALRLLGVNAPK 556 Query: 584 EM 585 EM Sbjct: 557 EM 558 >gi|325684309|gb|EGD26480.1| arginine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 565 Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 148/604 (24%), Positives = 257/604 (42%), Gaps = 113/604 (18%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + IERP+D G + L++ + P IA + KID A +IN Sbjct: 25 VKIERPKDEKLGDYAF-PTFTLAKTMRKAPNLIAAELAE--KIDQGSFEKVEAVGPYINF 81 Query: 92 YLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +L S IL I+ YG +G G V+ E+ S N PM +GH R ++G+ + Sbjct: 82 FLDKSQTGAAILREILADPENYGARDLGHGRNVSTEYSSPNIAKPMGMGHLRSTMIGEAI 141 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE-------GYYPG 203 A ++A G++ R Y+ D G Q + + ++ ND+D+ + YY Sbjct: 142 ARILAKEGFKPIRIDYLGDWGTQFGKMMAAY------KMWGNDADIEKDPINTLLSYY-- 193 Query: 204 VYLKHVGKELAD------KYSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDDLKALNIQ 255 V + +E + ++ S+L + EE + ++ S++ K+ L++ Sbjct: 194 VRINREAEEHPEYDEEGREWFSKLEHGDEEAKRLWSWFREVSLERFKKV----YNMLDVH 249 Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315 D F E + PI+ + R+ +G+L KS+ + D+++ L Sbjct: 250 FDSFTGEAFSAQMMDEPIQ-----ILRE----KGLLV--KSQGAEIVDLEKYNL------ 292 Query: 316 VGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 PL+ KS+G+ TY DLA Y K Y+ F IYV+G + Y ++L A Sbjct: 293 ------PPLMVIKSNGTSTYITRDLATAMYRKKTYD--FYKSIYVVGQEQEVYFQQLRAC 344 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------- 416 + A +++ + +G KMS R G+ + L V++E Sbjct: 345 LKEMGFDWAD-DIVHISFGLMSINGQ--KMSTRKGNVVNLEDVLNESVDLARKQISEKNV 401 Query: 417 -----------VGSDSVRFMML--WRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCR 462 VG +V F L +R+N +DF+ + VK + + P YVQY+ AR Sbjct: 402 GLKNADEVAKQVGIGAVVFHDLKNYRRNP--VDFNLEEVVKFEGETGP--YVQYSRARGE 457 Query: 463 SIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 + R++ F D D ++ E L+ + Y I+ A +P + Sbjct: 458 RLLRKSGITDFSDADL-----------TKIGAEEWDLVSFMGRYADTIQKAMETYDPSAI 506 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 A Y +LA F+ +++H R V + + RL +V AV+ +I S L+++ V++ Sbjct: 507 AKYALELAKRFNKYYAHTR-----ILVDDVDEDVKKARLAVVQAVSHVIKSALDLLDVKA 561 Query: 582 PNEM 585 P+EM Sbjct: 562 PDEM 565 >gi|300855348|ref|YP_003780332.1| arginyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528] gi|300435463|gb|ADK15230.1| arginyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528] Length = 564 Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 139/548 (25%), Positives = 229/548 (41%), Gaps = 110/548 (20%) Query: 88 FINLYL-SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N ++ ++ + L ++ G YG++ +GKG V +EF S N P HVGH V Sbjct: 77 YLNFFVDKAAFTKDTLEKVLKEGENYGKSELGKGKNVVVEFSSPNIAKPFHVGHLFSTSV 136 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGV 204 G+ L +++ GY TR ++ D G Q L +S + R+ + +L+ + P + Sbjct: 137 GNALYKIISSQGYNCTRINHLGDWGTQFGKL-ISAYKRWCDEDSLHKD----PIKELLRI 191 Query: 205 YLKHVGKELADK----------YSSELLNFPEEK---WLPIVKDYSVQAMMKIIRDDLKA 251 Y+K E A+K Y +L + EE+ W KD S++ KI DL Sbjct: 192 YVKF--HEEAEKDPSLDEEGRMYFKKLEDGCEEEVALWKKF-KDLSLREFKKIY--DL-- 244 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 LN++ D + E F+ + D ID GIL Sbjct: 245 LNVEFDSYAGES-FYSDKMDAVVDEIDKT--------GILVDSNGA-------------- 281 Query: 312 RSTMVGDDVDRP---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVK 365 ++ DD + P + KSDG+ Y DL Y K Y+ FD IYV+G D S Y + Sbjct: 282 -KVVMLDDYNLPPCIVKKSDGATIYATRDLTAAIYRKKTYD--FDKCIYVVGLDQSLYFR 338 Query: 366 RLEAVAAAVSEKKAQINVLLC-ELVRLYRDGMPIKMSKRAGDFITLR------------- 411 ++ A + + V + LVR K+S R GD I L Sbjct: 339 QIFATLKLMGKDWVDSCVHVGFGLVRF----ADKKLSTRKGDVIFLEDLLNRAIERTLEI 394 Query: 412 ------------HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAY 458 V ++G +V F L + FD+ ++ + + P YVQY+Y Sbjct: 395 INEKNPELENKEEVAKKIGVGAVIFTYLKNNRERDIVFDWNEMLSFEGETGP--YVQYSY 452 Query: 459 ARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 AR +SI R+A I ++D+ E +LI L + + + +A E Sbjct: 453 ARGKSILRKAPAGISENVDYSKLSSK----------EEFELIKILHGFNKAVLSAINKLE 502 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 P+ + Y+ D A F+ ++ + A + + R+QLV A +I +GLN++ Sbjct: 503 PFIVTRYVIDAAKAFNKFYNAHS------IINAEDEGVKAARIQLVKASCQVIKNGLNLL 556 Query: 578 GVESPNEM 585 G++ +M Sbjct: 557 GIDVVEKM 564 >gi|238897849|ref|YP_002923528.1| arginine tRNA synthetase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259511649|sp|C4K487|SYR_HAMD5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|229465606|gb|ACQ67380.1| arginine tRNA synthetase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 576 Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 137/579 (23%), Positives = 247/579 (42%), Gaps = 75/579 (12%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ + P +AE ++ + + V IAG GFIN++L+ ++ + + Sbjct: 37 GDYQANGVMSAAKKQRIPPRELAERVLEHLDLSDIAKKVEIAGPGFINIFLNEQWISQKI 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 S+ + G + G + ++ I++ + N MHVGH R ++GD +A ++F G+ V Sbjct: 97 ESVFI-GPKLGLTPVTP-QRIVIDYSAPNVAKEMHVGHLRSTIIGDAMARTLSFLGHHVI 154 Query: 163 REYYINDAGAQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGVYLKH-----VGKELADK 216 R +I D G Q L A ++ AL SDL Y KH + + A Sbjct: 155 RANHIGDWGTQFGMLIAYLEKIQHDHALEMVLSDLEHFYREAK--KHYDEDEIFAQRARD 212 Query: 217 YSSELLN---FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273 Y +L + + E W +V Q + R LK D+ + E ++ P+ + Sbjct: 213 YVVKLQSGDPYCREMWRKLVDITMTQNHLSYER--LKVTLTPEDM-MGESLYNDMLPNIV 269 Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333 D+I +G+ K + + ++ Q +G+ + + K DG Y Y Sbjct: 270 EDLI---------AKGV--AVKDQGSVLVFLEEYQ-----NKIGEPMGVVIQKKDGGYLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGY------VKRLEA-VAAAVSEKKAQINVLL 385 D+A K + E D ++Y + S + + + RL V +VS + ++L Sbjct: 314 ATTDIACVKYRCETLKADRILYYIDSRQNQHLAQVWTITRLAGYVPESVSLEHHMFGMML 373 Query: 386 CELVRLY--RDGMPIKMS-------KRAGDFIT----------LRHVVDEVGSDSVRFMM 426 + + + R G +K+S +RAG I L +++ V +V++ Sbjct: 374 GKDGKPFKTRTGGTVKLSDLLDEAVERAGQLIRGKNPDLNETDLNNLIQAVAIGAVKYAD 433 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 L + + FD+ ++ + N Y+QYAY+R S+F+++ LD VI Sbjct: 434 LSKNRTTDYIFDWDRML-SFEGNTAPYIQYAYSRVTSLFKKS-----GLDEKKIMSPVII 487 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 QE + E L + L ++ +I P+ + YLYDLA+ F + H Sbjct: 488 QEEK----ERSLAILLLQFEEMISTVARDGTPHLMCSYLYDLATRFSIFYEH------CP 537 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N ++ RL+L A + GL +G+E+ M Sbjct: 538 ILNAKNEQIRQSRLKLAWLTAKTLKLGLKNLGIETVERM 576 >gi|309791778|ref|ZP_07686266.1| arginyl-tRNA synthetase [Oscillochloris trichoides DG6] gi|308226184|gb|EFO79924.1| arginyl-tRNA synthetase [Oscillochloris trichoides DG6] Length = 573 Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 126/568 (22%), Positives = 231/568 (40%), Gaps = 78/568 (13%) Query: 54 SRPLGLDPLTIAELIVARIKIDPD--VDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGI 110 ++ LGL P +A + A I + PD + +V AG F+N L P L + +L+ I G Sbjct: 48 AKALGLPPPQLANELAASITLAPDSLIGAVSAAGP-FLNFSLHPQRLAEAVLAEIAQQGA 106 Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170 YG + G G + +++ + N MHVGH R ++G +L ++ GY V + ++ D Sbjct: 107 AYGTHSDGTGQMIVVDYSAPNIAKRMHVGHIRSTIIGQSLVNIFRALGYTVVGDNHLGDW 166 Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-KYSSELLNFPEEKW 229 G Q + L+ Y + ++ L K+ D ++ + E+ Sbjct: 167 GKQFGVV-LAAIELYGRPAVEGEAALEALEAQYARYAAAAKDQPDLDEAARHWSLRLEQG 225 Query: 230 LPIVKD---YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286 P ++ + V M+ + + L + D E + P I + +D Sbjct: 226 DPQARELWQWCVDLTMRAAQRNYDRLGVHIDHAYGESFYEHMLPGVIAEALD-------- 277 Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY- 345 +G+ + D+++ L +SDG Y DLA + Sbjct: 278 -KGVAQREEGGAVVITDLEKLPTFL------------LQRSDGGTLYMTRDLATVLFRLD 324 Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRA 404 E +IYV+G + ++++L A+ A+ + +I+++ ++ G P +S R Sbjct: 325 EFSPTRIIYVIGEPQALHLRQLFALTRAMGHAR-EIDLVHVAFGTVFDASGQP--LSTRR 381 Query: 405 GDFITLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDF 437 G+ + L ++DE VG +V + L++ + Sbjct: 382 GNMVYLESLLDEAVARALAVVEQKSPDLPAEEKQAVAEAVGVGAVVYNDLYQDTKRNITL 441 Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497 D+ ++ ++ N Y+QY++ARC SI R+ DL + SE++ Sbjct: 442 DWDRML-ATEGNSATYLQYSHARCGSILRRGAADGHDLAHVALLTH---------PSEVR 491 Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557 LI HLA P + A P+ +A + Y A F G + ++A +L Sbjct: 492 LIKHLARLPDALREAGSRYAPFVIADWCYTTAREF------GVFFEQCPVLKAEQVELRS 545 Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585 RL LV A A + GL ++G+++P M Sbjct: 546 ARLALVAATARALKVGLGLLGIQAPERM 573 >gi|319946042|ref|ZP_08020291.1| arginine--tRNA ligase [Streptococcus australis ATCC 700641] gi|319747850|gb|EFW00095.1| arginine--tRNA ligase [Streptococcus australis ATCC 700641] Length = 562 Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 149/605 (24%), Positives = 249/605 (41%), Gaps = 120/605 (19%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E+P+ G ++ A L++ P IA I KID +A ++N + Sbjct: 26 LLEQPKSSDLGDIAF-PAFSLAKIERKAPQAIAADIAE--KIDASHFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + +++ +++ +G +YG+ G G + I+ S N P VGH R V+GD L+ Sbjct: 83 LDKSQISDQVIKAVIQAGADYGQQDEGHGGNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY + ++ D G Q L ++ W ++A+ N D Sbjct: 143 NIFRKMGYNTIKINHLGDWGKQFGLLMVAYKKWGSKEAVEANPID--------------- 187 Query: 211 KELADKY---SSELLNFP---EEK--WLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIF 259 EL Y ++E+ N P EE W ++D +A + + RD+ L N + + Sbjct: 188 -ELLKLYVRINAEIENDPALDEEGRLWFKKLEDGDPEATELWQWFRDESLVEFNRIYKLL 246 Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319 E D G+ + D +D A Q +G+L K + + D D Sbjct: 247 GVEFDSLNGE-AFYNDKMDE-AVQILEEKGLLKESKGASIVELD---------------D 289 Query: 320 VDRP---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373 V+ P + KSDG+ Y D+A Y Y F IY +G + S + ++L+AV Sbjct: 290 VNLPPAMIKKSDGATLYITRDIATAIYRARTY--NFVKNIYAVGQEQSNHFRQLKAVLKK 347 Query: 374 V----SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------- 416 + S+ ++ L R K+S R G+ I L + E Sbjct: 348 MGFDWSDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLQEAISRAKAQIEEKN 400 Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRS 463 VG +V+F L DFD V + + P YVQYAYAR +S Sbjct: 401 PELENKEEVAHAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YVQYAYARIQS 458 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+A F + S D ++I L ++ RV++ A +P +A Sbjct: 459 ILRKAN----------FTPSADATYSLSDPESWEIIKLLQDFARVVKRAAENYDPSLIAK 508 Query: 524 YLYDLASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 Y +LA F+ +++H R E+P RL L ++ A ++ L ++GVE Sbjct: 509 YAINLAQAFNKYYAHTRILDESPERD-----------SRLALSYSTAVVLKEALRLLGVE 557 Query: 581 SPNEM 585 +P +M Sbjct: 558 APEKM 562 >gi|297566840|ref|YP_003685812.1| arginyl-tRNA synthetase [Meiothermus silvanus DSM 9946] gi|296851289|gb|ADH64304.1| arginyl-tRNA synthetase [Meiothermus silvanus DSM 9946] Length = 612 Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 150/631 (23%), Positives = 272/631 (43%), Gaps = 116/631 (18%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 L IV++ G + A L+R L P IA I ++++ P V F G G+ Sbjct: 24 LPEIVLQETPPGKGGDYGSPVAFTLARTLRKAPPQIALEIAQKLELPPFVRRAFAVG-GY 82 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 +N L P++L V + R L + KV IE + NP +HVGH R +GD Sbjct: 83 LNFELDPAFL-------VQAATHPPRPLPPQPGKVLIEHTAVNPNKELHVGHLRNVCLGD 135 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 +A ++ ++G +V YI+D G Q A S+F L + S + + Y++ Sbjct: 136 AVARILRYAGRQVEVLNYIDDTGRQA---ADSLFALQHYGLVYDGSKKYDHWVGEAYVR- 191 Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM-KIIRDDLKA---LNIQHDIFISEDD 264 + ++L D+ L L ++ ++A + KI+R L+ L ++D+ + E D Sbjct: 192 LHRDLEDEAKKAQLEPQIALVLHRLEAGELRAEVDKILRAQLETMLRLGARYDLLVWESD 251 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323 R + + L R +V L P + K +D ++ + ++ P Sbjct: 252 IVR--EGLLHKALAILERSPHV----LRPSEGKYAGALVID-------ASAIIPGLEDPY 298 Query: 324 --LLKSDGSYTYFAADLAY--FKCKYERG--FD------------NMIYVMG-----SDH 360 L++S+G+ TY+A D+A+ +K +G FD ++Y +H Sbjct: 299 FVLVRSNGASTYYAKDIAFQMWKMGLLQGLKFDPYPGDYPAFTPGRLMYTSTPSGHLQEH 358 Query: 361 SGYVKRLEAVAAAVSEK----KAQINV------------LLCELVRLYRDGMPIKMSKRA 404 +G + + + A S +A + V L E V L +G +MS R Sbjct: 359 TGASETINVIDARQSHPQMIVRAGLEVAGRHDLAEGAYHLAYETVLL--EGK--QMSGRK 414 Query: 405 GDFITLRHVVDE-------------------------VGSDSVRFMMLWRKNSELLDFDF 439 G +++ V+DE +G +VRF M+ + + +DF + Sbjct: 415 GITVSVDEVLDEAVQRARAIIAEKNPLHPDPQTAAEQIGVGAVRFAMVKTEPKKQIDFRY 474 Query: 440 CKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS---E 495 + + P Y+QYA+AR SI R+A++ + V+ + ++ + E Sbjct: 475 DQALSFEGDTGP--YLQYAHARAGSILRKAEE-----------QGVLGEAPDYTQATPYE 521 Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-SHGRENPRLRFVQANNRK 554 + L L +P V++ A ++ P+ LA YL DL + ++G++ + E V + Sbjct: 522 VGLAKALLRFPAVVQEAAASKAPHVLAQYLLDLGAAWNGYYNAKTAEGKPATAVLSAPVG 581 Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L +RL+LV ++ +N GL ++G+ +P M Sbjct: 582 LRGVRLELVKSLKQTLNQGLTLLGLNAPEVM 612 >gi|256026756|ref|ZP_05440590.1| arginyl-tRNA synthetase [Fusobacterium sp. D11] gi|289764754|ref|ZP_06524132.1| arginyl-tRNA synthetase [Fusobacterium sp. D11] gi|289716309|gb|EFD80321.1| arginyl-tRNA synthetase [Fusobacterium sp. D11] Length = 569 Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 136/581 (23%), Positives = 250/581 (43%), Gaps = 88/581 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AMI S+ +G +P IAE I V+ + +AG GFIN++LS Y I Sbjct: 39 GDYQCNFAMINSKVIGDNPRKIAEKIKNNFPYGNVVEKLEVAGPGFINIFLSDKY---IS 95 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 SI G +Y + + + KV ++F S N MH+GH R ++G+++ + + GY+V Sbjct: 96 DSIKKIGEDYDFSFLNRKGKVIVDFSSPNIAKRMHIGHLRSTIIGESVCRIYRYLGYDVV 155 Query: 163 REYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVGK-----ELADK 216 + +I D G Q L + W ++A N + E VY+K + L D Sbjct: 156 ADNHIGDWGTQFGKLIVGYRKWLNREAYEKNAIEELE----RVYVKFSDEAEKDPSLEDL 211 Query: 217 YSSEL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274 +EL + EE+ + K++ ++ +K K L++ D + E ++ + Sbjct: 212 ARAELKKVQDGEEENTKLWKEFITES-LKEYNKLYKRLDVHFDTYYGESFYN----DMMA 266 Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334 D++ L +G + + + D K LF + K DG+Y Y Sbjct: 267 DVVKELIDKGLAVD-------DEGAKVVFFDEKDNLFPCI---------VQKKDGAYLYS 310 Query: 335 AADLAYFKC-KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393 +D+A K K + MIY+ + + K+ + + + ++ ++R + Sbjct: 311 TSDIATVKFRKNTYDVNKMIYLTDARQQDHFKQFFKITDMLDWNIEKYHIWFG-IIR-FA 368 Query: 394 DGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMM 426 DG+ +S R G+ I L ++DE VG SV++ Sbjct: 369 DGI---LSTRKGNVIKLEELLDEAHNRAYDVVNEKNPNLSEEEKQNIAEVVGVSSVKYAD 425 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 L + + F++ K+ + N Y+ Y YAR +SI R+ + DL+ ++ I Sbjct: 426 LSQNKQSDIIFEWDKML-SFEGNTAPYLLYTYARIQSILRKVAEQNIDLNENI----EIK 480 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 +++F+ S L +L +P + A +P +A YLY+L+ + +++ P L Sbjct: 481 TDNKFEKS---LATYLLAFPISVLKAAETFKPNLIADYLYELSKKLNSFYNNC---PIL- 533 Query: 547 FVQANNRKLTMM--RLQLVHAVASIINSGLNIIGVESPNEM 585 N+ + + R L+ ++ GL ++G+ N+M Sbjct: 534 -----NQDIETLKSRALLIKKTGKVLKDGLGLLGIPVLNKM 569 >gi|332365316|gb|EGJ43079.1| arginine--tRNA ligase [Streptococcus sanguinis SK1059] Length = 562 Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 144/600 (24%), Positives = 247/600 (41%), Gaps = 110/600 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E+P+ G ++ A L++ P IA I +I D V G ++N + Sbjct: 26 LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIAADIAEKIDT-AHFDKVVATGP-YVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 LS + + +++ I+ G +YG+ G G + I+ S N P VGH R V+GD L+ Sbjct: 83 LSKAEISGQVIKEIIKDGADYGQQNEGNGENITIDLSSPNIAKPFSVGHLRSTVIGDALS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY + ++ D G Q L ++ W Q+A+ N P +Y++ + Sbjct: 143 NIFRRIGYNTIKINHLGDWGKQFGLLMVAYKKWGSQEAVEAN----PIDELLKLYVR-IN 197 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 E+ + S L+ W ++D +A + + RD+ L N +++ E D Sbjct: 198 AEIENDPS---LDEEGRLWFKKLEDGDPEATELWQWFRDESLTEFNRIYELLGVEFDSLN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323 G+ + + I L +G + E SK D+ +D + P Sbjct: 255 GEAFYNDKMDEGIQILEEKGLLQE-------SKGASIVDL-------------EDFNLPP 294 Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374 + KSDG+ Y D+A Y Y F +YV+G + + + ++L+AV + Sbjct: 295 AMIKKSDGATLYITRDIATAIYRARTY--NFVKNVYVVGQEQANHFRQLKAVLKKMGFDW 352 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 S+ ++ L R K+S R G+ I L + E Sbjct: 353 SDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLLEAISRAKSQIEAKNPDLEN 405 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG +V+F L DFD V + + P Y+QYAYAR +SI R+A Sbjct: 406 KDAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQSILRKA 463 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 F + S D ++I L ++ RV++ A EP +A Y L Sbjct: 464 N----------FQPDAEATYSLNDPESWEIIKLLQDFGRVVKRAADNYEPSLIAKYAISL 513 Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A F+ +++H R E+P RL L ++ A ++ L ++GVE+P +M Sbjct: 514 AQAFNKYYAHTRILDESPERD-----------SRLALSYSTAVVLKEALRLLGVEAPEKM 562 >gi|317048536|ref|YP_004116184.1| arginyl-tRNA synthetase [Pantoea sp. At-9b] gi|316950153|gb|ADU69628.1| arginyl-tRNA synthetase [Pantoea sp. At-9b] Length = 576 Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 137/596 (22%), Positives = 235/596 (39%), Gaps = 109/596 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG P +AE ++ + + V IAG GFIN++L +L Sbjct: 37 GDYQANGIMAVAKKLGQAPRQLAEQVIQHLDLQGIASKVEIAGPGFINIFLDRQWLAD-Q 95 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 ++ ++ G + + T V I++ + N MHVGH R ++GD + F G+ V Sbjct: 96 AAQALTLPRLGVSSVAAQTIV-IDYSAPNVAKEMHVGHVRSTIIGDAAVRTLEFLGHHVI 154 Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204 R ++ D G Q L L F+R + Y+ D E G Sbjct: 155 RANHVGDWGTQFGMLIAYLEKQQSEHHEDIALADLEAFYREAKRTYDEDEAFAE-RARGY 213 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 +K G D+Y + W +V D ++ K+ D L + D+ + E Sbjct: 214 VVKLQG---GDEYCRTM-------WKKLV-DITMSQNQKVY-DRLNVTLTRKDV-MGESL 260 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 ++ P + D+ + +G+ + T D + + G+ + + Sbjct: 261 YNDMLPGIVADLKE---------KGLAVISEGATVVFLDEFKNK-------EGEPMGVIV 304 Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSE 376 K DG Y Y D+A K +YE D ++Y + S + V++ V +V Sbjct: 305 QKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLQQAWTIVRKAGYVPESVPL 364 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416 + ++L +DG P K R+G I L ++DE Sbjct: 365 EHHAFGMMLG------KDGRPFKT--RSGGTIKLADLLDEAVERALALVSEKNPEMSSDE 416 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 VG +V++ L + + FD+ + + N Y+QYAY R S+FR+A Sbjct: 417 LQALAEVVGIGAVKYADLSKSRTTDYIFDWDNMLA-FEGNTAPYMQYAYTRVLSVFRKAG 475 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 L ++ V+ +E E QL L ++ VI P+ + YLYDLA Sbjct: 476 IAADSLQGEI----VLSEERE-----AQLATRLLQFEDVITQVARDGTPHVMCAYLYDLA 526 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +F G + H + A ++ RLQL A + GL+ +G+++ M Sbjct: 527 GLFSGFYEH------CPILTAEEEQVRNSRLQLAALTAKTLKQGLDTLGIKTVERM 576 >gi|260585076|ref|ZP_05852818.1| arginine--tRNA ligase [Granulicatella elegans ATCC 700633] gi|260157272|gb|EEW92346.1| arginine--tRNA ligase [Granulicatella elegans ATCC 700633] Length = 563 Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 148/592 (25%), Positives = 250/592 (42%), Gaps = 94/592 (15%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IE P+ G L+ A L++ L P IA+ IV + D + G + N + Sbjct: 27 MIEVPKYAEQGDLAF-PAFSLAKVLRKAPQAIAQEIVEAVS-DEHISQAVAMGP-YANFF 83 Query: 93 LSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 LS + + L +++ YG G+G ++ S N PM +GH R V+G+ +A Sbjct: 84 LSKGKFADETLHTVLEQRENYGNFDFGQGRNAIVDMSSPNIAKPMSMGHLRSTVIGNAIA 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +L GY + ++ D G Q L ++ W ++A+ + P +Y+K Sbjct: 144 NLEKKVGYNPIKINHLGDWGTQFGKLIVAYKKWGTKEAVEQD----PIAELLRLYVKF-- 197 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA---MMKIIRDDLKALNIQHDIFISEDDFHR 267 + A++ SS L W ++D +A + LK N +D+ D + Sbjct: 198 HDEAERDSS--LEDEGRAWFKKLEDGDAEAEELWNWFKSESLKEFNRIYDVLGITFDSYN 255 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-DDVDRP 323 G+ + I++ L G +DR +T+V D D P Sbjct: 256 GEAFYNDKMDPIVEYLESNGI----------------TTIDRG-----ATVVHLDKYDLP 294 Query: 324 ---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------- 370 + KSDG+ Y DLA Y K Y+ F IYV+G++ + + ++L+AV Sbjct: 295 PALIKKSDGATLYITRDLAAAHYRKETYD--FAKNIYVVGNEQANHFRQLKAVLNEMGRD 352 Query: 371 ----------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414 +S +K +I VLL E++R + ++ + + V Sbjct: 353 WQENMIHVGFGLITLGGKKLSTRKGKI-VLLEEVLREAEELALKQIEAKNPNLPNKEQVA 411 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFP 473 +VG +V F L + DF+ +V + + + P YVQY AR SI R+A + Sbjct: 412 KQVGVGAVIFHDLKNDRTNNFDFNLEEVVQFEGETGP--YVQYTRARAMSILRKA-GVSV 468 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 DL L S D +++ + YP +++ A EP ++ Y+ LA F+ Sbjct: 469 DLSQPL---------SLEDDYAWEVLKQIENYPNIVKYAESKFEPSVISKYVISLAQAFN 519 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++++ R + + L RL LV A A I+ GL I+GVESP+EM Sbjct: 520 KYYANSR-------ILQEDEGLNA-RLALVEATAVILKQGLAILGVESPDEM 563 >gi|297201498|ref|ZP_06918895.1| arginyl-tRNA synthetase [Streptomyces sviceus ATCC 29083] gi|197716790|gb|EDY60824.1| arginyl-tRNA synthetase [Streptomyces sviceus ATCC 29083] Length = 584 Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 135/605 (22%), Positives = 239/605 (39%), Gaps = 110/605 (18%) Query: 38 RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 R N + L++ +P +A +V+RI + V ++G GF+N+ L+ Sbjct: 33 RRSDRADFQANGILALAKKAKANPRDLATQVVSRITTGDVIKDVEVSGPGFLNITLTDKA 92 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + L++ G G L + I++ N MHVGH R AV+GD L ++ F+ Sbjct: 93 ITENLAARYEDGDRLGVPLKDEPGTTVIDYAQPNVAKEMHVGHLRSAVIGDALRGMLDFT 152 Query: 158 GYEVTREYYINDAGAQINTL------------------------ALSVFWRYQQALYNND 193 G + ++I D G Q L L+ ++ + ++++D Sbjct: 153 GEKTIGRHHIGDWGTQFGMLIQYLIENPGELAPPDEVDGEQAMSNLNRVYKASRVVFDSD 212 Query: 194 SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN 253 + E V V + DK + EL W V + V + D++ Sbjct: 213 EEFKERARKRV----VALQSGDKETLEL-------WQQFVDESKVYFYSVFEKLDME--- 258 Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313 I+ D + E ++ G P R +++ + EG L + F Sbjct: 259 IRDDEIVGESAYNEGMPETAR-LLEEMG-VAVRSEGALV----------------VFFDE 300 Query: 314 TMVGDDVDRPLL--KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRL-EA 369 DD PL+ K+DG + Y A+DL + + + ++YV+ S + K + EA Sbjct: 301 IRGKDDQPVPLIVQKADGGFGYAASDLTAIRNRVTDLHATTLLYVVDVRQSLHFKMVFEA 360 Query: 370 V--AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------- 416 A +S+ N+ + L DG P K R G+ + L ++DE Sbjct: 361 ARRAGWLSDGVTAHNMGYGTV--LGADGKPFKT--REGETVKLEDLLDEAVQRAAEVVRE 416 Query: 417 ----------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460 VG +V++ L + FD ++ + + V Y+QYAYAR Sbjct: 417 KAQDLTEDEIQERAAQVGIGAVKYADLSTSPNRDYKFDLDQMVSLNGDTSV-YLQYAYAR 475 Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520 +SI R+A ++ P E E +E L +HL + + A P+K Sbjct: 476 IQSILRKAGEVRP----------AARPELELADAERALGLHLDAFGSTVFEAAAEYAPHK 525 Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 LA YLY LAS++ + + ++A+ RL L A ++ G+ ++G+ Sbjct: 526 LAAYLYQLASLYTSFYD------KCPVLKADTPAQVENRLFLCDLTARTLHQGMALLGIR 579 Query: 581 SPNEM 585 +P + Sbjct: 580 TPERL 584 >gi|187932062|ref|YP_001892047.1| arginyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica FSC147] gi|238691512|sp|B2SDQ4|SYR_FRATM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|187712971|gb|ACD31268.1| arginyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica FSC147] Length = 581 Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 147/630 (23%), Positives = 262/630 (41%), Gaps = 106/630 (16%) Query: 11 LKNYLKEIDCKIKVEKKILD---RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 ++NYL E K+ + ++ ++V D GH N AM L++ PL IAE Sbjct: 3 IENYLSETLAKVFQKLGYVESFAKVVTSTREDV--GHFQCNGAMPLAKFAKKPPLAIAEE 60 Query: 68 IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127 IV I + + +A GFIN+ L+P +L + + S ++G KV ++F Sbjct: 61 IVEHIDAEDIFAKLEVAKPGFINITLAPKFLADTTNRFLNSN-KFGVQNNLPNRKVVLDF 119 Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187 N PMHVGH R A++GD L + F G V + ++ D G Q+ L + + Q Sbjct: 120 GGPNVAKPMHVGHIRSALLGDALQRIHRFCGDTVVSDVHLGDWGTQMGMLIEEIKLQSPQ 179 Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKY------SSELLNFPEEKWLPIVK------- 234 +Y +++ G YP V +ELA+ Y +N E+ L + Sbjct: 180 LVYFDEN--YTGEYPTESPVTV-QELAEIYPRASKRCKSDINEMEKARLATFELQQGRRG 236 Query: 235 -----DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 + V+ + ++ D +L++ D+++ E D ++ I ++I ++YE Sbjct: 237 YVALWQHFVRISIDAVKKDFDSLDVHFDLWLGESDANKF----IDEMISYFQANNFIYE- 291 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL--LKSDGSYTYFAADLA-YFKCKYE 346 + D ++ D PL +K DG Y DLA ++ + Sbjct: 292 ------DEGAWVIDTNK------------DGVPPLIVIKKDGGVMYGTTDLATLWQRSKD 333 Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVA---AAVSEKKAQINVLLCELVRLY------RDGMP 397 D +IYV+ S + K++ +VA VSEK C+L + +DG P Sbjct: 334 LDPDEIIYVVDKRQSLHFKQVFSVAERTKVVSEK--------CKLKHVAFGTVNGKDGRP 385 Query: 398 IKMSK-----------RAGDFITLR-------HVVDEVGSDSVRFMMLWRKNSELLDFDF 439 K + +A ++ R ++D++ +++F L + FD Sbjct: 386 FKTREGGVMHLADLISQAKEYAKNRMPDENDDSIIDQIAMATIKFGDLINNYANDYFFDL 445 Query: 440 CK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRN--VIPQESEFDTSE 495 K + + K P Y+ Y R +SI R+ IF D D ++ V+ +E+ E Sbjct: 446 EKFAQHEGKTGP--YLLYTVVRAKSILRK---IFGDNYDIKSLAKDYKVVNAHNEY---E 497 Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555 +L + L ++P ++ A +P+ + Y Y LA+ F+ + + N ++ L Sbjct: 498 EKLQLQLIQFPIAVQRAYENSQPHHICEYAYSLANSFNKFYVNCPIN------NLDDESL 551 Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R+ L A + ++IG+ P M Sbjct: 552 KKARIALCMATVKAMTIASDLIGISIPERM 581 >gi|50553350|ref|XP_504086.1| YALI0E17985p [Yarrowia lipolytica] gi|49649955|emb|CAG79679.1| YALI0E17985p [Yarrowia lipolytica] Length = 647 Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 132/548 (24%), Positives = 226/548 (41%), Gaps = 94/548 (17%) Query: 88 FINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 F+ + SP L I + I+ +EYG + +GKG KV IEF S N P H GH R ++ Sbjct: 144 FMQFFFSPKLLYNIVIKDILERKLEYGSSDVGKGKKVVIEFSSPNIAKPFHAGHLRSTII 203 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY---QQALYNNDSDLPEGYYPG 203 G L++L G+EV R Y+ D G Q LA+ F RY +Q + + L E Y Sbjct: 204 GGFLSNLHEKLGWEVIRLNYLGDWGKQFGVLAVG-FERYGSEEQLVTDPIQHLFEVYVRI 262 Query: 204 VYLKHVGKELADKYSSELLNFPEEK---WLPIVKDYSVQAM----------MKIIRDDLK 250 KE + + + E + ++K + ++D +A+ ++ +D Sbjct: 263 NKDMEAEKEASKEATGEESSATDDKAREYFRKMEDGDKEALALWSRFRDLSIERYKDTYA 322 Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310 LNI +D + E S + + +A+ +V +G++ DR L Sbjct: 323 RLNIHYDSYSGE--------SQVPEEFMKMAKDLFVEKGLVHE-----------DRGAKL 363 Query: 311 FRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS------- 361 T + + ++ K DG+ Y D+ + E+ FD MIYV+ S Sbjct: 364 IDLTKFNKKLGKVIVEKKDGTSLYITRDVGGAIARMEKYKFDKMIYVIASQQDLHCQQFF 423 Query: 362 --------GYVKRLEAV----AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 +V RL+ V +S +K + V L ++ ++ M M K + Sbjct: 424 RILKECGFDWVDRLQHVNFGLVQGMSTRKGTV-VFLSNILEEVKESMHNVMKKNEVKYNQ 482 Query: 410 LRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIF 465 + + + D VG SV + K FD+ ++ + P Y+QYA++R RS+ Sbjct: 483 VENPEEIADLVGISSVMIQDMSAKRVNNYKFDWDRMLSFEGDTGP--YLQYAHSRLRSVE 540 Query: 466 RQA----KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 R++ + DF L + +LI L ++P V+ NA QEP + Sbjct: 541 RKSGMTIDENLASADFSLLTEPIAD----------ELIRTLTQFPDVVLNAGKTQEPATI 590 Query: 522 AFYLYDL----ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 YL+ L +S + W G+E L RL L + ++ +G+ ++ Sbjct: 591 VTYLFKLTHQVSSCYDVLWVAGQEEA-----------LAKARLSLYSSARQVLYNGMVLL 639 Query: 578 GVESPNEM 585 G+ + M Sbjct: 640 GLTPVDRM 647 >gi|297563083|ref|YP_003682057.1| arginyl-tRNA synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847531|gb|ADH69551.1| arginyl-tRNA synthetase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 581 Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 134/594 (22%), Positives = 240/594 (40%), Gaps = 108/594 (18%) Query: 47 TNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL----RKIL 102 NAA+ L++ LG P ++ I+ + + V ++G GFINL L ++ R++L Sbjct: 41 ANAALALAKRLGRKPREVSAAIMEHLDVADVCRDVEVSGPGFINLTLREDWIAGQTRRLL 100 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + E R + +++ + N MHVGH R VVGD LA + F G+ V Sbjct: 101 DDPRLGVPEQERQ------NIPLDYSAPNVAKEMHVGHLRTTVVGDALARTLEFLGHNVI 154 Query: 163 REYYINDAG-------------------AQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203 R+ +I D G A + T + F++ + +++ P+ + Sbjct: 155 RQNHIGDWGTPFGMLIEHLLEVGEDSPEADLVTTDPNAFYQAARTKFDSSGPGPDDFAAR 214 Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 + V + D+ + L K + + K Y + K+ + + + E Sbjct: 215 ARRRVVSLQSGDEETLRLWR----KLVGLSKVYFNKVYAKL------GVTLTDEDLAGES 264 Query: 264 DFHRGDPSPIRDIIDNLARQGY--VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-DDV 320 ++ + + D+ + L +G + +G L C +F G +D Sbjct: 265 SYN----AALADVCEELEAKGIAEISDGAL----------C-------VFLEGFTGREDK 303 Query: 321 DRPLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA------ 371 PL+ KSDG Y Y DLA + + + D ++YV+G+ + + K + A A Sbjct: 304 PVPLIVRKSDGGYGYATTDLATVRHRVDDLKADRILYVVGAPQAMHFKMVWATAREAGWL 363 Query: 372 -AAVSEKKAQINVLLCELVRLYR--DGMPIKMS-------KRAGDFITLR---------- 411 V QI +L ++ R G P+++ +RA + Sbjct: 364 PEGVETVHVQIGNVLGSDGKILRTRSGAPVRLMALLDEAIERAAAVVAQNRPDLDAEGQA 423 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 + +VG +V++ L + FDF ++ + N Y+QYA AR RSIFR+ Sbjct: 424 EIARQVGIGAVKYADLSVAHDTEYTFDFDRMLALTG-NTGPYLQYAQARIRSIFRKGGLE 482 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 D+ S + +E L + L E+ V+ +P++L+ YL++LA Sbjct: 483 LSQARGDI---------SVSEGAERDLALKLLEFGAVVAQVGDLLQPHRLSTYLFELAQS 533 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + H + A N RL LV ++ GL+++GVE+P M Sbjct: 534 LTAFYEH------CPVLTAPNEAERESRLALVAVAFRVLVQGLDLLGVEAPEHM 581 >gi|259048230|ref|ZP_05738631.1| arginine--tRNA ligase [Granulicatella adiacens ATCC 49175] gi|259035291|gb|EEW36546.1| arginine--tRNA ligase [Granulicatella adiacens ATCC 49175] Length = 563 Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 157/603 (26%), Positives = 249/603 (41%), Gaps = 106/603 (17%) Query: 29 LDRIV--IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK 86 +D IV IE P+ G L+ A L++ L P IA IV + D + G Sbjct: 21 VDEIVSMIEVPKYANQGDLAF-PAFTLAKVLRKAPQAIATEIVEAVS-DKHIARAEAMGP 78 Query: 87 GFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 + N +L S + ++L ++ G YG G+G KV I+ S N PM +GH R V Sbjct: 79 -YANFFLERSAFADEVLKEVLELGEHYGDWDYGQGRKVVIDMSSPNIAKPMSMGHLRSTV 137 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205 +G+ +A+L GYE R ++ D G Q L + + L D P +Y Sbjct: 138 IGNAIANLEKKVGYEPIRINHLGDWGTQFGKLIEAYKLWGSEELVKAD---PIAELIKLY 194 Query: 206 LK-HVGKELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFIS 261 ++ H EL L+ W ++D +A + + R + LK N +D+ Sbjct: 195 VRFHEEAEL-----DPTLDDKGRAWFKKLEDGDAEAVRLWEWFRSESLKEFNRVYDLLGV 249 Query: 262 EDDFHRGDP--SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319 D + G+ + D++ ++ +L T D+++ L Sbjct: 250 TFDSYNGEAFYNDKMDVVVDMLEDA----NLLKVDNGATI--VDLEKYDL---------- 293 Query: 320 VDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374 P L KSDG+ Y DLA Y K Y+ F IYV+G + S + K+L+AV Sbjct: 294 --PPALIKKSDGATLYMTRDLAAANYRKNTYD--FAKCIYVVGMEQSNHFKQLKAVLK-- 347 Query: 375 SEKKAQINVLLCELVRLYRDGMPI----KMSKRAGDFITLRHVVDE-------------- 416 ++N+ E + G+ K+S R G I L V+ E Sbjct: 348 -----ELNLPWAETIVHIPFGLITLNGKKLSTRKGKIILLEGVLKEATELALKQIEAKNP 402 Query: 417 -----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCR 462 VG +V F L KN +FDF V+ + + P YVQY +AR Sbjct: 403 SLENKEAVAHAVGVGAVIFHDL--KNDRTNNFDFALEEVVQFEGETGP--YVQYTHARAM 458 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 SI R+A ++ S D +++ + YP V+ A EP +A Sbjct: 459 SILRKANHTV----------DMTEAFSLTDDDAWEVLKLIENYPNVVRFAEEKCEPSAIA 508 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 Y+ +LA F+ +++H + L +A N R+ LV AS++ GL ++GV +P Sbjct: 509 KYVINLAQAFNKYYAHTK---VLVEDEAFNS-----RIALVQTTASLLKQGLALLGVAAP 560 Query: 583 NEM 585 +EM Sbjct: 561 DEM 563 >gi|15618481|ref|NP_224766.1| arginyl-tRNA synthetase [Chlamydophila pneumoniae CWL029] gi|15836101|ref|NP_300625.1| arginyl-tRNA synthetase [Chlamydophila pneumoniae J138] gi|16752468|ref|NP_444730.1| arginyl-tRNA synthetase [Chlamydophila pneumoniae AR39] gi|33241923|ref|NP_876864.1| arginyl-tRNA synthetase [Chlamydophila pneumoniae TW-183] gi|7674357|sp|Q9Z7Y3|SYR_CHLPN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|4376863|gb|AAD18710.1| Arginyl tRNA Transferase [Chlamydophila pneumoniae CWL029] gi|7189110|gb|AAF38053.1| arginyl-tRNA synthetase [Chlamydophila pneumoniae AR39] gi|8978941|dbj|BAA98776.1| arginyl tRNA transferase [Chlamydophila pneumoniae J138] gi|33236433|gb|AAP98521.1| arginyl-tRNA synthetase [Chlamydophila pneumoniae TW-183] Length = 561 Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 148/584 (25%), Positives = 238/584 (40%), Gaps = 110/584 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH N AM L+R L P IAE IVA + +P + IAG GFIN SP +L + L Sbjct: 39 GHYQCNDAMKLARVLKKAPRAIAEAIVAELPQEP-FSLIEIAGAGFINFTFSPVFLNQQL 97 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 ++ G + + K+ I+F S N MHVGH R ++GD+LA + ++ G++V Sbjct: 98 EHFK-DALKLGFQ-VSQPKKIIIDFSSPNIAKDMHVGHLRSTIIGDSLARIFSYVGHDVL 155 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222 R +I D G A + Y Q + SDL ++L Y + Sbjct: 156 RLNHIGDWGT-----AFGMLITYLQENPCDYSDL--------------EDLTSLYKKAYV 196 Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDIIDNLA 281 F ++ K S Q ++ + D +A+ I I SE F + I DI+D + Sbjct: 197 CFTNDEEF---KKRSQQNVVALQAKDPQAIAIWEKICETSEKAFQK-----IYDILDIVV 248 Query: 282 --RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRPLL--KSDGSYTY 333 R Y LP D+++K LL S + + P + KSDG Y Y Sbjct: 249 EKRGESFYNPFLPEIIE------DLEKKGLLTVSNDAKCVFHEAFSIPFMVQKSDGGYNY 302 Query: 334 FAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 DLA + + E D +I V S + + LEA A A Q + L Sbjct: 303 ATTDLAAMRYRIEEDHADKIIIVTDLGQSLHFQLLEATAIAAG--YLQPGIFSHVGFGLV 360 Query: 393 RDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFM 425 D K+ R+G+ + LR ++D +G +++++ Sbjct: 361 LDPQGKKLKTRSGENVKLRELLDTAIEKAEEALREHRPELTDEAIQERAPVIGINAIKYS 420 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 L + F F K+ + + N ++ YAY R + I R R I Sbjct: 421 DLSSHRTSDYVFSFEKML-RFEGNTAMFLLYAYVRIQGIKR---------------RLGI 464 Query: 486 PQESEFDTSELQ------LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW--S 537 Q S E+Q L + L +P +E+ P+ L YLY+L F+G + S Sbjct: 465 SQLSLEGPPEIQEPAEELLALTLLRFPEALESTIKELCPHFLTDYLYNLTHKFNGFFRDS 524 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 H +++P + RL L ++ +G++++G+++ Sbjct: 525 HIQDSPYAK-----------SRLFLCALAEQVLATGMHLLGLKT 557 >gi|84393465|ref|ZP_00992221.1| arginyl-tRNA synthetase [Vibrio splendidus 12B01] gi|84375893|gb|EAP92784.1| arginyl-tRNA synthetase [Vibrio splendidus 12B01] Length = 577 Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 135/610 (22%), Positives = 239/610 (39%), Gaps = 136/610 (22%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG +P A+ ++ + +D V IAG GF+N++L ++L + Sbjct: 37 GDYQANGVMGVAKRLGTNPREFAQKVLDVLNLDGIASKVEIAGPGFLNIFLDEAFLAQQA 96 Query: 103 ------SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 S + V+ E + ++ + N MHVGH R ++GD + + F Sbjct: 97 DAALADSRLGVTAAE--------AQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEF 148 Query: 157 SGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDL- 196 G++V R +I D G Q L L F+R + LY+ D + Sbjct: 149 LGHKVIRANHIGDWGTQFGMLIANLERIQAETGEVSMELSDLEQFYRESKKLYDEDEEFA 208 Query: 197 --PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254 GY V + D+Y +E+ W +V VQ R + +++ Sbjct: 209 VKARGYV-------VKLQSGDEYCAEM-------WKKLVDVTMVQNQRNYDRLN---VSL 251 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR-- 312 D + E ++ + +I+ +L QG E D Q++F Sbjct: 252 TRDDVMGESMYNH----MLSNIVSDLQTQGLAKES---------------DGAQVVFLDE 292 Query: 313 -STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY------- 363 GD + + K DG + Y D+A K ++E G D ++Y + S + Sbjct: 293 YKNKDGDPMGVIVQKRDGGFLYTTTDIACAKYRFEELGADRVLYFIDSRQHQHLMQAWTI 352 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 V++ V +VS + ++L +DG P K RAG + L ++DE + + Sbjct: 353 VRKAGYVPESVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRATQ 404 Query: 424 FMMLWRKNSELLD--------------FDFCKVKEQSKENPVF--------------YVQ 455 ++ KN EL + + + + + VF Y+Q Sbjct: 405 --LIESKNPELAEDEKKTIANTVAMAAVKYADLSKHRTTDYVFDWENMLAFEGNTAPYMQ 462 Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515 YAY R SIF +A L+ D+ I +E E LI L ++ +++ Sbjct: 463 YAYTRVASIFAKAGISMDSLEGDI----KITEE-----KEKALIAKLLQFEEAVQSVARE 513 Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575 +P+ + YL++LA F + + A + + RL+L A I GL+ Sbjct: 514 GQPHIMCSYLFELAGQFSSFYE------ACPILVAEDETVKQSRLKLAALTAKTIKQGLS 567 Query: 576 IIGVESPNEM 585 ++G+E+ M Sbjct: 568 LLGIETLERM 577 >gi|256844871|ref|ZP_05550329.1| arginyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2] gi|256718430|gb|EEU31985.1| arginyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2] Length = 569 Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 139/586 (23%), Positives = 252/586 (43%), Gaps = 98/586 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AMI S+ +G +P IAE I V+ + +AG GFIN++LS Y I Sbjct: 39 GDYQCNFAMINSKIIGDNPRKIAEEIKNNFPCGDVVEKLEVAGPGFINIFLSDKY---IS 95 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 +SI G Y + + + KV I+F S N MH+GH R ++G+ + + F GY+V Sbjct: 96 NSIKKIGENYDFSFLNRKGKVIIDFSSPNIAKRMHIGHLRSTIIGEAVCRIYKFLGYDVV 155 Query: 163 REYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVGK-----ELADK 216 + +I D G Q L + W ++A N + E VY+K + L D Sbjct: 156 ADNHIGDWGTQFGKLIVGYRKWLNREAYEKNAIEELE----RVYVKFSDEAEKDPSLEDL 211 Query: 217 YSSEL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274 +EL + EE+ + K++ ++ +K K L++ D + E ++ ++ Sbjct: 212 ARAELKKVQDGEEENTKLWKEFITES-LKEYNKLYKRLDVHFDTYYGESFYNDMMADVVK 270 Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR--PLL--KSDGS 330 +++D D D +++F D+ D P + K DG+ Sbjct: 271 ELVD-------------------KKLAVDDDGAKVVFF-----DEKDNLFPCIVQKKDGA 306 Query: 331 YTYFAADLAYFKC-KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 Y Y +D+A K K + MIY+ + + K+ + + + ++ ++ Sbjct: 307 YLYSTSDIATVKFRKNTYDVNRMIYLTDARQQDHFKQFFKITDMLGWNIEKYHIWFG-II 365 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422 R + DG+ +S R G+ I L ++DE VG SV Sbjct: 366 R-FADGI---LSTRKGNVIKLEELLDEAHSRAYDVVNEKNPNLSEEEKQNIAEVVGVSSV 421 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 ++ L + + F++ K+ + N Y+ Y YAR +SI R+ + DL+ + Sbjct: 422 KYADLSQNKQSDIIFEWDKML-SFEGNTAPYLLYTYARIQSILRKVTEQNIDLN-----K 475 Query: 483 NV-IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 N+ I +++F+ S L +L +P + A +P +A YLY+L+ + +++ Sbjct: 476 NIEIKTDNKFEKS---LATYLLVFPISVLKAAETFKPNLIADYLYELSKKLNSFYNNC-- 530 Query: 542 NPRLRFVQANNRKLTMM--RLQLVHAVASIINSGLNIIGVESPNEM 585 P L N+ + + R L+ ++ GL ++G+ N+M Sbjct: 531 -PIL------NQDIETLKSRALLIKKTGEVLKEGLGLLGIPVLNKM 569 >gi|282897066|ref|ZP_06305068.1| Arginyl-tRNA synthetase, class Ic [Raphidiopsis brookii D9] gi|281197718|gb|EFA72612.1| Arginyl-tRNA synthetase, class Ic [Raphidiopsis brookii D9] Length = 585 Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 136/532 (25%), Positives = 217/532 (40%), Gaps = 66/532 (12%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N A+ LS+ LG+DP +IA IV + + + IAG GFINL L SYL L Sbjct: 40 GDFQANVALSLSKKLGMDPRSIAAAIVEELDVSDLCEVPEIAGPGFINLKLQISYLESQL 99 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 ++I G + + K ++F S N MHVGH R ++GD +A ++ F G++V Sbjct: 100 NAIKTDP-RLGVPRVDQPQKQIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFRGHQVL 158 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222 R ++ D G Q L + Y QAL + L G Y + + AD E+ Sbjct: 159 RLNHVGDWGTQFGMLIAYLREVYPQALTTANV-LNIGDLVSFYRQAKQRFDADPTFQEIA 217 Query: 223 NFPEEKWLPIVKD--YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP--SP-IRDII 277 + +D ++ + R + + + DI I E RG+ +P + I+ Sbjct: 218 RQEVVRLQAGAEDTTHAWNLLCAQSRKEFQTIYDLLDIKIVE----RGESFYNPFLSKIV 273 Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337 ++L + G V E KC L + G+ + + KSDG Y Y D Sbjct: 274 EDLEKAGLVEEN--------QGAKCVF----LEGFTNREGEALPLIVQKSDGGYNYATTD 321 Query: 338 LAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDG 395 LA + E +IYV + + + + VA + ++ + L DG Sbjct: 322 LAALLYRIREDHAKRIIYVTDAGQANHFAQFFQVAQKAGWIPDDVELVHIPFGLVLGEDG 381 Query: 396 MPIKMSKRAGDFITLRHVVDE-------------------------------VGSDSVRF 424 K R+GD + L+ ++DE VG +V++ Sbjct: 382 K--KFKTRSGDTVRLKDLLDEAVFRARTDLEARLQQEGRQETPEFIHNVAQTVGISAVKY 439 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 L + + F + K+ K N Y+ YAY R + I R+ K F +L D + Sbjct: 440 ADLSQNRTSSYVFSYDKMLS-LKGNTAPYMLYAYVRTQGISREGKIDFENLAPDA---KI 495 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 I QE +EL L HL + ++ P +L YLY L+ F+ + Sbjct: 496 ILQEE----TELALAKHLLQLDDILYQVEQDLLPNRLCEYLYSLSEKFNKFY 543 >gi|134302456|ref|YP_001122426.1| arginyl-tRNA synthetase [Francisella tularensis subsp. tularensis WY96-3418] gi|166232789|sp|A4IZF4|SYR_FRATW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|134050233|gb|ABO47304.1| arginyl-tRNA synthetase [Francisella tularensis subsp. tularensis WY96-3418] Length = 581 Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 147/630 (23%), Positives = 261/630 (41%), Gaps = 106/630 (16%) Query: 11 LKNYLKEIDCKIKVE---KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 ++NYL E K+ + + ++V D GH N AM L++ PL IAE Sbjct: 3 IENYLSETLAKVFQKLGYAESFAKVVTSTREDV--GHFQCNGAMPLAKFAKKPPLAIAEE 60 Query: 68 IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127 IV I + + +A GFIN+ L+P +L + + S ++G KV ++F Sbjct: 61 IVEHIDAEDIFAKLEVAKPGFINITLAPKFLADTTNRFLNSN-KFGVQNNLPNRKVVLDF 119 Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187 N PMHVGH R A++GD L + F G V + ++ D G Q+ L + + Q Sbjct: 120 GGPNVAKPMHVGHIRSALLGDALQRIHRFCGDTVVSDVHLGDWGTQMGMLIEEIKLQSPQ 179 Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKY------SSELLNFPEEKWLPIVK------- 234 +Y +++ G YP V +ELA+ Y +N E+ L + Sbjct: 180 LVYFDEN--YTGEYPTESPVTV-QELAEIYPRASKRCKSDINEMEKARLATFELQQGRRG 236 Query: 235 -----DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 + V+ + ++ D +L++ D+++ E D ++ I ++I ++YE Sbjct: 237 YVALWQHFVRISIDAVKKDFDSLDVHFDLWLGESDANKF----IDEMISYFQANNFIYE- 291 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL--LKSDGSYTYFAADLA-YFKCKYE 346 + D ++ D PL +K DG Y DLA ++ + Sbjct: 292 ------DEGAWVIDTNK------------DGVPPLIVIKKDGGVMYGTTDLATLWQRSKD 333 Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVA---AAVSEKKAQINVLLCELVRLY------RDGMP 397 D +IYV+ S + K++ +VA VSEK C+L + +DG P Sbjct: 334 LDPDEIIYVVDKRQSLHFKQVFSVAERTKVVSEK--------CKLKHVAFGTVNGKDGRP 385 Query: 398 IKMSK-----------RAGDFITLR-------HVVDEVGSDSVRFMMLWRKNSELLDFDF 439 K + +A ++ R ++D++ +++F L + FD Sbjct: 386 FKTREGGVMHLADLISQAKEYAKNRMPDENDDSIIDQIAMATIKFGDLINNYANDYFFDL 445 Query: 440 CK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRN--VIPQESEFDTSE 495 K + + K P Y+ Y R +SI R+ IF D D ++ V+ +E+ E Sbjct: 446 EKFAQHEGKTGP--YLLYTVVRAKSILRK---IFGDNYDIKSLAKDYKVVNAHNEY---E 497 Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555 +L + L ++P ++ A +P+ + Y Y LA+ F+ + + N ++ L Sbjct: 498 EKLQLQLIQFPIAVQRAYENSQPHHICEYAYSLANSFNKFYVNCPIN------NLDDESL 551 Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R+ L A + ++IG+ P M Sbjct: 552 KKARIALCMATVKAMTIASDLIGISIPERM 581 >gi|45361659|ref|NP_989403.1| arginyl-tRNA synthetase, cytoplasmic [Xenopus (Silurana) tropicalis] gi|82186176|sp|Q6P1S4|SYRC_XENTR RecName: Full=Arginyl-tRNA synthetase, cytoplasmic; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|40787810|gb|AAH64888.1| arginyl-tRNA synthetase [Xenopus (Silurana) tropicalis] Length = 660 Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 144/593 (24%), Positives = 248/593 (41%), Gaps = 93/593 (15%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +++ L + P IA+ IV I + V+ V IAG GFIN++L + Sbjct: 111 GDYQCNSAMAITQMLKAMNQKVSPREIADKIVKNIPTNELVEKVDIAGPGFINVHLHKDF 170 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 K +S ++V+G++ +I + KV ++F S N MHVGH R V+GD++ L F Sbjct: 171 TSKQISKLLVNGVQ--PPVIWERKKVVVDFSSPNIAKEMHVGHLRSTVIGDSICRLFEFV 228 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217 G++V R ++ D G Q L + ++ L + P G +L Y Sbjct: 229 GHDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLTVSP---PIG------------DLQSFY 273 Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277 F E++ V + + ++A N+ D +S +F + I D + Sbjct: 274 KESKKRFDEDEEFKKRAYQCVVQLQNKTPNFIQAWNLICD--VSRKEFQK-----IYDCL 326 Query: 278 D--NLARQGYVYE----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 D + R Y+ G++ + K + D RK ++F G V ++KSDG + Sbjct: 327 DISIIDRGESFYQDRMIGVVKEFEEKGLVQVDEGRK-VVFPP---GCSVPLTIVKSDGGF 382 Query: 332 TYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TY +DLA K + E D +IYV+ S + +++ + + + ++ R Sbjct: 383 TYDTSDLAALKQRLQEEKADMIIYVIDSGQAIHMQNVFSAGRMIGWYDPKVT-------R 435 Query: 391 LYRDGMPI-------KMSKRAGDFITLRHVVDE------------------------VGS 419 + G + K R+GD + L ++DE Sbjct: 436 IEHAGFGVVLGEDKKKFKTRSGDTVRLIDLLDEGLKRSMEKLKDKGRDKVLTAEELLAAQ 495 Query: 420 DSVRFMMLW-------RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 SV F + R N + FD K+ + + N Y+ YAY R RSI R A Sbjct: 496 TSVAFGCIKYADLSHNRMNDYIFSFD--KMLD-DRGNTAAYLLYAYTRIRSIARLANISD 552 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 DL +I + + E +L + +P +++ + L YLY+LA+ F Sbjct: 553 EDLHKAAKETEIILEHEK----EWKLSKCILRFPEILQKILDDLLLHTLCDYLYELATTF 608 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + R K+ M RL L A A+++ G +I+G++ +M Sbjct: 609 TEFYDNCYCVEKDRQT-GQIVKVNMSRLLLCDATAAVMAKGFDILGIKPVQKM 660 >gi|296328834|ref|ZP_06871347.1| arginine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154065|gb|EFG94870.1| arginine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 569 Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 135/581 (23%), Positives = 247/581 (42%), Gaps = 88/581 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AMI S+ +G +P IAE + ++ + +AG GFIN++LS Y I Sbjct: 39 GDYQCNFAMINSKIIGDNPRKIAEEVKNNFPYGDVIEKLEVAGPGFINIFLSDKY---IS 95 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 +SI G +Y + + + KV I+F S N MH+GH R ++G++++ + F GY+V Sbjct: 96 NSIKKIGEDYDFSFLNRKGKVIIDFSSPNIAKRMHIGHLRSTIIGESVSRIYRFLGYDVV 155 Query: 163 REYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGK-----ELADK 216 + +I D G Q L + W ++A N + E VY+K + L D Sbjct: 156 ADNHIGDWGTQFGKLIVGYRNWLDKKAYKKNAIEELE----RVYVKFSDEAEKDPSLEDL 211 Query: 217 YSSEL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274 +EL + EE+ + K++ ++ +K K L++ D + E ++ ++ Sbjct: 212 ARAELKKVQDGEEENTKLWKEFITES-LKEYNKLYKRLDVHFDTYYGESFYNDMMADVVK 270 Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334 +++D + D K LF + K DG+Y Y Sbjct: 271 ELVDKKI-----------AVDDDGAKVVFFDEKDNLFPCI---------VQKKDGAYLYS 310 Query: 335 AADLAYFKC-KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393 +D+A K K + MIY+ + + K+ + + + ++ ++R + Sbjct: 311 TSDIATVKFRKNTYDVNRMIYLTDARQQDHFKQFFKITDMLGWNIEKYHIWFG-IIR-FA 368 Query: 394 DGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMM 426 DG+ +S R G+ I L ++DE VG SV++ Sbjct: 369 DGI---LSTRKGNVIKLEELLDEAHSRAYDVVNEKNPNLSEGEKQNIAEVVGVSSVKYAD 425 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 L + + F++ K+ + N Y+ Y YAR +SI R+ +L+ DL I Sbjct: 426 LSQNKQSDIIFEWDKML-SFEGNTAPYLLYTYARIQSILRKV----AELNIDLNENIEIK 480 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 E++ + S L +L +P + A +P +A YLY+L+ + +++ P L Sbjct: 481 TENKIEKS---LATYLLAFPISVLKAGETFKPNLIADYLYELSKKLNSFYNNC---PIL- 533 Query: 547 FVQANNRKLTMM--RLQLVHAVASIINSGLNIIGVESPNEM 585 N+ + + R L+ ++ GL ++G+ N+M Sbjct: 534 -----NQDIETLKSRALLIKKTGEVLKEGLELLGIPILNKM 569 >gi|213514264|ref|NP_001133937.1| Arginyl-tRNA synthetase, cytoplasmic [Salmo salar] gi|209155884|gb|ACI34174.1| Arginyl-tRNA synthetase, cytoplasmic [Salmo salar] Length = 660 Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 137/580 (23%), Positives = 246/580 (42%), Gaps = 84/580 (14%) Query: 49 AAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS 108 A M+ S+ L ++P IAE I I + ++ IAG GFIN++L S++ K+L++++++ Sbjct: 122 AQMMKSKGLKVNPREIAEKIQQNIPDNELIEKTEIAGPGFINVHLKRSFVSKLLTNLLLN 181 Query: 109 GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168 G++ + + KV ++F S N MHVGH R ++GD++ L F GY+V R ++ Sbjct: 182 GVQPPP--LERKKKVVVDFSSPNIAKEMHVGHLRSTIIGDSMCRLFEFLGYDVLRLNHVG 239 Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228 D G Q L + ++ L + P G Y KE ++ E +F + Sbjct: 240 DWGTQFGMLIAHLQDKFPNYLTVSP---PIGDLQAFY-----KESKKRFDEE-EDFKKRA 290 Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID--NLARQGYV 286 + +VK S +K N+ D +S +F + + + +D + R Sbjct: 291 YQCVVKLQSKDPAF------IKGWNLICD--VSRKEFQK-----VYNCLDIQIIERGESF 337 Query: 287 YE----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342 Y+ ++ ++K + D RK ++F G + ++KSDG YTY +DLA + Sbjct: 338 YQEKMIAVVKEFEAKGLVEMDEGRK-IVFAP---GQQIPLTVVKSDGGYTYDTSDLAALR 393 Query: 343 CK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI--- 398 + ++ D +IYV S + + + + A A + ++ R+ G + Sbjct: 394 QRLFDEKADIIIYVTDSGQATHFQVVFAAAQMIGWYDPKV-------TRVEHAGFGVVLG 446 Query: 399 ----KMSKRAGDFITLRHVVDE-----------------------------VGSDSVRFM 425 K R+GD + L ++DE V +++ Sbjct: 447 EDKKKFKTRSGDTVRLMDLLDEGLKRSMDKLKEKDRDKVLSTEELTKAQHSVAFGCIKYA 506 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 L F F K+ + + N Y+ YA+ R RSI R A L +V+ Sbjct: 507 DLSHNRINDYVFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLANIDEVALRKAAETTDVL 565 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 Q + E +L L +P +++ + L YLY+LA+ F + + Sbjct: 566 LQHDK----EWKLGKCLMRFPEILQKILDDLLLHTLCDYLYELATTFTEFYDSCYCIEKD 621 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R K+ M R+ L A A+I+ G +I+G+ + M Sbjct: 622 RQT-GEVVKVNMWRMLLCDATAAIMAKGFDILGINPVSRM 660 >gi|254369750|ref|ZP_04985760.1| arginyl-tRNA synthetase [Francisella tularensis subsp. holarctica FSC022] gi|157122709|gb|EDO66838.1| arginyl-tRNA synthetase [Francisella tularensis subsp. holarctica FSC022] Length = 581 Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 147/630 (23%), Positives = 261/630 (41%), Gaps = 106/630 (16%) Query: 11 LKNYLKEIDCKIKVE---KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 ++NYL E K+ + + ++V D GH N AM L++ PL IAE Sbjct: 3 IENYLSETLAKVFQKLGYAESFAKVVTSTREDV--GHFQCNGAMPLAKFAKKPPLAIAEE 60 Query: 68 IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127 IV I + + +A GFIN+ L+P +L + + S ++G KV ++F Sbjct: 61 IVEHIDAEDIFAKLEVAKPGFINITLAPKFLADTTNRFLNSN-KFGVQNNLPNRKVVLDF 119 Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187 N PMHVGH R A++GD L + F G V + ++ D G Q+ L + + Q Sbjct: 120 GGPNVAKPMHVGHIRSALLGDALQRIHRFCGDTVVSDVHLGDWGTQMGMLIEEIKLQSPQ 179 Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKY------SSELLNFPEEKWLPIVK------- 234 +Y +++ G YP V +ELA+ Y +N E+ L + Sbjct: 180 LVYFDEN--YTGEYPTESPITV-QELAEIYPRASKRCKSDINEMEKARLATFELQQGRRG 236 Query: 235 -----DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 + V+ + ++ D +L++ D+++ E D ++ I ++I ++YE Sbjct: 237 YVALWQHFVRISIDAVKKDFDSLDVHFDLWLGESDANKF----IDEMISYFQANNFIYE- 291 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL--LKSDGSYTYFAADLA-YFKCKYE 346 + D ++ D PL +K DG Y DLA ++ + Sbjct: 292 ------DEGAWVIDTNK------------DGVPPLIVIKKDGGVMYGTTDLATLWQRSKD 333 Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVA---AAVSEKKAQINVLLCELVRLY------RDGMP 397 D +IYV+ S + K++ +VA VSEK C+L + +DG P Sbjct: 334 LDPDEIIYVVDKRQSLHFKQVFSVAERTKVVSEK--------CKLKHVAFGTVNGKDGRP 385 Query: 398 IKMSK-----------RAGDFITLR-------HVVDEVGSDSVRFMMLWRKNSELLDFDF 439 K + +A ++ R ++D++ +++F L + FD Sbjct: 386 FKTREGGVMHLADLISQAKEYAKNRMPDENDDSIIDQIAMATIKFGDLINNYANDYFFDL 445 Query: 440 CK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRN--VIPQESEFDTSE 495 K + + K P Y+ Y R +SI R+ IF D D ++ V+ +E+ E Sbjct: 446 EKFAQHEGKTGP--YLLYTVVRAKSILRK---IFGDNYDIKSLAKDYKVVNAHNEY---E 497 Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555 +L + L ++P ++ A +P+ + Y Y LA+ F+ + + N ++ L Sbjct: 498 EKLQLQLIQFPIAVQRAYENSQPHHICEYAYSLANSFNKFYVNCPIN------NLDDESL 551 Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R+ L A + ++IG+ P M Sbjct: 552 KKARIALCMATVKAMTIASDLIGISIPERM 581 >gi|309751074|gb|ADO81058.1| Arginyl-tRNA synthetase [Haemophilus influenzae R2866] Length = 577 Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 136/598 (22%), Positives = 227/598 (37%), Gaps = 112/598 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LGL+P A+ ++ ++ + + IAG GFIN++L+P++L + Sbjct: 37 GDYQANGIMAAAKKLGLNPREFAQKVLDNAQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 S+ +S G K T V I++ S N MHVGH R ++GD +A + F G+ V Sbjct: 97 SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204 R ++ D G Q L L F+R + Y+ D E V Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMQHEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYV 214 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 V + D+Y + W +V Q R L + D+ + E Sbjct: 215 ----VKLQSGDEYCRTM-------WKRLVDITMQQNQYNYAR--LNVTLTEKDV-MGESL 260 Query: 265 FHRGDPSPIRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322 ++ PS ++D L +QG E G L + K GD + Sbjct: 261 YNPMLPSIVKD----LKKQGLAVENDGALVVYLYEFKNKD--------------GDPMGV 302 Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY--------VKRLEAVAAAV 374 + K DG + Y D+A K +YE N V ++ V + Sbjct: 303 IVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYVPDSF 362 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 S + ++L +DG P K R G + L ++DE Sbjct: 363 SLEHKNFGMMLG------KDGKPFKT--RTGGTVKLADLLDEAIERATVLINEKNTNLSN 414 Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467 VG +V++ L + + FD+ + + N Y+QYAY R RSIF + Sbjct: 415 DEKESVIEAVGIGAVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNK 473 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 D + P + D E L + L ++ ++ P+ L YLY+ Sbjct: 474 T-------DINSTALLAAPLTIK-DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYE 525 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA +F + H + A + + + RL+L + GL ++G+++ +M Sbjct: 526 LAGIFSSFYEH------CPILNAEDEAVKLSRLKLALLTEKTLKQGLTLLGIKTVEKM 577 >gi|319776477|ref|YP_004138965.1| arginyl-tRNA synthetase [Haemophilus influenzae F3047] gi|329123983|ref|ZP_08252530.1| arginine--tRNA ligase [Haemophilus aegyptius ATCC 11116] gi|317451068|emb|CBY87301.1| arginyl-tRNA synthetase [Haemophilus influenzae F3047] gi|327467408|gb|EGF12906.1| arginine--tRNA ligase [Haemophilus aegyptius ATCC 11116] Length = 577 Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 137/594 (23%), Positives = 238/594 (40%), Gaps = 104/594 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N + ++ LGL+P A+ ++ +++ + + IAG GFIN++L+P++L + Sbjct: 37 GDYQANGIIAAAKKLGLNPREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 S+ +S G K T V I++ S N MHVGH R ++GD +A + F G+ V Sbjct: 97 SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220 R ++ D G Q L + Q + ++ +L E +Y A K+ E Sbjct: 155 RANHVGDWGTQFGMLI--AYLEKMQNEHASEMELQDLEAFY----------REAKKHYDE 202 Query: 221 LLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNIQH-----DIFISEDDFHRGDP- 270 F E+ +VK D + M K + D N QH ++ ++E D G+ Sbjct: 203 DEIFAEKARNYVVKLQSGDEYCRTMWKRLVDITMQQN-QHNYNRLNVTLTEKDV-MGESL 260 Query: 271 -SP-IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 +P + I+++L +QG E G L + K G+ + + K Sbjct: 261 YNPMLPSIVEDLKKQGLAVENDGALVVYLDEFKNKD--------------GNPMGVIVQK 306 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY--------VKRLEAVAAAVSEKK 378 DG + Y D+A K +YE N V ++ V + S + Sbjct: 307 KDGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYVPDSFSLEH 366 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 ++L +DG P K R G + L ++DE Sbjct: 367 KNFGMMLG------KDGKPFKT--RTGGTVKLADLLDEAIERSTVLINEKNTNLSNDEKE 418 Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VG +V++ L + + FD+ + + N Y+QYAY R RSIF + Sbjct: 419 AVIKAVGIGAVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNKT--- 474 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 D + P + D E L + L ++ ++ P+ L YLY+LA + Sbjct: 475 ----DINSTALLAAPLTIK-DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYELAGI 529 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + H + A + + + RL+L + GL ++G+++ +M Sbjct: 530 FSSFYEH------CPILNAEDESIKLSRLKLALLTEKTLKQGLTLLGIKTVEKM 577 >gi|313887918|ref|ZP_07821597.1| arginine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846084|gb|EFR33466.1| arginine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b] Length = 569 Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 155/621 (24%), Positives = 268/621 (43%), Gaps = 110/621 (17%) Query: 15 LKEIDCKIK-VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK 73 +K +D KI+ ++ K +D++ IE P + G + L++ +P IAE + +I Sbjct: 9 IKILDEKIEGLDAKEIDKM-IEVPPNYELGDFAF-PVFSLAKIYRKNPAMIAEELAGQI- 65 Query: 74 IDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP 132 D ++N Y++ S L +IL V +G+ G+ V +E+ S N Sbjct: 66 -DSKYFEKVENKNAYLNFYINKSILVEEILREAVDRKENFGKTNYGENKNVIVEYSSTNI 124 Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYN 191 P H+GH R V+GD+L + F G+ ++ D G Q L + W + A+ N Sbjct: 125 AKPFHIGHIRSTVIGDSLKRIYDFLGFNTIAINHLGDYGTQFGMLIYAYKTWGSKAAIEN 184 Query: 192 NDSDLPEGYYPGVYLKHVG--------KELADKYSSELLNF-PE--EKWLPIVKDYSVQA 240 + P +Y+K G K+ + EL N PE E W K+ S++ Sbjct: 185 D----PINELLKLYVKVNGVCEEDESVKDECRYWFKELENGNPEAVEIW-QWFKEVSLKE 239 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 ++ L+I D + E + P I ++ R+ V E +S+ + Sbjct: 240 FNRV----YDMLDIHFDSYNGESFYSDKMPGLIEEL-----REKKVLE------ESQGAE 284 Query: 301 KCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYE--RGFDNMIYV 355 ++D + D P ++KSDG+ Y DLA K ++E + + N IYV Sbjct: 285 VINLD-------------EFDLPPAIVVKSDGTTIYLTRDLAAAKYRHETYKPYKN-IYV 330 Query: 356 MGSDHSGYVKRLE-AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414 +GS S + +L+ A+ A + +I + +V L DG +S R G + L V+ Sbjct: 331 VGSQQSLHFNQLKSALKKAGYDWYDEIVHVPFGMVSL-EDGT---LSTRRGKVVYLEDVL 386 Query: 415 DE-----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 ++ VG +++F L+ N + D+ F K Sbjct: 387 NKATDKVREILDAREEEQGQKIENKEELAQAVGIGAIKFQELF--NGRIKDYTFNWDKTL 444 Query: 446 SKENPVF-YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 S E YVQY +AR S+ ++ DFD+ N I + SE+ +I L Sbjct: 445 SFEGETGPYVQYVHARICSLLKKG-------DFDI--NNEIDPSLLTEESEINIIRSLYN 495 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 + V+ +A EPY + Y +LA F+ ++ + + ++ KL RL L + Sbjct: 496 FTDVVVDACEKYEPYFITRYTVELAKNFNKFYNQTQ-------ILVDDEKLKNTRLMLCY 548 Query: 565 AVASIINSGLNIIGVESPNEM 585 AV ++I SGLN++G+++P +M Sbjct: 549 AVKNVIASGLNLLGIKAPEKM 569 >gi|261400736|ref|ZP_05986861.1| arginine--tRNA ligase [Neisseria lactamica ATCC 23970] gi|269209505|gb|EEZ75960.1| arginine--tRNA ligase [Neisseria lactamica ATCC 23970] Length = 572 Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 126/589 (21%), Positives = 244/589 (41%), Gaps = 86/589 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEALADNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P +L + + + ++ +G K V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRPEFLAQNIQT-ALNDARFGVAKTDKPKTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++AF G V R+ ++ D G Q L + + + +DL + Y Sbjct: 144 RVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203 Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 AD + L +E L + K D S+ + D L ++ + E ++ Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323 ++ ++D+L ++G E D +++F G+ Sbjct: 262 ----DDLQAVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302 Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVS----EKK 378 + K G + Y + DLA + + R D ++YV+ + + ++L + + K Sbjct: 303 VQKQGGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPEDAK 362 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 A+ + + +DG P K R+GD + L ++ E Sbjct: 363 AE---FIGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAA 417 Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VG +V++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 418 KIGKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG-- 474 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 ++D V+ + E QL L ++ V+++ P+ LA YLY +A++ Sbjct: 475 ----EWDATAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATL 525 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 F + P L+ A+ RLQL + GL+++G++ Sbjct: 526 FSRFY---EACPILKAESASRNS----RLQLAKLTGDTLKQGLDLLGID 567 >gi|332365456|gb|EGJ43217.1| arginine--tRNA ligase [Streptococcus sanguinis SK355] Length = 562 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 144/600 (24%), Positives = 246/600 (41%), Gaps = 110/600 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E+P+ G ++ A L++ P IA I I D V G ++N + Sbjct: 26 LLEQPKSSELGDIAF-PAFSLAKTERKAPQAIAAYIAENIDT-AHFDKVVATGP-YVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 LS + + +++ ++ G +YG+ G G V I+ S N P VGH R V+GD L+ Sbjct: 83 LSKAEISGQVIKEVIKDGADYGQQNEGNGENVTIDLSSPNIAKPFSVGHLRSTVIGDALS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY + ++ D G Q L ++ W Q+A+ N P +Y++ + Sbjct: 143 NIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKWGSQEAVEAN----PIDELLKLYVR-IN 197 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 E+ + S L+ W ++D +A + + RD+ L N +++ E D Sbjct: 198 AEIENDPS---LDDEGRLWFKKLEDGDPEATELWQWFRDESLMEFNRIYELLGVEFDSLN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323 G+ + + I L +G + E SK D+ +D + P Sbjct: 255 GEAFYNDKMDEGIQILEEKGLLQE-------SKGASIVDL-------------EDFNLPP 294 Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374 + KSDG+ Y D+A Y Y F +YV+G + + + ++L+AV + Sbjct: 295 AMIKKSDGATLYITRDIATAIYRARTY--NFVKNVYVVGQEQANHFRQLKAVLKKMGFDW 352 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 S+ ++ L R K+S R G+ I L + E Sbjct: 353 SDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLLEAISRAKSQIEAKNPDLEN 405 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG +V+F L DFD V + + P Y+QYAYAR +SI R+A Sbjct: 406 KEAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQSILRKA 463 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 F + S D ++I L ++ RV++ A EP +A Y L Sbjct: 464 N----------FQPDAEATYSLNDPESWEIIKLLQDFGRVVKRAADNYEPSLIAKYAISL 513 Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A F+ +++H R E+P RL L ++ A ++ L ++GVE+P +M Sbjct: 514 AQAFNKYYAHTRILDESPERD-----------SRLALSYSTAVVLKEALRLLGVEAPEKM 562 >gi|50403850|gb|AAT76680.1| arginyl-tRNA synthetase 2 [Oenococcus oeni] Length = 532 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 141/576 (24%), Positives = 248/576 (43%), Gaps = 96/576 (16%) Query: 53 LSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE 111 LS+ L P +A I R+ K D + + + G +IN +L L S +++ Sbjct: 10 LSKFFHLSPDQVAFSIYNRLNKSDTNFEKIEHNG-AYINFFLDRKREASTLISDIINNDS 68 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG+N G + +E S N PM +GH R ++G++L+ + +GY+ + ++ D G Sbjct: 69 YGKNNAGNKKTIIVELSSPNIAKPMSMGHLRSTMIGESLSRIANENGYKTIKINHLGDWG 128 Query: 172 AQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSELLNF----P 225 Q + + W + + N D Y + + EL++ S P Sbjct: 129 TQFGLMIEAYKLWGNKDIIEQNPVDELVKLYVRINKEAETNPELSEAGRSWFKKLEDGDP 188 Query: 226 EE----KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281 E KW K+ S++ K+ + L + D E F++ S I D++ N Sbjct: 189 EARELWKWF---KNVSLREFNKV----YQRLGVTFDSMNGES-FYQDKMSVIIDLLKN-- 238 Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA-- 339 +GIL +S+ Q D+ + + +L+SDG+ Y DLA Sbjct: 239 ------KGILT--ESRGAQIVDLPSLLPAYNLPV------SIILRSDGATQYATRDLATA 284 Query: 340 -YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 Y + Y FD +YV+G++ Y K+++A+ K A N ++ +Y + Sbjct: 285 FYRQTTYH--FDKCLYVVGAEQKEYFKQIKAIL-----KLAGFN-WSDDMEHIYFGLITF 336 Query: 399 ---KMSKRAGDFITLRHVVD-------------------------EVGSDSVRFMMLWRK 430 KMS R G+ + L V+D +VG+ +V F L Sbjct: 337 NGKKMSTRKGNVVKLEQVLDSAHKLAKNQIAEKNPNLSNSDKVAEQVGTGAVIFNDLMND 396 Query: 431 NSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489 + +DFD + VK + P YVQY + R SI R++ I D++ + Sbjct: 397 RTLSIDFDLDQIVKFEGDTGP--YVQYTHVRAVSILRKSS-IKIDINDAI---------K 444 Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549 D ++ L+ YP +++ A I +EP +A YL +LA F+ ++S + Sbjct: 445 LLDNDSWAVVSKLSVYPDIVKRAWILREPSIIAKYLLNLAHEFNSYYSKVH-------IL 497 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++L+ RL LV AVA ++ GL ++ V++P++M Sbjct: 498 VEDKQLS-SRLALVDAVAIVLKKGLELLDVQAPDQM 532 >gi|167855456|ref|ZP_02478221.1| hypothetical protein HPS_03952 [Haemophilus parasuis 29755] gi|167853450|gb|EDS24699.1| hypothetical protein HPS_03952 [Haemophilus parasuis 29755] Length = 575 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 127/580 (21%), Positives = 233/580 (40%), Gaps = 78/580 (13%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LGL+P A+ +V + ++ + + IAG GFIN++L+P++L + Sbjct: 37 GDYQANGIMGAAKKLGLNPREFAQKVVDNVDLNGIAEKLEIAGPGFINIFLAPTWLAQQT 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + SG + G NL + V +++ S N MHVGH R ++GD++ ++ F G +V Sbjct: 97 EN-AFSGDKLGINL-NQAQTVVVDYSSPNVAKEMHVGHLRSTIIGDSVVRVLEFLGNKVI 154 Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204 R ++ D G Q L L F+R + Y++D E V Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHASEMELSDLEAFYRTAKEHYDSDEVFAEKARNYV 214 Query: 205 YLKHVGKELADKYSSELLNFPEEKWL-------------PIVKDYSVQAMMKIIRDDLKA 251 G + +L+N ++ ++ + M+ I DLKA Sbjct: 215 VKLQSGDDYCRTMWKKLVNITMQQNQHNYNRLNVTLTENDVMGESLYNPMLPEIVADLKA 274 Query: 252 --LNIQHD--IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307 L ++ D + + D+F D P+ I+ G++Y + DR Sbjct: 275 QGLAVEDDGALVVFLDEFKNKDGDPMGVIVQK-KDGGFLYTTTDIAAAKYRFETLKADRA 333 Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367 L+F T + + L + + Y + N ++G D + R Sbjct: 334 -LVFSDTRQSQHMQQAWLITRKA--------GYVPDSFSLEHHNFGMMLGKDGKPFKTRT 384 Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL--RHVVDEVGSDSVRFM 425 V L +L+ + ++++ D + VV+ V +V++ Sbjct: 385 GGT------------VKLADLLDEAVERAEKLIAEKNPDLTACEKQAVVEAVAIGAVKYS 432 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 L + + FD+ + + N Y+QYAY R RSIF +A +D + N++ Sbjct: 433 DLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRVRSIFSRA-----GIDPNSLTANIV 486 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 D E L + L ++ + P+ L YLY+LA +F + P L Sbjct: 487 L----IDEKERNLAIKLLQFEEAVTVVAKDGTPHVLCQYLYELAGIFSSFY---EACPIL 539 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + RL+L H A + GL+++G+++ +M Sbjct: 540 NAEES----IKQSRLKLAHLTAKTLKQGLDLLGIKTVEKM 575 >gi|333025212|ref|ZP_08453276.1| putative arginyl-tRNA synthetase [Streptomyces sp. Tu6071] gi|332745064|gb|EGJ75505.1| putative arginyl-tRNA synthetase [Streptomyces sp. Tu6071] Length = 597 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 135/589 (22%), Positives = 235/589 (39%), Gaps = 84/589 (14%) Query: 47 TNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIV 106 N + L++ +P +A +VA + + V ++G GF+N+ +S L + L++ Sbjct: 43 ANGVLALAKKAKANPRELATRVVAALPDSTVIKDVEVSGPGFLNITVSDEALVRNLAARA 102 Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166 +G G + I++ N MHVGH R AV+GD + ++ F+G V R ++ Sbjct: 103 AAGERLGVPYAEHPGRTVIDYAQPNVAKEMHVGHLRSAVIGDAVMRMLEFTGETVIRRHH 162 Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226 I D G Q L + + ++DS + ++ + Y + F E Sbjct: 163 IGDWGTQFGMLIQYLMEHPAELDRSSDSSEVSQAAGEAAMSNLNR----VYKASKALFDE 218 Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD------FHRGDPSPIRDIIDNL 280 ++ KD + + ++ + D + L H F+ E F + D IRD D + Sbjct: 219 DEGF---KDRARRRVVDLQAGDEETLAFWHR-FVDESKVYFNALFGKLDMD-IRD-ADIV 272 Query: 281 ARQGYVYEGILPPPKSKTTQKCD-MDRKQLLFRS----TMVGDDVDRP--------LLKS 327 GY + CD +++ + RS + DDV P + KS Sbjct: 273 GESGY---------NDMLAETCDLLEQSGVAVRSEGALCVFFDDVKGPDGKPVPLIVRKS 323 Query: 328 DGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-VLL 385 +G + Y A DL+ + + ++ D ++YV+ + + + K + A + V L Sbjct: 324 NGGFGYAATDLSAIRNRVFDLKADTLLYVVDARQALHFKMVFETAKRAGWLSEDVRAVQL 383 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------------- 416 L DG P K RAG+ + L ++DE Sbjct: 384 AFGTVLGADGKPFKT--RAGESVRLVDLLDEAVTRATAVVREKDAKGRLSEDEIAERGAQ 441 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG +V++ L S FD ++ + + V Y+QYAYAR +SI R+A D Sbjct: 442 VGIGAVKYADLSTSASRDYKFDLDQMVSLNGDTSV-YIQYAYARIQSILRRATDSGA--- 497 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 P E +E L +HL + + AT P+KLA YLY AS++ + Sbjct: 498 ----PAPAAHPELPLAPAERALGLHLDAFGDQVLEATHEYAPHKLAAYLYQTASLYTTFY 553 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N ++ RL L + +GL ++G+ +P + Sbjct: 554 DQCHV-----LSDDNAPEVVANRLFLCELTGKTLAAGLGLLGIRAPKSL 597 >gi|326778607|ref|ZP_08237872.1| arginyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1] gi|326658940|gb|EGE43786.1| arginyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1] Length = 590 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 142/592 (23%), Positives = 236/592 (39%), Gaps = 93/592 (15%) Query: 45 LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104 N + L++ L +P +A + A + + + ++G GF+N+ L+ + + L++ Sbjct: 41 FQANGILALAKKLKGNPRELAAQVTAALPAGGLIKDIEVSGPGFLNVTLTDRAIVETLAA 100 Query: 105 IVVSG-IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR 163 G G L I++ N MHVGH R AV+GD + ++ F+G V R Sbjct: 101 RAADGEGRLGVPLKDDAGTTVIDYAQPNVAKEMHVGHLRSAVIGDAVVRILEFTGENVVR 160 Query: 164 EYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223 ++I D G Q L + + AL ++ +G L V KE S L + Sbjct: 161 RHHIGDWGTQFGML-IQYLIEHPGAL-QHEGGPGDGEAAMSTLNRVYKE-----SRALFD 213 Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED-----------DFHRGDP-- 270 EE K S ++ + D L + H F+ E D DP Sbjct: 214 SDEE-----FKARSRDRVVALQAGDPGTLELWHR-FVDESKIYFHSVFDKLDMEIRDPDI 267 Query: 271 ---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLL- 325 S D+++ R IL +T + +F + G D +R PL+ Sbjct: 268 VGESGYNDMLEETCR-------IL----EETGVAVRSEGALCVFFDDVKGPDGNRVPLIV 316 Query: 326 -KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN- 382 K++G Y Y A DL+ + + + D ++YV+ + S + + + A + Sbjct: 317 KKTNGGYGYAATDLSAVRNRVQDLKADTLLYVVDARQSLHFRMVFETARRAGWLGDDVKA 376 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416 V L L +DG P K R G+ + L ++DE Sbjct: 377 VQLAFGTVLGKDGKPFKT--REGETVRLEDLLDEAVQRATAVVRDKAEKVGLSEEEIVEN 434 Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +V++ L FD ++ + V Y+QYAYAR RSI R+A D P Sbjct: 435 GRYVGIGAVKYADLSTSAVRDYKFDLDQMVALHGDTSV-YLQYAYARIRSILRKAGDAVP 493 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 E E +E L +HL ++ V+ EP+KLA YLY LAS Sbjct: 494 ----------AAHPELELAPAERALGLHLDQFGEVLAEVGEGYEPHKLAAYLYQLAS--- 540 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H + + ++ N ++ RL LV A ++ G+ ++G+ +P + Sbjct: 541 -HLTTFYDQCQV-LSPDNAPEVVENRLFLVELTARTLHRGMALLGIRTPERL 590 >gi|251792745|ref|YP_003007471.1| arginyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700] gi|247534138|gb|ACS97384.1| arginyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700] Length = 577 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 138/601 (22%), Positives = 235/601 (39%), Gaps = 118/601 (19%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LG++P A+L++A+ ++ + IAG GFIN++L +L + + Sbjct: 37 GDYQANGIMPAAKKLGINPREFAQLVLAKAELQDITEKTEIAGPGFINIFLKDGWLAENI 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + V + G + K T V +++ S N MHVGH R ++GD + + F G V Sbjct: 97 GN-AVKDPKLGIHHQDKQTVV-VDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNHVI 154 Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204 R ++ D G Q L L F+R + Y+ D E V Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHASEMELCDLEAFYRAAKKHYDEDPIFAEKARNYV 214 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 V + D+Y + W +VK M+ + + LN+ +D Sbjct: 215 ----VKLQSGDEYCRTM-------WQKLVK-----ITMQQNQHNYDRLNV---TLTEKDV 255 Query: 265 FHRGDPSP-IRDIIDNLARQGYVYEG------ILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 +P + I+++L +QG E L K+K G Sbjct: 256 MGESLYNPMLPGIVEDLKKQGLAVEDDGAWVVYLDEFKNKD------------------G 297 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG----SDH--SGYVKRLEAVA 371 + + K DG + Y D+A K +YE N V S H ++ +A Sbjct: 298 GSMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGY 357 Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------- 416 A S + N + L +DG P K R+GD + L ++DE Sbjct: 358 APDSFQLEHKNFGMM----LGKDGKPFKT--RSGDTVKLADLLDEAIERAGVLISQKSTA 411 Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 VG SV++ L + + FD+ + + N Y+QYAY R RSI Sbjct: 412 LSDQEKADVIEAVGIGSVKYADLSKNRTTDYVFDWDNMLS-FEGNTAPYMQYAYTRIRSI 470 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 F +++ +++ Q S D E L + L ++ I+ P+ L Y Sbjct: 471 FNRSQIALSEVE--------QAQLSITDEKERALAIKLLQFEEAIQIVAKDGTPHVLCTY 522 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 LY+LA VF + H + ++++ + RL+L + GL ++G+++ + Sbjct: 523 LYELAGVFSSFYEH------CPILNNEDQQVKLSRLKLALLTERTLKQGLGLLGIKTVEK 576 Query: 585 M 585 M Sbjct: 577 M 577 >gi|237741537|ref|ZP_04572018.1| arginyl-tRNA synthetase [Fusobacterium sp. 4_1_13] gi|229429185|gb|EEO39397.1| arginyl-tRNA synthetase [Fusobacterium sp. 4_1_13] Length = 569 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 137/582 (23%), Positives = 247/582 (42%), Gaps = 90/582 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AMI S+ +G +P IAE I V+ + +AG GFIN++LS Y I Sbjct: 39 GDYQCNFAMINSKIIGDNPRKIAEEIKNNFPCGDVVEKLEVAGPGFINIFLSDKY---IS 95 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 +SI G Y + + + KV I+F S N MH+GH R ++G+ + + F GY+V Sbjct: 96 NSIKKIGENYDFSFLNRKGKVIIDFSSPNIAKRMHIGHLRSTIIGEAVCRIYKFLGYDVV 155 Query: 163 REYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVGK-----ELADK 216 + +I D G Q L + W ++A N + E VY+K + L D Sbjct: 156 ADNHIGDWGTQFGKLIVGYRKWLNREAYEKNAIEELE----RVYVKFSDEAEKDPSLEDL 211 Query: 217 YSSEL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274 +EL + EE+ + K++ ++ +K K L++ D + E ++ ++ Sbjct: 212 ARAELKKVQDGEEENTKLWKEFITES-LKEYNKLYKRLDVHFDTYYGESFYNDMMGDVVK 270 Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334 +++D + D K LF + K DG+Y Y Sbjct: 271 ELVDKKI-----------AVDDDGAKVVFFDEKDNLFPCI---------VQKKDGAYLYS 310 Query: 335 AADLAYFKC-KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393 +D+A K K + MIY+ + + K+ + + + ++ ++R + Sbjct: 311 TSDIATVKFRKNTYDVNRMIYLTDARQQDHFKQFFKITDMLGWNIEKYHIWFG-IIR-FA 368 Query: 394 DGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMM 426 DG+ +S R G+ I L ++DE VG SV++ Sbjct: 369 DGI---LSTRKGNVIKLEELLDEAHSRAYDVVNEKNPNLSEEEKQNIAEVVGVSSVKYAD 425 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV-I 485 L + + F++ K+ + N Y+ Y YAR +SI R+ + DL+ +N+ I Sbjct: 426 LSQNKQSDIIFEWDKML-SFEGNTAPYLLYTYARIQSILRKVTEQNIDLN-----KNIEI 479 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 +++F+ S L +L +P + A +P +A YLY+L+ + +++ P L Sbjct: 480 KTDNKFEKS---LATYLLVFPISVLKAAETFKPNLIADYLYELSKKLNSFYNNC---PIL 533 Query: 546 RFVQANNRKLTMM--RLQLVHAVASIINSGLNIIGVESPNEM 585 N+ + + R L+ ++ GL ++G+ N+M Sbjct: 534 ------NQDIETLKSRTLLIKKTGEVLKEGLGLLGIPVLNKM 569 >gi|333029612|ref|ZP_08457673.1| Arginyl-tRNA synthetase [Bacteroides coprosuis DSM 18011] gi|332740209|gb|EGJ70691.1| Arginyl-tRNA synthetase [Bacteroides coprosuis DSM 18011] Length = 597 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 138/609 (22%), Positives = 269/609 (44%), Gaps = 92/609 (15%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 ++ +++ + GHL+ L R P A+ + +K + + S F KGF+N Sbjct: 27 QVQLQKTKKEFEGHLTVVVFPFL-RMSRKAPEATAQELGEYLKANEPIISNFNVIKGFLN 85 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDT 149 L ++PS ++L+ I YG +G+ +K V IE+ S N P+H+GH R ++G + Sbjct: 86 LIIAPSCWVELLNDIHADA-HYGIKEVGEDSKLVMIEYSSPNTNKPLHLGHVRNNLLGHS 144 Query: 150 LASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRYQQ-ALYNNDSDLPEGYYPGVYL 206 L+ +MA +G +V + +ND G I + LA + + + + D G Y + Sbjct: 145 LSKIMAANGNKVVKTNIVNDRGIHICKSMLAWAKYGKGETPESSGKKGDHLVGDYYVAFD 204 Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD--LKAL--NIQHDIFISE 262 KH ELA+ S + + E ++K+ + + ++K +D ++AL + ++ Sbjct: 205 KHYKAELAELKSKGMSDEEAEASSVLMKE-AREMLVKWEANDPEVRALWNKMNGWVYTGF 263 Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR---KQLLFR------- 312 D+ ++ R G ++ I + K +D K L F+ Sbjct: 264 DETYK--------------RLGVSFDKIYYESDTYLEGKEKVDEGLAKGLFFKKEDGSVW 309 Query: 313 STMVGDDVDRP-LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVK----R 366 + + + +D+ LL++DG+ Y D+ K ++ + D MIYV+G++ + + + Sbjct: 310 ADLTKEGLDQKLLLRADGTSVYMTQDIGTAKMRFSDYSIDQMIYVVGNEQNYHFQVLSIL 369 Query: 367 LEAVAAAVSEKKAQINVLLCELVR---LYRDGMPIKMSKRAGDFI-----------TLRH 412 L+ + A + + + EL R+G + + I L H Sbjct: 370 LDKLGFAWGKDLVHFSYGMVELPEGKMKSREGTVVDADDLMDEMIDTAKETSKELGKLDH 429 Query: 413 VVDE--------VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQY 456 + DE VG ++++ +L RKN E +DF+ N ++QY Sbjct: 430 ISDEEANEIARIVGLGALKYFILKVDARKNMTFNPKESIDFN---------GNTGPFIQY 480 Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 YAR +S+ R+AK+ + P++V +E E LI +A++ +++ A Sbjct: 481 TYARIQSVLRKAKEAGM-----VLPKSV-DVTTEISEKERGLIQLVADFAVIVDQAGKDY 534 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 P +A Y+Y+L ++ + ++ + K+ + RL L VA I +G+++ Sbjct: 535 SPSGIANYIYELVKEYNQFYHD------FSILREEDEKVKLFRLVLSQTVAETIKNGMDL 588 Query: 577 IGVESPNEM 585 +G+E P+ M Sbjct: 589 LGIEVPDRM 597 >gi|89256875|ref|YP_514237.1| arginyl-tRNA synthetase [Francisella tularensis subsp. holarctica LVS] gi|115315254|ref|YP_763977.1| arginyl-tRNA synthetase [Francisella tularensis subsp. holarctica OSU18] gi|156503050|ref|YP_001429115.1| arginyl-tRNA synthetase [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009231|ref|ZP_02274162.1| arginyl-tRNA synthetase [Francisella tularensis subsp. holarctica FSC200] gi|290953627|ref|ZP_06558248.1| arginyl-tRNA synthetase [Francisella tularensis subsp. holarctica URFT1] gi|295313060|ref|ZP_06803754.1| arginyl-tRNA synthetase [Francisella tularensis subsp. holarctica URFT1] gi|109894993|sp|Q2A215|SYR_FRATH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|122324749|sp|Q0BKP4|SYR_FRATO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|166232787|sp|A7NDV6|SYR_FRATF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|89144706|emb|CAJ80037.1| Arginyl-tRNA synthetase [Francisella tularensis subsp. holarctica LVS] gi|115130153|gb|ABI83340.1| arginine--tRNA ligase [Francisella tularensis subsp. holarctica OSU18] gi|156253653|gb|ABU62159.1| arginyl-tRNA synthetase [Francisella tularensis subsp. holarctica FTNF002-00] Length = 581 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 147/630 (23%), Positives = 261/630 (41%), Gaps = 106/630 (16%) Query: 11 LKNYLKEIDCKIKVE---KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 ++NYL E K+ + + ++V D GH N AM L++ PL IAE Sbjct: 3 IENYLSETLAKVFQKLGYAESFAKVVTSTREDV--GHFQCNGAMPLAKFAKKPPLAIAEE 60 Query: 68 IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127 IV I + + +A GFIN+ L+P +L + + S ++G KV ++F Sbjct: 61 IVEHIDAEDIFAKLEVAKPGFINITLAPKFLADTTNRFLNSN-KFGVQNNLPNRKVVLDF 119 Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187 N PMHVGH R A++GD L + F G V + ++ D G Q+ L + + Q Sbjct: 120 GGPNVAKPMHVGHIRSALLGDALQRIHRFCGDTVISDVHLGDWGTQMGMLIEEIKLQSPQ 179 Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKY------SSELLNFPEEKWLPIVK------- 234 +Y +++ G YP V +ELA+ Y +N E+ L + Sbjct: 180 LVYFDEN--YTGEYPTESPITV-QELAEIYPRASKRCKSDINEMEKARLATFELQQGRRG 236 Query: 235 -----DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 + V+ + ++ D +L++ D+++ E D ++ I ++I ++YE Sbjct: 237 YVALWQHFVRISIDAVKKDFDSLDVHFDLWLGESDANKF----IDEMISYFQANNFIYE- 291 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL--LKSDGSYTYFAADLA-YFKCKYE 346 + D ++ D PL +K DG Y DLA ++ + Sbjct: 292 ------DEGAWVIDTNK------------DGVPPLIVIKKDGGVMYGTTDLATLWQRSKD 333 Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVA---AAVSEKKAQINVLLCELVRLY------RDGMP 397 D +IYV+ S + K++ +VA VSEK C+L + +DG P Sbjct: 334 LDPDEIIYVVDKRQSLHFKQVFSVAERTKVVSEK--------CKLKHVAFGTVNGKDGRP 385 Query: 398 IKMSK-----------RAGDFITLR-------HVVDEVGSDSVRFMMLWRKNSELLDFDF 439 K + +A ++ R ++D++ +++F L + FD Sbjct: 386 FKTREGGVMHLADLISQAKEYAKNRMPDENDDSIIDQIAMATIKFGDLINNYANDYFFDL 445 Query: 440 CK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRN--VIPQESEFDTSE 495 K + + K P Y+ Y R +SI R+ IF D D ++ V+ +E+ E Sbjct: 446 EKFAQHEGKTGP--YLLYTVVRAKSILRK---IFGDNYDIKSLAKDYKVVNAHNEY---E 497 Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555 +L + L ++P ++ A +P+ + Y Y LA+ F+ + + N ++ L Sbjct: 498 EKLQLQLIQFPIAVQRAYENSQPHHICEYAYSLANSFNKFYVNCPIN------NLDDESL 551 Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R+ L A + ++IG+ P M Sbjct: 552 KKARIALCMATVKAMTIASDLIGISIPERM 581 >gi|296110389|ref|YP_003620770.1| arginine--tRNA ligase [Leuconostoc kimchii IMSNU 11154] gi|295831920|gb|ADG39801.1| arginine--tRNA ligase [Leuconostoc kimchii IMSNU 11154] Length = 563 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 140/592 (23%), Positives = 244/592 (41%), Gaps = 95/592 (16%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +E P+ G ++ L++ P IA +V +ID + +A +IN +L Sbjct: 27 LEAPKSTDLGDVAF-PTFTLAKTRHQAPQQIAAALVT--EIDQEGFEKVVATGPYINFFL 83 Query: 94 SPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 R L I+ +G + G G V I+ S N PM +GH R V+G+ LA+ Sbjct: 84 DKQVTSRHTLEKILTEQANFGSHTTGNGANVTIDMSSPNIAKPMSMGHLRSTVIGNALAN 143 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 + A +GY + ++ D G Q L Y + N++++ P L E Sbjct: 144 ITAKNGYVPVKINHLGDWGTQFGKLI------YAYKTWGNEAEVKAD--PIATLLRYYVE 195 Query: 213 LADKYS-SELLNFPEEKWLPIVK--DYSVQAMMKIIR-DDLKALNIQHDIFISEDDFHRG 268 +K + LN W ++ D + + R + LK +D E D G Sbjct: 196 FHEKAQDDDSLNDEGRAWFKKLENGDQEAHKLWQWFRAESLKEFTAIYDRLDIEFDSFNG 255 Query: 269 DP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 + + ++D L+ + + KS+ Q D+ + + D++ ++ Sbjct: 256 EAFYNDKMDKVVDMLSDKKLLV-------KSQGAQIVDL---------SSINDNLTPAMI 299 Query: 326 K-SDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381 K SDG+ Y DLA Y K Y F +YV+G + + +++AV + + A Sbjct: 300 KRSDGATLYMTRDLAAAVYRKETYR--FAKSLYVVGGEQREHFVQMKAVLSLMGFDWAD- 356 Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------------------------E 416 +V + +G KMS R GD + L+ V+D + Sbjct: 357 DVEHISFGLITFNGK--KMSTRKGDVVLLKDVLDDAHDLALKQIQEKNPALKNKEVVAEQ 414 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQA--KDIFP 473 VG+ +V F L + DF+ + V+ + P YVQY AR +SI R+A I Sbjct: 415 VGAGAVVFHDLMNDRTNNFDFNLEEVVRFEGDTGP--YVQYTNARAKSILRKADVTKIGD 472 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 DL+ + D +I L +P ++ A +E +A Y LA F+ Sbjct: 473 DLNLN-------------DADTWDIITTLNAFPTAVQRAWQQREASIIAKYALTLARTFN 519 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++++ + + A++ +L RL LV +V +++ L ++GV+SP EM Sbjct: 520 KYYANSK-------ILADDAQLN-ARLALVESVTIVLSESLRLLGVKSPEEM 563 >gi|118497156|ref|YP_898206.1| arginyl-tRNA synthetase [Francisella tularensis subsp. novicida U112] gi|194323454|ref|ZP_03057231.1| arginyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE] gi|208778949|ref|ZP_03246295.1| arginyl-tRNA synthetase [Francisella novicida FTG] gi|254372523|ref|ZP_04988012.1| arginine-tRNA ligase [Francisella tularensis subsp. novicida GA99-3549] gi|254373984|ref|ZP_04989466.1| arginyl-tRNA synthetase [Francisella novicida GA99-3548] gi|166232788|sp|A0Q5D7|SYR_FRATN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|118423062|gb|ABK89452.1| arginyl-tRNA synthetase [Francisella novicida U112] gi|151570250|gb|EDN35904.1| arginine-tRNA ligase [Francisella novicida GA99-3549] gi|151571704|gb|EDN37358.1| arginyl-tRNA synthetase [Francisella novicida GA99-3548] gi|194322309|gb|EDX19790.1| arginyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE] gi|208744749|gb|EDZ91047.1| arginyl-tRNA synthetase [Francisella novicida FTG] Length = 581 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 146/630 (23%), Positives = 260/630 (41%), Gaps = 106/630 (16%) Query: 11 LKNYLKEIDCKIKVE---KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 ++NYL E K+ + + ++V D GH N AM L++ PL IAE Sbjct: 3 IENYLSETLAKVFQKLGYAESFAKVVTSTREDV--GHFQCNGAMPLAKFAKKPPLAIAEE 60 Query: 68 IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127 IV I + + +A GFIN+ L+P +L + + S ++G KV ++F Sbjct: 61 IVEHIDAEDIFAKLEVAKPGFINITLAPKFLADTTNRFLNSN-KFGVQNNLPNRKVVLDF 119 Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187 N PMHVGH R A++GD L + F G V + ++ D G Q+ L + + Q Sbjct: 120 GGPNVAKPMHVGHIRSALLGDALQRIHRFCGDTVVSDVHLGDWGTQMGMLIEEIKLQSPQ 179 Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKY------SSELLNFPEEKWLPIVK------- 234 +Y +++ G YP V +ELA+ Y +N E+ L + Sbjct: 180 LVYFDEN--YTGEYPTESPVTV-QELAEIYPRASKRCKSDINEMEKARLATFELQQGRRG 236 Query: 235 -----DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 + V+ + ++ D +L++ D+++ E D ++ I ++I ++YE Sbjct: 237 YVALWQHFVRISIDAVKKDFDSLDVHFDLWLGESDANKF----IDEMISYFQANNFIYE- 291 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL--LKSDGSYTYFAADLA-YFKCKYE 346 + D ++ D PL +K DG Y DLA ++ + Sbjct: 292 ------DEGAWVIDTNK------------DGVPPLIVIKKDGGVMYGTTDLATLWQRSKD 333 Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVA---AAVSEKKAQINVLLCELVRLY------RDGMP 397 D +IYV+ S + K++ +VA VSEK C+L + +DG P Sbjct: 334 LDPDEIIYVVDKRQSLHFKQVFSVAERTKVVSEK--------CKLKHVAFGTVNGKDGRP 385 Query: 398 IKMSK-----------RAGDFITLR-------HVVDEVGSDSVRFMMLWRKNSELLDFDF 439 K + +A ++ R ++D++ +++F L + FD Sbjct: 386 FKTREGGVMHLADLISQAKEYAKNRMPDENDDSIIDQIAMATIKFGDLINNYANDYFFDL 445 Query: 440 CK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRN--VIPQESEFDTSE 495 K + + K P Y+ Y R +SI R+ IF D D ++ V+ +E+ E Sbjct: 446 EKFAQHEGKTGP--YLLYTAVRAKSILRK---IFGDNYDIKSLAKDYKVVNAHNEY---E 497 Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555 +L + L ++P ++ A +P+ + Y Y LA+ F+ + + ++ L Sbjct: 498 EKLQLQLIQFPIAVQRAYENSQPHHICEYAYSLANSFNKFYVN------CPITNLDDESL 551 Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R+ L A + ++IG+ P M Sbjct: 552 KKARIALCMATVKAMTIASDLIGISIPERM 581 >gi|34762844|ref|ZP_00143829.1| Arginyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887500|gb|EAA24585.1| Arginyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 569 Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 137/582 (23%), Positives = 247/582 (42%), Gaps = 90/582 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AMI S+ +G +P IAE I V+ + +AG GFIN++LS Y I Sbjct: 39 GDYQCNFAMINSKIIGDNPRKIAEEIKNNFSCGDVVEKLEVAGPGFINIFLSDKY---IS 95 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 +SI G Y + + + KV I+F S N MH+GH R ++G+ + + F GY+V Sbjct: 96 NSIKKIGENYDFSFLNRKGKVIIDFSSPNIAKRMHIGHLRSTIIGEAVCRIYKFLGYDVV 155 Query: 163 REYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVGK-----ELADK 216 + +I D G Q L + W ++A N + E VY+K + L D Sbjct: 156 ADNHIGDWGTQFGKLIVGYRKWLNREAYEKNAIEELE----RVYVKFSDEAEKDPSLEDL 211 Query: 217 YSSEL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274 +EL + EE+ + K++ ++ +K K L++ D + E ++ ++ Sbjct: 212 ARAELKKVQDGEEENTKLWKEFITES-LKEYNKLYKRLDVHFDTYYGESFYNDMMGDVVK 270 Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334 +++D + D K LF + K DG+Y Y Sbjct: 271 ELVDKKI-----------AVDDDGAKVVFFDEKDNLFPCI---------VQKKDGAYLYS 310 Query: 335 AADLAYFKC-KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393 +D+A K K + MIY+ + + K+ + + + ++ ++R + Sbjct: 311 TSDIATVKFRKNTYDVNRMIYLTDARQQDHFKQFFKITDMLGWNIEKYHIWFG-IIR-FA 368 Query: 394 DGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMM 426 DG+ +S R G+ I L ++DE VG SV++ Sbjct: 369 DGI---LSTRKGNVIKLEELLDEAHSRAYDVVNEKNPNLSEEEKQNIAEVVGVSSVKYAD 425 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV-I 485 L + + F++ K+ + N Y+ Y YAR +SI R+ + DL+ +N+ I Sbjct: 426 LSQNKQSDIIFEWDKML-SFEGNTAPYLLYTYARIQSILRKVTEQNIDLN-----KNIEI 479 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 +++F+ S L +L +P + A +P +A YLY+L+ + +++ P L Sbjct: 480 KTDNKFEKS---LATYLLVFPISVLKAAETFKPNLIADYLYELSKKLNSFYNNC---PIL 533 Query: 546 RFVQANNRKLTMM--RLQLVHAVASIINSGLNIIGVESPNEM 585 N+ + + R L+ ++ GL ++G+ N+M Sbjct: 534 ------NQDIETLKSRALLIKKTGEVLKEGLGLLGIPVLNKM 569 >gi|296314056|ref|ZP_06863997.1| arginine--tRNA ligase [Neisseria polysaccharea ATCC 43768] gi|296839307|gb|EFH23245.1| arginine--tRNA ligase [Neisseria polysaccharea ATCC 43768] Length = 572 Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 123/589 (20%), Positives = 241/589 (40%), Gaps = 86/589 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEVLAGNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P +L + + + ++ +G K V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRPEFLARNIQT-ALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++AF G V R+ ++ D G Q L + + + +DL + Y Sbjct: 144 RVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203 Query: 212 ELADKYSSEL--LNFPEEKWLPIVKDY------SVQAMMKIIRDDLKALNIQHDIFISED 263 AD + L +E L + K + QA+ + L+ ++ + ++D Sbjct: 204 TFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLSLKLRPEDVAGESKYNDD 263 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDV 320 ++ ++D+L ++G E D +++F G+ Sbjct: 264 ---------LQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPA 299 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 + K G + Y + DLA + + R D ++YV+ + + ++L + Sbjct: 300 AFIVQKQGGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPE 359 Query: 380 QINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 + + +DG P K R+GD + L ++ E Sbjct: 360 DVKAEFIGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGTDEAG 417 Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VG +V++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 418 KIGKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG-- 474 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 ++D V+ + E QL L ++ V+++ P+ LA YLY +A++ Sbjct: 475 ----EWDATAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATL 525 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 F + P L+ A+ RLQL + GL+++G++ Sbjct: 526 FSRFY---EACPILKAEGASRNS----RLQLAKLTGDTLKQGLDLLGID 567 >gi|253577326|ref|ZP_04854644.1| arginyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] gi|251843330|gb|EES71360.1| arginyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] Length = 624 Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 161/673 (23%), Positives = 268/673 (39%), Gaps = 147/673 (21%) Query: 7 FSSRLKNYL----KEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 SS +K YL +++ ++ + L IVIERP HG STN AM L++ L PL Sbjct: 5 ISSWMKKYLELSVRQVLSRLGHSTEELPDIVIERPARAEHGDYSTNIAMQLAKTLRQPPL 64 Query: 63 TIAELIVARIKIDPDVDSVF----IAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLI 117 IA + ++ ++ +F A GF+N L + RK + R + Sbjct: 65 HIAAQLKNELEQTGRMEGLFHQIETAPPGFLNFRLDWNEWARK--------DFQLPRAV- 115 Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 KV IE S NP H+GH R A +GD+LA L+ +GY++ YI+D G Q+ Sbjct: 116 --REKVVIEHTSINPNKSAHIGHLRNACIGDSLARLLKRAGYQIEVHNYIDDLGNQLADT 173 Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS-----SELLNFPE--EKWL 230 + + QA + D Y V KE D+ S +++L E + L Sbjct: 174 VVGLLNVDHQAAHVRFGDFCWDIY-----SRVNKEYDDQPSLLEQRTKVLQALEAGDGNL 228 Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY--- 287 V + + +++ +++KA I +D+ + E + R D L +Q ++ Sbjct: 229 AWVGLLTAERIVREHLEEMKAFGIDYDLLVWESNIVR---QGFWDTAFRLLQQTALFHKE 285 Query: 288 -----EG--ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340 EG +L P ++ + + D+ L++S+G TY A D+AY Sbjct: 286 TSGKLEGCWVLKQPAAEDVE-------------SEAEHQADKVLVRSNGILTYTAKDIAY 332 Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400 K+ ++ Y +D + E VAA + +NV+ +R P M Sbjct: 333 HLWKFGLLGNDFRYKPFAD-GLWTTSAEGVAADYGKADLVVNVI------DHRQAYPQAM 385 Query: 401 SKRAGDFI-------TLRHV-----------VDEVGSDS----VRFMMLWR-----KNSE 433 K+A + + LRHV E+G D+ + M R K S+ Sbjct: 386 VKQALEALGFTAQAEKLRHVGYGVVSLSPGAARELGLDTSDGKASYAMSGRQGIGIKVSD 445 Query: 434 LLD----------------------------------------FDFCKVKEQSKENPVFY 453 LLD FD + E + N Y Sbjct: 446 LLDLMEAQIEAKRSDSEGLSSRLIAAAAIRYYLLRFALPTEVVFDIQQATETTG-NTGVY 504 Query: 454 VQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 + YA+AR SI +A+ D P ++ P ++ PQE +E L+ +A +P + A Sbjct: 505 LMYAHARAASILAKAQADGLPRMES--LPEDIAPQER----AEHALLRQIAAWPDTLSTA 558 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572 P + + Y+LA++F+ ++ P L+ + RL L I Sbjct: 559 CEELSPTPICHFAYELATLFNHFYT---ACPILK----AEPERQPYRLWLTAKFKETIAE 611 Query: 573 GLNIIGVESPNEM 585 L++IG+ +P+ M Sbjct: 612 ALDVIGLPAPDRM 624 >gi|331007404|ref|ZP_08330588.1| Arginyl-tRNA synthetase [gamma proteobacterium IMCC1989] gi|330418782|gb|EGG93264.1| Arginyl-tRNA synthetase [gamma proteobacterium IMCC1989] Length = 582 Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 139/605 (22%), Positives = 260/605 (42%), Gaps = 103/605 (17%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFI 89 + + G N AM ++ P IA+ IV +++ + DV + IAG GFI Sbjct: 28 VAASKKAGFGDYQANGAMGAAKIAKAKPRDIAQQIVDQLQQNSDVQVMISHIEIAGPGFI 87 Query: 90 NLYLSPSYLR---KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 NL L P +L +I++ GI+ + V +++ S N MHVGH R +++ Sbjct: 88 NLTLDPQWLAANIRIINQDKQLGIQDD-----QPQTVVVDYSSPNLAKEMHVGHLRSSII 142 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS--DLPEGYYPGV 204 GD + + F G+ V R+ ++ D G Q L + + Q+ + + DL EG+Y Sbjct: 143 GDAVVRTLEFQGHNVVRQNHVGDWGTQFGMLIAELEEQLQEGESASLALKDL-EGFY--- 198 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH-------- 256 + + K+ E F + +VK S A + + + + +++ H Sbjct: 199 -------QSSKKHFDESEAFANKARDYVVKLQSGDAHVLTLWEQFRRVSLTHSQEIYQQL 251 Query: 257 DIFISEDDFHRGDPSPIRD---IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313 ++ ++ DD RG+ + D ++ L +QG E Q++F Sbjct: 252 NVTLNADDV-RGESAYNDDLAPLVAELQQQGLAVES---------------QGAQVVFLE 295 Query: 314 TMVGDDVD-RPLL--KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEA 369 M + + P++ K G + Y DLA + + + D ++Y + + S +++++ Sbjct: 296 EMADKEGNPSPVIIQKQGGGFLYATTDLAALRYRSHTLHADRVLYFIDARQSLHMQQVFT 355 Query: 370 VAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416 +A I++ + DG P K R G + L ++ E Sbjct: 356 LAKKAGFVNDNISLEHHPFGTMMGADGKPFKT--RTGGTVKLADLLVEAVERAEKVVADK 413 Query: 417 ---------------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYAR 460 VG ++++ L + + F++ + + +P Y+QYAYAR Sbjct: 414 NPNLSAEERAVIARKVGIGAIKYADLSKTRTNDYIFNWETMLSFEGNTSP--YLQYAYAR 471 Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520 +SIFR+A D+D + E +E+ L + ++ V+E +T P+ Sbjct: 472 IQSIFRKA-----DIDVSALNSELALNEP----AEVALSIKTLQFAEVVEQSTREAYPHL 522 Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 L YLYDLA +F + + P L+ + K + RLQL +VA+ +N GL+++G+E Sbjct: 523 LCTYLYDLAGLFMRFY---EQCPILKDGIDEDTKNS--RLQLALSVANTLNKGLDLLGIE 577 Query: 581 SPNEM 585 + ++M Sbjct: 578 TMDKM 582 >gi|260776440|ref|ZP_05885335.1| arginyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450] gi|260607663|gb|EEX33928.1| arginyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450] Length = 577 Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 134/601 (22%), Positives = 236/601 (39%), Gaps = 118/601 (19%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG +P A+ ++ + +D IAG GFIN++LS +L K Sbjct: 37 GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 S +S G + T V ++ + N MHVGH R ++GD + + F G++V Sbjct: 97 ES-ALSDSRLGVAAEAQKTIV-ADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGYYPG 203 R +I D G Q L L F+R + LY+ D + Sbjct: 155 RANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEAFYRESKKLYDEDEEFAVKARNY 214 Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 V V + D+Y +E+ W +V +Q ++ Sbjct: 215 V----VKLQGGDEYCAEM-------WKKLVDVTMIQ---------------------NQR 242 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDV 320 ++ R + S R+ + + + GI+ K + + D D Q++F G+ + Sbjct: 243 NYDRLNVSLTRENVMGESMYNDMLPGIVADLKEQGLAQED-DGAQVVFLEEYKNKDGEPM 301 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAA 372 + K DG + Y D+A K +YE G D ++Y + S + V++ V Sbjct: 302 GVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGYVPE 361 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 V+ + ++L +DG P K RAG + L ++DE +++ ++ KN Sbjct: 362 EVTLEHHAFGMMLG------KDGRPFKT--RAGGTVRLADLLDEAEERAIK--LIESKNP 411 Query: 433 EL-----------LDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRSI 464 +L + K + SK N Y+QYAY R SI Sbjct: 412 DLETAEKQNIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVASI 471 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 F +A +L D+ I +E E LI L ++ +++ +P+ + Y Sbjct: 472 FAKAGISMDELAGDI----QITEE-----KEKSLIAKLLQFEEAVQSVAREGQPHIMCSY 522 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 L++LA F + + + + RL+L A I GL+++G+++ Sbjct: 523 LFELAGQFSSFYEA------CPILNTEDESVKQSRLKLAALTAKTIKQGLSLLGIDTLER 576 Query: 585 M 585 M Sbjct: 577 M 577 >gi|218768489|ref|YP_002343001.1| arginyl-tRNA synthetase [Neisseria meningitidis Z2491] gi|23822208|sp|Q9JTM7|SYR_NEIMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|121052497|emb|CAM08836.1| arginyl-tRNA synthetase [Neisseria meningitidis Z2491] Length = 572 Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 125/588 (21%), Positives = 240/588 (40%), Gaps = 84/588 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEALADNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P +L + + + ++ +G K V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRPEFLAQNIQT-ALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++AF G V R+ ++ D G Q L + + + +DL + Y Sbjct: 144 RVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203 Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 AD + L +E L + K D S+ + D L ++ + E ++ Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323 ++ ++D+L ++G E D +++F G+ Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 + K G + Y + DLA +Y G D ++YV+ + + ++L + Sbjct: 303 VQKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPEN 360 Query: 381 INVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 + + +DG P K R+GD + L ++ E Sbjct: 361 VGAAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERAAALVKEKNPELGADEAAK 418 Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 VG +V++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 419 IGKTVGIGAVKYADLSKNRTSNYVFDWDAMLS-FEGNTAPYLQYAYTRVQSVFRKAG--- 474 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 ++D V+ + E QL L ++ V+++ P+ LA YLY +A++F Sbjct: 475 ---EWDATAPTVLSE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLF 526 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + P L+ A+ RLQL + GL+++G++ Sbjct: 527 SRFY---EACPILKAESASRNS----RLQLAKLTGDTLKQGLDLLGID 567 >gi|116618315|ref|YP_818686.1| arginyl-tRNA synthetase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|122271485|sp|Q03WV9|SYR_LEUMM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|116097162|gb|ABJ62313.1| arginyl-tRNA synthetase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 563 Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 141/594 (23%), Positives = 245/594 (41%), Gaps = 99/594 (16%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +E P+ G ++ L++ L P IA IVA ID + +A ++N +L Sbjct: 27 LEAPKSSDLGDVAF-PTFTLAKTLHKAPQLIAADIVA--AIDQEGFEKVVATGPYVNFFL 83 Query: 94 SP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 + ++L ++ YG N+ G+G KV I+ S N PM +GH R V+G+ LA+ Sbjct: 84 DKVATSNQVLKTVFDLEGAYGDNVDGQGAKVTIDMSSPNIAKPMSMGHLRSTVIGNALAN 143 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 + A +GY + ++ D G Q L + W ++ + ++ YY V K Sbjct: 144 ITAKNGYAPVKINHLGDWGTQFGKLIYAYKAWGSEEEVKSDPIATLLKYY--VEFHEKAK 201 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQA----------MMKIIRDDLKALNIQHDIFIS 261 E ++ LN W ++D +A +K + L+I D F Sbjct: 202 E------NDSLNDEGRAWFKKLEDGDEEAHRLWQWFRAESLKEFSEIYDRLDITFDSFNG 255 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E ++ + ++D L + + E S+ Q D+ M+ Sbjct: 256 EAFYN----DKMDKVVDLLEEKNLLVE-------SQGAQIVDLSHINPNLTPAMIK---- 300 Query: 322 RPLLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EK 377 +SDG+ Y DLA Y K Y+ F +YV+G + + +++AV + + E Sbjct: 301 ----RSDGATLYMTRDLAAALYRKETYD--FAKSLYVVGGEQREHFVQMKAVLSLMGFEW 354 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD---------------------- 415 I + L+ +G KMS R GD + L+ V+D Sbjct: 355 SDDIEHIAFGLITF--NGK--KMSTRKGDVVLLKDVLDDAHELALKQIQEKNPDLGDKDT 410 Query: 416 ---EVGSDSVRFMMLWRKNSELLDFDFCKV-KEQSKENPVFYVQYAYARCRSIFRQAKDI 471 EVG+ +V F L + DF+ +V + + P YVQY AR +SI R+ Sbjct: 411 VAEEVGAGAVVFHDLMNDRTNNFDFNLEEVVRFEGDTGP--YVQYTNARAKSILRKTSVQ 468 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 D +L D + +I L +P+ ++ A +E +A Y +L+ Sbjct: 469 LTSDDLNLT-----------DPATWDIITTLNNFPKTVQRAWQQREASIIAKYALNLSRA 517 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ ++++ + VQ N RL LV +V+ ++ L ++GV++P EM Sbjct: 518 FNKYYANSK--ILTEDVQLN------ARLVLVKSVSIVLTESLRLLGVKAPEEM 563 >gi|311029544|ref|ZP_07707634.1| arginyl-tRNA synthetase [Bacillus sp. m3-13] Length = 561 Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 146/601 (24%), Positives = 258/601 (42%), Gaps = 103/601 (17%) Query: 29 LDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK 86 LD+I ++E+P+ HG LS + PL A+ I +++ + ++ G Sbjct: 20 LDKITQLLEKPKHAQHGDLSFPCFELAKMKRTAPPLLAAD-IATQLR-NAMIEKTEAVGP 77 Query: 87 GFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 ++N++ +++ + I++ E YG + + ++ S N P +GH R V Sbjct: 78 -YVNIFFRKDMIQQKVVYIILKEKENYGTIHLKNKETIVLDLSSPNIAKPFSMGHLRSTV 136 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGV 204 +G+ +A+++ SG+E R Y+ D G Q L A + W ++ + N +PE Sbjct: 137 IGNAIANILEKSGFETVRINYLGDWGTQFGKLIAAYLKWGKEEKIRRN--PIPE------ 188 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFIS 261 LK K + + LN +W +++ + +A + K R++ LK N + + Sbjct: 189 LLKLYVKFHEEAAVNTDLNDEGRRWFKQLEEGNEEAVSLWKWFREESLKEFNKIYALLGV 248 Query: 262 EDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 D ++G+ + ++ L Q + E S Q ++D L Sbjct: 249 TFDSYQGEAFYNDKMDQVVQMLEEQDLLKE-------SDGAQVVELDDPSL--------- 292 Query: 319 DVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRL-EAVAA 372 P L KSDG+ Y DLA Y K Y+ F +YV+G + S + +++ E + Sbjct: 293 ---PPCLIKKSDGATLYATRDLAAALYRKKVYQ--FSKALYVVGQEQSIHFQQVKEVLKK 347 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------- 416 A + A+++ + L L +DG KMS R G + L V+ E Sbjct: 348 ANFDWAAEMHHIPFGL--LLKDGK--KMSTRKGKVVLLEEVLKEAIQLAERNIESKNPDL 403 Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSI 464 VG +V F L KN + +F +K + + P YVQY YAR SI Sbjct: 404 PDKEEVARQVGVGAVIFHDL--KNYRVNSVEFSLEDMLKFEGETGP--YVQYTYARANSI 459 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 ++ K +D L D +L L EYP VI N+ +A +P +A + Sbjct: 460 LKKGKWTGEVIDKGL-----------GDNYSWELTKLLQEYPEVIANSNMAYDPSLVAKH 508 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 + D+ F+ + + ++F++ + K RL LV A A +I L ++G+++P E Sbjct: 509 IVDVCQAFNSWYGN------VKFLEEDAEK--GARLALVSATAIVIKESLRLLGIQAPQE 560 Query: 585 M 585 M Sbjct: 561 M 561 >gi|254786912|ref|YP_003074341.1| arginyl-tRNA synthetase [Teredinibacter turnerae T7901] gi|259511658|sp|C5BNG6|SYR_TERTT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|237687266|gb|ACR14530.1| arginine--tRNA ligase [Teredinibacter turnerae T7901] Length = 578 Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 140/586 (23%), Positives = 246/586 (41%), Gaps = 121/586 (20%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A+ IV + + + V IAG GFIN++L ++L + L+ S + Sbjct: 54 NPRELAQSIVDSLDLSGVAEKVEIAGPGFINIHLENAWLARQLAE-SSSTANLAAQTEQE 112 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 V +++ S N MHVGH R ++GD LA ++ F+G +V R+ ++ D G Q L Sbjct: 113 AQTVVVDYSSPNLAKEMHVGHLRSTIIGDCLARILEFNGDKVIRQNHVGDWGTQFGMLIA 172 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI-VKDYSV 238 + ++ L +G P L K+L Y +F + +DY V Sbjct: 173 EL-----------ETQLSDGDKPDFAL----KDLESFYQKAKAHFDTDAAFATKARDYVV 217 Query: 239 ------QAMMKIIRDDLKALNIQH--------DIFISEDDFHRGDPSPIRD---IIDNLA 281 Q ++ + + K ++++H ++ + D RG+ + D ++ L Sbjct: 218 RLQSGDQHILNLW-ESFKRVSLKHSEEIYSLLNVTLGPQDV-RGESAYNDDLAAVVSELK 275 Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLL--KSDGSYTYFAADL 338 QG E D Q++F + + D P++ K DG Y Y DL Sbjct: 276 AQGLAVED---------------DGAQVVFLQELADKNGDPSPVIVQKKDGGYLYSTTDL 320 Query: 339 AYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR---- 393 A + + E D ++Y + + S +++++ VA +KA + E V L Sbjct: 321 AALRYRTGELAADRILYFIDARQSLHMQQVFTVA-----RKAN---FVNEWVSLEHHPFG 372 Query: 394 -----DGMPIKMSKRAGDFITLRHVVDE--------------------------VGSDSV 422 DG P K R+G + L +++E VG ++ Sbjct: 373 TMMGADGKPFKT--RSGGTVKLAELLEEAVERASQVVAANSELDAQEAADIARKVGIGAI 430 Query: 423 RFMML--WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 ++ L R N + ++D + + P Y+QYAY R +SIFR+A DLD + F Sbjct: 431 KYADLSKTRTNDYVFNWD-AMLSFEGNTGP--YLQYAYTRIKSIFRKA-----DLDLESF 482 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 ++ + ++ E L + ++ V+E P+ L YLYDL+S+F + Sbjct: 483 AADL----NIYEAQEKALALKTLQFAEVVEQVASEALPHVLCNYLYDLSSLFMTFY---E 535 Query: 541 ENPRLRF-VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P L+ V + R RL L +VA + GL+++G+E M Sbjct: 536 ACPILKSDVPEDTRN---SRLVLSASVAKTLALGLDLLGIEVMERM 578 >gi|313668110|ref|YP_004048394.1| arginyl-tRNA synthetase [Neisseria lactamica ST-640] gi|313005572|emb|CBN87008.1| arginyl-tRNA synthetase [Neisseria lactamica 020-06] Length = 572 Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 125/592 (21%), Positives = 244/592 (41%), Gaps = 92/592 (15%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEALAGNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P +L + + + ++ +G + K V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRPEFLARNIQT-ALNDARFGVSKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++AF G V R+ ++ D G Q L + + + +DL + Y Sbjct: 144 RVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203 Query: 212 ELADKYSSEL--LNFPEEKWLPIVKDY------SVQAMMKIIRDDLKALNIQHDIFISED 263 AD + L +E L + K + QA+ + L+ ++ + ++D Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYNTLGLKLRPEDVAGESKYNDD 263 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDV 320 ++ ++D+L ++G E D +++F G+ Sbjct: 264 ---------LQAVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPA 299 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVS---- 375 + K G + Y + DLA + + R D ++YV+ + + ++L + Sbjct: 300 AFIVQKQGGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPE 359 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416 + KA+ + + +DG P K R+GD + L ++ E Sbjct: 360 DAKAE---FIGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGAD 414 Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG +V++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 415 EAAKIGKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKA 473 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 +D V+ + E QL L ++ V+++ P+ LA YLY + Sbjct: 474 G------KWDATAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQI 522 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 A++F + P L+ A RLQL + GL+++G++ Sbjct: 523 ATLFSRFY---EACPILKSEGATRNS----RLQLAKLTGDTLKQGLDLLGID 567 >gi|238062127|ref|ZP_04606836.1| arginyl-tRNA synthetase [Micromonospora sp. ATCC 39149] gi|237883938|gb|EEP72766.1| arginyl-tRNA synthetase [Micromonospora sp. ATCC 39149] Length = 572 Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 147/604 (24%), Positives = 238/604 (39%), Gaps = 115/604 (19%) Query: 38 RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 R H ++AA+ L+R LG P IA I+ + ++ +V ++G GFINL ++ Sbjct: 28 RRSQHADYQSDAALSLARRLGRPPRDIATEILGQAELADLCSAVEVSGPGFINLTVADPA 87 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 L +LS + V G + V +++ + N MHVGH R V+GD L+ + Sbjct: 88 LGALLSPMAVDA-RLGVAVSAAPQTVVVDYSAPNVAKEMHVGHLRSTVIGDAAVRLLEWL 146 Query: 158 GYEVTREYYINDAGAQINTL--------------ALSV-----FWRYQQALYNNDSDLPE 198 G+ V + ++ D G L LSV F++ + ++ D E Sbjct: 147 GHRVIKANHLGDWGTPFGMLIEHLLDLGESEAAHELSVGDLDSFYKAARVKFDADDAFKE 206 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 V G EL + LL EK+ V D Q + Sbjct: 207 RARRRVVALQGGDELTLRL-WRLLVAESEKYFLTVYD-------------------QLGV 246 Query: 259 FISEDDFHRGDP------SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312 ++E DF+ G+ +P+ D +D L G+L + C +F Sbjct: 247 LLTEQDFY-GESYYNDMLAPVTDELDRL--------GLL---RDSGDAAC-------VFP 287 Query: 313 STMVGDDVDRPL----LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRL 367 G D +PL K DG Y Y A DLA + + G ++YV+G + + + Sbjct: 288 EGFTGRD-GQPLPIIVRKRDGGYGYGATDLAAIRHRTRNLGATRLLYVVGLPQRQHFEMV 346 Query: 368 EAVA--------AAVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFIT--------- 409 AVA AV+E ++L + L R G IK+ + +T Sbjct: 347 YAVARQAGWLSPPAVAEHIGFGSILGSDGKMLRSRAGGSIKLVGLLDEAVTRAAELARQK 406 Query: 410 --------LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461 + V VG ++++ L + FD+ ++ N Y+QYA+AR Sbjct: 407 NPDLPEAAIADVARAVGIGAIKYADLSTDRIKDYVFDWQRMLSLDG-NTAPYLQYAHARI 465 Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 RSIFR+A + S +E L + L + V+ E ++L Sbjct: 466 RSIFRRAG----------LGQITAASISIAHPAEHALALELVNFGTVVTGVEQTLEFHRL 515 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 A YL+ LA+ F G + H P LR ++ RL L A I++ GL ++G+ + Sbjct: 516 AGYLHTLAATFSGFYEH---CPVLR----AEGEVRASRLALCDLTARILHRGLYLLGIAT 568 Query: 582 PNEM 585 P M Sbjct: 569 PERM 572 >gi|239942144|ref|ZP_04694081.1| arginyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998] gi|239988607|ref|ZP_04709271.1| arginyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379] gi|291445591|ref|ZP_06584981.1| arginyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998] gi|291348538|gb|EFE75442.1| arginyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998] Length = 590 Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 139/593 (23%), Positives = 238/593 (40%), Gaps = 99/593 (16%) Query: 47 TNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIV 106 N + L++ L +P +A + A + + + ++G GF+N+ L+ R I+ ++ Sbjct: 43 ANGILALAKKLKGNPRELAGQVTAALPAGELIKGIEVSGPGFLNITLTD---RAIVETLA 99 Query: 107 VSGIE----YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + G + K I++ N MHVGH R AV+GD + ++ F+G +V Sbjct: 100 ARAADDEGRLGVPVAADAGKTVIDYAQPNVAKEMHVGHLRSAVIGDAMVRILEFTGEDVV 159 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222 R ++I D G Q L + + AL ++ D +G L V K S L Sbjct: 160 RRHHIGDWGTQFGML-IQYLIEHPGAL-KHEGDASDGEAAMSTLNRVYKA-----SRALF 212 Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED-----------DFHRGDP- 270 + EE K S ++ + D + L + F+ E D DP Sbjct: 213 DSDEE-----FKARSRDRVVALQAGDRETLELWQG-FVDESKIYFHSVFDKLDMEVRDPD 266 Query: 271 ----SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLL 325 S D+++ R IL +T + +F + G D ++ PL+ Sbjct: 267 IVGESGYNDMLEETCR-------IL----EETGVAVRSEGALCVFFDDVKGPDGNKVPLI 315 Query: 326 --KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 K++G Y Y A DL+ + + + D ++YV+ + S + K + A + Sbjct: 316 VKKTNGGYGYAATDLSAIRNRVQDLKADTLLYVVDARQSLHFKMVFETARRAGWLNEDVK 375 Query: 383 -VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------- 416 V L L +DG P K R G+ + L ++DE Sbjct: 376 AVQLAFGTVLGKDGKPFKT--REGETVRLEDLLDEAVDRATAVVREKAEKVGLSEDEIVG 433 Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 VG +V++ L FD ++ + + V Y+QYAYAR +SI R+A D Sbjct: 434 NGRYVGIGAVKYADLSTSAVRDYKFDLDQMVSLNGDTSV-YLQYAYARIQSILRKAGDAV 492 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 P +L + P +E L +HL ++ V+ EP+KLA YLY LAS Sbjct: 493 PAAHPEL---TLAP-------AERALGLHLDQFGEVLAEVAAGYEPHKLAAYLYQLASHL 542 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + N ++ RL LV A ++ G+ ++G+ +P + Sbjct: 543 TTFYDQCQ-----VLSPDNAPEVVENRLFLVELTARTLHQGMALLGIRTPERL 590 >gi|325136599|gb|EGC59200.1| arginyl-tRNA synthetase [Neisseria meningitidis M0579] Length = 572 Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 125/588 (21%), Positives = 240/588 (40%), Gaps = 84/588 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P +L + + + ++ +G K V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRPEFLAQNIQT-ALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++AF G V R+ ++ D G Q L + + + +DL + Y Sbjct: 144 RVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203 Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 AD + L +E L + K D S+ + D L ++ + E ++ Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDMAGESKYN 261 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323 ++ ++D+L ++G E D +++F G+ Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 + K G + Y + DLA +Y G D ++YV+ + + ++L + Sbjct: 303 VQKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPEN 360 Query: 381 INVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 + + +DG P K R+GD + L ++ E Sbjct: 361 VGAAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERAAALVKEKNPELGADEAAK 418 Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 VG +V++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 419 IGKTVGIGAVKYADLSKNRTSNYVFDWDAMLS-FEGNTAPYLQYAYTRVQSVFRKAG--- 474 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 ++D V+ + E QL L ++ V+++ P+ LA YLY +A++F Sbjct: 475 ---EWDATAPTVLSE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLF 526 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + P L+ A+ RLQL + GL+++G++ Sbjct: 527 SRFY---EACPILKAESASRNS----RLQLAKLTGDTLKQGLDLLGID 567 >gi|330444190|ref|YP_004377176.1| arginyl-tRNA synthetase [Chlamydophila pecorum E58] gi|328807300|gb|AEB41473.1| arginyl-tRNA synthetase [Chlamydophila pecorum E58] Length = 564 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 146/580 (25%), Positives = 233/580 (40%), Gaps = 99/580 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH N AM L+R L P +IAE IV+ + DS+ IAG GFIN S +L + L Sbjct: 39 GHYQCNDAMKLARVLKQAPRSIAEAIVSHLPHKEFFDSIEIAGAGFINFTFSSKFLTERL 98 Query: 103 ---SSIVVSG--IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 SS + SG +E+ +N++ I+F S N MHVGH R ++G+ LA ++++ Sbjct: 99 NSFSSTLASGLRVEHPQNIV-------IDFSSPNIAKDMHVGHLRSTIIGECLARILSYV 151 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217 G V R +I D G L + ++A +N DL E Y K K A+ Sbjct: 152 GNSVLRLNHIGDWGTAFGMLIAFIEESPEEANLDNLKDLTELY------KRAHKRFAE-- 203 Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDI 276 EE + K + Q ++ + + +AL + I ISE F + I DI Sbjct: 204 --------EEAF----KKRAQQRVVALQAQEPQALALWKKICEISEKAFQQ-----IYDI 246 Query: 277 ID-NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV------GDDVDRPLLKSDG 329 +D L ++G E P + Q D++ K L+ S G + + KSDG Sbjct: 247 LDITLEKRG---ESFYNPFLPEVIQ--DLESKHLITLSDKAKCVFHEGFSIPFMVQKSDG 301 Query: 330 SYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 Y Y DLA + + E + +I V S + + LEA A A + + Sbjct: 302 GYNYATTDLAAMRYRVEHDHAEKIIIVTDLGQSLHFQLLEATAIAAGYLHPGMFSHVG-- 359 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDS 421 L D K R+G+ I L+ ++D +G ++ Sbjct: 360 FGLVLDAEGKKFKTRSGENIKLQELLDTAIEKAREALLSHRPEVTETELEELAPIIGINA 419 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 +++ L F F K+ + N ++ YAY R + I R+ L Sbjct: 420 IKYADLSSHRVSDYIFSFEKML-RFDGNTAMFLLYAYVRIQGIKRR---------LHLQE 469 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 ++ S D +E L + L +P ++ P+ L YLY L F Sbjct: 470 LSLSGPLSLQDPAEEALALSLLRFPEALQLTIKELCPHFLTEYLYTLTQKF--------- 520 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 N R L RL L ++ +G++++G+ + Sbjct: 521 NRFFRDCHIEGSPLESERLTLCALTEKVLATGMHLLGLRT 560 >gi|328676625|gb|AEB27495.1| Arginyl-tRNA synthetase [Francisella cf. novicida Fx1] Length = 581 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 146/630 (23%), Positives = 260/630 (41%), Gaps = 106/630 (16%) Query: 11 LKNYLKEIDCKIKVE---KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 ++NYL E K+ + + ++V D GH N AM L++ PL IAE Sbjct: 3 IENYLSETLAKVFQKLGYAESFAKVVTSTREDV--GHFQCNGAMPLAKFAKKPPLAIAEE 60 Query: 68 IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127 IV I + + +A GFIN+ L+P +L + + S ++G KV ++F Sbjct: 61 IVEHIDAEDIFAKLEVAKPGFINITLAPKFLADTTNRFLNSN-KFGVQNNLPNRKVVLDF 119 Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187 N PMHVGH R A++GD L + F G V + ++ D G Q+ L + + Q Sbjct: 120 GGPNVAKPMHVGHIRSALLGDALQRIHRFCGDTVVSDVHLGDWGTQMGMLIEEIKLQSPQ 179 Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKY------SSELLNFPEEKWLPIVK------- 234 +Y +++ G YP V +ELA+ Y +N E+ L + Sbjct: 180 LVYFDEN--YTGEYPTESPVTV-QELAEIYPRASKRCKSDINEMEKARLATFELQQGRRG 236 Query: 235 -----DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 + V+ + ++ D +L++ D+++ E D ++ I ++I ++YE Sbjct: 237 YVALWQHFVRISIDAVKKDFDSLDVHFDLWLGESDANKF----IDEMISYFQANNFIYE- 291 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL--LKSDGSYTYFAADLA-YFKCKYE 346 + D ++ D PL +K DG Y DLA ++ + Sbjct: 292 ------DEGAWVIDTNK------------DGVPPLIVIKKDGGVMYGTTDLATLWQRSKD 333 Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVA---AAVSEKKAQINVLLCELVRLY------RDGMP 397 D +IYV+ S + K++ +VA VSEK C+L + +DG P Sbjct: 334 LDPDEIIYVVDKRQSLHFKQVFSVAERTKVVSEK--------CKLKHVAFGTVNGKDGRP 385 Query: 398 IKMSK-----------RAGDFITLR-------HVVDEVGSDSVRFMMLWRKNSELLDFDF 439 K + +A ++ R ++D++ +++F L + FD Sbjct: 386 FKTREGGVMHLADLISQAKEYAKNRMPDENDDSIIDQIAMATIKFGDLINNYANDYFFDL 445 Query: 440 CK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRN--VIPQESEFDTSE 495 K + + K P Y+ Y R +SI R+ IF D D ++ V+ +E+ E Sbjct: 446 EKFAQHEGKTGP--YLLYTAVRAKSILRK---IFGDNYDIKSLAKDYKVVNAHNEY---E 497 Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555 +L + L ++P ++ A +P+ + Y Y LA+ F+ + + ++ L Sbjct: 498 EKLQLQLIQFPIAVQRAYENSQPHHICEYAYSLANSFNKFYVN------CPITNLDDESL 551 Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R+ L A + ++IG+ P M Sbjct: 552 KKARIALCMATVKSMTIASDLIGISIPERM 581 >gi|328957660|ref|YP_004375046.1| arginine--tRNA ligase [Carnobacterium sp. 17-4] gi|328673984|gb|AEB30030.1| arginine--tRNA ligase [Carnobacterium sp. 17-4] Length = 564 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 148/601 (24%), Positives = 255/601 (42%), Gaps = 111/601 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P+ HG ++ A L++ P IA + + P V+ + + G ++N + Sbjct: 27 LLENPKSAEHGDIAF-PAFALAKAFRKAPQQIATDLGETVN-SPIVEKIEVVGP-YLNFF 83 Query: 93 LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+ + +L I+ G YG IG V I+ S N P+ +GH R V+G++LA Sbjct: 84 LNKKEVSSAVLKEILEKGPHYGDAEIGGNRNVPIDMSSPNIAKPISMGHLRSTVIGNSLA 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +++ G+ + ++ D G Q L + W ++A+ N+ P V L Sbjct: 144 NILTKVGFNPIKINHLGDWGTQFGKLIVGYKLWGSEEAVKND---------PIVELLR-- 192 Query: 211 KELADKYSSELLNFPE-----EKWLPIVK--DYSVQAMMKIIRDD-LKALN-------IQ 255 L K+ E PE +W ++ D Q + K R++ LK N I Sbjct: 193 --LYVKFHEEAEEKPELDDEAREWFKKLEDGDQEAQRLWKWFREESLKEFNHVYERLDIT 250 Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315 D F E F+ + D+++ + +L T D+++ L Sbjct: 251 FDSFDGE-AFYNDKMQEVMDLLEE--------KNVLSVNDGATI--VDLEKYNL------ 293 Query: 316 VGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 P L KSDG+ Y DLA Y K Y+ F +Y +G++ S + K+L+AV Sbjct: 294 ------NPALIKKSDGATLYITRDLAAAIYRKRTYD--FAMSLYAVGNEQSHHFKQLKAV 345 Query: 371 -----------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407 +S +K +I VLL E++ ++ ++ D Sbjct: 346 LKEMGYDWADDMHHIPFGLITQGGKKLSTRKGKI-VLLEEVLDDAVASALEQIEEKNTDL 404 Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSI 464 + D+VG +V F L KN L +FDF V+ + + P YVQY AR SI Sbjct: 405 PNKEIIADQVGIGAVVFHDL--KNDRLNNFDFTIEEVVRFEGETGP--YVQYTRARAMSI 460 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R++ D D +P + D ++I L YP ++ A EP +A + Sbjct: 461 IRKSGIAGIDTTAD-YPLD--------DAYSWEIIKLLESYPDDVQRAYEKFEPSVIAKH 511 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 LA F+ ++++ + V A++ + RL LV +VA+I+ L ++GV++P++ Sbjct: 512 AIHLAQAFNKYYANSK-------VLADDAQ-KPARLALVQSVATILKEDLRLLGVQAPDQ 563 Query: 585 M 585 M Sbjct: 564 M 564 >gi|154484785|ref|ZP_02027233.1| hypothetical protein EUBVEN_02503 [Eubacterium ventriosum ATCC 27560] gi|149734633|gb|EDM50550.1| hypothetical protein EUBVEN_02503 [Eubacterium ventriosum ATCC 27560] Length = 588 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 141/611 (23%), Positives = 258/611 (42%), Gaps = 94/611 (15%) Query: 25 EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84 +KK+ +V RP C + N AM ++ P+ IA +V ++ + +SV Sbjct: 22 DKKLGKVVVSNRPDLCQY---QCNGAMAGAKLYHKAPIMIANQVVESLQDNEMFESVEAV 78 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 GFIN+ L+ ++ K L+ + + +YG T V I++ AN P+HVGH R A Sbjct: 79 MPGFINIKLNSEFVAKYLNDMKEAD-KYGCENKAPETIV-IDYGGANVAKPLHVGHLRSA 136 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-------DLP 197 V+G+++ + F G +V + ++ D G Q+ + + R +Y ++S + P Sbjct: 137 VIGESVKRIERFMGNKVISDVHLGDWGLQMGLIITELECRKPDLVYFDESYTGEYPEEAP 196 Query: 198 ------EGYYPGVYLK-HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250 E YP K V +E +K L + + P + + +MK+ +DLK Sbjct: 197 FTISELEEIYPCASAKSKVDEEFKEKAHQATLKL-QSGYAPYTAIW--KHIMKVSVEDLK 253 Query: 251 A----LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 LN+ D++ E D P I+D+ID + Y +G L SK D Sbjct: 254 KNYGNLNVDFDLWKGESDAQPYIPGLIQDLIDK--KLAYESQGALVVDISKED-----DT 306 Query: 307 KQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD----- 359 K+L P + KSDG+ Y +DLA + E+ + Y+ +D Sbjct: 307 KEL------------PPCIVRKSDGAALYATSDLATI-IQREQDYKPNHYIYVADKRQEL 353 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H V R+ A V E L +DG P K R G + L +++ ++ Sbjct: 354 HFTQVFRVSKKANIVDENTKM--EFLGFGTMNGKDGKPFKT--RDGGVMRLENLIAQINK 409 Query: 420 DSVRFMMLWRKNSE-----------LLDFDFCKVKEQSKENPVF--------------YV 454 +M R SE L + + Q+ ++ +F Y+ Sbjct: 410 AVYDKIMENRTVSEEEANNTAKIVGLAALKYGDLSNQASKDYIFDIDRFASFEGNTGPYI 469 Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514 Y R +SI + K + D +L P + + S++QL++ +A++ +IENA Sbjct: 470 LYTIVRIKSILEKYKAESGNADVNL------PVINTDNGSQMQLMLEVAKFNEIIENAAE 523 Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 P+K+ Y+YDL++ F+ + + + ++ + L++ +++ + Sbjct: 524 ELAPHKICSYVYDLSNAFNRFYH------ETKILAEEDQTKKAGYIALINLTINVLEQCI 577 Query: 575 NIIGVESPNEM 585 +++G +P+ M Sbjct: 578 DLLGFSAPDRM 588 >gi|182437971|ref|YP_001825690.1| arginyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC 13350] gi|238688989|sp|B1VTB7|SYR_STRGG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|178466487|dbj|BAG21007.1| putative arginyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 594 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 142/595 (23%), Positives = 235/595 (39%), Gaps = 95/595 (15%) Query: 45 LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104 N + L++ L +P +A + A + + + ++G GF+N+ L+ + + L++ Sbjct: 41 FQANGILALAKKLKGNPRELAAQVTAALPAGGLIKDIEVSGPGFLNVTLTDRAIVETLAA 100 Query: 105 IVVSG-IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR 163 G G L I++ N MHVGH R AV+GD + ++ F+G V R Sbjct: 101 RAADGEGRLGVPLKDDAGTTVIDYAQPNVAKEMHVGHLRSAVIGDAVVRILEFTGENVVR 160 Query: 164 EYYINDAGAQINTLALSVFWRYQQALYNNDS---DLPEGYYPGVYLKHVGKELADKYSSE 220 ++I D G Q L + + AL + +G L V KE S Sbjct: 161 RHHIGDWGTQFGML-IQYLIEHPGALQHEGGPGDGASDGEAAMSTLNRVYKE-----SRA 214 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED-----------DFHRGD 269 L + EE K S ++ + D L + H F+ E D D Sbjct: 215 LFDSDEE-----FKARSRDRVVALQAGDPGTLELWHR-FVDESKIYFHSVFDKLDMEIRD 268 Query: 270 P-----SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-P 323 P S D+++ R IL +T + +F + G D +R P Sbjct: 269 PDIVGESGYNDMLEETCR-------IL----EETGVAVRSEGALCVFFDDVKGPDGNRVP 317 Query: 324 LL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 L+ K++G Y Y A DL+ + + + D ++YV+ + S + + + A Sbjct: 318 LIVKKTNGGYGYAATDLSAVRNRVQDLKADTLLYVVDARQSLHFRMVFETARRAGWLGDD 377 Query: 381 IN-VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 + V L L +DG P K R G+ + L ++DE Sbjct: 378 VKAVQLAFGTVLGKDGKPFKT--REGETVRLEDLLDEAVQRATAVVRDKAEKVGLSEEEI 435 Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 VG +V++ L FD ++ + V Y+QYAYAR RSI R+A D Sbjct: 436 VENGRYVGIGAVKYADLSTSAVRDYKFDLDQMVALHGDTSV-YLQYAYARIRSILRKAGD 494 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 P E E +E L +HL ++ V+ EP+KLA YLY LAS Sbjct: 495 AVP----------AAHPELELAPAERALGLHLDQFGEVLAEVGTGYEPHKLAAYLYQLAS 544 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H + + ++ N ++ RL LV A ++ G+ ++G+ +P + Sbjct: 545 ----HLTTFYDQCQV-LSPDNAPEVVENRLFLVELTARTLHRGMALLGIRTPERL 594 >gi|304413606|ref|ZP_07395050.1| arginyl-tRNA synthetase [Candidatus Regiella insecticola LSR1] gi|304283697|gb|EFL92091.1| arginyl-tRNA synthetase [Candidatus Regiella insecticola LSR1] Length = 576 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 132/593 (22%), Positives = 229/593 (38%), Gaps = 103/593 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G NA M +++ L + P +A+ IV R+ + + IAG GFIN++L +L + Sbjct: 37 GDYQANAVMSVAKMLNIPPRQLADKIVQRLDLAGIAQKIEIAGPGFINIFLDRQWLATQV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 I+ + G + T V I++ + N MHVGH R ++GD A + G+ V Sbjct: 97 DHIL-KAPKLGLTSVIPQTIV-IDYSAPNIAKEMHVGHLRSTIIGDATARTLTLLGHNVI 154 Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204 R ++ D G Q L L F+R + Y+ D++ + V Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMQRENADDMALSDLEKFYRAAKKNYDEDNEFAQHARAYV 214 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 G E +L++ E+ S Q + H ED Sbjct: 215 VKLQAGDEHCRSMWRKLVDITMEQ-----NQLSYQRL--------------HVTLTKEDI 255 Query: 265 FHRGDPSP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS---TMVGDDV 320 +P + II +L +G E + ++F G+ + Sbjct: 256 MGESLYNPMLPGIITDLKTKGLAVES---------------NGATVVFVGEYKNKKGEPM 300 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEK 377 + K DG Y Y D+A K +Y+ G D ++Y S ++ ++ +A A + Sbjct: 301 GVIVQKEDGGYLYATTDIACAKYRYQTLGADRILYYTDSRQHQHLTQIWQIARQAGYVPE 360 Query: 378 KAQINVLLCELVRLYRDGMPIKMS---------------KRAGDFI----------TLRH 412 + + ++ L +DG P K +RAG I L+ Sbjct: 361 SMPLEHHMFGMM-LGKDGKPFKSRTGENIKLADLLDEAIERAGKLIREKNPDISPQELKQ 419 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 + D VG ++++ L + + FD+ + N Y+QYAY R SIF++A Sbjct: 420 IADAVGIGALKYADLSKNRTTDYIFDWDNMLT-FDGNTAPYIQYAYTRIISIFKRAA--- 475 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 +D + VI E E L L ++ +I P+ + YLY+LA +F Sbjct: 476 --IDEEHLNLPVIITEDR----EAALTTSLLQFEEIITTVARDGTPHVMCSYLYNLAVLF 529 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + H + A N + RL+L A + GL+++G+++ +M Sbjct: 530 SSFYEH------CPILNAGNEQTCQSRLKLALLTAKTLKQGLDVLGIQTVEKM 576 >gi|269967949|ref|ZP_06181989.1| Arginyl-tRNA synthetase [Vibrio alginolyticus 40B] gi|269827472|gb|EEZ81766.1| Arginyl-tRNA synthetase [Vibrio alginolyticus 40B] Length = 577 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 135/611 (22%), Positives = 231/611 (37%), Gaps = 138/611 (22%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG +P A+ ++ + +D IAG GFIN++LS +L K Sbjct: 37 GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96 Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 + + G+ + + ++ + N MHVGH R ++GD + + F G+ Sbjct: 97 EAALADSRLGV-----AADEAQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGH 151 Query: 160 EVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGY 200 +V R +I D G Q L L F+R + LY+ D D Sbjct: 152 KVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLYDEDEDFAVKA 211 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALN 253 V G D+Y +E+ W +V +Q + + RDD+ + Sbjct: 212 RNYVVKLQSG----DEYCAEM-------WKKLVDVTMIQNQRNYDRLNVSLTRDDVMGES 260 Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR- 312 + +D+ P I+ +L QG E D Q++F Sbjct: 261 MYNDML----------PK----IVADLKEQGLAVED---------------DGAQVVFLD 291 Query: 313 --STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY------ 363 G+ + + K DG + Y D+A K +YE D ++Y + S + Sbjct: 292 EYKNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYEELSADRVLYFIDSRQHQHLMQAWT 351 Query: 364 -VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 V++ V +VS + ++L +DG P K RAG + L ++DE + Sbjct: 352 IVRKAGYVPESVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRAA 403 Query: 423 RFMMLWRKNSEL-----------LDFDFCKVKEQSKE-----------------NPVFYV 454 + ++ KN EL + K + SK N Y+ Sbjct: 404 Q--LIESKNPELDAEEKEKISKTVAMAAVKYSDLSKHRTTDYVFDWDNMLAFEGNTAPYM 461 Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514 QYAY R SIF +A L D+ D E LI L ++ +++ Sbjct: 462 QYAYTRVASIFAKAGVAMDALQGDI---------KITDEKEKALIAKLMQFEEAVQSVAR 512 Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 +P+ + YL++LA F + + A + + RL+L A I GL Sbjct: 513 EGQPHIMCSYLFELAGQFSSFYEA------CPILVAEDEAVKQSRLKLAALTAKTIKQGL 566 Query: 575 NIIGVESPNEM 585 +++G+++ M Sbjct: 567 SLLGIDTLERM 577 >gi|166365931|ref|YP_001658204.1| arginyl-tRNA synthetase [Microcystis aeruginosa NIES-843] gi|189083539|sp|B0JLI8|SYR_MICAN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|166088304|dbj|BAG03012.1| arginyl-tRNA-synthetase [Microcystis aeruginosa NIES-843] Length = 585 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 144/583 (24%), Positives = 241/583 (41%), Gaps = 89/583 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N ++ L++ L P +A ++ ++ID + IAG GFINL L PSYL L Sbjct: 40 GDYQCNISLSLAKELKQKPREVAATLLKNLEIDDLCQTPEIAGPGFINLTLKPSYLETQL 99 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 ++ G K+ ++F S N MHVGH R ++GD +A ++ F ++V Sbjct: 100 KDLITDN-RLGVATANPSQKIIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFRHHQVI 158 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222 R ++ D G Q L + Y AL D+ L G Y K A E Sbjct: 159 RLNHVGDWGTQFGMLITYLQEAYPSALTQADA-LDLGDLVSFYKK------AKIRFDEDE 211 Query: 223 NFPEEKWLPIVKDYS--------VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP--SP 272 NF E +VK S Q + + R + + + DI ++E RG+ +P Sbjct: 212 NFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILDIKLTE----RGESFYNP 267 Query: 273 -IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + +I L +QG + E G L T K G+ + + KSDG Sbjct: 268 YLEAVIRELDQQGLLTEDNGALCVFLDGFTNK--------------EGEPLPLIVKKSDG 313 Query: 330 SYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387 Y Y DLA ++ + ++ + +IYV + + + ++ VA + V+ Sbjct: 314 GYNYATTDLAAICYRVREDKA-ERIIYVTDAGQANHFAQVFQVAKKAGFLPDNVAVVHVA 372 Query: 388 L-VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM---MLWRKNSELLDF------ 437 + L DG K+ R+G+ + L+ ++D+ + S+ + + + E DF Sbjct: 373 FGLVLGEDGK--KLKTRSGETVKLQELLDQAIACSLADLEKRLASEEREETGDFIAKTAE 430 Query: 438 -------DFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLD 476 + + + N VF Y+ YAYAR +SI R+ F DL Sbjct: 431 TVGLSAVKYADLSQNRHSNYVFSYDKMLNLQGNTAPYMLYAYARVQSISREGGINFQDLS 490 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 + ++I + D SEL L L + P VI P +L YLY+L+ ++ + Sbjct: 491 AN---SSLILK----DESELILAKQLLQLPEVISAVEEDLLPNRLCDYLYELSKKYNRFY 543 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 + P L+ + + RL L A + GL+++G+ Sbjct: 544 ENC---PVLKAAEP----IKTSRLFLCDLTARTLKLGLSLLGI 579 >gi|91228441|ref|ZP_01262366.1| arginyl-tRNA synthetase [Vibrio alginolyticus 12G01] gi|91188025|gb|EAS74332.1| arginyl-tRNA synthetase [Vibrio alginolyticus 12G01] Length = 577 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 135/611 (22%), Positives = 231/611 (37%), Gaps = 138/611 (22%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG +P A+ ++ + +D IAG GFIN++LS +L K Sbjct: 37 GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96 Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 + + G+ + + ++ + N MHVGH R ++GD + + F G+ Sbjct: 97 EAALADSRLGV-----AADEAQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGH 151 Query: 160 EVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGY 200 +V R +I D G Q L L F+R + LY+ D D Sbjct: 152 KVIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLYDEDEDFAVKA 211 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALN 253 V G D+Y +E+ W +V +Q + + RDD+ + Sbjct: 212 RNYVVKLQSG----DEYCAEM-------WKKLVDVTMIQNQRNYDRLNVSLTRDDVMGES 260 Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR- 312 + +D+ P I+ +L QG E D Q++F Sbjct: 261 MYNDML----------PK----IVADLKEQGLAVED---------------DGAQVVFLD 291 Query: 313 --STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY------ 363 G+ + + K DG + Y D+A K +YE D ++Y + S + Sbjct: 292 EYKNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYEELSADRVLYFIDSRQHQHLMQAWT 351 Query: 364 -VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 V++ V +VS + ++L +DG P K RAG + L ++DE + Sbjct: 352 IVRKAGYVPESVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRAA 403 Query: 423 RFMMLWRKNSEL-----------LDFDFCKVKEQSKE-----------------NPVFYV 454 + ++ KN EL + K + SK N Y+ Sbjct: 404 Q--LIESKNPELDAEEKEKISKTVAMAAVKYSDLSKHRTTDYVFDWDNMLAFEGNTAPYM 461 Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514 QYAY R SIF +A L D+ D E LI L ++ +++ Sbjct: 462 QYAYTRVASIFAKAGVAMDALQGDI---------KITDEKEKALIAKLMQFEEAVQSVAR 512 Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 +P+ + YL++LA F + + A + + RL+L A I GL Sbjct: 513 EGQPHIMCSYLFELAGQFSSFYE------ACPILVAEDEAVKQSRLKLAALTAKTIKQGL 566 Query: 575 NIIGVESPNEM 585 +++G+++ M Sbjct: 567 SLLGIDTLERM 577 >gi|125719041|ref|YP_001036174.1| arginyl-tRNA synthetase [Streptococcus sanguinis SK36] gi|125498958|gb|ABN45624.1| Arginyl-tRNA synthetase, putative [Streptococcus sanguinis SK36] Length = 562 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 144/600 (24%), Positives = 247/600 (41%), Gaps = 110/600 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E+P+ G ++ A L++ P IA I I D V G ++N + Sbjct: 26 LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIAADIAENIDT-AHFDKVVATGP-YVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 LS + + +++ ++ G +YG+ G G V I+ S N P VGH R V+GD+L+ Sbjct: 83 LSKAEISGQVIKEVIKDGADYGQQNEGNGENVTIDLSSPNIAKPFSVGHLRSTVIGDSLS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY + ++ D G Q L ++ W Q+A+ N P +Y++ + Sbjct: 143 NIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKWGSQEAVEAN----PIDELLKLYVR-IN 197 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 E+ + S L+ W ++D +A + + RD+ L N +++ E D Sbjct: 198 AEIENDPS---LDDEGRLWFKKLEDGDPEATELWQWFRDESLMEFNRIYELLGVEFDSLN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323 G+ + + I L +G + E SK D+ +D + P Sbjct: 255 GEAFYNDKMDEGIQILEDKGLLQE-------SKGASIVDL-------------EDFNLPP 294 Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374 + KSDG+ Y D+A Y Y F +YV+G + + + ++L+AV + Sbjct: 295 AMIKKSDGATLYITRDIATAIYRARTY--NFVKNVYVVGQEQANHFRQLKAVLKKMGFDW 352 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 S+ ++ L R K+S R G+ I L + E Sbjct: 353 SDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLLEAISRAKSQIEAKNPDLEN 405 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG +V+F L DFD V + + P Y+QYAYAR +SI R+A Sbjct: 406 KEAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQSILRKA 463 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 F + S D ++I L ++ RV++ A EP +A Y L Sbjct: 464 N----------FQPDAEATYSLNDPESWEIIKLLQDFGRVVKRAADNYEPSLIAKYAISL 513 Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A F+ +++H R E+P RL L ++ A ++ L ++GVE+P +M Sbjct: 514 AQAFNKYYAHTRILDESPERD-----------SRLALSYSTAVVLKEALRLLGVEAPEKM 562 >gi|72160673|ref|YP_288330.1| arginyl-tRNA synthetase [Thermobifida fusca YX] gi|109895049|sp|Q47TB0|SYR_THEFY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|71914405|gb|AAZ54307.1| arginyl-tRNA synthetase [Thermobifida fusca YX] Length = 576 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 142/586 (24%), Positives = 232/586 (39%), Gaps = 93/586 (15%) Query: 45 LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104 N A+ L++ L P +A I + I V I+G GFINL L ++ + Sbjct: 39 FQANVALALAKRLRRSPRDVATAITEHLDISDVCSKVEISGPGFINLTLRDDWIAHQVHD 98 Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164 ++ E + + + I++ + N MHVGH R VVGD LA ++ F G+ V R+ Sbjct: 99 LLTD--ERLGTPVQESQNIPIDYSAPNVAKEMHVGHLRTTVVGDALARILEFLGHHVIRQ 156 Query: 165 YYINDAGAQINTLALSVFW----RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 +I D G L + + A +D P +Y K E Sbjct: 157 NHIGDWGTPFGMLIEHLLEVGEDSAEAAQLKSD---PNAFYQAARAKFDSDE-------- 205 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN------IQHDIFISEDDFHRGDPSPIR 274 +F + +V S A + DL L+ I + ++ D H S Sbjct: 206 --DFADRARRRVVALQSGDAETLRLWRDLIELSKIYFNRIYRKLDVTLTDAHLAGESTYN 263 Query: 275 DII----DNLARQGY--VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-DDVDRPLL-- 325 D++ D LA +G V +G L C +F G + PL+ Sbjct: 264 DMLGPVCDELAEKGLAVVSDGAL----------C-------VFLEGFTGREGKPVPLIIR 306 Query: 326 KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA------AAVSEKK 378 KSDG Y Y DLA K + E+ D +IYV+G+ S +++ + A Sbjct: 307 KSDGGYGYATTDLATIKYRVEQLKADRIIYVVGAPQSLHLRMVYETARQAGWLGNAEPIH 366 Query: 379 AQINVLLCELVRLY--RDGMPIKMS-------KRAGDFI----------TLRHVVDEVGS 419 QI +L ++ R G P+++ +RA + T + +VG Sbjct: 367 VQIGNVLGSDGKILRTRSGAPVRLMALLDEAVERASAVVAQTRPDLDEETRAAIARDVGI 426 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 +V++ L + FDF ++ + N Y+QYA AR RSIFR+ + Sbjct: 427 GAVKYADLSIAHDTEYVFDFDRMLALNG-NTGPYLQYAVARIRSIFRKGG---------I 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 P V + +E L + L ++ + EP++L YL+DLA F + Sbjct: 477 DPAQVTGPIQVTEPAERALALKLLDFGATVVQVGDTLEPHRLCTYLFDLAQTFTAFYE-- 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P L+ A+ ++ RL L + GL+++GV +P +M Sbjct: 535 -ACPVLK---ADRDEVRNSRLALTAVTLHTLVKGLDLLGVRAPEQM 576 >gi|328950287|ref|YP_004367622.1| Arginyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884] gi|328450611|gb|AEB11512.1| Arginyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884] Length = 608 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 158/649 (24%), Positives = 269/649 (41%), Gaps = 112/649 (17%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D S+L+ + + + VE + +V E P D G T A L+R L P IA Sbjct: 3 DVKSQLRTSVLQALQALGVEDPP-EVVVQETPPDKP-GDYGTPIAFQLARALRKPPPAIA 60 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 + + + V F G G++N L P++L + ++ + + KV + Sbjct: 61 AQLAEHLPLPQGVARAFAVG-GYLNFELEPAHLIRAAAAPL-------EPFPKRPGKVLV 112 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 E S NP +HVGH R +GD ++ ++ F+G EV YI+D G Q+ A S+F Sbjct: 113 EHTSVNPNKELHVGHLRNICLGDAISRILRFAGREVEVLNYIDDTGRQV---AESLFALE 169 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM-KI 244 L + + + + Y++ + +ELAD + L ++ L ++ ++ + KI Sbjct: 170 HYGLTYDGTQKYDHWVGAAYVR-LHQELADPEAKARLEPRIQEVLHRLEAGELRDEVDKI 228 Query: 245 IRDDLKA---LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL----PPPKSK 297 +R L+ L ++D+ + E D + R+G++ + + P S+ Sbjct: 229 VRAQLETMHRLGAEYDVLVWESD---------------IVREGFLAKAMALLEQTPYVSR 273 Query: 298 TTQKCDMDRKQLLFRSTMVG-DDVDRPLLKSDGSYTYFAADLA--YFKCKYERGFDNMIY 354 TQ + + + G +D L++S+G+ TY A D+A ++K +G Y Sbjct: 274 PTQGKYAGALVIDVSAFLPGLEDPYLVLIRSNGTATYTAKDIAFQFWKMGLFKGLKFRPY 333 Query: 355 VM-GSDHSGYVKRLEAVAAAVSEKKAQINVLLCE------LVR--LYRDGMP-------- 397 S + Y E A K INV+ +VR L +G P Sbjct: 334 AQEPSGKTLYTSAPEGEAMPFGGAKETINVIDVRQSHPQAVVRASLEVEGRPDLAARAYH 393 Query: 398 ----------IKMSKRAGDFITLRHVVDE-------------------------VGSDSV 422 +S R G +++ V+DE VG +V Sbjct: 394 LAYETVLLEGKPLSGRKGHTVSVDEVLDEAVRRARAIIAEKNPEHPDPNRAAEVVGIGAV 453 Query: 423 RFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDI-FPDLDFDLF 480 RF M+ + + +DF + + + P YVQYA+AR SI R+A + D D D Sbjct: 454 RFAMVKTEPKKQIDFRWEQALSFEGDSGP--YVQYAHARADSILRKAAEAGLTDADAD-- 509 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL----ASVFHGHW 536 P P E+QL L +P +++A + P+ LA YL DL + ++ Sbjct: 510 PTMATP-------YEVQLAKVLLRFPEAVQDAAEQKTPHILAQYLLDLAAAWNAYYNAKT 562 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 GR P +QA L RL+LV + + +GL ++G+ +P M Sbjct: 563 PEGR--PATPVLQAPE-GLRGARLKLVRQLRDTLRTGLELLGITAPEVM 608 >gi|300723081|ref|YP_003712379.1| arginine tRNA synthetase [Xenorhabdus nematophila ATCC 19061] gi|297629596|emb|CBJ90199.1| arginine tRNA synthetase [Xenorhabdus nematophila ATCC 19061] Length = 576 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 130/581 (22%), Positives = 240/581 (41%), Gaps = 79/581 (13%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ +G+ P +AE +V + + + IAG GFIN++L ++ L Sbjct: 37 GDYQANGVMAAAKKVGMPPRQLAEKVVGLLDLQGIASKIEIAGPGFINIFLDKDWIATHL 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + + + G + + T V I++ + N MH+GH R ++GD A + F G+ V Sbjct: 97 ET-ALKDKKLGISPVNPQTIV-IDYSAPNVAKQMHIGHIRSTIIGDAAARTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND------SDLPEGYYPGVYLKHVGKELADK 216 R ++ D G Q L Y + + N + +DL E Y +E A + Sbjct: 155 RANHLGDWGTQFGMLIA-----YLEKVQNENASDMALADLEEFYREAKKTYDEDEEFAIR 209 Query: 217 YSSELLNFP-EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR----GDPS 271 S ++ +++ + V M ++ LN+ ++E D D Sbjct: 210 ARSYVVRLQGGDEYCRTMWRKLVDITMSQNQETYNRLNVT----LTEKDMMGESLYNDML 265 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 P D++ +L ++G E T D + + G+ + + K DG Y Sbjct: 266 P--DVVADLKQKGLAVE-----SDGATVVYLDEYKNK-------EGEPMGVIIQKKDGGY 311 Query: 332 TYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINV 383 Y D+A K ++E D ++Y + S + V++ + ++S + + Sbjct: 312 LYTTTDIACAKYRHEVLHADRVLYYIDSRQHQHLMQAWTIVRKAGYIPESLSLEHHMFGM 371 Query: 384 LLCELVRLY--RDGMPIKMS-------KRAGDFI----------TLRHVVDEVGSDSVRF 424 +L + + + R G +K+S +RA I L+ V++ VG +V++ Sbjct: 372 MLGKDGKPFKTRAGGTVKLSDLLDEAIERADTLIREKNPDMPEDELKKVIEAVGIGAVKY 431 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 L + + FD+ + + N Y+QYAY R SIF++A ++D + V Sbjct: 432 ADLSKSRTTDYVFDWDNML-AFEGNTAPYMQYAYTRVNSIFKRA-----EIDESSLTQPV 485 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 I E E L L ++ I P+ + YLYDLA +F G + H Sbjct: 486 ILNEGR----EQTLATRLLQFEETITTVAREGTPHVMCSYLYDLAGLFSGFYEH------ 535 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A++ ++ RL+L A + GL +G+++ M Sbjct: 536 CPILNADSEEIRQSRLKLALLTAKTLKQGLETLGIQTVERM 576 >gi|293608014|ref|ZP_06690317.1| predicted protein [Acinetobacter sp. SH024] gi|292828587|gb|EFF86949.1| predicted protein [Acinetobacter sp. SH024] Length = 594 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 136/584 (23%), Positives = 243/584 (41%), Gaps = 88/584 (15%) Query: 48 NAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVV 107 N + +++ L +P +A +V + I P+ +V ++G GFINL LS L + +S + Sbjct: 53 NGVLQVAKSLRKNPFDLATTVVNHLLISPEFSNVSVSGPGFINLKLSDEMLNRS-ASKQL 111 Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167 +L+ + I+F N P+HVGH R ++G+++ + A GY + + ++ Sbjct: 112 EDPNLNVSLVNNKRCILIDFGGPNVAKPLHVGHLRSLIIGESVRRIFAIQGYNIISDLHL 171 Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227 D G Q+ L + RY L D P + L + S N PE Sbjct: 172 GDWGLQMGMLISEIEIRYPN-LRCFDELNPSLSIDSLKCIEELDSLYPEASKACQNDPER 230 Query: 228 KWLPIVKDYSVQA-------MMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSP 272 ++QA + + +R D++ LN D+F+ E D P Sbjct: 231 MQFARKVTAALQAGHVGYRLLWEKLRSISLSKQLKDMELLNAHFDLFLGESDVQPLIP-- 288 Query: 273 IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSD 328 ++I +L +G E G L S+ T K M PL+ KSD Sbjct: 289 --EMIQSLRSKGIAKESQGALIIDVSEETDKKPMP-----------------PLILEKSD 329 Query: 329 GSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRL-EAVAAAVSEKKAQINVLLC 386 GS Y DLA +Y + ++++YV+ S + +++ AV A K ++ + Sbjct: 330 GSALYATTDLATVLDRYIKFQPESILYVVDQRQSLHFEQVFRAVRVADYAKSTKLIHIGF 389 Query: 387 ELVR-------LYRDGMPIKMS-------KRAGDFITLRH---------VVDEVGSDSVR 423 V RDG ++S ++A I LR + +VG +++ Sbjct: 390 GTVNGVDGKPYKTRDGGVARLSDLLEEAIQKAKSRIALRSETTGEESELLARKVGLAAIK 449 Query: 424 FMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDI-FPDLDFDLFP 481 F L FD + V + + P YVQYA R SI ++A++ + D ++ Sbjct: 450 FADLDSHRQSGYIFDAERLVSFEGRTGP--YVQYACVRISSILKKAEEYGWSKGDINI-- 505 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + +E +L++ A +P I + + P ++ Y+++LA VFH + Sbjct: 506 ---------IEPAERELVIECARFPDYILSVSSTYAPNEITNYVFNLAQVFHRFYKE--- 553 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ANN ++ R+ L ++++ GL ++G+E P M Sbjct: 554 ---CSVMNANNDEIRSSRISLCMLAHAVLSRGLWLLGIEVPTRM 594 >gi|302528902|ref|ZP_07281244.1| arginyl-tRNA synthetase [Streptomyces sp. AA4] gi|302437797|gb|EFL09613.1| arginyl-tRNA synthetase [Streptomyces sp. AA4] Length = 572 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 154/592 (26%), Positives = 241/592 (40%), Gaps = 119/592 (20%) Query: 48 NAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVV 107 N AM L + LG P +A IV +++D D IAG GF+N L +L + ++ Sbjct: 46 NLAMSLGKRLGKPPREVAAGIVENLELDGVADRPEIAGPGFLNFVLRREWLEQRVAEQAR 105 Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167 G + +V +++ S N MHVGH R V+GD ++ L+ G+EV ++ Sbjct: 106 DD-RLGVPETEQPRRVALDYSSPNVAKEMHVGHLRSTVLGDAISRLLRVVGHEVLPHNHL 164 Query: 168 NDAGAQINTLA-------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214 D G L L+ F YQ A D+D E + + V + Sbjct: 165 GDWGTPFGMLIEHHLDEPSGDRSDLNAF--YQAARRKFDAD--EAFATRSRERVVKLQSG 220 Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP--SP 272 D + L F W +V D S + R Q I +++DD + G+ +P Sbjct: 221 DP---DTLAF----WQELV-DESTRHFNAAYR--------QLGITLTDDDIY-GESFYNP 263 Query: 273 -IRDIIDNLARQGY--VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLL--K 326 + +++D L G + +G + C +F + DR PL+ K Sbjct: 264 YLGEVVDELEADGLTEISDGAV----------C-------VFPEGFANREGDRLPLIVRK 306 Query: 327 SDGSYTYFAADLAYFK-CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 DG Y Y A DLA + ERG +++YV+G+ + + + AVA A ++ + Sbjct: 307 RDGGYGYAATDLATIRYWTAERGATDLLYVVGTPQAQHFAMIFAVARAA----GWLDGVH 362 Query: 386 CELVR----LYRDGMPIKMSKRAGDFITL--------------------------RHVVD 415 E + L DG M RAG+ I L R V Sbjct: 363 AEHIGFGSILGADGK--VMRTRAGETIKLANLLDEAVAQAAEVVAERSELSEEEQREVAR 420 Query: 416 EVGSDSVRFMMLW--RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +V++ L R+ + D+D K+ N Y+QYA+AR SI +A + Sbjct: 421 AVGIGAVKYADLSSDRERDYVFDWDRMLAKDG---NTSVYLQYAHARIESILAKAGETD- 476 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 D P V+ QE +E L + L + I AT A P+KL YLYD A F Sbjct: 477 ----DNAP--VVLQEP----AERALALTLLRFSEAISAATSAYAPHKLCTYLYDTAVTF- 525 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R + + A +L R+QL + + GL ++G+E+P + Sbjct: 526 -----SRFYEQCPVLTAETPELRASRVQLAKLTSRTLVQGLALLGIEAPRRL 572 >gi|291230340|ref|XP_002735133.1| PREDICTED: Arginyl-tRNA synthetase-like [Saccoglossus kowalevskii] Length = 666 Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 144/584 (24%), Positives = 251/584 (42%), Gaps = 75/584 (12%) Query: 43 GHLSTNAAMILSRPL-GL----DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S+ L GL P IAE IV + ++ V IAG GFIN++L+ S+ Sbjct: 117 GEYQCNSAMGISQQLKGLGIKKSPREIAETIVKGLPPSEMIEKVEIAGPGFINIHLTKSF 176 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + L+ ++V G+ IG+ +V ++ S N MHVGH R ++GD+++ L F Sbjct: 177 VSHKLNELLVIGVRPPP--IGRKKRVVVDMSSPNIAKEMHVGHLRSTIIGDSISRLYEFL 234 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215 G++V R +I D G Q L + ++ + + DL + +Y ++ +E Sbjct: 235 GHDVLRLNHIGDWGTQFGMLIAHLMDKFPNYVAESPPIGDL-QDFYKESKIRFDNEEEFK 293 Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275 K + L+ + K I K +++ + + R + + + + DI I E RG+ S +D Sbjct: 294 KRAYSLVVKLQAKEPDITKAWNL--ICDVSRREFQKIYDRLDIKIVE----RGE-SFYQD 346 Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335 ++ + R ++K + D RK + + G DV ++KSDG TY Sbjct: 347 MMGDTVR----------ALEAKGVVEVDDGRKVVF----VPGHDVPLTVVKSDGGNTYDT 392 Query: 336 ADLAYFKCKYERGFD------------------NMIYVMGSDHSGY---VKRLEAVAAAV 374 +D+A + R FD N+I+ G Y R+E + V Sbjct: 393 SDMAAL---HHRLFDEHADVILYVVDAGQGLHFNLIFAAGKLVGWYDPSSTRVEHIGFGV 449 Query: 375 --SEKKAQINVLLCELVRL---YRDGMPIKMSK----RAGDFIT---LRHVVDEVGSDSV 422 E K + E +RL +G+ + K + +T L+ + V + Sbjct: 450 VLGEDKKKFKTRSGETIRLADLLEEGLKRSLQKLKDKNRHEILTAEELKAAQESVAYGCI 509 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 ++ L F F K+ + K N Y+ YA+ R RSI R A ++D D + Sbjct: 510 KYSDLSHNRVNDYVFSFDKMLD-DKGNTAAYLLYAFTRIRSIARLA-----NIDRDTLKK 563 Query: 483 NVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + D E +L L P ++ + L YLY++++ F + H Sbjct: 564 AAETTAVDLDHPKEWKLGKCLLRLPDILLRVLDDLCMHTLCDYLYEISTTFTEFYDHCYC 623 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R + K+ M RL L A A+++ G +I+G+ +M Sbjct: 624 VEKDRQTK-EIIKVNMSRLLLCEATANVMECGFSILGINPVEKM 666 >gi|145639894|ref|ZP_01795494.1| arginyl-tRNA synthetase [Haemophilus influenzae PittII] gi|145270985|gb|EDK10902.1| arginyl-tRNA synthetase [Haemophilus influenzae PittII] Length = 581 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 135/594 (22%), Positives = 225/594 (37%), Gaps = 112/594 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LGL+P A+ ++ ++ + + IAG GFIN++L+P++L + Sbjct: 37 GDYQANGIMAAAKKLGLNPREFAQKVLDNAQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 S+ +S G K T V I++ S N MHVGH R ++GD +A + F G+ V Sbjct: 97 SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204 R ++ D G Q L L F+R + Y+ D E V Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMQHEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYV 214 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 V + D+Y + W +V Q R L + D+ + E Sbjct: 215 ----VKLQSGDEYCRTM-------WKRLVDITMQQNQYNYAR--LNVTLTEKDV-MGESL 260 Query: 265 FHRGDPSPIRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322 ++ PS ++D L +QG E G L + K GD + Sbjct: 261 YNPMLPSIVKD----LKKQGLAVENDGALVVYLYEFKNKD--------------GDPMGV 302 Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY--------VKRLEAVAAAV 374 + K DG + Y D+A K +YE N V ++ V + Sbjct: 303 IVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQAWLITRKAGYVPDSF 362 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 S + ++L +DG P K R G + L ++DE Sbjct: 363 SLEHKNFGMMLG------KDGKPFKT--RTGGTVKLADLLDEAIERATVLINEKNTNLSN 414 Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467 VG +V++ L + + FD+ + + N Y+QYAY R RSIF + Sbjct: 415 DEKESVIEAVGIGAVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNK 473 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 D + P + D E L + L ++ ++ P+ L YLY+ Sbjct: 474 T-------DINSTALLAAPLTIK-DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYE 525 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 LA +F + H + A + + + RL+L + GL ++G+++ Sbjct: 526 LAGIFSSFYEH------CPILNAEDEAVKLSRLKLALLTEKTLKQGLTLLGIKT 573 >gi|257081952|ref|ZP_05576313.1| arginyl-tRNA synthetase [Enterococcus faecalis E1Sol] gi|256989982|gb|EEU77284.1| arginyl-tRNA synthetase [Enterococcus faecalis E1Sol] Length = 563 Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 139/603 (23%), Positives = 258/603 (42%), Gaps = 98/603 (16%) Query: 25 EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82 E+ +D+I ++E P+ HG ++ A L++ P IA + +I + + + Sbjct: 17 EELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRKAPQQIASELAEKID-GTNFEKIE 74 Query: 83 IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 + G ++N +++ + + ++ +V YG + G V I+ S N P+ +GH Sbjct: 75 VVGP-YLNFFMNKEAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMSSPNIAKPISMGHL 133 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGY 200 R V+G+++A ++ GY+ R ++ D G Q L ++ W ++A+ P Sbjct: 134 RSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEEAVRQQ----PINE 189 Query: 201 YPGVYLK-HVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDD-LKALNIQH 256 +Y++ H E K E W ++ D + K R + LK + + Sbjct: 190 LLRLYVQFHEEAEEKPKLEDEA-----RAWFKKLEEGDQEANELWKWFRSESLKEFDKIY 244 Query: 257 DIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313 + E D + G+ + +I+ L + + E ++ + D+ L Sbjct: 245 SMLEVEFDSYNGEAFYNDKMDEIVTLLEEKHLLTE-------NQGAEIVDLTEYNL---- 293 Query: 314 TMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLE 368 P L KSDG+ Y DLA Y K Y+ F +YV+G++ S + K+L+ Sbjct: 294 --------NPALIRKSDGATLYITRDLAAALYRKRTYD--FAKSLYVVGNEQSNHFKQLK 343 Query: 369 AV-----------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405 AV +S +K +I VLL E++ +++++ Sbjct: 344 AVLKELGFDWSDDMEHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAVTLAGNQINEKNP 402 Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCR 462 D V +VG +V F L KN L +FDF V+ + + P YVQY +AR Sbjct: 403 DLANREEVAKQVGVGAVIFHDL--KNDRLNNFDFVLDEVVRFEGETGP--YVQYTHARAM 458 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 SI R+A F + + + D +++ L ++P + A EP +A Sbjct: 459 SILRKAN----------FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEKYEPSVIA 508 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 + LA F+ +++H +R + + +K RL LV+AVA+++ L ++G+ +P Sbjct: 509 KHSIHLAQAFNKYYAH------VRILDEDAQK--EARLALVYAVATVLKEDLRLLGLHAP 560 Query: 583 NEM 585 EM Sbjct: 561 EEM 563 >gi|308389652|gb|ADO31972.1| arginyl-tRNA synthetase [Neisseria meningitidis alpha710] gi|325208446|gb|ADZ03898.1| arginyl-tRNA synthetase [Neisseria meningitidis NZ-05/33] Length = 572 Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 125/588 (21%), Positives = 240/588 (40%), Gaps = 84/588 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P +L + + + ++ +G K V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRPEFLAQNIQT-ALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++AF G V R+ ++ D G Q L + + + +DL + Y Sbjct: 144 RVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203 Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 AD + L +E L + K D S+ + D L ++ + E ++ Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323 ++ ++D+L ++G E D +++F G+ Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 + K G + Y + DLA +Y G D ++YV+ + + ++L + Sbjct: 303 VQKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPEN 360 Query: 381 INVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 + + +DG P K R+GD + L ++ E Sbjct: 361 VGAAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERAAALVKEKNPELGADEAAK 418 Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 VG +V++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 419 IGKTVGIGAVKYADLSKNRTSNYVFDWDAMLS-FEGNTAPYLQYAYTRVQSVFRKAG--- 474 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 ++D V+ + E QL L ++ V+++ P+ LA YLY +A++F Sbjct: 475 ---EWDATAPTVLSE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLF 526 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + P L+ A+ RLQL + GL+++G++ Sbjct: 527 SRFY---EACPILKAESASRNS----RLQLAKLTGDTLKQGLDLLGID 567 >gi|327467950|gb|EGF13440.1| arginine--tRNA ligase [Streptococcus sanguinis SK330] Length = 562 Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 142/600 (23%), Positives = 246/600 (41%), Gaps = 110/600 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E+P+ G ++ A L++ P IA I +I D V G ++N + Sbjct: 26 LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIAADIAEKIDT-AHFDKVVATGP-YVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 LS + + +++ ++ G +YG+ G + I+ S N P VGH R V+GD L+ Sbjct: 83 LSKAEISGQVIKEVIKDGADYGQQSEGNNQNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY + ++ D G Q L ++ W Q+A+ N P +Y++ + Sbjct: 143 NIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKWGSQEAVEAN----PIDELLKLYVR-IN 197 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 E+ + S L+ W ++D +A + + RD+ L N +++ E D Sbjct: 198 AEIENDPS---LDEEGRLWFKKLEDGDQEATELWQWFRDESLTEFNRIYELLGVEFDSLN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323 G+ + + I L +G + E SK D++ D + P Sbjct: 255 GEAFYNDKMDEGIQILEEKGLLQE-------SKGASIVDLE-------------DFNLPP 294 Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374 + KSDG+ Y D+A Y Y F +YV+G + + + ++L+AV + Sbjct: 295 AMIKKSDGATLYITRDIATAIYRARTY--NFVKNVYVVGQEQANHFRQLKAVLKKMGFDW 352 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 S+ ++ L R K+S R G+ I L + E Sbjct: 353 SDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLLEAISRAKSQIEAKNPDLEN 405 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG +V+F L DFD V + + P Y+QYAYAR +SI R+A Sbjct: 406 KEAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQSILRKA 463 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 F + S D ++I L ++ RV++ A EP +A Y L Sbjct: 464 N----------FQPDAAATYSLNDPESWEIIKLLQDFGRVVKRAADNYEPSLIAKYAISL 513 Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A F+ +++H R E+P RL L ++ A ++ L ++GVE+P +M Sbjct: 514 AQAFNKYYAHTRILDESPERD-----------SRLALSYSTAVVLKEALRLLGVEAPEKM 562 >gi|330827801|ref|YP_004390753.1| arginyl-tRNA synthetase [Aeromonas veronii B565] gi|328802937|gb|AEB48136.1| Arginyl-tRNA synthetase [Aeromonas veronii B565] Length = 581 Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 139/602 (23%), Positives = 240/602 (39%), Gaps = 96/602 (15%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 R+ ++R ++ AHG L+TN AM+L++P +P +A I+ + + V IAG GFIN Sbjct: 29 RVQVDRCKEKAHGDLATNLAMLLAKPARKNPRELAAAIIEHLPASDLIAKVEIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + +L + ++V S R + V +++ + N M V H R V+GD Sbjct: 89 FFFDQRWLAGQVEAMVTSANANVR--LPAPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVA 146 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNN 192 A + F G++V R +I D G Q L L F+ + Y+ Sbjct: 147 ARALEFLGHKVIRANHIGDWGTQFGMLIAYLEKMSNEHASDMALKDLEAFYTQAKRCYDE 206 Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252 D E V G E +L++ E+ +I D L Sbjct: 207 DEAFAERARNYVVKLQGGDEYCRTMWKKLVDMTMEQ-------------NQINYDRLNVS 253 Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312 DI + E ++ P +I+ +L +G E S+ +D F+ Sbjct: 254 LTNKDI-MGESMYNDMLP----EIVADLKAKGLAVE-------SEGATVVFLDE----FK 297 Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYV------- 364 + G+ + + KSDG + Y D+A K +YE G D ++Y + S ++ Sbjct: 298 NK-DGEAMGVIIQKSDGGFLYTTTDIACAKYRYETLGADRVMYFIDSRQHQHLMQAWTIT 356 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLY--RDGMPIKM-------SKRAGDFITLR---- 411 ++ V +V + ++L + R Y R G +K+ +RA + R Sbjct: 357 RKAGYVPESVPLEHHAFGMMLGKDGRPYKTRSGGTVKLVDLLNEAEERAAALLESRNSDL 416 Query: 412 ------HVVDEVGSDSVRFMMLWRKNSE--LLDFDFCKVKEQSKENPVFYVQYAYARCRS 463 +VV+ + +V++ L + + + D+D E N Y+QYAY R +S Sbjct: 417 SAEEKANVVNAIAMGAVKYADLSKNRTTDYIFDWDLMLSFEG---NTAPYLQYAYTRIQS 473 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 IFR+A ++D + NV E +E L L ++ + P+ L Sbjct: 474 IFRKA-----NIDAETLTGNVTLNEE----AEEVLAQKLIQFSDAVNGVADKGMPHLLCT 524 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 YLY+L+ F + N + RL L A A ++ GL ++G+ + Sbjct: 525 YLYELSGNFMTFYEACPINK-----DGVDEATRQSRLLLCAATAKVLKLGLGVLGIHTLE 579 Query: 584 EM 585 M Sbjct: 580 RM 581 >gi|301156166|emb|CBW15637.1| arginyl-tRNA synthetase [Haemophilus parainfluenzae T3T1] Length = 577 Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 134/599 (22%), Positives = 235/599 (39%), Gaps = 114/599 (19%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LGL+P A+ ++ + + IAG GFIN++L+P++L + Sbjct: 37 GDYQANGIMAAAKKLGLNPREFAQKVLDHADLSDIAEKTEIAGPGFINIFLNPTWLANNV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 S+ + G + K T V I++ S N MHVGH R ++GD + + F G+ V Sbjct: 97 SA-ALKDQNLGVSANEKQTIV-IDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204 R ++ D G Q L L F+R + Y+ D E V Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHASEMELQDLEAFYREAKKHYDEDESFAEKARNYV 214 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 V + D+Y + W +V D ++Q + D L + D+ + E Sbjct: 215 ----VKLQGGDEYCRTM-------WKKLV-DITMQQNQRNY-DRLNVTLTEKDV-MGESL 260 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 ++ P+ I+++L +QG E D L+ + P+ Sbjct: 261 YNPMLPA----IVEDLKKQGLAVE----------------DEGALVVYLDEFKNKEGEPM 300 Query: 325 ----LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 K DG + Y D+A K +YE D + + S ++++ A ++ K Sbjct: 301 GVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQHMQQ----AWLITRKAG 356 Query: 380 QI-NVLLCEL----VRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 + + E + L +DG P K R G + L ++DE Sbjct: 357 YVPDSFSLEHKNFGMMLGKDGKPFKT--RTGGTVKLADLLDEAIERATVLINEKNTNLSD 414 Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467 VG SV++ L + + FD+ + + N Y+QYAY R RSIF + Sbjct: 415 EEKTAVIEAVGIGSVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNK 473 Query: 468 AKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 A ++ P + + + D E L + L ++ ++ P+ L YLY Sbjct: 474 A---------NVNPTALAEAKIQLSDEKERALAIKLLQFEEAVQTVGKEGTPHVLCAYLY 524 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +LA F + H + A + + + RL+L + GL ++G+++ +M Sbjct: 525 ELAGAFSSFYEH------CPILNAEDENVKLSRLKLASLTEKTLKQGLALLGIKTIEKM 577 >gi|269303449|gb|ACZ33549.1| arginyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN] Length = 561 Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 147/584 (25%), Positives = 237/584 (40%), Gaps = 110/584 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH N AM L+R L P IAE IVA + +P + IAG GFIN SP +L + L Sbjct: 39 GHYQCNDAMKLARVLKKAPRAIAEAIVAELPQEP-FSLIEIAGAGFINFTFSPVFLNQQL 97 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 ++ G + + K+ I+F S N MHVGH R ++GD+LA + ++ G++V Sbjct: 98 EHFR-DALKLGFQ-VSQPKKIIIDFSSPNIAKDMHVGHLRSTIIGDSLARIFSYVGHDVL 155 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222 R +I D G A + Y Q + SDL ++L Y + Sbjct: 156 RLNHIGDWGT-----AFGMLISYLQENPCDYSDL--------------EDLTSLYKKAYV 196 Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDIIDNLA 281 F ++ K S Q ++ + D +A+ I I SE F + I DI+D + Sbjct: 197 CFTNDEEF---KKRSQQNVVALQAKDPQAIAIWEKICETSEKAFQK-----IYDILDIVV 248 Query: 282 --RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRPLL--KSDGSYTY 333 R Y LP D+++K LL S + + P + KSDG Y Y Sbjct: 249 EKRGESFYNPFLPEIIE------DLEKKGLLTVSNDAKCVFHEAFSIPFMVQKSDGGYNY 302 Query: 334 FAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 DLA + + E D +I V S + + LEA A A Q + L Sbjct: 303 ATTDLAAMRYRIEEDHADKIIIVTDLGQSLHFQLLEATAIAAG--YLQPGIFSHVGFGLV 360 Query: 393 RDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFM 425 D K+ R+G+ + LR ++D +G +++++ Sbjct: 361 LDPQGKKLKTRSGENVKLRELLDTAIEKAEEALREHRPELTDEEIQERAPVIGINAIKYS 420 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 L + F F K+ + + N ++ YAY R + I R R I Sbjct: 421 DLSSHRTSDYVFSFEKML-RFEGNTAMFLLYAYVRIQGIKR---------------RLGI 464 Query: 486 PQESEFDTSELQ------LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW--S 537 Q S E+Q L + L +P +E+ P+ L YLY+L F+G + Sbjct: 465 SQLSLEGPPEIQEPAEELLALTLLRFPEALESTIKELCPHFLTDYLYNLTHKFNGFFRDC 524 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 H +++P + RL L ++ +G++++G+++ Sbjct: 525 HIQDSPYAK-----------SRLFLCALTEQVLATGMHLLGLKT 557 >gi|45198315|ref|NP_985344.1| AFL206Cp [Ashbya gossypii ATCC 10895] gi|44984202|gb|AAS53168.1| AFL206Cp [Ashbya gossypii ATCC 10895] Length = 648 Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 130/556 (23%), Positives = 227/556 (40%), Gaps = 107/556 (19%) Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 A FI + P +L ++ V++ E YG + + KV IEF S N P H GH R Sbjct: 146 ANGSFIQFFFKPQFLFNVVVPDVLTRKEDYGSCKLVENKKVIIEFSSPNIAKPFHAGHLR 205 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGY 200 ++G L++L G+EV R Y+ D G Q LA+ F +Y ++AL + P + Sbjct: 206 STIIGGFLSNLYEKMGWEVIRMNYLGDWGKQFGLLAVG-FEKYGSEEALEKD----PINH 260 Query: 201 YPGVYLKHVGKELADKYSS----ELLNFPEEKWLPIVKDYSVQAMMKIIR---------- 246 VY++ V K++ + S E N + ++D +A+ KI + Sbjct: 261 LFDVYVR-VNKDIEQEGDSLPLEESTNGRARAYFKKMEDGDPEAL-KIWQKFRELSIQKY 318 Query: 247 -DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 D LNIQ+D++ E + + + + +G +E D Sbjct: 319 IDTYARLNIQYDVYSGESQVKK---ESMENALKLFQEKGLTHE----------------D 359 Query: 306 RKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY 363 + +L T + + ++ KSDG+ Y D+ +YE+ FD MIYV+ + Sbjct: 360 KGAILIDLTKFNKKLGKTIVQKSDGTTLYLTRDVGAAMDRYEKYKFDKMIYVIACQQDLH 419 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + + + K A E + GM MS R G + L ++++E Sbjct: 420 TAQFFEILKQMGHKWA-------ENLHHVNFGMVQGMSTRKGTVVFLDNILEETKEKMHE 472 Query: 424 FMMLWRKN-------------SELLDFDFCKVKE-QSKE--NPVF--------------Y 453 M RKN ++L+ +++ Q+K N F Y Sbjct: 473 VM---RKNEVKYAQVENPDEVADLVGISAVMIQDMQAKRINNYEFKWERMLSFEGDTGPY 529 Query: 454 VQYAYARCRSIFRQAKDIFPD----LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 +QYA++R RS+ R A +I P+ DF + + + + L+ LA+YP V+ Sbjct: 530 LQYAHSRLRSVERNASEITPEKWVTADFSVLT----------EAAAVTLVRLLAQYPDVL 579 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 NA EP + YL+ L + + +V ++ RL L + + Sbjct: 580 RNALKTHEPATIVTYLFKLTHQVSSCYD-------ILWVAGQAPEVATARLALYASCRQV 632 Query: 570 INSGLNIIGVESPNEM 585 +N+G+ ++G+ + M Sbjct: 633 LNNGMRLLGLTPVDRM 648 >gi|325204484|gb|ADY99937.1| arginyl-tRNA synthetase [Neisseria meningitidis M01-240355] Length = 572 Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 125/588 (21%), Positives = 240/588 (40%), Gaps = 84/588 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P +L + + + ++ +G K V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRPEFLAQNIQT-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++AF G V R+ ++ D G Q L + + + +DL + Y Sbjct: 144 RVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDA 203 Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 AD + L +E L + K D S+ + D L ++ + E ++ Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323 ++ ++D+L ++G E D +++F G+ Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DSAKVVFLDEFKNKEGEPAAFI 302 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 + K G + Y + DLA +Y G D ++YV+ + + ++L + Sbjct: 303 VQKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPEN 360 Query: 381 INVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 + + +DG P K R+GD + L ++ E Sbjct: 361 VGAAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAK 418 Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 VG +V++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 419 IGKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG--- 474 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 ++D V+ + E QL L ++ V+++ P+ LA YLY +A++F Sbjct: 475 ---EWDANAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLF 526 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + P L+ A+ RLQL + GL+++G++ Sbjct: 527 SRFY---EACPILKAEGASRNS----RLQLAKLTGDTLKQGLDLLGID 567 >gi|261365442|ref|ZP_05978325.1| arginine--tRNA ligase [Neisseria mucosa ATCC 25996] gi|288566109|gb|EFC87669.1| arginine--tRNA ligase [Neisseria mucosa ATCC 25996] Length = 572 Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 125/589 (21%), Positives = 241/589 (40%), Gaps = 86/589 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEALAGNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P +L + + + ++ +G K V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRPEFLAQNIHT-ALNDTRFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ F G V R+ ++ D G Q L + + + +DL + Y Sbjct: 144 RVLEFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203 Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 AD + L +E L + K D S+ + D L ++ + E ++ Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL- 325 ++ ++D+L ++G E D +++F D + Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKDGEPAAFI 302 Query: 326 --KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVS----EKK 378 K G + Y + DLA + + R D ++YV+ + + ++L + + K Sbjct: 303 VQKQGGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPEDAK 362 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 A+ + + +DG P K R+GD + L ++ E Sbjct: 363 AE---FIGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAA 417 Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VG +V++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 418 KIGKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG-- 474 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 ++D+ V+ + E QL L ++ V+++ P+ LA YLY A++ Sbjct: 475 ----EWDVTAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQTATL 525 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 F + P L+ A RLQL + GL+++G++ Sbjct: 526 FSRFY---EACPILKSEGATRNS----RLQLAKLTGDTLKQGLDLLGID 567 >gi|75909766|ref|YP_324062.1| arginyl-tRNA synthetase [Anabaena variabilis ATCC 29413] gi|109894972|sp|Q3M769|SYR_ANAVT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|75703491|gb|ABA23167.1| arginyl-tRNA synthetase [Anabaena variabilis ATCC 29413] Length = 588 Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 142/596 (23%), Positives = 239/596 (40%), Gaps = 100/596 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N A+ LS+ LG P IA IV ++ + ++ IAG GFINL L +YL L Sbjct: 40 GDYQANVALSLSKKLGQPPRAIASAIVEKLDVSEICETPEIAGPGFINLKLKTAYLEAQL 99 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 ++I G + ++F S N MHVGH R ++GD++A ++ F G++V Sbjct: 100 NAIQADS-RLGVPTAKHPQREIVDFSSPNIAKEMHVGHLRSTIIGDSIARILEFRGHDVL 158 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS--- 219 R ++ D G Q L YL+ V E ++ Sbjct: 159 RLNHVGDWGTQFGMLI-------------------------TYLREVSPEALTTANALDI 193 Query: 220 -ELLNFPEEKWLPIVKDYSVQ--AMMKIIRDDLKALNIQHDI-FISEDDFHRGDPSPIRD 275 +L++F + D + Q A +++R A + H + E R + I D Sbjct: 194 GDLVSFYRQAKQRFDADEAFQETARQEVVRLQAGATDTLHAWKLLCEQS--RQEFQVIYD 251 Query: 276 IID-NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-----PLL--KS 327 ++D L +G + L P + + + + + + +R PL+ KS Sbjct: 252 LLDVKLTERGESFYNPLLPTVVEGLEASGLLVENQGAKCVFLDGFTNREGEPLPLIVQKS 311 Query: 328 DGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386 DG Y Y DLA + + ++ ++YV + + + + VA +KA Sbjct: 312 DGGYNYATTDLAALRYRIQKDEAKRIVYVTDAGQANHFAQFFQVA-----RKAGWIPNDV 366 Query: 387 ELVR------LYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416 ELV L DG K R+GD + LR ++DE Sbjct: 367 ELVHVPFGLVLGEDGK--KFKTRSGDTVRLRDLLDEAVSRAHADLEERLKAEEREETPEF 424 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 VG +V++ L + + F + K+ + K N Y+ YAYAR + I R+ Sbjct: 425 IDKVAEVVGISAVKYADLSQNRTSNYIFSYDKMLD-LKGNTAPYMLYAYARIQGISRKGG 483 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 F DL + + ++ ++EF L +L + VI P +L YLY+L+ Sbjct: 484 INFADLGDN--AKVILQHDTEF-----ALAKYLLQLGEVISTVEADLLPNRLCEYLYELS 536 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ + N ++ + A L RL L A + GL+++G++ M Sbjct: 537 KKFNTFYDR---NQGVQVLSAEE-PLRTSRLVLCDLTARTLKLGLSLLGIQVLERM 588 >gi|86147649|ref|ZP_01065958.1| arginyl-tRNA synthetase [Vibrio sp. MED222] gi|218710198|ref|YP_002417819.1| arginyl-tRNA synthetase [Vibrio splendidus LGP32] gi|254782991|sp|B7VI24|SYR_VIBSL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|85834560|gb|EAQ52709.1| arginyl-tRNA synthetase [Vibrio sp. MED222] gi|218323217|emb|CAV19394.1| Arginyl-tRNA synthetase [Vibrio splendidus LGP32] Length = 577 Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 135/610 (22%), Positives = 238/610 (39%), Gaps = 136/610 (22%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG +P A+ ++ + +D V IAG GF+N++L ++L + Sbjct: 37 GDYQANGIMGVAKRLGTNPREFAQKVLDVLNLDGIASKVEIAGPGFLNIFLDETFLAQQA 96 Query: 103 ------SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 S + VS E + ++ + N MHVGH R ++GD + + F Sbjct: 97 DAALADSRLGVSAAE--------AQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEF 148 Query: 157 SGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDL- 196 G++V R +I D G Q L L F+R + LY+ D + Sbjct: 149 LGHKVIRANHIGDWGTQFGMLIANLERIQAETGEVSMELSDLEQFYRESKKLYDEDEEFA 208 Query: 197 --PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254 GY V + D Y +E+ W +V VQ R + +++ Sbjct: 209 VKARGYV-------VKLQGGDAYCAEM-------WKKLVDVTMVQNQRNYDRLN---VSL 251 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR-- 312 D + E ++ + +I+ +L QG E D Q++F Sbjct: 252 TRDDVMGESMYNH----MLSNIVSDLQTQGLAKES---------------DGAQVVFLDE 292 Query: 313 -STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY------- 363 GD + + K DG + Y D+A K ++E G D ++Y + S + Sbjct: 293 YKNKDGDPMGVIVQKRDGGFLYTTTDIACAKYRFEELGADRVLYFIDSRQHQHLMQAWTI 352 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 V++ V +VS + ++L +DG P K RAG + L ++DE + + Sbjct: 353 VRKAGYVPESVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRATQ 404 Query: 424 FMMLWRKNSELLD--------------FDFCKVKEQSKENPVF--------------YVQ 455 ++ KN EL + + + + + VF Y+Q Sbjct: 405 --LIESKNPELAEDEKKTIANTVAMAAVKYADLSKHRTTDYVFDWENMLAFEGNTAPYMQ 462 Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515 YAY R SIF +A L+ ++ I +E E LI L ++ +++ Sbjct: 463 YAYTRVASIFAKAGISMDSLEGEI----KITEE-----KEKALIAKLLQFEEAVQSVARE 513 Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575 +P+ + YL++LA F + + A + + RL+L A I GL+ Sbjct: 514 GQPHIMCSYLFELAGQFSSFYE------ACPILVAEDETVKQSRLKLAALTAKTIKQGLS 567 Query: 576 IIGVESPNEM 585 ++G+E+ M Sbjct: 568 LLGIETLERM 577 >gi|146305572|ref|YP_001186037.1| arginyl-tRNA synthetase [Pseudomonas mendocina ymp] gi|166232824|sp|A4XPN9|SYR_PSEMY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|145573773|gb|ABP83305.1| arginyl-tRNA synthetase [Pseudomonas mendocina ymp] Length = 579 Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 131/572 (22%), Positives = 239/572 (41%), Gaps = 85/572 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E +D +HG ++N AM+L++P G+ P +AE ++A + D + V IAG GF+N Sbjct: 30 IQVENTKDKSHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADAGIAKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + L + L + + + G + G +V ++ + N MHVGH R ++GD +A Sbjct: 90 FQNSDALAQRLEAALADA-QLGVHKNGPAQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK-HVG 210 ++ F G V R+ ++ D G Q L L+ A + +DL EG+Y + Sbjct: 149 RVLEFLGDTVIRQNHVGDWGTQFGML-LAYMQENPAAAESELADL-EGFYRAAKKRFDES 206 Query: 211 KELADKYSSEL---LNFPEEKWLPIVKDYS------VQAMMKIIRDDLKALNIQHDIFIS 261 E AD+ + EL L + + L + ++ QA+ + L +++ + + Sbjct: 207 PEFADR-ARELVVQLQAGDAECLRLWHRFNDISLSHCQALYDRLGVKLSMADVKGESAYN 265 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 +D + ++ +LA +G + E Q MD F++ G+ + Sbjct: 266 DD---------LPQVVADLAAKGLLTE-------DNGAQCVFMDE----FKNAE-GNPLP 304 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378 + K+ G Y Y DLA +Y G D ++Y + + + + + A A Sbjct: 305 LIVQKAGGGYLYATTDLA--ATRYRAGVLKADRVLYFVDQRQALHFQMVFACARLAGFVP 362 Query: 379 AQINVLLCELVRL---------YRDGMPIKM-------SKRAGDFIT----------LRH 412 A + + + RDG +K+ +RA + + LR Sbjct: 363 ASMELEHMGFGTMNGPDGRPFKTRDGGTVKLVQLLDEAEQRAYELVKSKNPELAEDELRR 422 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 + VG SV++ L + + F+F + + N Y+ YAY R +FR+ + Sbjct: 423 IARVVGIASVKYADLSKHRASDYSFNF-DLMLSFEGNTAPYLLYAYTRVAGVFRK---LG 478 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 +D ++ R + E E L LA++ ++ + P+ L YLYDLA +F Sbjct: 479 KGID-EIGGRIALVAE-----QEQALAAKLAQFGELLASVADKGTPHMLCSYLYDLAGLF 532 Query: 533 HGHWSH---------GRENPRLRFVQANNRKL 555 + + + RLR R L Sbjct: 533 SSFYENCPILAAEDEATRDSRLRLTALTGRTL 564 >gi|325695318|gb|EGD37218.1| arginine--tRNA ligase [Streptococcus sanguinis SK150] Length = 562 Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 142/600 (23%), Positives = 246/600 (41%), Gaps = 110/600 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E+P+ G ++ A L++ P IA I +I D V G ++N + Sbjct: 26 LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIAADIAEKIDT-AHFDKVVATGP-YVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 LS + + +++ ++ G +YG+ G + I+ S N P VGH R V+GD L+ Sbjct: 83 LSKAEISGQVIKEVIKDGADYGQQNEGNNQNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY + ++ D G Q L ++ W Q+A+ N P +Y++ + Sbjct: 143 NIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKWGSQEAVEAN----PIDELLKLYVR-IN 197 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 E+ + S L+ W ++D +A + + RD+ L N +++ E D Sbjct: 198 AEIENDPS---LDEEGRLWFKKLEDGDPEATELWQWFRDESLTEFNRIYELLGVEFDSLN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323 G+ + + I L +G + E SK D++ D + P Sbjct: 255 GEAFYNDKMDEGIQILEEKGLLQE-------SKGASIVDLE-------------DFNLPP 294 Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374 + KSDG+ Y D+A Y Y F +YV+G + + + ++L+AV + Sbjct: 295 AMIKKSDGATLYITRDIATAIYRARTY--NFVKNVYVVGQEQANHFRQLKAVLKKMGFDW 352 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 S+ ++ L R K+S R G+ I L + E Sbjct: 353 SDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLLEAISRAKSQIEAKNPDLEN 405 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG +V+F L DFD V + + P Y+QYAYAR +SI R+A Sbjct: 406 KEAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQSILRKA 463 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 F + S D ++I L ++ RV++ A EP +A Y L Sbjct: 464 N----------FQPDAAATYSLNDPESWEIIKLLQDFGRVVKRAADNYEPSLIAKYAISL 513 Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A F+ +++H R E+P RL L ++ A ++ L ++GVE+P +M Sbjct: 514 AQAFNKYYAHTRILDESPERD-----------SRLALSYSTAVVLKEALRLLGVEAPEKM 562 >gi|159030666|emb|CAO88336.1| argS [Microcystis aeruginosa PCC 7806] Length = 585 Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 144/584 (24%), Positives = 238/584 (40%), Gaps = 91/584 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N ++ L++ L P +A ++ ++ID IAG GFINL L P YL L Sbjct: 40 GDYQCNISLSLAKELKQKPREVAATLLKNLEIDDLCQPPEIAGPGFINLTLKPGYLETQL 99 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 ++ G K+ ++F S N MHVGH R ++GD +A ++ F ++V Sbjct: 100 KDLITDN-RLGVATANPSQKIIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFRHHQVI 158 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222 R ++ D G Q L + Y AL D+ L G Y K A E Sbjct: 159 RLNHVGDWGTQFGMLITYLQEAYPSALTQADA-LDLGDLVSFYKK------AKIRFDEDE 211 Query: 223 NFPEEKWLPIVKDYS--------VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP--SP 272 NF E +VK S Q + + R + + + DI ++E RG+ +P Sbjct: 212 NFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDILDIKLTE----RGESFYNP 267 Query: 273 -IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + +I L +QG + E G L T K GD + + KSDG Sbjct: 268 YLETVIRELEQQGLLIEDNGALCVFLDGFTNK--------------EGDPLPLIVKKSDG 313 Query: 330 SYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387 Y Y DLA ++ + ++ + +IYV + + + ++ VA + V+ Sbjct: 314 GYNYATTDLAAICYRVREDKA-ERIIYVTDAGQANHFAQVFQVAKKAGFLPDNVAVVHVA 372 Query: 388 L-VRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------------ 416 + L DG K+ R+G+ + L+ ++D+ Sbjct: 373 FGLVLGEDGK--KLKTRSGETVKLQELLDQAIACSLADLEKRLASEEREETGDFIANTAE 430 Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 VG +V++ L + + F + K+ + N Y+ YAYAR +SI R+ F DL Sbjct: 431 TVGLSAVKYADLSQNRNSNYVFSYDKML-NLQGNTAPYMLYAYARVQSISREGGINFQDL 489 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + +I + D SEL L L + P VI P +L YLY+L+ ++ Sbjct: 490 SAN---SPLILK----DESELILAKQLLQLPEVISAVEEDLLPNRLCDYLYELSKKYNRF 542 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 + + P L+ + + RL L A + GL+++G+ Sbjct: 543 YENC---PVLKAAEP----IKTSRLVLCDLTARTLKLGLSLLGI 579 >gi|227355376|ref|ZP_03839777.1| arginyl-tRNA synthetase [Proteus mirabilis ATCC 29906] gi|227164600|gb|EEI49471.1| arginyl-tRNA synthetase [Proteus mirabilis ATCC 29906] Length = 576 Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 139/601 (23%), Positives = 235/601 (39%), Gaps = 119/601 (19%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ +G+ P +AE I+ + I D V IAG GFIN++LSP ++ + Sbjct: 37 GDYQANGVMGAAKKMGIPPRQLAEKILEHLDITDIADKVEIAGPGFINIFLSPVWVAQ-Q 95 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + ++ + T V I++ S N MHVGH R ++GD A ++F G+ V Sbjct: 96 AEFALADEHLNITKVTPETIV-IDYSSPNVAKQMHVGHLRSTIIGDASARTLSFLGHNVI 154 Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204 R ++ D G Q L L F+R + Y+ D E V Sbjct: 155 RANHLGDWGTQFGMLIAYLEKKQNENAADMALADLEEFYREAKKCYDEDEVFAERARNYV 214 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 G D+Y + W +V Q + R LN+ ++EDD Sbjct: 215 VRLQGG----DEYCRTM-------WRKLVDITMQQNQLTYQR-----LNVT----LTEDD 254 Query: 265 FHRGDP--SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 G+ +P + I+ +L +G E + T D + + G+ + Sbjct: 255 I-MGESLYNPMLPGIVADLKAKGLAVES-----EGATVVFLDEYKNK-------EGEPMG 301 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMI--YVMGSDHS------GYVKRLEAVAAA 373 + K DG Y Y D+A K ++E+ N + Y+ H V++ + + Sbjct: 302 VIIQKKDGGYLYTTTDIACAKYRHEQLHANRVLYYIDSRQHQHLMQAWTIVRKAGYIPDS 361 Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------- 416 +S + ++L +DG P K R+G + L ++DE Sbjct: 362 MSLEHHMFGMMLG------KDGRPFK--TRSGGTVRLTDLLDEAHERALTLIREKNPDMD 413 Query: 417 ----------VGSDSVRFMMLWRKNSE--LLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 VG +V++ L + + + D+D E N Y+QYAY R SI Sbjct: 414 EEELNNIARVVGIGAVKYADLSKNRTTDYIFDWDLMLSFEG---NTAPYMQYAYTRVASI 470 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 F++A ++D + + S E QL + L ++ I P+ + Y Sbjct: 471 FKRA-----EIDESALTQPI----SLTQPHEKQLALRLVQFDETITQVAREGTPHVMCAY 521 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 LYDLA F G + + + A + + RL+L A + GL +G+E+ + Sbjct: 522 LYDLAQSFSGFYEN------CPILSAEDDNVRQSRLKLARLTARTLKQGLETLGIETVDR 575 Query: 585 M 585 M Sbjct: 576 M 576 >gi|188585877|ref|YP_001917422.1| arginyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350564|gb|ACB84834.1| arginyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 566 Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 142/567 (25%), Positives = 240/567 (42%), Gaps = 93/567 (16%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIG 118 +P IA IV I+ ++ G +IN + L + L I G YG++ G Sbjct: 52 NPAQIASEIVENIEAGEYFSAIEATGP-YINFTCNLEKLNQDTLERIYTQGRGYGKSSEG 110 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI-NTL 177 G V I+F S N P GH R V+G++LA++ GY V R ++ D G Q N + Sbjct: 111 DGKTVVIDFSSPNIAKPFGFGHLRSTVIGNSLANVYETLGYNVERINHLGDWGTQFGNLI 170 Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLK-HVGKE----LADKYSSELLNFPE-----E 227 A + W +Q L + P Y +Y+K H E L D+ E E Sbjct: 171 AAYLKWGNEQELEKD----PIEYLYDLYVKFHEEMEEDPSLKDEGREWFRKLEEGDETAE 226 Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287 K ++ S++ +I R L ++ D E ++ + D I+ + G Sbjct: 227 KLWEWFREMSLKDFERIYR----KLGVKFDSNKGEAFYN----DKLEDTIETIKDSGIA- 277 Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKY 345 S+ D++ + L P L K DG+ Y DL +Y Sbjct: 278 ------TYSQGALIVDLNEENL------------PPCLLKKQDGATLYITRDLTAAFYRY 319 Query: 346 ER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKR 403 E FD +YV+G+D + ++ V + A+ + + L+R KMS R Sbjct: 320 ENYQFDKALYVVGADQELHFNQMFNVLKKMGCDWAENMEHVPFGLIRF----QDRKMSTR 375 Query: 404 AGDFITLRHVVDE-------------------------VGSDSVRFMMLWRKNSELLDFD 438 G+ + L V+++ VG +V F L + ++FD Sbjct: 376 KGNMVYLEDVLEKAKQLALETIREKNPELDNQEDIAEMVGVGAVIFGDLSNDRVKEVNFD 435 Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498 + K+ + + E Y+QY +AR S+ ++A DI P+ D D+ V +S+++ + +QL Sbjct: 436 WDKILDFNGETAP-YLQYTHARICSVLKKA-DITPEYDKDI----VKHLQSDYEKNVIQL 489 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 LA + ++ A +P+ LA YL DL F+ ++H P L + ++ Sbjct: 490 ---LAGFTDALKRTRDANKPHILARYLLDLGREFNRFYNHC---PILNETE----EVKQA 539 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 RL L+ AV ++ +GL I+G+++P M Sbjct: 540 RLILIDAVRQVLANGLGIMGIKAPEAM 566 >gi|254229698|ref|ZP_04923107.1| arginyl-tRNA synthetase [Vibrio sp. Ex25] gi|151937743|gb|EDN56592.1| arginyl-tRNA synthetase [Vibrio sp. Ex25] Length = 545 Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 135/610 (22%), Positives = 231/610 (37%), Gaps = 136/610 (22%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG +P A+ ++ + +D IAG GFIN++LS +L K Sbjct: 5 GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 64 Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + + R + K I ++ + N MHVGH R ++GD + + F G++ Sbjct: 65 DAALADE----RLGVAKEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHK 120 Query: 161 VTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGYY 201 V R +I D G Q L L F+R + LY+ D + Sbjct: 121 VIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLYDEDEEFAVKAR 180 Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNI 254 V G D+Y +E+ W +V +Q + + RDD+ ++ Sbjct: 181 NYVVKLQSG----DEYCAEM-------WKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 229 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF--- 311 +D+ + I+ +L QG E D Q++F Sbjct: 230 YNDM--------------LPKIVADLKEQGLAVED---------------DGAQVVFLDE 260 Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY------- 363 G+ + + K DG + Y D+A K +YE D ++Y + S + Sbjct: 261 YKNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYEELSADRVLYFIDSRQHQHLMQAWTI 320 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 V++ V +VS + ++L +DG P K RAG + L ++DE + + Sbjct: 321 VRKAGYVPESVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRAAQ 372 Query: 424 FMMLWRKNSEL-----------LDFDFCKVKEQSKE-----------------NPVFYVQ 455 ++ KN EL + K + SK N Y+Q Sbjct: 373 --LIESKNPELDAEEKEKISKTVAMAAVKYSDLSKHRTTDYVFDWDNMLAFEGNTAPYMQ 430 Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515 YAY R SIF +A L D+ D E LI L ++ +++ Sbjct: 431 YAYTRVASIFAKAGVAMDALQGDI---------KITDEKEKALIAKLMQFEEAVQSVARE 481 Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575 +P+ + YL++LA F + + A + + RL+L A I GL+ Sbjct: 482 GQPHIMCSYLFELAGQFSSFYEA------CPILVAEDEAVKQSRLKLAALTAKTIKQGLS 535 Query: 576 IIGVESPNEM 585 ++G+++ M Sbjct: 536 LLGIDTLERM 545 >gi|262394871|ref|YP_003286725.1| arginyl-tRNA synthetase [Vibrio sp. Ex25] gi|262338465|gb|ACY52260.1| arginyl-tRNA synthetase [Vibrio sp. Ex25] Length = 577 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 136/610 (22%), Positives = 231/610 (37%), Gaps = 136/610 (22%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG +P A+ ++ + +D IAG GFIN++LS +L K Sbjct: 37 GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLDGIASKTEIAGPGFINIFLSEEFLAKQA 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + + R + K I ++ + N MHVGH R ++GD + + F G++ Sbjct: 97 DAALADE----RLGVAKEEAQTIVADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHK 152 Query: 161 VTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGYY 201 V R +I D G Q L L F+R + LY+ D + Sbjct: 153 VIRANHIGDWGTQFGMLIANLERVQQESGEVSMELADLEGFYRESKKLYDEDEEFAVKAR 212 Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNI 254 V G D+Y +E+ W +V +Q + + RDD+ ++ Sbjct: 213 NYVVKLQSG----DEYCAEM-------WKKLVDVTMIQNQRNYDRLNVSLTRDDVMGESM 261 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR-- 312 +D+ P I+ +L QG E D Q++F Sbjct: 262 YNDML----------PK----IVADLKEQGLAVED---------------DGAQVVFLDE 292 Query: 313 -STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY------- 363 G+ + + K DG + Y D+A K +YE D ++Y + S + Sbjct: 293 YKNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYEELSADRVLYFIDSRQHQHLMQAWTI 352 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 V++ V +VS + ++L +DG P K RAG + L ++DE + + Sbjct: 353 VRKAGYVPESVSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEVRAAQ 404 Query: 424 FMMLWRKNSEL-----------LDFDFCKVKEQSKE-----------------NPVFYVQ 455 ++ KN EL + K + SK N Y+Q Sbjct: 405 --LIESKNPELDAEEKEKISKTVAMAAVKYSDLSKHRTTDYVFDWDNMLAFEGNTAPYMQ 462 Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515 YAY R SIF +A L D+ D E LI L ++ +++ Sbjct: 463 YAYTRVASIFAKAGVAMDALQGDI---------KITDEKEKALIAKLMQFEEAVQSVARE 513 Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575 +P+ + YL++LA F + + A + + RL+L A I GL+ Sbjct: 514 GQPHIMCSYLFELAGQFSSFYEA------CPILVAEDEAVKQSRLKLAALTAKTIKQGLS 567 Query: 576 IIGVESPNEM 585 ++G+++ M Sbjct: 568 LLGIDTLERM 577 >gi|325689182|gb|EGD31189.1| arginine--tRNA ligase [Streptococcus sanguinis SK115] Length = 562 Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 142/600 (23%), Positives = 246/600 (41%), Gaps = 110/600 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E+P+ G ++ A L++ P IA I +I D V G ++N + Sbjct: 26 LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIAADIAEKIDT-AHFDKVVATGP-YVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 LS + + +++ ++ G +YG+ G + I+ S N P VGH R V+GD L+ Sbjct: 83 LSKAEISGQVIKEVIKDGADYGQQNEGNNQNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY + ++ D G Q L ++ W Q+A+ N P +Y++ + Sbjct: 143 NIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKWGSQEAVEAN----PIDELLKLYVR-IN 197 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 E+ + S L+ W ++D +A + + RD+ L N +++ E D Sbjct: 198 AEIENDPS---LDEEGRLWFKKLEDGDPEATELWQWFRDESLTEFNRIYELLGVEFDSLN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323 G+ + + I L +G + E SK D+ +D + P Sbjct: 255 GEAFYNDKMDEGIQILEEKGLLQE-------SKGASIVDL-------------EDFNLPP 294 Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374 + KSDG+ Y D+A Y Y F +YV+G + + + ++L+AV + Sbjct: 295 AMIKKSDGATLYITRDIATAIYRARTY--NFVKNVYVVGQEQANHFRQLKAVLKKMGFDW 352 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 S+ ++ L R K+S R G+ I L + E Sbjct: 353 SDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLLEAISRAKSQIEAKNPDLEN 405 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG +V+F L DFD V + + P Y+QYAYAR +SI R+A Sbjct: 406 KEAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARVQSILRKA 463 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 F + S D ++I L ++ RV++ A EP +A Y L Sbjct: 464 N----------FQPDAEATYSLNDPESWEIIKLLQDFGRVVKRAADNYEPSLIAKYAISL 513 Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A F+ +++H R E+P RL L ++ A ++ L ++GVE+P +M Sbjct: 514 AQAFNKYYAHTRILDESPERD-----------SRLALSYSTAVVLKEALRLLGVEAPEKM 562 >gi|309378705|emb|CBX22655.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 572 Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 125/592 (21%), Positives = 242/592 (40%), Gaps = 92/592 (15%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P +L + + + ++ +G K V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRPEFLARNIQT-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++AF G V R+ ++ D G Q L + + + +DL + Y Sbjct: 144 RVLAFMGNTVVRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203 Query: 212 ELADKYSSEL--LNFPEEKWLPIVKDY------SVQAMMKIIRDDLKALNIQHDIFISED 263 AD + L +E L + K + QA+ + L ++ + ++D Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYNTLGLKLHPEDVAGESKYNDD 263 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDV 320 ++ ++D+L ++G E D +++F G+ Sbjct: 264 ---------LQAVVDDLVQKGLAVED---------------DGAKVVFLEEFKNKEGEPA 299 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVS---- 375 + K G + Y + DLA + + R D ++YV+ + + ++L + Sbjct: 300 AFIVQKQGGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPE 359 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416 + KA+ + + +DG P K R+GD + L ++ E Sbjct: 360 DAKAE---FIGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGAD 414 Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG +V++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 415 EAAKIGKTVGIGAVKYADLSKNRTSDYVFDWDAMLS-FEGNTAPYLQYAYTRVQSVFRKA 473 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 +D V+ + E QL L ++ V+++ P+ LA YLY + Sbjct: 474 G------KWDATAPTVLTE-----PLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQI 522 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 A++F + P L+ A RLQL + GL+++G++ Sbjct: 523 ATLFSRFY---EACPILKAEGATRNS----RLQLAKLTGDTLKQGLDLLGID 567 >gi|326407574|gb|ADZ64645.1| arginyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56] Length = 564 Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 140/592 (23%), Positives = 249/592 (42%), Gaps = 93/592 (15%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IE+P+ G L+ A L++ L P IA I KID IA ++N + Sbjct: 27 IIEKPKSSDLGDLAF-PAFQLAKTLRKSPQIIAGEIAE--KIDTKGFEKVIAVGPYVNFF 83 Query: 93 LSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + +++ ++ G YG IG+G V I+ + N P +GH R V+GD++A Sbjct: 84 LDKNATASEVIREVLTEGEHYGDANIGQGGNVPIDMSAPNIAKPFSIGHLRSTVIGDSIA 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGVYLKHV 209 + GY+ + ++ D G Q L ++ + +Y + + N D Y + + Sbjct: 144 KIYEKLGYQPIKINHLGDWGKQFGLL-ITAYKKYGDEATITANPIDELLKLYVKINAEAK 202 Query: 210 GKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 D+ + + +E+ L I K +S ++++ R + L + D F+ E + Sbjct: 203 EDPEVDEEGRQWFLKMEQGDEEALRIWKWFSDVSLIEFNR-IYRKLGVSFDHFMGESFY- 260 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL- 325 + I+++L + ++E SK D+++ L P L Sbjct: 261 ---SDKMDAIVEDLESKNLLHE-------SKGALIVDLEKYNL------------NPALI 298 Query: 326 -KSDGSYTYFAADL---AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--AAAVSEKKA 379 K+DG+ Y DL AY K + F +YV+G + + + K+L+AV A Sbjct: 299 KKTDGATLYITRDLATAAYRKKTF--NFVKSLYVVGGEQTNHFKQLKAVLKEAGYDWSDD 356 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 ++V + + + K S R G + L +DE Sbjct: 357 MVHVPFGMVTQGGK-----KFSTRKGHVVKLEMALDEAVDRAEKQIEAKNPNLENKEEVA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +V+F L + DFD + V + + P YVQYA+AR +SI R+A Sbjct: 412 KQVGVGAVKFYDLKTDRNNGYDFDLDEMVSFEGETGP--YVQYAHARIQSILRKAN---R 466 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 +D + V D +++ L E+P V++ A EP +A Y LA F+ Sbjct: 467 KVDINNISLAV------SDAEAWEIVKALKEFPNVVKRAADNYEPSVIAKYAISLAQAFN 520 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R + ++ +L RL L+ A + ++ L ++GV +P M Sbjct: 521 KYYAHVR-------ILEDDAQLD-GRLALISATSIVLKEALRLLGVAAPENM 564 >gi|307595328|ref|YP_003901645.1| arginyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429] gi|307550529|gb|ADN50594.1| arginyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429] Length = 643 Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 149/629 (23%), Positives = 266/629 (42%), Gaps = 123/629 (19%) Query: 42 HGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRK 100 +G+L+ I+ +D + I + I+ ++K+ ++ V + G++N+ ++ + Y Sbjct: 41 YGYLAIPMHSIVREHGNIDEI-INQKIIPQLKL---INKVVLV-NGYLNIDININDYANI 95 Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 +L SI G +YG + IE SANP PMH+GH R AV+GD+LA L+ F G Sbjct: 96 VLLSISNLGDKYGLSDKCPTGSYIIEHTSANPAKPMHIGHGRNAVLGDSLARLLRFCGAS 155 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP----GVY---------LK 207 V +Y+ND G Q+ + + + L S + G+ P G+ +K Sbjct: 156 VKVHFYVNDCGDQMPYVGIGYYVAKDLVL----SRINGGWKPDEVMGIIYSVTYAVSEIK 211 Query: 208 HVGKELAD-----KY-SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 + K++ KY + L ++W+ ++ ++ ++ ++ LK L D+ + Sbjct: 212 RLSKQIEQLKNEGKYDDANKLIGERDEWVSVINNF-IEKDKELTEALLKGLGKFEDLPLM 270 Query: 262 EDDFHR----GDP---SPIRDIID--------NLARQGYVYEG----------------I 290 + R GD IR+ +D L R G V++ + Sbjct: 271 VKQWSRAYEEGDEFVRKVIREAVDVVLTGFRITLDRLGVVFDSWDFESEVAVDNGGVSRV 330 Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-------------RPLLKSDGSYTYFAAD 337 + + Q + D L+FR+ D++ LL+SDG+ Y D Sbjct: 331 INELLRRAPQYMERDNGALVFRADKYAQDLNLWDELKLPRYIPKATLLRSDGTSLYLTRD 390 Query: 338 LAYFKCKYER-GFDNMIYVMGSD--HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394 +AY ++ FD +I V+GS+ H RL A E ++ E+V L Sbjct: 391 IAYALWFWDNFKFDKLIRVIGSEQAHPQAQLRLALHAMGYHELARKLIHYSYEMVNL--A 448 Query: 395 GMPIKMSKRAGDFITLRHVVDE------------------------VGSDSVRFMMLWRK 430 GM KMS R G +++L +++E V ++R+ L Sbjct: 449 GM--KMSGRKGIYVSLDELLNEAKDRVMEIVKGRFPPDEADKVAEAVAVGAIRYSFLSVS 506 Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490 ++ L F + KV ++N +VQY Y R I +A ++ P L P N+ +E E Sbjct: 507 PNKPLTFSWDKVL-NLRQNSGPFVQYTYVRTNGILEKAGEV-PKL--TQIPNNIASEEKE 562 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550 L + L EYP VI A + Y+ L+ VF+ ++ + P L Sbjct: 563 -------LTLLLGEYPEVIAKAAQELRLENIIEYVNKLSLVFNSYYE---KYPVLNAEPG 612 Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGV 579 + R+ LV+AV +++ + ++I+G+ Sbjct: 613 ----IREFRINLVNAVRTVLGNAMDILGI 637 >gi|229004905|ref|ZP_04162633.1| Arginyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4] gi|228756349|gb|EEM05666.1| Arginyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4] Length = 562 Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 143/611 (23%), Positives = 251/611 (41%), Gaps = 133/611 (21%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG---FI 89 +IE P+ G + M L++ P IA+ I ++ +S F K ++ Sbjct: 27 LIETPKQDEFGDAAFPCFM-LAKQYKKAPAIIAKEIAEKLN-----NSFFTKVKAVGPYV 80 Query: 90 NLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 N++ + + +L +I+V EYG+ G+ V I++ S N P +GH R ++G+ Sbjct: 81 NVFFNRHIVSDDVLKAILVEKEEYGQGYFGREKTVVIDYSSPNIAKPFSMGHLRSTMIGN 140 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 +L + GYEV YI D G Q L + Y++ + N+ + E ++ + Sbjct: 141 SLKHIAEKCGYEVVGINYIGDWGTQFGKLITA----YKK--WGNEELVKEDPIRELFKLY 194 Query: 209 VGKELADKYSSELLNFPE-----EKWLPIVKDYSVQAMM---KIIRDDLKALNIQHDIFI 260 V + E+ +PE W ++D +A+ + LK + +++ Sbjct: 195 V------HFHEEVKEYPELEEEGRAWFKKLEDGDEEAVFLWNWFRHESLKEFSRIYELLG 248 Query: 261 SEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 E +G+ + D +D L +G + E S Q +++++ + Sbjct: 249 VEFTNFQGEAFYNDKMGDFVDILEEKGLLEE-------SDGAQVVNLEKEDM-------- 293 Query: 318 DDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372 P L KSDG+ Y DL Y + YE FD +YV+G++ S + + V Sbjct: 294 ----PPCLIKKSDGATLYATRDLTAALYRQNTYE--FDKALYVVGAEQSLHFTQFFTVLK 347 Query: 373 AVS----EKKAQINVLLCELVRLYRDGMPIKMSKRAG----------------------- 405 + + A + L + +DG KMS R G Sbjct: 348 KLGYNWVDGMAHVPFGL-----ILKDGK--KMSTRKGKVVLLEEVLEEAITLAEQNIEEK 400 Query: 406 --DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCR 462 D V +VG +V F L + ++F K +K + + P YVQY +AR Sbjct: 401 NPDLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLEKMLKFEGETGP--YVQYTHARAC 458 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL--------IVHLAEYPRVIENATI 514 SI R+ + +EF+T QL I L +P+V+E A Sbjct: 459 SILRK-------------------ENAEFETEAFQLNDDHSWSTIKLLNRFPQVVETAFF 499 Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 EP +A YL D+A F+ ++ + +R ++ + K + RL LV+AV ++ GL Sbjct: 500 KNEPSHIAKYLLDVAQAFNKYYGN------VRILEEDKEKES--RLALVYAVTIVLKEGL 551 Query: 575 NIIGVESPNEM 585 ++G+ +P EM Sbjct: 552 RLLGMGAPEEM 562 >gi|262037521|ref|ZP_06010980.1| arginine--tRNA ligase [Leptotrichia goodfellowii F0264] gi|261748451|gb|EEY35831.1| arginine--tRNA ligase [Leptotrichia goodfellowii F0264] Length = 575 Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 137/599 (22%), Positives = 257/599 (42%), Gaps = 93/599 (15%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 ++ I+ TN A+I S+ + +P IA I + + + +D I GF+N Sbjct: 26 KVEIQYSSKKEFADFQTNFALINSKIIEKNPREIAAEIADKFEDNDIIDKFEITDPGFLN 85 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNL--IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 +Y+ S KI+ + I G+ + I K I++ S N MH+GH R ++GD Sbjct: 86 IYIKNS---KIIEEL--KKIGEGKYIFPIDTSKKTIIDYSSPNIAKRMHIGHLRSTIIGD 140 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLK 207 +L ++ + G++V + ++ D G+ L + W ++ N P G +Y+K Sbjct: 141 SLKRILEYVGFKVLGDNHLGDWGSHFGKLIVGCNKWLDEEEYKKN----PIGELERIYIK 196 Query: 208 HVGK-------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 + E++ K E L +++ + + K++ V+ +K LN++ D++ Sbjct: 197 FSDEAQLNPELEVSAKEEWEKLKARDKENVKLWKNF-VKCSLKEFEKVYNILNVKFDMYN 255 Query: 261 SEDDFHRGDPSPIRDIIDNLARQ--GYVYEGILPP--PKSKTTQKCDMDRKQLLFRSTMV 316 E + P +I+++L + + +G+L K + C + RK Sbjct: 256 GESFYAEMIP----EILESLKNKKIAVLDDGVLTVYFAKEEKITPCILQRK--------- 302 Query: 317 GDDVDRPLLKSDGSY-TYFAADLAYFKCKYE-RGFDNMIYVMGS---DHSGYVKRLEAVA 371 DG+Y +Y + DLA K + + +N IYVM +H V ++ +A Sbjct: 303 -----------DGNYISYPSTDLATIKYRKDVLNIENAIYVMDERPKEHFRQVFKISEMA 351 Query: 372 A---AVSEKKAQINVLLCE--LVRLYRDGMPIKM-------SKRAGDFITLRH------- 412 A + ++ E ++ +G I++ K A I LR+ Sbjct: 352 GKEYAYEKTHVWFGIMRFEDDIISSATEGNNIRLINILEQAVKEAEKIIDLRNPDLSEKE 411 Query: 413 ---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 + VG +V++ L + + F + KV +EN Y+QY Y R SIFR+ K Sbjct: 412 KKEIGKIVGIGAVKYFDLSQNRMTPISFSWDKVL-NFEENTSPYLQYTYVRIMSIFRKIK 470 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 + ++D++ R + F+ E +L L ++P + A A +P +A YL++ A Sbjct: 471 E--NNIDYNKNYRQI---SENFNGEERELATALLKFPYSVMKACEAYKPNLIADYLFETA 525 Query: 530 SVFHGHWSHG---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +F+ ++ +E + RF M+L L A II GL ++G++ M Sbjct: 526 KIFNTFYATESILKEEDKSRF---------YMKLLLAEKTAYIIKEGLQLLGIDVVERM 575 >gi|290475235|ref|YP_003468121.1| arginine tRNA synthetase [Xenorhabdus bovienii SS-2004] gi|289174554|emb|CBJ81348.1| arginine tRNA synthetase [Xenorhabdus bovienii SS-2004] Length = 576 Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 140/596 (23%), Positives = 245/596 (41%), Gaps = 109/596 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ +G+ P +AE +++++ + + IAG GFIN++L +++ + Sbjct: 37 GDYQANGVMAAAKKVGMPPRQLAEKVISQLDLQGIASKIEIAGPGFINIFLDKAWIAANI 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + + + G + T V I++ + N MHVGH R ++GD A + F G++V Sbjct: 97 ET-ALKDEKLGITPVEPQTIV-IDYSAPNVAKQMHVGHLRSTIIGDAAARTLEFLGHKVI 154 Query: 163 REYYINDAGAQI---------------NTLALS---VFWRYQQALYNNDSDLPEGYYPGV 204 R ++ D G Q N +AL+ F+R + Y+ D + V Sbjct: 155 RANHVGDWGTQFGMLIAYLEKIQNEDANDMALADLEAFYREAKKHYDEDEEFAIRARNYV 214 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 V + D+Y E+ W +V Q R L + D+ + E Sbjct: 215 ----VKLQGGDEYCREM-------WRKLVDITMSQNQQTYNR--LNVTLTEKDV-MGESL 260 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 ++ P I+ +L ++G KS +D F++ G+ + + Sbjct: 261 YNDMLPG----IVADLKQRGIAV-------KSDGATVVYLDE----FKNKE-GEPMGVII 304 Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383 K DG Y Y D+A K ++E ++Y S ++ + A A+ K I Sbjct: 305 QKKDGGYLYTTTDIACAKYRHETLNASRVLYYTDSRQHQHLMQ----AWAIIRKTGYIPA 360 Query: 384 -LLCEL----VRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 +L E + L +DG P K RAG + L ++DE Sbjct: 361 SMLLEHHMFGMMLGKDGKPFKT--RAGGTVRLSDLLDEAIERADTLIREKNPDMPEDELK 418 Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VG +V++ L + + FD+ + + N Y+QYAY R SIF++A Sbjct: 419 KIVEAVGIGAVKYADLSKSRTTDYVFDWDNML-AFEGNTAPYMQYAYTRVSSIFKRA--- 474 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE--PYKLAFYLYDLA 529 D+D + V+ E E L L ++ I T+A+E P+ + YLYDLA Sbjct: 475 --DIDENNLTLPVMLNEER----EQALATRLLQFEETI--TTVAREGTPHVMCAYLYDLA 526 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +F G + H + A++ +L RL+L A + GL+ +G+++ M Sbjct: 527 GLFSGFYEH------CPILNADSEELRQSRLKLALLTAKTLKQGLDTLGIQTVERM 576 >gi|157373673|ref|YP_001472273.1| arginyl-tRNA synthetase [Shewanella sediminis HAW-EB3] gi|189083550|sp|A8FQM2|SYR_SHESH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|157316047|gb|ABV35145.1| Arginine--tRNA ligase [Shewanella sediminis HAW-EB3] Length = 581 Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 139/605 (22%), Positives = 234/605 (38%), Gaps = 102/605 (16%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 R+ ++R +D HG +TN AM+L++ +P +A+LI+ + D V V IAG GFIN Sbjct: 29 RVQVDRTKDKTHGDFATNLAMMLTKVARKNPRELAQLIIDSLPQDSQVAKVEIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 ++ + L L + ++ G L T V +++ S N MHVGH R ++GD++ Sbjct: 89 FFIDENALASQLMA-ALNDDHLGIQLPEPQTVV-VDYSSPNLAKEMHVGHLRSTIIGDSV 146 Query: 151 ASLMAFSGYEVTREYYINDAG--------------------AQINTLALSVFWRYQQALY 190 + F G+ V R+ ++ D G AQ+ L F+R + + Sbjct: 147 VRALEFQGHNVIRQNHVGDWGTQFGMLLAYMEELRAENGEQAQMELSDLETFYRAAKVRF 206 Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR---- 246 + D V G E +K E + + + V K +R Sbjct: 207 DESEDFAIRARKLVVSLQSGDEYCNKLWREFNDISLSHCHDVYERLGVSLTRKDVRGEST 266 Query: 247 --DDLKAL--NIQHDIFISE---------DDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 DDL+ + ++ +SE D+F D P+ II A GY+Y Sbjct: 267 YNDDLEQVVKDLDAKGLLSESNGAKVVFQDEFKTKDGDPLPVIIQK-ADGGYLY------ 319 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDD-----VD-------RPLLKSDGSYTYFAADLAYF 341 D + +RS ++ D VD + + K + + D++ Sbjct: 320 --------ATSDLAAMRYRSNVLKADRALYFVDLRQGLHFQQVFKLARTAEFINPDMSL- 370 Query: 342 KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401 GF M G D + R V V + + + ELVR M Sbjct: 371 ---EHMGFGTM---NGDDGRPFKTRSGGVVKLV-DLLTEADTRALELVRSKNPDM----- 418 Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461 D L + VG SV++ L + + F F ++ + N Y+ YAY R Sbjct: 419 ----DQAELEKIAKVVGISSVKYADLSKNRASDYIFSFEQMLS-FEGNTAPYLLYAYTRV 473 Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYK 520 IF++A DI ++ + + D E L LA++ V+ +P+ Sbjct: 474 AGIFKRATDI-----------DLSDAKMQLDHDKEKDLGNKLAQFGEVLSRMVTKGQPHA 522 Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 L YL++LA F + + A + + RL L A + GL+++G+E Sbjct: 523 LCGYLFELAGAFSSFYE------ACPVLAAESEEQKKSRLLLSQLTAKTLKQGLDLLGIE 576 Query: 581 SPNEM 585 + M Sbjct: 577 TLERM 581 >gi|307130871|ref|YP_003882887.1| arginyl-tRNA synthetase [Dickeya dadantii 3937] gi|306528400|gb|ADM98330.1| arginyl-tRNA synthetase [Dickeya dadantii 3937] Length = 576 Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 134/609 (22%), Positives = 240/609 (39%), Gaps = 115/609 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ LG+ P +AE ++ +++D IAG GFIN++ Sbjct: 27 MVRQSAKAQFGDYQANGIMAAAKKLGMAPRQLAEKVLQTLQLDGIAAKTEIAGPGFINIF 86 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L+P +L L ++ + G + + T V +++ + N MHVG+ R ++GD Sbjct: 87 LAPQWLSGQLEH-ALTAPKLGVSAVEPQTIV-VDYSAPNVAKEMHVGNLRSTIIGDASVR 144 Query: 153 LMAFSGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDS 194 + F G+ V R ++ D G Q L L F+R + Y++D+ Sbjct: 145 TLEFLGHNVIRANHVGDWGTQFGMLIAHLEDVQNGNTSDLELADLEAFYREAKKHYDDDA 204 Query: 195 DLPE---GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251 E GY V + D+Y + W +V VQ R + Sbjct: 205 VFAERARGYV-------VKLQSGDEYCRSM-------WRKLVDITMVQNQRSYDRLN--- 247 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 +++ + + E ++ P +I+ +L +G E S+ +D + Sbjct: 248 VSLTPNDVMGESLYNAMLP----EIVADLKAKGLAVE-------SEGAIVVYLDEYK--- 293 Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY------- 363 G+ + + K DG Y Y D+A K +YE+ G ++Y + S + Sbjct: 294 --NKEGEAMGVIIQKKDGGYLYTTTDIACAKYRYEKLGASRVLYYIDSRQHQHLMQAWSI 351 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------- 416 V++ V +VS + ++L +DG P K RAG I L ++DE Sbjct: 352 VRKAGYVPESVSLEHHMFGMMLG------KDGKPFK--TRAGGTIKLSELLDEAYERALT 403 Query: 417 --------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456 V +V++ L + + FD+ + + N Y+QY Sbjct: 404 LIAGKNPEMERGELEQLAQVVSVGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQY 462 Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 AY R SIF++A L P + + E L L ++ + Sbjct: 463 AYTRVSSIFKRAGVEEASLT---QPITLTAEH------EQALATRLLQFEETVTTVARDG 513 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 P+ + YLYDLA +F G + + + A+N RL+L A + +GLN Sbjct: 514 TPHVMCAYLYDLAGLFSGFYEN------CPILNADNDGTRQSRLKLALLTAKTLKTGLNT 567 Query: 577 IGVESPNEM 585 +G+++ +M Sbjct: 568 LGIQTVEKM 576 >gi|241121693|ref|XP_002403306.1| arginyl-tRNA synthetase, putative [Ixodes scapularis] gi|215493415|gb|EEC03056.1| arginyl-tRNA synthetase, putative [Ixodes scapularis] Length = 662 Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 137/596 (22%), Positives = 248/596 (41%), Gaps = 102/596 (17%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G NAAM LS+ L + P+ +A+ IVA + + V + +AG GFIN+ LS SY Sbjct: 116 GDYQCNAAMPLSQALKKAGKPMSPVEVAKRIVAEVPANDVVAEMSLAGPGFINVTLSGSY 175 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + I+ G+ G +V ++ S N MHVGH R ++G++L+ L+ F Sbjct: 176 VAASARRILTDGV-LPPPQAGPRKRVIVDLSSPNIAKEMHVGHLRSTIIGESLSRLLEFV 234 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217 G++V R ++ D G Q L + R+ L ++ P G Y KE ++ Sbjct: 235 GHDVLRLNHVGDWGTQFGMLIAHLKDRFPDYLVHSP---PIGDLQAFY-----KESKVRF 286 Query: 218 SSELLNFPEEKWLPIVK----DYSVQAMMKII----RDDLKALNIQHDIFISEDDFHRGD 269 S+ F + + +VK D + + K+I R + + + + D+ + E RG+ Sbjct: 287 DSDE-EFKKRAYACVVKLQSHDPDMMSAWKLICDVSRQEFQKIYERLDVSLIE----RGE 341 Query: 270 P---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 + +++ +L +G++ E D ++++F G V ++K Sbjct: 342 SFYQDMMTEVVKDLDERGFLEED---------------DGRKVMFGP---GQPVPLTVVK 383 Query: 327 SDGSYTYFAADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAA---VSEKKAQI 381 SDG +TY +D+A + + ER D ++YV + + + + A A V K ++ Sbjct: 384 SDGGFTYDTSDMATIRHRVQQERA-DWIVYVTDAGQAQHFNTIFACAKKAGYVDTSKVRL 442 Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441 + + +V L D K R+GD + L ++DE S++ + + L + + Sbjct: 443 DHCVFGVV-LGEDKK--KFKTRSGDTVKLTDLLDEGLRRSLQKLHEKEREKVLTPEELKR 499 Query: 442 VKE----------------------------QSKENPVFYVQYAYARCRSIFRQAKDIFP 473 +E + N Y+ YA R RSI R Sbjct: 500 AQEAVAYGCIKYADLSHNRVHEYVFSFDRMLDDRGNTAAYLLYALTRIRSIARNV----- 554 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 + D +P E E +L L +P VI + L YL++L+ F Sbjct: 555 GMSVDALKDEEVPVEH---PKERKLAKTLLRFPEVISTMLEELHVHPLCDYLFELSQTFS 611 Query: 534 GHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + ++ + V+ N RL L A A+++ G +I+G+++ M Sbjct: 612 EFYDNCYCIEKDKATGQVVKVNK-----GRLLLCEATAAVMTKGFHILGIKTVERM 662 >gi|19703841|ref|NP_603403.1| arginyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|23822190|sp|Q8RG14|SYR_FUSNN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|19713995|gb|AAL94702.1| Arginyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 569 Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 134/581 (23%), Positives = 246/581 (42%), Gaps = 88/581 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AMI S+ +G +P IAE + ++ + +AG GFIN++LS Y I Sbjct: 39 GDYQCNFAMINSKIIGDNPRKIAEEVKNNFPYGDVIEKLEVAGPGFINIFLSDKY---IS 95 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 +SI G +Y + + + KV I+F S N MH+GH R ++G++++ + F GY+V Sbjct: 96 NSIKKIGEDYDFSFLNRKGKVIIDFSSPNIAKRMHIGHLRSTIIGESISRIYRFLGYDVV 155 Query: 163 REYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGK-----ELADK 216 + +I D G Q L + W ++A N + E VY+K + L D Sbjct: 156 ADNHIGDWGTQFGKLIVGYRNWLDKKAYKKNAIEELE----RVYVKFSDEAEKDPSLEDL 211 Query: 217 YSSEL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274 +EL + EE+ + K++ ++ +K K L++ D + E ++ ++ Sbjct: 212 ARAELKKVQDGEEENTKLWKEFITES-LKEYNKLYKRLDVHFDTYYGESFYNDMMADVVK 270 Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334 +++D + D K LF + K DG+Y Y Sbjct: 271 ELVDKKI-----------AVDDDGAKVVFFDEKDNLFPCI---------VQKKDGAYLYS 310 Query: 335 AADLAYFKC-KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393 +D+A K K + MIY+ + + K+ + + + ++ ++R + Sbjct: 311 TSDIATVKFRKNTYDVNRMIYLTDARQQDHFKQFFKITDMLGWNIEKYHIWFG-IIR-FA 368 Query: 394 DGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMM 426 DG+ +S R G+ I L ++DE VG SV++ Sbjct: 369 DGI---LSTRKGNVIKLEELLDEAHSRAYDVVNEKNPNLSEGEKQNIAEVVGVSSVKYAD 425 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 L + + F++ K+ + N Y+ Y YAR +SI R+ +L+ L I Sbjct: 426 LSQNKQSDIIFEWDKML-SFEGNTAPYLLYTYARIQSILRKV----AELNIGLNENIEIK 480 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 E++ + S L +L +P + A +P +A YLY+L+ + +++ P L Sbjct: 481 TENKIEKS---LATYLLAFPISVLKAGETFKPNLIADYLYELSKKLNSFYNNC---PIL- 533 Query: 547 FVQANNRKLTMM--RLQLVHAVASIINSGLNIIGVESPNEM 585 N+ + + R L+ ++ GL ++G+ N+M Sbjct: 534 -----NQDIETLKSRALLIKKTGEVLKEGLELLGIPILNKM 569 >gi|325969563|ref|YP_004245755.1| arginyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28] gi|323708766|gb|ADY02253.1| arginyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28] Length = 643 Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 137/579 (23%), Positives = 245/579 (42%), Gaps = 108/579 (18%) Query: 87 GFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 G++N+ ++ Y +LS+I +YG + + IE SANP PMH+GH R AV Sbjct: 81 GYLNIDINIRDYANIVLSTINSLSDKYGISEKCPSSSYIIEHTSANPAKPMHIGHGRNAV 140 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGV 204 +GD+LA L+ F G V +Y+ND G Q+ + + + L N+ P+ + Sbjct: 141 LGDSLARLLRFCGASVRVHFYVNDCGDQMPYVGIGYYVAKDLVLNRVNNGWKPDDVMGII 200 Query: 205 Y--------LKHVGKELADKYSSE-------LLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249 Y +K + K++ +++ SE L ++W+ ++ ++ ++ ++ L Sbjct: 201 YSVTYAVSEIKRLSKQI-EQFKSEGKYEDANKLISERDEWISVINNF-MERDKELTETLL 258 Query: 250 KALNIQHDIFISEDDFHR----GDP---SPIRDIID--------NLARQGYVYEG----- 289 K L D+ + + R GD IR+ +D L R G ++ Sbjct: 259 KGLGKFEDLPLMVKQWSRAYEEGDEFVRKVIREAVDIVLKGFRITLDRLGISFDSWDFES 318 Query: 290 -----------ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV-------------DRPLL 325 ++ K Q + D ++FR+ D+ LL Sbjct: 319 EVAVDNGGTSRVINELLRKVPQYVERDDGAVVFRADKYAQDLGLWNELKLPKYIPKATLL 378 Query: 326 KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 +SDG+ Y D+AY ++ FD +I V+GS+ + +L+ A+ ++ Sbjct: 379 RSDGTSLYLTRDIAYALWFWDNFKFDRLIRVIGSEQAHPQAQLKLALHAMGYHDLARKLI 438 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------VGSD 420 + GM KMS R G +I+L +++E V + Sbjct: 439 HYSYEMVNLAGM--KMSGRKGVYISLDELLNEAKDRIMEIVKNRFSPDEANRVAEAVATG 496 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 ++R+ L ++ L F + KV K+N +VQY Y R I +A +I P L Sbjct: 497 AIRYSFLSVSPNKPLTFSWDKVL-NLKQNSGPFVQYTYVRTNGILEKAGEI-PKLT--QI 552 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 P N+ +E E LI+ L EYP VI A + Y+ L+ VF+ ++ Sbjct: 553 PNNIAGEERE-------LILLLGEYPEVIARAAQELRLENIIEYVNKLSLVFNSYYE--- 602 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 + P L +A R+ R+ LV+A+ +++ + + I+G+ Sbjct: 603 KYPVLN-AEAGIREF---RINLVNAMRTVLGNAMGILGI 637 >gi|163847584|ref|YP_001635628.1| arginyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl] gi|222525439|ref|YP_002569910.1| arginyl-tRNA synthetase [Chloroflexus sp. Y-400-fl] gi|229558751|sp|A9WEH7|SYR_CHLAA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|254782952|sp|B9LGY2|SYR_CHLSY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|163668873|gb|ABY35239.1| arginyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl] gi|222449318|gb|ACM53584.1| arginyl-tRNA synthetase [Chloroflexus sp. Y-400-fl] Length = 574 Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 145/626 (23%), Positives = 255/626 (40%), Gaps = 107/626 (17%) Query: 11 LKNYLKEIDCKIKVEKKI---LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 L+ ++ +I I K+ L I +P A T A ++ LG+DP+ +A Sbjct: 5 LERFISDIQAAIVATGKVPADLIEITTPKPNIPADRTFVTFKA---AKALGVDPVRLAAD 61 Query: 68 IVARIKIDPD--VDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVN 124 + I PD + V G F+N L P L +++ I G YG G V Sbjct: 62 LATAIVPPPDSLIGEVTATG-AFLNFTLHPQRLAAAVMAEIETYGDAYGSVADGANRTVV 120 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 I++ S N MHVGH R ++G L + GY V + ++ D G Q + L+ R Sbjct: 121 IDYSSPNIAKRMHVGHIRSTIIGQALVHIFRALGYRVIGDNHLGDWGTQFGII-LAAMQR 179 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP-----EEKWLPIVK--DYS 237 Y + ++ + E + L +Y++E+ + P +W ++ D + Sbjct: 180 YGRPQNEGEAAMAEL-----------EALYARYNAEMKDNPPLEDEARRWSLALEQGDPT 228 Query: 238 VQAMMKIIRD-DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 + + + D ++A +D D+ G+ YE +LP Sbjct: 229 ARELWQWCVDLTMRAAQRNYDRLGVRFDYAYGES---------------FYEAMLPGVIE 273 Query: 297 KTTQKCDMDRKQLLFRSTMVG--DDVDRPLL-KSDGSYTYFAADLAYFKCKY-ERGFDNM 352 + Q R +V D + R ++ +SDG Y D+A K + E ++ Sbjct: 274 EALQSGAAFRD---VDGAVVAELDKLPRFIVQRSDGGTVYITRDIATIKFRLQEFNPSHI 330 Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL---VRLYRDGMPIKMSKRAGDFIT 409 IYV+ + + ++L A+ A+ ++V L + V DG P +S + G+ + Sbjct: 331 IYVVDARQELHFRQLFAIVRAMGYA---LDVELIHVPFGVITTPDGQP--LSTKKGNMVY 385 Query: 410 LRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442 L ++D+ VG +V + L++ + D+ ++ Sbjct: 386 LESLLDDAVARARALVDAKSPTLSPEERAQIAEAVGIGAVIYNDLYQDPRRNITLDWDRM 445 Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLI 499 + N Y+QY++ARCRSI R+A + + ++D L SE +L+ Sbjct: 446 L-SIEGNSAAYLQYSHARCRSILRRAAEEGMLSTEVDPGLLTH----------PSEQRLV 494 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 HLA P + A P+ +A + Y A F + + P LR A L R Sbjct: 495 RHLARLPEAVREAGARYAPFVIADWCYTTAREFGIFFE---QCPVLR---AETPALRAAR 548 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 LQLV A A+ + +GL ++G+++P M Sbjct: 549 LQLVSATANALRNGLALLGIQAPERM 574 >gi|219871399|ref|YP_002475774.1| arginyl-tRNA synthetase [Haemophilus parasuis SH0165] gi|219691603|gb|ACL32826.1| arginyl-tRNA synthetase [Haemophilus parasuis SH0165] Length = 548 Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 127/580 (21%), Positives = 229/580 (39%), Gaps = 78/580 (13%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LGL+P A+ +V + ++ + + IAG GFIN++L+P++L + Sbjct: 10 GDYQANGIMGAAKKLGLNPREFAQKVVDNVDLNGIAEKLEIAGPGFINIFLAPTWLAQQT 69 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + SG + G NL + V +++ S N MHVGH R ++GD + + F G +V Sbjct: 70 EN-AFSGDKLGINL-NQAQTVVVDYSSPNVAKEMHVGHLRSTIIGDGVVRALEFLGNKVI 127 Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204 R ++ D G Q L L F+R + Y++D E V Sbjct: 128 RANHVGDWGTQFGMLIAYLEKMENEHASEMELSDLEAFYRTAKEHYDSDEVFAEKARNYV 187 Query: 205 YLKHVGKELADKYSSELLNFPEEKWL-------------PIVKDYSVQAMMKIIRDDLKA 251 G + +L+N ++ ++ + M+ I DLKA Sbjct: 188 VKLQSGDDYCRTMWKKLVNITMQQNQHNYNRLNVTLTENDVMGESLYNPMLPEIVADLKA 247 Query: 252 --LNIQHD--IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307 L ++ D + + D+F D P+ I+ G++Y + DR Sbjct: 248 QGLAVEDDGALVVFLDEFKNKDGDPMGVIVQK-KDGGFLYTTTDIAAAKYRFETLKADRA 306 Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367 L+F T + + L Y + N ++G D + R Sbjct: 307 -LVFSDTRQSQHMQQAWL--------ITRKAGYVPDSFSLEHHNFGMMLGKDGKPFKTRT 357 Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL--RHVVDEVGSDSVRFM 425 V L +L+ + ++++ D + VV+ V +V++ Sbjct: 358 GGT------------VKLADLLDEAVERAEKLIAEKNPDLTACEKQAVVEAVAIGAVKYS 405 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 L + + FD+ + + N Y+QYAY R RSIF +A +D + N++ Sbjct: 406 DLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRVRSIFSRA-----GIDPNSLTANIV 459 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 D E L + L ++ + P+ L YLY+LA +F + P L Sbjct: 460 L----IDEKERNLAIKLLQFEEAVTVVAKDGTPHVLCQYLYELAGIFSSFY---EACPIL 512 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + RL+L H A + GL+++G+++ +M Sbjct: 513 NAEES----IKQSRLKLAHLTAKTLKQGLDLLGIKTVEKM 548 >gi|269103063|ref|ZP_06155760.1| arginyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP 102761] gi|268162961|gb|EEZ41457.1| arginyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP 102761] Length = 576 Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 134/608 (22%), Positives = 233/608 (38%), Gaps = 133/608 (21%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG +P A+ ++ + + + V IAG GFIN++L+ +L Sbjct: 37 GDYQANGVMGVAKQLGTNPREFAQKVIDNLDLGEMAEKVEIAGPGFINIFLNKQWL---- 92 Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 ++ + R + K + I ++ + N MHVGH R ++GD + + F G+ Sbjct: 93 AARAEEALNDDRLSVAKEKEQTIVVDYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHN 152 Query: 161 VTREYYINDAGAQ-------------------INTLALSVFWRYQQALYNNDSDLPEGYY 201 V R ++ D G Q +N L F+R + LY+ D + E Sbjct: 153 VIRANHLGDWGTQFGMLIANMVRKEQDGSDVSMNISDLEGFYRESKVLYDEDPEFAETAR 212 Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ--HDIF 259 V G E + EKW + V+ +K + + LN+ + Sbjct: 213 NYVVRLQSGDE-----------YCHEKWKQL-----VEITLKQNQRNYDRLNVSLTDENV 256 Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEG------ILPPPKSKTTQKCDMDRKQLLFRS 313 + E ++ P I+ +L +G E L K+K Sbjct: 257 MGESMYNEMLPG----IVADLKEKGLAVEDDGAVVVFLDEYKNKD--------------- 297 Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VK 365 G+ + + K DG Y Y D+A K +YE+ D ++Y + S + V+ Sbjct: 298 ---GEPMGVIIQKRDGGYLYTTTDIACAKYRYEKLHADRVLYFIDSRQHQHLMMAWSIVR 354 Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425 + V +VS + ++L +DG P K RAG + L ++DE + + Sbjct: 355 KAGYVPESVSLEHHAFGMMLG------KDGRPFKT--RAGGTVRLADLLDEAQERANK-- 404 Query: 426 MLWRKNSEL-----------LDFDFCKVKEQSKE-----------------NPVFYVQYA 457 ++ KN EL + K + SK N Y+QYA Sbjct: 405 LIEEKNPELSAEEKAEIANTVAMAAVKYADLSKHRTTDYIFDWDNMLAFEGNTAPYMQYA 464 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 Y R SIF++A DL + D E L+ L ++ ++ Sbjct: 465 YTRVASIFKRAGVELADLTHPIIIT---------DEKEQALLSKLLQFEEAVQTVAREGH 515 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 P+ + YL++LA F + P L ++ RL+L H A I GL+++ Sbjct: 516 PHVMCNYLFELAGTFSSFYE---ACPILN----AEEEVKQSRLKLAHLTAKTIKQGLDLL 568 Query: 578 GVESPNEM 585 G+++ + M Sbjct: 569 GIKTLDRM 576 >gi|327463447|gb|EGF09766.1| arginine--tRNA ligase [Streptococcus sanguinis SK1057] Length = 562 Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 142/600 (23%), Positives = 246/600 (41%), Gaps = 110/600 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E+P+ G ++ A L++ P IA I +I D V G ++N + Sbjct: 26 LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIAADIAEKIDT-AHFDKVVATGP-YVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 LS + + +++ ++ G +YG+ G + I+ S N P VGH R V+GD L+ Sbjct: 83 LSKAEISGQVIKEVIKDGADYGQQNEGNNQNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY + ++ D G Q L ++ W Q+A+ N P +Y++ + Sbjct: 143 NIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKWGSQEAVEAN----PIDELLKLYVR-IN 197 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 E+ + S L+ W ++D +A + + RD+ L N +++ E D Sbjct: 198 AEIENDPS---LDEEGRLWFKKLEDGDPEATELWQWFRDESLTEFNRIYELLGVEFDSLN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323 G+ + + I L +G + E SK D+ +D + P Sbjct: 255 GEAFYNDKMDEGIQILEEKGLLQE-------SKGASIVDL-------------EDFNLPP 294 Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374 + KSDG+ Y D+A Y Y F +YV+G + + + ++L+AV + Sbjct: 295 AMIKKSDGATLYITRDIATAIYRARTY--NFVKNVYVVGQEQANHFRQLKAVLKKMGFDW 352 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 S+ ++ L R K+S R G+ I L + E Sbjct: 353 SDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLLEAISRAKSQIEAKNPDLEN 405 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG +V+F L DFD V + + P Y+QYAYAR +SI R+A Sbjct: 406 KEAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQSILRKA 463 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 F + S D ++I L ++ RV++ A EP +A Y L Sbjct: 464 N----------FQPDAEATYSLNDPESWEIIKLLQDFGRVVKRAADNYEPSLIAKYAISL 513 Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A F+ +++H R E+P RL L ++ A ++ L ++GVE+P +M Sbjct: 514 AQAFNKYYAHTRILDESPERD-----------SRLALSYSTAVVLKEALRLLGVEAPEKM 562 >gi|291525263|emb|CBK90850.1| arginyl-tRNA synthetase [Eubacterium rectale DSM 17629] Length = 597 Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 133/609 (21%), Positives = 251/609 (41%), Gaps = 103/609 (16%) Query: 36 RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95 RP C N AM ++ P I++ + A ++ D +SV GF+N+ + Sbjct: 33 RPDLC---EFQCNGAMAAAKEYKCAPFMISDKVAALLESDEMFESVESVKPGFLNIKMDT 89 Query: 96 SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155 ++L K ++ + YG K + +++ N P+HVGH R AV+G+++ + Sbjct: 90 AFLAKYMNDMKDDEGRYGLEKAKKPLTIVVDYGGPNVAKPLHVGHLRSAVIGESVKRIAK 149 Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP-----------GV 204 F G+ V + ++ D G Q+ + + R +Y ++S G YP + Sbjct: 150 FMGHNVIGDVHLGDWGLQMGLIITELRERKPDLVYFDES--YTGEYPKEAPFTISELEDI 207 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYS--VQAMMKIIRDDLK----ALNIQHDI 258 Y GK +D+ E ++ + Y + +M + DLK LN+ ++ Sbjct: 208 YPTASGKSKSDESFKEAALLATKELQGGRRGYQALLSHIMNVSVTDLKRNYENLNVHFEL 267 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVY--EGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 + E D P ++++ + +G+ + EG L K D D K++ Sbjct: 268 WKGESDAQPYVP----EMVEMMKEKGFAHMSEGALV-----VDVKEDTDTKEI------- 311 Query: 317 GDDVDRP---LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAA 372 P +LKSDG+ Y DLA + E D +IY+ + S + ++ A Sbjct: 312 ------PPCIILKSDGASLYSTTDLATLVMRMKENNPDRVIYLADARQSMHFIQVFRCA- 364 Query: 373 AVSEKKAQINVLLCELVRL------YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 +K I ELV + +DG P K R G + L +++ E+ + + + Sbjct: 365 ----RKTGIVPDTTELVHIGFGTMNGKDGKPFKT--RDGGVMRLEYLLKEIDDEMLNKIK 418 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVI 485 +K E L+ D + ++ +K + V+Y ++ +KD D+D F F N Sbjct: 419 ENQKEKENLNIDEAEAEQTAKTVALAAVKYGDLSNQA----SKDYIFDIDRFTSFEGNTG 474 Query: 486 P----------------QESEFDTSELQ-------------LIVHLAEYPRVIENATIAQ 516 P + D S L+ L++ LA++ IE+A Sbjct: 475 PYILYTIVRIKSILSKYEAKGGDISALKDAIMPAVNAGQKNLMLSLAKFNATIESAYEES 534 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 P+K+ Y+Y+LA+ F+G + + + N +L + L+ I+ + +++ Sbjct: 535 APHKICAYIYELANAFNGFYHD------TKILSEENEELKKSYISLLVLTKEILEACIDM 588 Query: 577 IGVESPNEM 585 +G +P+ M Sbjct: 589 LGFSAPDRM 597 >gi|241896416|ref|ZP_04783712.1| arginyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313] gi|241870396|gb|EER74147.1| arginyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313] Length = 561 Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 147/599 (24%), Positives = 263/599 (43%), Gaps = 111/599 (18%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID--PDVDSVFIAGKGFINL 91 IE P+D + G + +L++ + P IA IV+ I D +V +V ++N Sbjct: 27 IEVPKDASMGDYAF-PTFLLAKARRMAPQQIATNIVSEIATDGFKEVKAV----GPYVNF 81 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +L + + V+ +YG N G+ + I+ S N PM +GH R V+G++LA Sbjct: 82 FLDQAQFGADTLAEVLRQTDYGHNTDGEAGHITIDMSSPNIAKPMSMGHLRSTVIGNSLA 141 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYYPGVYLK-H 208 + +GY+ + ++ D G Q L +S + W ++ + + + YY + + Sbjct: 142 EIAKANGYQPIKINHLGDWGTQFGKL-MSAYKRWGSEEEVKADPINTLVKYYVRFHKEAE 200 Query: 209 VGKELADK---YSSELLNFPEEK---WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262 EL D+ + +L + EE W ++ S++ M++ D L+I D F E Sbjct: 201 TQPELNDEGRAWFKKLEDGDEEAHELW-SWFREESLKEFMELYND----LDIDFDSFNGE 255 Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322 ++ + +ID L + + E S+ Q D++ + L M+ Sbjct: 256 AFYN----DKMDAVIDTLKEKHLLVE-------SQGAQVVDLEDEGL--NVAMIQ----- 297 Query: 323 PLLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKK 378 ++DG+ Y DLA + K Y F +YV+G + + +++AV + E Sbjct: 298 ---RTDGATLYMTRDLAAAIFRKNNY--NFVKSLYVVGGEQREHFMQMKAVLKKMGYEWS 352 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV------------------------ 414 I + ++ + DG K+S R+G I L+ V+ Sbjct: 353 DDIEHIPFGMITV--DGK--KLSTRSGRIILLKDVLADSVKLATAQIDEKNPNLANKEVV 408 Query: 415 -DEVGSDSVRFMMLWRKNSELLDFDFCKVKE----QSKENPVFYVQYAYARCRSIFRQAK 469 EVG+ +V F L N L +FDF K++E + P YVQY AR +SI R+A Sbjct: 409 AHEVGTGAVVFHDL--MNERLGNFDF-KLEEVVRFEGDTGP--YVQYTNARAQSILRKAG 463 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 P+LD + I E ++T +L +A + ++ A +EP +A Y +LA Sbjct: 464 K--PELDLNNLS---IDDEQVWETEKL-----VASFNDIVRRAWRDREPSVIAKYSLNLA 513 Query: 530 SVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ ++++ + E+ +L RL LV AV+ ++ L ++GV++P EM Sbjct: 514 RAFNKYYANSKILVEDDQLN-----------ARLALVTAVSYVLTESLRLLGVKAPKEM 561 >gi|325686756|gb|EGD28782.1| arginine--tRNA ligase [Streptococcus sanguinis SK72] Length = 562 Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 142/600 (23%), Positives = 246/600 (41%), Gaps = 110/600 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E+P+ G ++ A L++ P IA I +I D V G ++N + Sbjct: 26 LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIAADIAEKIDT-AHFDKVVATGP-YVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 LS + + +++ ++ G +YG+ G + I+ S N P VGH R V+GD L+ Sbjct: 83 LSKAEISGQVIKEVIKDGADYGQQNEGNNQNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY + ++ D G Q L ++ W Q+A+ N P +Y++ + Sbjct: 143 NIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKWGSQEAVEAN----PIDELLKLYVR-IN 197 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 E+ + S L+ W ++D +A + + RD+ L N +++ E D Sbjct: 198 AEIENDPS---LDEEGRLWFKKLEDGDPEATELWQWFRDESLTEFNRIYELLGVEFDSLN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323 G+ + + I L +G + E SK D+ +D + P Sbjct: 255 GEAFYNDKMDEGIQILEEKGLLQE-------SKGASIVDL-------------EDFNLPP 294 Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374 + KSDG+ Y D+A Y Y F +YV+G + + + ++L+AV + Sbjct: 295 AMIKKSDGATLYITRDIATAIYRARTY--NFVKNVYVVGQEQANHFRQLKAVLKKMGFDW 352 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 S+ ++ L R K+S R G+ I L + E Sbjct: 353 SDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLLEAISRAKGQIEAKNPDLEN 405 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG +V+F L DFD V + + P Y+QYAYAR +SI R+A Sbjct: 406 KDAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQSILRKA 463 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 F + S D ++I L ++ RV++ A EP +A Y L Sbjct: 464 N----------FQPDAEATYSLNDPESWEIIKLLQDFGRVVKRAADNYEPSLIAKYAISL 513 Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A F+ +++H R E+P RL L ++ A ++ L ++GVE+P +M Sbjct: 514 AQAFNKYYAHTRILDESPERD-----------SRLALSYSTAVVLKEALRLLGVEAPEKM 562 >gi|329296274|ref|ZP_08253610.1| arginyl-tRNA synthetase [Plautia stali symbiont] Length = 576 Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 135/588 (22%), Positives = 233/588 (39%), Gaps = 93/588 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG P +AE +V + + V IAG GFIN++L +L + Sbjct: 37 GDYQANGIMAVAKKLGQVPRQLAEQVVQHLDLAGIASKVDIAGPGFINIFLDRQWLAQQA 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + + G + + T V I++ + N MHVGH R ++GD + F G+ V Sbjct: 97 AQALQLP-RLGVSEVTPQTIV-IDYSAPNVAKEMHVGHVRSTIIGDAVVRTQEFLGHHVI 154 Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204 R ++ D G Q L L F+R + Y+ D E V Sbjct: 155 RANHVGDWGTQFGMLIAYLEKQQNEHHEDIALADLEAFYREAKRTYDEDEAFAERARGYV 214 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 G E +L++ + + +V + R D+ ++ +D+ Sbjct: 215 VKLQGGDEYCRAMWKKLVDITMSQNQQVYDRLNV----TLTRKDVMGESLYNDML----- 265 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 P I D+ + +G+ + T D + + G+ + + Sbjct: 266 -----PGIIADLRE---------KGLAVTSEGATVVFLDEFKNK-------EGEPMGVII 304 Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSE 376 K DG Y Y D+A K +YE D ++Y + S + V++ V +V Sbjct: 305 QKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLQQAWTIVRKAGYVPESVPL 364 Query: 377 KKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFIT----------LRHVVDEV 417 + ++L + R + R G IK+S +RA ++ L+ +V+ V Sbjct: 365 EHHAFGMMLGKDGRPFKTRSGGTIKLSDLLDEAVERAHALVSEKNPEMSAAELKELVEVV 424 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G +V++ L + + FD+ + + N Y+QYAY R S+FR+A ++ Sbjct: 425 GIGAVKYADLSKSRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA-----GIEA 478 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 D ++I D E L L ++ I P+ + YLYDLA +F G + Sbjct: 479 DSLRGDIILT----DEREALLATRLLQFEETITQVARDGTPHVMCAYLYDLAGLFSGFYE 534 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H P L + N R RLQL A + GL+ +G+++ M Sbjct: 535 H---CPILSAEEENVRN---SRLQLAALTAKTLKQGLDTLGIKTVERM 576 >gi|328675681|gb|AEB28356.1| Arginyl-tRNA synthetase [Francisella cf. novicida 3523] Length = 581 Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 149/637 (23%), Positives = 261/637 (40%), Gaps = 120/637 (18%) Query: 11 LKNYLKEIDCKIKVEKKI-----LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 ++N+L EI K V KK+ ++V D GH NAAM L++ P IA Sbjct: 3 IENHLSEIFAK--VFKKLGYVESFAKVVTSTREDV--GHFQCNAAMPLAKFAKKPPFVIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 E I+ I + + +A GFIN+ L+P +L I + + S ++G + KV + Sbjct: 59 EEIIEHIDAEDIFAKLEVAKPGFINITLAPKFLATITNKFLNS-TKFGAQNNSQSRKVVL 117 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 +F N PMHVGH R A++GD L + F + ++ D G Q+ L + Sbjct: 118 DFGGPNVAKPMHVGHIRSALLGDALQRIHRFYNDTAVSDVHLGDWGTQMGMLIEEIKLES 177 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKY---------------SSELLNFPEEK-- 228 + +Y +++ G YP V +ELA+ Y + L F ++ Sbjct: 178 PELVYFDEN--YTGEYPAESPVTV-QELAEIYPRASKRCKSDIDEMEKARLATFELQQGR 234 Query: 229 ------WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282 W VK S+ A ++ D L++ D+++ E D ++ + ++I Sbjct: 235 RGYVALWQHFVK-ISIDA----VKKDFDNLDVHFDLWLGESDANKF----VDEMISYFKA 285 Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL--LKSDGSYTYFAADLA- 339 ++YE D+ + + G PL +K DG Y DLA Sbjct: 286 NNFIYE----------------DQGAWVIDTNKDGIP---PLIVIKKDGGIMYGTTDLAT 326 Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA---AAVSEKKAQINVLLCELVRLY---- 392 ++ + D +IYV+ S + K++ +VA VSEK C+L + Sbjct: 327 LWQRSKDLDPDEIIYVVDKRQSLHFKQVFSVAERTKIVSEK--------CKLKHVAFGTV 378 Query: 393 --RDGMPIKMSK-----------RAGDFITLR-------HVVDEVGSDSVRFMMLWRKNS 432 +DG P K + +A ++ R ++++++ +++F L + Sbjct: 379 NGKDGRPFKTREGGVMHLADLISQAKEYAKKRMPDENDDNIINQIAMATIKFGDLVNNYA 438 Query: 433 ELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIF-PDLDFDLFPRN--VIPQE 488 FD K + + K P Y+ Y R +SI R+ IF + D ++ VI Sbjct: 439 NDYIFDLEKFAQHEGKTGP--YLLYTAVRAKSILRK---IFGENYDIGSLTKDYKVINAH 493 Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548 +E E +L + L ++P I+ A +P+ + Y Y LA+ F+ + + Sbjct: 494 NE---HEEKLQLQLIQFPIAIQRAYENSQPHHICEYAYSLANNFNKFYVN------CPIT 544 Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N+ L R+ L A + N++G+ P M Sbjct: 545 NLNDESLRKARIALCMATVKAMTIATNLLGISIPERM 581 >gi|90411614|ref|ZP_01219624.1| arginyl-tRNA synthetase [Photobacterium profundum 3TCK] gi|90327504|gb|EAS43857.1| arginyl-tRNA synthetase [Photobacterium profundum 3TCK] Length = 576 Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 134/603 (22%), Positives = 235/603 (38%), Gaps = 123/603 (20%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL---- 98 G N M +++ LG +P A+ ++ + +D + V IAG GFIN++L S+L Sbjct: 37 GDYQANGVMGVAKKLGTNPREFAQKVIDVLDLDGIAEKVEIAGPGFINIFLDKSWLAARA 96 Query: 99 -RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + E +N++ +++ + N MHVGH R ++GD + + F Sbjct: 97 EEALTDDRIGVAAEKQQNIV-------VDYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFL 149 Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDL-- 196 G+ V R +I D G Q L L F+R + LY+ D + Sbjct: 150 GHNVIRANHIGDWGTQFGMLIANLERVQNETGEVSMELADLEGFYRESKKLYDEDEEFAV 209 Query: 197 -PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255 G+ V + D+Y + + W +V VQ I D +++ Sbjct: 210 RARGFV-------VKLQSGDEYCAGM-------WKKLVDVTMVQNQ---INYDRLNVSLT 252 Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR--- 312 D + E ++ P +I+ +L +G E D Q++F Sbjct: 253 RDNVMGESMYNDMLP----NIVADLKEKGLAVES---------------DGAQVVFLDEY 293 Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA 371 GD + + K DG + Y D+A K ++E+ D ++Y + S ++ + ++ Sbjct: 294 KNKDGDPMGVIIQKRDGGFLYTTTDIACAKYRFEQLNADRVLYFIDSRQHQHLMQAWSIV 353 Query: 372 AAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430 ++ + + L +DG P K RAG + L ++DE S+ ++ K Sbjct: 354 RKAGYVPEEVTLEHHAFGMMLGKDGRPFKT--RAGGTVRLADLLDE--SEVRAAKLIEAK 409 Query: 431 NSEL-----------LDFDFCKVKEQSKE-----------------NPVFYVQYAYARCR 462 N EL + K + SK N Y+QYAY R Sbjct: 410 NPELEATEKDKIAKTVAMAAVKYADLSKHRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVA 469 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 SIF++A DL + D E L+ L ++ + N + +P+ + Sbjct: 470 SIFKRADVNLADLTHPIVIN---------DEKEQALLSTLLQFEEAVLNVSREGQPHLMC 520 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 YL++LA F + P L +A + RL+L A I GL+++G+E+ Sbjct: 521 TYLFELAGKFSSFYEAC---PILNAEEA----VKQSRLKLALLTAKTIKQGLDLLGIETL 573 Query: 583 NEM 585 M Sbjct: 574 ERM 576 >gi|261377586|ref|ZP_05982159.1| arginine--tRNA ligase [Neisseria cinerea ATCC 14685] gi|269146334|gb|EEZ72752.1| arginine--tRNA ligase [Neisseria cinerea ATCC 14685] Length = 572 Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 127/589 (21%), Positives = 242/589 (41%), Gaps = 86/589 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 IV++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 IVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEALADNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P +L + + + ++ +G K V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRPEFLAQNIHA-ALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ F G V R+ ++ D G Q L + + + +DL + Y Sbjct: 144 RVLEFIGNTVVRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203 Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 AD + L +E L + K D S+ + D L ++ + E ++ Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323 ++ ++D+L ++G E D +++F G+ Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DGAKVVFLEEFKNKEGEPAAFI 302 Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVS----EKK 378 + K G + Y + DLA + + R D ++YV+ + + ++L + S + K Sbjct: 303 VQKQGGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKASYLPEDAK 362 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 A+ + + +DG P K R+GD + L ++ E Sbjct: 363 AE---FIGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAE 417 Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VG +V++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 418 KIGKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG-- 474 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 ++D V+ + E QL L ++ V+++ P+ LA YLY +A++ Sbjct: 475 ----EWDTTVPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATL 525 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 F + P L+ A RLQL + GL ++G++ Sbjct: 526 FSRFY---EACPILKSEGATRNS----RLQLAKLTGDTLKQGLELLGID 567 >gi|325132648|gb|EGC55334.1| arginyl-tRNA synthetase [Neisseria meningitidis M6190] gi|325138564|gb|EGC61127.1| arginyl-tRNA synthetase [Neisseria meningitidis ES14902] Length = 572 Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 122/586 (20%), Positives = 239/586 (40%), Gaps = 80/586 (13%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P +L + + + ++ +G + V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRPEFLAQNIQT-ALNDARFGIAKTDRPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++AF G V R+ ++ D G Q L + + + +DL + Y Sbjct: 144 RVLAFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKARFDEDP 203 Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 AD + L +E L + K D S+ + D L ++ + E ++ Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323 ++ ++D+L ++G E D +++F G+ Sbjct: 262 ----DDLQAVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302 Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 + K G + Y + DLA + ++ D ++YV+ + + ++L + + Sbjct: 303 VQKQGGGFLYASTDLACLRYRFGTLHADRLLYVVDHRQALHFEQLFTTSHKAGYLPENVG 362 Query: 383 VLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------- 416 + +DG P K R+GD + L ++ E Sbjct: 363 AAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIG 420 Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 VG +V++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 421 KTVGIGAVKYADLSKNRTSDYVFDWDAMLS-FEGNTAPYLQYAYTRVQSVFRKAS----- 474 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 ++D V+ + E QL L ++ V+++ P+ LA YLY +A++F Sbjct: 475 -EWDATAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSR 528 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + P L+ A+ RLQL + GL ++G++ Sbjct: 529 FY---EACPILKAEGASRNS----RLQLAKLTGDTLKQGLELLGID 567 >gi|329119396|ref|ZP_08248082.1| arginine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200] gi|327464541|gb|EGF10840.1| arginine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200] Length = 572 Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 135/591 (22%), Positives = 248/591 (41%), Gaps = 90/591 (15%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ G N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQPAKNADFGDYQINGVMGAAKQAKQNPRELAQKVADALAGNAVIESAQVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGD 148 L P +L + V + + R + K V I++ S N MHVGH R +++GD Sbjct: 85 RLRPDFL----AEHVQTALNDPRCGVAKKDTPQTVVIDYSSPNLAKEMHVGHLRSSIIGD 140 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 +++ ++ F+G V R+ ++ D G Q L + + + SDL + Y Sbjct: 141 SISRVLEFAGDTVIRQNHVGDWGTQFGMLVAYMVEQQKDNAAFELSDLEQFYRAAKVRFD 200 Query: 209 VGKELADKYSSEL--LNFPEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDD 264 AD + L +E L + + + ++ + + D L L + E Sbjct: 201 EDAAFADTAREYVVKLQGGDENVLKLWQQFVEISLGHAQAVYDTL-GLKLTPADVAGESK 259 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 ++ +++ +D+L RQG E +K + K+ G+ + Sbjct: 260 YN----PELQNTVDDLVRQGLAVE----DDGAKVVFLDEFKNKE--------GEPAAFIV 303 Query: 325 LKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381 K G + Y + DLA +Y G D ++YV+ + + ++L A S K + Sbjct: 304 QKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQL----FATSRKAGYL 357 Query: 382 -NVLLCELV----RLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416 + + E V + +DG P K R+GD + L ++DE Sbjct: 358 PDSVKAEFVGFGTMMGKDGRPFKT--RSGDTVKLVDLLDEAVERAAALVKEKNPDLGADD 415 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 VG +V++ L + + FD+ + + N Y+QYAY R +S+FR+A+ Sbjct: 416 AAKIAQTVGIGAVKYADLSKNRTSDYIFDWDAMLS-FEGNTAPYLQYAYTRVQSVFRKAE 474 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 + D L + +E QL + L ++ V+++A P+ LA YLY LA Sbjct: 475 EWDAAADLVL-----------TEPAEKQLALELLKFEDVLQSAADTGYPHYLAAYLYQLA 523 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 ++F + P L+ + R RLQL +I+ GL ++G+E Sbjct: 524 TLFSRFY---EACPILK-AEGTARN---SRLQLARLTGNILKQGLELLGIE 567 >gi|227485245|ref|ZP_03915561.1| arginine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172] gi|227236705|gb|EEI86720.1| arginine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172] Length = 565 Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 135/575 (23%), Positives = 232/575 (40%), Gaps = 97/575 (16%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIE 111 L++ L +P IA + + + ID D + G +IN +L + ++++I+ Sbjct: 46 LAKTLRKNPAQIAAELASTLVID-DFSEIKNVGP-YINFFLDRKKFENDVINAIIDKKEN 103 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG++ +GKG +EF S N P H+GH R V+GD L ++ F GY YI D G Sbjct: 104 YGKSDMGKGKTAIVEFSSVNIAKPFHIGHIRSTVIGDALRNIHEFLGYNTIATNYIGDYG 163 Query: 172 AQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230 Q T+ A W + L N P +Y+ +Y++E E Sbjct: 164 TQFGTMIAAYKLWGDDEKLNAN----PIKELLNLYV---------RYNTEASENEE---- 206 Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHD------IFISEDDFHRGDPS-PIRDI-IDNLAR 282 MM++ R + K L + + E F+ D + DI DN Sbjct: 207 ----------MMEVARKEFKNLEEGEEEATRLWSWFKEISFNEFDRVYKLLDIEFDNYKG 256 Query: 283 QGYVYEGILPP---PKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAA 336 + Y Y +P + + D Q++ + D P ++KS+GS Y Sbjct: 257 EAY-YSKYMPEILEELKEKKLLVESDGAQIIDLAQF-----DLPPSIIIKSNGSSAYITR 310 Query: 337 DLAY-FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA-----------------------A 372 D+A K E FD +YV+ + + + ++L + Sbjct: 311 DIATAINRKKEYNFDENLYVVATQQNLHFQQLWRILELMGYDLYKGCKHISFGMVSLKDQ 370 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 +S +K Q+ V L +++ + M R + V VG +V+F L+ Sbjct: 371 TLSTRKGQV-VFLEDVLNKAIEKTREIMENREDTVDDIGEVSRIVGIGAVKFQELYNNRI 429 Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA--KDIFPDLDFDLFPRNVIPQESE 490 + FD+ +V E YVQY YAR +S+ R+A +I P + E Sbjct: 430 KDYVFDWDEVLNFDGETGP-YVQYTYARAKSVLRKAGLGEIKP-----------LAIEKI 477 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550 E L+ LA + V+ A EP + +L D+A F+ ++ + + Sbjct: 478 TSDEEFSLVKKLAGFEDVVVKAKEKYEPSLVTRHLTDIAKSFNKFYNSSK-------IMV 530 Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + KL RL L +A + +I +GL ++G+++ +M Sbjct: 531 EDEKLKEERLALAYATSVVIKTGLGLLGIKTVEKM 565 >gi|148240672|ref|YP_001226059.1| arginyl-tRNA synthetase [Synechococcus sp. WH 7803] gi|166232850|sp|A5GP97|SYR_SYNPW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|147849211|emb|CAK24762.1| Arginyl-tRNA synthetase [Synechococcus sp. WH 7803] Length = 597 Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 144/596 (24%), Positives = 237/596 (39%), Gaps = 98/596 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98 G N A+ L++PL P IA IVA+++ DP + IAG GFINL + P L Sbjct: 47 GDFQANGALALAKPLKQAPRQIATAIVAQLQADPAFTDLCLEPQIAGPGFINLTVRPERL 106 Query: 99 RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158 +S+ + G + + V ++F S N MHVGH R ++GD+LA ++ F G Sbjct: 107 AAEVSA-RLGDQRLGVPAVEQAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRG 165 Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKY 217 + V R ++ D G Q L + AL D+ DL +L Y Sbjct: 166 HPVLRLNHVGDWGTQFGMLITHLKQVAPDALDTADAVDL--------------GDLVAFY 211 Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277 F +++ V + LKA + D S +F + I D + Sbjct: 212 REAKKRFDDDEAFQTTSREEVVKLQGGDPVSLKAWGLLCD--QSRREFQK-----IYDRL 264 Query: 278 D-NLARQGYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMVGDDVDRPL----LKSD 328 D L +G + P + ++ D Q +F + G D +PL KSD Sbjct: 265 DIRLNERGESFYNPFLPAVIDGLKDAELLVTDDGAQCVFLEGVQGKD-GKPLPVIVQKSD 323 Query: 329 GSYTYFAADLAYFKCKYERGFDN-----MIYVMGSDHSGYVKRLEAVA--AAVSEKKAQI 381 G + Y DLA + ++ D +IYV + + + + VA A + A++ Sbjct: 324 GGFNYATTDLAAIRYRFGAAPDGDDARRVIYVTDAGQANHFAGVFQVAQRAGWIPEGARL 383 Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------- 416 + LV+ DG K+ RAGD + LR ++DE Sbjct: 384 EHVPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVERAETDLRSRLNEEERSESEEFI 440 Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 VG +V++ L + F F ++ + N Y+ YA R I R+ D Sbjct: 441 QHVAGTVGLAAVKYADLSQNRITNYQFSFDRMLA-LQGNTAPYLLYAVVRIAGIARKGGD 499 Query: 471 IFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 + V+ + +F + E L+ L ++ VI P +L YL++L+ Sbjct: 500 L-----------EVLTGQLQFSEPQEWALVRELLKFDAVIAEVEEELLPNRLCSYLFELS 548 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 VF+ + + ++A+ L RL L A + SGL ++G+ + + M Sbjct: 549 QVFNRFYDQ------VPVLKADAEALP-SRLALCRLTADTLKSGLGLLGIPTLDRM 597 >gi|328944750|gb|EGG38911.1| arginine--tRNA ligase [Streptococcus sanguinis SK1087] Length = 562 Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 142/600 (23%), Positives = 246/600 (41%), Gaps = 110/600 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E+P+ G ++ A L++ P IA I +I D V G ++N + Sbjct: 26 LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIATDIAEKIDT-AHFDKVVATGP-YVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 LS + + +++ ++ G +YG+ G + I+ S N P VGH R V+GD L+ Sbjct: 83 LSKAEISGQVIKEVIKDGADYGQQNEGNNQNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY + ++ D G Q L ++ W Q+A+ N P +Y++ + Sbjct: 143 NIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKWGSQEAVEAN----PIDELLKLYVR-IN 197 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 E+ + S L+ W ++D +A + + RD+ L N +++ E D Sbjct: 198 AEIENDPS---LDEEGRLWFKKLEDGDPEATELWQWFRDESLTEFNRIYELLGVEFDSLN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323 G+ + + I L +G + E SK D+ +D + P Sbjct: 255 GEAFYNDKMDEGIQILEDKGLLQE-------SKGASIVDL-------------EDFNLPP 294 Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374 + KSDG+ Y D+A Y Y F +YV+G + + + ++L+AV + Sbjct: 295 AMIKKSDGATLYITRDIATAIYRARTY--NFVKNVYVVGQEQANHFRQLKAVLKKMGFDW 352 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 S+ ++ L R K+S R G+ I L + E Sbjct: 353 SDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLLEAISRAKSQIEAKNPDLEN 405 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG +V+F L DFD V + + P Y+QYAYAR +SI R+A Sbjct: 406 KDAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARVQSILRKA 463 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 F + S D ++I L ++ RV++ A EP +A Y L Sbjct: 464 N----------FQPDAEATYSLNDPESWEIIKLLQDFGRVVKRAADNYEPSLIAKYAISL 513 Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A F+ +++H R E+P RL L ++ A ++ L ++GVE+P +M Sbjct: 514 AQAFNKYYAHTRILDESPERD-----------SRLALSYSTAVVLKEALRLLGVEAPEKM 562 >gi|319637713|ref|ZP_07992479.1| arginyl-tRNA synthetase [Neisseria mucosa C102] gi|317400868|gb|EFV81523.1| arginyl-tRNA synthetase [Neisseria mucosa C102] Length = 572 Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 126/587 (21%), Positives = 243/587 (41%), Gaps = 82/587 (13%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEALADNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 LSP +L + + + ++ +G K V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLSPEFLAQNIQT-ALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ F G V R+ ++ D G Q L + + + +DL + Y Sbjct: 144 RVLEFMGNNVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203 Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 AD + L +E L + K D S+ + D L ++ + E ++ Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323 ++ ++D+L ++G E D +++F G+ Sbjct: 262 ----DDLQPVVDDLVQKGLAIED---------------DGAKVVFLDEFKNKEGEPAAFI 302 Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQ 380 + K G + Y + DLA + + R D ++YV+ + + ++L + A + A+ Sbjct: 303 VQKQGGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPEHAK 362 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416 + + + +DG P K R+GD + L ++ E Sbjct: 363 AEFIGFGTM-MGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAGKI 419 Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +V++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 420 GKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG---- 474 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 ++D V+ + E QL L ++ V+++ P+ LA YLY +A++F Sbjct: 475 --EWDATAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTVYPHYLAAYLYQIATLFS 527 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + P L+ A RLQL + GL ++G++ Sbjct: 528 RFY---EACPILKSEGATRNS----RLQLAKLTGDTLKQGLELLGID 567 >gi|156383395|ref|XP_001632819.1| predicted protein [Nematostella vectensis] gi|156219881|gb|EDO40756.1| predicted protein [Nematostella vectensis] Length = 588 Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 139/613 (22%), Positives = 251/613 (40%), Gaps = 111/613 (18%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGK 86 I+++ ++ G N+AM LS+ L +P IA+ I+A + + ++ V IAG Sbjct: 28 ILVQSTQNDKFGDYQCNSAMGLSQILKNNGQKANPQAIAKSIIASLPPNDLIEKVDIAGP 87 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GFIN++++ +++ IL +V +G+ I + ++F S N MHVGH R ++ Sbjct: 88 GFINVHMNKKFIKDILRDVVANGVH--PPAIRSRQRCIVDFSSPNIAKEMHVGHLRSTII 145 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQ 187 G+++ L+ + G++V R +I D G Q L L F++ + Sbjct: 146 GESICRLLEYVGHDVLRLNHIGDWGTQFGMLIAHLQDEFPDYLEKSPPIEDLQAFYKESK 205 Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247 L+++D + Y V G+ K W + + + R Sbjct: 206 TLFDSDEQFKKRAYERVVQLQQGEPNVRK-----------AW---------EMICDVSRK 245 Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM--- 304 + + L + + I E RG+ Y+ ++P K + Sbjct: 246 EFEKLYERLGVTIIE----RGES---------------FYQPMMPQLVELLESKGKVLVE 286 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY--ERGFDNMIYVMGSDHSG 362 D ++++F + G V ++KSDG YTY +DLA + + ERG D +IYV + SG Sbjct: 287 DGRKVVF---VEGYKVPLTVVKSDGGYTYDTSDLAALRQRVEDERG-DWIIYVTDAGQSG 342 Query: 363 YV-----------------KRLEAVAAAV------------SEKKAQINVLLCELVRLYR 393 + R++ V V S + ++ L+ E +R Sbjct: 343 HFDLVFGAAREAGIYDPKRTRVDHVGFGVVLGEDRKKFKTRSGETVRLVDLMDEGIRRSV 402 Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453 D + K +A LR + V +++ L F F K+ + K N Y Sbjct: 403 DKLKEKGRDQALSEDELRAASEAVAYGCIKYADLSHNRVGDYVFSFDKMLD-DKGNTAVY 461 Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENA 512 + YAY R RSI R A +D + + E + E +L + +P+V+ Sbjct: 462 LLYAYTRIRSIMRTA-----GMDRASLEQAIHNTEISLEHPKEWKLGKCITRFPQVLSRI 516 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572 + L +LY+LA+ + + R + K+ + RL L+ A A I+ + Sbjct: 517 LEDLLMHPLCEFLYELATTTTEFYDSCYCVEKDRQT-GDIVKVNVDRLLLLEATARIMET 575 Query: 573 GLNIIGVESPNEM 585 G +I+G+ + N+M Sbjct: 576 GFHILGINTVNKM 588 >gi|254446754|ref|ZP_05060229.1| arginyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235] gi|198256179|gb|EDY80488.1| arginyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235] Length = 584 Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 140/605 (23%), Positives = 251/605 (41%), Gaps = 108/605 (17%) Query: 36 RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS---VFIAGKGFINLY 92 RP D G L N A+ ++ +P IA+ +V +++ +P++ + IAG GFIN Sbjct: 33 RPADPRFGDLQANGALPYAKRNKNNPRQIAQSLVEKLEANPNLTEHADISIAGPGFINFK 92 Query: 93 LSPSYLRKILSSIV-VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 PS+ LS+ + + G KV +++ S N MHVGH R V+G+ + Sbjct: 93 FKPSFQLAWLSAFRDRESFKSAAKALHAGEKVVVDYGSPNTAKQMHVGHIRSIVIGEAIC 152 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ-----QALYNNDSDLPEGYYPGVYL 206 L+ F G EV R+ +I D G L F+ Y+ +AL + + E Y Sbjct: 153 RLLEFCGAEVVRDNHIGDWGTPYGKL----FYAYKRHLDAKALERDPLEELERLY----- 203 Query: 207 KHVGKELADKYS------SELLNF----PEEKWL-PIVKDYSVQAMMKIIRDDLKALNIQ 255 +G +LAD + EL++ PE L V S+Q + I ++ L++ Sbjct: 204 -KLGSKLADDAAVLEECRQELVDLQAGKPESMALWETVNKLSIQGLETIYKE----LDVH 258 Query: 256 HDIFISEDDFHRGDPSPI-RDIIDN-LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313 +D ++ E F+R + +++ DN L+ + + P + ++ + R Sbjct: 259 YDCYLGE-SFYRDKVEQVYQELKDNGLSEESKGAVVVFHPEHPRFKEQPFIIR------- 310 Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-HSGYVKRLEAVAA 372 KSDG+ Y DLA + E I ++ D + ++L+ Sbjct: 311 ------------KSDGASNYATTDLATMLYRNEHFKATSIVIVTDDRQKDHFEQLDLTTK 358 Query: 373 AVSEKK------------AQINVLLCELVRLYRDGMPIKMSK-------RAGDFI----- 408 EK +IN ++++ R G PI++ + RA + Sbjct: 359 KWFEKTRRQMPKFSHVMFGKINGEDGKVIK-SRSGDPIRLRQLIDEAVERAAKIVREKNA 417 Query: 409 -----TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARCR 462 ++H+ + +G +++++ L + + D+ F K S E N Y+ YA AR + Sbjct: 418 TLPEDEIKHIAEVIGVNAIKYADLSQNRTS--DYIFTWEKLLSFEGNTAPYLLYAAARIQ 475 Query: 463 SIFRQA-KDIFPDLDFDLFPRNVIPQESEFDT-SELQLIVHLAEYPRVIENATIAQEPYK 520 SIFR+ D DL+ P F+T E+ L + + V+++ P+ Sbjct: 476 SIFRKLDTDQLADLESKATP---------FETPEEIALANKIIAFVGVLQSTIEQLRPHL 526 Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 L YL++LA + +S + V + + RL L + SGL ++G+ Sbjct: 527 LCTYLFELAGAYSSFYSANK-------VIVSESDVQARRLLLCQRTLVALQSGLGLLGIP 579 Query: 581 SPNEM 585 + M Sbjct: 580 TLQRM 584 >gi|86742408|ref|YP_482808.1| arginine--tRNA ligase [Frankia sp. CcI3] gi|86569270|gb|ABD13079.1| Arginine--tRNA ligase [Frankia sp. CcI3] Length = 348 Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 51/137 (37%), Positives = 84/137 (61%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + +ERP+ HG ++ A+ L+R P +AE + R+ D ++ +V +AG GF+N Sbjct: 31 VTVERPKTPEHGDYASPVALQLARAARRPPRAVAETLARRLATDSELAAVDVAGPGFLNF 90 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+ + L +I ++V +G YGR + +G +VN+EFVSANPTGP+ + R A VGD L Sbjct: 91 RLADAALGEIARTVVSAGDRYGRAVRPRGVRVNLEFVSANPTGPVTLASARRAAVGDALG 150 Query: 152 SLMAFSGYEVTREYYIN 168 ++ +G+EV EY++ Sbjct: 151 RILPAAGFEVGTEYHVG 167 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 16/181 (8%) Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 L +VD VG+D+ R+ ++ LD D + Q+ +NPVFYVQYA+AR S+ R A Sbjct: 180 ALDDLVDAVGADAARYWLVRSSPDSALDLDLDLMARQTSDNPVFYVQYAHARISSLLRDA 239 Query: 469 KDIFPDLDFDLFPRNVI----PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 + L P +V P+E E L+ L E+PRVIE+A + P++LA Y Sbjct: 240 GSL--GLTAATEPVDVALLTQPREGE-------LLRALGEFPRVIESAARLRGPHRLARY 290 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 L +LA V++ + R P+ A T RL LV A + +GL ++GV +P Sbjct: 291 LEELAGVYYRFYDSCRVLPQ---GDAEPGPATGARLLLVAATRVVFANGLGLLGVSAPER 347 Query: 585 M 585 M Sbjct: 348 M 348 >gi|332523559|ref|ZP_08399811.1| arginine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176] gi|332314823|gb|EGJ27808.1| arginine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176] Length = 562 Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 141/588 (23%), Positives = 247/588 (42%), Gaps = 86/588 (14%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G ++ L++ L P IA + KID +A +IN + Sbjct: 26 LLETPKNSDMGDIAF-PTFSLAKVLRKAPQMIAAELAE--KIDSSQFEKVMAVGPYINFF 82 Query: 93 LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + + K +L +++ +YG+ IG G + ++ S N P VGH R V+ D + Sbjct: 83 LDKTTISKNVLHAVIEEKSDYGQQHIGDGQNITLDMSSPNIAKPFSVGHLRSTVIADAIG 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + + GY R ++ D G Q L ++ W Q A+ N D LK Sbjct: 143 HIYSKLGYNSIRINHLGDWGKQFGMLIVAYKLWGDQAAIEANPID--------ELLKLYV 194 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 + A+ + L+ +W ++D +A + + RD+ L N +D D+ Sbjct: 195 RINAEAEENPELDEQARQWFKKLEDGDKEAWDLWQWFRDESLVEFNRIYDKLDVTFDYFH 254 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-- 325 G+ + D +D + + E +SK Q D+++ L P L Sbjct: 255 GE-AFYNDKMDEGIQ---ILEDKHLLKESKGAQIVDLEKYDL------------PPALIK 298 Query: 326 KSDGSYTYFAADLAYFKCKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383 KSDG+ Y D+A + +R F+ IYV+G + S + K+L+AV + A N+ Sbjct: 299 KSDGATLYITRDMATAMYR-QRTFNFVKNIYVVGQEQSHHFKQLKAVLKEMGFDWAD-NM 356 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------VG 418 + + ++ K+S R G+ I L +DE VG Sbjct: 357 IHVSFGLVTKNKK--KLSTRKGNIIRLEPTLDEAVARALTQIESKNPDLENKEAVAHAVG 414 Query: 419 SDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 +V+F L DFD V + + P YVQY YAR +SI R+A + P+++ Sbjct: 415 VGAVKFYDLKTDRDNGYDFDLEAMVSFEGETGP--YVQYTYARIQSILRKA-NFTPEINK 471 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 D S D ++I L + I+ A +P +A + LA F+ +++ Sbjct: 472 DY---------SLNDDESWEIIKLLQSFATNIQRAADKYDPSIIAKFAIQLAQAFNKYYA 522 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H R +++ R RL L ++ A ++ L ++GV++P +M Sbjct: 523 HTR-----ILDESDERD---SRLALCYSTAVVLKESLRLLGVQAPEKM 562 >gi|256787088|ref|ZP_05525519.1| arginyl-tRNA synthetase [Streptomyces lividans TK24] gi|289770986|ref|ZP_06530364.1| arginyl-tRNA synthetase [Streptomyces lividans TK24] gi|289701185|gb|EFD68614.1| arginyl-tRNA synthetase [Streptomyces lividans TK24] Length = 586 Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 132/596 (22%), Positives = 233/596 (39%), Gaps = 111/596 (18%) Query: 48 NAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIV 106 N + L++ +P +A +VARI D ++ V ++G GF+N+ ++ + L++ + Sbjct: 44 NGILALAKKTKANPRELAAEVVARITTGDELIEDVEVSGPGFLNITVADRAITANLAARL 103 Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166 G G L +++ N MHVGH R AV+GD L S++ F+G + ++ Sbjct: 104 ADGERLGVPLKQDAGTTVVDYAQPNVAKEMHVGHLRSAVIGDALRSMLDFTGEKTIGRHH 163 Query: 167 INDAGAQINTLALSVF------------------------WRYQQALYNNDSDLPEGYYP 202 I D G Q L +F ++ +A+++ D + E Sbjct: 164 IGDWGTQFGMLIQYLFEHPGELAPAGDVDGEQAMSNLNRVYKASRAVFDTDEEFKERARR 223 Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262 V V + DK + +L W V + V + D++ I+ D + E Sbjct: 224 RV----VALQSGDKETLDL-------WQQFVDESKVYFYSVFEKLDME---IRDDEIVGE 269 Query: 263 DDFHRGDPSPIRDIIDNLARQGYVY--EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 ++ G P R L G EG L + F DD Sbjct: 270 SAYNDGMPETAR----LLEETGVAVRSEGALV----------------VFFDEIRGKDDQ 309 Query: 321 DRPLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 PL+ K+DG + Y A+DL + + + ++YV+ S + + + A Sbjct: 310 PVPLIVQKADGGFGYAASDLTAIRNRVQDLHATTLLYVVDVRQSLHFRMVFETARRAGWL 369 Query: 378 KAQINVL-LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416 ++ + L DG P K RAG+ + L ++DE Sbjct: 370 GDEVTAHNMGYGTVLGADGKPFKT--RAGETVRLEDLLDEAVQRAAEVVREKARDLTEDE 427 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 VG +V++ L + FD ++ + + V Y+QYAYAR +SI R+A Sbjct: 428 IQERAAQVGIGAVKYADLSTSPNRDYKFDLDQMVSLNGDTSV-YLQYAYARIQSILRKAG 486 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 ++ P E +E L +HL + + A P+KLA YLY LA Sbjct: 487 EVRP----------AAHPELALHEAERALGLHLDAFGTTVFEAAAEYAPHKLAAYLYQLA 536 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 S++ + + ++A + RL L A ++ G+ ++G+ +P + Sbjct: 537 SLYTTFYD------KCPVLKAETPEQVENRLFLCDLTARTLHRGMALLGIRTPERL 586 >gi|221091655|ref|XP_002169247.1| PREDICTED: similar to arginyl-tRNA synthetase, partial [Hydra magnipapillata] Length = 762 Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 143/608 (23%), Positives = 247/608 (40%), Gaps = 117/608 (19%) Query: 43 GHLSTNAAMILSRPL------GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS 96 G N+AM +++ L P+ IAE I+ + +P V V IAG GFIN+ L Sbjct: 207 GDYQCNSAMAIAKLAEKKHGKKLSPVVIAEKILENLPSNPVVKEVSIAGPGFINITLEKR 266 Query: 97 YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 ++ IL+ ++ + +GK KV I+F S N MHVGH R +++G++LA L+ F Sbjct: 267 FVCDILNKVLHEKVHPPG--VGKKKKVIIDFSSPNIAKEMHVGHLRSSIIGESLARLLEF 324 Query: 157 SGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLP 197 ++V R ++ D G Q L L F++ + ++ D + Sbjct: 325 LNHDVLRLNHVGDWGTQFGMLIAHLEDKFPNFKEVSPPIEDLQSFYKASKKRFDEDGEFK 384 Query: 198 EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257 + Y V G P VK+ + + + + R + + + + D Sbjct: 385 KRAYQRVVDLQGGN-------------------PDVKN-AWKLICDVSRKEFQRIYDRLD 424 Query: 258 I-FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 I I + + D P I+++L + ++ + +K D D + + + M Sbjct: 425 ITLIERGESYYNDLMP--KIVEDLKKGSFLLD---------ICEKAD-DGRWIAWAPNM- 471 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYF--KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374 + L+KSDG +TY +DLA + K E G + +IYV+ + + K++ +A Sbjct: 472 --KIPLILVKSDGGFTYDTSDLAALHQRLKDEHG-EWVIYVVDAGQGDHFKQVFGLAQKA 528 Query: 375 SEKKAQINVL--LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 I + + V L D K R+GD + L ++DE S+ ++ ++ Sbjct: 529 GWYNPSITRVDHVAFGVVLGEDKK--KFKTRSGDTVRLSELLDEGLKRSMDKLLEKERDK 586 Query: 433 E---------------------------LLDFDFCKVKE-QSKENPVFYVQYAYARCRSI 464 E L+D+ F K K N Y+ YAY R RSI Sbjct: 587 ELSPDELKAAQSSTAYGCIKYADLCHNRLMDYVFSFDKMLDDKGNTAVYLLYAYTRIRSI 646 Query: 465 FRQAKDIFPDLDFDLFPRNV-IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 R+AK L+ + ++ + E E+ +L L +P VI + L Sbjct: 647 QRKAKVDEQVLNLYISQNSINLSHEKEWKLGKL-----LCRFPEVITRCANDLMLHPLCE 701 Query: 524 YLYDLASVFHGHWSH------GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 YLY+LAS + RE + V N R+ ++ VA +G I+ Sbjct: 702 YLYELASTLTEFYDACYCIEINRETGEILSVDLN-------RIAILETVAKFFETGFYIL 754 Query: 578 GVESPNEM 585 G++ +M Sbjct: 755 GLKPVTKM 762 >gi|89073534|ref|ZP_01160057.1| arginyl-tRNA synthetase [Photobacterium sp. SKA34] gi|89050798|gb|EAR56279.1| arginyl-tRNA synthetase [Photobacterium sp. SKA34] Length = 576 Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 133/590 (22%), Positives = 246/590 (41%), Gaps = 97/590 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-- 100 G N M +++ LG +P A+ ++ +++D + V IAG GFIN++L+ ++L + Sbjct: 37 GDYQANGVMGVAKKLGTNPREFAQKVIDCLELDGIAEKVEIAGPGFINIFLNKAWLAERG 96 Query: 101 ---ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + E +N++ +++ + N MHVGH R ++GD + + F Sbjct: 97 EEALKDERLAVNTETAQNIV-------VDYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFL 149 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQA--LYNNDSDLPEGYYPGVYLKHVGKELAD 215 G+ V R ++ D G Q L ++ + Q+ + N SDL EG+Y + + E Sbjct: 150 GHNVIRANHLGDWGTQFGMLIANMQRKEQEGTDVSMNISDL-EGFYRESKVLYDEDE--- 205 Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD-IFISEDDFHRGDPSPIR 274 ++ NF L +Y ++ +++ LK +D + +S D + S Sbjct: 206 EFGKTARNFVVR--LQSGDEYCLEKWKQLVAITLKQNQRNYDRLSVSLTDDNVMGESMYN 263 Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR---STMVGDDVDRPLLKSDGSY 331 D++ G++ K K + D +++ G+ + + K DG Y Sbjct: 264 DMLS----------GVVADLKEKGL-AVESDGATVVYLDEYKNKDGEPMGVIIQKRDGGY 312 Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQINV 383 Y D+A K +YE+ D ++Y + S + V++ V +VS + + Sbjct: 313 LYTTTDIACAKYRYEQLHADRVLYFIDSRQHQHLMMAWAIVRKAGYVPESVSLEHHAFGM 372 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL--------- 434 +L +DG P K RAG + L ++DE + + ++ KN EL Sbjct: 373 MLG------KDGRPFKT--RAGGTVRLADLLDEAVERANK--LIEEKNPELSAEEKANIA 422 Query: 435 --LDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRSIFRQAKDIFPDL 475 + K + SK N Y+QYAY R SIF++A DL Sbjct: 423 QTVAMAAVKYSDLSKHRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVASIFKRANVELSDL 482 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + VI D E L+ L ++ +++ +P+ + YL++LA +F Sbjct: 483 THPI----VIT-----DEKEQALLSKLLQFEEAVQSVAREGQPHLMCTYLFELAGMFSSF 533 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P L + + RL+L + I GL+++G+E+ M Sbjct: 534 Y---EACPILNAEEG----VKQSRLKLALLTSKTIKQGLDLLGIETLERM 576 >gi|324992656|gb|EGC24577.1| arginine--tRNA ligase [Streptococcus sanguinis SK405] gi|324995815|gb|EGC27726.1| arginine--tRNA ligase [Streptococcus sanguinis SK678] gi|325697259|gb|EGD39145.1| arginine--tRNA ligase [Streptococcus sanguinis SK160] gi|327460059|gb|EGF06398.1| arginine--tRNA ligase [Streptococcus sanguinis SK1] gi|327472205|gb|EGF17642.1| arginine--tRNA ligase [Streptococcus sanguinis SK408] gi|327488649|gb|EGF20449.1| arginine--tRNA ligase [Streptococcus sanguinis SK1058] gi|332360168|gb|EGJ37982.1| arginine--tRNA ligase [Streptococcus sanguinis SK1056] Length = 562 Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 142/600 (23%), Positives = 246/600 (41%), Gaps = 110/600 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E+P+ G ++ A L++ P IA I +I D V G ++N + Sbjct: 26 LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIAADIAEKIDT-AHFDKVVATGP-YVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 LS + + +++ ++ G +YG+ G + I+ S N P VGH R V+GD L+ Sbjct: 83 LSKAEISGQVIKEVIKDGADYGQQNEGNNQNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY + ++ D G Q L ++ W Q+A+ N P +Y++ + Sbjct: 143 NIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKWGSQEAVEAN----PIDELLKLYVR-IN 197 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 E+ + S L+ W ++D +A + + RD+ L N +++ E D Sbjct: 198 AEIENDPS---LDEEGRLWFKKLEDGDPEATELWQWFRDESLTEFNRIYELLGVEFDSLN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323 G+ + + I L +G + E SK D+ +D + P Sbjct: 255 GEAFYNDKMDEGIQILEDKGLLQE-------SKGASIVDL-------------EDFNLPP 294 Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374 + KSDG+ Y D+A Y Y F +YV+G + + + ++L+AV + Sbjct: 295 AMIKKSDGATLYITRDIATAIYRARTY--NFVKNVYVVGQEQANHFRQLKAVLKKMGFDW 352 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 S+ ++ L R K+S R G+ I L + E Sbjct: 353 SDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLLEAISRAKSQIEAKNPELEN 405 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG +V+F L DFD V + + P Y+QYAYAR +SI R+A Sbjct: 406 KDAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQSILRKA 463 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 F + S D ++I L ++ RV++ A EP +A Y L Sbjct: 464 N----------FQPDAEATYSLNDPESWEIIKLLQDFGRVVKRAADNYEPSLIAKYAISL 513 Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A F+ +++H R E+P RL L ++ A ++ L ++GVE+P +M Sbjct: 514 AQAFNKYYAHTRILDESPERD-----------SRLALSYSTAVVLKEALRLLGVEAPEKM 562 >gi|238924596|ref|YP_002938112.1| arginyl-tRNA synthetase [Eubacterium rectale ATCC 33656] gi|259511645|sp|C4ZD15|SYR_EUBR3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|238876271|gb|ACR75978.1| arginyl-tRNA synthetase [Eubacterium rectale ATCC 33656] Length = 597 Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 133/609 (21%), Positives = 250/609 (41%), Gaps = 103/609 (16%) Query: 36 RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95 RP C N AM ++ P I++ + A ++ D +SV GF+N+ + Sbjct: 33 RPDLC---EFQCNGAMAAAKEYKCAPFMISDKVAALLESDEMFESVESVKPGFLNIKMDT 89 Query: 96 SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155 ++L K ++ + YG K + +++ N P+HVGH R AV+G+++ + Sbjct: 90 AFLAKYMNDMKDDEGRYGLEKAKKPLTIVVDYGGPNVAKPLHVGHLRSAVIGESVKRIAK 149 Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP-----------GV 204 F G+ V + ++ D G Q+ + + R +Y ++S G YP + Sbjct: 150 FMGHNVIGDVHLGDWGLQMGLIITELRERKPDLVYFDES--YTGEYPKEAPFTISELEDI 207 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYS--VQAMMKIIRDDLK----ALNIQHDI 258 Y GK +D+ E ++ + Y + +M + DLK LN+ ++ Sbjct: 208 YPTASGKSKSDESFKEAALLATKELQGGRRGYQALLSHIMNVSVTDLKRNYENLNVHFEL 267 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVY--EGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 + E D P +++ + +G+ + EG L K D D K++ Sbjct: 268 WKGESDAQPYVPG----MVEMMKEKGFAHMSEGALV-----VDVKEDTDTKEI------- 311 Query: 317 GDDVDRP---LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAA 372 P +LKSDG+ Y DLA + E D +IY+ + S + ++ A Sbjct: 312 ------PPCIILKSDGASLYSTTDLATLVMRMKENNPDRVIYLADARQSMHFIQVFRCA- 364 Query: 373 AVSEKKAQINVLLCELVRL------YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 +K I ELV + +DG P K R G + L +++ E+ + + + Sbjct: 365 ----RKTGIVPDTTELVHIGFGTMNGKDGKPFKT--RDGGVMRLEYLLKEIDDEMLNKIK 418 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVI 485 +K E L+ D + ++ +K + V+Y ++ +KD D+D F F N Sbjct: 419 ENQKEKENLNIDEAEAEQTAKTVALAAVKYGDLSNQA----SKDYIFDIDRFTSFEGNTG 474 Query: 486 P----------------QESEFDTSELQ-------------LIVHLAEYPRVIENATIAQ 516 P + D S L+ L++ LA++ IE+A Sbjct: 475 PYILYTIVRIKSILSKYEAKGGDISALKDAIMPAVNAGQKNLMLSLAKFNATIESAYEES 534 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 P+K+ Y+Y+LA+ F+G + + + N +L + L+ I+ + +++ Sbjct: 535 APHKICAYIYELANAFNGFYHD------TKILSEENEELKKSYISLLVLTKEILEACIDM 588 Query: 577 IGVESPNEM 585 +G +P+ M Sbjct: 589 LGFSAPDRM 597 >gi|332363700|gb|EGJ41480.1| arginine--tRNA ligase [Streptococcus sanguinis SK49] Length = 562 Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 142/600 (23%), Positives = 246/600 (41%), Gaps = 110/600 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E+P+ G ++ A L++ P IA I +I D V G ++N + Sbjct: 26 LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIATDIAEKIDT-AHFDKVVATGP-YVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 LS + + +++ ++ G +YG+ G + I+ S N P VGH R V+GD L+ Sbjct: 83 LSKAEISGQVIKEVIKDGADYGQQNEGNNQNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY + ++ D G Q L ++ W Q+A+ N P +Y++ + Sbjct: 143 NIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKWGSQEAVEVN----PIDELLKLYVR-IN 197 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 E+ + S L+ W ++D +A + + RD+ L N +++ E D Sbjct: 198 AEIENDPS---LDEEGRLWFKKLEDGDPEATELWQWFRDESLTEFNRIYELLGVEFDSLN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323 G+ + + I L +G + E SK D++ D + P Sbjct: 255 GEAFYNDKMDEGIQILEEKGLLQE-------SKGASIVDLE-------------DFNLPP 294 Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374 + KSDG+ Y D+A Y Y F +YV+G + + + ++L+AV + Sbjct: 295 AMIKKSDGATLYITRDIATAIYRARTY--NFVKNVYVVGQEQANHFRQLKAVLKKMGFDW 352 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 S+ ++ L R K+S R G+ I L + E Sbjct: 353 SDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLLEAISRAKSQIEAKNPELEN 405 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG +V+F L DFD V + + P Y+QYAYAR +SI R+A Sbjct: 406 KEAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQSILRKA 463 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 F + S D ++I L ++ RV++ A EP +A Y L Sbjct: 464 N----------FQPDAEATYSLNDPESWEIIKLLQDFGRVVKRAADNYEPSLIAKYAISL 513 Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A F+ +++H R E+P RL L ++ A ++ L ++GVE+P +M Sbjct: 514 AQAFNKYYAHTRILDESPERD-----------SRLALSYSTAVVLKEALRLLGVEAPEKM 562 >gi|324989672|gb|EGC21616.1| arginine--tRNA ligase [Streptococcus sanguinis SK353] Length = 562 Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 142/600 (23%), Positives = 246/600 (41%), Gaps = 110/600 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E+P+ G ++ A L++ P IA I +I D V G ++N + Sbjct: 26 LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIAADIAEKIDT-AHFDKVVATGP-YVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 LS + + +++ ++ G +YG+ G + I+ S N P VGH R V+GD L+ Sbjct: 83 LSKAEISGQVIKEVIKDGADYGQQNEGNNQNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY + ++ D G Q L ++ W Q+A+ N P +Y++ + Sbjct: 143 NIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKWGSQEAVEAN----PIDELLKLYVR-IN 197 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 E+ + S L+ W ++D +A + + RD+ L N +++ E D Sbjct: 198 AEIENDPS---LDEEGRLWFKKLEDGDPEATELWQWFRDESLTEFNRIYELLGVEFDSLN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323 G+ + + I L +G + E SK D+ +D + P Sbjct: 255 GEAFYNDKMDEGIQILEEKGLLQE-------SKGASIVDL-------------EDFNLPP 294 Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374 + KSDG+ Y D+A Y Y F +YV+G + + + ++L+AV + Sbjct: 295 AMIKKSDGATLYITRDIATAIYRARTY--NFVKNVYVVGQEQANHFRQLKAVLKKMGFDW 352 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 S+ ++ L R K+S R G+ I L + E Sbjct: 353 SDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLLEAISRAKGQIEAKNPDLEN 405 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG +V+F L DFD V + + P Y+QYAYAR +SI R+A Sbjct: 406 KDAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQSILRKA 463 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 F + S D ++I L ++ RV++ A EP +A Y L Sbjct: 464 N----------FQPDAEATYSLNDPESWEIIKLLQDFGRVVKRAADNYEPSLIAKYAISL 513 Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A F+ +++H R E+P RL L ++ A ++ L ++GVE+P +M Sbjct: 514 AQAFNKYYAHMRILDESPERD-----------SRLALSYSTAVVLKEALRLLGVEAPEKM 562 >gi|167766874|ref|ZP_02438927.1| hypothetical protein CLOSS21_01391 [Clostridium sp. SS2/1] gi|317499285|ref|ZP_07957558.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA] gi|167711422|gb|EDS22001.1| hypothetical protein CLOSS21_01391 [Clostridium sp. SS2/1] gi|291558413|emb|CBL37213.1| arginyl-tRNA synthetase [butyrate-producing bacterium SSC/2] gi|316893454|gb|EFV15663.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA] Length = 561 Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 134/564 (23%), Positives = 241/564 (42%), Gaps = 92/564 (16%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGK 119 P IA I +I DV V G ++N +L+ +Y++++L+ V+G YG IGK Sbjct: 51 PNMIATEIAEKIPASEDVSKVEAMGP-YVNFFLNKENYVKEVLAK--VNGT-YGAQEIGK 106 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G V I++ S N HVGH R ++G++L + GY+V R ++ D G Q L + Sbjct: 107 GKTVCIDYSSPNIAKNFHVGHLRTTIIGNSLYHIFDKLGYKVERINHLGDWGTQFGKLIV 166 Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 + W ++A+ + +PE +Y+K E A+K + LN +W ++ Sbjct: 167 AYKKWGSKEAV--EEKGIPE--LLRIYVKF--HEEAEK--DDTLNDQAREWFAKMEQGDE 218 Query: 239 QAM----------MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288 +A+ M + K LN+ D + E F+R + +++ L + + E Sbjct: 219 EALSIWEWFKDISMVEYKRIYKMLNMDFDHYTGE-SFYRDKTAA---VVEELKEKNLLKE 274 Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL-AYFKCKYER 347 S+ D+D D ++K DGS Y DL A F K E Sbjct: 275 -------SEGAMIVDLDEY----------DMAPCLVMKKDGSSIYATRDLAAIFYRKKEY 317 Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407 FD IYV G + + ++ V + + A+ N++ + +G K+S R+G+ Sbjct: 318 NFDKCIYVTGLEQKLHFAQVFKVVELMGYEWAKENLIHVPYGLVSLEGG--KLSTRSGNI 375 Query: 408 I-----------TLRHVVDE--------------VGSDSVRFMMLWRKNSELLDFDFCKV 442 + +R ++ E VG ++ F L+ + + + F + K+ Sbjct: 376 VYAEDILKESVSKIREIIAEKNPDLKDKEDVAQKVGIGAIIFNDLYNQRIKDVTFTWEKI 435 Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTSELQLIVH 501 E YVQY YAR S+ R+ ++D L D + + L+ Sbjct: 436 HSFDGETGP-YVQYTYARAASVLRKTGITEVGEIDPSLVT----------DETSVALLKE 484 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 + +P VI+ A EP ++ Y+ +A F+ + + N ++KL R++ Sbjct: 485 IERFPEVIKVAADRLEPSVISRYVMGVAQSFNRFYHENQCN-------VEDQKLKEARVK 537 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 +V +I GL+++G++ P +M Sbjct: 538 IVILAKQVIKDGLDLLGIQCPEQM 561 >gi|66501636|ref|XP_623301.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic [Apis mellifera] Length = 674 Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 144/612 (23%), Positives = 260/612 (42%), Gaps = 120/612 (19%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLD-----PLTIAELIVARIKIDPDVDSVFIAGK 86 ++I + G N+AM L + L D P +A I+++I+ V + +AG Sbjct: 115 VIISISTNPKFGDYQCNSAMPLCKQLNNDGIQTKPRDVANNIMSKIEESSLVSKLEVAGA 174 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GFIN+YL +++ ILS++V +G + K +V ++F S N MHVGH R ++ Sbjct: 175 GFINIYLKKEFIQIILSTLVKNGKVFPP--YTKKQRVIVDFSSPNIAKEMHVGHLRSTII 232 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQ 187 GD++A L+ F G++V R ++ D G Q L L F++ + Sbjct: 233 GDSIARLLEFLGHDVLRINHVGDWGTQFGMLIAHLQNRFPDYLTISPPIIDLQSFYKESK 292 Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247 A ++ D + + Y V +L F E I K + Q + + R Sbjct: 293 ARFDKDEEFKKHAYNCVV--------------KLQTFDPE----ITKAW--QLICDVSRK 332 Query: 248 DLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 + + + ++ DI + E RG+ + I+ +L +G + + D Sbjct: 333 EFEKIYVRLDINLIE----RGESFYQKHMEVIVKDLETKGLLED--------------DE 374 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGY 363 RK + + +++ ++KSDG +TY +D+A K + E D +IYV + + + Sbjct: 375 GRKIMWGKR---NNEIPLTIVKSDGGFTYDTSDMAALKQRIEEERADWIIYVTDAGQAKH 431 Query: 364 VKRLEAVA--AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----- 416 + L++ A A + + +I+ + +V L +D K R+GD + L ++DE Sbjct: 432 FQILKSCAERAGIIKSYHRIDHVGFGVV-LGKDKKKFKT--RSGDTVKLSDLLDEGLKRA 488 Query: 417 -------------------VGSDSVRFMML------WRKNSELLDFDFCKVKEQSKENPV 451 + +S+ + + +N E + F F K+ E K N Sbjct: 489 LDKLKEKERDKVLTEEELKIAQESIAYGCIKYADLSHNRNHEYV-FSFDKMLE-DKGNTA 546 Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511 Y+ YA R RSI R A +I + +L N I E E E +L L ++ V+ Sbjct: 547 VYLLYALTRIRSIARAA-NITQNKLQELAQSNQISLEHE---KEWKLAKVLIKFADVLIK 602 Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHG---RENPRLRFVQANNRKLTMMRLQLVHAVAS 568 T ++L Y Y+++ F + + +N V N + R+ L A A Sbjct: 603 ITKDLYLHQLCEYCYEISCTFSEFYDNCYCVEKNELGEIVNIN-----IGRMLLTEATAI 657 Query: 569 IINSGLNIIGVE 580 I+ +I+G++ Sbjct: 658 IMEKCFSILGLK 669 >gi|15674020|ref|NP_268195.1| arginyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403] gi|281492641|ref|YP_003354621.1| arginyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147] gi|23822205|sp|Q9CE12|SYR_LACLA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|12725087|gb|AAK06136.1|AE006433_6 arginyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403] gi|281376305|gb|ADA65796.1| Arginyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147] Length = 564 Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 141/592 (23%), Positives = 249/592 (42%), Gaps = 93/592 (15%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IE+P+ G L+ A L++ L P IA I KID IA ++N + Sbjct: 27 IIEKPKSSDLGDLAF-PAFQLAKTLRKSPQIIAGEIAE--KIDTKGFEKVIAVGPYVNFF 83 Query: 93 LSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + +++ ++ G YG IG+G V I+ + N P +GH R V+GD++A Sbjct: 84 LDKNATASEVIREVLTEGEHYGDANIGQGGNVPIDMSAPNIAKPFSIGHLRSTVIGDSIA 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGVYLKHV 209 + GY+ + ++ D G Q L ++ + +Y + + N D Y + + Sbjct: 144 KIYEKLGYQPIKINHLGDWGKQFGLL-ITAYKKYGDEATITANPIDELLKLYVKINAEAK 202 Query: 210 GKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 D+ + + +E+ L I K +S ++++ R K L + D F+ E + Sbjct: 203 EDPEVDEEGRQWFLKMEQGDEEALRIWKWFSDVSLIEFNRIYGK-LGVSFDHFMGESFY- 260 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL- 325 + I+++L + ++E SK D+++ L P L Sbjct: 261 ---SDKMDAIVEDLESKNLLHE-------SKGALIVDLEKYNL------------NPALI 298 Query: 326 -KSDGSYTYFAADL---AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--AAAVSEKKA 379 K+DG+ Y DL AY K + F +YV+G + + + K+L+AV A Sbjct: 299 KKTDGATLYITRDLATAAYRKKTF--NFVKSLYVVGGEQTNHFKQLKAVLKEAGYDWSDD 356 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 ++V + + + K S R G + L +DE Sbjct: 357 MVHVPFGMVTQGGK-----KFSTRKGHVVKLEMALDEAVDRAEKQIEAKNPNLENKEEVA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +V+F L + DFD + V + + P YVQYA+AR +SI R+A Sbjct: 412 KQVGVGAVKFYDLKTDRNNGYDFDLDEMVSFEGETGP--YVQYAHARIQSILRKAN---R 466 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 +D + V D +++ L E+P V++ A EP +A Y LA F+ Sbjct: 467 KVDINNISLAV------SDAEAWEIVKALKEFPNVVKRAADNYEPSVIAKYAISLAQAFN 520 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R + ++ +L RL L+ A + ++ L ++GV +P M Sbjct: 521 KYYAHVR-------ILEDDAQLD-GRLALISATSIVLKEALRLLGVAAPENM 564 >gi|224068192|ref|XP_002189938.1| PREDICTED: arginyl-tRNA synthetase [Taeniopygia guttata] Length = 625 Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 131/533 (24%), Positives = 232/533 (43%), Gaps = 77/533 (14%) Query: 43 GHLSTNAAMILSRPL------GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS 96 G N+AM +S+ L + P IAE IV I + ++ V IAG GFIN++L Sbjct: 107 GDYQCNSAMGISQVLLKTREQKVSPREIAEKIVKSIPANECIEKVEIAGPGFINVHLRKD 166 Query: 97 YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 ++ K LSS++++G++ IGK KV ++F S N MHVGH R ++G+++ L F Sbjct: 167 FVSKQLSSLLINGVQ--PPAIGKRKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEF 224 Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELA 214 GY+V R ++ D G Q L + ++ L + DL + +Y + +E Sbjct: 225 VGYDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLSVSPPIGDL-QAFYKESKQRFDTEEEF 283 Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---S 271 K + + + + K +K +++ + + R + + + DI + E RG+ Sbjct: 284 KKRAYQCVVLLQSKNPDFIKAWNL--ICDVSRREFQKIYNCLDITLIE----RGESFYHE 337 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 ++DI+ +G+V + D RK + + G V ++KSDG + Sbjct: 338 MMKDIVKEFEDKGFV--------------QVDDGRKVVF----VPGFPVPLTIMKSDGGF 379 Query: 332 TYFAADLAYFKCKY--ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE--------KKAQI 381 TY +DLA K + E+G D +IYV+ S S +++ + A + A Sbjct: 380 TYDTSDLAALKHRLCEEKG-DILIYVVDSGQSVHLQTVFAAGQMIGWYDPKVTRVAHAAF 438 Query: 382 NVLLCE--------------LVRLYRDGMPIKMSK---RAGDFI----TLRHVVDEVGSD 420 V+L E L+ L +G+ M K + D + L+ V Sbjct: 439 GVVLGEDKKKFKTRSGDTVRLIDLLEEGLKRAMDKLKDKERDKVLTPEELKAAQTSVAFG 498 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +++ L F F K+ + + N Y+ YA+ R R+I R A ++D + Sbjct: 499 CIKYADLSHNRLNDYVFSFDKMLD-DRGNTAAYLLYAFTRIRAIARLA-----NIDEQML 552 Query: 481 PRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 + + D E +L + +P +++ + L YLY+LA+ F Sbjct: 553 QKAAREEVLVLDHEKEWKLGKCILRFPEILQKILEDLLLHTLCDYLYELATTF 605 >gi|282882268|ref|ZP_06290902.1| arginine--tRNA ligase [Peptoniphilus lacrimalis 315-B] gi|281297889|gb|EFA90351.1| arginine--tRNA ligase [Peptoniphilus lacrimalis 315-B] Length = 569 Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 137/601 (22%), Positives = 252/601 (41%), Gaps = 106/601 (17%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG----KGF 88 ++E P D G + L++ P IAE + +I +S + A + Sbjct: 27 MVEIPPDYKMGDFAF-PVFSLAKIYRKTPAIIAEELAKKI------ESKYFAKIENKNAY 79 Query: 89 INLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 +N ++ L ++L + +G++ IG+G V +E+ S N P H+GH R V+G Sbjct: 80 LNFFIDKDILAEEVLKETIDKKENFGKSTIGRGKNVCVEYSSTNIAKPFHIGHIRSTVIG 139 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSD-LPEGYYPGVY 205 D++ + F GY ++ D G Q L + W ++ + N D L + Y Sbjct: 140 DSIKRIYQFLGYNTIAINHLGDYGTQFGMLIYAYKKWGDKKKIEENPIDELLKLYVKVNT 199 Query: 206 LKHVGKELADK---YSSELLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257 L KE+ ++ + EL N E KW K+ S++ ++ K L+I+ D Sbjct: 200 LAEEDKEVKEECRYWFKELENQNPEAVEIWKWF---KEVSLKEFNRV----YKMLDIEFD 252 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 + E + P+ I D+ R + E +S+ + ++ Sbjct: 253 SYNGESFYSDKMPALIEDL-----RNRNILE------ESQGAEVINL------------- 288 Query: 318 DDVDRP---LLKSDGSYTYFAADLAYFKCKYE--RGFDNMIYVMGSDHSGYVKRLEAVA- 371 D+ D P ++KSDG+ Y DLA K ++E + F + IYV+GS S + K+L+A Sbjct: 289 DEYDLPPAIVVKSDGTTIYLTRDLAAAKYRHENYKPFRS-IYVVGSQQSLHFKQLKATLK 347 Query: 372 ----------------------AAVSEKKAQINVL---LCELVRLYRDGMPIKMSKRAGD 406 +S +K ++ L L + R+ + + K + Sbjct: 348 KAGFDWYDEIIHVAFGMVSLEDGTLSTRKGKVVYLEDVLNRAIEKVREILDQREEKTSRK 407 Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF-YVQYAYARCRSIF 465 + + VG +++F L+ N + D+ F K S E YVQY YAR S+ Sbjct: 408 IENKEELAEIVGIGAIKFQELF--NQRIKDYVFNWDKTLSFEGESGPYVQYVYARISSLL 465 Query: 466 RQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 + + + DF L E+ ++ +L + V+ +A EPY + Y Sbjct: 466 EKGEFSLDKKFDFSLLQ----------GQEEVDILRNLYNFTDVVIDAHNKFEPYIITRY 515 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 + +LA F+ ++ R + ++ RL L ++V ++I GL+++G+++P + Sbjct: 516 IVELAKNFNKFYTQ-------RPILVDDELTKNTRLLLCYSVKNVIRQGLDLLGIKAPEK 568 Query: 585 M 585 M Sbjct: 569 M 569 >gi|255066448|ref|ZP_05318303.1| arginine--tRNA ligase [Neisseria sicca ATCC 29256] gi|255049328|gb|EET44792.1| arginine--tRNA ligase [Neisseria sicca ATCC 29256] Length = 572 Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 124/586 (21%), Positives = 245/586 (41%), Gaps = 80/586 (13%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEALAGNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P +L + + + ++ +G K V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRPEFLAQNIHA-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ F G V R+ ++ D G Q L + + + +DL + Y Sbjct: 144 RVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203 Query: 212 ELADKYSSEL--LNFPEEKWLPIVKDYSVQAM--MKIIRDDLKALNIQHDIFISEDDFHR 267 AD + L +E L + K + ++ + + D L L ++ + E ++ Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDSL-GLKLRPEDVAGESKYN- 261 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPL 324 ++ ++D+L ++G E D +++F G+ + Sbjct: 262 ---DDLQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFIV 303 Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQI 381 K G + Y + DLA + + R D ++YV+ + + ++L + A + A+ Sbjct: 304 QKQGGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPENAKA 363 Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------- 416 + + + +DG P K R+GD + L ++ E Sbjct: 364 EFIGFGTM-MGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGAGEAAKIG 420 Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 VG +V++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 421 KTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG----- 474 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 ++D+ V+ + E QL L ++ V+++ P+ LA YLY A++F Sbjct: 475 -EWDMAAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQTATLFSR 528 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + P L+ A RLQL + GL+++G++ Sbjct: 529 FY---EACPILKAEGATRNS----RLQLAKLTGDTLKQGLDLLGID 567 >gi|150389500|ref|YP_001319549.1| arginyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF] gi|226701371|sp|A6TNX2|SYR_ALKMQ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|149949362|gb|ABR47890.1| arginyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF] Length = 566 Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 130/569 (22%), Positives = 244/569 (42%), Gaps = 84/569 (14%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIE 111 L++ P IAE +VA+I++ D + V G G++N +++ +Y + ++ ++ G + Sbjct: 46 LAKTFRKAPQVIAEELVAKIQLTDDFEKVDNTG-GYLNFFVNRNTYAKAVIQEVLSKGDQ 104 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG +G+G + I++ + N P HVGH R V+G++L + F GY ++ D G Sbjct: 105 YGSRNLGEGKNICIDYSAPNVAKPFHVGHLRSTVIGNSLYRIYDFLGYNCIGINHLGDWG 164 Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE-KWL 230 Q + ++ Y N D E + KE + + + F +E + Sbjct: 165 TQFGKVIVA---------YKNWGDKAE----------IEKEPINTLLALYVKFHDEAEKN 205 Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI-IDNLARQGYVYEG 289 P ++D + K+ + D +AL++ F SE + D+ D+ + + + Sbjct: 206 PDLEDEARGWFTKMEKGDEEALSLWK-WFSSETIKELKKIYALLDVHFDHYSGESFY--- 261 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR------PLL--KSDGSYTYFAADLA-- 339 K D KQ L + + + VD P L K DGS Y D+A Sbjct: 262 -----NDKMDVVIDELNKQNLLKESQGANIVDLEEYNMPPCLVQKKDGSTLYATRDIAAA 316 Query: 340 --------YFKCKYERGFDN---------MIYVMGSDHSGYVK-----RLEAVAAAVSEK 377 + KC Y + +I +MG D + ++ R+ + + Sbjct: 317 IYRKNTFNFEKCLYVTDYSQNLHFAQWFKVIELMGYDWAKDIEHISFGRVTHEGRRIQSR 376 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437 K + VLL E++ + + + ++ + V +VG ++ F L N+ + D Sbjct: 377 KGSV-VLLEEVLNGAVERISEIIEEKNPNVENKEQVAKDVGIGAIVFNDL--SNNRIKDI 433 Query: 438 DFCKVKEQSKENPVF-YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 F S E YVQY +AR S+ R+A+ D I D + Sbjct: 434 SFSWDTAFSFEGETGPYVQYTHARASSVLRKAEVAITDH---------INAAHLTDDVTM 484 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +I + ++P+VI +A EP + ++ ++A F+ + ++P L + +L Sbjct: 485 NVIKTIEQFPQVIVDAQRKNEPSIITRHIVNIAQAFNRFY---HDHPIL----VEDEELK 537 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 M RL +V AV +++ GL++IG+++P +M Sbjct: 538 MARLAVVQAVKQVLSVGLSLIGIKAPEKM 566 >gi|223997646|ref|XP_002288496.1| arginyl-trna synthetase [Thalassiosira pseudonana CCMP1335] gi|220975604|gb|EED93932.1| arginyl-trna synthetase [Thalassiosira pseudonana CCMP1335] Length = 602 Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 146/606 (24%), Positives = 242/606 (39%), Gaps = 112/606 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98 G NAAM L++ GL+P A IV +K D++ IAG GFINL YL Sbjct: 36 GDYQCNAAMSLAKSAGLNPRECASKIVDGLKAIEGFDTIMEEPEIAGPGFINLRFKDGYL 95 Query: 99 RKILSSIVVSGIEYGRNLI---GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155 + + + GR I K+ ++F S N MHVGH R ++GDTL++L+ Sbjct: 96 AGAAGKMAMDAEDGGRLAIPVTKNKQKIIVDFSSPNIAKEMHVGHLRSTIIGDTLSNLLT 155 Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215 FSG++V R ++ D G Q L + + +AL S K+V +L D Sbjct: 156 FSGHDVLRLNHVGDWGTQFGMLVEHLRDEFPEALDKESS------------KNV--DLGD 201 Query: 216 KYSSELLNFPEEKWLPIVKDYSVQA---MMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 +L +K + +++ V+A ++K+ D +AL + + R + Sbjct: 202 LV---MLYKAAKKRFDVDEEFKVRAREGVVKLQAGDEEALAAWESLCAA----SRVEYQK 254 Query: 273 IRDI--IDNLARQGYVY-----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 I D+ I L +G + G++ +S+ + D P+L Sbjct: 255 IYDLLSIKGLNERGESFYNPYLVGVIEDLESQGLAVESEGATAVFLDGYTNRDGSPLPML 314 Query: 326 --KSDGSYTYFAADLAYFKCKYE-------RGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 KSDG + Y DLA + + + D ++YV +G + E V AA Sbjct: 315 VRKSDGGFNYATTDLAAIRHRVQLDPSDGGEKADRVLYVT---DAGQSQHFEMVFAAA-- 369 Query: 377 KKAQINVLLCELVRLY---------RDGMPIKMSKRAGDFITLRHVVDE----------- 416 KKA + E + L DG K + R+GD + L+ ++DE Sbjct: 370 KKAG---FIAEPISLEHVPFGLVQGEDGK--KFATRSGDTVKLKDLLDEAVKIAGEDMKS 424 Query: 417 -------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457 VG +V++ L F + ++ + N Y+ YA Sbjct: 425 RMDNPDQELSEALNDVAKTVGIGAVKYADLSMNRESNYKFSYGRMLSLNG-NTAPYMLYA 483 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS---ELQLIVHLAEYPRVIENATI 514 YAR I R+A D + P+ S+ S E QL+ +L + P ++ Sbjct: 484 YARICGIVRKATGQSEDTKVEW------PEASDIIISHDAEKQLVRNLVKLPDILSEVET 537 Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 P +L YL++ + F+ + + N A +L RL L A+ I + Sbjct: 538 DLYPNRLCDYLFETSQKFNQFYENCSVN------NAETPELKASRLSLCTVSAATIRLLM 591 Query: 575 NIIGVE 580 N++G++ Sbjct: 592 NLLGIQ 597 >gi|213647449|ref|ZP_03377502.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213857447|ref|ZP_03384418.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289824037|ref|ZP_06543635.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 516 Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 133/548 (24%), Positives = 223/548 (40%), Gaps = 88/548 (16%) Query: 81 VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHV 138 V IAG GFIN++L P++L + + + S R + + T+ I ++ + N MHV Sbjct: 14 VEIAGPGFINIFLEPAFLAEQVQQALTSD----RLGVSQPTRQTIVVDYSAPNVAKEMHV 69 Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198 GH R ++GD + F G+ V R ++ D G Q L + W +Q N D+ Sbjct: 70 GHLRSTIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMAL 125 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 G Y A K+ E F E +VK +Q+ R+ + L DI Sbjct: 126 ADLEGFYRD------AKKHYDEDETFAERARNYVVK---LQSGDTYFREMWRKLV---DI 173 Query: 259 FISEDD--FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 ++++ + R + + RD + + + GI+ K+K + + ++F Sbjct: 174 TMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFK 232 Query: 317 ---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VK 365 GD + + K DG Y Y D+A K +YE D ++Y + S + V+ Sbjct: 233 NKEGDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVR 292 Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------- 416 + V +V + ++L +DG P K R G + L ++DE Sbjct: 293 KAGYVPDSVPLEHHMFGMMLG------KDGKPFK--TRTGGTVKLADLLDEALERARRLV 344 Query: 417 ------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 VG +V++ L + + FD+ + + N Y+QYAY Sbjct: 345 AEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAY 403 Query: 459 ARCRSIFRQAKDIFPDLDFD-LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 R S+FR+A D+D L VI E E QL L ++ + Sbjct: 404 TRVLSVFRKA-----DIDEQALASAPVIISEDR----EAQLAARLLQFEETLTVVAREGT 454 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 P+ + YLYD+A +F G + H + A N + RL+L A + GL+ + Sbjct: 455 PHVMCAYLYDVAGLFSGFYEH------CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTL 508 Query: 578 GVESPNEM 585 G+E+ M Sbjct: 509 GIETVERM 516 >gi|325142687|gb|EGC65068.1| arginyl-tRNA synthetase [Neisseria meningitidis 961-5945] gi|325198629|gb|ADY94085.1| arginyl-tRNA synthetase [Neisseria meningitidis G2136] Length = 572 Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 124/588 (21%), Positives = 239/588 (40%), Gaps = 84/588 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P +L + + + ++ +G K V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRPEFLAQNIQT-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ F G V R+ ++ D G Q L + + + +DL + Y Sbjct: 144 RVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203 Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 AD + L +E L + K D S+ + D L ++ + E ++ Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323 ++ ++D+L ++G E D +++F G+ Sbjct: 262 ----DDLQAVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 + K G + Y + DLA +Y G D ++YV+ + + ++L + Sbjct: 303 VQKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPES 360 Query: 381 INVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 + + +DG P K R+GD + L ++ E Sbjct: 361 VGAAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAK 418 Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 VG S+++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 419 IGKTVGIGSIKYADLSKNRTSDYVFDWDAMLS-FEGNTAPYLQYAYTRVQSVFRKAG--- 474 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 ++D V+ + E QL L ++ V+++ P+ LA YLY +A++F Sbjct: 475 ---EWDANAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLF 526 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + P L+ A+ RLQL + GL+++G++ Sbjct: 527 SRFY---EACPILKAESASRNS----RLQLAKLTGDTLKQGLDLLGID 567 >gi|323350712|ref|ZP_08086373.1| arginine--tRNA ligase [Streptococcus sanguinis VMC66] gi|322123132|gb|EFX94823.1| arginine--tRNA ligase [Streptococcus sanguinis VMC66] Length = 562 Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 142/600 (23%), Positives = 246/600 (41%), Gaps = 110/600 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E+P+ G ++ A L++ P IA I +I D V G ++N + Sbjct: 26 LLEQPKSSELGDIAF-PAFSLAKTERKAPQIIAADIAEKIDT-AHFDKVVATGP-YVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 LS + + +++ ++ G +YG+ G + I+ S N P VGH R V+GD L+ Sbjct: 83 LSKAEISGQVIKEVIKDGADYGQQNEGNNQNITIDLSSPNIAKPFSVGHLRSTVIGDALS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY + ++ D G Q L ++ W Q+A+ N P +Y++ + Sbjct: 143 NIFRKIGYNTIKINHLGDWGKQFGLLMVAYKKWGSQEAVEAN----PIDELLKLYVR-IN 197 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 E+ + S L+ W ++D +A + + RD+ L N +++ E D Sbjct: 198 AEIENDPS---LDEEGRLWFKKLEDGDPEATELWQWFRDESLTEFNRIYELLGVEFDSLN 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323 G+ + + I L +G + E SK D+ +D + P Sbjct: 255 GEAFYNDKMDEGIQILEDKGLLQE-------SKGASIVDL-------------EDFNLPP 294 Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374 + KSDG+ Y D+A Y Y F +YV+G + + + ++L+AV + Sbjct: 295 AMIKKSDGATLYITRDIATAIYRARTY--NFVKNVYVVGQEQANHFRQLKAVLKKMGFDW 352 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 S+ ++ L R K+S R G+ I L + E Sbjct: 353 SDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLLEAISRAKSQIEAKNPDLEN 405 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG +V+F L DFD V + + P Y+QYAYAR +SI R+A Sbjct: 406 KEAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQSILRKA 463 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 F + S D ++I L ++ RV++ A EP +A Y L Sbjct: 464 N----------FHPDAKATYSLNDPESWEIIKLLQDFGRVVKRAADNYEPSLIAKYAISL 513 Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A F+ +++H R E+P RL L ++ A ++ L ++GVE+P +M Sbjct: 514 AQAFNKYYAHTRILDESPERD-----------SRLALSYSTAVVLKEALRLLGVEAPEKM 562 >gi|170017359|ref|YP_001728278.1| arginyl-tRNA synthetase [Leuconostoc citreum KM20] gi|229470720|sp|B1MZ82|SYR_LEUCK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|169804216|gb|ACA82834.1| Arginyl-tRNA synthetase [Leuconostoc citreum KM20] Length = 563 Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 139/590 (23%), Positives = 245/590 (41%), Gaps = 91/590 (15%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +E P+ G ++ L++ L P IA IV RI D +A ++N +L Sbjct: 27 LESPKSSDLGDVAF-PTFTLAKLLRQAPQQIASDIVNRI--DQSNFEKVVATGPYVNFFL 83 Query: 94 SPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 + L +I+ G +G N G G V I+ S N PM +GH R V+G+ LA+ Sbjct: 84 DKKMTSQATLKTILTQGAAFGDNNDGDGANVTIDMSSPNIAKPMSMGHLRSTVIGNALAN 143 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 + A +GY + ++ D G Q L Y + ++++ P L E Sbjct: 144 ITAKNGYHPIKINHLGDWGTQFGKLI------YAYKTWGTEAEVKAD--PIATLLRYYVE 195 Query: 213 LADKYS-SELLNFPEEKWLPIVKDYSVQA--MMKIIR-DDLKALNIQHD-IFISEDDFHR 267 +K + LN W ++D +A + R + LK +D + IS D F+ Sbjct: 196 FHEKAKIDDSLNDAGRAWFKKLEDGDEEAHQLWTWFRAESLKEFTEIYDRLEISFDSFN- 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + ++D LA + + E S+ Q D+ M+ Sbjct: 255 GEAFYNDKMDKVVDMLAEKSLLVE-------SQGAQIVDLSDINPNLTPAMIK------- 300 Query: 325 LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV----------- 370 ++DG+ Y DLA Y K Y F +YV+G + + +++AV Sbjct: 301 -RTDGATLYMTRDLAAAVYRKETY--NFAKSLYVVGGEQREHFVQMKAVLSLMGFDWADD 357 Query: 371 ------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 +S +K + VLL +++ D ++ ++ D V ++VG Sbjct: 358 VEHIAFGLITFNGKKMSTRKGDV-VLLKDVLNDAHDLALKQIQEKNPDLADKATVAEQVG 416 Query: 419 SDSVRFMMLWRKNSELLDFDFCKV-KEQSKENPVFYVQYAYARCRSIFRQAKDIFP--DL 475 + +V F L + DF+ +V + + P YVQY AR +SI R+A +L Sbjct: 417 AGAVVFHDLMNDRTNNFDFNLEEVVRFEGDTGP--YVQYTNARAKSILRKANTAVSVDEL 474 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + D DT+ +I L ++P +++ A +E +A Y L+ F+ + Sbjct: 475 NLD-------------DTATWDIITTLNQFPTIVQRAWQQREASIIAKYALSLSRAFNKY 521 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++ + + + +L RL LV AV I++ L ++GV++P EM Sbjct: 522 YANSK-------ILLPDDQLNA-RLALVKAVTIILSESLRLLGVKAPEEM 563 >gi|228997281|ref|ZP_04156904.1| Arginyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17] gi|228762476|gb|EEM11400.1| Arginyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17] Length = 562 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 142/611 (23%), Positives = 250/611 (40%), Gaps = 133/611 (21%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG---FI 89 +IE P+ G + M L++ P IA+ I ++ +S F K ++ Sbjct: 27 LIETPKQDEFGDAAFPCFM-LAKQYKKAPAIIAKEIAEKLN-----NSFFTKVKAVGPYV 80 Query: 90 NLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 N++ + + +L +I+V EYG+ G+ V I++ S N P +GH R ++G+ Sbjct: 81 NVFFNRHIVSDDVLKAILVEKEEYGQGYFGREKTVVIDYSSPNIAKPFSMGHLRSTMIGN 140 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 +L + GYEV YI D G Q L + Y++ + N+ + E ++ + Sbjct: 141 SLKHIAEKCGYEVVGINYIGDWGTQFGKLITA----YKK--WGNEELVKEDPIRELFKLY 194 Query: 209 VGKELADKYSSELLNFPE-----EKWLPIVKDYSVQAMM---KIIRDDLKALNIQHDIFI 260 V + E+ +PE W ++D +A+ + LK + +++ Sbjct: 195 V------HFHEEVKEYPELEEEGRAWFKKLEDGDEEAVFLWNWFRHESLKEFSRIYELLG 248 Query: 261 SEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 E +G+ + D +D L +G + E S Q +++++ + Sbjct: 249 VEFTNFQGEAFYNDKMGDFVDILEEKGLLEE-------SDGAQVVNLEKEDM-------- 293 Query: 318 DDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372 P L KSDG+ Y DL Y + YE FD +YV+G++ S + + V Sbjct: 294 ----PPCLIKKSDGATLYATRDLTAALYRQNTYE--FDKALYVVGAEQSLHFTQFFTVLK 347 Query: 373 AVS----EKKAQINVLLCELVRLYRDGMPIKMSKRAG----------------------- 405 + + A + L + +DG KMS R G Sbjct: 348 KLGYNWVDGMAHVPFGL-----ILKDGK--KMSTRKGKVVLLEEVLEEAITLAERNIEEK 400 Query: 406 --DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCR 462 D V +VG +V F L + ++F K +K + + P YVQY +AR Sbjct: 401 NPDLKQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLEKMLKFEGETGP--YVQYTHARAC 458 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL--------IVHLAEYPRVIENATI 514 SI R+ + +EF+T QL I L +P+V+E A Sbjct: 459 SILRK-------------------ENAEFETEAFQLNDDHSWSTIKLLNRFPQVVETAFF 499 Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 EP +A YL D+A F+ ++ + +R ++ + K + RL LV+ V ++ GL Sbjct: 500 KNEPSHIAKYLLDVAQAFNKYYGN------VRILEEDKEKES--RLALVYVVTIVLKEGL 551 Query: 575 NIIGVESPNEM 585 ++G+ +P EM Sbjct: 552 RLLGMGAPEEM 562 >gi|124024435|ref|YP_001018742.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303] gi|166232822|sp|A2CDB7|SYR_PROM3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|123964721|gb|ABM79477.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303] Length = 603 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 142/602 (23%), Positives = 246/602 (40%), Gaps = 104/602 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98 G NAA+ L++PL P IA IV ++ +D +++ IAG GFINL + P L Sbjct: 47 GDFQANAALPLAKPLKQPPRQIAAAIVDQLMVDTAFNAICLTPDIAGPGFINLTVRPECL 106 Query: 99 RKILSSIVVSG-----IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + + + + G N + T V ++F S N MHVGH R ++GD+LA + Sbjct: 107 AAEVQARLADARLGVPLVEGDNDGQQPTPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARV 166 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKE 212 + F G+ V R ++ D G Q L + +AL D+ DL + V+ + + Sbjct: 167 LEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALETADAVDLGDLV---VFYRQAKQR 223 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKII---RDDLKALNIQHDIFISEDDFHRGD 269 D + + + E L S++A + R + + + + D+ ++E RG+ Sbjct: 224 FDDDEAFQTTSREEVVKLQGGDPLSLKAWSLLCDQSRREFQKIYDRLDVRLNE----RGE 279 Query: 270 P---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL-- 324 + + ++++L G + D Q +F + G D +PL Sbjct: 280 SFYNAYLESVVEDLNVSGLLVSD---------------DGAQCVFLEGVTGKD-GKPLPV 323 Query: 325 --LKSDGSYTYFAADLAYFKCKYER-----GFDNMIYVMGSDHSGYVKRLEAVA--AAVS 375 KSDG + Y DLA + ++ G +IYV + + + + VA A Sbjct: 324 IVQKSDGGFNYATTDLAAMRYRFAAPPQGDGARRVIYVTDAGQANHFAGVFQVAQRAGWI 383 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416 ++ + LV+ DG K+ RAGD + LR ++DE Sbjct: 384 PDAGRLQHVPFGLVQ-GEDGK--KLKTRAGDTVRLRELLDEAVERAESDLRRRLQEEGRD 440 Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 VG +V++ L + F F ++ + N Y+ YA R I Sbjct: 441 EDESFIEQVATTVGLAAVKYADLSQNRITNYQFSFDRMLA-LQGNTAPYLLYAVVRIAGI 499 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 R+ D+ +V E +F +T E L+ L ++ VI P +L Sbjct: 500 ARKGGDL-----------DVTTAELQFSETQEWALVRELLKFDAVIAEVEEELLPNRLCT 548 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 YL++L+ VF+ + + P L+ Q + RL L A + GL+++G+ + Sbjct: 549 YLFELSQVFNRFYD---QVPVLKAEQPSRS----CRLALCRLTADTLKLGLSLLGIPTLE 601 Query: 584 EM 585 M Sbjct: 602 RM 603 >gi|291529278|emb|CBK94864.1| arginyl-tRNA synthetase [Eubacterium rectale M104/1] Length = 597 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 133/610 (21%), Positives = 251/610 (41%), Gaps = 105/610 (17%) Query: 36 RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95 RP C N AM ++ P I++ + A ++ D +SV GF+N+ + Sbjct: 33 RPDLC---EFQCNGAMAAAKEYKCAPFMISDKVAALLESDEMFESVESVKPGFLNIKMDT 89 Query: 96 SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155 ++L K ++ + YG K + +++ N P+HVGH R AV+G+++ + Sbjct: 90 AFLAKYMNDMKDDEGRYGLEKAKKPLTIVVDYGGPNVAKPLHVGHLRSAVIGESVKRIAK 149 Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP-----------GV 204 F G+ V + ++ D G Q+ + + R +Y ++S G YP + Sbjct: 150 FMGHNVIGDVHLGDWGLQMGLIITELRERKPDLVYFDES--YTGEYPKEAPFTISELEDI 207 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYS--VQAMMKIIRDDLK----ALNIQHDI 258 Y GK +D+ E ++ + Y + +M + DLK LN+ ++ Sbjct: 208 YPTASGKSKSDESFKEAALLATKELQGGRRGYQALLSHIMNVSVTDLKRNYENLNVHFEL 267 Query: 259 FISEDDFHRGDPSP-IRDIIDNLARQGYVY--EGILPPPKSKTTQKCDMDRKQLLFRSTM 315 + E D P + +++ + +G+ + EG L K D D K++ Sbjct: 268 WKGE-----SDAQPYVSGMVEMMKEKGFAHMSEGALV-----VDVKEDTDTKEI------ 311 Query: 316 VGDDVDRP---LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVA 371 P +LKSDG+ Y DLA + E D +IY+ + S + ++ A Sbjct: 312 -------PPCIILKSDGASLYSTTDLATLVMRMKENNPDRVIYLADARQSMHFIQVFRCA 364 Query: 372 AAVSEKKAQINVLLCELVRL------YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425 +K I ELV + +DG P K R G + L +++ E+ + + + Sbjct: 365 -----RKTGIVPDTTELVHIGFGTMNGKDGKPFKT--RDGGVMRLEYLLKEIDDEMLNKI 417 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNV 484 +K E L+ D + ++ +K + V+Y ++ +KD D+D F F N Sbjct: 418 KENQKEKENLNIDEAEAEQTAKTVALAAVKYGDLSNQA----SKDYIFDIDRFTSFEGNT 473 Query: 485 IP----------------QESEFDTSELQ-------------LIVHLAEYPRVIENATIA 515 P + D S L+ L++ LA++ IE+A Sbjct: 474 GPYILYTIVRIKSILSKYEAKGGDISALKDAIMPAVNAGQKNLMLSLAKFNATIESAYEE 533 Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575 P+K+ Y+Y+LA+ F+G + + + N +L + L+ I+ + ++ Sbjct: 534 SAPHKICAYIYELANAFNGFYHD------TKILSEENEELKKSYISLLVLTKEILEACID 587 Query: 576 IIGVESPNEM 585 ++G +P+ M Sbjct: 588 MLGFSAPDRM 597 >gi|324507191|gb|ADY43051.1| Arginyl-tRNA synthetase [Ascaris suum] Length = 756 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 146/589 (24%), Positives = 250/589 (42%), Gaps = 85/589 (14%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N++M++S+ LG P +A++I+ I ++ V +AG G++N++L+ Sbjct: 207 GDYQFNSSMVISQKLGQRGIKTPPRDVAKVILDNIPPCEKIEKVEVAGPGYVNVFLNKKA 266 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + I++ + G+ R I K +V ++F S N MHVGH R ++GD++ L Sbjct: 267 IAAIIARTAIKGVSMPR--ISK-RRVVVDFSSPNIAKEMHVGHLRSTIIGDSICRLFELV 323 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217 G++V R +I D G Q L + R+ L ++ P P L+ KE ++ Sbjct: 324 GFDVIRLNHIGDWGTQFGMLIAHLQNRFPNFL----TETP----PIADLQAFYKESKKRF 375 Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR-GDPSPIRDI 276 + EK+ D V+ + D +KA + D+ S DF R D IR I Sbjct: 376 DED------EKFKARAHDCVVK-LQSYDADFVKAWQMICDV--SRKDFTRIYDRLDIRII 426 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336 + + ++ K K D D ++L+F S G ++ ++KSDG TY + Sbjct: 427 ERGESFYRNMMADVVRELDEKGVLKLD-DGRKLMFPS---GCEIPLTVVKSDGGNTYDTS 482 Query: 337 DLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395 DLA K + E D +IYV+ S S +++ + A A + K CE R+ Sbjct: 483 DLAAIKHRLEVEKADWIIYVVDSGQSLHLETIFAAARDLGWYK-------CEEKRVEHVS 535 Query: 396 MPI-------KMSKRAGDFITLRHVVDE-----------------------------VGS 419 + K R+GD I L ++DE V Sbjct: 536 FGLVLGEDRKKFKTRSGDTIRLTDLLDEGIRRAAAKLQEKERDKVMSPQELEEARDAVAY 595 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA---KDIFPDLD 476 V++ L + ++ F F K+ + + N Y+ YAYAR RSI R A ++ D Sbjct: 596 GCVKYADLSQTRTQDYVFSFDKMLD-DRGNTAVYLLYAYARIRSICRNAGISREQIIDYA 654 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 +L P +P E E +E +L + ++ I +++ Y+Y LA+ FH + Sbjct: 655 QNL-PEGALPLEHE---AEYKLAKTILKFSDCILTVLDTLFLHQVCDYVYSLATTFHDFY 710 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + R N + RL L A ++ + I+G+ + M Sbjct: 711 NDCYVIHKDR---EGNTTIYYHRLVLCQVTADVMANCFQILGIRNVQRM 756 >gi|90580068|ref|ZP_01235876.1| arginyl-tRNA synthetase [Vibrio angustum S14] gi|90438953|gb|EAS64136.1| arginyl-tRNA synthetase [Vibrio angustum S14] Length = 576 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 134/609 (22%), Positives = 238/609 (39%), Gaps = 135/609 (22%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-- 100 G N M +++ LG +P A+ ++ +++D + V IAG GFIN++L+ ++L + Sbjct: 37 GDYQANGVMGVAKKLGTNPREFAQKVIDCLELDGIAEKVEIAGPGFINIFLNKAWLAERG 96 Query: 101 ---ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + E +N++ +++ + N MHVGH R ++GD + + F Sbjct: 97 EEALKDERLAVNTETAQNIV-------VDYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFL 149 Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198 G+ V R ++ D G Q L L F+R + LY+ D + + Sbjct: 150 GHNVIRANHLGDWGTQFGMLIANMQRKEQEGTDVSMDISDLEGFYRESKVLYDEDEEFGK 209 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 V G E + EKW +V ++ D ++++ D Sbjct: 210 TARNFVVRLQSGDE-----------YCLEKWKQLV---AITLKQNQRNYDRLSVSLTDDN 255 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEG------ILPPPKSKTTQKCDMDRKQLLFR 312 + E ++ P + D L +G E L K+K Sbjct: 256 VMGESMYNDMLPGVVAD----LKEKGLAVESDGAIVVYLDEYKNKD-------------- 297 Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------V 364 G+ + + K DG Y Y D+A K +YE+ D ++Y + S + V Sbjct: 298 ----GEPMGVIIQKRDGGYLYTTTDIACAKYRYEQLHADRVLYFIDSRQHQHLMMAWEIV 353 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 ++ V +VS + ++L +DG P K RAG + L ++DE + + Sbjct: 354 RKAGYVPESVSLEHHAFGMMLG------KDGRPFKT--RAGGTVRLADLLDEAVERANK- 404 Query: 425 MMLWRKNSEL-----------LDFDFCKVKEQSKE-----------------NPVFYVQY 456 ++ KN EL + K + SK N Y+QY Sbjct: 405 -LIEEKNPELSTEEKANIAQTVAMAAVKYSDLSKHRTTDYIFDWDNMLAFEGNTAPYMQY 463 Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 AY R SIF++A DL + VI D E L+ L ++ +++ Sbjct: 464 AYTRVASIFKRANVELVDLTHPI----VIT-----DEKEQALLSKLLQFEEAVQSVAREG 514 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 +P+ + YL++LA +F + P L +A + RL+L + I GL++ Sbjct: 515 QPHLMCTYLFELAGMFSSFYEAC---PILNAEEA----VKQSRLKLALLTSKTIKQGLDL 567 Query: 577 IGVESPNEM 585 +G+E+ M Sbjct: 568 LGIETLERM 576 >gi|50284863|ref|XP_444859.1| hypothetical protein [Candida glabrata CBS 138] gi|49524161|emb|CAG57752.1| unnamed protein product [Candida glabrata] Length = 605 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 129/587 (21%), Positives = 227/587 (38%), Gaps = 108/587 (18%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIE 111 L R G +P IA + ++ V G F+ + P +L K ++ ++ G E Sbjct: 73 LVRTKGSNPREIATEWAEKFPCGDFLEKVEANG-AFVQFFFKPEFLYKTVIPDVITRGEE 131 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG + K+ IEF S N P H GH R ++G L++L G++VTR Y+ D G Sbjct: 132 YGACKMVDNKKIIIEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEKLGWDVTRMNYLGDWG 191 Query: 172 AQINTLALS--------------------VFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 Q LA+ V+ R + + LPE + K Sbjct: 192 KQFGVLAVGFERYGDEEKLAKDPIHHLYEVYVRINKDIEEEGDSLPESESTNGKAREYFK 251 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 + D L K +D+S++ + D LNI++D++ E + Sbjct: 252 RMEDGDPEAL------KIWKRFRDFSIEKYI----DTYARLNIKYDVYSGESQVSK---E 298 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGS 330 ++ + + +E DR L T + + ++ KSDG+ Sbjct: 299 SMQTALKMFHEKNLTHE----------------DRGATLIDLTKFNKKLGKVIVQKSDGT 342 Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSD---HSG------------YVKRLEAV---- 370 Y D+ +YE+ FD MIYV+ + H+ + +L+ V Sbjct: 343 TLYLTRDVGAAMDRYEKYHFDKMIYVIATQQDLHTAQFFEILKQLGFDWANKLQHVNFGM 402 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMML 427 +S +K + V L ++ ++ M M K + + + V D VG +V + Sbjct: 403 VQGMSTRKGTV-VFLDNILEETKEKMHEVMKKNEAKYAQIDNPDEVADLVGISAVMIQDM 461 Query: 428 WRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 K +F + ++ + P Y+QYA++R RS+ R A + IP Sbjct: 462 QSKRINNYEFKWERMLSFEGDTGP--YLQYAHSRLRSVERNAAE--------------IP 505 Query: 487 QE--SEFDTSELQ------LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 +E + D S+L+ L+ L +YP V+ NA EP + YL+ L + Sbjct: 506 KEKWASADFSQLKEPAAALLVRLLGQYPDVLRNAMKTNEPATVVTYLFKLTHQVSSCYD- 564 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +V ++ RL L A ++ +G+ ++G+ M Sbjct: 565 ------VLWVAGQTEEVATARLALYGAARQVLYNGMRLLGLTPVERM 605 >gi|257466459|ref|ZP_05630770.1| arginyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563] gi|315917616|ref|ZP_07913856.1| arginyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563] gi|313691491|gb|EFS28326.1| arginyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563] Length = 570 Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 127/579 (21%), Positives = 235/579 (40%), Gaps = 83/579 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AM+ S+ +G +P IAE I + + ++ + IAG GFIN++L +YL + Sbjct: 39 GDFQCNFAMMNSKIIGKNPRMIAEEIQQNLIENEVIEKLEIAGPGFINIFLKEAYLSSFI 98 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 I E+ + + + V I+F S N MH+GH R ++GD + + + GY V Sbjct: 99 KKI--GKEEFDFSFLDRKGDVIIDFSSPNIAKRMHIGHLRSTIIGDAICRIYRYLGYHVV 156 Query: 163 REYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYY----PGVYLKHVGKELADKY 217 + +I D G Q L + W + A N + E Y +E A Sbjct: 157 GDNHIGDWGTQFGKLIIGYHKWLDKDAYQRNAIEELERVYVKFSQEAEEHPELEEEARLE 216 Query: 218 SSELLNFPEEK---WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274 +L + EE W +K S++ K+ L++ D F E +H P ++ Sbjct: 217 LKKLQDGDEENHNLWKEFIK-VSMEEYQKL----YDRLDVHFDTFYGESFYHPIMPEVVK 271 Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334 +++D + ++ P+ + C + +K DG++ Y Sbjct: 272 ELVDKGIAKEDDGAKVVFFPEEENLFPCIVQKK--------------------DGAFLYA 311 Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393 +D+A K + +++IY+ + K+ V + + +V + + Sbjct: 312 TSDIATVKFRLNTYDVNHLIYLTDERQQDHFKQFFRVTEMLGWDVKKYHVWFG--IMRFA 369 Query: 394 DGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMM 426 DG+ S R G+ I L ++DE VG ++++ Sbjct: 370 DGV---FSTRKGNVIRLEELLDEGKRRAYEIVKEKNPSLPEEEKQHIAEVVGVGAIKYAD 426 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 L + + F++ K+ + N Y+QY+YAR +S+ +AKD+ D +I Sbjct: 427 LSQNRQSPIIFEWDKIL-SFEGNTAPYLQYSYARVQSVLDKAKDLGKAATEDTC---LIL 482 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 + D E L ++ +P + A +P +A YLYDL+ + +++ P L Sbjct: 483 K----DKYERSLANYMTIFPSSVLKAAETCKPNLIADYLYDLSKKLNSFYNNC---PILN 535 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R L II GL+++G+++ + M Sbjct: 536 ----QEDDILKSRAYLAKQAGEIIKQGLSLLGIQTLDRM 570 >gi|125625076|ref|YP_001033559.1| arginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363] gi|166232798|sp|A2RNI8|SYR_LACLM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|9295534|gb|AAF86984.1|AF282249_3 ArgS [Lactococcus lactis subsp. lactis] gi|124493884|emb|CAL98878.1| ArgS protein [Lactococcus lactis subsp. cremoris MG1363] gi|300071881|gb|ADJ61281.1| arginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000] Length = 564 Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 140/592 (23%), Positives = 249/592 (42%), Gaps = 93/592 (15%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IE+P+ G L+ A L++ L P IA I KID IA ++N + Sbjct: 27 IIEKPKSSDLGDLAF-PAFQLAKTLRKSPQIIAGEIAE--KIDTKGFEKVIAVGPYVNFF 83 Query: 93 LSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + +++ ++ G YG IG+G V I+ + N P +GH R V+GD++A Sbjct: 84 LDKNATASEVIREVLAEGEHYGDANIGEGGNVPIDMSAPNIAKPFSIGHLRSTVIGDSIA 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGVYLKHV 209 + GY+ + ++ D G Q L ++ + +Y + + N D Y + + Sbjct: 144 KIYEKLGYQPIKINHLGDWGKQFGLL-ITAYKKYGDEATITANPIDELLKLYVKINAEAK 202 Query: 210 GKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 D+ + + +E+ L I K +S ++++ R K L + D F+ E + Sbjct: 203 EDSEVDEEGRQWFLKMEQGDEEALRIWKWFSDVSLIEFNRIYGK-LGVTFDHFMGESFY- 260 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL- 325 + I+++L + ++E SK D+++ L P L Sbjct: 261 ---SDKMDAIVEDLENKNLLHE-------SKGALIVDLEKYNL------------NPALI 298 Query: 326 -KSDGSYTYFAADL---AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--AAAVSEKKA 379 K+DG+ Y DL AY K + F +YV+G + + + K+L+AV A Sbjct: 299 KKTDGATLYITRDLATAAYRKKTF--NFVKSLYVVGGEQTNHFKQLKAVLKEAGYDWSDD 356 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 ++V + + + K S R G + L +DE Sbjct: 357 MVHVPFGMVTQGGK-----KFSTRKGHVVKLEMALDEAVDRAEKQIEAKNPNLENKEEVA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +V+F L + DFD + V + + P YVQYA+AR +SI R+A Sbjct: 412 KQVGVGAVKFYDLKTDRNNGYDFDLDEMVSFEGETGP--YVQYAHARIQSILRKAN---R 466 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 ++ D V D +++ L E+P +++ A EP +A Y LA F+ Sbjct: 467 KVNIDNISLVV------SDAEAWEIVKALKEFPNIVKRAADNYEPSIIAKYAISLAQAFN 520 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R + ++ +L RL L+ A + ++ L ++GV +P M Sbjct: 521 KYYAHVR-------ILEDDAQLD-GRLALISATSIVLKEALRLLGVAAPENM 564 >gi|294635811|ref|ZP_06714268.1| arginine--tRNA ligase [Edwardsiella tarda ATCC 23685] gi|291090846|gb|EFE23407.1| arginine--tRNA ligase [Edwardsiella tarda ATCC 23685] Length = 577 Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 137/593 (23%), Positives = 246/593 (41%), Gaps = 102/593 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ + + P +AE +VA + +D V IAG GFIN++L ++L + Sbjct: 37 GDYQANGIMAAAKKMAMPPRQLAEQVVANLALDGIASKVEIAGPGFINIFLDAAWLADQV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + ++ G + T V +++ + N MHVGH R ++GD + F G+ V Sbjct: 97 DA-ALADPRLGVARVAPQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGYYPG 203 R ++ D G Q L L F+R + Y+ D+ E G Sbjct: 155 RANHVGDWGTQFGMLIAYLERVQSESQAGEMALADLEAFYREAKKHYDEDAAFAE-RARG 213 Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI--QHDIFIS 261 +K G D+Y E+ W + V M+ + + LN+ D + Sbjct: 214 YVVKLQG---GDEYCREM-------WRKL-----VDITMRQNQRNYDRLNVTLTDDDVMG 258 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E ++ P I+ +L +G E S+ +D F++ G+ + Sbjct: 259 ESLYNPMLPG----IVADLKAKGLATE-------SEGATVVFLDE----FKNKE-GEPMG 302 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAA 373 + K DG Y Y D+A K +YE G + ++Y + S + V++ V + Sbjct: 303 VIVQKKDGGYLYTTTDIACAKYRYETLGANRILYYIDSRQHQHLMQAWAIVRKAGYVPES 362 Query: 374 VSEKKAQINVLLCELVRLY--RDGMPIKM-------SKRAGDFIT----------LRHVV 414 VS + ++L + + + R G IK+ ++RA I L+ +V Sbjct: 363 VSLEHHMFGMMLGKDGKPFKTRAGGTIKLADLLDEATERAAKLIADKNPELSGDELKELV 422 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 + VG +V++ L + + FD+ + + N Y+QYAY R SIF++A Sbjct: 423 EVVGIGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVASIFKRA-----G 476 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE--PYKLAFYLYDLASVF 532 +D + VI E E L L ++ I T+A+E P+ + YLY++A +F Sbjct: 477 IDENSLSGAVILTEER----EKALATRLMQFEETI--LTVAREGTPHVMCAYLYEVAGLF 530 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + A++ + RL+L A + +GL+ +G+++ M Sbjct: 531 SSFYEA------CPILNADDEHVRASRLKLAALTARTLKTGLDTLGIKTVERM 577 >gi|319940118|ref|ZP_08014472.1| arginine-tRNA ligase [Streptococcus anginosus 1_2_62CV] gi|319810832|gb|EFW07159.1| arginine-tRNA ligase [Streptococcus anginosus 1_2_62CV] Length = 562 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 145/600 (24%), Positives = 242/600 (40%), Gaps = 110/600 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E+P+ G ++ A L++ P IA I KID +A ++N + Sbjct: 26 LLEQPKSSELGDIAF-PAFSLAKVERKAPQAIAADIAE--KIDSTNFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + +++ IV G +YG+ G G + I+ S N P VGH R V+GD L+ Sbjct: 83 LDKSKISAQVIKEIVKEGNDYGQQDEGHGENITIDLSSPNIAKPFSVGHLRSTVIGDALS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY + ++ D G Q L ++ W ++A+ N D LK Sbjct: 143 NIFRKLGYNTIKINHLGDWGKQFGLLMVAYKKWGSKEAVEANPID--------ELLKLYV 194 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 + A+ + L+ W ++D +A + + RD+ LK N + + E D Sbjct: 195 RINAEIETDPELDDEGRLWFKKLEDGDPEATELWQWFRDESLKEFNRIYKLLGVEFDSLA 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323 G+ + + I L +G + E SK ++D DV+ P Sbjct: 255 GEAFYNDKMDEGIKILEEKGLLEE-------SKGASIVNLD-------------DVNLPP 294 Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374 + KSDG+ Y D+A Y Y F IY +G + + + ++L+AV + Sbjct: 295 AMIKKSDGATLYITRDIATAMYRARTY--NFVKNIYAVGQEQANHFRQLKAVLKKMGFDW 352 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 S+ ++ L R K+S R G+ I L + E Sbjct: 353 SDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLQEAISRAQSQIEAKNPDLEN 405 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG +V+F L DFD V + + P Y+QYAYAR +SI R+A Sbjct: 406 KEAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQSILRKA 463 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 F + S D ++I L ++ RV++ A +P +A Y L Sbjct: 464 D----------FKPSAEATYSLDDAESWEIIKLLQDFARVVKRAADNYDPSLIAKYAISL 513 Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A F+ ++H R E+P RL L +A A ++ L ++GV++P +M Sbjct: 514 AQAFNKFYAHTRILDESPERD-----------SRLALSYATAVVLKESLRLLGVDAPEKM 562 >gi|320581220|gb|EFW95441.1| Arginyl-tRNA synthetase [Pichia angusta DL-1] Length = 680 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 145/624 (23%), Positives = 257/624 (41%), Gaps = 133/624 (21%) Query: 48 NAAMILSRP---LGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILS 103 N +I+ P L D + +A+ + + + + V GK F+ + +P +L K ++ Sbjct: 104 NGDLIVPLPRLRLKGDLVALAKELAEKFPLGGYLKKVHPEGK-FLQFFFNPEFLLKYVVK 162 Query: 104 SIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR 163 ++ ++G +GKG +V IEF S N P H GH R ++G L++L G+EV R Sbjct: 163 DVLERKQDFGSCPLGKGKRVVIEFSSPNIAKPFHAGHLRSTIIGGFLSNLYERLGWEVIR 222 Query: 164 EYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGVYLK-------------H 208 Y+ D G Q LA+ F +Y + L +N P + VY++ Sbjct: 223 MNYLGDWGKQFGLLAVG-FEKYGSEAELESN----PIQHLFDVYVRINQDVKAEEEEAEK 277 Query: 209 VGKELADKYSS---------ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259 G L D+ SS + + +++ L + + + ++ K I D LNI++D++ Sbjct: 278 TGVPL-DEASSVDGAARAFFKRMEQGDKQALGLWEKFRALSIEKYI-DTYARLNIKYDVY 335 Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319 G+ ++++D + ++ L K T DR LL +G+ Sbjct: 336 -------SGESQVSQELMDRVQKE-------LQEKKLVTE-----DRGALLIDFKQLGEK 376 Query: 320 VDRPLL--KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 +L KSDG+ Y DL A + K + FD MIYV+ S +V++ + + Sbjct: 377 KLGKVLVQKSDGTSLYITRDLGAAIERKEKYHFDKMIYVIASQQDLHVRQFFRILEKMGY 436 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE--- 433 A+ +L G+ + MS R G + L +++ V S ++ M +KN+E Sbjct: 437 SWAKDELLHVNF------GLVLGMSTRKGTVVFLDDILETVKSATLEIM---QKNAEKFT 487 Query: 434 ----------LLDFDFCKVKE-QSKENPVF----------------YVQYAYARCRSIFR 466 L+ +++ Q K N + Y+QYA++R RSI R Sbjct: 488 LVEDPEAVADLVGISAVMIQDMQGKRNNNYEFSWDRMLSTEGDTGPYLQYAHSRLRSIER 547 Query: 467 -----QAKDIFPDLDFDLFPRNVIPQESEFDTSELQ--------------------LIVH 501 + K + DL + N++ E + L+ L+ Sbjct: 548 NCNVAEEKLLVADLSIE----NLVGTEDQVKQLGLEPAEQAKKLDILATQREKVESLVRI 603 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 L YP ++ A+ EP L YL+ L F + R V ++ RL Sbjct: 604 LVSYPDILRYASKNHEPSTLVTYLFKLTHQFSSTYKVLR-------VMGEKEQVLEARLA 656 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 L +V ++N+GL ++G+ + M Sbjct: 657 LFSSVRQVLNNGLRVLGITPVDRM 680 >gi|257452602|ref|ZP_05617901.1| arginyl-tRNA synthetase [Fusobacterium sp. 3_1_5R] gi|317059142|ref|ZP_07923627.1| arginyl-tRNA synthetase [Fusobacterium sp. 3_1_5R] gi|313684818|gb|EFS21653.1| arginyl-tRNA synthetase [Fusobacterium sp. 3_1_5R] Length = 570 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 123/575 (21%), Positives = 237/575 (41%), Gaps = 75/575 (13%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AM+ S+ +G +P IAE I + + ++ + IAG GFIN++L +YL + Sbjct: 39 GDFQCNFAMMNSKIIGKNPRMIAEEIQQNLIENEVIEKLEIAGPGFINIFLKEAYLSSFI 98 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 I E+ + + + V I+F S N MH+GH R ++GD + + + GY V Sbjct: 99 KKI--GKEEFDFSFLDRKGDVIIDFSSPNIAKRMHIGHLRSTIIGDAICRIYRYLGYHVV 156 Query: 163 REYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYY---PGVYLKHVGKELADKYS 218 + +I D G Q L + W + A N + E Y +H E + Sbjct: 157 GDNHIGDWGTQFGKLIIGYHKWLDKDAYQRNAIEELERVYVKFSQEAEEHPELEEEARLE 216 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 + L +E+ + K++ ++ M+ + L++ D F E +H P +++++D Sbjct: 217 LKKLQDGDEENYNLWKEF-IKVSMEEYQKLYDRLDVHFDTFYGESFYHPIMPEVVKELVD 275 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 + ++ P+ + C + +K DG++ Y +D+ Sbjct: 276 KGIAKEDDGAKVVFFPEEENLFPCIVQKK--------------------DGAFLYATSDI 315 Query: 339 AYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397 A K + +++IY+ + K+ V + + +V + + DG+ Sbjct: 316 ATVKFRLNTYDVNHLIYLTDERQQDHFKQFFRVTEMLGWDVKKYHVWFG--IMRFADGV- 372 Query: 398 IKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMMLWRK 430 S R G+ I L ++DE VG ++++ L + Sbjct: 373 --FSTRKGNVIRLEELLDEGKRRAYEIVKEKNPSLPEEEKQHIAEVVGVGAIKYADLSQN 430 Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490 + F++ K+ + N Y+QY+YAR +S+ +AKD+ D +I + Sbjct: 431 RQSPIIFEWDKIL-SFEGNTAPYLQYSYARVQSVLDKAKDLGKAATEDTC---LILK--- 483 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550 D E L ++ +P + A +P +A YLYDL+ + +++ P L Sbjct: 484 -DKYERSLANYMTIFPSSVLKAAETCKPNLIADYLYDLSKKLNSFYNNC---PILN---- 535 Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R L +I GL+++G+++ + M Sbjct: 536 QEDDILKSRAYLAKQAGEVIKQGLSLLGIQTLDRM 570 >gi|298368627|ref|ZP_06979945.1| arginine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314] gi|298282630|gb|EFI24117.1| arginine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314] Length = 572 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 124/590 (21%), Positives = 244/590 (41%), Gaps = 88/590 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEALAGNAVIESTEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P +L + + + ++ +G K V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRPEFLAQNIHA-ALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ F G V R+ ++ D G Q L + + + +DL + Y Sbjct: 144 RVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203 Query: 212 ELADKYSSEL--LNFPEEKWLPIVKDY------SVQAMMKIIRDDLKALNIQHDIFISED 263 AD + L +E L + K + QA+ + L++ ++ + ++D Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRSEDVAGESKYNDD 263 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDV 320 ++ ++D+L ++G E D +++F G+ Sbjct: 264 ---------LQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPA 299 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEK 377 + K G + Y + DLA + + R D ++YV+ + + ++L + A + Sbjct: 300 AFIVQKQGGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPE 359 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416 A+ + + + +DG P K R+GD + L ++ E Sbjct: 360 NAKAEFIGFGTM-MGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVTEKNPELGADEA 416 Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 VG +V++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 417 AKIGKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG- 474 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 ++D V+ + E QL L ++ V+++ P+ LA YLY A+ Sbjct: 475 -----EWDAAAPTVLTE-----PLEKQLATELLKFEDVLQSVADTAYPHYLAAYLYQTAT 524 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 +F + P L+ A RLQL + GL+++G++ Sbjct: 525 LFSRFY---EACPILKAEGATRNS----RLQLAKLTGDTLKQGLDLLGID 567 >gi|222153884|ref|YP_002563061.1| arginyl-tRNA synthetase [Streptococcus uberis 0140J] gi|254782986|sp|B9DW76|SYR_STRU0 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|222114697|emb|CAR43791.1| arginyl-tRNA synthetase [Streptococcus uberis 0140J] Length = 562 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 146/591 (24%), Positives = 244/591 (41%), Gaps = 92/591 (15%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G ++ A L++ L P IA + KID +A +IN + Sbjct: 26 LLETPKNSDMGDVAF-PAFSLAKVLRKAPQMIAGELAE--KIDAAQYEKVMAVGPYINFF 82 Query: 93 LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + K +L +++ YG+ IG G V ++ S N P VGH R V+ D + Sbjct: 83 LDKSSISKEVLEAVIKEKANYGQQHIGDGQNVTLDMSSPNIAKPFSVGHLRSTVIADAIG 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + + GY R ++ D G Q L ++ W + + N D LK Sbjct: 143 HIYSKLGYNSIRINHLGDWGKQFGMLIVAYKLWGDRATVEANPID--------ELLKLYV 194 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHD-IFISEDDFH 266 + A+ + L+ +W ++D +A + + RD+ L N +D + +S D FH Sbjct: 195 RINAEAEENPELDEQARQWFKKLEDGDKEAWDLWQWFRDESLVEFNRIYDKLDVSFDHFH 254 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL- 325 + D +D + + E +SK Q D+++ L P L Sbjct: 255 --GEAFYNDKMDEGIQ---ILEDKNLLKESKGAQIVDLEKYNL------------PPALI 297 Query: 326 -KSDGSYTYFAADLAYFKCKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAVS--EKKAQ 380 KSDG+ Y D+A + +R F+ IYV+G + S + K+L+AV + Sbjct: 298 KKSDGATLYITRDMATAMYR-QRTFNFVKNIYVVGQEQSHHFKQLKAVLKEMGFDWSDDM 356 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416 I+V + + + K+S R G+ I L +DE Sbjct: 357 IHVSFGLVTKNKK-----KLSTRKGNIIRLEPTLDEAVSRALTQIEAKNPDLENKEDVAH 411 Query: 417 -VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 VG +V+F L DFD V + + P YVQY YAR +SI R+A Sbjct: 412 AVGVGAVKFYDLKTDRDNGYDFDLEAMVSFEGETGP--YVQYTYARIQSILRKA------ 463 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 D P P S D ++I L + IE A +P +A + LA F+ Sbjct: 464 ---DFTPNEETPY-SLNDAESWEIIKLLQGFAANIERAAEKYDPSIIAKFAIQLAQSFNR 519 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R + + + + RL L +A A ++ L ++GV++P +M Sbjct: 520 YYAH------TRILDESEERDS--RLALCYATAVVLKESLRLLGVQAPEKM 562 >gi|91201635|emb|CAJ74695.1| similar to arginyl-tRNA synthetase [Candidatus Kuenenia stuttgartiensis] Length = 565 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 141/578 (24%), Positives = 243/578 (42%), Gaps = 103/578 (17%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI-LSSIVVSGIE 111 LS+ L P IA + + ++ + G ++NL+L + + L IV G Sbjct: 46 LSKMLKKPPAKIASELADLLHPVSPINKIEATGP-YLNLFLDKAIFSAVVLKKIVNEGDT 104 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG + IGKG V I++ S N + V H R A++G+ L ++ GY+ ++ D G Sbjct: 105 YGCDTIGKGKTVVIDYSSPNIAKHLAVHHLRSALIGNALYNIYGNLGYKCIGINHLGDWG 164 Query: 172 AQINTLALSVF-WRYQQALYNNDSDLPEGYYP-------GVYLKHVGKELADKYSS---E 220 Q L ++ W + + +DL + Y +L+ +E K + E Sbjct: 165 TQFGQLIVAYRKWGEKDLEQHTITDLNKLYVTFHREAEKDNHLEDEAREWFKKLEAGDAE 224 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280 + E KD S++ +I K L I D F+ E ++ + + D + + Sbjct: 225 AMELWER-----FKDISLKEFQRI----YKMLGIHFDAFVGESFYN----TMVEDTVSGI 271 Query: 281 ARQGYVY---EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337 ++G + ++ ++ C L R K DG+ Y D Sbjct: 272 KKKGLACISEQALIVNLEAYNMPPC-------LLR-------------KKDGTTLYATRD 311 Query: 338 LA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394 +A Y K Y+ F+ MIYV+GS+ + ++ V + A V + + +++ Sbjct: 312 IAAAEYRKSVYD--FEKMIYVVGSEQKLHFCQIFKVLELMGYDWASQCVHVDFGLMKFKE 369 Query: 395 GMPIKMSKRAGDFITL-----------RHVVDE--------------VGSDSVRFMMLWR 429 G KMS R G I L + +++E VG +V F L Sbjct: 370 G---KMSTRKGRVILLEDLLIEAVDRIKRIIEEKNPLLKDKEMVARDVGIGAVIFADLST 426 Query: 430 KNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQ 487 K ++ + FD+ V + + P YVQY +AR SI R+ KD+ D+D+ L + Sbjct: 427 KRNKDVIFDWDTVLNFEGETGP--YVQYTHARLCSILRKYGKDVTTDIDYPLLNED---- 480 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 + LI +L +YP V+ A EP ++ YL D+ + + ++ R Sbjct: 481 ------DAIHLIKNLWQYPFVVLKAAQFYEPSLVSNYLIDICAGVNKFYNAHR------- 527 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V + + LT R+ LV A II +GL I+G+++P EM Sbjct: 528 VLSEDEGLTKARILLVDAARQIIKNGLKILGMQAPVEM 565 >gi|121635178|ref|YP_975423.1| arginyl-tRNA synthetase [Neisseria meningitidis FAM18] gi|166232814|sp|A1KUU4|SYR_NEIMF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|120866884|emb|CAM10643.1| arginyl-tRNA synthetase [Neisseria meningitidis FAM18] gi|254673245|emb|CBA08256.1| Arginyl-tRNA synthetase [Neisseria meningitidis alpha275] Length = 572 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 124/585 (21%), Positives = 239/585 (40%), Gaps = 78/585 (13%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P +L + + + ++ +G K V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRPEFLAQNIQT-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ F G V R+ ++ D G Q L + + + +DL + Y Sbjct: 144 RVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203 Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 AD + L +E L + K D S+ + D L ++ + E ++ Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 ++ ++D+L ++G E +K + K+ G+ + K Sbjct: 262 ----DDLQAVVDDLVQKGLAVE----DDGAKVVFLDEFKNKE--------GEPAAFIVQK 305 Query: 327 SDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383 G + Y + DLA +Y G D ++YV+ + + ++L + + Sbjct: 306 QGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGA 363 Query: 384 LLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416 + +DG P K R+GD + L ++ E Sbjct: 364 AFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGK 421 Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 VG +V++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 422 TVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG------ 474 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 ++D V+ + E QL L ++ V+++ P+ LA YLY +A++F Sbjct: 475 EWDADAPTVLTE-----PLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQIATLFSRF 529 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + P L+ A+ RLQL + GL+++G++ Sbjct: 530 Y---EACPILKAEGASRNS----RLQLAKLTGDTLKQGLDLLGID 567 >gi|271500744|ref|YP_003333769.1| arginyl-tRNA synthetase [Dickeya dadantii Ech586] gi|270344299|gb|ACZ77064.1| arginyl-tRNA synthetase [Dickeya dadantii Ech586] Length = 576 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 136/597 (22%), Positives = 235/597 (39%), Gaps = 111/597 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LG+ P +AE +V +++D IAG GFIN++L +L L Sbjct: 37 GDYQANGIMAAAKKLGMPPRQLAEKVVNTLQLDGIAAKTEIAGPGFINIFLDSQWLSAQL 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 ++ + G + + T V +++ + N MHVG+ R ++GD + F G+ V Sbjct: 97 EH-ALAAPKLGVSPVEPQTIV-VDYSAPNVAKEMHVGNLRSTIIGDAAVRTLEFLGHHVI 154 Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204 R ++ D G Q L L F+R + Y++D E G Sbjct: 155 RANHVGDWGTQFGMLIAHLEDVQNDSTQDLELADLEAFYREAKKQYDDDEVFAE-RARGY 213 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 +K G D+Y + W +V VQ R + +++ + + E Sbjct: 214 VVKLQG---GDEYCRSM-------WRKLVDITMVQNQRSYDRLN---VSLTPENVMGESL 260 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 ++ P DI+ +L +G E S+ +D + G+ + + Sbjct: 261 YNAMLP----DIVADLKAKGLAEE-------SEGAIVVYLDEYK-----NKEGEPMGVII 304 Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSE 376 K DG Y Y D+A K +YE+ G + ++Y + S + V++ V +VS Sbjct: 305 QKKDGGYLYTTTDIACAKYRYEKLGANRVLYYIDSRQHQHLMQAWSIVRKAGYVPESVSL 364 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL-- 434 + ++L +DG P K RAG I L ++DE + ++ KN E+ Sbjct: 365 EHHMFGMMLG------KDGKPFK--TRAGGTIKLSELLDEAYERA--LTLIAGKNPEMER 414 Query: 435 ---------LDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRSIFRQA 468 + K + SK N Y+QYAY R SIF++A Sbjct: 415 TELEQLAQVVSIGAVKYADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVSSIFKRA 474 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 L + V+ E E L L ++ + P+ + YLYDL Sbjct: 475 GVEESSLTQPI----VLTAE-----HEQALATRLLQFEETVTTVARDGTPHVMCAYLYDL 525 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A +F G + + + A+N RL+L A + +GL+ +G+++ +M Sbjct: 526 AGLFSGFYEN------CPILNADNDSTRQSRLKLALLTAKTLKTGLDTLGIQTVEKM 576 >gi|315634078|ref|ZP_07889367.1| arginine--tRNA ligase [Aggregatibacter segnis ATCC 33393] gi|315477328|gb|EFU68071.1| arginine--tRNA ligase [Aggregatibacter segnis ATCC 33393] Length = 577 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 135/597 (22%), Positives = 237/597 (39%), Gaps = 110/597 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LGL+P A+ ++ + ++ + IAG GFIN++L ++L + Sbjct: 37 GDYQANGIMPAAKKLGLNPREFAQSVLDKAELQDIAEKTEIAGPGFINIFLKDTWLADNI 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 S V + G + K T V +++ S N MHVGH R ++GD + + F G V Sbjct: 97 SR-AVQDPKLGVHNPEKQTVV-VDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNNVI 154 Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204 R ++ D G Q L L F+R + Y+ D E V Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHASEMELSDLEAFYRAAKKHYDEDPVFAEKARNYV 214 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 V + D+Y + W +VK M+ + + LN+ +D Sbjct: 215 ----VKLQSGDEYCRTM-------WQKLVK-----ITMQQNQHNYDRLNV---TLTDKDV 255 Query: 265 FHRGDPSP-IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 +P + I+++L +QG E G L + K GD + Sbjct: 256 MGESLYNPMLPGIVEDLKKQGLAVEDDGALVVYLDEFKNKD--------------GDPMG 301 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG-SDHSGYVKRLEAVAAAVSEKKAQ 380 + K DG + Y D+A K +YE N V + S ++++ A ++ K Sbjct: 302 VIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQ----AWLITRKAGY 357 Query: 381 I-NVLLCEL----VRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416 + + E + L +DG P K R+GD + L ++DE Sbjct: 358 VPDSFQLEHKNFGMMLGKDGKPFKT--RSGDTVKLADLLDEAIERAGVLISQKSTALSEQ 415 Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG SV++ L + + FD+ + + N Y+QYAY R RSIF ++ Sbjct: 416 EKADVIEAVGIGSVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNRS 474 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 + +++ S D E L + L ++ ++ P+ L YLY+L Sbjct: 475 QIALSEVEQATL--------SITDEKERALAIKLLQFEEAVQVVGKEGTPHVLCAYLYEL 526 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A VF + H + ++ ++ + RL+L + GL+++G+++ +M Sbjct: 527 AGVFSSFYEH------CPILNNDDHQVKLSRLKLALLTERTLKQGLDLLGIKTVEKM 577 >gi|310658453|ref|YP_003936174.1| arginyl-tRNA synthetase 2 [Clostridium sticklandii DSM 519] gi|308825231|emb|CBH21269.1| Arginyl-tRNA synthetase 2 (Arginine--tRNA ligase 2) (ArgRS 2) [Clostridium sticklandii] Length = 566 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 144/620 (23%), Positives = 260/620 (41%), Gaps = 106/620 (17%) Query: 18 IDCKIKVEKKILDRI----------VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 +D K++V K + ++I +IE P + A G + L++ P IA+ Sbjct: 1 MDFKVEVSKILSEKISDFSYEEILSMIEIPPNAAMGDFAF-PCFKLAKTYRKSPNIIAQE 59 Query: 68 IVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIE 126 + + + S+ AG G++N Y+ L +++ ++ ++G+ IG G V +E Sbjct: 60 LAQELNRPSYLKSIENAG-GYVNFYVDTILLSSQVIKEVLEKKEDFGKMDIGSGKNVIVE 118 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRY 185 F S N P H+GH R V+G++L L F GY ++ D G Q L ++ W Sbjct: 119 FSSPNIAKPFHIGHIRTTVIGNSLYKLYKFLGYNTIGINHLGDYGTQFGKLIVAYKGWGN 178 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA--MMK 243 ++ + N P +Y+++ K A+ + +W ++D +A + K Sbjct: 179 EEEVKN----APIKTLLKLYIEYHEKAEANPQMED----EAREWFKKLEDGDEEATRLWK 230 Query: 244 IIRD-DLKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 R+ L+ + +D+ D + G+ + +I+ + +G + E S+ Sbjct: 231 FFREVSLEEFSRVYDMLGISFDSYAGESFYSDKMPAVIELMEEKGVLIE-------SQGA 283 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIY 354 D++ + P L K DGS Y DLA Y K Y+ F IY Sbjct: 284 HIVDLEPYGM------------PPALIKKRDGSTLYITRDLAAAIYRKKTYD--FYKNIY 329 Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI-KMSKRAGDFITLRHV 413 V+GS + + K+ + + + A CE V+ G+ +S R G + L V Sbjct: 330 VVGSQQALHFKQWMKILDLMGFEWAND----CEHVQFGMVGLEEGTLSTRKGRVVFLEDV 385 Query: 414 VD-------------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 ++ ++G +V F L NS + D+ F + S E Sbjct: 386 LNQAIQKTKEVIIEKNPNLEDIDKVAKQIGVGAVVFQEL--SNSRIKDYTFSWERTLSFE 443 Query: 449 NPVF-YVQYAYARCRSIFRQAKDIFP--DLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 YVQY +AR S+ R+A ++ P ++DF + N +++I L + Sbjct: 444 GETGPYVQYTHARACSVLRKA-NLKPSSEIDFSMLGNN---------NDAMEVIRVLGSF 493 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 V+ A EP+ + Y+ DLA F+ + +NP L ++ K+ RL +V A Sbjct: 494 KSVLLRAADKNEPHHITRYILDLAQAFNKFY---HDNPIL----VDDEKVKAARLAIVEA 546 Query: 566 VASIINSGLNIIGVESPNEM 585 V + + L ++G+E+P M Sbjct: 547 VRIGLENSLKLLGMEAPERM 566 >gi|15835354|ref|NP_297113.1| arginyl-tRNA synthetase [Chlamydia muridarum Nigg] gi|270285526|ref|ZP_06194920.1| arginyl-tRNA synthetase [Chlamydia muridarum Nigg] gi|270289537|ref|ZP_06195839.1| arginyl-tRNA synthetase [Chlamydia muridarum Weiss] gi|301336923|ref|ZP_07225125.1| arginyl-tRNA synthetase [Chlamydia muridarum MopnTet14] gi|13878798|sp|Q9PJT8|SYR_CHLMU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|7190768|gb|AAF39548.1| arginyl-tRNA synthetase [Chlamydia muridarum Nigg] Length = 563 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 147/587 (25%), Positives = 232/587 (39%), Gaps = 106/587 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR--- 99 GH N AM L+R L P IAE IVA I P S+ IAG GFIN S +L Sbjct: 39 GHYQCNDAMKLARALRKSPRAIAEEIVAHIPATP-FSSIEIAGAGFINFTFSKEFLANQL 97 Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 +I S + G + KV I+F S N MHVGH R ++GD LA +F G+ Sbjct: 98 QIFSQELAKGFP-----VSSPQKVIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGH 152 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 +V R +I D G A + Y Q D H + L + Y Sbjct: 153 DVLRLNHIGDWGT-----AFGMLITYLQETAQTDI-------------HQLENLTELYKK 194 Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDIID 278 + F E+ Y+V A+ D +AL + I +SE F + I I+D Sbjct: 195 AHVRFAEDPEFKKRSQYNVVALQS---GDPQALALWKQICAVSEKSFQK-----IYSILD 246 Query: 279 -NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS----TMVGDDVDRPLL--KSDGSY 331 L +G E P + D++ K L+ S + ++ PL+ KSDG Y Sbjct: 247 VELHTRG---ESFYNPFLADVVS--DLESKNLVTLSDGAKCVFHEEFSIPLMIQKSDGGY 301 Query: 332 TYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEA--VAAAVSEKKAQINVLLCEL 388 Y D+A + + ++ D ++ V S S + + LEA +AA K + + L Sbjct: 302 NYATTDVAAMRYRIQQDHADRILIVTDSGQSLHFQLLEATCLAAGYLPHKGIFSHVGFGL 361 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDS 421 V D K R+G+ I L+ ++D +G ++ Sbjct: 362 V---LDTQGRKFKTRSGENIKLQELLDTAIEKAKESLREHRPEISEEELAYQGPILGINA 418 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 +++ L F F K+ + + N + YAY R + I R+ K Sbjct: 419 IKYADLSAHRINDYVFSFEKML-RFEGNTAMSLLYAYVRIQGIKRRMK------------ 465 Query: 482 RNVIPQE---SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + +PQ+ S + +E L + L +P V++ P+ L YLY L + F Sbjct: 466 LDTLPQKGPLSIHEPAEETLALTLLRFPEVLDLTLRELCPHFLTDYLYVLTNKF------ 519 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N R RL L + +G++++G+++ + + Sbjct: 520 ---NAFFRDCHIEGSDYQQERLYLCGLTEKTLETGMHLLGLKTLDHL 563 >gi|116512983|ref|YP_811890.1| arginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11] gi|123025141|sp|Q02W95|SYR_LACLS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|116108637|gb|ABJ73777.1| arginyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11] Length = 564 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 140/592 (23%), Positives = 249/592 (42%), Gaps = 93/592 (15%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IE+P+ G L+ A L++ L P IA I KID IA ++N + Sbjct: 27 IIEKPKSSDLGDLAF-PAFQLAKTLRKSPQIIAGEIAE--KIDTKGFEKVIAVGPYVNFF 83 Query: 93 LSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + +++ ++ G YG IG+G V I+ + N P +GH R V+GD++A Sbjct: 84 LDKNATASEVIREVLTEGEHYGDANIGEGGNVPIDMSAPNIAKPFSIGHLRSTVIGDSIA 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGVYLKHV 209 + GY+ + ++ D G Q L ++ + +Y + + N D Y + + Sbjct: 144 KIYEKLGYQPIKINHLGDWGKQFGLL-ITAYKKYGDEATITANPIDELLKLYVKINAEAK 202 Query: 210 GKELADKYSSEL---LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 D+ + + +E+ L I K +S ++++ R K L + D F+ E + Sbjct: 203 EDPEVDEEGRQWFLKMEQGDEEALRIWKWFSDVSLIEFNRIYGK-LGVTFDHFMGESFY- 260 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL- 325 + I+++L + ++E SK D+++ L P L Sbjct: 261 ---SDKMDAIVEDLENKNLLHE-------SKGALIVDLEKYNL------------NPALI 298 Query: 326 -KSDGSYTYFAADL---AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--AAAVSEKKA 379 K+DG+ Y DL AY K + F +YV+G + + + K+L+AV A Sbjct: 299 KKTDGATLYITRDLATAAYRKKTF--NFVKSLYVVGGEQTNHFKQLKAVLKEAGYDWSDD 356 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 ++V + + + K S R G + L +DE Sbjct: 357 MVHVPFGMVTQGGK-----KFSTRKGHVVKLEMALDEAVDRAEKQIEAKNPNLENKEEVA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +V+F L + DFD + V + + P YVQYA+AR +SI R+A Sbjct: 412 KQVGVGAVKFYDLKTDRNNGYDFDLDEMVSFEGETGP--YVQYAHARIQSILRKAN---R 466 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 ++ D V D +++ L E+P +++ A EP +A Y LA F+ Sbjct: 467 KVNIDNISLVV------SDAEAWEIVKALKEFPNIVKRAADNYEPSIIAKYAISLAQAFN 520 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R + ++ +L RL L+ A + ++ L ++GV +P M Sbjct: 521 KYYAHVR-------ILEDDAQLD-GRLALISATSIVLKEALRLLGVAAPENM 564 >gi|257469475|ref|ZP_05633567.1| arginyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185] gi|317063719|ref|ZP_07928204.1| arginyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185] gi|313689395|gb|EFS26230.1| arginyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185] Length = 570 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 126/590 (21%), Positives = 244/590 (41%), Gaps = 105/590 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G TN AM+ S+ +G +P IA+ ++ ++ + ++ + IAG GFIN++L YL ++L Sbjct: 39 GDFQTNFAMMNSKIIGKNPRVIAQEVLDNLEENNVIEKLEIAGPGFINIFLKSEYLGELL 98 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 EY + + + V I++ S N MH+GH R ++GD++ + + GY + Sbjct: 99 KKSRTE--EYDFSFLNREGDVIIDYSSPNIAKRMHIGHLRSTIIGDSIRRIYKYLGYHIV 156 Query: 163 REYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYY------------PGVYLKHV 209 + +I D G Q L + W ++A N + E Y + Sbjct: 157 ADNHIGDWGTQFGKLIIGYRRWLNKEAYKENPIEELERVYVEFSKLSETEPELEEEARLE 216 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 K+L D + NF W +K S+ K+ K L + D + E +H Sbjct: 217 LKKLQD---GDAENFA--LWKEFIK-VSLDEYDKL----YKRLGVHFDTYYGESFYH--- 263 Query: 270 PSPI-RDIIDNLARQGYVYE----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 PI + +++ L + E ++ P+ C + +K Sbjct: 264 --PIMQGVVEELVEKKLAVEDDGAKVVFFPEEDNLFPCIVQKK----------------- 304 Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383 DG++ Y +D+A K + E + +IY+ + K+ + + + ++ Sbjct: 305 ---DGAFLYSTSDIATIKFRRETYNINKLIYLTDERQQDHFKQFFRITDMLGWNVEKHHI 361 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443 + + DG+ S R G+ I L ++DE + + ++ KN L + + K+ Sbjct: 362 WFG--IMRFADGV---FSTRKGNVIRLEQLLDEGKKRA--YEIVQEKNPSLSEEEKDKIA 414 Query: 444 E-------------QSKENPVF---------------YVQYAYARCRSIFRQAKDIFPDL 475 E Q++++P+ Y+QY+YAR +SI R+A+ ++ Sbjct: 415 EIVGVGAIKYADLSQNRQSPIIFEWDKILTFEGNTAPYLQYSYARIQSILRKAESEGKNV 474 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 D+ I E D E L H+ +P + A+ +P +A YL++L+ F+ Sbjct: 475 DYS----KEIKIE---DKLERALADHITAFPMAVLKASETFKPNIIADYLFELSKKFNSF 527 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ P L ++ R + I GL+++G+++ + M Sbjct: 528 YNSC---PILN----QEDEILYSRALIAKITGETIKDGLSLLGIKTLDRM 570 >gi|161870367|ref|YP_001599537.1| arginyl-tRNA synthetase [Neisseria meningitidis 053442] gi|161595920|gb|ABX73580.1| arginyl-tRNA synthetase [Neisseria meningitidis 053442] Length = 581 Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 124/588 (21%), Positives = 239/588 (40%), Gaps = 84/588 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 34 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 93 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P +L + + + ++ +G K V I++ S N MHVGH R +++GD+++ Sbjct: 94 RLRPEFLAQNIQT-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 152 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ F G V R+ ++ D G Q L + + + +DL + Y Sbjct: 153 RVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 212 Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 AD + L +E L + K D S+ + D L ++ + E ++ Sbjct: 213 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 270 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323 ++ ++D+L ++G E D +++F G+ Sbjct: 271 ----DDLQAVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 311 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 + K G + Y + DLA +Y G D ++YV+ + + ++L + Sbjct: 312 VQKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPEN 369 Query: 381 INVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 + + +DG P K R+GD + L ++ E Sbjct: 370 VGAAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAK 427 Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 VG +V++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 428 IGKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG--- 483 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 ++D V+ + E QL L ++ V+++ P+ LA YLY +A++F Sbjct: 484 ---EWDANAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLF 535 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + P L+ A+ RLQL + GL+++G++ Sbjct: 536 SRFY---EACPILKAEGASRNS----RLQLAKLTGDTLKQGLDLLGID 576 >gi|251789870|ref|YP_003004591.1| arginyl-tRNA synthetase [Dickeya zeae Ech1591] gi|247538491|gb|ACT07112.1| arginyl-tRNA synthetase [Dickeya zeae Ech1591] Length = 576 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 138/605 (22%), Positives = 234/605 (38%), Gaps = 127/605 (20%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LG+ P +AE +V +++D IAG GFIN++L +L L Sbjct: 37 GDYQANGIMAAAKKLGMSPRQLAEKVVQTLQLDGIAAKTEIAGPGFINIFLDSHWLSAQL 96 Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 + + GI L + + +++ + N MHVG+ R ++GD + F G+ Sbjct: 97 EHALAAPNLGI-----LPVEPQTIVVDYSAPNVAKEMHVGNLRSTIIGDAAVRTLEFLGH 151 Query: 160 EVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPE--- 198 V R ++ D G Q L L F+R + Y+ D+ E Sbjct: 152 RVIRANHVGDWGTQFGMLIAHLEDVQNGSASDLELADLEAFYREAKKQYDEDAAFAERAR 211 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 GY V + D+Y + W +V VQ R + +++ + Sbjct: 212 GYV-------VKLQSGDEYCRSM-------WRKLVDITMVQNQRSYDRLN---VSLTPND 254 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + E ++ P +I+ +L +G E S+ +D + G+ Sbjct: 255 VMGESLYNAMLP----EIVADLKAKGLAEE-------SEGAIVVYLDEYK-----NKEGE 298 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370 + + K DG Y Y D+A K +YE+ G D ++Y + S + V++ V Sbjct: 299 AMGVIVQKKDGGYLYTTTDIACAKYRYEKLGADRVLYYIDSRQHQHLMQAWSIVRKAGYV 358 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430 +VS + ++L +DG P K RAG I L ++DE + ++ K Sbjct: 359 PESVSLEHHMFGMMLG------KDGKPFK--TRAGGTIKLSELLDEAYERA--LALIAGK 408 Query: 431 NSEL-----------LDFDFCKVKEQSKE-----------------NPVFYVQYAYARCR 462 N E+ + K + SK N Y+QYAY R Sbjct: 409 NPEMDRTELEQLAQVVSIGAVKYADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVS 468 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ-LIVHLAEYPRVIENATIAQEPYKL 521 SIF++A + + Q Q L L ++ + P+ + Sbjct: 469 SIFKRAG----------VEESSLTQPIALTAEHEQALATRLLQFEETVTTVARDGTPHVM 518 Query: 522 AFYLYDLASVFHGHWSHGREN-PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 YLYDLA +F G + EN P L N R+ RL+L A + +GL+ +G++ Sbjct: 519 CAYLYDLAGLFSGFY----ENCPILNADSENTRQ---SRLKLARLTAKTLKTGLDTLGIQ 571 Query: 581 SPNEM 585 + +M Sbjct: 572 TVEKM 576 >gi|325128541|gb|EGC51414.1| arginyl-tRNA synthetase [Neisseria meningitidis N1568] Length = 572 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 124/588 (21%), Positives = 239/588 (40%), Gaps = 84/588 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG+ N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQPTKNAEHGNFQINGVMGTAKKAKQNPRELAQKVAEALAGNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P +L + + + ++ +G K V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRPEFLAQNIQT-ALNDARFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 + F G V R+ ++ D G Q L + + + +DL + Y Sbjct: 144 RVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203 Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 AD + L +E L + K D S+ + D L ++ + E ++ Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323 ++ ++D+L ++G E D +++F G+ Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 + K G + Y + DLA +Y G D ++YV+ + + ++L + Sbjct: 303 VQKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPES 360 Query: 381 INVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 + + +DG P K R+GD + L ++ E Sbjct: 361 VGAAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAK 418 Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 VG S+++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 419 IGKTVGIGSIKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG--- 474 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 ++D V+ + E QL L ++ V+++ P+ LA YLY +A++F Sbjct: 475 ---EWDANAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLF 526 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + P L+ A+ RLQL + GL+++G++ Sbjct: 527 SRFY---EACPILKAEGASRNS----RLQLAKLTGDTLKQGLDLLGID 567 >gi|255714653|ref|XP_002553608.1| KLTH0E02816p [Lachancea thermotolerans] gi|238934990|emb|CAR23171.1| KLTH0E02816p [Lachancea thermotolerans] Length = 645 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 122/511 (23%), Positives = 201/511 (39%), Gaps = 96/511 (18%) Query: 84 AGKGFINLYLSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 A F+ + P +L K+ L I+ EYG + + KV IEF S N P H GH R Sbjct: 143 ANGPFVQFFFKPDFLFKVVLPDILTRKEEYGSAPLVQNKKVVIEFSSPNIAKPFHAGHLR 202 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS--------------------VF 182 ++G L++L G++V R Y+ D G Q LA+ V+ Sbjct: 203 STIIGGFLSNLYEKMGWDVVRLNYLGDWGKQFGVLAVGFERYGDEEALSKDPIKHLYDVY 262 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 R Q + LPE + K++ D +E L I K + ++ Sbjct: 263 VRVNQDITAEGDSLPEDKSTDGQARAYFKKMEDG---------DENALKIWKRFRELSIE 313 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 K I D LNI++D + E R ++ +D +G +E Sbjct: 314 KYI-DTYARLNIKYDSYSGESQASR---ESMQLALDMFREKGLTHE-------------- 355 Query: 303 DMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360 DR LL T + + ++ KSDG+ Y D+ ++++ FD MIYV+ Sbjct: 356 --DRGALLIDLTKFNKKLGKTIVQKSDGTTLYMTRDVGTAMDRHKKYNFDKMIYVIACQQ 413 Query: 361 S---------------GYVKRLEAV----AAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401 G+ K L+ V +S +K + V L ++ ++ M M Sbjct: 414 DLYTAQLFEVLKQLGFGWAKDLQHVNFGMVQGMSTRKGTV-VFLDNILEETKEKMHEVMK 472 Query: 402 KRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYA 457 + + + V D VG +V + K +F + ++ + P Y+QYA Sbjct: 473 TNKAKYAQIENPDEVADLVGISAVMIQDMQAKRINNYEFKWERMTSFEGDTGP--YLQYA 530 Query: 458 YARCRSIFRQAKDI----FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513 ++R RS+ R A +I + DF L + + + L+ LA+YP V+ NA Sbjct: 531 HSRLRSVERNASEITQEKMVNADFSLL----------HEPAAVLLVRLLAQYPDVLRNAI 580 Query: 514 IAQEPYKLAFYLYDL----ASVFHGHWSHGR 540 EP + YL+ L +S + W G+ Sbjct: 581 KTHEPATVVTYLFKLTHQVSSCYDVLWVAGQ 611 >gi|71892230|ref|YP_277963.1| arginyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|109894973|sp|Q492L0|SYR_BLOPB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|71796336|gb|AAZ41087.1| arginyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 581 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 137/606 (22%), Positives = 252/606 (41%), Gaps = 103/606 (16%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +++ G+ N + +S+ L + A+ + I ++ ++ I GFIN+ Sbjct: 27 IQVQQSTKRKFGNYQINGLIAISKKLNIPIEEFAKKFIQFINLNDVAHTIKIEKPGFINI 86 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +L+ ++ +++I S G T V I++ N MHVGH R V+GD++A Sbjct: 87 FLNTKWISNQINNIF-SASHLGITPATPKTIV-IDYSGPNVAKEMHVGHLRSTVIGDSIA 144 Query: 152 SLMAFSGYEVTREYYINDAGAQINTL---------------------ALSVFWRYQQALY 190 +++F G+ V R +I D G Q L L F+R + Y Sbjct: 145 RVLSFLGHNVIRANHIGDWGTQFGMLIAYIEKNAQTRFLLNKTIQLSTLEHFYREAKKKY 204 Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250 + D D E Y+ + K DK+ ++ + + + I+ + + + I Sbjct: 205 DIDPDFAE--LSRNYVLKLQK--GDKHYRQIWKYLVD--ISILNNQDIYVRLNI------ 252 Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310 N++ I E ++ P DI+ +L +G + T + +L Sbjct: 253 --NLKKSDIIGESFYNDMLP----DIVSDLKNKG-----LAVTSNGATVVFLENYHNKL- 300 Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRLE 368 G + K DG+Y Y D+A ++CK D +IY + S ++ + Sbjct: 301 ------GTPFGVIIQKKDGAYLYSTTDIACIKYRCKVLHA-DRIIYYIDSRQKQHLIQAW 353 Query: 369 AVA--AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 +A A EK + +C ++ L +DG P K RAG+ + L+ ++DE + R ++ Sbjct: 354 EIADKAGYIEKSVLLEHHMCGML-LGKDGKPFKT--RAGNALKLKTLLDE-ALERARCLI 409 Query: 427 LWR----------KNSELLDFDFCKVKEQSKE-----------------NPVFYVQYAYA 459 L + K + ++ K E SK N YVQYA Sbjct: 410 LSKNPNLKYTEINKLAHIISIGAIKYSELSKNRITDYIFDWNNMLNFEGNTAPYVQYACT 469 Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 R +IF+++K P+ +N I E+E E+ L + L ++ +I + P+ Sbjct: 470 RIFAIFKRSKQ--PNFQL---KKNDIQLETE---EEILLAICLLQFEEMIVAVSNQGAPH 521 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 L YLY L+ +F + EN + ++A+N + RL+L + +GLN++G+ Sbjct: 522 ILCSYLYKLSVLFSSFY----ENCPI--IKAHNTHIKYSRLKLALITMRTLKTGLNLLGI 575 Query: 580 ESPNEM 585 ++ M Sbjct: 576 KTVRYM 581 >gi|289641668|ref|ZP_06473828.1| arginyl-tRNA synthetase [Frankia symbiont of Datisca glomerata] gi|289508537|gb|EFD29476.1| arginyl-tRNA synthetase [Frankia symbiont of Datisca glomerata] Length = 592 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 142/586 (24%), Positives = 244/586 (41%), Gaps = 96/586 (16%) Query: 47 TNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIV 106 +AA+ L+R L +P IA +V ++D ++V +AG GFINL+L+ S L ++L + Sbjct: 56 ADAALSLARRLRRNPRDIAAEVVRAAELDDLCETVEVAGPGFINLHLAASALERLLGEV- 114 Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGP-----MHVGHCRCAVVGDTLASLMAFSGYEV 161 +G +G E V + +GP MHVGH R ++GD L+++ G++V Sbjct: 115 -----FGDERLGVAPVPEPEVVVVDYSGPNAAKEMHVGHLRSTIIGDAAVRLLSWLGHQV 169 Query: 162 TREYYINDAGAQINTLA--LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 R+ +I D G L L + A + DL +Y +K E Sbjct: 170 VRQNHIGDWGTPFGMLVEHLLDIGESEAAHELSVGDL-NAFYRAARVKFDADE------- 221 Query: 220 ELLNFPEEKWLPIVK----DYSVQAMMKIIRDDLK----ALNIQHDIFISEDDFHRGDPS 271 F E L +V+ D + + + ++ + K + Q + ++E DF RG+ S Sbjct: 222 ---AFKERSRLRVVRLQAGDPTTRRLWHVLVGESKKYFLTVYSQLGVLLTEADF-RGESS 277 Query: 272 ---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--K 326 + ++D L G + + C F++ DD PL+ K Sbjct: 278 YNDQLGPVVDELTELGLL--------RLSDGALCAFPEG---FKNR---DDEPLPLIVRK 323 Query: 327 SDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI---- 381 DG Y Y DLA + + + ++YV+G + + + VA +A + Sbjct: 324 RDGGYGYATTDLATIRHRIRDLHATRLLYVVGLPQYQHFEMIYEVAREAGWLRAPVRAEH 383 Query: 382 ----NVLLCELVRL-YRDGMPIKM-------SKRAGDFITLR----------HVVDEVGS 419 ++L + L R G +K+ RA D I ++ V +G Sbjct: 384 IGHGSILGADGKMLRTRAGDSVKLVALLEQAVSRAADVIAVKNPGLDAQTRAQVAQAIGI 443 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 +V++ L S+ FD ++ N Y+QYA+AR S+FR+A +P D+ Sbjct: 444 GAVKYADLSTDRSKDYVFDLDRMLAFDG-NTAPYLQYAHARICSVFRRAGLTYPVAAADI 502 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 R P+E L V L + V+E + E ++LA YL+ LA+ F + Sbjct: 503 --RIGEPEER-------HLAVQLLSFGDVVEGIVDSLEFHRLAGYLFSLATAFTNFYE-- 551 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P LR + R+ L + +GL ++G+ +P M Sbjct: 552 -KCPILR----AEEPVRTSRVALCDLTRRALATGLGLLGITAPERM 592 >gi|145297303|ref|YP_001140144.1| arginyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida A449] gi|142850075|gb|ABO88396.1| arginyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida A449] Length = 581 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 138/602 (22%), Positives = 239/602 (39%), Gaps = 96/602 (15%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 R+ ++R ++ AHG L+TN AM+L++P +P +A I+ + + V IAG GFIN Sbjct: 29 RVQVDRCKEKAHGDLATNLAMLLAKPARKNPRELAAAIIENLPASDLIAKVEIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + +L + ++V S + + V +++ + N M V H R V+GD Sbjct: 89 FFFDQRWLAGQVETMVTSANANVK--LPTPQTVVVDYSAPNVAKEMAVHHIRSTVLGDVA 146 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNN 192 A + F G++V R +I D G Q L L F+ + Y+ Sbjct: 147 ARALEFLGHKVVRANHIGDWGTQFGMLIAYLEKMANEHASDMALKDLEAFYTQAKRCYDE 206 Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252 D E V G E +L++ E+ +I D L Sbjct: 207 DEAFAERARNYVVKLQGGDEYCRTMWKKLVDMTMEQ-------------NQINYDRLNVS 253 Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312 DI + E ++ P +I+ +L +G E S+ +D F+ Sbjct: 254 LTNKDI-MGESMYNDMLP----EIVADLKAKGLAVE-------SEGATVVFLDE----FK 297 Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYV------- 364 + G+ + + KSDG + Y D+A K +YE G D ++Y + S ++ Sbjct: 298 NK-DGEPMGVIIQKSDGGFLYTTTDIACAKYRYETLGADRVMYFIDSRQHQHLMQAWTIT 356 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLY--RDGMPIKM-------SKRAGDFITLR---- 411 ++ V +V + ++L + R Y R G +K+ +RA + R Sbjct: 357 RKAGYVPESVPLEHHAFGMMLGKDGRPYKTRSGGTVKLVDLLNEAEERATALLESRNSDL 416 Query: 412 ------HVVDEVGSDSVRFMMLWRKNSE--LLDFDFCKVKEQSKENPVFYVQYAYARCRS 463 +VV+ + +V++ L + + + D+D E N Y+QYAY R +S Sbjct: 417 SAEEKANVVNAIAMGAVKYADLSKNRTTDYIFDWDMMLSFEG---NTAPYLQYAYTRIQS 473 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 IFR+A ++D NV E +E L L ++ + P+ L Sbjct: 474 IFRKA-----NIDASTLIGNVTLNEE----AEEVLAQKLIQFSDAVNGVADKGMPHLLCT 524 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 YLY+L+ F + N + RL L A A ++ GL ++G+ + Sbjct: 525 YLYELSGNFMTFYEACPINK-----DGVDEATRQSRLLLCTATAKVLKLGLGVLGIHTLE 579 Query: 584 EM 585 M Sbjct: 580 RM 581 >gi|156937719|ref|YP_001435515.1| arginyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I] gi|166232795|sp|A8AB06|SYR_IGNH4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|156566703|gb|ABU82108.1| arginyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I] Length = 622 Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 140/569 (24%), Positives = 243/569 (42%), Gaps = 103/569 (18%) Query: 87 GFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 GF+N+ L PS+L + L S +YG+ ++ +E SANP P+HVGH R Sbjct: 87 GFLNVELEPSWLAERALRE--ASREDYGKWSFS--GRLVVEHTSANPVHPLHVGHARNMF 142 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205 +GD+L ++ G +V +YIND G Q+ L + L + + P+ +Y VY Sbjct: 143 LGDSLVRILKNWGADVQSRFYINDMGRQVAVLVYGLL--KLGRLEPPEGEKPDHWYGKVY 200 Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH-DIFISE-- 262 V L + S + +++W ++K+ + +I+R+ + + + + +SE Sbjct: 201 --SVANALVELNSPSKGDDEKKEWEEVLKELESK-WPEIVREMKEKFDDEDPEAKVSELM 257 Query: 263 DDFHRGDP---SPIRDII--------DNLARQG-----------YVYEGILPPPKSKTTQ 300 + GDP R ++ + + R G V+ G + + + Sbjct: 258 KKYEEGDPEVKETFRKVVNEVLKGFKETMERVGVNVDKWDWESDLVWSGEVDKIINMAKE 317 Query: 301 KCDMDRKQ----LLFRSTMVGDDVDR-----------PLL--KSDGSYTYFAADLAYFKC 343 K + K ++F++ + D+V R PL+ +SDG+ Y D+AY Sbjct: 318 KGLVIEKDGALVMVFKN--LNDEVRRRLRIPKGLQIPPLVLKRSDGTTLYTTRDIAYTIK 375 Query: 344 KYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402 K+E D +I V+ ++ +L + K+ N++ + GM KMS Sbjct: 376 KFEEFRADRVINVIAAEQRLPQIQLRLALWELGFKEYAENLIHYAYEMVNVPGM--KMSG 433 Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD------------FDFCKVKEQS---- 446 R G ITL ++DE VR ++ R +E +D F V + Sbjct: 434 RRGRMITLDWLLDE-AERRVRELVEGRSEAEDVDEVVKKVAVGAVKFAMVSVSPEKPITF 492 Query: 447 --------KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE--L 496 + N Y+QY YAR I R+ + PDL + +++ +E Sbjct: 493 KWEEVLNFERNSAPYLQYTYARAVGILRKGGE--PDL-----------ERADYSKAEKYK 539 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +I+ +AE+P V A +P +A YL LA F+ + + P + + L Sbjct: 540 DMILSIAEFPEVARKAAEDLKPDLIATYLLSLADKFNEFY---HKEP---VAKEPDEGLR 593 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++L LV AVA+ I GL ++GVE+P M Sbjct: 594 NLKLALVKAVANTIRRGLWLLGVEAPARM 622 >gi|254805273|ref|YP_003083494.1| Arginyl-tRNA synthetase [Neisseria meningitidis alpha14] gi|254668815|emb|CBA06810.1| Arginyl-tRNA synthetase [Neisseria meningitidis alpha14] Length = 572 Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 125/588 (21%), Positives = 238/588 (40%), Gaps = 84/588 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P +L + + + ++ +G K V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRPEFLAQNIHA-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 + F G V R+ ++ D G Q L + + + +DL + Y Sbjct: 144 RVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203 Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 AD + L +E L + K D S+ + D L ++ + E ++ Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323 ++ ++DNL ++G E D +++F G+ Sbjct: 262 ----DDLQPVVDNLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 + K G + Y + DLA +Y G D ++YV+ + + ++L + Sbjct: 303 VQKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPEN 360 Query: 381 INVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 + + +DG P K R+GD + L ++ E Sbjct: 361 VGAAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAK 418 Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 VG +V++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 419 IGKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG--- 474 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 ++D V+ + E QL L ++ V+++ P+ LA YLY +A++F Sbjct: 475 ---EWDANAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLF 526 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + P L+ A+ RLQL + GL+++G++ Sbjct: 527 SRFY---EACPILKAEGASRNS----RLQLAKLTGDTLKQGLDLLGID 567 >gi|269123117|ref|YP_003305694.1| arginyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112] gi|268314443|gb|ACZ00817.1| arginyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112] Length = 572 Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 140/598 (23%), Positives = 236/598 (39%), Gaps = 90/598 (15%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 L + I+ G TN AM ++ LG +P +A +V + V +AG GF Sbjct: 24 LTELDIQNATKKEFGDYQTNFAMQKAKMLGKNPRELANDVVENFDGKGVISKVEVAGPGF 83 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 IN +++ L + I EYG I V I++ S N MH GH R ++GD Sbjct: 84 INFFINTDLLNQETEKIGKENYEYG---ISNEKIVAIDYSSPNIAKRMHAGHLRSTIIGD 140 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLK 207 L + G+ V + +I D G Q L ++ W + A N + E Y V Sbjct: 141 ALKRIYRELGFTVYGDNHIGDWGTQFGKLIVAYNNWLDKDAYEANAIEELERIY--VLFS 198 Query: 208 HVGKE---LADKYSSEL--------LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 KE L +K EL +N+ W + S++ K+ K L+I+ Sbjct: 199 QKAKEDPTLEEKAREELRKVQAGDPVNYA--LWKEFITS-SLREYDKV----YKRLDIEF 251 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 ++F E ++ P +L K K K D + F + + Sbjct: 252 ELFNGESFYNEMMPK------------------VLEKLKEKEIAKQDQGALVVFFPNDEL 293 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKC-KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375 + + K D S+ Y +DLA K E D IYV+ S + K++ +A + Sbjct: 294 PPCI---VQKKDNSFLYSTSDLATIVYRKDELNVDIAIYVVDERQSDHFKQVFKIAEMLG 350 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL-----------RHVVDE-------- 416 + + DG S R GD I L + +VDE Sbjct: 351 SPYNYDKYHTKFGIMRFGDGTI--FSTRGGDVIRLEDILNKAKERVQEIVDEKNPELSQE 408 Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQ 467 VG ++++ L + + + F + KV + P Y+QY+Y R S+ R+ Sbjct: 409 EREYIAETVGVGAIKYFDLSQNRTSGITFTWDKVLSFEGNTGP--YLQYSYVRIMSMLRK 466 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 AKD+ + + F + D S+ L+V L + P + + + P +A Y+Y Sbjct: 467 AKDLGIEFENSKFLVD------GSDISDRNLVVSLHKLPTAVIKSYESNRPNLIAEYIYS 520 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L F+ ++ + + +N +LT RL L A +I L+++G+ + ++M Sbjct: 521 LTKEFNSFYNAH------QVIDKDNLELTKARLALCEKTALVIKKALSLLGIRTVDKM 572 >gi|304387091|ref|ZP_07369342.1| arginine--tRNA ligase [Neisseria meningitidis ATCC 13091] gi|304338840|gb|EFM04943.1| arginine--tRNA ligase [Neisseria meningitidis ATCC 13091] Length = 572 Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 125/588 (21%), Positives = 237/588 (40%), Gaps = 84/588 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ I + + ++S +AG GFINL Sbjct: 25 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKIADALAGNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P +L + + + ++ +G K V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRPEFLAQNIQT-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 + F G V R+ ++ D G Q L + + + +DL + Y Sbjct: 144 RVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203 Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 AD + L +E L + K D S+ + D L ++ + E ++ Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323 ++ ++D+L ++G E D +++F G+ Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 + K G + Y + DLA +Y G D ++YV+ + + ++L + Sbjct: 303 VQKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPEN 360 Query: 381 INVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 + + +DG P K R+GD + L ++ E Sbjct: 361 VGAAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAK 418 Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 VG S+++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 419 IGKTVGIGSIKYADLSKNRTSDYVFDWDAMLS-FEGNTAPYLQYAYTRVQSVFRKAG--- 474 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 ++D V+ + E QL L ++ V+++ P+ LA YLY +A++F Sbjct: 475 ---EWDANAPTVLTE-----PLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQIATLF 526 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + P L+ A RLQL + GL+++G++ Sbjct: 527 SRFY---EACPILKAEGATRNS----RLQLAKLTGDTLKQGLDLLGID 567 >gi|21221735|ref|NP_627514.1| arginyl-tRNA synthetase [Streptomyces coelicolor A3(2)] gi|7674350|sp|Q9WX29|SYR_STRCO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|5123649|emb|CAB45338.1| putative arginyl-tRNA synthetase [Streptomyces coelicolor A3(2)] Length = 586 Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 129/594 (21%), Positives = 235/594 (39%), Gaps = 107/594 (18%) Query: 48 NAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIV 106 N + L++ +P +A +VARI D ++ V ++G GF+N+ ++ + L++ + Sbjct: 44 NGILALAKKTKANPRELAAEVVARITTGDELIEDVEVSGPGFLNITVADRAITANLAARL 103 Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166 G G L +++ N MHVGH R AV+GD L S++ F+G + ++ Sbjct: 104 ADGERLGVPLKQDAGTTVVDYAQPNVAKEMHVGHLRSAVIGDALRSMLDFTGEKTIGRHH 163 Query: 167 INDAGAQINTLALSVF------------------------WRYQQALYNNDSDLPEGYYP 202 I D G Q L +F ++ +A+++ D + E Sbjct: 164 IGDWGTQFGMLIQYLFEHPGELAPAGDIDGEQAMSNLNRVYKASRAVFDTDEEFKERARR 223 Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262 V V + DK + +L W V + V + D++ I+ + + E Sbjct: 224 RV----VALQSGDKETLDL-------WQQFVDESKVYFYSVFEKLDME---IRDEEIVGE 269 Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322 ++ G P R +++ + EG L + F DD Sbjct: 270 SAYNDGMPETAR-LLEEMG-VAVRSEGALV----------------VFFDEIRGKDDQPV 311 Query: 323 PLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 PL+ K+DG + Y A+DL + + + ++YV+ S + + + A Sbjct: 312 PLIVQKADGGFGYAASDLTAIRNRVQDLHATTLLYVVDVRQSLHFRMVFETARRAGWLGD 371 Query: 380 QINVL-LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 ++ + L DG P K RAG+ + L ++DE Sbjct: 372 EVTAHNMGYGTVLGADGKPFKT--RAGETVRLEDLLDEAVQRAAEVVREKARDLTEDEIQ 429 Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VG +V++ L + FD ++ + + V Y+QYAYAR +SI R+A ++ Sbjct: 430 ERAAQVGIGAVKYADLSTSPNRDYKFDLDQMVSLNGDTSV-YLQYAYARIQSILRKAGEV 488 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 P E +E L +HL + + A P+KLA YLY LAS+ Sbjct: 489 RP----------AAHPELALHEAERALGLHLDAFGPTVFEAAAEYAPHKLAAYLYQLASL 538 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + ++A + RL L A ++ G+ ++G+ +P + Sbjct: 539 YTTFYD------KCPVLKAETPEQVENRLFLCDLTARTLHRGMALLGIRTPERL 586 >gi|315221535|ref|ZP_07863455.1| arginyl-tRNA synthetase [Streptococcus anginosus F0211] gi|315189369|gb|EFU23064.1| arginyl-tRNA synthetase [Streptococcus anginosus F0211] Length = 562 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 145/600 (24%), Positives = 242/600 (40%), Gaps = 110/600 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E+P+ G ++ A L++ P IA I KID +A ++N + Sbjct: 26 LLEKPKSSDLGDIAF-PAFSLAKVERKAPQAIATDIAE--KIDSTNFEKVVATGPYVNFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S + +++ IV G YG+ G G + I+ S N P VGH R V+GD L+ Sbjct: 83 LDKSKISAQVIKEIVKEGNNYGQQNEGNGENITIDLSSPNIAKPFSVGHLRSTVIGDALS 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY + ++ D G Q L ++ W ++A+ N D LK Sbjct: 143 NIFRKLGYNTIKINHLGDWGKQFGLLMVAYKKWGSKEAVEANPID--------ELLKLYV 194 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 + A+ + L+ W ++D +A + + RD+ LK N + + E D Sbjct: 195 RINAEIETDPELDDEGRLWFKKLEDGDPEATELWQWFRDESLKEFNRIYKLLGVEFDSLA 254 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP- 323 G+ + + I L +G + E SK ++D DV+ P Sbjct: 255 GEAFYNDKMDEGIKILEEKGLLEE-------SKGASIVNLD-------------DVNLPP 294 Query: 324 --LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV---- 374 + KSDG+ Y D+A Y Y F IY +G + + + ++L+AV + Sbjct: 295 AMIKKSDGATLYITRDIATAMYRARTY--NFVKNIYAVGQEQANHFRQLKAVLKKMGFDW 352 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 S+ ++ L R K+S R G+ I L + E Sbjct: 353 SDDMIHVDFGLVTKNRQ-------KLSTRKGNIILLEPTLQEAISRAKSQIEAKNPDLEN 405 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG +V+F L DFD V + + P Y+QYAYAR +SI R+A Sbjct: 406 KEAVARAVGVGAVKFYDLKTDRRNGYDFDLEAMVSFEGETGP--YIQYAYARIQSILRKA 463 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 D P + S D ++I L ++ RV++ A +P +A Y L Sbjct: 464 -DFRPSAE---------ATYSLDDAESWEIIKLLQDFARVVKRAADNYDPSLIAKYAISL 513 Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A F+ ++H R E+P RL L +A A ++ L ++G+++P +M Sbjct: 514 AQAFNKFYAHTRILDESPERD-----------SRLALSYATAVVLKESLRLLGIDAPEKM 562 >gi|254670676|emb|CBA06775.1| Arginyl-tRNA synthetase [Neisseria meningitidis alpha153] Length = 572 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 124/588 (21%), Positives = 238/588 (40%), Gaps = 84/588 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEALAGNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P +L + + + ++ +G K V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRPEFLAQNIQT-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 + F G V R+ ++ D G Q L + + + +DL + Y Sbjct: 144 RVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203 Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 AD + L +E L + K D S+ + D L ++ + E ++ Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323 ++ ++D+L ++G E D +++F G+ Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 + K G + Y + DLA +Y G D ++YV+ + + ++L + Sbjct: 303 VQKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPEN 360 Query: 381 INVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 + + +DG P K R+GD + L ++ E Sbjct: 361 VGAAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAK 418 Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 VG S+++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 419 IGKTVGIGSIKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG--- 474 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 ++D V+ + E QL L ++ V+++ P+ LA YLY +A++F Sbjct: 475 ---EWDANAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLF 526 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + P L+ A+ RLQL + GL+++G++ Sbjct: 527 SRFY---EACPILKAEGASRNS----RLQLAKLTGDTLKQGLDLLGID 567 >gi|325130593|gb|EGC53340.1| arginyl-tRNA synthetase [Neisseria meningitidis OX99.30304] Length = 572 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 125/588 (21%), Positives = 238/588 (40%), Gaps = 84/588 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ I + + ++S +AG GFINL Sbjct: 25 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKIADALAGNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P +L + + + ++ +G K V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRPEFLAQNIQT-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 + F G V R+ ++ D G Q L + + + +DL + Y Sbjct: 144 RVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203 Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 AD + L +E L + K D S+ + D L ++ + E ++ Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323 ++ ++D+L ++G E D +++F G+ Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 + K G + Y + DLA +Y G D ++YV+ + + ++L + Sbjct: 303 VQKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPEN 360 Query: 381 INVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 + + +DG P K R+GD + L ++ E Sbjct: 361 VGAAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAK 418 Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 VG S+++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 419 IGKTVGIGSIKYADLSKNRTSDYVFDWDAMLS-FEGNTAPYLQYAYTRVQSVFRKAG--- 474 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 ++D V+ + E QL L ++ V+++ P+ LA YLY +A++F Sbjct: 475 ---EWDANAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLF 526 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + P L+ A+ RLQL + GL+++G++ Sbjct: 527 SRFY---EACPILKAEGASRNS----RLQLAKLTGDTLKQGLDLLGID 567 >gi|56707608|ref|YP_169504.1| arginyl-tRNA synthetase [Francisella tularensis subsp. tularensis SCHU S4] gi|110670079|ref|YP_666636.1| arginyl-tRNA synthetase [Francisella tularensis subsp. tularensis FSC198] gi|224456678|ref|ZP_03665151.1| arginyl-tRNA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|254370125|ref|ZP_04986131.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874428|ref|ZP_05247138.1| arginyl-tRNA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|81597851|sp|Q5NHI8|SYR_FRATT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|123063558|sp|Q14IZ0|SYR_FRAT1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|56604100|emb|CAG45099.1| Arginyl-tRNA synthetase [Francisella tularensis subsp. tularensis SCHU S4] gi|110320412|emb|CAL08482.1| Arginyl-tRNA synthetase [Francisella tularensis subsp. tularensis FSC198] gi|151568369|gb|EDN34023.1| hypothetical protein FTBG_01229 [Francisella tularensis subsp. tularensis FSC033] gi|254840427|gb|EET18863.1| arginyl-tRNA synthetase [Francisella tularensis subsp. tularensis MA00-2987] gi|282158765|gb|ADA78156.1| arginyl-tRNA synthetase [Francisella tularensis subsp. tularensis NE061598] Length = 581 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 138/594 (23%), Positives = 246/594 (41%), Gaps = 101/594 (17%) Query: 44 HLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILS 103 H N AM L++ PL IAE IV I + + +A GFIN+ L+P +L + Sbjct: 37 HFQCNGAMPLAKFAKKPPLAIAEEIVEHIDAEDIFAKLEVAKPGFINITLAPKFLADTTN 96 Query: 104 SIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR 163 + S ++G KV ++F N PMHVGH R A++GD L + F G V Sbjct: 97 RFLNSN-KFGVQNNLPNRKVVLDFGGPNVAKPMHVGHIRSALLGDALQRIHRFCGDTVVS 155 Query: 164 EYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY------ 217 + ++ D G Q+ L + + Q +Y +++ G YP V +ELA+ Y Sbjct: 156 DVHLGDWGTQMGMLIEEIKLQSPQLVYFDEN--YTGEYPTESPVTV-QELAEIYPRASKR 212 Query: 218 SSELLNFPEEKWLPIVK------------DYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 +N E+ L + + V+ + ++ D +L++ D+++ E D Sbjct: 213 CKSDINEMEKARLATFELQQGRRGYVALWQHFVRISIDAVKKDFDSLDVHFDLWLGESDA 272 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL- 324 ++ I ++I ++YE + D ++ D PL Sbjct: 273 NKF----IDEMISYFQANNFIYE-------DEGAWVIDTNK------------DGVPPLI 309 Query: 325 -LKSDGSYTYFAADLA-YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA---AAVSEKKA 379 +K DG Y DLA ++ + D +IYV+ S + K++ +VA VSEK Sbjct: 310 VIKKDGGVMYGTTDLATLWQRSKDLDPDEIIYVVDKRQSLHFKQVFSVAERTKVVSEK-- 367 Query: 380 QINVLLCELVRLY------RDGMPIKMSK-----------RAGDFITLR-------HVVD 415 C+L + +DG P K + +A ++ R +++ Sbjct: 368 ------CKLKHVAFGTVNGKDGRPFKTREGGVMHLADLISQAKEYAKNRMPDENDDSIIN 421 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 ++ +++F L + FD K + + K P Y+ Y R +SI R+ IF D Sbjct: 422 QIAMATIKFGDLINNYANDYFFDLEKFAQHEGKTGP--YLLYTVVRAKSILRK---IFGD 476 Query: 475 -LDFDLFPRN--VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 D ++ V+ +E+ E +L + L ++P ++ A +P+ + Y Y LA+ Sbjct: 477 NYDIKSLAKDYKVVNAHNEY---EEKLQLQLIQFPIAVQRAYENSQPHHICEYAYSLANS 533 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ + + N ++ L R+ L A + ++IG+ P M Sbjct: 534 FNKFYVNCPIN------NLDDESLKKARIALCMATVKAMTIASDLIGISIPERM 581 >gi|189219458|ref|YP_001940099.1| Arginyl-tRNA synthetase [Methylacidiphilum infernorum V4] gi|189186316|gb|ACD83501.1| Arginyl-tRNA synthetase [Methylacidiphilum infernorum V4] Length = 580 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 142/596 (23%), Positives = 249/596 (41%), Gaps = 86/596 (14%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E + A G +N A IL++ L +P +AE + I P + + G GF+N Sbjct: 28 IVEPCTNPAFGDFQSNIAFILAQSLKANPKNLAEELARSIGESPFIFPPEVGGSGFLNFK 87 Query: 93 LSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + P +YL L+ + S G + + I+F S N +HVGH R ++GD L Sbjct: 88 VKPKAYLDTFLA--IRSDPRLGIEQTKQPQTIVIDFSSPNIAKELHVGHLRSTILGDVLR 145 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 L F G+ V + ++ D G Q + L + +Y + + P Y +Y+K + K Sbjct: 146 KLNLFLGHRVITDNHLGDWGTQFGMVILG-YKKYGRP--ELLTQRPLEYLEELYIK-IQK 201 Query: 212 E------LADKYSSELLNF----PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 E + ++ EL PE + L + VQA + + + LN++ D + Sbjct: 202 ESDESTQIREEAKKELQKLQSGDPENRSL---WERFVQASLGELDKIYQRLNVKFDFSLG 258 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYV--YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319 E ++ + I++ L ++G EG + C +F + Sbjct: 259 ESFYN----PMLEGIVEQLLQKGIARYSEGAV----------C-------VFFGKSFPEL 297 Query: 320 VDRPLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA---- 372 D PLL KSDG++ Y D+A +++ G +IYV S + +L A+A Sbjct: 298 EDNPLLIRKSDGAFLYATTDIATLFFRFQNWGAHRIIYVTDSRQKLHFNQLFALAQILAL 357 Query: 373 AVSEKKAQINVLLCELVRLY--RDGMPIKMSK-------RAGDFITLR----------HV 413 V + +L E + R+G P+K+ + RA I + H+ Sbjct: 358 PVRLEHVHFGSILGEDKKPLKTREGTPVKLRELLDEAENRAYQLIDAKRKDLSPEKKQHI 417 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARCRSIFRQAK--D 470 VG ++++ L + + LD+ F K S + N Y+ A+ R RSI ++A Sbjct: 418 ARAVGIGALKYADLSQNRT--LDYVFKWEKLLSFDGNTAPYLINAHVRIRSIMKKASLHG 475 Query: 471 IFPDLDFDLFPRNVIPQESE-FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 + L F + E+E E++L+ L + + A+ P+ L +LY LA Sbjct: 476 YYSTLGF-----TSLKFETEALHPQEIELLRTLLSFKYALCLASEENSPHHLCSFLYALA 530 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 VFH + + A + R+ A ++ GLN++G+E +EM Sbjct: 531 KVFHKFYE------LCPVLGAPTEPIRQRRMAFCECTAQTLSLGLNLLGIEPLDEM 580 >gi|33864335|ref|NP_895895.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313] gi|39932085|sp|Q7V493|SYR_PROMM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|33641115|emb|CAE22244.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313] Length = 612 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 142/602 (23%), Positives = 245/602 (40%), Gaps = 104/602 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98 G NAA+ L++PL P IA IV ++ +D ++ IAG GFINL + P L Sbjct: 56 GDFQANAALPLAKPLKQPPRQIAAAIVDQLMVDTAFTAICLTPEIAGPGFINLTVRPECL 115 Query: 99 RKILSSIVVSG-----IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + + + + G N + T V ++F S N MHVGH R ++GD+LA + Sbjct: 116 AAEVQARLADARLGVPLVEGDNDGQQPTPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARV 175 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKE 212 + F G+ V R ++ D G Q L + +AL D+ DL + V+ + + Sbjct: 176 LEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALETADAVDLGDLV---VFYRQAKQR 232 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKII---RDDLKALNIQHDIFISEDDFHRGD 269 D + + + E L S++A + R + + + + D+ ++E RG+ Sbjct: 233 FDDDEAFQTTSREEVVKLQGGDPISLKAWSLLCDQSRREFQKIYDRLDVRLNE----RGE 288 Query: 270 P---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL-- 324 + + ++++L G + D Q +F + G D +PL Sbjct: 289 SFYNAYLESVVEDLNVSGLLVSD---------------DGAQCVFLEGVTGKD-GKPLPV 332 Query: 325 --LKSDGSYTYFAADLAYFKCKYER-----GFDNMIYVMGSDHSGYVKRLEAVA--AAVS 375 KSDG + Y DLA + ++ G +IYV + + + + VA A Sbjct: 333 IVQKSDGGFNYATTDLAAMRYRFAAPPQGDGARRVIYVTDAGQANHFAGVFQVAQRAGWI 392 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416 ++ + LV+ DG K+ RAGD + LR ++DE Sbjct: 393 PDAGRLQHVPFGLVQ-GEDGK--KLKTRAGDTVRLRELLDEAVERAESDLRRRLQEEGRD 449 Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 VG +V++ L + F F ++ + N Y+ YA R I Sbjct: 450 EDESFIEQVATTVGLAAVKYADLSQNRITNYQFSFDRMLA-LQGNTAPYLLYAVVRIAGI 508 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 R+ D+ +V E +F +T E L+ L ++ VI P +L Sbjct: 509 ARKGGDL-----------DVTTAELQFSETQEWALVRELLKFDAVIAEVEEELLPNRLCT 557 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 YL++L+ VF+ + + P L+ Q + RL L A + GL+++G+ + Sbjct: 558 YLFELSQVFNRFYD---QVPVLKAEQPSRS----CRLALCRLTADTLKLGLSLLGIPTLE 610 Query: 584 EM 585 M Sbjct: 611 RM 612 >gi|302521100|ref|ZP_07273442.1| arginyl-tRNA synthetase [Streptomyces sp. SPB78] gi|302429995|gb|EFL01811.1| arginyl-tRNA synthetase [Streptomyces sp. SPB78] Length = 597 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 133/591 (22%), Positives = 234/591 (39%), Gaps = 84/591 (14%) Query: 45 LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104 N + L++ +P +A +VA + + V ++G GF+N+ + + + L++ Sbjct: 41 FQANGVLALAKKAKANPRELATQVVAALPDSAVIKDVEVSGPGFLNITVPDEAILRNLAA 100 Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164 +G G + I++ N MHVGH R AV+GD + ++ F+G V R Sbjct: 101 RAAAGERLGVPYAEHPGRTVIDYAQPNVAKEMHVGHLRSAVIGDAVMRMLEFTGETVIRR 160 Query: 165 YYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF 224 ++I D G Q L + + ++DS + ++ + Y + F Sbjct: 161 HHIGDWGTQFGMLIQYLMEHPAELDRSSDSSEVSQAAGEAAMSNLNR----VYKASKALF 216 Query: 225 PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD------FHRGDPSPIRDIID 278 E++ KD + + ++ + D + L H F+ E F + D IRD D Sbjct: 217 DEDEGF---KDRARRRVVDLQAGDEETLAFWHR-FVDESKVYFNALFGKLDMD-IRD-AD 270 Query: 279 NLARQGYVYEGILPPPKSKTTQKCD-MDRKQLLFRS----TMVGDDVDRP--------LL 325 + GY + CD +++ + RS + DDV P + Sbjct: 271 IVGESGY---------NDMLAETCDLLEQSGVAVRSEGALCVFFDDVKGPDGKPVPLIVR 321 Query: 326 KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-V 383 KS+G + Y A DL+ + + ++ D ++YV+ + + + K + A + V Sbjct: 322 KSNGGFGYAATDLSAIRNRVFDLKADTLLYVVDARQALHFKMVFETAKRAGWLSEDVRAV 381 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416 L L DG P K RAG+ + L ++DE Sbjct: 382 QLAFGTVLGADGKPFKT--RAGESVRLVDLLDEAVTRATAVVREKDAKGRLSEDEIAERG 439 Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 VG +V++ L S FD ++ + + V Y+QYAYAR +SI R+A D Sbjct: 440 AQVGIGAVKYADLSTSASRDYKFDLDQMVSLNGDTSV-YIQYAYARIQSILRRATDSGA- 497 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 P E +E L +HL + + AT P+KLA YLY AS++ Sbjct: 498 ------PAPAAHPELPLAPAERALGLHLDAFGDQVLEATHEYAPHKLAAYLYQTASLYTT 551 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + N ++ RL L + +GL ++G+ +P + Sbjct: 552 FYDQCHV-----LSDDNAPEVVANRLFLCELTGKTLAAGLGLLGIRAPKSL 597 >gi|294056123|ref|YP_003549781.1| arginyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221] gi|293615456|gb|ADE55611.1| arginyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221] Length = 592 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 138/596 (23%), Positives = 239/596 (40%), Gaps = 95/596 (15%) Query: 36 RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK----IDPDVDSVFIAGKGFINL 91 RP D G N + ++ +P + + ++ K DP++ + +AG GFIN Sbjct: 34 RPADPKFGDFQANGVLGFAKRNKANPRDLGQQLIDAAKTSGQFDPELVELSLAGPGFINF 93 Query: 92 YLSPSYLRKILSSI-VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +P +L + L + S + G + +G KV I++ SAN H+GH R V+G+ + Sbjct: 94 KFTPQFLWQWLQTYSTTSDYQSGARELKQGRKVVIDYPSANTAKQAHIGHLRPMVIGEAI 153 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSV---FWRYQQALYNNDSDLPEGYYPGVYLK 207 A ++ F G + TR+ ++ D G TL + + Q N + L + Y G L+ Sbjct: 154 ARMLDFCGADTTRDNHVGDWGTNFGTLIMKIKRDGVDLAQLGDNPLAALDQLYKDGSALE 213 Query: 208 HVGKELADKYSSELLNFPE------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 EL D +EL+ + + W IV D S+ A K+ + + DI + Sbjct: 214 TEQPELRDVSRNELVLLQDGDATNTQLWQQIV-DISMAAFDKL----FAQMGVHVDIALG 268 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E F+R + I L+ G E S D + R D + Sbjct: 269 E-SFYR---DKVERIYTELSDIGLAEE-------SDGALVVWHDEVKKFAR------DNE 311 Query: 322 RP----LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRL----EAVAA 372 RP + K DG+ Y + DLA + E D ++Y+ + + ++L E Sbjct: 312 RPYPFNIRKKDGASNYASTDLATILYRVEEFNADEVVYLTDARQQDHFQQLFLTTEKWFK 371 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 A +N + + L D P K ++G+ I L+ ++DE + F ++ KN Sbjct: 372 AKQYPLPTMNHVWWGTI-LGEDKKPFKT--KSGESIKLQELLDEARERA--FAVVTEKNG 426 Query: 433 ELLD--------------FDFCKVKEQSKENPVF--------------YVQYAYARCRSI 464 EL + + + ++ VF Y+ YA AR SI Sbjct: 427 ELPEDERREIANAVGIGALKYSDLSSNRTQDYVFNWDRMLSFEGNTAPYLLYAVARINSI 486 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDT-SELQLIVHLAEYPRVIENATIAQEPYKLAF 523 FR+A ++ P I S +T +EL L L +E P+ L Sbjct: 487 FRKA---------EMNPDAAISGASPLETDAELALARKLMGLVNALELTLNDLRPHFLCT 537 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 YLY+LA + ++ + V + + + RL L +++ +GL ++G+ Sbjct: 538 YLYELAGAYSSFYNANK-------VMVDEQDIRARRLLLCARTRTVLITGLKLLGI 586 >gi|302559209|ref|ZP_07311551.1| arginyl-tRNA synthetase [Streptomyces griseoflavus Tu4000] gi|302476827|gb|EFL39920.1| arginyl-tRNA synthetase [Streptomyces griseoflavus Tu4000] Length = 585 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 135/628 (21%), Positives = 243/628 (38%), Gaps = 119/628 (18%) Query: 24 VEKKILDRIVIERP---------RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI 74 V++++ + RP R N + L++ +P +A +VA + Sbjct: 11 VQQQLASALTATRPEAAGADPLLRRSDRADFQANGILALAKKAKANPRELAAEVVAHLTT 70 Query: 75 DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG 134 + V ++G GF+NL ++ + L++ G G L +++ N Sbjct: 71 GDLIKDVEVSGPGFLNLTIADRAITANLAARHADGERLGVPLKENAGVTVVDYAQPNVAK 130 Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF------------ 182 MHVGH R AV+GD L ++ F+G + ++I D G Q L +F Sbjct: 131 EMHVGHLRSAVIGDALRGMLDFTGEKTIGRHHIGDWGTQFGMLIQYLFEHPGELAPAADV 190 Query: 183 ------------WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230 ++ + L+++D + E V V + DK + EL W Sbjct: 191 DGEQAMSNLNRVYKASRVLFDSDEEFKERARKRV----VALQSGDKETLEL-------WQ 239 Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290 V + V + D++ I+ + + E ++ G P R +++ + EG Sbjct: 240 QFVDESKVYFYSVFEKLDME---IRDEEIVGESAYNEGMPETAR-LLEEMG-VAVRSEGA 294 Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYER- 347 L + F DD PL+ K+DG + Y A+DL + + + Sbjct: 295 LV----------------VFFDEIRGKDDQPVPLIVQKADGGFGYAASDLTAIRDRVQDL 338 Query: 348 GFDNMIYVMG---SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404 ++YV+ S H V A +++ N+ + L DG P K R Sbjct: 339 HATTLLYVVDVRQSLHFRMVFETARRAGWLNDDVTAHNMGYGTV--LGADGKPFKT--RE 394 Query: 405 GDFITLRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDF 437 G+ + L ++DE VG +V++ L S F Sbjct: 395 GETVRLEDLLDEAVQRAAEVVREKARDLTDDEIRERAAQVGIGAVKYADLSTSPSRDYKF 454 Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497 D ++ + + V Y+QYAYAR +SI R+A ++ P E E +E Sbjct: 455 DLDQMVSLNGDTSV-YLQYAYARIQSILRKAGEVRP----------AAHPELELHEAERA 503 Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557 L +HL + + A P+KLA YLY LAS++ + + ++A++ + Sbjct: 504 LGLHLDAFGDTVFEAAAEYAPHKLAAYLYQLASLYTSFYD------KCPVLKADSPEQVE 557 Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L A ++ G+ ++G+ +P + Sbjct: 558 NRLFLCDLTARTLHRGMALLGIRTPERL 585 >gi|318057995|ref|ZP_07976718.1| arginyl-tRNA synthetase [Streptomyces sp. SA3_actG] gi|318077002|ref|ZP_07984334.1| arginyl-tRNA synthetase [Streptomyces sp. SA3_actF] Length = 597 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 133/591 (22%), Positives = 234/591 (39%), Gaps = 84/591 (14%) Query: 45 LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104 N + L++ +P +A +VA + + V ++G GF+N+ + + + L++ Sbjct: 41 FQANGVLALAKKAKANPRELATQVVAALPDSTVIKDVEVSGPGFLNITVPDEAILRNLAA 100 Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164 +G G + I++ N MHVGH R AV+GD + ++ F+G V R Sbjct: 101 RAAAGERLGVPYAEHPGRTVIDYAQPNVAKEMHVGHLRSAVIGDAVMRMLEFTGETVIRR 160 Query: 165 YYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF 224 ++I D G Q L + + ++DS + ++ + Y + F Sbjct: 161 HHIGDWGTQFGMLIQYLMEHPAELDRSSDSSEVSQAAGEAAMSNLNR----VYKASKALF 216 Query: 225 PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD------FHRGDPSPIRDIID 278 E++ KD + + ++ + D + L H F+ E F + D IRD D Sbjct: 217 DEDEGF---KDRARRRVVDLQAGDEETLAFWHR-FVDESKVYFNALFGKLDMD-IRD-AD 270 Query: 279 NLARQGYVYEGILPPPKSKTTQKCD-MDRKQLLFRS----TMVGDDVDRP--------LL 325 + GY + CD +++ + RS + DDV P + Sbjct: 271 IVGESGY---------NDMLAETCDLLEQSGVAVRSEGALCVFFDDVKGPDGKPVPLIVR 321 Query: 326 KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN-V 383 KS+G + Y A DL+ + + ++ D ++YV+ + + + K + A + V Sbjct: 322 KSNGGFGYAATDLSAIRNRVFDLKADTLLYVVDARQALHFKMVFETAKRAGWLSEDVRAV 381 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416 L L DG P K RAG+ + L ++DE Sbjct: 382 QLAFGTVLGADGKPFKT--RAGESVRLVDLLDEAVTRATAVVREKDAKGRLSEDEIAERG 439 Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 VG +V++ L S FD ++ + + V Y+QYAYAR +SI R+A D Sbjct: 440 AQVGIGAVKYADLSTSASRDYKFDLDQMVSLNGDTSV-YIQYAYARIQSILRRATDSGA- 497 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 P E +E L +HL + + AT P+KLA YLY AS++ Sbjct: 498 ------PAPAAHPELPLAPAERALGLHLDAFGDQVLEATHEYAPHKLAAYLYQTASLYTT 551 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + N ++ RL L + +GL ++G+ +P + Sbjct: 552 FYDQCHV-----LSDDNAPEVVANRLFLCELTGKTLAAGLGLLGIRAPKSL 597 >gi|255532212|ref|YP_003092584.1| arginyl-tRNA synthetase [Pedobacter heparinus DSM 2366] gi|255345196|gb|ACU04522.1| arginyl-tRNA synthetase [Pedobacter heparinus DSM 2366] Length = 593 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 131/568 (23%), Positives = 234/568 (41%), Gaps = 123/568 (21%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 KGF+NL ++ +Y + ++ ++ + G KV +E+ S N P+H+GH R + Sbjct: 81 KGFLNLSIADAYWLNLFNTSLLD--PSFAAIKPNGKKVMVEYSSPNTNKPLHLGHVRNNL 138 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY-------QQALYNNDSDLPE 198 +G ++A L+ GYEV + +ND G I L+ W+ + AL D + Sbjct: 139 LGYSVAELLKADGYEVIKVNLVNDRGIHICKSMLA--WQKWGNGETPESALLKGDHLV-- 194 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 G Y ++ K KE+ +K P++K+ Q M+ Sbjct: 195 GKYYVIFDKEYKKEIDTLKLEGQTEEEAKKNAPLIKE--AQKMLL--------------- 237 Query: 259 FISEDDFHRGDPSPIRDIIDNLAR-QGYVYEGILPPPKSKTTQKCDMDR----------- 306 D+ G P ++ID + G+VY G S D D+ Sbjct: 238 -----DWEAGVP----EVIDLWKKMNGWVYAGF---DVSYKNLGVDFDKYYYESNTYLLG 285 Query: 307 ---------KQLLFRS-------TMVGDDVDRPL-LKSDGSYTYFAADLAYFKCKYER-G 348 K + F+ + D +D+ L L++DG+ Y DL + KY+ Sbjct: 286 KDTVDEGLEKGIFFKKPDGSVWIDLTEDGLDQKLVLRADGTSVYITQDLGTAQMKYDDFK 345 Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDF 407 D IYV+G++ + K L + + + A+ ++ L +V L KM R G Sbjct: 346 MDESIYVVGNEQDYHFKVLFLILEKLGKSWAKGLHHLSYGMVDLPSG----KMKSREGTV 401 Query: 408 ITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFD 438 + +V E +G ++++ +L + + L FD Sbjct: 402 VDADDLVAEMIETARAKTEILGKVNDFEEKEKKELFYNIGLGALKYFLLKVEPKKRLLFD 461 Query: 439 FCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497 + + Q P ++QY +AR +S+ +A D+D + V ++ +EL+ Sbjct: 462 PSESIDFQGNTGP--FIQYTHARIKSLLSKA-------DYDFSAKGV--SDASITGTELE 510 Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557 +I+ LA+YP I +A A P LA YLY++A +F+ + E P + ++ N + + Sbjct: 511 MIMLLAKYPAEIASAAKAYSPATLANYLYEVAKLFNKFY---HETPPI--IKEENETVKL 565 Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L A ++ G+ I+G+ P M Sbjct: 566 YRLNLSFVTADVLKRGMRILGITVPERM 593 >gi|300813674|ref|ZP_07093996.1| arginine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512216|gb|EFK39394.1| arginine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 569 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 140/604 (23%), Positives = 254/604 (42%), Gaps = 112/604 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG----KGF 88 ++E P D G + L++ +P IAE + +I +S + A + Sbjct: 27 MVEIPPDYKMGDFAF-PVFSLAKIYRKNPAIIAEELAKKI------ESKYFAKIENKSAY 79 Query: 89 INLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 +N ++ L ++L + +G++ IG+G V +E+ S N P H+GH R V+G Sbjct: 80 LNFFIDKDILAEEVLKETIDKKENFGKSTIGRGKNVCVEYSSTNIAKPFHIGHIRSTVIG 139 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSD-LPEGYYPGVY 205 D++ + F GY ++ D G Q L + W ++ + N D L + Y Sbjct: 140 DSIKRIYQFLGYNTIAINHLGDYGTQFGMLIYAYKKWGDKKKIEENPIDELLKLYVKVNT 199 Query: 206 LKHVGKELADK---YSSELLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257 L KE+ ++ + EL N E KW K+ S++ ++ K L+I+ D Sbjct: 200 LAEEDKEVKEECRYWFKELENQNPEAVEIWKWF---KEVSLKEFNRV----YKMLDIEFD 252 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 + E + P+ I D+ R + E +S+ + ++ Sbjct: 253 SYNGESFYSDKMPALIEDL-----RNRNILE------ESQGAEVINL------------- 288 Query: 318 DDVDRP---LLKSDGSYTYFAADLAYFKCKYE--RGFDNMIYVMGSDHSGYVKRLEAVA- 371 D+ D P ++KSDG+ Y DLA K ++E + F + IYV+GS S + K+L+A Sbjct: 289 DEYDLPPAIVVKSDGTTIYLTRDLAAAKYRHENYKPFRS-IYVVGSQQSLHFKQLKAALK 347 Query: 372 ----------------------AAVSEKKAQINVL------LCELVRLYRDGMPIKMSKR 403 +S +K ++ L E VR D K S++ Sbjct: 348 KAGFDWYDEIIHVAFGMVSLEDGTLSTRKGKVVYLEDVLNRAIEKVREILDQREEKTSRK 407 Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF-YVQYAYARCR 462 + L + VG +++F L+ N + D+ F K S E YVQY +AR Sbjct: 408 IENKEELAEI---VGIGAIKFQELF--NQRIKDYVFNWDKTLSFEGESGPYVQYVHARIS 462 Query: 463 SIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 S+ + + + DF L E+ ++ +L + V+ +A EPY + Sbjct: 463 SLLEKGEFSLDKKFDFSLLQ----------GQEEVDILRNLYNFTDVVIDAHNKFEPYII 512 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 Y+ +LA F+ ++ R + ++ RL L ++V ++I GL+++G+++ Sbjct: 513 TRYIVELAKNFNKFYTQ-------RPILVDDELTKNTRLLLCYSVKNVIREGLDLLGIKA 565 Query: 582 PNEM 585 P +M Sbjct: 566 PEKM 569 >gi|225375605|ref|ZP_03752826.1| hypothetical protein ROSEINA2194_01230 [Roseburia inulinivorans DSM 16841] gi|225212584|gb|EEG94938.1| hypothetical protein ROSEINA2194_01230 [Roseburia inulinivorans DSM 16841] Length = 595 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 133/600 (22%), Positives = 239/600 (39%), Gaps = 87/600 (14%) Query: 36 RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95 RP C + N AM ++ P IA+ +V ++ +P GF+NL + Sbjct: 33 RPDLCEY---QCNGAMAAAKEYKKAPFMIADEVVEKLAANPIFAMAESVKPGFLNLKIDE 89 Query: 96 SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155 +YL ++ + +G + I++ N P+HVGH R A++G+++ + Sbjct: 90 AYLADYVAKMQEDEGRFGCEKTEAPKTIMIDYGGPNVAKPLHVGHLRSAIIGESVKRIGK 149 Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK---- 211 F G+ V + ++ D G Q+ + + R + +Y +D+ G YP + + Sbjct: 150 FMGHNVIGDVHLGDWGLQMGLIITELKLRRPELVYFDDAHT--GEYPEEAPFTISELEEI 207 Query: 212 -ELADKYSSELLNFPEEKWLPIVK----DYSVQAMMKIIRD----DLK----ALNIQHDI 258 A K S E + E + QA++K I + DLK LN+ ++ Sbjct: 208 YPTASKKSKEDEAYKEAAMQATFELQHGKRGYQALLKHILNVSVTDLKRNYANLNVSFEL 267 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVY--EGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 + E D P D++ + G+ Y +G L K D D K++ M+ Sbjct: 268 WKGESDAQPYIP----DMVQKMKDDGFAYISDGALV-----VDVKEDTDTKEI--PPCMI 316 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375 LKSDG+ Y DLA + + D +IYV+ Y ++ A Sbjct: 317 --------LKSDGASLYNTTDLATMVWRMKDYNPDEIIYVVDKRQELYFTQVFRCARKTG 368 Query: 376 EKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434 K + + + +DG P K R G + L H++ + + + + +K E Sbjct: 369 IVKPETELKFLGFGTMNGKDGRPFKT--RDGGVMRLEHLISGINEEMLAKIQENQKTKEN 426 Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA-KDIFPDLD-FDLFPRNVIPQ----- 487 L + + EN V A + + QA KD D+D F F N P Sbjct: 427 LG-----ISTEEAENTAKMVALAAIKYGDLSNQASKDYIFDIDRFTSFEGNTGPYILYTI 481 Query: 488 ----------------------ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 ES SE L++ L+++ V+E+A P+K+ Y+ Sbjct: 482 VRIKSILNKYHGLGKDDSGAVIESAHSKSEKDLMLELSKFNAVMESAFEETAPHKICSYI 541 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 YDLA+ F+ + HG + + N + ++L+ S++ + ++++G +P M Sbjct: 542 YDLANAFNSFY-HG-----TKIMSEENETVQKSYIRLLELTKSVLETCIDVLGFSAPERM 595 >gi|295837204|ref|ZP_06824137.1| arginine-tRNA ligase [Streptomyces sp. SPB74] gi|197698558|gb|EDY45491.1| arginine-tRNA ligase [Streptomyces sp. SPB74] Length = 597 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 134/595 (22%), Positives = 234/595 (39%), Gaps = 92/595 (15%) Query: 45 LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104 N + L++ +P +A+ +VA + + + ++G GF+N+ + + + L++ Sbjct: 41 FQANGVLALAKKAKANPRELADRVVAGLPDSAVIKEIEVSGPGFLNITVPDEAILRNLAA 100 Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164 +G G + I++ N MHVGH R AV+GD + ++ F+G V R Sbjct: 101 RSAAGERLGVPYAEHPGRTVIDYAQPNVAKQMHVGHLRSAVIGDAVMRMLEFTGETVIRR 160 Query: 165 YYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK----ELADKYSSE 220 ++I D G Q L Q L + ++L P + G+ L Y + Sbjct: 161 HHIGDWGTQFGMLI--------QYLVEHPAELDRSADPAEASQEAGEAAMSNLDRVYKAS 212 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD------FHRGDPSPIR 274 F E++ KD + ++ + D + L H F+ E F + D IR Sbjct: 213 KKLFDEDEGF---KDRARHRVVDLQAGDEETLAFWHR-FVDESKVYFNALFGKLDMD-IR 267 Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCD-MDRKQLLFRS----TMVGDDVDRP------ 323 D D + GY + CD +++ + RS + DDV P Sbjct: 268 D-ADIVGESGY---------NDMLAETCDLLEQSGVAVRSEGALCVFFDDVKGPDGRPVP 317 Query: 324 --LLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 + KS+G + Y A DL+ + + ++ D ++YV+ + + + K + A Sbjct: 318 LIVRKSNGGFGYAATDLSAIRNRVFDLKADTLLYVVDARQALHFKMVFETAKRAGWLTED 377 Query: 381 IN-VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 + V L L DG P K RAG+ + L ++DE Sbjct: 378 VRAVQLAFGTVLGADGKPFKT--RAGESVRLVDLLDEAVTRATAVVREKDVKGQLGEDEI 435 Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 VG +V++ L + FD ++ + + V Y+QYAYAR +SI R+A Sbjct: 436 AERGAQVGIGAVKYADLSTSANRDYKFDLDQMVSLNGDTSV-YIQYAYARIQSILRRATA 494 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 P E +E L +HL + + AT P+KLA YLY AS Sbjct: 495 SGA-------PAPAAHTELPLAPAERALGLHLDAFGDQVLEATGEYAPHKLAAYLYQTAS 547 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + N ++ RL L + +GL ++G+ +P + Sbjct: 548 LYTTFYDQCHV-----LSDDNAPEVVANRLFLCELTGRTLAAGLGLLGIRAPKSL 597 >gi|160879423|ref|YP_001558391.1| arginyl-tRNA synthetase [Clostridium phytofermentans ISDg] gi|160428089|gb|ABX41652.1| arginyl-tRNA synthetase [Clostridium phytofermentans ISDg] Length = 594 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 138/602 (22%), Positives = 244/602 (40%), Gaps = 92/602 (15%) Query: 36 RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95 RP C + N A+ ++ P+ IA IV K +P + + GFIN + Sbjct: 33 RPDLCQY---QCNGALAAAKQYKKAPIMIANEIVEHCKDNPVLKEITAIMPGFINFSVKE 89 Query: 96 SYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 +L L S+ V G E +N + +++ N P+HVGH R A++G+++ Sbjct: 90 EFLVDYLQSMSVDERLGCEEAKN----PDTIVVDYGGPNVAKPLHVGHLRPAIIGESIKR 145 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK- 211 ++ F G+ V + ++ D G Q+ + V R Y ++S G YP + + Sbjct: 146 MIRFLGHNVIGDAHLGDWGTQMGLIIAEVRKRQPNLSYFDESYT--GEYPSEAPFTISEL 203 Query: 212 ----ELADKYSSELLNFPEEKWLPIV------KDYSV--QAMMKIIRDDLKA----LNIQ 255 A +YS E F EE + + Y+ +M + +DLK LN+ Sbjct: 204 EEIYPTASEYSKEHPEFREEAKEVVFELQNGHRGYTALWNHIMTVSMNDLKKNYDNLNVH 263 Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGY--VYEGILPPPKSKTTQKCDMDRKQLLFRS 313 D++ E D P ++ L GY + EG L K + D K+L Sbjct: 264 FDVWKKESDAQPYIPG----MVTYLKENGYAKISEGALV-----VDVKEETDTKEL--PP 312 Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAA 372 M+ LKSDG+ Y DLA + E ++IYV+ + E V Sbjct: 313 CMI--------LKSDGASLYATTDLATLVERMELFMPASVIYVVDKRQELH---FELVFR 361 Query: 373 AVSEKK---AQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM-- 426 V + K +N+ + +DG P K R G + L H++D + + + +M Sbjct: 362 CVKKTKLVPKDVNLTFLGFGTMNGKDGKPFKT--RDGGVMRLEHLMDSINEEVYKKIMSN 419 Query: 427 ---------LWRKNSELLDFDFCKVKEQSKENPVF--------------YVQYAYARCRS 463 K L + + Q+ ++ +F Y+ Y R +S Sbjct: 420 REMEEEEAREIAKIVGLAALKYGDLSNQASKDYIFDIDRFTSFEGNTGPYILYTIVRIKS 479 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I + ++ +D E+ SE+ L++ A++ +IE+A P+KL Sbjct: 480 ILAKYQEENKAVDVSKLCIKS-GNTREYGISEVNLMLECAKFNDMIEHAAYENAPHKLCA 538 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+YDLA+ F + EN + + N++ + L+ V I+++ + ++G +P Sbjct: 539 YVYDLANAFSTFY---HEN---KIIAEENKEKQQEWIALIKLVLRILSTCIELLGFSAPE 592 Query: 584 EM 585 +M Sbjct: 593 KM 594 >gi|113461098|ref|YP_719166.1| arginyl-tRNA synthetase [Haemophilus somnus 129PT] gi|123132089|sp|Q0I3B0|SYR_HAES1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|112823141|gb|ABI25230.1| arginyl-tRNA synthetase [Haemophilus somnus 129PT] Length = 577 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 133/595 (22%), Positives = 240/595 (40%), Gaps = 106/595 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LGL+P A+ ++ I + + + IAG GFIN++L ++L + + Sbjct: 37 GDYQANGIMATAKKLGLNPRDFAQKVLDLIDLKNIAEKMEIAGPGFINIFLDKNWLAENI 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + + + G + T V +++ S N MHVGH R ++GD + + F G+ V Sbjct: 97 Q-VTLQDKKLGVTVEEIQTIV-VDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204 R ++ D G Q L L F+R + Y+ND E V Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHASAMELADLEAFYRAAKEHYDNDETFAEKARNYV 214 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 V + D Y + W +V D ++Q + D L Q+D+ + E Sbjct: 215 ----VKLQNGDAYCRTM-------WKKLV-DITMQQNQRNY-DRLNVTLTQNDV-MGESL 260 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 ++ P +I+ +L QG E + Q ++ F++ GD + + Sbjct: 261 YNPMLP----EIVADLKAQGLAVE-------DEGAQVVYLEE----FKNK-DGDPMGVIV 304 Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI-N 382 K DG + Y D+A K +Y D + + S ++++ A ++ K + + Sbjct: 305 QKKDGGFLYTTTDIAAAKYRYHTLKADRALVFSDTRQSQHMQQ----AWLITRKAGYVPD 360 Query: 383 VLLCEL----VRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 E + L +DG P K R+G + L ++DE Sbjct: 361 SFQLEHKNFGMMLGKDGKPFKT--RSGGTVKLTDLLDEAIERADKLISEKSTALSSKEKA 418 Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VG SV++ L + + FD+ + + N Y+QYAY R RSIF + Sbjct: 419 AVIEAVGIGSVKYADLSKNRTTDYVFDW-DIMLSFEGNTAPYMQYAYTRIRSIFNKT--- 474 Query: 472 FPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 D+ + P + + D E L + L ++ ++ P+ L YLY+LA Sbjct: 475 ------DISEEQLHPAKIQLTDEKERLLAIKLLQFEETVQIVGKEGTPHILCAYLYELAG 528 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +F + H + +N + + RL+L + GL+++G+++ +M Sbjct: 529 LFSSFYEH------CPILNNDNENVKLSRLKLALLTEKTLKQGLDLLGIKTVEKM 577 >gi|261392246|emb|CAX49766.1| arginyl-tRNA synthetase (arginine--tRNA ligase; ArgRS) [Neisseria meningitidis 8013] Length = 572 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 124/588 (21%), Positives = 238/588 (40%), Gaps = 84/588 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P +L + + + ++ +G K V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRPEFLAQNIHA-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 + F G V R+ ++ D G Q L + + + +DL + Y Sbjct: 144 RVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203 Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 AD + L +E L + K D S+ + D L ++ + E ++ Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323 ++ ++D+L ++G E D +++F G+ Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 + K G + Y + DLA +Y G D ++YV+ + + ++L + Sbjct: 303 VQKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPEN 360 Query: 381 INVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 + + +DG P K R+GD + L ++ E Sbjct: 361 VGAAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAK 418 Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 VG S+++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 419 IGKTVGIGSIKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG--- 474 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 ++D V+ + E QL L ++ V+++ P+ LA YLY +A++F Sbjct: 475 ---EWDANAPTVLTE-----PLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQIATLF 526 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + P L+ A+ RLQL + GL+++G++ Sbjct: 527 SRFY---EACPILKAESASRNS----RLQLAKLTGDTLKQGLDLLGID 567 >gi|328353614|emb|CCA40012.1| arginyl-tRNA synthetase [Pichia pastoris CBS 7435] Length = 642 Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 155/627 (24%), Positives = 259/627 (41%), Gaps = 104/627 (16%) Query: 11 LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 L+NY+ + KI K L +E G L + R G +P +AE A Sbjct: 68 LRNYITQELSKISGVDKELIFPALEWGTTLEKGDLLIPVPRL--RIKGANPKDLAEQWAA 125 Query: 71 RIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129 + V IA F+ + + S L K ++S + G ++G +GKG KV +EF S Sbjct: 126 AFPKGGYLKDV-IAQGPFLQFFFNTSVLYKLVISDALERGDDFGALPLGKGQKVIVEFSS 184 Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY-QQA 188 N P H GH R ++G +++L G+EV R Y+ D G Q LA+ F RY +A Sbjct: 185 PNIAKPFHAGHLRSTIIGGFISNLYEKLGHEVMRMNYLGDWGKQFGVLAVG-FERYGDEA 243 Query: 189 LYNNDSDLPEGYYPGVYLK---------------HVGKELADKYSS--ELLNFPEEKWLP 231 D P + VY+K G+ L D+ + + + +E + Sbjct: 244 KLKTD---PINHLFEVYVKINQDIKAQSESTEEIAEGQSLDDQARAFFKKMENGDESAVS 300 Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291 + K + ++ K I D LNI++D++ G+ ++I+D A + + +G+L Sbjct: 301 LWKRFRELSIEKYI-DTYARLNIKYDLY-------SGESQVPQEIMDE-ATKIFEEKGLL 351 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GF 349 D+ L T + + ++ K DG+ Y D+ +Y + F Sbjct: 352 SE-----------DQGAKLIDLTKFNKKLGKAIVQKKDGTSLYLTRDVGAAIDRYRKYKF 400 Query: 350 DNMIYVMGSDHSGY-------VKRLE------------AVAAAVSEKKAQINVLLCELVR 390 D MIYV+ S + +KR++ + +S +K + V L ++ Sbjct: 401 DKMIYVIASQQDLHTAQFFEILKRMDFEWAKNLTHINFGMVLGMSSRKGTV-VFLDTILE 459 Query: 391 LYRDGMPIKMSKRAGDFITL---RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QS 446 ++ M M K + + V D VG +V + K +F + ++ + Sbjct: 460 ETKEKMHDVMRKNDSKYQQIANPEEVADLVGISAVMIQDMQSKRINNYEFKWERMTSFEG 519 Query: 447 KENPVFYVQYAYARCRSIFRQAKDI----FPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 P Y+QYA++R SI R A DI P DF L V PQ +E+ L+ L Sbjct: 520 DTGP--YLQYAHSRLASITRNA-DIDLAELPGADFGLL---VEPQ-AEY------LVRLL 566 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDL----ASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 A+YP V+ + EP L YL+ L +S + W G+E P L Sbjct: 567 AQYPDVLRTSLKNHEPSTLVTYLFKLTHQVSSCYDVLWVAGQEKP-----------LATA 615 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 RL L + ++ +G+ ++G+ M Sbjct: 616 RLALYASARQVLYNGMLLLGLTPVERM 642 >gi|170717675|ref|YP_001784750.1| arginyl-tRNA synthetase [Haemophilus somnus 2336] gi|189083536|sp|B0UUF1|SYR_HAES2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|168825804|gb|ACA31175.1| arginyl-tRNA synthetase [Haemophilus somnus 2336] Length = 577 Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 133/595 (22%), Positives = 240/595 (40%), Gaps = 106/595 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LGL+P A+ ++ I + + + IAG GFIN++L ++L + + Sbjct: 37 GDYQANGIMATAKKLGLNPRDFAQKVLDLIDLKNIAEKMEIAGPGFINIFLDKNWLAENI 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + + + G + T V +++ S N MHVGH R ++GD + + F G+ V Sbjct: 97 Q-VTLQDKKLGVTVEEIQTIV-VDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204 R ++ D G Q L L F+R + Y+ND E V Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHASAMELADLEAFYRAAKEHYDNDETFAEKARNYV 214 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 V + D Y + W +V D ++Q + D L Q+D+ + E Sbjct: 215 ----VKLQNGDAYCRTM-------WKKLV-DITMQQNQRNY-DRLNVTLTQNDV-MGESL 260 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 ++ P +I+ +L QG E + Q ++ F++ GD + + Sbjct: 261 YNPMLP----EIVADLKAQGLAVE-------DEGAQVVYLEE----FKNK-DGDPMGVIV 304 Query: 325 LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI-N 382 K DG + Y D+A K +Y D + + S ++++ A ++ K + + Sbjct: 305 QKKDGGFLYTTTDIAAAKYRYHTLKADRALVFSDTRQSQHMQQ----AWLITRKAGYVPD 360 Query: 383 VLLCEL----VRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 E + L +DG P K R+G + L ++DE Sbjct: 361 SFQLEHKNFGMMLGKDGKPFKT--RSGGTVKLTDLLDEAIERADKLISEKSTALSSKEKA 418 Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VG SV++ L + + FD+ + + N Y+QYAY R RSIF + Sbjct: 419 AVIEAVGIGSVKYADLSKNRTTDYVFDW-DIMLSFEGNTAPYMQYAYTRIRSIFNKT--- 474 Query: 472 FPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 D+ + P + + D E L + L ++ ++ P+ L YLY+LA Sbjct: 475 ------DISEEQLHPAKIQLTDEKERLLAIKLLQFEETVQIVGKEGTPHILCAYLYELAG 528 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +F + H + +N + + RL+L + GL+++G+++ +M Sbjct: 529 LFSSFYEH------CPILNNDNENVKLSRLKLALLTEKTLKQGLDLLGIKTVEKM 577 >gi|197284974|ref|YP_002150846.1| arginyl-tRNA synthetase [Proteus mirabilis HI4320] gi|238693143|sp|B4ETN5|SYR_PROMH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|194682461|emb|CAR42387.1| arginyl-tRNA synthetase [Proteus mirabilis HI4320] Length = 576 Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 138/601 (22%), Positives = 235/601 (39%), Gaps = 119/601 (19%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ +G+ P +AE I+ + I D V IAG GFIN++LSP ++ + Sbjct: 37 GDYQANGVMGAAKKMGIPPRQLAEKILEHLDITDIADKVEIAGPGFINIFLSPVWVAQ-Q 95 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + ++ + T V I++ S N MHVGH R ++GD A ++F G+ V Sbjct: 96 AEFALADEHLNITKVTPETIV-IDYSSPNVAKQMHVGHLRSTIIGDASARTLSFLGHNVI 154 Query: 163 REYYI------------------NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204 R ++ N+ A + L F+R + Y+ D E V Sbjct: 155 RANHLGDWGTQFGMLIAYLEKKQNENAADMALADLEEFYREAKKCYDEDEVFAERARNYV 214 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 G D+Y + W +V Q + R LN+ ++EDD Sbjct: 215 VRLQGG----DEYCRTM-------WRKLVDITMQQNQLTYQR-----LNVT----LTEDD 254 Query: 265 FHRGDP--SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 G+ +P + I+ +L +G E + T D + + G+ + Sbjct: 255 I-MGESLYNPMLPGIVADLKAKGLAVES-----EGATVVFLDEYKNK-------EGEPMG 301 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMI--YVMGSDHS------GYVKRLEAVAAA 373 + K DG Y Y D+A K ++E+ N + Y+ H V++ + + Sbjct: 302 VIIQKKDGGYLYTTTDIACAKYRHEQLHANRVLYYIDSRQHQHLMQAWTIVRKAGYIPDS 361 Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------- 416 +S + ++L +DG P K R+G + L ++DE Sbjct: 362 MSLEHHMFGMMLG------KDGRPFK--TRSGGTVRLTDLLDEAHERALTLIREKNPDMD 413 Query: 417 ----------VGSDSVRFMMLWRKNSE--LLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 VG +V++ L + + + D+D E N Y+QYAY R SI Sbjct: 414 EEELNNIARVVGIGAVKYADLSKNRTTDYIFDWDLMLSFEG---NTAPYMQYAYTRVASI 470 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 F++A D+D + + S E QL + L ++ I P+ + Y Sbjct: 471 FKRA-----DIDESALTQPI----SLTQPHEKQLALRLVQFDETITQVAREGTPHVMCAY 521 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 LYDLA F G + + + A + + RL+L A + GL +G+E+ + Sbjct: 522 LYDLAQSFSGFYEN------CPILSAEDDNVRQSRLKLARLTARTLKQGLETLGIETVDR 575 Query: 585 M 585 M Sbjct: 576 M 576 >gi|295108490|emb|CBL22443.1| arginyl-tRNA synthetase [Ruminococcus obeum A2-162] Length = 588 Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 127/601 (21%), Positives = 253/601 (42%), Gaps = 90/601 (14%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF-IAGKGFINL 91 V RP C + N AM ++ P IA+ +VA +K D ++ SV + GFINL Sbjct: 30 VSNRPDLCEY---QCNGAMAGAKAYKKAPFMIADDVVAFLK-DSNIFSVAEVVKPGFINL 85 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + +L + L + +Y N + + I++ N P+HVGH R A++G+++ Sbjct: 86 RVKEEFLAEYLCKMAADP-KYSVNTAEQPKTIIIDYGGPNVAKPLHVGHLRSAIIGESIK 144 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP--------- 202 + F G++V + ++ D G Q+ + + R + +Y +DS EG YP Sbjct: 145 RIGRFVGHKVIGDVHLGDWGLQMGLIITELKHRKPELVYFDDS--FEGEYPEEAPFTISE 202 Query: 203 --GVYLKHVGKELAD-KYSSELLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNI 254 +Y GK D +Y +E L + + + ++ +Q + ++ + LN+ Sbjct: 203 LEEIYPCASGKSKVDEEYRNEALEATHQLQQGKRGYMALWNHIMQVSVTDLKRNYNNLNV 262 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 D++ E D P D++ + QG+ YE D+ L+ Sbjct: 263 SFDLWKKESDAQPYIP----DMVQQMKDQGFAYE----------------DQGALVVDVK 302 Query: 315 MVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV 370 D + P LLKSDG+ Y DLA + + D ++YV+ + ++ Sbjct: 303 EESDTKEIPPCMLLKSDGASLYTTTDLATIVERVKLFDPDEILYVVDKRQELHFIQVFRC 362 Query: 371 AAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429 A K + + + +DG P K R G + L +++ ++ + ++ R Sbjct: 363 ARKTGLVKPETELSFLGFGTMNGKDGKPFKT--RDGGVMRLENLIADIDEEMFHKIVENR 420 Query: 430 --------KNSELLDFDFCK---VKEQSKENPVF--------------YVQYAYARCRSI 464 + +E++ K + Q+ ++ VF Y+ Y R +SI Sbjct: 421 SVKDQDAKETAEIVGLSAIKYGDLSNQATKDYVFDIDRFTSFEGNTGPYILYTIVRIKSI 480 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 + K+ +LD ++P + S+ L++ L ++ IENA + P+K+ Y Sbjct: 481 LNRYKEEGGNLD----AGEILPA---VNASQKNLMLELTKFGSTIENAFEEKAPHKICAY 533 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 +Y++++ F+ + + + ++ L+L+ I+ + ++++G +P+ Sbjct: 534 IYEVSNAFNSFYHE------TKILSEEDQAQKESFLKLLGLTKDILETSIDLLGFSAPDR 587 Query: 585 M 585 M Sbjct: 588 M 588 >gi|88858297|ref|ZP_01132939.1| arginyl-tRNA synthetase [Pseudoalteromonas tunicata D2] gi|88819914|gb|EAR29727.1| arginyl-tRNA synthetase [Pseudoalteromonas tunicata D2] Length = 580 Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 140/583 (24%), Positives = 239/583 (40%), Gaps = 79/583 (13%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AM ++ L +P +A+ I+ + +D + IAG GFIN++L P +L L Sbjct: 37 GDYQINGAMGAAKKLKANPRELAQKIIDHLDLDDVAAQLEIAGPGFINIHLKPEFLAAQL 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + + G + K KV +++ S N MHVGH R ++GD + + F G V Sbjct: 97 VA-ANQDEKLGVQVHAKAQKVVVDYSSPNLAKEMHVGHLRSTIIGDAVVRALEFRGDTVV 155 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG-KELADKYSSEL 221 R+ ++ D G Q L + L + G+ L+ V +L Y Sbjct: 156 RQNHMGDWGTQFGMLI---------------AHLEDLLNQGIDLEAVALADLESFYRDSK 200 Query: 222 LNF-PEEKWLPIVKDYSVQAMMKIIR-DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279 F EE + +DY V+ + L L I + S + +H+ + + +D D Sbjct: 201 KRFDDEEGFADKARDYVVKLQSGDAHCEKLWRLFINTSVKHSSEVYHKLNVTLTQD--DI 258 Query: 280 LARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYF 334 +A Y E I+ K+K + Q++F + G+ + KS G + Y Sbjct: 259 MAESAYNSELHNIIALLKAKNI-AVESQGAQVVFLEELANKEGEPSAFIVQKSGGGFLYA 317 Query: 335 AADLAYFKCKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VR 390 DLA C Y D ++ + + S + ++E A + + + C Sbjct: 318 TTDLA--ACDYRSNKLQADRILIFVDARQSLHFSQVELTARKAGLLRDETSYEFCPFGTM 375 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVR 423 + DG P K R+GD + L +++E VG +V+ Sbjct: 376 MGEDGKPFKT--RSGDTVKLADLLEEAITRAQAKLAERESDLSEQERAEIARKVGIGAVK 433 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVF-YVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 + L + + D+ F S E Y+QYAY R RS+FR+A ++D Sbjct: 434 YADLSKNRTS--DYIFNWDSMLSFEGATAPYLQYAYMRVRSLFRKA-----NIDVSTLNA 486 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 + E + L+L+ ++I AT P+ L YLY+LAS++ + Sbjct: 487 AITIAEPQEKALALKLLQLEEVLDQMINEAT----PHVLCAYLYELASLYMTFY---EAC 539 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P L+ + +L RL L + VA+ + GL ++G+E +M Sbjct: 540 PVLK--DDISTQLRDSRLVLCNLVANTLQQGLGLLGIEVMEQM 580 >gi|254570523|ref|XP_002492371.1| Arginyl-tRNA synthetase [Pichia pastoris GS115] gi|238032169|emb|CAY70124.1| Arginyl-tRNA synthetase [Pichia pastoris GS115] Length = 657 Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 155/627 (24%), Positives = 259/627 (41%), Gaps = 104/627 (16%) Query: 11 LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 L+NY+ + KI K L +E G L + R G +P +AE A Sbjct: 83 LRNYITQELSKISGVDKELIFPALEWGTTLEKGDLLIPVPRL--RIKGANPKDLAEQWAA 140 Query: 71 RIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129 + V IA F+ + + S L K ++S + G ++G +GKG KV +EF S Sbjct: 141 AFPKGGYLKDV-IAQGPFLQFFFNTSVLYKLVISDALERGDDFGALPLGKGQKVIVEFSS 199 Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY-QQA 188 N P H GH R ++G +++L G+EV R Y+ D G Q LA+ F RY +A Sbjct: 200 PNIAKPFHAGHLRSTIIGGFISNLYEKLGHEVMRMNYLGDWGKQFGVLAVG-FERYGDEA 258 Query: 189 LYNNDSDLPEGYYPGVYLK---------------HVGKELADKYSS--ELLNFPEEKWLP 231 D P + VY+K G+ L D+ + + + +E + Sbjct: 259 KLKTD---PINHLFEVYVKINQDIKAQSESTEEIAEGQSLDDQARAFFKKMENGDESAVS 315 Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291 + K + ++ K I D LNI++D++ G+ ++I+D A + + +G+L Sbjct: 316 LWKRFRELSIEKYI-DTYARLNIKYDLY-------SGESQVPQEIMDE-ATKIFEEKGLL 366 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GF 349 D+ L T + + ++ K DG+ Y D+ +Y + F Sbjct: 367 SE-----------DQGAKLIDLTKFNKKLGKAIVQKKDGTSLYLTRDVGAAIDRYRKYKF 415 Query: 350 DNMIYVMGSDHSGY-------VKRLE------------AVAAAVSEKKAQINVLLCELVR 390 D MIYV+ S + +KR++ + +S +K + V L ++ Sbjct: 416 DKMIYVIASQQDLHTAQFFEILKRMDFEWAKNLTHINFGMVLGMSSRKGTV-VFLDTILE 474 Query: 391 LYRDGMPIKMSKRAGDFITL---RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QS 446 ++ M M K + + V D VG +V + K +F + ++ + Sbjct: 475 ETKEKMHDVMRKNDSKYQQIANPEEVADLVGISAVMIQDMQSKRINNYEFKWERMTSFEG 534 Query: 447 KENPVFYVQYAYARCRSIFRQAKDI----FPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 P Y+QYA++R SI R A DI P DF L V PQ +E+ L+ L Sbjct: 535 DTGP--YLQYAHSRLASITRNA-DIDLAELPGADFGLL---VEPQ-AEY------LVRLL 581 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDL----ASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 A+YP V+ + EP L YL+ L +S + W G+E P L Sbjct: 582 AQYPDVLRTSLKNHEPSTLVTYLFKLTHQVSSCYDVLWVAGQEKP-----------LATA 630 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 RL L + ++ +G+ ++G+ M Sbjct: 631 RLALYASARQVLYNGMLLLGLTPVERM 657 >gi|257076127|ref|ZP_05570488.1| arginyl-tRNA synthetase [Ferroplasma acidarmanus fer1] Length = 542 Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 129/538 (23%), Positives = 228/538 (42%), Gaps = 115/538 (21%) Query: 66 ELIVARIKIDPD---VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR--NLIGKG 120 E + +RIK D +D V + G +IN Y+ S K+L ++ S +G+ N Sbjct: 47 EEVYSRIKSSMDMEFIDRVELQG-NYINFYIKSS---KMLDTVENSIGTFGKYPNTFQDT 102 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL- 179 +K IE S+NPTGP+HVG R +++GD++ ++ G +Y++ND+G Q+ +L L Sbjct: 103 SKALIEHTSSNPTGPIHVGRIRNSIIGDSIFRIIERYGTRSLTQYFVNDSGKQVISLYLG 162 Query: 180 -------------SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE 226 ++ YQ+ N DSD P+ +K +EL +KY + + Sbjct: 163 HIKYHKDEEMTVENLLDGYQKIYTNIDSD-PD-------IKREVQELDEKYET-----GD 209 Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286 + + +++ + ++K I D L L I ++ E +F + +ID+L+ Sbjct: 210 NELIKEIQN-TASIVLKSITDSLAKLGIHISTYVWESNFIM--YGNVAQLIDSLS----- 261 Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346 E + K+K + D K++ L + DG+ YFA DL Y K E Sbjct: 262 -EDLKSEGKAKYIEIGD---KKIF-------------LTRQDGTSLYFARDLVYHMFKSE 304 Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406 FD +I V+G DH + K L+ V + ++I+ L V L KMS R G+ Sbjct: 305 -NFDWIIDVLGEDHKDHAKNLDYVLHNYLDFPSRIDYLFYGFVSLDTG----KMSTRKGN 359 Query: 407 FITLR---------------------------HVVDEVGSDSVRFMMLWRKNSELLDFDF 439 +T+ + + + + S+R+ ++ ++ L F + Sbjct: 360 IVTVNDLYEKTVEESAAIIKQKRPEYSKEEVDKISNAIAASSIRYNIIKINANKPLTFRW 419 Query: 440 CK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498 + + + P Y+ YAYAR S+ + N E++ E L Sbjct: 420 DEALNFEGDSAP--YIMYAYARACSLISKTG-------------NTESSTEEYNEFEKAL 464 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW------SHGRENPRLRFVQA 550 I + YP ++N+ +A Y+ L F+ + + EN R+R V+A Sbjct: 465 IKAMYVYPYYLQNSVDFLRADIIAGYILYLVKSFNEFYLNCPIIGNSEENKRMRIVRA 522 >gi|149052278|gb|EDM04095.1| arginyl-tRNA synthetase (predicted), isoform CRA_a [Rattus norvegicus] Length = 591 Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 97/383 (25%), Positives = 184/383 (48%), Gaps = 43/383 (11%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDR--IVIERPRDCAHGHLSTNAAMILSRPLG----- 58 + +SRL+ C IK L+ +V+ + G N+AM +S+ L Sbjct: 75 NINSRLQELF---GCAIKAAYPDLENPPLVVTPSQQPKFGDYQCNSAMGISQMLKAKEQK 131 Query: 59 LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 + P IAE I + + +D V IAG GFIN++L ++ + L++++V+G++ ++G Sbjct: 132 VSPREIAENITKHLPNNEYIDRVEIAGPGFINVHLRKDFVSEQLTNLLVNGVQLP--VLG 189 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 + KV ++F S N MHVGH R ++G++++ L F+GY V R ++ D G Q L Sbjct: 190 ENEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYNVLRLNHVGDWGTQFGMLI 249 Query: 179 LSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236 + ++ L + DL + +Y + +E K + E + + K I+K + Sbjct: 250 AHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFKKRAYECVVLLQSKNPDIMKAW 308 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPP 293 ++ + + R++ + DI + E RG+ ++DI+ +G+V Sbjct: 309 NL--ICDVSREEFNKIYDALDITLIE----RGESFYQDRMKDIVKEFEDKGFV------- 355 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNM 352 + D D ++++F + G V ++KSDG YTY +DLA K + +E + + Sbjct: 356 -------QVD-DGRKIVF---VPGCSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKI 404 Query: 353 IYVMGSDHSGYVKRLEAVAAAVS 375 IYV+ + + + + + A A + Sbjct: 405 IYVVDNGQATHFQTVFAAAQMIG 427 >gi|74227701|dbj|BAE35694.1| unnamed protein product [Mus musculus] Length = 447 Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 90/344 (26%), Positives = 169/344 (49%), Gaps = 38/344 (11%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S+ L + P IAE I + + +D V IAG GFIN++L + Sbjct: 111 GDYQCNSAMGISQMLKAKEQKVSPREIAENITKHLPNNKYIDKVEIAGPGFINVHLRKDF 170 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + L+S++V+G++ ++G KV ++F S N MHVGH R ++G++++ L F+ Sbjct: 171 VSEQLTSLLVNGVQLP--VLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFA 228 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215 GY+V R ++ D G Q L + ++ L + DL + +Y + E Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDADEEFK 287 Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SP 272 K + + + + K I+K +++ + + R++ K + DI + E RG+ Sbjct: 288 KRAYQCVVLLQSKNPDIMKAWNL--ICDVSREEFKKIYDALDITLIE----RGESFYQDR 341 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 ++DI+ +G+V + D D ++++F + G V ++KSDG YT Sbjct: 342 MKDIVKEFEDKGFV--------------QVD-DGRKIVF---VPGCSVPLTIVKSDGGYT 383 Query: 333 YFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375 Y +DLA K + +E + +IYV+ + + + + + A A + Sbjct: 384 YDTSDLAAIKQRLFEEKANKIIYVVDNGQAIHFQTIFAAAQMIG 427 >gi|291563033|emb|CBL41849.1| arginyl-tRNA synthetase [butyrate-producing bacterium SS3/4] Length = 588 Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 135/602 (22%), Positives = 246/602 (40%), Gaps = 98/602 (16%) Query: 36 RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95 RP C + N AM ++ P+ IA +V ++K + V GFINL L+P Sbjct: 33 RPDLCEY---QCNGAMAAAKTYKKKPIDIANGVVEQLKDSEVFEEVNAVMPGFINLKLNP 89 Query: 96 SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155 ++L ++ + + G + + K + I++ AN P+HVGH R AV+G+ L + Sbjct: 90 AFLSGYMNGMK-GAKKLGMDEVEKPETIVIDYGGANVAKPLHVGHLRSAVIGEALKRMGR 148 Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP-----------GV 204 F G++V + ++ D G Q+ + + R + Y ++S G YP + Sbjct: 149 FVGHKVIGDVHLGDWGLQMGLIIEELKDRKPELPYFDESFT--GEYPEEAPFTISELEEI 206 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV-----QAMMKIIRDDLK----ALNIQ 255 Y GK D+ E +E + Y+ + +M + DLK L++ Sbjct: 207 YPAASGKSKVDEAFKER---AQEATFKLQSGYAPYRAIWKHIMNVSLKDLKRNYANLDVD 263 Query: 256 HDIFISEDDFHRGDPSPIRDIID-NLA--RQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312 D++ E D P I+D+ D LA QG + I P +K C + R Sbjct: 264 FDLWKGESDAQPYIPGLIKDLQDKGLAYESQGALVVDIAEPTDTKELPPC-------IVR 316 Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSGYVKRLEAV 370 KSDG+ Y +DLA + E+ F D+ IYV+ + ++ V Sbjct: 317 -------------KSDGAALYATSDLATI-VEREQDFKPDHYIYVVDKRQELHFTQVFRV 362 Query: 371 AAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429 A A + + +DG P K R G + L +++ ++ + +M R Sbjct: 363 AKKAGIVPADRKMDFVGFGTMNGKDGKPFKT--REGGVMRLENLIADIDEAAYNRIMENR 420 Query: 430 KNSE-----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRSI 464 SE L + + Q+ ++ VF YV Y AR SI Sbjct: 421 TVSEDEAKTTAEIVGLAALKYGDLSNQATKDYVFDIDRFTSFEGNTGPYVLYTIARINSI 480 Query: 465 FRQAKDIFPDLD-FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 ++ D + + ++ P + P+++ L++ L+ Y V+ P+K+ Sbjct: 481 LKKYSDTCENTENGEILPPSAEPEKT--------LMLALSRYSDVMLTCFEELAPHKICA 532 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+Y+L++ + H+ H + + ++K + LV ++ + +N++G +P Sbjct: 533 YIYELSNALN-HFYH-----ETKIIAEEDKKKQAGYISLVTLTRDVLMTCINVLGFSAPE 586 Query: 584 EM 585 M Sbjct: 587 RM 588 >gi|261491990|ref|ZP_05988566.1| arginine--tRNA ligase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495282|ref|ZP_05991734.1| arginine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309047|gb|EEY10298.1| arginine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312361|gb|EEY13488.1| arginine--tRNA ligase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 575 Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 137/598 (22%), Positives = 236/598 (39%), Gaps = 114/598 (19%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AM ++ LG++P A+ I+ ++ D + IAG GFIN++L+P +L + Sbjct: 37 GDYQANGAMGAAKKLGMNPREFAQKILENADLNGIADKLEIAGPGFINIFLNPEWLAENT 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 +S + + +G T V I++ S N MHVGH R ++GD + +AF G V Sbjct: 97 NS-SLQAVNFGIKTANPQTIV-IDYSSPNVAKEMHVGHLRSTIIGDAVVRTLAFLGNNVI 154 Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204 R ++ D G Q L L F+R + Y++D E V Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHVSEMELSDLEAFYRAAKEHYDSDEAFAEKARNYV 214 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 V + +DKY + W + V M +++ LN+ +D Sbjct: 215 ----VKLQSSDKYCLTM-------WKKL-----VDITMHHNQENYNRLNV---TLTEKDV 255 Query: 265 FHRGDPSP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDV 320 +P + +I+ +L +G E D ++F GD + Sbjct: 256 MGESLYNPMLPEIVADLKAKGLAVED---------------DGALVVFLDEFKNKDGDPM 300 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 + K DG + Y D+A K +YE D + S + ++++ A ++ K Sbjct: 301 GVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDSRQAQHMQQ----AWLITRKAG 356 Query: 380 QI-NVLLCEL----VRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 + + E + L +DG P K R+G + L+ ++DE Sbjct: 357 YVPDSFSLEHPFFGMMLGKDGKPFKT--RSGGTVKLKDLLDEAVERADKLIAERSTELTA 414 Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467 V SV++ L + + FD+ + + N Y+QYAY R RSIF + Sbjct: 415 EEKAAVVEAVAIGSVKYSDLSKNRTTDYVFDWDNML-TFEGNTAPYMQYAYTRIRSIFAR 473 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 A ++D D ++ E + E L V L ++ + P+ L YLY+ Sbjct: 474 A-----NIDEDALSGSIQLNEPK----ERALAVKLLQFEEALNGVAKEGMPHILCQYLYE 524 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA F + P L + RL+L A + GL+++G+++ +M Sbjct: 525 LAGSFSSFY---EACPILNAEETTKNS----RLKLAALTAKTLKQGLDLLGIKTVEKM 575 >gi|241948189|ref|XP_002416817.1| arginine-trna ligase, putative; arginyl-trna synthetase, cytoplasmic, putative [Candida dubliniensis CD36] gi|223640155|emb|CAX44402.1| arginine-trna ligase, putative [Candida dubliniensis CD36] Length = 643 Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 128/549 (23%), Positives = 222/549 (40%), Gaps = 85/549 (15%) Query: 88 FINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 F+ Y + + L ++ ++ +YG +G G K +EF S N P H GH R ++ Sbjct: 129 FLQFYFAKTLLYNLVIEDVLKRKSDYGYLPLGVGKKAIVEFSSPNIAKPFHAGHLRSTII 188 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPG 203 G +++L G++VTR Y+ D G Q LA+ F R Y ++S L P + Sbjct: 189 GGFISNLYEKVGWDVTRINYLGDWGKQFGLLAVG-FER-----YGDESKLASDPINHLFE 242 Query: 204 VYLKHVGKELADKYSSELLNFP---------EEKWLPIVKDYSVQAMMKIIRD-DLKALN 253 VY+K + +++A + S P +EK + + + + + D D AL Sbjct: 243 VYVK-INQDVAKETSEATGETPGESIDASEQDEKKIQSSTNEEARKFFRRMEDGDESALK 301 Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-----EGILPPPKSKTTQK------- 301 I + R I +D R Y E +P K K K Sbjct: 302 I----------WARFRDLSIEKYVDTYGRLNIKYDVYSGESQVPQDKMKEATKLFEDKGL 351 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359 D+DR L T + + L+ KSDG+ Y D+ +YE FD MIYV+ + Sbjct: 352 IDIDRGAKLIDLTKFNKKLGKALVEKSDGTSLYLTRDVGEAIKRYETYKFDKMIYVIAAQ 411 Query: 360 HS---------------GYVKRLE----AVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400 + LE + +S +K + V L +++ ++ M M Sbjct: 412 QDLHCAQFFEILKQMGFEWAHNLEHINFGMVQGMSTRKGTV-VFLDNILQETKEKMHEVM 470 Query: 401 SKRAGDFITLR---HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQY 456 K + + + D +G +V + K +F + ++ + P Y+QY Sbjct: 471 QKNEEKYAQIEDPDKIADLIGISAVMIQDMQSKRIHNYEFKWDRMTSFEGDTGP--YLQY 528 Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 A++R S+ R++ +L+ F V P S L LA+YP VI+ A Sbjct: 529 AHSRLCSMQRKSGISIEELEHANFELLVEPCAS-------ALARTLAQYPDVIKKAVKGL 581 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 EP + YL+ + + + + +V +++ + RL L A +IN+G+ + Sbjct: 582 EPSTIVTYLFSVTHIVSQCYD-------ILWVSGQEKEVAIARLALYEAARQVINNGMTL 634 Query: 577 IGVESPNEM 585 +G+ N M Sbjct: 635 LGLTPVNRM 643 >gi|328883223|emb|CCA56462.1| Arginyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712] Length = 591 Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 137/597 (22%), Positives = 249/597 (41%), Gaps = 102/597 (17%) Query: 45 LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104 N + L++ L +P +A +VA I + + + ++G GF+N+ ++ + + + L++ Sbjct: 41 FQANGILALAKQLKGNPRELATQVVAAIPENDVLKDIEVSGPGFLNITVTDAAIVRTLAA 100 Query: 105 IVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161 G+ + + GT V I++ N MHVGH R AV+G + ++ F+G V Sbjct: 101 RAADARLGVPFNES---AGTTV-IDYAQPNVAKEMHVGHLRSAVIGAAMVEILEFTGETV 156 Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221 R ++I D G Q L + + L + D D E V + L Y + Sbjct: 157 VRRHHIGDWGTQFGML-IQYLIEHPHELDHKDEDGAE-----VSGEEAMSNLNRLYKASR 210 Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH----DIFISEDDFHRGDPSPIRDII 277 F + +++ +A +++ DL+A + + F+ E + + D + Sbjct: 211 ALFDSD------EEFKTRARARVV--DLQAGDERTLALWQRFVDESKIYF---YSVFDKL 259 Query: 278 DNLARQGYV-----YEGILPPPKSKTTQKCD-MDRKQLLFRS----TMVGDDVDRP---- 323 D R G V Y +L T+ C ++ + RS + DDV P Sbjct: 260 DMDIRDGDVVGESGYNDML-------TETCRILEESGVAVRSEGALCVFFDDVKGPDGNP 312 Query: 324 ----LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378 + KSDG + Y A DL+ + + + +++YV+ + S + K + A Sbjct: 313 TPLIVQKSDGGFGYAATDLSAIRDRVQNLKATSLLYVVDARQSLHFKMVFETARRAGWLN 372 Query: 379 AQIN-VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416 + V L L +DG P K R G+ + L ++DE Sbjct: 373 EDVKAVQLAFGTVLGKDGKPFKT--REGETVRLVDLLDEAVDRATSVVREKAEKVGLTES 430 Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG +V++ L + FD ++ + + V Y+QYAYAR +SIF +A Sbjct: 431 EIVENGQYVGIGAVKYADLSTSAARDYKFDLDQMVSLNGDTSV-YLQYAYARIKSIFGKA 489 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 D P V E E +E L +HL ++ + +A P+KL YLY L Sbjct: 490 GDRTP----------VAHPELELAPAERALGLHLDQFAETVSDAATEYAPHKLTAYLYQL 539 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 AS++ + + P ++ A +++ RL L A ++ G+ ++G+ +P + Sbjct: 540 ASLYTTFYD---QCPVIKPEPA--QEVAENRLFLCDLTARTLHQGMALLGIRTPERL 591 >gi|15894328|ref|NP_347677.1| arginyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824] gi|23822201|sp|Q97K78|SYR_CLOAB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|15023953|gb|AAK79017.1|AE007619_9 Arginyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824] gi|325508456|gb|ADZ20092.1| arginyl-tRNA synthetase [Clostridium acetobutylicum EA 2018] Length = 563 Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 140/549 (25%), Positives = 237/549 (43%), Gaps = 113/549 (20%) Query: 88 FINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 +IN ++ + + ++ + S++ YGR+ +G+G KV IE+ S N P HVGH V+ Sbjct: 77 YINFFVDKADFAKETIESVLSERDNYGRSKVGEGKKVLIEYSSPNIAKPFHVGHLFGTVL 136 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGV 204 G +L + + GY+ R ++ D G Q L +S + R+ + ALY + P + Sbjct: 137 GSSLYKIFSMEGYDCVRINHLGDWGTQFGKL-ISAYKRWCDEDALYKD----PIKELLRI 191 Query: 205 YLK-HVGKE----LADK---YSSELLNFPEEK---WLPIVKDYSVQAMMKIIRDDLKALN 253 Y+K H E L D+ Y L + +E+ W KD S++ K+ + Sbjct: 192 YVKFHKEAEKDPLLEDEGRMYFKRLEDGEKEEVELWTKF-KDLSLREFKKVYNQ----IG 246 Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313 ++ D + E S D ID + + ++ K LL S Sbjct: 247 VEFDSYTGE--------SFYSDKIDAIEEE--------------------LNEKGLLTES 278 Query: 314 T----MVGDDVDRP---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGY 363 ++ D+ + P + K+DG+ Y DLA Y K Y FD IYV+G + S + Sbjct: 279 NGAKVVMLDEYNMPPCIIKKADGASIYATRDLAAAEYRKKTY--NFDKSIYVVGLEQSLH 336 Query: 364 VKR-LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------ 416 K+ L+ + A E + LVR + +G K+S R GD I L ++ E Sbjct: 337 FKQFLKTLELAGHEWSKDCIHVGYGLVR-FAEG---KLSTRNGDVIFLEDLLKESVQKTS 392 Query: 417 -------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQY 456 VG +V F L + FD+ ++ + + P YVQY Sbjct: 393 EIIEEKNPELDNKEEVSRKVGIGAVIFTYLKNGRERDIIFDWKEMLSFEGETGP--YVQY 450 Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 +YAR +SI R+ ++ ++ +D ++ E EFD LI L + I NA Sbjct: 451 SYARAKSILRKLGEVKGNVSYD----KLVSAE-EFD-----LIKQLKGFNGAILNAIDRL 500 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 EP + Y+ ++A F+ ++ ++ +L RL LV A + +I + L++ Sbjct: 501 EPSVITRYVIEVAKAFNKFYNA------YNISNTSDEELKNARLALVEAASIVIKNALSL 554 Query: 577 IGVESPNEM 585 IG++ EM Sbjct: 555 IGIDVVEEM 563 >gi|228991186|ref|ZP_04151145.1| Arginyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442] gi|228768599|gb|EEM17203.1| Arginyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442] Length = 562 Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 143/613 (23%), Positives = 251/613 (40%), Gaps = 137/613 (22%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG---FI 89 +IE P+ G + M L++ P IA+ I ++ +S F + ++ Sbjct: 27 LIETPKQDEFGDAAFPCFM-LAKQYKKAPAIIAKEIAEKLN-----NSFFTKVEAVGPYV 80 Query: 90 NLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 N++ + + +L +I+V EYG+ G+ V I++ S N P +GH R ++G+ Sbjct: 81 NVFFNRHIVSDDVLKAILVEKEEYGQGYFGREKTVVIDYSSPNIAKPFSMGHLRSTMIGN 140 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 +L + GYEV YI D G Q L + Y++ + N+ + E ++ + Sbjct: 141 SLKHIAEKCGYEVVGINYIGDWGTQFGKLITA----YKK--WGNEELVKEDPIRELFKLY 194 Query: 209 VGKELADKYSSELLNFPE-----EKWLPIVKDYSVQAMM---KIIRDDLKALNIQHDIFI 260 V + E+ PE W ++D +A+ + LK + +++ Sbjct: 195 V------HFHEEVKEHPELEEEGRAWFKKLEDGDEEAVFLWNWFRHESLKEFSRIYELLG 248 Query: 261 SEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 E +G+ + D +D L +G + E S Q +++++ + Sbjct: 249 VEFTNFQGEAFYNDKMGDFVDILEEKGLLEE-------SDGAQVVNLEKEDM-------- 293 Query: 318 DDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372 P L KSDG+ Y DL Y + YE FD +YV+G++ S + + V Sbjct: 294 ----PPCLIKKSDGATLYATRDLTAALYRQNTYE--FDKALYVVGAEQSLHFTQFFTVLK 347 Query: 373 AVS----EKKAQINVLLCELVRLYRDGMPIKMSKRAG----------------------- 405 + + A + L + +DG KMS R G Sbjct: 348 KLGYNWVDGMAHVPFGL-----ILKDGK--KMSTRKGKVVLLEEVLEEAITLAEQNIEEK 400 Query: 406 --DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYAR 460 D V +VG +V F L KN + + +F +K + + P YVQY +AR Sbjct: 401 NPDLKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFFLEKMLKFEGETGP--YVQYTHAR 456 Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL--------IVHLAEYPRVIENA 512 SI R+ + +EF+T QL I L +P+V+E A Sbjct: 457 ACSILRK-------------------ENAEFETEAFQLNDDHSWSTIKLLNRFPQVVETA 497 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572 EP +A YL D+A F+ ++ + +R ++ + K + RL LV+AV ++ Sbjct: 498 FFKNEPSHIAKYLLDVAQAFNKYYGN------VRILEEDKEKES--RLALVYAVTIVLKE 549 Query: 573 GLNIIGVESPNEM 585 GL ++G+ +P EM Sbjct: 550 GLRLLGMGAPEEM 562 >gi|225028848|ref|ZP_03718040.1| hypothetical protein EUBHAL_03135 [Eubacterium hallii DSM 3353] gi|224953844|gb|EEG35053.1| hypothetical protein EUBHAL_03135 [Eubacterium hallii DSM 3353] Length = 564 Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 140/580 (24%), Positives = 245/580 (42%), Gaps = 105/580 (18%) Query: 53 LSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGI 110 L+R P IAE + A+I D+ + +IN +L+ ++ ++I+++ V Sbjct: 43 LARVFRKAPNMIAEELTAQINEKGYDIFDKVVNVGAYINFFLAKEAFAKEIMNT--VDTP 100 Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170 ++G+ G+G V I++ S N HVGH R ++G++L + + GY V R ++ D Sbjct: 101 DFGQGTEGEGKTVCIDYSSPNVAKNFHVGHLRTTIIGNSLYKIYSKLGYHVERINHLGDW 160 Query: 171 GAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSELLNF---- 224 G Q L ++ W ++A+ N D +Y+K H E D + + + Sbjct: 161 GTQFGKLIVAYKKWGSKEAVEENGID----ELMKIYVKFHQEAEKDDSLNDQAREWFVKM 216 Query: 225 --PEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279 +E+ L I KD S+ +I K L + D F E F+R ++++ Sbjct: 217 EQGDEEALSIWQWFKDISLVEYKRI----YKLLGMDFDHFTGES-FYR---DKTHEVVEK 268 Query: 280 LARQGYVYEG----ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335 L + + E I+P D D L ++K DGS Y Sbjct: 269 LQEKDLLVESEGAHIVPLD--------DYDMAPCL-------------IMKKDGSSIYAT 307 Query: 336 ADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 DLA Y K Y FD IYV G + + ++ V + Q N++ + Sbjct: 308 RDLAALLYRKRTY--NFDKCIYVTGLEQKLHFAQVFKVIELLGYDWYQ-NLVHVPYGLVS 364 Query: 393 RDGMPIKMSKRAGDFITLRHVVDE-------------------------VGSDSVRFMML 427 +G K+S R G+ I ++ E VG ++ F L Sbjct: 365 MEGG--KLSTRNGNVIYAEQILHEAIEKIHEIINEKNPDLPNKEEVSRQVGIGAILFNDL 422 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ--AKDIFPDLDFDLFPRNVI 485 + + + + F++ K+ E YVQY YARC S+FR+ A ++ ++D+ + Sbjct: 423 YNQRIKDVIFNWDKILNFDGETGP-YVQYTYARCASVFRKVGAVELPAEIDYSVLT---- 477 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 D + + L+ L +P VI+ A EP+ +A + +A F+ + + N Sbjct: 478 ------DDATMNLLKDLTRFPEVIKEAADKYEPFMIARFAVSVAQHFNKFYHDCQIN--- 528 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V+ N KL RL++V +I S L+++G+E P +M Sbjct: 529 --VEEENVKLA--RLKVVDVTMKVIKSALDLLGIECPEQM 564 >gi|254422588|ref|ZP_05036306.1| arginyl-tRNA synthetase [Synechococcus sp. PCC 7335] gi|196190077|gb|EDX85041.1| arginyl-tRNA synthetase [Synechococcus sp. PCC 7335] Length = 585 Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 139/595 (23%), Positives = 231/595 (38%), Gaps = 111/595 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AM L++PL ++P IA I A + + + IAG GFIN L YL + L Sbjct: 40 GDYQANVAMSLAKPLRMNPRAIATKITANLDVTNICEPPSIAGPGFINFKLKTEYLEQQL 99 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G KV +++ S N MHVGH R AV+G+ A ++ F G++V Sbjct: 100 KEMHSSD-RLGVPKANPPQKVIVDYPSPNIAKEMHVGHLRPAVIGECFARVLEFLGHDVL 158 Query: 163 REYYIND---------------------AGAQINTLALSVFWRYQQALYNNDSDLPEGYY 201 + ++ D A A T L+ F+R + ++ D E Sbjct: 159 KVSHVGDWGTPFGMLIAYLQEAYPDPQAAAAASTTGELATFYRQAKKRFDTDEAFKENAR 218 Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 V G + E W + + S ++ KI DL LNI DI Sbjct: 219 QAVVKLQAGDQAV-----------LEAWQRVCQ-LSKRSYRKIY--DL--LNISEDIIDR 262 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 + F+ +P + D++ +L + G + E D K + D Sbjct: 263 GESFY--NPY-LADVVTDLDKAGLLVE--------------DDGAKCVFLEGFTNKDGEP 305 Query: 322 RPLL--KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVA--AAVSE 376 PL+ KS+G Y Y DLA + + E D ++Y + + + + VA A Sbjct: 306 LPLIVQKSNGGYNYATTDLAALRYRITEDKVDRIVYSTDAGQANHFSQFFQVARRAGWVP 365 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416 + +++ LV+ DG +K R+G+ + L+ ++DE Sbjct: 366 ESVELSYAPFGLVQ-GEDGKRLK--SRSGEVVPLQELLDEAIARTRTDVEGRLQQEERTE 422 Query: 417 -----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 VG +V++ L + F + ++ + N Y+ YAY R + I Sbjct: 423 SDDFIQNVAEKVGIGAVKYADLSQNRISNYTFSYDRML-ALQGNTAPYMMYAYVRVQGIS 481 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 R+ + LD Q + SEL L HL + V+ P +L YL Sbjct: 482 RKGEIDLSTLD---------AQVKLTEESELTLAKHLLQLDEVLAEVEKELLPNRLCQYL 532 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 ++L+ F+ + +QA + T RL L A + GL+++G++ Sbjct: 533 FELSQKFNQFYDQ------CSVLQAEEPQRT-SRLVLCDLTARTLKLGLSLLGID 580 >gi|71282384|ref|YP_267854.1| arginyl-tRNA synthetase [Colwellia psychrerythraea 34H] gi|109894983|sp|Q487B1|SYR_COLP3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|71148124|gb|AAZ28597.1| arginyl-tRNA synthetase [Colwellia psychrerythraea 34H] Length = 582 Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 132/607 (21%), Positives = 236/607 (38%), Gaps = 114/607 (18%) Query: 36 RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95 RP+ G N M ++ L +P +A +VA + +D + +AG GFIN++L Sbjct: 33 RPQ---FGDYQANGVMGAAKKLKTNPRELATKVVAELDLDGIASKIELAGPGFINIHLDE 89 Query: 96 SYLRKILSSIV----VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 S+L L+ + + + G + V +++ + N MHVGH R ++GD + Sbjct: 90 SWLAAQLNEVAQDDFIGVAQRGTTPGDESQTVVVDYSAPNLAKEMHVGHLRSTIIGDAVV 149 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNN 192 + F G +V R+ ++ D G Q L L F+R + ++N Sbjct: 150 RALEFRGDKVIRQNHMGDWGTQFGMLIAHLSDKLASDEVAETALADLENFYREAKVRFDN 209 Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252 + + V G E K + ++ + I + A + + LK Sbjct: 210 EEGFADRARADVVKLQSGDEACAKLWQQFID------ISITHSEEIYAKLNV---SLKRS 260 Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312 +I + ++D + ++D L + E +++F Sbjct: 261 DIMGESAYNDD---------LSTVVDELMAKKIAEES---------------QGAKVVFI 296 Query: 313 STMVGDDVDRPLL---KSDGSYTYFAADLAYFKCKYERG---FDNMIYVMGSDHSGYVKR 366 + M D + P+ KS G + Y DL+ C+Y G + +I + + + K+ Sbjct: 297 NEMANKDGEAPVFIVQKSGGGFLYATTDLS--ACRYRSGKLAANRIIIFTDARQALHFKQ 354 Query: 367 LEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE--------- 416 +E VA + C + + DG P K R G I L ++DE Sbjct: 355 VEIVARKAGLLPENVGYQHCPFGMMMGDDGKPFKT--RTGGTIKLAELLDESIVRAAALI 412 Query: 417 ------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 VG +V+F L + + FD+ K + Y+QYAY Sbjct: 413 KEKNPDITDTDLTEISKKVGIGAVKFADLSKNRTSDYIFDW-KTMLSFEGATAPYLQYAY 471 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 +R +SIF +A + D ++ PQE L + L + V++ P Sbjct: 472 SRIQSIFSKAGTVKNDAVINIIE----PQEK-------ALALKLLQLEDVVDAVISECTP 520 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 L YLY+LAS++ + P L+ + + ++ RL L + VA + GL+I+G Sbjct: 521 NLLCNYLYELASLYMSFY---EACPILK--EGISGEVKASRLALCNVVADTLKQGLDILG 575 Query: 579 VESPNEM 585 +E+ M Sbjct: 576 IETMERM 582 >gi|48477675|ref|YP_023381.1| arginyl-tRNA synthetase [Picrophilus torridus DSM 9790] gi|48430323|gb|AAT43188.1| arginyl-tRNA synthetase [Picrophilus torridus DSM 9790] Length = 542 Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 131/569 (23%), Positives = 243/569 (42%), Gaps = 100/569 (17%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M LF D+ +L + +++ K+E K + + HG +S I D Sbjct: 1 MLLFDDYKRQL---ITKLNSVYKIEDK-------DAEINTEHGDISIRLFRIKD-----D 45 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P I I +K + ++ I G+ ++N++L + IL Y ++ Sbjct: 46 PEVIKNNIYNILKKEAYIERFEINGR-YLNIWLKTRLMFDILLDAFDRLGTYP-DVFQDA 103 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 K +E SANPTGP+H+G R +++GD++A ++ +G V +YY+ND+G Q+ L Sbjct: 104 EKALVEHTSANPTGPIHIGRTRNSIIGDSIARIIERTGMRVMTQYYVNDSGKQV----LY 159 Query: 181 VFWRYQQALYNND---SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237 ++ Y++ N + +L +G Y +Y ++ + + ++ SEL E+ +K Sbjct: 160 LYIGYEKFHKNEEPTVENLLDG-YQKIY-NNIDESIENE-VSELSRLYEKGDTETIKKIQ 216 Query: 238 VQA--MMKIIRDDLKALNIQHDIFISEDDF-HRGDPSPIRDIIDNLARQGYVYEGILPPP 294 A ++ I + LK +++ ++ E F G S + +++N Sbjct: 217 NIAGIVLSSIMESLKKIDVNIMSYVWESSFIINGSTSRVMSMLEN--------------- 261 Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMI 353 + K D D K + + + L +SDG+ YF D+AY Y+ G +D +I Sbjct: 262 ----SIKNDGDAKYIEYNGRKI------YLTRSDGTSLYFVRDIAY--HLYKAGDYDFII 309 Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 V+G DH + + LE V + + A + + + + L G KMS R G+ +TL + Sbjct: 310 DVLGEDHKEHARNLEYVLKDLLDFNANLRFVFYDFISL-ESG---KMSTRKGNIVTLDEL 365 Query: 414 VDEVGSDSVRFMMLWRKN--------------SELLDFDFCKVKEQS------------K 447 ++ +S++ + R S + F+ KV + + Sbjct: 366 YNKTVDESIKIVKEKRPEYSEEKAREIAVAIASSSIRFNISKVNQNKPMTFRWSEALNFE 425 Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 + Y+ YAYAR +SI R+ N + ++F+ E LI + YP Sbjct: 426 GDSAPYIMYAYARAKSIIRK------------ISENNTGELNDFNDYERSLIKDMFLYPY 473 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHW 536 +++A P +A YL L F+ + Sbjct: 474 YLKSAFENLRPDIIANYLLLLVKSFNDFY 502 >gi|326692775|ref|ZP_08229780.1| arginyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773] Length = 563 Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 137/594 (23%), Positives = 242/594 (40%), Gaps = 99/594 (16%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +E P+ G ++ L++ L P IA IVA +ID +A ++N +L Sbjct: 27 LEAPKSSELGDVAF-PTFTLAKVLRQAPQQIAANIVA--EIDQTGFEKVVATGPYVNFFL 83 Query: 94 SP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 + R+ L +I+ +YG N G+G V I+ S N PM +GH R V+G+ LA+ Sbjct: 84 DKVATSRETLQTILTLKADYGNNTDGQGENVTIDMSSPNIAKPMSMGHLRSTVIGNALAN 143 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 + A +GY+ + ++ D G Q L Y + ++ ++ P L E Sbjct: 144 ITAKNGYQPIKINHLGDWGTQFGKLI------YAYKTWGSEDEVKAD--PIATLLRYYVE 195 Query: 213 LADKYSS-ELLNFPEEKWLPIVKDYSVQAM----------MKIIRDDLKALNIQHDIFIS 261 DK + LN W ++D +A+ +K + L+I D F Sbjct: 196 FHDKAKEDDSLNDAGRAWFKKLEDGDEEALALWAWFREESLKEFTEIYDRLDIGFDSFNG 255 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E ++ + ++D L + + S+ Q D+ M+ Sbjct: 256 EAFYN----DKMDTVVDQLTAKDLLV-------TSQGAQIVDLSDINPNLTPAMIK---- 300 Query: 322 RPLLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378 ++DG+ Y DLA Y K Y+ F +YV+G + + +++AV + + + Sbjct: 301 ----RTDGATLYMTRDLAAAVYRKDTYD--FAKSLYVVGGEQREHFVQMKAVLSLMGFEW 354 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLR-------------------------HV 413 A +V + +G KMS R GD + L+ V Sbjct: 355 AD-DVEHISFGLITFNGK--KMSTRKGDVVLLKDVLNDAHDLALKQIQEKNPTLENKEEV 411 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 ++VG+ +V F L + DF+ + V+ + P YVQY AR +SI R+A Sbjct: 412 AEQVGAGAVVFHDLMNDRTNNFDFNLEEVVRFEGDTGP--YVQYTNARAKSILRKA---- 465 Query: 473 PDLDFDLFPRNVIPQESEFDTS-ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 P +V D +I L +P ++ A +E +A Y L+ Sbjct: 466 --------PVSVSLDAVTLDDPMTWDIITTLNSFPATVQRAWQQREASIIAKYALTLSRA 517 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ ++++ + + ++ +L RL LV AV ++ L ++GV++P EM Sbjct: 518 FNKYYANSK-------ILTDDDQL-QARLALVEAVTIVLTESLRLLGVKAPEEM 563 >gi|325134676|gb|EGC57316.1| arginyl-tRNA synthetase [Neisseria meningitidis M13399] gi|325143433|gb|EGC65760.1| arginyl-tRNA synthetase [Neisseria meningitidis M01-240013] Length = 572 Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 123/588 (20%), Positives = 238/588 (40%), Gaps = 84/588 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P +L + + + ++ +G K V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRPEFLAQNIQT-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ F G V R+ ++ D G Q L + + + +DL + Y Sbjct: 144 RVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203 Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 AD + L +E L + K D S+ + D L ++ + E ++ Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323 ++ ++D+L ++G E D +++F G+ Sbjct: 262 ----DDLQAVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 + K G + Y + DLA +Y G D ++YV+ + + ++L + Sbjct: 303 VQKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPEN 360 Query: 381 INVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 + + +DG P K R+GD + L ++ E Sbjct: 361 VGAAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAK 418 Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 VG +V++ L + + FD+ + + N Y+QYAY R +S+FR+ Sbjct: 419 IGKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKTG--- 474 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 ++D V+ + E QL L ++ V+++ P+ LA YLY +A++F Sbjct: 475 ---EWDADAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLF 526 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + P L+ A+ RLQL + GL+++G++ Sbjct: 527 SRFY---EACPILKAEGASRNS----RLQLAKLTGDTLKQGLDLLGID 567 >gi|321455642|gb|EFX66770.1| hypothetical protein DAPPUDRAFT_302451 [Daphnia pulex] Length = 632 Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 144/592 (24%), Positives = 250/592 (42%), Gaps = 92/592 (15%) Query: 43 GHLSTNAAMILSRPL-----GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N AM LS+ L L+P +A + + + ++++ +AG GFIN+ L S+ Sbjct: 84 GDYQFNGAMSLSKLLKTLGKSLNPREVAAAVQKCVPPNEVIETLDLAGPGFINIKLKASF 143 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 +++ LS +V GI + K +V ++F S N MHVGH R ++GD++ L+ F Sbjct: 144 VQEQLSLLVTRGIRPPCGVEKK--RVMVDFSSPNIAKEMHVGHLRSTIIGDSICRLLEFL 201 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217 G++V R ++ D G Q L + R+ + E P L+ KE ++ Sbjct: 202 GHDVLRINHVGDWGTQFGMLLAHLEDRF--------PNFAEETPPIGDLQSFYKESKIRF 253 Query: 218 SSELLNFPEEKWLPIVKDYS--------VQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 S+ +F + + +VK S QA+ + R + + + + DI I E RG+ Sbjct: 254 DSD-ADFKKRAYACVVKLQSHDPVYIKGWQAICDVSRREFQKIYDRLDIKIKE----RGE 308 Query: 270 PSPIRDIIDN----LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 S +D++ L G + E D RK + G V ++ Sbjct: 309 -SFYQDLMKKTVMLLEEAGVLKE--------------DEGRKVMF----APGIAVPLTIV 349 Query: 326 KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQI 381 KSDG YTY +D+A + + ++ D ++YV+ SG+ + + A A + KK ++ Sbjct: 350 KSDGGYTYDTSDMAAIRQRVHDEAADWVVYVVDLGQSGHFETIFACAEFAGWLDRKKTRV 409 Query: 382 -----NVLLCE--------------LVRLYRDGM---PIKMSKRAGDFI----TLRHVVD 415 V+L E LV L +G+ K+ ++ D + L Sbjct: 410 EHVGFGVVLGEDRKKFKSRSSETVRLVDLLDEGLRRAKEKLIEKERDKVLTPEELESAQQ 469 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 V +++ L + F F K+ E K N Y+ YAY R RSI R A D Sbjct: 470 AVAYGCIKYSDLAHNRNGDYVFSFDKMLE-DKGNTAVYLLYAYTRIRSIARTAN--VTDE 526 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + IP E E++L L +P I T + L +LY++++ F Sbjct: 527 QIKKAAADGIPLSHE---KEMKLAKLLLRFPETIVRLTFDLCLHPLCEFLYEVSTTFTEF 583 Query: 536 W--SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + E R + M R+ L A A+++ +++G++ +M Sbjct: 584 YDVCYCVEKDR---TTGQIVHINMDRMALCEATANVMAQCFSLLGLKPIQKM 632 >gi|81429031|ref|YP_396031.1| arginyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K] gi|109894998|sp|Q38VQ9|SYR_LACSS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|78610673|emb|CAI55724.1| Arginyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K] Length = 563 Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 133/595 (22%), Positives = 259/595 (43%), Gaps = 100/595 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IE P+ G + IL++ L P IA+ +V ++ + + V IA +IN + Sbjct: 27 LIETPKTSDLGDYAF-PTFILAKTLRKAPQQIAQDLVDQMDV-AGFEKV-IANGPYINFF 83 Query: 93 L-SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L ++ +IL +++ +YG + +G G V I+ S N P+ +GH R V+G+++A Sbjct: 84 LDKAAFSDQILKTVLTEAAKYGESDLGHGGNVPIDMSSPNIAKPISMGHLRSTVIGNSIA 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ G+ + ++ D G Q L ++ Y++ + ++ ++ E + +V Sbjct: 144 KILTKVGFNPIKINHLGDWGTQFGKLIVA----YKK--WGSEEEVKEDPITNLLKYYV-- 195 Query: 212 ELADKYSSELLNFPE-----EKW---LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 K+ E + PE W L + + Q + LK +D+ E Sbjct: 196 ----KFHQEDVEHPELDDEARAWFRKLEAGDEEATQLWSWFRSESLKEFQKIYDMLGVEF 251 Query: 264 DFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 D + G+ + +++ + +G + E S+ + D+ L Sbjct: 252 DSYNGEAFYNDKMDAVVEAIESKGLLQE-------SRGAEIVDLTAYNL----------- 293 Query: 321 DRPLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV------- 370 P L KSDG+ Y DLA +++ F +YV+G + + +L+AV Sbjct: 294 -NPALIKKSDGATLYMTRDLAAAMYRHDTYNFVQSLYVVGGEQREHFNQLKAVLKEMGND 352 Query: 371 ----------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414 +S + ++ +LL E++ ++ + D V Sbjct: 353 WSDEIHHIPFGLITQGGKKLSTRSGRV-ILLEEVLNDAVKLAGAQIEAKNPDLPNREEVA 411 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDF---CKVKEQSKENPVFYVQYAYARCRSIFRQA-KD 470 +VG +V F L KN L +FDF V+ + + P YVQY AR +SI R+A ++ Sbjct: 412 KQVGIGAVIFHDL--KNDRLDNFDFDLEEVVRFEGETGP--YVQYTNARAQSILRKANQE 467 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 + D V+ ++ +D ++ L+ +P VI A+ EP +A Y LA Sbjct: 468 VVVDDQL------VVADDNAWDVLKM-----LSNFPAVIARASKEYEPSIVAKYALRLAK 516 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ ++++ + + A++ + RL LV +V+ ++ + L+++GV++P EM Sbjct: 517 AFNKYYANSK-------ILADDDQRNA-RLSLVKSVSIVLETALDLLGVQAPKEM 563 >gi|227534771|ref|ZP_03964820.1| arginine--tRNA ligase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187527|gb|EEI67594.1| arginine--tRNA ligase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 560 Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 145/597 (24%), Positives = 250/597 (41%), Gaps = 103/597 (17%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 + +IE P+ G + L++ + P IA +V +I + P + V G G++N Sbjct: 25 KSLIETPKSSDLGDYAF-PTFSLAKIMHRAPKMIASDLVGQIDVTP-FEKVKAVG-GYVN 81 Query: 91 LYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 YL S+ +L I +G YG IG G V I+ S N PM +GH R V+G+ Sbjct: 82 FYLDKISFAHDVLKVIAQAGEHYGDANIGSGN-VPIDMSSPNIAKPMSMGHLRSTVIGNA 140 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLK- 207 LA++++ GY + ++ D G Q L ++ W + A+ + YY + K Sbjct: 141 LANILSKIGYTPIKINHLGDWGTQFGKLIVAYKKWGSEDAVKADPIKNLLHYYVEFHEKA 200 Query: 208 HVGKELADK---YSSELLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259 EL D+ + L + EE +W V + KI+ D + N + F Sbjct: 201 EANPELGDEARAWFKRLEDGDEEAIALWRWFRTVSLAEFNRIYKILGVDFDSYN--GEAF 258 Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM-DRKQLLFRSTMVGD 318 ++ + D++ L + + KT+Q ++ D ++ Sbjct: 259 YNDK---------MADVVKRLEDKHLL----------KTSQGAEIVDLSAYNLNPALIK- 298 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV------- 370 KSDG+ Y DLA + E F +YV+G++ + ++L+AV Sbjct: 299 -------KSDGATLYMTRDLAAAIFRKEHYHFVQSLYVVGNEQREHFQQLKAVLLEMGYD 351 Query: 371 ----------------AAAVSEKKAQINVLLCELVRLYRDGMPI---KMSKRAGDFITLR 411 +S +K N++L E + RD + + +++++ D Sbjct: 352 WANDIHHIPFGLITANGKKLSTRKG--NIILLE--NVLRDAVGLAKQQIAEKHPDLPNAD 407 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQA 468 V EVG +V F L KN L +FDF V+ + + P YVQY AR SI R+A Sbjct: 408 KVAHEVGVGAVIFHDL--KNERLDNFDFNLEEVVRFEGETGP--YVQYTNARANSILRKA 463 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 I P P+ + D + ++ L +YP ++ A EP +A Y L Sbjct: 464 A-IDP-----------APEVALSDPAAWDVLRALGDYPSMVLRAAKEYEPSVIAKYALRL 511 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A F+ ++++ + V + +L RL +V A ++ + L ++GV +P EM Sbjct: 512 AKAFNKYYANVK-------VLVEDSELPA-RLAMVKATTQVLTNALQLLGVGAPEEM 560 >gi|312882113|ref|ZP_07741863.1| arginyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122] gi|309370249|gb|EFP97751.1| arginyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122] Length = 577 Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 136/603 (22%), Positives = 236/603 (39%), Gaps = 122/603 (20%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG++P A+ ++ +K+D IAG GFIN++LS +L Sbjct: 37 GDYQANGVMGVAKKLGMNPREFAQKVIDELKLDGIASKTEIAGPGFINIFLSEEFL-ATQ 95 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + +S G + + T V ++ + N M V H R V+GD + + F G++V Sbjct: 96 ADYALSDDRLGIDKEKQQTVVT-DYSAPNVAKEMAVHHIRSTVIGDAVTRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGYYPG 203 R +I D G Q L L F+R + L++ D E + Sbjct: 155 RANHIGDWGTQFGMLIANLERVQQESGEVSMELSDLEAFYRDSKKLFDED----EAFATK 210 Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNIQH 256 V + D+Y + + W +V +Q + + RDD+ ++ + Sbjct: 211 ARNYVVKLQSGDEYCAGM-------WKKLVDITMIQNQRNYDRLNVSLSRDDVMGESMYN 263 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D+ + I+ +L ++G V E + Q +D F++ Sbjct: 264 DM--------------LGGIVADLKKKGLVEE-------DEGAQVVFLDE----FKNK-D 297 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVS 375 G+ + + KSDG + Y D+A K +YE G + ++Y + S ++ + A + Sbjct: 298 GEPMGVIVQKSDGGFLYTTTDIACAKYRYETLGANRVLYFIDSRQHQHLMQ----AWTIV 353 Query: 376 EKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430 K I NV L + L +DG P K RAG + L ++DE + + ++ K Sbjct: 354 RKAGYIPENVTLEHHAFGMMLGKDGKPFKT--RAGGSVKLTDLLDEAEERAAK--LIESK 409 Query: 431 NSEL-----------LDFDFCKVKEQSKE-----------------NPVFYVQYAYARCR 462 N +L + K + SK N Y+QYAY R Sbjct: 410 NPQLSAEEKTAIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVA 469 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 SIF +A+ L D+ D E LI L ++ ++ P+ L Sbjct: 470 SIFAKAEISMDSLQGDI---------KIVDEKEKALITKLLQFEEAVKAVASEGLPHVLC 520 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 YL++LA F + + + + RL+L A I GL+++G+E+ Sbjct: 521 TYLFELAGQFSSFYE------ACPILNNEDESIKQSRLKLAALTAKTIKQGLDLLGIETL 574 Query: 583 NEM 585 M Sbjct: 575 ERM 577 >gi|325205746|gb|ADZ01199.1| arginyl-tRNA synthetase [Neisseria meningitidis M04-240196] Length = 572 Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 123/588 (20%), Positives = 238/588 (40%), Gaps = 84/588 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P +L + + + ++ +G K V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRPEFLAQNIQT-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ F G V R+ ++ D G Q L + + + +DL + Y Sbjct: 144 RVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203 Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 AD + L +E L + K D S+ + D L ++ + E ++ Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323 ++ ++D+L ++G E D +++F G+ Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 + K G + Y + DLA +Y G D ++YV+ + + ++L + Sbjct: 303 VQKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPEN 360 Query: 381 INVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 + + +DG P K R+GD + L ++ E Sbjct: 361 VGAAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAK 418 Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 VG +V++ L + + FD+ + + N Y+QYAY R +S+FR+ Sbjct: 419 IGKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKTG--- 474 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 ++D V+ + E QL L ++ V+++ P+ LA YLY +A++F Sbjct: 475 ---EWDADAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLF 526 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + P L+ A+ RLQL + GL+++G++ Sbjct: 527 SRFY---EACPILKAEGASRNS----RLQLAKLTGDTLKQGLDLLGID 567 >gi|228470787|ref|ZP_04055635.1| arginyl-tRNA synthetase [Porphyromonas uenonis 60-3] gi|228307460|gb|EEK16465.1| arginyl-tRNA synthetase [Porphyromonas uenonis 60-3] Length = 604 Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 132/586 (22%), Positives = 237/586 (40%), Gaps = 98/586 (16%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR-NLIGK 119 P AE I A+++ D+ + + KGF+NL L+ S L I + YG + Sbjct: 56 PQETAETIGAKLQEQTDLIASYGVVKGFLNLTLTDSAWLAALREIAETP-HYGHITPTEQ 114 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 V IE+ S N P+H+GH R ++G +LA ++ SG+ V + +ND G I L Sbjct: 115 SPLVMIEYSSPNTNKPLHLGHVRNNLLGYSLAQILEASGHRVVKTNIVNDRGVHICKSML 174 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 + + R+ S + G Y KE Y +EL E P D V+ Sbjct: 175 A-WLRWGNGETPESSGKKGDHLIGDYYVRFDKE----YRAELAQIRAEH--PDWSDEEVE 227 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII------------DNLARQGYVY 287 A +++ D + L + +GDP +R + + R G + Sbjct: 228 AKSQLMADARQMLR----------QWEQGDPE-VRALWRKMNEWVYKGFDETYKRMGVSF 276 Query: 288 EGILPPPKSKTTQKCDMDR--KQLLFRSTMVG--------DDVDRP-LLKSDGSYTYFAA 336 + I + + ++ R K+ LF G + +D+ LL+SDG+ Y Sbjct: 277 DKIYYESDTYLVGREEVLRGLKEGLFEQHEDGSVWADFEAEGLDKKILLRSDGTSVYITQ 336 Query: 337 DLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRD 394 D+ K +Y+ D MIYV+G++ + + L + + K + + +V L Sbjct: 337 DIGTAKLRYQDFPIDQMIYVVGNEQEYHFQVLSLLLDRLGYKWGKSLTHFSYGMVELPHG 396 Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR----------------KNSELLDFD 438 KM R G + ++D + ++ + + +E++ Sbjct: 397 ----KMKSREGTVVDADDLMDAMRDTALEVARTAQQAKGVALADKPTAEELRTAEMVGLG 452 Query: 439 FCK---VKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 K +K ++N +F ++QY YAR S+ ++A + + Sbjct: 453 ALKYFILKVDPRKNMMFNPEESIDFNGNTGPFIQYTYARICSLLQKADE--------MGY 504 Query: 482 RNVIPQESEFDTS--ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 ++ +P+ E S E L+ L +YP V++ A + P ++A Y YDL ++ + Sbjct: 505 KHQLPEGGELALSSYETALVQQLLDYPTVVQEAAESYSPARIANYTYDLVKGYNQFYH-- 562 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + L MRLQL VA I+S + ++G+ P M Sbjct: 563 ----ECSVLREEDEALRSMRLQLSQTVAETIHSAMGLLGIALPERM 604 >gi|66912037|gb|AAH97633.1| LOC733251 protein [Xenopus laevis] Length = 650 Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 147/588 (25%), Positives = 245/588 (41%), Gaps = 83/588 (14%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +++ L + P IA+ IV I + V+ V IAG GFIN++L + Sbjct: 101 GDYQCNSAMGITQMLKAMNQKVSPREIADKIVKNIPTNELVEKVDIAGPGFINVHLHKDF 160 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 K LS ++V+G++ +I + +V ++F S N MHVGH R ++G+++ L F Sbjct: 161 TSKQLSKLLVNGVQ--PPVIEEKKRVVVDFSSPNIAKEMHVGHLRSTIIGESICRLFEFV 218 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217 G++V R ++ D G Q L + ++ L + P G +L Y Sbjct: 219 GHDVLRLNHLGDWGTQFGMLIAHLQDKFPDYLTISP---PIG------------DLQSFY 263 Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277 F E++ V + D ++A N+ + +S +F + I Sbjct: 264 KESKKRFDEDEEFKKRAYQCVVQLQNKTPDIIQAWNLICE--VSRREFQK--------IY 313 Query: 278 DNL-----ARQGYVYE----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 DNL R Y+ G++ + K + D RK ++F G + ++KSD Sbjct: 314 DNLDISIIDRGESFYQDRMIGVVKEFEEKGLVQVDEGRK-VVFPP---GCSIPLTIVKSD 369 Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHS-------------GY----VKRLEAV 370 G +TY +DLA K + E D +IYV+ S + G+ V R+E Sbjct: 370 GGFTYDTSDLAALKQRLQEEKADMLIYVIDSGQAIHMQNVFSAGQMIGWYDPKVTRVEHA 429 Query: 371 AAAV--SEKKAQINVLLCELVR---LYRDGMPIKMSK---RAGDFI----TLRHVVDEVG 418 V E K + + VR L +G+ M K + D + L V Sbjct: 430 GFGVVLGEDKKKFKTRSGDTVRLIDLLEEGLKRSMDKLKDKGRDTVLTPEELLAAQRSVA 489 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 +++ L F F K+ + + N Y+ YAY R RSI R A DL Sbjct: 490 FGCIKYADLSHNRMNDYIFSFDKMLD-DRGNTAAYLLYAYTRIRSIARLANISDDDLHKA 548 Query: 479 LFPRNV-IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 V + E E+ S+ L +P +++ + L YLY+LA+ F + Sbjct: 549 AKETEVTLEHEKEWKLSKCIL-----RFPEILQKILEDLLLHTLCDYLYELATTFTEFYD 603 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + R K+ M RL L A A+++ G +I+G++ +M Sbjct: 604 NCYCVEKDRQT-GQIIKVNMSRLLLCDAAAAVMAKGFDILGLKPVQKM 650 >gi|299537113|ref|ZP_07050416.1| arginyl-tRNA synthetase 2 [Lysinibacillus fusiformis ZC1] gi|298727354|gb|EFI67926.1| arginyl-tRNA synthetase 2 [Lysinibacillus fusiformis ZC1] Length = 557 Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 145/598 (24%), Positives = 251/598 (41%), Gaps = 110/598 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E+P+ G ++ L++ P IA I ++I D ++ V G G++N++ Sbjct: 25 LLEKPKSLELGDVAF-PCFTLAKVWKKSPQNIAAHIASQINHD-SIERVQAVG-GYVNIF 81 Query: 93 LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + +++L I+ +YG GT V ++F S N P +GH R V+G+ LA Sbjct: 82 LDQQKVTQQVLRKILRDKQQYGTTPTKMGTVV-LDFSSPNIAKPFSMGHLRSTVIGNALA 140 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ +GY+ R ++ D G Q L ++ W +QA+ S P +Y+K Sbjct: 141 NIAEKNGYQAIRINHLGDWGTQFGKLIVAYQLWGDKQAI----SASPIEELLKIYVKF-- 194 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYS--VQAMMKIIRDD--------LKALNIQHDIFI 260 E A++ + LN ++D + QA+ + RD + L I D F Sbjct: 195 HEEAEQDPT--LNEQARAAFKALEDGNEEAQALWQWFRDVSFVEFQTIYELLGIHFDAFT 252 Query: 261 SEDDFHRGDPSPIRDIIDN---LARQG-YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 E ++ PS + ++ + +A +G YV E PP C + Sbjct: 253 GEAFYNDKMPSVVTELKEKGLLVASEGAYVVEMEEMPP-------CLIK----------- 294 Query: 317 GDDVDRPLLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373 K+DG+ Y DLA Y + Y+ M YV+G++ S + K+L V Sbjct: 295 ---------KTDGATLYATRDLAAALYRQQHYQP--QKMFYVVGNEQSLHFKQLFQVIEK 343 Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433 + A+ N+ + +DG KMS R G + L V+ E + + R M +KN Sbjct: 344 MGYPWAK-NLQHVSFGMMLKDGK--KMSTRKGKVVLLADVLAEAITTAQRNMG--QKNPS 398 Query: 434 LLDFD------------FCKVKEQSKENPVF--------------YVQYAYARCRSIFRQ 467 L + + F VK + F YVQY YAR SI + Sbjct: 399 LPNKEQVAKQVGVGAVIFNDVKSYRLNDIEFSIEQMMNFEGETGPYVQYTYARICSILDK 458 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 AK D+ F P +I+ L ++P+ + A +P ++A Y Sbjct: 459 AKAPTQDILFKSLGEQAWP-----------MILLLEQFPKTVAMAFEQADPSQIAKYALQ 507 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA +F+ +++ + + A++ + RL L +VA ++ L ++G+ESP M Sbjct: 508 LARLFNKYYAQYK-------ILADDEQ-QASRLALCQSVAIVLKESLALLGIESPENM 557 >gi|153954173|ref|YP_001394938.1| arginyl-tRNA synthetase [Clostridium kluyveri DSM 555] gi|219854782|ref|YP_002471904.1| hypothetical protein CKR_1439 [Clostridium kluyveri NBRC 12016] gi|189083529|sp|A5N8F9|SYR_CLOK5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|254782955|sp|B9E1W5|SYR_CLOK1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|146347054|gb|EDK33590.1| ArgS [Clostridium kluyveri DSM 555] gi|219568506|dbj|BAH06490.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 566 Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 132/543 (24%), Positives = 230/543 (42%), Gaps = 98/543 (18%) Query: 88 FINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N ++ + L I++ G YG + +G+G V +E+ S N P HVGH + Sbjct: 77 YVNFFVDKKIFTEYTLKEILLKGDSYGSSDMGEGKNVVVEYSSPNIAKPFHVGHLFSTSI 136 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206 G+ L ++ F GY TR ++ D G Q L ++ + R+ A N + E +Y+ Sbjct: 137 GNALYKMINFQGYNCTRINHLGDWGTQFGKL-IAAYNRWCNAEELNRDPIKE--LLRIYV 193 Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ--AMMKIIRD-DLKALNIQHDIFISED 263 K E A+K S LN + ++D S + + K +D L+ +D+ + Sbjct: 194 KF--HEEAEKDPS--LNEEGRMYFKKLEDGSEEEIKLWKKFKDLSLREFKKVYDLLKVDF 249 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST----MVGDD 319 D + G+ S D +D + + +D+K LL S ++ D+ Sbjct: 250 DSYAGE-SFYTDKMDAVVEE--------------------IDKKGLLVESNGAKVVLLDE 288 Query: 320 VDRP---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373 + P + KSDG+ Y DLA Y K Y+ F IYV+G D S + K++ Sbjct: 289 YNIPPCIVKKSDGTTIYATRDLAAAIYRKKTYD--FYKSIYVVGLDQSLHFKQVFTTLKL 346 Query: 374 VSEKKAQINVLLCE-----LVRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416 + + A C+ LVR K+S R GD I L ++++ Sbjct: 347 MGKDWADS----CKHVGFGLVRFANK----KLSTRKGDVIFLEELLNKSVERTLEIINEK 398 Query: 417 -------------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCR 462 +G +V F L + + FD+ ++ + + P YVQY+YAR + Sbjct: 399 NPKLENKEEAAKKIGIGAVIFTYLKNNREKDIVFDWNEMLSFEGETGP--YVQYSYARGK 456 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 SI R++++ D N I E +L+ L + + I NA EP+ + Sbjct: 457 SILRKSEEASYD-------ENQIDYSKLGSKEEFELVKILENFNKSIINAINRLEPFIVT 509 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 Y+ D+A F+ ++ + A + + RL LV ++ +GLN++G+E Sbjct: 510 RYVIDVAKAFNKFYNAHS------IMNAADENIKKARLYLVKCTCQVLKNGLNLMGIEVV 563 Query: 583 NEM 585 +M Sbjct: 564 EKM 566 >gi|218673265|ref|ZP_03522934.1| arginyl-tRNA synthetase [Rhizobium etli GR56] Length = 106 Score = 100 bits (248), Expect = 9e-19, Method: Composition-based stats. Identities = 48/107 (44%), Positives = 78/107 (72%), Gaps = 3/107 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58 M LF DF +R+K L++ID ++ ++ LD RI +E PRD +HG ++TNAAM+L++PLG Sbjct: 1 MNLFTDFEARIKTALEQIDL-VREKRSELDFGRITVEPPRDASHGDVATNAAMVLAKPLG 59 Query: 59 LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSI 105 +P +A++I+A++K D DV V +AG GFIN+ L+ Y +++L+S+ Sbjct: 60 SNPRALADVIIAKLKEDADVADVSVAGPGFINIRLAVGYWQRLLASM 106 >gi|325201801|gb|ADY97255.1| arginyl-tRNA synthetase [Neisseria meningitidis M01-240149] Length = 572 Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 124/588 (21%), Positives = 238/588 (40%), Gaps = 84/588 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P +L + + + ++ +G K V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRPEFLAQNIHA-ALNDARFGIAQTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 + F G V R+ ++ D G Q L + + + +DL + Y Sbjct: 144 RVSEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203 Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 AD + L +E L + K D S+ + D L ++ + E ++ Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323 ++ ++D+L ++G E D +++F G+ Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 + K G + Y + DLA +Y G D ++YV+ + + ++L + Sbjct: 303 VQKQGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPEN 360 Query: 381 INVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 + + +DG P K R+GD + L ++ E Sbjct: 361 VGAAFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGTDEAGK 418 Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 VG +V++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 419 IGKTVGIGAVKYADLSKNRTSDYVFDWDAMLS-FEGNTAPYLQYAYTRVQSVFRKAG--- 474 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 ++D V+ + E QL L ++ V+++ P+ LA YLY +A++F Sbjct: 475 ---EWDANAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLF 526 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + P L+ A+ RLQL + GL+++G++ Sbjct: 527 SRFY---EACPILKAEGASRNS----RLQLAKLTGDTLKQGLDLLGID 567 >gi|68475091|ref|XP_718431.1| likely Arginyl tRNA synthetase [Candida albicans SC5314] gi|68475632|ref|XP_718164.1| likely Arginyl tRNA synthetase [Candida albicans SC5314] gi|46439920|gb|EAK99232.1| likely Arginyl tRNA synthetase [Candida albicans SC5314] gi|46440196|gb|EAK99505.1| likely Arginyl tRNA synthetase [Candida albicans SC5314] Length = 643 Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 131/548 (23%), Positives = 223/548 (40%), Gaps = 83/548 (15%) Query: 88 FINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 F+ Y + + L ++ ++ +YG +G G K +EF S N P H GH R ++ Sbjct: 129 FLQFYFAKTLLYNLVIEDVLKRKSDYGYLPLGVGKKAIVEFSSPNIAKPFHAGHLRSTII 188 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPG 203 G +++L G++VTR Y+ D G Q LA+ F RY ++S L P + Sbjct: 189 GGFISNLYEKVGWDVTRINYLGDWGKQFGLLAVG-FERY-----GDESKLASDPINHLFE 242 Query: 204 VYLK---HVGKELAD---KYSSELLNFPE--EKWLPIVKDYSVQAMMKIIRD-DLKALNI 254 VY+K V KE ++ + +E ++ E EK + + + + + D D AL I Sbjct: 243 VYVKINQDVTKETSEATGETPAETIDASEQDEKKIQSSTNEEARRFFRRMEDGDESALKI 302 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-----EGILPPPKSKTTQK-------C 302 + R I +D R Y E +P K K K Sbjct: 303 ----------WARFRDLSIEKYVDTYGRLNIKYDVYSGESQVPQEKMKEATKLFEDKGLI 352 Query: 303 DMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360 D+DR L T + + L+ KSDG+ Y D+ +YE FD MIYV+ + Sbjct: 353 DIDRGAKLIDLTKFNKKLGKALVEKSDGTSLYLTRDVGEAIKRYETYKFDKMIYVIAAQQ 412 Query: 361 S---------------GYVKRLEAV----AAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401 + LE V +S +K + V L +++ ++ M M Sbjct: 413 DLHCAQFFEILKQMGFEWAHNLEHVNFGMVQGMSTRKGTV-VFLDNILQETKEKMHEVMQ 471 Query: 402 KRAGDFITLR---HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYA 457 K + + + D +G +V + K +F + ++ + P Y+QYA Sbjct: 472 KNEEKYAQIEDPDKIADLIGISAVMIQDMQSKRIHNYEFKWDRMTSFEGDTGP--YLQYA 529 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 ++R S+ R++ +L+ F V P S L LA+YP VI+ A E Sbjct: 530 HSRLCSMQRKSGISIEELEHANFDLLVEPCAS-------ALARTLAQYPDVIKKAVKGLE 582 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 P + YL+ + + + + +V + + + RL L A +IN+G+ ++ Sbjct: 583 PSTIVTYLFSVTHIVSQCYD-------ILWVSGQEKDVAIARLALYEAARQVINNGMTLL 635 Query: 578 GVESPNEM 585 G+ N M Sbjct: 636 GLTPVNRM 643 >gi|294614205|ref|ZP_06694124.1| arginyl-tRNA synthetase [Enterococcus faecium E1636] gi|291592864|gb|EFF24454.1| arginyl-tRNA synthetase [Enterococcus faecium E1636] Length = 563 Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 138/592 (23%), Positives = 258/592 (43%), Gaps = 94/592 (15%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P+ HG ++ A L++ P IA + +I + + + + G ++N + Sbjct: 27 LLENPKSAEHGDVAF-PAFSLAKVYRKAPQQIAADLAEKID-SANFEKIEVVGP-YLNFF 83 Query: 93 LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 ++ + +K+L ++V YG + IG V I+ S N P+ +GH R V+G+++ Sbjct: 84 MNKELISKKVLQTVVKEKEHYGDSNIGNQGTVPIDMSSPNIAKPISMGHLRSTVIGNSIG 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +M GY+ R ++ D G Q L ++ W ++A+ P +Y++ Sbjct: 144 FIMEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGTEEAVKAE----PINELLRLYVQF-- 197 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 E+A+ + LN W +++ +A + + RD+ +K N +D+ D Sbjct: 198 HEVAE--TEPELNEEARAWFKRLEEGDEEAIQLWQWFRDESMKEFNKIYDLLEVRFDSLN 255 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + +I+ L + + E K + D+ L P Sbjct: 256 GEAFYNDKMDEIVKLLEEKHLLNE-------DKGAEIVDLSAYDL------------NPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370 L KSDG+ Y DLA Y K Y+ F +YV+G++ S + K+L+AV Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FKQSLYVVGNEQSYHFKQLKAVLKEMGFDWS 354 Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 +S +K +I VLL E++ ++S++ D V + Sbjct: 355 DDMHHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAIQSAKEQISEKNPDLENKDAVAKQ 413 Query: 417 VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +V F L KN L FDF V+ + + P YVQY +AR S+ +A F Sbjct: 414 VGVGAVIFHDL--KNDRLNTFDFNLEEVVRFEGETGP--YVQYTHARAVSLLEKAG--FV 467 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 L+ + N D + +++ + +YP + +A EP +A + LA F+ Sbjct: 468 PLETADYALN--------DDTSWEVVKLVQKYPETVLSAGEKYEPSVIAKHAIKLAQAFN 519 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H + + A++ + RL LV+AV ++ L ++G+ +P++M Sbjct: 520 KYYAHTK-------ILADDEQ-KEARLALVYAVTVLLKEDLRLLGLHAPDKM 563 >gi|254577347|ref|XP_002494660.1| ZYRO0A06710p [Zygosaccharomyces rouxii] gi|238937549|emb|CAR25727.1| ZYRO0A06710p [Zygosaccharomyces rouxii] Length = 646 Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 130/583 (22%), Positives = 224/583 (38%), Gaps = 100/583 (17%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIE 111 L R G++P IA+ + + +V G F+ + +P +L ++ I+ + Sbjct: 114 LVRQKGINPREIAQEWAEKFPQGELISNVEANGP-FVQFFFNPQFLFHTVVPDILTRTED 172 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG + KV IEF S N P H GH R ++G L++L G+EV R Y+ D G Sbjct: 173 YGACKYVENKKVLIEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEKCGWEVIRMNYLGDWG 232 Query: 172 AQINTLAL--------------------SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 Q LA+ V+ R + + LPE + K Sbjct: 233 KQFGILAVGYERYGDEKKLAEDPIDHLFQVYVRVNKDIEQESDSLPESESTDGQSRAYFK 292 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 + D + + + + + L I K A LNI +D++ E + Sbjct: 293 RMEDGDPAAIKLWQKFRELSIEKYIGTYA----------RLNIHYDVYSGESQVSKESME 342 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGS 330 + D +G V+ +DR L T + + ++ KSDG+ Sbjct: 343 KALKLYD---EKGLVH----------------IDRGAKLIDMTRFNKKLGKVIVQKSDGT 383 Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSD---HSG------------YVKRLEAV---- 370 Y D+ +Y + FD MIYV+ S H+ + K L V Sbjct: 384 TLYLTRDIGAAIDRYNKYHFDKMIYVIASQQDLHTAQFFELLKQMGFEWAKNLHHVNFGM 443 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMML 427 +S +K + V L ++ +D M M K + + + V D VG +V + Sbjct: 444 VQGMSTRKGTV-VFLNNILEETKDNMHEVMKKNEVKYAQVENPDEVADLVGISAVMIQDM 502 Query: 428 WRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDI----FPDLDFDLFPR 482 K +F + ++ + P Y+QYA++R RS+ R DI + DF L Sbjct: 503 QGKRINNYEFKWERMLSFEGDTGP--YLQYAHSRLRSMERNVPDITVADMKNADFKLLQ- 559 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 + + + L+ L++YP V+ NA EP + YL+ L + Sbjct: 560 ---------EPAAIALVRLLSQYPDVLRNALKTHEPTTVVTYLFKLTHQVSSCYD----- 605 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +V ++L +RL L A ++ +G+ ++G+ M Sbjct: 606 --VLWVAGQTKELATVRLALYAATRQVLFNGMKLLGLTPVERM 646 >gi|191638719|ref|YP_001987885.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) (ArgRS) [Lactobacillus casei BL23] gi|239632092|ref|ZP_04675123.1| arginyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066773|ref|YP_003788796.1| arginyl-tRNA synthetase [Lactobacillus casei str. Zhang] gi|190713021|emb|CAQ67027.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) (ArgRS) [Lactobacillus casei BL23] gi|239526557|gb|EEQ65558.1| arginyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439180|gb|ADK18946.1| Arginyl-tRNA synthetase [Lactobacillus casei str. Zhang] gi|327382760|gb|AEA54236.1| Arginyl-tRNA synthetase 1 [Lactobacillus casei LC2W] gi|327385947|gb|AEA57421.1| Arginyl-tRNA synthetase 1 [Lactobacillus casei BD-II] Length = 560 Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 144/595 (24%), Positives = 250/595 (42%), Gaps = 99/595 (16%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 + +IE P+ G + L++ + P IA +V +I + P + V G G++N Sbjct: 25 KSLIETPKSSDLGDYAF-PTFSLAKIMHRAPKMIASDLVGQIDVTP-FEQVKAVG-GYVN 81 Query: 91 LYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 YL S+ +L I +G YG IG G V I+ S N PM +GH R V+G+ Sbjct: 82 FYLDKISFAHDVLKVIAQAGEHYGDANIGSGN-VPIDMSSPNIAKPMSMGHLRSTVIGNA 140 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKH 208 LA++++ GY + ++ D G Q L ++ W + A+ + P L H Sbjct: 141 LANILSKIGYTPIKINHLGDWGTQFGKLIVAYKKWGSEDAVKAD---------PIKNLLH 191 Query: 209 VGKELADKYSSE-LLNFPEEKWLPIVKDYSVQA--MMKIIRD-DLKALNIQHDIFISEDD 264 E +K + L+ W ++D +A + + R L N + I + D Sbjct: 192 YYVEFHEKAEANPELDDEARAWFKRLEDGDEEAIALWRWFRTVSLAEFNRIYKILGVDFD 251 Query: 265 FHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM-DRKQLLFRSTMVGDDV 320 + G+ + D++ L + + KT+Q ++ D ++ Sbjct: 252 SYNGEAFYNDKMADVVKRLEDKHLL----------KTSQGAEIVDLSAYNLNPALIK--- 298 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV--------- 370 KSDG+ Y DLA + E F +YV+G++ + ++L+AV Sbjct: 299 -----KSDGATLYMTRDLAAAIFRKEHYHFVQSLYVVGNEQREHFQQLKAVLLEMGYDWA 353 Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPI---KMSKRAGDFITLRHV 413 +S +K N++L E + RD + + +++++ D V Sbjct: 354 NDIHHIPFGLITANGKKLSTRKG--NIILLE--NVLRDAVGLAKQQIAEKHPDLPNADKV 409 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 EVG +V F L KN L +FDF V+ + + P YVQY AR SI R+A Sbjct: 410 AHEVGVGAVIFHDL--KNERLDNFDFNLEEVVRFEGETGP--YVQYTNARANSILRKAA- 464 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 I P P+ + D + ++ L +YP ++ A EP +A Y LA Sbjct: 465 IDP-----------APEVALSDPAAWDVLRALGDYPSMVLRAAKEYEPSVIAKYALRLAK 513 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ ++++ + V + +L RL +V A ++ + L ++GV +P EM Sbjct: 514 AFNKYYANVK-------VLVEDSELPA-RLAMVKATTQVLTNALQLLGVGAPEEM 560 >gi|116495209|ref|YP_806943.1| arginyl-tRNA synthetase [Lactobacillus casei ATCC 334] gi|116105359|gb|ABJ70501.1| arginyl-tRNA synthetase [Lactobacillus casei ATCC 334] Length = 560 Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 144/595 (24%), Positives = 250/595 (42%), Gaps = 99/595 (16%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 + +IE P+ G + L++ + P IA +V +I + P + V G G++N Sbjct: 25 KSLIETPKSSDLGDYAF-PTFSLAKIMHRAPKMIASDLVGQIDVTP-FEKVKAVG-GYVN 81 Query: 91 LYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 YL S+ +L I +G YG IG G V I+ S N PM +GH R V+G+ Sbjct: 82 FYLDKISFAHDVLKVIAQAGEHYGDANIGSGN-VPIDMSSPNIAKPMSMGHLRSTVIGNA 140 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKH 208 LA++++ GY + ++ D G Q L ++ W + A+ + P L H Sbjct: 141 LANILSKIGYTPIKINHLGDWGTQFGKLIVAYKKWGSEDAVKAD---------PIKNLLH 191 Query: 209 VGKELADKYSSE-LLNFPEEKWLPIVKDYSVQA--MMKIIRD-DLKALNIQHDIFISEDD 264 E +K + L+ W ++D +A + + R L N + I + D Sbjct: 192 YYVEFHEKAEANPELDDEARAWFKRLEDGDEEAIALWRWFRTVSLAEFNRIYKILGVDFD 251 Query: 265 FHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM-DRKQLLFRSTMVGDDV 320 + G+ + D++ L + + KT+Q ++ D ++ Sbjct: 252 SYNGEAFYNDKMADVVKRLEDKHLL----------KTSQGAEIVDLSAYNLNPALIK--- 298 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV--------- 370 KSDG+ Y DLA + E F +YV+G++ + ++L+AV Sbjct: 299 -----KSDGATLYMTRDLAAAIFRKEHYHFVQSLYVVGNEQREHFQQLKAVLLEMGYDWA 353 Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPI---KMSKRAGDFITLRHV 413 +S +K N++L E + RD + + +++++ D V Sbjct: 354 NDIHHIPFGLITANGKKLSTRKG--NIILLE--NVLRDAVGLAKQQIAEKHPDLPNADKV 409 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 EVG +V F L KN L +FDF V+ + + P YVQY AR SI R+A Sbjct: 410 AHEVGVGAVIFHDL--KNERLDNFDFNLEEVVRFEGETGP--YVQYTNARANSILRKAA- 464 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 I P P+ + D + ++ L +YP ++ A EP +A Y LA Sbjct: 465 IDP-----------APEVALSDPAAWDVLRALGDYPSMVLRAAKEYEPSVIAKYALRLAK 513 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ ++++ + V + +L RL +V A ++ + L ++GV +P EM Sbjct: 514 AFNKYYANVK-------VLVEDSELPA-RLAMVKATTQVLTNALQLLGVGAPEEM 560 >gi|301053706|ref|YP_003791917.1| arginyl-tRNA synthetase [Bacillus anthracis CI] gi|300375875|gb|ADK04779.1| arginyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI] Length = 562 Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 138/621 (22%), Positives = 254/621 (40%), Gaps = 101/621 (16%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ ++ L I +++ILD +IE P+ G + L++ P IA Sbjct: 2 DYKTQFAESLSNIFTNELTQQQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V G ++N++ + + +L +I+ EYG+N G V Sbjct: 59 KEVAEKLS-DPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNYFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA------ 178 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKW 176 Query: 179 --------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN- 223 ++ ++ + + +++ EG + K + E D+ + EL N Sbjct: 177 GNEAVVKEDPIRELFKLYVQFHEEVKDDEELEEEGR---AWFKKL--EEGDEEAVELWNW 231 Query: 224 FPEEKWLPIVKDYSV----------QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273 F E + Y + +A + +D + +HD+ + Sbjct: 232 FRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEESEG--------- 282 Query: 274 RDIIDNLARQGYVYEGILPP----PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 ++ NL +G +PP T D L+R G D ++ + Sbjct: 283 -ALVVNLEEEG------MPPCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQ 335 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHS--GYVKRLEAVAAAVSEKKAQINVLLCE 387 S + +F + G+ +V G +H G++ + +S +K ++ +LL E Sbjct: 336 SLHF----NQFFTVLKKLGY---TWVDGMEHVPFGFILK---DGKKMSTRKGRV-ILLEE 384 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKE 444 ++ D + ++ + V +VG+ +V F L KN + + +F +K Sbjct: 385 VLEEAIDLAKQNIEEKNPNLKQKEEVAKQVGAGAVIFHDL--KNERMHNIEFSLENMLKF 442 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 + + P YVQY +AR SI R+ F F L D ++ L + Sbjct: 443 EGETGP--YVQYTHARACSILRKESVEFETCTFTL-----------KDDYSWNIVKLLNK 489 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 +P VIE A EP ++ Y+ D+A +F+ ++ + +R + N K + RL LV+ Sbjct: 490 FPEVIEAACNKNEPSVISKYVLDVAQLFNKYYGN------VRILDENAEKDS--RLALVY 541 Query: 565 AVASIINSGLNIIGVESPNEM 585 AV ++ GL ++GVE+P EM Sbjct: 542 AVTVVLKEGLRLLGVEAPEEM 562 >gi|160935632|ref|ZP_02083007.1| hypothetical protein CLOBOL_00522 [Clostridium bolteae ATCC BAA-613] gi|158441376|gb|EDP19086.1| hypothetical protein CLOBOL_00522 [Clostridium bolteae ATCC BAA-613] Length = 595 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 137/610 (22%), Positives = 258/610 (42%), Gaps = 99/610 (16%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK----G 87 ++ RP C + N AM ++ P+ IA +V + + VF + G Sbjct: 29 VLSNRPDLCEY---QCNGAMAAAKVYKKKPIDIANQVVEHL-VSGGSHPVFSEAEAVMPG 84 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FINL LS ++L + + + + G K V +++ AN P+HVGH R A++G Sbjct: 85 FINLKLSEAFLAE-YTGFMAQSDKLGLEAPEKPETVIVDYGGANVAKPLHVGHLRAAIIG 143 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG---- 203 +++ + F G+ + + ++ D G Q+ + + R + +Y ++S EG +P Sbjct: 144 ESIKRMGRFLGHHMIGDVHLGDWGLQMGLIIEELRDRKPELVYFDES--FEGPFPQEAPF 201 Query: 204 -------VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS-----VQAMMKIIRDDLKA 251 +Y K AD+ E + + L + + Y+ Q +M + DLK Sbjct: 202 TISELEEIYPAASAKSKADEVFKERAH---QATLKLQRGYAPYRAIWQHIMAVSVADLKK 258 Query: 252 ----LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMD 305 LN++ D++ E D +P I D+I L +G +E G L ++ D D Sbjct: 259 NYANLNVEFDLWKGESD---AEPY-IGDMIQMLVDKGLAHESQGALVVDVAQ-----DTD 309 Query: 306 RKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHS 361 K++ P L KSDG+ Y +DLA + E+ F D IYV+ Sbjct: 310 TKEI------------PPCLVRKSDGASLYATSDLATI-VEREQDFKPDRYIYVVDKRQG 356 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSD 420 + +++ VA K ++ + +DG P K R G + L +++E+ Sbjct: 357 MHFEQVFRVAKKAGIVKEDTPMIFLGFGTMNGKDGKPFKT--REGGVMRLEKLIEEINEA 414 Query: 421 SVRFMMLWRKNSE-----------LLDFDFCKVKEQSKENPVF--------------YVQ 455 + +M R SE L + + Q+ ++ VF Y+ Sbjct: 415 VYQRIMENRTVSEDEARSTAAVVGLAALKYGDLSNQAAKDYVFDIERFTSFEGNTGPYIL 474 Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515 Y R +SI + ++ + D + ++ +SE L++ LA Y V+EN+ Sbjct: 475 YTIVRIKSIIAKYRENGGQVSQDAVEKKILACAG---SSEKALMLMLARYNEVLENSFAE 531 Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575 P+K+ Y+Y+LA+ F+ + + ++ + RK + + L+ ++ + + Sbjct: 532 TAPHKICQYIYELANAFNSFY----HDTKILAEEDEARKESY--IGLISLTRRVLEACIG 585 Query: 576 IIGVESPNEM 585 ++G+E+P M Sbjct: 586 LLGIEAPERM 595 >gi|238879357|gb|EEQ42995.1| arginyl-tRNA synthetase [Candida albicans WO-1] Length = 622 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 131/548 (23%), Positives = 223/548 (40%), Gaps = 83/548 (15%) Query: 88 FINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 F+ Y + + L ++ ++ +YG +G G K +EF S N P H GH R ++ Sbjct: 108 FLQFYFAKTLLYNLVIEDVLKRKSDYGYLPLGVGKKAIVEFSSPNIAKPFHAGHLRSTII 167 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPG 203 G +++L G++VTR Y+ D G Q LA+ F RY ++S L P + Sbjct: 168 GGFISNLYEKVGWDVTRINYLGDWGKQFGLLAVG-FERY-----GDESKLASDPINHLFE 221 Query: 204 VYLK---HVGKELAD---KYSSELLNFPE--EKWLPIVKDYSVQAMMKIIRD-DLKALNI 254 VY+K V KE ++ + +E ++ E EK + + + + + D D AL I Sbjct: 222 VYVKINQDVTKETSEATGETPAETIDASEQDEKKIQSSTNEEARRFFRRMEDGDESALKI 281 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-----EGILPPPKSKTTQK-------C 302 + R I +D R Y E +P K K K Sbjct: 282 ----------WARFRDLSIEKYVDTYGRLNIKYDVYSGESQVPQEKMKEATKLFEDKGLI 331 Query: 303 DMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360 D+DR L T + + L+ KSDG+ Y D+ +YE FD MIYV+ + Sbjct: 332 DIDRGAKLIDLTKFNKKLGKALVEKSDGTSLYLTRDVGEAIKRYETYKFDKMIYVIAAQQ 391 Query: 361 S---------------GYVKRLEAV----AAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401 + LE V +S +K + V L +++ ++ M M Sbjct: 392 DLHCAQFFEILKQMGFEWAHNLEHVNFGMVQGMSTRKGTV-VFLDNILQETKEKMHEVMQ 450 Query: 402 KRAGDFITLR---HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYA 457 K + + + D +G +V + K +F + ++ + P Y+QYA Sbjct: 451 KNEEKYAQIEDPDKIADLIGISAVMIQDMQSKRIHNYEFKWDRMTSFEGDTGP--YLQYA 508 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 ++R S+ R++ +L+ F V P S L LA+YP VI+ A E Sbjct: 509 HSRLCSMQRKSGISIEELEHANFDLLVEPCAS-------ALARTLAQYPDVIKKAVKGLE 561 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 P + YL+ + + + + +V + + + RL L A +IN+G+ ++ Sbjct: 562 PSTIVTYLFSVTHIVSQCYD-------ILWVSGQEKDVAIARLALYEAARQVINNGMTLL 614 Query: 578 GVESPNEM 585 G+ N M Sbjct: 615 GLTPVNRM 622 >gi|309803439|ref|ZP_07697533.1| arginine--tRNA ligase [Lactobacillus iners LactinV 11V1-d] gi|308164448|gb|EFO66701.1| arginine--tRNA ligase [Lactobacillus iners LactinV 11V1-d] Length = 558 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 142/601 (23%), Positives = 252/601 (41%), Gaps = 115/601 (19%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IERP++ G + L++ +P IA + A++ D + V + +IN Sbjct: 25 LIERPKNVKLGDYAF-PTFALAKIEHKNPAVIASELAAKLVNDNFAEIVAVGP--YINFA 81 Query: 93 LSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + L + L ++ +YG +G V I+ S N PM +GH R V+G+++A Sbjct: 82 IDHAKLVSVTLKKVLADQDKYGDQDTNQGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVY----- 205 ++ G+ + Y+ D G Q L + W ++A+ + YY + Sbjct: 141 KILQKIGFTPIKINYLGDYGTQFGKLITAYKLWGNEEAVKKDPITNLFHYYVKFHEEAEK 200 Query: 206 ---LKHVGK------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 L+ G+ E D + EL +W ++ S+Q +I ++ L + Sbjct: 201 DPKLEDEGRAWFKKLEEGDAEAVELW-----QWF---REVSLQEFNRIYKE----LGVTF 248 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D + E F+ ++ ++D L + ++E S+ Q D+D Sbjct: 249 DSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQVVDLD----------- 286 Query: 317 GDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372 DD + L LKSDG+ Y DLA Y K +Y+ F +YV G++ SG+ K+L+ V Sbjct: 287 -DDENPALILKSDGTSLYITRDLAAALYRKKEYD--FAMSLYVAGNEQSGHFKQLKQVLG 343 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL---------------------- 410 + Q ++ + ++G K+S R G+ + L Sbjct: 344 KMG-YDWQKDIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVKLALEQIEAKNPNL 400 Query: 411 ---RHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSI 464 V +VG +V F L KN L +FDF V+ + P YVQY AR +SI Sbjct: 401 ANKEQVAHQVGVGAVIFHDL--KNERLDNFDFNLNEVVRFEGDTGP--YVQYTNARAQSI 456 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R+A D L D + +A++P +I+ A EP +A Y Sbjct: 457 LRKANVAIDDTKLAL-----------SDDWAFAVAKDIADFPAIIQKAFEKFEPSVIAKY 505 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 +L+ F+ ++++ +R + ++ RL LV A + ++ L ++GV++P E Sbjct: 506 SLNLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESLRLLGVDAPKE 557 Query: 585 M 585 M Sbjct: 558 M 558 >gi|302553259|ref|ZP_07305601.1| arginyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736] gi|302470877|gb|EFL33970.1| arginyl-tRNA synthetase [Streptomyces viridochromogenes DSM 40736] Length = 585 Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 133/600 (22%), Positives = 232/600 (38%), Gaps = 114/600 (19%) Query: 45 LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104 N + L++ +P +A +V + + V ++G GF+N+ ++ + + L++ Sbjct: 41 FQANGILALAKKEKANPRELATQVVGNVVSGDVIKDVEVSGPGFLNITVADRAIIENLAA 100 Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164 G G L +++ N MHVGH R AV+GD L ++ F+G + Sbjct: 101 RHADGERLGVPLKENAGITVVDYAQPNVAKEMHVGHLRSAVIGDALRGMLDFTGEKTIGR 160 Query: 165 YYINDAGAQINTLALSVF------------------------WRYQQALYNNDSDLPEGY 200 ++I D G Q L +F ++ +AL++ D + E Sbjct: 161 HHIGDWGTQFGMLIQYLFEHPGELAPAADVDGEQAMSNLNRVYKASRALFDADEEFKERA 220 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 V V + DK + EL W V + V + D++ I+ + + Sbjct: 221 RKRV----VALQSGDKETLEL-------WQQFVDESKVYFYSVFEKLDME---IRDEEIV 266 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVY--EGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 E ++ G P R L +G EG L + F D Sbjct: 267 GESAYNEGMPETAR----LLEEKGVAVRSEGALV----------------VFFDEIRGKD 306 Query: 319 DVDRPLL--KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMG---SDHSGYVKRLEAVAA 372 D PL+ K+DG + Y A+DL + + ++ ++YV+ S H V A Sbjct: 307 DQPVPLIVQKADGGFGYAASDLTAIRNRVFDLKATTLLYVVDVRQSLHFRMVFETARRAG 366 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------- 416 +SE N+ + L DG P K R G+ + L ++DE Sbjct: 367 WLSEDVTAHNMGYGTV--LGADGKPFKT--REGETVRLEDLLDEAVQRAAEVVREKAQDL 422 Query: 417 -----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 VG +V++ L + FD ++ + + V Y+QYAYAR +SI Sbjct: 423 TEDEIQERAAQVGIGAVKYADLSTSPNRDYKFDLDQMVSLNGDTSV-YLQYAYARIQSIL 481 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 R+A + + V E E +E L +HL + + A P+KLA YL Sbjct: 482 RKAGET----------KAVAHPELELAPAERALGLHLDAFGDTVFEAAAEYAPHKLAAYL 531 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 Y LAS++ + + ++A + RL L A ++ G+ ++G+ +P + Sbjct: 532 YQLASLYTTFYD------KCPVLKAETPEQIENRLFLCDVTARTLHRGMGLLGIRTPERL 585 >gi|312870867|ref|ZP_07730972.1| arginine--tRNA ligase [Lactobacillus iners LEAF 3008A-a] gi|311093557|gb|EFQ51896.1| arginine--tRNA ligase [Lactobacillus iners LEAF 3008A-a] Length = 558 Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 141/599 (23%), Positives = 249/599 (41%), Gaps = 111/599 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IERP++ G + L++ +P IA + A++ D + V + +IN Sbjct: 25 LIERPKNVKLGDYAF-PTFALAKIEHKNPAVIASELTAKLVNDNFAEIVAVGP--YINFA 81 Query: 93 LSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + L + L ++ +YG +G V I+ S N PM +GH R V+G+++A Sbjct: 82 IDHAKLVSVTLKKVLADQDKYGDQDTNQGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVY----- 205 ++ G+ + Y+ D G Q L + W ++A+ + YY + Sbjct: 141 KILQKIGFTPIKINYLGDYGTQFGKLITAYKLWGNEEAVKKDPITNLFHYYVKFHEEAEK 200 Query: 206 ---LKHVGK------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 L+ G+ E D + EL +W ++ S+Q +I ++ L + Sbjct: 201 DPKLEDEGRAWFKKLEEGDAEAVELW-----QWF---REVSLQEFNRIYKE----LGVTF 248 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D + E F+ ++ ++D L + ++E S+ Q D+D Sbjct: 249 DSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQVVDLD----------- 286 Query: 317 GDDVDRPL-LKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374 DD + L LKSDG+ Y DL A K E F +YV G++ SG+ K+L+ V + Sbjct: 287 -DDENPALILKSDGTSLYITRDLAAALYRKKEYAFAMSLYVAGNEQSGHFKQLKQVLGKM 345 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL------------------------ 410 Q ++ + ++G K+S R G+ + L Sbjct: 346 G-YDWQKDIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVKLALEQIEAKNPNLAN 402 Query: 411 -RHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFR 466 V +VG +V F L KN L +FDF V+ + P YVQY AR +SI R Sbjct: 403 KEQVAHQVGVGAVIFHDL--KNERLDNFDFNLNEVVRFEGDTGP--YVQYTNARAQSILR 458 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 +A D L D + +A++P +I+ A EP +A Y Sbjct: 459 KANVAIDDTKLAL-----------SDDWAFAVAKDIADFPAIIQKAFEKFEPSVIAKYSL 507 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +L+ F+ ++++ +R + ++ RL LV A + ++ L ++GV++P EM Sbjct: 508 NLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESLRLLGVDAPKEM 558 >gi|309806624|ref|ZP_07700620.1| arginine--tRNA ligase [Lactobacillus iners LactinV 03V1-b] gi|308166929|gb|EFO69112.1| arginine--tRNA ligase [Lactobacillus iners LactinV 03V1-b] Length = 553 Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 141/599 (23%), Positives = 249/599 (41%), Gaps = 111/599 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IERP++ G + L++ +P IA + A++ D + V + +IN Sbjct: 20 LIERPKNVKLGDYAF-PTFALAKIEHKNPAVIASELTAKLVNDNFAEIVAVGP--YINFA 76 Query: 93 LSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + L + L ++ +YG +G V I+ S N PM +GH R V+G+++A Sbjct: 77 IDHAKLVSVTLKKVLADQDKYGDQDTNQGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 135 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVY----- 205 ++ G+ + Y+ D G Q L + W ++A+ + YY + Sbjct: 136 KILQKIGFTPIKINYLGDYGTQFGKLITAYKLWGNEEAVKKDPITNLFHYYVKFHEEAEK 195 Query: 206 ---LKHVGK------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 L+ G+ E D + EL +W ++ S+Q +I ++ L + Sbjct: 196 DPKLEDEGRAWFKKLEEGDAEAVELW-----QWF---REVSLQEFNRIYKE----LGVTF 243 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D + E F+ ++ ++D L + ++E S+ Q D+D Sbjct: 244 DSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQVVDLD----------- 281 Query: 317 GDDVDRPL-LKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374 DD + L LKSDG+ Y DL A K E F +YV G++ SG+ K+L+ V + Sbjct: 282 -DDENPALILKSDGTSLYITRDLAAALYRKKEYAFAMSLYVAGNEQSGHFKQLKQVLGKM 340 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL------------------------ 410 Q ++ + ++G K+S R G+ + L Sbjct: 341 G-YDWQKDIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVKLALEQIEAKNPNLAN 397 Query: 411 -RHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFR 466 V +VG +V F L KN L +FDF V+ + P YVQY AR +SI R Sbjct: 398 KEQVAHQVGVGAVIFHDL--KNERLDNFDFNLNEVVRFEGDTGP--YVQYTNARAQSILR 453 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 +A D L D + +A++P +I+ A EP +A Y Sbjct: 454 KANVAIDDTKLAL-----------SDDWAFAVAKDIADFPAIIQKAFEKFEPSVIAKYSL 502 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +L+ F+ ++++ +R + ++ RL LV A + ++ L ++GV++P EM Sbjct: 503 NLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESLRLLGVDAPKEM 553 >gi|312130430|ref|YP_003997770.1| arginyl-tRNA synthetase [Leadbetterella byssophila DSM 17132] gi|311906976|gb|ADQ17417.1| arginyl-tRNA synthetase [Leadbetterella byssophila DSM 17132] Length = 586 Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 141/632 (22%), Positives = 251/632 (39%), Gaps = 144/632 (22%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVAR-IKIDPDVDSVFIAGKGF 88 D++ ++ R GH T L + P I +L+ I+ P V S + +GF Sbjct: 23 DKVTLQPTRKDFEGHY-TYVFFGLVKLARKSPAEIGQLLGDYLIQNSPYVLSYTVV-QGF 80 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 +NL L ++ G++ G+N V +E+ S N P+H+GH R +G Sbjct: 81 LNLTLKDEAWIQVFR-----GVKEGQNPEASKGNVLVEYSSPNTNKPLHLGHLRNNFLGY 135 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL-- 206 ++A ++ +GYEVT+ +ND G I ++ + RY S L + G Y Sbjct: 136 SVAEILKEAGYEVTKACLVNDRGIHI-CKSMVAYQRYGNGETPASSGLKGDHLVGKYYVE 194 Query: 207 --KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 KH KE+ + + + +K PI+ V+A +++ Sbjct: 195 FDKHYKKEIEEWVAEGVSEEEAKKTAPIL----VEAQEMLVK------------------ 232 Query: 265 FHRGDPSPIRDIIDNLAR-QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV--- 320 + GD +II+ + G+VYEG K T + D+ + ++G D+ Sbjct: 233 WENGDA----EIIELWKKLNGWVYEGFDFTYK---TIGVNFDKTYYESDTYLLGKDIVEE 285 Query: 321 -------------------------DRPLLKSDGSYTYFAADLAYFKCKYERGF-DNMIY 354 + +L+ DG+ Y DL K++ + I+ Sbjct: 286 GLAKGVFYKKEDNSVWIDLTDEGLDHKLVLRGDGTSVYITQDLGTTDLKFQDFHSEKSIW 345 Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM-----------PIKMSKR 403 V+G++ + K L A+ L L R Y DG+ KM R Sbjct: 346 VVGNEQDYHFKVLFAI--------------LKRLGRPYADGLYHLSYGMVDLPSGKMKSR 391 Query: 404 AGDFI-----------TLRHVVDEVGS----DSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 G + T + + +E G + L+R + L + +K + K+ Sbjct: 392 EGTVVDADELVSDMIATSKSITEEKGKTEGFSEGQLEELYRMVA-LGALKYYLLKVEPKK 450 Query: 449 NPVF--------------YVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDT 493 +F ++QY +AR +SI R++ KD FP P ++ + + Sbjct: 451 RMLFNPEESIDFQGNTGPFIQYTHARIKSILRKSGKDQFP------MPADI----TNVNA 500 Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553 E+++I L ++ ++I+ A P +A Y+Y+LA F+ +S R + N Sbjct: 501 EEIEVIFLLKDFRKIIDAAAAEYSPAVIANYVYELAKTFNVFYS------RHSVLNEENE 554 Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L RL L+ VA +I G+ ++G+E P +M Sbjct: 555 VLKNFRLSLIEQVAEVIKKGMKLLGIEVPEKM 586 >gi|262276201|ref|ZP_06054010.1| arginyl-tRNA synthetase [Grimontia hollisae CIP 101886] gi|262220009|gb|EEY71325.1| arginyl-tRNA synthetase [Grimontia hollisae CIP 101886] Length = 576 Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 135/603 (22%), Positives = 236/603 (39%), Gaps = 123/603 (20%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG +P A+ ++ +++D IAG GFIN++LS +L + Sbjct: 37 GDYQANGIMGVAKKLGCNPREFAQKVLDVLELDGMASKTEIAGPGFINIFLSSEWLAEQA 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + + S R + + K NI ++ + N MHVGH R ++GD + + F G+ Sbjct: 97 DAALASD----RLGVAEAEKQNIVVDYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHN 152 Query: 161 VTREYYINDAGAQINTLALSV-------------------FWRYQQALYNNDSDLPEGYY 201 V R ++ D G Q L ++ F+R + LY+ D + + Sbjct: 153 VIRANHLGDWGTQFGMLIANLERHEAQGGDISMDLSDIEGFYRESKKLYDEDEEFAKTAR 212 Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 V G E + +EKW +VK Q R LN+ ++ Sbjct: 213 NYVVRLQSGDE-----------YCKEKWQQLVKITLEQNQRNYDR-----LNVS----LT 252 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF---RSTMVGD 318 + D S D++ GI+ K+K D D ++F G+ Sbjct: 253 DKDVM--GESMYNDML----------AGIVEDLKAKGLAVED-DGAMVVFLDEYKNKDGE 299 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAV 370 + + K DG + Y D+A K +YE D ++Y + S + V++ V Sbjct: 300 PMGVIIQKRDGGFLYTTTDIACAKYRYETFNADRVLYFIDSRQHQHLMQAWTIVRKAGYV 359 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430 +S + ++L +DG P K RAG + L ++DE + + + ++ K Sbjct: 360 PETMSLEHHAFGMMLG------KDGKPFKT--RAGGTVRLADLLDEAEARANK--LIEEK 409 Query: 431 NSEL-----------LDFDFCKVKEQSKE-----------------NPVFYVQYAYARCR 462 N EL + K + SK N Y+QYAY R Sbjct: 410 NPELSAEEKANIATTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRVA 469 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 SIF +A +D D +I E + E L+ L ++ ++ +P+ + Sbjct: 470 SIFNKA-----GIDADNIEGKIIVAEDK----EKALVSKLLQFEEAVDGVAREGQPHIMC 520 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 YL++LA F + E + + ++ RL+L A I GL ++G+++ Sbjct: 521 GYLFELAGTFSSFY----EACPILNAEGETKQ---SRLKLAALTAKTIKQGLELLGIKTL 573 Query: 583 NEM 585 M Sbjct: 574 ERM 576 >gi|69246787|ref|ZP_00604116.1| Arginyl-tRNA synthetase, class Ic [Enterococcus faecium DO] gi|257878540|ref|ZP_05658193.1| arginyl-tRNA synthetase [Enterococcus faecium 1,230,933] gi|257883175|ref|ZP_05662828.1| arginyl-tRNA synthetase [Enterococcus faecium 1,231,502] gi|257889263|ref|ZP_05668916.1| arginyl-tRNA synthetase [Enterococcus faecium 1,231,410] gi|260560126|ref|ZP_05832304.1| arginyl-tRNA synthetase [Enterococcus faecium C68] gi|293560155|ref|ZP_06676658.1| arginyl-tRNA synthetase [Enterococcus faecium E1162] gi|294620321|ref|ZP_06699637.1| arginyl-tRNA synthetase [Enterococcus faecium E1679] gi|314937490|ref|ZP_07844823.1| arginyl-tRNA synthetase [Enterococcus faecium TX0133a04] gi|314942149|ref|ZP_07849003.1| arginyl-tRNA synthetase [Enterococcus faecium TX0133C] gi|314947511|ref|ZP_07850926.1| arginyl-tRNA synthetase [Enterococcus faecium TX0082] gi|314951498|ref|ZP_07854547.1| arginyl-tRNA synthetase [Enterococcus faecium TX0133A] gi|314992588|ref|ZP_07858006.1| arginyl-tRNA synthetase [Enterococcus faecium TX0133B] gi|314995477|ref|ZP_07860577.1| arginyl-tRNA synthetase [Enterococcus faecium TX0133a01] gi|68195078|gb|EAN09539.1| Arginyl-tRNA synthetase, class Ic [Enterococcus faecium DO] gi|257812768|gb|EEV41526.1| arginyl-tRNA synthetase [Enterococcus faecium 1,230,933] gi|257818833|gb|EEV46161.1| arginyl-tRNA synthetase [Enterococcus faecium 1,231,502] gi|257825623|gb|EEV52249.1| arginyl-tRNA synthetase [Enterococcus faecium 1,231,410] gi|260073961|gb|EEW62285.1| arginyl-tRNA synthetase [Enterococcus faecium C68] gi|291593433|gb|EFF24991.1| arginyl-tRNA synthetase [Enterococcus faecium E1679] gi|291605888|gb|EFF35319.1| arginyl-tRNA synthetase [Enterococcus faecium E1162] gi|313590311|gb|EFR69156.1| arginyl-tRNA synthetase [Enterococcus faecium TX0133a01] gi|313592880|gb|EFR71725.1| arginyl-tRNA synthetase [Enterococcus faecium TX0133B] gi|313596338|gb|EFR75183.1| arginyl-tRNA synthetase [Enterococcus faecium TX0133A] gi|313599072|gb|EFR77917.1| arginyl-tRNA synthetase [Enterococcus faecium TX0133C] gi|313643131|gb|EFS07711.1| arginyl-tRNA synthetase [Enterococcus faecium TX0133a04] gi|313646061|gb|EFS10641.1| arginyl-tRNA synthetase [Enterococcus faecium TX0082] Length = 563 Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 137/596 (22%), Positives = 257/596 (43%), Gaps = 102/596 (17%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P+ HG ++ A L++ P IA + +I + + + + G ++N + Sbjct: 27 LLENPKSAEHGDVAF-PAFSLAKVYRKAPQQIAADLAEKID-SANFEKIEVVGP-YLNFF 83 Query: 93 LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 ++ + +K+L ++V YG + IG V I+ S N P+ +GH R V+G+++ Sbjct: 84 MNKELISKKVLQTVVKEKEHYGDSNIGNQGTVPIDMSSPNIAKPISMGHLRSTVIGNSIG 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +M GY+ R ++ D G Q L ++ W ++A+ P +Y++ Sbjct: 144 FIMEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGTEEAVKAE----PINELLRLYVQF-- 197 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 E+A+ + LN W +++ +A + + RD+ +K N +D+ D Sbjct: 198 HEVAE--TEPELNEEARAWFKRLEEGDKEAIQLWQWFRDESMKEFNKIYDLLEVRFDSLN 255 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + +I+ L + + E K + D+ L P Sbjct: 256 GEAFYNDKMDEIVKLLEEKHLLNE-------DKGAEIVDLSAYDL------------NPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370 L KSDG+ Y DLA Y K Y+ F +YV+G++ S + K+L+AV Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FKQSLYVVGNEQSYHFKQLKAVLKEMGFDWS 354 Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 +S +K +I VLL E++ ++S++ D V + Sbjct: 355 DDMHHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAIQSAKEQISEKNPDLENKDAVAKQ 413 Query: 417 VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +V F L KN L FDF V+ + + P YVQY +AR S+ +A Sbjct: 414 VGVGAVIFHDL--KNDRLNTFDFNLEEVVRFEGETGP--YVQYTHARAVSLLEKA----- 464 Query: 474 DLDFDLFPRNVIPQESE----FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 +P E+ D + +++ + +YP + +A EP +A + LA Sbjct: 465 ---------GFVPSETADYALNDDTSWEVVKLVQKYPETVLSAGEKYEPSVIAKHAIKLA 515 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ +++H + + A++ + RL LV+AV ++ L ++G+ +P++M Sbjct: 516 QAFNKYYAHTK-------ILADDEQ-KEARLALVYAVTVLLKEDLRLLGLHAPDKM 563 >gi|293553971|ref|ZP_06674575.1| arginyl-tRNA synthetase [Enterococcus faecium E1039] gi|291601897|gb|EFF32145.1| arginyl-tRNA synthetase [Enterococcus faecium E1039] Length = 563 Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 137/596 (22%), Positives = 257/596 (43%), Gaps = 102/596 (17%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P+ HG ++ A L++ P IA + +I + + + + G ++N + Sbjct: 27 LLENPKSAEHGDVAF-PAFSLAKVYRKAPQQIAADLAEKID-SANFEKIEVVGP-YLNFF 83 Query: 93 LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 ++ + +K+L ++V YG + IG V I+ S N P+ +GH R V+G+++ Sbjct: 84 MNKELISKKVLQTVVKEKEHYGDSNIGNQGTVPIDMSSPNIAKPISMGHLRSTVIGNSIG 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +M GY+ R ++ D G Q L ++ W ++A+ P +Y++ Sbjct: 144 FIMEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGTEEAVKAE----PINELLRLYVQF-- 197 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 E+A+ + LN W +++ +A + + RD+ +K N +D+ D Sbjct: 198 HEVAE--TEPELNEEARAWFKRLEEGDEEAIQLWQWFRDESMKEFNKIYDLLEVRFDSLN 255 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + +I+ L + + E K + D+ L P Sbjct: 256 GEAFYNDKMDEIVKLLEEKHLLNE-------DKGAEIVDLSAYDL------------NPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370 L KSDG+ Y DLA Y K Y+ F +YV+G++ S + K+L+AV Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FKQSLYVVGNEQSYHFKQLKAVLKEMGFDWS 354 Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 +S +K +I VLL E++ ++S++ D V + Sbjct: 355 DDMHHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAIQSAKEQISEKNPDLENKDAVAKQ 413 Query: 417 VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +V F L KN L FDF V+ + + P YVQY +AR S+ +A Sbjct: 414 VGVGAVIFHDL--KNDRLNTFDFNLEEVVRFEGETGP--YVQYTHARAVSLLEKA----- 464 Query: 474 DLDFDLFPRNVIPQESE----FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 +P E+ D + +++ + +YP + +A EP +A + LA Sbjct: 465 ---------GFVPSETADYALNDDTSWEVVKLVQKYPETVLSAGEKYEPSVIAKHAIKLA 515 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ +++H + + A++ + RL LV+AV ++ L ++G+ +P++M Sbjct: 516 QAFNKYYAHTK-------ILADDEQ-KEARLALVYAVTVLLKEDLRLLGLHAPDKM 563 >gi|261208154|ref|ZP_05922828.1| arginyl-tRNA synthetase [Enterococcus faecium TC 6] gi|289566203|ref|ZP_06446636.1| arginyl-tRNA synthetase [Enterococcus faecium D344SRF] gi|260077588|gb|EEW65305.1| arginyl-tRNA synthetase [Enterococcus faecium TC 6] gi|289161981|gb|EFD09848.1| arginyl-tRNA synthetase [Enterococcus faecium D344SRF] Length = 563 Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 137/596 (22%), Positives = 257/596 (43%), Gaps = 102/596 (17%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P+ HG ++ A L++ P IA + +I + + + + G ++N + Sbjct: 27 LLENPKSAEHGDVAF-PAFSLAKVYRKAPQQIAADLAEKID-SANFEKIEVVGP-YLNFF 83 Query: 93 LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 ++ + +K+L ++V YG + IG V I+ S N P+ +GH R V+G+++ Sbjct: 84 MNKELISKKVLQTVVKEKEHYGDSNIGNQGTVPIDMSSPNIAKPISMGHLRSTVIGNSIG 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +M GY+ R ++ D G Q L ++ W ++A+ P +Y++ Sbjct: 144 FIMEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGTEEAVKAE----PINELLRLYVQF-- 197 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 E+A+ + LN W +++ +A + + RD+ +K N +D+ D Sbjct: 198 HEVAE--TEPELNEEARAWFKRLEEGDEEAIQLWQWFRDESMKEFNKIYDLLEVRFDSLN 255 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + +I+ L + + E K + D+ L P Sbjct: 256 GEAFYNDKMDEIVKLLEEKHLLNE-------DKGAEIVDLSAYDL------------NPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370 L KSDG+ Y DLA Y K Y+ F +YV+G++ S + K+L+AV Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FKQSLYVVGNEQSYHFKQLKAVLKEMGFDWS 354 Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 +S +K +I VLL E++ ++S++ D V + Sbjct: 355 DDMHHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAIQSAKEQISEKNPDLENKDAVAKQ 413 Query: 417 VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +V F L KN L FDF V+ + + P YVQY +AR S+ +A Sbjct: 414 VGVGAVIFHDL--KNDRLNTFDFNLEEVVRFEGETGP--YVQYTHARAVSLLEKA----- 464 Query: 474 DLDFDLFPRNVIPQESE----FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 +P E+ D + +++ + +YP + +A EP +A + LA Sbjct: 465 ---------GFVPSETADYALNDDTSWEVVKLVQKYPETVLSAGEKYEPSVIAKHAIKLA 515 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ +++H + + A++ + RL LV+AV ++ L ++G+ +P++M Sbjct: 516 QAFNKYYAHTK-------ILADDEQ-KEARLALVYAVTVLLKEDLRLLGLHAPDKM 563 >gi|325479660|gb|EGC82752.1| arginine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13] Length = 565 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 141/595 (23%), Positives = 241/595 (40%), Gaps = 98/595 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID--PDVDSVFIAGKGFIN 90 +IE P G S L++ + +P IA+ + ++I+ V+S+ ++N Sbjct: 27 LIEIPPQDNMGDFSF-PCFTLAKTMRKNPAIIAKDLAETLEIEGISKVESL----NAYLN 81 Query: 91 LYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 +L + IL+ I+ +YG++ IG+G ++F S N P H+GH R V+GD Sbjct: 82 FFLDRDKFETGILNEILEKKEDYGKSNIGEGKTRVLDFSSVNIAKPFHIGHIRSTVIGDA 141 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 L ++ F GYE YI D G Q T+ + L+ +D L E P Sbjct: 142 LRNIQEFLGYETVASNYIGDYGTQFGTMIAAY------KLWGDDDKLREN--P------- 186 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD------IFISED 263 ELLN KD + MM+ R + K L + + E Sbjct: 187 --------IKELLNLYVRYNDEASKD---EKMMENARKEFKNLESGEEEAVRLWSWFKEI 235 Query: 264 DFHRGDPS-PIRDI-IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST----MVG 317 F D + DI DN + Y E I + ++ K LL S + Sbjct: 236 SFSEFDRVYKLLDIDFDNYNGESYHSEFIPAVIE-------ELKEKNLLVESEGAYIIDL 288 Query: 318 DDVDRP---LLKSDGSYTYFAADLAY-FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA-- 371 D D P ++KS+GS Y D+A K FD +YV+ + + + ++L+A+ Sbjct: 289 SDYDLPPSIIIKSNGSSAYITRDIATAINRKKVYDFDENLYVVATQQNLHFQQLKAILEK 348 Query: 372 ---------------------AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 +S +K Q+ V L +++ D M R + Sbjct: 349 MGYDFYKDCIHIPFGMVSLKDQTLSTRKGQV-VFLEDVLNKAIDKTREIMEDRDSQIEDV 407 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 VG +V+F L+ + FD+ +V E YVQY YAR +S+ R+A Sbjct: 408 EETSRIVGIGAVKFQELYNNRIKDYVFDWDEVLNFDGETGP-YVQYTYARAKSVLRKAD- 465 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 F + F + I + EF L+ LA + V+ A EP + + ++A Sbjct: 466 -FSETKTKDFTK--ISSDEEF-----ALVKSLANFKDVVIKACEKYEPSLITRHTTEIAK 517 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ ++ + + ++ +L RL L +A + +I + L ++G+++ +M Sbjct: 518 NFNKFYNACQ-------INVDDERLKEERLALTYATSIVIKTALGLLGIKTVEQM 565 >gi|225075056|ref|ZP_03718255.1| hypothetical protein NEIFLAOT_00055 [Neisseria flavescens NRL30031/H210] gi|224953540|gb|EEG34749.1| hypothetical protein NEIFLAOT_00055 [Neisseria flavescens NRL30031/H210] Length = 572 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 125/590 (21%), Positives = 238/590 (40%), Gaps = 78/590 (13%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ G N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQAAKNPDFGDFQINGVMGAAKKAKQNPRELAQKVAEALADNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P +L + + + ++ +G K V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRPEFLAQNIQT-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ F G V R+ ++ D G Q L + + + +DL + Y Sbjct: 144 RVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203 Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 AD + L +E L + K D S+ + D L ++ + E ++ Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 ++ ++D+L ++G E +K + K+ G+ + K Sbjct: 262 ----DDLQPVVDDLVQKGLAVE----DDGAKVVFLDEFKNKE--------GEPAAFIVQK 305 Query: 327 SDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383 G + Y + DLA +Y G D ++YV+ + + ++L + + Sbjct: 306 QGGGFLYASTDLACL--RYRVGTLHADRLLYVVDHRQALHFEQLFTTSRKAGYLPENVGA 363 Query: 384 LLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416 + +DG P K R+GD + L ++ E Sbjct: 364 AFVGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGK 421 Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 VG +V++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 422 TVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG------ 474 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 ++D V+ + E QL L ++ V+++ P+ LA YLY +A++F Sbjct: 475 EWDATAPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATLFSRF 529 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P L+ A RLQL + GL ++G++ N M Sbjct: 530 Y---EACPILKSEGATRNS----RLQLAKLTGDTLKQGLELLGIDVLNVM 572 >gi|259501427|ref|ZP_05744329.1| arginine-tRNA ligase [Lactobacillus iners DSM 13335] gi|302190852|ref|ZP_07267106.1| arginyl-tRNA synthetase [Lactobacillus iners AB-1] gi|325911634|ref|ZP_08174042.1| arginine--tRNA ligase [Lactobacillus iners UPII 143-D] gi|329919661|ref|ZP_08276639.1| arginine--tRNA ligase [Lactobacillus iners SPIN 1401G] gi|259167176|gb|EEW51671.1| arginine-tRNA ligase [Lactobacillus iners DSM 13335] gi|325476620|gb|EGC79778.1| arginine--tRNA ligase [Lactobacillus iners UPII 143-D] gi|328937313|gb|EGG33737.1| arginine--tRNA ligase [Lactobacillus iners SPIN 1401G] Length = 558 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 141/599 (23%), Positives = 249/599 (41%), Gaps = 111/599 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IERP++ G + L++ +P IA + A++ D + V + +IN Sbjct: 25 LIERPKNVKLGDYAF-PTFALAKIEHKNPAVIASELTAKLVNDNFAEIVAVGP--YINFA 81 Query: 93 LSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + L + L ++ +YG +G V I+ S N PM +GH R V+G+++A Sbjct: 82 IDHAKLVSVTLKKVLADQDKYGDQDTNQGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVY----- 205 ++ G+ + Y+ D G Q L + W ++A+ + YY + Sbjct: 141 KILQKIGFTPIKINYLGDYGTQFGKLITAYKLWGNEEAVKKDPITNLFHYYVKFHEEAEK 200 Query: 206 ---LKHVGK------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 L+ G+ E D + EL +W ++ S+Q +I ++ L + Sbjct: 201 DPKLEDEGRAWFKKLEEGDAEAVELW-----QWF---REVSLQEFNRIYKE----LGVTF 248 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D + E F+ ++ ++D L + ++E S+ Q D+D Sbjct: 249 DSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQVVDLD----------- 286 Query: 317 GDDVDRPL-LKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374 DD + L LKSDG+ Y DL A K E F +YV G++ SG+ K+L+ V + Sbjct: 287 -DDENPALILKSDGTSLYITRDLAAALYRKKEYNFAMSLYVAGNEQSGHFKQLKQVLGKM 345 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL------------------------ 410 Q ++ + ++G K+S R G+ + L Sbjct: 346 G-YDWQKDIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVKLALEQIEAKNPNLAN 402 Query: 411 -RHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFR 466 V +VG +V F L KN L +FDF V+ + P YVQY AR +SI R Sbjct: 403 KEQVAHQVGVGAVIFHDL--KNERLDNFDFNLNEVVRFEGDTGP--YVQYTNARAQSILR 458 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 +A D L D + +A++P +I+ A EP +A Y Sbjct: 459 KANVAIDDTKLAL-----------SDDWAFAVAKDIADFPAIIQKAFEKFEPSVIAKYSL 507 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +L+ F+ ++++ +R + ++ RL LV A + ++ L ++GV++P EM Sbjct: 508 NLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESLRLLGVDAPKEM 558 >gi|296424987|ref|XP_002842025.1| hypothetical protein [Tuber melanosporum Mel28] gi|295638282|emb|CAZ86216.1| unnamed protein product [Tuber melanosporum] Length = 633 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 138/588 (23%), Positives = 237/588 (40%), Gaps = 104/588 (17%) Query: 51 MILSRPL----GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSI 105 +IL+ P G +P + + + +P V S AG F+ Y L K +LSSI Sbjct: 85 LILAAPRLRIPGKNPSELTKEWAEKFPENPYVRSPTAAGT-FLQFYFKKDVLSKLVLSSI 143 Query: 106 VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREY 165 + YG GKG +V +EF S N P H GH R ++G L++L G++V R Sbjct: 144 LSRKSAYGPIDTGKGKRVIVEFSSPNIAKPFHAGHLRSTIIGGFLSNLYESCGWDVIRMN 203 Query: 166 YINDAGAQINTLALSV--FWRYQQALYNNDSDLPEGYYPGVYLKHVGKE-----LADKYS 218 Y+ D G Q L + F ++ L + + L E Y + KE A+K Sbjct: 204 YLGDWGKQFGILGVGYKRFGSEEKLLEDPINHLFEVYVAINKVVEQEKEAEKNKAAEKGE 263 Query: 219 SELLNFP---------------EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 ++ N P E+ + + K + ++ K + LNI +D++ E Sbjct: 264 KQISNGPTDQEALEFFFKMEHGSEECIAMWKRFRELSIEK-YKATYSRLNISYDVYSGES 322 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 + +++ R G + GI S++ +D K + +G V Sbjct: 323 QVSK----------ESMERAGEMMREMGI----SSESDGAIVVDFKP---HAKKLGKAV- 364 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---------- 370 + K DG+ Y D+ +YE+ FD MIYV+ ++++L + Sbjct: 365 --VQKKDGTTLYLTRDIGAAMERYEKYKFDKMIYVVACQQDLHLQQLFMILKLLKLDWAD 422 Query: 371 ---------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVG 418 +S ++ + V L +++ RD M M K + + V D VG Sbjct: 423 RLTHVNFGMVLGMSSRRGTV-VFLDDILADARDKMHEVMRKNEEKYKQVEDPEMVADVVG 481 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDL-- 475 +V + K FD ++ + P Y+QYA++R SI R++ P+L Sbjct: 482 RTAVMIQDMSGKRINNYTFDMARMTSFEGDTGP--YLQYAHSRLCSIQRKSGIPIPELLN 539 Query: 476 -DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 DF L + + LI LA+YP V++N EP + YL+ + + Sbjct: 540 ADFSLLTED----------HAINLIRCLAQYPDVLQNTLKTLEPTTVVTYLFKMTHLLSS 589 Query: 535 HWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 + R E PR L+ R+ L + ++N+G+ ++G+ Sbjct: 590 SYDVLRVIGEEPR----------LSAARMALYESARQVLNNGMRLLGL 627 >gi|293567417|ref|ZP_06678764.1| arginyl-tRNA synthetase [Enterococcus faecium E1071] gi|294620748|ref|ZP_06699955.1| arginyl-tRNA synthetase [Enterococcus faecium U0317] gi|291589814|gb|EFF21615.1| arginyl-tRNA synthetase [Enterococcus faecium E1071] gi|291599728|gb|EFF30738.1| arginyl-tRNA synthetase [Enterococcus faecium U0317] Length = 563 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 137/596 (22%), Positives = 257/596 (43%), Gaps = 102/596 (17%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P+ HG ++ A L++ P IA + +I + + + + G ++N + Sbjct: 27 LLENPKSAEHGDVAF-PAFSLAKVYRKAPQQIAADLAEKID-SANFEKIEVVGP-YLNFF 83 Query: 93 LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 ++ + +K+L ++V YG + IG V I+ S N P+ +GH R V+G+++ Sbjct: 84 MNKELISKKVLQTVVKEKEHYGDSNIGNQGTVPIDMSSPNIAKPISMGHLRSTVIGNSIG 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +M GY+ R ++ D G Q L ++ W ++A+ P +Y++ Sbjct: 144 FIMEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGTEEAVKAE----PINELLRLYVQF-- 197 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 E+A+ + LN W +++ +A + + RD+ +K N +D+ D Sbjct: 198 HEVAE--TEPELNEEARAWFKRLEEGDEEAIQLWQWFRDESMKEFNKIYDLLEVRFDSLN 255 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + +I+ L + + E K + D+ L P Sbjct: 256 GEAFYNDKMDEIVKLLEEKHLLNE-------DKGAEIVDLSAYDL------------NPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370 L KSDG+ Y DLA Y K Y+ F +YV+G++ S + K+L+AV Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FKQSLYVVGNEQSYHFKQLKAVLKEMGFDWS 354 Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 +S +K +I VLL E++ ++S++ D V + Sbjct: 355 DDMRHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAIQSAKEQISEKNPDLENKDAVAKQ 413 Query: 417 VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +V F L KN L FDF V+ + + P YVQY +AR S+ +A Sbjct: 414 VGVGAVIFHDL--KNDRLNTFDFNLEEVVRFEGETGP--YVQYTHARAVSLLEKA----- 464 Query: 474 DLDFDLFPRNVIPQESE----FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 +P E+ D + +++ + +YP + +A EP +A + LA Sbjct: 465 ---------GFVPSETADYALNDDTSWEVVKLVQKYPETVLSAGEKYEPSVIAKHAIKLA 515 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ +++H + + A++ + RL LV+AV ++ L ++G+ +P++M Sbjct: 516 QAFNKYYAHTK-------ILADDEQ-KEARLALVYAVTVLLKEDLRLLGLHAPDKM 563 >gi|256545516|ref|ZP_05472876.1| arginine--tRNA ligase [Anaerococcus vaginalis ATCC 51170] gi|256398727|gb|EEU12344.1| arginine--tRNA ligase [Anaerococcus vaginalis ATCC 51170] Length = 566 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 134/584 (22%), Positives = 252/584 (43%), Gaps = 114/584 (19%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIE 111 L++ + +P IAE + + ++ID V+ + + ++N YL + +++ ++ + Sbjct: 46 LAKTMRKNPKLIAEEVASSLEIDG-VEKI-VNENAYVNFYLDRQKVTNDVINEVIEKEDD 103 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG++ +GKG +EF S N P H+GH R V+GD + ++ + GY VT YI D G Sbjct: 104 YGKSDMGKGINELVEFSSVNIAKPFHIGHIRSTVIGDVIRNIYEYLGYNVTASNYIGDYG 163 Query: 172 AQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG-----KELADKYSSELLNFP 225 Q + A W ++A+ D D P +Y+++ +E +K E N Sbjct: 164 TQFGVMIAAYKLWGDKEAI---DKD-PINELLNLYVRYTKEEEDNEEYQEKARQEFKNLE 219 Query: 226 --EEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN- 279 EE+ + + KD S++ ++ L+I++D + E + P+ + ++ + Sbjct: 220 DGEEEAMRLWQWFKDLSLREFDRV----YGMLDIKYDNYHGESYHSQWMPAALEELKEKN 275 Query: 280 -LARQGYVY-----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333 L Y E LPP +L +S +GS Y Sbjct: 276 LLVESDGAYIVDLSEFNLPPS--------------MLIKS--------------NGSSAY 307 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE--LVR 390 D+A ++ G D IY++GS + ++L+ + + + VL + +V Sbjct: 308 ITRDVATALYRHRTYGLDKNIYIVGSQQKLHFQQLKKILYLMGHEDVSEEVLHVQFGMVS 367 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE-------------------------VGSDSVRFM 425 L +D + +S R G + L V+++ VG +V+F Sbjct: 368 L-KDQV---LSTRKGHVVFLEDVLNKTIEKTYSIMKDRDNQIENLDEAAKIVGIGAVKFQ 423 Query: 426 MLWRKNSELLD--FDFCKVKE-QSKENPVFYVQYAYARCRSIFRQA-KDIFPDLDFDLFP 481 L+ NS + D FD+ ++ + + P YV Y YAR +S+ R+A K+ F ++F+ Sbjct: 424 ELY--NSRIKDYVFDWDELLNFEGETGP--YVHYTYARAKSVLRKAGKEEFGQMNFEKLN 479 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + E LI L + I A EP +A + ++A F+ ++ + Sbjct: 480 TD----------EEYSLIKALESFQDAIILAKNRLEPSVVARKVMEIAQKFNKFYNSTQ- 528 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++ KL RL L A + +I +GL I+G+++ +M Sbjct: 529 ------ILVDDEKLKEERLALTKATSIVIKNGLGILGIKTVEQM 566 >gi|116074027|ref|ZP_01471289.1| arginyl-tRNA synthetase [Synechococcus sp. RS9916] gi|116069332|gb|EAU75084.1| arginyl-tRNA synthetase [Synechococcus sp. RS9916] Length = 595 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 142/599 (23%), Positives = 241/599 (40%), Gaps = 104/599 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98 G N A+ L++PL P IA IV +++ DP + IAG GFINL + P L Sbjct: 45 GDFQANGALPLAKPLKQAPRQIATAIVEQLQADPAFTDLCLEPQIAGPGFINLTIRPEQL 104 Query: 99 RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158 ++S + G + V ++F S N MHVGH R ++GD+LA ++ F G Sbjct: 105 AAEVAS-RLGDPRLGVPAVENAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRG 163 Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKY 217 + V R ++ D G Q L + +AL D+ DL +L Y Sbjct: 164 HPVLRLNHVGDWGTQFGMLITHLKQVAPEALQTADAVDL--------------GDLVAFY 209 Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDD---LKALNIQHDIFISEDDFHRGDPSPIR 274 F +++ + S ++K+ D LKA + D S +F + I Sbjct: 210 REAKKRFDDDEAF---QSTSRDEVVKLQGGDPVSLKAWGLLCD--QSRREFQK-----IY 259 Query: 275 DIID-NLARQGYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMVGDDVDRPL----L 325 D +D L+ +G + P + ++ D Q +F + G D +PL Sbjct: 260 DRLDIRLSERGESFYNPFLPAVIDGLKDAELLVTDDGAQCVFLEGVQGKD-GKPLPVIVQ 318 Query: 326 KSDGSYTYFAADLAYFKCKYER-----GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKK 378 KSDG + Y DLA + ++ G ++YV + + + + VA A + Sbjct: 319 KSDGGFNYATTDLAAIRYRFGAAPDGDGAKRVVYVTDAGQANHFAGVFQVAERAGWIPEG 378 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 +++ + LV+ DG K+ RAGD + LR ++DE Sbjct: 379 SRLEHVPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVERAEADLRSRLSEEERSESK 435 Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467 VG +V++ L + F F ++ + N Y+ YA R I R+ Sbjct: 436 EFIGHVATTVGLAAVKYADLSQNRITNYQFSFDRML-ALQGNTAPYLLYAVVRIAGIARK 494 Query: 468 AKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 D+ V+ + +F + E L+ L ++ VI P +L YL+ Sbjct: 495 GGDL-----------EVLGAQLQFSEPQEWALVRELLKFDAVIAEVEEELLPNRLCSYLF 543 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +L+ VF+ + + ++A+ L RL L A + +GL ++G+ + M Sbjct: 544 ELSQVFNRFYDQ------VPVLKADPEALP-SRLALCRLTADTLKAGLGLLGIATLERM 595 >gi|254361175|ref|ZP_04977319.1| arginine--tRNA ligase [Mannheimia haemolytica PHL213] gi|153092666|gb|EDN73715.1| arginine--tRNA ligase [Mannheimia haemolytica PHL213] Length = 575 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 136/598 (22%), Positives = 234/598 (39%), Gaps = 114/598 (19%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AM ++ LG++P A+ I+ ++ D + IAG GFIN++L+P +L + Sbjct: 37 GDYQANGAMGAAKKLGMNPREFAQKILENADLNGIADKLEIAGPGFINIFLNPEWLAENT 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 +S + + +G T V I++ S N MHVGH R ++GD + +AF G V Sbjct: 97 NS-SLQAVNFGIKTANPQTIV-IDYSSPNVAKEMHVGHLRSTIIGDAVVRTLAFLGNNVI 154 Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204 R ++ D G Q L L F+R + Y++D E V Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHASEMELSDLEAFYRAAKEHYDSDEAFAEKARNYV 214 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 G DKY + W + V M +++ LN+ +D Sbjct: 215 VKLQSG----DKYCLTM-------WKKL-----VDITMHHNQENYNRLNV---TLTEKDV 255 Query: 265 FHRGDPSP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDV 320 +P + +I+ +L +G E D ++F GD + Sbjct: 256 MGESLYNPMLPEIVADLKAKGLAVED---------------DGALVVFLDEFKNKDGDPM 300 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 + K DG + Y D+A K +YE D + S + ++++ A ++ K Sbjct: 301 GVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDSRQAQHMQQ----AWLITRKAG 356 Query: 380 QI-NVLLCEL----VRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 + + E + L +DG P K R+G + L+ ++DE Sbjct: 357 YVPDSFSLEHPFFGMMLGKDGKPFKT--RSGGTVKLKDLLDEAVERADKLIAERSTELTA 414 Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467 V SV++ L + + FD+ + + N Y+QYAY R RSIF + Sbjct: 415 EEKAAVVEAVAIGSVKYSDLSKNRTTDYVFDWDNML-TFEGNTAPYMQYAYTRIRSIFAR 473 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 A ++D + ++ E + E L V L ++ + P+ L YLY+ Sbjct: 474 A-----NIDENALSGSIQLNEPK----ERALAVKLLQFEEALNGVAKEGMPHILCQYLYE 524 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA F + P L + RL+L A + GL+++G+++ +M Sbjct: 525 LAGSFSSFY---EACPILNAEETTKNS----RLKLAALTAKTLKQGLDLLGIKTVEKM 575 >gi|291521118|emb|CBK79411.1| arginyl-tRNA synthetase [Coprococcus catus GD/7] Length = 561 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 132/540 (24%), Positives = 224/540 (41%), Gaps = 95/540 (17%) Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 G++N Y+ + + + + +YG + GK + I++ S N HVGH R ++ Sbjct: 76 GYLNFYVDKAQYAQQIIDKYNNTTDYGCSDQGKDKTICIDYSSPNVAKNFHVGHLRTTII 135 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVY 205 G++L + + GY+V R ++ D G Q L ++ W ++A+ + + E +Y Sbjct: 136 GNSLYKIFSKLGYKVVRINHLGDWGTQFGKLIVAYKKWGSREAV--EEKGIEE--LMDIY 191 Query: 206 LK-HVGKELADKYSSEL------LNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQ 255 +K H E D + E + E+ L I +D S++ M++ L ++ Sbjct: 192 VKFHEEAEKDDSLNDEARAWFLKMEQGNEEALEIWQWFRDISLKEFMRV----YNILGME 247 Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRS 313 D F E F+R + D+I L G + E G + P Sbjct: 248 FDSFAGE-SFYRDKTA---DVIKRLTDDGLLKESQGAMIVPL------------------ 285 Query: 314 TMVGDDVDRP---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDH------- 360 D+ D P + K DGS Y DLA Y K Y FD +YV G + Sbjct: 286 ----DEYDMPPCIVAKKDGSSIYATRDLAAILYRKATY--NFDRCLYVTGLEQKLHFAQV 339 Query: 361 --------SGYVKRLEAVA-AAVSEKKAQI-----NVLLCE-LVRLYRDGMPIKMSKRAG 405 + Y K L + VS K +I NV+ E L+R + + ++ Sbjct: 340 FKVIELMGNDYAKNLVHIPYGLVSLKSGKISSRKGNVIFAEDLLRESINKTTSIIEEKNP 399 Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 D V +VG ++ F L+ + + + FD+ K+ E YVQY YAR S+ Sbjct: 400 DIPDKEEVAKQVGIGAIIFNDLYNQRIKDVIFDWNKLLNFDGETGP-YVQYTYARASSVL 458 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 R+ ++ +D+ L D + + L+ + YP+VI++A EP +A Y Sbjct: 459 RKIGEVPDTIDYTLLT----------DEASIGLLKEIERYPQVIKDAAERYEPSVIARYS 508 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 DLA F+ + + N V+ K T R +V II L+++G++ P +M Sbjct: 509 IDLAHAFNKFYHECQIN-----VEDKTTKYT--RTNVVKIARYIIKDALSLLGIQCPEQM 561 >gi|261252368|ref|ZP_05944941.1| arginyl-tRNA synthetase [Vibrio orientalis CIP 102891] gi|260935759|gb|EEX91748.1| arginyl-tRNA synthetase [Vibrio orientalis CIP 102891] Length = 577 Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 134/607 (22%), Positives = 232/607 (38%), Gaps = 130/607 (21%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG +P A+ ++ + ++ IAG GFIN++LS +L K Sbjct: 37 GDYQANGVMGVAKKLGTNPREFAQKVLDVLDLEGIASKTEIAGPGFINIFLSEEFLAKQA 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + + G + T V ++ + N MHVGH R ++GD + + F G++V Sbjct: 97 DAALAD-ARLGVTAEEQKTIV-ADYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGYYPG 203 R +I D G Q L L F+R + LY+ D + Sbjct: 155 RANHIGDWGTQFGMLIANLERVQKESGEVSMELSDLEAFYRESKKLYDEDEEFAVRARNY 214 Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM-------MKIIRDDLKALNIQH 256 V G D+Y +E+ W +V VQ + + RDD+ ++ + Sbjct: 215 VVKLQSG----DEYCAEM-------WKKLVDVTMVQNQRNYDRLNVSLTRDDVMGESMYN 263 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D+ P I+ +L +QG E D Q++F Sbjct: 264 DML----------PG----IVADLKQQGLAQED---------------DGAQVVFLEEYK 294 Query: 317 ---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VK 365 G+ + + K DG + Y D+A K +YE G D ++Y + S + V+ Sbjct: 295 NKDGEAMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQHQHLMQAWTIVR 354 Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------- 416 + V VS + ++L +DG P K RAG + L ++DE Sbjct: 355 KAGYVPEEVSLEHHAFGMMLG------KDGRPFKT--RAGGTVRLADLLDEAEERATKLI 406 Query: 417 ------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 V +V++ L + + FD+ + + N Y+QYAY Sbjct: 407 ESKNPSLDAEEKSNIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGNTAPYMQYAY 465 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 R SIF +A + D + E + E LI L ++ +++ +P Sbjct: 466 TRVSSIFAKA-----GISMDNLAGEIKVTEEK----EKALIAKLLQFEEAVQSVAREGQP 516 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 + + YL++LA F + + + + RL+L A I GL+++G Sbjct: 517 HIMCSYLFELAGQFSSFYEA------CPILNTEDESVKQSRLKLAALTAKTIKQGLSLLG 570 Query: 579 VESPNEM 585 +E+ M Sbjct: 571 IETLERM 577 >gi|227551770|ref|ZP_03981819.1| arginine--tRNA ligase [Enterococcus faecium TX1330] gi|257887069|ref|ZP_05666722.1| arginyl-tRNA synthetase [Enterococcus faecium 1,141,733] gi|257895634|ref|ZP_05675287.1| arginyl-tRNA synthetase [Enterococcus faecium Com12] gi|257898223|ref|ZP_05677876.1| arginyl-tRNA synthetase [Enterococcus faecium Com15] gi|293377755|ref|ZP_06623944.1| arginine--tRNA ligase [Enterococcus faecium PC4.1] gi|227179075|gb|EEI60047.1| arginine--tRNA ligase [Enterococcus faecium TX1330] gi|257823123|gb|EEV50055.1| arginyl-tRNA synthetase [Enterococcus faecium 1,141,733] gi|257832199|gb|EEV58620.1| arginyl-tRNA synthetase [Enterococcus faecium Com12] gi|257836135|gb|EEV61209.1| arginyl-tRNA synthetase [Enterococcus faecium Com15] gi|292643755|gb|EFF61876.1| arginine--tRNA ligase [Enterococcus faecium PC4.1] Length = 563 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 137/596 (22%), Positives = 258/596 (43%), Gaps = 102/596 (17%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P+ HG ++ A L++ P IA + +I + + + + G ++N + Sbjct: 27 LLENPKSAEHGDVAF-PAFSLAKVYRKAPQQIAADLAEKID-SANFEKIEVVGP-YLNFF 83 Query: 93 LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 ++ + +K+L ++V YG + IG V I+ S N P+ +GH R V+G+++ Sbjct: 84 MNKELISKKVLQTVVKEKEHYGDSNIGNQGTVPIDMSSPNIAKPISMGHLRSTVIGNSIG 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +M GY+ R ++ D G Q L ++ W ++A+ P +Y++ Sbjct: 144 FIMEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEEAVKAE----PINELLRLYVQF-- 197 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 E+A+ + LN W +++ +A + + RD+ +K N +D+ + D Sbjct: 198 HEVAE--TEPELNEEARAWFKRLEEGDEEAIQLWQWFRDESMKEFNKIYDLLEVQFDSLN 255 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + +I++ L + + E K + D+ L P Sbjct: 256 GEAFYNDKMDEIVELLEEKHLLNE-------DKGAEIVDLSAYDL------------NPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370 L KSDG+ Y DLA Y K Y+ F +YV+G++ S + K+L+AV Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FKQSLYVVGNEQSYHFKQLKAVLKEMGFDWS 354 Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 +S +K +I VLL E++ ++S++ D V + Sbjct: 355 DDMHHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAIQSAKEQISEKNPDLENKDVVAKQ 413 Query: 417 VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +V F L KN L FDF V+ + + P YVQY +AR S+ +A Sbjct: 414 VGVGAVIFHDL--KNDRLNTFDFNLEEVVRFEGETGP--YVQYTHARAVSLLEKA----- 464 Query: 474 DLDFDLFPRNVIPQESE----FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 +P E+ D +++ + +YP + +A EP +A + LA Sbjct: 465 ---------GFVPSETADYALNDDISWEVVKLVQKYPETVLSAGEKYEPSVIAKHAIKLA 515 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ +++H + + A++ + RL LV+AV ++ L ++G+ +P++M Sbjct: 516 QAFNKYYAHTK-------ILADDEQ-KEARLALVYAVTVLLKEDLRLLGLHAPDKM 563 >gi|229495652|ref|ZP_04389381.1| arginyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406] gi|229317422|gb|EEN83326.1| arginyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406] Length = 603 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 137/620 (22%), Positives = 250/620 (40%), Gaps = 106/620 (17%) Query: 30 DRIVIERPRDCAHGH--LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87 D+I I++ R GH L + LSR P A I +K + + F KG Sbjct: 26 DQIQIQKTRAEFAGHYTLVVFPLLKLSRK---KPEETATEIGTSLKAEFPWITDFNVVKG 82 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 F+NL LS + ++LS+I ++ + V +E+ S N P+H+GH R ++G Sbjct: 83 FLNLSLSTALWLELLSAIDGDSAWGHTSVTEQSPLVMVEYSSPNTNKPLHLGHVRNNLLG 142 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY----NNDSDLPEGYYPG 203 ++LA ++ +G V + +ND G I L+ + ++ + D G + Sbjct: 143 NSLARILTANGKRVVKTNIVNDRGIHICKSMLA-WQKWGNGITPESAGKKGDHLVGDFYV 201 Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIV------------KDYSVQAMMKIIR----- 246 + KH E+AD + ++ E P + D V A+ +++ Sbjct: 202 AFDKHYKAEVADLMAQGMIKEEAEAKAPSMVEARDLLRRWEAGDEEVLALWRMMNQWVYD 261 Query: 247 ---DDLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNL---ARQGYVYEGILPPPKSKTT 299 + + L + D I+ + + +G +R + + L G V+ Sbjct: 262 GFDETYRRLGVDFDKIYYESETYLKGKAEVLRGLDEGLFVKHEDGSVW------------ 309 Query: 300 QKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357 + + D +D + LL+SDG+ Y D+ K +YE D MIYV+G Sbjct: 310 -------------ADLTADGLDEKILLRSDGTSVYMTQDIGTAKMRYESYPIDQMIYVVG 356 Query: 358 SDHSGYVK----RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 ++ + K L+ + + + + + EL +G KM R G + + Sbjct: 357 NEQEYHFKVLSILLDRLGFSFGKSLVHFSYGMVEL----PNG---KMKSREGTVVDADDL 409 Query: 414 VDE-------VGSDSVRFMMLWRKNSE-------LLDFDFCKVKEQSKENPVF------- 452 +DE + ++ R +L + L D + +K ++N F Sbjct: 410 MDEMIASARAIAQEAGRAALLPEDEMQEVARRVGLGDLKYFILKVDPRKNMTFNPEESVD 469 Query: 453 -------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 ++QY YAR RS+ +A+ + L + ++ E+ LI L+EY Sbjct: 470 FNGNTASFIQYTYARIRSLVEKARVAGEAPEAPLTSEAAVRLDNAHSDREVALIRQLSEY 529 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 P ++ A + P +A Y+Y+L G+ S + P LR + + RL + Sbjct: 530 PSIVAEAGKSFSPALIANYVYELVK---GYNSFYHDCPVLR---EEDDSIRHTRLYISRI 583 Query: 566 VASIINSGLNIIGVESPNEM 585 VA II ++++G+E P M Sbjct: 584 VADIIARAMDLLGIEMPERM 603 >gi|28210674|ref|NP_781618.1| arginyl-tRNA synthetase [Clostridium tetani E88] gi|38372518|sp|Q896N5|SYR_CLOTE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|28203112|gb|AAO35555.1| arginyl-tRNA synthetase [Clostridium tetani E88] Length = 563 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 131/539 (24%), Positives = 222/539 (41%), Gaps = 93/539 (17%) Query: 88 FINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N ++ S K ++ I+ +YG + GKG K IE+ S N P HVGH + Sbjct: 77 YLNFFVDKSIFSKNVIEKILEEKDKYGASNEGKGRKALIEYSSPNIAKPFHVGHLFSTAI 136 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGVY 205 G+ L + F GY+ R ++ D G Q L A W ++AL P +Y Sbjct: 137 GNALYKIFTFEGYDCERLNHLGDWGTQFGKLIAAYKRWVDEEALEKE----PIKELLRIY 192 Query: 206 LKHVGKELADKYSSE--LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 +K + D E L+F K L ++ V+ K LK + + E Sbjct: 193 VKFHDEAEKDPALEEEGRLHF---KRLEDGEEEEVKLWKKFRELSLKEFEKVYHMLNVEF 249 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST----MVGDD 319 D + G+ S D +D + + +D K LL S ++ +D Sbjct: 250 DSYAGE-SFYGDKMDAVVEE--------------------IDEKGLLVESNGAKVVMLED 288 Query: 320 VDRP---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373 + P + KSDG+ Y DLA Y K Y+ F IYV+G + S + K++ Sbjct: 289 YNMPPCIIKKSDGATIYATRDLATAIYRKKTYD--FYKSIYVVGLEQSLHFKQVFTTLKL 346 Query: 374 VSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 + A + LVR K+S R G+ I L ++ E ++ ++ KNS Sbjct: 347 MGHDWADDCTHIGFGLVRF----TDRKLSTRKGEVIFLEDLLKESVDKTLE--IINEKNS 400 Query: 433 ELLDFD------------FCKVKEQSKENPVF--------------YVQYAYARCRSIFR 466 EL + + F +K + + VF YVQY+YAR +SI R Sbjct: 401 ELENKEETAKKIGIGAVIFTYLKNNRERDIVFSWDEMLSFDGETGPYVQYSYARGKSILR 460 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 ++ +I D+D+ E +L+ L + + I A EP + Y+ Sbjct: 461 KSGEIQGDVDYSKLN----------SKEEFELVKTLEGFNKSILQAIEKLEPSIVTRYVI 510 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++A F+ ++H + A + ++ R++LV + +I + LN++G+E +M Sbjct: 511 EVAKAFNKFYNHN------SILNAEDEEIKKARIKLVESTCQVIKNALNLLGIEVVEKM 563 >gi|241760366|ref|ZP_04758461.1| arginine--tRNA ligase [Neisseria flavescens SK114] gi|241319244|gb|EER55722.1| arginine--tRNA ligase [Neisseria flavescens SK114] Length = 572 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 125/594 (21%), Positives = 242/594 (40%), Gaps = 86/594 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ G N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQAAKNPDFGDFQINGVMGAAKKAKQNPRELAQKVAEALADNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P +L + + + ++ +G + V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRPDFLAQNIQT-ALNDARFGIAKTAQPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ F G V R+ ++ D G Q L + + + +DL + Y Sbjct: 144 RVLEFMGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203 Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 AD + L +E L + K D S+ + D L ++ + E ++ Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRP 323 ++ ++D+L ++G E D +++F G+ Sbjct: 262 ----DDLQPVVDDLVQKGLAVED---------------DGAKVVFLDEFKNKEGEPAAFI 302 Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVS----EKK 378 + K G + Y + DLA + + R D ++YV+ + + ++L + + K Sbjct: 303 VQKQGGGFLYASTDLACLRYRIGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPEDAK 362 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 A+ + + +DG P K R+GD + L ++ E Sbjct: 363 AE---FIGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAA 417 Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VG +V++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 418 KIGKTVGIGAVKYADLSKNRTSDYVFDWDAMLS-FEGNTAPYLQYAYTRVQSVFRKAG-- 474 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 ++D V+ + E QL L ++ V+++ P+ LA YLY +A++ Sbjct: 475 ----EWDTNEPTVLTE-----PLEKQLAAELLKFEDVLQSVADTAYPHYLAAYLYQIATL 525 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + P L+ A RLQL + GL ++G++ N M Sbjct: 526 FSRFY---EACPILKSEGATRNS----RLQLAKLTGDTLKQGLGLLGIDVLNVM 572 >gi|311896747|dbj|BAJ29155.1| putative arginyl-tRNA synthetase [Kitasatospora setae KM-6054] Length = 587 Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 129/591 (21%), Positives = 241/591 (40%), Gaps = 81/591 (13%) Query: 38 RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 R H +N + L++ G P +AE + + + P V +G GF+NL L+ Sbjct: 35 RPSEHADFQSNVGLALAKEAGRPPRDLAEALRSELAAGPFAADV--SGPGFLNLRLADRL 92 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 L +++ + + G L G++ I++ + N MHVGH R V+GD+L +++F Sbjct: 93 LWAQVTARLAA-PRLGVGLPLAGSRTVIDYSAPNIAKEMHVGHLRTTVIGDSLVRVLSFL 151 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217 G EV R+ ++ D G Q L + + +A ++ ++ + L + + ++ Sbjct: 152 GGEVVRQNHLGDWGTQFGML-IQYLDEHPEAGWHGRAEQGDAAAQVALLDTLYRAARKEF 210 Query: 218 SSELLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHD---IFISEDDFHRGD 269 + +F E +V + + A +++ A +D + ++E D Sbjct: 211 ERD-QDFVERARGRVVALQSGDEATTGAWRELVAVSTAAFQQLYDRLGVLLTEAD--SAG 267 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-DDVDRPLL--K 326 S ++D +A + ++ G + D +F + G D PL+ K Sbjct: 268 ESTYNHLLDEVAEE-LLHSG----------AAVESDGALCVFFEDVTGPDGAPVPLIVRK 316 Query: 327 SDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 DG Y Y A DLA + + E D ++YV+ + S + K + A A A + + Sbjct: 317 KDGGYGYAATDLATLRHRVRELRADRILYVVDARQSLHFKMVFATARRAGWLPAGVEAVH 376 Query: 386 CEL-VRLYRDGMPIKMSKRAGDFITLRHVVD---------------------------EV 417 + G P K R G + L ++D Sbjct: 377 VPFGTVMGPGGTPFK--TREGGTVRLAELLDAAVAAAHRAVADKPHELSEAELDDVARAA 434 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G +V++ L ++ FD ++ + N Y+QYA+AR R++ +A+ + P + Sbjct: 435 GIGAVKYADLSTSRTKNYVFDIDQMVSL-QGNTGVYLQYAHARLRTLLGKAQAVDPAPEV 493 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV---FHG 534 D +P E +E LI+ L + +V+ EP++LA YL+ LA F+G Sbjct: 494 D----PGLPLEP----AERALILQLEGFGQVLREVADEAEPHRLAGYLFALAKALTEFYG 545 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++A+ RL L A + GL+++G+ +P M Sbjct: 546 SCP---------VLKADTPARRANRLALCRLTADTLAQGLDLLGLRAPERM 587 >gi|240948908|ref|ZP_04753264.1| arginyl-tRNA synthetase [Actinobacillus minor NM305] gi|240296723|gb|EER47334.1| arginyl-tRNA synthetase [Actinobacillus minor NM305] Length = 575 Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 136/601 (22%), Positives = 237/601 (39%), Gaps = 120/601 (19%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AM ++ LG++P A+ I+ +D VD + IAG GFIN++L+ ++L + Sbjct: 37 GDYQANGAMGAAKKLGMNPREFAQKILDNANLDGIVDKLEIAGPGFINIFLNKAWLAEN- 95 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 ++ + + +G T V +++ S N MHVGH R ++GD + + F G V Sbjct: 96 ANQALQAVNFGIQTANPQTIV-VDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNNVI 154 Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204 R ++ D G Q L L F+R + Y++D E V Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHASQMELSDLEAFYRAAKEHYDSDEAFAEKARNYV 214 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 G D+Y + W + V M+ +++ LN+ +D Sbjct: 215 VKLQSG----DEYCRTM-------WKKL-----VDITMRHNQENYDRLNV---TLTEKDV 255 Query: 265 FHRGDPSP-IRDIIDNLARQGYVYEG------ILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 +P + +I+ +L +G E L K+K G Sbjct: 256 MGESLYNPMLPEIVADLKAKGLAVEDEGALVVFLEEFKNKD------------------G 297 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 D + + K DG + Y D+A K +YE D + S + ++++ A ++ Sbjct: 298 DPMGVIVQKKDGGFLYTTTDVAAAKYRYETLKADRALVFSDSRQAQHMQQ----AWLITR 353 Query: 377 KKAQI-NVLLCEL----VRLYRDGMPIKMSKRAGDFITLRHVVDE--------------- 416 K + + E + L +DG P K R+G + L+ ++DE Sbjct: 354 KAGYVPDSFSLEHPFFGMMLGKDGKPFKT--RSGGTVKLKDLLDEAVERADKLISARSTD 411 Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 V SV++ L + + FD+ + + N Y+QYAY R RSI Sbjct: 412 LTAEEKAAVVEAVAIGSVKYSDLSKNRTTDYVFDWDNML-TFEGNTAPYMQYAYTRIRSI 470 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 F +A +D + N++ E + E L V L ++ + P+ L Y Sbjct: 471 FARA-----GIDANNLTGNILLTEDK----ERALAVKLLQFEEALNGVAKEGMPHILCQY 521 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 LY+LA F + P L +A + RL+L A + GL+++G+++ + Sbjct: 522 LYELAGTFSSFY---EACPILNAEEA----VKNSRLRLAALTAKTLKQGLDLLGIKTVEK 574 Query: 585 M 585 M Sbjct: 575 M 575 >gi|293570628|ref|ZP_06681679.1| arginyl-tRNA synthetase [Enterococcus faecium E980] gi|291609299|gb|EFF38570.1| arginyl-tRNA synthetase [Enterococcus faecium E980] Length = 563 Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 137/596 (22%), Positives = 258/596 (43%), Gaps = 102/596 (17%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P+ HG ++ A L++ P IA + +I + + + + G ++N + Sbjct: 27 LLENPKSAEHGDVAF-PAFSLAKVYRKAPQQIAADLAEKID-SANFEKIEVVGP-YLNFF 83 Query: 93 LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 ++ + +K+L ++V YG + IG V I+ S N P+ +GH R V+G+++ Sbjct: 84 MNKELISKKVLQTVVKEKEHYGDSNIGNQGTVPIDMSSPNIAKPISMGHLRSTVIGNSIG 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +M GY+ R ++ D G Q L ++ W ++A+ P +Y++ Sbjct: 144 FIMEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEEAVKAE----PINELLRLYVQF-- 197 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 E+A+ + LN W +++ +A + + RD+ +K N +D+ + D Sbjct: 198 HEVAE--TEPELNEEARAWFKRLEEGDEEAIQLWQWFRDESMKEFNKIYDLLEVQFDSLN 255 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + +I++ L + + E K + D+ L P Sbjct: 256 GEAFYNDKMDEIVELLEEKHLLNE-------DKGAEIVDLSAYDL------------NPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370 L KSDG+ Y DLA Y K Y+ F +YV+G++ S + K+L+AV Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FKQSLYVVGNEQSYHFKQLKAVLKEMGFDWS 354 Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 +S +K +I VLL E++ ++S++ D V + Sbjct: 355 DDMHHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAIQSAKEQISEKNPDLENKDVVAKQ 413 Query: 417 VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +V F L KN L FDF V+ + + P YVQY +AR S+ +A Sbjct: 414 VGVGAVIFHDL--KNDRLNTFDFNLEEVVRFEGETGP--YVQYTHARAVSLLEKA----- 464 Query: 474 DLDFDLFPRNVIPQESE----FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 +P E+ D +++ + +YP + +A EP +A + LA Sbjct: 465 ---------GFVPSETADYALNDDISWEVVKLVQKYPETVLSAGEKYEPSVIAKHAIKLA 515 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ +++H + + A++ + RL LV+AV ++ L ++G+ +P++M Sbjct: 516 QAFNKYYAHTK-------ILADDEQ-KEARLALVYAVTVLLKEDLRLLGLHAPDKM 563 >gi|149198116|ref|ZP_01875163.1| arginyl-tRNA synthetase [Lentisphaera araneosa HTCC2155] gi|149138718|gb|EDM27124.1| arginyl-tRNA synthetase [Lentisphaera araneosa HTCC2155] Length = 587 Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 131/592 (22%), Positives = 239/592 (40%), Gaps = 92/592 (15%) Query: 43 GHLSTNAAMILSRPLG------LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS 96 G N +M L+ LG ++P +A I+ ++++ + IAG GFIN L Sbjct: 39 GDYQCNVSMELAGKLGKARGEKVNPRQVATAIMEKLEVSELSEEPEIAGPGFINFKLK-- 96 Query: 97 YLRKILSSIVVSGIEYGRNLIGKGT---KVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 +L+ ++ + R I K +V ++F N MHVGH R ++GD++A Sbjct: 97 --NDVLADYAITMLRDERLGIAKVANPERVLVDFSGPNLAKEMHVGHLRSTIIGDSVARF 154 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHV 209 M F G+EV R ++ D G Q L + AL N + +DL + Y + Sbjct: 155 MEFEGHEVLRMNHVGDWGTQFGMLIQFIRTTRPGALENPENFEIADLEDFYREAKKMFDE 214 Query: 210 GKELADKYSSELLNFP--EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 E D +++ +E L + K + +++ + Q DI IS+ R Sbjct: 215 SDEFKDAARRAVVDLQSGDEATLAVWKVFCEESLKHC-----HEIYGQLDIKISD----R 265 Query: 268 GDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + ++D++++L G K++ T+ + DD P Sbjct: 266 GESAYNDMLKDVVEDLKSAG----------KAEQTEGA----WGVFLDGYKNKDDEPLPT 311 Query: 325 L--KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381 + KSDG Y Y DLA + ++ E+ D +IYV + + ++ ++ + Sbjct: 312 IVQKSDGGYIYATTDLAAIRYRFAEQKTDKLIYVTDARQKTHFDQVFEISELMDWAPKDS 371 Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------- 416 + + L DG P K R G + L+ ++ E Sbjct: 372 MRHIGFGMMLGADGKPFKT--RTGGTVKLKDLLAEAESRAGELARELTPGLSEEEYKEIA 429 Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK-DIFP 473 G V++ L + FD+ K+ + N Y+ +AR R + R+A D+ Sbjct: 430 FAAGLGGVKYSDLSHGVATDYKFDWNKML-ATDGNTAIYILMTFARTRGLSRKAGVDVDS 488 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 +D R Q E++LI +A P V + P+ L +LY+LA F Sbjct: 489 LVDATDLARLTEEQ-------EIKLIKKIASTPDVWQGVVRDLAPHLLLNHLYELARDFG 541 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W+ ++ + +L RL L V ++ GL+++G+++ +++ Sbjct: 542 SFWNS------CPIMKLEDEELKQSRLALAGGVGRVLKWGLSMVGIQTLDKL 587 >gi|300122665|emb|CBK23232.2| unnamed protein product [Blastocystis hominis] Length = 601 Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 139/595 (23%), Positives = 241/595 (40%), Gaps = 124/595 (20%) Query: 48 NAAMILSRPLGL---------DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98 N+AM L++ L +P ++I+ + V+ +AG GFINLYL S++ Sbjct: 53 NSAMGLTKKLQALRGKENAPKNPRECGQIIIDHLPESEFVEKTELAGPGFINLYLKKSWV 112 Query: 99 RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158 + + SI+ G + +V I++ S N MHVGH R ++GD+LA ++ F G Sbjct: 113 AQHILSILNHGFVPPPT---ERKRVIIDYSSPNIAKDMHVGHLRSTIIGDSLARILEFCG 169 Query: 159 YEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEG 199 +EV R ++ D G Q L L+VF++ + ++ D E Sbjct: 170 HEVIRINHVGDWGTQFGMLIAHLQDIAPDFETNPPSIEDLTVFYKAAKCKFDEDKAFQER 229 Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259 + +E+ + S N K L V + K+ K LN+ + Sbjct: 230 AH---------QEVVNLQSGVPKNLAMWKTLCSVSE-------KMFSKVYKMLNVDPRLK 273 Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC---DMDRKQLLFRSTMV 316 + + F Y +LP + K D D ++LF Sbjct: 274 MMGESF---------------------YNPLLPAMVKELDAKGLLQDSDGAKVLFPQ--- 309 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDH-------------SG 362 G +V + KSDG + Y + D+ K + E D +IYV+ S +G Sbjct: 310 GFEVPLIIQKSDGGFGYDSTDMTAIKYRIQEMKADWIIYVVDSGQALHFQQVFQAARDAG 369 Query: 363 YVK--RLEAVAAAVSE--------KKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT--- 409 +V RL+ V V + +A +V L +L+ + M KR D ++ Sbjct: 370 WVGSVRLDHVGFGVVQGEDKKKFKTRAGKSVRLVDLLNEAAEKATAIMKKRVEDGVSGVS 429 Query: 410 ----LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV-FYVQYAYARCRSI 464 + ++G V++ L + + L D+ F + S E Y+QY++ARC SI Sbjct: 430 DPKEIEEAAAQLGYGGVKYFDL--RQNRLSDYVFSFERMLSPEGDTNVYLQYSHARCMSI 487 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R+A P+ +L I E SE L ++ + V+E + P ++ Y Sbjct: 488 IRKA----PEEVEELKKHTQITLEH---PSEWDLACYILRFSDVLEQVPMDLMPNRICKY 540 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 +YDL+ +G + R+ + + N+ RL LV A ++ G +++G+ Sbjct: 541 IYDLSIKLNGFY---RDCRVIGSPEQNS------RLLLVAAAEKVMRQGFDLLGI 586 >gi|219682170|ref|YP_002468554.1| arginyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|254782948|sp|B8D7E4|SYR_BUCAT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|219621903|gb|ACL30059.1| arginyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|311085983|gb|ADP66065.1| arginyl-tRNA synthetase [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086558|gb|ADP66639.1| arginyl-tRNA synthetase [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] Length = 574 Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 145/592 (24%), Positives = 244/592 (41%), Gaps = 82/592 (13%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 VI + GH N + ++ L P +A I+ IK + + GFIN Sbjct: 26 VITLNKKTKIGHYQLNNLIKIANISNLKPFELANRIILNIKKKYMYKEITFSQPGFINFL 85 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 ++P ++ + L I +S G N + + I++ S N MH+GH R ++GD +A Sbjct: 86 INPYWISEQLEKIFLSP-RLGINHVN-AQNIVIDYSSPNIAKEMHIGHLRSTIIGDVMAR 143 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKH-V 209 ++ F G+ V R +I D G Q L + + + L N+ L E YY K+ + Sbjct: 144 ILDFLGHNVIRANHIGDWGTQFGML---IAYLEVKKLVNSPLSLMKLEEYYCKAKKKYDI 200 Query: 210 GKELADK---YSSELLN---FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 + A+K Y +L N + W +V ++ KI + L +H + E Sbjct: 201 DQLFAEKSREYVVKLQNGDQYCYSIWKKLV-SITMLENCKIYKRLHVTLKKKHT--MGES 257 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323 +++ P +II++L + E K+ +T + K L G+ + Sbjct: 258 IYNKMLP----NIIEDLKNKKIAIE------KNGSTIVFLKEFKNRL------GEPMGVV 301 Query: 324 LLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 + K D + Y D+A K +Y+ D +IY S ++ L+A A N Sbjct: 302 IQKKDKGFLYSTTDIACLKYRYQVLHADRIIYYTDSRQHQHL--LQAWTIAKKALYISQN 359 Query: 383 VLLCELV---RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-------- 431 +LL + L +D P K R GD I L ++DE ++R + + N Sbjct: 360 LLLEHHIFGMMLSKDKRPFKT--RDGDTIKLSALLDEATERAMRLIKNKQPNLSKKKLNQ 417 Query: 432 -SELLDFDFCKVKEQSKE---NPVF--------------YVQYAYARCRSIFRQAKDIFP 473 S ++ K + SK N +F Y+QYAY R SI +++ Sbjct: 418 LSNIIGVGAVKYADLSKNRNTNYIFDWNEMLSFEGNTAPYIQYAYTRIVSILKKSNMPIK 477 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 L +F + +ESE + L + + E+ +I + P+ L YLY LA+ F Sbjct: 478 KLKEKIF----LTKESEIN-----LAIKILEFEEIILLISQKGTPHILCKYLYHLATSF- 527 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 SH EN + F + K RL+L A + GLN++G+ +M Sbjct: 528 ---SHFYENCSILFPKK--IKTCKSRLKLSILTAKTLKKGLNMLGIRVVKKM 574 >gi|256425385|ref|YP_003126038.1| arginyl-tRNA synthetase [Chitinophaga pinensis DSM 2588] gi|256040293|gb|ACU63837.1| arginyl-tRNA synthetase [Chitinophaga pinensis DSM 2588] Length = 642 Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 132/607 (21%), Positives = 241/607 (39%), Gaps = 131/607 (21%) Query: 75 DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK----GTKVNIEFVSA 130 +PD+ + + KGF+N+ ++ Y + L + IGK G KV +E+ S Sbjct: 71 NPDLVAGYNVIKGFLNIQVNEQYWAQYLQQ------HFNNRNIGKKPSNGKKVMVEYSSP 124 Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRYQQA 188 N P+H+GH R +G ++ ++ +GYEV + +ND G I + LA +F Sbjct: 125 NTNKPLHLGHLRNNFLGYAVSEILKANGYEVIKANLVNDRGIHICKSMLAWQLFAH---- 180 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE---------------------- 226 D PE G+ H+ + K+ S L E Sbjct: 181 -----GDTPES--TGIKGDHLVGDYYVKFESILKEQTEPIIARALEHDYKDFEGADKERM 233 Query: 227 EKWLPIVKDYSVQA---MMKIIRDDLKALN-----IQHDIFISEDDFHRGDPSPIRDIID 278 EK + + +QA + + D++K L+ I I + G+P +R + Sbjct: 234 EKLVTVFHKPEIQADQEKLDKLNDEIKELSRKQTEIMQQAKIMLQQWEAGNPE-VRALWA 292 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST--MVGDDV---------------- 320 + G+VY+G +T ++ +D ++ + S ++G D+ Sbjct: 293 TM--NGWVYKGF-----DQTYKRLGIDFDKMYYESETYLLGKDLVEEGLAKGILFKKEDN 345 Query: 321 ------------DRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRL 367 ++ LL+ DG+ Y DL + KY + D +YV+ + + + K L Sbjct: 346 SVWIDLTADGLDEKLLLRGDGTSVYMTQDLGTARLKYADYQMDQSLYVVADEQNYHFKVL 405 Query: 368 EAVAAAVSEKKA----QINVLLCEL----------VRLYRDGMPIKMSKRAGDFITLRHV 413 + + + E A ++ + EL + D + ++M A + Sbjct: 406 QLILQKLQEPCADGIYHLSYGMVELPSGRMKSREGTVVDADDLIVEMINTAEEQTKASGK 465 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF--------------YVQYAYA 459 +D++ D++ + L F ++ K+ VF +VQYA+A Sbjct: 466 LDDMSEDALGLLY---NMIGLGGLKFFLLRVDPKKKMVFDPKESISLQGFTSTFVQYAHA 522 Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 R +SI R D+ PD+D + T E +LIV +Y V+E A P Sbjct: 523 RIKSILR---DVAPDVD----KLEGYCHKGSLTTLEKELIVLNEQYDNVLEEAAKEMSPS 575 Query: 520 KLAFYLYDLASVFHGHWSHGREN-PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 +A Y Y LA F+ ++ ++ P QA + +RLQ++ A+ I + ++G Sbjct: 576 VIANYAYQLAQTFNSFYAEKKDGIPVHSVKQAETPEKQKLRLQIIKLTATTIAKSMKLLG 635 Query: 579 VESPNEM 585 ++ P M Sbjct: 636 IDVPERM 642 >gi|29839939|ref|NP_829045.1| arginyl-tRNA synthetase [Chlamydophila caviae GPIC] gi|33301690|sp|Q824H4|SYR_CHLCV RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|29834286|gb|AAP04923.1| arginyl-tRNA synthetase [Chlamydophila caviae GPIC] Length = 564 Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 151/585 (25%), Positives = 230/585 (39%), Gaps = 102/585 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR--- 99 GH N AM L+R L + P IAE IV I + S+ IAG GFIN S +L Sbjct: 40 GHYQCNDAMKLARTLKMAPRAIAEAIVNHIPKEI-FTSIEIAGAGFINFTFSKEFLNNSL 98 Query: 100 KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 K S + SG + KV I+F S N MHVGH R ++GD LA + AF G Sbjct: 99 KTFSEELSSGFR-----VKDPKKVVIDFSSPNIAKDMHVGHLRSTIIGDCLARVFAFVGN 153 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 +V+R +I D G A + Y Q + D + E +L Y Sbjct: 154 DVSRLNHIGDWGT-----AFGMLITYLQEEPSEDIENLE-------------DLTVLYKK 195 Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDIID 278 F E+ K S ++ + D AL + I ISE F + I +I+D Sbjct: 196 AHARFAEDAEF---KKRSQTNVVALQAGDPSALKLWKQICAISERAFQK-----IYNILD 247 Query: 279 -NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS----TMVGDDVDRPLL--KSDGSY 331 + ++G E P + Q D++ K L+ S + + PL+ KSDG Y Sbjct: 248 IAIEKRG---ESFYNPFLPEIIQ--DLENKNLITISDNAKCVFHEGFSIPLMVQKSDGGY 302 Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVS---EKKAQINVLLCE 387 Y DLA + + G D +I V S + + LEA A A K+ +V Sbjct: 303 NYATTDLAAMRYRVNNDGADKIIIVTDMGQSLHFQLLEATALAAGYLPNKETFSHVGFG- 361 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420 L D K R+G+ I L+ ++D +G + Sbjct: 362 ---LVLDSEGKKFKTRSGENIKLKELLDTAIDQAKATLKEHRPEISDEEISSRAPILGIN 418 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 ++++ L F F K+ + + N ++ YAY R + I R+ LD + Sbjct: 419 AIKYADLSSHRVSDYIFSFEKML-RFEGNTAMFLLYAYVRIQGIKRRLG--IETLDLEAT 475 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 P P SE L + L +P I+ P+ L YLY L + F Sbjct: 476 PNIQEP-------SEEALALALLRFPEAIDLTLKDLCPHFLTDYLYMLTNKF-------- 520 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N R RL L V + +G++++G+++ +++ Sbjct: 521 -NAFFRDCHIEGSSHQKERLYLCALVEKTLAAGMHLLGLQTLDKL 564 >gi|72091995|ref|XP_781259.1| PREDICTED: similar to Arginyl-tRNA synthetase [Strongylocentrotus purpuratus] gi|115958557|ref|XP_001191024.1| PREDICTED: similar to Arginyl-tRNA synthetase [Strongylocentrotus purpuratus] Length = 665 Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 148/598 (24%), Positives = 255/598 (42%), Gaps = 102/598 (17%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AMI+++ L + P +A+ I A I + ++ V IAG GFIN++L S+ Sbjct: 115 GDYQCNSAMIIAQQLKAQGSPVSPRVVAQQIQANIPSNDVIEKVDIAGPGFINIHLKKSF 174 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + +++ I+ G+ + K KV I+ S N MH+GH R ++G++++ LM F Sbjct: 175 ITPLVTGILTQGVL--PPPLSKKRKVVIDMSSPNIAKEMHIGHLRSTIIGESISRLMEFV 232 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS----DLPEGYYPGVYLKHVGKEL 213 G++V + ++ D G Q L + ++ Y N+S DL + +Y ++ G E Sbjct: 233 GHDVLKVNHLGDWGTQFGMLITHLADQFPN--YLNESPPIQDL-QKFYKESKVRFDGDEE 289 Query: 214 ADKYSSELLNFPEEKWLPIVK------DYSVQAMMKI-IRDDLKALNIQHDIFISEDDFH 266 K + +++ + I+K D S KI R D+K L + + F E Sbjct: 290 FKKRAYKMVVRLQGGEPSIIKAWELICDISKTEFNKIYARLDVKNLIPRGESFYQER--- 346 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL-- 324 + ++ L G++ + D RK M D PL Sbjct: 347 ------MNVVVQKLEAGGHL--------------EFDDGRK------IMFTPDSAVPLTI 380 Query: 325 LKSDGSYTYFAADLA--YFKCKYERGFDNMIYVMGSDH--------SGYVK--------- 365 +KSDG YTY +D+A Y + ++G + +IYV+ + SG K Sbjct: 381 VKSDGGYTYDTSDMATLYQRVHEDKG-ERLIYVVDAGQATHFDAIFSGCRKLGWYDPNNV 439 Query: 366 RLEAVAAAV--SEKKAQINVL---LCELVRLYRDGM--PIKMSKRAG--DFIT---LRHV 413 R+E V+ V E K + + +LV L +G+ ++ K G +T L+ Sbjct: 440 RIEHVSFGVVLGEDKKKFKTRSGDVVKLVSLLDEGLRRSLETLKEKGRDKVLTAEELKAA 499 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 + V +++ L + + F F K+ E K N Y+ YAY R RSI R+A ++ Sbjct: 500 QESVAYGCIKYADLSHRRTNDYIFSFDKMLE-DKGNTAVYLLYAYTRIRSISRKA-EVLA 557 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 + + IP E E +L LA +P VI + + YLY++A+ F Sbjct: 558 ETLKEAAKTTSIPVEH---PKEWKLAKCLARFPEVISRTLDDLFIHGICDYLYEVANTFT 614 Query: 534 GHWS------HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++ + V RL L A A+I+ +I+G+ +M Sbjct: 615 EFYEVCYCIVKNKQTGEIESVDTG-------RLLLCEATAAIMAKCFDILGLHPVEKM 665 >gi|15616858|ref|NP_240071.1| arginyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681613|ref|YP_002467999.1| arginyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471299|ref|ZP_05635298.1| arginyl-tRNA synthetase [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11182438|sp|Q44683|SYR_BUCAI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|254782947|sp|B8D940|SYR_BUCA5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|25293287|pir||E84958 arginine-tRNA ligase (EC 6.1.1.19) [imported] - Buchnera sp. (strain APS) gi|10038922|dbj|BAB12957.1| arginyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219624456|gb|ACL30611.1| arginyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311087139|gb|ADP67219.1| arginyl-tRNA synthetase [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 574 Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 145/592 (24%), Positives = 244/592 (41%), Gaps = 82/592 (13%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 VI + GH N + ++ L P +A I+ IK + + GFIN Sbjct: 26 VITLNKKTKIGHYQLNNLIKIANISNLKPFELANRIILNIKKKYMYKEITFSQPGFINFL 85 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 ++P ++ + L I +S G N + + I++ S N MH+GH R ++GD +A Sbjct: 86 INPYWISEQLEKIFLSP-RLGINHVN-AQNIVIDYSSPNIAKEMHIGHLRSTIIGDVMAR 143 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKH-V 209 ++ F G+ V R +I D G Q L + + + L N+ L E YY K+ + Sbjct: 144 ILDFLGHNVIRANHIGDWGTQFGML---IAYLEVKKLVNSPLSLMKLEEYYCKAKKKYDI 200 Query: 210 GKELADK---YSSELLN---FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 + A+K Y +L N + W +V ++ KI + L +H + E Sbjct: 201 DQLFAEKSREYVVKLQNGDQYCYSIWKKLV-SITMLENCKIYKRLHVTLKKKHT--MGES 257 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323 +++ P +II++L + E K+ +T + K L G+ + Sbjct: 258 IYNKMLP----NIIEDLKNKKIAIE------KNGSTIVFLKEFKNRL------GEPMGVV 301 Query: 324 LLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 + K D + Y D+A K +Y+ D +IY S ++ L+A A N Sbjct: 302 IQKKDKGFLYSTTDIACLKYRYQVLHADRIIYYTDSRQHQHL--LQAWTIAKKALYISQN 359 Query: 383 VLLCELV---RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-------- 431 +LL + L +D P K R GD I L ++DE ++R + + N Sbjct: 360 LLLEHHIFGMMLSKDKRPFKT--RDGDTIKLSALLDEATERAMRLIKNKQPNLSKKKLNQ 417 Query: 432 -SELLDFDFCKVKEQSKE---NPVF--------------YVQYAYARCRSIFRQAKDIFP 473 S ++ K + SK N +F Y+QYAY R SI +++ Sbjct: 418 LSNIIGVGAVKYADLSKNRNTNYIFDWNEMLSFEGNTAPYIQYAYTRIVSILKKSNMPIK 477 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 L +F + +ESE + L + + E+ +I + P+ L YLY LA+ F Sbjct: 478 KLKEKIF----LTKESEIN-----LAIKILEFEEIILLISQKGTPHILCKYLYHLATSF- 527 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 SH EN + F + K RL+L A + GLN++G+ +M Sbjct: 528 ---SHFYENCSILFPKK--IKTCKSRLKLSILTAKTLKKGLNMLGIRVVKKM 574 >gi|52425385|ref|YP_088522.1| arginyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E] gi|81386992|sp|Q65SX3|SYR_MANSM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|52307437|gb|AAU37937.1| ArgS protein [Mannheimia succiniciproducens MBEL55E] Length = 576 Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 131/585 (22%), Positives = 228/585 (38%), Gaps = 87/585 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LGL+P A+ ++ ++ + + IAG GFIN++L+ +++ + Sbjct: 37 GDYQANGIMGAAKKLGLNPREFAQKVLEQVDLSDIAEKTEIAGPGFINIFLNKNWVAQ-Q 95 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + ++ +G T V I++ S N MHVGH R ++GD +A + F G V Sbjct: 96 ADTALNTPNFGIKTAHPQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARALEFMGNHVI 154 Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204 R ++ D G Q L L F+R + Y+ND + V Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHADAMQLSDLEAFYRAAKETYDNDEEFAVKARSYV 214 Query: 205 --------YLKHVGKELAD------KYSSELLNFP-EEKWLPIVKDYSVQAMMKIIRDDL 249 Y + + K+L D + + E LN EK ++ + M+ I +DL Sbjct: 215 VKLQSGDEYCRTMWKKLVDMTMQQNQRNYERLNVTLTEK--DVMGESLYNPMLPAIVEDL 272 Query: 250 K--ALNIQHD--IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 K L ++ D + + D+F D P+ I+ G++Y D Sbjct: 273 KKQGLAVEDDGALVVYLDEFKNKDGDPMGVIVQK-KDGGFLYTTTDIAAAKYRYHTLHAD 331 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365 R L+F T + + L + + Y + N ++G D + Sbjct: 332 RA-LVFSDTRQSQHMQQAWLITRKA--------GYVPDSFSLEHHNFGMMLGKDGKPFKT 382 Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425 R S ++ LL E V R + I A V++ V SV++ Sbjct: 383 R--------SGGTVKLADLLDEAVE--RATLLINEKNTALSEQEKAAVIEAVAIGSVKYA 432 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 L + + FD+ + + N Y+QYAY R RSIF + D+ P + Sbjct: 433 DLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNKT---------DVNPTALS 482 Query: 486 PQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH----GR 540 E + E L + L ++ ++ P+ L YLY+LA VF + H Sbjct: 483 AAHIEIRNDKERALAIKLLQFEEAVQTVAKDGTPHILCNYLYELAGVFSSFYEHCPILNA 542 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 E P + + RL+L + GL+++G+++ +M Sbjct: 543 EEP-----------VKLSRLKLAKLTEKTLKQGLDLLGIKTVEKM 576 >gi|332157706|ref|YP_004422985.1| arginyl-tRNA synthetase [Pyrococcus sp. NA2] gi|331033169|gb|AEC50981.1| arginyl-tRNA synthetase [Pyrococcus sp. NA2] Length = 629 Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 100/360 (27%), Positives = 161/360 (44%), Gaps = 50/360 (13%) Query: 9 SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68 ++K+ +KEI + + E ++ D +E G T A L+R L P+ IAE I Sbjct: 11 EKVKDIVKEIAPEWEGEVELKDTPSLE------FGDFGTPIAFKLARLLRKPPIQIAEEI 64 Query: 69 VARIKID-PDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIE 126 V R K + P+ G+IN +++ YL RK++ I+ +G + +G G KV +E Sbjct: 65 VERFKQELPEGIMDLKVVNGYINFFINYEYLARKLIEEILEKADRFGSSDLGHGKKVIVE 124 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY- 185 S NPT P+H+GH R A++GD +A ++ F GY V + YI+D G Q V+W Y Sbjct: 125 HTSVNPTKPLHMGHARNAILGDVMARILRFLGYTVEVQNYIDDLGVQFA----QVYWGYL 180 Query: 186 ----------QQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWL 230 + N + P + G+ V K++ DK L+ EE + Sbjct: 181 NLRDKFDEIMENLRKKNLKENPIDHALGLLYVEVNKKIEEDPEVDKEIRVLMKELEEGRV 240 Query: 231 PIVK--DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288 K + V+A M + L I++D+ + E D + + +I L + E Sbjct: 241 EGRKLAEDVVRAQM----ETTYRLGIKYDLLVWESDIVK---RRLFEIAVELLEKN---E 290 Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKY 345 P + K MD ++L D+ P L +SDG+ TY D+AY K+ Sbjct: 291 NFYVPEEGKYKGAFVMDLRKLF-------PDMKNPYMVLRRSDGTATYTGKDIAYHLWKF 343 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 75/133 (56%), Gaps = 9/133 (6%) Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 Y+QYA+ARC SI R+A+ +++ + E E +L++ L+++P ++E A Sbjct: 506 YIQYAHARCSSILRKARGQGIPIEWRVLLEKA--NFKEITEREKELLILLSKFPEIVEQA 563 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572 +P+ +A+Y +LAS+F+ + ++P L+ + + RL LV AV ++ + Sbjct: 564 GRDVKPHLIAWYANELASLFNKFYM---DHPVLKAEEG----IREARLLLVMAVKQVLRN 616 Query: 573 GLNIIGVESPNEM 585 L ++G+E+P +M Sbjct: 617 ALWLLGIEAPEKM 629 >gi|261867613|ref|YP_003255535.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412945|gb|ACX82316.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 577 Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 134/598 (22%), Positives = 237/598 (39%), Gaps = 112/598 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LG++P A+L++A+ ++ + IAG GFIN++L +L + + Sbjct: 37 GDYQANGIMPAAKKLGINPREFAQLVLAKAELQDIAEKTEIAGPGFINIFLKDGWLAENI 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + V + G + K T V +++ S N MHVGH R ++GD + + F G V Sbjct: 97 GN-AVKDSKLGIHHQDKQTVV-VDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNHVI 154 Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204 R ++ D G Q L L F+R + Y+ D E V Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHASEMELSDLEAFYRAAKKHYDEDPVFAEKARNYV 214 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 V + D+Y + W +VK M+ + + LN+ +D Sbjct: 215 ----VKLQSGDEYCRTM-------WQKLVK-----ITMQQNQHNYDRLNV---TLTEKDV 255 Query: 265 FHRGDPSP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD---V 320 +P + I++ L +QG E D +++ D + Sbjct: 256 MGESLYNPMLPGIVEGLKKQGLAVED---------------DGAWVVYLDEFKNKDGGPM 300 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG-SDHSGYVKRLEAVAAAVSEKKA 379 + K DG + Y D+A K +YE N V + S ++++ A ++ K Sbjct: 301 GVIVQKKDGGFLYTTTDIAAAKYRYETLKANRALVFSDTRQSQHMQQ----AWLITRKAG 356 Query: 380 QI-NVLLCEL----VRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 + + E + L +DG P K R+GD + L ++DE Sbjct: 357 YVPDSFQLEHKNFGMMLGKDGKPFKT--RSGDTVKLADLLDEAIERAGVLISQKSTALSE 414 Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467 VG SV++ L + FD+ + + N Y+QYAY R RSIF + Sbjct: 415 QEKADVIEAVGIGSVKYADLSKNRITDYVFDWDNMLS-FEGNTAPYMQYAYTRIRSIFNR 473 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 ++ I P + P + ++ E L + L ++ I+ P+ L YLY+ Sbjct: 474 SQ-ISPG-EVKQAPLTLTNEK------ERALAIKLLQFEEAIQLVAKDGTPHILCAYLYE 525 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA VF + H + ++++ + RL+L + GL+++G+++ M Sbjct: 526 LAGVFSSFYEH------CPILNNEDQQVKLSRLKLALLTERTLKQGLDLLGIKTIERM 577 >gi|313157972|gb|EFR57378.1| arginine--tRNA ligase [Alistipes sp. HGB5] Length = 593 Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 140/589 (23%), Positives = 240/589 (40%), Gaps = 124/589 (21%) Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 I E + A + P+V S F KGF+NL L ++ + I +G+ G V Sbjct: 62 IGEYMTANV---PEVKS-FNVIKGFLNLTLDCAFWAARFAEIAADA-NFGQ-APDTGRTV 115 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 IE+ S N P+H+GH R ++G ++A ++ +G+ V + +ND G I L+ W Sbjct: 116 MIEYSSPNTNKPLHLGHIRNNLLGYSVAQILRANGHNVIKANLVNDRGIHICKSMLA--W 173 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGK-----------------------ELADKYSSE 220 + LY N G +L VGK E A K + Sbjct: 174 K----LYGNGETPASSGMKGDHL--VGKYYVEFDKHYKAQIKELTAQGQTEEEAKKNAPV 227 Query: 221 LLNFPE--EKWLPIVKDYSVQAMMKIIRD--------DLKALNIQHD-IFISEDDFHRGD 269 +L E KW KD V ++ + + KAL + D I+ + G Sbjct: 228 MLEAQEMLRKWE--AKDPEVYSLWETMNGWVYEGFDVTYKALGVDFDKIYYESQTYLLG- 284 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + +++ R+G Y D + T G D ++ LL+ DG Sbjct: 285 ----KSLVEEGLRKGVFYR---------------RDDNSVWIDLTADGLD-EKLLLRGDG 324 Query: 330 SYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLC 386 + Y DL ++E D+MIYV+G++ + + + L+ + + ++ I L Sbjct: 325 TSVYMTQDLGTAYRRFEENRLDDMIYVVGNEQNYHFQVLKLILKKLGYADWSDHITHLSY 384 Query: 387 ELVRL------YRDGMPIKMSKRAGDFI-TLRHVVDEVG---------SDSVRFMMLWRK 430 +V L R+G + D + T R + DE+G +D+V M+ Sbjct: 385 GMVELPEGKMKSREGTVVDADDLIADMVSTAREMSDELGKLDGCTEEEADAVSTMV---- 440 Query: 431 NSELLDFDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLD 476 L + +K K+ +F ++QY +AR S+ R+A + +D Sbjct: 441 --GLGALKYFILKVDPKKTMLFDPRESIDFNGNTGPFIQYTHARICSVLRKAAE--AGID 496 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 F ++++ E+ L+ L EYP V+ A P + Y+Y+LA F+G++ Sbjct: 497 FS------GAAQADYLPEEIALVKSLTEYPSVVAAAGENFAPSIVGAYVYELAKQFNGYY 550 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H ++ N + MRLQL VA +I SG+ ++G++ P M Sbjct: 551 -HDHS-----ILKEENDETRRMRLQLAQQVARVIRSGMKLLGIDVPERM 593 >gi|325913394|ref|ZP_08175761.1| arginine--tRNA ligase [Lactobacillus iners UPII 60-B] gi|325477320|gb|EGC80465.1| arginine--tRNA ligase [Lactobacillus iners UPII 60-B] Length = 558 Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 142/601 (23%), Positives = 251/601 (41%), Gaps = 115/601 (19%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IERP++ G + L++ +P IA + A++ D + V + +IN Sbjct: 25 LIERPKNVKLGDYAF-PTFALAKIEHKNPAVIASELTAKLVNDNFAEIVAVGP--YINFA 81 Query: 93 LSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + L + L ++ +YG +G V I+ S N PM +GH R V+G+++A Sbjct: 82 IDHAKLVSVTLKKVLADQDKYGDQDTNQGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVY----- 205 ++ G+ + Y+ D G Q L + W ++A+ + YY + Sbjct: 141 KILQKIGFTPIKINYLGDYGTQFGKLITAYKLWGNEEAVKKDPITNLFHYYVKFHEEAEK 200 Query: 206 ---LKHVGK------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 L+ G+ E D + EL +W ++ S++ +I K L + Sbjct: 201 DPKLEDEGRAWFKKLEEGDAEAVELW-----QWF---REVSLEEFNRI----YKELGVTF 248 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D + E F+ ++ ++D L + ++E S+ Q D+D Sbjct: 249 DSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQVVDLD----------- 286 Query: 317 GDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372 DD + L LKSDG+ Y DLA Y K +Y+ F +YV G++ SG+ K+L+ V Sbjct: 287 -DDENPALILKSDGTSLYITRDLAAALYRKKEYD--FAMSLYVAGNEQSGHFKQLKQVLG 343 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL---------------------- 410 + Q ++ + ++G K+S R G+ + L Sbjct: 344 KMG-YDWQKDIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVKLALEQIEAKNPNL 400 Query: 411 ---RHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSI 464 V +VG +V F L KN L +FDF V+ + P YVQY AR +SI Sbjct: 401 ANKEQVAHQVGVGAVIFHDL--KNERLDNFDFNLNEVVRFEGDTGP--YVQYTNARAQSI 456 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R+A D L D + +A++P +I+ A EP +A Y Sbjct: 457 LRKANVAIDDTKLAL-----------SDDWAFAVAKDIADFPAIIQKAFEKFEPSVIAKY 505 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 +L+ F+ ++++ +R + ++ RL LV A + ++ L ++GV++P E Sbjct: 506 SLNLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESLRLLGVDAPKE 557 Query: 585 M 585 M Sbjct: 558 M 558 >gi|257884328|ref|ZP_05663981.1| arginyl-tRNA synthetase [Enterococcus faecium 1,231,501] gi|257820166|gb|EEV47314.1| arginyl-tRNA synthetase [Enterococcus faecium 1,231,501] Length = 563 Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 137/596 (22%), Positives = 256/596 (42%), Gaps = 102/596 (17%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P+ HG ++ A L++ P IA + +I + + + + G ++N + Sbjct: 27 LLENPKSAEHGDVAF-PAFSLAKVYRKAPQQIAADLAEKID-SANFEKIEVVGP-YLNFF 83 Query: 93 LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 ++ + K+L ++V YG + IG V I+ S N P+ +GH R V+G+++ Sbjct: 84 MNKELISEKVLQTVVKEKEHYGDSNIGNQGTVPIDMSSPNIAKPISMGHLRSTVIGNSIG 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +M GY+ R ++ D G Q L ++ W ++A+ P +Y++ Sbjct: 144 FIMEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEEAVKAE----PINELLRLYVQF-- 197 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 E+A+ + LN W +++ +A + + RD+ +K N +D+ D Sbjct: 198 HEVAE--TEPELNEEARAWFKRLEEGDEEAIQLWQWFRDESMKEFNKIYDLLEVRFDSLN 255 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + +I+ L + + E K + D+ L P Sbjct: 256 GEAFYNDKMDEIVKLLEEKHLLNE-------DKGAEIVDLSAYDL------------NPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370 L KSDG+ Y DLA Y K Y+ F +YV+G++ S + K+L+AV Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FKQSLYVVGNEQSYHFKQLKAVLKEMGFDWS 354 Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 +S +K +I VLL E++ ++S++ D V + Sbjct: 355 DDMHHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAIQSAKEQISEKNPDLENKDAVAKQ 413 Query: 417 VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +V F L KN L FDF V+ + + P YVQY +AR S+ +A Sbjct: 414 VGVGAVIFHDL--KNDRLNTFDFNLEEVVRFEGETGP--YVQYTHARAVSLLEKA----- 464 Query: 474 DLDFDLFPRNVIPQESE----FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 +P E+ D + +++ + +YP + +A EP +A + LA Sbjct: 465 ---------GFVPSETADYALNDDTSWEVVKLVQKYPETVLSAGEKYEPSVIAKHAIKLA 515 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ +++H + + A++ + RL LV+AV ++ L ++G+ +P++M Sbjct: 516 QAFNKYYAHTK-------ILADDEQ-KEARLALVYAVTVLLKEDLRLLGLHAPDKM 563 >gi|257066823|ref|YP_003153079.1| arginyl-tRNA synthetase [Anaerococcus prevotii DSM 20548] gi|256798703|gb|ACV29358.1| arginyl-tRNA synthetase [Anaerococcus prevotii DSM 20548] Length = 565 Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 135/582 (23%), Positives = 233/582 (40%), Gaps = 111/582 (19%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF-----INLYLSPSYLRKILSSIVV 107 L++ L +P IAE + +D GF +N YL+ RK+ ++ Sbjct: 46 LAKTLRKNPAIIAEDLAKGFDLD-----------GFEKIENLNAYLNFYVDRKVFEEEIL 94 Query: 108 SGIE-----YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 I YG + G G + I+F S N P H+GH R V+GD L ++ F GY Sbjct: 95 KEILEKKEKYGSSDKGNGKNIVIDFSSVNIAKPFHIGHIRSTVIGDALRNIHDFLGYNTI 154 Query: 163 REYYINDAGAQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK-----ELADK 216 YI D G Q T+ A W ++ L N P +Y+++ + ++ D+ Sbjct: 155 ASNYIGDYGTQFGTMIAAYKLWGDEEKLKEN----PIKELLALYVRYNSEAANDEKMMDE 210 Query: 217 YSSELLNFP--EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274 +E +N EE+ + K + + + R K L+I D + E +H I Sbjct: 211 ARAEFMNLENGEEEATRLWKHFKEISFNEFDRV-YKMLDIDFDNYNGES-YH---SEFIP 265 Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSY 331 D+++ L + + E S D+ + D P ++KS+GS Sbjct: 266 DVLEELKEKNLLVE-------SDGAYIVDLS-------------EFDLPPAIIIKSNGSS 305 Query: 332 TYFAADLAY-FKCKYERGFDNMIYVMGSDHSGYVKRLEAVA------------------- 371 Y D+A K FD +YV+ + + + ++L A+ Sbjct: 306 AYITRDIATAINRKKVYDFDKNLYVVATQQNLHFQQLFAILKLMGYDFYDDCKHIPFGMV 365 Query: 372 ----AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 +S +K Q+ V L +++ D M R + V + VG +V+F L Sbjct: 366 SLKDQTLSTRKGQV-VFLEDVLNKAIDKTKEIMENRDSKIENVGEVAEIVGIGAVKFQEL 424 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487 + + FD+ +V E YVQY YAR +S+ R+A F N Sbjct: 425 YNNRIKDYVFDWDEVLNFDGETGP-YVQYTYARAKSVLRKAD----------FKENT--- 470 Query: 488 ESEFDT----SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 E FD E L+ L + V+ A EP + +L ++A F+ ++ + Sbjct: 471 EISFDNITSDEEFALVKALGNFKDVVAKAAEKYEPSLITRHLTEIAKNFNKFYNACQ--- 527 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + K+ RL L +A + +I +GL ++G+++ +M Sbjct: 528 ----INVEDEKIKEERLALSYATSIVIKTGLGLLGIKTVEQM 565 >gi|325186294|emb|CCA20800.1| arginyltRNA synthetase putative [Albugo laibachii Nc14] Length = 652 Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 145/600 (24%), Positives = 249/600 (41%), Gaps = 106/600 (17%) Query: 47 TNAAMIL--SRPL-GLDPLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKIL 102 +N A+IL S P L P IA ++ + +P + + ++ GF+N L +L + + Sbjct: 98 SNIALILAHSSPYNALQPSEIAHKLLENLPSEPRILQAASVSPAGFLNFTLCDRFLARFV 157 Query: 103 SSIVVSG----IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158 + E R+++ ++F S N +HVGH R +V+GDT+ +L+ + G Sbjct: 158 HEMASHNEPQHSEESRSIL-------VDFASPNYGKKLHVGHLRSSVIGDTICNLLEYRG 210 Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQ-ALYNNDSDLPEGYYPGVYL----KHVGKEL 213 ++V R + D G+ + TL S+ + AL NDS L Y G K G Sbjct: 211 HKVARVSHSGDLGSAMATLLASIVTEKESYALMRNDSQLAAMYERGKMQLARDKTGGFTS 270 Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273 K+ LL PE +D + AM + H +S+D + R + Sbjct: 271 LVKHIVLLLQQPENPSSTFHRD--ILAMWR------------HICALSQDSYQRIFER-L 315 Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ---LLFRSTMVGDDVDRPLLKSDGS 330 ++N Y+ ++ P + + R Q +F S + + R K DG Sbjct: 316 NVSVENRPESSYIR--MIHPVLEDLKSRGIITRSQGADCIFVSPQLPPLIVR---KKDGG 370 Query: 331 YTYFAADLAYFKCKY------ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE-----KKA 379 + Y DLA C+ ++ +IYV S + ++L +AA +E K Sbjct: 371 FLYATIDLACLYCRLFGSEIDATRYNEIIYVTDQSQSLHFQQL-FLAAQRAEWIGKSSKV 429 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD------------------------ 415 +++ + LV L DG K+S R G F L ++D Sbjct: 430 ELHHVAFGLV-LGSDGS--KLSSRNGAFDYLEDLLDTAAIECQNRSILPSNELEKRAGKE 486 Query: 416 ---EVGSDSVRFMMLWRKNSELLDFDFCKVKEQS-KENPVFYVQYAYARCRSIFRQAKDI 471 +G +VR+ L ++ + D+ F + S K N Y+ YA AR I R+ + Sbjct: 487 LFCRIGDAAVRYFELSQQRTR--DYKFTWDQALSFKGNTGVYLLYACARLEGILRK---L 541 Query: 472 FPDLDFDLFPRNVIPQE------SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 +LD+++ R +E + + +SE L + LA+ + AT P+ L YL Sbjct: 542 HQELDYEVLSREKSTKELLTASSAHWQSSERALALILAQMEDEVSTATTHLTPHTLCEYL 601 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 Y +AS FH + E+ R+ V +L + L I+ GL+++G+E + M Sbjct: 602 YRVASHFHAFY----EDCRVVGVPEMEARLCLCAL-----TWKILTRGLHLLGIEPVDRM 652 >gi|257867704|ref|ZP_05647357.1| arginyl-tRNA synthetase [Enterococcus casseliflavus EC30] gi|257874031|ref|ZP_05653684.1| arginyl-tRNA synthetase [Enterococcus casseliflavus EC10] gi|257801787|gb|EEV30690.1| arginyl-tRNA synthetase [Enterococcus casseliflavus EC30] gi|257808195|gb|EEV37017.1| arginyl-tRNA synthetase [Enterococcus casseliflavus EC10] Length = 563 Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 138/596 (23%), Positives = 251/596 (42%), Gaps = 102/596 (17%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P+ HG ++ A L++ P IA + +I + + + G ++N + Sbjct: 27 LLENPKSADHGDVAF-PAFSLAKVYRKAPQQIAADLAEKID-QASFEKIEVVGP-YLNFF 83 Query: 93 LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + +L ++ +G IG V I+ S N P+ +GH R V+G+++ Sbjct: 84 MDKKAISAHVLEMVLKEKNHFGDQTIGNQQAVPIDMSSPNIAKPISMGHLRSTVIGNSIG 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNND-SDLPEGYYPGVYLKHV 209 ++ GY+ R ++ D G Q L ++ W ++A+ ++L Y Sbjct: 144 FILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEEAVKAEPINELLRLYVDFHEAAET 203 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAM--MKIIRDD-LKALNIQHDIFISEDDFH 266 K+L D + W ++D +AM + RD+ LK N +D+ E F Sbjct: 204 DKQLEDDARA---------WFKKLEDGDQEAMDLWQWFRDESLKEFNKIYDML--EVSF- 251 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD----- 321 D+L + + K T+ ++ ++ L + + VD Sbjct: 252 -----------DSLNGEAFY--------NDKMTEVVELLEEKHLLKEDQGAEIVDLAAYD 292 Query: 322 -RPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV----- 370 P L KSDG+ Y D+A Y K Y F +YV+G++ S + K+L+AV Sbjct: 293 LNPALIRKSDGATLYITRDMAAALYRKRTY--NFAKSLYVVGNEQSYHFKQLKAVLKEMG 350 Query: 371 ------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412 +S +K +I VLL E++ D +++++ Sbjct: 351 FEWADDMTHVPFGLITKDGKKLSTRKGKI-VLLEEVLNEAIDSAKEQITEKNPTLENKEE 409 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAK 469 V +VG +V F L KN L +FDF V+ + + P YVQY++AR SI +A Sbjct: 410 VAKQVGVGAVVFHDL--KNDRLNNFDFTLEEVVRFEGETGP--YVQYSHARAMSILEKA- 464 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 DFD + S DT ++I + YP + A EP +A + LA Sbjct: 465 ------DFD---PAAVSSLSLADTESWEVIKLIQRYPETVLQAAEKYEPSVIAKHAIKLA 515 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ ++++ ++ + + K RL LV+AV +++ L ++G+ +P++M Sbjct: 516 QAFNKYYAN------VKILAEDAEKDA--RLALVYAVTTLLKEDLRLLGLHAPDKM 563 >gi|62184813|ref|YP_219598.1| arginyl-tRNA synthetase [Chlamydophila abortus S26/3] gi|81313008|sp|Q5L6U4|SYR_CHLAB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|62147880|emb|CAH63627.1| putative arginyl-tRNA synthetase [Chlamydophila abortus S26/3] Length = 562 Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 147/587 (25%), Positives = 232/587 (39%), Gaps = 106/587 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH N AM L+R L + P IAE IV +I + + S+ IAG GFIN S +L L Sbjct: 38 GHYQCNDAMKLARTLKMPPRAIAESIVKQISKN-NFSSIEIAGAGFINFTFSKEFLNLSL 96 Query: 103 SSIVVSGIEYGRNL-----IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 S Y R+L + KV I+F S N MHVGH R ++GD LA + F Sbjct: 97 QS-------YSRDLSSGFRVQDPKKVVIDFSSPNIAKDMHVGHLRSTIIGDCLARIFTFV 149 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217 G++V R +I D G A + Y Q + D + E +L Y Sbjct: 150 GHDVLRLNHIGDWGT-----AFGMLITYLQEESSEDIESLE-------------DLTILY 191 Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDI 276 + F E+ K S ++ + D KA + I ISE F + I +I Sbjct: 192 KKAHVRFAEDAEF---KKRSQTNVVALQSGDPKARKLWERICEISERAFQK-----IYNI 243 Query: 277 ID-NLARQG-YVYEGILPPPKSKTTQKCDMDRKQLLFRS----TMVGDDVDRPLL--KSD 328 +D + ++G Y LP D+++K L+ S + + PL+ K D Sbjct: 244 LDIQIEKRGESFYNPFLPEIIE------DLEKKNLITVSDEAKCVFHEGFSIPLMVQKRD 297 Query: 329 GSYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387 G Y Y DLA + + E+ D +I V S + + LEA A A + +V Sbjct: 298 GGYNYATTDLAAMRYRVEQDHADRIIIVTDMGQSLHFQLLEATALAAGYLPNK-DVFSHV 356 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420 L D K R+G+ I L+ ++D +G + Sbjct: 357 GFGLVLDSEGKKFKTRSGENIKLQELLDTAIDQAVATLKKHRPEMSDAEITERAPVLGMN 416 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 ++++ L F F K+ + + N ++ Y Y R + I R+ L + Sbjct: 417 AIKYADLSSHRVSDYVFSFEKML-RFEGNTAMFILYGYVRIQGIKRR-------LGIEKL 468 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW--SH 538 E SE L + L +P I+ P+ L YLY L + FH + H Sbjct: 469 SLESAANIQE--PSEEALALALLRFPEAIDITLKELCPHFLTDYLYMLTNKFHAFFRDCH 526 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +P + RL L V + +G++++G+++ + + Sbjct: 527 IEGSPHQK-----------ERLYLCALVEKTLATGMHLLGLQTLDRL 562 >gi|240112733|ref|ZP_04727223.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae MS11] gi|268598798|ref|ZP_06132965.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae MS11] gi|268582929|gb|EEZ47605.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae MS11] Length = 572 Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 127/590 (21%), Positives = 242/590 (41%), Gaps = 88/590 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L +L + + + ++ +G + V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRHEFLAQNIHA-ALNDARFGVAKTAQPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ F+G V R+ ++ D G Q L V + +Q N +L Sbjct: 144 RVLEFTGNTVIRQNHVGDWGTQFGML---VAYLVEQQKDNAAFELA-------------- 186 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 +L Y + + F E+ P D + + ++K+ D L + D Sbjct: 187 DLEQFYRAAKVRFDED---PAFADTAREYVVKLQGGDETVLALWKQFV----DISLSHAQ 239 Query: 272 PIRDIIDNLARQGYV-----YEGILPPPKSKTTQK---CDMDRKQLLFRSTMV---GDDV 320 + D + R V Y L P QK + D +++F G+ Sbjct: 240 AVYDTLGLKLRPEDVAGESKYNDDLQPVADDLVQKGLAVEDDGAKVVFLDEFKNKEGEPA 299 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEK 377 + K G + Y + DLA + + R D ++YV+ + + ++L + A + Sbjct: 300 AFIVQKQGGGFLYASTDLACLRYRVGRLKADRLLYVVDHRQALHFEQLFTTSRKAGYLPE 359 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416 A+ + + + +DG P K R+GD + L ++ E Sbjct: 360 NAKAEFIGFGTM-MGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEA 416 Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 VG +V++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 417 AKIGKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG- 474 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 ++D V+ + E QL L ++ V+++ P+ LA YLY A+ Sbjct: 475 -----EWDATAPTVLTE-----PLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQAAT 524 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 +F + P L+ A+ RLQL + + GL+++G++ Sbjct: 525 LFSRFY---EACPILKAEGASRNS----RLQLAKLTGNTLKQGLDLLGID 567 >gi|303243692|ref|ZP_07330033.1| Arginine--tRNA ligase [Methanothermococcus okinawensis IH1] gi|302485934|gb|EFL48857.1| Arginine--tRNA ligase [Methanothermococcus okinawensis IH1] Length = 228 Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 58/159 (36%), Positives = 89/159 (55%), Gaps = 7/159 (4%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSV--FIAGK 86 ++ I +E P G STN A L++ L P+ IAE I +K + +++ + A Sbjct: 25 METIRLEEPPSLNLGDYSTNIAFRLAKLLKKSPMVIAEEIANSLKSE-NIEGIKDIKAVN 83 Query: 87 GFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 G+IN +L+ SY +K + I+ +G+ K K+ +E SANP GP+H+GH R A+ Sbjct: 84 GYINFFLNYNSYSKKGVKKILNEKDNFGKGE-EKNKKIILEHTSANPNGPLHIGHSRNAI 142 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQ--INTLALSVF 182 VGD+L ++ F+GY V +YY+ND G Q I LS F Sbjct: 143 VGDSLKRVLEFAGYNVETQYYVNDMGRQEAIVVFGLSKF 181 >gi|167748068|ref|ZP_02420195.1| hypothetical protein ANACAC_02812 [Anaerostipes caccae DSM 14662] gi|167652060|gb|EDR96189.1| hypothetical protein ANACAC_02812 [Anaerostipes caccae DSM 14662] Length = 563 Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 137/576 (23%), Positives = 246/576 (42%), Gaps = 98/576 (17%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIE 111 LS+ P IA+ + +IK D S A ++N ++ + ++ ++L + V Sbjct: 43 LSKIFRKAPNIIAQEVAEKIK-KTDFVSKTAAMGPYVNFFIDRTMFVSEMLKQVSVDN-- 99 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG + IG G + I++ S N HVGH R ++G+++ + GY V R ++ D G Sbjct: 100 YGSSEIGCGKTICIDYSSPNVAKNFHVGHLRTTLIGNSIYRIYKKLGYRVERINHLGDWG 159 Query: 172 AQINTLALSV-FWRYQQALYNND-SDLPEGYYPGVYLK-HVGKELADKYSSEL------L 222 Q L ++ W ++A+ N S+L + +Y+K H E D + E + Sbjct: 160 TQFGKLIVAYKKWGSKEAVEQNGISELMK-----IYVKFHEEAEKDDTLNDEARAWFVKM 214 Query: 223 NFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279 +E+ L I KD S+ +I + L++ D + E F+R S ++D Sbjct: 215 EQGDEEALSIWEWFKDISLIEYKRI----YELLDVDFDSYAGE-SFYRDKTSA---VVDE 266 Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339 L ++G + E S+ D+++ D ++K DGS Y DLA Sbjct: 267 LKKKGMLKE-------SEGAFIVDLEKY----------DMTPCLIMKKDGSSIYATRDLA 309 Query: 340 ---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396 Y K Y+ F+ IYV G + + ++ V + + A+ +++ + +G Sbjct: 310 AIFYRKKTYD--FEKCIYVTGMEQKLHFAQVFKVVELMGYEWAKTDLIHVPYGLVSLEGG 367 Query: 397 PIKMSKRAGDFITLRHVVDE-------------------------VGSDSVRFMMLWRKN 431 K+S R+G+ I ++ E VG ++ F L+ + Sbjct: 368 --KLSTRSGNIIYAEDILRESVSKIKEVINDKNPDLQDKEEVAKMVGIGAIIFNDLYNQR 425 Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA--KDIFPDLDFDLFPRNVIPQES 489 + + F + K+ E YVQY YAR S+ R+ D+ ++D L Sbjct: 426 IKDVTFSWDKIHSFDGETGP-YVQYTYARAASVLRKTGITDVPEEIDSSLLT-------- 476 Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549 D + + L+ L +P V+E A EP +A ++ +A F+ H+ H EN Sbjct: 477 --DEASVSLLKELIRFPEVVETAAERLEPSVVARFVMSVAQAFN-HFYH--ENQ----CN 527 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + KL R++LV I GL+++G++ P +M Sbjct: 528 VEDEKLKRARVKLVIIAKKAIKDGLDLLGMKCPEQM 563 >gi|168186728|ref|ZP_02621363.1| arginyl-tRNA synthetase [Clostridium botulinum C str. Eklund] gi|169295327|gb|EDS77460.1| arginyl-tRNA synthetase [Clostridium botulinum C str. Eklund] Length = 563 Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 145/585 (24%), Positives = 243/585 (41%), Gaps = 117/585 (20%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIE 111 L++ P IAE + +I + + V + G ++N ++ L IL+ ++ G + Sbjct: 44 LAKTFRKAPNMIAEELSEKINKEG-FEKVVVLGP-YLNFFMDKGSLTYDILNRVLEEGDK 101 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG + +GKG V I++ S N P HVGH +G+ L ++ F GY ++ D G Sbjct: 102 YGSSEVGKGKNVTIDYSSPNIAKPFHVGHLFSTSIGNALYRMLNFEGYNSIGINHLGDWG 161 Query: 172 AQINTLALSVF--WRYQQALYNNDSDLPEGYYPGVYLK-HVGKE----LADK---YSSEL 221 Q L +S + W ++AL + P +Y+K H E L D+ Y +L Sbjct: 162 TQFGKL-ISAYKRWSDEKALEKD----PIKELLRIYVKFHDEAEKDPSLEDEGRMYFKKL 216 Query: 222 LNFPEEK---WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 + +E+ W K S++ K+ L ++ D + E ++ I++I D Sbjct: 217 EDGEKEEVELW-ERFKTLSLKEFEKV----YDTLGVKFDSYAGESFYNDKMDDVIKEIDD 271 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP--LLKSDGSYTYFAA 336 +GIL + M+ +D P ++K DG+ Y Sbjct: 272 ---------KGILVESNGA--------------KVVMMDEDNIPPCIIVKGDGATIYATR 308 Query: 337 DLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLY 392 DLA Y K Y+ F IYV+GSD S + K++ + A + LVR Sbjct: 309 DLAAAFYRKKNYD--FYKSIYVVGSDQSLHFKQVFKTIEKMGYDWAHDCKHVAFGLVRF- 365 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD------------FC 440 K+S R G I L +++E S ++ ++ KN EL + + F Sbjct: 366 ---ADKKLSTRKGQVIFLEDLLNESVSKTLE--VINEKNPELENKEEVAKKVGIGAVIFT 420 Query: 441 KVKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 +K + +++ VF YVQY YAR +SI R+A +I ++++ Sbjct: 421 YLKNKREKDIVFNWSEMLNFEGETGPYVQYTYARGKSILRRAGEIGEEVNYGALN----- 475 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 E +L+ L I NA EP L Y+ ++A F+ + Sbjct: 476 -----SKEEFELVKVLGNLEESILNAIDKLEPSILTRYIIEVAKAFN------------K 518 Query: 547 FVQANNRKLTM------MRLQLVHAVASIINSGLNIIGVESPNEM 585 F A+N T RL+LV A +I +GLN++G+E +M Sbjct: 519 FYNAHNIMATEDVATKNARLKLVEATCQVIKNGLNLLGIEVVEKM 563 >gi|315653179|ref|ZP_07906104.1| arginine--tRNA ligase [Lactobacillus iners ATCC 55195] gi|315489544|gb|EFU79181.1| arginine--tRNA ligase [Lactobacillus iners ATCC 55195] Length = 558 Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 142/601 (23%), Positives = 252/601 (41%), Gaps = 115/601 (19%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IERP++ G + L++ +P IA + A++ D + V + +IN Sbjct: 25 LIERPKNVKLGDYAF-PTFALAKIEHKNPAVIASELAAKLVNDNFAEIVAVGP--YINFA 81 Query: 93 LSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + L + L ++ +YG +G V I+ S N PM +GH R V+G+++A Sbjct: 82 IDHAKLVSVTLKKVLADQDKYGDQDNNQGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVY----- 205 ++ G+ + Y+ D G Q L + W ++A+ + YY + Sbjct: 141 KILQKIGFTPIKINYLGDYGTQFGKLITAYKLWGNEEAVKKDPITNLFHYYVKFHEEAEK 200 Query: 206 ---LKHVGK------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 L+ G+ E D + EL +W ++ S+Q +I ++ L + Sbjct: 201 DPKLEDEGRAWFKKLEEGDAEAVELW-----QWF---REVSLQEFNRIYKE----LGVTF 248 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D + E F+ ++ ++D L + ++E S+ Q D+D Sbjct: 249 DSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQVVDLD----------- 286 Query: 317 GDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372 DD + L LKSDG+ Y DLA Y K +Y+ F +YV G++ SG+ K+L+ V Sbjct: 287 -DDENPALILKSDGTSLYITRDLAAALYRKKEYD--FAMSLYVAGNEQSGHFKQLKQVLG 343 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL---------------------- 410 + Q ++ + ++G K+S R G+ + L Sbjct: 344 KMG-YDWQKDIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVKLALEQIEAKNPNL 400 Query: 411 ---RHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSI 464 V +VG +V F L KN L +FDF V+ + P YVQY AR +SI Sbjct: 401 ANKEQVAHQVGVGAVIFHDL--KNERLDNFDFNLNEVVRFEGDTGP--YVQYTNARAQSI 456 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R+A D L D + +A++P +I+ A EP +A Y Sbjct: 457 LRKANVAIDDTKLAL-----------SDDWAFAVAKDIADFPAIIQKAFEKFEPSVIAKY 505 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 +L+ F+ ++++ +R + ++ RL LV A + ++ L ++GV++P E Sbjct: 506 SLNLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESLRLLGVDAPKE 557 Query: 585 M 585 M Sbjct: 558 M 558 >gi|229827434|ref|ZP_04453503.1| hypothetical protein GCWU000182_02823 [Abiotrophia defectiva ATCC 49176] gi|229788372|gb|EEP24486.1| hypothetical protein GCWU000182_02823 [Abiotrophia defectiva ATCC 49176] Length = 603 Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 132/609 (21%), Positives = 257/609 (42%), Gaps = 102/609 (16%) Query: 36 RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD---VDSVFIAGKGFINLY 92 RP C + N AM ++ PL IA+ + ++++ + + + GFINL Sbjct: 38 RPDLCQY---QCNGAMAAAKEFKKAPLFIADEVADKLQLSEEGKIFEKIEAVNPGFINLT 94 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L +L ++ + +G +G G+ K+ +++ N P+HVGH R A++G+++ Sbjct: 95 LKDEFLADYVNEMGETG-NFGYENGGEPKKIVLDYGGPNVAKPLHVGHLRPAIIGESIKR 153 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-------DLP------EG 199 + F+G EV + ++ D G + + V R+ + Y ++S + P E Sbjct: 154 IERFAGNEVIGDVHLGDWGLPMGLIITEVRHRHPELPYFDESFTGEYPKEAPFTIEELEE 213 Query: 200 YYPGVYLKHVGKELADKYSSE------LLNFPEEKWLPI---VKDYSVQAMMKIIRDDLK 250 YP L + + ++Y +E LL ++ + + D SV + K + Sbjct: 214 IYP---LASIKSKEDEEYKNEALQATALLQNGNRGYMALWHHILDVSVTDLKK----NYH 266 Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310 +N+ D++ E D P D+++ + G+ Y + L+ Sbjct: 267 NINVSFDLWKKESDVQVYIP----DMVEKMKADGFAY----------------ISEGALV 306 Query: 311 FRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYERGFD--NMIYVMGSDHSGYVK 365 T D + P +LKSDG+ Y D+A + + F+ ++IYV+ + + Sbjct: 307 VDVTKEDDKKEIPPCIILKSDGAALYSTTDVATI-LERVKLFNPTDIIYVVDKRQGMHFE 365 Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 ++ ++N++ + +DG P K R G + L ++ E+ ++ V Sbjct: 366 QVFRTVKKTGIAPEELNLIFLGFGTMNGKDGKPFKT--REGGVMRLERLISEI-TEEVEA 422 Query: 425 MMLWRKNSE-----------LLDFDFCKVKEQSKENPVF--------------YVQYAYA 459 M R E L + + Q+ ++ VF Y+QY Sbjct: 423 KMSDRDMDEEVKHKVAKQVGLAALKYGDLSNQASKDYVFDLERFTSFEGNTGPYIQYTVV 482 Query: 460 RCRSIFRQ--AKDIFPDLDFDLFPRNV-IPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 R RSI + A+ D D F ++ + + + EL+L+ LA++ +I+ A Sbjct: 483 RIRSILDKFIAEKSLNKADLDNFFADIKLVKAATASERELELV--LAKFSDMIDLAATEF 540 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 P+K+ Y+Y++++ F + EN L Q RK +M++L + II L++ Sbjct: 541 APHKVCAYIYEVSNCFSAFY---HENHILN-EQDEARKYSMLKLSYI--TEKIIVKCLDL 594 Query: 577 IGVESPNEM 585 +G+E+P M Sbjct: 595 LGIEAPERM 603 >gi|22298368|ref|NP_681615.1| arginyl-tRNA synthetase [Thermosynechococcus elongatus BP-1] gi|34222744|sp|Q8DKN4|SYR_THEEB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|22294547|dbj|BAC08377.1| arginyl-tRNA-synthetase [Thermosynechococcus elongatus BP-1] Length = 584 Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 138/582 (23%), Positives = 235/582 (40%), Gaps = 87/582 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G +N + L++ LG P +A+ +V ++++ V IAG GF+N L P +L L Sbjct: 39 GDYQSNVCLSLAKQLGKAPRELAQEVVPHLEVEDLCQPVEIAGPGFLNFRLKPEFLAATL 98 Query: 103 SSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 + S GI R + +V ++F S N MHVGH R ++GD +A ++ F G+ Sbjct: 99 QAARGSDRLGIPPAR----EPRRVVVDFSSPNIAKEMHVGHLRSTIIGDCIARILEFQGH 154 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYN-NDSDLPEGYYPGVYLKHVGKELADKYS 218 V R ++ D G Q L + Y AL N DL + L K+ ++ Sbjct: 155 TVLRLNHVGDWGTQFGMLIAYLDEVYPDALTTANALDLGD-------LVTFYKKAKQRFD 207 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 S+ PE + K ++Q + R + L Q S +F + I D++D Sbjct: 208 SD----PEFQQKARAKVVALQQGEEQSRRAWQLLCEQ-----SRREFQK-----IYDLLD 253 Query: 279 -NLARQGYVYEGILPPPKSKTTQKC-----DMDRKQLLFRSTMVGDDVDRPLL--KSDGS 330 L +G + P + C D K + + +PL+ KSDG Sbjct: 254 IQLTERGESFYNPFLPAVIEDLAACGLLVEDQGAKVVFLEGFTNKEGQPQPLIIQKSDGG 313 Query: 331 YTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL- 388 Y Y DLA + + ++ D +IYV S + ++ VA + + Sbjct: 314 YNYATTDLAALRYRIDKDQADWIIYVTDVGQSTHFAQVFQVAQRAGWVPPHVTLTHVPFG 373 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS-----VRFMMLWRKNS-ELLD------ 436 + L DG ++ R+G+ I L ++ E + S R R S E +D Sbjct: 374 LVLGEDGK--RLKTRSGETIRLIDLLTEAIARSRADLEQRLATEGRTESPEFIDTVARAI 431 Query: 437 ----FDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDF- 477 + + + N VF Y+ YAY R + + R+ D+D+ Sbjct: 432 GIGAVKYADLSQNRNSNYVFSYDKMLSLQGNTAPYLLYAYVRVQGLTRRG-----DIDWC 486 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 L P + + E D +E L HL + ++ + P +L YL++L+ +F+ + Sbjct: 487 TLSPDSPLLLE---DETEQHLAKHLVQLEETLDLVSTELLPNRLCQYLFELSQLFNQFYD 543 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 P L Q + RL L + A + GL+++G+ Sbjct: 544 R---CPILSAPQPTKQS----RLTLAYLTAQTLKLGLSLLGI 578 >gi|170759904|ref|YP_001786465.1| arginyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree] gi|238688532|sp|B1KYT1|SYR_CLOBM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|169406893|gb|ACA55304.1| arginine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree] Length = 563 Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 136/576 (23%), Positives = 249/576 (43%), Gaps = 99/576 (17%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIE 111 L++ P IAE + +I + + V G ++N ++ + L K +L ++ + Sbjct: 44 LAKTFRKAPNLIAEELKEKINKEG-FEKVVTVGP-YLNFFVDKTVLIKDVLEKVLNEKEK 101 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG + +G+G V +E+ S N P H+GH +G+ L +++F GY ++ D G Sbjct: 102 YGSSKVGEGKNVVVEYSSPNIAKPFHIGHLFTTAIGNALYKILSFEGYNCIGINHLGDWG 161 Query: 172 AQINTLALSVF--WRYQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSEL-LNFPEE 227 Q L +S + W ++AL + G +Y+K H E + E LNF Sbjct: 162 TQFGKL-ISAYRRWVDEEALEKD----AIGELLRIYVKFHEEAEKNPELEKEARLNF--- 213 Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287 K L + + + LK N +D+ + D G+ S D +D + ++ Sbjct: 214 KKLEDGSEEETELWNRFKDLSLKEFNKVYDMLGIKFDSLAGE-SFYSDKMDAVVQE---- 268 Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRP---LLKSDGSYTYFAADLA- 339 +D K LL S ++ DD + P + KSDG+ Y DLA Sbjct: 269 ----------------IDDKGLLVDSNGAKVVMLDDYNMPPCMIKKSDGATIYATRDLAA 312 Query: 340 --YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGM 396 Y K Y+ F IYV+G+ + + K++ + A + LV+L Sbjct: 313 AMYRKKTYD--FHKCIYVVGTPQALHFKQVFTTLKLMGHDWADDCKHVGFGLVKLANK-- 368 Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD------------FCKVKE 444 K+S R GD + L ++++ ++++ ++ KN L D + F +K Sbjct: 369 --KLSTRNGDVVFLEDLLNQSVEETLK--IINEKNPNLKDKEGTAKKLGIGAVVFTYLKN 424 Query: 445 QSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490 + + VF YV+Y+YAR +SI R+A ++ + D+ + + + E Sbjct: 425 NRERDIVFDWKEILSFDGETGPYVEYSYARGKSILRKAGELTGEADY-----SKLSSKEE 479 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-SHGRENPRLRFVQ 549 F+ ++L L + I NA EP + Y+ ++A F+ + +HG + Sbjct: 480 FELAKL-----LGGFNDAIMNAIDKLEPAMVTRYVIEVAKAFNKFYNAHG-------ILN 527 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A + + + R++LV A +I + LN++G++ EM Sbjct: 528 AEDNDVKLARVKLVEATCQVIKNALNLLGIDVVEEM 563 >gi|218903314|ref|YP_002451148.1| arginyl-tRNA synthetase [Bacillus cereus AH820] gi|218537001|gb|ACK89399.1| arginyl-tRNA synthetase [Bacillus cereus AH820] Length = 562 Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 139/621 (22%), Positives = 252/621 (40%), Gaps = 101/621 (16%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ ++ L I + +ILD +IE P+ G + L++ P IA Sbjct: 2 DYKTQFAESLSNIFTNELTQNQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V G ++N+Y + + +L +I+ EYG+N G V Sbjct: 59 KEVAEKLS-DPFFTKVEAVGP-YVNVYFNRDTVSDAVLKTILAEKEEYGQNYFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS---- 180 I++ S N P +GH R ++G++L + GYEV YI D G Q L + Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKW 176 Query: 181 ----------------VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN- 223 ++ ++ + + +++ EG + K + E D+ + EL N Sbjct: 177 GNEAVVKEDPIRELFKLYVQFHEEVKDDEELEEEGR---AWFKKL--EEGDEEAVELWNW 231 Query: 224 FPEEKWLPIVKDYSV----------QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273 F E + Y + +A + +D + +HD+ + Sbjct: 232 FRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEESEG--------- 282 Query: 274 RDIIDNLARQGYVYEGILPP----PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 ++ NL +G +PP T D L+R G D ++ + Sbjct: 283 -ALVVNLEEEG------MPPCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQ 335 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHS--GYVKRLEAVAAAVSEKKAQINVLLCE 387 S + +F + G+ +V G +H G++ + +S +K ++ +LL E Sbjct: 336 SLHFN----QFFTVLKKLGY---TWVDGMEHVPFGFILK---DGKKMSTRKGRV-ILLEE 384 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKE 444 ++ D + ++ + V +VG +V F L KN + + +F +K Sbjct: 385 VLEEAIDLAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKF 442 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 + + P YVQY +AR SI R+ F F L D ++ L + Sbjct: 443 EGETGP--YVQYTHARACSILRKESVEFETCTFTL-----------KDDHSWNVLKLLNK 489 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 +P VIE A EP ++ Y+ D+A F+ ++ + +R + N K + RL LV+ Sbjct: 490 FPEVIEAACNKNEPSVISKYVLDVAQSFNKYYGN------VRILDENAEKDS--RLALVY 541 Query: 565 AVASIINSGLNIIGVESPNEM 585 AV ++ GL ++GVE+P EM Sbjct: 542 AVTVVLKEGLRLLGVEAPEEM 562 >gi|309810103|ref|ZP_07703949.1| arginine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D] gi|308169602|gb|EFO71649.1| arginine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D] Length = 558 Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 141/599 (23%), Positives = 249/599 (41%), Gaps = 111/599 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IERP++ G + L++ +P IA + A++ D + V + +IN Sbjct: 25 LIERPKNVKLGDYAF-PTFALAKIEHKNPAVIASELAAKLVNDNFAEIVAVGP--YINFA 81 Query: 93 LSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + L + L ++ +YG +G V I+ S N PM +GH R V+G+++A Sbjct: 82 IDHAKLVSVTLKKVLADQDKYGDQDNNQGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVY----- 205 ++ G+ + Y+ D G Q L + W ++A+ + YY + Sbjct: 141 KILQKIGFTPIKINYLGDYGTQFGKLITAYKLWGNEEAVKKDPITNLFHYYVKFHEEAEK 200 Query: 206 ---LKHVGK------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 L+ G+ E D + EL +W ++ S+Q +I ++ L + Sbjct: 201 DPKLEDEGRAWFKKLEEGDAEAVELW-----QWF---REVSLQEFNRIYKE----LGVTF 248 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D + E F+ ++ ++D L + ++E S+ Q D+D Sbjct: 249 DSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQVVDLD----------- 286 Query: 317 GDDVDRPL-LKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374 DD + L LKSDG+ Y DL A K E F +YV G++ SG+ K+L+ V + Sbjct: 287 -DDENPALILKSDGTSLYITRDLAAALYRKKEYAFAMSLYVAGNEQSGHFKQLKQVLGKM 345 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL------------------------ 410 Q ++ + ++G K+S R G+ + L Sbjct: 346 G-YDWQKDIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVKLALEQIEAKNPNLAN 402 Query: 411 -RHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFR 466 V +VG +V F L KN L +FDF V+ + P YVQY AR +SI R Sbjct: 403 KEQVAHQVGVGAVIFHDL--KNERLDNFDFNLNEVVRFEGDTGP--YVQYTNARAQSILR 458 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 +A D L D + +A++P +I+ A EP +A Y Sbjct: 459 KANVAIDDTKLAL-----------SDDWAFAVAKDIADFPAIIQKAFEKFEPSVIAKYSL 507 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +L+ F+ ++++ +R + ++ RL LV A + ++ L ++GV++P EM Sbjct: 508 NLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESLRLLGVDAPKEM 558 >gi|50284829|ref|XP_444842.1| hypothetical protein [Candida glabrata CBS 138] gi|49524144|emb|CAG57735.1| unnamed protein product [Candida glabrata] Length = 605 Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 135/555 (24%), Positives = 229/555 (41%), Gaps = 105/555 (18%) Query: 83 IAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 +A F+ ++ P YL K+L I+ YG+ + K KV IEF S N P H GH Sbjct: 104 VANGPFLQFFIEPHYLTGKLLPKILEERERYGQIPLVKDKKVLIEFSSPNIAKPFHAGHL 163 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY-QQALYNNDSDLPEGY 200 R ++G L++L G+ VT+ Y+ D G Q LA+ F RY + + D+ + Sbjct: 164 RSTIIGGFLSNLFQNFGWNVTKMNYLGDWGKQFGVLAVG-FERYGDEKMLETDAI---NH 219 Query: 201 YPGVYLKHVGKELADKYSS---ELLNFPEEKWLPIVKDYSVQAM----------MKIIRD 247 VY+K + K++ ++ SS L++ +++ +++ A+ ++ ++ Sbjct: 220 LFEVYVK-INKDIENEKSSNGKSLIDEQAKEYFCKLENNDTDAIKLWKKFRNLSIRKYKE 278 Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307 LNI +D++ E + I + + L G + E S + D+ + Sbjct: 279 TYSKLNIDYDVYSGESQVSK---ETILLVNNMLQASGLLKE-------SNGAKVVDLSKA 328 Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY-FKCKYERGFDNMIYVMGSDHSGYVKR 366 Q + +V KSDG+ Y D+A + K E FD MIYV+ S ++K+ Sbjct: 329 QKSLGAVVVQ--------KSDGASLYITRDIAAAIERKREYNFDKMIYVVASQQDLHMKQ 380 Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 L + + E K + L + GM MS R G I L ++++E + M Sbjct: 381 LYQI---LKELKFEWATSLEHI----NFGMVQGMSTRKGTVIFLDNILEEAQQQMLSVM- 432 Query: 427 LWRKNSELLDFDFCKVKEQS--------------------KENPVF-------------- 452 KN D F +VK S K N F Sbjct: 433 --SKN----DVKFTQVKNPSEIAYLIGTSAVMIQDMQSKRKNNYKFKWERMLTFEGDTGP 486 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRN--VIPQESEFDTSELQLIVHLAEYPRVIE 510 Y++YA++R +SI + K + L P N +I ++ D L+ ++ Y V++ Sbjct: 487 YLEYAHSRLKSIELKNKHLHESLT----PVNYELIGEQDALD-----LVRVMSRYHEVLK 537 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A +EP L YL+ +A + R +V + RL L A I+ Sbjct: 538 KALETREPSTLVTYLFKIAHQVSKCY-------RTVWVSGQPDDVAKARLHLFMASRQIL 590 Query: 571 NSGLNIIGVESPNEM 585 +GL ++GV + M Sbjct: 591 YNGLKLLGVTPVDRM 605 >gi|170584080|ref|XP_001896849.1| arginyl aa-tRNA synthetase protein 1, isoform b [Brugia malayi] gi|158595812|gb|EDP34311.1| arginyl aa-tRNA synthetase protein 1, isoform b, putative [Brugia malayi] Length = 732 Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 140/615 (22%), Positives = 262/615 (42%), Gaps = 106/615 (17%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID--PDVDSVF------- 82 I+I + G N++M +++ L + I+ VAR +D P+ D + Sbjct: 163 ILITETQQIKFGDYQFNSSMSIAQKLLRNGQKISPQEVARKILDNLPECDRIEKAIKLIM 222 Query: 83 -IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 ++G G+IN++L+ S++ +++I + GIE + + +V ++F S N MHVGH Sbjct: 223 EVSGPGYINIFLNRSWIATSITNIALKGIEVP---VIEKRRVLVDFSSPNIAKQMHVGHL 279 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYY 201 R ++GD+++ L+ + G++V R +I D G Q L + Q N +++P Sbjct: 280 RSTIIGDSISRLLTYVGFDVLRLNHIGDWGTQFGMLIAHL----QDCFPNFINEVP---- 331 Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 P L+ KE + F E++ V + D LKA + D+ Sbjct: 332 PISDLQAFYKESKKR-------FDEDEAFKARAYQCVTKLQSFDPDFLKAWQMICDV--- 381 Query: 262 EDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQKCD------MDRKQLLFRST 314 R D S I D +D N+ +G E + ++ D +D + + + Sbjct: 382 ----SRKDFSQIYDRLDINIVERG---ESFYQKHMVELVEELDKLGVLELDEGRKILK-- 432 Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAA 373 + + V ++KSDG +TY +DLA K + + D +IYV+ + S + + L A Sbjct: 433 -LSEGVPLTVVKSDGGFTYDTSDLAALKYRLFVDKADWIIYVVDAGQSLHFELLYAAGQK 491 Query: 374 V-----SEKKAQI---NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------- 416 + SEK+ ++ ++L E + K R+GD + L ++DE Sbjct: 492 LGWYSPSEKRVELVSFGLVLGEDKK--------KFKTRSGDSVRLTDLLDEGVKRAEAKL 543 Query: 417 --------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456 V V++ L + ++ F F ++ + + N Y+ Y Sbjct: 544 QEKERDKVMIPEELALARDAVAYGCVKYADLSQTRTQDYVFSFDRMLD-DRGNTAVYLLY 602 Query: 457 AYARCRSIFRQAKDIFPDLD--FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514 A+AR +SI R + D+ P ++P E + SE +L + ++ I N Sbjct: 603 AFARIQSICRNSGVSEEDIHNYLQSLPNGLLPLEHK---SEFRLAKTILKFTDCILNTLD 659 Query: 515 AQEPYKLAFYLYDLASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 ++L Y+Y LA+ FH ++ ++ + F + T RL L A+I+ Sbjct: 660 NFLLHQLCDYVYSLATTFHDFYNECYVIQKDTDGMYFALISLAINT--RLVLCKVTAAIM 717 Query: 571 NSGLNIIGVESPNEM 585 I+G+++ +M Sbjct: 718 ADCFKILGLKTVEKM 732 >gi|254171817|ref|ZP_04878493.1| arginyl-tRNA synthetase [Thermococcus sp. AM4] gi|214033713|gb|EEB74539.1| arginyl-tRNA synthetase [Thermococcus sp. AM4] Length = 640 Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 102/381 (26%), Positives = 162/381 (42%), Gaps = 67/381 (17%) Query: 16 KEIDCKIKVE-KKILDRIVIERPRD------------CAHGHLSTNAAMILSRPLGLDPL 62 KEI + ++ KK LD ++ E ++ G T A L+R P Sbjct: 4 KEIQERARLSLKKALDEMLTEAGKEWDGEITFDDTPSLELGDFGTAIAFQLARVFRKAPK 63 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGT 121 IAE +V RI+ P+ A G+IN Y+ SY R+++ I+ G YG + IG+ Sbjct: 64 LIAEELVERIE-KPEGIVEVKAVNGYINFYVDYSYFGRELVGEILGKGEAYGESEIGRDK 122 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 KV +E S NPT P+H+GH R AV+GDT+A +M GY+V + YI+D G Q V Sbjct: 123 KVIVEHTSVNPTKPLHMGHARNAVLGDTMARIMRRLGYKVEVQNYIDDLGVQF----AQV 178 Query: 182 FWRY---QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 W Y ++ +++L E ++ HV L + + + PE D V Sbjct: 179 LWGYLNMKEEFERIEAELREKGLKEDFIDHVMGLLYVEVNKRIEENPE-------VDKEV 231 Query: 239 QAMMKIIRDD---------------LKA-------LNIQHDIFISEDDFHRGDPSPIRDI 276 + +MK + + +KA + I +D+ E D R I Sbjct: 232 RELMKKLEEGNNEIAEIGRKLAERVVKAQMLTTYRMGIAYDLLSWESDIMRS------GI 285 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL---KSDGSYTY 333 + + E + K MD ++L ++ P L +SDG+ TY Sbjct: 286 FEEAYQLIESNENFFWGKEGKYKGAFVMDLRKLF-------PEMKNPFLVLKRSDGTATY 338 Query: 334 FAADLAYFKCKYERGFDNMIY 354 D+AY K+ + +M+Y Sbjct: 339 TGKDIAYHLWKFGKVKADMLY 359 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 52/173 (30%), Positives = 93/173 (53%), Gaps = 10/173 (5%) Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 + + VG +VRF ++ +++ F + V E+ Y+QYA+ARC SI R+A + Sbjct: 478 IAEAVGVGAVRFNLVKYSPDKVITFRWEDVLNFEGESAP-YIQYAHARCASILRKAGESG 536 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 + D+ S+ E +LI LA++P VIE+A +P+ + YL +LAS+F Sbjct: 537 VETDWKALLEKA--DFSKLTLREKELIKLLAKFPEVIESAGRDIKPHLVPAYLNELASLF 594 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + ++P L+ + + RL LV AV ++ +GL ++G+E+P +M Sbjct: 595 NKFYM---DHPVLKAEEGVKEE----RLLLVLAVKQVLRNGLELLGIEAPEKM 640 >gi|52143263|ref|YP_083566.1| arginyl-tRNA synthetase [Bacillus cereus E33L] gi|81688178|sp|Q63C01|SYR1_BACCZ RecName: Full=Arginyl-tRNA synthetase 1; AltName: Full=Arginine--tRNA ligase 1; Short=ArgRS 1 gi|51976732|gb|AAU18282.1| arginine--tRNA ligase (arginyl-tRNA synthetase) [Bacillus cereus E33L] Length = 562 Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 138/621 (22%), Positives = 254/621 (40%), Gaps = 101/621 (16%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ ++ L I +K+ILD +IE P+ G + L++ P IA Sbjct: 2 DYKTQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V G ++N++ + + +L +I+ EYG+N G V Sbjct: 59 KEVAEKLS-DPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGQNHFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS---- 180 I++ S N P +GH R ++G++L + GYEV YI D G Q L + Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKW 176 Query: 181 ----------------VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN- 223 ++ ++ + + +++ EG + K + E D+ + EL N Sbjct: 177 GNEAVVKEDPIRELFKLYVQFHEEIKDDEELEEEGR---AWFKKL--EEGDEEAVELWNW 231 Query: 224 FPEEKWLPIVKDYSV----------QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273 F E + Y + +A + +D + +HD+ + Sbjct: 232 FRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEESEG--------- 282 Query: 274 RDIIDNLARQGYVYEGILPP----PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 ++ NL +G +PP T D L+R G D ++ + Sbjct: 283 -ALVVNLEEEG------MPPCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQ 335 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHS--GYVKRLEAVAAAVSEKKAQINVLLCE 387 S + +F + G+ +V G +H G++ + +S +K ++ +LL E Sbjct: 336 SLHF----NQFFTVLKKLGY---TWVDGMEHVPFGFILK---DGKKMSTRKGRV-ILLEE 384 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKE 444 ++ + + ++ + V +VG+ +V F L KN + + +F +K Sbjct: 385 VLEEAIELAKQNIEEKNPNLKQKEEVAKQVGAGAVIFHDL--KNERMHNIEFSLENMLKF 442 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 + + P YVQY +AR SI R+ F F L D ++ L + Sbjct: 443 EGETGP--YVQYTHARACSILRKESVEFETCTFTL-----------KDDYSWNIVKLLNK 489 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 +P VIE A EP ++ Y+ D+A F+ ++ + +R + N K + RL LV+ Sbjct: 490 FPEVIEAACNKNEPSVISKYVLDVAQSFNKYYGN------VRILDENAEKDS--RLALVY 541 Query: 565 AVASIINSGLNIIGVESPNEM 585 AV ++ GL ++GVE+P EM Sbjct: 542 AVTVVLKEGLRLLGVEAPEEM 562 >gi|328851981|gb|EGG01130.1| hypothetical protein MELLADRAFT_45216 [Melampsora larici-populina 98AG31] Length = 623 Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 129/554 (23%), Positives = 220/554 (39%), Gaps = 110/554 (19%) Query: 84 AGKGFINLYLSPSYLRKILSSIV-----VSGIEYGRNL------IGKGTKVNIEFVSANP 132 A FIN + L K++ S + +S YG N +G+ K+ +EF S N Sbjct: 112 ANGSFINFQIRSKTLAKVVLSQINDLTHISKSSYGSNTSGYDSTLGRKKKLILEFSSPNI 171 Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192 H GH R ++G L +L +G++VTR Y+ D G Q LA+ F RY N Sbjct: 172 AKKFHAGHLRSTIIGAFLGNLHEANGWDVTRINYLGDWGRQFGVLAVG-FERYGSE--NE 228 Query: 193 DSDLPEGYYPGVY------LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 ++ P + VY ++ KE ++ + + E+ D + A+ K R Sbjct: 229 LTEQPIQHLLDVYTRINRDMEGGEKEALEQKARDFFKLMED------GDSTAVALWKRFR 282 Query: 247 D--------DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 D D LNI+ D++ E + ++ L ++G E Sbjct: 283 DYSIKQYEADYARLNIKFDVYSGESQV---SIESMDSALEILKQKGIAIE-------DNG 332 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357 T CD+D+ +L G V R K+DG+ Y D+ +YE+ FD MIYV+ Sbjct: 333 TLICDLDKYKL-------GRTVIR---KNDGTNLYITRDIGAAIQRYEQYKFDKMIYVVA 382 Query: 358 SDH----SGYVKRLE---------------AVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 S + + K LE + A +S +K +V L +++ R+ M Sbjct: 383 SQQDLHLAQFFKVLELMEFEWAKRLVHINFGMVAGMSTRKG-TSVHLEDMMNEARNTMHE 441 Query: 399 KMSKRAGDFITL---RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYV 454 +M K + + DEVG ++ + K +F + +V + P Y+ Sbjct: 442 QMLKNEDKYKEIPDPMGTADEVGLSGIKIQDMAGKRINGYEFKWDRVLSFEGDTGP--YL 499 Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS-----------ELQLIVHLA 503 QYA+ R S+ R+A P +V+PQ + T+ L++ LA Sbjct: 500 QYAHVRLCSVERKAG-----------PAHVLPQPDQLATTINTDLICEDPKARDLLMLLA 548 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 YP ++ A + EP + Y + L W V+ ++ + RL + Sbjct: 549 CYPDAVKLAFLKLEPSSIVTYCWKLTHAVSSAW-------ETLIVRGQTPEMALARLWVF 601 Query: 564 HAVASIINSGLNII 577 A ++ S + ++ Sbjct: 602 RACKDVLASAMKLL 615 >gi|309808155|ref|ZP_07702067.1| arginine--tRNA ligase [Lactobacillus iners LactinV 01V1-a] gi|312875062|ref|ZP_07735080.1| arginine--tRNA ligase [Lactobacillus iners LEAF 2053A-b] gi|308168624|gb|EFO70730.1| arginine--tRNA ligase [Lactobacillus iners LactinV 01V1-a] gi|311089457|gb|EFQ47883.1| arginine--tRNA ligase [Lactobacillus iners LEAF 2053A-b] Length = 558 Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 141/599 (23%), Positives = 249/599 (41%), Gaps = 111/599 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IERP++ G + L++ +P IA + A++ D + V + +IN Sbjct: 25 LIERPKNVKLGDYAF-PTFALAKIEHKNPAVIASELAAKLVNDNFAEIVAVGP--YINFA 81 Query: 93 LSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + L + L ++ +YG +G V I+ S N PM +GH R V+G+++A Sbjct: 82 IDHAKLVSVTLKKVLADQDKYGDQDNNQGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVY----- 205 ++ G+ + Y+ D G Q L + W ++A+ + YY + Sbjct: 141 KILQKIGFTPIKINYLGDYGTQFGKLITAYKLWGNEEAVKKDPITNLFHYYVKFHEEAEK 200 Query: 206 ---LKHVGK------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 L+ G+ E D + EL +W ++ S+Q +I ++ L + Sbjct: 201 DPKLEDEGRAWFKKLEEGDAEAVELW-----QWF---REVSLQEFNRIYKE----LGVTF 248 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D + E F+ ++ ++D L + ++E S+ Q D+D Sbjct: 249 DSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQVVDLD----------- 286 Query: 317 GDDVDRPL-LKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374 DD + L LKSDG+ Y DL A K E F +YV G++ SG+ K+L+ V + Sbjct: 287 -DDENPALILKSDGTSLYITRDLAAALYRKKEYNFAMSLYVAGNEQSGHFKQLKQVLGKM 345 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL------------------------ 410 Q ++ + ++G K+S R G+ + L Sbjct: 346 G-YDWQKDIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVKLALEQIEAKNPNLAN 402 Query: 411 -RHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFR 466 V +VG +V F L KN L +FDF V+ + P YVQY AR +SI R Sbjct: 403 KEQVAHQVGVGAVIFHDL--KNERLDNFDFNLNEVVRFEGDTGP--YVQYTNARAQSILR 458 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 +A D L D + +A++P +I+ A EP +A Y Sbjct: 459 KANVAIDDTKLAL-----------SDDWAFAVAKDIADFPAIIQKAFEKFEPSVIAKYSL 507 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +L+ F+ ++++ +R + ++ RL LV A + ++ L ++GV++P EM Sbjct: 508 NLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESLRLLGVDAPKEM 558 >gi|257876610|ref|ZP_05656263.1| arginyl-tRNA synthetase [Enterococcus casseliflavus EC20] gi|257810776|gb|EEV39596.1| arginyl-tRNA synthetase [Enterococcus casseliflavus EC20] Length = 563 Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 138/596 (23%), Positives = 251/596 (42%), Gaps = 102/596 (17%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P+ HG ++ A L++ P IA + +I + + + G ++N + Sbjct: 27 LLENPKSADHGDVAF-PAFSLAKVYRKAPQQIAADLAEKID-QASFEKIEVVGP-YLNFF 83 Query: 93 LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + +L ++ +G IG V I+ S N P+ +GH R V+G+++ Sbjct: 84 MDKKAISAHVLEMVLKEKNHFGDQTIGNQQAVPIDMSSPNIAKPISMGHLRSTVIGNSIG 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNND-SDLPEGYYPGVYLKHV 209 ++ GY+ R ++ D G Q L ++ W ++A+ ++L Y Sbjct: 144 FILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEEAVKAEPINELLRLYVDFHEAAET 203 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAM--MKIIRDD-LKALNIQHDIFISEDDFH 266 K+L D + W ++D +AM + RD+ LK N +D+ E F Sbjct: 204 DKQLEDDARA---------WFKKLEDGDQEAMDLWQWFRDESLKEFNKIYDML--EVSF- 251 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD----- 321 D+L + + K T+ ++ ++ L + + VD Sbjct: 252 -----------DSLNGEAFY--------NDKMTEVVELLEEKHLLKEDQGAEIVDLAAYD 292 Query: 322 -RPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV----- 370 P L KSDG+ Y D+A Y K Y F +YV+G++ S + K+L+AV Sbjct: 293 LNPALIRKSDGATLYITRDMAAALYRKRTY--NFAKSLYVVGNEQSYHFKQLKAVLKEMG 350 Query: 371 ------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412 +S +K +I VLL E++ D +++++ Sbjct: 351 FEWADDMTHVPFGLITKDGKKLSTRKGKI-VLLEEVLNEAIDSAKEQITEKNPTLENKEA 409 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAK 469 V +VG +V F L KN L +FDF V+ + + P YVQY++AR SI +A Sbjct: 410 VAKQVGVGAVVFHDL--KNDRLNNFDFTLEEVVRFEGETGP--YVQYSHARAMSILEKA- 464 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 DFD + S DT ++I + YP + A EP +A + LA Sbjct: 465 ------DFD---PAAVSSLSLADTESWEVIKLIQRYPETVLQAAEKYEPSVIAKHAIKLA 515 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ ++++ ++ + + K RL LV+AV +++ L ++G+ +P++M Sbjct: 516 QAFNKYYAN------VKILAEDAEKDA--RLALVYAVTTLLKEDLRLLGLHAPDKM 563 >gi|86741395|ref|YP_481795.1| arginyl-tRNA synthetase [Frankia sp. CcI3] gi|86568257|gb|ABD12066.1| arginyl-tRNA synthetase [Frankia sp. CcI3] Length = 598 Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 151/639 (23%), Positives = 253/639 (39%), Gaps = 107/639 (16%) Query: 6 DFSSRLKNYLKEID-CKIKVEKKILDRIVIERP------RDCAHGHLSTNAAMILSRPLG 58 DFS + I+ +I V I DR++ E R H +NAA+ L++ Sbjct: 8 DFSVTAQTVRSLINQVEIAVSAAI-DRVLPEAAGADPVVRPSEHADFQSNAALALAKRAR 66 Query: 59 LDPLTIAELIVARIKIDPD--VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116 P +A + ++ D V V ++G GF+NL L+ + + +++ ++ G +L Sbjct: 67 TKPADLATAVADALRADGSTAVADVTVSGPGFLNLALADATVWTQVAA-RLADPRLGIDL 125 Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176 + + I++ N MHVGH R ++GD LA ++ F G EV R+ ++ D G Q Sbjct: 126 PEQSRRTVIDYSGPNIAKEMHVGHLRTTIIGDALARVLGFLGAEVIRQNHLGDWGTQFGM 185 Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYL----KHVGKE------LADKYSSELLNFPE 226 L + + A +++D DL G L + KE AD+ + ++ Sbjct: 186 L-IQYLDEHPDATWHSD-DLAPGTSTVSALDSLYRAARKEFDADPGFADRARARVVALQA 243 Query: 227 ------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280 +W IV + V + I D L L D + + F+ + DI+D L Sbjct: 244 GDEDTVARWREIVAESEV--AFRQIYDRLGVLLEPSD--SAGESFYN---DRLLDIVDEL 296 Query: 281 ARQGYVY--EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 G EG L + T D D L+ R K+DG Y Y DL Sbjct: 297 TAAGIAQDSEGALVVLSQEVTGP-DGDPATLMVR-------------KTDGGYGYDTTDL 342 Query: 339 AYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGM 396 A + + + D ++YV+ + + + + + A ++V L DG Sbjct: 343 ATIRYRIRDLHADRLLYVVDARQALHFRLVFETARRAGWLTDAVDVAHVAFGTVLGPDGR 402 Query: 397 PIKMSKRAGDFITLR---------------------------HVVDEVGSDSVRFMMLWR 429 P K RAGD + L H+ + G +V++ L Sbjct: 403 PFK--TRAGDTVKLMDLLDAATGKARATVAEKDHALTDDDLDHIAEAAGIGAVKYADLST 460 Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489 ++ FD ++ V Y+QYA+ R +SI R+A D+ +D L Sbjct: 461 SRTKDYVFDVDRMVSFDGNTGV-YLQYAHTRIQSILRKAGDMTATVDVAL---------- 509 Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG---RENPRLR 546 +E L + L + + EP++L YLY+LA F + + +P R Sbjct: 510 ALHPAERALALQLDAFGGALTEVARLLEPHRLCNYLYELARAFTDFYEACPVLQADPSTR 569 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 AN RL L H A + GL+++G+ +P M Sbjct: 570 ---AN-------RLALCHLTARTLRQGLDLLGIAAPERM 598 >gi|152978766|ref|YP_001344395.1| arginyl-tRNA synthetase [Actinobacillus succinogenes 130Z] gi|171704277|sp|A6VNB3|SYR_ACTSZ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|150840489|gb|ABR74460.1| arginyl-tRNA synthetase [Actinobacillus succinogenes 130Z] Length = 575 Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 134/595 (22%), Positives = 230/595 (38%), Gaps = 108/595 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LGL+P A+ ++ + +D + + IAG GFIN++LS ++L Sbjct: 37 GDYQANGIMGAAKKLGLNPREFAQKVLDNLNLDGIAEKLEIAGPGFINIFLSKNWLV-CH 95 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + ++S + +G K + +++ S N MHVGH R ++GD + + F G V Sbjct: 96 ADEMLSAVNFGIK-TAKPQTIVVDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNHVI 154 Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204 R ++ D G Q L L F+R + Y+ND E Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENENASAMQLSDLEAFYRAAKEHYDNDEAFAEK----- 209 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 A Y +L + E + I+ V M+ +++ LN+ +D Sbjct: 210 ---------ARNYVVKLQSGDE--YCRIMWKKLVDITMRHNQENYDRLNV---TLTEKDV 255 Query: 265 FHRGDPSP-IRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 +P + +I+ +L +QG E G L + K GD + Sbjct: 256 MGESLYNPMLPEIVADLKKQGLAVEDDGALVVYLDEFKNKD--------------GDPMG 301 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG----SDHSGYVKRLEAVAAAVSEK 377 + K DG Y Y D+A K + + + + V S H + A V + Sbjct: 302 VIVQKKDGGYLYTTTDIAAAKYRCHKLHADRVLVFSDSRQSQHMQQAWLITRKAGYVPDS 361 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416 + + + L +DG P K R G + L+ ++DE Sbjct: 362 FSLEHPFFGMM--LGKDGKPFKT--RTGGTVKLKDLLDEAVERADKLIAERNPDLTAEEK 417 Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 V SV++ L + + FD+ + + N Y+QYAY R RSIF +A Sbjct: 418 AAVVEAVAIGSVKYSDLSKNRTTDYVFDWDNML-TFEGNTAPYMQYAYTRIRSIFARAGI 476 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 L+ D+ D E L++ L ++ + P+ L YLY+LA Sbjct: 477 EPNSLNDDIVLT---------DDKERVLVIKLLQFEEALNGVAKDGMPHILCQYLYELAG 527 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +F + P L R + RL+L A + GL+++G+++ +M Sbjct: 528 MFSAFY---EACPILN----AERPIKNSRLKLAALAAKTLKQGLDLLGIKTVEKM 575 >gi|39932107|sp|Q7VP38|SYR_HAEDU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|33147727|gb|AAP95249.1| arginyl-tRNA synthetase [Haemophilus ducreyi 35000HP] Length = 561 Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 130/561 (23%), Positives = 238/561 (42%), Gaps = 74/561 (13%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P A+ I+ + + VD + IAG GFIN++L PS+L K ++ + + +G Sbjct: 40 NPREFAQKILDNLDVSDMVDKLEIAGPGFINIFLKPSWLAK-QANFALQAVNFGIKTAQP 98 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-A 178 T + I++ S N MHVGH R ++GD + + F G V R ++ D G Q L A Sbjct: 99 QT-ILIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNNVIRANHVGDWGTQFGMLIA 157 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 +QA SDL E +Y + + Y S+ + F E+ +VK S Sbjct: 158 YLEKMENEQASEMQLSDL-EAFY---------RAAKESYDSDQI-FAEKARNYVVKLQSG 206 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI-RDIIDNLARQGYVYEGILPPPKSK 297 + + L + + H+ ++++ R + + +D++ +Y +LP + Sbjct: 207 DEYCRTMWKKLVDITMHHN----QENYDRLNVTLTEKDVMGE-----SLYNPMLPEIVAD 257 Query: 298 TTQK---CDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFD 350 K + + ++F GD + + KSDG + Y D+A K +YE D Sbjct: 258 LKAKGLAVEDNGAVVVFLDEFKNKDGDPMGVIIQKSDGGFLYTTTDIAAAKYRYETLKVD 317 Query: 351 NMIYVMGSDHSGYV-------KRLEAVAAAVSEKKAQINVLLCELVRLY--RDGMPIKMS 401 + S + ++ ++ V A+ S + ++L + + + R G +K+ Sbjct: 318 RALVFSDSRQAQHMQQAWLITRKAGYVPASFSLEHPFFGMMLGKDGKPFKTRSGGTVKLK 377 Query: 402 -------KRAGDFITLRH----------VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 +RA I+ R VV+ V SV++ L + + FD+ + Sbjct: 378 DLLDEAVERADKLISARSTNLTVAEKSAVVEAVAIGSVKYSDLSKNRTTDYVFDWDNML- 436 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 + N Y+QYAY R RSIF +A ++ P + + + E L + L + Sbjct: 437 TFEGNTAPYMQYAYTRIRSIFARA---------EIDPDTLTGEMQLTEEKERTLALKLLQ 487 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 + + P+ L YLY+LA +F + P L +A + RL+L Sbjct: 488 FEEALTAVAKEGMPHILCQYLYELAGIFSSFY---EACPMLNADEA----IKHSRLRLAS 540 Query: 565 AVASIINSGLNIIGVESPNEM 585 A + GL+++G+++ +M Sbjct: 541 LTAKTLKQGLDLLGIKTVEKM 561 >gi|109894992|sp|Q2J9H6|SYR_FRASC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS Length = 588 Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 141/600 (23%), Positives = 238/600 (39%), Gaps = 99/600 (16%) Query: 38 RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD--VDSVFIAGKGFINLYLSP 95 R H +NAA+ L++ P +A + ++ D V V ++G GF+NL L+ Sbjct: 36 RPSEHADFQSNAALALAKRARTKPADLATAVADALRADGSTAVADVTVSGPGFLNLALAD 95 Query: 96 SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155 + + +++ ++ G +L + + I++ N MHVGH R ++GD LA ++ Sbjct: 96 ATVWTQVAA-RLADPRLGIDLPEQSRRTVIDYSGPNIAKEMHVGHLRTTIIGDALARVLG 154 Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL----KHVGK 211 F G EV R+ ++ D G Q L + + A +++D DL G L + K Sbjct: 155 FLGAEVIRQNHLGDWGTQFGML-IQYLDEHPDATWHSD-DLAPGTSTVSALDSLYRAARK 212 Query: 212 E------LADKYSSELLNFPE------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259 E AD+ + ++ +W IV + V + I D L L D Sbjct: 213 EFDADPGFADRARARVVALQAGDEDTVARWREIVAESEV--AFRQIYDRLGVLLEPSD-- 268 Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVY--EGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 + + F+ + DI+D L G EG L + T D D L+ R Sbjct: 269 SAGESFYN---DRLLDIVDELTAAGIAQDSEGALVVLSQEVTGP-DGDPATLMVR----- 319 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 K+DG Y Y DLA + + + D ++YV+ + + + + + A Sbjct: 320 --------KTDGGYGYDTTDLATIRYRIRDLHADRLLYVVDARQALHFRLVFETARRAGW 371 Query: 377 KKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLR------------------------ 411 ++V L DG P K RAGD + L Sbjct: 372 LTDAVDVAHVAFGTVLGPDGRPFK--TRAGDTVKLMDLLDAATGKARATVAEKDHALTDD 429 Query: 412 ---HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 H+ + G +V++ L ++ FD ++ V Y+QYA+ R +SI R+A Sbjct: 430 DLDHIAEAAGIGAVKYADLSTSRTKDYVFDVDRMVSFDGNTGV-YLQYAHTRIQSILRKA 488 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 D+ +D L +E L + L + + EP++L YLY+L Sbjct: 489 GDMTATVDVAL----------ALHPAERALALQLDAFGGALTEVARLLEPHRLCNYLYEL 538 Query: 529 ASVFHGHWSHG---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A F + + +P R AN RL L H A + GL+++G+ +P M Sbjct: 539 ARAFTDFYEACPVLQADPSTR---AN-------RLALCHLTARTLRQGLDLLGIAAPERM 588 >gi|127511312|ref|YP_001092509.1| arginyl-tRNA synthetase [Shewanella loihica PV-4] gi|166232841|sp|A3Q9V2|SYR_SHELP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|126636607|gb|ABO22250.1| arginyl-tRNA synthetase [Shewanella loihica PV-4] Length = 581 Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 133/609 (21%), Positives = 243/609 (39%), Gaps = 110/609 (18%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 RI ++R +D HG +TN AM+L++ +P +A+LI+ + + V V IAG GFIN Sbjct: 29 RIQVDRTKDKTHGDFATNLAMMLTKVARKNPREVAQLIIDSLPQNSQVAKVEIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 ++ + L L + +S G L T V +++ S N MHVGH R ++GD + Sbjct: 89 FFIDENALTNQLMA-ALSDDHLGVTLPTPQTVV-VDYSSPNLAKEMHVGHLRSTIIGDAV 146 Query: 151 ASLMAFSGYEVTREYYINDAG--------------------AQINTLALSVFWRYQQALY 190 + F G++V R+ ++ D G AQ+ L F+R + + Sbjct: 147 VRALEFQGHKVIRQNHVGDWGTQFGMLLAYMEELRAQQGEQAQVELADLESFYRAAKVRF 206 Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250 + + V G E +K E + + + V + R D++ Sbjct: 207 DESEEFATRARQLVVELQSGDEYCNKLWREFNDISLSHCHEVYERLGV----SLTRADVR 262 Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310 + +D + ++ +L QG + E S + D Q Sbjct: 263 GESAYND--------------DLEQVVRDLDAQGLLSE-------SNGAKVVFQDEFQ-- 299 Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEA 369 T G+ + + K+DG + Y +DLA + + D +Y + + + +++ + Sbjct: 300 ---TKEGEPLPVIIQKADGGFLYATSDLAAMRYRSNVLKADRALYFVDLRQALHFQQVFS 356 Query: 370 VAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428 +A + + ++++ + DG P K R+G + L VD + R + L Sbjct: 357 LARTANFVRPELSLEHMGFGTMNGEDGRPFKT--RSGGVVKL---VDLLSEAETRALELV 411 Query: 429 R-KNSELLDFDFCKVKEQSKENPVFYVQYA------------------------------ 457 R KN ++ + + K+ +K + V+YA Sbjct: 412 RSKNPDMDEEELAKI---AKVVGIASVKYADLSKNRASDYIFSFEQMLSFEGNTAPYLLY 468 Query: 458 -YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 Y R IF++A +I DL ++ + E D E +L LA++ V+ Sbjct: 469 AYTRVAGIFKRAAEI------DLTGASI---KLEHD-KEKELGNKLAQFAEVLGRMVAKG 518 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 +P+ L YL++LA F + P L + +K RL L A + GL++ Sbjct: 519 QPHALCGYLFELAGAFSSFY---EACPVLAADSEDEKK---SRLLLAQLTAKTLKQGLDL 572 Query: 577 IGVESPNEM 585 +G+E+ M Sbjct: 573 LGIETLERM 581 >gi|326572757|gb|EGE22743.1| arginyl-tRNA synthetase [Moraxella catarrhalis BC7] Length = 575 Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 136/601 (22%), Positives = 240/601 (39%), Gaps = 100/601 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ LG++P A+ ++ + ID + + IAG GFIN++ Sbjct: 27 LVRQSNKIQFGDYQANGIMGAAKKLGMNPREFAQTVLDHLSIDDIAEKLEIAGPGFINIF 86 Query: 93 LSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 L ++ K + +S G+ +N V +++ S N MHVGH R ++GD+ Sbjct: 87 LKNEWISKHANQANISRTLGVNTAQN-----DTVVVDYSSPNVAKEMHVGHLRSTIIGDS 141 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND------SDLPEGYYPG 203 + + F G V R ++ D G Q L Y + + N+D SDL Y Sbjct: 142 VVRTLEFLGNTVIRANHVGDWGTQFGMLI-----AYLEKVQNDDVKDLDLSDLEAFYRAA 196 Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 + + A K + ++ L +Y + K++ D+ QH Sbjct: 197 KHAYDSDEAFAKKSRNYVVK------LQSGDEYCLTMWRKLV--DITMAQCQH------- 241 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFR---STMVG 317 + R + + RD D + +Y +LP K + D ++F + G Sbjct: 242 TYDRLNVTLTRD--DTMGES--LYNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAG 297 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 D + + K DG Y Y D+A +Y + + ++ +D + L A A + + Sbjct: 298 DPMGVIIQKKDGGYLYTTTDIAAAAYRYHTLHADRV-ILFTDAR---QTLHAQQAWLITR 353 Query: 378 KAQI--NVLLCEL----VRLYRDGMPIKMSKRAGDFITL--------------------- 410 KA + + E + L +DG P K R G + L Sbjct: 354 KAGFVPDEFVMEHFTFGMMLGKDGKPFKT--RTGGTVKLADLLDEAIERATTLIEQKNPD 411 Query: 411 ------RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 R VV+ V +V++ L + + FD+ + + N Y+QYAY R RSI Sbjct: 412 LSAEEKRAVVEAVAIGAVKYSDLSKNRNTDYAFDWDNML-SFEGNTAPYMQYAYTRIRSI 470 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 F +A LD ++ E + E L V L ++ V+ P+ L Y Sbjct: 471 FVRAG-----LDMADIGGEIVIHEDK----ERALAVKLLQFEEVLLLVAKDGMPHLLCQY 521 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 L++LA +F + P L +++ K RL+L A + GL ++G+++ + Sbjct: 522 LFELAGIFSSFY---EACPIL----SSDDKTKTSRLRLAALTAKTLKQGLQLLGIKTVEK 574 Query: 585 M 585 M Sbjct: 575 M 575 >gi|229085154|ref|ZP_04217401.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock3-44] gi|228698135|gb|EEL50873.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock3-44] Length = 562 Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 142/599 (23%), Positives = 241/599 (40%), Gaps = 109/599 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IE P+ G + M L++ P IA+ + + DS F + + Y Sbjct: 27 LIETPKQDEFGDAAFPCFM-LAKQYKKAPAIIAKEVAENLN-----DSFFTKVEA-VGPY 79 Query: 93 LSPSYLRKILSSIVVSGI-----EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 ++ + R I+S V+ I EYG+ G+ V I++ S N P +GH R ++G Sbjct: 80 VNVFFNRHIVSDDVLKMILAEKEEYGQGHFGQEKTVVIDYSSPNIAKPFSMGHLRSTMIG 139 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 ++L + GYEV YI D G Q L ++ + ++ + + E + V+ Sbjct: 140 NSLKHIAEKCGYEVVGINYIGDWGTQFGKL-ITAYKKWGNEELVKEDPIRELFKLYVHFH 198 Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM---KIIRDDLKALNIQHDIFISEDD 264 KE + L W ++D +A+ + LK + +++ E Sbjct: 199 EEVKENPE------LEEEGRAWFKKLEDGDEEAVFLWNWFRHESLKEFSRIYELLGVEFT 252 Query: 265 FHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 +G+ + D ++ L +G + E S Q +++++ + Sbjct: 253 NFQGEAFYNDKMDDFVEILEEKGLLEE-------SDGAQVVNLEKEDM------------ 293 Query: 322 RPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS- 375 P L KSDG+ Y DL Y + YE FD +YV+G++ S + + V + Sbjct: 294 PPCLIKKSDGATLYATRDLTAALYRQNTYE--FDKALYVVGAEQSLHFTQFFTVLKKLGY 351 Query: 376 ---EKKAQINVLLCELVRLYRDGMPIKMSKRAG-------------------------DF 407 + A + L + +DG KMS R G D Sbjct: 352 NWVDGMAHVPFGL-----ILKDGK--KMSTRKGKVVLLEEVLEEAIMLAKQNIEEKNPDL 404 Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFR 466 V +VG +V F L + ++F K +K + + P YVQY +AR SI R Sbjct: 405 KQKEEVAKQVGVGAVIFHDLKNERMHNIEFSLEKMLKFEGETGP--YVQYTHARACSILR 462 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 + F F L D I L +P+VIE A EP +A YL Sbjct: 463 KENVEFETESFALN-----------DDHSWSTIKLLNRFPKVIETAFSKNEPSHIAKYLL 511 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 D+A F+ ++ + +R ++ N K + RL LV+AV ++ GL ++G+ +P EM Sbjct: 512 DVAQAFNKYYGN------VRILENNEEKES--RLALVYAVIVVLKEGLRLLGMGAPEEM 562 >gi|300118117|ref|ZP_07055865.1| arginyl-tRNA synthetase [Bacillus cereus SJ1] gi|298724428|gb|EFI65122.1| arginyl-tRNA synthetase [Bacillus cereus SJ1] Length = 562 Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 141/616 (22%), Positives = 250/616 (40%), Gaps = 91/616 (14%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ ++ L I +K+ILD +IE P+ G + L++ P IA Sbjct: 2 DYKTQFAESLYNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V G ++N++ + + +L +I+ EYG+N G V Sbjct: 59 KEVAEKLS-DPFFAKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNHFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 I++ S N P +GH R ++G++L + GYEV YI D G Q L + Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKW 176 Query: 185 YQQALYNNDS---------DLPEGYYPGVYLKHVGK------ELADKYSSELLN-FPEEK 228 +A+ D E L+ G+ E D+ + EL N F E Sbjct: 177 GNEAVVKEDPIRELFKLYVQFHEEVKDDGELEEDGRAWFKKLEEGDEEAVELWNWFRHES 236 Query: 229 WLPIVKDYSV----------QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 + Y + +A + +D + +HD+ + +I Sbjct: 237 LKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEESEG----------ALIV 286 Query: 279 NLARQGYVYEGILPP----PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334 NL +G +PP T D L+R G D ++ + S + Sbjct: 287 NLEEEG------MPPCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQSLHF- 339 Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHS--GYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 +F + G++ +V G +H G++ + +S +K ++ +LL E++ Sbjct: 340 ---NQFFTVLKKLGYN---WVDGMEHVPFGFILK---DGKKMSTRKGRV-ILLEEVLEEA 389 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKEN 449 + + ++ + V +VG +V F L KN + + +F +K + + Sbjct: 390 IELAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETG 447 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 P YVQY +AR SI R+ F F L D ++ L ++P VI Sbjct: 448 P--YVQYTHARACSILRKESVEFETCTFTL-----------KDDYSWNIVKLLNKFPEVI 494 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 E A EP ++ Y+ D+A +F+ ++ + +R + N K + RL LV+AV + Sbjct: 495 EAACNKNEPSVISKYVLDVAQLFNKYYGN------VRILDENAEKDS--RLALVYAVTVV 546 Query: 570 INSGLNIIGVESPNEM 585 + GL ++GVE+P EM Sbjct: 547 LKEGLRLLGVEAPEEM 562 >gi|221134747|ref|ZP_03561050.1| arginyl-tRNA synthetase [Glaciecola sp. HTCC2999] Length = 577 Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 132/588 (22%), Positives = 246/588 (41%), Gaps = 91/588 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AM L++ L P +A+ I+ + +D + IAG GFIN++LS +L + Sbjct: 36 GEYQFNGAMGLAKRLRCSPRDVAQQILDVVDLDGIAEQCEIAGPGFINIHLSSQWLAQQA 95 Query: 103 SSIVVS---GIEYG--RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 S ++ GIE +N++ +++ + N MHVGH R ++GD +A + F Sbjct: 96 SRVLADERLGIETQPQQNIV-------VDYSAPNLAKEMHVGHLRSTIIGDAVAKALEFM 148 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQ--QALYNNDSDLPEGYYPGVYLKHVGKE-LA 214 G+ V R+ ++ D G Q L + + Q + SDL E +Y ++ +E A Sbjct: 149 GHNVLRQNHMGDWGTQFGMLLAHLNDKLQANEVAETALSDL-EDFYRQAKVRFDAEEGFA 207 Query: 215 DKYSSELLNFP--EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 D+ ++ ++ L + +++ + + + + LN+ E +P Sbjct: 208 DRAREYVVKLQGGDDACLALWQNF-IDVSIAHSEEVYEKLNVS---LTREHVMGESAYNP 263 Query: 273 -IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL----KS 327 + ++I +L QG E Q++F + D +P + KS Sbjct: 264 DLANVISDLQAQGVAVEDA---------------GAQVVFLDEL-ADKNGKPAVYIVQKS 307 Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386 G Y Y DLA + + ++ + + + + K+ E VA A C Sbjct: 308 GGGYLYATTDLAAIRYRKQQLAAHRTLIFTDARQALHFKQTEIVARKAGFLAADEQYQHC 367 Query: 387 EL-VRLYRDGMPIK-----------------------MSKRAGDFI--TLRHVVDEVGSD 420 + L +DG P K ++ R DF TL + +++G Sbjct: 368 PFGMMLGKDGKPFKTRTGGTVKLIDLLDEAVERAQTLLATRDNDFSADTLADMANKIGIG 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +V++ L + + FD+ + N Y+QYA+ R +SIF +A ++ + Sbjct: 428 AVKYADLSKNRTTDYIFDW-DAMLSFEGNTAPYLQYAFTRIQSIFNKA-----NVTLENC 481 Query: 481 PRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 N++ PQE T LQ Y +E P+ L YLY+LAS++ + Sbjct: 482 RENIVINAPQEKALATKLLQ-------YQDTLEQMAHEATPHVLCTYLYELASLYMKFY- 533 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P L+ + + K + RL L ++ ++ GL+++G+ + ++M Sbjct: 534 --EACPILKDDVSESDKAS--RLALCALCSNTLSHGLDVLGIATLDKM 577 >gi|161511522|ref|NP_872860.2| arginyl-tRNA synthetase [Haemophilus ducreyi 35000HP] Length = 575 Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 130/561 (23%), Positives = 238/561 (42%), Gaps = 74/561 (13%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P A+ I+ + + VD + IAG GFIN++L PS+L K ++ + + +G Sbjct: 54 NPREFAQKILDNLDVSDMVDKLEIAGPGFINIFLKPSWLAK-QANFALQAVNFGIKTAQP 112 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-A 178 T + I++ S N MHVGH R ++GD + + F G V R ++ D G Q L A Sbjct: 113 QT-ILIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNNVIRANHVGDWGTQFGMLIA 171 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 +QA SDL E +Y + + Y S+ + F E+ +VK S Sbjct: 172 YLEKMENEQASEMQLSDL-EAFY---------RAAKESYDSDQI-FAEKARNYVVKLQSG 220 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI-RDIIDNLARQGYVYEGILPPPKSK 297 + + L + + H+ ++++ R + + +D++ +Y +LP + Sbjct: 221 DEYCRTMWKKLVDITMHHN----QENYDRLNVTLTEKDVMGE-----SLYNPMLPEIVAD 271 Query: 298 TTQK---CDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFD 350 K + + ++F GD + + KSDG + Y D+A K +YE D Sbjct: 272 LKAKGLAVEDNGAVVVFLDEFKNKDGDPMGVIIQKSDGGFLYTTTDIAAAKYRYETLKVD 331 Query: 351 NMIYVMGSDHSGYV-------KRLEAVAAAVSEKKAQINVLLCELVRLY--RDGMPIKMS 401 + S + ++ ++ V A+ S + ++L + + + R G +K+ Sbjct: 332 RALVFSDSRQAQHMQQAWLITRKAGYVPASFSLEHPFFGMMLGKDGKPFKTRSGGTVKLK 391 Query: 402 -------KRAGDFITLRH----------VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 +RA I+ R VV+ V SV++ L + + FD+ + Sbjct: 392 DLLDEAVERADKLISARSTNLTVAEKSAVVEAVAIGSVKYSDLSKNRTTDYVFDWDNML- 450 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 + N Y+QYAY R RSIF +A ++ P + + + E L + L + Sbjct: 451 TFEGNTAPYMQYAYTRIRSIFARA---------EIDPDTLTGEMQLTEEKERTLALKLLQ 501 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 + + P+ L YLY+LA +F + P L +A + RL+L Sbjct: 502 FEEALTAVAKEGMPHILCQYLYELAGIFSSFY---EACPMLNADEA----IKHSRLRLAS 554 Query: 565 AVASIINSGLNIIGVESPNEM 585 A + GL+++G+++ +M Sbjct: 555 LTAKTLKQGLDLLGIKTVEKM 575 >gi|31747865|gb|AAN10190.1| argynyl tRNA synthetase [Candidatus Fritschea bemisiae] Length = 578 Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 139/583 (23%), Positives = 245/583 (42%), Gaps = 82/583 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH N+AM L++ P IAE IV +D V+ + +AG GF+N+ L +L + L Sbjct: 38 GHYQCNSAMELAKKTSRHPREIAEQIVKNWGLDERVEKLEVAGPGFVNITLKKEFLDQEL 97 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + + G + + K K+ +EF S N +HVGH R ++G++LA L F G++V Sbjct: 98 NRLATDR-RLGASPLKKRKKIIVEFSSPNIAKELHVGHLRSTIIGESLARLFEFLGHQVL 156 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELADKYSSE 220 R +I D G Q L ++ +Q+ + + + +DLP L D Y Sbjct: 157 RLNHIGDWGTQFGML-IAYLKEFQKEVLSGEKKADLP--------------ALMDWYRES 201 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN- 279 F P K + ++ + + + +AL + I + R I D +D Sbjct: 202 KKLFDTN---PAFKKRAQIEVVNLQKKEKEALAVWETI----REISRKGFQEIYDWLDVS 254 Query: 280 -LARQGYVYEGILPPPKSKTTQKCDM---DRKQLLFRSTMVG-DDVDRPLL--KSDGSYT 332 + R Y LP + K + D + +F G D PL+ KSDG Y Sbjct: 255 LIERGESYYNETLPKVIEEYEAKGIIQISDGAKCVFLEGFKGKDQAPLPLILQKSDGGYN 314 Query: 333 YFAADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA--------AAVSEKKAQIN 382 Y D A + + E+G D ++YV+ + + + + A A A V + Sbjct: 315 YATTDTAALFQRIHIEKG-DRILYVVDAGQRLHFQMVFAAAFKAGYYDPARVEIEHVPFG 373 Query: 383 VL-----------------LCELVR--LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 V+ L +L++ +YR + +K + + L + +G +SV+ Sbjct: 374 VVLGADGKKFKTRSGQTEKLIDLLKEAVYRAKILLKNRLPSVEEKDLEKLAKILGINSVK 433 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 + L L D+ F + + E N Y+ Y+Y R + I + + + DL Sbjct: 434 YADL--SCHRLKDYIFNYDRMLNFEGNTAAYLLYSYVRIQGIKEKC-----NRNIDLLSH 486 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 + Q + +E+ L + L ++ + P +L+ YLY LA FH + R Sbjct: 487 SARIQLTH--PTEIALGLKLRQFGEALTLMDRDLLPNRLSDYLYHLAEKFHAFFRDCR-- 542 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V+ + ++ + RL L + I+ GL I+G+++ + M Sbjct: 543 -----VKGSPQEDS--RLLLCELTSQILQKGLYILGLKTMDRM 578 >gi|256822588|ref|YP_003146551.1| arginyl-tRNA synthetase [Kangiella koreensis DSM 16069] gi|256796127|gb|ACV26783.1| arginyl-tRNA synthetase [Kangiella koreensis DSM 16069] Length = 588 Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 149/627 (23%), Positives = 255/627 (40%), Gaps = 133/627 (21%) Query: 34 IERPRDCAH---------GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84 +E PR+ + GH N AM ++ +P AE +VA + + ++ + + Sbjct: 20 LELPRELGNVQRSNRPDLGHYQCNGAMAAAKLGAGNPFVTAEKVVAALSDNSLIEKLDVV 79 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 GFIN++++ L + L S S +G KV I+F N MHVGH R A Sbjct: 80 RPGFINVFVNAESLAQTLES-YGSDETFGSYEDKSDCKVMIDFGGPNVAKSMHVGHLRTA 138 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP-- 202 ++GD+L + F GY+V + ++ D G Q+ L + + Q L D+D G YP Sbjct: 139 IIGDSLQRIFRFKGYQVVSDAHLGDWGTQMGML-IEGLKKRQTDLVYFDADFS-GPYPEE 196 Query: 203 ---------GVYLKHVG--------KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245 +Y + G E A + + EL N + + K + V + + Sbjct: 197 SPVTIQDLEEIYPQESGLCKSDEAVAEKARQATLELQN-GRAGYRALWKHF-VDVSVATL 254 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY--EGILPPPKSKTTQKCD 303 + D L + D++ E D DP I +I L +G +G L P Sbjct: 255 KRDYGELGVSFDLWKGESD---ADPF-IAKVIQQLEDKGLAVRDQGALIVP--------- 301 Query: 304 MDRKQLLFRSTMVGDDVDRPLL------KSDGSYTYFAADLAYFKCKYERGFDN----MI 353 F+ DD D ++ KSDG+ Y DLA YER +++ ++ Sbjct: 302 -------FK-----DDQDEAIMPPLILRKSDGAVMYGTTDLATL---YERVYNDHANLVL 346 Query: 354 YVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRLYRDGMP-------------- 397 YV+ + K++ A A ++ A + + +DG P Sbjct: 347 YVVDGRQQQHFKQVFAAADLMGMNANTAYEHTYFGTVNG--KDGKPFKTRSGGVMKLHDL 404 Query: 398 IKMSKR-------AGDFIT------LRHVVDEVGSDSVRFMMLWRKNSELLD--FDFCKV 442 I+M+K A +F T + +V +++F L +N + D FD K Sbjct: 405 IQMAKEEARKKLAASNFGTEFDEDEKEEIAHKVAISTLKFADL--RNFRIKDYIFDLEKF 462 Query: 443 KE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP-QESEFDTSELQLIV 500 E + K P +Q AR +SI R+A++ P ++P E+E+D L Sbjct: 463 SEFEGKTGPYLLMQ--VARIKSILRKAEEAGAK------PGELMPTSENEYD-----LTF 509 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW--SHGRENPRLRFVQANNRKLTMM 558 L ++P ++ + P+ L +LY+LA F + H P R+ +++ Sbjct: 510 GLLDFPVALDKTVDKRAPHYLCEHLYNLAQQFSSFYQKQHIMNEPD------KARQASLL 563 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 RL + + + GLN++G+E+ M Sbjct: 564 RLSQI--CLAQLEMGLNLLGIETLERM 588 >gi|196039674|ref|ZP_03106978.1| arginine--tRNA ligase [Bacillus cereus NVH0597-99] gi|196029377|gb|EDX67980.1| arginine--tRNA ligase [Bacillus cereus NVH0597-99] Length = 562 Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 138/621 (22%), Positives = 252/621 (40%), Gaps = 101/621 (16%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ ++ L I +++ILD +IE P+ G + L++ P IA Sbjct: 2 DYKTQFAESLSNIFTNELTQQQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V G ++N++ + + +L +I+ EYG+N G V Sbjct: 59 KEVAEKLS-DPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNYFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA------ 178 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKW 176 Query: 179 --------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN- 223 ++ ++ + + +++ EG + K + E D+ + EL N Sbjct: 177 GNEAVVKEDPIRELFKLYVQFHEEVKDDEELEEEGR---AWFKKL--EEGDEEAVELWNW 231 Query: 224 FPEEKWLPIVKDYSV----------QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273 F E + Y + +A + +D + +HD+ + Sbjct: 232 FRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEESEG--------- 282 Query: 274 RDIIDNLARQGYVYEGILPP----PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 ++ NL +G +PP T D L+R G D ++ + Sbjct: 283 -ALVVNLEEEG------MPPCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQ 335 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHS--GYVKRLEAVAAAVSEKKAQINVLLCE 387 S + +F + G+ +V G +H G++ + +S +K ++ +LL E Sbjct: 336 SLHF----NQFFTVLKKLGY---TWVDGMEHVPFGFILK---DGKKMSTRKGRV-ILLEE 384 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKE 444 ++ D + ++ + V +VG +V F L KN + + +F +K Sbjct: 385 VLEEAIDLAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKF 442 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 + + P YVQY +AR SI R+ F F L D ++ L + Sbjct: 443 EGETGP--YVQYTHARACSILRKESVEFETCTFTL-----------KDDYSWNIVKLLNK 489 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 +P VIE A EP ++ Y+ D+A F+ ++ + +R + N K + RL LV+ Sbjct: 490 FPEVIEAACNKNEPSVISKYVLDVAQSFNKYYGN------VRILDENAEKDS--RLALVY 541 Query: 565 AVASIINSGLNIIGVESPNEM 585 AV ++ GL ++GVE+P EM Sbjct: 542 AVMVVLKEGLRLLGVEAPEEM 562 >gi|15605181|ref|NP_219967.1| arginyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX] gi|255311266|ref|ZP_05353836.1| arginyl-tRNA synthetase [Chlamydia trachomatis 6276] gi|255317568|ref|ZP_05358814.1| arginyl-tRNA synthetase [Chlamydia trachomatis 6276s] gi|7674345|sp|O84460|SYR_CHLTR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|3328887|gb|AAC68054.1| Arginyl tRNA Transferase [Chlamydia trachomatis D/UW-3/CX] gi|296436909|gb|ADH19079.1| arginyl-tRNA synthetase [Chlamydia trachomatis G/11222] gi|297748585|gb|ADI51131.1| Arginyl-tRNA synthetase [Chlamydia trachomatis D-EC] gi|297749465|gb|ADI52143.1| Arginyl-tRNA synthetase [Chlamydia trachomatis D-LC] Length = 563 Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 142/585 (24%), Positives = 225/585 (38%), Gaps = 102/585 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH N AM L+R L P IAE IVA I P S+ IAG GFIN S +L L Sbjct: 39 GHYQCNDAMKLARVLHKSPRAIAESIVAHIPPTP-FSSIEIAGAGFINFTFSKEFLASQL 97 Query: 103 SSI---VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 + + +G KV I+F S N MHVGH R ++GD LA +F G+ Sbjct: 98 QTFSKELANGFR-----AASPQKVIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGH 152 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 +V R +I D G L + Q+A+ H ++L Y Sbjct: 153 DVLRLNHIGDWGTAFGMLITYLQETSQEAI------------------HQLEDLTALYKK 194 Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDIID 278 F E+ ++V A+ D +AL + I +SE F I I+D Sbjct: 195 AHARFAEDSEFKKRSQHNVVALQS---GDAQALALWKQICSVSEKSFQ-----TIYSILD 246 Query: 279 -NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS----TMVGDDVDRPLL--KSDGSY 331 L +G E P ++ D++ K L+ S + + PL+ KSDG Y Sbjct: 247 VELHTRG---ESFYNPFLAEVV--ADLESKNLVTLSDGAKCVFHEAFSIPLMIQKSDGGY 301 Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 Y D+A + + ++ D ++ V S S + + LEA A ++ + Sbjct: 302 NYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLLEATCLAAGYLPSK-GIFSHVGFG 360 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVR 423 L D K R+G+ I LR ++D +G ++++ Sbjct: 361 LVLDTQGRKFKTRSGENIKLRELLDTAVEKAKESLKAHRPDISEEELAYQGPILGINAIK 420 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + L F F K+ + + N + YAY R + I R+ P Sbjct: 421 YADLSSHRINDYVFSFEKML-RFEGNTAMSLLYAYVRIQGIKRRMGLESP---------- 469 Query: 484 VIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 PQE + +E L + L +P +++ P+ L YLY L + F Sbjct: 470 --PQEGPLAVHEPAEEALALTLLRFPEILDLTLRELCPHFLTDYLYALTNKF-------- 519 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N R RL L +++G++++G+++ N + Sbjct: 520 -NAFFRDCHIEGSDSQQERLYLCGLTERTLSTGMHLLGLKTLNHL 563 >gi|302870428|ref|YP_003839065.1| arginyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029] gi|302573287|gb|ADL49489.1| arginyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029] Length = 572 Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 141/591 (23%), Positives = 229/591 (38%), Gaps = 89/591 (15%) Query: 38 RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 R H ++AA+ L+R LG P IA + R + +V ++G GF+NL ++ Sbjct: 28 RRSQHADFQSDAALGLARRLGRPPREIAAEVRERAALADVCAAVEVSGPGFLNLTVAGHA 87 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 L ++S++ G ++ + V +++ N MHVGH R V+GD A + + Sbjct: 88 LGGLVSALAAD-PRLGVPVVAEPETVVVDYSGPNVAKEMHVGHLRSTVIGDAAARTLEWL 146 Query: 158 GYEVTREYYINDAGAQINTLALSVF----WRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 G+ V R ++ D G L + Q L D D G+Y K E Sbjct: 147 GHRVLRANHLGDWGTPFGMLIEHLLDLGEAGAAQELSMGDLD---GFYKAAREKFDDDEA 203 Query: 214 ADKYSSE---LLNFPEEKWLPIVKDYSVQAMMKIIRD-DLKALNIQHDIFISEDDFHRGD 269 + S + L + L + + Q+ + DL + + D F E +H Sbjct: 204 FRERSRQRVVALQGGDPATLRLWRLLVTQSEGYFLTVYDLLDVTLTGDDFRGESSYH--- 260 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLL--K 326 + ++ L R G + D +F VG D + PL+ K Sbjct: 261 -DQLAPTVEELDRLGLLRRS---------------DGADCVFPPGSVGRDGEPLPLIVRK 304 Query: 327 SDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 SDG Y Y A DLA + + G ++YV+G + + + AVAA A Sbjct: 305 SDGGYGYPATDLAALRHRTGALGATRLLYVVGLPQRRHFEMVFAVAAQAGWLTAPARAEH 364 Query: 386 CELVR-LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR-KNSELLDFDFCKV- 442 L DG ++ RAG + L ++ E R L R +N EL + + +V Sbjct: 365 VGFGSILGPDGRMLR--SRAGGSVKLAGLLTEA---VQRATALARERNPELGESEAAEVG 419 Query: 443 --------------KEQSKE-------------NPVFYVQYAYARCRSIFRQAKDIF-PD 474 ++ K+ N Y+QYAY+R RSIFR+A PD Sbjct: 420 RAVGVGAIKYADLSGDRHKDYVLDWERMLSLDGNTAPYLQYAYSRVRSIFRRAGAAARPD 479 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 + L + +E L + L + V+E E ++L YL+ LA F Sbjct: 480 AEVSL-----------AEPAERALAMELVGFAAVVEEVAGGLEFHRLTAYLHRLAVAFSA 528 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P LR + RL L ++ GLN++G+ +P + Sbjct: 529 FYER---CPVLR----AEGPVRESRLVLCDLTGRVLRQGLNLLGIRTPERL 572 >gi|225445067|ref|XP_002280299.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 649 Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 133/576 (23%), Positives = 240/576 (41%), Gaps = 118/576 (20%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGK 119 P TI ++I+ + ++ +AG GF+N+ LS S++ K + +++ GIE + L K Sbjct: 129 PPTIGKVIMENLPPTEMIEKCTLAGPGFVNIKLSTSWIAKNIQKMLIIGIETWAPRLPIK 188 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 + ++F S N MHVGH R ++GDTLA ++ FS +V R ++ D G Q L Sbjct: 189 --RAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSNVDVLRRNHVGDWGTQFGMLIE 246 Query: 180 SVF-----WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234 +F W + A + +G +L + Y + F E+ P K Sbjct: 247 FLFDKFPNWEHASA------------------QAIG-DLQEFYKASKKRFDED---PAFK 284 Query: 235 DYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFH------------RGDP--SP-IRDIID 278 + QA++++ + I IS ++F+ +G+ +P I +I+ Sbjct: 285 GRAQQAVVRLQGGETSYRRAWAQICEISRNEFNKVYQRLGVQLEEKGESFYNPYIPGVIE 344 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 L+ QG V E S+ + ++ G ++ ++KSDG Y Y + D+ Sbjct: 345 QLSNQGLVEE-------SQGARVIHIE-----------GVNIPLIVVKSDGGYNYASTDM 386 Query: 339 A--YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA----------------------AV 374 A +++ E+ + +IYV + + + + A + Sbjct: 387 AALWYRLNEEKA-EWIIYVTDVGQQQHFEMVFSAAKLAGWLPANDNMYPKASHVGFGLVL 445 Query: 375 SEKKAQINVLLCELVRLY--------RDGMPIKMSKRAGDFI--TLRHVVDEVGSDSVRF 424 E + E+VRL R + +A ++ L H + VG +V++ Sbjct: 446 GEDGKRFRTRNTEVVRLVDLLDEAKNRSKSVLIERGKAAEWTEQELEHTAEAVGYGAVKY 505 Query: 425 MMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 L KN+ L ++ F + K N Y+ YA+AR SI R++ D+D +L Sbjct: 506 ADL--KNNRLTNYTFNFDQMLNDKGNTAVYLLYAHARICSIIRKSGK---DID-ELKKTG 559 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 V+ + + E L +HL ++ V+E A P L YLY+L+ F +S+ Sbjct: 560 VLTLDHD---DERGLGLHLLQFSEVVEEACTNLLPNVLCEYLYNLSENFTKFYSN----- 611 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 Q RL L A A ++ +++G+ Sbjct: 612 ----CQVVGSAEETSRLLLCEATAVVMRKCFHLLGI 643 >gi|291538731|emb|CBL11842.1| arginyl-tRNA synthetase [Roseburia intestinalis XB6B4] Length = 640 Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 124/597 (20%), Positives = 241/597 (40%), Gaps = 81/597 (13%) Query: 36 RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95 RP C + N AM ++ P IA+ + A++ GF+NL L Sbjct: 78 RPDLCEY---QCNGAMAAAKEYKKAPFMIADEVAAKLAETSMFSMAESVKPGFLNLKLDE 134 Query: 96 SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155 ++L ++ + +G + I++ N P+HVGH R A++G+++ + Sbjct: 135 TFLASYVADMQADEGRFGCEKAENPKTIMIDYGGPNVAKPLHVGHLRSAIIGESIKRIGK 194 Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALY---NNDSDLP----------EGYYP 202 F G++V + ++ D G Q+ + + R + +Y N + + P E YP Sbjct: 195 FVGHKVIGDVHLGDWGLQMGLIITELKLRQPELVYFDENFEGEYPKEAPFTISELEEIYP 254 Query: 203 GVYLK----HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 K KE A + + EL N K + + + + ++ + + LN+ ++ Sbjct: 255 TASKKSKEDEAYKEAAMQATYELQN--GRKGYQALLSHILNVSVTDLKKNYENLNVSFEL 312 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + E D P+ ++ + D+ YV +G L K D D K++ M+ Sbjct: 313 WKGESDAQPYIPAMVQKMKDD--GFAYVSDGALV-----VDVKEDTDTKEI--PPCMI-- 361 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 LKSDG+ Y DLA + E D +IYV+ + ++ A Sbjct: 362 ------LKSDGASLYNTTDLATIVWREEDYDPDEIIYVVDKRQELHFVQVFRCARKTGLV 415 Query: 378 KAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + + + +DG P K R G + L ++V E+ ++ ++ + +K+ E L Sbjct: 416 KPETELKFLGFGTMNGKDGKPFKT--RDGGVMRLEYLVSEIDNEMLKKITENQKSKENLG 473 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVIPQ-------- 487 + KE +K + ++Y ++ +KD D+D F F N P Sbjct: 474 ISEEEAKETAKTVALAAIKYGDLSNQA----SKDYIFDIDRFTSFEGNTGPYILYTIVRI 529 Query: 488 -------------------ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 S SE L++ ++++ VI+ A P+K+ Y+YDL Sbjct: 530 KSILHKYHDLGKSAEGAVITSVHSESEKNLMLEISKFNAVIDGAFADTAPHKICSYIYDL 589 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A+ F+ + + + + + ++L+ S++ + +N++G +P M Sbjct: 590 ANAFNSFYHE------TKIMSEEDETVQKSYIRLLELTKSVLETSINLLGFSAPERM 640 >gi|268574474|ref|XP_002642214.1| C. briggsae CBR-RRT-1 protein [Caenorhabditis briggsae] gi|187025216|emb|CAP35683.1| CBR-RARS-1 protein [Caenorhabditis briggsae AF16] Length = 710 Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 140/577 (24%), Positives = 248/577 (42%), Gaps = 77/577 (13%) Query: 49 AAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVV 107 AA++ + + P + + I A++ + D V+ + + GFIN++L+ YLRK +SS+ + Sbjct: 171 AAILKATGINKKPGDVGKEIHAKLPENIDFVEKIAVMPAGFINVFLNADYLRKQISSLAL 230 Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167 +GI + + K +V ++F S N MHVGH R ++GD++ L GY+V R +I Sbjct: 231 NGISLPK--VAK-KRVLVDFSSPNIAKEMHVGHLRSTIIGDSICRLFEAVGYDVLRVNHI 287 Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227 D G Q L ++ R+ L LP+ + K K E F + Sbjct: 288 GDWGTQFGMLIAHLYDRFPDFL----KKLPDISDLQAFYKESKKRF-----DEDEQFKKR 338 Query: 228 KWLPIVKDYS-----VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282 + +VK S VQA I K I +D I+D+ Sbjct: 339 AYECVVKLQSRDGEIVQAWNTICDVSKKYNQIVYDHL----------DIKIKDV-----G 383 Query: 283 QGYVYEGILPPPKSKTTQKCDMDRK----QLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 + + + ++ K K DM RK Q++F + G DV ++KSDG +TY +DL Sbjct: 384 ESFYQDKMVELVKWIKENKPDMLRKEEGRQIMFPT---GCDVPLTVVKSDGGFTYDTSDL 440 Query: 339 AYFKCKY-ERGFDNMIYVM--------------GSDHSGY---VKRLEAV--AAAVSEKK 378 A K + E D IYV+ G D Y +R+E V + + K Sbjct: 441 AALKYRMLEEKCDWNIYVVDAGQNLHLETVYAAGRDFGWYDENTQRVEHVGFGLVLGDDK 500 Query: 379 AQINVLLCELVR---LYRDGM---PIKMSKRAGDFIT----LRHVVDEVGSDSVRFMMLW 428 + E VR L +G+ K+ ++ D + L D V V++ L Sbjct: 501 KKFKTRSGETVRLLDLLSEGVKRATEKLKEKGRDAVMTEEELAAARDAVAFGCVKYADLS 560 Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488 ++ F F ++ + + N Y+ YAYAR RSI R + L L ++P Sbjct: 561 HTRTQDYIFSFDRMLD-DRGNTAVYLLYAYARIRSIVRTSGVTDSQLADYLAKTPILPLN 619 Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548 + + ++ L++ ++ ++ + +++ Y+Y+LA++FH ++ E + Sbjct: 620 HPAELKLAKQLLKLSDCVLLVLDSLML---HQMCDYVYNLATLFHDFYN---ECYVIERK 673 Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + RL L A++I++ I+G+ +M Sbjct: 674 EGEPVVVHFHRLALCEVTANVISTCFKILGIREVPKM 710 >gi|209875223|ref|XP_002139054.1| arginyl-tRNA synthetase family protein [Cryptosporidium muris RN66] gi|209554660|gb|EEA04705.1| arginyl-tRNA synthetase family protein [Cryptosporidium muris RN66] Length = 603 Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 144/606 (23%), Positives = 256/606 (42%), Gaps = 112/606 (18%) Query: 43 GHLSTNAAMILSRPLGLD-----PLTIAELIVARIKIDPD----VDSVFIAGKGFINLYL 93 G N+ M++ +G P I E I I DP+ DS+ +A +GFI + + Sbjct: 37 GDYQCNSGMLIFSTIGKSMGMKSPREIGEKIKQFIMSDPNSNFLFDSIIVAPQGFITVKI 96 Query: 94 SPSYLRKILSSIVVSG-IEYG------RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 S +LRK L +I+ G I+ + + K KV ++F S N MHVGH R ++ Sbjct: 97 STDFLRKNLQNILQRGEIQVTLSSSPVKIIEDKKLKVLVDFSSPNIAKEMHVGHLRSTII 156 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN-DSDLPEGYYPGVY 205 GDT+ + + GYEV R ++ D G Q L Y + Y + S++PE Sbjct: 157 GDTICRIFEYLGYEVFRINHVGDWGTQFGMLI-----EYLKEQYPDYTSNIPE------- 204 Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISEDD 264 +L + Y S F ++ P K S + ++K+ D A I IS + Sbjct: 205 ----ISDLQEFYRSAKKKFDQD---PEFKLRSQKVVVKLQGGDPTARAAWKKICEISRIE 257 Query: 265 FHRGDPSPIRDIIDNLARQGY---VYEGILPPPKSKTTQKCDM---DRKQLLFRSTMVGD 318 F + + D + N+ + Y Y ++P K +K + D Q +F S + Sbjct: 258 FQK-----VYDRL-NIHIEEYGESFYNDLIPEVILKMKEKGIIQLDDGAQCIFTSV---N 308 Query: 319 DVDRPLLKSDGSYTYFAADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV-- 374 ++ +KSDG Y Y + DLA Y++ K R D +IY+ S + ++ VA + Sbjct: 309 NIPLMAVKSDGGYGYDSTDLAAIYYRLKEIRA-DWVIYITDSGQEEHFLKIFEVAKIMEW 367 Query: 375 -SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------- 416 + K +++ + +++ DG K R+GD + L ++DE Sbjct: 368 HNPPKTRLDFVGFGVIQ-GEDGK--KFKTRSGDTVKLVELLDEAVTRAYNELINRRLQNA 424 Query: 417 -------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457 +G +V++ + + F F ++ + K N Y+ YA Sbjct: 425 KINGNIEYEDDDLKEMAKKIGYAAVKYFDMKQNRLTNYKFSFDRMLD-PKGNTAVYLLYA 483 Query: 458 YARCRSIFRQAK---DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514 YAR +IFR++ D D++ L ++ Q+SE E + + + +P V + + Sbjct: 484 YARLCAIFRRSGLNLDNKSDIEI-LSSYSINIQQSE----ERLIALKIIRFPEVFDGIIV 538 Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 +L Y Y+L + ++ R + N+ ++ RL L + ++ L Sbjct: 539 DLHINRLTEYCYELCELVAQFYAS------CRILDCNDPEIRQSRLALCFIIKKVLLVAL 592 Query: 575 NIIGVE 580 N++G+E Sbjct: 593 NLLGIE 598 >gi|322513913|ref|ZP_08066990.1| arginine--tRNA ligase [Actinobacillus ureae ATCC 25976] gi|322120248|gb|EFX92201.1| arginine--tRNA ligase [Actinobacillus ureae ATCC 25976] Length = 584 Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 142/623 (22%), Positives = 252/623 (40%), Gaps = 84/623 (13%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 Y+F + L + +K+ E + ++ + G N AM ++ LG++P Sbjct: 7 YIFVNIQQILSDKIKQAMIAAGAESNV--EPLVRQSGKPEFGDYQANGAMGAAKKLGMNP 64 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 A+ I+ ++ D + IAG GFIN++L+ +L +S + + +G T Sbjct: 65 REFAQKILDNADLNGIADKLEIAGPGFINIFLNQQWLAS-QASEALQAVNFGIKTANPQT 123 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-ALS 180 V I++ S N MHVGH R ++GD + + F G V R ++ D G Q L A Sbjct: 124 IV-IDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNNVIRANHVGDWGTQFGMLIAYL 182 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 + A SDL E +Y KE D S E+ F E+ +VK S Sbjct: 183 EKMENEHASQMELSDL-EAFY------RAAKEHYD--SDEV--FAEKARNYVVKLQSGDE 231 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPS-PIRDIIDNLARQGYVYEGILPPPKSKTT 299 + + L + + H+ ++++ R + + +D++ +Y +LP + Sbjct: 232 YCRTMWKKLVDITMHHN----QENYDRLNVTLSEKDVMGE-----SLYNPMLPEIVADLK 282 Query: 300 QK---CDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNM 352 K + D ++F GD + + K DG + Y D+A K +YE D + Sbjct: 283 AKGLAVEDDGALVVFLEEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLNADRV 342 Query: 353 IYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 + S + ++++ + A V E + + + L +DG P K R+G + Sbjct: 343 LVFSDSRQAQHMQQAWLITRKAGYVPESFSLEHPFFGMM--LGKDGKPFKT--RSGGTVK 398 Query: 410 LRHVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442 L+ ++DE V SV++ L + + FD+ + Sbjct: 399 LKDLLDEAVERADKLISERSTDLTAEEKAAVVEAVAIGSVKYSDLSKNRTTDYVFDWDNM 458 Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 + N Y+QYAY R RSIF +A L+ ++ + E L V L Sbjct: 459 L-TFEGNTAPYMQYAYTRIRSIFNRAGINANGLNGEI---------GLIEDKERALAVKL 508 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 ++ V+ P+ L YLY+LA F + P L + RL+L Sbjct: 509 LQFEEVLNGVAKDGMPHILCQYLYELAGAFSSFY---EACPMLN----AEENVKNSRLRL 561 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 A + GL+++G+++ +M Sbjct: 562 ATLTAKTLKQGLDLLGIKTIEKM 584 >gi|73953490|ref|XP_866915.1| PREDICTED: similar to arginyl-tRNA synthetase isoform 2 [Canis familiaris] Length = 692 Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 88/344 (25%), Positives = 165/344 (47%), Gaps = 38/344 (11%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S+ L ++P IAE I + + V+ V IAG GFIN++L + Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECVERVEIAGPGFINVHLRKDF 170 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + L++++V+G++ +G+ KV ++F S N MHVGH R ++G+++ L F+ Sbjct: 171 VSQQLTNLLVNGVQLP--ALGENKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFA 228 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215 GY+V R ++ D G Q L + ++ L + DL + +Y + +E Sbjct: 229 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFK 287 Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SP 272 K + + + + K I+K + + + + R + + DI + E RG+ Sbjct: 288 KRAYQCVVLLQSKNPDIIKAWKL--ICDVSRQEFNKIYDALDISLIE----RGESFYQDR 341 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + D++ +G+V + D D ++++F + G V ++KSDG YT Sbjct: 342 MNDVVKEFEDKGFV--------------QVD-DGRKIVF---VPGCSVPLTIVKSDGGYT 383 Query: 333 YFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375 Y +DLA K + +E D +IYV+ + S + + + A + Sbjct: 384 YDTSDLAALKQRLFEEKADMIIYVVDNGQSVHFQTIFGAAQMIG 427 >gi|312873557|ref|ZP_07733604.1| arginine--tRNA ligase [Lactobacillus iners LEAF 2052A-d] gi|311090810|gb|EFQ49207.1| arginine--tRNA ligase [Lactobacillus iners LEAF 2052A-d] Length = 558 Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 141/601 (23%), Positives = 253/601 (42%), Gaps = 115/601 (19%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IERP++ G + L++ +P IA + A++ ++ + + G +IN Sbjct: 25 LIERPKNVKLGDYAF-PTFALAKIEHKNPAVIASELAAKL-VNDNFAEIEAVGP-YINFA 81 Query: 93 LSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + L + L ++ +YG +G V I+ S N PM +GH R V+G+++A Sbjct: 82 IDHAKLVSVTLKKVLADQDKYGDQDNNQGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVY----- 205 ++ G+ + Y+ D G Q L + W ++A+ + YY + Sbjct: 141 KILQKIGFTPIKINYLGDYGTQFGKLITAYKLWGNEEAVKKDPITNLFHYYVKFHEEAEK 200 Query: 206 ---LKHVGK------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 L+ G+ E D + EL +W ++ S+Q +I ++ L + Sbjct: 201 DPKLEDEGRAWFKKLEEGDAEAVELW-----QWF---REVSLQEFNRIYKE----LGVTF 248 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D + E F+ ++ ++D L + ++E S+ Q D+D Sbjct: 249 DSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQVVDLD----------- 286 Query: 317 GDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372 DD + L LKSDG+ Y DLA Y K +Y+ F +YV G++ SG+ K+L+ V Sbjct: 287 -DDENPALILKSDGTSLYITRDLAAALYRKKEYD--FAMSLYVAGNEQSGHFKQLKQVLG 343 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL---------------------- 410 + Q ++ + ++G K+S R G+ + L Sbjct: 344 KMG-YDWQKDIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVKLALEQIEAKNPNL 400 Query: 411 ---RHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSI 464 V +VG +V F L KN L +FDF V+ + P YVQY AR +SI Sbjct: 401 ANKEQVAHQVGVGAVIFHDL--KNERLDNFDFNLNEVVRFEGDTGP--YVQYTNARAQSI 456 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R+A D L D + +A++P +I+ A EP +A Y Sbjct: 457 LRKANVAIDDTKLAL-----------SDDWAFAVAKDIADFPAIIQKAFEKFEPSVIAKY 505 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 +L+ F+ ++++ +R + ++ RL LV A + ++ L ++GV++P E Sbjct: 506 SLNLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESLRLLGVDAPKE 557 Query: 585 M 585 M Sbjct: 558 M 558 >gi|241668933|ref|ZP_04756511.1| arginyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877465|ref|ZP_05250175.1| arginyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843486|gb|EET21900.1| arginyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 581 Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 130/598 (21%), Positives = 247/598 (41%), Gaps = 107/598 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH N AM L++ PL IA+ I+ +I+ + + +A GFIN+ LS +L Sbjct: 36 GHFQCNGAMPLAKFAKKAPLVIAQEIIEQIENEDIFYKLEVAKPGFINISLSNKFLAATT 95 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S ++G K KV ++F N PMHVGH R A++GD L L F V Sbjct: 96 DKFLNSS-KFGVQDNTKPKKVVLDFGGPNVAKPMHVGHIRSALLGDALQRLHRFYNDNVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH---VGKELADKY-- 217 + ++ D G Q+ L + +Y +++ Y G Y K +ELA+ Y Sbjct: 155 SDVHLGDWGTQMGMLIEEIKLESPDLVYFDEN------YNGEYPKESPVTVQELAEIYPR 208 Query: 218 -----SSELLNFPE-----------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 S+++ + K + + V+ ++ I+ D +L++ D+++ Sbjct: 209 ASKRCKSDIIEMDKARQATFELQQGRKGYVALWQHFVRISIEAIKKDFDSLDVHFDLWLG 268 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E D ++ + ++I ++YE + D +++ + Sbjct: 269 ESDANKF----VDEMIAYFKTNKFIYE-------DEGAWVIDTNKEGV------------ 305 Query: 322 RPL--LKSDGSYTYFAADLA-YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378 PL +K DG Y DLA ++ + D +IYV+ S + K++ +VA K+ Sbjct: 306 PPLIVIKKDGGVMYGTTDLATLWQRAKDLNPDEIIYVVDKRQSLHFKQVFSVA-----KR 360 Query: 379 AQINVLLCELVRLY------RDGMPIKMSKRAGDFITL--------------------RH 412 ++ C+L + +DG P K R G + L + Sbjct: 361 TKVVSEECKLKHVAFGTVNGKDGRPFKT--REGGVMHLSDLISQAKNYAHKRMPDENDEN 418 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDI 471 + +++ +++F L + FD K + + K P Y+ Y R ++I R+ + Sbjct: 419 ITNQIAMATIKFGDLVNNYANDYIFDLEKFAQYEGKTGP--YLLYTTVRAKAILRK---V 473 Query: 472 FPDLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 F D ++D+ N + +E + E +L + L ++P + A +P+ + Y Y Sbjct: 474 FGD-NYDI---NSLAKEYRITKADNEHEEKLQLQLIQFPIAVSRAYENSQPHHICEYAYS 529 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA+ F+ + + + N+ +L R+ L A + +++G+ P M Sbjct: 530 LANSFNRFYVN------CPIMNLNDEQLKKSRIALCMATVKAMTIATDLLGISIPERM 581 >gi|326574023|gb|EGE23972.1| arginyl-tRNA synthetase [Moraxella catarrhalis CO72] Length = 575 Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 136/601 (22%), Positives = 240/601 (39%), Gaps = 100/601 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ LG++P A+ ++ + ID + + IAG GFIN++ Sbjct: 27 LVRQSNKIQFGDYQANGIMGAAKKLGINPREFAQTVLDHLSIDDIAEKLEIAGPGFINIF 86 Query: 93 LSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 L ++ K + +S G+ +N V +++ S N MHVGH R ++GD+ Sbjct: 87 LKNEWISKHANQANISRTLGVNAAQN-----DTVVVDYSSPNVAKEMHVGHLRSTIIGDS 141 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND------SDLPEGYYPG 203 + + F G V R ++ D G Q L Y + + N+D SDL Y Sbjct: 142 VVRTLEFLGNTVIRANHVGDWGTQFGMLI-----AYLEKVQNDDVKDLDLSDLEAFYRAA 196 Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 + + A K + ++ L +Y + K++ D+ QH Sbjct: 197 KHAYDSDEAFAKKSRNYVVK------LQSGDEYCLTMWRKLV--DITMAQCQH------- 241 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFR---STMVG 317 + R + + RD D + +Y +LP K + D ++F + G Sbjct: 242 TYDRLNVTLTRD--DTMGES--LYNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAG 297 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 D + + K DG Y Y D+A +Y + + ++ +D + L A A + + Sbjct: 298 DPMGVIIQKKDGGYLYTTTDIAAAAYRYHTLHADRV-ILFTDAR---QTLHAQQAWLITR 353 Query: 378 KAQI--NVLLCEL----VRLYRDGMPIKMSKRAGDFITL--------------------- 410 KA + + E + L +DG P K R G + L Sbjct: 354 KAGFVPDEFVMEHFTFGMMLGKDGKPFKT--RTGGTVKLADLLDEAIERATTLIEQKNPD 411 Query: 411 ------RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 R VV+ V +V++ L + + FD+ + + N Y+QYAY R RSI Sbjct: 412 LSAEEKRAVVEAVAIGAVKYSDLSKNRNTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSI 470 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 F +A LD ++ E + E L V L ++ V+ P+ L Y Sbjct: 471 FARAG-----LDMADIGGEIVIHEDK----ERALAVKLLQFEEVLLLVAKDGMPHLLCQY 521 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 L++LA +F + P L +++ K RL+L A + GL ++G+++ + Sbjct: 522 LFELAGIFSSFY---EACPIL----SSDDKTKTSRLRLAALTAKTLKQGLQLLGIKTVEK 574 Query: 585 M 585 M Sbjct: 575 M 575 >gi|312872199|ref|ZP_07732272.1| arginine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1] gi|311092283|gb|EFQ50654.1| arginine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1] Length = 558 Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 142/601 (23%), Positives = 250/601 (41%), Gaps = 115/601 (19%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IERP++ G + L++ +P IA + A++ D + V + +IN Sbjct: 25 LIERPKNVKLGDYAF-PTFALAKIEHKNPAVIASELAAKLVNDNFAEIVAVGP--YINFA 81 Query: 93 LSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + L + L ++ +YG +G V I+ S N PM +GH R V+G+++A Sbjct: 82 IDHAKLVSVTLKKVLADQDKYGDQDNNQGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVY----- 205 ++ G+ + Y+ D G Q L + W ++A+ + YY + Sbjct: 141 KILQKIGFTPIKINYLGDYGTQFGKLITAYKLWGNEEAVKKDPITNLFHYYVKFHEEAEK 200 Query: 206 ---LKHVGK------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 L+ G+ E D + EL +W ++ S+Q +I K L + Sbjct: 201 DPKLEDEGRAWFKKLEEGDAEAVELW-----QWF---REVSLQEFNRI----YKELGVTF 248 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D + E F+ ++ ++D L + ++E S+ Q D+D Sbjct: 249 DSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQVVDLD----------- 286 Query: 317 GDDVDRPL-LKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372 DD + L LKSDG+ Y DLA Y K +Y+ F +YV G++ SG+ K+L+ V Sbjct: 287 -DDENPALILKSDGTSLYITRDLAAALYRKKEYD--FAMSLYVAGNEQSGHFKQLKQVLG 343 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL---------------------- 410 + Q ++ + ++G K+S R G+ + L Sbjct: 344 KMG-YDWQKDIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVKLALEQIEAKNPNL 400 Query: 411 ---RHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSI 464 V +VG +V F L KN L +FDF V+ + P YVQY AR +SI Sbjct: 401 ANKEQVAHQVGVGAVIFHDL--KNERLDNFDFNLNEVVRFEGDTGP--YVQYTNARAQSI 456 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R+ D L D + +A++P +I+ A EP +A Y Sbjct: 457 LRKVNVAIDDTKLAL-----------SDDWAFAVAKDIADFPAIIQKAFEKFEPSVIAKY 505 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 +L+ F+ ++++ +R + ++ RL LV A + ++ L ++GV++P E Sbjct: 506 SLNLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESLRLLGVDAPKE 557 Query: 585 M 585 M Sbjct: 558 M 558 >gi|326561584|gb|EGE11925.1| arginyl-tRNA synthetase [Moraxella catarrhalis 46P47B1] Length = 567 Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 136/601 (22%), Positives = 240/601 (39%), Gaps = 100/601 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ LG++P A+ ++ + ID + + IAG GFIN++ Sbjct: 19 LVRQSNKIQFGDYQANGIMGAAKKLGINPREFAQTVLDHLSIDDIAEKLEIAGPGFINIF 78 Query: 93 LSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 L ++ K + +S G+ +N V +++ S N MHVGH R ++GD+ Sbjct: 79 LKNEWISKHANQANISRTLGVNAAQN-----DTVVVDYSSPNVAKEMHVGHLRSTIIGDS 133 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND------SDLPEGYYPG 203 + + F G V R ++ D G Q L Y + + N+D SDL Y Sbjct: 134 VVRTLEFLGNTVIRANHVGDWGTQFGMLI-----AYLEKVQNDDVKDLDLSDLEAFYRAA 188 Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 + + A K + ++ L +Y + K++ D+ QH Sbjct: 189 KHAYDSDEAFAKKSRNYVVK------LQSGDEYCLTMWRKLV--DITMAQCQH------- 233 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFR---STMVG 317 + R + + RD D + +Y +LP K + D ++F + G Sbjct: 234 TYDRLNVTLTRD--DTMGES--LYNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAG 289 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 D + + K DG Y Y D+A +Y + + ++ +D + L A A + + Sbjct: 290 DPMGVIIQKKDGGYLYTTTDIAAAAYRYHTLHADRV-ILFTDAR---QTLHAQQAWLITR 345 Query: 378 KAQI--NVLLCEL----VRLYRDGMPIKMSKRAGDFITL--------------------- 410 KA + + E + L +DG P K R G + L Sbjct: 346 KAGFVPDEFVMEHFTFGMMLGKDGKPFKT--RTGGTVKLADLLDEAIERATTLIEQKNPD 403 Query: 411 ------RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 R VV+ V +V++ L + + FD+ + + N Y+QYAY R RSI Sbjct: 404 LSAEEKRAVVEAVAIGAVKYSDLSKNRNTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSI 462 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 F +A LD ++ E + E L V L ++ V+ P+ L Y Sbjct: 463 FARA-----GLDMADIGGEIVIHEDK----ERALAVKLLQFEEVLLLVAKDGMPHLLCQY 513 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 L++LA +F + P L +++ K RL+L A + GL ++G+++ + Sbjct: 514 LFELAGIFSSFY---EACPIL----SSDDKTKTSRLRLAALTAKTLKQGLQLLGIKTVEK 566 Query: 585 M 585 M Sbjct: 567 M 567 >gi|326569480|gb|EGE19540.1| arginyl-tRNA synthetase [Moraxella catarrhalis BC8] Length = 575 Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 136/601 (22%), Positives = 240/601 (39%), Gaps = 100/601 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ LG++P A+ ++ + ID + + IAG GFIN++ Sbjct: 27 LVRQSNKIQFGDYQANGIMGAAKKLGINPREFAQTVLDHLSIDDIAEKLEIAGPGFINIF 86 Query: 93 LSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 L ++ K + +S G+ +N V +++ S N MHVGH R ++GD+ Sbjct: 87 LKNEWISKHANQANISRTLGVNAAQN-----DTVVVDYSSPNVAKEMHVGHLRSTIIGDS 141 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND------SDLPEGYYPG 203 + + F G V R ++ D G Q L Y + + N+D SDL Y Sbjct: 142 VVRTLEFLGNTVIRANHVGDWGTQFGMLI-----AYLEKVQNDDVKNLDLSDLEAFYRAA 196 Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 + + A K + ++ L +Y + K++ D+ QH Sbjct: 197 KHAYDSDEAFAKKSRNYVVK------LQSGDEYCLTMWRKLV--DITMAQCQH------- 241 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFR---STMVG 317 + R + + RD D + +Y +LP K + D ++F + G Sbjct: 242 TYDRLNVTLTRD--DTMGES--LYNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAG 297 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 D + + K DG Y Y D+A +Y + + ++ +D + L A A + + Sbjct: 298 DPMGVIIQKKDGGYLYTTTDIAAAAYRYHTLHADRV-ILFTDAR---QTLHAQQAWLITR 353 Query: 378 KAQI--NVLLCEL----VRLYRDGMPIKMSKRAGDFITL--------------------- 410 KA + + E + L +DG P K R G + L Sbjct: 354 KAGFVPDEFVMEHFTFGMMLGKDGKPFKT--RTGGTVKLADLLDEAIERATTLIEQKNPD 411 Query: 411 ------RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 R VV+ V +V++ L + + FD+ + + N Y+QYAY R RSI Sbjct: 412 LSAEEKRAVVEAVAIGAVKYSDLSKNRNTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSI 470 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 F +A LD ++ E + E L V L ++ V+ P+ L Y Sbjct: 471 FARAG-----LDMADIGGEIVIHEDK----ERALAVKLLQFEEVLLLVAKDGMPHLLCQY 521 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 L++LA +F + P L +++ K RL+L A + GL ++G+++ + Sbjct: 522 LFELAGIFSSFY---EACPIL----SSDDKTKTSRLRLAALTAKTLKQGLQLLGIKTVEK 574 Query: 585 M 585 M Sbjct: 575 M 575 >gi|253682317|ref|ZP_04863114.1| arginine--tRNA ligase [Clostridium botulinum D str. 1873] gi|253562029|gb|EES91481.1| arginine--tRNA ligase [Clostridium botulinum D str. 1873] Length = 563 Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 141/584 (24%), Positives = 251/584 (42%), Gaps = 115/584 (19%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIE 111 L++ P IAE + ++I + + V G ++N ++ S+++ L+ ++ G Sbjct: 44 LAKAFRKAPNMIAEELSSKIN-NEGFEKVVALGP-YLNFFMDKGSFVKDTLNKVIEEGER 101 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG + GKG V I++ S N P HVGH +G++L ++ F GY ++ D G Sbjct: 102 YGSSEEGKGKNVTIDYSSPNIAKPFHVGHLFSTAIGNSLYRMLNFEGYNSIGINHLGDWG 161 Query: 172 AQINTLALSVF--WRYQQALYNNDSDLPEGYYPGVYLK-HVGKE----LADK---YSSEL 221 Q L +S + W + AL + P +Y+K H E L D+ Y +L Sbjct: 162 TQFGKL-ISAYKRWVDEDALEKD----PIKELLRIYVKFHDEAEKDPSLEDEGRMYFKKL 216 Query: 222 LNFPEEK---WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 + +E+ W K+ S++ K+ + L ++ D + E ++ S I++I Sbjct: 217 EDGEKEEVELW-ERFKNLSLKEFKKV----YELLGVKFDSYAGESFYNDKMDSVIKEI-- 269 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRP---LLKSDGSY 331 D K +L S ++ DD + P ++K DG+ Sbjct: 270 --------------------------DEKGILVESNGAKVVMMDDENIPPCIIVKGDGAT 303 Query: 332 TYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCE 387 Y DLA Y K Y+ F IYV+GSD S + K++ + A + Sbjct: 304 IYATRDLAAAFYRKKNYD--FHKSIYVVGSDQSLHFKQVFKTIEKMGYNWADDCKHVAFG 361 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD--------- 438 LVR K+S R G I L +++E S ++ ++ KN EL + + Sbjct: 362 LVRF----ADKKLSTRKGQVIFLEDLLNESVSKTLE--VINEKNPELKNKEEVAKKVGIG 415 Query: 439 ---FCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 F +K + +++ VF YVQY YAR +SI R+A ++ +++F Sbjct: 416 AIIFTYLKNKREKDIVFNWNEMLNFEGETGPYVQYTYARGKSILRRAGEVQGEVNF---- 471 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + + EF+ ++++ +L E V A EP + Y+ D+A F+ ++ Sbjct: 472 -AALNSQEEFNL--VKVLGNLKEEVLV---AIDKLEPSIVTRYIIDVAKAFNKFYNAHN- 524 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + RL+LV A +I +GL+++G+E EM Sbjct: 525 -----IMATEDMAVKNARLKLVEATCQVIKNGLDLLGIEVVEEM 563 >gi|126273989|ref|XP_001387368.1| arginyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054] gi|126213238|gb|EAZ63345.1| arginyl-tRNA synthetase [Pichia stipitis CBS 6054] Length = 603 Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 125/541 (23%), Positives = 219/541 (40%), Gaps = 90/541 (16%) Query: 88 FINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 F+ + + + L ++ + EYG +G KV +EF S N P H GH R ++ Sbjct: 110 FLQFFFNKTLLYNLVIGDALARKTEYGALPLGLNKKVIVEFSSPNIAKPFHAGHLRSTII 169 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGV 204 G L++L +G+ VTR Y+ D G Q LA+ F RY ++ L ++ P + V Sbjct: 170 GGFLSNLYEKAGWNVTRINYLGDWGKQFGLLAVG-FERYGSEEKLASD----PINHLFEV 224 Query: 205 YLK-----------HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN 253 Y+K E A Y ++ + EE L I K + ++ K I D LN Sbjct: 225 YVKINQDITAEGETSPTNEAARLYFKKMEDGDEEA-LKIWKRFRELSIEKYI-DTYARLN 282 Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNL-ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312 I +D++ E P + + + +G ++E DR L Sbjct: 283 IHYDVYSGESQV----PKELMKMATKIFEEKGLIHE----------------DRGAKLID 322 Query: 313 STMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS--------- 361 T + + L+ KSDG+ Y D+ +Y FD MIYV+ S Sbjct: 323 LTKFNKKLGKTLVEKSDGTSLYLTRDVGEAMKRYNTYKFDKMIYVIASQQDLHCAQFFEV 382 Query: 362 ------GYVKRLEAV----AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 +VK +E V +S +K + V L ++ ++ M M + + Sbjct: 383 LKQMGFEWVKNMEHVNFGMVLGMSTRKGTV-VFLDNILEETKEKMHEVMKANEAKYAQIE 441 Query: 412 ---HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQ 467 + D VG +V + K +F + ++ + P Y+QYA++R S+ R+ Sbjct: 442 DPDKIADLVGISAVMIQDMQAKRINNYEFKWDRMTSFEGDTGP--YLQYAHSRLSSVQRK 499 Query: 468 AKDIFPDL---DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 + DL ++DL + LI LA+YP I+ A EP + Y Sbjct: 500 SGYTEEDLATANYDLL----------VEPCAANLIRTLAQYPDTIKKALKTHEPSTIVTY 549 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 L++L + + + +V ++L + RL L + ++ +G+ ++G+ + Sbjct: 550 LFNLTHIVSQCYD-------ILWVAGQEKELAVARLALYASAKQVLYNGMTLLGLTPVDR 602 Query: 585 M 585 M Sbjct: 603 M 603 >gi|284034982|ref|YP_003384912.1| arginyl-tRNA synthetase [Spirosoma linguale DSM 74] gi|283814275|gb|ADB36113.1| arginyl-tRNA synthetase [Spirosoma linguale DSM 74] Length = 599 Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 140/607 (23%), Positives = 236/607 (38%), Gaps = 143/607 (23%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P I + I + + V S F +GF+N+ L+ + ++L+ + +G L KG Sbjct: 54 PAQIGQAIGNWLVENSPVVSKFNVVQGFLNISLADAAWVEVLNDMATDA-SFG-TLPSKG 111 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLA 178 V +EF S N P+H+GH R +GD+++ ++ +GY+V + +ND G I + LA Sbjct: 112 QSVMVEFSSPNTNKPLHLGHLRNNFLGDSVSRILVANGYDVVKTCIVNDRGVHICKSMLA 171 Query: 179 LSVF-------WRYQQALYNNDSDLPEGYY---PGVYLKHVGKELADKYSSELLNFPEEK 228 +F W + L YY Y V + +A + E+ EK Sbjct: 172 YRMFGSDASGQWETPETSGLKGDHLIGKYYVLFDKAYKAQVEEMVAQGTTKEV----AEK 227 Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288 P++++ VQ M+++ + +GDP + + L +VY Sbjct: 228 TAPLMQE--VQQMLRL--------------------WEQGDPETVA-LWKKL--NNWVYA 262 Query: 289 GILPPPKS------KTTQKCDM-----------DRKQLLFRST-------MVGDDVDRPL 324 G KS KT + + +K + +R + + +D+ L Sbjct: 263 GFDVTYKSIGVSFDKTYYESNTYLLGKEIVEEGIQKGVFYRKDDGSVWIDLTEEGLDQKL 322 Query: 325 -LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 L+ DG+ Y DL K++ G D I+V+G+ E+ N Sbjct: 323 VLRGDGTSVYITQDLGTTDLKFQDFGSDRQIWVVGN-----------------EQDYHFN 365 Query: 383 VLLCELVRL---YRDGM----------PI-KMSKRAGDFITLRHVVDEVG---------- 418 VL L RL Y +G+ P KM R G + ++ E Sbjct: 366 VLFAILRRLGRPYANGLYHLSYGMVDLPTGKMKSREGTVVDADDLIQETTDAASNAADEA 425 Query: 419 --------SDSVRFMMLWRKNSELLDFDFCKVKEQSKE--NPVF----------YVQYAY 458 SD + + L + KV Q + NP Y+QY + Sbjct: 426 AKGKLDEFSDEEKKALFQMLGLGALKYYLLKVDPQKRMQFNPAESVDLHGNTGPYIQYVH 485 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 AR +SI R+A + LD + + D E QLI+ L++YP+ I A P Sbjct: 486 ARIQSILRKAAETGVTLDGTVMATGL-------DDVEQQLILLLSQYPQRIAEAGATYAP 538 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 +A Y YDLA +F+ + +L ++ + RL L V I + ++G Sbjct: 539 SYIAQYAYDLAKIFNQFYD------KLSILKETDSVKLHSRLVLSKLVGETIRKAMGLLG 592 Query: 579 VESPNEM 585 +E P++M Sbjct: 593 IEVPSKM 599 >gi|88809846|ref|ZP_01125352.1| arginyl-tRNA synthetase [Synechococcus sp. WH 7805] gi|88786230|gb|EAR17391.1| arginyl-tRNA synthetase [Synechococcus sp. WH 7805] Length = 590 Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 143/600 (23%), Positives = 236/600 (39%), Gaps = 106/600 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98 G N A+ L++PL P IA IV +++ DP + IAG GFINL + P L Sbjct: 40 GDFQANGALPLAKPLKQAPRQIATAIVEQLQADPAFTDLCLEPQIAGPGFINLTIRPERL 99 Query: 99 RKILSSIVVSGIEYGRNLIGKGTKVN-----IEFVSANPTGPMHVGHCRCAVVGDTLASL 153 +S+ G +G VN ++F S N MHVGH R ++GD+LA + Sbjct: 100 AAEVSA------RLGDERLGVPAVVNEAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARV 153 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKE 212 + F G+ V R ++ D G Q L + +AL D+ DL + Sbjct: 154 LEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALETADAVDL--------------GD 199 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 L Y F E++ V + LKA + D S +F + Sbjct: 200 LVAFYREAKKRFDEDEAFQFTSREEVVKLQGGDPVSLKAWGLLCD--QSRREFQK----- 252 Query: 273 IRDIID-NLARQGYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMVGDDVDR-PLL- 325 I D +D L+ +G + P + ++ D + +F + G D + P++ Sbjct: 253 IYDRLDIRLSERGESFYNPFLPAVIDGLKDAELLVTDDGAECVFLEGVQGKDGNPLPVIV 312 Query: 326 -KSDGSYTYFAADLAYFKCKYER-----GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEK 377 KSDG + Y DLA + ++ G +IYV + + + + VA A Sbjct: 313 RKSDGGFNYATTDLAAIRYRFGAVPDGDGARRVIYVTDAGQANHFAGVFQVATRAGWIPD 372 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416 A++ + LV+ DG K+ R+GD + LR ++DE Sbjct: 373 GARLEHVPFGLVQ-GEDGK--KLKTRSGDTVRLRDLLDEAVERAEADLRSRLKAEERSES 429 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466 VG +V++ L + F F ++ + N Y+ YA R I R Sbjct: 430 EEFIHHVAATVGLAAVKYADLSQNRITNYQFSFDRML-ALQGNTAPYLLYAVVRIAGIAR 488 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 + D+ V + +F + E L+ L ++ VI P +L YL Sbjct: 489 KGGDL-----------EVSTAQLQFSEPQEWALVRELLKFDVVIAEVEEELLPNRLCSYL 537 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++L+ VF+ + + ++A + L RL L A + +GL ++G+ S M Sbjct: 538 FELSQVFNRFYDQ------VPVLKAESEALP-SRLALCRLTADTLKAGLGLLGIPSLERM 590 >gi|315506779|ref|YP_004085666.1| arginyl-tRNA synthetase [Micromonospora sp. L5] gi|315413398|gb|ADU11515.1| arginyl-tRNA synthetase [Micromonospora sp. L5] Length = 572 Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 138/602 (22%), Positives = 228/602 (37%), Gaps = 111/602 (18%) Query: 38 RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 R H ++AA+ L+R LG P IA + R + +V ++G GF+NL ++ Sbjct: 28 RRSQHADFQSDAALGLARRLGQPPREIAAEVRERAALADVCAAVEVSGPGFLNLTVAGHA 87 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 L ++S++ G ++ + V +++ N MHVGH R V+GD A + + Sbjct: 88 LGGLVSALAAD-PRLGVPVVAEPETVVVDYSGPNVAKEMHVGHLRSTVIGDAAARTLEWL 146 Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198 G+ V R ++ D G L L F++ +A +++D E Sbjct: 147 GHRVLRANHLGDWGTPFGMLIEHLLDLGEAGAAQELSMGDLDGFYKAARAKFDDDEAFRE 206 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 V G + L+ E +L + DL + + D Sbjct: 207 RSRQRVVALQGGDPATLRLWRLLVTQSEGYFLTVY--------------DLLDVTLTGDD 252 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 F E +H + ++ L R G + D +F VG Sbjct: 253 FRGESSYH----DQLAPTVEELDRLGLLRRS---------------DGADCVFPPGSVGR 293 Query: 319 DVDR-PLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAV 374 D + PL+ KSDG Y Y A DLA + + G ++YV+G + + + AVAA Sbjct: 294 DGEPLPLIVRKSDGGYGYPATDLAALRHRTGALGATRLLYVVGLPQRRHFEMVFAVAAQA 353 Query: 375 SEKKAQINVLLCELVR-LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR-KNS 432 A L DG ++ RAG + L ++ E R L R +N Sbjct: 354 GWLTAPARAEHVGFGSILGPDGRMLR--SRAGGSVKLAGLLTEA---VQRATALARERNP 408 Query: 433 ELLDFDFCKV---------------KEQSKE-------------NPVFYVQYAYARCRSI 464 EL + + +V ++ K+ N Y+QYAY+R RSI Sbjct: 409 ELGESEAAEVGRAVGVGAIKYADLSGDRHKDYVLDWERMLSLDGNTAPYLQYAYSRVRSI 468 Query: 465 FRQAKDIF-PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 FR+A PD + L + +E L + L + V+E E ++L Sbjct: 469 FRRAGAAARPDAEVSL-----------AEPAERALAMELVGFAAVVEEVAGGLEFHRLTA 517 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 YL+ LA F + P LR + RL L ++ GL+++G+ +P Sbjct: 518 YLHRLAVAFSAFYER---CPVLR----AEGPVRESRLVLCDLTGRVLRQGLDLLGIRTPE 570 Query: 584 EM 585 + Sbjct: 571 RL 572 >gi|296112948|ref|YP_003626886.1| arginyl-tRNA synthetase [Moraxella catarrhalis RH4] gi|295920642|gb|ADG60993.1| arginyl-tRNA synthetase [Moraxella catarrhalis RH4] Length = 575 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 136/601 (22%), Positives = 240/601 (39%), Gaps = 100/601 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ LG++P A+ ++ + ID + + IAG GFIN++ Sbjct: 27 LVRQSNKIQFGDYQANGIMGAAKKLGINPREFAQTVLDHLSIDNIAEKLEIAGPGFINIF 86 Query: 93 LSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 L ++ K + +S G+ +N V +++ S N MHVGH R ++GD+ Sbjct: 87 LKNEWISKHANQANISRTLGVNAAQN-----DTVVVDYSSPNVAKEMHVGHLRSTIIGDS 141 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND------SDLPEGYYPG 203 + + F G V R ++ D G Q L Y + + N+D SDL Y Sbjct: 142 VVRTLEFLGNTVIRANHVGDWGTQFGMLI-----AYLEKVQNDDVKDLDLSDLEAFYRAA 196 Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 + + A K + ++ L +Y + K++ D+ QH Sbjct: 197 KHAYDSDEAFAKKSRNYVVK------LQSGDEYCLTMWRKLV--DITMAQCQH------- 241 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFR---STMVG 317 + R + + RD D + +Y +LP K + D ++F + G Sbjct: 242 TYDRLNVTLTRD--DTMGES--LYNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAG 297 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 D + + K DG Y Y D+A +Y + + ++ +D + L A A + + Sbjct: 298 DPMGVIIQKKDGGYLYTTTDIAAAAYRYHTLHADRV-ILFTDAR---QTLHAQQAWLITR 353 Query: 378 KAQI--NVLLCEL----VRLYRDGMPIKMSKRAGDFITL--------------------- 410 KA + + E + L +DG P K R G + L Sbjct: 354 KAGFVPDEFVMEHFTFGMMLGKDGKPFKT--RTGGTVKLADLLDEAIERATTLIEQKNPD 411 Query: 411 ------RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 R VV+ V +V++ L + + FD+ + + N Y+QYAY R RSI Sbjct: 412 LSAEEKRAVVEAVAIGAVKYSDLSKNRNTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSI 470 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 F +A LD ++ E + E L V L ++ V+ P+ L Y Sbjct: 471 FARAG-----LDMADIGGEIVIHEDK----ERALAVKLLQFEEVLLLVAKDGMPHLLCQY 521 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 L++LA +F + P L +++ K RL+L A + GL ++G+++ + Sbjct: 522 LFELAGIFSSFY---EACPIL----SSDDKTKTSRLRLAALTAKTLKQGLQLLGIKTVEK 574 Query: 585 M 585 M Sbjct: 575 M 575 >gi|291519091|emb|CBK74312.1| arginyl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4] Length = 586 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 128/597 (21%), Positives = 234/597 (39%), Gaps = 90/597 (15%) Query: 36 RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95 RP C N A+ ++ P+ IA + ++ + GFIN+ LS Sbjct: 33 RPDLC---QFQCNGALAAAKEYKKAPIAIAGEVAEKLASNSMFSKCEACPPGFINMNLSD 89 Query: 96 SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155 ++ +S++ +G + + KV I++ N P+HVGH R A++G+++ Sbjct: 90 QFIVDFVSTMADDKERFGVDKVSSPKKVMIDYGGPNVAKPLHVGHLRSAIIGESIKRTAR 149 Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG-----------V 204 F G EV + ++ D G Q+ + + R +Y ++S +G YP + Sbjct: 150 FMGDEVIGDVHLGDWGLQMGLIITELKLRQPDLVYFDES--YDGEYPTEPPFTITELEEI 207 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYS--VQAMMKIIRDDLK----ALNIQHDI 258 Y GK D E + K Y + ++ + +DLK L++ D+ Sbjct: 208 YPCASGKSKEDAAYKEAAMTATYELQHGRKGYQALLSHILNVSVNDLKRNYEKLDVDFDL 267 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVY--EGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 + E D P D++ + G+ Y EG L K + D K++ M+ Sbjct: 268 WKGESDAQPYIP----DMVQKMKDDGFAYISEGALV-----VDVKEETDTKEV--PPCMI 316 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375 LKSDG+ Y DLA + + D++IYV+ Y ++ A Sbjct: 317 --------LKSDGASLYNTTDLATMVWRMKDYNPDSIIYVVDKRQELYFTQVFRCAKKTG 368 Query: 376 EKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDE------------------ 416 A N+ + +DG P K R G + L +++ E Sbjct: 369 IVPADKNLYFVGFGTMNGKDGKPFKT--RQGGVMRLEYLLQEVEEKMLEKIRENGTMDEE 426 Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG +V++ L + S+ FD + ++ N Y+ Y RC+SI +A Sbjct: 427 EAEKTAQIVGLSAVKYGDLSNQASKDYIFDIDRFT-SAEGNTGPYILYTIVRCKSILTKA 485 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 F ++P SE SE L + L ++ + +A P+K+ Y+YDL Sbjct: 486 -------GVSSFNGAILPAHSE---SERGLQLELTKFMAALTSAYEEMAPHKICAYIYDL 535 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A+ F+ + + + + + L+L+ ++ ++++G +P M Sbjct: 536 ANAFNRFYHD------TKILAEEDEAVKASYLKLLWLTRGVLEKAIDLLGFNAPERM 586 >gi|167626497|ref|YP_001676997.1| arginyl-tRNA synthetase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596498|gb|ABZ86496.1| Arginine--tRNA ligase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 642 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 129/598 (21%), Positives = 247/598 (41%), Gaps = 107/598 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH N AM L++ PL IA+ I+ +I + + +A GFIN+ LS +L Sbjct: 97 GHFQCNGAMPLAKFAKKAPLMIAQEIIEQIDDEDIFSKLEVAKPGFINISLSNKFLAATT 156 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S ++G K KV ++F N PMHVGH R A++GD L L F V Sbjct: 157 DKFLNSS-KFGVQGNTKPKKVVLDFGGPNVAKPMHVGHIRSALLGDALQRLHRFYNDNVI 215 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH---VGKELADKY-- 217 + ++ D G Q+ L + +Y +++ Y G Y K +ELA+ Y Sbjct: 216 SDVHLGDWGTQMGMLIEEIKLESPDLVYFDEN------YNGEYPKESPVTVQELAEIYPR 269 Query: 218 -----SSELLNFPE-----------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 S+++ + K + + V+ ++ I+ D +L++ D+++ Sbjct: 270 ASKRCKSDIIEMDKARQATFELQQGRKGYVALWQHFVRISIEAIKKDFDSLDVHFDLWLG 329 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E D ++ + ++I ++YE + D +++ + Sbjct: 330 ESDANKF----VDEMIAYFKTNNFIYE-------DEGAWVIDTNKEGI------------ 366 Query: 322 RPL--LKSDGSYTYFAADLA-YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378 PL +K DG Y DLA ++ + D +IYV+ S + K++ +VA K+ Sbjct: 367 PPLIVIKKDGGVMYGTTDLATLWQRAKDLNPDEIIYVVDKRQSLHFKQVFSVA-----KR 421 Query: 379 AQINVLLCELVRLY------RDGMPIKMSKRAGDFITL--------------------RH 412 ++ C+L + +DG P K R G + L + Sbjct: 422 TKVVSEECKLKHVAFGTVNGKDGRPFKT--REGGVMHLSDLISQAKNYAHKRMPDENDEN 479 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDI 471 +++++ +++F L + FD K + + K P Y+ Y R ++I R+ + Sbjct: 480 IINQIAMATIKFGDLVNNYANDYIFDLEKFAQYEGKTGP--YLLYTTVRAKAILRK---V 534 Query: 472 FPDLDFDLFPRNVIPQESEFDTS----ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 F D ++D+ N + +E + E +L + L ++P + A +P+ + Y Y Sbjct: 535 FGD-NYDI---NSLAKEYRITKADNEHEEKLQLQLIQFPIAVSRAYENSQPHHICEYAYS 590 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA+ F+ + + + ++ +L R+ L A + +++G+ P M Sbjct: 591 LANSFNRFYVN------CPIMNLDDEQLKKSRIALCMATVKAMTIATDLLGISIPERM 642 >gi|291536403|emb|CBL09515.1| arginyl-tRNA synthetase [Roseburia intestinalis M50/1] Length = 595 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 124/600 (20%), Positives = 240/600 (40%), Gaps = 87/600 (14%) Query: 36 RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95 RP C + N AM ++ P IA+ + A++ GF+NL L Sbjct: 33 RPDLCEY---QCNGAMAAAKEYKKAPFMIADEVAAKLAEASMFSMTESVKPGFLNLKLDE 89 Query: 96 SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155 ++L ++ + +G + I++ N P+HVGH R A++G+++ + Sbjct: 90 TFLASYVADMQADEGRFGCEKAENPKTIMIDYGGPNVAKPLHVGHLRSAIIGESIKRIGK 149 Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALY---NNDSDLP----------EGYYP 202 F G++V + ++ D G Q+ + + R + +Y N + + P E YP Sbjct: 150 FVGHKVIGDVHLGDWGLQMGLIITELKLRQPELVYFDENYEGEYPKEAPFTISELEEIYP 209 Query: 203 GVYLK----HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 K KE A + + EL + K + + + + ++ + + LN+ ++ Sbjct: 210 TASKKSKEDEAYKEAAMQATYELQH--GRKGYQALLSHILNVSVTDLKKNYENLNVSFEL 267 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + E D P+ ++ + D+ YV +G L K D D K++ M+ Sbjct: 268 WKGESDAQPYIPAMVQKMKDD--GFAYVSDGALV-----VDVKEDTDTKEI--PPCMI-- 316 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 LKSDG+ Y DLA + E D +IYV+ + ++ A Sbjct: 317 ------LKSDGASLYNTTDLATIVWREEDYDPDEIIYVVDKRQELHFVQVFRCARKTGLV 370 Query: 378 KAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + + + +DG P K R G + L ++V E+ ++ ++ + +K E L Sbjct: 371 KPETELKFLGFGTMNGKDGKPFKT--RDGGVMRLEYLVSEIDNEMLKKITENQKAKENLG 428 Query: 437 FDFCKVKEQSKE-------------------------------NPVFYVQYAYARCRSIF 465 + KE +K N Y+ Y R +SI Sbjct: 429 ISEEEAKETAKTVALAAIKYGDLSNQASKDYIFDIDRFTSFEGNTGPYILYTIVRIKSIL 488 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 + D+ + D + + SE SE L++ L+++ VIE A P+K+ Y+ Sbjct: 489 HKYHDLGKNADNSV----ITAAHSE---SEKNLMLELSKFNAVIEGAFTDTAPHKICSYI 541 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 YDLA+ F+ + + + + + ++L+ S++ + ++++G +P M Sbjct: 542 YDLANAFNSFYH------ETKIMSEEDETVQKSYIRLLELTKSVLETSIDLLGFSAPERM 595 >gi|49477538|ref|YP_036321.1| arginyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|81396232|sp|Q6HJF5|SYR1_BACHK RecName: Full=Arginyl-tRNA synthetase 1; AltName: Full=Arginine--tRNA ligase 1; Short=ArgRS 1 gi|49329094|gb|AAT59740.1| arginine--tRNA ligase (arginyl-tRNA synthetase) [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 562 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 139/621 (22%), Positives = 252/621 (40%), Gaps = 101/621 (16%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ L I +K+ILD +IE P+ G + L++ P IA Sbjct: 2 DYKMHFAESLSNIFTNELTQKQILD--LIESPKQDEFGD-AAFPCFSLAKQYKKAPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V G ++N++ + + +L +I+ EYG N G V Sbjct: 59 KEVAQKLS-DPFFTKVEAVGP-YVNVFFNRETVSDTVLKTILAEKEEYGHNHFGYEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS---- 180 I++ S N P +GH R ++G++L + GYEV YI D G Q L + Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKW 176 Query: 181 ----------------VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN- 223 ++ ++ + + +++ EG + K + E D+ + EL N Sbjct: 177 GNEAVVKEDPIRELFKLYVQFHEEVTDDEELEEEGR---AWFKKL--EEGDEEAVELWNW 231 Query: 224 FPEEKWLPIVKDYSV----------QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273 F E + Y + +A + +D + +HD+ + Sbjct: 232 FRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEESEG--------- 282 Query: 274 RDIIDNLARQGYVYEGILPP----PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 ++ NL +G +PP T D L+R G D ++ + Sbjct: 283 -ALVVNLEEEG------MPPCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQ 335 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHS--GYVKRLEAVAAAVSEKKAQINVLLCE 387 S + +F + G+ +V G +H G++ + +S +K +I +LL E Sbjct: 336 SLHF----NQFFTVLKKLGY---TWVDGMEHVPFGFILK---DGKKMSTRKGRI-ILLEE 384 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKE 444 ++ + + ++ + V +VG+ +V F L KN + + +F +K Sbjct: 385 VLEEAIELAKQNIEEKNPNLKQKDEVAKQVGAGAVIFHDL--KNERMHNIEFSLENMLKF 442 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 + + P YVQY +AR SI R+ F F L D ++ L + Sbjct: 443 EGETGP--YVQYTHARACSILRKESVEFETCTFTL-----------KDDHSWNIVKLLNK 489 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 +P+VIE A EP ++ Y+ D+A F+ ++ + +R + N K + RL LV+ Sbjct: 490 FPKVIEAACNKNEPSVISKYVLDVAQSFNKYYGN------VRILDENAEKDS--RLALVY 541 Query: 565 AVASIINSGLNIIGVESPNEM 585 AV ++ GL ++GVE+P EM Sbjct: 542 AVTVVLKEGLRLLGVEAPEEM 562 >gi|331268963|ref|YP_004395455.1| arginyl-tRNA synthetase [Clostridium botulinum BKT015925] gi|329125513|gb|AEB75458.1| arginyl-tRNA synthetase [Clostridium botulinum BKT015925] Length = 563 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 145/590 (24%), Positives = 248/590 (42%), Gaps = 127/590 (21%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIE 111 L++ P IAE + ++I + + V G ++N ++ S++ L+ ++ G Sbjct: 44 LAKTFRKAPNMIAEELSSKIN-NEGFEKVVALGP-YLNFFMDKGSFVADTLNKVLSEGER 101 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG + GKG V I++ S N P HVGH +G++L ++ F GY ++ D G Sbjct: 102 YGSSEEGKGKNVTIDYSSPNIAKPFHVGHLFSTSIGNSLYRMLNFEGYNSIGINHLGDWG 161 Query: 172 AQINTLALSVF--WRYQQALYNNDSDLPEGYYPGVYLK-HVGKE----LADK---YSSEL 221 Q L +S + W Q AL + P +Y+K H E L D+ Y +L Sbjct: 162 TQFGKL-ISAYKRWVDQDALEKD----PIKELLRIYVKFHDEAEKDPSLEDEGRMYFKKL 216 Query: 222 LNFPEEK---WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 + +E+ W K+ S++ K+ + L ++ D + E ++ S I++I Sbjct: 217 EDGEKEEVELW-ERFKNLSLKEFKKV----YELLGVKFDSYAGESFYNDKMDSVIKEI-- 269 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRP---LLKSDGSY 331 D+K +L S ++ DD + P ++K DG+ Sbjct: 270 --------------------------DKKGILVESNGAKVVMMDDENMPPCIIVKGDGAT 303 Query: 332 TYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCE 387 Y DLA Y K Y+ F IYV+GSD S + K++ + A + Sbjct: 304 IYATRDLAAAFYRKKNYD--FYKSIYVVGSDQSLHFKQVFNTIEKMGYDWANDCKHVAFG 361 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD--------- 438 LVR K+S R G I L +++E S ++ ++ KN +L + + Sbjct: 362 LVRF----ADKKLSTRKGQVIFLEDLLNESVSKTLE--VINEKNPQLKNKEEVAKKVGIG 415 Query: 439 ---FCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 F +K + +++ VF YVQY YAR +SI R+A ++ +++F Sbjct: 416 AVIFTYLKNKREKDIVFNWNEMLNFEGETGPYVQYTYARGKSILRRAGEVQGEVNF---- 471 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + + EF+ L+ L + A EP L Y+ D+A F+ Sbjct: 472 -AALNSQEEFN-----LVKVLGNLKEEVLGAIDKLEPSILTRYIIDVAKAFN-------- 517 Query: 542 NPRLRFVQANNRKLTM------MRLQLVHAVASIINSGLNIIGVESPNEM 585 +F A+N T RL+LV A +I +GL+++G+E EM Sbjct: 518 ----KFYNAHNIMATEDIAVKNARLKLVEATCQVIKNGLDLLGIEVVEEM 563 >gi|326577009|gb|EGE26904.1| arginyl-tRNA synthetase [Moraxella catarrhalis 101P30B1] gi|326577465|gb|EGE27349.1| arginyl-tRNA synthetase [Moraxella catarrhalis O35E] Length = 575 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 136/601 (22%), Positives = 240/601 (39%), Gaps = 100/601 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ LG++P A+ ++ + ID + + IAG GFIN++ Sbjct: 27 LVRQSNKIQFGDYQANGIMGAAKKLGINPREFAQTVLDHLSIDDIAEKLEIAGPGFINIF 86 Query: 93 LSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 L ++ K + +S G+ +N V +++ S N MHVGH R ++GD+ Sbjct: 87 LKNEWISKHANQANISRTLGVNAAQN-----DTVVVDYSSPNVAKEMHVGHLRSTIIGDS 141 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND------SDLPEGYYPG 203 + + F G V R ++ D G Q L Y + + N+D SDL Y Sbjct: 142 VVRTLEFLGNTVIRANHVGDWGTQFGMLI-----AYLEKVQNDDVKDLDLSDLEAFYRAA 196 Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 + + A K + ++ L +Y + K++ D+ QH Sbjct: 197 KHAYDSDEAFAKKSRNYVVK------LQSGDEYCLTMWRKLV--DITMAQCQH------- 241 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFR---STMVG 317 + R + + RD D + +Y +LP K + D ++F + G Sbjct: 242 TYDRLNVTLTRD--DTMGES--LYNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAG 297 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 D + + K DG Y Y D+A +Y + + ++ +D + L A A + + Sbjct: 298 DPMGVIIQKKDGGYLYTTTDIAAAAYRYHTLHADRV-ILFTDAR---QTLHAQQAWLITR 353 Query: 378 KAQI--NVLLCEL----VRLYRDGMPIKMSKRAGDFITL--------------------- 410 KA + + E + L +DG P K R G + L Sbjct: 354 KAGFVPDEFVMEHFTFGMMLGKDGKPFKT--RTGGTVKLADLLDEAIERATTLIEQKNPD 411 Query: 411 ------RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 R VV+ V +V++ L + + FD+ + + N Y+QYAY R RSI Sbjct: 412 LSAEEKRAVVEAVAIGAVKYSDLSKNRNTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSI 470 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 F +A LD ++ E + E L V L ++ V+ P+ L Y Sbjct: 471 FVRAG-----LDMADIGGEIVIHEDK----ERALAVKLLQFEEVLLLVAKDGMPHLLCQY 521 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 L++LA +F + P L +++ K RL+L A + GL ++G+++ + Sbjct: 522 LFELAGIFSSFY---EACPIL----SSDDKTKTSRLRLAALTAKTLKQGLQLLGIKTVEK 574 Query: 585 M 585 M Sbjct: 575 M 575 >gi|293392120|ref|ZP_06636454.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952654|gb|EFE02773.1| arginyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 577 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 130/580 (22%), Positives = 229/580 (39%), Gaps = 76/580 (13%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LG++P A+L++++ ++ + IAG GFIN++L +L + + Sbjct: 37 GDYQANGIMPAAKKLGINPREFAQLVLSKAELQDIAEKTEIAGPGFINIFLKDGWLAENI 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + V + G + K T V +++ S N MHVGH R ++GD + + F G V Sbjct: 97 GN-AVKDSKLGIHHQDKQTVV-VDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNHVI 154 Query: 163 REYYINDAGAQINTLA------------------LSVFWRYQQALYNNDSDLPEGYYPGV 204 R ++ D G Q L L F+R + Y+ D E V Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHASEMELSDLEAFYRAAKKHYDEDPVFAEKARNYV 214 Query: 205 YLKHVGKELADKYSSELL---------NFPEEKWLPIVKDYSVQA----MMKIIRDDLK- 250 G E +L+ N+ KD ++ M+ I +DLK Sbjct: 215 VKLQSGDEYCRTMWQKLVKITMQQNQHNYDRLNVTLAEKDVMGESLYNPMLPGIVEDLKK 274 Query: 251 -ALNIQHD--IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307 L ++ D + D+F D P+ I+ G++Y +K + + Sbjct: 275 QGLAVEDDGAWVVYLDEFKNKDGGPMGVIVQK-KDGGFLYT-TTDIAAAKYRYETLKASR 332 Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367 L+F T + + L Y ++ + N ++G D + R Sbjct: 333 ALVFSDTRQSQHMQQAWL--------ITRKAGYVPDSFQLEYKNFGMMLGKDGKPFKTR- 383 Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 S ++ LL E + R G+ I A V++ VG SV++ L Sbjct: 384 -------SGDTVKLADLLDEAIE--RAGVLISQKSTALSEQEKADVIEAVGIGSVKYADL 434 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487 + FD+ + + N Y+QYAY R RSIF +++ + P V Q Sbjct: 435 SKNRITDYVFDWDNMLS-FEGNTAPYMQYAYTRIRSIFNRSQ---------INPAEV-EQ 483 Query: 488 ESEFDTSELQ--LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 S T+E + L + L ++ I+ P+ L YLY+LA VF + H Sbjct: 484 ASLTLTNEKERALAIKLLQFEEAIQLVAKDGTPHILCAYLYELAGVFSSFYEH------C 537 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++++ + RL+L + GL+++G+++ M Sbjct: 538 PILNNEDQQVKLSRLKLALLTERTLKQGLDLLGIKTVERM 577 >gi|255654755|ref|ZP_05400164.1| arginyl-tRNA synthetase [Clostridium difficile QCD-23m63] gi|296449501|ref|ZP_06891278.1| arginine--tRNA ligase [Clostridium difficile NAP08] gi|296878176|ref|ZP_06902191.1| arginine--tRNA ligase [Clostridium difficile NAP07] gi|296261565|gb|EFH08383.1| arginine--tRNA ligase [Clostridium difficile NAP08] gi|296430929|gb|EFH16761.1| arginine--tRNA ligase [Clostridium difficile NAP07] Length = 566 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 147/622 (23%), Positives = 260/622 (41%), Gaps = 100/622 (16%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 DF + N LKE KI+ K +IE P + G + L++ P IA Sbjct: 3 DFKVAISNCLKE---KIEDLSKEEIEALIEVPPNKDMGDYAF-PCFKLAKVFRKAPNMIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGKGTKVN 124 + I+ ++ V G G++N +++ S L + + V+ E YG + GK V Sbjct: 59 SELAESIEPSGEITKVIQLG-GYVNFFVNKSQLAETVIKKVLDEKENYGHSDFGKDKTVI 117 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +E+ S N P H+GH R V+G+ L + GY+ R ++ D G Q L ++ F + Sbjct: 118 VEYSSPNIAKPFHIGHIRTTVIGNALYKIYDSQGYKTIRINHLGDYGTQFGKLIVA-FKK 176 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE-----EKWLPIVK--DYS 237 + + + +PE LK L ++ E PE W ++ D Sbjct: 177 WGEKEVVESNPIPE------LLK-----LYVRFHDEAEQHPEMEDEARAWFAKLENGDEE 225 Query: 238 VQAMMKIIRDD-LKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEGILPP 293 + + + RD+ LK N + + E D G+ + +I+ L + + E Sbjct: 226 AKELWQWFRDESLKEFNRVYKLLDIEFDSLAGESFYSDKMNRVIELLEEKHLLKE----- 280 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERG 348 SK + D++ ++ P L K+DGS Y DLA Y K Y+ Sbjct: 281 --SKGARIVDLEEYKM------------PPALITKNDGSTLYMTRDLAAAIYRKETYD-- 324 Query: 349 FDNMIYVMGSDHS----GYVKRLEAVA-------------------AAVSEKKAQINVLL 385 FD IYV+GS + + K +E + +S +K ++ L Sbjct: 325 FDKCIYVVGSQQNLHFQQWFKVIELMGYDWAKDLIHVGFGMVALEEGTMSTRKGRVVFLE 384 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 L + I ++K + + + +VG +V F L NS + D+ F + Sbjct: 385 DALNQAIDKTKEIILAKNP-NAKNVDEISKQVGVGAVVFQEL--SNSRIKDYTFSWERTL 441 Query: 446 SKENPVF-YVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503 S + YVQY +ARC ++ R+A+ ++ D+D+ L ++ D++E+ ++ Sbjct: 442 SFDGETGPYVQYTHARCCAVLRKAEVEVTSDIDYSLL--------ADEDSAEVLRVIE-- 491 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 + + I A EP+ + ++ DLA F+ + +NP L N ++ RL LV Sbjct: 492 SFNKNILLALKKNEPHIVTRFMLDLAQAFNKFY---HDNPIL----VENLEIRKARLALV 544 Query: 564 HAVASIINSGLNIIGVESPNEM 585 A + + L ++G+ +P M Sbjct: 545 LATKQTLENSLRLLGMHAPERM 566 >gi|126698290|ref|YP_001087187.1| arginyl-tRNA synthetase [Clostridium difficile 630] gi|254974326|ref|ZP_05270798.1| arginyl-tRNA synthetase [Clostridium difficile QCD-66c26] gi|255091722|ref|ZP_05321200.1| arginyl-tRNA synthetase [Clostridium difficile CIP 107932] gi|255099825|ref|ZP_05328802.1| arginyl-tRNA synthetase [Clostridium difficile QCD-63q42] gi|255305710|ref|ZP_05349882.1| arginyl-tRNA synthetase [Clostridium difficile ATCC 43255] gi|255313450|ref|ZP_05355033.1| arginyl-tRNA synthetase [Clostridium difficile QCD-76w55] gi|255516138|ref|ZP_05383814.1| arginyl-tRNA synthetase [Clostridium difficile QCD-97b34] gi|255649234|ref|ZP_05396136.1| arginyl-tRNA synthetase [Clostridium difficile QCD-37x79] gi|260682408|ref|YP_003213693.1| arginyl-tRNA synthetase [Clostridium difficile CD196] gi|260686007|ref|YP_003217140.1| arginyl-tRNA synthetase [Clostridium difficile R20291] gi|306519336|ref|ZP_07405683.1| arginyl-tRNA synthetase [Clostridium difficile QCD-32g58] gi|123174390|sp|Q189Q7|SYR_CLOD6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|115249727|emb|CAJ67544.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) (ArgRS) [Clostridium difficile] gi|260208571|emb|CBA61255.1| arginyl-tRNA synthetase [Clostridium difficile CD196] gi|260212023|emb|CBE02575.1| arginyl-tRNA synthetase [Clostridium difficile R20291] Length = 566 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 147/622 (23%), Positives = 260/622 (41%), Gaps = 100/622 (16%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 DF + N LKE KI+ K +IE P + G + L++ P IA Sbjct: 3 DFKVAISNCLKE---KIEDLSKEEIEALIEVPPNKDMGDYAF-PCFKLAKVFRKAPNMIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGKGTKVN 124 + I+ ++ V G G++N +++ S L + + V+ E YG + GK V Sbjct: 59 SELAESIEPSGEITKVIQLG-GYVNFFVNKSQLAETVIKKVLDEKENYGHSDFGKDKTVI 117 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +E+ S N P H+GH R V+G+ L + GY+ R ++ D G Q L ++ F + Sbjct: 118 VEYSSPNIAKPFHIGHIRTTVIGNALYKIYDSQGYKTIRINHLGDYGTQFGKLIVA-FKK 176 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE-----EKWLPIVK--DYS 237 + + + +PE LK L ++ E PE W ++ D Sbjct: 177 WGEKEVVESNPIPE------LLK-----LYVRFHDEAEQHPEMEDEARAWFNKLENGDEE 225 Query: 238 VQAMMKIIRDD-LKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEGILPP 293 Q + + R++ LK N + + E D G+ + +I+ L + + E Sbjct: 226 AQELWQWFRNESLKEFNRVYKLLDIEFDSLAGESFYSDKMNRVIELLEEKNLLKE----- 280 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERG 348 SK + D++ ++ P L K+DGS Y DLA Y K Y+ Sbjct: 281 --SKGARIVDLEEYKM------------PPALITKNDGSTLYMTRDLAAAIYRKETYD-- 324 Query: 349 FDNMIYVMGSDHS----GYVKRLEAVA-------------------AAVSEKKAQINVLL 385 FD IYV+GS + + K +E + +S +K ++ L Sbjct: 325 FDKCIYVVGSQQNLHFQQWFKVIELMGYDWAKDLIHVGFGMVALEEGTMSTRKGRVVFLE 384 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 L + I ++K + + + +VG +V F L NS + D+ F + Sbjct: 385 DALNQAIDKTKEIILAKNP-NAKNVDEISKQVGVGAVVFQEL--SNSRIKDYTFSWERTL 441 Query: 446 SKENPVF-YVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503 S + YVQY +ARC ++ R+A+ ++ D+D+ L ++ D++E+ ++ Sbjct: 442 SFDGETGPYVQYTHARCCAVLRKAEVEVTSDIDYSLL--------ADEDSAEVLRVIE-- 491 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 + + I A EP+ + ++ DLA F+ + +NP L N ++ RL LV Sbjct: 492 SFNKNILLALKKNEPHIVTRFMLDLAQAFNKFY---HDNPIL----VENLEIRKARLALV 544 Query: 564 HAVASIINSGLNIIGVESPNEM 585 A + + L ++G+ +P M Sbjct: 545 LATKQTLENSLKLLGMHAPERM 566 >gi|196033964|ref|ZP_03101375.1| arginyl-tRNA synthetase [Bacillus cereus W] gi|228945801|ref|ZP_04108147.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|195993644|gb|EDX57601.1| arginyl-tRNA synthetase [Bacillus cereus W] gi|228813866|gb|EEM60141.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 562 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 141/621 (22%), Positives = 255/621 (41%), Gaps = 101/621 (16%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ L I +K+ILD +IE P+ G + L++ P IA Sbjct: 2 DYKMHFAESLSNIFTNELTQKQILD--LIESPKQDEFGD-AAFPCFSLAKQYKKAPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V G ++N+Y + + +L +I+ EYG+N G V Sbjct: 59 KEVAQKLS-DPFFTKVEAVGP-YVNVYFNRDTVSDAVLKTILAEKEEYGQNYFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA------ 178 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKW 176 Query: 179 --------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN- 223 ++ ++ + + +++ EG + K + E D+ + EL N Sbjct: 177 GNEAVVKEDPIRELFKLYVQFHEEVKDDEELEEEGR---AWFKKL--EEGDEEAVELWNW 231 Query: 224 FPEEKWLPIVKDYSV----------QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273 F E + Y + +A + +D + +HD+ + Sbjct: 232 FRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEESEG--------- 282 Query: 274 RDIIDNLARQGYVYEGILPP----PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 ++ NL +G +PP T D L+R G D ++ + Sbjct: 283 -ALVVNLEEEG------MPPCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQ 335 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHS--GYVKRLEAVAAAVSEKKAQINVLLCE 387 S + +F + G+ +V G +H G++ + +S +K ++ +LL E Sbjct: 336 SLHF----NQFFTVLKKLGY---TWVDGMEHVPFGFILK---DGKKMSTRKGRV-ILLEE 384 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKE 444 ++ D + ++ + V +VG +V F L KN + + +F +K Sbjct: 385 VLEEAIDLAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKF 442 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 + + P YVQY +AR SI R+ F F L + ++ S ++L L + Sbjct: 443 EGETGP--YVQYTHARACSILRKESVEFETCTFAL--------KDDYSWSVVKL---LNK 489 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 +P+VIE A EP ++ Y+ D+A F+ ++ + +R + N K + RL LV+ Sbjct: 490 FPQVIEIAFNKNEPSVISKYVLDVAQSFNKYYGN------VRILDENAEKDS--RLALVY 541 Query: 565 AVASIINSGLNIIGVESPNEM 585 AV ++ GL ++GVE+P EM Sbjct: 542 AVTVVLKEGLRLLGVEAPEEM 562 >gi|170719563|ref|YP_001747251.1| arginyl-tRNA synthetase [Pseudomonas putida W619] gi|229558809|sp|B1J2I3|SYR_PSEPW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|169757566|gb|ACA70882.1| arginyl-tRNA synthetase [Pseudomonas putida W619] Length = 578 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 48/146 (32%), Positives = 77/146 (52%), Gaps = 1/146 (0%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE ++A + D+ IAG GF+N Sbjct: 30 IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPASADISKAEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + L L + + G G KV I+ + N MHVGH R ++GD++A Sbjct: 90 FQNTDALANRLDAALADA-HLGARKAGPAQKVVIDMSAPNLAKEMHVGHLRSTIIGDSVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177 ++ F G +V R+ ++ D G Q L Sbjct: 149 RVLEFLGDQVIRQNHVGDWGTQFGML 174 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 19/155 (12%) Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 LRH+ + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 419 LRHIGEVVGIGAVKYADLSKHRTSDYSFNF-ELMLNFEGNTAPYLLYAYTRVAGVFRKLG 477 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 FD +++ Q + E L LA++ ++ N P+ L YLYDLA Sbjct: 478 K-----GFDEVEGHIVLQAAH----EQDLAARLAQFGEILNNVADKGTPHVLCTYLYDLA 528 Query: 530 SVFHGHWSH----GRENP-----RLRFVQANNRKL 555 +F + + E P RLR R L Sbjct: 529 GLFSSFYENCPILAAETPEQQQSRLRLAALTGRTL 563 >gi|332981191|ref|YP_004462632.1| arginyl-tRNA synthetase [Mahella australiensis 50-1 BON] gi|332698869|gb|AEE95810.1| arginyl-tRNA synthetase [Mahella australiensis 50-1 BON] Length = 565 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 130/566 (22%), Positives = 232/566 (40%), Gaps = 78/566 (13%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIE 111 L++ + +P IA+ I IK ++ + G ++N + + + + + +L I+ G Sbjct: 45 LAKTMRKNPQLIAQEIADHIKKPNFIERIETKG-AYVNFFFNRAVFAQTVLEDILNKGER 103 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG + G G+ + I+F + N P H+GH R V+G++L + F GY+ ++ D G Sbjct: 104 YGSSDKGNGSVICIDFSAPNIAKPFHIGHLRSTVIGNSLYKIYEFLGYKCIGINHLGDWG 163 Query: 172 AQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230 Q L + W + L P +Y+K + A+K S L W Sbjct: 164 TQFGKLITAYKHWGIKDDLEKE----PIRALLDIYVKF--HDEAEKDPS--LEDEARMWF 215 Query: 231 PIVKDYSVQAM--MKIIRD-DLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQG 284 ++D +A+ + +D L+ N +D+ + D++ G+ + +++ L +G Sbjct: 216 KRMEDGDEEALSLWRWFKDLSLREFNKIYDMLGVKFDYYTGESFYNDKMDRVVELLQEKG 275 Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL-AYFKC 343 + E + +D Q M+ K+DG+ Y D+ A Sbjct: 276 LLTE---------SQGALVVDLSQYDMPPCMIK--------KTDGTTLYATRDITAAIYR 318 Query: 344 KYERGFDNMIYVMGSDHSGYVKRLEAV-----------------------AAAVSEKKAQ 380 K FD +YV+ + ++L V +S +K + Sbjct: 319 KETFDFDKCLYVVAYQQDLHFRQLFKVIELMGFDWYDKLFHVPFGMVSMEEGTLSTRKGR 378 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + L L + + I K G V +VG +V F L + + F + Sbjct: 379 VVFLEDVLQKAVDRTLDIIKEKNPG-LENKEDVAKQVGIGAVVFHDLINNRIKDIVFSWD 437 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 +V E YVQYA+AR SI +A + I ++ DL + L+LI Sbjct: 438 QVLNFDGETGP-YVQYAHARAMSILAKATQTITGEMGGDLLTED----------ETLELI 486 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 LA +P IE A A EP +A + D+A F+ + + V + +L R Sbjct: 487 DLLARFPEAIEAACQANEPSIVARHTIDIAQAFNKFYKN-------HMVIVEDDELQRAR 539 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L LV+A A +I GL ++G+++P +M Sbjct: 540 LTLVYATAQVIRIGLGLLGIQAPAKM 565 >gi|255348827|ref|ZP_05380834.1| arginyl-tRNA synthetase [Chlamydia trachomatis 70] gi|255503367|ref|ZP_05381757.1| arginyl-tRNA synthetase [Chlamydia trachomatis 70s] gi|255507045|ref|ZP_05382684.1| arginyl-tRNA synthetase [Chlamydia trachomatis D(s)2923] gi|289525499|emb|CBJ14976.1| arginyl-tRNA synthetase [Chlamydia trachomatis Sweden2] gi|296435055|gb|ADH17233.1| arginyl-tRNA synthetase [Chlamydia trachomatis E/150] gi|296438775|gb|ADH20928.1| arginyl-tRNA synthetase [Chlamydia trachomatis E/11023] Length = 563 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 141/585 (24%), Positives = 225/585 (38%), Gaps = 102/585 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH N AM L+R L P IAE IVA I P S+ IAG GFIN S +L L Sbjct: 39 GHYQCNDAMKLARVLRKSPRAIAESIVAHIPPAP-FSSIEIAGAGFINFTFSKEFLASQL 97 Query: 103 SSI---VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 + + +G KV I+F S N MHVGH R ++GD LA +F G+ Sbjct: 98 QTFSKELANGFR-----AASPQKVIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGH 152 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 +V R +I D G L + Q+A+ H ++L Y Sbjct: 153 DVLRLNHIGDWGTAFGMLITYLQETSQEAI------------------HQLEDLTALYKK 194 Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDIID 278 F E+ ++V A+ D +AL + I +SE F I I+D Sbjct: 195 AHARFAEDSEFKKRSQHNVVALQS---GDAQALALWKQICSVSEKSFQ-----TIYSILD 246 Query: 279 -NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS----TMVGDDVDRPLL--KSDGSY 331 L +G E P ++ D++ K L+ S + + PL+ KSDG Y Sbjct: 247 VELHTRG---ESFYNPFLAEVV--ADLESKNLVTLSDGAKCVFHEAFSIPLMIQKSDGGY 301 Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 Y D+A + + ++ D ++ V S S + + LEA A ++ + Sbjct: 302 NYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLLEATCLAAGYLPSK-GIFSHVGFG 360 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVR 423 L D K R+G+ I LR ++D +G ++++ Sbjct: 361 LVLDTQGRKFKTRSGENIKLRELLDTAVEKAKESLKAHRPDISEEDLAYQGPILGINAIK 420 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + L F F K+ + + N + YAY R + I R+ Sbjct: 421 YADLSSHRINDYVFSFEKML-RFEGNTAMSLLYAYVRIQGIKRR------------MGLE 467 Query: 484 VIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 +PQE + +E L + L +P +++ P+ L YLY L + F Sbjct: 468 SLPQEGPLAIHEPAEEALALTLLRFPEILDLTLRELCPHFLTDYLYALTNKF-------- 519 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N R RL L +++G++++G+++ N + Sbjct: 520 -NTFFRDCHIEGSDSQQERLYLCGLTERTLSTGMHLLGLKTLNHL 563 >gi|326567939|gb|EGE18036.1| arginyl-tRNA synthetase [Moraxella catarrhalis BC1] Length = 575 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 135/601 (22%), Positives = 240/601 (39%), Gaps = 100/601 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ LG++P A+ ++ + ID + + IAG GFIN++ Sbjct: 27 LVRQSNKIQFGDYQANGIMGAAKKLGMNPREFAQTVLDHLSIDDIAEKLEIAGPGFINIF 86 Query: 93 LSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 L ++ + + +S G+ +N V +++ S N MHVGH R ++GD+ Sbjct: 87 LKNEWISRHANQANISRTLGVNTAQN-----DTVVVDYSSPNVAKEMHVGHLRSTIIGDS 141 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND------SDLPEGYYPG 203 + + F G V R ++ D G Q L Y + + N+D SDL Y Sbjct: 142 VVRTLEFLGNTVIRANHVGDWGTQFGMLI-----AYLEKVQNDDVKDLDLSDLEAFYRAA 196 Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 + + A K + ++ L +Y + K++ D+ QH Sbjct: 197 KHAYDSDEAFAKKSRNYVVK------LQSGDEYCLTMWRKLV--DITMAQCQH------- 241 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFR---STMVG 317 + R + + RD D + +Y +LP K + D ++F + G Sbjct: 242 TYDRLNVTLTRD--DTMGES--LYNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAG 297 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 D + + K DG Y Y D+A +Y + + ++ +D + L A A + + Sbjct: 298 DPMGVIIQKKDGGYLYTTTDIAAAAYRYHTLHADRV-ILFTDAR---QTLHAQQAWLITR 353 Query: 378 KAQI--NVLLCEL----VRLYRDGMPIKMSKRAGDFITL--------------------- 410 KA + + E + L +DG P K R G + L Sbjct: 354 KAGFVPDEFVMEHFTFGMMLGKDGKPFKT--RTGGTVKLADLLDEAIERATTLIKQKNPD 411 Query: 411 ------RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 R VV+ V +V++ L + + FD+ + + N Y+QYAY R RSI Sbjct: 412 LSAEEKRAVVEAVAIGAVKYSDLSKNRNTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSI 470 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 F +A LD ++ E + E L V L ++ V+ P+ L Y Sbjct: 471 FARAG-----LDMADIGGEIVIHEDK----ERALAVKLLQFEEVLLLVAKDGMPHLLCQY 521 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 L++LA +F + P L +++ K RL+L A + GL ++G+++ + Sbjct: 522 LFELAGIFSSFY---EACPIL----SSDDKTKTSRLRLAALTAKTLKQGLQLLGIKTVEK 574 Query: 585 M 585 M Sbjct: 575 M 575 >gi|166154668|ref|YP_001654786.1| arginyl-tRNA synthetase [Chlamydia trachomatis 434/Bu] gi|166155543|ref|YP_001653798.1| arginyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335938|ref|ZP_07224182.1| arginyl-tRNA synthetase [Chlamydia trachomatis L2tet1] gi|165930656|emb|CAP04153.1| arginyl-tRNA synthetase [Chlamydia trachomatis 434/Bu] gi|165931531|emb|CAP07107.1| arginyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 563 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 141/585 (24%), Positives = 225/585 (38%), Gaps = 102/585 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH N AM L+R L P IAE IVA I P S+ IAG GFIN S +L L Sbjct: 39 GHYQCNDAMKLARVLRKSPRAIAESIVAHIPPAP-FSSIEIAGAGFINFTFSKEFLASQL 97 Query: 103 SSI---VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 + + +G KV I+F S N MHVGH R ++GD LA +F G+ Sbjct: 98 QTFSKELANGFR-----AASPQKVIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGH 152 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 +V R +I D G L + Q+A+ H ++L Y Sbjct: 153 DVLRLNHIGDWGTAFGMLITYLQETSQEAI------------------HQLEDLTALYKK 194 Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDIID 278 F E+ ++V A+ D +AL + I +SE F I I+D Sbjct: 195 AHARFAEDSEFKKRSQHNVVALQS---GDAQALALWKQICSVSEKSFQ-----TIYSILD 246 Query: 279 -NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS----TMVGDDVDRPLL--KSDGSY 331 L +G E P ++ D++ K L+ S + + PL+ KSDG Y Sbjct: 247 VELHTRG---ESFYNPFLAEVV--ADLESKNLVTLSDGAKCVFHEAFSIPLMIQKSDGGY 301 Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 Y D+A + + ++ D ++ V S S + + LEA A ++ + Sbjct: 302 NYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLLEATCLAAGYLPSK-GIFSHVGFG 360 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVR 423 L D K R+G+ I LR ++D +G ++++ Sbjct: 361 LVLDTQGRKFKTRSGENIKLRELLDTAVEKAKESLKAHRPDISEEELAYQGPILGINAIK 420 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + L F F K+ + + N + YAY R + I R+ Sbjct: 421 YADLSSHRINDYVFSFEKML-RFEGNTAMSLLYAYVRIQGIKRR------------MGLE 467 Query: 484 VIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 +PQE + +E L + L +P +++ P+ L YLY L + F Sbjct: 468 SLPQEGPLAIHEPAEEALALTLLRFPEILDLTLRELCPHFLTDYLYALTNKF-------- 519 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N R RL L +++G++++G+++ N + Sbjct: 520 -NTFFRDCHIEGSDSQQERLYLCGLTERTLSTGMHLLGLKTLNHL 563 >gi|296435982|gb|ADH18156.1| arginyl-tRNA synthetase [Chlamydia trachomatis G/9768] gi|296437843|gb|ADH20004.1| arginyl-tRNA synthetase [Chlamydia trachomatis G/11074] gi|297140343|gb|ADH97101.1| arginyl-tRNA synthetase [Chlamydia trachomatis G/9301] Length = 563 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 142/585 (24%), Positives = 224/585 (38%), Gaps = 102/585 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH N AM L+R L P IAE IVA I P S+ IAG GFIN S +L L Sbjct: 39 GHYQCNDAMKLARVLHKSPRAIAESIVAHIPPTP-FSSIEIAGAGFINFTFSKEFLASQL 97 Query: 103 SSI---VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 + + +G KV I+F S N MHVGH R ++GD LA +F G+ Sbjct: 98 QTFSKELANGFR-----AASPQKVIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGH 152 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 +V R +I D G L + Q+A+ H ++L Y Sbjct: 153 DVLRLNHIGDWGTAFGMLITYLQETSQEAI------------------HQLEDLTALYKK 194 Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDIID 278 F E+ ++V A+ D +AL + I +SE F I I+D Sbjct: 195 AHARFAEDSEFKKRSQHNVVALQS---GDAQALALWKQICSVSEKSFQ-----TIYSILD 246 Query: 279 -NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS----TMVGDDVDRPLL--KSDGSY 331 L +G E P ++ D++ K L+ S + + PL+ KSDG Y Sbjct: 247 VELHTRG---ESFYNPFLAEVV--ADLESKNLVTLSDGAKCVFHEAFSIPLMIQKSDGGY 301 Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 Y D+A + + ++ D ++ V S S + + LEA A ++ + Sbjct: 302 NYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLLEATCLAAGYLPSK-GIFSHVGFG 360 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVR 423 L D K R+G+ I LR ++D +G ++++ Sbjct: 361 LVLDTQGRKFKTRSGENIKLRELLDTAVEKAKESLKAHRPDISEEELAYQGPILGINAIK 420 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + L F F K+ + + N + YAY R + I R+ P Sbjct: 421 YADLSSHRINDYVFSFEKML-RFEGNTAMSLLYAYVRIQGIKRRMGLESP---------- 469 Query: 484 VIPQESEFDT---SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 PQE +E L + L +P +++ P+ L YLY L + F Sbjct: 470 --PQEGPLAVHGPAEEALALTLLRFPEILDLTLRELCPHFLTDYLYALTNKF-------- 519 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N R RL L +++G++++G+++ N + Sbjct: 520 -NAFFRDCHIEGSDSQQERLYLCGLTERTLSTGMHLLGLKTLNHL 563 >gi|257067855|ref|YP_003154110.1| arginyl-tRNA synthetase [Brachybacterium faecium DSM 4810] gi|256558673|gb|ACU84520.1| arginyl-tRNA synthetase [Brachybacterium faecium DSM 4810] Length = 588 Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 142/587 (24%), Positives = 231/587 (39%), Gaps = 89/587 (15%) Query: 48 NAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVV 107 NAAM L++ LG P IA IVA + + ++ IAG GF+N+ L ++ + + Sbjct: 42 NAAMGLAKRLGRKPRDIAAEIVAAVDLADIAETPEIAGPGFLNIRLRTDWVAAQAAELTA 101 Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167 G + V +++ + N MHVGH R VVGD++A + G+ V R+ +I Sbjct: 102 PSAALGVPAPERAQTVVLDYSAPNVAKEMHVGHLRTTVVGDSIARTLEKLGHTVVRQNHI 161 Query: 168 NDAGAQINTLA---LSVFWRYQQA-LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN 223 D G L L V +A L D P +Y K E A Sbjct: 162 GDWGTPFGMLIEHLLEVGEDSAEAELLKTD---PNAFYQAARAKFDAAEAAGAADD---- 214 Query: 224 FPEEKWLPIVKDYSVQAMMKII---RDDLKALNIQHDIF-ISEDDFHRGDPSPIRDIID- 278 D++ +A ++ D ++L I ++ +S+ FHR I D++D Sbjct: 215 ---------GSDFASRARARVATLQSGDAESLRIWTNLVELSKQYFHR-----IYDMLDV 260 Query: 279 NLARQGYVYEGILPPPKSKTTQKCD----------MDRKQLLFRSTMVG-DDVDRPLL-- 325 L + E + CD D +F + G D+ PL+ Sbjct: 261 TLTDEHLAGESTY---NDQLAAVCDDLEAAGIARISDGALCVFPAGFTGRDEQPLPLIIR 317 Query: 326 KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHS-----GYVKRLEA--VAAAVSEK 377 KSDG Y Y DLA + + + G D + YV+GS + EA + V + Sbjct: 318 KSDGGYGYATTDLAALRHRVRDLGADRIGYVVGSAQELHFTMVFTSAREAGWLPEQVEAE 377 Query: 378 KAQINVLLCELVRLY--RDGMPIK-MSKRAGDFITLRHVVDE----------------VG 418 +I +L E ++ R G ++ M+ R V+DE +G Sbjct: 378 HVKIGSVLGEDGKILRTRSGSSLRLMALLEEAVAAARTVIDELRPDLPEAEREQIAHDIG 437 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 V++ L + FD ++ + N Y+QYA AR RSI R+A Sbjct: 438 IGGVKYADLSTAHDSDYTFDLDRMLALTG-NTAPYLQYAVARIRSIGRKAAAQGVAAAPA 496 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 N +E L + L E+ + + EP++L YL+ LA F + Sbjct: 497 PHVEN---------DAERALALQLLEFGPTLVSVGAEFEPHRLCAYLFSLAQAFTSFY-- 545 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +P L+ + ++ RL L ++ GL+ +GV +P +M Sbjct: 546 -EASPILK---EADEQVRAGRLALAELTERVLVEGLDALGVNAPQQM 588 >gi|91218027|ref|ZP_01254978.1| arginyl-tRNA synthetase [Psychroflexus torquis ATCC 700755] gi|91183774|gb|EAS70166.1| arginyl-tRNA synthetase [Psychroflexus torquis ATCC 700755] Length = 592 Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 133/583 (22%), Positives = 237/583 (40%), Gaps = 86/583 (14%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112 L R + +P+ + E I + + S F KGF+NL L+ SY + ++ S+ Sbjct: 46 LLRHIKTNPVQLGEQIGEYLSKHSSLVSEFNVVKGFLNLSLTESYFKDLVVSMSQDENFG 105 Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172 R KV +E+ S N P+H+GH R ++G ++A + +G V + IND G Sbjct: 106 FRKATPTSQKVMVEYSSPNTNKPLHLGHIRNNLLGFSVAEIQKAAGKHVYKTQIINDRGI 165 Query: 173 QI--NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH-VGK---ELADKYSSELLNFPE 226 I + LA F + + PE G+ H VGK + Y SE+ N + Sbjct: 166 HICKSMLAWQKF---------GEEETPES--SGLKGDHLVGKYYVKFDKAYKSEIENLLK 214 Query: 227 E--------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 E K PI+ + + + K DL+ + + + + G + ++ Sbjct: 215 EGKTEEEAKKQAPILLE-AQNMLQKWEAGDLEVVKLWKTM---NKWVYEGFETTYTNLGV 270 Query: 279 NLARQGYVYEG-ILPPPKSKTTQKCDM----DRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333 N + Y + IL KT + + D + + G D ++ +L+SDG+ Y Sbjct: 271 NFDKNYYESDTYILGKDHIKTGLETGVFFTKDDGSVWIDLSNEGLD-EKIVLRSDGTSVY 329 Query: 334 FAADLAY-FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 D+ + + D MIY +G++ + K L + + + A+ L L Sbjct: 330 MTQDIGTAIQRVTDYDIDEMIYTVGNEQDYHFKVLFLILKKLGFEWAE---HLYHLSYGM 386 Query: 393 RDGMPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVR 423 D KM R G + +++E +G +++ Sbjct: 387 VDLPSGKMKSREGKVVDADDLIEEMTSTARSISQELGKLEGYDDDEKNRLYKMIGLGALK 446 Query: 424 FMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 + +L + + FD + V Q P ++QY YAR +SI R+ K DL+ + Sbjct: 447 YYILKVDPKKRILFDPKESVDFQGNTGP--FIQYTYARIQSILRKGKKESKDLNLSSY-- 502 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 EF++ E LI L ++P +I+ A P +A Y+YDL F+ + + Sbjct: 503 -------EFNSKEKSLIKILNQFPELIQQAAEQYSPALIANYVYDLVKEFNSFYQN---- 551 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + A+ R++L V +I ++G+E PN+M Sbjct: 552 --VSILGADEEHQIEFRVELSRLVGEVIKKSFKVLGIEVPNQM 592 >gi|237802882|ref|YP_002888076.1| arginyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT] gi|231274116|emb|CAX10910.1| arginyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT] Length = 563 Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 141/585 (24%), Positives = 225/585 (38%), Gaps = 102/585 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH N AM L+R L P IAE IVA I P S+ IAG GFIN S +L L Sbjct: 39 GHYQCNDAMKLARVLRKSPRAIAESIVAHIPPAP-FSSIEIAGAGFINFTFSKEFLASQL 97 Query: 103 SSI---VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 + + +G KV I+F S N MHVGH R ++GD LA +F G+ Sbjct: 98 QTFSKELANGFR-----AASPQKVIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGH 152 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 +V R +I D G L + Q+A+ H ++L Y Sbjct: 153 DVLRLNHIGDWGTAFGMLITYLQETSQEAI------------------HQLEDLTALYKK 194 Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDIID 278 F E+ ++V A+ D +AL + I +SE F I I+D Sbjct: 195 AHARFAEDSEFKKRSQHNVVALQS---GDAQALALWKQICSVSEKSFQ-----TIYSILD 246 Query: 279 -NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS----TMVGDDVDRPLL--KSDGSY 331 L +G E P ++ D++ K L+ S + + PL+ KSDG Y Sbjct: 247 VELHTRG---ESFYNPFLAEVV--ADLESKNLVTLSDGAKCVFHEAFSIPLMIQKSDGGY 301 Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 Y D+A + + ++ D ++ V S S + + LEA A ++ + Sbjct: 302 NYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLLEATCLAAGYLPSK-GIFSHVGFG 360 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVR 423 L D K R+G+ I LR ++D +G ++++ Sbjct: 361 LVLDTQGRKFKTRSGENIKLRELLDTAVEKAKESLKAHRPDISEEELAYQGPILGINAIK 420 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + L F F K+ + + N + YAY R + I R+ Sbjct: 421 YADLSSHRINDYVFSFEKML-RFEGNTAMSLLYAYVRIQGIKRR------------MGLE 467 Query: 484 VIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 +PQE + +E L + L +P +++ P+ L YLY L + F Sbjct: 468 SLPQEEPLAIHEPAEEALALTLLRFPEILDLTLRELCPHFLTDYLYALTNKF-------- 519 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N R RL L +++G++++G+++ N + Sbjct: 520 -NAFFRDCHIEGSDSQQERLYLCGLTERTLSTGMHLLGLKTLNHL 563 >gi|291044019|ref|ZP_06569735.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae DGI2] gi|291012482|gb|EFE04471.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae DGI2] Length = 581 Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 122/584 (20%), Positives = 242/584 (41%), Gaps = 76/584 (13%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 34 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 93 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L +L + + + ++ +G + V I++ S N MHVGH R +++GD+++ Sbjct: 94 RLRHEFLAQNIHA-ALNDARFGVAKTAQPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 152 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ F+G V R+ ++ D G Q L + + + +DL + Y Sbjct: 153 RVLEFTGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 212 Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 AD + L +E L + K D S+ + D L ++ + E ++ Sbjct: 213 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 270 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 ++ ++D+L +G E +K + K+ G+ + K Sbjct: 271 ----DDLQPVVDDLVEKGLAVE----DDGAKVVFLDEFKNKE--------GEPAAFIVQK 314 Query: 327 SDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINV 383 G + Y + DLA + + R ++YV+ + + ++L + A + A+ Sbjct: 315 QGGGFLYASTDLACLRYRIGRLKAGRLLYVVDHRQALHFEQLFTTSRKAGYLPENAKAEF 374 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416 + + + +DG P K R+GD + L ++ E Sbjct: 375 IGFGTM-MGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKT 431 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG +V++ L + + FD+ + + N Y+QYAY R +S+FR+A + Sbjct: 432 VGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG------E 484 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 +D V+ + E QL L ++ V+++ P+ LA YLY A++F + Sbjct: 485 WDATAPTVLTE-----PLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQAATLFSRFY 539 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 P L+ A+ RLQL + + GL+++G++ Sbjct: 540 ---EACPILKAEGASRNS----RLQLAKLTGNTLKQGLDLLGID 576 >gi|153810152|ref|ZP_01962820.1| hypothetical protein RUMOBE_00533 [Ruminococcus obeum ATCC 29174] gi|149833331|gb|EDM88412.1| hypothetical protein RUMOBE_00533 [Ruminococcus obeum ATCC 29174] Length = 584 Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 123/600 (20%), Positives = 246/600 (41%), Gaps = 88/600 (14%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 V RP C N AM ++ P IA+ +V+ +K + GFINL Sbjct: 26 VSNRPDLC---EFQCNGAMAGAKAYKKAPFMIADDVVSYLKDSQIFAMAEVVKPGFINLR 82 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 + +L L + +Y K + I++ N P+HVGH R A++G+++ Sbjct: 83 VKEEFLGDYLKKMAADE-KYSVKTAEKPKTIIIDYGGPNVAKPLHVGHLRSAIIGESIKR 141 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP---------- 202 + F G++V + ++ D G Q+ + + R + +Y +D+ EG YP Sbjct: 142 IGRFVGHKVIGDVHLGDWGLQMGLIITELKHRKPELVYFDDT--YEGEYPREAPFTISEL 199 Query: 203 -GVYLKHVGKELAD-KYSSELLNFPE--EKWLP---IVKDYSVQAMMKIIRDDLKALNIQ 255 +Y GK D +Y +E L ++ P + ++ +Q + ++ + LN+ Sbjct: 200 EEIYPCASGKSKEDEEYRNEALEATHQLQQGKPGYMALWNHIMQVSVTDLKRNYANLNVS 259 Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315 D++ E D P D++ + QG+ YE D+ L+ Sbjct: 260 FDLWKKESDAQPYIP----DMVQKMKDQGFAYE----------------DQGALVVDVKE 299 Query: 316 VGDDVDRP---LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA 371 D + P LLKSDG+ Y DLA + + D ++YV+ + ++ A Sbjct: 300 ESDTKEIPPCMLLKSDGASLYTTTDLATIVERVKLFDPDEILYVVDKRQELHFIQVFRCA 359 Query: 372 AAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR- 429 K + + + +DG P K R G + L +++ ++ + ++ R Sbjct: 360 RKTGLVKPETKLSFLGFGTMNGKDGKPFKT--REGGVMRLENLIADIDEEMFHKIVENRS 417 Query: 430 -------KNSELLDFDFCK---VKEQSKENPVF--------------YVQYAYARCRSIF 465 + +E++ K + Q+ ++ VF Y+ Y R +SI Sbjct: 418 VKDQDAKETAEIVGLSAIKYGDLSNQATKDYVFDIDRFTSFEGNTGPYILYTIVRIKSIL 477 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 + K+ +L+ ++P + S+ L++ L ++ IENA + P+K+ Y+ Sbjct: 478 NRYKEEGGNLE----AGEILPA---VNASQKNLMLELTKFGSTIENAFEEKAPHKICAYI 530 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 Y++++ F+ + + + N+ L+L+ I+ + ++++G +P+ M Sbjct: 531 YEVSNAFNSFYHE------TKILSEENQAQKESFLKLLGLTKDILETSIDLLGFSAPDRM 584 >gi|240080907|ref|ZP_04725450.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae FA19] gi|240117776|ref|ZP_04731838.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID1] gi|240123331|ref|ZP_04736287.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID332] gi|240128034|ref|ZP_04740695.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035] gi|268597025|ref|ZP_06131192.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae FA19] gi|268603476|ref|ZP_06137643.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID1] gi|268681956|ref|ZP_06148818.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID332] gi|268686424|ref|ZP_06153286.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035] gi|268550813|gb|EEZ45832.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae FA19] gi|268587607|gb|EEZ52283.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID1] gi|268622240|gb|EEZ54640.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID332] gi|268626708|gb|EEZ59108.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035] Length = 572 Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 127/590 (21%), Positives = 241/590 (40%), Gaps = 88/590 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L +L + + + ++ +G K V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRHEFLAQNIHA-ALNDARFGIAQTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ F+G V R+ ++ D G Q L V + +Q N +L Sbjct: 144 RVLEFTGNTVIRQNHVGDWGTQFGML---VAYLVEQQKDNAAFELA-------------- 186 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 +L Y + + F E+ P D + + ++K+ D L + D Sbjct: 187 DLEQFYRAAKVRFDED---PAFADTAREYVVKLQGGDETVLALWKQFV----DISLSHAQ 239 Query: 272 PIRDIIDNLARQGYV-----YEGILPPPKSKTTQK---CDMDRKQLLFRSTMV---GDDV 320 + D + R V Y L P QK + D +++F G+ Sbjct: 240 AVYDTLGLKLRPEDVAGESKYNDDLQPVADDLVQKGLAVEDDGAKVVFLDEFKNKEGEPA 299 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEK 377 + K G + Y + DLA + + R ++YV+ + + ++L + A + Sbjct: 300 AFIVQKQGGGFLYASTDLACLRYRIGRLKAGRLLYVVDHRQALHFEQLFTTSRKAGYLPE 359 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416 A+ + + + +DG P K R+GD + L ++ E Sbjct: 360 NAKAEFIGFGTM-MGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEA 416 Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 VG +V++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 417 AKIGKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG- 474 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 ++D V+ + E QL L ++ V+++ P+ LA YLY A+ Sbjct: 475 -----EWDATAPTVLTE-----PLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQAAT 524 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 +F + P L+ A+ RLQL + + GL+++G++ Sbjct: 525 LFSRFY---EACPILKAEGASRNS----RLQLAKLTGNTLKQGLDLLGID 567 >gi|326561173|gb|EGE11538.1| arginyl-tRNA synthetase [Moraxella catarrhalis 7169] Length = 575 Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 135/601 (22%), Positives = 240/601 (39%), Gaps = 100/601 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ LG++P A+ ++ + ID + + IAG GFIN++ Sbjct: 27 LVRQSNKIQFGDYQANGIMGAAKKLGINPREFAQTVLDHLSIDDIAEKLEIAGPGFINIF 86 Query: 93 LSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 L ++ + + +S G+ +N V +++ S N MHVGH R ++GD+ Sbjct: 87 LKNEWISRHANQANISRTLGVNTAQN-----DTVVVDYSSPNVAKEMHVGHLRSTIIGDS 141 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND------SDLPEGYYPG 203 + + F G V R ++ D G Q L Y + + N+D SDL Y Sbjct: 142 VVRTLEFLGNTVIRANHVGDWGTQFGMLI-----AYLEKVQNDDVKDLDLSDLEAFYRAA 196 Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 + + A K + ++ L +Y + K++ D+ QH Sbjct: 197 KHAYDSDEAFAKKSRNYVVK------LQSGDEYCLTMWRKLV--DITMAQCQH------- 241 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFR---STMVG 317 + R + + RD D + +Y +LP K + D ++F + G Sbjct: 242 TYDRLNVTLTRD--DTMGES--LYNPMLPSIVQTLKDKGLAVEDDGAVVVFLDEFTNKAG 297 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 D + + K DG Y Y D+A +Y + + ++ +D + L A A + + Sbjct: 298 DPMGVIIQKKDGGYLYTTTDIAAAAYRYHTLHADRV-ILFTDAR---QTLHAQQAWLITR 353 Query: 378 KAQI--NVLLCEL----VRLYRDGMPIKMSKRAGDFITL--------------------- 410 KA + + E + L +DG P K R G + L Sbjct: 354 KAGFVPDEFVMEHFTFGMMLGKDGKPFKT--RTGGTVKLADLLDEAIERATTLIKQKNPD 411 Query: 411 ------RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 R VV+ V +V++ L + + FD+ + + N Y+QYAY R RSI Sbjct: 412 LSAEEKRAVVEAVAIGAVKYSDLSKNRNTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSI 470 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 F +A LD ++ E + E L V L ++ V+ P+ L Y Sbjct: 471 FARAG-----LDMADIGGEIVIHEDK----ERALAVKLLQFEEVLLLVAKDGMPHLLCQY 521 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 L++LA +F + P L +++ K RL+L A + GL ++G+++ + Sbjct: 522 LFELAGIFSSFY---EACPIL----SSDDKTKTSRLRLAALTAKTLKQGLQLLGIKTVEK 574 Query: 585 M 585 M Sbjct: 575 M 575 >gi|76789190|ref|YP_328276.1| arginyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13] gi|237804804|ref|YP_002888958.1| arginyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT] gi|109894982|sp|Q3KLP4|SYR_CHLTA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|76167720|gb|AAX50728.1| arginyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13] gi|231273104|emb|CAX10017.1| arginyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT] Length = 563 Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 141/585 (24%), Positives = 225/585 (38%), Gaps = 102/585 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH N AM L+R L P IAE IVA I P S+ IAG GFIN S +L L Sbjct: 39 GHYQCNDAMKLARVLRKSPRAIAESIVAHIPPAP-FSSIEIAGAGFINFTFSKEFLASQL 97 Query: 103 SSI---VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 + + +G KV I+F S N MHVGH R ++GD LA +F G+ Sbjct: 98 QTFSKELANGFR-----AASPQKVIIDFSSPNIAKDMHVGHLRSTIIGDCLARCFSFVGH 152 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 +V R +I D G L + Q+A+ H ++L Y Sbjct: 153 DVLRLNHIGDWGTAFGMLITYLQETSQEAI------------------HQLEDLTALYKK 194 Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDIID 278 F E+ ++V A+ D +AL + I +SE F I I+D Sbjct: 195 AHARFAEDSEFKKRSQHNVVALQS---GDAQALALWKQICSVSEKSFQ-----TIYSILD 246 Query: 279 -NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS----TMVGDDVDRPLL--KSDGSY 331 L +G E P ++ D++ K L+ S + + PL+ KSDG Y Sbjct: 247 VELHTRG---ESFYNPFLAEVV--ADLESKNLVTLSDGAKCVFHEAFSIPLMIQKSDGGY 301 Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 Y D+A + + ++ D ++ V S S + + LEA A ++ + Sbjct: 302 NYATTDVAAMRYRIQQDQADRILIVTDSGQSLHFQLLEATCLAAGYLPSK-GIFSHVGFG 360 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVR 423 L D K R+G+ I LR ++D +G ++++ Sbjct: 361 LVLDTQGRKFKTRSGENIKLRELLDTAVEKAKESLKAHRPDISEEELAYQGPILGINAIK 420 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + L F F K+ + + N + YAY R + I R+ Sbjct: 421 YADLSSHRINDYVFSFEKML-RFEGNTAMSLLYAYVRIQGIKRR------------MGLE 467 Query: 484 VIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 +PQE + +E L + L +P +++ P+ L YLY L + F Sbjct: 468 SLPQEEPLAIHEPAEEALALTLLRFPEILDLTLRELCPHFLTDYLYALTNKF-------- 519 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N R RL L +++G++++G+++ N + Sbjct: 520 -NAFFRDCHIEGSDSQQERLYLCGLTERTLSTGMHLLGLKTLNHL 563 >gi|71985061|ref|NP_001022551.1| aRginyl aa-tRNA syntheTase family member (rrt-1) [Caenorhabditis elegans] gi|21431831|sp|Q19825|SYRC_CAEEL RecName: Full=Probable arginyl-tRNA synthetase, cytoplasmic; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|15789291|gb|AAA91224.2| Arginyl aa-trna synthetase protein 1, isoform a, confirmed by transcript evidence [Caenorhabditis elegans] Length = 713 Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 137/584 (23%), Positives = 252/584 (43%), Gaps = 74/584 (12%) Query: 43 GHLSTNAAMILSRPLGLD-----PLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPS 96 G N+AM ++ L + P +A+ I A++ D V+ + + GFIN++L+ Sbjct: 163 GDYQCNSAMPIAAKLKANKINKRPGDVAKEIQAKLPTKIDFVEKIDVMPAGFINIFLNTD 222 Query: 97 YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 YLR+ +S + G++ + L K +V ++F S N MHVGH R ++GD++ L Sbjct: 223 YLRRQISLLASEGVKLPK-LTRK--RVLVDFSSPNIAKEMHVGHLRSTIIGDSICRLFEA 279 Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216 G++V R +I D G Q L ++ R+ L LP+ + K K Sbjct: 280 VGFDVLRVNHIGDWGTQFGMLIAHLYDRFPDFL----KKLPDISDLQAFYKESKKRF--- 332 Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF-HRGDPSPIRD 275 E F + + +VK S D +KA N D+ + + I+D Sbjct: 333 --DEDEQFKKRAYEYVVKLQSHDG------DIVKAWNTICDVSKKYNQIVYNYLDIKIKD 384 Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + + + + ++ K T K DM D +Q++F + G D+ ++KSDG + Sbjct: 385 V-----GESFYQDKMIELVKWVKTNKPDMLREEDGRQIMFPT---GCDIPLTVVKSDGGF 436 Query: 332 TYFAADLAYFKCKY-ERGFDNMIYVMGSDHS-------------GY----VKRLEAVAAA 373 TY +DLA K + E D IYV+ S S G+ ++R+E VA Sbjct: 437 TYDTSDLAALKYRMLEEKCDWNIYVVDSGQSLHLETVYAAGRDFGWYDESIQRVEHVAFG 496 Query: 374 V------------SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 + S + ++ LL E V+ + + K + A L D V Sbjct: 497 LVLGDDKKKFKTRSGETVRLLDLLSEGVKRATEKLIEKGRETAMSEEQLVAARDAVAFGC 556 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 V++ L ++ F F ++ E + N Y+ YAY R +SIF + + DL + Sbjct: 557 VKYADLSHTRTQDYVFSFDRMLE-DRGNTAVYLLYAYTRIQSIFEKDEVKNVDLVKYIAS 615 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 +P + + + ++ L++ ++ ++ + +++ Y+Y LA++FH ++ E Sbjct: 616 TPTLPLDHPGEFKLAKQLLKLSDCVLLVLDSLML---HQMCDYVYQLATLFHDFYN---E 669 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + M RL L ++++ I+G+ N+M Sbjct: 670 CYVIENKEGEKPFVHMHRLALCDVTRKVMSTCFKILGLREVNKM 713 >gi|90076998|dbj|BAE88179.1| unnamed protein product [Macaca fascicularis] Length = 380 Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 89/344 (25%), Positives = 165/344 (47%), Gaps = 38/344 (11%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S+ L ++P IAE I + + ++ V IAG GFIN++L + Sbjct: 39 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDF 98 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + L+S++V+G++ +G+ KV ++F S N MHVGH R ++G++++ L F+ Sbjct: 99 VSEQLTSLLVNGVQL--PAVGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESVSRLFEFA 156 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215 GY+V R ++ D G Q L + ++ L + DL + +Y + +E Sbjct: 157 GYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDL-QAFYKESKKRFDTEEEFK 215 Query: 216 KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SP 272 K + + + + K I K + + + + R + + D+ + E RG+ Sbjct: 216 KRAYQCVVLLQGKNPDITKAWKL--ICDVSRQEFNKIYDALDVSLIE----RGESFYQDR 269 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + DI+ +G+V + D D ++++F + G + ++KSDG YT Sbjct: 270 MNDIVQEFEDRGFV--------------QVD-DGRKIVF---VPGCSIPLTIVKSDGGYT 311 Query: 333 YFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375 Y +DLA K + E D +IYV+ S S + + + A A + Sbjct: 312 YDTSDLAAIKQRLSEEKADMIIYVVDSGQSVHFQTIFAAAQMIG 355 >gi|1217668|gb|AAB35627.1| arginyl-tRNA synthetase [Homo sapiens] Length = 659 Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 137/609 (22%), Positives = 253/609 (41%), Gaps = 114/609 (18%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGK 86 +++ + G N+AM +S+ L ++P AE I + + V AG Sbjct: 100 LLVTPSQQAKFGDYQCNSAMGISQMLKTKEPEVNPGEFAENITKHLPAMDVLKRVEFAGP 159 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GFIN +L ++ + L+S++V+G++ +G+ KV ++F S N MHVGH R ++ Sbjct: 160 GFINGHLRKDFVSEQLTSLLVNGVQL--PALGENKKVIVDFSSPNIAKEMHVGHLRSTII 217 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQ 187 G++++ L F+GY+V R ++ D G Q L L VF++ + Sbjct: 218 GESISRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQVFYKESK 277 Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247 ++ + + + Y V L GK P+ I K Y + M + R Sbjct: 278 KRFDTEEEFKKRAYQCVVLLQ-GKN------------PD-----ITKAYLL--MSDVSRQ 317 Query: 248 DLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 +L + D+ + E RG+ + DI+ +G+V + D Sbjct: 318 ELNKIYDALDVSLIE----RGESFYQDRMNDIVKEFEDRGFV--------------QVD- 358 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGY 363 D ++++F + G + ++KSDG YTY +DLA K + +E D +IYV+ + S + Sbjct: 359 DGRKIVF---VPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVH 415 Query: 364 VKRLEAVAAAV-------------------SEKKAQINVLLCELVRLYR---DGMPIKMS 401 + + A A + E K + E VRL +G+ M Sbjct: 416 FQTIFAAAQMIGWYDPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSMD 475 Query: 402 K---RAGDFI----TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454 K + D + L V +++ L F F K+ + + N Y+ Sbjct: 476 KLKEKERDKVLTAEELNAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYL 534 Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF---DTSELQLIVHLAEYPRVIEN 511 YA+ R RSI R A ++D ++ + +E++ E +L + +P +++ Sbjct: 535 LYAFTRIRSIARLA-----NIDEEMLQKAA--RETKILLVHEKEWKLGRCILRFPEILQK 587 Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571 + L Y+Y+LA+ F + + R K+ M R+ L VA+++ Sbjct: 588 ILDDLFLHTLCDYIYELATAFTEFYDSCYCVEKDRQT-GKILKVNMWRI-LCETVAAVMA 645 Query: 572 SGLNIIGVE 580 G + +G++ Sbjct: 646 KGFDTLGIK 654 >gi|307104781|gb|EFN53033.1| hypothetical protein CHLNCDRAFT_26194 [Chlorella variabilis] Length = 601 Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 125/546 (22%), Positives = 219/546 (40%), Gaps = 69/546 (12%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +AE +VA + V +AG GFIN+ +SP +L L++++ GI Sbjct: 95 NPRAVAEALVAHLPETGMVAETSLAGPGFINIRISPDWLASHLTTMLRQGISTWAPAGYA 154 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +V ++F S N MHVGH R ++GDTLA + F G +V R +I D G Q L Sbjct: 155 GRRVVVDFSSPNVAKEMHVGHLRSTIIGDTLAHTLEFCGADVLRLNHIGDWGTQFGMLIQ 214 Query: 180 SVFWRYQQAL-YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 + + + L +D D+ ++L Y + F EE+ +V Sbjct: 215 YIAEKRPEGLNAASDEDV--------------QDLQVLYRAAKQRFDEEEAFKQRAREAV 260 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA-----RQGYVYEGILPP 293 + + L+A Q S +F + I D L R Y +L P Sbjct: 261 TELQGGRPEYLQACAWQRICDASRREFQK--------IYDRLGVQLQERGESFYNPMLKP 312 Query: 294 PKSKTTQKC---DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGF 349 Q+ + D + +F + G + + KSDG + Y + D+A K + E Sbjct: 313 VVDDLMQRGIAEESDGAKCVF---VEGAQIPLIVQKSDGGFGYASTDMAAVKHRIETEKA 369 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVS-----------EKKAQINVLLCELVRLYRDGMPI 398 D +IYV S + + ++ V L EL+ + + Sbjct: 370 DWIIYVTDMGQSSHFDLVGGGGRGHGGGGGGGDGKKFRSRSGDVVRLVELLDEAKQRIVD 429 Query: 399 KMSKRAGDFI--TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQ 455 + +R D + + +G +V++ L KN ++ F S++ N Y Sbjct: 430 TVKERRPDATPEEIEEMAAAMGYGAVKYADL--KNHRTTNYKFSYDDMLSQQGNTAVYQL 487 Query: 456 YAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514 YA+AR SI R++ +D+ + R V+ E E+ L + +A + ++ Sbjct: 488 YAHARIASIVRKSGRDVS---ELAKTARVVLGHE-----KEVALALQIARFSDAVDECLA 539 Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 P+++ YLYDL++ F+ ++ Q RL L A A + + Sbjct: 540 ELLPHRITEYLYDLSTAFNQFYTE---------CQVVGSPEEDSRLLLCEATALTMRTCF 590 Query: 575 NIIGVE 580 ++G++ Sbjct: 591 QLLGIQ 596 >gi|257869595|ref|ZP_05649248.1| arginyl-tRNA synthetase [Enterococcus gallinarum EG2] gi|257803759|gb|EEV32581.1| arginyl-tRNA synthetase [Enterococcus gallinarum EG2] Length = 563 Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 140/597 (23%), Positives = 258/597 (43%), Gaps = 104/597 (17%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFINL 91 ++E P+ HG ++ A L++ P IA + KIDP + + + G ++N Sbjct: 27 LLENPKTAEHGDVAF-PAFALAKVYRKAPQQIASELAE--KIDPASFEKIEVVGP-YLNF 82 Query: 92 YLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +++ + + +L +++ YG IG V I+ S N P+ +GH R V+G+++ Sbjct: 83 FMNKEVISEHVLQTVLKEKNHYGDQSIGNQQAVPIDMSSPNIAKPISMGHLRSTVIGNSI 142 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHV 209 ++ GY+ R ++ D G Q L ++ W ++A+ P +Y++ Sbjct: 143 GFILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEEAVKKE----PINELLRLYVEFH 198 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFH 266 + DK L W ++D +A + + RD+ L+ N +D+ E F Sbjct: 199 EQAENDK----ALEDEARAWFKKLEDGDQEATELWQWFRDESLQEFNKIYDML--EVSF- 251 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD----- 321 D+L + + K T+ ++ ++ L + + VD Sbjct: 252 -----------DSLNGEAFY--------NDKMTEVVELLEEKHLLQEDQGAEIVDLTAYD 292 Query: 322 -RPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV----- 370 P L KSDG+ Y D+A Y K Y F +YV+G++ S + K+L+AV Sbjct: 293 LNPALIRKSDGATLYITRDMAAALYRKRTY--NFAKSLYVVGNEQSYHFKQLKAVLKEMG 350 Query: 371 ------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412 +S +K +I VLL E++ + +++++ Sbjct: 351 FDWSDDMHHIPFGLITKDGKKLSTRKGKI-VLLEEVLNEAIESAKEQITEKNPGLANKDE 409 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAK 469 V +VG +V F L KN L +FDF V+ + + P YVQY++AR SI +A+ Sbjct: 410 VAKQVGVGAVVFHDL--KNDRLNNFDFTLEEVVRFEGETGP--YVQYSHARAMSILEKAQ 465 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE-YPRVIENATIAQEPYKLAFYLYDL 528 FD P N Q + +E ++ L + YP I A EP +A + L Sbjct: 466 -------FD--PANA--QALALNDAESWEVIKLIQRYPETILQAADKYEPSVIAKHAIKL 514 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A F+ ++++ ++ + + +K RL LV+AV ++ L ++G+ +P++M Sbjct: 515 AQAFNKYYAN------VKILAEDAQKDA--RLALVYAVTVLLKEDLRLLGLHAPDKM 563 >gi|312886568|ref|ZP_07746176.1| arginyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603] gi|311300971|gb|EFQ78032.1| arginyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603] Length = 589 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 135/572 (23%), Positives = 235/572 (41%), Gaps = 132/572 (23%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 KGF+N+ ++ +Y K L + ++G +G KG KV +E+ S N P+H+GH R + Sbjct: 78 KGFLNISITDAYWIKQLYT-EIAGDGFG-TFPAKGEKVMVEYSSPNTNKPLHLGHIRNNL 135 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205 +G ++A ++ +GY+V + +ND G I L+ W Q N ++ G Sbjct: 136 LGYSVAEILKANGYDVIKANLVNDRGIHICKSMLA--W---QKFGNGETPESTG------ 184 Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI------F 259 LK G L KY ++ + Y Q D LKA D F Sbjct: 185 LK--GDHLVGKY-----------YVVFDQQYKKQI------DQLKAEGQTEDEAKKNAPF 225 Query: 260 ISE-----DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 I E + + GDP I + + + G+VY G ++T +K +D Q + S Sbjct: 226 IIEAQQMLEKWEAGDPEVIS-LWETM--NGWVYAGF-----AETYKKLGVDFDQYYYESK 277 Query: 315 --MVGDDV----------------------------DRPLLKSDGSYTYFAADLAYFKCK 344 ++G D+ ++ +L+++G+ Y D+ + K Sbjct: 278 TYLLGKDIVDEGLAKGVFFKKEDGSVWIDLTADGLDEKLVLRANGTSVYITQDVGTAQLK 337 Query: 345 Y-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403 Y + D IYV+G++ + K L + + + AQ L L D KM R Sbjct: 338 YNDYHMDKSIYVVGNEQDYHFKVLFLILQKLGKSWAQ---GLFHLSYGMVDLPSGKMKSR 394 Query: 404 AGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSEL 434 G + ++ E +G ++++ +L + + Sbjct: 395 EGTVVDADDLMAEMEQTAKAQTELLGKVNDFDEDEKKQLYHNIGMGALKYFLLKVEPKKR 454 Query: 435 LDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493 L FD + + Q P ++QY +AR +S+ ++A F N E DT Sbjct: 455 LLFDPNESIDFQGHTGP--FIQYTHARIKSVLKRA-------GFKSGQTN--GGTKELDT 503 Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553 E +LI+ L +YP I A P +A Y+Y+LA ++ + +E P L+ A + Sbjct: 504 VERELILALNQYPDAIMQAARDYSPAIIANYVYELAKTYNKFY---QEKPILK---AEDE 557 Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL+L A A II+ ++++G+ P M Sbjct: 558 IIMQFRLELSAASAKIISKAMSLLGINVPERM 589 >gi|260440708|ref|ZP_05794524.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae DGI2] Length = 572 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 122/584 (20%), Positives = 242/584 (41%), Gaps = 76/584 (13%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L +L + + + ++ +G + V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRHEFLAQNIHA-ALNDARFGVAKTAQPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ F+G V R+ ++ D G Q L + + + +DL + Y Sbjct: 144 RVLEFTGNTVIRQNHVGDWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDP 203 Query: 212 ELADKYSSEL--LNFPEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 AD + L +E L + K D S+ + D L ++ + E ++ Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVY--DTLGLKLRPEDVAGESKYN 261 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 ++ ++D+L +G E +K + K+ G+ + K Sbjct: 262 ----DDLQPVVDDLVEKGLAVE----DDGAKVVFLDEFKNKE--------GEPAAFIVQK 305 Query: 327 SDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINV 383 G + Y + DLA + + R ++YV+ + + ++L + A + A+ Sbjct: 306 QGGGFLYASTDLACLRYRIGRLKAGRLLYVVDHRQALHFEQLFTTSRKAGYLPENAKAEF 365 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416 + + + +DG P K R+GD + L ++ E Sbjct: 366 IGFGTM-MGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEAAKIGKT 422 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG +V++ L + + FD+ + + N Y+QYAY R +S+FR+A + Sbjct: 423 VGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG------E 475 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 +D V+ + E QL L ++ V+++ P+ LA YLY A++F + Sbjct: 476 WDATAPTVLTE-----PLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQAATLFSRFY 530 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 P L+ A+ RLQL + + GL+++G++ Sbjct: 531 ---EACPILKAEGASRNS----RLQLAKLTGNTLKQGLDLLGID 567 >gi|262167694|ref|ZP_06035397.1| arginyl-tRNA synthetase [Vibrio cholerae RC27] gi|262023899|gb|EEY42597.1| arginyl-tRNA synthetase [Vibrio cholerae RC27] Length = 592 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 134/620 (21%), Positives = 235/620 (37%), Gaps = 136/620 (21%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ LG +P A+ ++ + ++ IAG GFIN++ Sbjct: 42 LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLEGIASKTEIAGPGFINIF 101 Query: 93 LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 LS +L + + G+ E +N++ ++ + N MHVGH R ++G Sbjct: 102 LSEEFLAAQAEAALADARLGVAQEAPKNIVA-------DYSAPNVAKEMHVGHLRSTIIG 154 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188 D + + F G++V R +I D G Q L L F+R + Sbjct: 155 DAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKK 214 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245 LY+ D E A Y +L F E W +V +Q Sbjct: 215 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ------ 254 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---C 302 ++ ++ R + S R+ + + +Y +LP S K Sbjct: 255 ---------------NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAV 295 Query: 303 DMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358 + D Q++F G+ + + K DG + Y D+A K +YE G D ++Y + S Sbjct: 296 EDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDS 355 Query: 359 DHSGYVKRLEAVAAAVSEKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHV 413 ++ + A + K I NV L + L +DG P K RAG + L + Sbjct: 356 RQHQHLMQ----AWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFKT--RAGGTVRLADL 409 Query: 414 VDEVGSDSVRFMMLWRKNSEL-----------LDFDFCKVKEQSKE-------------- 448 +DE + ++ KN EL + K + SK Sbjct: 410 LDEAQERAK--ALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLA 467 Query: 449 ---NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 N Y+QYAY R S+F +A +D + ++ E + E LI L ++ Sbjct: 468 FEGNTAPYMQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQF 518 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 +++ +P+ + YL++LA +F + + A + RL+L Sbjct: 519 EEAVQSVAREGQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESIKQSRLKLAAL 572 Query: 566 VASIINSGLNIIGVESPNEM 585 A I GL ++G+++ M Sbjct: 573 TAKTIKQGLALLGIDTLERM 592 >gi|152975407|ref|YP_001374924.1| arginyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152024159|gb|ABS21929.1| arginyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98] Length = 562 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 138/609 (22%), Positives = 253/609 (41%), Gaps = 129/609 (21%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID--PDVDSVFIAGKGFIN 90 +IE P+ G + L++ P IA+ I + +K V++V ++N Sbjct: 27 LIETPKQDEFGD-AAFPCFTLAKQYKKAPAQIAKDIASELKGSFFKKVEAV----GPYVN 81 Query: 91 LYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 ++ + S + IL +I+ +YG++ G+ V I++ S N P +GH R ++G+ Sbjct: 82 IFYNRSVVSNHILKTILAEKEKYGQHHFGQEKTVVIDYSSPNIAKPFSMGHLRSTMIGNA 141 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 L + GYEV YI D G Q L ++ + ++ + + E + Sbjct: 142 LKHIAEKCGYEVVGINYIGDWGTQFGKL-ITAYKKWGNKDLVKEDPIRELF--------- 191 Query: 210 GKELADKYSSELLNFPEEK-----WLPIVKDYSVQAMM---KIIRDDLKALNIQHDIFIS 261 +L ++ E+ PE + W ++D +A+ + LK + +++ Sbjct: 192 --QLYVQFHEEVKENPELEEEGRIWFKKLEDNDEEAVFLWNWFRHESLKEFSRIYELLGV 249 Query: 262 EDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 E + +G+ + + ++ L +G + E S Q ++D + + Sbjct: 250 EFENFQGEAFYNDKMDEFVEMLEEKGILEE-------SDGAQVVNLDEENM--------- 293 Query: 319 DVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373 P L KSDG+ Y DL Y + Y GFD +YV+G++ S + Sbjct: 294 ---PPCLIRKSDGATLYATRDLTAALYRQNTY--GFDKALYVVGAEQSLHF--------- 339 Query: 374 VSEKKAQINVLLCELVRLYRDGM---PI--------KMSKRAGDF------------ITL 410 AQ +L +L + +GM P KMS R G + Sbjct: 340 -----AQFFTVLKQLGYTWVEGMQHVPFGLILKDGKKMSTRKGKVVLLEEVLEEAIALAQ 394 Query: 411 RH-------------VVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQY 456 +H V +VG ++ F L + ++F K +K + + P YVQY Sbjct: 395 QHIEEKNPSLKQKAEVAKQVGVGAIIFHDLKNERMHNIEFSLEKMLKFEGETGP--YVQY 452 Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 +AR SI R+ F F L ++ + L+L L ++P+VIE A Sbjct: 453 THARACSILRKEHVEFETATFAL--------NDDYSWNTLKL---LNQFPQVIETAFTKN 501 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 EP + Y+ D+A F+ ++ + +R ++ ++ K + RL LV+AV ++ GL + Sbjct: 502 EPSHITKYILDVAQAFNKYYGN------VRILEDDHEKES--RLALVYAVTIVLKEGLRL 553 Query: 577 IGVESPNEM 585 +G+ +P EM Sbjct: 554 LGIGAPEEM 562 >gi|59801352|ref|YP_208064.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090] gi|75355970|sp|Q5F835|SYR_NEIG1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|59718247|gb|AAW89652.1| putative arginyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090] Length = 572 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 126/592 (21%), Positives = 240/592 (40%), Gaps = 92/592 (15%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L +L + + + ++ +G + V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRHEFLAQNIHA-ALNDARFGVAKTAQPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ F+G V R+ ++ D G Q L V + +Q N +L Sbjct: 144 RVLEFTGNTVIRQNHVGDWGTQFGML---VAYLVEQQKDNAAFELA-------------- 186 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 +L Y + + F E+ P D + + ++K+ D L + D Sbjct: 187 DLEQFYRAAKVRFDED---PAFADTAREYVVKLQGGDETVLALWKQFV----DISLSHAQ 239 Query: 272 PIRDIIDNLARQGYV-----YEGILPPPKSKTTQK---CDMDRKQLLFRSTMV---GDDV 320 + D + R V Y L P QK + D +++F G+ Sbjct: 240 AVYDTLGLKLRPEDVAGESKYNDDLQPVADDLVQKGLAVEDDGAKVVFLDEFKNKEGEPA 299 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVS---- 375 + K G + Y + DLA + + R ++YV+ + + ++L + Sbjct: 300 AFIVQKQGGGFLYASTDLACLRYRIGRLKAGRLLYVVDHRQALHFEQLFTTSRKAGYLPE 359 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416 + KA+ + + +DG P K R+GD + L ++ E Sbjct: 360 DAKAE---FIGFGTMMGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGAD 414 Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG +V++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 415 EAAKIGKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKA 473 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 ++D V+ + E QL L ++ V+++ P+ LA YLY Sbjct: 474 G------EWDATAPTVLTE-----PLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQA 522 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 A++F + P L+ A+ RLQL + + GL+++G++ Sbjct: 523 ATLFSRFY---EACPILKAEGASRNS----RLQLAKLTGNTLKQGLDLLGID 567 >gi|118444117|ref|YP_877668.1| arginyl-tRNA synthetase [Clostridium novyi NT] gi|118134573|gb|ABK61617.1| arginyl-tRNA synthetase [Clostridium novyi NT] Length = 563 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 136/550 (24%), Positives = 227/550 (41%), Gaps = 115/550 (20%) Query: 88 FINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N ++ L IL+ ++ G YG + IG+G V I++ S N P HVGH + Sbjct: 77 YLNFFMDKGSLTSDILNKVLEEGDNYGSSKIGEGKNVTIDYSSPNIAKPFHVGHLFSTSI 136 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYYPGV 204 G+ L ++ F GY ++ D G Q L +S + W +AL + P + Sbjct: 137 GNALYRMLNFEGYNSIGINHLGDWGTQFGKL-ISAYKRWSDDEALEKD----PIKELLRI 191 Query: 205 YLK-HVGKE----LADK---YSSELLNFPEEK---WLPIVKDYSVQAMMKIIRDDLKALN 253 Y+K H E L D+ Y +L + +E+ W K S++ K+ L Sbjct: 192 YVKFHDEAEKDPSLEDEGRMYFKKLEDGEKEEVELW-ERFKTLSLKEFEKV----YDTLG 246 Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313 ++ D + E ++ + I++I D +G+L + Sbjct: 247 VKFDSYAGESFYNDKMDAVIKEIDD---------KGLLVESNGA--------------KV 283 Query: 314 TMVGDDVDRP--LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLE 368 M+ +D P ++K DG+ Y DLA Y K Y+ F IYV+GSD S + K++ Sbjct: 284 VMMDEDNIPPCIIVKGDGATIYATRDLAAAFYRKKNYD--FHKSIYVVGSDQSLHFKQVF 341 Query: 369 AVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 + A+ + LVR K+S R G I L +++E S ++ ++ Sbjct: 342 KTIEKMGYDWAKDCKHVAFGLVRF----ADKKLSTRKGQVIFLEDLLNESVSKTLE--VI 395 Query: 428 WRKNSELLDFD------------FCKVKEQSKENPVF--------------YVQYAYARC 461 KN EL + + F +K + +++ VF YVQY YAR Sbjct: 396 NEKNPELENKEEVAKKVGIGAVIFTYLKNKREKDIVFNWNEMLNFEGETGPYVQYTYARG 455 Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 +SI R+A +I ++++ E +L+ L I NA EP L Sbjct: 456 KSILRRAGEIGEEVNYAALN----------SKEEFELVKVLGNLQEAILNAIDKLEPSIL 505 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM------MRLQLVHAVASIINSGLN 575 Y ++A F+ +F A+N T RL+LV A +I +GLN Sbjct: 506 TRYTIEVAKAFN------------KFYNAHNIMATEDVATKNARLKLVEATCQVIKNGLN 553 Query: 576 IIGVESPNEM 585 ++G+E +M Sbjct: 554 LLGIEVVEKM 563 >gi|315641208|ref|ZP_07896285.1| arginine--tRNA ligase [Enterococcus italicus DSM 15952] gi|315482975|gb|EFU73494.1| arginine--tRNA ligase [Enterococcus italicus DSM 15952] Length = 563 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 138/593 (23%), Positives = 255/593 (43%), Gaps = 96/593 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P+ HG ++ +L++ P IA + ++ + V+ V G +IN + Sbjct: 27 LLENPKSVDHGDVAF-PTFLLAKAFRKAPQAIAGELAEQLTSEY-VEKVEAVGP-YINFF 83 Query: 93 LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 +S + + IL +V+ YG + IG V I+ S N P+ +GH R V+G++L Sbjct: 84 MSKKTISQAILHEALVADSHYGDSSIGNHESVPIDMSSPNIAKPISMGHLRSTVIGNSLG 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ GY+ R ++ D G Q L ++ W ++A+ P +Y++ Sbjct: 144 FILEKVGYQPIRINHLGDWGTQFGKLIVAYKKWGSEEAVKAQ----PINELLRLYVEFHE 199 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 + DK L W +++ +A + K R++ LK N + + D + Sbjct: 200 RAEEDK----ALEDEARAWFKKLEESDEEAVHLWKWFREESLKEFNKIYTMLEVSFDSYN 255 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM-DRKQLLFRSTMVGDDVDRP 323 G+ + +I+ L + + E Q D+ D Q D++ Sbjct: 256 GEAFYNDKMDEIVTLLEEKHLLQE----------DQGADIVDLSQY---------DLNPA 296 Query: 324 LL-KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370 L+ KSDG+ Y D+A Y K Y+ F +YV+G++ + + K+L+AV Sbjct: 297 LIRKSDGATLYITRDMAAALYRKRTYQ--FAKSLYVVGNEQTYHFKQLKAVLKEMGFEWS 354 Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 +S +K +I VLL E++ +++++ V + Sbjct: 355 DDMYHVPFGLITKDGKKLSTRKGKI-VLLEEVLNEAVASAQQQIAEKNPSLANKEEVAKQ 413 Query: 417 VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIF- 472 VG +V F L KN L +FDF V+ + + P YVQY +AR SI +A F Sbjct: 414 VGIGAVVFHDL--KNDRLNNFDFTLEEVVRFEGETGP--YVQYTHARAMSILTKAAFTFN 469 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 PD + L D + +++ + YP V++ A EP +A + L+ F Sbjct: 470 PDATYALA-----------DDASWEVVKLIQAYPDVVQAAADKYEPSVIAKHAIKLSQAF 518 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++++ + + + K + RL LV AVA ++ L ++G+ +P +M Sbjct: 519 NKYYAN------TKVLAEDGEKDS--RLALVKAVAILLKEDLRLLGLHAPEKM 563 >gi|325103508|ref|YP_004273162.1| arginyl-tRNA synthetase [Pedobacter saltans DSM 12145] gi|324972356|gb|ADY51340.1| arginyl-tRNA synthetase [Pedobacter saltans DSM 12145] Length = 590 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 136/630 (21%), Positives = 251/630 (39%), Gaps = 138/630 (21%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 +I +E+ + GH T R P A+++ +K + F KGF+N Sbjct: 24 QITLEQTKKEFEGH-QTLVVFPFVRQTKKSPEQTAQILGEYLKENYKEIESFNVIKGFLN 82 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + S ++ + + +S ++ + + G KV +E+ S N P+H+GH R ++G ++ Sbjct: 83 IVYSDAFWLNVFQT-EISADDFAQ-MPFNGEKVMVEYSSPNTNKPLHLGHIRNNLLGFSV 140 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE----------GY 200 A L+ SGY+V + +ND G I L+ W Q N ++ PE G Sbjct: 141 AELLKASGYQVIKANLVNDRGIHICKSMLA--W---QKFGNGET--PESSGLKGDHLVGK 193 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM--------KIIR------ 246 Y ++ K KE+ + +K P++K+ QAM+ ++I+ Sbjct: 194 YYVIFDKEYKKEIEGLKAQGKTEEEAKKEAPLIKE--AQAMLLKWEQGDQEVIQLWKTMN 251 Query: 247 --------DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + K L + D F E D + +DI++ +G ++ K Sbjct: 252 SWVYAGFEETYKELGVNFDKFYYESDTYLLG----KDIVEEGLAKGVFFK------KEDN 301 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVM 356 + D+ D +D L+ + DG+ Y DL + KY E G D IYV+ Sbjct: 302 SVWIDLTE-----------DGLDEKLVRRGDGTSVYITQDLGTAQLKYDEFGVDRSIYVV 350 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM-----------PIKMSKRAG 405 G++ + K L ++L +L + + DG+ KM R G Sbjct: 351 GNEQDYHFKVL--------------FLILKKLGKTWADGLYHLSYGMVDLPSGKMKSREG 396 Query: 406 DFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLD 436 + +++E +G ++++ +L + + L Sbjct: 397 TVVDADDLIEEMRVTAKEKTEALGKVDHFDDEEKEKLYHMIGMGALKYFLLKVEPKKRLL 456 Query: 437 FDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495 FD + + Q P ++QY++AR +S+ +A +D + + E + +E Sbjct: 457 FDPKESIDFQGNTGP--FIQYSHARIKSVLNKA-------GYDNQNISTVNPE-KLQETE 506 Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555 L+LI L+ YP V+ A P +A Y YDLA ++ + ++ + L Sbjct: 507 LELIQVLSRYPSVLNAAARDFNPGAIANYTYDLAKAYNKFYQSE------TILKVEDADL 560 Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL+L + A I + ++G+E P M Sbjct: 561 KTFRLKLSYHTADTIRKAMALLGIEVPERM 590 >gi|317476441|ref|ZP_07935690.1| arginyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA] gi|316907467|gb|EFV29172.1| arginyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA] Length = 605 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 143/633 (22%), Positives = 259/633 (40%), Gaps = 132/633 (20%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 ++ +++ + GHL+ L R P A+ I ++ + S F KGF+N Sbjct: 27 QVQLQKTKKEFEGHLTLVVFPFL-RMSKKGPEQTAQEIGEYLQANEPSVSTFNVIKGFLN 85 Query: 91 LYLSPSYLRKILSSIVVSGIEYGR-NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 L ++ S ++L+ I +YG + K V IE+ S N P+H+GH R ++G+ Sbjct: 86 LTIASSAWIELLNGIHADA-QYGVVSATDKSPLVMIEYSSPNTNKPLHLGHVRNNLLGNA 144 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE----------G 199 LA+++A +G +V + +ND G I L+ W L + + PE G Sbjct: 145 LANIIAANGNKVVKTNIVNDRGIHICKSMLA--W-----LKYGNGETPETSGKKGDHLIG 197 Query: 200 YYPGVYLKHVG---KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD--------- 247 Y + KH KEL K+ E L+ E K K S +MK R+ Sbjct: 198 DYYVAFDKHYKAEVKELMAKFQGEGLSEEEAK----AKAESESPLMKEAREMLVKWEAND 253 Query: 248 -DLKAL--NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-EGILPPPKSKTTQKCD 303 +++AL + +++ D+ +R + D + + Y EG K K + + Sbjct: 254 PEVRALWKKMNDWVYVGFDETYR----MMGVTFDKIYYESETYLEG-----KEKVMEGLE 304 Query: 304 MDRKQLLFR-------STMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354 K +R + + G+ +D + LL++DG+ Y D+ K ++ + D MIY Sbjct: 305 ---KGFFYRKEDGSVWADLTGEGLDHKLLLRADGTSVYMTQDIGTAKLRFADFPIDKMIY 361 Query: 355 VMGSDHS--------------------------GYVKRLEAVAAAVSEKKAQINVLLCEL 388 V+G++ + G V+ E + + L+ E+ Sbjct: 362 VVGNEQNYHFQVLSILLDKLGFDWGKGLVHFSYGMVELPEGKMKSREGTVVDADDLMAEM 421 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDE--------VGSDSVRFMML---WRKN-----S 432 + ++ +G+ L + E VG ++++ +L RKN Sbjct: 422 INTAKE--------TSGELGKLDGLTQEEADNIARIVGLGALKYFILKVDARKNMTFNPK 473 Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492 E +DF+ N ++QY YAR +S+ R+AK+ + L P E Sbjct: 474 ESIDFN---------GNTGPFIQYTYARIQSVLRKAKEAGITVPAQL------PSGIELS 518 Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552 E LI +A++ V++ A P +A Y YDL ++ + ++ N Sbjct: 519 EKEEGLIQMIADFATVVKQAGEDYSPSLIANYTYDLVKEYNQFYHD------FSILREEN 572 Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + RL L VA ++ G+ ++G+E P+ M Sbjct: 573 EAVKIFRLALSENVAKVVRLGMGLLGIEVPDRM 605 >gi|229917757|ref|YP_002886403.1| arginyl-tRNA synthetase [Exiguobacterium sp. AT1b] gi|259511646|sp|C4L0Z5|SYR_EXISA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|229469186|gb|ACQ70958.1| arginyl-tRNA synthetase [Exiguobacterium sp. AT1b] Length = 560 Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 144/595 (24%), Positives = 253/595 (42%), Gaps = 85/595 (14%) Query: 25 EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82 E+ +D+I +IE+P+ AHG L+ L++ P+ IA I + D V Sbjct: 17 EELTIDQIEALIEKPKHEAHGDLAF-PCFQLAKAYRKAPVMIATDIANELN-DELFTKVE 74 Query: 83 IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 AG ++N++LS + K I+++++ EY + T V +F S N P +GH Sbjct: 75 AAGP-YVNVFLSRDVVSKEIINTVLEEKSEYATHEARNETIVT-DFSSPNIAKPFSMGHL 132 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGY 200 R V+G+ + + +GY+V ++ D G Q L ++ W ++A+ N P Sbjct: 133 RSTVIGNAINQIARKNGYDVVGVNHLGDWGTQFGKLMVAYKKWGDEEAVRAN----PIAE 188 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHD 257 +Y+ H +E K EL + W ++D +A + + RD+ LK +D Sbjct: 189 LLKLYV-HFHEEA--KTQPELED-EGRAWFKKLEDGDAEATELWQWFRDESLKEFQKVYD 244 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 + + + G+ D + R + E +S+ ++ + L Sbjct: 245 LLGVKFESFNGEAF----YNDKMGRVVEMLEAKNLLVESEGAMVVSLEEENL-------- 292 Query: 318 DDVDRPLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---- 370 P L K DG+ Y DLA +YE F YV+G + + + K+L +V Sbjct: 293 ----PPCLIKKKDGATLYATRDLAAAIYRYETYNFVQANYVVGGEQALHFKQLFSVLRKL 348 Query: 371 -------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 +S +K +I VLL E+++ + + ++ D + Sbjct: 349 GYDFVDGMHHVPFGLILQEGKKMSTRKGRI-VLLEEVLKEAIEKAQANIEQKNPDLANAQ 407 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 V VG +V F L + ++FD +K + + P YVQY AR S+ R+ Sbjct: 408 DVARMVGVGAVVFHDLKNERINNIEFDLDSMLKFEGETGP--YVQYTNARANSLLRKG-- 463 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 ++D P D ++ L +P VI A +EP ++ Y+ DLA Sbjct: 464 -----NYDGSPFT-----GADDDYSWGVVTMLNAFPHVITRAHERREPSIISRYVLDLAQ 513 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ ++ H +R ++ + K + RL LV AV ++ GL ++GVE+P EM Sbjct: 514 AFNKYYGH------VRVLEEDAGKQS--RLALVKAVTLVLTEGLRLLGVEAPEEM 560 >gi|149244104|ref|XP_001526595.1| arginyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239] gi|146448989|gb|EDK43245.1| arginyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239] Length = 672 Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 130/551 (23%), Positives = 223/551 (40%), Gaps = 90/551 (16%) Query: 88 FINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 FI + + S + ++ ++ EYG +G G K +EF S N P H GH R ++ Sbjct: 159 FIQFFFNRSLVYDLVIKDVLKRKTEYGYLPLGVGKKAIVEFSSPNIAKPFHAGHLRSTII 218 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGV 204 G +++L G+EV R Y+ D G Q LA+ F +Y ++ L + P + V Sbjct: 219 GGFISNLYEKLGWEVVRINYLGDWGKQFGLLAVG-FEKYGSEEQLAKD----PINHLFEV 273 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA----------MMKIIRDDLKALNI 254 Y+K V ++ ++ +SE P + VQA ++ D AL I Sbjct: 274 YVK-VNNDVREE-ASEATGEPAVADAADADEKKVQASSTNEKARQFFRRMEDGDESALKI 331 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-----EGILPPPKSKTTQK-------C 302 + R I ID AR Y E +P K K K Sbjct: 332 ----------WRRFRDLSIDKYIDTYARLNIKYDYYSGESQVPQEKMKEATKLFEDKGLV 381 Query: 303 DMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH 360 +DR L T + + L+ KSDG+ Y D+ +YE FD MIYV+ S Sbjct: 382 HVDRGAKLIDLTKFNKKLGKALVEKSDGTSLYLTRDVGEAIKRYETYKFDKMIYVIASQQ 441 Query: 361 S---------------GYVKRLE----AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401 + K LE + +S +K + V L +++ ++ M M Sbjct: 442 DLHCQQFFEILKQMGFEWAKNLEHINFGMVQGMSTRKGNV-VFLDNILQETKEKMHDVMK 500 Query: 402 KRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF-YVQYA 457 K A + + + + VG +V M+ ++ +L+++F + S E Y+QYA Sbjct: 501 KNADKYAQIEEPDKIAELVGISAV--MIQDFQSKRILNYEFKWDRMTSFEGDTGPYLQYA 558 Query: 458 YARCRSIFRQA---KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514 ++R S+ R++ ++ + +FDL + L+ L +YP +I A+ Sbjct: 559 HSRLSSMQRKSDISEEELENANFDLLT----------EPCAANLVRTLLQYPDIIRRASH 608 Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 EP + YL+ L + + + +V R++ RL L A +I +G+ Sbjct: 609 NNEPSTIVTYLFTLCHIVSQCYD-------ILWVAGQEREVATARLALYAATKQVIYNGM 661 Query: 575 NIIGVESPNEM 585 ++G+ M Sbjct: 662 TLLGLTPVERM 672 >gi|194098399|ref|YP_002001457.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945] gi|239998805|ref|ZP_04718729.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae 35/02] gi|240014279|ref|ZP_04721192.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae DGI18] gi|240016715|ref|ZP_04723255.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae FA6140] gi|240115482|ref|ZP_04729544.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID18] gi|240121842|ref|ZP_04734804.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1] gi|240125580|ref|ZP_04738466.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679] gi|254493590|ref|ZP_05106761.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae 1291] gi|268594648|ref|ZP_06128815.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae 35/02] gi|268601156|ref|ZP_06135323.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID18] gi|268684169|ref|ZP_06151031.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679] gi|293399211|ref|ZP_06643376.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae F62] gi|238690193|sp|B4RL22|SYR_NEIG2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|193933689|gb|ACF29513.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945] gi|226512630|gb|EEH61975.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae 1291] gi|268548037|gb|EEZ43455.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae 35/02] gi|268585287|gb|EEZ49963.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae PID18] gi|268624453|gb|EEZ56853.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679] gi|291610625|gb|EFF39735.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae F62] gi|317164093|gb|ADV07634.1| arginyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107] Length = 572 Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 126/590 (21%), Positives = 241/590 (40%), Gaps = 88/590 (14%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L +L + + + ++ +G + V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRHEFLAQNIHA-ALNDARFGVAKTAQPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ F+G V R+ ++ D G Q L V + +Q N +L Sbjct: 144 RVLEFTGNTVIRQNHVGDWGTQFGML---VAYLVEQQKDNAAFELA-------------- 186 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 +L Y + + F E+ P D + + ++K+ D L + D Sbjct: 187 DLEQFYRAAKVRFDED---PAFADTAREYVVKLQGGDETVLALWKQFV----DISLSHAQ 239 Query: 272 PIRDIIDNLARQGYV-----YEGILPPPKSKTTQK---CDMDRKQLLFRSTMV---GDDV 320 + D + R V Y L P QK + D +++F G+ Sbjct: 240 AVYDTLGLKLRPEDVAGESKYNDDLQPVADDLVQKGLAVEDDGAKVVFLDEFKNKEGEPA 299 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEK 377 + K G + Y + DLA + + R ++YV+ + + ++L + A + Sbjct: 300 AFIVQKQGGGFLYASTDLACLRYRIGRLKAGRLLYVVDHRQALHFEQLFTTSRKAGYLPE 359 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416 A+ + + + +DG P K R+GD + L ++ E Sbjct: 360 NAKAEFIGFGTM-MGKDGKPFKT--RSGDTVKLVDLLTEAVERATALVKEKNPELGADEA 416 Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 VG +V++ L + + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 417 AKIGKTVGIGAVKYADLSKNRTSDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG- 474 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 ++D V+ + E QL L ++ V+++ P+ LA YLY A+ Sbjct: 475 -----EWDATAPTVLTE-----PLEKQLAAELLKFENVLQSVADTAYPHYLAAYLYQAAT 524 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 +F + P L+ A+ RLQL + + GL+++G++ Sbjct: 525 LFSRFY---EACPILKAEGASRNS----RLQLAKLTGNTLKQGLDLLGID 567 >gi|254519810|ref|ZP_05131866.1| arginyl-tRNA synthetase [Clostridium sp. 7_2_43FAA] gi|226913559|gb|EEH98760.1| arginyl-tRNA synthetase [Clostridium sp. 7_2_43FAA] Length = 563 Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 131/574 (22%), Positives = 236/574 (41%), Gaps = 95/574 (16%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIE 111 L++ P I+E + KID D I ++N + S + + + ++ G E Sbjct: 44 LAKTFRKAPNMISEELAG--KIDNDGFEKIINVGPYVNFFADKSVFTKNTIEKVLAEGDE 101 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG + +G+G + +E+ S N P HVGH +G++L + GY V ++ D G Sbjct: 102 YGSSNVGEGKTICVEYSSPNIAKPFHVGHLFTTAIGNSLYKIFKKEGYTVEGINHLGDWG 161 Query: 172 AQINTLALSVF--WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229 Q L +S + W ++AL N D +Y+K + D LL + Sbjct: 162 TQFGKL-ISAYKRWGNEEALEKNAID----ELLRIYVKFHDEAEKDP----LLEDEGRAY 212 Query: 230 LPIVK--DYSVQAMMKIIRD-DLKALNIQHDIFISEDDFHRGDP--SPIRDIIDNLARQG 284 ++ D V+A+ K RD LK ++IF + D + G+ + D++ N Sbjct: 213 FKALEDGDKEVEALWKRFRDLSLKEFERIYEIFDVKFDSYAGEAFYNDKMDVVVN----- 267 Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRP---LLKSDGSYTYFAAD 337 ++ K LL S ++ D+ + P +LK DG+ Y D Sbjct: 268 ------------------ELKEKNLLVESNGAQVVMLDEYNMPPCIVLKGDGASIYATRD 309 Query: 338 LA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA---------------------- 372 LA Y K KY+ F IYV+G+ + + K++ V Sbjct: 310 LAAAMYRKKKYD--FYKSIYVVGTPQALHFKQVFKVLELAGHEWAKDCVHVGFGLVKFAD 367 Query: 373 -AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431 +S +K ++ +LL +L++ D ++++ + V ++G +V F L Sbjct: 368 RKLSTRKGEV-ILLDDLIKESIDKTLEVINEKNPNLDNKEEVAKKIGVGAVVFTYLKNSR 426 Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491 + + FD+ ++ E YVQY+YAR SI +A + + D+ Sbjct: 427 EKDIVFDWKEMLSFDGETGP-YVQYSYARANSILTRAGGLKGNADYSKLSSK-------- 477 Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551 E +L+ L + + I AT EP + Y ++A F+ ++ + Sbjct: 478 --EEFELVKALEGFAKQIHLATEKLEPSIVTRYAIEVAKSFNKFYNAH------SVLNLE 529 Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +L RL LV A +I + L ++G+E ++M Sbjct: 530 DEELKEARLSLVKATCQVIKNSLALLGIEVVDKM 563 >gi|147673730|ref|YP_001217600.1| arginyl-tRNA synthetase [Vibrio cholerae O395] gi|146315613|gb|ABQ20152.1| arginyl-tRNA synthetase [Vibrio cholerae O395] gi|227013971|gb|ACP10181.1| arginyl-tRNA synthetase [Vibrio cholerae O395] Length = 599 Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 134/620 (21%), Positives = 235/620 (37%), Gaps = 136/620 (21%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ LG +P A+ ++ + ++ IAG GFIN++ Sbjct: 49 LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLEGIASKTEIAGPGFINIF 108 Query: 93 LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 LS +L + + G+ E +N++ ++ + N MHVGH R ++G Sbjct: 109 LSEEFLAAQAEAALADARLGVAQEAPKNIVA-------DYSAPNVAKEMHVGHLRSTIIG 161 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188 D + + F G++V R +I D G Q L L F+R + Sbjct: 162 DAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKK 221 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245 LY+ D E A Y +L F E W +V +Q Sbjct: 222 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ------ 261 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---C 302 ++ ++ R + S R+ + + +Y +LP S K Sbjct: 262 ---------------NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAV 302 Query: 303 DMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358 + D Q++F G+ + + K DG + Y D+A K +YE G D ++Y + S Sbjct: 303 EDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDS 362 Query: 359 DHSGYVKRLEAVAAAVSEKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHV 413 ++ + A + K I NV L + L +DG P K RAG + L + Sbjct: 363 RQHQHLMQ----AWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADL 416 Query: 414 VDEVGSDSVRFMMLWRKNSEL-----------LDFDFCKVKEQSKE-------------- 448 +DE + ++ KN EL + K + SK Sbjct: 417 LDEAQERAK--ALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLA 474 Query: 449 ---NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 N Y+QYAY R S+F +A +D + ++ E + E LI L ++ Sbjct: 475 FEGNTAPYMQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQF 525 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 +++ +P+ + YL++LA +F + + A + RL+L Sbjct: 526 EEAVQSVAREGQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESIKQSRLKLAAL 579 Query: 566 VASIINSGLNIIGVESPNEM 585 A I GL ++G+++ M Sbjct: 580 TAKTIKQGLALLGIDTLERM 599 >gi|228933503|ref|ZP_04096356.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826232|gb|EEM72012.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 562 Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 136/621 (21%), Positives = 256/621 (41%), Gaps = 101/621 (16%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ ++ L I +++ILD +IE P+ G + L++ P IA Sbjct: 2 DYKTQFAESLSNIFTNELTQQQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V G ++N++ + + +L +I+ EYG+N G V Sbjct: 59 KEVAEKLS-DPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNYFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA------ 178 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKW 176 Query: 179 --------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN- 223 ++ ++ + + +++ EG + K + E D+ + EL N Sbjct: 177 GNEAVVKEDPIRELFKLYVQFHEEVKDDEELEEEGR---AWFKKL--EEGDEEAVELWNW 231 Query: 224 FPEEKWLPIVKDYSV----------QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273 F E + Y + +A + +D + +HD+ + Sbjct: 232 FRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEESEG--------- 282 Query: 274 RDIIDNLARQGYVYEGILPP----PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 +I NL +G +PP T D L+R G D ++ + Sbjct: 283 -ALIVNLEEEG------MPPCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQ 335 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHS--GYVKRLEAVAAAVSEKKAQINVLLCE 387 S + +F + G++ +V G +H G++ + +S +K ++ +LL E Sbjct: 336 SLHF----NQFFTVLKKLGYN---WVDGMEHVPFGFILK---DGKKMSTRKGRV-ILLEE 384 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKE 444 ++ + + ++ + V +VG+ +V F L KN + + +F +K Sbjct: 385 VLEEAIELAKQNIEEKNPNLKQKEEVAKQVGAGAVIFHDL--KNERMHNIEFSLENMLKF 442 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 + + P YVQY +AR SI R+ F F L D ++ L + Sbjct: 443 EGETGP--YVQYTHARACSILRKESVEFETCTFAL-----------KDDHSWSVVKLLNK 489 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 +P+VIE A EP ++ Y+ D+A F+ ++ + +R ++ + K + RL LV+ Sbjct: 490 FPQVIEIAFNKNEPSVISKYVLDVAQSFNKYYGN------VRILEESEEKDS--RLALVY 541 Query: 565 AVASIINSGLNIIGVESPNEM 585 AV ++ GL ++G+E+P EM Sbjct: 542 AVTVVLKEGLRLLGMEAPEEM 562 >gi|291294729|ref|YP_003506127.1| arginyl-tRNA synthetase [Meiothermus ruber DSM 1279] gi|290469688|gb|ADD27107.1| arginyl-tRNA synthetase [Meiothermus ruber DSM 1279] Length = 613 Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 147/624 (23%), Positives = 255/624 (40%), Gaps = 112/624 (17%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V E P D G T AM L+R L P IA ++ I++ V F+ G G++N Sbjct: 32 VVQETPPD-KEGDYGTPVAMSLARTLRKAPPQIAADLLQNIQLPAWVRRTFVLG-GYLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P++L K + V KV +E S NP +HVGH R +GD+LA Sbjct: 90 ELDPAFLVKSATLPVAP-------FPKVAGKVLLEHTSVNPNKELHVGHLRNICLGDSLA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQ-INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ F G +V YI+D G Q +L ++ ++A D ++ G + Sbjct: 143 RILRFVGRDVEVMNYIDDTGRQAAESLYALQYFGLKEAPAQTKYD----HWVGEAYVRLH 198 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQ-AMMKIIRDDLKA---LNIQHDIFISEDDFH 266 + + D + + L ++ ++ A+ KI+R L+ L +++ + E D Sbjct: 199 QAMEDPEQKARIEQGVQSTLHRLEAGELRDAVDKILRAQLQTMYRLGAEYNALVWESDI- 257 Query: 267 RGDPSPIRDIIDNLARQGYVYEG---ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323 +R+ + L + + EG + P + K MD + ++ P Sbjct: 258 ------VREGL--LGKAMKILEGSPYVSRPTEGKYAGALVMDTSAFI-------PGLEDP 302 Query: 324 ---LLKSDGSYTYFAADLA--YFKCKYERGFDNMIY-VMGSDHSGYVKRLEAVAAAVSEK 377 L++S+G+ TY A D+A ++K G + Y S Y E V Sbjct: 303 YLVLIRSNGTSTYTAKDIALQFWKMGLLEGLRFVTYDTQPSGAPLYSTHPEGVPLPFGGA 362 Query: 378 KAQINVLLCELVRLYR--------DGMP------------------IKMSKRAGDFITLR 411 INV+ R +G P +MS R G +++ Sbjct: 363 SETINVVDARQSHALRVVQASLEVEGRPDLAEKCFHLAYETVLLEGRQMSGRKGIVVSVD 422 Query: 412 HVVDE-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE-Q 445 V+DE +G +VRF ML + + +DF + + + Sbjct: 423 EVMDEAVKRVRAVIAEKNPDHPSPAEAAEQIGVGAVRFAMLKTEAKKQIDFRYDQALSFE 482 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS---ELQLIVHL 502 P Y+QYAYAR SI R+A++ + VI + +F + E+ L L Sbjct: 483 GDTGP--YIQYAYARAGSILRKAEE-----------QGVIQEAPDFTQATPYEVALAKTL 529 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR-LRFVQANNRKLTMMRLQ 561 +P +++A + P+ +A YL +LA+ + ++ + R V + +L +RL+ Sbjct: 530 LRFPEAVQDAARNKAPHIVAQYLLELAAAWSSFYNAKTPDGRPATPVLSAPPELRGVRLE 589 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 LV A+ + GL ++G+E+P M Sbjct: 590 LVKALRQTLKQGLGLLGLEAPEVM 613 >gi|13431882|sp|P57851|SYR_PASMU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|12720817|gb|AAK02635.1| ArgS [Pasteurella multocida subsp. multocida str. Pm70] Length = 563 Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 140/600 (23%), Positives = 245/600 (40%), Gaps = 116/600 (19%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LG +P A+ ++ ++ + + + IAG GFINL+L ++L + + Sbjct: 23 GDYQANGIMAAAKKLGRNPREFAQQVIEQLDLSEIAEKIEIAGPGFINLFLDKNWLAEQI 82 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 S + V+ + G T V ++ S N MHVGH R ++GD + + F G +V Sbjct: 83 S-LAVNDDKLGIQATETQTVV-ADYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVI 140 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND------SDLPEGYYPGVYLKHVGKELADK 216 R ++ D G Q L Y + + N SDL E +Y + + Sbjct: 141 RANHVGDWGTQFGMLIA-----YLEKVENESASEMELSDL-EAFY---------RAAKEH 185 Query: 217 YSSELLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNIQH-----DIFISEDDFHR 267 Y S+ + F E+ +VK D + M K + D N QH ++ ++E D Sbjct: 186 YDSDPV-FAEKARNYVVKLQSGDEYCRTMWKKLVDITMQQN-QHNYDRLNVTLTEKDVM- 242 Query: 268 GDP--SP-IRDIIDNLARQGYVYEG------ILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 G+ +P + DI+ +L +QG E L K+K G+ Sbjct: 243 GESLYNPMLSDIVADLKQQGLAVEDEGAFVVYLDEFKNKE------------------GE 284 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 + + K DG + Y D+A K +YE D + + S ++++ A ++ K Sbjct: 285 PMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQHMQQ----AWLITRK 340 Query: 378 KAQI-NVLLCEL----VRLYRDGMPIKMSKRAGDFITLRHVVDE---------------- 416 + + E + L +DG P K R G + L ++DE Sbjct: 341 AGYVPDSFQLEHKNFGMMLGKDGKPFKT--RTGGTVKLADLLDEAVERATQLIQEKSTAL 398 Query: 417 -----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 V SV++ L + + FD+ + + N Y+QYAY R RSIF Sbjct: 399 SAQEKAAVIEAVAIGSVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIF 457 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 +++ + D P V+ E E L + L ++ I+ P+ L YL Sbjct: 458 NRSE--LNEQDLSESPV-VLSNE-----KERLLAIKLLQFEEAIQIVAKEGTPHVLCTYL 509 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 Y+LA VF + H + + ++ RL+L + GL+++G+++ ++M Sbjct: 510 YELAGVFSSFYEH------CPILNNEDEQIKRSRLKLALLTEKTLKQGLDLLGIKTVDKM 563 >gi|170756017|ref|YP_001780705.1| arginyl-tRNA synthetase [Clostridium botulinum B1 str. Okra] gi|229558755|sp|B1IIE6|SYR_CLOBK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|169121229|gb|ACA45065.1| arginyl-tRNA synthetase [Clostridium botulinum B1 str. Okra] Length = 563 Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 134/576 (23%), Positives = 249/576 (43%), Gaps = 99/576 (17%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIE 111 L++ P IAE + +I + + V G ++N ++ + L K +L ++ + Sbjct: 44 LAKTFRKAPNLIAEELKEKINKEG-FEKVVTVGP-YLNFFVDKTILIKDVLEKVLSEKEK 101 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG + +G+G V +E+ S N P H+GH +G+ L +++F GY ++ D G Sbjct: 102 YGSSKVGEGKNVVVEYSSPNIAKPFHIGHLFTTAIGNALYKILSFEGYNCIGINHLGDWG 161 Query: 172 AQINTLALSVF--WRYQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSEL-LNFPEE 227 Q L +S + W ++AL + G +Y+K H E + E LNF Sbjct: 162 TQFGKL-ISAYRRWVDEEALEKD----AIGELLRIYVKFHEEAEKDPELEKEARLNF--- 213 Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287 K L + + + LK N +D+ + D G+ S D +D + ++ Sbjct: 214 KRLEDGSEEETELWNRFKDLSLKEFNKVYDMLGIKFDSLAGE-SFYSDKMDAVVQE---- 268 Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRP---LLKSDGSYTYFAADLA- 339 +D K LL S ++ D+ + P + KSDG+ Y DLA Sbjct: 269 ----------------IDDKGLLVDSNGAKVVMLDEYNMPPCMIKKSDGATIYATRDLAA 312 Query: 340 --YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGM 396 Y K Y+ F IYV+G+ + + K++ + A + LV+L Sbjct: 313 AIYRKKTYD--FHKCIYVVGTPQALHFKQVFTTLKLMGHDWADDCKHVGFGLVKLANK-- 368 Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD------------FCKVKE 444 K+S R GD + L ++++ ++++ ++ KN L + + F +K Sbjct: 369 --KLSTRNGDVVFLEDLLNQSVEETLK--IINEKNPNLKNKEDVAKKLGIGAVVFTYLKN 424 Query: 445 QSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490 + + VF YV+Y+YAR +SI R+A ++ + D+ + + + E Sbjct: 425 NRERDIVFDWKEILSFDGETGPYVEYSYARGKSILRKAGELTGEADY-----SKLSSKEE 479 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-SHGRENPRLRFVQ 549 F+ ++L L + I NA EP + Y+ ++A F+ + +HG + Sbjct: 480 FELAKL-----LGGFNDAIMNAIDKLEPAMVTRYIIEVAKAFNKFYNAHG-------ILN 527 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A + + + R++LV A +I + LN++G++ EM Sbjct: 528 AEDNDVKLARVKLVEATCQVIKNALNLLGIDVVEEM 563 >gi|187918455|ref|YP_001884018.1| arginyl-tRNA synthetase [Borrelia hermsii DAH] gi|238689294|sp|B2S0U2|SYR_BORHD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|119861303|gb|AAX17098.1| arginyl-tRNA synthetase [Borrelia hermsii DAH] Length = 584 Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 145/595 (24%), Positives = 257/595 (43%), Gaps = 96/595 (16%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG-FIN 90 I++++P G LS S+ L L+ I E I+ +I D G ++N Sbjct: 33 IIMQKPPKSELGDLSI-LIFEFSKILKLNTSIITEEIIKQIG-----DKYATKAMGPYLN 86 Query: 91 LYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 + + Y++ + + +YG N + K ++ IEF S N P+H+GH R ++G++ Sbjct: 87 IKFNRKEYIKDTIKKVNEQKEKYGINNVLKNKRIIIEFSSPNTNKPLHIGHLRNDIIGES 146 Query: 150 LASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRY---QQALYNNDSDLPEGYYP-G 203 L+ ++ SG +VT+ IND G I + LA F + +L D + + Y Sbjct: 147 LSRILKASGAQVTKINLINDRGTHICKSMLAYKKFGNNTTPELSLKKGDHLIGDFYVKYN 206 Query: 204 VYLKHVGKELADKYSSELLNFPE---EKWLPIVKDYSVQAMMKIIRDDLKALNIQHD-IF 259 Y K+ E+A+ +LL E EK + + K + Q ++ I+ K NI D I+ Sbjct: 207 EYAKN--NEMAEDEIQQLLCKWEEGDEKTVQLWKKLN-QWAIEGIKATYKLTNITFDKIY 263 Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEG-----ILPPPKSKTTQKCDMDRKQLLFRST 314 + + F G R+II +G Y+ + P T+K ++ +Q F+ Sbjct: 264 LESEIFKIG-----REIILKGLEEGLCYKREDGAICIDIP----TEKNEISEQQ--FKQ- 311 Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKC-KYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373 + LL+++G+ Y DL K E FD MIYV+GS+ + K L VA Sbjct: 312 -------KVLLRANGTSIYLTQDLGNIVTRKNEFDFDEMIYVVGSEQIHHFKTLFYVANK 364 Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433 + K V L + +G KM R G+ I +++ ++ S+S+ + + ++NS+ Sbjct: 365 LGITKENNLVHLSYGMVNLPEG---KMKSREGNVIDADNLIHDL-SESI-ILEIKKRNSD 419 Query: 434 LLDF-----------------------DFCKVKEQS---KENPVFYVQYAYARCRSIFRQ 467 D+ D KE+S N Y+QY AR SI + Sbjct: 420 KKDYQEIALNISLGAIHYYLLKTAIHKDILFNKEESLSFTGNSGPYIQYVGARINSILEK 479 Query: 468 AKDI---FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 ++ ++FDL + +E ++I ++E+ I A+ + P +A Y Sbjct: 480 YDELNLSNETINFDLL----------VNENEWEIIKIISEFEEHIIKASKDRNPSVIANY 529 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 Y LA F ++ + + N +LT R+ L AV I + ++++ + Sbjct: 530 SYLLAKSFSTYYQDT------KIIDKNKPELTHARIDLSKAVLQTIKNCMHLLNI 578 >gi|318040673|ref|ZP_07972629.1| arginyl-tRNA synthetase [Synechococcus sp. CB0101] Length = 597 Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 136/545 (24%), Positives = 218/545 (40%), Gaps = 89/545 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98 G N A+ L++PLG P IA +V ++K P + IAG GFINL L P L Sbjct: 43 GDFQANGALPLAKPLGQPPRAIATAVVEQLKAYPSFAELCLEPQIAGPGFINLTLRPERL 102 Query: 99 RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158 + + + G + G+ V ++F S N MHVGH R ++GD+LA ++ F G Sbjct: 103 AAEVQA-CLQDQRLGVPAVQGGSPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRG 161 Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKY 217 + V R ++ D G Q L + +AL D+ DL +L Y Sbjct: 162 HPVLRLNHVGDWGTQFGMLITHLKQVAPEALDTADAVDL--------------GDLVAFY 207 Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277 F +++ V + LKA + D S +F + I D + Sbjct: 208 REAKKRFDDDEAFQTTSREEVVKLQGGDPVSLKAWGLLCD--QSRREFQK-----IYDRL 260 Query: 278 D-NLARQGYVY-----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL----LKS 327 D L+ +G + EG++ ++ D D + +F + G D +PL KS Sbjct: 261 DIRLSERGESFYNPYLEGVVADLEATGLLVVD-DGARCVFLEGVSGKD-GKPLPVIVQKS 318 Query: 328 DGSYTYFAADLAYFKCKYERGFDN-----MIYVMGSDHSGYVKRLEAVA--AAVSEKKAQ 380 DG + Y DLA + ++ D +IYV + + + + VA A + + Sbjct: 319 DGGFNYATTDLAAIRYRFGAAPDGDGARRVIYVTDAGQANHFAGVFQVARRAGWVPEDGR 378 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416 + + LV+ DG K+ RAGD + LR ++DE Sbjct: 379 LEHVPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVERAEADLRRRLEEEGRQEEEAF 435 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 VG +V++ L + F F ++ + N Y+ YA R I R+ Sbjct: 436 IQQVATTVGLAAVKYADLSQNRITNYQFSFDRML-ALQGNTAPYLLYAVVRIAGIARKGG 494 Query: 470 DIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 DL+ P I Q F + E L+ L ++ VI P +L YL++L Sbjct: 495 ----DLEGSSVP---IDQPLSFHEPQEWALVRELLKFDAVIAEVEEELLPNRLCTYLFEL 547 Query: 529 ASVFH 533 + VF+ Sbjct: 548 SQVFN 552 >gi|317506285|ref|ZP_07964100.1| arginyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974] gi|316255422|gb|EFV14677.1| arginyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974] Length = 589 Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 134/599 (22%), Positives = 227/599 (37%), Gaps = 98/599 (16%) Query: 38 RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 R H N + L++ L +P +A +VA++ P V +G GF+NL + + Sbjct: 38 RPSEHADYQANGLLALAKKLKGNPRELAGKVVAQLDGSPLFAHVEASGPGFVNLTFADTA 97 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 L L++ S + G +++ + N MHVGH R ++GD L L+ FS Sbjct: 98 LAGQLAA-RGSDPKLGLGKAASRPVTVVDYSAPNIAKEMHVGHLRSTIIGDALVRLLTFS 156 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE-----GYYPGVYLK-HVGK 211 G EV R+ ++ D G Q L + A D D P Y + + + Sbjct: 157 GSEVIRQNHVGDWGTQFGMLIEHLLENPDVAGGEEDGDTPTISRLAALYKAARARFNADE 216 Query: 212 ELADKYSSELLNF----PEE--KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 E + ++ PE W IV + + I L L DI E + Sbjct: 217 EFQTRSRQRVVALQSGDPETLAGWQEIVAES--KTYFGEIYSKLGVLLTDEDI-AGESSY 273 Query: 266 HRGDPSPIRDIIDNLARQGYVY--EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323 + ++ I D+L R+G EG L C + F + D P Sbjct: 274 N----DELQGIADDLERRGVAVRSEGAL----------C------VFFDDVVDKDGKPVP 313 Query: 324 LL--KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVK-------RLEAVAAA 373 + KSDG + Y A DLA + + + ++YV+GS + + K R + Sbjct: 314 FIIQKSDGGFGYPATDLATLRHRVRDLKAARLLYVVGSPQALHFKMVFETARRAGYLPEG 373 Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD------------------ 415 V + Q +L DG P K R G+ I L ++D Sbjct: 374 VEAEHVQFGSVLGA------DGKPFK--SREGETIRLISLLDEAVARARATIAERSPGLS 425 Query: 416 ---------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466 EVG +V++ L + FD ++ + N Y+QYA+AR RS+ Sbjct: 426 AQAQEQRAQEVGIGAVKYADLSTSRTRDYVFDLDRMLSL-QGNTGVYLQYAHARIRSMLA 484 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 + + D P + +E L+ L E+ ++ + EP++L YLY Sbjct: 485 RLAEAEAAPDGSEAP--------PLEPAERALVRTLDEFGATLDAVAESLEPHRLCAYLY 536 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA F + ++A ++ R+ + + GL+++G+ +P + Sbjct: 537 ALAQAFSDFYEA------CPVLKAPTAQIRARRVAICELTGDTLALGLSLLGIAAPERL 589 >gi|213402307|ref|XP_002171926.1| mitochondrial and cytoplasmic arginine-tRNA ligase Rrs1/Mrs1 [Schizosaccharomyces japonicus yFS275] gi|211999973|gb|EEB05633.1| mitochondrial and cytoplasmic arginine-tRNA ligase Rrs1/Mrs1 [Schizosaccharomyces japonicus yFS275] Length = 618 Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 131/550 (23%), Positives = 228/550 (41%), Gaps = 89/550 (16%) Query: 86 KGFINLYLSPSYLR-----KILSSIVVSGI-----EYGRNLIGKGTKVNIEFVSANPTGP 135 KG++N + +LR L+ +V+ I EYGRN G G IEF S N P Sbjct: 96 KGYVNCEANGIFLRFNFDGSKLTELVLPMIWSKQSEYGRNNSGNGKVAVIEFSSPNIAKP 155 Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195 H GH R ++G LA+L G++V R Y+ D G Q LA+ L+ ++ Sbjct: 156 FHAGHLRSTIIGSFLANLHESQGWKVYRINYLGDWGKQFGLLAVGF------ELHGDEEQ 209 Query: 196 L---PEGYYPGVYLK-----HVGKELADKYSSELLNFPEEKWLPI-VKDYSVQAMMKIIR 246 L P + VY+K +E D +E + P+ + D + Q ++ Sbjct: 210 LSKDPIRHLYQVYVKINADATAEQEKIDAEKAEAEAAGKPYETPVTLHDKARQFFKRMEE 269 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP---------KSK 297 D +AL + F + +++ + L + Y+G P K K Sbjct: 270 GDEEALKVW-------GRFRELSITKLQETYERLNIKYDQYDGESQVPLDLMNEALEKLK 322 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355 T + D+ LL + + + ++ KSDG+ Y D+ +Y + FD IYV Sbjct: 323 TLGLIEEDKGALLVDLSKHDKKLGKAIVQKSDGATLYLTRDIGTAIRRYNKYHFDKSIYV 382 Query: 356 MGSDHSGYVKRL----EAVAAAVSEKKAQIN--------------VLLCELVRLYRDGMP 397 + S Y +L E + ++K IN V L +++ + ++ M Sbjct: 383 VASQQDLYFAQLFKIFELMGFEWAKKCVHINYGLVQGMSTRKGKAVFLDDIMEVAKEEMH 442 Query: 398 IKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFY 453 M K + +++ V D VG +VR K FD+ ++ + P Y Sbjct: 443 KVMKKNEEKYAQIKNPEEVADIVGKTAVRIQDSTGKRVNNYVFDWSRMLSFEGDTGP--Y 500 Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513 +QYA++R S+ R+ F D +++ ++ FD L+ L++YP V++++ Sbjct: 501 LQYAHSRLCSVRRKVN--FTDEQIANADLSLLKEQDAFD-----LVRLLSQYPDVLKSSF 553 Query: 514 IAQEPYKLAFYLYDL----ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 QE + YL+ L + ++ W GRE P L + RL L A + Sbjct: 554 RFQETSTVVTYLFKLTHMVSKLYDILWVQGREEP-----------LQLARLNLFGAARLV 602 Query: 570 INSGLNIIGV 579 + +G+ ++G+ Sbjct: 603 LYNGMTLLGL 612 >gi|329942490|ref|ZP_08291300.1| arginyl-tRNA synthetase [Chlamydophila psittaci Cal10] gi|332287127|ref|YP_004422028.1| arginyl-tRNA synthetase [Chlamydophila psittaci 6BC] gi|313847723|emb|CBY16713.1| putative arginyl-tRNA synthetase [Chlamydophila psittaci RD1] gi|325506631|gb|ADZ18269.1| arginyl-tRNA synthetase [Chlamydophila psittaci 6BC] gi|328815400|gb|EGF85388.1| arginyl-tRNA synthetase [Chlamydophila psittaci Cal10] gi|328914367|gb|AEB55200.1| arginyl-tRNA synthetase [Chlamydophila psittaci 6BC] Length = 562 Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 147/589 (24%), Positives = 229/589 (38%), Gaps = 110/589 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH N AM L+R L + P IAE IV I + S+ IAG GFIN S +L L Sbjct: 38 GHYQCNDAMKLARTLKMPPRAIAESIVNHISKN-SFSSIEIAGAGFINFTFSKEFLNLSL 96 Query: 103 SSIVVSGIEYGRNL-----IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 S Y ++L + KV I+F S N MHVGH R ++GD LA + F Sbjct: 97 QS-------YSQDLSSGFRVKDPKKVVIDFSSPNIAKDMHVGHLRSTIIGDCLARIFTFV 149 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217 G +V R +I D G A + Y Q + D + E +L Y Sbjct: 150 GNDVLRLNHIGDWGT-----AFGMLITYLQEESSEDIENLE-------------DLTILY 191 Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDI 276 F E+ K S ++ + D KA + I ISE F + I +I Sbjct: 192 KKAHARFAEDAEF---KKRSQTNVVALQSGDPKARKLWERICEISERAFQK-----IYNI 243 Query: 277 ID-NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS----TMVGDDVDRPLL--KSDG 329 +D ++ ++G + P K D+++K L+ S + + PL+ KSDG Sbjct: 244 LDISIEKRGESFYNPFLPEIIK-----DLEKKNLITISDNAKCVFHEGFSIPLMVQKSDG 298 Query: 330 SYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 Y Y DLA + + E D +I V S + + LEA A A + V Sbjct: 299 GYNYATTDLAAMRYRVEHDHADKIIIVTDMGQSLHFQLLEATALAAGYLPNK-EVFSHVG 357 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDS 421 L D K R+G+ I L+ ++D +G ++ Sbjct: 358 FGLVLDSEGKKFKTRSGENIKLQELLDMAIDQAVATLKKHRPEMSEAEIAERAPVLGINA 417 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 +++ L F F K+ + + N ++ Y Y R + I R+ Sbjct: 418 IKYADLSSHRVSDYVFSFEKML-RFEGNTAMFILYGYVRIQGIKRR------------LG 464 Query: 482 RNVIPQESEFDT---SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-- 536 + ES D SE L + L +P I+ P+ L YLY L + FH + Sbjct: 465 IEKLSLESTADIQEPSEEALALALLRFPEAIDLTLKELCPHFLTDYLYMLTNKFHAFFRD 524 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H +P + RL L V + +G++++G+++ + + Sbjct: 525 CHIEGSPHQK-----------ARLYLCALVEKTLATGMHLLGLQTLDRL 562 >gi|299471588|emb|CBN79450.1| Arginyl-tRNA Synthetase [Ectocarpus siliculosus] Length = 616 Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 122/544 (22%), Positives = 217/544 (39%), Gaps = 89/544 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARI--KIDPDVDSVFIAGKGFINLYLSPSYLRK 100 G NAAM L++PL P +A + ++ ++ ++ IAG GFINL L ++ Sbjct: 63 GDYQCNAAMALAKPLKCKPRDVASSLAEKLGPRLSAICEAPEIAGPGFINLRLRDGFVAA 122 Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 + S+V G G + +V ++F S N MHVGH R ++GDT+ ++ F G++ Sbjct: 123 KVKSMVGDGERLGVPRVTNPERVVVDFSSPNIAKEMHVGHLRSTIIGDTICRVLEFRGHD 182 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 V R ++ D G Q L + + PE G K +L Y Sbjct: 183 VVRLNHVGDWGTQFGML-----------ISHLKEVAPEAIEDGAEDKFNVGDLVTFYKEA 231 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ--------HDIF--ISEDDFHRGDP 270 F E+ + V + + +A + DI+ + + RG+ Sbjct: 232 KARFDEDDGFKEIARAEVVKLQAGDAESKRAWGVLCEASRRGFQDIYSLLGVELEERGES 291 Query: 271 ---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD-VDRPLL- 325 + D++ +L +G + E D ++++ D +PLL Sbjct: 292 FYNVMLPDVVSDLESEGLLEES---------------DGAKVVYLEGFESRDGTSQPLLV 336 Query: 326 -KSDGSYTYFAADLAYFKCKY--ERGFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQ 380 KSDG + Y DLA + + ER D ++YV+ + ++ VA A + + Q Sbjct: 337 KKSDGGFMYSTTDLAAIRHRVTTERA-DRVLYVVDVGQGSHFAQVFQVARRAGFAPEGVQ 395 Query: 381 --------------------------INVLLCELVRLYRDGMPIKMSKRAG-----DFIT 409 ++ LL E VR+ + + + + G D + Sbjct: 396 LQHVPFGLVQGEDGKKFKTRAGETVKLSDLLMEAVRIAGESIRKRREEEGGEGYQADEVE 455 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 L V VG +V++ L F + K+ + N Y+ YA+AR + I ++A Sbjct: 456 LERVSKVVGIGAVKYADLSMNRESNYRFSYAKML-SLQGNTAPYMLYAFARVQGIKKKAT 514 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 + DL P+E+ L+L P V+E+ + P++L Y+++L+ Sbjct: 515 EGLGDLSGTEISMGT-PEEAALARMLLRL-------PEVLEDLEVDLFPHRLCDYMFELS 566 Query: 530 SVFH 533 S F+ Sbjct: 567 SQFN 570 >gi|47208421|emb|CAF89939.1| unnamed protein product [Tetraodon nigroviridis] Length = 696 Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 138/610 (22%), Positives = 245/610 (40%), Gaps = 108/610 (17%) Query: 49 AAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS 108 A M+ ++ + ++P IAE I + + + IAG GFIN++L S++ K+LS ++++ Sbjct: 122 AQMLKAKGVKVNPREIAERITRNLPDNELIQKTEIAGPGFINIHLKRSFVSKLLSKLLIN 181 Query: 109 GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168 G++ + +V ++F S N MHVGH R ++GD+++ L F G++V R ++ Sbjct: 182 GVKPPP--LASRKRVVVDFSSPNIAKEMHVGHLRSTIIGDSMSRLFEFLGHDVLRLNHVG 239 Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228 D G Q L + ++ L + P G Y KE ++ + F + Sbjct: 240 DWGTQFGMLIAHLQDKFPDYL---TASPPIGDLQAFY-----KESKKRFDED-EAFKKRA 290 Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVY 287 + +VK S + D +KA N+ D +S +F + I D +D + +G Y Sbjct: 291 YQCVVKLQSKEP------DFIKAWNLICD--VSRQEFQK-----IYDCLDIKIIERGESY 337 Query: 288 -----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342 ++ + + + D RK ++F G + ++KSDG YTY +DLA + Sbjct: 338 YQDLMTDVVKEAEDRGFVQLDEGRK-IIFAP---GQSLPLTVVKSDGGYTYDTSDLAALR 393 Query: 343 CK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE--------KKAQINVLLCELVRLYR 393 + +E D +IYV S + + + A A + + A V+L E RL R Sbjct: 394 QRLFEEKADTIIYVTDSGQGSHFQVVFAAAQMLGWYDPKVTRVEHAGFGVVLGEDKRLQR 453 Query: 394 DGMPI----------------------------KMSKRAGDFITLRHVVDE--------- 416 I K R+G+ + L ++DE Sbjct: 454 SRNRIRHRYPAPTSVLGLRAADVSSALPNLPRKKFKTRSGETVRLMDLLDEGLKRSMDKL 513 Query: 417 --------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456 V +++ L F F K+ + + N Y+ Y Sbjct: 514 KEKERDQVLTADELVKAQRAVAFGCIKYADLSHNRINDYVFSFDKMLD-DRGNTAAYLLY 572 Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIA 515 A+ R RSI R A ++D + E + E +L + +P ++ Sbjct: 573 AFTRIRSIARLA-----NIDEATLRKEAASTEILLEHEKEWKLGKCILRFPEILVKILDD 627 Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575 + L YLY+LA+ F + + R K+ M R+ L A A+I+ + Sbjct: 628 LLLHSLCDYLYELATTFTEFYDSCYCVEKDRQT-GEVVKVNMWRMLLCDATAAIMAQCFH 686 Query: 576 IIGVESPNEM 585 I+G+ M Sbjct: 687 ILGLNPVERM 696 >gi|291300762|ref|YP_003512040.1| arginyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728] gi|290569982|gb|ADD42947.1| arginyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728] Length = 570 Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 137/612 (22%), Positives = 236/612 (38%), Gaps = 125/612 (20%) Query: 38 RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 R H TN + L++ G P +A +V ++ + V +A GF+N+ ++ + Sbjct: 20 RRSDHADFQTNGILPLAKQAGQQPRDLAVAVVDQLDHGDLLSEVTVASPGFVNITVTDAA 79 Query: 98 L-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 + R++ + S + G+ G T V ++ + N MHVGH R V+GD LA L+ Sbjct: 80 VWRQVEQRLADSLLGLGQPEAGSTTVV--DYSAPNVAKQMHVGHLRSTVIGDALARLLEA 137 Query: 157 SGYEVTREYYINDAGAQINTL-----------------------ALSVFWRYQQALYNND 193 G V R+ ++ D G Q L L +R +A+++ D Sbjct: 138 LGATVIRQNHLGDWGTQFGMLIQYLDEHPDLDWHRRGDHSPGIDTLDALYRAARAVFDTD 197 Query: 194 SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK-IIRDDLKAL 252 +D AD+ ++ D + A+ + ++R ++A Sbjct: 198 TD-----------------FADRSRKRVVALQS-------GDAATVAVWRDLVRTSMEAF 233 Query: 253 N-IQHDIFISEDDFHRGDPSP----IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307 N I + +S D H S + D++ L G E D Sbjct: 234 NAIYRRLGVSLTDEHLAGESSYNPLLADVVSALVEAGIAVES---------------DGA 278 Query: 308 QLLFRSTMVGDDVDR-PLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY 363 +F G + PL+ K DG + Y A DLA + + + G D ++Y++ + S + Sbjct: 279 LCVFDDRFTGHEGQPIPLIVRKRDGGFGYAATDLATIRHRAQDLGADRVLYLVDARQSLH 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 +++ A A + V L DG P K R+G + L ++D D Sbjct: 339 FRQVFAAARRAGWLGDDVEVRHVPFGTVLGADGKPFK--TRSGGTVALTSLLD-AAVDGA 395 Query: 423 RFMMLWRKNSEL---------------------------LDFDFCKVKEQS-KENPVFYV 454 R ++ KN EL D+ F K + N Y+ Sbjct: 396 R-AVVADKNPELPAAELDAIAEAAGIGAVKYADLSTARGTDYRFNVDKMVALNGNTGVYL 454 Query: 455 QYAYARCRSIFRQA-KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513 QYA+ R SI R++ + DL P +E L +HL +Y RV+ + Sbjct: 455 QYAHTRIASILRKSPTGTHAAVHVDLPPH----------PAERVLALHLDDYSRVLADTV 504 Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573 EP+++A YL++LA +F + EN + A + + RL L ++ G Sbjct: 505 EQLEPHRVATYLFELAKLFSAFY----EN--CPVLSAADSAVRGNRLALTELARRTLSHG 558 Query: 574 LNIIGVESPNEM 585 L I+G+ + M Sbjct: 559 LCILGITALERM 570 >gi|331220739|ref|XP_003323045.1| arginyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309302035|gb|EFP78626.1| arginyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 626 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 141/595 (23%), Positives = 234/595 (39%), Gaps = 117/595 (19%) Query: 55 RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL-SPSYLRKIL------SSIVV 107 R G DP +A+ I + + + S G F+ + S + R +L + + Sbjct: 85 RIKGSDPKQLAKKIQDEFQTNEWIQSANAEG-AFVKFQMDSKTLCRTVLHQVNELTHLSN 143 Query: 108 SGIEYGRNL------IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161 +G YG N GK K+ +EF S N H GH R ++G L +L +G++V Sbjct: 144 TGGGYGTNSSGIDPSTGKKKKLVLEFSSPNIAKKFHAGHLRSTIIGAFLGNLHEANGWDV 203 Query: 162 TREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGVYLK------HVGKEL 213 R Y+ D G Q LA+ F RY +Q L S+ P + VY K KE Sbjct: 204 KRINYLGDWGRQFGVLAVG-FERYGSEQEL----SEQPIQHLLDVYTKINKDMEGEEKEA 258 Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD--------DLKALNIQHDIFISEDDF 265 ++ + + EE D + A+ K RD D LNI+ D++ E Sbjct: 259 LEQKARDFFKLMEE------GDSTAVALWKRFRDYSIKQYEQDYARLNIKFDVYSGESQV 312 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 + + L +G E K T CD+D +L G V R Sbjct: 313 TH---ESMDVALKVLREKGIAIE-------DKGTLICDLDAYKL-------GRTVIR--- 352 Query: 326 KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS---------------GYVKRLE- 368 KSDG+ Y D+ +Y++ FD MIYV+ S + K+L+ Sbjct: 353 KSDGTNLYITRDIGEAIQRYDKYQFDKMIYVVASQQDLHLAQFFKVLDLMGFPWAKKLQH 412 Query: 369 ---AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL---RHVVDEVGSDSV 422 + A +S +K +V L +++ R+ M +M + + DEVG + Sbjct: 413 INFGMVAGMSTRKG-TSVHLEDMMNEARNTMHEQMKTNVDKYNEIPDPLRTADEVGISGI 471 Query: 423 RFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 + + K +F + +V + P Y+QYA+ R S+ R+A P Sbjct: 472 KIQDMAGKRINGYEFKWDRVLSFEGDTGP--YLQYAHVRLCSVERKAA-----------P 518 Query: 482 RNVIPQ----ESEFDTSEL-------QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 V+P+ +E +TS L +L+V L+ YP ++ A EP + Y + L Sbjct: 519 TYVLPEPTKIAAEIETSILSEEAKARELVVLLSLYPDAVKTAFSKLEPSSIVTYCWRLTH 578 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W V+ ++ + RL L + ++ S + ++ +E + M Sbjct: 579 AVSSAW-------ETLIVKGQDQPTALARLWLFRSCKDVLASAMKLLTLEPLDRM 626 >gi|229524081|ref|ZP_04413486.1| arginyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426] gi|229337662|gb|EEO02679.1| arginyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426] Length = 599 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 134/620 (21%), Positives = 235/620 (37%), Gaps = 136/620 (21%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ LG +P A+ ++ + +D IAG GFIN++ Sbjct: 49 LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLDGIASKTEIAGPGFINIF 108 Query: 93 LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 LS +L + + G+ E + ++ ++ + N MHVGH R ++G Sbjct: 109 LSEEFLAAQAEAALADARLGVAQEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIG 161 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188 D + + F G++V R +I D G Q L L F+R + Sbjct: 162 DAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKK 221 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245 LY+ D E A Y +L F E W +V +Q Sbjct: 222 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ------ 261 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---C 302 ++ ++ R + S R+ + + +Y +LP S K Sbjct: 262 ---------------NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAV 302 Query: 303 DMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358 + D Q++F G+ + + K DG + Y D+A K +YE G D ++Y + S Sbjct: 303 EDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDS 362 Query: 359 DHSGYVKRLEAVAAAVSEKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHV 413 ++ + A + K I NV L + L +DG P K RAG + L + Sbjct: 363 RQHQHLMQ----AWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADL 416 Query: 414 VDEVGSDSVRFMMLWRKNSEL-----------LDFDFCKVKEQSKE-------------- 448 +DE ++ ++ KN EL + K + SK Sbjct: 417 LDE--AEERAKALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLA 474 Query: 449 ---NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 N Y+QYAY R S+F +A +D + ++ E + E LI L ++ Sbjct: 475 FEGNTAPYMQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQF 525 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 +++ +P+ + YL++LA +F + + A + RL+L Sbjct: 526 DEAVQSVAREGQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESIKQSRLKLAAL 579 Query: 566 VASIINSGLNIIGVESPNEM 585 A I GL ++G+++ M Sbjct: 580 TAKTIKQGLALLGIDTLERM 599 >gi|161723314|ref|NP_245488.2| arginyl-tRNA synthetase [Pasteurella multocida subsp. multocida str. Pm70] Length = 577 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 140/600 (23%), Positives = 245/600 (40%), Gaps = 116/600 (19%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LG +P A+ ++ ++ + + + IAG GFINL+L ++L + + Sbjct: 37 GDYQANGIMAAAKKLGRNPREFAQQVIEQLDLSEIAEKIEIAGPGFINLFLDKNWLAEQI 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 S + V+ + G T V ++ S N MHVGH R ++GD + + F G +V Sbjct: 97 S-LAVNDDKLGIQATETQTVV-ADYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND------SDLPEGYYPGVYLKHVGKELADK 216 R ++ D G Q L Y + + N SDL E +Y + + Sbjct: 155 RANHVGDWGTQFGMLI-----AYLEKVENESASEMELSDL-EAFY---------RAAKEH 199 Query: 217 YSSELLNFPEEKWLPIVK----DYSVQAMMKIIRDDLKALNIQH-----DIFISEDDFHR 267 Y S+ + F E+ +VK D + M K + D N QH ++ ++E D Sbjct: 200 YDSDPV-FAEKARNYVVKLQSGDEYCRTMWKKLVDITMQQN-QHNYDRLNVTLTEKDVM- 256 Query: 268 GDP--SP-IRDIIDNLARQGYVYEG------ILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 G+ +P + DI+ +L +QG E L K+K G+ Sbjct: 257 GESLYNPMLSDIVADLKQQGLAVEDEGAFVVYLDEFKNKE------------------GE 298 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 + + K DG + Y D+A K +YE D + + S ++++ A ++ K Sbjct: 299 PMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRALVFSDTRQSQHMQQ----AWLITRK 354 Query: 378 KAQI-NVLLCEL----VRLYRDGMPIKMSKRAGDFITLRHVVDE---------------- 416 + + E + L +DG P K R G + L ++DE Sbjct: 355 AGYVPDSFQLEHKNFGMMLGKDGKPFKT--RTGGTVKLADLLDEAVERATQLIQEKSTAL 412 Query: 417 -----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 V SV++ L + + FD+ + + N Y+QYAY R RSIF Sbjct: 413 SAQEKAAVIEAVAIGSVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIF 471 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 +++ + D P V+ E E L + L ++ I+ P+ L YL Sbjct: 472 NRSE--LNEQDLSESPV-VLSNE-----KERLLAIKLLQFEEAIQIVAKEGTPHVLCTYL 523 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 Y+LA VF + H + + ++ RL+L + GL+++G+++ ++M Sbjct: 524 YELAGVFSSFYEH------CPILNNEDEQIKRSRLKLALLTEKTLKQGLDLLGIKTVDKM 577 >gi|148243340|ref|YP_001228497.1| arginyl-tRNA synthetase [Synechococcus sp. RCC307] gi|166228634|sp|A5GW85|SYR_SYNR3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|147851650|emb|CAK29144.1| Arginyl-tRNA synthetase [Synechococcus sp. RCC307] Length = 590 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 141/602 (23%), Positives = 240/602 (39%), Gaps = 110/602 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98 G N A+ L++PL P IA IV +++ +P+ ++ IAG GFIN+ L PS L Sbjct: 40 GDFQANGALALAKPLKQAPRQIAAAIVEQLQNNPEFSALAEAPQIAGPGFINITLKPSVL 99 Query: 99 RKILSSIV------VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 + + V+ +E V ++F S N MHVGH R ++GD LA Sbjct: 100 AAEVRQRIGDPRLGVAAVEQAE------APVIVDFSSPNIAKEMHVGHLRSTIIGDCLAR 153 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGK 211 ++ F G++V R ++ D G Q L + +AL D+ DL + + + K Sbjct: 154 VLEFRGHQVLRLNHVGDWGTQFGMLITHLKQVAPEALNTADAIDLGDLV---AFYREAKK 210 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQA---MMKIIRDDLKALNIQHDIFISEDDFHRG 268 D + + + E L S++A + R + + + + DI ++E Sbjct: 211 RFDDDEAFQTTSREEVVKLQGGDATSLKAWGLLCDQSRREFQKIYDRLDIRLNERGESFY 270 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL---- 324 +P + ++D+L G + + C +F +VG + +PL Sbjct: 271 NPQ-LAAVVDDLRSSGLLV--------TDEGAGC-------VFLEGVVGKE-GKPLPLIV 313 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGY-------VKRLEAVAAAV 374 KSDG + Y DLA + + D +IYV + + + KR V AA Sbjct: 314 QKSDGGFNYATTDLAAIRYRLGSAGDGAGRVIYVTDAGQAAHFAGVFQVAKRAGWVPAAA 373 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 S + ++ + DG K+ RAGD + L+ ++DE Sbjct: 374 SLEHVPFGLVQGD------DGK--KLKTRAGDTVRLKDLLDEAVERAQADLRRRLEEEER 425 Query: 417 -------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463 VG +V++ L F F ++ + N Y+ YA R Sbjct: 426 QESESFIDQVATTVGLAAVKYADLSTNRITNYQFSFERMLALTG-NTAPYLLYAVVRISG 484 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ LD +L P ++ +E + E LI L + VI P +L Sbjct: 485 IARKGG----ALDGEL-PERLVFEEPQ----EWALIRQLLQLDAVISEVESDLLPNRLCT 535 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 YL++L+ F+ + + P L+ + + RL L A + GL+++G+ S Sbjct: 536 YLFELSQSFNRFYD---QVPVLK----ADEPMRSSRLALCRLAADTLKLGLSLLGIPSLE 588 Query: 584 EM 585 M Sbjct: 589 RM 590 >gi|325571092|ref|ZP_08146664.1| arginine--tRNA ligase [Enterococcus casseliflavus ATCC 12755] gi|325156177|gb|EGC68363.1| arginine--tRNA ligase [Enterococcus casseliflavus ATCC 12755] Length = 563 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 134/596 (22%), Positives = 248/596 (41%), Gaps = 102/596 (17%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P+ HG ++ A L++ P IA + +I + + + G ++N + Sbjct: 27 LLENPKSADHGDVAF-PAFSLAKVYRKAPQQIAADLAEKID-QASFEKIEVVGP-YLNFF 83 Query: 93 LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + +L ++ +G IG V I+ S N P+ +GH R V+G+++ Sbjct: 84 MDKKAISAHVLELVLKEKNHFGDQTIGNQQAVPIDMSSPNIAKPISMGHLRSTVIGNSIG 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNND-SDLPEGYYPGVYLKHV 209 ++ GY+ R ++ D G Q L ++ W ++A+ ++L Y Sbjct: 144 FILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEEAVKAEPINELLRLYVDFHEAAET 203 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAM--MKIIRDD-LKALNIQHDIFISEDDFH 266 K+L D + W ++D +AM + RD+ LK N +D+ E F Sbjct: 204 DKQLEDDARA---------WFKKLEDGDQEAMDLWQWFRDESLKEFNKIYDML--EVSF- 251 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD----- 321 D+L + + K T+ ++ ++ L + + VD Sbjct: 252 -----------DSLNGEAFY--------NDKMTEVVELLEEKHLLKEDQGAEIVDLAAYD 292 Query: 322 -RPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV----- 370 P L KSDG+ Y D+A Y K Y F +YV+G++ S + K+L+AV Sbjct: 293 LNPALIRKSDGATLYITRDMAAALYRKRTY--NFAKSLYVVGNEQSYHFKQLKAVLKEMG 350 Query: 371 ------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412 +S +K +I VLL E++ D +++++ Sbjct: 351 FEWADDMTHVPFGLITKDGKKLSTRKGKI-VLLEEVLNEAIDSAKEQITEKNPTLENKEE 409 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAK 469 V +VG +V F L KN L +FDF V+ + + P YVQY++AR SI +A Sbjct: 410 VAKQVGVGAVVFHDL--KNDRLNNFDFTLEEVVRFEGETGP--YVQYSHARAMSILEKAN 465 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 F + + D ++I + YP + A EP +A + LA Sbjct: 466 ----------FDPAAVSSLALADAESWEVIKLIQRYPETVMQAAEKYEPSVIAKHAIKLA 515 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ ++++ ++ + + K RL LV+AV +++ L ++G+ +P++M Sbjct: 516 QAFNKYYAN------VKILAEDTEKDA--RLALVYAVTTLLKEDLRLLGLHAPDKM 563 >gi|313501065|gb|ADR62431.1| ArgS [Pseudomonas putida BIRD-1] Length = 578 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 1/146 (0%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE ++ + D+ V IAG GF+N Sbjct: 30 IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLINALPTSADISKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + L L + + G G KV I+ + N MHVGH R ++GD++A Sbjct: 90 FQNTDALANRLDAALADA-HLGARKAGPAQKVVIDMSAPNLAKEMHVGHLRSTIIGDSVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177 ++ F G V R+ ++ D G Q L Sbjct: 149 RVLEFLGDNVIRQNHVGDWGTQFGML 174 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 19/155 (12%) Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 LRH+ + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 419 LRHIGEVVGIGAVKYADLSKHRTSDYSFNF-ELMLNFEGNTAPYLLYAYTRVAGVFRKLG 477 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 F ++D ++ Q + E L LA++ ++ N P+ L YLYDLA Sbjct: 478 KGFDEVD-----GKIVLQAAH----EQDLAARLAQFGEILNNVAEKGTPHVLCSYLYDLA 528 Query: 530 SVFHGHWSH---------GRENPRLRFVQANNRKL 555 +F + + ++ RLR R L Sbjct: 529 GLFSSFYENCPILAAETPSQQQSRLRLAALTGRTL 563 >gi|104779603|ref|YP_606101.1| arginyl-tRNA synthetase [Pseudomonas entomophila L48] gi|122985979|sp|Q1IGB8|SYR_PSEE4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|95108590|emb|CAK13284.1| arginine tRNA synthetase [Pseudomonas entomophila L48] Length = 578 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 49/146 (33%), Positives = 78/146 (53%), Gaps = 1/146 (0%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE I+A + D+ IAG GF+N Sbjct: 30 IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKIIAALPTSADISKAEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + L L + + G + G KV I+ + N MHVGH R ++GD++A Sbjct: 90 FQNTDALANRLDAALADD-HLGVHKAGPVEKVVIDMSAPNLAKEMHVGHLRSTIIGDSVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177 ++ F G +V R+ ++ D G Q L Sbjct: 149 RVLEFLGDDVIRQNHVGDWGTQFGML 174 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 19/155 (12%) Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 LR + + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 419 LRKIGEVVGIGAVKYADLSKHRTSDYSFNF-ELMLNFEGNTAPYLLYAYTRVAGVFRKLG 477 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 F ++D N++ Q + E L LA++ ++ N P+ L YLYDLA Sbjct: 478 KGFDEVD-----GNIVLQAAH----EQDLAARLAQFGEILNNVADKGTPHVLCSYLYDLA 528 Query: 530 SVFHGHWSH---------GRENPRLRFVQANNRKL 555 +F + + ++ RLR R L Sbjct: 529 GLFSSFYENCPILAAETAEQQQSRLRLAALTGRTL 563 >gi|262191347|ref|ZP_06049538.1| arginyl-tRNA synthetase [Vibrio cholerae CT 5369-93] gi|262032766|gb|EEY51313.1| arginyl-tRNA synthetase [Vibrio cholerae CT 5369-93] Length = 592 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 134/620 (21%), Positives = 234/620 (37%), Gaps = 136/620 (21%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ LG +P A+ ++ + +D IAG GFIN++ Sbjct: 42 LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLDGIASKTEIAGPGFINIF 101 Query: 93 LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 LS +L + + G+ E + ++ ++ + N MHVGH R ++G Sbjct: 102 LSEEFLAAQAEAALADARLGVAQEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIG 154 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188 D + + F G++V R +I D G Q L L F+R + Sbjct: 155 DAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKK 214 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245 LY+ D E A Y +L F E W +V +Q Sbjct: 215 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ------ 254 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---C 302 ++ ++ R + S R+ + + +Y +LP S K Sbjct: 255 ---------------NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAV 295 Query: 303 DMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358 + D Q++F G+ + + K DG + Y D+A K +YE G D ++Y + S Sbjct: 296 EDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDS 355 Query: 359 DHSGYVKRLEAVAAAVSEKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHV 413 ++ + A + K I NV L + L +DG P K RAG + L + Sbjct: 356 RQHQHLMQ----AWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFKT--RAGGTVRLADL 409 Query: 414 VDEVGSDSVRFMMLWRKNSEL-----------LDFDFCKVKEQSKE-------------- 448 +DE + ++ KN EL + K + SK Sbjct: 410 LDEAQERAK--ALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLA 467 Query: 449 ---NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 N Y+QYAY R S+F +A +D + ++ E + E LI L ++ Sbjct: 468 FEGNTAPYMQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQF 518 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 +++ +P+ + YL++LA +F + + A + RL+L Sbjct: 519 EEAVQSVAREGQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESIKQSRLKLAAL 572 Query: 566 VASIINSGLNIIGVESPNEM 585 A I GL ++G+++ M Sbjct: 573 TAKTIKQGLALLGIDTLERM 592 >gi|125777988|ref|XP_001359796.1| GA10066 [Drosophila pseudoobscura pseudoobscura] gi|54639546|gb|EAL28948.1| GA10066 [Drosophila pseudoobscura pseudoobscura] Length = 572 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 122/508 (24%), Positives = 202/508 (39%), Gaps = 95/508 (18%) Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V +E+ S N P HVGH R ++G+ LA+L GY TR Y+ D G Q LAL V Sbjct: 115 VVVEYSSPNIAKPFHVGHLRSTIIGNVLANLHQHLGYRTTRLNYLGDWGTQFGLLALGV- 173 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE---------------E 227 Q +D D+ +Y +V A + + E+ + Sbjct: 174 ----QLTNVSDKDMQRAPIETLYRSYVAANKAAEENPEIAQRARDLFTALEAGTDDAMAQ 229 Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287 +W + Y+++ + + L + D + E + + I ++++ L G + Sbjct: 230 QWQQ-YRQYTIEELSGVY----NRLGVHFDSYEWESQYSQ---QQISEVLEKLRSAGLL- 280 Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347 ++++ R +V DD P++KSDGS Y A D+A ++ R Sbjct: 281 ------------------QREVDGREIVVVDDRRIPVIKSDGSTLYLARDIAALLERHSR 322 Query: 348 -GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406 F ++YV+ + + + L AA+ ++ L E ++ + G MS R G Sbjct: 323 LQFSRILYVVDNGQADHFNALFKTTAALDKR------LSLEQLKHVKFGRIHGMSTRQGK 376 Query: 407 FITLRHVVDEVGSDSVRFMMLW----RKNSELLDFDFCKV-----------KEQSKENPV 451 I LR V+DE D +R + R NS L D D C + K++ + + Sbjct: 377 AIFLRDVLDE-ARDVMREKRIQTQTTRSNSSLDDEDVCDILGVSAVLVNVLKQRRQRDHE 435 Query: 452 FYVQYA------------YARCR--SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497 F Q+A Y CR S+ KDI DL+ D+ P S+ L Sbjct: 436 FSWQHALQVNGDTGIKLQYTHCRLHSLLENFKDI--DLE-DIRPD--WQHYSQEPVDALD 490 Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557 L+ LA + + I + E L YL+ L + + R RL Q + Sbjct: 491 LLYELARFDQCIWQSKEQLEACVLVNYLFGLCN------ATSRALKRLPVKQESCPLKQS 544 Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L A + G+ ++G+ N+M Sbjct: 545 QRLLLFQAAKRTLQQGMQLLGLRPLNQM 572 >gi|297579579|ref|ZP_06941507.1| arginyl-tRNA synthetase [Vibrio cholerae RC385] gi|297537173|gb|EFH76006.1| arginyl-tRNA synthetase [Vibrio cholerae RC385] Length = 599 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 134/617 (21%), Positives = 234/617 (37%), Gaps = 130/617 (21%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ LG +P A+ ++ + +D IAG GFIN++ Sbjct: 49 LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLDGIASKTEIAGPGFINIF 108 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVGDTL 150 LS +L + + R + + + I ++ + N MHVGH R ++GD + Sbjct: 109 LSEEFLAAQAEAALADA----RLGVAQESPKTIVADYSAPNVAKEMHVGHLRSTIIGDGV 164 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYN 191 + F G++V R +I D G Q L L F+R + LY+ Sbjct: 165 VRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLYD 224 Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKIIRDD 248 D E A Y +L F E W +V +Q Sbjct: 225 EDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ--------- 261 Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---CDMD 305 ++ ++ R + S R+ + + +Y +LP S K + D Sbjct: 262 ------------NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAVEDD 305 Query: 306 RKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361 Q++F G+ + + K DG + Y D+A K +YE G D ++Y + S Sbjct: 306 GAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQH 365 Query: 362 GYVKRLEAVAAAVSEKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHVVDE 416 ++ + A + K I NV L + L +DG P K RAG + L ++DE Sbjct: 366 QHLMQ----AWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLDE 419 Query: 417 VGSDSVRFMMLWRKNSEL-----------LDFDFCKVKEQSKE----------------- 448 ++ ++ KN EL + K + SK Sbjct: 420 --AEERAKALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEG 477 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 N Y+QYAY R S+F +A +D + ++ E + E LI L ++ Sbjct: 478 NTAPYMQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQFEEA 528 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 +++ +P+ + YL++LA +F + + A + RL+L A Sbjct: 529 VQSVAREGQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESIKQSRLKLAALTAK 582 Query: 569 IINSGLNIIGVESPNEM 585 I GL ++G+++ M Sbjct: 583 TIKQGLALLGIDTLERM 599 >gi|229513729|ref|ZP_04403191.1| arginyl-tRNA synthetase [Vibrio cholerae TMA 21] gi|229348910|gb|EEO13867.1| arginyl-tRNA synthetase [Vibrio cholerae TMA 21] Length = 599 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 134/610 (21%), Positives = 231/610 (37%), Gaps = 136/610 (22%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LG +P A+ ++ + +D IAG GFIN++LS +L Sbjct: 59 GDYQANGIMGAAKQLGTNPREFAQKVLDVLNLDGIASKTEIAGPGFINIFLSEEFLAAQA 118 Query: 103 SSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + G+ E + ++ ++ + N MHVGH R ++GD + + F Sbjct: 119 EAALADARLGVAQEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIGDAVVRTLEFL 171 Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198 G++V R +I D G Q L L F+R + LY+ D Sbjct: 172 GHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLYDEDEQFA- 230 Query: 199 GYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255 E A Y +L F E W +V +Q Sbjct: 231 -------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ---------------- 261 Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFR 312 ++ ++ R + S R+ + + +Y +LP S K + D Q++F Sbjct: 262 -----NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAVEDDGAQVVFL 312 Query: 313 STMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLE 368 G+ + + K DG + Y D+A K +YE G D ++Y + S ++ + Sbjct: 313 EEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQHQHLMQ-- 370 Query: 369 AVAAAVSEKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 A + K I NV L + L +DG P K RAG + L ++DE + Sbjct: 371 --AWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLDEAQERAK- 425 Query: 424 FMMLWRKNSEL-----------LDFDFCKVKEQSKE-----------------NPVFYVQ 455 ++ KN EL + K + SK N Y+Q Sbjct: 426 -ALIESKNPELSAEEKTNIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQ 484 Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515 YAY R S+F +A +D + ++ E + E LI L ++ +++ Sbjct: 485 YAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQFEEAVQSVARE 535 Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575 +P+ + YL++LA +F + + A + RL+L A I GL Sbjct: 536 GQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESIKQSRLKLAALTAKTIKQGLA 589 Query: 576 IIGVESPNEM 585 ++G+++ M Sbjct: 590 LLGIDTLERM 599 >gi|116072008|ref|ZP_01469276.1| arginyl-tRNA synthetase [Synechococcus sp. BL107] gi|116065631|gb|EAU71389.1| arginyl-tRNA synthetase [Synechococcus sp. BL107] Length = 590 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 144/602 (23%), Positives = 234/602 (38%), Gaps = 110/602 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98 G N A+ L++PL P IA IV ++ D +++ IAG GFINL + P L Sbjct: 40 GDFQANGALPLAKPLKQPPRQIATAIVDQLSGDEAFNALCLAPQIAGPGFINLTIRPERL 99 Query: 99 RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158 + L++ + + G + V ++F S N MHVGH R ++GD+LA ++ F G Sbjct: 100 AEELAARLGTD-RLGVPAVDNAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRG 158 Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218 + V R ++ D G Q L +LK V E D Sbjct: 159 HSVLRLNHVGDWGTQFGMLI-------------------------THLKQVAPETLDTAD 193 Query: 219 S----ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE----DDFHRGDP 270 + +L+ F E D + QA RD++ L + + D R + Sbjct: 194 AVDLGDLVAFYREAKKRFDDDDAFQATS---RDEVVKLQGGDPVSLKAWGLLCDQSRREF 250 Query: 271 SPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMVGDDVDRPL- 324 + D +D L+ +G + P + + D+ D Q +F + G D + PL Sbjct: 251 QKLYDRLDIRLSERGESFYNPYLPAVLEGLKAVDLLVTDDDAQCVFLEGVTGKDGN-PLP 309 Query: 325 ---LKSDGSYTYFAADLAYFKCKYER-----GFDNMIYVMGSDHSGYVKRLEAVA--AAV 374 K DG + Y DLA + ++ +IYV + + + + VA A Sbjct: 310 VIVQKRDGGFNYATTDLAAIRYRFASSPAGDAAQRVIYVTDAGQANHFAGVFQVAERAGW 369 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 +A++ + LV+ DG K+ RAGD + LR ++DE Sbjct: 370 IPAEARLEHVPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVERSEQDLRSRLQEEER 426 Query: 417 -------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463 VG +V++ L + F F ++ + N Y+ YA R Sbjct: 427 TESDAFISHVATTVGLAAVKYADLSQNRLTNYQFSFDRMLAL-QGNTAPYLLYAVVRIAG 485 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ DL N Q SE E L+ L ++ RVI P +L Sbjct: 486 IARKGG--------DLGVSNAALQFSE--PQEWALVRELLKFDRVIVEVEDELLPNRLCS 535 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 YL++L+ VF+ + + ++A L RL L A + GL ++G+ + Sbjct: 536 YLFELSQVFNRFYDQ------VPVLKAEPSALA-SRLALCRHTADTLRCGLALLGIPTLE 588 Query: 584 EM 585 M Sbjct: 589 RM 590 >gi|56964053|ref|YP_175784.1| arginyl-tRNA synthetase [Bacillus clausii KSM-K16] gi|56910296|dbj|BAD64823.1| arginyl-tRNA synthetase [Bacillus clausii KSM-K16] Length = 608 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 138/585 (23%), Positives = 227/585 (38%), Gaps = 118/585 (20%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFIN 90 + +E+P HG STN AM L+R +PLTIAE I +++ V + + GFIN Sbjct: 24 VELEQPAQLIHGDYSTNVAMKLARVARKNPLTIAETIKEKLERQRLPVTGIEVVKPGFIN 83 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 ++ + G E + K IE S NP H+GH R A +GDTL Sbjct: 84 FFIE-------WDEALADGDE--PQALSSSGKTVIEHTSINPNKSAHIGHLRNACIGDTL 134 Query: 151 ASLMAFSGYEVTREYYINDAGAQ--------INTLALSVFWRYQQALYNNDSDLPEGYYP 202 A L+ G V Y++D G Q ++T + S R+ +N S L E Y Sbjct: 135 ARLLKTCGENVEVHNYVDDLGNQLADTLTALLHTNSDSEATRFGDYCWNVYSRLNEAYDK 194 Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLP-IVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 G + E+ K WL +V D + +++ I +D+ + Sbjct: 195 GTISTSIRDEVLHKLEE---GNNSTAWLGYVVADKITSEHI----EEMGQFGIDYDLLVW 247 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD-- 319 E RDI+ ++G+ +S K D + + M ++ Sbjct: 248 E-----------RDIV----QKGFWQTAFQKLKQSDVFVKQDSGPQAGCWVLRMSDNESE 292 Query: 320 ------VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY------VMGSDHSG----- 362 D+ L++S+G TY A D+AY K+ D+ Y + + SG Sbjct: 293 EGSEHQSDKVLVRSNGVLTYTAKDIAYHMWKFGLLDDDFAYKEKWPGLWTTASSGVPAAF 352 Query: 363 ---------------YVKRL--EAVAAAVSEKKA-------------------QINVLLC 386 Y +++ +A+AA EK+A Q+ + Sbjct: 353 GRGDAVINVIDYRQEYPQKVVKQALAAVGYEKEAERLFHVPYGVVSLSKQTASQLGLETE 412 Query: 387 ELVRLY----RDGMPIKMSK---------RAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433 + +Y R G+ IK+S+ RA V+ + ++R+ ML + Sbjct: 413 DGKSVYAMSGRKGIGIKISELIQHMKEAVRAQSTDASEATVEALAFAAIRYNMLRYNTTS 472 Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493 + FD + Q N Y+ Y YAR SI +AK L P + +E Sbjct: 473 DIVFDLTEAT-QVTGNTGIYLIYTYARANSIITKAKQA------GLSPEGATFKGAE--D 523 Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 +E L+ HLA + V A + EP + + ++LAS+++ +S Sbjct: 524 AERALLKHLAGWDTVKRKAAASFEPNLICTFAFELASLYNRFYSQ 568 >gi|229528909|ref|ZP_04418299.1| arginyl-tRNA synthetase [Vibrio cholerae 12129(1)] gi|229332683|gb|EEN98169.1| arginyl-tRNA synthetase [Vibrio cholerae 12129(1)] Length = 591 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 134/620 (21%), Positives = 234/620 (37%), Gaps = 136/620 (21%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ LG +P A+ ++ + +D IAG GFIN++ Sbjct: 41 LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLDGIASKTEIAGPGFINIF 100 Query: 93 LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 LS +L + + G+ E + ++ ++ + N MHVGH R ++G Sbjct: 101 LSEEFLAAQAEAALADARLGVAQEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIG 153 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188 D + + F G++V R +I D G Q L L F+R + Sbjct: 154 DAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKK 213 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245 LY+ D E A Y +L F E W +V +Q Sbjct: 214 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ------ 253 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---C 302 ++ ++ R + S R+ + + +Y +LP S K Sbjct: 254 ---------------NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAV 294 Query: 303 DMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358 + D Q++F G+ + + K DG + Y D+A K +YE G D ++Y + S Sbjct: 295 EDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDS 354 Query: 359 DHSGYVKRLEAVAAAVSEKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHV 413 ++ + A + K I NV L + L +DG P K RAG + L + Sbjct: 355 RQHQHLMQ----AWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFKT--RAGGTVRLADL 408 Query: 414 VDEVGSDSVRFMMLWRKNSEL-----------LDFDFCKVKEQSKE-------------- 448 +DE + ++ KN EL + K + SK Sbjct: 409 LDEAQERAK--ALIESKNPELSAEEKAAIANTVAMAAVKYADLSKHRTTDYVFDWDNMLA 466 Query: 449 ---NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 N Y+QYAY R S+F +A +D + ++ E + E LI L ++ Sbjct: 467 FEGNTAPYMQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQF 517 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 +++ +P+ + YL++LA +F + + A + RL+L Sbjct: 518 EEAVQSVAREGQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESIKQSRLKLAAL 571 Query: 566 VASIINSGLNIIGVESPNEM 585 A I GL ++G+++ M Sbjct: 572 TAKTIKQGLALLGIDTLERM 591 >gi|229522032|ref|ZP_04411449.1| arginyl-tRNA synthetase [Vibrio cholerae TM 11079-80] gi|254226080|ref|ZP_04919678.1| arginyl-tRNA synthetase [Vibrio cholerae V51] gi|125621392|gb|EAZ49728.1| arginyl-tRNA synthetase [Vibrio cholerae V51] gi|229340957|gb|EEO05962.1| arginyl-tRNA synthetase [Vibrio cholerae TM 11079-80] Length = 599 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 134/620 (21%), Positives = 234/620 (37%), Gaps = 136/620 (21%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ LG +P A+ ++ + +D IAG GFIN++ Sbjct: 49 LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLDGIASKTEIAGPGFINIF 108 Query: 93 LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 LS +L + + G+ E + ++ ++ + N MHVGH R ++G Sbjct: 109 LSEEFLAAQAEAALADARLGVAQEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIG 161 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188 D + + F G++V R +I D G Q L L F+R + Sbjct: 162 DAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKK 221 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245 LY+ D E A Y +L F E W +V +Q Sbjct: 222 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ------ 261 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---C 302 ++ ++ R + S R+ + + +Y +LP S K Sbjct: 262 ---------------NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAV 302 Query: 303 DMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358 + D Q++F G+ + + K DG + Y D+A K +YE G D ++Y + S Sbjct: 303 EDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDS 362 Query: 359 DHSGYVKRLEAVAAAVSEKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHV 413 ++ + A + K I NV L + L +DG P K RAG + L + Sbjct: 363 RQHQHLMQ----AWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADL 416 Query: 414 VDEVGSDSVRFMMLWRKNSEL-----------LDFDFCKVKEQSKE-------------- 448 +DE + ++ KN EL + K + SK Sbjct: 417 LDEAQERAK--ALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLA 474 Query: 449 ---NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 N Y+QYAY R S+F +A +D + ++ E + E LI L ++ Sbjct: 475 FEGNTAPYMQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQF 525 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 +++ +P+ + YL++LA +F + + A + RL+L Sbjct: 526 EEAVQSVAREGQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESIKQSRLKLAAL 579 Query: 566 VASIINSGLNIIGVESPNEM 585 A I GL ++G+++ M Sbjct: 580 TAKTIKQGLALLGIDTLERM 599 >gi|229552588|ref|ZP_04441313.1| arginine--tRNA ligase [Lactobacillus rhamnosus LMS2-1] gi|258539960|ref|YP_003174459.1| arginyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705] gi|229314140|gb|EEN80113.1| arginine--tRNA ligase [Lactobacillus rhamnosus LMS2-1] gi|257151636|emb|CAR90608.1| Arginyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705] Length = 560 Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 142/589 (24%), Positives = 248/589 (42%), Gaps = 91/589 (15%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P+ G + L++ L P IA +VA+I P + V G G++N Y Sbjct: 27 LVETPKSSDLGDFAF-PTFSLAKILHQAPKMIASDLVAKIDASP-FEQVKAVG-GYVNFY 83 Query: 93 LSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S+ ++L +I SG +G +G+G V I+ S N PM +GH R V+G+ LA Sbjct: 84 LDKISFAHEVLKAIAQSGEHFGDAKLGEGN-VPIDMSSPNIAKPMSMGHLRSTVIGNALA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHV 209 +++ GY + ++ D G Q L ++ +A D +L + Y + Sbjct: 143 NILQKVGYSPIKINHLGDWGTQFGKLIVAYKKWGSEADVKADPIKNLLQYYVKFHEVAET 202 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRD-DLKALNIQHDIFISEDDFH 266 EL D+ + W ++D +A + + R L N + I + D + Sbjct: 203 DPELEDEARA---------WFKRLEDGDKEAITLWRWFRTVSLAEFNRIYKILGVDFDSY 253 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 G+ + D +D++ + E S+ + D+ + L + L+K Sbjct: 254 NGE-AFYNDKMDSVVK---TLEDKHLLKTSQGAEIVDLSKYNL-----------NPALIK 298 Query: 327 SDGSYT-YFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 T Y DLA + E F +YV+G++ + ++L+AV + + A ++ Sbjct: 299 KSDGATLYMTRDLAAAIFRKEHYHFVQSLYVVGNEQREHFQQLKAVLLEMGYEWAN-DIH 357 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------------------------EVGS 419 + +G K+S R G+ I L V+ EVG Sbjct: 358 HIPFGLITANGK--KLSTRRGNIILLEKVLKDAVGLAQQQIDEKHPDLPNAEKVAHEVGV 415 Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 +V F L KN L +FDF V+ + + P YVQY AR SI R+A +I P Sbjct: 416 GAVIFHDL--KNERLDNFDFNLEEVVRFEGETGP--YVQYTNARAHSILRKA-NIAP--- 467 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 P+ + D + ++ L +YP ++ A EP +A Y LA F+ ++ Sbjct: 468 --------APEVALSDPAAWDVLRALGDYPSIVVRAAKEYEPSVIAKYALRLAKAFNKYY 519 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + V + +L RL +V A ++ + L+++GV +P EM Sbjct: 520 ANVK-------VLVEDSELP-ARLAMVSATTQVLENALHLLGVAAPEEM 560 >gi|327484607|gb|AEA79014.1| Arginyl-tRNA synthetase [Vibrio cholerae LMA3894-4] Length = 592 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 134/620 (21%), Positives = 234/620 (37%), Gaps = 136/620 (21%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ LG +P A+ ++ + +D IAG GFIN++ Sbjct: 42 LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLDGIASKTEIAGPGFINIF 101 Query: 93 LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 LS +L + + G+ E + ++ ++ + N MHVGH R ++G Sbjct: 102 LSEEFLAAQAEAALADARLGVAQEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIG 154 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188 D + + F G++V R +I D G Q L L F+R + Sbjct: 155 DAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKK 214 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245 LY+ D E A Y +L F E W +V +Q Sbjct: 215 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ------ 254 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---C 302 ++ ++ R + S R+ + + +Y +LP S K Sbjct: 255 ---------------NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAV 295 Query: 303 DMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358 + D Q++F G+ + + K DG + Y D+A K +YE G D ++Y + S Sbjct: 296 EDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDS 355 Query: 359 DHSGYVKRLEAVAAAVSEKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHV 413 ++ + A + K I NV L + L +DG P K RAG + L + Sbjct: 356 RQHQHLMQ----AWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFKT--RAGGTVRLADL 409 Query: 414 VDEVGSDSVRFMMLWRKNSEL-----------LDFDFCKVKEQSKE-------------- 448 +DE + ++ KN EL + K + SK Sbjct: 410 LDEAQERAK--ALIESKNPELSAEEKAAIANTVAMAAVKYADLSKHRTTDYVFDWDNMLA 467 Query: 449 ---NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 N Y+QYAY R S+F +A +D + ++ E + E LI L ++ Sbjct: 468 FEGNTAPYMQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQF 518 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 +++ +P+ + YL++LA +F + + A + RL+L Sbjct: 519 EEAVQSVAREGQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESIKQSRLKLAAL 572 Query: 566 VASIINSGLNIIGVESPNEM 585 A I GL ++G+++ M Sbjct: 573 TAKTIKQGLALLGIDTLERM 592 >gi|332030674|gb|EGI70362.1| Arginyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior] Length = 684 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 147/613 (23%), Positives = 261/613 (42%), Gaps = 108/613 (17%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGK 86 +++ + G N+AM L++ L + P +A+ I++++K+ ++ IAG Sbjct: 121 VIVTTSTNPKFGDYQCNSAMPLAQQLSSSGFKVSPRDVAKEIMSKLKVSSVIEKYEIAGA 180 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GFIN+YL + + +L + + +G + K +V ++F S N MHVGH R ++ Sbjct: 181 GFINIYLKREFGQSVLRNWLWAGEVLPPYV--KKKRVVVDFSSPNIAKEMHVGHLRSTII 238 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206 GD+++ L+ + G++V R ++ D G Q L + Q N + P P L Sbjct: 239 GDSISRLLEYLGHDVLRLNHVGDWGTQFGMLIAHL----QDKFPNYLTITP----PIEDL 290 Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK--------IIRDDLKALNIQHDI 258 + KE ++ E F + + +VK + + M + R + + + + DI Sbjct: 291 QTFYKESKTRF-DEDEEFKKRAYECVVKLQAFEPNMTKAWKMICDVSRQEFEKVYTRLDI 349 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + E RG+ Q Y+ E I+ +SK + D RK + G Sbjct: 350 KLIE----RGES----------FYQKYM-ESIIQELESKNMLEEDNGRK--IMWGEKHGS 392 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN----MIYVMGSDHSGYVKRLEAVAAAV 374 V ++KSDG +TY +D+A K + E+ + +IYV + S + + +++ A Sbjct: 393 GVPLTIVKSDGGFTYDTSDMACIKYRIEKERADWASILIYVTDAGQSLHFQIIKSCA--- 449 Query: 375 SEKKAQINVLLCELVRLYRDGMPI-------KMSKRAGDFITLRHVVDE----------- 416 K+A I L R+ G K R+GD + L ++DE Sbjct: 450 --KRAGI---LKSFHRMDHVGFGAVLGEDKKKFKTRSGDTVKLSELLDEGLKRALQKLKE 504 Query: 417 -------------VGSDSVRFM------MLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457 +SV + +L +N E + F F K+ E K N Y+ YA Sbjct: 505 KERDKVLSQEELKAAQESVAYGCIKYADLLHNRNHEYV-FSFDKMLE-DKGNTAVYLLYA 562 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPR-NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 R RSI R A +I D +L R + +P E + E +L L ++P VI T Sbjct: 563 LTRIRSIARTA-NITKD---ELRQRSHEVPISLEHE-KEWKLAKVLLKFPDVILGVTEDL 617 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR----KLTMMRLQLVHAVASIINS 572 L + Y+++ F + + V+ + K+ M RL L+ A A I+ Sbjct: 618 YLNPLCEFCYEVSCAFTEFYD------KCYCVEKDQSGEIVKINMGRLLLMEATALILEK 671 Query: 573 GLNIIGVESPNEM 585 +++G++S +M Sbjct: 672 CFSLLGLKSVAQM 684 >gi|26991765|ref|NP_747190.1| arginyl-tRNA synthetase [Pseudomonas putida KT2440] gi|38258317|sp|Q88CU1|SYR_PSEPK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|24986874|gb|AAN70654.1|AE016709_6 arginyl-tRNA synthetase [Pseudomonas putida KT2440] Length = 578 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 1/146 (0%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE ++ + D+ V IAG GF+N Sbjct: 30 IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLINALPASADISKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + L L + + G G KV I+ + N MHVGH R ++GD++A Sbjct: 90 FQNTDALANRLDAALADA-HLGARKAGPAQKVVIDMSAPNLAKEMHVGHLRSTIIGDSVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177 ++ F G V R+ ++ D G Q L Sbjct: 149 RVLEFLGDNVIRQNHVGDWGTQFGML 174 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 19/155 (12%) Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 LRH+ + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 419 LRHIGEVVGIGAVKYADLSKHRTSDYSFNF-ELMLNFEGNTAPYLLYAYTRVAGVFRKLG 477 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 F ++D ++ Q + E L LA++ ++ N P+ L YLYDLA Sbjct: 478 KGFDEVD-----GKIVLQAAH----EQDLAARLAQFGEILNNVAEKGTPHVLCSYLYDLA 528 Query: 530 SVFHGHWSH---------GRENPRLRFVQANNRKL 555 +F + + ++ RLR R L Sbjct: 529 GLFSSFYENCPILAAETPSQQQSRLRLAALTGRTL 563 >gi|148550164|ref|YP_001270266.1| arginyl-tRNA synthetase [Pseudomonas putida F1] gi|166232825|sp|A5WAC2|SYR_PSEP1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|148514222|gb|ABQ81082.1| arginyl-tRNA synthetase [Pseudomonas putida F1] Length = 578 Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 1/146 (0%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE ++ + D+ V IAG GF+N Sbjct: 30 IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLINALPASADISKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + L L + + G G KV I+ + N MHVGH R ++GD++A Sbjct: 90 FQNTDALANRLDAALADA-HLGARKAGPAQKVVIDMSAPNLAKEMHVGHLRSTIIGDSVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177 ++ F G V R+ ++ D G Q L Sbjct: 149 RVLEFLGDNVIRQNHVGDWGTQFGML 174 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 19/155 (12%) Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 LRH+ + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 419 LRHIGEVVGIGAVKYADLSKHRTSDYSFNF-ELMLNFEGNTAPYLLYAYTRVAGVFRKLG 477 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 F ++D + V+ E D L LA++ ++ N P+ L YLYDLA Sbjct: 478 KGFDEVDGKI----VLHAAHEQD-----LAARLAQFGEILNNVAEKGTPHVLCSYLYDLA 528 Query: 530 SVFHGHWSH---------GRENPRLRFVQANNRKL 555 +F + + ++ RLR R L Sbjct: 529 GLFSSFYENCPILAAETPSQQQSRLRLAALTGRTL 563 >gi|225352870|ref|ZP_03743893.1| hypothetical protein BIFPSEUDO_04506 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156297|gb|EEG69866.1| hypothetical protein BIFPSEUDO_04506 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 124 Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 46/104 (44%), Positives = 72/104 (69%), Gaps = 4/104 (3%) Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYVKRL 367 F ST GDD DR ++KSDG+Y YFAAD+AY++ K R D IY++G+DH GY+ R+ Sbjct: 18 FESTKHGDDKDRVIIKSDGNYAYFAADIAYYRNKRHRDNDPADIAIYMLGADHHGYIGRM 77 Query: 368 EAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITL 410 A+ AA ++ + + +L+ +LV + +DG ++MSKRAG+ +T+ Sbjct: 78 MAMCAAFGDEPGENMQILIGQLVNVLKDGKAVRMSKRAGNVVTI 121 >gi|309805389|ref|ZP_07699438.1| arginine--tRNA ligase [Lactobacillus iners LactinV 09V1-c] gi|308165316|gb|EFO67550.1| arginine--tRNA ligase [Lactobacillus iners LactinV 09V1-c] Length = 558 Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 139/599 (23%), Positives = 249/599 (41%), Gaps = 111/599 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IERP++ G + L++ +P IA + A++ ++ + + G +IN Sbjct: 25 LIERPKNVKLGDYAF-PTFALAKIEHKNPAVIASELAAKL-VNDNFAEIEAVGP-YINFA 81 Query: 93 LSPSYLRKI-LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + L + L ++ +YG +G V I+ S N PM +GH R V+G+++A Sbjct: 82 IDHAKLVSVTLKKVLADQDKYGDQDNNQGN-VPIDMSSPNIAKPMSMGHLRSTVIGNSIA 140 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVY----- 205 ++ G+ + Y+ D G Q L + W ++A+ + YY + Sbjct: 141 KILQKIGFTPIKINYLGDYGTQFGKLITAYKLWGNEEAVKKDPITNLFHYYVKFHEEAEK 200 Query: 206 ---LKHVGK------ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 L+ G+ E D + EL +W ++ S+Q +I ++ L + Sbjct: 201 DPKLEDEGRAWFKKLEEGDAEAVELW-----QWF---REVSLQEFNRIYKE----LGVTF 248 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D + E F+ ++ ++D L + ++E S+ Q D+D Sbjct: 249 DSYNGEAFFN----DKMQPVVDELRAKNLLHE-------SRGAQVVDLD----------- 286 Query: 317 GDDVDRPL-LKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374 DD + L LKSDG+ Y DL A K E F +YV G++ SG+ K+L+ V + Sbjct: 287 -DDENPALILKSDGTSLYITRDLAAALYRKKEYAFAMSLYVAGNEQSGHFKQLKQVLGKM 345 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL------------------------ 410 Q ++ + ++G K+S R G+ + L Sbjct: 346 G-YDWQKDIHHIPFGLITQNGK--KLSTRKGNVVFLDNVLKDAVKLALEQIEAKNPNLAN 402 Query: 411 -RHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFR 466 V +VG +V F L KN L +FDF V+ + P YVQY AR +SI R Sbjct: 403 KEQVAHQVGVGAVIFHDL--KNERLDNFDFNLNEVVRFEGDTGP--YVQYTNARAQSILR 458 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 + D L D + +A++P +I+ A EP +A Y Sbjct: 459 KVNVEIDDTKLAL-----------SDDWAFAVAKDIADFPAIIQKAFEKFEPSVIAKYSL 507 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +L+ F+ ++++ +R + ++ RL LV A + ++ L ++GV++P EM Sbjct: 508 NLSKKFNKYYAN------VRILNQDDE--LNARLALVQATSIVLTESLRLLGVDAPKEM 558 >gi|188588753|ref|YP_001921709.1| arginyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43] gi|238691964|sp|B2UW74|SYR_CLOBA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|188499034|gb|ACD52170.1| arginyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43] Length = 563 Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 127/539 (23%), Positives = 227/539 (42%), Gaps = 93/539 (17%) Query: 88 FINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N ++ + ++ I+ G YG + IG+G V +E+ S N P HVGH + Sbjct: 77 YLNFFVDKGVFAENTINKILKDGDSYGESNIGEGKTVCVEYSSPNIAKPFHVGHLFTTAI 136 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYYPGV 204 G++L + GY+V ++ D G Q L +S + W ++AL P + Sbjct: 137 GNSLYKMFKKEGYDVVGLNHLGDWGTQFGKL-ISAYNRWVDEEAL----EKAPIDELLRI 191 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVK----DYSVQAMMKIIRD-DLKALNIQHDIF 259 Y+K + A+K S +E + K D QA+ K RD LK +DI Sbjct: 192 YVKF--HDEAEKDPS----LEDEGRMYFKKLETGDAEAQALWKRFRDLSLKEFERVYDIL 245 Query: 260 ISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 + D G+ + +++ L +G + E S Q ++ Sbjct: 246 GVKFDSLAGEAFYNDKMDVVVNELKDKGLLVE-------SNGAQ-------------VVM 285 Query: 317 GDDVDRP---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 DD + P +LK DG+ Y DLA Y K Y+ F IYV+GS + + K++ V Sbjct: 286 LDDYNMPPCIVLKGDGASIYATRDLAAAMYRKKTYD--FYKSIYVVGSPQALHFKQVFKV 343 Query: 371 AA-----------------------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407 +S +K ++ VLL +L+R + ++++ + Sbjct: 344 LELAGHEWANDCVHVGFGLVKFADRKLSTRKGEV-VLLDDLIRESVEKTLEVINEKNPEL 402 Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFR 466 V ++G ++ F L + + FD+ ++ + + P YVQY+YAR SI Sbjct: 403 ENKEEVAKKIGVGAIIFTYLKNSREKDIVFDWKEILSFEGETGP--YVQYSYARANSIIS 460 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 +A++I ++D+ E +L+ LA + I+ AT EP L Y+ Sbjct: 461 RAENISSEVDYSKLSSK----------EEFELVKVLANFNNQIKLATDKLEPSILTRYVI 510 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 D+A F+ ++ + ++ L RL LV + +I +GL ++G++ +M Sbjct: 511 DVAKSFNKFYNAH------SVLNLDDEVLKATRLSLVKSSLQVIKNGLELLGIDVVEKM 563 >gi|168178492|ref|ZP_02613156.1| arginyl-tRNA synthetase [Clostridium botulinum NCTC 2916] gi|182670923|gb|EDT82897.1| arginyl-tRNA synthetase [Clostridium botulinum NCTC 2916] Length = 563 Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 134/576 (23%), Positives = 248/576 (43%), Gaps = 99/576 (17%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIE 111 L++ P IAE + +I + + V G ++N ++ + L K +L ++ + Sbjct: 44 LAKTFRKAPNLIAEELKEKINKEG-FEKVVTVGP-YLNFFVDKTILIKDVLEKVLSEKEK 101 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG + +G+G V +E+ S N P H+GH +G+ L +++F GY ++ D G Sbjct: 102 YGSSKVGEGKNVVVEYSSPNIAKPFHIGHLFTTAIGNALYKILSFQGYNCIGINHLGDWG 161 Query: 172 AQINTLALSVF--WRYQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSEL-LNFPEE 227 Q L +S + W ++AL + G +Y+K H E + E LNF Sbjct: 162 TQFGKL-ISAYRRWVDEEALEKD----AIGELLRIYVKFHEEAEKDPELEKEARLNF--- 213 Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287 K L + + LK N +D+ + D G+ S D +D + ++ Sbjct: 214 KRLEEGSKEETELWNRFKNLSLKEFNKVYDMLGIKFDSLAGE-SFYSDKMDAVVQE---- 268 Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRP---LLKSDGSYTYFAADLA- 339 +D K LL S ++ D+ + P + KSDG+ Y DLA Sbjct: 269 ----------------IDDKGLLVDSNGAKVVMLDEYNMPPCMIKKSDGATIYATRDLAA 312 Query: 340 --YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGM 396 Y K Y+ F IYV+G+ + + K++ + A + LV+L Sbjct: 313 AIYRKKTYD--FHKCIYVVGTPQALHFKQVFTTLKLMGHDWADDCKHVGFGLVKLANK-- 368 Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD------------FCKVKE 444 K+S R GD + L ++++ ++++ ++ KN L + + F +K Sbjct: 369 --KLSTRNGDVVFLEDLLNQSVEETLK--IINEKNPNLKNKEDVAKKLGIGAVVFTYLKN 424 Query: 445 QSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490 + + VF YV+Y+YAR +SI R+A ++ + D+ + + + E Sbjct: 425 NRERDIVFDWKEILSFDGETGPYVEYSYARGKSILRKAGELTGEADY-----SKLSSKEE 479 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-SHGRENPRLRFVQ 549 F+ ++L L + I NA EP + Y+ ++A F+ + +HG + Sbjct: 480 FELAKL-----LGGFNDAIMNAIDKLEPAMVTRYVIEVAKAFNKFYNAHG-------ILN 527 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A + + + R++LV A +I + LN++G++ EM Sbjct: 528 AEDNDVKLARVKLVEATCQVIKNALNLLGIDVVEEM 563 >gi|332881403|ref|ZP_08449053.1| arginine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680779|gb|EGJ53726.1| arginine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 599 Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 131/568 (23%), Positives = 236/568 (41%), Gaps = 98/568 (17%) Query: 76 PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTG 134 P V + F A KGF+NL ++P+ +L+ I ++G V IE+ S N Sbjct: 72 PSVVADFNAVKGFLNLVIAPASWIGLLTDIHQDA-QFGLTEATDHSPLVMIEYSSPNTNK 130 Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS 194 P+H+GH R ++G LA++MA +G V + +ND G I L+ + +Y + Sbjct: 131 PLHLGHVRNNLLGCALANIMAANGNRVVKTNIVNDRGIHICKSMLA-WLKYGNGATPEST 189 Query: 195 DLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD-- 248 + + G Y KH +++ + + + P++K+ + + ++K +D Sbjct: 190 GIKGDHLIGDYYVAFDKHYKEQIKELMEEGMSEEEAKNEAPLIKE-AREMLVKWENNDPE 248 Query: 249 LKAL--NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-EGILPPPKSKTTQKCDMD 305 ++AL + ++ D ++ + D + + Y EG K K + D Sbjct: 249 VRALWRKMNEWVYAGFDVTYKA----LGVSFDKIYYESETYLEG-----KEKVLEGLD-- 297 Query: 306 RKQLLFRS---------TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355 K L FR T G D ++ LL+SDG+ Y D+ K ++ + D MIYV Sbjct: 298 -KGLFFRKEDGSVWADLTPEGLD-EKLLLRSDGTSVYMTQDIGTAKLRFRDYPIDKMIYV 355 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 +G++ + + + L + + + + V + +G KM R G + +V Sbjct: 356 VGNEQNYHFQVLSILLDKLGFEWGKDLVHFSYGMVELPNG---KMKSREGTVVDADDLVA 412 Query: 416 E------------------------------VGSDSVRFMML---WRKN-----SELLDF 437 E VG ++++ +L RKN +E +DF Sbjct: 413 EMIGSARKMSEDKINKLTDLSEDEANEIARIVGLGALKYFILKVDARKNMLFNPAESIDF 472 Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497 + N ++QY YAR RSI R+A + + P + Q ++ E+ Sbjct: 473 N---------GNTGPFIQYTYARIRSILRKASEAGISI-----PETLSAQ-TDLSEKEIS 517 Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557 LI LA++P V++ A P +A Y YDL ++ + + N Sbjct: 518 LIQMLADFPNVVKQAGSDYNPSCIANYCYDLVKEYNQFYHD------FSILHEENENKKT 571 Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L ++ II +G+ ++G+E P M Sbjct: 572 FRLVLSAEISKIIRTGMGLLGIEVPERM 599 >gi|218131430|ref|ZP_03460234.1| hypothetical protein BACEGG_03048 [Bacteroides eggerthii DSM 20697] gi|217986362|gb|EEC52699.1| hypothetical protein BACEGG_03048 [Bacteroides eggerthii DSM 20697] Length = 605 Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 143/633 (22%), Positives = 259/633 (40%), Gaps = 132/633 (20%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 ++ +++ + GHL+ L R P A+ I ++ + S F KGF+N Sbjct: 27 QVQLQKTKKEFEGHLTLVVFPFL-RMSKKGPEQTAQEIGEYLQANEPSVSTFNVIKGFLN 85 Query: 91 LYLSPSYLRKILSSIVVSGIEYGR-NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 L ++ S ++L+ I +YG + K V IE+ S N P+H+GH R ++G+ Sbjct: 86 LTIASSAWIELLNGIHADA-QYGVVSATDKSPLVMIEYSSPNTNKPLHLGHVRNNLLGNA 144 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE----------G 199 LA+++A +G +V + +ND G I L+ W L + + PE G Sbjct: 145 LANIIAANGNKVVKTNIVNDRGIHICKSMLA--W-----LKYGNGETPETSGKKGDHLIG 197 Query: 200 YYPGVYLKHVG---KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD--------- 247 Y + KH KEL K+ E L+ E K K S +MK R+ Sbjct: 198 DYYVAFDKHYKAEVKELMAKFQGEGLSEEEAK----AKAESESPLMKEAREMLVKWEAND 253 Query: 248 -DLKAL--NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-EGILPPPKSKTTQKCD 303 +++AL + +++ D+ +R + D + + Y EG K K + + Sbjct: 254 PEVRALWKKMNDWVYVGFDETYR----MMGVTFDKIYYESETYLEG-----KEKVMEGLE 304 Query: 304 MDRKQLLFR-------STMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354 K +R + + G+ +D + LL++DG+ Y D+ K ++ + D MIY Sbjct: 305 ---KGFFYRKEDGSVWADLTGEGLDHKLLLRADGTSVYMTQDIGTAKLRFADFPIDKMIY 361 Query: 355 VMGSDHS--------------------------GYVKRLEAVAAAVSEKKAQINVLLCEL 388 V+G++ + G V+ E + + L+ E+ Sbjct: 362 VVGNEQNYHFQVLSILLDKLGFDWGKGLVHFSYGMVELPEGKMKSREGTVVDADDLMAEM 421 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDE--------VGSDSVRFMML---WRKN-----S 432 + ++ +G+ L + E VG ++++ +L RKN Sbjct: 422 INTAKE--------TSGELGKLDGLTQEEADNIARIVGLGALKYFILKVDARKNMTFNPK 473 Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492 E +DF+ N ++QY YAR +S+ R+AK+ + L P E Sbjct: 474 ESIDFN---------GNTGPFIQYTYARIQSVLRKAKEAGITVPAQL------PLGIELS 518 Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552 E LI +A++ V++ A P +A Y YDL ++ + ++ N Sbjct: 519 EKEEGLIQMIADFATVVKQAGEDYSPSLIANYTYDLVKEYNQFYHD------FSILREEN 572 Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + RL L VA ++ G+ ++G+E P+ M Sbjct: 573 EAVKIFRLALSENVAKVVRLGMGLLGIEVPDRM 605 >gi|269138777|ref|YP_003295478.1| arginyl-tRNA synthetase [Edwardsiella tarda EIB202] gi|267984438|gb|ACY84267.1| arginyl-tRNA synthetase [Edwardsiella tarda EIB202] gi|304558769|gb|ADM41433.1| Arginyl-tRNA synthetase [Edwardsiella tarda FL6-60] Length = 577 Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 135/591 (22%), Positives = 240/591 (40%), Gaps = 98/591 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ +GL P +AE +VA + +D V IAG GFIN++L ++L Sbjct: 37 GDYQANGIMAAAKKMGLPPRQLAEQVVANLALDGIASKVEIAGPGFINIFLDAAWLAAQA 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + + G + T V +++ + N MHVGH R ++GD + F G+ V Sbjct: 97 DAALAD-PRLGVARVEPQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220 R ++ D G Q L ++ + Q + D L E +Y A K+ E Sbjct: 155 RANHVGDWGTQFGML-IAYLEKVQGSSKTGDMALADLEAFY----------REAKKHYDE 203 Query: 221 LLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHD---IFISEDDFHRGDP-- 270 F E +VK +Y + K++ ++ +D + +++DD G+ Sbjct: 204 DAAFAERARGYVVKLQGGDEYCREMWRKLVDITMRQNQRNYDRLNVTLTDDDVM-GESLY 262 Query: 271 SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 +P + I+ +L +G E S+ +D F++ G+ + + K DG Sbjct: 263 NPMLPGIVADLKAKGLATE-------SEGATVVFLDE----FKNKE-GEPMGVIVQKKDG 310 Query: 330 SYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQI 381 Y Y D+A K +YE G + ++Y + S + V++ V +VS + Sbjct: 311 GYLYTTTDIACAKYRYETLGANRILYYIDSRQHQHLMQAWAIVRKAGYVPDSVSLEHHMF 370 Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------- 416 ++L +DG P K RAG I L ++DE Sbjct: 371 GMMLG------KDGKPFK--TRAGGTIKLADLLDEAIERAAKLIAAKNPELSGDELKALV 422 Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 VG +V++ L + + FD+ + + N Y+QYAY R SIF++A Sbjct: 423 EVVGIGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVASIFKRA-----G 476 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 +D + + E E L L ++ I + P+ + YLY++A +F Sbjct: 477 IDENALQGAITLTEDR----EKALATRLMQFEETILSVAREGTPHVMCAYLYEVAGLFSS 532 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + A+ + RL+L A + +GL+ +G+++ M Sbjct: 533 FYEA------CPILNADEESVCASRLKLAALTARTLKTGLDTLGIKTVERM 577 >gi|218134083|ref|ZP_03462887.1| hypothetical protein BACPEC_01973 [Bacteroides pectinophilus ATCC 43243] gi|217991458|gb|EEC57464.1| hypothetical protein BACPEC_01973 [Bacteroides pectinophilus ATCC 43243] Length = 588 Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 137/612 (22%), Positives = 246/612 (40%), Gaps = 112/612 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 V RP C + N AM ++ P IA+ + A++ + V GFINL Sbjct: 30 VSNRPDLCEY---QCNGAMAAAKAYKKAPFMIADDVAAKLAGSEVFEKVESVKPGFINLS 86 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L +L+ L+ + +YG + GK V +++ AN P+HVGH R AV+G+++ Sbjct: 87 LGGEFLKNYLADMAKDD-KYGYSNAGKEKTVIVDYGGANAAKPLHVGHLRSAVIGESIKR 145 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG-- 210 + F+G +V + ++ D G Q+ + + R + +Y +++ Y G Y K Sbjct: 146 IQRFAGNKVIGDVHLGDWGLQMGLIIEELRDRKPELVYFDEN------YKGEYPKEAPFT 199 Query: 211 -KELADKY------SSELLNFPEEKWLPIVK----DYSVQAM----MKIIRDDLKA---- 251 EL + Y S E F E L K D + A+ M + + DLK Sbjct: 200 ISELEEIYPAASAKSKEDPAFMERAHLATAKLQNGDPACTAIWNHIMAVSKADLKKNYDN 259 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDN---LARQGYVYEGILPPPKSKTTQKCDMDRKQ 308 L++ D++ E D P I+ +ID+ QG + I +K C Sbjct: 260 LDVTFDLWKGESDAQPYIPDMIQKMIDDGIAHESQGAIVVDIQEETDTKELPPC------ 313 Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368 + KSDG+ Y +DLA + E+ + Y+ +D + L Sbjct: 314 --------------IVRKSDGAALYATSDLATL-VEREKLYSPDAYIYLADKR---QELH 355 Query: 369 AVAAAVSEKKAQINVLLCELVRLY------RDGMPIKMSKRAGDFITLRHVVDEV----- 417 + KKA I ++ L +DG P K R+G + L+++++++ Sbjct: 356 FTQVFRTAKKAGIVPQDADMTFLGFGTMNGKDGKPFKT--RSGGVMRLQYLIEDIDKAVY 413 Query: 418 --GSDSVRFMMLWRKNSE----LLDFDFCKVKEQSKENPVF--------------YVQYA 457 S++ KN+ L + + Q+ ++ VF Y+ Y Sbjct: 414 EKSSENRSMSEEEAKNTAKIVGLAALKYGDLSNQASKDYVFDIDRFTSFEGNTGPYILYT 473 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT----SELQLIVHLAEYPRVIENAT 513 R +SIF + + P+E DT SE +L++ L ++ V E+A Sbjct: 474 VVRIKSIFNKYAE-----------NGGRPEECSIDTAKNASEKKLMLSLVKFNEVFESAY 522 Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573 P+KL ++Y++A F G + + + K + L+ +++ Sbjct: 523 KDNAPHKLCQFIYEVADAFGGFYHD------TMILAETDEKKKQGYIALLGLTRNVLECC 576 Query: 574 LNIIGVESPNEM 585 L+++G+ +P M Sbjct: 577 LDLLGIRTPERM 588 >gi|42523502|ref|NP_968882.1| hypothetical protein Bd2027 [Bdellovibrio bacteriovorus HD100] gi|81617243|sp|Q6MLI2|SYR_BDEBA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|39575708|emb|CAE79875.1| argS [Bdellovibrio bacteriovorus HD100] Length = 580 Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 127/572 (22%), Positives = 223/572 (38%), Gaps = 83/572 (14%) Query: 52 ILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE 111 IL++ L P +A + A++K + +A +IN+ + + + ++ G Sbjct: 54 ILAKALKTAPPQVATAVAAQMK-----GATAVAAGPYINIRFDEQTHGEQVLATILDGSY 108 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 + + L+ K K IE+ N +HVGH R +GD + ++ +SG E+ + D G Sbjct: 109 FKKPLMEKSPKTMIEYSQPNTHKELHVGHMRNLCLGDAIVRMLRYSGREIVSSTFPGDMG 168 Query: 172 AQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231 + W ++ +N +PE G+ L YS L ++ P Sbjct: 169 THV----AKCLWYMKK---HNQEPVPE--------TEKGEWLGRMYSKANLLLEDQNGTP 213 Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291 +D + Q + I+ +D+++ ++ + D + Y +E + Sbjct: 214 -QEDINRQELTAILHQLEGKTGPYYDLWLETREWSIELMKKVYAWADVTFDEWY-FESEM 271 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP------LLKSDGSYTYFAADLAYFKCKY 345 P + ++ + K L +G D++ LLKSDG+ Y DL K K+ Sbjct: 272 DSPSAAWVKQLYAEGK-LEMSQGAIGKDLESEKLGFCMLLKSDGTGLYATKDLLLAKHKF 330 Query: 346 ER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404 E + +YV+ + + K++ V + ++A+ L DG MS R Sbjct: 331 EDVKIEKSVYVVDMRQALHFKQVFRVLEILGFEQAKNCFHLQYNYVELPDG---AMSSRK 387 Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY----------- 453 G+ + LR +V + D V+ L R E + D K+ Q + +FY Sbjct: 388 GNIVPLRELVHRM-EDHVKTTYLSRYKGEWSEEDVEKIAGQVAKGAIFYGMLRMDTNKKI 446 Query: 454 -----------------VQYAYARCRSIFRQAKDIFPDLDFDLFPRNV---IPQESEFDT 493 VQY+YAR S+ R+ FPR I Sbjct: 447 VFDMNEWLKLDGESGPFVQYSYARISSLGRK------------FPRTAGAKIDWSRLNHA 494 Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553 SE QL+ L + + A +P + YLYDLA F+ + E P R Sbjct: 495 SERQLMQSLGGFNTAVAAAAENFKPSAICTYLYDLAKSFNVFY---HECPIGTEADVATR 551 Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL L AV + +GL ++G+ +P +M Sbjct: 552 E---ARLALSEAVGLTLKNGLAVLGMPAPEKM 580 >gi|317968164|ref|ZP_07969554.1| arginyl-tRNA synthetase [Synechococcus sp. CB0205] Length = 594 Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 136/544 (25%), Positives = 215/544 (39%), Gaps = 90/544 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98 G N A+ L++PLG P IAE +V ++K D +V IAG GFIN+ L P L Sbjct: 43 GDFQANGALPLAKPLGQPPRKIAEAVVEQLKADESFMAVCQAPQIAGPGFINITLQPERL 102 Query: 99 RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158 + + G + + V ++F S N MHVGH R ++GD+LA ++ F G Sbjct: 103 AAEVQQ-RLGDARLGVPAVEQAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRG 161 Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKY 217 + V R ++ D G Q L + +AL D+ DL +L Y Sbjct: 162 HPVLRLNHVGDWGTQFGMLITHLKQVAPEALETADAVDL--------------GDLVAFY 207 Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277 F E++ V + LKA + D S +F + I D + Sbjct: 208 REAKKRFDEDEAFQTTSREEVVKLQGGDPVSLKAWGLLCD--QSRREFQK-----IYDRL 260 Query: 278 D-NLARQGYVY-----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL----LKS 327 D L+ +G + EG++ ++ D D +F + G D +PL KS Sbjct: 261 DIRLSERGESFYNPYLEGVVRDLEATGLLVVD-DGAGCVFLEGVSGKD-GKPLPVIVQKS 318 Query: 328 DGSYTYFAADLAYFKCKYER-----GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQ 380 DG + Y DLA + ++ G ++YV + + + + VA A + A+ Sbjct: 319 DGGFNYATTDLAAIRYRFGSAPEGDGARRVVYVTDAGQANHFAGVFQVARRAGWLPEGAR 378 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLR----------------------------- 411 + + LV+ DG K+ RAGD + LR Sbjct: 379 LEHVPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVERSEADLRRRLEEEGRSEDEAF 435 Query: 412 --HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 HV + VG +V++ L + F F ++ + N Y+ YA R I R+ Sbjct: 436 IAHVANTVGLAAVKYADLSQNRITNYQFSFDRML-ALQGNTAPYLLYAVVRIAGIARKGG 494 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 D+ L Q SE E L+ L ++ VI P +L YL++L+ Sbjct: 495 DLDAASTGGL-------QFSE--PQEWALVRELLKFDAVIAEVEEELLPNRLCTYLFELS 545 Query: 530 SVFH 533 VF+ Sbjct: 546 QVFN 549 >gi|260589619|ref|ZP_05855532.1| arginine--tRNA ligase [Blautia hansenii DSM 20583] gi|260539859|gb|EEX20428.1| arginine--tRNA ligase [Blautia hansenii DSM 20583] Length = 588 Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 133/631 (21%), Positives = 261/631 (41%), Gaps = 104/631 (16%) Query: 10 RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69 +++ +KE + ++K V RP C + N AM ++ P+ IA +V Sbjct: 7 KIEEAVKEAFAASEYDEKFAKVTVSNRPDLCEY---QCNGAMAAAKTYKKAPIMIANSVV 63 Query: 70 ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIE 126 +++ + +S GFINL L+ +L L+ ++ +E +N + I+ Sbjct: 64 EKLQDNEIFESAEAVNPGFINLKLNKEFLSGYLNDMLADEKLSVEEAKN----PKTIVID 119 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 + N P+HVGH R A++G+++ + F G++V + ++ D G Q+ + + R Sbjct: 120 YGGPNVAKPLHVGHLRSAIIGESIKRMGRFLGHKVIGDVHLGDWGLQMGLIITELSKRQP 179 Query: 187 QALYNNDSDLPEGYYPG-----------VYLKHVGKELADK-YSSELLNFPEEKWLPIVK 234 +Y +++ EG YP +Y GK D+ Y +E L E L + K Sbjct: 180 DLVYFDEN--YEGEYPKEAPFTVSELEEIYPTASGKSKEDEAYKNEAL----EATLQLQK 233 Query: 235 ---DYSV--QAMMKIIRDDLK----ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285 Y Q +M++ DLK L + D++ E D P+ ++D L GY Sbjct: 234 GRRGYRALWQHIMEVSVTDLKKNYAKLKVDFDLWKGEADADAYIPA----MVDYLKENGY 289 Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFK 342 Y +D+ L+ D + P +LKSDG+ Y DLA Sbjct: 290 AY----------------LDQGALVVDVKEETDTKEIPPCMILKSDGASLYNTTDLATIV 333 Query: 343 CKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRLYRDGMPIK 399 + E D +IYV+ + ++ A A + ++ Q++ + + +DG P K Sbjct: 334 QRMEDYKPDEIIYVVDKRQELHFVQVFRCAKKAKLVDENTQLSFVGFGTMN-GKDGKPFK 392 Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWR----KNSE-------LLDFDFCKVKEQSKE 448 R G + L ++ E+ + + + R +N+E L + + Q+ + Sbjct: 393 T--REGGVMRLERLIAEINEEMFKKITENRSVKDENAEKTAQMVGLSAIKYGDLSNQASK 450 Query: 449 NPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494 + VF Y+ Y R +SI + + ++D V + S Sbjct: 451 DYVFDIERFTSFEGNTGPYILYTIVRIKSILSRYAESGKNIDKKAMKAAV-------NDS 503 Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554 E L++ L+ + +I A + P+++ Y+YDLA+ F+ + + + + Sbjct: 504 EKALMLELSRFNSIIAPAFEEKAPHRICSYIYDLANAFNSFYHE------TKILSEEDED 557 Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L+ ++ + ++++G ++P+ M Sbjct: 558 KKASWICLLTLTEKVLETCIDLLGFDAPDRM 588 >gi|328773748|gb|EGF83785.1| hypothetical protein BATDEDRAFT_84510 [Batrachochytrium dendrobatidis JAM81] Length = 780 Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 139/597 (23%), Positives = 244/597 (40%), Gaps = 94/597 (15%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E PRD A+G +S + +R G+ P +A + + + + + G F+N Sbjct: 234 LLEEPRDKANGDMSL--PLPRTRLPGI-PTQLAASLAKQFQPNNLILKAVATGP-FLNFT 289 Query: 93 LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + L +K++SS V G YG N G G +EF S N P H GH R ++G L Sbjct: 290 FNKAILSKKVISSAVTLGTSYGSNSDGFGKFAVVEFSSPNIAKPFHAGHLRSTIIGSFLK 349 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGVYLKHV 209 +++ SG+ Y+ D G Q LA+ F RY +AL + P + VY++ Sbjct: 350 NVLDVSGWSTVSINYLGDWGKQFGLLAVG-FDRYGSDEALSTD----PIRHLYDVYVRIN 404 Query: 210 GKELAD--------KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 + + D Y ++ + E + + K + +++K ++ LN+ DI+ Sbjct: 405 TEAIEDASIHDQARAYFKKMEDGDEHAY-NLWKRFRDLSIVK-YKEVYGRLNVHFDIYSG 462 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E + S +R +++ L G+L P + +D K+ ++G Sbjct: 463 ESQYSL---SQMRSVMNELQNV-----GLLVPDQGALI----VDLKEYKLGVAVIG---- 506 Query: 322 RPLLKSDGSYTYFAADLAYFKC--KYERGFDNMIYVMGSDHSGYVKRL------------ 367 K+DGS Y + D+A C K FD+M YV+G+ + K+L Sbjct: 507 ----KTDGSLLYLSRDIAA-ACDRKDTFDFDHMFYVVGTQQDHHFKQLFKILELQGKTWV 561 Query: 368 -----------EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL---RHV 413 ++ +S ++ + V L +++ RD M M K + + V Sbjct: 562 DRCSHIGFGLIKSKDGNMSTRRGTV-VFLEDILNTVRDEMHANMKKNEHKYAQVVDPERV 620 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIF 472 D VG + + + ++ FD+ ++ + P Y+QYA++R SI RQ++ Sbjct: 621 ADIVGQSATMIQDMGARRAKDYTFDWSRIFSFEGDTGP--YLQYAHSRLCSIERQSE--- 675 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY----LYDL 528 L I + L LI +A YP VI + + EP L Y + + Sbjct: 676 -HLQVSADTLLDIDLTLLVEPQALALIEAIALYPDVIRDLSKNYEPCNLVSYSLRLSHAI 734 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +S W G+E P L RL L A +++ L +G+ M Sbjct: 735 SSAIDVLWVSGQEKP-----------LAHARLALYVAARFALSNALRTLGLTPLTRM 780 >gi|153213687|ref|ZP_01948939.1| arginyl-tRNA synthetase [Vibrio cholerae 1587] gi|153801962|ref|ZP_01956548.1| arginyl-tRNA synthetase [Vibrio cholerae MZO-3] gi|124115748|gb|EAY34568.1| arginyl-tRNA synthetase [Vibrio cholerae 1587] gi|124122476|gb|EAY41219.1| arginyl-tRNA synthetase [Vibrio cholerae MZO-3] Length = 599 Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 132/619 (21%), Positives = 235/619 (37%), Gaps = 134/619 (21%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ LG +P A+ ++ + +D IAG GFIN++ Sbjct: 49 LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLDGIASKTEIAGPGFINIF 108 Query: 93 LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 LS +L + + G+ E + ++ ++ + N MHVGH R ++G Sbjct: 109 LSEEFLAAQAEAALADARLGVAQEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIG 161 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188 D + + F G++V R +I D G Q L L F+R + Sbjct: 162 DAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKK 221 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245 LY+ D E A Y +L F E W +V +Q Sbjct: 222 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ------ 261 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---C 302 ++ ++ R + S R+ + + +Y +LP S K Sbjct: 262 ---------------NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAV 302 Query: 303 DMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358 + D Q++F G+ + + K DG + Y D+A K +YE G D ++Y + S Sbjct: 303 EDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDS 362 Query: 359 DHSGYVKRLEAVAAAVSEKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHV 413 ++ + A + K I NV L + L +DG P K RAG + L + Sbjct: 363 RQHQHLMQ----AWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADL 416 Query: 414 VDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446 +DE V +V++ L + + FD+ + Sbjct: 417 LDEAQERAKALIESKNLELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AF 475 Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 + N Y+QYAY R S+F +A +D + ++ E + E LI L ++ Sbjct: 476 EGNTAPYMQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQFE 526 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 +++ +P+ + YL++LA +F + + A + RL+L Sbjct: 527 EAVQSVAREGQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESIKQSRLKLAALT 580 Query: 567 ASIINSGLNIIGVESPNEM 585 A I GL ++G+++ M Sbjct: 581 AKTIKQGLALLGIDTLERM 599 >gi|113971826|ref|YP_735619.1| arginyl-tRNA synthetase [Shewanella sp. MR-4] gi|123130050|sp|Q0HEF5|SYR_SHESM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|113886510|gb|ABI40562.1| arginyl-tRNA synthetase [Shewanella sp. MR-4] Length = 581 Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 52/147 (35%), Positives = 82/147 (55%), Gaps = 2/147 (1%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 RI ++R +D +HG L+TN AM+L++ G +P +A+LI+ + V V IAG GFIN Sbjct: 29 RIQVDRTKDKSHGDLATNLAMMLTKAAGKNPRELAQLIIDNLPASAYVAKVEIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 ++ S L L + +S G L T V +++ S N MHVGH R ++GD++ Sbjct: 89 FFIDDSALANQLQA-AISDEHLGIKLPTPQTIV-VDYSSPNLAKEMHVGHLRSTIIGDSV 146 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTL 177 + F G++V R+ ++ D G Q L Sbjct: 147 VRTLEFLGHKVIRQNHVGDWGTQFGML 173 Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 17/180 (9%) Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 D TL + VG +V++ L + + F F ++ + N Y+ YAY R IF Sbjct: 419 DEATLAEIARVVGISAVKYADLSKNRTSDYIFSFEQML-SFEGNTAPYLLYAYTRVAGIF 477 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 ++A DI DL + V+ E E D LA++ ++ +P+ L YL Sbjct: 478 KRATDI--DLSQ---AKIVLEHEKEKDLGN-----KLAQFGEILSRVIDKGQPHVLCGYL 527 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 Y+LA F + P L A+N + RL L A+ + GLN++G+E+ M Sbjct: 528 YELAGAFSSFY---EACPVL---AADNDEQKHSRLLLSQLTANTLQKGLNLLGIETLERM 581 >gi|317472406|ref|ZP_07931731.1| arginyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA] gi|316900126|gb|EFV22115.1| arginyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA] Length = 490 Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 127/541 (23%), Positives = 232/541 (42%), Gaps = 97/541 (17%) Query: 88 FINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N ++ + ++ ++L + V YG + IG G + I++ S N HVGH R ++ Sbjct: 4 YVNFFIDRTMFVSEMLKQVSVDN--YGSSEIGCGKTICIDYSSPNVAKNFHVGHLRTTLI 61 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNND-SDLPEGYYPGV 204 G+++ + GY V R ++ D G Q L ++ W ++A+ N S+L + + Sbjct: 62 GNSIYRIYKKLGYRVERINHLGDWGTQFGKLIVAYKKWGSKEAVEQNGISELMK-----I 116 Query: 205 YLK-HVGKELADKYSSEL------LNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNI 254 Y+K H E D + E + +E+ L I KD S+ +I + L++ Sbjct: 117 YVKFHEEAEKDDTLNDEARAWFVKMEQGDEEALSIWEWFKDISLIEYKRI----YELLDV 172 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 D + E F+R S ++D L ++G + E S+ D+++ Sbjct: 173 DFDSYAGE-SFYRDKTSA---VVDELKKKGMLKE-------SEGAFIVDLEKY------- 214 Query: 315 MVGDDVDRPLLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371 D ++K DGS Y DLA Y K Y+ F+ IYV G + + ++ V Sbjct: 215 ---DMTPCLIMKKDGSSIYATRDLAAIFYRKKTYD--FEKCIYVTGMEQKLHFAQVFKVV 269 Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------- 416 + + A+ +++ + +G K+S R+G+ I ++ E Sbjct: 270 ELMGYEWAKTDLIHVPYGLVSLEGG--KLSTRSGNIIYAEDILRESVSKIKEVINDKNPD 327 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466 VG ++ F L+ + + + F + K+ E YVQY YAR S+ R Sbjct: 328 LQDKEEVAKMVGIGAIIFNDLYNQRIKDVTFSWDKIHSFDGETGP-YVQYTYARAASVLR 386 Query: 467 QA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 + D+ ++D L D + + L+ L +P V+E A EP +A + Sbjct: 387 KTGITDVPEEIDSSLLT----------DEASVSLLKELIRFPEVVETAAERLEPSVVARF 436 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 + +A F+ H+ H EN + KL R++LV I GL+++G++ P + Sbjct: 437 VMSVAQAFN-HFYH--ENQ----CNVEDEKLKRARVKLVIIAKEAIKDGLDLLGMKCPEQ 489 Query: 585 M 585 M Sbjct: 490 M 490 >gi|332299753|ref|YP_004441674.1| Arginyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707] gi|332176816|gb|AEE12506.1| Arginyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707] Length = 604 Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 128/586 (21%), Positives = 236/586 (40%), Gaps = 98/586 (16%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR-NLIGK 119 P AE I A+++ D+ + + KGF+NL L+ + L I + YG + Sbjct: 56 PQETAETIGAKLQEQTDLIASYGVVKGFLNLTLTDTVWISALREIAETP-HYGHITPTAQ 114 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 V IE+ S N P+H+GH R ++G +LA ++ SG+ V + +ND G I L Sbjct: 115 SPLVMIEYSSPNTNKPLHLGHVRNNLLGYSLAQILEASGHRVVKTNIVNDRGVHICKSML 174 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 + + R+ S + G Y KE Y +EL P D V+ Sbjct: 175 A-WLRWGNGETPESSGKKGDHLIGDYYVRFDKE----YRAELAQIRAAH--PDWSDEEVE 227 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII------------DNLARQGYVY 287 A +++ D + L + +GDP +R + + +R G + Sbjct: 228 AKSQLMADARQMLR----------QWEQGDPE-VRALWRQMNEWVYKGFDETYSRMGVSF 276 Query: 288 EGILPPPKSKTTQKCDMDR--KQLLFRSTMVG--------DDVDRP-LLKSDGSYTYFAA 336 + I + + ++ R K+ LF G + +D+ LL+SDG+ Y Sbjct: 277 DKIYYESDTYLVGREEVLRGLKEGLFERHEDGSVWADFEAEGLDKKILLRSDGTSVYITQ 336 Query: 337 DLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRD 394 D+ K +Y+ D M+YV+G++ + + L + + K + + +V L Sbjct: 337 DIGTAKLRYQDFPIDQMVYVVGNEQEYHFQVLSLLLDRLGYKWGKSLTHFSYGMVELPNG 396 Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR----------------KNSELLDFD 438 KM R G + ++D + ++ + + +E++ Sbjct: 397 ----KMKSREGTVVDADDLMDAMRDTALEVARTAQQAKGVELAAEPTAEELRTAEMVGLG 452 Query: 439 FCK---VKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 K +K ++N +F ++QY YAR S+ ++A ++ Sbjct: 453 ALKYFILKVDPRKNMMFNPEESIDFNGNTGPFIQYTYARICSLLQKAD--------EMGY 504 Query: 482 RNVIPQESEFDTS--ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 ++ +P+ S E L+ L +YP V++ A + P ++A Y YDL ++ + Sbjct: 505 KHQLPEGGALALSSYETALVQQLLDYPTVVQEAAESYSPARIANYTYDLVKGYNQFYH-- 562 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + L MRLQL VA I+S + ++G+ P M Sbjct: 563 ----ECSVLREEDEALRSMRLQLSKTVAETIHSAMGLLGIALPERM 604 >gi|260906982|ref|ZP_05915304.1| arginyl-tRNA synthetase [Brevibacterium linens BL2] Length = 588 Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 142/611 (23%), Positives = 245/611 (40%), Gaps = 117/611 (19%) Query: 38 RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 R N A+ L++ L P IA IV + + ++ I+G GFINL + + Sbjct: 32 RSSQFADFQANVALPLAKELKSKPRDIANTIVGNLDLADICETPEISGPGFINLTFTSDF 91 Query: 98 LRKILSSIVVS-------GIEYGRNLIGK---GTKVNIEFVSANPTGPMHVGHCRCAVVG 147 L L+ + G G G +V I++ + N MHVGH R VVG Sbjct: 92 LASTLNQGTAAEAVAETPATTEGATSEGAAAAGQRVVIDYSAPNVAKEMHVGHLRTTVVG 151 Query: 148 DTLASLMAFSGYEVTREYYINDAG-------------------AQINTLALSVFWRYQQA 188 D LA F G V R+ +I D G AQ + + F++ +A Sbjct: 152 DALARTHEFLGNTVVRQNHIGDWGTPFGMLIEHLLDVGIESETAQDISANPNAFYQAARA 211 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY--SVQAMMKII- 245 +++D E + + V + DK + EL E+ + K Y + +++ + Sbjct: 212 KFDSD----EAFATRARARVVELQGGDKQTLELW----ERLVGFSKTYFNHIYSLLDVTL 263 Query: 246 -RDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVYEGILPP-PKSKTTQKC 302 DDL +I +D + +++ D LAR + +G L P+ T ++ Sbjct: 264 TDDDLAGESIYNDDL----------AAVCQELEDAGLAR---ISDGALCVFPEGFTGRE- 309 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361 G+ + + KSDG Y Y DLA + + D ++YV+G+ + Sbjct: 310 --------------GEPLPLIIRKSDGGYGYATTDLAAVRHRVRNLNADRVLYVVGTPQA 355 Query: 362 GYVKRLEAVAAA-------VSEKKAQINVLLCELVRLYR--DGMPIKMSKRAGDFI---- 408 + + + ++A A V + +I +L + ++ R G P+++++ + + Sbjct: 356 MHFEMVFSIARAAGWLPEGVEFEHVKIGNVLGDDGKILRTRSGAPVRLAELLDEAVARAK 415 Query: 409 -TLRH------------VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455 TL+ V VG +V++ L + FD ++ N Y+Q Sbjct: 416 ATLQESNVEFDAEEEALVAKTVGIGAVKYADLSVAHDTSYTFDLDRMLVPIG-NTAPYLQ 474 Query: 456 YAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514 YA AR RSI R+A+ D F L + +E L + L + V+ Sbjct: 475 YAGARIRSILRKAEGDAFTAAPIHLG-----------EAAERDLGLALLGFSDVVAEVVA 523 Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 P++L YL+DLA F + + P L A R RL+L V ++ +GL Sbjct: 524 GSAPHRLCTYLFDLAQSFTSFY---EQCPVLIAETAEVRD---SRLRLSQTVLEVLEAGL 577 Query: 575 NIIGVESPNEM 585 ++G+ P M Sbjct: 578 GVLGIRVPERM 588 >gi|313887236|ref|ZP_07820931.1| arginine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I] gi|312923327|gb|EFR34141.1| arginine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I] Length = 604 Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 128/586 (21%), Positives = 236/586 (40%), Gaps = 98/586 (16%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR-NLIGK 119 P AE I A+++ D+ + + KGF+NL L+ + L I + YG + Sbjct: 56 PQETAETIGAKLQEQTDLIASYGVVKGFLNLTLTDTVWISALREIAETP-RYGHITPTAQ 114 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 V IE+ S N P+H+GH R ++G +LA ++ SG+ V + +ND G I L Sbjct: 115 SPLVMIEYSSPNTNKPLHLGHVRNNLLGYSLAQILEASGHRVVKTNIVNDRGVHICKSML 174 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 + + R+ S + G Y KE Y +EL P D V+ Sbjct: 175 A-WLRWGNGETPESSGKKGDHLIGDYYVRFDKE----YRAELAQIRAAH--PDWSDEEVE 227 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII------------DNLARQGYVY 287 A +++ D + L + +GDP +R + + +R G + Sbjct: 228 AKSQLMADARQMLR----------QWEQGDPE-VRALWRQMNEWVYKGFDETYSRMGVSF 276 Query: 288 EGILPPPKSKTTQKCDMDR--KQLLFRSTMVG--------DDVDRP-LLKSDGSYTYFAA 336 + I + + ++ R K+ LF G + +D+ LL+SDG+ Y Sbjct: 277 DKIYYESDTYLVGREEVLRGLKEGLFERHEDGSVWADFEAEGLDKKILLRSDGTSVYITQ 336 Query: 337 DLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRD 394 D+ K +Y+ D M+YV+G++ + + L + + K + + +V L Sbjct: 337 DIGTAKLRYQDFPIDQMVYVVGNEQEYHFQVLSLLLDRLGYKWGKSLTHFSYGMVELPNG 396 Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR----------------KNSELLDFD 438 KM R G + ++D + ++ + + +E++ Sbjct: 397 ----KMKSREGTVVDADDLMDAMRDTALEVARTAQQAKGVELAAEPTAEELRTAEMVGLG 452 Query: 439 FCK---VKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 K +K ++N +F ++QY YAR S+ ++A ++ Sbjct: 453 ALKYFILKVDPRKNMMFNPEESIDFNGNTGPFIQYTYARICSLLQKAD--------EMGY 504 Query: 482 RNVIPQESEFDTS--ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 ++ +P+ S E L+ L +YP V++ A + P ++A Y YDL ++ + Sbjct: 505 KHQLPEGGTLALSSYETALVQQLLDYPTVVQEAAESYSPARIANYTYDLVKGYNQFYH-- 562 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + L MRLQL VA I+S + ++G+ P M Sbjct: 563 ----ECSVLREEDEALRSMRLQLSKTVAETIHSAMGLLGIALPERM 604 >gi|118790236|ref|XP_318119.3| AGAP004708-PA [Anopheles gambiae str. PEST] gi|116122419|gb|EAA13294.3| AGAP004708-PA [Anopheles gambiae str. PEST] Length = 663 Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 129/539 (23%), Positives = 243/539 (45%), Gaps = 88/539 (16%) Query: 43 GHLSTNAAMILSRPLGL-----DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPS 96 G N+AM +++ L P +A+ +VA + K P VD + IAG G++N++LS S Sbjct: 113 GDYQCNSAMQIAQHLKQLSVKSSPREVAQKLVAELQKPIPCVDRLEIAGAGYVNIFLSRS 172 Query: 97 YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 Y + + SI+ GI LI K +V ++F S N MHVGH R ++GD++ + + Sbjct: 173 YGEQRIMSILRHGIVV--PLIEK-KRVIVDFSSPNVAKEMHVGHLRSTIIGDSICRFLEY 229 Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQ--QALYNNDSDLPEGYYPGVYLKHVGKELA 214 G++V R +I D G Q L + R+ Q SDL + +Y ++ E+ Sbjct: 230 LGHDVLRINHIGDWGTQFGMLIAHLQDRFPNFQTESPPISDL-QAFYKESKVRFDSDEVF 288 Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---S 271 K + E + + L +K +++ + + R + + + + D+ + E RG+ S Sbjct: 289 KKRAYECVVKLQSGELSYLKAWNL--ICDVSRKEFQTIYNRLDVKLVE----RGESFYQS 342 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD---VDRPLLKSD 328 + I++ L + G++ E D +L+ M G++ + ++KSD Sbjct: 343 RMEKIVEELKQDGFLEE----------------DEGRLI----MWGENRAGIPLTIVKSD 382 Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAA---AVSEKKAQINVL 384 G +TY +D+A K + E D +IYV + + + + + + A + E K +++ + Sbjct: 383 GGFTYDTSDMAAIKQRLQEEKADWLIYVTDAGQATHFQTIFSCAKRAKILQESKHRVDHV 442 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------VGSD 420 +V L DG K R+GD + L +++E + Sbjct: 443 GFGVV-LGEDGKKFKT--RSGDTVKLTELLNEGLRRAMEKLVQKERNLVLTQEELVAAQE 499 Query: 421 SVRFMML------WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 SV + + +N+E + F F K+ E K N Y+ YAY R RSI R+ F + Sbjct: 500 SVAYGCIKYADLSHNRNNEYV-FSFDKMLE-DKGNTAVYLLYAYTRIRSIARKCGGDFAN 557 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI-ENATIAQEPYKLAFYLYDLASVF 532 + VI + E + ++++ + +I +N ++ + L ++Y++ + F Sbjct: 558 DMQKVIDSTVIKLDHEKEWKLAKVLLRFTDVMLLIMKNLSL----HHLCEFVYEICTAF 612 >gi|313204952|ref|YP_004043609.1| arginyL-tRNA synthetase [Paludibacter propionicigenes WB4] gi|312444268|gb|ADQ80624.1| arginyl-tRNA synthetase [Paludibacter propionicigenes WB4] Length = 597 Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 122/571 (21%), Positives = 229/571 (40%), Gaps = 125/571 (21%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 KGF+NL +S SY + L+ I + + + IE+ S N P+H+GH R + Sbjct: 81 KGFLNLSISKSYWLETLNLIHSTPAFGTKTATDDAELMMIEYSSPNTNKPLHLGHIRNNL 140 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRYQQALYNN-DSDLPEGYYP 202 +G ++A + +G++V + +ND G I + LA +F + + D G Y Sbjct: 141 LGHSIAEIQKANGWKVIKTNIVNDRGIHICKSMLAWKLFGNGETPDSSGLKGDHLVGKYY 200 Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262 ++ KH E+ + + +K P++ L Q + E Sbjct: 201 VIFDKHYKAEIKELIEKGMSEEEAKKSAPLI------------------LEAQKMLLAWE 242 Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR---------------- 306 ++ DP +R + + + G+VY G K+ T D+ Sbjct: 243 NN----DPE-VRQLWETM--NGWVYAGF---DKTYTQMGVSFDKIYYESETYLEGKDKVE 292 Query: 307 ----KQLLFR-------STMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKYER-GFDNMI 353 + +R + + GD +D + LL++DG+ Y D+ K +Y+ + M+ Sbjct: 293 EGLANGVFYRREDGSVWADLTGDGLDEKLLLRADGTSVYMTQDIGTAKLRYDDYPINKMV 352 Query: 354 YVMGSDHS--------------------------GYVKRLEAVAAAVSEKKAQINVLLCE 387 YV+G++ + G V+ E + + L+ E Sbjct: 353 YVVGNEQNYHFQVLSILLDKLGFEWGKSLVHFSYGMVELPEGKMKSREGTVVDADDLMSE 412 Query: 388 LVRLYRDGMPIKMSKRAGDFIT-----LRHVVDEVGSDSVRFMMLW---RKN-----SEL 434 ++ R+ S+ G + +V VG S+++ +L RKN E Sbjct: 413 MIETARE-----TSQELGKLDNCTPEEIETIVRMVGLGSLKYFILKVDPRKNMTFNPKES 467 Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494 +DF+ N ++QY +AR +S+ R+A + L+F ++ + E Sbjct: 468 IDFN---------GNTGPFIQYTHARIKSVLRKASE--QGLEFG----SINNTQLEISEK 512 Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554 E L+ L E+P V++ A P +A Y+YDL ++ + ++ N Sbjct: 513 ESYLVQSLTEFPAVVKQAGDEFSPALIANYIYDLVKEYNQFYHD------FTILKEENAA 566 Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L RL L ++AS+I +G+ ++G++ P M Sbjct: 567 LKQFRLILSESIASVIKTGMGLLGIDVPERM 597 >gi|325275658|ref|ZP_08141554.1| arginyl-tRNA synthetase [Pseudomonas sp. TJI-51] gi|324099202|gb|EGB97152.1| arginyl-tRNA synthetase [Pseudomonas sp. TJI-51] Length = 578 Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 1/146 (0%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE ++ + D+ V IAG GF+N Sbjct: 30 IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLINALPASADISKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + L L + + G G KV ++ + N MHVGH R ++GD++A Sbjct: 90 FQNTDALANRLDAALADA-HLGARKAGPAQKVVVDLSAPNLAKEMHVGHLRSTIIGDSVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177 ++ F G V R+ ++ D G Q L Sbjct: 149 RVLEFLGDTVIRQNHVGDWGTQFGML 174 Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 19/155 (12%) Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 LR + + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 419 LRRIGEVVGIGAVKYADLSKHRTSDYSFNF-ELMLNFEGNTAPYLLYAYTRVAGVFRKLG 477 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 F D ++ Q + E L LA++ + + P+ L YLYDLA Sbjct: 478 KRFDQAD-----GKIVLQAAH----EQDLAARLAQFGETLNSVAEKGTPHVLCSYLYDLA 528 Query: 530 SVFHGHWSH----GRENP-----RLRFVQANNRKL 555 +F + + E P RLR R L Sbjct: 529 GLFSSFYENCPILAAETPEQQQSRLRLAALTGRTL 563 >gi|153939026|ref|YP_001390429.1| arginyl-tRNA synthetase [Clostridium botulinum F str. Langeland] gi|166232779|sp|A7GCB9|SYR_CLOBL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|152934922|gb|ABS40420.1| arginine--tRNA ligase [Clostridium botulinum F str. Langeland] gi|295318516|gb|ADF98893.1| arginine--tRNA ligase [Clostridium botulinum F str. 230613] Length = 563 Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 135/584 (23%), Positives = 248/584 (42%), Gaps = 115/584 (19%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIE 111 L++ P IAE + +I + + V G ++N ++ + L K +L ++ + Sbjct: 44 LAKTFRKAPNLIAEELKEKINKEG-FEKVVTVGP-YLNFFVDKTILIKDVLEKVLSEKEK 101 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG + +G+G V +E+ S N P H+GH +G+ L +++F GY ++ D G Sbjct: 102 YGSSKVGEGKNVVVEYSSPNIAKPFHIGHLFTTAIGNALYKILSFEGYNCIGINHLGDWG 161 Query: 172 AQINTLALSVF--WRYQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSEL-LNFP-- 225 Q L +S + W ++AL + G +Y+K H E + E LNF Sbjct: 162 TQFGKL-ISAYRRWVDEEALEKD----AIGELLRIYVKFHEEAEKDPELEKEARLNFKNL 216 Query: 226 ------EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279 E + KD S++ K+ L I+ D E S D +D Sbjct: 217 EDGSKEETELWNRFKDLSLKEFNKV----YDMLGIKFDSLAGE--------SFYSDKMDA 264 Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRP---LLKSDGSYT 332 + ++ +D K LL S ++ D+ + P + KSDG+ Sbjct: 265 VVQE--------------------IDDKGLLVDSNGAKVVMLDEYNMPPCMIKKSDGATI 304 Query: 333 YFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCEL 388 Y DLA Y K Y+ F IYV+G+ + + K++ + A + L Sbjct: 305 YATRDLAAAIYRKKTYD--FHKCIYVVGTPQALHFKQVFTTLKLMGHDWADDCKHVGFGL 362 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD---------- 438 V+L K+S R GD + L ++++ ++++ ++ KN L + + Sbjct: 363 VKLANK----KLSTRNGDVVFLEDLLNQSVEETLK--IINEKNPNLKNKEDVAKKLGIGA 416 Query: 439 --FCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 F +K + + VF YV+Y+YAR +SI R+A ++ + D+ Sbjct: 417 VVFTYLKNNRERDIVFDWKEILSFDGETGPYVEYSYARGKSILRKAGELTGEADY----- 471 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-SHGRE 541 + + + EF+ ++L L + I NA EP + Y+ ++A F+ + +HG Sbjct: 472 SKLSSKEEFELAKL-----LGGFNDAIMNAIDKLEPAMVTRYIIEVAKAFNKFYNAHG-- 524 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A + + + R++LV A +I + LN++G++ EM Sbjct: 525 -----ILNAEDNDVKLARVKLVEATCQVIKNALNLLGIDVVEEM 563 >gi|307718710|ref|YP_003874242.1| hypothetical protein STHERM_c10230 [Spirochaeta thermophila DSM 6192] gi|306532435|gb|ADN01969.1| hypothetical protein STHERM_c10230 [Spirochaeta thermophila DSM 6192] Length = 587 Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 123/556 (22%), Positives = 228/556 (41%), Gaps = 76/556 (13%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE +VAR+ + V + AG G++NL+L ++ +LS I +G YG + + Sbjct: 65 PQKIAEEVVARLLPEGAVRKIEGAG-GYVNLFLDREAFALSVLSDIAHAGPGYGAGTLHQ 123 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 ++ +EF N P+H+GH R ++G++++ ++A G +V + IND G I L Sbjct: 124 DKRIMVEFSCPNTNKPLHLGHMRNNILGESVSRILASQGADVLKVNLINDRGIHICKSML 183 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 + + P+ + Y+K D + E W D V+ Sbjct: 184 AYKKFGEGKTPEEVGKKPDHFVGDFYVKFNEWAKEDSTAEEQARRMLRAWED--GDAEVR 241 Query: 240 AM--------MKIIRDDLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290 A+ ++ I + I D I+ D + G RD++ G Y+ Sbjct: 242 ALWEKMNRWAIEGIEQTYRRTGISFDKIYYESDTYLLG-----RDLVLKGLEDGVFYQ-- 294 Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGF 349 + + D+ + +G D + LL+SDG+ Y DL +Y+ F Sbjct: 295 ----EEDGSVWVDL---------SEIGLD-KKVLLRSDGTSLYLTQDLGTAVARYQDWAF 340 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ---------INV----------------- 383 D +IYV+ S+ + + + L V + A+ +N+ Sbjct: 341 DLLIYVVASEQNYHFRVLFYVLEKLGFSWAKNLYHLSYGMVNLPEGKMKSREGTVVDADD 400 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443 LL LV + R+ I+ R + + + + ++ + +L ++ + F+ K Sbjct: 401 LLDRLVEMARE--EIREKGRVDEVEDIDRTAEAIALGALHYFLLQVSPNKDMIFN-PKES 457 Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503 N Y+QY AR S+ R+A P L + P +P D + +LIV L+ Sbjct: 458 LSLTGNTGPYLQYMGARICSMERKAD---PSL---VVPVEEVPTAELVDDASWELIVLLS 511 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 ++P V+E+A P + +LY+L F + +NP + N+ RL L Sbjct: 512 QFPEVVESAAREYNPSLVIGFLYELGKTFSSFY---HDNP---IITHPNKDTARARLALA 565 Query: 564 HAVASIINSGLNIIGV 579 + ++ +G ++ + Sbjct: 566 RGIRQVLENGFRLVNI 581 >gi|257413782|ref|ZP_05591795.1| arginine--tRNA ligase [Roseburia intestinalis L1-82] gi|257202281|gb|EEV00566.1| arginine--tRNA ligase [Roseburia intestinalis L1-82] Length = 595 Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 123/597 (20%), Positives = 240/597 (40%), Gaps = 81/597 (13%) Query: 36 RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95 RP C + N AM ++ P IA+ + A++ GF+NL L Sbjct: 33 RPDLCEY---QCNGAMAAAKEYKKAPFMIADEVAAKLAEASMFSMTESVKPGFLNLKLDE 89 Query: 96 SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155 ++L ++ + +G + I++ N P+HVGH R A++G+++ + Sbjct: 90 AFLASYVADMQKDEGRFGCEKAKNPKTIMIDYGGPNVAKPLHVGHLRSAIIGESIKRIGK 149 Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALY---NNDSDLP----------EGYYP 202 F+G++V + ++ D G Q+ + + R +Y N + + P E YP Sbjct: 150 FAGHKVIGDVHLGDWGLQMGLIITELKLRQPDLVYFDENFEGEYPKEAPFTISELEEIYP 209 Query: 203 GVYLK----HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 K KE A + + EL N K + + + + ++ + + LN+ ++ Sbjct: 210 TASKKSKEDEAYKEAAMQATYELQN--GRKGYQALLSHILNVSVTDLKKNYENLNVSFEL 267 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + E D P+ ++ + D+ YV +G L K D D K++ M+ Sbjct: 268 WKGESDAQPYIPAMVQKMKDD--GFAYVSDGALV-----VDVKEDTDTKEI--PPCMI-- 316 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 LKSDG+ Y DLA + E D +IYV+ + ++ A Sbjct: 317 ------LKSDGASLYNTTDLATIVWREEDYDPDEIIYVVDKRQELHFVQVFRCARKTGLV 370 Query: 378 KAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K + + + +DG P K R G + L ++V E+ ++ ++ + +K E L Sbjct: 371 KPETELKFLGFGTMNGKDGKPFKT--RDGGVMRLEYLVSEIDNEMLKKITENQKAKENLG 428 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVIPQ-------- 487 + KE +K + ++Y ++ +KD D+D F F N P Sbjct: 429 ISEEEAKETAKTVALAAIKYGDLSNQA----SKDYIFDIDRFTSFEGNTGPYILYTIVRI 484 Query: 488 -------------------ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 S SE L++ ++++ VI+ A P+K+ Y+YDL Sbjct: 485 KSILHKYHDLGKSAEGAVITSAHSESEKNLMLEISKFNAVIDGAFADTAPHKICSYIYDL 544 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A+ F+ + + + + + ++L+ S++ + ++++G +P M Sbjct: 545 ANAFNSFYH------ETKIMSEEDETVQKSYIRLLELTKSVLETSIDLLGFSAPERM 595 >gi|223042112|ref|ZP_03612285.1| arginyl-tRNA synthetase [Actinobacillus minor 202] gi|223017100|gb|EEF15539.1| arginyl-tRNA synthetase [Actinobacillus minor 202] Length = 575 Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 136/585 (23%), Positives = 241/585 (41%), Gaps = 88/585 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AM ++ LG++P A+ I+ +D VD + IAG GFIN++L+ ++L + Sbjct: 37 GDYQANGAMGAAKKLGMNPREFAQKILDNANLDGIVDKLEIAGPGFINIFLNKAWLAEN- 95 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 ++ + + +G T V +++ S N MHVGH R ++GD + + F G V Sbjct: 96 ANQALQAVNFGIQTANPQTIV-VDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNNVI 154 Query: 163 REYYINDAGAQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221 R ++ D G Q L A + A SDL E +Y KE D + Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHASQMELSDL-EAFY------RAAKEHYDSDEA-- 205 Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI-RDIIDNL 280 F E+ +VK S + + L + + H+ ++++ R + + +D++ Sbjct: 206 --FAEKARNYVVKLQSGDEYCRTMWKKLVDITMHHN----QENYDRLNVTLTEKDVMGE- 258 Query: 281 ARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFRSTMVGDDVDRPL----LKSDGSYTY 333 +Y +LP + K + + ++F D D P+ K DG + Y Sbjct: 259 ----SLYNPMLPEIVADLKAKGLAVEDEGALVVFLDEFKNKDGD-PMGVIVQKKDGGFLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI-NVLLCEL--- 388 D+A K +YE D + S + ++++ A ++ K + + E Sbjct: 314 TTTDVAAAKYRYETLKADRALVFSDSRQAQHMQQ----AWLITRKAGYVPDSFSLEHPFF 369 Query: 389 -VRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420 + L +DG P K R+G + L+ ++DE V Sbjct: 370 GMMLGKDGKPFKT--RSGGTVKLKDLLDEAVERADKLISARSTDLTAEEKAAVVEAVAIG 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 SV++ L + + FD+ + + N Y+QYAY R RSIF +A +D + Sbjct: 428 SVKYSDLSKNRTTDYVFDWDNML-TFEGNTAPYMQYAYTRIRSIFARA-----GIDANEL 481 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 + E + E L V L ++ + P+ L YLY+LA F + Sbjct: 482 TGEIHLTEDK----ERALAVKLLQFEEALNGVAKEGMPHILCQYLYELAGTFSSFY---E 534 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P L +A + RL+L A + GL+++G+++ +M Sbjct: 535 ACPILNAEEA----VKNSRLRLAALTAKTLKQGLDLLGIKTVEKM 575 >gi|297519857|ref|ZP_06938243.1| arginyl-tRNA synthetase [Escherichia coli OP50] Length = 489 Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 115/467 (24%), Positives = 201/467 (43%), Gaps = 68/467 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + ++ V IAG GFIN++L P++L + + Sbjct: 37 GDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S G K T V +++ + N MHVGH R ++GD + F G++V Sbjct: 97 QQALASD-RLGVATPEKQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYS 218 R ++ D G Q L + W +Q N +DL EG+Y A K+ Sbjct: 155 RANHVGDWGTQFGML---IAWLEKQQQENAGEMELADL-EGFYRD----------AKKHY 200 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDI 276 E F E +VK +Q+ + R+ + L DI ++++ + R + + RD Sbjct: 201 DEDEEFAERARNYVVK---LQSGDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDD 254 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTY 333 + + + GI+ K+K + + ++F G+ + + K DG Y Y Sbjct: 255 VMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLY 313 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELV 389 D+A K +YE D ++Y + S ++ + A+ A V E + + + Sbjct: 314 TTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM- 372 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSV 422 L +DG P K RAG + L ++DE VG +V Sbjct: 373 -LGKDGKPFKT--RAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAV 429 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 ++ L + + FD+ + + N Y+QYAY R S+FR+A+ Sbjct: 430 KYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKAE 475 >gi|196006025|ref|XP_002112879.1| hypothetical protein TRIADDRAFT_56467 [Trichoplax adhaerens] gi|190584920|gb|EDV24989.1| hypothetical protein TRIADDRAFT_56467 [Trichoplax adhaerens] Length = 668 Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 137/590 (23%), Positives = 248/590 (42%), Gaps = 87/590 (14%) Query: 43 GHLSTNAAMILSRPL-----GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N AMILS+ L L P ++AE I+ + + ++ IAG GFIN+ + + Sbjct: 119 GDYQCNNAMILSKVLKENGKSLSPRSVAEQIIQHLPANDVLEKTEIAGPGFINITIKKHF 178 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + +LS I++ G+ ++ + +V ++F S N MHVGH R ++GD+++ L+ F Sbjct: 179 ILSLLSDIIMYGVR--PPVMNRKMRVLVDFSSPNVAKEMHVGHLRSTIIGDSISRLLEFV 236 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217 G++V R ++ D G Q L + + + Y N S P + +L Y Sbjct: 237 GHDVVRISHLGDWGTQFGMLIAHLRDTFPK--YLNQS-------PPI------ADLQAFY 281 Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKII---RDDLKALNIQHDIFISEDDFHRGDPSPIR 274 + + F E+ + K + +A++K+ D KA + D +S+++F + R Sbjct: 282 KAAKVRFDED---AVFKKRAYEAVVKLQARESDYFKAWEMICD--VSKNEFEKIYQ---R 333 Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL----FRSTMVGDDVDRPL--LKSD 328 + + R Y+ ++ D+D + LL R + ++ PL +KSD Sbjct: 334 LGVKVVNRGESFYQDMMIDVVK------DLDTRGLLELDEGRKILKVPNIKVPLTIVKSD 387 Query: 329 GSYTYFAADLAYFKCK-YERGFDNMIYVM-------------GSDHSGYVKRLEA----- 369 G +TY +D+A + + + D +IY+ S+ GYV R Sbjct: 388 GGFTYDTSDMAAMRQRVMDEKADWLIYITDGGQGLHFEIIFSASEAVGYVNRKHVRVVHV 447 Query: 370 -VAAAVSEKKAQINVLLCELVR---LYRDGM---PIKMSKRAGDFI----TLRHVVDEVG 418 + E K + + VR L +G+ K+ + D + L V Sbjct: 448 PFGVVLGEDKKKFKTRSTDTVRLVDLLDEGIRRAKAKLIDKGRDKVLSKEELEVAAKAVA 507 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 +++ L R + F F K+ + K N Y+ YA R RSI R A ++ Sbjct: 508 YGCIKYADLSRNRTGDYIFSFDKMLD-DKGNTAVYLLYALTRIRSIARLA-----NVSSS 561 Query: 479 LFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 + EFD E +L + +P ++E + L ++Y+L+ F + Sbjct: 562 ELTKVAESASIEFDHPKEWKLAKLILRFPEILEKILDDLLLHPLCDFMYELSCTFTEFYD 621 Query: 538 --HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + E R K+ M RL L A A I+ +++G++ ++M Sbjct: 622 TCYCIEKDR---KTGEILKINMNRLILCEATAMIMEKSFHLLGIDGVDKM 668 >gi|33519907|ref|NP_878739.1| arginyl-tRNA synthetase [Candidatus Blochmannia floridanus] gi|39932110|sp|Q7VQX7|SYR_BLOFL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|33504252|emb|CAD83515.1| arginyl-tRNA synthetase [Candidatus Blochmannia floridanus] Length = 583 Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 144/605 (23%), Positives = 248/605 (40%), Gaps = 87/605 (14%) Query: 26 KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85 K L+ I +++ G N + +S+ L + + + + I + + Sbjct: 21 KSFLNLIQVQQSNHIRFGDYQINGMINISKHLQIPIKDFSNIFIKTINLKGIAKIIKFEP 80 Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 GFIN++LSP+++ ++ I+ + G +LI V I++ S N MHVGH R + Sbjct: 81 PGFINIFLSPTWIENKINHII-DLPKLGIDLIPSKNIV-IDYSSPNIAKEMHVGHLRSTI 138 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD---LPEGYYP 202 +GD++A +++F G+ V R +I D G Q L + L NDS + E YY Sbjct: 139 IGDSIARILSFLGHNVIRSNHIGDWGTQFGMLIAYIKKHKINYLSLNDSQQISMLEYYYQ 198 Query: 203 GVYLKHVG----KELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255 ++ EL+ KY +L + + W +V D S+ K I D L + Sbjct: 199 ESKKEYDSDPNFAELSRKYVVKLQKGDVYCRKIWKYLV-DISISNNQK-IYDRLNVTLKK 256 Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315 DI + E +H P I D L K T D ++F + Sbjct: 257 KDI-MGESMYHDMLPYIITD---------------LKNKKLAVTS----DHATIVFLNQN 296 Query: 316 VGDDVDRP----LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV 370 + P + K DG Y Y D+A K + E D +IY + S ++ + + Sbjct: 297 KNSKKNNPFGVIIQKKDGGYLYSTTDIACIKYRCETLHADRIIYYIDSRQKQHLMQAWEI 356 Query: 371 A--AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428 A A K +C ++ L ++ P K R+G+ I L +++E + + ++ Sbjct: 357 AYQAGYITKAVVFEHHVCGML-LDKNKKPFKT--RSGNTIKLITLLNEAFNKAYNLILNK 413 Query: 429 RKNSE---------LLDFDFCKVKEQSKE---NPVF--------------YVQYAYARCR 462 N E ++ K E SK N +F Y+QYAY R Sbjct: 414 NLNLEYKKINHLAHIISIGAIKYSELSKNRTTNYIFNWDKILNFDGNTAPYIQYAYTRIS 473 Query: 463 SIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520 SIF++ + + + +F + QE E+ L + L ++ + P+ Sbjct: 474 SIFKKINHRSELQEKKYQIF---LSSQE------EILLAICLLQFHETLITVADRGTPHI 524 Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 L YLY L+++F + H P L+ + K + RL+L A I+ GLN++G+E Sbjct: 525 LCGYLYKLSTLFSLFYEHC---PILK-TECTYTKYS--RLKLSFITAQILKKGLNLLGIE 578 Query: 581 SPNEM 585 + M Sbjct: 579 TSEYM 583 >gi|291515730|emb|CBK64940.1| arginyl-tRNA synthetase [Alistipes shahii WAL 8301] Length = 593 Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 137/598 (22%), Positives = 241/598 (40%), Gaps = 142/598 (23%) Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 I E + A + P++ S F KGF+NL L ++ + + E G V Sbjct: 62 IGEYMAANV---PEIAS-FNVIKGFLNLSLDSAFWAARFAEVAAD--ERFGQAPATGRTV 115 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +E+ S N P+H+GH R ++G ++A ++ +G+ V + +ND G I L+ W Sbjct: 116 MVEYSSPNTNKPLHLGHIRNNLLGYSVAQILKANGHTVIKANLVNDRGIHICKSMLA--W 173 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGK---ELADKYSSELLNF-----PEE---KWLPI 232 + LY N G +L VGK E Y +++ PE+ K PI Sbjct: 174 K----LYGNGETPASSGMKGDHL--VGKYYVEFDKHYKAQIRELVAQGQPEDEAKKNAPI 227 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 + Q M++ + DP + + + + G+VYEG Sbjct: 228 M--LQAQEMLR--------------------KWEARDPE-VYSLWETM--NGWVYEGFDV 262 Query: 293 PPKSKTTQKCDMDR--------------------KQLLFRS-------TMVGDDVD-RPL 324 K+ D D+ K + +R + D +D + L Sbjct: 263 TYKA---LGVDFDKVYYESQTYLLGKSLVEEGLKKGVFYRRPDNSVWIDLTADGLDEKLL 319 Query: 325 LKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAV--SEKKAQI 381 L+ DG+ Y DL ++E D+MIYV+G++ + + + L+ V + ++ I Sbjct: 320 LRGDGTSVYMTQDLGTAFRRFEDNRLDDMIYVVGNEQNYHFQVLKLVLKKLGYADWSDHI 379 Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441 L +V L KM R G + +++ + S + R M ++EL D C Sbjct: 380 THLSYGMVELPEG----KMKSREGTVVDADDLIEGMVS-TAREM-----SAELGKLDGCS 429 Query: 442 VKEQS--------------------KENPVF--------------YVQYAYARCRSIFRQ 467 +E + K+ +F ++QY +AR RS+ R+ Sbjct: 430 EEEANAVSTMVGLGALKYFILKVDPKKTMLFDPRESIDFNGNTGPFIQYTHARIRSVLRK 489 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 A + +DF +++ E+ L+ L EYP V+++A P + Y+Y+ Sbjct: 490 AAE--AGIDFG------GAATADYLREEIDLVKSLTEYPSVVKSAGENFAPSVVGAYVYE 541 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA F+G++ H ++ N + MRLQL VA +I G+ ++G++ P M Sbjct: 542 LAKQFNGYY-HDHS-----ILKEENAGVRTMRLQLAQQVARVIKEGMKLLGIDVPERM 593 >gi|47221361|emb|CAF97279.1| unnamed protein product [Tetraodon nigroviridis] Length = 697 Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 136/610 (22%), Positives = 244/610 (40%), Gaps = 107/610 (17%) Query: 49 AAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS 108 A M+ ++ + ++P IAE I + + + IAG GFIN++L S++ K+LS ++++ Sbjct: 122 AQMLKAKGVKVNPREIAERITRNLPDNELIQKTEIAGPGFINIHLKRSFVSKLLSKLLIN 181 Query: 109 GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168 G++ + +V ++F S N MHVGH R ++GD+++ L F G++V R ++ Sbjct: 182 GVKPPP--LASRKRVVVDFSSPNIAKEMHVGHLRSTIIGDSMSRLFEFLGHDVLRLNHVG 239 Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228 D G Q L + ++ L + P G Y KE ++ + F + Sbjct: 240 DWGTQFGMLIAHLQDKFPDYL---TASPPIGDLQAFY-----KESKKRFDED-EAFKKRA 290 Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVY 287 + +VK S + D +KA N+ D +S +F + I D +D + +G Y Sbjct: 291 YQCVVKLQSKEP------DFIKAWNLICD--VSRQEFQK-----IYDCLDIKIIERGESY 337 Query: 288 -----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342 ++ + + + D RK ++F G + ++KSDG YTY +DLA + Sbjct: 338 YQDLMTDVVKEAEDRGFVQLDEGRK-IIFAP---GQSLPLTVVKSDGGYTYDTSDLAALR 393 Query: 343 CK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE--------KKAQINVLLCELVRLYR 393 + +E D +IYV S + + + A A + + A V+L E RL R Sbjct: 394 QRLFEEKADTIIYVTDSGQGSHFQVVFAAAQMLGWYDPKVTRVEHAGFGVVLGEDKRLQR 453 Query: 394 DGMPI----------------------------KMSKRAGDFITLRHVVDEVGSDSVRFM 425 I K R+G+ + L ++DE S+ + Sbjct: 454 SRNRIRHRYPAPTSVLGLRAADVSSALPNLPRKKFKTRSGETVRLMDLLDEGLKRSMDKL 513 Query: 426 MLWRKNSELLDFDFCKVKE-----------------------------QSKENPVFYVQY 456 ++ L + K + + N Y+ Y Sbjct: 514 KEKERDQVLTADELVKAQRAVALRLHQVRRPFPQPHLTTYVFSFDKMLDDRGNTAAYLLY 573 Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIA 515 A+ R RSI R A ++D + E + E +L + +P ++ Sbjct: 574 AFTRIRSIARLA-----NIDEATLRKEAASTEILLEHEKEWKLGKCILRFPEILVKILDD 628 Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575 + L YLY+LA+ F + + R K+ M R+ L A A+I+ + Sbjct: 629 LLLHSLCDYLYELATTFTEFYDSCYCVEKDRQT-GEVVKVNMWRMLLCDATAAIMAQCFH 687 Query: 576 IIGVESPNEM 585 I+G+ M Sbjct: 688 ILGLNPVERM 697 >gi|113955154|ref|YP_731855.1| arginyl-tRNA synthetase [Synechococcus sp. CC9311] gi|123327552|sp|Q0I6R7|SYR_SYNS3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|113882505|gb|ABI47463.1| arginyl-tRNA synthetase [Synechococcus sp. CC9311] Length = 590 Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 143/606 (23%), Positives = 239/606 (39%), Gaps = 118/606 (19%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98 G N A+ L++PL P IA IV ++ DP ++ IAG GFINL + P L Sbjct: 40 GDFQANGALPLAKPLKQAPRLIAGAIVEALQADPAFAALCLEPQIAGPGFINLTIRPERL 99 Query: 99 RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158 +S+ + G + V ++F S N MHVGH R ++GD+LA ++ F G Sbjct: 100 AAEVSA-RLGDPRLGVPEVQSDAAVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRG 158 Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218 + V R ++ D G Q L +LK V E ++ Sbjct: 159 HRVLRLNHVGDWGTQFGMLI-------------------------THLKQVAPETLNRAD 193 Query: 219 S----ELLNFPEEKWLPIVKDYSVQA-----MMKIIRDD---LKALNIQHDIFISEDDFH 266 + +L+ F E +D + QA ++K+ D LKA + D S +F Sbjct: 194 AVDLGDLVAFYREAKKRFDEDEAFQATSREEVVKLQGGDPVSLKAWGLLCD--QSRREFQ 251 Query: 267 RGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMVGDDVD 321 + I D +D L+ +G + ++ D+ D + +F + G D Sbjct: 252 K-----IYDRLDIRLSERGESFYNPYLASVLSGLKEADLLVTDDGAECVFLEGVNGKD-G 305 Query: 322 RPL----LKSDGSYTYFAADLAYFKCKYERGFDN-----MIYVMGSDHSGYVKRLEAVAA 372 +PL KSDG + Y DLA + ++ D +IYV + + + + VA Sbjct: 306 KPLPVIVRKSDGGFNYATTDLAAIRYRFALAPDGDGARRVIYVTDAGQANHFAGVFQVAK 365 Query: 373 AVS--EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------- 416 + + ++ + LV+ DG K+ R+GD + LR ++DE Sbjct: 366 RANWIPEHGRLEHVPFGLVQ-GEDGK--KLKTRSGDTVRLRDLLDEAVERAEADLRRRLE 422 Query: 417 -----------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459 VG +V++ L + F F ++ + N Y+ YA Sbjct: 423 EEGRSEDDQFIEHVAGTVGLAAVKYADLSQNRITNYQFSFDRML-ALQGNTAPYLLYAVV 481 Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 R I R+ D+ + F PQ E L+ L ++ VI P Sbjct: 482 RIAGIARKGGDLEAEAGMLQFSE---PQ-------EWSLVRELLKFDAVIAEVEEELLPN 531 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 +L YL++L+ VF+ + + ++A + L RL L A + SGL ++G+ Sbjct: 532 RLCSYLFELSQVFNRFYDQ------VPVLKAEGQSLP-SRLALCRLTADTLKSGLGLLGI 584 Query: 580 ESPNEM 585 + M Sbjct: 585 ATLERM 590 >gi|187778219|ref|ZP_02994692.1| hypothetical protein CLOSPO_01811 [Clostridium sporogenes ATCC 15579] gi|187775147|gb|EDU38949.1| hypothetical protein CLOSPO_01811 [Clostridium sporogenes ATCC 15579] Length = 563 Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 132/576 (22%), Positives = 250/576 (43%), Gaps = 99/576 (17%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIE 111 L++ P IAE + +I + + V G ++N ++ + L K +L ++ + Sbjct: 44 LAKTFRKAPNLIAEELKEKINKEG-FEKVVTVGP-YVNFFVDKTVLIKDVLEKVLSEKEK 101 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG + +G+G + +E+ S N P H+GH +G+ L +++F GY ++ D G Sbjct: 102 YGSSKVGEGKNIVVEYSSPNIAKPFHIGHLFTTAIGNALYKILSFEGYNCIGINHLGDWG 161 Query: 172 AQINTLALSVF--WRYQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSEL-LNFPEE 227 Q L +S + W ++AL + G +Y+K H E + E LNF Sbjct: 162 TQFGKL-ISAYRRWVDEEALEKD----AIGELLRIYVKFHEEAEKDPELEKEARLNF--- 213 Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287 K L + + + LK N +D+ + D G+ S D +D + ++ Sbjct: 214 KNLEDGSEEETELWNRFKDLSLKEFNKVYDMLGIKFDSLAGE-SFYSDKMDAVVQE---- 268 Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRP---LLKSDGSYTYFAADLA- 339 +D K LL S ++ D+ + P + KSDG+ Y DLA Sbjct: 269 ----------------IDDKGLLVDSNGAKVVMLDEYNIPPCMIKKSDGATIYATRDLAA 312 Query: 340 --YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGM 396 Y K Y+ F IYV+G+ + + K++ + A + LV+L Sbjct: 313 AIYRKKTYD--FHKCIYVVGTPQALHFKQVFTTLKLMGHDWADDCKHVGFGLVKLANK-- 368 Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD------------FCKVKE 444 K+S R GD + L ++++ ++++ ++ KN L + + F +K Sbjct: 369 --KLSTRNGDVVFLEDLLNQSVEETLK--IINEKNPNLKNKEDTAKKLGIGAVVFTYLKN 424 Query: 445 QSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490 + + VF YV+Y+YAR +S+ R+A ++ ++D+ + + + E Sbjct: 425 NRERDIVFDWKEILSFDGETGPYVEYSYARGKSVLRKAGELTGEVDY-----SKLESKEE 479 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-SHGRENPRLRFVQ 549 F+ ++L L + I NA EP + Y+ ++A F+ + +HG + Sbjct: 480 FELAKL-----LGGFNDAIMNAINKLEPAMVTRYVIEVAKAFNKFYNAHG-------ILN 527 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A + + + R++LV A +I + LN++G++ EM Sbjct: 528 AEDNDVKLARVKLVEATCQVIKNALNLLGIDVVEEM 563 >gi|315185760|gb|EFU19526.1| arginyl-tRNA synthetase [Spirochaeta thermophila DSM 6578] Length = 587 Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 123/556 (22%), Positives = 227/556 (40%), Gaps = 76/556 (13%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE +VAR+ + V + AG G++NL+L ++ +LS I +G YG + + Sbjct: 65 PQKIAEEVVARLLPEGAVRKIEGAG-GYVNLFLDREAFALSVLSDIAHAGPGYGAGTLHQ 123 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 ++ +EF N P+H+GH R ++G++++ ++A G +V + IND G I L Sbjct: 124 DKRIMVEFSCPNTNKPLHLGHMRNNILGESVSRILASQGADVLKVNLINDRGIHICKSML 183 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 + + P+ + Y+K D + E W D V+ Sbjct: 184 AYKKFGEGKTPEEVGKKPDHFVGDFYVKFNEWAKTDSTAEEQARRMLRAWED--GDAEVR 241 Query: 240 AM--------MKIIRDDLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290 A+ ++ I + I D I+ D + G RD++ G Y+ Sbjct: 242 ALWEKMNRWAIEGIEQTYRRTGISFDKIYYESDTYLLG-----RDLVLKGLEDGVFYQ-- 294 Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGF 349 + + D+ + +G D + LL+SDG+ Y DL +Y+ F Sbjct: 295 ----EEDGSVWVDL---------SEIGLD-KKVLLRSDGTSLYLTQDLGTAVARYQDWAF 340 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ---------INV----------------- 383 D +IYV+ S+ + + + L V + A+ +N+ Sbjct: 341 DLLIYVVASEQNYHFRVLFYVLEKLGFSWAKNLYHLSYGMVNLPEGKMKSREGTVVDADD 400 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443 LL LV + R+ I+ R + + + + ++ + +L ++ + F+ K Sbjct: 401 LLDRLVEMARE--EIREKGRVDEVEDIDRTAEAIALGALHYFLLQVSPNKDMIFN-PKES 457 Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503 N Y+QY AR S+ R+A P L P +P D + +LIV L+ Sbjct: 458 LSLTGNTGPYLQYMGARICSMERKAD---PSLG---VPVEEVPTAELVDDASWELIVLLS 511 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 ++P V+E+A P + +LY+L F + +NP + N+ RL L Sbjct: 512 QFPEVVESAAREYNPSLVIGFLYELGKTFSSFY---HDNP---IITHPNKDTARARLALA 565 Query: 564 HAVASIINSGLNIIGV 579 + ++ +G ++ + Sbjct: 566 RGIRQVLENGFRLVNI 581 >gi|315127467|ref|YP_004069470.1| arginyl-tRNA synthetase [Pseudoalteromonas sp. SM9913] gi|315015981|gb|ADT69319.1| arginyl-tRNA synthetase [Pseudoalteromonas sp. SM9913] Length = 580 Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 135/582 (23%), Positives = 238/582 (40%), Gaps = 77/582 (13%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AM ++ + +P +A+ I+ ++ + + IAG GFIN++L P +L + + Sbjct: 37 GDYQINGAMGAAKKMKSNPRELAQKIIDQLDVSDIAEKTEIAGPGFINIHLKPEFLAQSV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + + + N K KV +++ S N MHVGH R ++GD + + F G V Sbjct: 97 QA-ANNHAKLAVNEHTKPQKVVVDYSSPNLAKEMHVGHLRSTIIGDAVVRALEFRGDTVV 155 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222 R+ ++ D G Q L + + Q + D D + + K D+ Sbjct: 156 RQNHMGDWGTQFGMLIAHLEDQINQGV---DLDTVALADLETFYRDAKKRFDDEE----- 207 Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282 F ++ +VK A + + A +++H SE+ + R + + D +A Sbjct: 208 GFADKARNYVVKLQGGDAHCEKLWKLFIATSVKH----SEEVYKRLNVTLTP--ADIMAE 261 Query: 283 QGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL---KSDGSYTYFAAD 337 Y E I+ K K + Q++F + D + KS G + Y D Sbjct: 262 SAYNSELNDIISLLKDKNI-AVESQGAQVVFLDELANKDGEPSAFIVQKSGGGFLYATTD 320 Query: 338 LAYFKCKYER---GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYR 393 LA C Y G + ++ + + S + ++E A + + + C + Sbjct: 321 LA--ACDYRSNKLGAERILIFVDARQSLHFNQVELTARKAGLLRDETSYEFCPFGTMMGA 378 Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD--------------F 439 DG P K R G + L +++E S + L + S+L D D + Sbjct: 379 DGKPFKT--RTGGTVKLADLLEE--SITRAAAKLAERESDLSDEDRSEIARKVGIGAVKY 434 Query: 440 CKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 + + + +F Y+QYAY R RSIFR++ L D+ + Sbjct: 435 ADLSKHRTSDYIFNWDSMLSFEGATAPYLQYAYTRVRSIFRKSGVDAASLKADV--SIIE 492 Query: 486 PQESEFDTSELQL--IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 PQE LQL ++ L +I AT P+ L YLY+LAS++ + P Sbjct: 493 PQEKTLALKLLQLEEVLDL-----MINEAT----PHVLCGYLYELASLYMTFY---EACP 540 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L+ + + RL L + VA + +GL+++G+E +M Sbjct: 541 VLK--EGVEPSVRDSRLVLCNLVADTLRTGLDLLGIEVMEQM 580 >gi|126207527|ref|YP_001052752.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20] gi|165975497|ref|YP_001651090.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|126096319|gb|ABN73147.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165875598|gb|ABY68646.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 548 Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 137/582 (23%), Positives = 239/582 (41%), Gaps = 82/582 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AM ++ LG++P A+ I+ ++ D + IAG GFIN++L+ ++L Sbjct: 10 GDYQANGAMGAAKKLGMNPREFAQKILDNADLNGIADKLEIAGPGFINIFLNQAWLAN-Q 68 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 +S + + +G T V I++ S N MHVGH R ++GD + + F G +V Sbjct: 69 ASEALQAVNFGIKTANPQTIV-IDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVI 127 Query: 163 REYYINDAGAQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221 R ++ D G Q L A + A SDL E +Y KE D S E+ Sbjct: 128 RANHVGDWGTQFGMLIAYLEKMENEHASQMELSDL-EAFY------RAAKEHYD--SDEV 178 Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS-PIRDIIDNL 280 F E+ +VK S + + L + + H+ ++++ R + + +D++ Sbjct: 179 --FAEKARNYVVKLQSGDEYCRTMWKKLVDITMHHN----QENYDRLNVTLSEKDVMGE- 231 Query: 281 ARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYF 334 +Y +LP + K + D ++F GD + + K DG + Y Sbjct: 232 ----SLYNPMLPEIVADLKAKGLAVEDDGALVVFLEEFKNKDGDPMGVIVQKKDGGFLYT 287 Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVR 390 D+A K +YE D ++ S + ++++ + A V E + + + Sbjct: 288 TTDIAAAKYRYETLNADRVLVFSDSRQAQHMQQAWLITRKAGYVPESFSLEHPFFGMM-- 345 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVR 423 L +DG P K R+G + L+ ++DE V SV+ Sbjct: 346 LGKDGKPFKT--RSGGTVKLKDLLDEAVERADKLISERSTDLTAEEKAAVVEAVAIGSVK 403 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + L + + FD+ + + N Y+QYAY R RSIF +A +D + Sbjct: 404 YSDLSKNRTTDYVFDWDNML-TFEGNTAPYMQYAYTRIRSIFNRA-----GIDVNGLNGE 457 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + E + E L V L ++ + P L YLY+LA F + P Sbjct: 458 INLTEDK----ERALAVKLLQFEEALNGVAKDGMPNILCQYLYELAGAFSSFY---EACP 510 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L + + RL L A + GL+++G+++ +M Sbjct: 511 MLNAEE----NVKNSRLSLAALTAKTLKQGLDLLGIKTIEKM 548 >gi|154504604|ref|ZP_02041342.1| hypothetical protein RUMGNA_02110 [Ruminococcus gnavus ATCC 29149] gi|153795086|gb|EDN77506.1| hypothetical protein RUMGNA_02110 [Ruminococcus gnavus ATCC 29149] Length = 587 Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 139/603 (23%), Positives = 250/603 (41%), Gaps = 101/603 (16%) Query: 36 RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95 RP C + N AM ++ P+ IA +VA ++ + GFINL + P Sbjct: 33 RPDLCEY---QCNGAMAAAKTYKKAPIMIANDVVAGLQEKDCFEIAEAVNPGFINLKVKP 89 Query: 96 SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155 S+ L+ + S + G + + +++ N P+HVGH R A++G+++ ++ Sbjct: 90 SFAAAFLNEMAASE-KLGVEEMETPKTIMVDYGGPNVAKPLHVGHLRSAIIGESVKRILR 148 Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD 215 + G +V + ++ D G Q+ + + R + Y +++ G YP +G EL + Sbjct: 149 YKGNKVIGDIHLGDWGYQMGLIITELQKRKPELPYFDENFT--GEYPKEAPFTIG-ELEE 205 Query: 216 KYSSELLNFPEEKWLPIVKDYSVQA-----------------MMKIIRDDLKA----LNI 254 Y + E + ++ ++QA +M + DLK LN+ Sbjct: 206 IYPTASAYAKEHEEY---REKALQATFLLQNGHPGFRAIWNHIMAVSVADLKKNYANLNV 262 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY--EGILPPPKSKTTQKCDMDRKQLLFR 312 D++ E D + P D+++ L +GY + EG L + T D+K++ Sbjct: 263 SFDLWKGEADAQKYIP----DMVEMLKEKGYAHYDEGALVVDVQEET-----DKKEV--P 311 Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVA 371 M+ LKSDG+ Y DLA + E D +IYV+ + ++ A Sbjct: 312 PCMI--------LKSDGAALYDTTDLATLVEREELYQPDEVIYVVDKRQELHFVQVFRCA 363 Query: 372 AAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430 K + + + +DG P K R G + L +++ E+ + + +M R Sbjct: 364 KKTGIVKPETELEFLGFGTMNGKDGKPFKT--REGGVMRLENLIREINEEMYKKIMDNRT 421 Query: 431 NSE-----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRSIF 465 SE L + + Q+ ++ VF Y+ Y R +SI Sbjct: 422 VSEEEAKKTAQMVGLAAIKYGDLSNQASKDYVFDVDRFTSFEGNTGPYILYTIVRIKSIL 481 Query: 466 R--QAKDIFPDLDFDLFPRNVIPQ-ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 Q ++ DL VI + SEF+ + L++ A++ VIE P+KL Sbjct: 482 NKYQEENSLEDL--------VIREASSEFEKA---LMLECAKFNDVIETVYEETAPHKLC 530 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 Y+YDLA+ F+ + E L A +K + L+L V + S ++++G E+P Sbjct: 531 AYIYDLANAFNKFY---HETKILSEEDAEKKKGYIALLKLTKEV---LESCIDLLGFEAP 584 Query: 583 NEM 585 M Sbjct: 585 ERM 587 >gi|331083052|ref|ZP_08332169.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA] gi|330405054|gb|EGG84591.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA] Length = 588 Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 133/631 (21%), Positives = 260/631 (41%), Gaps = 104/631 (16%) Query: 10 RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69 +++ +KE + ++K V RP C + N AM ++ P+ IA +V Sbjct: 7 KIEEAVKEAFAASEYDEKFAKVTVSNRPDLCEY---QCNGAMAAAKTYKKAPIMIANSVV 63 Query: 70 ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIE 126 +++ + +S GFINL L+ +L L+ ++ +E N + I+ Sbjct: 64 EKLQDNEMFESAEAVNPGFINLKLNKEFLSGYLNDMLADEKLSVEEAEN----PKTIVID 119 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 + N P+HVGH R A++G+++ + F G++V + ++ D G Q+ + + R Sbjct: 120 YGGPNVAKPLHVGHLRSAIIGESIKRMGRFLGHKVIGDVHLGDWGLQMGLIITELSKRQP 179 Query: 187 QALYNNDSDLPEGYYPG-----------VYLKHVGKELADK-YSSELLNFPEEKWLPIVK 234 +Y +++ EG YP +Y GK D+ Y +E L E L + K Sbjct: 180 DLVYFDEN--YEGEYPKEAPFTVSELEEIYPTASGKSKEDEAYKNEAL----EATLQLQK 233 Query: 235 ---DYSV--QAMMKIIRDDLK----ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285 Y Q +M++ DLK L + D++ E D P+ ++D L GY Sbjct: 234 GRRGYRALWQHIMEVSVTDLKKNYAKLKVDFDLWKGEADADAYIPA----MVDYLKENGY 289 Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFK 342 Y +D+ L+ D + P +LKSDG+ Y DLA Sbjct: 290 AY----------------LDQGALVVDVKEETDTKEIPPCMILKSDGASLYNTTDLATIV 333 Query: 343 CKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCELVRLYRDGMPIK 399 + E D +IYV+ + ++ A A + ++ Q++ + + +DG P K Sbjct: 334 QRMEDYKPDEIIYVVDKRQELHFVQVFRCAKKAKLVDENTQLSFVGFGTMN-GKDGKPFK 392 Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWR----KNSE-------LLDFDFCKVKEQSKE 448 R G + L ++ E+ + + + R +N+E L + + Q+ + Sbjct: 393 T--REGGVMRLERLIAEINEEMFKKITENRSVKDENAEKTAQMVGLSAIKYGDLSNQASK 450 Query: 449 NPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494 + VF Y+ Y R +SI + + ++D V + S Sbjct: 451 DYVFDIERFTSFEGNTGPYILYTIVRIKSILSRYAESGKNIDKKAMKAAV-------NDS 503 Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554 E L++ L+ + +I A + P+++ Y+YDLA+ F+ + + + + Sbjct: 504 EKALMLELSRFNSIIAPAFEEKAPHRICSYIYDLANAFNSFYHE------TKILSEEDED 557 Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L+ ++ + ++++G ++P+ M Sbjct: 558 KKASWICLLTLTEKVLETCIDLLGFDAPDRM 588 >gi|195157366|ref|XP_002019567.1| GL12462 [Drosophila persimilis] gi|194116158|gb|EDW38201.1| GL12462 [Drosophila persimilis] Length = 572 Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 122/508 (24%), Positives = 202/508 (39%), Gaps = 95/508 (18%) Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V +E+ S N P HVGH R ++G+ LA+L GY TR Y+ D G Q LAL V Sbjct: 115 VVVEYSSPNIAKPFHVGHLRSTIIGNVLANLHQHLGYRTTRLNYLGDWGTQFGLLALGV- 173 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE---------------E 227 Q +D D+ +Y +V A + + E+ + Sbjct: 174 ----QLTNVSDKDMQRAPIETLYRSYVAANKAAEENPEIAQRARDLFTALEAGTDDAMAQ 229 Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287 +W + Y+ + + + L + D + E + + I ++++ L G + Sbjct: 230 QWQQ-YRQYTTEELSGVY----NRLGVHFDSYEWESQYSQ---QQISEVLEKLRSAGLL- 280 Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347 ++++ R +V DD P++KSDGS Y A D+A ++ R Sbjct: 281 ------------------QREVDGREIVVVDDRRIPVIKSDGSTLYLARDIAALLERHSR 322 Query: 348 -GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406 F ++YV+ + + + L AA+ ++ L E ++ + G MS R G Sbjct: 323 LQFSRILYVVDNGQADHFNALFKTTAALDKR------LSLEQLKHVKFGRIHGMSTRQGK 376 Query: 407 FITLRHVVDEVGSDSVRFMMLW----RKNSELLDFDFCKV-----------KEQSKENPV 451 I LR V+DE D +R + R NS L D D C + K++ + + Sbjct: 377 AIFLRDVLDE-ARDVMREKRIQTQTTRSNSSLDDEDVCDILGVSAVLVNVLKQRRQRDHE 435 Query: 452 FYVQYA------------YARCR--SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497 F Q+A Y CR S+ + KDI DL+ D+ P S+ L Sbjct: 436 FSWQHALQVNGDTGIKLQYTHCRLHSLLQNFKDI--DLE-DIRPD--WQHYSQEPVDALD 490 Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557 L+ LA + + I + E L YL+ L + + R RL Q + Sbjct: 491 LLYELARFDQSIWQSKEQLEACVLVNYLFGLCN------ATSRALKRLPVKQESCPLKQS 544 Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L A + G+ ++G+ N+M Sbjct: 545 QRLLLFQAAKRTLQQGMQLLGLRPLNQM 572 >gi|149182270|ref|ZP_01860750.1| arginyl-tRNA synthetase [Bacillus sp. SG-1] gi|148850039|gb|EDL64209.1| arginyl-tRNA synthetase [Bacillus sp. SG-1] Length = 600 Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 153/615 (24%), Positives = 254/615 (41%), Gaps = 103/615 (16%) Query: 13 NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72 N L+E +++IL+ VIE P+ G LS L++ P IA + A + Sbjct: 47 NLLEEYLSGDMTKEEILE--VIETPKFTHQGDLSF-PCFQLAKKKKQAPTVIASELAASL 103 Query: 73 KIDPDVDSVFIAGKGFINLYL-SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131 + + A ++N++ + +I+ +I+ G YG G+G + I+ S N Sbjct: 104 SHSYLLKAE--AAGPYVNIFFDGKTTGTEIMKNILAQGDHYGELSFGEGKVITIDMSSPN 161 Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 P +GH R V+G+++A L G+E + YI D G Q L ++ + ++ Sbjct: 162 IAKPFSMGHLRSTVIGNSIALLAEKCGFETVKINYIGDWGTQFGKL-ITAYKKWGDEEKV 220 Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS---VQAMMKIIRDD 248 + +PE + +Y K + AD LN K +++D V+ + Sbjct: 221 KANPIPELF--SLYKKFHEEAEADP----ALNDEGRKAFKLLEDGDSEVVELWTWFKNES 274 Query: 249 LKALNIQHDIF-ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307 LKA +D+ IS D +H S D ++ A + +G+L S + +D K Sbjct: 275 LKAFQEIYDLLGISFDSYH--GESFYNDKME-AAVKLIKEKGLLET--SDGAEVVWLDDK 329 Query: 308 QLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSG 362 L P L KSDG+ Y D++ Y K Y+ F +YV+G + + Sbjct: 330 GL------------PPSLIKKSDGATLYATRDISAALYRKKTYD--FSQALYVVGQEQTI 375 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------ 416 + +++ AV + A+ V + L+ G KMS R G I L V+ E Sbjct: 376 HFRQVFAVLEKLGMPWAEQMVHIP--FGLFLQGGK-KMSTRKGRVILLEEVLKEAIDMAL 432 Query: 417 -------------------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYV 454 VG+ +V F L KN + D +F + + + P YV Sbjct: 433 ANIKEKNPNLENAEETARWVGTGAVIFHDL--KNDRMNDIEFSLEDMLTFEGETGP--YV 488 Query: 455 QYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 QY AR +SI R A + F LD D +LI L +YP +I+ Sbjct: 489 QYTNARAQSILRNAAAQELNHFTGLD---------------DHESWELIKILNKYPEIIQ 533 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A P LA Y+ ++ F+ ++ R + N L RL LV V I+ Sbjct: 534 EAYETYSPSVLAKYILAVSKAFNKYYGKTR-------ILEENVALA-SRLVLVKTVKDIL 585 Query: 571 NSGLNIIGVESPNEM 585 + GL ++G+++P +M Sbjct: 586 SDGLGLLGIKAPQQM 600 >gi|330501487|ref|YP_004378356.1| arginyl-tRNA synthetase [Pseudomonas mendocina NK-01] gi|328915773|gb|AEB56604.1| arginyl-tRNA synthetase [Pseudomonas mendocina NK-01] Length = 579 Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 53/170 (31%), Positives = 90/170 (52%), Gaps = 3/170 (1%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E +D +HG ++N AM+L++P G+ P +AE ++A + D + V IAG GF+N Sbjct: 30 IQVENTKDKSHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQITKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + L + L + + + G G +V ++ + N MHVGH R ++GD +A Sbjct: 90 FQNSDVLAQHLEAALADA-KLGVRKSGPTQRVVVDMSAPNLAKEMHVGHLRSTIIGDGVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYY 201 ++ F G V R+ ++ D G Q L L+ A + +DL EG+Y Sbjct: 149 RVLEFLGDTVIRQNHVGDWGTQFGML-LAYMQENPAAAESELADL-EGFY 196 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 63/155 (40%), Gaps = 19/155 (12%) Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 LR + VG SV++ L + + F+F + + N Y+ YAY R SIFR+ Sbjct: 420 LRQIARVVGIASVKYADLSKHRTSDYSFNF-DLMLSFEGNTAPYLLYAYTRVASIFRK-- 476 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 + +D + Q + E L LA++ ++ N P+ L YLYD+A Sbjct: 477 -LGKGVD------EIGGQITLVADQEQALAGKLAQFNELLGNVADKGTPHMLCAYLYDIA 529 Query: 530 SVFHGHWSH---------GRENPRLRFVQANNRKL 555 +F + + N RLR R L Sbjct: 530 GLFSSFYENCPILAAEDEATRNSRLRLAALTGRTL 564 >gi|322383445|ref|ZP_08057225.1| arginyl-tRNA synthase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152246|gb|EFX45072.1| arginyl-tRNA synthase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 567 Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 128/546 (23%), Positives = 232/546 (42%), Gaps = 93/546 (17%) Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGI---EYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140 A +INL+ +PS + +++ G+ E+G+ +G+G +V I+ S N P +GH Sbjct: 71 AAGPYINLFFTPS----VYGDLLLQGMMNPEFGKPDLGQGKRVIIDMSSPNIAKPFGIGH 126 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN-TLALSVFWRYQQALYNNDSDLPEG 199 R V+G+ L +L +G+E ++ D G Q + W ++ L + Sbjct: 127 LRSTVIGNALYNLYKETGFEPVSVNHLGDWGTQFGKQICAYKHWGSEEKLKADPI----- 181 Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI-QHDI 258 EL ++ E +PE ++D + K+ D A + ++ + Sbjct: 182 --------RESLELYVRFHEEAEQYPE------LEDEARGWFRKLETGDEDAKRLWEYFV 227 Query: 259 FISEDDFHRG-DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 +S ++F R D ++ D+ + + + I+P K+ Q ++ + + Sbjct: 228 KVSLNEFERMYDKLGVK--FDHTLGESFYNDKIVPVIKALKEQNL-LEESDGAYVVRL-- 282 Query: 318 DDVDRP---LLKSDGSYTYFAADLAYFKCKYE--RGFDNMIYVMGSDHSGYVKRLEAVAA 372 D+ P + KSDG+ Y DLA +++ +G D ++YV+G + + K++ AV Sbjct: 283 DEEGMPPCLITKSDGTTIYPTRDLATAIYRHDVMKG-DKLLYVVGGEQKLHFKQVFAVLG 341 Query: 373 AVSEKKAQINVLLCELVRL-YRDGMPIKMSKRAGDFITLR-------------------- 411 K + V CE V KMS R G ++L Sbjct: 342 ----KLGKTWVESCEHVPFGLMKFAGKKMSTRRGRVVSLEEVLQEAVNRAREIIEEKNPL 397 Query: 412 -----HVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463 HV + VG ++ F L KN+ + + DF + + P YVQY +AR +S Sbjct: 398 LPDKEHVAEAVGIGAIVFGDL--KNNRVNEIDFSLDEALNFDGETGP--YVQYTFARTQS 453 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDT----SELQLIVHLAEYPRVIENATIAQEPY 519 + +A + +F L I S+ ++ S QLI L+ YP+ IE A EP Sbjct: 454 VLAKA-----EWNFSLADCKNILSHSDLNSINHSSVWQLIKQLSLYPQAIERAVKRNEPS 508 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 +A Y + A F+ ++ R + A + K +L + A A II L+++G+ Sbjct: 509 VVARYALETAKAFNRFYNLNR-------ILAEDEKEQKAKLIVTTAAAEIIRRSLHLLGL 561 Query: 580 ESPNEM 585 ++P +M Sbjct: 562 KTPKQM 567 >gi|119719478|ref|YP_919973.1| arginyl-tRNA synthetase [Thermofilum pendens Hrk 5] gi|119524598|gb|ABL77970.1| arginyl-tRNA synthetase [Thermofilum pendens Hrk 5] Length = 635 Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 146/607 (24%), Positives = 243/607 (40%), Gaps = 165/607 (27%) Query: 88 FINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 F+NL + Y + SS+V G YG ++ +E VSANP P+HVGH R V+ Sbjct: 85 FLNLVVDEKRYAEVVYSSVVRLGDNYGFVPAETRERIIVEHVSANPIHPLHVGHLRNGVL 144 Query: 147 GDTLASLMAFSGYEVT-----------------------------REYYINDAGAQINTL 177 GD+L L+ G+EV +++++ IN L Sbjct: 145 GDSLVRLLRARGHEVKAHFYVDDVGLQVAYAAKAFSIVGGEGQGKKDHFVGTLYTAINLL 204 Query: 178 ALSVFWRYQQALYNNDSDLPE-GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236 + V ++A + +L E YL +G EL++K+ + E W+ +D Sbjct: 205 -IEVKKLREKAKSASGDELAEINSKVSEYLWRLG-ELSEKFPGLIEKLLE--WVEKTEDP 260 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP--------------IRDIIDNLAR 282 + L+ LN ++ GDPS IR+ +D L Sbjct: 261 EAE---------LRRLNRMYE---------EGDPSTVKLTRRVLDYCLEGIRETLDRLGI 302 Query: 283 Q--GYVYEGILPPPKSKTTQKCD-------MDRKQ--LLFRSTMVGD--DVDRP------ 323 + +E L T+ D ++R+ L+FR+ ++ + DV R Sbjct: 303 SFDSWDWESELTVWSGATSDVIDKLRGLGLVERRDGALVFRADLLAESEDVRRAAGIPPG 362 Query: 324 -------LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 L++SDG+ Y D+AY K R D +I V+ AV + Sbjct: 363 FTVTPMTLVRSDGTTLYTTRDIAYSIWKLSRA-DRVINVI----------------AVQQ 405 Query: 377 KKAQINVLLCELVRLYRD-------------GMP-IKMSKRAGDFITLRHVVDE------ 416 AQ + L YRD +P +MS R G +++ V++E Sbjct: 406 TLAQAQLRLALYALGYRDVGRRLIHYSYEMVNLPGTRMSSRRGVYVSADEVIEEAVARAK 465 Query: 417 ----------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460 VG +++F L + ++L FD+ +V + ++N +VQY+Y R Sbjct: 466 EEIAKRGVGDVGDAEKVGIGALKFFFLSQTPGKVLTFDWKRVLD-FEQNSGPFVQYSYVR 524 Query: 461 CRSIFRQAKD--IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 I R+A + I PD NV + E LI+ + E+P V++ A P Sbjct: 525 ALGILRKASEEHIRPD------ELNV----GDVGEEEHPLILLVGEFPNVVKEAADNLRP 574 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 LA YL LA+ F+ ++ P LR ++K + RL +V V + +G+ ++G Sbjct: 575 DLLASYLNTLATEFNRYYDS---YPVLR-APTTSKKYS--RLAVVKMVEQTLKNGMKLLG 628 Query: 579 VESPNEM 585 +E+P M Sbjct: 629 IEAPQRM 635 >gi|119468958|ref|ZP_01611983.1| arginyl-tRNA synthetase [Alteromonadales bacterium TW-7] gi|119447610|gb|EAW28877.1| arginyl-tRNA synthetase [Alteromonadales bacterium TW-7] Length = 580 Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 140/583 (24%), Positives = 235/583 (40%), Gaps = 79/583 (13%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AM ++ + +P +A+ I+ + + + IAG GFIN++L P +L K + Sbjct: 37 GDYQINGAMGAAKKMKSNPRELAQKIIDNLDVTDIAEKTEIAGPGFINIHLKPEFLAKSV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + S + N V +++ S N MHVGH R ++GD + + F G +V Sbjct: 97 EA-ANSDAKLAVNEHANPQTVVVDYSSPNLAKEMHVGHLRSTIIGDAIVRALEFRGDKVI 155 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG-KELADKYSSEL 221 R+ ++ D G Q L + L + GV L+ V +L Y Sbjct: 156 RQNHMGDWGTQFGMLI---------------AHLEDQISQGVDLESVALADLETFYRDAK 200 Query: 222 LNF-PEEKWLPIVKDYSVQAMMKIIR-DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279 F EE + +DY V+ + L L I + SE+ + R + + + D Sbjct: 201 KRFDDEEGFADKARDYVVKLQGGDAHCEKLWKLFIATSVKHSEEVYKRLNVTLTQ--ADI 258 Query: 280 LARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL---KSDGSYTYF 334 +A Y E I+ K K + Q++F + D + KS G + Y Sbjct: 259 MAESAYNSELNDIISLLKDKNI-AVESQGAQVVFLDELANKDGEPSAFIVQKSGGGFLYA 317 Query: 335 AADLAYFKCKYER---GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VR 390 DLA C Y G + ++ + + S + ++E A + + + C Sbjct: 318 TTDLA--ACDYRSNKLGAERILIFVDARQSLHFNQVELTARKAGLLRDETSYEFCPFGTM 375 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD------------ 438 + DG P K R G + L +++E S S L + S+L D + Sbjct: 376 MGADGKPFKT--RTGGTVKLADLLEE--SISRAATKLAERESDLSDHERSEIARKVGIGA 431 Query: 439 --FCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 + + + + +F Y+QYAY R RSIFR++ L+ D+ Sbjct: 432 VKYADLSKHRTSDYIFNWDSMLSFEGATAPYLQYAYTRVRSIFRKSGVDAASLNADVAIA 491 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 PQE LQL L +I AT P+ L YLY+LAS++ + Sbjct: 492 E--PQEKALALKLLQLEEVL---DLMISEAT----PHVLCGYLYELASLYMTFY---EAC 539 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P L+ + + RL L + VA + +GL+++G+E +M Sbjct: 540 PVLK--EGVEPSVRDSRLVLCNLVADTLKTGLDLLGIEVMEQM 580 >gi|150003650|ref|YP_001298394.1| arginyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482] gi|254881121|ref|ZP_05253831.1| arginyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA] gi|319640128|ref|ZP_07994855.1| arginyl-tRNA synthetase [Bacteroides sp. 3_1_40A] gi|166232757|sp|A6KZA8|SYR_BACV8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|149932074|gb|ABR38772.1| arginyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482] gi|254833914|gb|EET14223.1| arginyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA] gi|317388406|gb|EFV69258.1| arginyl-tRNA synthetase [Bacteroides sp. 3_1_40A] Length = 606 Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 134/587 (22%), Positives = 234/587 (39%), Gaps = 129/587 (21%) Query: 76 PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK----VNIEFVSAN 131 P++ S + A KGF+NL ++ ++L+SI + EYG I K T+ V IE+ S N Sbjct: 72 PELVSAYNAVKGFLNLTIASDCWIELLNSIQAAP-EYG---IEKATENSPLVMIEYSSPN 127 Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 P+H+GH R ++G+ LA++MA +G +V + +ND G I L+ W L Sbjct: 128 TNKPLHLGHVRNNLLGNALANVMAANGNKVVKTNIVNDRGIHICKSMLA--W-----LKY 180 Query: 192 NDSDLPE----------GYYPGVYLKHVG---KELADKYSSELLNFPE------------ 226 + + PE G Y + KH KEL +Y +E LN E Sbjct: 181 GNGETPESSGKKGDHLIGDYYVAFDKHYKAEVKELTAQYQAEGLNEEEAKAKAEANSPLM 240 Query: 227 -------EKWLPIVKDYSVQAMMKIIRD--------DLKALNIQHD-IFISEDDFHRGDP 270 KW D ++A+ K + D K + + D I+ + + G Sbjct: 241 LEAREMLRKWE--ANDPEIRALWKKMNDWVYAGFDETYKMMGVSFDKIYYESNTYLEGKE 298 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + + +G+ Y K + D+ T G D + LL+ DG+ Sbjct: 299 KVMEGL-----EKGFFYR------KEDNSVWADL---------TAEGLD-HKLLLRGDGT 337 Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 Y D+ K +++ + MIYV+G++ + + + L + + + + V + Sbjct: 338 SVYMTQDIGTAKLRFQDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEWGKGLVHFSYGM 397 Query: 390 RLYRDGMPIKMSKRAGDFI----TLRHVVDEVGSDSVRFMMLWRKNSELLD--------- 436 +G KM R G + + +++ S L E D Sbjct: 398 VELPEG---KMKSREGTVVDADDLMEAMIETAKETSAELGKLDGLTQEEADNIARIVGLG 454 Query: 437 -FDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKD---IFPDLDFD 478 + +K +++N F ++QY YAR +S+ R+A + + P+ Sbjct: 455 ALKYFILKVDARKNMTFNPKESIDFNGNTGPFIQYTYARIQSVLRKAAEAGIVIPE---- 510 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 +IP E E LI LA++ V++ A P +A Y YDL ++ + Sbjct: 511 -----IIPAGLELSAKEEGLIQMLADFKSVVKQAGSDYNPSIIANYAYDLVKEYNQFYHD 565 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ N L + RL L V I+ + + ++G+E P M Sbjct: 566 ------FSILREENEALKVFRLALSANVGKIVKTAMGLLGIEVPERM 606 >gi|199598041|ref|ZP_03211465.1| Arginyl-tRNA synthetase [Lactobacillus rhamnosus HN001] gi|199591131|gb|EDY99213.1| Arginyl-tRNA synthetase [Lactobacillus rhamnosus HN001] Length = 560 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 142/589 (24%), Positives = 247/589 (41%), Gaps = 91/589 (15%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P+ G + L++ L P IA +VA+I P + V G G++N Y Sbjct: 27 LVETPKSSDLGDFAF-PTFSLAKILHQAPKMIASDLVAKIDASP-FEQVKAVG-GYVNFY 83 Query: 93 LSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S+ ++L +I SG +G +G+G V I+ S N PM +GH R V+G+ LA Sbjct: 84 LDKISFAHEVLKAIAQSGEHFGDAKLGEGN-VPIDMSSPNIAKPMSMGHLRSTVIGNALA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHV 209 +++ GY + ++ D G Q L ++ +A D +L + Y + Sbjct: 143 NILQKVGYSPIKINHLGDWGTQFGKLIVAYKKWGSEADVKADPIKNLLQYYVKFHEVAET 202 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRD-DLKALNIQHDIFISEDDFH 266 EL D+ + W ++D +A + + R L N + I + D + Sbjct: 203 DPELEDEARA---------WFKRLEDGDKEAITLWRWFRTVSLAEFNRIYKILGVDFDSY 253 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 G+ + D +D++ + E S+ + D+ + L + L+K Sbjct: 254 NGE-AFYNDKMDSVVK---TLEDKHLLKTSQGAEIVDLSKYNL-----------NPALIK 298 Query: 327 SDGSYT-YFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 T Y DLA + E F +YV+G++ + ++L+AV + + A ++ Sbjct: 299 KSDGATLYMTRDLAAAIFRKEHYHFVQSLYVVGNEQREHFQQLKAVLLEMGYEWAN-DIH 357 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------------------------EVGS 419 + +G K+S R G+ I L V+ EVG Sbjct: 358 HIPFGLITANGK--KLSTRRGNIILLEKVLKDAVGLAQQQIDEKHPDLPNAEKVAHEVGV 415 Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 +V F L KN L +FDF V+ + + P YVQY AR SI R+A I P Sbjct: 416 GAVIFHDL--KNERLDNFDFNLEEVVRFEGETGP--YVQYTNARAHSILRKAS-IAP--- 467 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 P+ + D + ++ L +YP ++ A EP +A Y LA F+ ++ Sbjct: 468 --------APEVALSDPAAWDVLRALGDYPSIVVRAAKEYEPSVIAKYALRLAKAFNKYY 519 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + V + +L RL +V A ++ + L+++GV +P EM Sbjct: 520 ANVK-------VLVEDSELP-ARLAMVAATTQVLENALHLLGVAAPEEM 560 >gi|328698469|ref|XP_001949420.2| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Acyrthosiphon pisum] Length = 592 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 135/590 (22%), Positives = 253/590 (42%), Gaps = 102/590 (17%) Query: 48 NAAMILSRPLGLDPLTIAELIVARIKID-----PDVDSVFIAGKGFINLYLSPSYLRKIL 102 NA+M + + L ++ +VA+ +D ++ V ++G+GFIN++LS + LR IL Sbjct: 53 NASMQICKLLKAKGENVSPNVVAKKLVDCLGQCNIIEKVDVSGQGFINVWLSRNKLRDIL 112 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 ++ + ++ + K+ ++F + N MHVGH R ++G++L+ + F G++V Sbjct: 113 QYVLENKLK--PKPLTNPQKIIVDFSAPNVAKEMHVGHLRSTIIGESLSRVFEFIGHDVL 170 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222 R +I D G Q L + Q N ++ P P L+ K+ + S+ L Sbjct: 171 RINHIGDWGTQFGMLIALL----QDKFPNYKTESP----PIKDLQQFYKQSKVLFDSD-L 221 Query: 223 NFPEEKWLPIVKDYS-----VQA---MMKIIRDDLKALNIQHDIFISEDDFHRGDP---S 271 F + + +VK S VQA + + R + + + + +I I E RG+ S Sbjct: 222 EFKKRAYDCVVKLQSMSPDHVQAWKLICDVSRKEFQKIYERLNISIIE----RGESFYQS 277 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + ++ +L +G++ D +++++ + ++KSDG + Sbjct: 278 RMETVVKDLEEKGFLEND---------------DGRKIMWSPE---SSIPLTVVKSDGGF 319 Query: 332 TYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVA---AAVSEKKAQINVLLCE 387 TY +D+A K + E D +IYV+ + S + + L+ A + K +++ + Sbjct: 320 TYDTSDIATLKQRIEEEKADWIIYVVDAGQSLHFETLKKCAIHSGFLDPSKVRMDFVGFG 379 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS- 446 +V L D K R+GD + L ++DE G R ++ + ++L + K+ E + Sbjct: 380 VV-LGEDKK--KFKTRSGDTVRLASLLDE-GIKRTRDKLVEKGRDKVLTDEELKLAETAL 435 Query: 447 ----------------------------KENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 K N Y+ YA R RSI DL+ Sbjct: 436 AYGCIKYADLCHNRNHDYVFSFDKMLDDKGNTAVYLLYALTRIRSIINNLGTYTQDLNE- 494 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 P + D E +L L +P VI T + L YLYD+A+ F + + Sbjct: 495 -------PISLDHD-KEWKLAKTLLRFPEVISKITDDFCLHHLCEYLYDVATTFSEFYDN 546 Query: 539 G---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +NP+ + K+ R+ L A + +GLN++G+ + + M Sbjct: 547 CYCIEKNPQTGEIV----KVFTGRILLCKVTAEYMETGLNLLGISTVSRM 592 >gi|226948350|ref|YP_002803441.1| arginine--tRNA ligase [Clostridium botulinum A2 str. Kyoto] gi|254782953|sp|C1FK28|SYR_CLOBJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|226843718|gb|ACO86384.1| arginine--tRNA ligase [Clostridium botulinum A2 str. Kyoto] Length = 563 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 134/576 (23%), Positives = 249/576 (43%), Gaps = 99/576 (17%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIE 111 L++ P IAE + +I + + V G ++N ++ + L K +L ++ + Sbjct: 44 LAKTFRKAPNLIAEELKEKINKEG-FEKVVTVGP-YLNFFVDKTILIKDVLEKVLSEKEK 101 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG + +G+G V +E+ S N P H+GH +G+ L +++F GY ++ D G Sbjct: 102 YGSSKVGEGKNVVVEYSSPNIAKPFHIGHLFTTAIGNALYKILSFEGYNCIGINHLGDWG 161 Query: 172 AQINTLALSVF--WRYQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSEL-LNFPEE 227 Q L +S + W ++AL + G +Y+K H E + E LNF Sbjct: 162 TQFGKL-ISAYRRWVDEEALEKD----AIGELLRIYVKFHEEAEKDPELEKEARLNF--- 213 Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287 K L + + + LK N +D+ + D G+ S D +D + ++ Sbjct: 214 KRLEEGSEEETELWNRFKDLSLKEFNKVYDMLGIKFDSLAGE-SFYSDKMDAVVQE---- 268 Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRP---LLKSDGSYTYFAADLA- 339 +D K LL S ++ D+ + P + KSDG+ Y DLA Sbjct: 269 ----------------IDDKGLLVDSNGAKVVMLDEYNMPPCMIKKSDGATIYATRDLAA 312 Query: 340 --YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGM 396 Y K Y+ F IYV+G+ + + K++ + A + LV+L Sbjct: 313 AIYRKKTYD--FHKCIYVVGTPQALHFKQVFTTLKLMGHDWADDCKHVGFGLVKLANK-- 368 Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD------------FCKVKE 444 K+S R GD + L ++++ ++++ ++ KN L + + F +K Sbjct: 369 --KLSTRNGDVVFLEDLLNQSVEETLK--IINEKNPNLKNKEDVAKKLGIGAVVFTYLKN 424 Query: 445 QSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490 + + VF YV+Y+YAR +SI R+A ++ + D+ + + + E Sbjct: 425 NRERDIVFDWKEILSFDGETGPYVEYSYARGKSILRKAGELTGEADY-----SKLSSKEE 479 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-SHGRENPRLRFVQ 549 F+ ++L L + I NA EP + Y+ ++A F+ + +HG + Sbjct: 480 FELAKL-----LGGFNDAIMNAIDKLEPAMVTRYIIEVAKAFNKFYNAHG-------ILN 527 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A + + + R++LV A +I + LN++G++ EM Sbjct: 528 AEDNDVKLARVKLVEATCQVIKNALNLLGIDVVEEM 563 >gi|167036128|ref|YP_001671359.1| arginyl-tRNA synthetase [Pseudomonas putida GB-1] gi|189083542|sp|B0KN43|SYR_PSEPG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|166862616|gb|ABZ01024.1| arginyl-tRNA synthetase [Pseudomonas putida GB-1] Length = 578 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 1/146 (0%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE ++ + D+ V IAG GF+N Sbjct: 30 IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLINALPASADISKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + L L + + G G KV I+ + N MHVGH R ++GD++A Sbjct: 90 FQNTDALANRLDAALADA-RLGVRKAGPSEKVVIDMSAPNLAKEMHVGHLRSTIIGDSVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177 ++ F G V R+ ++ D G Q L Sbjct: 149 RVLEFLGDNVIRQNHVGDWGTQFGML 174 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 19/155 (12%) Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 LRH+ + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 419 LRHIGEVVGIGAVKYADLSKHRTSDYSFNF-ELMLNFEGNTAPYLLYAYTRVAGVFRKLG 477 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 FD N++ Q + E L LA++ ++ N P+ L YLYDLA Sbjct: 478 K-----GFDEVEGNIVLQAAH----EQDLAARLAQFGEILNNVADKGTPHVLCSYLYDLA 528 Query: 530 SVFHGHWSH---------GRENPRLRFVQANNRKL 555 +F + + ++ RLR R L Sbjct: 529 GLFSSFYENCPILAAETLEQQQSRLRLAALTGRTL 563 >gi|226509531|ref|NP_001141350.1| hypothetical protein LOC100273441 [Zea mays] gi|194704118|gb|ACF86143.1| unknown [Zea mays] Length = 604 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 128/591 (21%), Positives = 230/591 (38%), Gaps = 141/591 (23%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P I + I + ++S +AG GF+N+ LS ++ + + ++V+GI+ ++ Sbjct: 78 NPNAIGQAIAKNLPSSDIIESTSVAGPGFVNIVLSNRWVAQRIQDMLVNGIKTWAPILPV 137 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA- 178 V I+F S N MHVGH R ++GDTLA + FS +V R ++ D G Q L Sbjct: 138 KRAV-IDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSNVDVLRRNHVGDWGTQFGMLIE 196 Query: 179 -------------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 L +F++ + ++ND + GV G+E +Y Sbjct: 197 YLFEKFPNWQEIGSQAIGDLQIFYKASKHRFDNDPEFKARAQQGVVRLQGGEE---RY-- 251 Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279 E W I I R + + + ++ + E +P I +++ Sbjct: 252 ------REAWKKIC---------DISRSEFDLVYKRLNVVLEEKGESFYNPY-IPQVLEE 295 Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339 L+ +G + E + +++F + G + ++KSDG + Y + DLA Sbjct: 296 LSSKGLIKES---------------EGARVIF---IQGHQIPLIVVKSDGGFNYASTDLA 337 Query: 340 --YFKCKYERGFDNMIY-----------------------------------------VM 356 +++ E+ + +IY V+ Sbjct: 338 ALWYRLNVEQA-EWIIYVTDVGQQQHFDMFFSAAKMAGWLPGPNEKKFPKTSHVGFGLVL 396 Query: 357 GSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 GSD + V+ +E + A S K+++ L RL +G + + Sbjct: 397 GSDGKRFRTRSTEVVRLVELLDEAKSRSKSEL------LQRLTENGKIVDWTDEE----- 445 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS-KENPVFYVQYAYARCRSIFRQA 468 L + VG +V++ L KN+ L ++ F + S K N Y+QYA+AR SI R++ Sbjct: 446 LEQTSEAVGYGAVKYADL--KNNRLTNYTFSFEQMLSDKGNTAVYLQYAHARICSIIRKS 503 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 DL P E L ++L + V+E A P + YLY+L Sbjct: 504 NKDVEDLKMTGAISLDHPDER-------VLGLYLIRFAEVVEEACTNLLPNVVCEYLYNL 556 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 + +F +++ Q RL L A A ++ N++G+ Sbjct: 557 SEMFTKFYTN---------CQVVGSPEETSRLLLCQATAVVMRQCFNLLGI 598 >gi|168182924|ref|ZP_02617588.1| arginine--tRNA ligase [Clostridium botulinum Bf] gi|182674025|gb|EDT85986.1| arginine--tRNA ligase [Clostridium botulinum Bf] Length = 563 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 134/576 (23%), Positives = 249/576 (43%), Gaps = 99/576 (17%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIE 111 L++ P IAE + +I + + V G ++N ++ + L K +L ++ + Sbjct: 44 LAKTFRKAPNLIAEELKEKINKEG-FEKVVTVGP-YLNFFVDKTILIKDVLEKVLSEKEK 101 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG + +G+G V +E+ S N P H+GH +G+ L +++F GY ++ D G Sbjct: 102 YGSSKVGEGKNVVVEYSSPNIAKPFHIGHLFTTAIGNALYKILSFEGYNCIGINHLGDWG 161 Query: 172 AQINTLALSVF--WRYQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSEL-LNFPEE 227 Q L +S + W ++AL + G +Y+K H E + E LNF Sbjct: 162 TQFGKL-ISAYRRWVDEEALEKD----AIGELLRIYVKFHEEAEKDPELEKEARLNF--- 213 Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287 K L + + + LK N +D+ + D G+ S D +D + ++ Sbjct: 214 KRLEEGSEEETELWNRFKDLSLKEFNKVYDMLGIKFDSLAGE-SFYSDKMDAVVQE---- 268 Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRP---LLKSDGSYTYFAADLA- 339 +D K LL S ++ D+ + P + KSDG+ Y DLA Sbjct: 269 ----------------IDDKGLLVDSNGAKVVMLDEYNMPPCMIKKSDGATIYATRDLAA 312 Query: 340 --YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGM 396 Y K Y+ F IYV+G+ + + K++ + A + LV+L Sbjct: 313 AIYRKKTYD--FHKCIYVVGTPQALHFKQVFTTLKLMGHDWADDCKHVGFGLVKLANK-- 368 Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD------------FCKVKE 444 K+S R GD + L ++++ ++++ ++ KN L + + F +K Sbjct: 369 --KLSTRNGDVVFLEDLLNQSVEETLK--IINEKNPNLKNKEDVAKKLGIGAVVFTYLKN 424 Query: 445 QSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490 + + VF YV+Y+YAR +SI R+A ++ + D+ + + + E Sbjct: 425 NRERDIVFDWKEILSFDGETGPYVEYSYARGKSILRKAGELTGEADY-----SKLSSKEE 479 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-SHGRENPRLRFVQ 549 F+ ++L L + I NA EP + Y+ ++A F+ + +HG + Sbjct: 480 FELAKL-----LGGFNDAIMNAIDKLEPAMVTRYVIEVAKAFNKFYNAHG-------ILN 527 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A + + + R++LV A +I + LN++G++ EM Sbjct: 528 AEDNDVKLARVKLVEATCQVIKNALNLLGIDVVEEM 563 >gi|159475080|ref|XP_001695651.1| hypothetical protein CHLREDRAFT_119290 [Chlamydomonas reinhardtii] gi|158275662|gb|EDP01438.1| predicted protein [Chlamydomonas reinhardtii] Length = 589 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 127/562 (22%), Positives = 219/562 (38%), Gaps = 87/562 (15%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A I+A + + + +AG GFIN+ L+ L + + S++ G+ G Sbjct: 68 PRDVANAILAALPANDLISETSLAGPGFINIRLNKDALARRVGSMLTDGLAKFAPEGHAG 127 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KV I+F S N MHVGH R ++GDTL + + G +V R ++ D G Q L Sbjct: 128 KKVVIDFSSPNVAKEMHVGHLRSTIIGDTLCRVFEYCGSDVLRLNHVGDWGTQFGMLIEH 187 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 + + + D D+ +L + Y + F EE+ K + +A Sbjct: 188 MADTRKARDADKDEDVA--------------DLQELYRAAKKRFDEEEEF---KTRAREA 230 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY--VYEGILPPPKSKT 298 + ++ D +L I + + + + Y + +GI+ K Sbjct: 231 VTRLQSGDATSLASWQRICAASRREFEALYTRLGVTLQERGESFYNPMLKGIVDGLKETG 290 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMG 357 D D +F + G V + KSDG + Y + D+A + E D +IYV Sbjct: 291 VATID-DGATCVF---VEGQSVPLIVQKSDGGFGYASTDMAALHHRLNEEKADWIIYVTD 346 Query: 358 SDHS-------GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 S G K+ + A K + + L L DG + R+GD + L Sbjct: 347 VGQSQHFELVFGAAKKAGWLKEAAGPKVSHVGFGLV----LGEDGK--RFRTRSGDLVRL 400 Query: 411 RHVVDE-------------------------------VGSDSVRFMMLWRKNSELLDFDF 439 ++DE +G +V++ L + F F Sbjct: 401 VELLDEAKSRCAATIRERRQEAGEEIVEAEVEEAACAMGYGAVKYADLKNHRTTNYKFSF 460 Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498 + K N Y+ YA+AR I R+ KD++ L + E EL+L Sbjct: 461 DDML-NLKGNTAVYLLYAHARIAGIVRKGGKDVYA-----LAASTPVTLEH---PKELEL 511 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 +HL + P +E+A P ++ YLYDL+ F+ + + V + ++ + Sbjct: 512 ALHLTKLPEALEDAIEELAPNRITDYLYDLSEKFNSFYVDCK-------VLGSEQEAS-- 562 Query: 559 RLQLVHAVASIINSGLNIIGVE 580 RL LV A A ++ ++G++ Sbjct: 563 RLLLVEATAVVMRKCFELLGIK 584 >gi|319424887|gb|ADV52961.1| arginyl-tRNA synthetase [Shewanella putrefaciens 200] Length = 581 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 52/147 (35%), Positives = 84/147 (57%), Gaps = 2/147 (1%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 RI ++R +D +HG L+TN AM+L++ G +P +A+LI+ + V V IAG GFIN Sbjct: 29 RIQVDRTKDKSHGDLATNLAMMLTKVAGKNPRELAQLIIDTLPASAFVAKVEIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +++ S L + L + V+ G L T V +++ S N MHVGH R ++GD++ Sbjct: 89 FFINDSALAEQLQN-AVNDEHLGIKLPTPQTVV-VDYSSPNLAKEMHVGHLRSTIIGDSV 146 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTL 177 + F G++V R+ ++ D G Q L Sbjct: 147 VRALEFLGHKVIRQNHVGDWGTQFGML 173 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 85/206 (41%), Gaps = 26/206 (12%) Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439 + NV ELVR M D TL + VG +V++ L + + F F Sbjct: 402 EANVRALELVRSKNPDM---------DEETLAEIARVVGISAVKYADLSKNRTSDYIFSF 452 Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 ++ + N Y+ YAY R IF++ + DL + V+ E E D Sbjct: 453 EQML-SFEGNTAPYLLYAYTRIAGIFKRVTGL--DLSQ---AKIVLEHEKEKDLGN---- 502 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 LA++ ++ +P+ L YLY+LA F + P L A+N + R Sbjct: 503 -KLAQFGEILNRVVDKGQPHVLCAYLYELAGAFSSFY---EACPVL---AADNDEQKNSR 555 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L A + GLN++G+E+ M Sbjct: 556 LLLSQLTARTLQKGLNLLGIETLERM 581 >gi|53729104|ref|ZP_00134063.2| COG0018: Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 575 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 137/582 (23%), Positives = 238/582 (40%), Gaps = 82/582 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AM ++ LG++P A+ I+ ++ D + IAG GFIN++L+ ++L Sbjct: 37 GDYQANGAMGAAKKLGMNPREFAQKILDNADLNGIADKLEIAGPGFINIFLNQAWLAN-Q 95 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 +S + + +G T V I++ S N MHVGH R ++GD + + F G +V Sbjct: 96 ASEALQAVNFGIKTANPQTIV-IDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVI 154 Query: 163 REYYINDAGAQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221 R ++ D G Q L A + A SDL E +Y KE D S E+ Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHASQMELSDL-EAFY------RAAKEHYD--SDEV 205 Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS-PIRDIIDNL 280 F E+ +VK S + + L + + H+ ++++ R + + +D++ Sbjct: 206 --FAEKARNYVVKLQSGDEYCRTMWKKLVDITMHHN----QENYDRLNVTLSEKDVMGE- 258 Query: 281 ARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYF 334 +Y +LP + K + D ++F GD + + K DG + Y Sbjct: 259 ----SLYNPMLPEIVADLKAKGLAVEDDGALVVFLEEFKNKDGDPMGVIVQKKDGGFLYT 314 Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVR 390 D+A K +YE D ++ S + ++++ + A V E + + + Sbjct: 315 TTDIAAAKYRYETLNADRVLVFSDSRQAQHMQQAWLITRKAGYVPESFSLEHPFFGMM-- 372 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVR 423 L +DG P K R+G + L+ ++DE V SV+ Sbjct: 373 LGKDGKPFKT--RSGGTVKLKDLLDEAVERADKLISERSTDLTAEEKAAVVEAVAIGSVK 430 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + L + + FD+ + + N Y+QYAY R RSIF +A +D + Sbjct: 431 YSDLSKNRTTDYVFDWDNML-TFEGNTAPYMQYAYTRIRSIFNRA-----GIDVNGLNGE 484 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + E + E L V L ++ + P L YLY+LA F + P Sbjct: 485 INLTEDK----ERALAVKLLQFEEALNGVAKDGMPNILCQYLYELAGAFSSFY---EACP 537 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L + RL L A + GL+++G+++ +M Sbjct: 538 MLNA----EENVKNSRLSLAALTAKTLKQGLDLLGIKTIEKM 575 >gi|225574920|ref|ZP_03783530.1| hypothetical protein RUMHYD_02999 [Blautia hydrogenotrophica DSM 10507] gi|225037888|gb|EEG48134.1| hypothetical protein RUMHYD_02999 [Blautia hydrogenotrophica DSM 10507] Length = 588 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 129/610 (21%), Positives = 256/610 (41%), Gaps = 108/610 (17%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK-GFINL 91 V RP C + N AM ++ P+ IA+ +V ++ D V S+ A K GFINL Sbjct: 30 VSNRPDLCEY---QCNGAMAGAKAYHKAPIVIAQDVVEKLS-DSQVFSMAEAVKPGFINL 85 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + ++L L + + + G + I++ N P+HVGH R A++G+++ Sbjct: 86 KIKETFLSGYLQKMHTAQL-LGAEKTQNPKTIIIDYGGPNVAKPLHVGHLRSAIIGESIK 144 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-------DLP------E 198 + F G+E+ + ++ D G Q+ + + R + +Y ++S + P E Sbjct: 145 RMGRFLGHEMIGDVHLGDWGLQMGLIITELKHRQPELVYFDESYEGEYPKEAPFTIGELE 204 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK----ALNI 254 YP K G E + + E + ++ + ++ +M++ DLK LN+ Sbjct: 205 EIYPAASAKSKGDESFREEALEATHLLQQGRPGYMALWN--HIMRVSVTDLKKNYEKLNV 262 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 D++ E D P+ +++ + +GY Y MD+ L+ Sbjct: 263 TFDLWKKESDAQPYIPA----MVEEMREKGYAY----------------MDQGALVVDVK 302 Query: 315 MVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSGYVKRLEA 369 D + P +LKSDG+ Y DLA + E+ F D ++YV+ KR E Sbjct: 303 EETDTKEVPPCMILKSDGASLYTTTDLATI-VEREKLFHPDEILYVVD-------KRQEM 354 Query: 370 VAAAVSEKKAQINVLLCELVRLY---------RDGMPIKMSKRAGDFITLRHVVDEVGSD 420 V + A+ LL + +L +DG P K R G + L H+++++ + Sbjct: 355 HFVQVF-RCAKKTGLLPQETKLSFLGFGTMNGKDGKPFKT--REGGVMRLEHLIEDINEE 411 Query: 421 SVRFMML--------WRKNSELLDFDFCK---VKEQSKENPVF--------------YVQ 455 ++ R+ ++++ K + Q+ ++ +F Y+ Sbjct: 412 MFHKIVENRSVKDKDARQTAQIVGLSAIKYGDLSNQATKDYIFDIDRFTSFEGNTGPYIL 471 Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515 Y R +SI + + + D ++ +E SE L++ L +P V+E A Sbjct: 472 YTIVRIKSILNR----YEQENKDTENGEILEAANE---SEKVLMLALTGFPAVVEGAFEE 524 Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575 + P+K+ Y+Y+LA+ F+ + + + + + +Q++ ++ + ++ Sbjct: 525 KAPHKVCSYIYELANAFNRFYH------ETKILSEEDERQKASWIQVLLLTRKVLETSID 578 Query: 576 IIGVESPNEM 585 ++G +P M Sbjct: 579 LLGFSAPERM 588 >gi|190149308|ref|YP_001967833.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303250518|ref|ZP_07336715.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303251862|ref|ZP_07338033.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307244840|ref|ZP_07526939.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307247015|ref|ZP_07529069.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307249238|ref|ZP_07531235.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307251560|ref|ZP_07533467.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307253794|ref|ZP_07535648.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307256060|ref|ZP_07537848.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307258250|ref|ZP_07539993.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307260491|ref|ZP_07542185.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307262621|ref|ZP_07544251.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189914439|gb|ACE60691.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302649292|gb|EFL79477.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650506|gb|EFL80665.1| arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306854285|gb|EFM86491.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306856467|gb|EFM88616.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306858762|gb|EFM90821.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306861024|gb|EFM93030.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306863278|gb|EFM95218.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865482|gb|EFM97377.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306867710|gb|EFM99555.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306869803|gb|EFN01586.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306872044|gb|EFN03758.1| Arginyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 575 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 137/582 (23%), Positives = 238/582 (40%), Gaps = 82/582 (14%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AM ++ LG++P A+ I+ ++ D + IAG GFIN++L+ ++L Sbjct: 37 GDYQANGAMGAAKKLGMNPREFAQKILDNADLNGIADKLEIAGPGFINIFLNQAWLAN-Q 95 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 +S + + +G T V I++ S N MHVGH R ++GD + + F G +V Sbjct: 96 ASEALQAVNFGIKTANPQTIV-IDYSSPNVAKEMHVGHLRSTIIGDAVVRTLEFLGNKVI 154 Query: 163 REYYINDAGAQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221 R ++ D G Q L A + A SDL E +Y KE D S E+ Sbjct: 155 RANHVGDWGTQFGMLIAYLEKMENEHASQMELSDL-EAFY------RAAKEHYD--SDEV 205 Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS-PIRDIIDNL 280 F E+ +VK S + + L + + H+ ++++ R + + +D++ Sbjct: 206 --FAEKARNYVVKLQSGDEYCRTMWKKLVDITMHHN----QENYDRLNVTLSEKDVMGE- 258 Query: 281 ARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYF 334 +Y +LP + K + D ++F GD + + K DG + Y Sbjct: 259 ----SLYNPMLPEIVADLKAKGLAVEDDGALVVFLEEFKNKDGDPMGVIVQKKDGGFLYT 314 Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVR 390 D+A K +YE D ++ S + ++++ + A V E + + + Sbjct: 315 TTDIAAAKYRYETLNADRVLVFSDSRQAQHMQQAWLITRKAGYVPESFSLEHPFFGMM-- 372 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVR 423 L +DG P K R+G + L+ ++DE V SV+ Sbjct: 373 LGKDGKPFKT--RSGGTVKLKDLLDEAVERADKLISERSTDLTAEEKAAVVEAVAIGSVK 430 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + L + + FD+ + + N Y+QYAY R RSIF +A +D + Sbjct: 431 YSDLSKNRTTDYVFDWDNML-TFEGNTAPYMQYAYTRIRSIFNRA-----GIDVNGLNGE 484 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + E + E L V L ++ + P L YLY+LA F + P Sbjct: 485 INLTEDK----ERALAVKLLQFEEALNGVAKDGMPNILCQYLYELAGAFSSFY---EACP 537 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L + RL L A + GL+++G+++ +M Sbjct: 538 MLNA----EENVKNSRLSLAALTAKTLKQGLDLLGIKTIEKM 575 >gi|229819128|ref|YP_002880654.1| arginyl-tRNA synthetase [Beutenbergia cavernae DSM 12333] gi|229565041|gb|ACQ78892.1| arginyl-tRNA synthetase [Beutenbergia cavernae DSM 12333] Length = 593 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 144/594 (24%), Positives = 236/594 (39%), Gaps = 104/594 (17%) Query: 45 LSTNAAMILSRPLGLDPLTIAELIVARIKID---PDVDS-VFIAGKGFINLYLSPSYLRK 100 + NAA+ L++ +G P +A +VA + D DV + V ++G GF+N+ L ++ Sbjct: 51 VQVNAALALAKQVGAPPRDVATRLVAALDADGAFADVAAKVEVSGPGFLNITLRDDWIAA 110 Query: 101 ILSSIVVSGIEYGRNLIGKGTK----VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 + G + G G T V I++ + N MHVGH R VVGD LA + Sbjct: 111 QV------GAQAGDPRRGLPTPEPQVVPIDYSAPNVAKEMHVGHLRTTVVGDALARTLEA 164 Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL-------PEGYYPGVYLKHV 209 G+ V R+ +I D G L + DSD P +Y K Sbjct: 165 LGHRVVRQNHIGDWGTPFGMLIEHLLE------VGEDSDAARLLETDPNTFYQAARAKFD 218 Query: 210 GKE--LADKYSSEL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 +E A + + + L +E L I + M+++ + + D+ + ++ Sbjct: 219 AEEGDFATRSRARVVALQGGDEATLAIWRR-----MIELSKHYFNRIYTTLDVTLRDEHL 273 Query: 266 HRG---DPSPIRDIIDNLARQGY--VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-DD 319 DP + I D L +G V +G L C +F G D Sbjct: 274 AGESTYDPM-LEGICDELEAKGLAVVSQGAL----------C-------VFPPGFTGRDG 315 Query: 320 VDRPLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY------VKRLEAV 370 PL+ KSDG Y Y DLA K + + D ++YV+G+ + V RL Sbjct: 316 TPLPLIIRKSDGGYGYATTDLATIKHRAQDLHADRILYVVGAPQHLHLSMIFEVARLAGW 375 Query: 371 AAAVSEKKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFITLRH--------- 412 QI +L ++ R G PI++ +RAG + Sbjct: 376 LGDTEPVHVQIGNVLGADGKILKTRSGAPIRLMALLEEAVERAGAVVDAARGDLDDDERS 435 Query: 413 -VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 + +VG +V++ L + FDF ++ + N Y+QYA AR SIFR+A Sbjct: 436 AIARQVGIGAVKYADLSVAHDTEYVFDFDRMLALNG-NTGPYLQYAAARIYSIFRKAG-- 492 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 L P + + +E L + L ++ V+ + P++L YL++LA Sbjct: 493 -------LDPADARGAVVLGEPAERALGLALLDFGAVVGDVAALLAPHRLCTYLFELAQA 545 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + + A +L RL L AV + GL+++G+ +P M Sbjct: 546 FTAFYDA------CPVLTAPTDELRASRLALTAAVLGTLVEGLDLLGIAAPERM 593 >gi|148379062|ref|YP_001253603.1| arginyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502] gi|153932090|ref|YP_001383444.1| arginyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397] gi|153934799|ref|YP_001386991.1| arginyl-tRNA synthetase [Clostridium botulinum A str. Hall] gi|166232777|sp|A7FSW7|SYR_CLOB1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|166232778|sp|A5I0R5|SYR_CLOBH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|148288546|emb|CAL82626.1| arginyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502] gi|152928134|gb|ABS33634.1| arginyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397] gi|152930713|gb|ABS36212.1| arginine--tRNA ligase [Clostridium botulinum A str. Hall] Length = 563 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 133/576 (23%), Positives = 247/576 (42%), Gaps = 99/576 (17%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIE 111 L++ P IAE + +I + + V G ++N ++ + L K +L ++ + Sbjct: 44 LAKTFRKAPNLIAEELKEKINKEG-FEKVVTVGP-YLNFFVDKTILIKDVLEKVLSEKEK 101 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG + +G+G V +E+ S N P H+GH +G+ L +++F GY ++ D G Sbjct: 102 YGSSKVGEGKNVVVEYSSPNIAKPFHIGHLFTTAIGNALYKILSFEGYNCIGINHLGDWG 161 Query: 172 AQINTLALSVF--WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY--SSELLNFPEE 227 Q L +S + W ++AL + G +Y+K G+ D LNF Sbjct: 162 TQFGKL-ISAYRRWVDEEALEKD----AIGELLRIYVKFHGEAEKDPELEKEARLNF--- 213 Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287 K L + + + LK N +D+ + D G+ S D +D + ++ Sbjct: 214 KRLEEGSEEETELWNRFKDLSLKEFNKVYDMLGIKFDSLAGE-SFYSDKMDAVVQE---- 268 Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRP---LLKSDGSYTYFAADLA- 339 +D K LL S ++ D+ + P + KSDG+ Y DLA Sbjct: 269 ----------------IDDKGLLVDSNGAKVVMLDEYNMPPCMIKKSDGATIYATRDLAA 312 Query: 340 --YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGM 396 Y K Y+ F IYV+G+ + + K++ + A + LV+L Sbjct: 313 AIYRKKTYD--FHKCIYVVGTPQALHFKQVFTTLKLMGHDWADDCKHVGFGLVKLANK-- 368 Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD------------FCKVKE 444 K+S R GD + L ++++ ++++ ++ KN L + F +K Sbjct: 369 --KLSTRNGDVVFLEDLLNQSVEETLK--IINEKNPNLKNKGDVAKKLGIGAVVFTYLKN 424 Query: 445 QSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490 + + VF YV+Y+YAR +SI R+A ++ + D+ + + + E Sbjct: 425 NRERDIVFDWKEILSFDGETGPYVEYSYARGKSILRKAGELTGEADY-----SKLSSKEE 479 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-SHGRENPRLRFVQ 549 F+ ++L L + I NA EP + Y+ ++A F+ + +HG + Sbjct: 480 FELAKL-----LGGFNDAIMNAIDKLEPAMVTRYVIEVAKAFNKFYNAHG-------ILN 527 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A + + + R++LV A +I + LN++G++ EM Sbjct: 528 AEDNDVKLARVKLVEATCQVIKNALNLLGIDVVEEM 563 >gi|303239264|ref|ZP_07325793.1| arginyl-tRNA synthetase [Acetivibrio cellulolyticus CD2] gi|302593309|gb|EFL63028.1| arginyl-tRNA synthetase [Acetivibrio cellulolyticus CD2] Length = 565 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 126/583 (21%), Positives = 245/583 (42%), Gaps = 112/583 (19%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIE 111 LS+ L P IA + +I ++ + + G G++N Y ++ +L I G Sbjct: 45 LSKTLRKAPHIIAGELADKITKPECIEKICVIG-GYLNFYAEKVNFTTIVLKKIQEQGEN 103 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 +G + +GKG + +++ + N P H+GH V+G++L + F GY ++ D G Sbjct: 104 FGSSDVGKGKNIVLDYCATNIAKPFHIGHLPTTVIGNSLYKIFKFLGYNCVGINHLGDWG 163 Query: 172 AQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLK-----HVGKELADKYSSELLN 223 Q L ++ Y++ + N++++ P +Y+K + K L D+ + Sbjct: 164 TQFGKLIVA----YKK--WGNNAEIEKNPIKELVKIYVKFHKEAKIDKSLDDEGRAAFKA 217 Query: 224 FPEE--------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275 + KW +D S+ +I L L I D + E F+ + Sbjct: 218 IEDGKDEYVKLWKWF---RDISISEFKRI----LGVLKIDFDSWNGESFFN----DKMEP 266 Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYT 332 +I+ L +G + E S+ D+ + + P +L+SDG+ Sbjct: 267 VINELKEKGLLQE-------SQGAHIVDL-------------SEFNMPPCIILRSDGATL 306 Query: 333 YFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 Y DL A F K F ++Y + + + + ++L V + A+ LV + Sbjct: 307 YATRDLAAIFYRKETYDFHKILYCVATQQNLHFQQLFKVIEKMGYPWAE------NLVHV 360 Query: 392 YRDGMPIK---MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD------------ 436 + ++ M R G + L V+ E S ++ ++ KN EL Sbjct: 361 ANGMISLESSSMGTRQGTAVFLDDVLSEAVSKAL--AIIEEKNPELEGKEEVSRMVGIGA 418 Query: 437 FDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 F +K + ++ VF Y+QY YAR S+ ++ ++ DL + Sbjct: 419 IKFSALKNKRIKDSVFAWEKVLNFEGETSCYIQYTYARICSVIKKVEN-SEDLGINY--- 474 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 +++ + +D +L LA++P ++E+A+ EP ++ YL DL ++ + N Sbjct: 475 SLLAEGDSYDVVKL-----LAKFPDIVESASNEYEPSIISKYLIDLVQSYNKFYHF---N 526 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P L ++ +L R+ L AV ++ +G++++G+E P M Sbjct: 527 PIL----SSEDELKYSRIALCKAVKIVVKNGMSLLGIECPERM 565 >gi|302683480|ref|XP_003031421.1| hypothetical protein SCHCODRAFT_68587 [Schizophyllum commune H4-8] gi|300105113|gb|EFI96518.1| hypothetical protein SCHCODRAFT_68587 [Schizophyllum commune H4-8] Length = 599 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 115/526 (21%), Positives = 209/526 (39%), Gaps = 93/526 (17%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYL-SPSYLRKILSSIV-------VSGIEY 112 P I ++ + K D + +V + K F++ L + + +R +L + EY Sbjct: 74 PNEIGAKVIEKFKPDEFIAAV-VQDKAFLHFRLNTENMIRSVLEQVTDLTHNTPSKEPEY 132 Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172 GRN +GKG ++ IE+ S N HVGH R ++G LA+L G++V Y+ D G Sbjct: 133 GRNELGKGKRLVIEYSSPNIAKSFHVGHLRSTIIGAFLANLYKAHGWDVVSLNYLGDWGT 192 Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232 Q +A+ Y + +L + ++ +V K D + + KW Sbjct: 193 QFGLIAVGF------EKYGSQEELEKDAIKHLFDIYV-KINKDAEADPEVKAEAAKWFKR 245 Query: 233 VKDYSVQAM----------MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282 ++D +A+ +K ++ LN+ D++ E + + D ++ L + Sbjct: 246 MEDGDEEALKNWRVWRELSVKKYAEEYSRLNVHFDVYTGESKVSK---KSMDDALERLEK 302 Query: 283 QGYV--YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340 G + +EG K + + +G V R K DG+ Y D+ Sbjct: 303 MGLIDDHEGA----------------KLVNLEAYKMGKAVVR---KKDGTSIYLTRDIGG 343 Query: 341 FKCKYER-GFDNMIYVMGSDH----SGYVKRLEAVAAAVSEKKAQIN------------- 382 +YE+ FD MIYV+ S + + K L+ + ++ IN Sbjct: 344 AVERYEQYKFDRMIYVVSSQQDLHLAQFFKVLDLLEYPWAKNLVHINYGLVQGMSTRKGT 403 Query: 383 -VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD---EVGSDSVRFMMLWRKNSELLDFD 438 V L +++R M +M K + + + +G V+ + K F+ Sbjct: 404 VVFLDQIIREAASVMHEQMQKNEEKYKAIEDPEETSLNIGITGVKIQDMQAKRINNYTFN 463 Query: 439 FCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL- 496 + ++K + P Y+QYA+ R SI R+ + P +P S+ D + L Sbjct: 464 WDRMKSFEGDTGP--YLQYAHVRLASIARKNPHLLP-----------LPAPSQIDIATLV 510 Query: 497 ------QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 +++ L YP V++ A EP + +L+ L V W Sbjct: 511 QSNHAREIVFLLGSYPDVVKTAMRTHEPSAIVTFLFRLCHVISSAW 556 >gi|255745182|ref|ZP_05419131.1| arginyl-tRNA synthetase [Vibrio cholera CIRS 101] gi|262155960|ref|ZP_06029081.1| arginyl-tRNA synthetase [Vibrio cholerae INDRE 91/1] gi|255737012|gb|EET92408.1| arginyl-tRNA synthetase [Vibrio cholera CIRS 101] gi|262030271|gb|EEY48914.1| arginyl-tRNA synthetase [Vibrio cholerae INDRE 91/1] Length = 592 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 133/620 (21%), Positives = 234/620 (37%), Gaps = 136/620 (21%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ LG +P A+ ++ + ++ IAG GFIN++ Sbjct: 42 LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLEGIASKTEIAGPGFINIF 101 Query: 93 LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 LS +L + + G+ E + ++ ++ + N MHVGH R ++G Sbjct: 102 LSEEFLAAQAEAALADARLGVAQEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIG 154 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188 D + + F G++V R +I D G Q L L F+R + Sbjct: 155 DAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKK 214 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245 LY+ D E A Y +L F E W +V +Q Sbjct: 215 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ------ 254 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---C 302 ++ ++ R + S R+ + + +Y +LP S K Sbjct: 255 ---------------NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAV 295 Query: 303 DMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358 + D Q++F G+ + + K DG + Y D+A K +YE G D ++Y + S Sbjct: 296 EDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDS 355 Query: 359 DHSGYVKRLEAVAAAVSEKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHV 413 ++ + A + K I NV L + L +DG P K RAG + L + Sbjct: 356 RQHQHLMQ----AWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFKT--RAGGTVRLADL 409 Query: 414 VDEVGSDSVRFMMLWRKNSEL-----------LDFDFCKVKEQSKE-------------- 448 +DE + ++ KN EL + K + SK Sbjct: 410 LDEAQERAK--ALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLA 467 Query: 449 ---NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 N Y+QYAY R S+F +A +D + ++ E + E LI L ++ Sbjct: 468 FEGNTAPYMQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQF 518 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 +++ +P+ + YL++LA +F + + A + RL+L Sbjct: 519 EEAVQSVAREGQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESIKQSRLKLAAL 572 Query: 566 VASIINSGLNIIGVESPNEM 585 A I GL ++G+++ M Sbjct: 573 TAKTIKQGLALLGIDTLERM 592 >gi|308800206|ref|XP_003074884.1| Args arginyl-tRNA synthetase (IC) [Ostreococcus tauri] gi|116061434|emb|CAL52152.1| Args arginyl-tRNA synthetase (IC) [Ostreococcus tauri] Length = 603 Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 127/513 (24%), Positives = 207/513 (40%), Gaps = 57/513 (11%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A +IV I DS+ IAG GFIN LS + IL+ + G G+ Sbjct: 118 NPREVAAVIVDGISDTTTFDSITIAGAGFINFKLSDHF---ILTRLRELGKTVKPTSSGE 174 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 V ++F S N MHVGH R ++GD L ++ F G + R ++ D G Q L + Sbjct: 175 SGSVLVDFSSPNIAKEMHVGHLRSTIIGDALCNVFEFCGLKTIRLNHVGDWGTQFGML-I 233 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 + + + SDL E Y K + E + ++ K S Q Sbjct: 234 QFMTDNKVSPDSAVSDLQECY---------------KRAKERFDQDDD-----FKSQSKQ 273 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI--IDNLARQGYVYEGILPPPKSK 297 A++K+ D AL I D R + I D I + R Y ++P + Sbjct: 274 AVIKLQSYDADALRTWKQIC----DASRAEFQTIYDRLNISIIERGESYYNDMIPAVLDE 329 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCK-YERGFDNMIY 354 K ++ + D + P++ KSDG + Y + DLA + + E D +IY Sbjct: 330 LVAK-NVVVEDAGALCIFDDDHAEAPVICRKSDGGFNYASTDLAAIRHRALEEKVDRIIY 388 Query: 355 VMGSDHSGYVKRLEAVAAA------VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 V + + + A A S + ++ LL E + K + + + + Sbjct: 389 VTDQGQQKHFRAIFKTAHAAGWGHGASGETVKLKSLLDEAEERCLQFLKEKGTDLSAEEL 448 Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 + + +G SV++ L F F ++ + K N Y+QY++AR +I R+A Sbjct: 449 STASRI--LGVSSVKYADLHNNRLTAYTFSFDRMLDL-KGNTAMYLQYSHARVATILRKA 505 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 P LD P + + E + +E L VHL + V+ P K+ YLY L Sbjct: 506 ----PTLD---LPLDGLHFE---NAAERLLAVHLIKLDDVLAATMKELAPSKICDYLYTL 555 Query: 529 ASVFHGHWSH----GRENPRLRFVQANNRKLTM 557 ++F+ ++ G EN R TM Sbjct: 556 CTMFNNFYAECKVIGGENEASRLFLCMRTAATM 588 >gi|15642074|ref|NP_231706.1| arginyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121586898|ref|ZP_01676678.1| arginyl-tRNA synthetase [Vibrio cholerae 2740-80] gi|121727379|ref|ZP_01680518.1| arginyl-tRNA synthetase [Vibrio cholerae V52] gi|153818393|ref|ZP_01971060.1| arginyl-tRNA synthetase [Vibrio cholerae NCTC 8457] gi|153821699|ref|ZP_01974366.1| arginyl-tRNA synthetase [Vibrio cholerae B33] gi|227082200|ref|YP_002810751.1| arginyl-tRNA synthetase [Vibrio cholerae M66-2] gi|229507837|ref|ZP_04397342.1| arginyl-tRNA synthetase [Vibrio cholerae BX 330286] gi|229511927|ref|ZP_04401406.1| arginyl-tRNA synthetase [Vibrio cholerae B33] gi|229519063|ref|ZP_04408506.1| arginyl-tRNA synthetase [Vibrio cholerae RC9] gi|229607382|ref|YP_002878030.1| arginyl-tRNA synthetase [Vibrio cholerae MJ-1236] gi|254849161|ref|ZP_05238511.1| arginyl-tRNA synthetase [Vibrio cholerae MO10] gi|298497899|ref|ZP_07007706.1| arginyl-tRNA synthetase [Vibrio cholerae MAK 757] gi|9656621|gb|AAF95220.1| arginyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548834|gb|EAX58877.1| arginyl-tRNA synthetase [Vibrio cholerae 2740-80] gi|121630271|gb|EAX62669.1| arginyl-tRNA synthetase [Vibrio cholerae V52] gi|126511083|gb|EAZ73677.1| arginyl-tRNA synthetase [Vibrio cholerae NCTC 8457] gi|126520797|gb|EAZ78020.1| arginyl-tRNA synthetase [Vibrio cholerae B33] gi|227010088|gb|ACP06300.1| arginyl-tRNA synthetase [Vibrio cholerae M66-2] gi|229343752|gb|EEO08727.1| arginyl-tRNA synthetase [Vibrio cholerae RC9] gi|229351892|gb|EEO16833.1| arginyl-tRNA synthetase [Vibrio cholerae B33] gi|229355342|gb|EEO20263.1| arginyl-tRNA synthetase [Vibrio cholerae BX 330286] gi|229370037|gb|ACQ60460.1| arginyl-tRNA synthetase [Vibrio cholerae MJ-1236] gi|254844866|gb|EET23280.1| arginyl-tRNA synthetase [Vibrio cholerae MO10] gi|297542232|gb|EFH78282.1| arginyl-tRNA synthetase [Vibrio cholerae MAK 757] Length = 599 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 133/620 (21%), Positives = 234/620 (37%), Gaps = 136/620 (21%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ LG +P A+ ++ + ++ IAG GFIN++ Sbjct: 49 LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLEGIASKTEIAGPGFINIF 108 Query: 93 LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 LS +L + + G+ E + ++ ++ + N MHVGH R ++G Sbjct: 109 LSEEFLAAQAEAALADARLGVAQEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIG 161 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188 D + + F G++V R +I D G Q L L F+R + Sbjct: 162 DAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKK 221 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245 LY+ D E A Y +L F E W +V +Q Sbjct: 222 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ------ 261 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---C 302 ++ ++ R + S R+ + + +Y +LP S K Sbjct: 262 ---------------NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAV 302 Query: 303 DMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358 + D Q++F G+ + + K DG + Y D+A K +YE G D ++Y + S Sbjct: 303 EDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDS 362 Query: 359 DHSGYVKRLEAVAAAVSEKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHV 413 ++ + A + K I NV L + L +DG P K RAG + L + Sbjct: 363 RQHQHLMQ----AWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADL 416 Query: 414 VDEVGSDSVRFMMLWRKNSEL-----------LDFDFCKVKEQSKE-------------- 448 +DE + ++ KN EL + K + SK Sbjct: 417 LDEAQERAK--ALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLA 474 Query: 449 ---NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 N Y+QYAY R S+F +A +D + ++ E + E LI L ++ Sbjct: 475 FEGNTAPYMQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQF 525 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 +++ +P+ + YL++LA +F + + A + RL+L Sbjct: 526 EEAVQSVAREGQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESIKQSRLKLAAL 579 Query: 566 VASIINSGLNIIGVESPNEM 585 A I GL ++G+++ M Sbjct: 580 TAKTIKQGLALLGIDTLERM 599 >gi|311978065|ref|YP_003987185.1| arginyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus] gi|82000078|sp|Q5UQ59|SYR_MIMIV RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|55417274|gb|AAV50924.1| arginyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus] gi|308204982|gb|ADO18783.1| arginyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus] Length = 600 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 128/567 (22%), Positives = 237/567 (41%), Gaps = 118/567 (20%) Query: 68 IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127 ++ +I I ++ ++++ + INL ++ILS + Y N I K K+ +++ Sbjct: 103 VIKQIMITLNISKLYLSNR--INLLY-----KRILSGSSI----YVPNTITK--KIIVDY 149 Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187 S N MH+GH R ++G+++ ++ G++V R ++ D G Q Sbjct: 150 SSPNIAKEMHIGHLRSTIIGESICRVLEMCGHDVYRINHVGDWGTQF------------- 196 Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYS-SELLNFPEE--KWLPIVKDYSVQAMMKI 244 G+ + ++ + Y+ SEL+N +E K D+ Q+ ++ Sbjct: 197 ---------------GMLIAYIKNNQIESYTISELMNIYKESRKLFESSIDFKNQSRLET 241 Query: 245 I---RDDLKALNIQHDIF-ISEDDFHRGDPSPIRDI--IDNLARQGYVYEGILPPPKSKT 298 + +++++ I I IS + FH I + I+NL +G E ++ Sbjct: 242 VSLQNGNIESITIWQKIHKISMNSFH-----EIYSLLGINNLITKG---ESFYQDQMTEL 293 Query: 299 TQKCDMDRKQLLFRST--MVGDDVDRPLL--KSDGSYTYFAADLAYFKCK-YERGFDNMI 353 D K + M + + +P + KSDG +TY +DL K + + D++I Sbjct: 294 VNSLTSDNKITVENDMKLMFVEGISKPFILQKSDGGFTYDTSDLTALKYRLFIEKADHII 353 Query: 354 YVMGSDHSGYVKRLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412 YV+ S + ++ +A + K Q+ + LV L DG K+ R+G+ I L+ Sbjct: 354 YVVDSSQQEHFSQMFQIAEKLDWIKNQQLQHIGFGLV-LGSDGS--KLKTRSGETIKLQD 410 Query: 413 VVDEVGSDSVRFM--MLWRKNSELLDFDFCKVKEQ------------------------- 445 V+D V S + ++ +KN + D D + ++ Sbjct: 411 VIDNVVSHASNITRELIKQKNLDWNDDDILTISKKIAINCIKYSDLNNPRLNNYKFDINK 470 Query: 446 ---SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 SK N Y+ Y ARC+SI R+ + L+ D+ N + L++H+ Sbjct: 471 MLNSKGNTAVYLMYGLARCKSILRKVPN-NTVLNGDIIIEN---------ENSRNLLLHV 520 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR----ENPRLRFVQANNRKLTMM 558 +Y VI+ P+ L YLYDL ++ R +N L ANN Sbjct: 521 LKYVEVIDQTVETMCPHYLCIYLYDLIGSLTKFYTTNRCLEYDNDNLIGYNANN------ 574 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 L++V+ V II+ +IG+E ++ Sbjct: 575 -LRIVNMVKIIISKIFELIGLEEIEQL 600 >gi|256074367|ref|XP_002573497.1| arginyl-tRNA synthetase [Schistosoma mansoni] gi|238658677|emb|CAZ29729.1| arginyl-tRNA synthetase, putative [Schistosoma mansoni] Length = 629 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 134/597 (22%), Positives = 242/597 (40%), Gaps = 93/597 (15%) Query: 37 PRDCAHGHLSTNAAMILSRPLGLD--PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS 94 P + G N+A+ + + D P IA+ IVA + ++ ++ V + GFIN+++ Sbjct: 78 PTKRSFGDYQCNSALSIRKESNNDQNPFDIAKSIVAALPVNDLIEKVDVVPPGFINIWIK 137 Query: 95 PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154 ++ + I++ G+ I V ++ S N MHVGH R ++G++++ L+ Sbjct: 138 QRFISNEVRKILLHGVT--PPFIPHKYSVIVDMSSPNIAKEMHVGHLRSTIIGESISRLL 195 Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA 214 +F G++V + ++ D G Q L + + +Y + P P L+ K Sbjct: 196 SFLGHKVLKLNHLGDWGTQFGMLIAHL-----KEIYPDHKTAP----PISDLQAFYKTSK 246 Query: 215 DKYSSELLNFPEEKWLPIVK------DYSVQAMMKIIRDDLKAL-NIQHDIFISEDDFHR 267 +Y E +F + + +VK +Y V A +I K ++ H + I E+ R Sbjct: 247 TRYDEE-KDFNQRAHMAVVKLQQNDPEY-VHAWKQICDISRKEFDDVYHRLGI-ENLIER 303 Query: 268 GDP---SPIRDIIDNLARQGYVYEG----ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 G+ S + + +++L Q + E IL PPK +V Sbjct: 304 GESFYQSRMEEFVNDLKSQNVLQEDEGRLILWPPKC----------------------EV 341 Query: 321 DRPLLKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 ++KSDG +TY +DL A + +E D ++YV+ S ++ + A A + Sbjct: 342 PLTVVKSDGGFTYDTSDLTALLQRLHEEKADWVLYVVDMGQSVHLNTVFAGAEMLGYYNP 401 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439 ++ + + K R+GD + L ++DE + ++ +N EL + +F Sbjct: 402 NVHKVQHIGFGVVLGEDKKKFKTRSGDTVRLVDLLDEGLERAKNRLLEKERNKELTEAEF 461 Query: 440 CKVKE----------------------------QSKENPVFYVQYAYARCRSIFRQAKDI 471 + ++ K N Y+ YAY R RSI R A Sbjct: 462 ERAQKAVAYGCIKYADLSHSRTIDYVFSFDRMLDDKGNTAVYLLYAYTRIRSIIRNAG-- 519 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 + + + + V P E EL L L P ++ + L YLYDL+ Sbjct: 520 YSEKTINEISKTV-PLIFEHPM-ELTLAKALCRLPDILLKIQNDFLLHSLCDYLYDLSCD 577 Query: 532 FHGHWSHG---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + N VQ N R+ L A A ++ G +I+G+E+ +M Sbjct: 578 FTNFYDACYCIERNQETGDVQINKE-----RIVLCEATARVMKCGFDILGIETVEKM 629 >gi|169623233|ref|XP_001805024.1| hypothetical protein SNOG_14853 [Phaeosphaeria nodorum SN15] gi|111056585|gb|EAT77705.1| hypothetical protein SNOG_14853 [Phaeosphaeria nodorum SN15] Length = 749 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 136/563 (24%), Positives = 221/563 (39%), Gaps = 117/563 (20%) Query: 101 ILSSIVVSGIEYG--RNL---------IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 +L ++ SG EYG RNL GK K+ +EF S N P H GH R ++G Sbjct: 223 VLPMVLKSGAEYGFNRNLGLRNPEDPAQGK-KKMIVEFSSPNIAKPFHAGHLRSTIIGGF 281 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYL 206 LA+L +G++V R Y+ D G Q LA+ L+ N+ +L P G+ +Y+ Sbjct: 282 LANLYEGAGWDVVRMNYLGDWGKQYGVLAIGF------DLFGNEEELVKNPIGHLYDIYV 335 Query: 207 K-----HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 K H E +E EE KD S Q KI + + + ++ Q + Sbjct: 336 KVSTIQHEEAEQVKALKAEAAKLKEEG-----KDASEQEA-KITKIETEGIDEQARKYFK 389 Query: 262 EDDFHRGDPSPI------RDIIDNLARQGYVYEGILPPPKSKTTQKCD--MDRKQLLFRS 313 G+P + RD+ + Y I S +Q D M+ + Sbjct: 390 --GMVDGEPKALGIWKRFRDLSIEKYKATYARLNIRYDDYSGESQVKDESMELAAKIMWE 447 Query: 314 TMVGDDVDRPLL----------------KSDGSYTYFAADLAYFKCKYER-GFDNMIYVM 356 V +D + ++ K DG+ Y D+ + E+ FD+MIYV+ Sbjct: 448 KKVCEDSEGAVIVDLTKHSKKLGKAVVKKKDGTSLYLTRDIGEAIQRVEKYHFDHMIYVV 507 Query: 357 GSDHSGYVKRLEAVA-----AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 S ++ +L + +S + IN GM + MS R G L Sbjct: 508 ASQQDLHLAQLFKIEELMGRTDISSRCTHINF-----------GMVLGMSTRKGTAKFLD 556 Query: 412 HVVDEVG--------SDSVRF------------------MMLWRKNSELLDFDFCKVKEQ 445 ++ +VG S+ ++ M+ K + ++ F + Sbjct: 557 DILRDVGEKMHDVMRSNQAKYEQVENPDQVADTLGISAVMVQDMKGKRINNYTFDMDRMT 616 Query: 446 SKENPVF-YVQYAYARCRSIFRQAKDIFPDL---DFDLFPRNVIPQESEFDTSELQLIVH 501 S E Y+QYA+AR SI+R+A P L D N++ + D L+ Sbjct: 617 SFEGDTGPYLQYAHARLCSIYRKALAADPSLEKVDLASADLNLLTEPHAID-----LVRQ 671 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 LA +P N QEP + YL+ +A + H L+ V R + + RL Sbjct: 672 LASWPDTFLNTIKTQEPTTVLTYLFKMAHALSSSYDH------LQVVGTKERGVMLARLA 725 Query: 562 LVHAVASIINSGLNIIGVESPNE 584 L A ++++G+ ++G+ SP E Sbjct: 726 LYVAARQVLSNGMRVLGL-SPVE 747 >gi|260914195|ref|ZP_05920668.1| arginine-tRNA ligase [Pasteurella dagmatis ATCC 43325] gi|260631828|gb|EEX50006.1| arginine-tRNA ligase [Pasteurella dagmatis ATCC 43325] Length = 597 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 124/596 (20%), Positives = 227/596 (38%), Gaps = 88/596 (14%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ G +P AE ++ ++ ++ + + +AG GFIN++ Sbjct: 47 LVRQSSKAQFGDYQANGIMAAAKKAGYNPREFAEKVIQQLDLNGIAEKIELAGPGFINIF 106 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L +L + + + ++ + G + K T V ++ S N MHVGH R ++GD + Sbjct: 107 LDKHWLAENVQN-ALNDEKLGITVTEKQTVV-ADYSSPNVAKEMHVGHLRSTIIGDAVVR 164 Query: 153 LMAFSGYEVTREYYINDAGAQINTLA------------------LSVFWRYQQALYNNDS 194 + F G +V R ++ D G Q L L F+R + Y++D Sbjct: 165 TLEFLGNKVIRANHVGDWGTQFGMLIAYLEKMENENASEMELSDLEAFYRAAKEHYDSDP 224 Query: 195 DLPEGYYPGV--------YLKHVGKELAD-KYSSELLNFPEEKWLPIVKDYSVQA----M 241 + E V Y + + K+L D N+ KD ++ M Sbjct: 225 EFAEKARNYVVKLQGGDEYCRTMWKKLVDITMQQNQQNYNRLNVTLTEKDVMGESLYNPM 284 Query: 242 MKIIRDDLK----ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 + I +DLK A+ + + + D+F D + I+ G++Y Sbjct: 285 LPSIVEDLKKRHLAVEDEGALVVYLDEFKNKDGEAMGVIVQK-KDGGFLYTTTDIAAAKY 343 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 + + DR L+F T + + L Y ++ N ++G Sbjct: 344 RYETLNADRA-LVFSDTRQSQHMQQAWL--------ITRKAGYVPDNFQLEHKNFGMMLG 394 Query: 358 SD-------HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 D G VK + + AV IN + ++A Sbjct: 395 KDGKPFKTRTGGTVKLADLLDEAVERATQLIN----------EKSTALSEQEKAA----- 439 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 V++ V SV++ L + + FD+ + + N Y+QYAY R RSIF ++ Sbjct: 440 --VIEAVAIGSVKYADLSKNRTTDYIFDWDNML-SFEGNTAPYMQYAYTRIRSIFNRS-- 494 Query: 471 IFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 D+ + +F D E L V L ++ ++ P+ L YLY+LA Sbjct: 495 -------DISESQLQQATLKFADEKERVLAVKLLQFEEAVQVVAKEGSPHILCTYLYELA 547 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 VF + H + + + M RL+L + GL ++G+++ +M Sbjct: 548 GVFSSFYEH------CPILNNEDENVKMSRLKLALLTEKTLKQGLTLLGIKTVEKM 597 >gi|298373011|ref|ZP_06983001.1| arginine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058] gi|298275915|gb|EFI17466.1| arginine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058] Length = 593 Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 123/548 (22%), Positives = 235/548 (42%), Gaps = 80/548 (14%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 KGF+NL + Y ++L+ I S +YG K + IEF S N P+H+GH R Sbjct: 78 KGFLNLVVDRGYFVRLLNEID-SHRQYGFVKANEKSPLMMIEFSSPNTNKPLHLGHIRNN 136 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRYQQALYNN-DSDLPEGYY 201 ++GD+++ + SG+ V + +ND G I + LA +F + + D G Y Sbjct: 137 LLGDSISRIQEASGWRVVKTNIVNDRGIHICKSMLAWKMFGNGETPQSSGIKGDHLVGKY 196 Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD-DLKALNIQHDIFI 260 + + K++ + + + E+ PI+++ QAM+K + D + +++ ++ Sbjct: 197 YVRFNEEYRKQVEELTAQGVAKEEAERTAPIMRE--AQAMLKRWEEGDGEVIDLW---YM 251 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR---KQLLFR----- 312 + + G + R + G ++ I ++ K ++ R + + ++ Sbjct: 252 MNNWVYEGFDATYRSL-------GISFDKIYYESQTYIVGKKEVLRGLDEGVFYQKEDGS 304 Query: 313 --STMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLE 368 + + D +D + LL++DG+ Y D+ K +YE D M+YV+G++ + + + L Sbjct: 305 VWADLTADGLDEKLLLRADGTSVYMTQDIGTAKLRYEDYDIDKMVYVVGNEQNYHFQVLA 364 Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPI---KMSKRAGDFITLRHVVDEVGSDSVRFM 425 + + + Q ELV + + KM R G + ++DE+ ++ Sbjct: 365 ILLHRLGFRWGQ------ELVHFSYGMVELPEGKMKSREGTVVDADDLIDEMTDEAYNIT 418 Query: 426 MLWRKNSELL--------------DFDFCKVKEQSKENPVF--------------YVQYA 457 K +E+ + +K +N VF ++QY Sbjct: 419 KELGKIAEMTPDEARQTARIIGLGALKYFILKVAPVKNMVFDPRESIDFNGNSAPFIQYT 478 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 AR SI R+A D D + SE +I +L+ + V+ A+ Sbjct: 479 NARINSILRKAAD-------DGIVLETVCDTVSISDSEKYIIQYLSSFAEVLGEASRTFS 531 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 P +A Y YDLA F + + P LR A+ R L RL L ++ ++ + ++++ Sbjct: 532 PALIANYCYDLAKEFSRFY---HDCPILREENADVRNL---RLVLCRTISKVLVNAMSLL 585 Query: 578 GVESPNEM 585 G+E PN+M Sbjct: 586 GIELPNKM 593 >gi|237794368|ref|YP_002861920.1| arginyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657] gi|259511639|sp|C3KSZ0|SYR_CLOB6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|229261831|gb|ACQ52864.1| arginine--tRNA ligase [Clostridium botulinum Ba4 str. 657] Length = 563 Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 134/576 (23%), Positives = 249/576 (43%), Gaps = 99/576 (17%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIE 111 L++ P IAE + +I + + V G ++N ++ + L K +L ++ + Sbjct: 44 LAKTFRKAPNLIAEELKEKINKEG-FEKVVTVGP-YLNFFVDKTILIKDVLEKVLSEKEK 101 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG + +G+G V +E+ S N P H+GH +G+ L +++F GY ++ D G Sbjct: 102 YGSSKVGEGKNVVVEYSSPNIAKPFHIGHLFTTAIGNALYKILSFEGYNCIGINHLGDWG 161 Query: 172 AQINTLALSVF--WRYQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSEL-LNFPEE 227 Q L +S + W ++AL + G +Y+K H E + E LNF Sbjct: 162 TQFGKL-ISAYRRWVDEEALEKD----AIGELLRIYVKFHEEAEKDPELEKEARLNF--- 213 Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287 K L + + + LK N +D+ + D G+ S D +D + ++ Sbjct: 214 KRLEEGSEEETELWNRFKDLSLKEFNKVYDMLGIKFDSLAGE-SFYSDKMDAVVQE---- 268 Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRP---LLKSDGSYTYFAADLA- 339 +D K LL S ++ D+ + P + KSDG+ Y DLA Sbjct: 269 ----------------IDDKGLLVDSNGAKVVMLDEYNMPPCMIKKSDGATIYATRDLAA 312 Query: 340 --YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGM 396 Y K Y+ F IYV+G+ + + K++ + A + LV+L Sbjct: 313 AIYRKKTYD--FHKCIYVVGTPQALHFKQVFTTLKLMGHDWADDCKHVGFGLVKLANK-- 368 Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD------------FCKVKE 444 K+S R GD + L ++++ ++++ ++ KN L + + F +K Sbjct: 369 --KLSTRNGDVVFLEDLLNQSVEETLK--IINEKNPNLKNKEDVAKKLGIGAVVFTYLKN 424 Query: 445 QSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490 + + VF YV+Y+YAR +SI R+A ++ + D+ + + + E Sbjct: 425 NRERDIVFDWKEILSFDGETGPYVEYSYARGKSILRKAGELTGEADY-----SKLSSKEE 479 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-SHGRENPRLRFVQ 549 F+ ++L L + I NA EP + Y+ ++A F+ + +HG + Sbjct: 480 FELAKL-----LGGFNDAIMNAIDKLEPAIVTRYVIEVAKAFNKFYNAHG-------ILN 527 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A + + + R++LV A +I + LN++G++ EM Sbjct: 528 AEDNDVKLARVKLVEATCQVIKNALNLLGIDVVEEM 563 >gi|238919488|ref|YP_002933003.1| arginyl-tRNA synthetase [Edwardsiella ictaluri 93-146] gi|259511644|sp|C5B832|SYR_EDWI9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|238869057|gb|ACR68768.1| arginyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146] Length = 577 Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 135/591 (22%), Positives = 239/591 (40%), Gaps = 98/591 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ +GL P +AE +VA + +D V IAG GFIN++L ++L Sbjct: 37 GDYQANGIMSAAKKMGLPPRQLAEQVVANLALDGIASKVEIAGPGFINIFLDAAWLAAQA 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + + G + T V +++ + N MHVGH R ++GD + F G+ V Sbjct: 97 DAALAD-PRLGVARVEPQTIV-VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSE 220 R ++ D G Q L ++ + Q + D L E +Y A K+ E Sbjct: 155 RANHVGDWGTQFGML-IAYLEKVQGSSETGDMALADLEAFY----------REAKKHYDE 203 Query: 221 LLNFPEEKWLPIVK-----DYSVQAMMKIIRDDLKALNIQHD---IFISEDDFHRGDP-- 270 F E +VK +Y + K++ ++ +D + +++DD G+ Sbjct: 204 DAAFAERARGYVVKLQGGDEYCREMWRKLVDITMRQNQRNYDRLNVTLTDDDVM-GESLY 262 Query: 271 SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 +P + I+ +L +G E S+ ++ FR+ G+ + + K DG Sbjct: 263 NPMLPGIVADLKAKGLATE-------SEGATVVFLNE----FRNKE-GEPMGVIVQKKDG 310 Query: 330 SYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEAVAAAVSEKKAQI 381 Y Y D+A K +YE G + ++Y + S + V++ V +VS + Sbjct: 311 GYLYTTTDIACAKYRYETLGANRILYYIDSRQHQHLMQAWTIVRKAGYVPDSVSLEHHMF 370 Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------- 416 ++L +DG P K RAG I L ++DE Sbjct: 371 GMMLG------KDGKPFK--TRAGGTIKLADLLDEAIERAAKLIAAKNPELSGDELKALV 422 Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 VG +V++ L + + FD+ + + N Y+QYAY R SIF++A Sbjct: 423 EVVGIGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVASIFKRA-----G 476 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 +D + + E E L L ++ I + P+ + YLY++A +F Sbjct: 477 IDENTLQGAITLTEER----EKALATRLMQFEETILSVAREGTPHVMCAYLYEVAGLFSS 532 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + A + RL+L A + +GL+ +G+++ M Sbjct: 533 FYEA------CPILNAEEESVRASRLKLAALTARTLKTGLDTLGIKTVERM 577 >gi|153828893|ref|ZP_01981560.1| arginyl-tRNA synthetase [Vibrio cholerae 623-39] gi|148875599|gb|EDL73734.1| arginyl-tRNA synthetase [Vibrio cholerae 623-39] Length = 599 Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 133/617 (21%), Positives = 232/617 (37%), Gaps = 130/617 (21%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ LG +P A+ ++ + +D IAG GFIN++ Sbjct: 49 LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLDGIASKTEIAGPGFINIF 108 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 LS +L + + I G T V ++ + N MHVGH R ++GD + Sbjct: 109 LSEEFLAAQAEAALAD-IRLGVAQEAPKTIV-ADYSAPNVAKEMHVGHLRSTIIGDAVVR 166 Query: 153 LMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNND 193 + F G++V R +I D G Q L L F+R + LY+ D Sbjct: 167 TLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLYDED 226 Query: 194 SDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKIIRDDLK 250 E A Y +L F E W +V +Q Sbjct: 227 EQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ----------- 261 Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---CDMDRK 307 ++ ++ R + S R+ + + +Y +LP S K + D Sbjct: 262 ----------NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAVEDDGA 307 Query: 308 QLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY 363 Q++F G+ + + K DG + Y D+A K +YE G D ++Y + S + Sbjct: 308 QVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQHQH 367 Query: 364 -------VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 V++ + VS + ++L +DG P K RAG + L ++DE Sbjct: 368 LMQAWIIVRKAGYIPENVSLEHHAFGMMLG------KDGRPFK--TRAGGTVRLADLLDE 419 Query: 417 VGSDSVRFMMLWRKNSEL-----------LDFDFCKVKEQSKE----------------- 448 ++ ++ KN EL + K + SK Sbjct: 420 --AEERAKALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEG 477 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 N Y+QYAY R S+F +A +D + ++ E + E LI L ++ Sbjct: 478 NTAPYMQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQFEEA 528 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 +++ +P+ + YL++LA +F + + A + RL+L A Sbjct: 529 VQSVAREGQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESIKQSRLKLAALTAK 582 Query: 569 IINSGLNIIGVESPNEM 585 I GL ++G+++ M Sbjct: 583 TIKQGLALLGIDTLERM 599 >gi|297588542|ref|ZP_06947185.1| arginine--tRNA ligase [Finegoldia magna ATCC 53516] gi|297573915|gb|EFH92636.1| arginine--tRNA ligase [Finegoldia magna ATCC 53516] Length = 564 Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 144/618 (23%), Positives = 254/618 (41%), Gaps = 94/618 (15%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 +F +K + D + EK+I D +IE P + G + L++ P IA Sbjct: 3 NFKEEVKQIILGFDTGL-TEKEISD--LIEIPPNSDMGDYAF-PVFKLAKTFRKAPNLIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI--EYGRNLIGKGTKV 123 E + + + ++ + G ++N ++ S K++ S++ + ++G IG G V Sbjct: 59 EELAKKEFSNENIKKITNVGP-YVNFFVDNS---KLVESVLTEAVKDDFGSGHIGVGKNV 114 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +F S N P H+GH R V+G+ + ++M + G+ T YI D G Q + +S + Sbjct: 115 VFDFSSTNIAKPFHIGHLRSTVIGNAIRNIMKYQGFNTTGVNYIGDYGTQFG-MMISAYL 173 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV--KDYSVQAM 241 ++ N + E V + KE + Y E + W + KD + + Sbjct: 174 KWGDEDKINADPIKELLNLYVKYNKIAKE-DESYMDEARD-----WFDKLEKKDPTAVKL 227 Query: 242 MKIIRD-DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 R+ LK +D+ E D G+ + I D L Sbjct: 228 WSWFREISLKEFQRVYDLLGVEFDNFNGESFHSQFIGDALEA------------------ 269 Query: 301 KCDMDRKQLLFRS----TMVGDDVDRP---LLKSDGSYTYFAADLA---YFKCKYERGFD 350 +D+K LL S + DD + P + KS+GS TY D+A Y K Y+ F Sbjct: 270 ---IDKKNLLEESDGAMIINLDDENLPPVLIKKSNGSSTYLTRDIATAMYRKKTYD--FY 324 Query: 351 NMIYVMGSDHSGYVKRLEAVA----------------AAVSEKKAQIN------VLLCEL 388 +YV+ S + ++L AV VS K + + L ++ Sbjct: 325 KNVYVVASQQKLHFEQLRAVLKKMGFDWWNDCEHVSFGMVSMKDGSMKTREGKVIFLEDV 384 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 + D + +R + V +VG +V F L+ + FD+ +V E Sbjct: 385 LNRAIDKTKSIIEERNPNLENKEEVAKQVGVGAVIFQDLFNNRIKDYTFDWDQVLNFDGE 444 Query: 449 NPVFYVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 Y QY +AR SI + + ++ + FDL D +E+ ++ HL+++ Sbjct: 445 TGP-YTQYTFARSCSILDKGEFELKENSKFDLL----------VDDTEIDIVKHLSKFEE 493 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 V+ NAT EP L Y +LA +F+ ++ N + V+ +L RL L ++V Sbjct: 494 VLLNATEKYEPSFLTRYTVELAKLFNKFYA----NCPINTVE---DELKYQRLYLTYSVN 546 Query: 568 SIINSGLNIIGVESPNEM 585 + L+++G+E+P M Sbjct: 547 KCLKLSLSLLGIEAPVRM 564 >gi|329956612|ref|ZP_08297185.1| arginine--tRNA ligase [Bacteroides clarus YIT 12056] gi|328523984|gb|EGF51060.1| arginine--tRNA ligase [Bacteroides clarus YIT 12056] Length = 605 Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 142/627 (22%), Positives = 264/627 (42%), Gaps = 120/627 (19%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 ++ +++ + GHL+ L R P A+ I ++ + S F KGF+N Sbjct: 27 QVQLQKTKKEFEGHLTLVVFPFL-RMSKKGPEQTAQEIGEYLQANEPSVSAFNVIKGFLN 85 Query: 91 LYLSPSYLRKILSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 L ++ S ++L+ I ++YG + K V IE+ S N P+H+GH R ++G+ Sbjct: 86 LTIASSAWIELLNGIHAD-VQYGIAAVTDKSPLVMIEYSSPNTNKPLHLGHVRNNLLGNA 144 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE----------G 199 LA+++ +G V + +ND G I L+ W+ Y N + PE G Sbjct: 145 LANIILANGNRVVKTNIVNDRGIHICKSMLA--WQK----YGN-GETPESSGKKGDHLIG 197 Query: 200 YYPGVYLKHVG---KELADKYSSELLNFPEEKWL-----PIVKDYSVQAMMKIIRDD--L 249 Y + KH KEL K+ SE L+ E K P++K+ + + ++K +D + Sbjct: 198 DYYVAFDKHYKAEVKELMAKFQSEGLSEEEAKTRAEAESPLMKE-AREMLVKWEANDPEV 256 Query: 250 KAL--NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-EGILPPPKSKTTQKCDMDR 306 +AL + ++ D+ +R + D + + Y EG K K + + Sbjct: 257 RALWKKMNDWVYAGFDETYR----MMGVTFDKIYYESETYLEG-----KEKVMEGLE--- 304 Query: 307 KQLLFR-------STMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMG 357 K +R + + G+ +D + LL++DG+ Y D+ K ++ + D M+YV+G Sbjct: 305 KGFFYRKEDGSVWADLTGEGLDHKLLLRADGTSVYMTQDIGTAKLRFADFPIDKMVYVVG 364 Query: 358 SDHS--------------------------GYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 ++ + G V+ E + + L+ E++ Sbjct: 365 NEQNYHFQVLSILLDKLGFEWGKGLVHFSYGMVELPEGKMKSREGTVVDADDLMAEMINT 424 Query: 392 YRD-----GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML---WRKN-----SELLDFD 438 ++ G ++K D ++ VG ++++ +L RKN E +DF+ Sbjct: 425 AKETSGELGKLDGLTKEEAD-----NIARIVGLGALKYFILKVDARKNMTFNPKESIDFN 479 Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498 N ++QY YAR +S+ R+AK+ + L P E E L Sbjct: 480 ---------GNTGPFIQYTYARIQSVLRKAKEAGITVPAQL------PAGIELSEKEEGL 524 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 I +A++ V++ A P +A Y YDL ++ + ++ N + + Sbjct: 525 IQMVADFATVVKQAGEDYSPSLIANYTYDLVKEYNQFYHD------FSILREENEAVKIF 578 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 RL L VA ++ G+ ++G+E P+ M Sbjct: 579 RLALSENVAKVVRLGMGLLGIEVPDRM 605 >gi|322805401|emb|CBZ02965.1| arginyl-tRNA synthetase [Clostridium botulinum H04402 065] Length = 563 Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 134/576 (23%), Positives = 248/576 (43%), Gaps = 99/576 (17%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIE 111 L++ P IAE + +I + + V G ++N ++ + L K +L ++ + Sbjct: 44 LAKTFRKAPNLIAEELKEKINKEG-FEKVVTVGP-YLNFFVDKTILIKDVLEKVLSEKEK 101 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG + +G+G V +E+ S N P H+GH +G L +++F GY ++ D G Sbjct: 102 YGSSKVGEGKNVVVEYSSPNIAKPFHIGHLFTTAIGSALYKILSFEGYNCIGINHLGDWG 161 Query: 172 AQINTLALSVF--WRYQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSEL-LNFPEE 227 Q L +S + W ++AL + G +Y+K H E + E LNF Sbjct: 162 TQFGKL-ISAYRRWVDEEALEKD----AIGELLRIYVKFHEEAEKDPELEKEARLNF--- 213 Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287 K L + + + LK N +D+ + D G+ S D +D + ++ Sbjct: 214 KRLEEGSEEETELWNRFKDLSLKEFNKVYDMLGIKFDSLAGE-SFYSDKMDAVVQE---- 268 Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRST----MVGDDVDRP---LLKSDGSYTYFAADLA- 339 +D K LL S ++ D+ + P + KSDG+ Y DLA Sbjct: 269 ----------------IDDKGLLVDSNGAKVVMLDEYNMPPCMIKKSDGATIYATRDLAA 312 Query: 340 --YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGM 396 Y K Y+ F IYV+G+ + + K++ + A + LV+L Sbjct: 313 AIYRKKTYD--FHKCIYVVGTPQALHFKQVFTTLKLMGHDWADDCKHVGFGLVKLANK-- 368 Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD------------FCKVKE 444 K+S R GD + L ++++ ++++ ++ KN L + + F +K Sbjct: 369 --KLSTRNGDVVFLEDLLNQSVEETLK--IINEKNPNLKNKEDVAKKLGIGAVVFTYLKN 424 Query: 445 QSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490 + + VF YV+Y+YAR +SI R+A ++ + D+ + + + E Sbjct: 425 NRERDIVFDWKEILSFDGETGPYVEYSYARGKSILRKAGELTGEADY-----SKLSSKEE 479 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW-SHGRENPRLRFVQ 549 F+ ++L L + I NA EP + Y+ ++A F+ + +HG + Sbjct: 480 FELAKL-----LGGFNDAIMNAIDKLEPAMVTRYIIEVAKAFNKFYNAHG-------ILN 527 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A + + + R++LV A +I + LN++G++ EM Sbjct: 528 AEDNDVKLARVKLVEATCQVIKNALNLLGIDVVEEM 563 >gi|195569059|ref|XP_002102529.1| GD19955 [Drosophila simulans] gi|194198456|gb|EDX12032.1| GD19955 [Drosophila simulans] Length = 572 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 117/505 (23%), Positives = 197/505 (39%), Gaps = 93/505 (18%) Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +E+ S N P HVGH R ++G+ LA+L GY TR Y+ D G Q LAL V Sbjct: 117 VEYSSPNIAKPFHVGHLRSTIIGNVLANLHQHLGYRTTRLNYLGDWGTQFGLLALGV--- 173 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE--------------KWL 230 Q L +D ++ +Y +V A + E+ + K Sbjct: 174 --QMLNVSDKEMQLSPIETLYKSYVAANQAAEQRPEIAQQARDLFAALEGGTDRAMAKQW 231 Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290 + Y+V+ + K+ L + D + E + + I+D++D L G+ Sbjct: 232 QQYRKYTVEDLSKVY----NRLGVYFDSYEWESQYSQ---QQIQDVLDKLRS-----AGL 279 Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GF 349 L P R +V D P++KSDGS Y A D+A + R F Sbjct: 280 LQPEHDG--------------REIVVVDGRRIPVIKSDGSTLYLARDIAALVERLSRFQF 325 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 ++YV+ + + + L AA+ ++ L E ++ + G MS R G I Sbjct: 326 SRLLYVVDNGQADHFNALFKTTAALDDR------LSLEQLQHVKFGRIHGMSTRQGKAIF 379 Query: 410 LRHVVDE---VGSDSVRFMMLWRKNSELLDFDFCKV-----------KEQSKENPVFYVQ 455 L+ V+DE + + R+N L D C + K++ + + F Q Sbjct: 380 LKDVLDEARDIMREKRNLSATTRENYSLDDEHVCDILGVSAVLINVLKQRRQRDHEFSWQ 439 Query: 456 YA------------YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS---ELQLIV 500 A Y CR D F D++ D ++ P F T L L+ Sbjct: 440 QALQVNGDTGIKLQYTHCR--LHSLLDNFRDVNLD----DIKPDWKHFATEPADALDLLY 493 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 LA + + + + E L YL+ L + + R RL Q ++++ + RL Sbjct: 494 ALARFDQSVWQSKEQLEACVLVNYLFGLCN------ATSRALKRLPVKQESSQEKQLQRL 547 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 L +A + G+ ++G+ ++M Sbjct: 548 LLFNAAKKTLRQGMELLGLRPLDQM 572 >gi|212692316|ref|ZP_03300444.1| hypothetical protein BACDOR_01812 [Bacteroides dorei DSM 17855] gi|237711416|ref|ZP_04541897.1| arginyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA] gi|237726123|ref|ZP_04556604.1| arginyl-tRNA synthetase [Bacteroides sp. D4] gi|265752822|ref|ZP_06088391.1| arginyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA] gi|212665193|gb|EEB25765.1| hypothetical protein BACDOR_01812 [Bacteroides dorei DSM 17855] gi|229435931|gb|EEO46008.1| arginyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4] gi|229454111|gb|EEO59832.1| arginyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA] gi|263236008|gb|EEZ21503.1| arginyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA] Length = 606 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 133/587 (22%), Positives = 234/587 (39%), Gaps = 129/587 (21%) Query: 76 PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK----VNIEFVSAN 131 P++ S + A KGF+NL ++ ++L+SI + EYG I K T+ V IE+ S N Sbjct: 72 PELVSAYNAVKGFLNLTIASDCWIELLNSIQAAP-EYG---IEKATENSPLVMIEYSSPN 127 Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 P+H+GH R ++G+ LA++MA +G +V + +ND G I L+ W L Sbjct: 128 TNKPLHLGHVRNNLLGNALANVMAANGNKVVKTNIVNDRGIHICKSMLA--W-----LKY 180 Query: 192 NDSDLPE----------GYYPGVYLKHVG---KELADKYSSELLNFPE------------ 226 + + PE G Y + KH KEL +Y +E LN E Sbjct: 181 GNGETPESSGKKGDHLIGDYYVAFDKHYKAEVKELTAQYQAEGLNEEEAKAKAEANSPLM 240 Query: 227 -------EKWLPIVKDYSVQAMMKIIRD--------DLKALNIQHD-IFISEDDFHRGDP 270 KW D ++A+ + + D K + + D I+ + + G Sbjct: 241 LEAREMLRKWE--ANDPEIRALWRKMNDWVYAGFDETYKMMGVSFDKIYYESNTYLEGKE 298 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + + +G+ Y K + D+ T G D + LL+ DG+ Sbjct: 299 KVMEGL-----EKGFFYR------KEDNSVWADL---------TAEGLD-HKLLLRGDGT 337 Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 Y D+ K +++ + MIYV+G++ + + + L + + + + V + Sbjct: 338 SVYMTQDIGTAKLRFQDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEWGKGLVHFSYGM 397 Query: 390 RLYRDGMPIKMSKRAGDFI----TLRHVVDEVGSDSVRFMMLWRKNSELLD--------- 436 +G KM R G + + +++ S L E D Sbjct: 398 VELPEG---KMKSREGTVVDADDLMEAMIETAKETSAELGKLDGLTQEEADNIARIVGLG 454 Query: 437 -FDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKD---IFPDLDFD 478 + +K +++N F ++QY YAR +S+ R+A + + P+ Sbjct: 455 ALKYFILKVDARKNMTFNPKESIDFNGNTGPFIQYTYARVQSVLRKAAEAGIVIPE---- 510 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 +IP E E LI LA++ V++ A P +A Y YDL ++ + Sbjct: 511 -----IIPAGLELSAKEEGLIQMLADFKSVVKQAGSDYNPSIIANYAYDLVKEYNQFYHD 565 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ N L + RL L V I+ + + ++G+E P M Sbjct: 566 ------FSILREENEALKVFRLALSANVGKIVKTAMGLLGIEVPERM 606 >gi|31077163|sp|Q9KQC6|SYR_VIBCH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS Length = 577 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 133/620 (21%), Positives = 234/620 (37%), Gaps = 136/620 (21%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ LG +P A+ ++ + ++ IAG GFIN++ Sbjct: 27 LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLEGIASKTEIAGPGFINIF 86 Query: 93 LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 LS +L + + G+ E + ++ ++ + N MHVGH R ++G Sbjct: 87 LSEEFLAAQAEAALADARLGVAQEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIG 139 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188 D + + F G++V R +I D G Q L L F+R + Sbjct: 140 DAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKK 199 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245 LY+ D E A Y +L F E W +V +Q Sbjct: 200 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ------ 239 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---C 302 ++ ++ R + S R+ + + +Y +LP S K Sbjct: 240 ---------------NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAV 280 Query: 303 DMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGS 358 + D Q++F G+ + + K DG + Y D+A K +YE G D ++Y + S Sbjct: 281 EDDGAQVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDS 340 Query: 359 DHSGYVKRLEAVAAAVSEKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHV 413 ++ + A + K I NV L + L +DG P K RAG + L + Sbjct: 341 RQHQHLMQ----AWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFKT--RAGGTVRLADL 394 Query: 414 VDEVGSDSVRFMMLWRKNSEL-----------LDFDFCKVKEQSKE-------------- 448 +DE + ++ KN EL + K + SK Sbjct: 395 LDEAQERAK--ALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLA 452 Query: 449 ---NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 N Y+QYAY R S+F +A +D + ++ E + E LI L ++ Sbjct: 453 FEGNTAPYMQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQF 503 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 +++ +P+ + YL++LA +F + + A + RL+L Sbjct: 504 EEAVQSVAREGQPHIMCSYLFELAGIFSSFYE------ACPILVAEQESIKQSRLKLAAL 557 Query: 566 VASIINSGLNIIGVESPNEM 585 A I GL ++G+++ M Sbjct: 558 TAKTIKQGLALLGIDTLERM 577 >gi|152999024|ref|YP_001364705.1| arginyl-tRNA synthetase [Shewanella baltica OS185] gi|160873617|ref|YP_001552933.1| arginyl-tRNA synthetase [Shewanella baltica OS195] gi|217971704|ref|YP_002356455.1| arginyl-tRNA synthetase [Shewanella baltica OS223] gi|304411529|ref|ZP_07393142.1| arginyl-tRNA synthetase [Shewanella baltica OS183] gi|307306695|ref|ZP_07586437.1| arginyl-tRNA synthetase [Shewanella baltica BA175] gi|166232840|sp|A6WIK3|SYR_SHEB8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|189083547|sp|A9KYS9|SYR_SHEB9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|254782981|sp|B8E6G9|SYR_SHEB2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|151363642|gb|ABS06642.1| arginyl-tRNA synthetase [Shewanella baltica OS185] gi|160859139|gb|ABX47673.1| arginyl-tRNA synthetase [Shewanella baltica OS195] gi|217496839|gb|ACK45032.1| arginyl-tRNA synthetase [Shewanella baltica OS223] gi|304350056|gb|EFM14461.1| arginyl-tRNA synthetase [Shewanella baltica OS183] gi|306910663|gb|EFN41092.1| arginyl-tRNA synthetase [Shewanella baltica BA175] gi|315265846|gb|ADT92699.1| arginyl-tRNA synthetase [Shewanella baltica OS678] Length = 581 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 52/147 (35%), Positives = 83/147 (56%), Gaps = 2/147 (1%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 RI ++R +D +HG L+TN AM+L++ G +P +A+LI+ + V V IAG GFIN Sbjct: 29 RIQVDRTKDKSHGDLATNLAMMLTKVAGKNPRELAQLIIDTLPASAYVAKVEIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +++ S L L + V+ G L T V +++ S N MHVGH R ++GD++ Sbjct: 89 FFINDSALADQLQN-AVNDEHLGIKLPTPQTVV-VDYSSPNLAKEMHVGHLRSTIIGDSV 146 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTL 177 + F G++V R+ ++ D G Q L Sbjct: 147 VRALEFLGHKVIRQNHVGDWGTQFGML 173 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 53/206 (25%), Positives = 85/206 (41%), Gaps = 26/206 (12%) Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439 + NV ELVR M D +TL + VG +V++ L + + F F Sbjct: 402 EANVRALELVRSKNPDM---------DEVTLTEIARVVGISAVKYADLSKNRTSDYIFSF 452 Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 ++ + N Y+ YAY R IF++ D+ DL + V+ E E D Sbjct: 453 EQML-SFEGNTAPYLLYAYTRVAGIFKRVTDL--DLSQ---AKIVLEHEKEKDLGN---- 502 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 LA++ ++ +P+ L YLY+LA F + + A+N R Sbjct: 503 -KLAQFGEILSRVVDKGQPHVLCAYLYELAGAFSSFYE------ACPVLAADNDAQKNSR 555 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L A + GLN++G+E+ M Sbjct: 556 LLLAQLTARTLQKGLNLLGIETLERM 581 >gi|126176036|ref|YP_001052185.1| arginyl-tRNA synthetase [Shewanella baltica OS155] gi|166232839|sp|A3D9A3|SYR_SHEB5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|125999241|gb|ABN63316.1| arginyl-tRNA synthetase [Shewanella baltica OS155] Length = 581 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 52/147 (35%), Positives = 83/147 (56%), Gaps = 2/147 (1%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 RI ++R +D +HG L+TN AM+L++ G +P +A+LI+ + V V IAG GFIN Sbjct: 29 RIQVDRTKDKSHGDLATNLAMMLTKVAGKNPRELAQLIIDTLPASAYVAKVEIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +++ S L L + V+ G L T V +++ S N MHVGH R ++GD++ Sbjct: 89 FFINDSALADQLQN-AVNDEHLGIKLPTPQTVV-VDYSSPNLAKEMHVGHLRSTIIGDSV 146 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTL 177 + F G++V R+ ++ D G Q L Sbjct: 147 VRALEFLGHKVIRQNHVGDWGTQFGML 173 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 55/206 (26%), Positives = 85/206 (41%), Gaps = 26/206 (12%) Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439 + NV ELVR M D TL + VG +V++ L + + F F Sbjct: 402 EANVRALELVRSKNPDM---------DEATLTEIARVVGISAVKYADLSKNRTSDYIFSF 452 Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 ++ + N Y+ YAY R IF++ D+ DL + V+ E E D Sbjct: 453 EQML-SFEGNTAPYLLYAYTRVAGIFKRVTDL--DLSQ---AKIVLEHEKEKDLGN---- 502 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 LA++ ++ +P+ L YLY+LA F + P L A+N R Sbjct: 503 -KLAQFGEILSRVVDKGQPHVLCAYLYELAGAFSSFY---EACPVL---AADNDAQKNSR 555 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L A + GLN++G+E+ M Sbjct: 556 LLLAQLTARTLQKGLNLLGIETLERM 581 >gi|120600411|ref|YP_964985.1| arginyl-tRNA synthetase [Shewanella sp. W3-18-1] gi|166232844|sp|A1RP36|SYR_SHESW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|120560504|gb|ABM26431.1| arginyl-tRNA synthetase [Shewanella sp. W3-18-1] Length = 581 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 52/147 (35%), Positives = 83/147 (56%), Gaps = 2/147 (1%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 RI ++R +D +HG L+TN AM+L++ G +P +A+LI+ + V V IAG GFIN Sbjct: 29 RIQVDRTKDKSHGDLATNLAMMLTKVAGKNPRELAQLIIDTLPASAFVAKVEIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +++ S L L + V+ G L T V +++ S N MHVGH R ++GD++ Sbjct: 89 FFINDSALADQLQN-AVNDEHLGIKLPTPQTVV-VDYSSPNLAKEMHVGHLRSTIIGDSV 146 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTL 177 + F G++V R+ ++ D G Q L Sbjct: 147 VRALEFLGHKVIRQNHVGDWGTQFGML 173 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 85/206 (41%), Gaps = 26/206 (12%) Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439 + NV ELVR M D TL + VG +V++ L + + F F Sbjct: 402 EANVRALELVRSKNPDM---------DEETLAEIARVVGISAVKYADLSKNRTSDYIFSF 452 Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 ++ + N Y+ YAY R IF++ + DL + V+ E E D Sbjct: 453 EQML-SFEGNTAPYLLYAYTRVAGIFKRVTGL--DLSQ---AKIVLEHEKEKDLGN---- 502 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 LA++ ++ +P+ L YLY+LA F + P L A+N + R Sbjct: 503 -KLAQFGEILNRVVDKGQPHVLCAYLYELAGAFSSFY---EACPVL---AADNDEQKNSR 555 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L A + GLN++G+E+ M Sbjct: 556 LLLSQLTARTLQKGLNLLGIETLERM 581 >gi|320165286|gb|EFW42185.1| rars protein [Capsaspora owczarzaki ATCC 30864] Length = 742 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 132/551 (23%), Positives = 228/551 (41%), Gaps = 99/551 (17%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 +GFI + + L IL++IVV G+ + K +V I+F S N MHVGH R + Sbjct: 240 RGFITVVVPAKLLATILTNIVVHGVLPPKQ--EKKKRVIIDFSSPNIAKEMHVGHLRSTI 297 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205 +G++L L+ + G+EV R ++ D G Q L + + + N+S P G Y Sbjct: 298 IGESLCRLLEYRGFEVLRVNHVGDWGTQFGMLIAHLKDEFPN--FRNESP-PIGDLQAFY 354 Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVK-----DYSVQAMMKII----RDDLKALNIQH 256 + AD+ F + + +VK D V+ K+I R + + + + Sbjct: 355 KASKKRFDADE------EFKKRAYTEVVKLQAGTDADVRHAWKLICDESRREFELIYKRL 408 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 + I E P + ++ +L ++G+V + + RK + V Sbjct: 409 HVTIKEKGESFYQPM-MPSVVADLEKRGFV--------------QVEDGRKIMFVPDQAV 453 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVS 375 V+ KSDG YTY +DLA K + E D +IYV+ S +++ + + A V Sbjct: 454 PLTVE----KSDGGYTYDTSDLAAIKYRIEEEHADWIIYVVDVGQSLHLETVFSAAKHVG 509 Query: 376 ---EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV------------GSD 420 K +++ + LV L DG K R+GD + L ++DE G D Sbjct: 510 WLDPAKVRVDHVAFGLV-LGEDGK--KFKTRSGDTVRLVDLLDEAVERAKVVLDSKRGGD 566 Query: 421 ----------------SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 +V++ L + F F ++ + N Y+ YAY R SI Sbjct: 567 LQPEEYAAALDAVSYGAVKYADLSTSRTSDYTFSFDRMLKLVG-NTAPYLLYAYTRMSSI 625 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 R A +D + + EF + EL L L +P ++ T P+ L Sbjct: 626 ARNA-----GIDVS---KEIAKHPCEFTEGPELALARALIRFPEILNRITDDLMPHTLGS 677 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM---------RLQLVHAVASIINSGL 574 +LY++ ++ + +LR ++ + K T RL L A + ++ GL Sbjct: 678 FLYEICQLYSTFYE------KLRIIEHDVDKATGTKTIKSIHYPRLALCEAASLVLKQGL 731 Query: 575 NIIGVESPNEM 585 +I+G++ +M Sbjct: 732 SILGMDVVGKM 742 >gi|251778024|ref|ZP_04820944.1| arginine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082339|gb|EES48229.1| arginine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 563 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 127/539 (23%), Positives = 225/539 (41%), Gaps = 93/539 (17%) Query: 88 FINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N ++ + ++ I+ G YG + IG+G V +E+ S N P HVGH + Sbjct: 77 YLNFFVDKGVFAENTINKILKDGDSYGESNIGEGKTVCVEYSSPNIAKPFHVGHLFTTAI 136 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYYPGV 204 G++L + GY+V ++ D G Q L +S + W + AL P + Sbjct: 137 GNSLYKMFKKEGYDVVGLNHLGDWGTQFGKL-ISAYNRWVDEDAL----EKAPIDELLRI 191 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVK----DYSVQAMMKIIRD-DLKALNIQHDIF 259 Y+K + A+K S +E + K D QA+ K RD LK +DI Sbjct: 192 YVKF--HDEAEKDPS----LEDEGRMYFKKLETGDAEAQALWKRFRDLSLKEFERVYDIL 245 Query: 260 ISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 + D G+ + +++ L +G + E S Q ++ Sbjct: 246 GVKFDSLAGEAFYNDKMDVVVNELKDKGLLVE-------SNGAQ-------------VVM 285 Query: 317 GDDVDRP---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 DD + P +LK DG+ Y DLA Y K Y+ F IYV+GS + + K++ V Sbjct: 286 LDDYNMPPCIVLKGDGASIYATRDLAAAMYRKKTYD--FYKSIYVVGSPQALHFKQVFKV 343 Query: 371 AA-----------------------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407 +S +K ++ VLL +L+R + ++++ D Sbjct: 344 LELAGHEWANDCVHVGFGLVKFADRKLSTRKGEV-VLLDDLIRESVEKTLEVINEKNPDL 402 Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFR 466 V ++G ++ F L + + FD+ ++ + + P YVQY+YAR SI Sbjct: 403 ENKEEVAKKIGVGAIIFTYLKNSREKDIVFDWKEILSFEGETGP--YVQYSYARANSIIS 460 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 +A++I +D+ E +L+ LA + I+ AT EP L Y+ Sbjct: 461 RAENISSKVDYSKLSSK----------EEFELVKVLANFNNQIKLATDKLEPSILTRYVI 510 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++A F+ ++ + ++ L RL LV + +I +GL ++G++ +M Sbjct: 511 EVAKSFNKFYNAH------SVLNLDDEVLKATRLSLVKSSLQVIKNGLELLGIDVVEKM 563 >gi|326796968|ref|YP_004314788.1| Arginyl-tRNA synthetase [Marinomonas mediterranea MMB-1] gi|326547732|gb|ADZ92952.1| Arginyl-tRNA synthetase [Marinomonas mediterranea MMB-1] Length = 577 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 143/591 (24%), Positives = 233/591 (39%), Gaps = 98/591 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ L +P AE ++ ++ + D V IAG GFIN++L ++L + Sbjct: 37 GDYQANGIMGVAKKLKTNPRAFAEQVLEKLDLTDLADKVEIAGPGFINVFLKNAWLAQEQ 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 S+ S + + V +++ + N MHVGH R V+GD + + F G++V Sbjct: 97 KSLRKSE-RLDVVTVSEPQTVVVDYSAPNLAKEMHVGHLRSTVIGDAVVRTLEFLGHKVV 155 Query: 163 REYYINDAGAQIN----------------TLALS---VFWRYQQALYNNDSDLPEGYYPG 203 R+ ++ D G Q ++ALS F+R + +++D Sbjct: 156 RQNHVGDWGTQFGMLLAYMERLRAESSEISMALSDLETFYREAKKCFDDDEAFSVRAREL 215 Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII------RDDLKALNIQHD 257 V G E + +N E + V K + DDL+ N+ +D Sbjct: 216 VVKLQSGDEECKALWQDFINISLEHCEETYQMLGVSLERKNVMPESAYNDDLQ--NVIND 273 Query: 258 I----FISED---------DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 + I ED +F D I II G++Y TT + Sbjct: 274 LDAKGLIKEDQGAKCVFLEEFANKD-GEITPIIVQKTGGGFLY---------STTDLAAV 323 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF-DNMI--------YV 355 +Q + ++ DR L D + + F + GF D+ I V Sbjct: 324 RYRQNVLKA-------DRALYFVDARQSLHFEQI--FTLSRKAGFADDSISLEHMPFGTV 374 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 MGSD + R VA +++ LL E + K A D LR++ Sbjct: 375 MGSDGKPFKTRSGGVA--------KLSALLEEAQERAYKLVASKNPDMAED--ELRNIGR 424 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARCRSIFRQAKDIFPD 474 VG SV++ L + + D+ F S E N Y+QYAY+R SI R A D Sbjct: 425 VVGVASVKYADLSKNRTS--DYVFNWDTMLSFEGNTAPYLQYAYSRVASIVRNA-----D 477 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 +D ++ S + E L V L ++ I+ P+ L YLY+LA F Sbjct: 478 IDAAALQGDI----SVIEDQERALAVKLVQFEEAIQQVGNDGMPHFLCAYLYELAGTFMS 533 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P L+ + ++ RLQL AS + GL+++G+E+ M Sbjct: 534 FYEAC---PILK----ADEEVKNSRLQLALNTASTLKLGLSLLGIETLERM 577 >gi|146291657|ref|YP_001182081.1| arginyl-tRNA synthetase [Shewanella putrefaciens CN-32] gi|166232842|sp|A4Y2U9|SYR_SHEPC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|145563347|gb|ABP74282.1| arginyl-tRNA synthetase [Shewanella putrefaciens CN-32] Length = 581 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 52/147 (35%), Positives = 83/147 (56%), Gaps = 2/147 (1%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 RI ++R +D +HG L+TN AM+L++ G +P +A+LI+ + V V IAG GFIN Sbjct: 29 RIQVDRTKDKSHGDLATNLAMMLTKVAGKNPRELAQLIIDTLPASAFVAKVEIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +++ S L L + V+ G L T V +++ S N MHVGH R ++GD++ Sbjct: 89 FFINDSALADQLQN-AVNDEHLGIKLPTPQTVV-VDYSSPNLAKEMHVGHLRSTIIGDSV 146 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTL 177 + F G++V R+ ++ D G Q L Sbjct: 147 VRALEFLGHKVIRQNHVGDWGTQFGML 173 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 85/206 (41%), Gaps = 26/206 (12%) Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439 + NV ELVR M D TL + VG +V++ L + + F F Sbjct: 402 EANVRALELVRSKNPDM---------DEETLAEIARVVGISAVKYADLSKNRTSDYIFSF 452 Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 ++ + N Y+ YAY R IF++ + DL + V+ E E D Sbjct: 453 EQML-SFEGNTAPYLLYAYTRVAGIFKRVTGL--DLSQ---AKIVLEHEKEKDLGN---- 502 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 LA++ ++ +P+ L YLY+LA F + P L A+N + R Sbjct: 503 -KLAQFGEILNRVVDKGQPHVLCAYLYELAGAFSSFY---EACPVL---AADNDEQKNSR 555 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L A + GLN++G+E+ M Sbjct: 556 LLLSQLTARTLQKGLNLLGIETLERM 581 >gi|291545668|emb|CBL18776.1| arginyl-tRNA synthetase [Ruminococcus sp. SR1/5] Length = 588 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 121/609 (19%), Positives = 251/609 (41%), Gaps = 106/609 (17%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 V RP C + N AM ++ P IA+ +VA++ + GFINL Sbjct: 30 VSNRPDLCEY---QCNGAMAGAKAYHKAPFMIADDVVAQLSDSRIFSRAEVVKPGFINLD 86 Query: 93 LSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 ++P ++ + ++ + +E +N + I++ N P+HVGH R A++G++ Sbjct: 87 VNPEFVAEYMNKMAEDEKLSVETAKN----PKTIIIDYGGPNVAKPLHVGHLRSAIIGES 142 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG------ 203 + + F G++V + ++ D G Q+ + + R + +Y +DS G YP Sbjct: 143 IKRIGRFVGHKVIGDVHLGDWGLQMGLIITELKHRKPELVYFDDSFT--GEYPAEAPFTI 200 Query: 204 -----VYLKHVGKELADKY-------SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK- 250 +Y GK D+ ++ LL + ++ + +M + DLK Sbjct: 201 SELEEIYPCASGKSKEDEAYRNEALEATHLLQQGKPGYMAL-----WNHIMNVSVTDLKR 255 Query: 251 ---ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307 LN+ D++ E D P D+++++ ++G+ YE D+ Sbjct: 256 NYANLNVDFDLWKKESDAQPYIP----DMVEDMKKRGFAYE----------------DQG 295 Query: 308 QLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSG 362 L+ D + P LLKSDG+ Y DLA + + F D ++YV+ Sbjct: 296 ALVVDVKEESDTKEIPPCMLLKSDGASLYTTTDLATI-VERMKLFQPDEILYVVDKRQEL 354 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 + ++ A + + + +DG P K R G + L +++ ++ + Sbjct: 355 HFIQVFRCARKTGLVNPETKLSFLGFGTMNGKDGKPFKT--REGGVMRLENLIADIDEEM 412 Query: 422 VRFMMLWR--KNSELLD---------FDFCKVKEQSKENPVF--------------YVQY 456 R ++ R K+ + D + + Q+ ++ +F Y+ Y Sbjct: 413 YRKIVENRSVKDKDAKDTAKIVGLSAIKYGDLSNQATKDYIFDVDRFTSFEGNTGPYILY 472 Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 R +SI + + DL ++P + SE L++ L+ + ++ENA + Sbjct: 473 TIVRIKSILNR----YVQEGGDLSTGKILPA---VNASEKNLMLQLSGFAAMVENAFEEK 525 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 P+K+ Y+Y++++ F+ + + + ++ LQL+ ++ + +++ Sbjct: 526 APHKICAYIYEVSNAFNSFYHE------TKILSEEDQAQKESFLQLLQLTRRVLETSIDL 579 Query: 577 IGVESPNEM 585 +G +P+ M Sbjct: 580 LGFSAPDRM 588 >gi|78213959|ref|YP_382738.1| arginyl-tRNA synthetase [Synechococcus sp. CC9605] gi|109895048|sp|Q3AGU9|SYR_SYNSC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|78198418|gb|ABB36183.1| arginyl-tRNA synthetase [Synechococcus sp. CC9605] Length = 590 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 139/545 (25%), Positives = 221/545 (40%), Gaps = 93/545 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98 G N A+ L++PL P IA IV +++ DP + IAG GFINL + P L Sbjct: 40 GDFQANGALPLAKPLKQAPRQIATAIVEQLQADPAFTDLCLEPQIAGPGFINLTIRPERL 99 Query: 99 RKILSSIVVSGIE-YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 +S+ + G E G + V ++F S N MHVGH R ++GD+LA ++ F Sbjct: 100 AAEVSARL--GDERLGVPAVSNAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFR 157 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADK 216 G+ V R ++ D G Q L + +AL D+ DL + + + K D Sbjct: 158 GHPVLRLNHVGDWGTQFGMLITHLKQVAPEALDTADAVDLGDLV---AFYREAKKRFDDD 214 Query: 217 YSSELLNFPEEKWLPIVKDYSVQA---MMKIIRDDLKALNIQHDIFISEDDFHRGDP--S 271 + + + E L S++A + R + + + + DI +SE RG+ + Sbjct: 215 EAFQSTSRDEVVKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDILLSE----RGESFYN 270 Query: 272 P-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL----LK 326 P + +ID L K+ D D Q +F + G D +PL K Sbjct: 271 PFLPAVIDGL--------------KAAELLVTD-DGAQCVFLEGVQGKD-GKPLPVIVQK 314 Query: 327 SDGSYTYFAADLAYFKCKYER-----GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKA 379 SDG + Y DLA + ++ G ++YV + + + + VA A A Sbjct: 315 SDGGFNYATTDLAAIRYRFGAAPEGDGARRVVYVTDAGQANHFAGVFQVAERAGWIPDGA 374 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 ++ + LV+ DG K+ RAGD + LR ++DE Sbjct: 375 RLEHVPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVERAETDLRSRLKEEERSESEE 431 Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG +V++ L + F F ++ + N Y+ YA R I R+ Sbjct: 432 FIQHVAGTVGLAAVKYADLSQNRITNYQFSFDRMLA-LQGNTAPYLLYAVVRIAGIARKG 490 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 DL N Q SE E L+ L ++ VI P +L YL++L Sbjct: 491 G--------DLAATNAQLQFSE--PQEWALVRELLKFDAVIAEVEEELLPNRLCSYLFEL 540 Query: 529 ASVFH 533 + VF+ Sbjct: 541 SQVFN 545 >gi|159041586|ref|YP_001540838.1| arginyl-tRNA synthetase [Caldivirga maquilingensis IC-167] gi|157920421|gb|ABW01848.1| arginyl-tRNA synthetase [Caldivirga maquilingensis IC-167] Length = 630 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 127/579 (21%), Positives = 237/579 (40%), Gaps = 114/579 (19%) Query: 88 FINLYLSPS-----YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 FIN +L+ + Y R +L S + G +YG+ K V +E SANP P+H+GHCR Sbjct: 73 FINGFLNTNVNLINYSRLVLDSTIGLGPDYGKVPGVKRLNVIVEHTSANPLHPLHIGHCR 132 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN--NDSDLPEGY 200 V+GD+L L+ F G+ V+ +Y++D G Q+ LAL + + ++ N P+ Sbjct: 133 NMVLGDSLVRLLRFMGHNVSARFYLDDTGIQVMYLALG-YSKVRELAKNRIESGQKPDHV 191 Query: 201 YPGVY--------LKHVGKELADKYSSELLNFPEEK--WLPIVKDY--SVQAMMKIIRDD 248 +Y ++ + K L K E +E+ W+ ++ D+ + ++ + + Sbjct: 192 MWVIYSVTNAVAEVQRISKVLEGKSEEEYRELIKERDEWVGVIADWLSKDKELVNALVEA 251 Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIID---NLARQGY-------------------- 285 L ++++ ++ + GD ++ I+ NL +G+ Sbjct: 252 LSSIDVNAEVARMAKMYEDGD-EKVKGIVREAVNLVLKGFEETFKLFNVKFDSYDWESEI 310 Query: 286 -VYEG----ILPPPKSKTTQKCDMDRKQLLFRSTMVG------DDVDRP-------LLKS 327 VY G I+ + + +FR+ D++ P L +S Sbjct: 311 AVYSGLAKRIIMDLVKAAPKYVEFKDGVYVFRADKAAAELKLWDELKLPKFIPPATLNRS 370 Query: 328 DGSYTYFAADLAY-FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386 DG+ Y D+AY C D ++ V+ + + +L + + ++I Sbjct: 371 DGTTLYLTRDVAYAVWCLTNCNPDVVVRVIAVEQTHPQAQLRIMLKLLGYDASRIVHYAY 430 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE-----------------------VGSDSVR 423 E+V L KMS R G +T+ ++D+ V ++R Sbjct: 431 EMVNLGE----AKMSSRRGQAVTIDGLLDDAVKRVKAIASGRSGLNTDDVAYAVAVGAIR 486 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + + S+ + FD+ +V + ++ + F +QY Y R SI +A + D Sbjct: 487 YYFVSVSPSKQIVFDWGRVLDMNQNSGPF-IQYTYVRAYSILSKA-------NLDHIQYT 538 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA---SVFHGHWSHGR 540 V P S+ E LI+ + E+P V+ + + L ++ LA + F+ + Sbjct: 539 VPPTLSQ---EEGDLILMIGEFPEVLLRVSEDLKLENLVSFMNRLALEFNTFYEKYPVLN 595 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 P LR RL LV AV ++ + +NI+G+ Sbjct: 596 AEPGLR----------EFRLALVKAVKIVLENSMNILGI 624 >gi|312222441|emb|CBY02381.1| hypothetical protein [Leptosphaeria maculans] Length = 866 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 136/575 (23%), Positives = 226/575 (39%), Gaps = 117/575 (20%) Query: 89 INLYLSPSYLRKILSSIVV-SGIEYG--RNLIGK--------GTKVNIEFVSANPTGPMH 137 I + P L ++ +V+ SG YG +NL K ++ +EF S N P H Sbjct: 328 IGFFFKPETLTALVVPMVLKSGANYGFNKNLGLKNPLDPSSGAKRMIVEFSSPNIAKPFH 387 Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL- 196 GH R ++G LA+L +G+EV R Y+ D G Q LA+ L+ N+ +L Sbjct: 388 AGHLRSTIIGGFLANLYEGAGWEVIRMNYLGDWGKQYGVLAIGY------DLFGNEEELV 441 Query: 197 --PEGYYPGVYLK-----HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249 P G+ +Y+K H E + +E EE KD S Q KI + + Sbjct: 442 KNPIGHLYDIYVKVSSIQHDEAEQLKELKAEAAKLKEEG-----KDASEQE-AKIKKIET 495 Query: 250 KALNIQHDIFISEDDFHRGDPSPI------RDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 + ++ Q + G+P + RD+ +Q Y I S +Q D Sbjct: 496 EGIDEQARKYFK--GMVDGEPKALGIWKRFRDLSIEKYKQTYARLNIRYDDYSGESQVKD 553 Query: 304 --MDRKQLLFRSTMVGDDVDRPLL----------------KSDGSYTYFAADLAYFKCKY 345 M+ + V ++ + ++ K DG+ Y D+ + Sbjct: 554 ESMEEAAKIMWEKKVCEESEGAVIVDLTSHSKKLGKAVIKKKDGTSLYLTRDIGAAIERV 613 Query: 346 ER-GFDNMIYVMGSDHSGYVKRLEAVAAA-----VSEKKAQINVLLCELVRLYRDGMPIK 399 E+ FD MIYV+ S ++ +L + +SEK IN GM + Sbjct: 614 EKYHFDRMIYVVASQQDLHLAQLFKIEELMGRKDISEKCQHINF-----------GMVMG 662 Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWR----------KNSELLDFDFCKVKE----- 444 MS R G L ++ +VG M + K +++L V++ Sbjct: 663 MSTRKGTAKFLDDILRDVGEKMHEVMKGNQAKYEQVEDPVKTADILGISAVMVQDMKGKR 722 Query: 445 --------------QSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNVIPQES 489 + P Y+QYA+AR SI+R+A P + + DL N+ Sbjct: 723 INHYTFDMDRMTSFEGDTGP--YLQYAHARLCSIYRKATTADPSVAELDLSTANLSLLN- 779 Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549 + ++L+ LA +P N QEP + YL+ +A + H + V Sbjct: 780 --EPHAIELVRQLASWPDTFLNTLKTQEPTTVLTYLFKMAHALSSSYDHLQ-------VV 830 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 + R + + RL L A ++N+G+ ++G+ SP E Sbjct: 831 GSERDVMIARLALYVAARQVLNNGMRVLGL-SPVE 864 >gi|228985285|ref|ZP_04145448.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228774440|gb|EEM22843.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 562 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 137/621 (22%), Positives = 251/621 (40%), Gaps = 101/621 (16%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ L I +K+ILD +IE P+ G + L++ P IA Sbjct: 2 DYKMHFAESLSNIFTNELTQKQILD--LIESPKQDEFGD-AAFPCFSLAKQYKKAPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V G ++N++ + + +L +I+ EYG N G V Sbjct: 59 KEVAQKLS-DPFFTKVEAVGP-YVNVFFNRETVSDTVLKTILAEKEEYGHNHFGYEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA------ 178 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKW 176 Query: 179 --------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN- 223 ++ ++ + + +N+ +G + K + E D+ + EL N Sbjct: 177 GNEAVVKEDPIRELFKLYVQFHEEVKDNEELEEDGR---AWFKKL--EEGDEEAVELWNW 231 Query: 224 FPEEKWLPIVKDYSV----------QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273 F E + Y + +A + +D + +HD+ + Sbjct: 232 FRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEESEG--------- 282 Query: 274 RDIIDNLARQGYVYEGILPP----PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 ++ NL +G +PP T D L+R G D ++ + Sbjct: 283 -ALVVNLEEEG------MPPCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQ 335 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHS--GYVKRLEAVAAAVSEKKAQINVLLCE 387 S + +F + G+ +V G +H G++ + +S +K ++ +LL E Sbjct: 336 SLHF----NQFFTVLKKLGY---TWVDGMEHVPFGFILK---DGKKMSTRKGRV-ILLEE 384 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKE 444 ++ + + ++ + V +VG +V F L KN + + +F +K Sbjct: 385 VLEEAIELAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKF 442 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 + + P YVQY +AR SI R+ F F L D ++ L + Sbjct: 443 EGETGP--YVQYTHARACSILRKESVEFETCTFAL-----------KDDHSWSVVKLLNK 489 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 +P+VIE A EP ++ Y+ D+A F+ ++ + +R ++ + K + RL LV+ Sbjct: 490 FPQVIEIAFNKNEPSVISKYVLDVAQSFNKYYGN------VRILEESEEKDS--RLALVY 541 Query: 565 AVASIINSGLNIIGVESPNEM 585 AV ++ GL ++GVE+P EM Sbjct: 542 AVTVVLKEGLRLLGVEAPEEM 562 >gi|206975181|ref|ZP_03236095.1| arginyl-tRNA synthetase [Bacillus cereus H3081.97] gi|206746602|gb|EDZ57995.1| arginyl-tRNA synthetase [Bacillus cereus H3081.97] Length = 562 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 137/621 (22%), Positives = 251/621 (40%), Gaps = 101/621 (16%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ + L I +++ILD +IE P+ G + L++ P IA Sbjct: 2 DYKKQFAESLSNIFTNELTQQQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V G ++N++ + + +L +I+ EYG N G V Sbjct: 59 KEVAQKLS-DPFFAKVEAVGP-YVNVFFNRETVSDTVLKTILAEKEEYGHNHFGYEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA------ 178 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKW 176 Query: 179 --------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN- 223 ++ ++ + + +++ EG + K + E D+ + EL N Sbjct: 177 GNEAVVKEDPIRELFKLYVQFHEEVKDDEELEEEGR---AWFKKL--EEGDEEAVELWNW 231 Query: 224 FPEEKWLPIVKDYSV----------QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273 F E + Y + +A + +D + +HD+ + Sbjct: 232 FRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEESEG--------- 282 Query: 274 RDIIDNLARQGYVYEGILPP----PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 ++ NL +G +PP T D L+R G D ++ + Sbjct: 283 -ALVVNLEEEG------MPPCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQ 335 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHS--GYVKRLEAVAAAVSEKKAQINVLLCE 387 S + +F + G+ +V G +H G++ + +S +K ++ +LL E Sbjct: 336 SLHF----NQFFTVLKKLGY---TWVDGMEHVPFGFILK---DGKKMSTRKGRV-ILLEE 384 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKE 444 ++ + + ++ + V +VG +V F L KN + + +F +K Sbjct: 385 VLEEAIELAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFLLENMLKF 442 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 + + P YVQY +AR SI R+ F F L D ++ L + Sbjct: 443 EGETGP--YVQYTHARACSILRKESVEFETCTFAL-----------KDDHSWSVVKLLNK 489 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 +P+VIE A EP ++ Y+ D+A F+ ++ + +R + N K + RL LV+ Sbjct: 490 FPQVIEIAFNKNEPSVISKYVLDVAQSFNKYYGN------VRILNENAEKDS--RLALVY 541 Query: 565 AVASIINSGLNIIGVESPNEM 585 AV ++ GL ++GVE+P EM Sbjct: 542 AVTVVLKEGLRLLGVEAPEEM 562 >gi|229138910|ref|ZP_04267489.1| Arginyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26] gi|228644535|gb|EEL00788.1| Arginyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26] Length = 595 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 137/621 (22%), Positives = 251/621 (40%), Gaps = 101/621 (16%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ + L I +++ILD +IE P+ G + L++ P IA Sbjct: 35 DYKKQFAESLSNIFTNELTQQQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPAIIA 91 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V G ++N++ + + +L +I+ EYG N G V Sbjct: 92 KEVAQKLS-DPFFAKVEAVGP-YVNVFFNRETVSDTVLKTILAEKEEYGHNHFGYEKTVV 149 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA------ 178 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 150 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKLITAYKKW 209 Query: 179 --------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN- 223 ++ ++ + + +++ EG + K + E D+ + EL N Sbjct: 210 GNEAVVKEDPIRELFKLYVQFHEEVKDDEELEEEGR---AWFKKL--EEGDEEAVELWNW 264 Query: 224 FPEEKWLPIVKDYSV----------QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273 F E + Y + +A + +D + +HD+ + Sbjct: 265 FRHESLKEFSRIYELLGVEFTNFQGEAFYNNLMEDFIGILEEHDLLEESEG--------- 315 Query: 274 RDIIDNLARQGYVYEGILPP----PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 ++ NL +G +PP T D L+R G D ++ + Sbjct: 316 -ALVVNLEEEG------MPPCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQ 368 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHS--GYVKRLEAVAAAVSEKKAQINVLLCE 387 S + +F + G+ +V G +H G++ + +S +K ++ +LL E Sbjct: 369 SLHF----NQFFTVLKKLGY---TWVDGMEHVPFGFILK---DGKKMSTRKGRV-ILLEE 417 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC---KVKE 444 ++ + + ++ + V +VG +V F L KN + + +F +K Sbjct: 418 VLEEAIELAKQNIEEKNPNLKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKF 475 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 + + P YVQY +AR SI R+ F F L D ++ L + Sbjct: 476 EGETGP--YVQYTHARACSILRKESVEFETCTFAL-----------KDDHSWSVVKLLNK 522 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 +P+VIE A EP ++ Y+ D+A F+ ++ + +R + N K + RL LV+ Sbjct: 523 FPQVIEIAFNKNEPSVISKYVLDVAQSFNKYYGN------VRILNENAEKDS--RLALVY 574 Query: 565 AVASIINSGLNIIGVESPNEM 585 AV ++ GL ++GVE+P EM Sbjct: 575 AVTVVLKEGLRLLGVEAPEEM 595 >gi|255580290|ref|XP_002530974.1| arginyl-tRNA synthetase, putative [Ricinus communis] gi|223529450|gb|EEF31409.1| arginyl-tRNA synthetase, putative [Ricinus communis] Length = 615 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 122/536 (22%), Positives = 221/536 (41%), Gaps = 77/536 (14%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P+ + + I+ + ++S +AG GF+N+ LS ++ + + ++V+GIE + Sbjct: 94 NPVAVGQAIMRNLPFSKMIESSSVAGPGFVNIVLSNKWMAENIQKMLVNGIETWAPKLSI 153 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 V ++F S N +HVGH R ++GD+LA ++ FS EV R ++ D G Q L Sbjct: 154 KRAV-VDFSSPNIAKELHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIE 212 Query: 180 SVFWRYQQALYNNDS--DLPEGYYPGVYLKH-VGKELADKYSSELLNFPEEKWLPIVKDY 236 +F RY N+ D + +Y + + E ++ ++ + P + Sbjct: 213 FLFERYPNFEDVNECAIDNLQAFYKASKQRFDIDFEFKERAQKAVVRLQGGE--PKYRQA 270 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 Q + I R + + + + + E +P I +I+ L +QG V E Sbjct: 271 WAQ-ICDISRREFDMVYQRLRVQLEEKGESFYNPY-IPGVIEALTQQGLVEES------- 321 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA--YFKCKYERGFDNMIY 354 + +++F + G D+ +KSDG Y Y + DLA +++ E+ + +IY Sbjct: 322 --------EGARVIF---IEGYDIPLIAVKSDGGYNYASTDLAALWYRLNEEKA-EWIIY 369 Query: 355 VM-------------GSDHSGYVKRLEAVAAAVS---------EKKAQINVLLCELVRL- 391 V + +G++ + + V+ E + E+VRL Sbjct: 370 VTDAGQNQHFEMVFKAAKRAGWLLSADNLYPKVTHVGFGVLKGEDGKRFRTRSTEVVRLV 429 Query: 392 -------YRDGMPIKMSKRAGDFI--TLRHVVDEVGSDSVRFMMLWRKNSELLDFDF-CK 441 R + +A ++ L + VG +V++ L KN+ + D+ F Sbjct: 430 DLLDEAKMRSKTALIERGKAEEWTDDELEQTAEAVGYGAVKYADL--KNNRMTDYKFNFD 487 Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501 K N Y+ YA+AR SI R++ +L +N + E L +H Sbjct: 488 QMLNDKGNTAVYLLYAHARICSIIRKSGRDIEEL------KNTTTLVLD-HADERSLGLH 540 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH------GRENPRLRFVQAN 551 L + +E A I P L YLY L+ F +S+ G E RL +A Sbjct: 541 LLHFAETVEEACINLLPSVLCEYLYSLSEYFTKFYSNCQVVGSGEERSRLLLCEAT 596 >gi|194743500|ref|XP_001954238.1| GF18177 [Drosophila ananassae] gi|190627275|gb|EDV42799.1| GF18177 [Drosophila ananassae] Length = 570 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 116/513 (22%), Positives = 204/513 (39%), Gaps = 105/513 (20%) Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V +E+ S N P HVGH R ++G+ LA+L GY TR Y+ D G Q LAL V Sbjct: 113 VVVEYSSPNIAKPFHVGHLRSTIIGNVLANLHQHLGYRTTRLNYLGDWGTQFGLLALGVE 172 Query: 183 WRYQQALYNNDSDLPEGYYP--GVYLKHVGKELADKYSSELLNFPEE------------- 227 NN SD P +Y +V A + S E+ + Sbjct: 173 -------LNNVSDKTMQTSPIETLYKAYVVANKAAEESPEITQQARDLFTALEAGTDEKM 225 Query: 228 --KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285 KW + Y+++ + K+ L + D + E + + IR ++D + Sbjct: 226 AKKWQQ-YRQYTIEDLSKV----YSRLGVHFDSYEWESQYSQ---QQIRAVLDRM----- 272 Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345 ++ D+ ++ R ++ D P++KSDGS Y A D+A + Sbjct: 273 --------------READLLHRESDGREIVIVDGRRIPVIKSDGSTLYLARDIAALLTRL 318 Query: 346 ER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404 +R F ++YV+ + + + L A+++S++ + N+ + R++ MS R Sbjct: 319 DRFDFSRLLYVVDNGQADHFNALFKTASSLSDRLSLENLQHVKFGRIH------GMSTRQ 372 Query: 405 GDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELL 435 G I L+ V+DE +G +V +L ++ Sbjct: 373 GTAIFLKDVLDEARDIMREKRNISATTKENTSFDDEHVCDILGVSAVLVNVLKQRRQRDY 432 Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495 DF++ K Q + +QY + R ++ K++ DL+ ++ P F T Sbjct: 433 DFNW-KQALQVNGDTGIKLQYTHCRLNNLLENFKEV--DLE------DIKPSWDHFATEP 483 Query: 496 LQ---LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552 L+ L+ LA + + + + E L YL+ L + + R RL Q Sbjct: 484 LEALDLVYELARFDQNVWQSKEQLETCVLVNYLFGLCN------ATSRALKRLPVKQEAC 537 Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R+ RL L HA + G+ I+G+ ++M Sbjct: 538 RQKQSQRLLLFHAAKKTLQQGIQILGLRPLDQM 570 >gi|167625769|ref|YP_001676063.1| arginyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4] gi|189083548|sp|B0TVV1|SYR_SHEHH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|167355791|gb|ABZ78404.1| arginyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4] Length = 581 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 49/147 (33%), Positives = 82/147 (55%), Gaps = 2/147 (1%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 RI ++R +D +HG +TN AM+L++ G +P IA+L++ + V+ V IAG GFIN Sbjct: 29 RIQVDRTKDKSHGDFATNLAMMLTKAAGKNPREIAQLLIDNLPESAHVEKVEIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 ++ + L L + ++ G L T V +++ S N MHVGH R ++GD++ Sbjct: 89 FFIDDNALANQL-MVALNSDHLGLELPTPQTVV-VDYSSPNLAKEMHVGHLRSTIIGDSV 146 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTL 177 + F G++V R+ ++ D G Q L Sbjct: 147 VRALEFMGHKVIRQNHVGDWGTQFGML 173 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 17/180 (9%) Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 D L + VG SV++ L + + F F ++ + N Y+ YAY R IF Sbjct: 419 DEAELAEIARVVGIASVKYADLSKNRASDYIFSFEQML-SFEGNTAPYLLYAYTRVAGIF 477 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 ++A+D+ DL +I + + E L LA++ V+ +P+ L YL Sbjct: 478 KRAQDV------DLSDATIILEHEK----EKDLGTKLAQFGEVMTRMVGKGQPHALCGYL 527 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++LA F + P L ++K RL L A + GLN++G+E+ M Sbjct: 528 FELAGAFSSFY---EACPVLAAETEESKK---SRLLLSQLTAKTLKQGLNLLGLETLERM 581 >gi|83643984|ref|YP_432419.1| arginyl-tRNA synthetase [Hahella chejuensis KCTC 2396] gi|109894996|sp|Q2SMY0|SYR_HAHCH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|83632027|gb|ABC27994.1| arginyl-tRNA synthetase [Hahella chejuensis KCTC 2396] Length = 578 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 138/587 (23%), Positives = 237/587 (40%), Gaps = 89/587 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ L ++P +A ++ + + + V IAG GFIN++LS ++ + L Sbjct: 37 GDYQANGVMGAAKALKMNPRELATKVLDVLDLGDMAEKVEIAGPGFINIFLSKDWMSQSL 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 V++ L V +++ + N MHVGH R ++GD + + F G+ V Sbjct: 97 RQ-VLADPRLTIPLDSPKQTVVVDYSAPNLAKEMHVGHLRSTIIGDAVVRTLEFLGHRVI 155 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK---YSS 219 R+ ++ D G Q L Y L + + + ELAD Y Sbjct: 156 RQNHVGDWGTQFGML-----LAYMNKLKAENQ------------QTLSMELADLENFYRQ 198 Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH---DIFIS--EDDFHRGDPSPIR 274 F E+ P KD + Q ++K+ D + +++ DI + ED + R + S R Sbjct: 199 AKTCFDED---PEFKDSARQYVVKLQSGDQECVSLWKTFIDISLQHCEDVYERLNVSLTR 255 Query: 275 -DIIDNLARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFRSTMVG-DDVDRPLL--KS 327 D++ A Y LP +K + D + +F G DD PL+ KS Sbjct: 256 ADVMPESA-----YNEDLPNVIDDLREKGLLTNSDGAECVFMDEFKGKDDETLPLIVKKS 310 Query: 328 DGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSGYVKRLEAVA--AAVSEKKAQINV 383 DG Y Y DLA + + ER + ++Y + + S ++ ++ A A + Sbjct: 311 DGGYLYATTDLAALRYR-ERVLKANRVLYFVDARQSLHLNQVYAAGRKAGFVSPDMSLEH 369 Query: 384 LLCELVRLYRDGMPIKM----SKRAGDFIT---------------------LRHVVDEVG 418 + +V L DG P K + + D +T L + VG Sbjct: 370 MAFGMV-LGADGKPFKTRDGGTVKLADLLTEAQGRAYAVVKGKNPEMPEEELNRIAHVVG 428 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 +V++ L + S F F + + N YVQYAY+R ++F++ + + D Sbjct: 429 MAAVKYADLSKNRSSDYIFSFDAMLSL-EGNTAPYVQYAYSRVVNVFKKGEVGNLTFEGD 487 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L I E L V L ++ ++ + P+ L YLYDL+ F + Sbjct: 488 LQLAEPI---------ERALAVRLLQFNEILHSVASEGCPHILCGYLYDLSKEFASFYEG 538 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P L+ + RL L +A + GL+++G+E+ M Sbjct: 539 ---CPVLK----AEEPVRSSRLMLSLLIAKTLKQGLDLLGIETLERM 578 >gi|124024975|ref|YP_001014091.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A] gi|166232821|sp|A2C016|SYR_PROM1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|123960043|gb|ABM74826.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A] Length = 607 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 141/609 (23%), Positives = 241/609 (39%), Gaps = 114/609 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKGFINLYL-SPSY 97 G N A+ L++ + P IA+ I +++ D D + IAG GFINL + S + Sbjct: 47 GDFQINCALSLAKEINRPPRDIAQQIAKQLQQDNDFVRICNPPLIAGPGFINLSINSKTL 106 Query: 98 LRKI------------LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 + +I L IE ++ +V I+F S N MHVGH R + Sbjct: 107 ISEIHFRLNDKRLGVPLKKFNTDKIEEEKS----NNRVIIDFSSPNIAKEMHVGHLRSTI 162 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYY 201 +GD+LA ++ F GYEV R ++ D G Q L + + L+ D SDL Y Sbjct: 163 IGDSLARVLEFCGYEVLRLNHVGDWGTQFGMLITHLKEVVPEVLHTKDVVEISDLVNFYR 222 Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 + +K SE++N ++ + Q + R + + + + DI ++ Sbjct: 223 QAKKRFDEDQIFQNKSRSEVVNLQAGDKESLI---AWQLLCNQSRKEFQKIYDRLDIKLT 279 Query: 262 EDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 E RG+ + D+I++L + + Q +F +VG Sbjct: 280 E----RGESFYNKFLVDVINDLKNKKLLIND---------------QGAQCIFLDGLVGK 320 Query: 319 DVD-RPLL--KSDGSYTYFAADLAYFKCK-----YERGFDNMIYVMGSDHSGYVKRLEAV 370 D +P++ KSDG + Y DLA K + + G +IYV + + + + + Sbjct: 321 DGKPQPIIIQKSDGGFNYATTDLAAIKYRLTIPPHGDGACRLIYVTDAGQASHFSGVFQI 380 Query: 371 AAAVS--EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416 A + QI + LV+ DG K+ R+G+ I L ++DE Sbjct: 381 AKLANWIPTDCQIEHVPFGLVQ-GEDGK--KLKTRSGETIRLVDLLDEAIQRARDDLKNR 437 Query: 417 -------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457 VG S+++ L + F F K+ + N Y+ YA Sbjct: 438 LNTESRSENENFIDKVSTTVGIASIKYADLSQNRISNYQFSFDKMLSL-QGNTAPYLLYA 496 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS-ELQLIVHLAEYPRVIENATIAQ 516 R I R+ D+ NV Q +F+ S E LI L + +I Sbjct: 497 LVRIAGISRKGGDL-----------NVSSQNIQFNESQEWDLIRKLLQLDSIIAEVEKEL 545 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 P +L YL++L+ F+ + + P L+ + + RL L A + G+++ Sbjct: 546 LPNRLCGYLFELSQTFNRFYD---QVPILKASEPSR----ASRLVLCSITADTLKLGMSL 598 Query: 577 IGVESPNEM 585 +G+ + M Sbjct: 599 LGIPTLERM 607 >gi|313680442|ref|YP_004058181.1| arginyl-tRNA synthetase [Oceanithermus profundus DSM 14977] gi|313153157|gb|ADR37008.1| arginyl-tRNA synthetase [Oceanithermus profundus DSM 14977] Length = 606 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 146/620 (23%), Positives = 249/620 (40%), Gaps = 109/620 (17%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 V E P D G T A L+R L P IA + RI+ V V + G G++N + Sbjct: 29 VQETPADKP-GDYGTPVAFQLARVLRKAPPRIAAELAERIEPPEGVARVEVVG-GYVNFF 86 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L P++L + + V + +G KV +E S NP +HVGH R +GD +A Sbjct: 87 LDPAWLARAAARPVEPAPK-------QGGKVLVEHTSVNPNKELHVGHLRNVALGDAIAR 139 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 ++ F+G V YI+D G Q A S+F L + + + + Y++ + +E Sbjct: 140 ILDFAGRRVEVLNYIDDTGRQS---AESLFALEHYGLTYDGAKKYDHWVGEAYVR-LHRE 195 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQA-MMKIIRDDLKA---LNIQHDIFISEDDFHRG 268 + D+ + L L ++ ++ + K++ L+ LN ++D+ + E D R Sbjct: 196 MEDEEAKARLEPAIRAVLHRLEAGELRGEIEKLLTAQLETMWDLNAEYDVLVWESDLVR- 254 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LL 325 ++ + L + YV P + K MD + + ++ P LL Sbjct: 255 -EGLLQRALALLEQTPYVSR----PTEGKYAGALVMDTSAFI-------EGMEDPYLVLL 302 Query: 326 KSDGSYTYFAADLA--YFKCKYERGFDNMIYV-MGSDHSGYVKRLEAVAAAVSEKKAQIN 382 +SDG+ TY A D+A ++K G + S Y E + IN Sbjct: 303 RSDGTATYTAKDIAFQFWKMGLLEGLRFRPFTRQPSGRELYTSHPEGEPMPFGNAQETIN 362 Query: 383 V------------------------------LLCELVRLYRDGMPIKMSKRAGDFITLRH 412 V L E V L +G P +S R G +++ Sbjct: 363 VIDVRQSYPQQVLKAALEAAGRHDLAEGAYHLAYETVLL--EGRP--LSGRKGHTVSVDE 418 Query: 413 VVDE-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 V++E VG +VRF M+ + + +DF + + + Sbjct: 419 VLEEAVRRARAVIAEKNPGLENADAVARMVGIGAVRFAMVKTEPKKQIDFRWDQAL-SFE 477 Query: 448 ENPVFYVQYAYARCRSIFR--QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 + Y+QYA+AR SI R +A+ + DFD P E E L L + Sbjct: 478 GDAAPYLQYAHARAASILRKAEAEGLADAPDFD----RATPYEVE-------LAKVLLRF 526 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 ++ + + P+ LA YL DLA+ ++ +++ + V L +RL LV Sbjct: 527 EESVQKSAQLKTPHVLAQYLLDLAAAWNAYYNAKEDGRPATPVLTAPEGLRGLRLALVRR 586 Query: 566 VASIINSGLNIIGVESPNEM 585 + + +GL ++G+ +P M Sbjct: 587 LKQTVATGLGLLGIGAPEAM 606 >gi|328698412|ref|XP_001947348.2| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Acyrthosiphon pisum] Length = 592 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 134/590 (22%), Positives = 252/590 (42%), Gaps = 102/590 (17%) Query: 48 NAAMILSRPLGLDPLTIAELIVARIKID-----PDVDSVFIAGKGFINLYLSPSYLRKIL 102 NA+M + + L ++ +VA+ +D ++ V ++G+GFIN++LS + LR IL Sbjct: 53 NASMQICKLLKAKGENVSPNVVAKKLVDCLGQCNIIEKVDVSGQGFINVWLSRNKLRDIL 112 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 ++ + ++ + K+ ++F + N MHVGH R ++G++L+ + F G++V Sbjct: 113 QYVLENKLK--PKPLTNPQKIIVDFSAPNVAKEMHVGHLRSTIIGESLSRVFEFIGHDVL 170 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222 R +I D G Q L + Q N ++ P P L+ K+ + S+ L Sbjct: 171 RINHIGDWGTQFGMLIALL----QDKFPNYKTESP----PIKDLQQFYKQSKVLFDSD-L 221 Query: 223 NFPEEKWLPIVKDYS-----VQA---MMKIIRDDLKALNIQHDIFISEDDFHRGDP---S 271 F + + +VK S VQA + + R + + + + +I I E RG+ S Sbjct: 222 EFKKRAYDCVVKLQSMSPDHVQAWKLICDVSRKEFQKIYERLNISIIE----RGESFYQS 277 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + ++ +L +G++ D +++++ + ++KSDG + Sbjct: 278 RMETVVKDLEDKGFLEND---------------DGRKIMWSPE---SSIPLTVVKSDGGF 319 Query: 332 TYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVA---AAVSEKKAQINVLLCE 387 TY +D+A K + E D +IYV+ + S + + L+ A + K +++ + Sbjct: 320 TYDTSDIATLKQRIEEEKADWIIYVVDAGQSLHFETLKKCAIHSGFLDPSKVRMDFVGFG 379 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS- 446 +V L D K R+GD + L ++DE G R ++ + ++L + K+ E + Sbjct: 380 VV-LGEDKK--KFKTRSGDTVRLASLLDE-GIKRTRDKLVEKGRDKVLTDEELKLAETAL 435 Query: 447 ----------------------------KENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 K N Y+ YA R RSI DL+ Sbjct: 436 AYGCIKYADLCHNRNHDYVFSFDKMLDDKGNTAVYLLYALTRIRSIINNLGTYTQDLNES 495 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + S E +L L +P VI T + L YLYD+A+ F + + Sbjct: 496 I---------SLDHDKEWKLAKTLLRFPEVISKITDDFCLHHLCEYLYDVATTFSEFYDN 546 Query: 539 G---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +NP+ + K+ R+ L A + +GLN++G+ + + M Sbjct: 547 CYCIEKNPQTGEIV----KVFTGRILLCKVTAEYMETGLNLLGISTVSRM 592 >gi|87122857|ref|ZP_01078727.1| arginyl-tRNA synthetase [Marinomonas sp. MED121] gi|86161868|gb|EAQ63163.1| arginyl-tRNA synthetase [Marinomonas sp. MED121] Length = 577 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 135/597 (22%), Positives = 228/597 (38%), Gaps = 110/597 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ L +P A+ ++ + + D V IAG GFIN++L ++ L Sbjct: 37 GDYQANGMMGVAKKLKTNPREFAQKVLDLLDLSDVADKVEIAGPGFINIFLKNDWMSGAL 96 Query: 103 SSIVVSG-IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161 +S+ S ++ + + K + +++ S N MHVGH R V+GD + + F G+ V Sbjct: 97 ASLRKSARLDIAQ--VEKAQTIVVDYSSPNLAKEMHVGHLRSTVIGDAVVRTLEFLGHNV 154 Query: 162 TREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGYYP 202 R+ ++ D G Q L L F+R + +++D Sbjct: 155 VRQNHVGDWGTQFGMLLAYMERLRQENTEISMALSDLETFYRAAKTCFDDDEAFAARARE 214 Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII----------------- 245 V G E E +N E K V + + Sbjct: 215 LVVSLQSGDEECLALWQEFINISLEHCEATYKTLGVSLTRENVMPESAYNDDLHNVVAAL 274 Query: 246 --RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 +D L+ N +F+ E G+ +P +I G++Y Sbjct: 275 KEQDLLQESNGAQCVFMEEFANKEGEITP---VIVQKTGGGFLY--------------AT 317 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYT------YFAADLAYFKCKYERGFDNMIY--V 355 D L +R ++ + DR L D + Y A F K E ++M + V Sbjct: 318 TDLAALRYRQDVL--NFDRGLYFVDARQSLHFQQIYTLGRKAGF-VKPETSLEHMPFGTV 374 Query: 356 MGSD------HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 MG+D SG V +L + A ++ Q+ + K + D Sbjct: 375 MGTDGKPFKTRSGTVAKLSDLLAEAQDRAYQL--------------VAEKNPEMEED--E 418 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARCRSIFRQA 468 LR++ VG SV++ L + + D+ F S E N Y+ YAY+R SI R++ Sbjct: 419 LRNIGRVVGIASVKYADLSKNRTS--DYVFNWDTMLSFEGNTAPYLLYAYSRVASIVRRS 476 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 + +L D+ S ++ E L V L ++ ++ P+ L YLY+L Sbjct: 477 EIDVANLTGDI---------SLAESQERALAVKLMQFEEAVQQVANDGMPHNLCAYLYEL 527 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A F + P L +L RLQL AS + GL+++G+E+ M Sbjct: 528 AGTFMTFYEAC---PILN----AEDELKNSRLQLALNTASTLKQGLSLLGIETLERM 577 >gi|87123553|ref|ZP_01079404.1| arginyl-tRNA synthetase [Synechococcus sp. RS9917] gi|86169273|gb|EAQ70529.1| arginyl-tRNA synthetase [Synechococcus sp. RS9917] Length = 605 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 143/596 (23%), Positives = 232/596 (38%), Gaps = 90/596 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSV----FIAGKGFINLYLSPSYL 98 G N A+ L++PL P IA IV +++ DP ++ IAG GFINL L P L Sbjct: 47 GDFQANGALPLAKPLKQAPRQIASAIVEQLQADPSFSALCLEPVIAGPGFINLTLRPERL 106 Query: 99 RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158 ++ + G + V ++F S N MHVGH R ++GD+LA ++ F G Sbjct: 107 AAEVAE-RLGDPRLGVPAVQGSAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRG 165 Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKY 217 + V R ++ D G Q L + +AL D+ DL +L Y Sbjct: 166 HPVLRLNHVGDWGTQFGMLITHLKQVAPEALDTADAVDL--------------GDLVAFY 211 Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277 F +++ V + LKA + D S +F + I D + Sbjct: 212 REAKKRFDDDEAFQTTSREEVVKLQGGDPVSLKAWGLLCD--QSRREFQK-----IYDRL 264 Query: 278 D-NLARQGYVY-----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL----LKS 327 D +L+ +G + EG++ ++ D D + +F + G D +PL KS Sbjct: 265 DIHLSERGESFYNPYLEGVVTDLEAAGLLAVD-DGARCVFLEGVSGKD-GKPLPVIVQKS 322 Query: 328 DGSYTYFAADLAYFKCKYERGFDN-----MIYVMGSDHSGYVKRLEAVA--AAVSEKKAQ 380 DG + Y DLA + ++ D +IYV + + + + VA A + Sbjct: 323 DGGFNYATTDLAAIRYRFGGAPDGDGARRVIYVTDAGQANHFAGVFQVARRAGWVPDDGR 382 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416 + + LV+ DG K+ RAGD + LR ++DE Sbjct: 383 LEHVPFGLVQ-GDDGK--KLKTRAGDTVRLRDLLDEAVERAEADLRRRLEEEGRSEDEAF 439 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 VG +V++ L + F F ++ + N Y+ YA R I R+ Sbjct: 440 IQHVATTVGLAAVKYADLSQNRITNYQFSFDRML-ALQGNTAPYLLYAVVRIAGIARKGG 498 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 D+ +E E L+ L + VI P +L YL++L+ Sbjct: 499 DLALAGAGAAAGSGSDLHFNE--PQEWALVRELLRFDAVIAEVEEELLPNRLCTYLFELS 556 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 VF+ + + P L+ A R RL L A + GL ++G+ + M Sbjct: 557 QVFNRFYD---QVPVLKAEGATLRS----RLALCRLTADTLKCGLGLLGIATLERM 605 >gi|294777538|ref|ZP_06742989.1| arginine--tRNA ligase [Bacteroides vulgatus PC510] gi|294448606|gb|EFG17155.1| arginine--tRNA ligase [Bacteroides vulgatus PC510] Length = 606 Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 133/587 (22%), Positives = 233/587 (39%), Gaps = 129/587 (21%) Query: 76 PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK----VNIEFVSAN 131 P++ S + A KGF+NL ++ ++L+SI + EYG I K T+ V IE+ S N Sbjct: 72 PELVSAYNAVKGFLNLTIASDCWIELLNSIQAAP-EYG---IEKATENSPLVMIEYSSPN 127 Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 P+H+GH R ++G+ LA++M +G +V + +ND G I L+ W L Sbjct: 128 TNKPLHLGHVRNNLLGNALANVMTANGNKVVKTNIVNDRGIHICKSMLA--W-----LKY 180 Query: 192 NDSDLPE----------GYYPGVYLKHVG---KELADKYSSELLNFPE------------ 226 + + PE G Y + KH KEL +Y +E LN E Sbjct: 181 GNGETPESSGKKGDHLIGDYYVAFDKHYKAEVKELTAQYQAEGLNEEEAKAKAEANSPLM 240 Query: 227 -------EKWLPIVKDYSVQAMMKIIRD--------DLKALNIQHD-IFISEDDFHRGDP 270 KW D ++A+ K + D K + + D I+ + + G Sbjct: 241 LEAREMLRKWE--ANDPEIRALWKKMNDWVYAGFDETYKMMGVSFDKIYYESNTYLEGKE 298 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + + +G+ Y K + D+ T G D + LL+ DG+ Sbjct: 299 KVMEGL-----EKGFFYR------KEDNSVWADL---------TAEGLD-HKLLLRGDGT 337 Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 Y D+ K +++ + MIYV+G++ + + + L + + + + V + Sbjct: 338 SVYMTQDIGTAKLRFQDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEWGKGLVHFSYGM 397 Query: 390 RLYRDGMPIKMSKRAGDFI----TLRHVVDEVGSDSVRFMMLWRKNSELLD--------- 436 +G KM R G + + +++ S L E D Sbjct: 398 VELPEG---KMKSREGTVVDADDLMEAMIETAKETSAELGKLDGLTQEEADNIARIVGLG 454 Query: 437 -FDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKD---IFPDLDFD 478 + +K +++N F ++QY YAR +S+ R+A + + P+ Sbjct: 455 ALKYFILKVDARKNMTFNPKESIDFNGNTGPFIQYTYARIQSVLRKAAEAGIVIPE---- 510 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 +IP E E LI LA++ V++ A P +A Y YDL ++ + Sbjct: 511 -----IIPAGLELSAKEEGLIQMLADFKSVVKQAGSDYNPSIIANYAYDLVKEYNQFYHD 565 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ N L + RL L V I+ + + ++G+E P M Sbjct: 566 ------FSILREENEALKVFRLALSANVGKIVKTAMGLLGIEVPERM 606 >gi|254286807|ref|ZP_04961760.1| arginyl-tRNA synthetase [Vibrio cholerae AM-19226] gi|150423098|gb|EDN15046.1| arginyl-tRNA synthetase [Vibrio cholerae AM-19226] Length = 599 Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 135/615 (21%), Positives = 232/615 (37%), Gaps = 126/615 (20%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ LG +P A+ ++ + +D IAG GFIN++ Sbjct: 49 LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLDGIASKTEIAGPGFINIF 108 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 LS +L + + + G T V ++ + N MHVGH R ++GD + Sbjct: 109 LSEEFLAAQAEAALAD-VRLGVAQEAPKTIV-ADYSAPNVAKEMHVGHLRSTIIGDAVVR 166 Query: 153 LMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNND 193 + F G++V R +I D G Q L L F+R + LY+ D Sbjct: 167 TLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLYDED 226 Query: 194 SDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKIIRDDLK 250 E A Y +L F E W +V +Q Sbjct: 227 EQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ----------- 261 Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---CDMDRK 307 ++ ++ R + S R+ + + +Y +LP S K + D Sbjct: 262 ----------NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAVEDDGA 307 Query: 308 QLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY 363 Q++F G+ + + K DG + Y D+A K +YE G D ++Y + S + Sbjct: 308 QVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQHQH 367 Query: 364 VKRLEAVAAAVSEKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 + + A + K I NV L + L +DG P K RAG + L ++DE Sbjct: 368 LMQ----AWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFK--TRAGGTVRLADLLDEAQ 421 Query: 419 SDSVRFMMLWRKNSEL-----------LDFDFCKVKEQSKE-----------------NP 450 + ++ KN EL + K + SK N Sbjct: 422 ERAK--ALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNT 479 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 Y+QYAY R S+F +A +D + ++ E + E LI L ++ ++ Sbjct: 480 APYMQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQFEEAVQ 530 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 + +P+ + YL++LA +F + + A + RL+L A I Sbjct: 531 SVAREGQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESIKQSRLKLAALTAKTI 584 Query: 571 NSGLNIIGVESPNEM 585 GL ++G+++ M Sbjct: 585 KQGLALLGIDTLERM 599 >gi|39956339|ref|XP_364235.1| hypothetical protein MGG_09080 [Magnaporthe oryzae 70-15] gi|145016471|gb|EDK00901.1| hypothetical protein MGG_09080 [Magnaporthe oryzae 70-15] Length = 639 Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 141/582 (24%), Positives = 243/582 (41%), Gaps = 115/582 (19%) Query: 75 DPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRN-LIG--------KGTK-V 123 DP + + G F+ + P L R ++ I G +YG N +G KG K + Sbjct: 102 DPLFEKPVVTGY-FLQFWFKPDPLTRNLIPLIRELGDDYGNNKRLGLKDPQDPSKGNKKI 160 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EF S N P H GH R ++G LA+L +G++V R Y+ D G Q LAL+ F Sbjct: 161 IVEFSSPNIAKPFHAGHLRSTIIGGFLANLYKGAGWDVQRINYLGDWGKQYGLLALA-FE 219 Query: 184 RY--QQALYNNDSDLPEGYYPGVYLKHVGKELAD--------KYSSELLNFPEEKWLPIV 233 RY ++AL + P + +Y+K + E+++ K + E + E+K L Sbjct: 220 RYGDEEALKKD----PINHLFQLYVK-INSEMSEEKEQIESKKKAGEDVTQLEQKSL--- 271 Query: 234 KDYSVQAMMKIIRDDLKALNIQ----HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 D +A K + D +A Q D+ I ++ + + D + + V E Sbjct: 272 -DEQARAYFKKMVDGDEAAVAQWRRFRDLSIER---YKKTYARLNIWFDEYSGESQVTEE 327 Query: 290 ILPPPKS----KTTQKCDMDRKQLLFRSTMVGDD---VDRPLL-KSDGSYTYFAADLAYF 341 + K K D + F + G + ++RP++ K DG+ Y D++ Sbjct: 328 SMAKSAKTIADKGISKEDQGAVIIDFSEHVPGKEGKRLERPIIRKRDGTALYLTRDISEL 387 Query: 342 KCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400 ++ER FD MIYV+ S ++K+L + + K+ C+ + GM + M Sbjct: 388 LGRHERYNFDKMIYVVASQQDLHLKQLFKIVELMGHKEIADK---CQHINF---GMVLGM 441 Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-------------SELLDFDFCKVKEQSK 447 S R G L ++ +VG M RKN +++L V++ + Sbjct: 442 STRKGTVKFLDDILRDVGDKMHEVM---RKNDDKYSQVENPEAVADILGISSVMVQDMTG 498 Query: 448 E---NPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE-S 489 + N F Y+QYA+AR SI R+A + P+E + Sbjct: 499 KRINNYTFDMDAMTSFEGDTGPYLQYAHARVCSIARKA--------------GLTPEELA 544 Query: 490 EFDTSELQ------LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 D S LQ L+ L+++P ++N EP + YL+ ++ + H Sbjct: 545 TADLSLLQEPHARQLVRMLSQWPDTVQNTYKTLEPTTVLTYLFRMSHALSQSYDH----- 599 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LR V + ++L R+ L A ++ +G+ ++G+ M Sbjct: 600 -LRIV-GSEKELMKARMALYDATRIVLRNGMILLGLNPVERM 639 >gi|291166429|gb|EFE28475.1| arginine--tRNA ligase [Filifactor alocis ATCC 35896] Length = 567 Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 127/563 (22%), Positives = 230/563 (40%), Gaps = 86/563 (15%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGK 119 P IAE +V ++ + +S+ A G+IN ++ L K + V+S E YG++ GK Sbjct: 53 PNLIAEDLVKQLPDTEEFESI-KAISGYINFTINKKLLAKQVIETVLSEKENYGKSDYGK 111 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 V +E+ S N P H+GH R V+G L + G+ ++ D G Q L + Sbjct: 112 HKNVIVEYSSPNIAKPFHIGHIRSTVIGHALDRIYQSVGFNTIAINHLGDYGTQFGKLIV 171 Query: 180 SVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK-------WL 230 + +++ D ++L + Y V EL D+ E+K W Sbjct: 172 AFKKWGDRSVIEKDPINELLKLYVKFHEEAEVHSELEDEAREWFRKLEEDKDPEAVQLW- 230 Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290 ++D S++ K+ L I++D E + P+ II++L + + Sbjct: 231 QWIRDISLKEFDKV----YSMLGIEYDSLAGESFYSDKMPA----IIEHLENMNLLTD-- 280 Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYER- 347 S+ + D++ + P L K DGS Y DLA K + + Sbjct: 281 -----SQGAKIVDLEEYGM------------PPALIKKKDGSTLYITRDLAAAKYRKDTY 323 Query: 348 GFDNMIYVMGSDHSGYVKRLEAV-----------------------AAAVSEKKAQINVL 384 F IYV+G+ + K+ + V +S +K ++ V Sbjct: 324 DFYKNIYVVGAPQELHFKQWKKVHELSGYDWANDCIHVAFGTVSLEEGVLSTRKGRV-VF 382 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L +++ + + ++ + L V +VG ++ F L N+ + D+ F + Sbjct: 383 LEDVLNKAIEKTKDIIQQKNPNLENLDEVAKQVGVGAIVFQEL--SNTRIKDYTFSWDRA 440 Query: 445 QSKENPVF-YVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 + E Y QY +ARC S+ +A D+ D+DF + N +++I + Sbjct: 441 LTFEGETGPYTQYTHARCCSLLEKANVDLNTDIDFSILSTN---------NDAMKVIRIM 491 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 + + V+ EP+ L ++ D+ F+ + +NP L N K + L L Sbjct: 492 SSFEDVLLRCAKKYEPHHLTRFVLDVCQAFNKFY---HDNPIL----TANEKEKIAYLSL 544 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 V A +I + L I+G+E+P +M Sbjct: 545 VQASQIVIKNALWILGMEAPRKM 567 >gi|89898642|ref|YP_515752.1| arginyl-tRNA synthetase [Chlamydophila felis Fe/C-56] gi|109894981|sp|Q253D1|SYR_CHLFF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|89332014|dbj|BAE81607.1| arginyl tRNA synthetase [Chlamydophila felis Fe/C-56] Length = 562 Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 114/397 (28%), Positives = 171/397 (43%), Gaps = 60/397 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH N AM L R L + P IAE IV + D + SV +AG GFIN S +L++ L Sbjct: 38 GHYQCNDAMKLDRTLKMAPRAIAEAIVNNLPKD-NFSSVEVAGAGFINFTFSKEFLKQRL 96 Query: 103 ---SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 S+ + SG + K+ I+F S N MHVGH R ++GD LA + +F G Sbjct: 97 ETFSADLSSGF-----CVKDPKKIVIDFSSPNIAKDMHVGHLRSTIIGDCLARVFSFVGN 151 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG--KELADKY 217 +V R +I D G A + Y Q + D VG ++L Y Sbjct: 152 DVLRLNHIGDWGT-----AFGMLITYLQEEASED---------------VGNLEDLTALY 191 Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI-QHDIFISEDDFHRGDPSPIRDI 276 F E+ K S ++ + D ALN+ +H ISE F + I DI Sbjct: 192 KKAHARFAEDVEF---KKRSQANVVALQSGDPSALNLWKHICEISERAFQK-----IYDI 243 Query: 277 ID-NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS----TMVGDDVDRPLL--KSDG 329 + + ++G E P + Q D++ K+L+ S + + PL+ KSDG Sbjct: 244 LGVAIEKRG---ESFYNPFLPEIIQ--DLENKKLITVSDNAKCVFHEGFSIPLMVQKSDG 298 Query: 330 SYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVS---EKKAQINVLL 385 Y Y DLA + + E+ D +I V S + + LEA A A +K+ +V Sbjct: 299 GYNYATTDLAAMRYRVEKDHADKIIIVTDMGQSLHFQLLEATALAAGYLRDKETFSHVGF 358 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 L D K R+G+ I L+ +++ +V Sbjct: 359 G----LVLDSEGKKFKTRSGENIKLKELLNTAVDQAV 391 >gi|67471201|ref|XP_651552.1| arginyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS] gi|56468302|gb|EAL46165.1| arginyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS] Length = 573 Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 128/534 (23%), Positives = 227/534 (42%), Gaps = 107/534 (20%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIG 118 +P +A + +IK + + V + G F+N ++ S L K IL+ + ++G + +G Sbjct: 56 NPSAVASKLAEQIKPNDIISKVTVTGP-FLNFAINKSALTKMILNQVAEEKEKFGGSTLG 114 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG V +EF S N P H GH R ++G+ +A++ G+ V ++ D G+Q LA Sbjct: 115 KGQNVIVEFSSPNIAKPFHAGHLRSTIIGNFIANIHKLLGFNVISMNWLGDWGSQFGLLA 174 Query: 179 LSVFWRY--QQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSELLNF------PEEKW 229 + F +Y ++ L N P + VY+K + K D ++ +F +E + Sbjct: 175 IG-FEKYGSEEELKRN----PIRHLYDVYVKINADKAKDDNVRAQGKDFFKHMEMGDEAY 229 Query: 230 LPIVKDYSVQAMMKIIRDDLKA----LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285 L K + A+ +DLK LN+ D+F E + D + ++ +L +G Sbjct: 230 LVKWKLFRSLAL-----EDLKKTYGRLNVSFDVFTGESE---TDWDLVGQVLKDLEAKGI 281 Query: 286 VYEGILPPPKSKTTQKC---DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA-YF 341 SK + C D+++ +L L K DGS Y D+A Sbjct: 282 ----------SKMDKGCLIVDLEKYKLGI----------ALLKKDDGSTLYLTRDIASAI 321 Query: 342 KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401 K F YV+ + + + K+L + + A+ C + GM + MS Sbjct: 322 KRHNTYSFSKCYYVVATQQTLHFKQLFKILELLGYSWAK----ECYHISF---GMVMGMS 374 Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL-----------------------DFD 438 R G + L+ ++D+ + + M +KN E + DF+ Sbjct: 375 TRRGTAVFLQDILDDAKATMLENM---QKNPEKISEIDENEREAVADKIGVSAVFVQDFN 431 Query: 439 FCKVK--EQSKENPVF-------YVQYAYARCRSIFRQAKDIFP---DLDFDLFPRNVIP 486 ++K E ++E Y+QYA+ARC + R++ P +++F L Sbjct: 432 AKRIKDYEYNRERMTSFEGYTGPYLQYAHARCCGVERKSGIEIPKASEVNFSLLTE---- 487 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 +E+E LI+++A++ VI N EP L YL++L+ V +S R Sbjct: 488 KEAE------NLIMNIAKFGDVIMNTYRNLEPNTLVSYLFELSHVIASAFSTLR 535 >gi|226491618|ref|NP_001148134.1| arginyl-tRNA synthetase [Zea mays] gi|194698640|gb|ACF83404.1| unknown [Zea mays] gi|195616022|gb|ACG29841.1| arginyl-tRNA synthetase [Zea mays] Length = 604 Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 127/591 (21%), Positives = 230/591 (38%), Gaps = 141/591 (23%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +I + I + ++S +AG GF+N+ LS ++ + + ++V+GI+ ++ Sbjct: 78 NPNSIGQAIAKNLPSSDIIESASVAGPGFVNITLSNRWVAQRIQDMLVNGIKTWAPVLPV 137 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA- 178 V ++F S N MHVGH R ++GDTLA + FS V R ++ D G Q L Sbjct: 138 NRTV-VDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSNVVVLRRNHVGDWGTQFGMLIE 196 Query: 179 -------------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 L +F++ + +++D D GV G+ DKY Sbjct: 197 YLFEKFPNWQEIGCQAIGDLQIFYKASKHRFDSDPDFKARAQQGVVRLQGGE---DKY-- 251 Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279 E W I I R + + + ++ + E +P I +++ Sbjct: 252 ------REAWKKIC---------DISRSEFDLVYKRLNVVLEEKGESFYNPY-IPQVLEE 295 Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339 L+ +G + E + +++F + G + ++KSDG + Y + DL Sbjct: 296 LSNKGLIKES---------------EGARVIF---IQGHQIPLIVVKSDGGFNYASTDLT 337 Query: 340 --YFKCKYERG--------------FDNMIY---------------------------VM 356 +++ E+ FD M++ V+ Sbjct: 338 ALWYRLNVEQAEWIIYVTDVGQQQHFD-MVFSAAKMAGWLPDPSEKKFPKTSHVGFGLVL 396 Query: 357 GSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 GSD + V+ +E + A S K+++ L RL +G + + Sbjct: 397 GSDGKRFRTRSTEVVRLVELLDEAKSRSKSEL------LQRLTENGKIVDWTDEE----- 445 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS-KENPVFYVQYAYARCRSIFRQA 468 L + VG +V++ L KN+ L ++ F + S K N Y+QYA+AR SI R++ Sbjct: 446 LEQTSEAVGYGAVKYADL--KNNRLTNYTFSFEQMLSDKGNTAVYLQYAHARICSIIRKS 503 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 +L P E L ++L + V+E A P + YLY+L Sbjct: 504 NKNVEELKMSGAISLDHPDER-------VLGLYLIRFAEVVEEACTNLLPNVVCEYLYNL 556 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 + +F +++ Q RL L A A ++ N++G+ Sbjct: 557 SEMFTKFYTN---------CQVVGSPEETSRLLLCQATAVVMRQCFNLLGI 598 >gi|194894171|ref|XP_001978023.1| GG19367 [Drosophila erecta] gi|190649672|gb|EDV46950.1| GG19367 [Drosophila erecta] Length = 664 Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 138/593 (23%), Positives = 246/593 (41%), Gaps = 93/593 (15%) Query: 43 GHLSTNAAMILSRPL---GLD--PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N AM LS+ L G+ P IA + P ++ + IAG GF+N++LS Y Sbjct: 115 GDYQCNNAMGLSKKLKEKGISKAPRDIATELKGHCPPSPLIEKLEIAGAGFVNVFLSKDY 174 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 LS+++ G+E K +V ++F S N MHVGH R ++G++L L+ F Sbjct: 175 AASALSNLLRYGVEPPEV---KKRRVLVDFSSPNIAKQMHVGHLRSTIIGESLCRLLEFL 231 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215 ++V R ++ D G Q L + R+ L + SDL Y +E Sbjct: 232 QHDVIRTNHLGDWGTQFGMLIAHLEDRFPNYLNESPPISDLQLFYKESKKRFDEDEEFKK 291 Query: 216 KYSSELLNFPEEKWLP-IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---S 271 + S +++ +K +P +K + + + + R + + + + DI I E RG+ S Sbjct: 292 RAYSRVVSL--QKGVPNSIKAWEL--ICNVSRKEFQTIYERLDISIKE----RGESFYQS 343 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + +++ L +G + E D RK + T G + ++KSDG + Sbjct: 344 RMLSVVEYLRGKGLLEE--------------DEGRKIMWPDDTKTG--IPLTIVKSDGGF 387 Query: 332 TYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-- 388 TY +D+A + + E D +IYV+ + S + + A E+ +N L + Sbjct: 388 TYDTSDMAAIRYRLEEELCDWIIYVVDAGQSTHFNTIFKAA----ERSTILNPLTHRVDH 443 Query: 389 ----VRLYRDGMPIKMSKRAGDFITLRHVVDE-----------VGSDSVRFMMLWRKNSE 433 V L DG K R+GD + L ++DE G D V + E Sbjct: 444 VQFGVVLGEDGK--KFKTRSGDTVKLADLLDEGLKRSLLQLESRGRDKVLTPQELKDAQE 501 Query: 434 LLDF------DFCKVK-----------EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 L + D C + + + N Y+ Y Y R SI R + F +L Sbjct: 502 SLAYGCIKYSDLCHNRISDYIFSFDKMLEDRGNTAVYLLYTYTRICSIARNCGEDFSNLP 561 Query: 477 FDLFPRN-VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 L N V+ E E+ ++ L +H ++ + + L + +++ +VF Sbjct: 562 EILKKTNIVLAHEKEWKLAKTLLKLH-----DILIKCSKELFLHFLCEFCFEVCTVFTEF 616 Query: 536 WSHG---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +N + + N+ R+ L A A+++ I+G++ ++M Sbjct: 617 YDSCYCIEKNKQGDIIAVNHS-----RILLCEATAAVLRQCFYILGLKPVSKM 664 >gi|258626716|ref|ZP_05721540.1| Arginyl-tRNA synthetase [Vibrio mimicus VM603] gi|258581012|gb|EEW05937.1| Arginyl-tRNA synthetase [Vibrio mimicus VM603] Length = 597 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 130/612 (21%), Positives = 236/612 (38%), Gaps = 120/612 (19%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ LG +P A+ ++ + ++ IAG GFIN++ Sbjct: 47 LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLEGIASKTEIAGPGFINIF 106 Query: 93 LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 LS +L + + G+ E + ++ ++ + N MHVGH R ++G Sbjct: 107 LSEEFLAAQAEAALADERLGVAQEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIG 159 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188 D + + F G+ V R +I D G Q L L F+R + Sbjct: 160 DAVVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQKESGQISMELSDLEAFYRESKK 219 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245 LY+ D E A Y +L F E W +V +Q Sbjct: 220 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYD 265 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 R + +++ + + E ++ D P+ I+ +L +G E D Sbjct: 266 RLN---VSLTRENVMGESMYN--DMLPL--IVSDLKAKGLAVED---------------D 303 Query: 306 RKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361 Q++F G+ + + K DG + Y D+A K +YE G D ++Y + S Sbjct: 304 GAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQH 363 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416 ++ + + Q+++ + L +DG P K RAG + L ++DE Sbjct: 364 QHLMQAWTIVRKAGYIPEQVSLEHHAFGMMLGKDGRPFKT--RAGGTVRLADLLDEAEER 421 Query: 417 -----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453 V +V++ L + + FD+ + + N Y Sbjct: 422 AKALIKSKNPDLSADEKAKIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGNTAPY 480 Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513 +QYAY R S+F +A +D + ++ E + E LI L ++ +++ Sbjct: 481 MQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQFEEAVQSVA 531 Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573 +P+ + YL++LA +F + P L Q N ++ RL+L A I G Sbjct: 532 REGQPHIMCSYLFELAGIFSSFY---EACPILVAEQENVKQ---SRLKLAALTAKTIKQG 585 Query: 574 LNIIGVESPNEM 585 L ++G+E+ M Sbjct: 586 LALLGIETLERM 597 >gi|219684333|ref|ZP_03539277.1| arginyl-tRNA synthetase [Borrelia garinii PBr] gi|219672322|gb|EED29375.1| arginyl-tRNA synthetase [Borrelia garinii PBr] Length = 585 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 147/618 (23%), Positives = 256/618 (41%), Gaps = 96/618 (15%) Query: 11 LKNYLKEIDCKIKVEKKI-LDRIVI--ERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 +KN + I + + K I LD+I I ++P G +S LS+ L L TI+E Sbjct: 9 IKNEISIIVANLALSKNIKLDKININIQKPPKSDLGDISI-LIFELSKTLELPIATISEE 67 Query: 68 IVARIKIDPDVDSVFIAGKGFINLYL-SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 I+ +K ++ A ++N+ + Y+ + + YG + K+ +E Sbjct: 68 IIKTLKAKYEIK----AMGPYLNIKIPRKEYINNTIQMVNAQKDSYGTSKYLDNKKIILE 123 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWR 184 F S N P+HVGH R +G++L+ ++ G ++T+ IND G I + LA F Sbjct: 124 FSSPNTNKPLHVGHLRNDAIGESLSRILKAVGAKITKINLINDRGVHICKSMLAYKKFGN 183 Query: 185 Y---QQALYNNDSDLPEGYYPGVYLKHVGK-ELADKYSSELLNFPEEKWLPIVKDYSVQA 240 ++A D + E Y Y K+ + E A+K +LL E+K +K + Sbjct: 184 DITPEKAFKKGDHLIGEFYIE--YNKYSQENENAEKEIQDLLLKWEQKDANTIKLWEKLN 241 Query: 241 MMKI--IRDDLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPP 293 I I++ K NI D I++ + F G ++++ +G+ Y+ I Sbjct: 242 KWAIEGIKETYKITNISFDKIYLESEIFEIG-----KNVVLEGLEKGFCYKREDGAICID 296 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNM 352 S + +K + KQ + L++S+G+ Y DL + E FD M Sbjct: 297 LPSDSDEKAEAKAKQ-------------KVLIRSNGTSIYLTQDLGNIAIRTKEFNFDEM 343 Query: 353 IYVMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 IYV+GS+ + K L V+ + K Q+ L +V L DG KM R G+ I Sbjct: 344 IYVVGSEQIQHFKNLFFVSEKLGISKNKQLIHLSHGMVNLI-DG---KMKSREGNVIDGD 399 Query: 412 HVVDE-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446 +++ E + ++ + +L K++ D F K + S Sbjct: 400 NLISELIESIMPEITQKIDNKESAQKNALNIALGAIHYYLL--KSAVHKDILFNKKESLS 457 Query: 447 -KENPVFYVQYAYARCRSIFRQ----AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501 N Y+QY AR SI + + I ++F+L E ++I Sbjct: 458 FTGNSGPYIQYVGARINSILEKYNALSIPIIKKINFELLKH----------EKEWEIIKI 507 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 ++E I A P LA Y Y LA F ++ + + NN LT R++ Sbjct: 508 ISELEETIIKAAKDLNPSILANYSYSLAKHFSAYYQEA------KVIDINNTDLTAARIE 561 Query: 562 LVHAVASIINSGLNIIGV 579 + A+ I + ++++ + Sbjct: 562 FLKAILQTIKNCMHLLNI 579 >gi|77359609|ref|YP_339184.1| arginyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125] gi|109895020|sp|Q3IHI4|SYR_PSEHT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|76874520|emb|CAI85741.1| arginyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125] Length = 580 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 140/610 (22%), Positives = 245/610 (40%), Gaps = 81/610 (13%) Query: 22 IKVEKKILDRIVIERPRDC----------AHGHLSTNAAMILSRPLGLDPLTIAELIVAR 71 I VEK I + P D G NAAM ++ + +P +A+ I+ Sbjct: 6 ILVEKAIAAMTTVGLPADTNPAVTQSTRPQFGDYQINAAMGAAKKMKSNPRELAQKIIDN 65 Query: 72 IKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSAN 131 + + + IAG GFIN++L P +L + + + S + N KV +++ S N Sbjct: 66 LDVSDIAEKTEIAGPGFINIHLKPEFLAQSVKA-ANSDAKLAVNEHANPQKVVVDYSSPN 124 Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 MHVGH R ++GD + + F G V R+ ++ D G Q L + + Q + Sbjct: 125 LAKEMHVGHLRSTIIGDAIVRALEFRGDSVVRQNHMGDWGTQFGMLIAHLEDQISQGV-- 182 Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251 D D + + K D+ F ++ +VK A + + A Sbjct: 183 -DLDTVALADLETFYRDAKKRFDDEEG-----FADKARNYVVKLQGGDAHCEKLWKLFIA 236 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRKQL 309 +++H SE+ + R + + + D +A Y E I+ K K + Q+ Sbjct: 237 TSVKH----SEEVYKRLNVTLTQ--ADIMAESAYNAELNDIISLLKDKNI-AVESQGAQV 289 Query: 310 LFRSTMVGDDVDRPLL---KSDGSYTYFAADLAYFKCKYER---GFDNMIYVMGSDHSGY 363 +F + D + KS G + Y DLA C Y G D ++ + + S + Sbjct: 290 VFLDELANKDGEPSAFIVQKSGGGFLYATTDLA--ACDYRSNKLGADRILIFVDARQSLH 347 Query: 364 VKRLEAVAAAVS------------------------EKKAQINVLLCELVRLYRDGMPIK 399 ++E A + + V L +L+ + IK Sbjct: 348 FNQVELTARKAGFLRDETSYEFCPFGTMMGADNKPFKTRTGGTVKLADLLEESINRAAIK 407 Query: 400 MSKRAGDFITLR--HVVDEVGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQY 456 +++R D + +VG +V++ L + + F++ + + P Y+QY Sbjct: 408 LAERESDLSEQERSEIARKVGIGAVKYADLSKHRTSDYIFNWDSMLSFEGATAP--YLQY 465 Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 AY R RSIFR++ +D NV E + L+L+ +I AT Sbjct: 466 AYTRIRSIFRKS-----GVDAATLNSNVTIVEPQEKALALKLLQLEEVLDLMITEAT--- 517 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLR-FVQANNRKLTMMRLQLVHAVASIINSGLN 575 P+ L YLY+LAS++ + P L+ V+ N R RL L + V+ + +GL+ Sbjct: 518 -PHVLCGYLYELASLYMTFY---EACPVLKEGVEPNVRD---SRLVLCNLVSKTLETGLD 570 Query: 576 IIGVESPNEM 585 ++G+E +M Sbjct: 571 LLGIEVMEQM 580 >gi|332532695|ref|ZP_08408571.1| arginyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505] gi|332037911|gb|EGI74360.1| arginyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505] Length = 580 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 140/583 (24%), Positives = 236/583 (40%), Gaps = 79/583 (13%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G NAAM ++ + +P +A+ I+ + + IAG GFIN++L P +L + + Sbjct: 37 GDYQINAAMGAAKKMKSNPRELAQKIIDNLDVSDIAQKTEIAGPGFINIHLKPEFLAQSV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + + + N K KV +++ S N MHVGH R ++GD++ + F G V Sbjct: 97 KA-ANNDAKLAVNEHAKPQKVVVDYSSPNLAKEMHVGHLRSTIIGDSIVRALEFRGDTVV 155 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG-KELADKYSSEL 221 R+ ++ D G Q L + L + GV L V +L Y Sbjct: 156 RQNHMGDWGTQFGMLI---------------AHLEDQISQGVDLDTVALADLETFYRDAK 200 Query: 222 LNF-PEEKWLPIVKDYSVQAMMKIIR-DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279 F EE + +DY V+ + L L I + SE+ + R + + + D Sbjct: 201 KRFDDEEGFADKARDYVVKLQGGDAHCEKLWKLFIATSVKHSEEVYKRLNVTLTQ--ADI 258 Query: 280 LARQGYVYE--GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL---KSDGSYTYF 334 +A Y E I+ K K + Q++F + D + KS G + Y Sbjct: 259 MAESAYNAELNDIISLLKDKNI-AVESQGAQVVFLDELANKDGEPSAFIVQKSGGGFLYA 317 Query: 335 AADLAYFKCKYER---GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VR 390 DLA C Y G D ++ + + + + ++E A + + + C Sbjct: 318 TTDLA--ACDYRSNKLGADRILIFVDARQNLHFNQVELTARKAGLLRDETSYEFCPFGTM 375 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD------------ 438 + D P K R G + L +++E S + L + S+L D D Sbjct: 376 MGADNKPFKT--RTGGTVKLADLLEE--SINRAAAKLAERESDLSDSDRSEIARKVGIGA 431 Query: 439 --FCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 + + + + +F Y+QYAY R RSIFR++ L+ D+ Sbjct: 432 VKYADLSKHRTSDYIFNWDSMLSFEGATAPYLQYAYTRVRSIFRKSGVDAATLNSDVAI- 490 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 V PQE LQL L +I AT P+ L YLY+LAS++ + Sbjct: 491 -VEPQEKALALKLLQLEEVL---DLMISEAT----PHVLCGYLYELASLYMTFY---EAC 539 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P L+ + + RL L + V+ + +GL+++G+E +M Sbjct: 540 PVLK--EGVEPSVRDSRLVLCNLVSRTLETGLDLLGIEVMEQM 580 >gi|313884321|ref|ZP_07818083.1| arginine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8] gi|312620399|gb|EFR31826.1| arginine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8] Length = 563 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 139/599 (23%), Positives = 243/599 (40%), Gaps = 108/599 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IE+P + HG L+ L++ P IA+ +V +I D V G +IN + Sbjct: 27 LIEKPSNAEHGDLAF-PVFQLAKAFRKAPNLIAQELVEKID-GAHFDKVEAVGP-YINFF 83 Query: 93 LS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+ +I+S ++ YG +G G V +++ S N PM +GH R V+G++L Sbjct: 84 LNRKEKSNEIISQVIKEDSHYGEVDLGHGGTVVLDYSSPNIAKPMSMGHLRSTVIGNSLD 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK-HVG 210 + Y+ ++ D G Q L ++ +A D P +Y++ H Sbjct: 144 LMHQKMNYKTVSVNHLGDWGTQFGKLIVAYKGWGDEATVRKD---PVNELVKLYVEFHEK 200 Query: 211 KE----LADKYSSELLNF----PE--EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 E L D+ + PE E W KD S++ K+ DL ++ H + Sbjct: 201 SEEDPSLEDQGRAAFKKLEDGDPEMTELW-TWFKDESIKEFEKVY--DLMGISFDH--YT 255 Query: 261 SEDDFHRGDPSPIR-------DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313 E ++ ++ ++N A Y+ + LPP L+ RS Sbjct: 256 GESFYNDKMEDKLQILADKGISTVENGATLVYLDDEELPPA--------------LVKRS 301 Query: 314 TMVGDDVDRPLLKSDGSYTYFAADL--AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV- 370 DG+ Y D+ AY++ K F +Y++G++ + + ++L+A+ Sbjct: 302 --------------DGATLYITRDIATAYYR-KETYNFVKSLYIVGNEQANHFRQLKAIL 346 Query: 371 ----------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 +S +K +I VLL ++ + ++ + D Sbjct: 347 KRMGNDWSDDMVHIAFGLITLEGKKLSTRKGKI-VLLEAVMNEAMELALEQIEAKNPDLE 405 Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQ 467 V +VG +V F L DF +V + + + P YVQY YAR +S+ + Sbjct: 406 NKEEVARQVGVGAVIFHDLKSDRMNSFDFKLSEVVQFEGETGP--YVQYTYARAKSLLEK 463 Query: 468 -AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 K++ D ++L D +I LAEY + AT EP +A Y+ Sbjct: 464 YGKELKADEIYEL-----------TDEYAWAVIKKLAEYSDTLVAATEKYEPSMIARYVI 512 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA F+ ++ N RL N+ R+ LV A + ++ GL+++GVE+P M Sbjct: 513 QLAQAFNKYYG----NVRL----LNDDDQLAARMALVKATSIVLKDGLSLLGVEAPENM 563 >gi|119953378|ref|YP_945587.1| arginyl-tRNA synthetase [Borrelia turicatae 91E135] gi|254782944|sp|A1R025|SYR_BORT9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|119862149|gb|AAX17917.1| arginyl-tRNA synthetase [Borrelia turicatae 91E135] Length = 584 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 149/624 (23%), Positives = 256/624 (41%), Gaps = 103/624 (16%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 D +++ +KE+ K + LD+I ++++P G LS S+ L L Sbjct: 8 DLENKISKTIKELALKQNI---TLDKINIIMKKPPKSELGDLSI-LIFEFSKILKLSTSV 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTK 122 I E I+ +I S+ ++N+ + Y++ I+ + +YG N + K + Sbjct: 64 IIEEIIKQIGKKYTTKSM----GAYLNIKFNRKEYIKDIIKKVNEQKEKYGINNVLKNKR 119 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 + IEF S N P+HVGH R ++G++L+ ++ SG +VT+ IND G I L+ Sbjct: 120 IIIEFSSPNTNKPLHVGHLRNDIIGESLSRILKASGGQVTKINLINDRGTHICKTMLA-- 177 Query: 183 WRYQQALYNNDSDLP----EGYYPGVYLKH----VGKELADKYSSELLNFPEEKWLPIVK 234 Y++ N +L + Y+K+ ++A+ +LL EE VK Sbjct: 178 --YKKFGNNTTPELSLKKGDHLIGDFYVKYNEYAKNNKMAEDEIQQLLCKWEEGDEETVK 235 Query: 235 DYSVQAMMKI--IRDDLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYE--- 288 + I I++ K NI D I++ + F G R+II +G Y+ Sbjct: 236 LWKKLNKWAIEGIKETYKLTNITFDKIYLESEIFKIG-----REIILQGLEKGLCYKRED 290 Query: 289 -GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA-YFKCKYE 346 I +T + D KQ + LL+++G+ Y DL K E Sbjct: 291 GAICINIPIETNEMTDQKFKQ-------------KVLLRANGTSIYLTQDLGNILTRKNE 337 Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD--GMPI-KMSKR 403 FD MIYV+GS+ + K L VA + K LV L +P KM R Sbjct: 338 FDFDEMIYVVGSEQIHHFKTLFYVADKLGITKEN------NLVHLSYGMVNLPTGKMKSR 391 Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSE----------------------LLDFDFCK 441 G I +++ ++ S+S + R ++E + D Sbjct: 392 EGHVIDADNLIHDL-SESTMIEIKKRHSNEQDSKKIALNISLGAIHYYLLKTAIHKDILF 450 Query: 442 VKEQS---KENPVFYVQYAYARCRSIFRQAKDI-FP--DLDFDLFPRNVIPQESEFDTSE 495 KE+S N Y+QY AR SI + ++ P +++FDL + +E Sbjct: 451 NKEESLSFTGNSGPYIQYVGARINSILDKYDELNLPSKNINFDLL----------INENE 500 Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555 +I ++E+ I A + P + Y Y LA F ++ + + +N +L Sbjct: 501 WAIIKIISEFEEYIIKAAKDRNPSIIVNYSYLLAKSFSAYYQDT------KIIDKDNPEL 554 Query: 556 TMMRLQLVHAVASIINSGLNIIGV 579 T R L AV I + ++++ + Sbjct: 555 THARTDLSKAVLQTIKNCMHLLNI 578 >gi|330996517|ref|ZP_08320399.1| arginine--tRNA ligase [Paraprevotella xylaniphila YIT 11841] gi|329573073|gb|EGG54692.1| arginine--tRNA ligase [Paraprevotella xylaniphila YIT 11841] Length = 599 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 130/568 (22%), Positives = 235/568 (41%), Gaps = 98/568 (17%) Query: 76 PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTG 134 P V + F A KGF+NL ++P+ +L+ I ++G V IE+ S N Sbjct: 72 PSVVADFNAVKGFLNLVIAPASWIGLLTDIHQDA-QFGLTEATDHSPLVMIEYSSPNTNK 130 Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS 194 P+H+GH R ++G LA++MA +G V + +ND G I L+ + +Y + Sbjct: 131 PLHLGHVRNNLLGCALANIMAANGNRVVKTNIVNDRGIHICKSMLA-WLKYGNGATPEST 189 Query: 195 DLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD-- 248 + + G Y KH +++ + + + P++K+ + + ++K +D Sbjct: 190 GIKGDHLIGDYYVAFDKHYKEQIKELMEGGMSEEEAKNEAPLIKE-AREMLVKWENNDPE 248 Query: 249 LKAL--NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-EGILPPPKSKTTQKCDMD 305 +AL + ++ D ++ + D + + Y EG K K + D Sbjct: 249 TRALWRKMNEWVYAGFDVTYKA----LGVSFDKIYYESETYLEG-----KEKVLEGLD-- 297 Query: 306 RKQLLFRS---------TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355 K L FR T G D ++ LL+SDG+ Y D+ K ++ + D MIYV Sbjct: 298 -KGLFFRKEDGSVWADLTPEGLD-EKLLLRSDGTSVYMTQDIGTAKLRFRDYPIDKMIYV 355 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 +G++ + + + L + + + + V + +G KM R G + +V Sbjct: 356 VGNEQNYHFQVLSILLDKLGFEWGKDLVHFSYGMVELPNG---KMKSREGTVVDADDLVA 412 Query: 416 E------------------------------VGSDSVRFMML---WRKN-----SELLDF 437 E VG ++++ +L RKN +E +DF Sbjct: 413 EMIGSARKMSEDKINKLTDLSEDEANEIARIVGLGALKYFILKVDARKNMLFNPAESIDF 472 Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497 + N ++QY YAR RSI R+A + + P + Q ++ E+ Sbjct: 473 N---------GNTGPFIQYTYARIRSILRKASESGISI-----PETLSAQ-TDLSEKEIS 517 Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557 LI LA++P V++ A P +A Y YDL ++ + + + Sbjct: 518 LIQMLADFPNVVKQAGSDYNPSCIANYCYDLVKEYNQFYHD------FSILHEEDENKKT 571 Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L ++ II +G+ ++G+E P M Sbjct: 572 FRLVLSAEISRIIRTGMGLLGIEVPERM 599 >gi|170728748|ref|YP_001762774.1| arginyl-tRNA synthetase [Shewanella woodyi ATCC 51908] gi|238688680|sp|B1KK48|SYR_SHEWM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|169814095|gb|ACA88679.1| arginyl-tRNA synthetase [Shewanella woodyi ATCC 51908] Length = 581 Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 49/149 (32%), Positives = 82/149 (55%), Gaps = 6/149 (4%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 RI ++R +D HG +TN AM+L++ +P IA+LI+ + D V V IAG GFIN Sbjct: 29 RIQVDRTKDKTHGDFATNLAMMLTKIARKNPREIAQLIIDSLPEDAQVSKVEIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIG--KGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 ++ S L++ +++ + R I + V +++ S N MHVGH R ++GD Sbjct: 89 FFIDDS----ALANQLMTALNDDRLGIALPQAQTVVVDYSSPNLAKEMHVGHLRSTIIGD 144 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTL 177 ++ + F G++V R+ ++ D G Q L Sbjct: 145 SVVRALEFMGHKVIRQNHVGDWGTQFGML 173 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 43/180 (23%), Positives = 75/180 (41%), Gaps = 17/180 (9%) Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 D L + VG SV++ L + + F F ++ + N Y+ YAY R IF Sbjct: 419 DEAELAKIAKVVGISSVKYADLSKNRASDYIFSFEQML-SFEGNTAPYLLYAYTRVAGIF 477 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 ++A D+ DL + + + E +L LA++ V+ +P+ L YL Sbjct: 478 KRATDV------DLSDAKIQLEHEK----EKELGTKLAQFNEVLTRMVSKGQPHALCGYL 527 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++LA F + + A+ + RL L A + GL ++G+E+ M Sbjct: 528 FELAGAFSSFYEA------CPVLAADTEEQKKSRLLLAKLTAKTLKQGLGLLGIETLERM 581 >gi|331001659|ref|ZP_08325182.1| arginyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167] gi|330413380|gb|EGG92747.1| arginyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167] Length = 589 Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 135/611 (22%), Positives = 240/611 (39%), Gaps = 115/611 (18%) Query: 36 RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95 RP C + N AM ++ P+ IA +V +K + + + GFIN+ +S Sbjct: 33 RPDLCEY---QCNGAMAAAKEYQKKPIDIANEVVEILKDNDSFEKIEAIMPGFININISN 89 Query: 96 SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155 ++ K + + + +YG L K+ I++ AN P+H+GH R A++G++L L Sbjct: 90 DFIEKYMKDMSAAP-KYGIELDNPSKKIIIDYGGANVAKPLHIGHLRSAIIGESLKRLGR 148 Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALY---NNDSDLP----------EGYYP 202 F G EV + ++ D G Q+ + + R + +Y N D + P E YP Sbjct: 149 FFGNEVIADVHLGDWGLQMGLIIEELRERNPELVYFKENYDGEFPKEAPFTLNDLEEIYP 208 Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK----ALNIQHDI 258 K E + + E + + P + + Q +M + +DLK +L + DI Sbjct: 209 AASKKSKTDEEFKQRAQEATLALQSGYRPYREIW--QHIMNVSVEDLKKNYSSLLVDFDI 266 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + E D P I+D+ D + V EG L+ M GD Sbjct: 267 WKGESDADPYIPDLIKDLEDR--KIAGVSEG------------------ALVVDIAMEGD 306 Query: 319 DVDRP---LLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSD---HSGYVKRLEAV 370 + P + KSDG+ Y +DL + E+ + D IY+ H R+ + Sbjct: 307 KKELPPCIIRKSDGAALYATSDLGTL-IEREKLYSPDEYIYIADKRQELHYTQFFRVSRI 365 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430 A V + + + +DG P+K R G + L V+ ++ D+V Sbjct: 366 AGIVPDNHELKYIGFGTING--KDGKPLKT--RDGGVVRLETVIKDI-EDAV-------- 412 Query: 431 NSELLDFDFCKVKE------QSKENPVFYVQYAYARCRSIFRQA-KDIFPDLD-FDLFPR 482 F K+KE + N V A + + QA KD D+D F F Sbjct: 413 --------FAKIKESRDISDEEARNTAKIVGLAAIKYADLSNQATKDYIFDIDRFTSFEG 464 Query: 483 NVIP----------------QESEFDTSEL------------QLIVHLAEYPRVIENATI 514 N P ES + L +L + LA Y ++ A Sbjct: 465 NTGPYILYTIVRIKSILEKYYESGSEKVSLNDLTVPKEDIHKKLYMELAGYNEIMRAAWT 524 Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 P+K+ ++Y +++ F+ + ++ + +N L + ++ + + Sbjct: 525 ELAPHKICQFIYSVSNTFNSFYHE------IKILSESNETKKKGYLATILLTKELLEAAI 578 Query: 575 NIIGVESPNEM 585 +++G+E+PN+M Sbjct: 579 DLLGIEAPNKM 589 >gi|319760579|ref|YP_004124517.1| arginyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF] gi|318039293|gb|ADV33843.1| arginyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF] Length = 582 Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 136/596 (22%), Positives = 241/596 (40%), Gaps = 104/596 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N + +S+ L + ++ ++ I + V+ + GFIN++LS +++ Sbjct: 38 GDYQINGLIPISKLLNISVENFSKKLIKFINLQHMVEIIKFEQPGFINIFLSSTWIE--- 94 Query: 103 SSIVVSGIEYGRNLIGKGT------KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 + I Y NL G + I++ N MHVGH R V+GD+ A +++F Sbjct: 95 -----NQINYIGNLPNFGIYSKQQKTIIIDYSGPNIAKEMHVGHLRSTVIGDSTARILSF 149 Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYN------NDSDLPEGYY---PGVY-L 206 G+ V + +I D G Q L + + ++Q +N D+ E YY +Y + Sbjct: 150 LGHHVIKANHIGDWGTQFGML---IAYIHKQIPHNFSLNKIQSFDVLEKYYQEAKKIYDI 206 Query: 207 KHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKIIRDDLKALNI---QHDIFI 260 +LA Y +L + ++ W +V + SV K+ LNI + DI + Sbjct: 207 DPNFAKLARHYVVKLQQGDGYCKKIWQHLV-NISVSNNQKL----YNRLNITLKKSDI-M 260 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 E + P +RD+ + + I + T + D+K + S V Sbjct: 261 GESMYQNMLPHIVRDLKN---------KKIAVTSNNATVVFLNKDQKNEYYSSFGV---- 307 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVA--AAVSEK 377 + K DG Y Y D+A K + E D +IY S ++ + +A A K Sbjct: 308 --IIQKKDGGYLYSTTDIACIKYRCEILHADRIIYYTDSRQKQHLLQAWKIAHKAGYIPK 365 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437 +C ++ L ++ P + RAG+ + L +++E + +++RKN L D Sbjct: 366 SVSFEHHICGMI-LQKNRKPFQT--RAGNVLKLTTLLNEAFKKAHD--LIYRKNPNLEDI 420 Query: 438 DFCKV-----------KEQSKE-----------------NPVFYVQYAYARCRSIFRQAK 469 K+ E SK N Y+QYAY R SI ++ Sbjct: 421 KLNKLAHIISIGAIKYTELSKNRSTNYIFNWDTMLNFNGNTALYIQYAYTRIFSILKKTG 480 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 P+L + + +I ++ + L L ++ +IE P+ L YLY L+ Sbjct: 481 Q--PNLKKNKYKIQIITKKEKL------LATCLLQFNEIIEIIADQGTPHLLCNYLYKLS 532 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++F + ++ N L RL+L A I+ GL ++G+E+ M Sbjct: 533 ALFSSFYE------SYPILETKNIHLQHSRLKLSLFTAHILKQGLELLGIETSEYM 582 >gi|262166185|ref|ZP_06033922.1| arginyl-tRNA synthetase [Vibrio mimicus VM223] gi|262025901|gb|EEY44569.1| arginyl-tRNA synthetase [Vibrio mimicus VM223] Length = 597 Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 127/612 (20%), Positives = 234/612 (38%), Gaps = 120/612 (19%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ LG +P A+ ++ + ++ IAG GFIN++ Sbjct: 47 LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLEGIASKTEIAGPGFINIF 106 Query: 93 LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 LS +L + + G+ E + ++ ++ + N MHVGH R ++G Sbjct: 107 LSEEFLAAQAEAALADERLGVAQEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIG 159 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188 D + + F G++V R +I D G Q L L F+R + Sbjct: 160 DAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKESGEISMELSDLEAFYRESKK 219 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245 LY+ D E A Y +L F E W +V +Q Sbjct: 220 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYD 265 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 R + +++ + + E ++ D P+ I+ +L +G E D Sbjct: 266 RLN---VSLTRENVMGESMYN--DMLPL--IVSDLKAKGLAVED---------------D 303 Query: 306 RKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361 Q++F G+ + + K DG + Y D+A K +YE G D ++Y + S Sbjct: 304 GAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQH 363 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416 ++ + + Q+++ + L +DG P K RAG + L ++DE Sbjct: 364 QHLMQAWTIVRKAGYIPEQVSLEHHAFGMMLGKDGRPFKT--RAGGTVRLADLLDEAEER 421 Query: 417 -----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453 V +V++ L + + FD+ + + N Y Sbjct: 422 AKALIESKNPDLSADEKAKIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGNTAPY 480 Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513 +QYAY R S+F +A +D + ++ E + E LI L ++ +++ Sbjct: 481 MQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQFEEAVQSVA 531 Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573 +P+ + YL++LA +F + + A + RL+L A I G Sbjct: 532 REGQPHIMCSYLFELAGIFSSFYE------ACPILVAEQESVKQSRLKLAALTAKTIKQG 585 Query: 574 LNIIGVESPNEM 585 L ++G+E+ M Sbjct: 586 LALLGIETLERM 597 >gi|260436601|ref|ZP_05790571.1| arginyl-tRNA synthetase [Synechococcus sp. WH 8109] gi|260414475|gb|EEX07771.1| arginyl-tRNA synthetase [Synechococcus sp. WH 8109] Length = 590 Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 139/545 (25%), Positives = 220/545 (40%), Gaps = 93/545 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98 G N A+ L++PL P IA IV +++ DP + IAG GFINL + P L Sbjct: 40 GDFQANGALPLAKPLKQAPRQIASAIVEQLQADPAFTDLCLEPQIAGPGFINLTIRPERL 99 Query: 99 RKILSSIVVSGIE-YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 +S+ + G E G + V ++F S N MHVGH R ++GD+LA ++ F Sbjct: 100 AAEVSARL--GDERLGVPAVSNAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFR 157 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADK 216 G+ V R ++ D G Q L + +AL D+ DL + + + K D Sbjct: 158 GHPVLRLNHVGDWGTQFGMLITHLKQVAPEALDTADAVDLGDLV---AFYREAKKRFDDD 214 Query: 217 YSSELLNFPEEKWLPIVKDYSVQA---MMKIIRDDLKALNIQHDIFISEDDFHRGDP--S 271 + + + E L S++A + R + + + + DI +SE RG+ + Sbjct: 215 EAFQSTSRDEVVKLQGGDPVSLKAWGLLCAQSRREFQKIYDRLDIRLSE----RGESFYN 270 Query: 272 P-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL----LK 326 P + +ID L K+ D D Q +F M G D +PL K Sbjct: 271 PFLPAVIDGL--------------KAAELLVTD-DGAQCVFLEGMQGKD-SKPLPVIVQK 314 Query: 327 SDGSYTYFAADLAYFKCKY-----ERGFDNMIYVMGSDHSGYVKRLEAVA--AAVSEKKA 379 SDG + Y DLA + ++ G ++YV + + + + VA A A Sbjct: 315 SDGGFNYATTDLAAIRYRFGVAPEGDGARRVVYVTDAGQANHFAGVFQVAERAGWIPDGA 374 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 ++ + LV+ DG K+ RAGD + LR ++DE Sbjct: 375 RLEHVPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVERAETDLRSRLKEEERSESEE 431 Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG +V++ L + F F ++ + N Y+ YA R I R+ Sbjct: 432 FIQHVAGTVGLAAVKYADLSQNRITNYQFSFDRMLAL-QGNTAPYLLYALVRIAGIARKG 490 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 DL N Q SE E L+ L ++ VI P +L Y ++L Sbjct: 491 G--------DLAGTNAQLQFSE--PQEWALVRELLKFDAVIAEVEEELLPNRLCSYTFEL 540 Query: 529 ASVFH 533 + VF+ Sbjct: 541 SQVFN 545 >gi|203284498|ref|YP_002222238.1| arginyl-tRNA synthetase [Borrelia duttonii Ly] gi|238690568|sp|B5RME6|SYR_BORDL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|201083941|gb|ACH93532.1| arginyl-tRNA synthetase [Borrelia duttonii Ly] Length = 585 Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 141/619 (22%), Positives = 258/619 (41%), Gaps = 90/619 (14%) Query: 5 ADFSSRLKNYLKEI--DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 AD ++++ +KE+ IK++K IV+++P G LS S+ L L Sbjct: 7 ADLKNKIQKTIKELALSSNIKLDK---INIVMQKPPKSEMGDLSI-LIFEFSKILKLSIP 62 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGT 121 I + I+ +I + S+ ++N+ + Y++ + + YG N + Sbjct: 63 VITQEIIKQIGNEYKTKSM----GPYLNIKFNRKEYIQNTIKKVNKEKENYGANNSLQNK 118 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLAL 179 K IEF S N P+HVGH R ++G++L+ ++ SG +VT+ IND G I + LA Sbjct: 119 KTIIEFSSPNTNKPLHVGHLRNDIIGESLSRILKASGSKVTKINLINDRGTHICKSMLAY 178 Query: 180 SVFWRY---QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236 F + A D + + Y E+A+ +LL E+ V+ + Sbjct: 179 KKFGNNITPEIAQKKGDHLIGDFYVKYNEYASQNSEIAENEIQQLLCQWEQGDEKTVQLW 238 Query: 237 SVQAMMKI--IRDDLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYEG---- 289 + I I++ NI D I++ + F G R+++ N ++G Y+ Sbjct: 239 TKLNKWAIDGIKETYNTTNITFDKIYLESEIFKIG-----REVVINGLKEGLCYKREDGA 293 Query: 290 -ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC-KYER 347 + P T+K ++D + F+ + LL+++G+ Y DL K E Sbjct: 294 ICINIP----TEKNNIDNQN--FKQ--------KVLLRANGTSIYLTQDLGNIVARKNEF 339 Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407 FD MIYV+GS+ + K L VA + + L + +G KM R G+ Sbjct: 340 DFDEMIYVVGSEQIHHFKTLFYVADKLGVTNENNLIHLSYGMVNLPEG---KMKSREGNI 396 Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELL-----------------------DFDFCKVKE 444 I +++ ++ ++ + +N + L D F K + Sbjct: 397 IDADNLIHDLSQSTMLELKKRYENEQNLQKLALNISLGAIHYYLLKTAIHKDILFNKTES 456 Query: 445 QS-KENPVFYVQYAYARCRSIFRQAKDI---FPDLDFDLFPRNVIPQESEFDTSELQLIV 500 S N Y+QY AR SI + ++ + +FDL + +E ++I Sbjct: 457 LSFTGNSGPYIQYVGARINSILDKYNNLNLANKNTNFDLL----------VNENEWEIIK 506 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 ++E+ I A+ + P +A Y Y LA F ++ + + +N +LT R+ Sbjct: 507 IISEFEEYIIKASKDRNPSIIANYSYLLAKNFSTYYQD------TKIIDKDNLELTHARI 560 Query: 561 QLVHAVASIINSGLNIIGV 579 L AV I + ++++ + Sbjct: 561 DLAKAVLQTIKNCMHLLNI 579 >gi|258621159|ref|ZP_05716193.1| Arginyl-tRNA synthetase [Vibrio mimicus VM573] gi|258586547|gb|EEW11262.1| Arginyl-tRNA synthetase [Vibrio mimicus VM573] Length = 597 Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 127/612 (20%), Positives = 234/612 (38%), Gaps = 120/612 (19%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ LG +P A+ ++ + ++ IAG GFIN++ Sbjct: 47 LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLEGIASKTEIAGPGFINIF 106 Query: 93 LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 LS +L + + G+ E + ++ ++ + N MHVGH R ++G Sbjct: 107 LSEEFLAAQAEAALADERLGVAQEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIG 159 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188 D + + F G++V R +I D G Q L L F+R + Sbjct: 160 DAVVRTLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEISMELSDLEAFYRESKK 219 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245 LY+ D E A Y +L F E W +V +Q Sbjct: 220 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYD 265 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 R + +++ + + E ++ D P+ I+ +L +G E D Sbjct: 266 RLN---VSLTRENVMGESMYN--DMLPL--IVSDLKAKGLAVED---------------D 303 Query: 306 RKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361 Q++F G+ + + K DG + Y D+A K +YE G D ++Y + S Sbjct: 304 GAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQH 363 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416 ++ + + Q+++ + L +DG P K RAG + L ++DE Sbjct: 364 QHLMQAWTIVRKAGYIPEQVSLEHHAFGMMLGKDGRPFKT--RAGGTVRLADLLDEAEER 421 Query: 417 -----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453 V +V++ L + + FD+ + + N Y Sbjct: 422 AKALIESKNPDLSADEKAKIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGNTAPY 480 Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513 +QYAY R S+F +A +D + ++ E + E LI L ++ +++ Sbjct: 481 MQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQFEEAVQSVA 531 Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573 +P+ + YL++LA +F + + A + RL+L A I G Sbjct: 532 REGQPHIMCSYLFELAGIFSSFYE------ACPILVAEQESVKQSRLKLAALTAKTIKQG 585 Query: 574 LNIIGVESPNEM 585 L ++G+E+ M Sbjct: 586 LALLGIETLERM 597 >gi|161528194|ref|YP_001582020.1| arginyl-tRNA synthetase [Nitrosopumilus maritimus SCM1] gi|160339495|gb|ABX12582.1| arginyl-tRNA synthetase [Nitrosopumilus maritimus SCM1] Length = 628 Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 144/667 (21%), Positives = 267/667 (40%), Gaps = 133/667 (19%) Query: 11 LKNYLKEIDCKIKVEKKILDRIVIE------RPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 K+ L EI+ + KILD + I P G +S+N + +L++ L P I Sbjct: 3 FKSILDEIENNLN---KILDDLSISDVKFSVEPAKPGFGDVSSNVSFLLAKQLKKSPKEI 59 Query: 65 AELIVARIK--IDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGT 121 +E++ + + V G++N Y P + ILS + E+G IGK + Sbjct: 60 SEMLSEKYSQCVSTLVSKSESHPSGYLNFYADWPKLNQLILSESNLP--EFGDVDIGKNS 117 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 + +E S NP +H+GH R ++GDT++ ++ + Y+V Y++D+G Q+ + + Sbjct: 118 TIVVEHTSVNPNKALHIGHIRNIIIGDTISRILQKANYKVNVLNYVDDSGLQVADIIVG- 176 Query: 182 FWRYQQALYNNDSDLPEG----YYPG--VYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235 F + + + P+G +Y G VY+K K D S E + K L Sbjct: 177 FKHFGYPI-----EPPQGKKFDHYCGDDVYVKTTEKYEQDS-SLEEIRKNVLKELEDGTS 230 Query: 236 YSVQAMMKIIRDDL-KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294 + Q KI R L L ++ +S D + + R G +++GI Sbjct: 231 ETAQFADKITRRVLSNQLETCWNLAVSYDCLN---------FESQIIRSG-LWDGIFEKL 280 Query: 295 KSKTTQKCDMDRKQ---LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK------- 344 K + + D K + R G + D+ +++S+G+ TY A D+ Y K Sbjct: 281 KEMNLVEFENDGKNAGCWVIRGE--GKEEDKVIVRSNGTATYIAKDIPYAAWKLGLLDDP 338 Query: 345 --YER--------------------------GFDNMIYVMGSDHS----------GYVKR 366 YE+ D +I V+ S + G K Sbjct: 339 FHYEKYEKEQPNSRVLWQTILNDGASESQNFSGDKVITVIDSRQARLQKIITSLMGKFKS 398 Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD----------- 415 + + + ++ +++ L DG +MS R G ++ V D Sbjct: 399 IPDAYVHLGYESVTLSSDTAKILGLETDGKQAQMSGRKGLYVNADSVYDLLKEKTTEETK 458 Query: 416 ----------------EVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAY 458 V ++R+ M+ + +++ FD K + + P Y+QY + Sbjct: 459 KRHPEMDDSEIEKISHSVSVATLRYEMIKQDLDKIIAFDLTKSLSLEGDTAP--YIQYTH 516 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 AR I ++ P +D D +++ ++SE D L+ + + + +A P Sbjct: 517 ARASRILEKSGRT-PSIDVDF---SLLKEQSEID-----LVKMIGLFNLQVRDAANNLSP 567 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 ++ Y +DLA F+ + + + + + KL RL LV++ I LN++G Sbjct: 568 KVISRYCHDLAVTFNSFYE------KSKVLDLGDEKLENSRLCLVNSFKITIEKALNLLG 621 Query: 579 VESPNEM 585 + +P++M Sbjct: 622 ISAPDKM 628 >gi|224064484|ref|XP_002301499.1| predicted protein [Populus trichocarpa] gi|222843225|gb|EEE80772.1| predicted protein [Populus trichocarpa] Length = 590 Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 138/592 (23%), Positives = 240/592 (40%), Gaps = 105/592 (17%) Query: 43 GHLSTNAAM-----ILSRPLGLD---PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS 94 G N AM I RP G++ P + + I+ + ++S +AG GF+N+ LS Sbjct: 45 GDYQCNNAMGLWSKIKGRP-GIEFRGPPAVGQAIMKNLPQSEMIESCSVAGPGFVNVVLS 103 Query: 95 PSYLRKILSSIVVSGIE-YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 +++ K + ++V GIE + L K + ++F S N MHVGH R ++GDTLAS+ Sbjct: 104 KNWMAKNIQKMLVDGIETWAPKLSIK--RAVVDFSSPNIAKEMHVGHLRSTIIGDTLASM 161 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS---DLPEGYYPGVYLKHVG 210 + FS EV R ++ D G Q L +F ++ N++ DL Y V Sbjct: 162 LEFSNVEVLRRNHVGDWGTQFGMLIEFLFEKFPNFEDVNETAIGDLQAFYKESKQRFDVD 221 Query: 211 KELADKYSSELLNFPE------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 E D+ ++ + W I +I R + + + + + E Sbjct: 222 AEFKDRAQKAVVRLQSGEQMYRKAWAQIC---------EISRREFDQVYQRLGVHLEEKG 272 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 +P I +I+ L QG V E SK +++F + G ++ + Sbjct: 273 ESFYNPY-IPGVIEALTNQGLVEE-------SKGA--------RVIF---IEGINIPLIV 313 Query: 325 LKSDGSYTYFAADLA--YFKCKYERGFDNMIYV---------------------MGSDHS 361 +KSDG Y Y + D+ +++ E+ + +IYV + +D Sbjct: 314 VKSDGGYNYASTDMTALWYRLTEEKA-EWIIYVTDVGQQQHFDMFFKAAKRAGWLPADDR 372 Query: 362 GYVKRLE-AVAAAVSEKKAQINVLLCELVRL--------YRDGMPIKMSKRAGDFI--TL 410 Y K + E + E+VRL R + +A ++ L Sbjct: 373 QYPKASHVGFGLVLGEDGKRFRTRSTEVVRLADLLDEAKTRSKAALIERGKAAEWTEEEL 432 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLD--FDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 + VG +V++ L KN+ L + FDF ++ K N Y+ YA+AR SI R++ Sbjct: 433 EQTAEAVGYGAVKYADL--KNNRLTNYTFDFDQML-NDKGNTAVYLLYAHARICSIIRKS 489 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 +L ++ ++ E L +HL ++ V+E A P L YLY+L Sbjct: 490 GKDTGELK---KTGKIVLDHAD----ERALGLHLLQFAEVVEEACTNLLPNVLCEYLYNL 542 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + + +S+ Q RL L A A ++ ++G++ Sbjct: 543 SENYTRFYSN---------CQVVGSAEETSRLLLCEATAVVMRKCFFLLGIK 585 >gi|261405352|ref|YP_003241593.1| arginyl-tRNA synthetase [Paenibacillus sp. Y412MC10] gi|261281815|gb|ACX63786.1| arginyl-tRNA synthetase [Paenibacillus sp. Y412MC10] Length = 620 Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 90/347 (25%), Positives = 150/347 (43%), Gaps = 47/347 (13%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87 I IE+P HG +TN AM L++ L PL IAELI A ++ D V S I G Sbjct: 31 IRIEQPASMEHGDYATNVAMQLAKVLRKAPLQIAELIQAELEQDASYKQLVRSTEIVAPG 90 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 F+NL + Y + + E K+ IE S NP H+GH R + +G Sbjct: 91 FMNLRIDWEYWASHQFELPPAANE----------KIVIEHTSINPNKSAHIGHLRNSCIG 140 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 DTL LM GYEV YI+D G Q+ + + + D Y Sbjct: 141 DTLVRLMRKLGYEVEVHNYIDDLGNQLADTVVGLLHTPLTKEHARFGDYCWDVYSSTNKA 200 Query: 208 HVGKELADKYSSELLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262 + + ++ +E+L+ EE W+ ++ + ++K +++K I++D+ + E Sbjct: 201 YEREPGLVQHRTEVLHALEEGNQNLSWIGLL---VAERIVKEHLEEMKQFGIEYDLLVWE 257 Query: 263 DDFHRGDPSPIRDIIDNLARQGY---VYEGILPPPKSKTTQKCDMDRKQLLFRS-TMVGD 318 ++ R+G+ +E + P + + +L +S T GD Sbjct: 258 ---------------SSIVREGFWASAFELLKNTPLFHQETEGKLAGCWVLKQSGTEAGD 302 Query: 319 D------VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + +D+ L++S+G TY A D+AY KY ++ +Y +D Sbjct: 303 EPESDHSIDKVLVRSNGILTYTAKDIAYHLWKYGVLSNDFVYKKFTD 349 Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust. Identities = 36/171 (21%), Positives = 77/171 (45%), Gaps = 19/171 (11%) Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD--IFPD 474 + + S+R+ +L + FD + E S N Y+ Y+YAR S+ +A++ + P Sbjct: 467 IATASIRYYLLRFALQTEVVFDLKQATEISG-NTGVYLLYSYARALSVLNKAREAEVTPS 525 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 + FP + +E L+ H++ + + +A P + + Y+L S+F+ Sbjct: 526 VPAR-FP--------AMEKAEHALLRHISTWYDTLYSAGRDLSPSAICNFTYELCSLFNN 576 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +S P L+ + ++ R+ L + + L ++G+ +P+ M Sbjct: 577 FYS---ACPILKAAE----EMLQFRVWLTSLFKNTLGEALEVLGLPTPSRM 620 >gi|239946914|ref|ZP_04698667.1| arginyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes scapularis] gi|239921190|gb|EER21214.1| arginyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes scapularis] Length = 126 Score = 90.9 bits (224), Expect = 6e-16, Method: Composition-based stats. Identities = 50/132 (37%), Positives = 81/132 (61%), Gaps = 13/132 (9%) Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS------ELQLIVHLAEYPRVIENAT 513 R SI +A+++ P+ ++ F + S++D S E+++I LA + + +E +T Sbjct: 2 RTISILSKARELMPE-SYNSF------EASKYDLSLLSSEEEIEIIKLLAAWTKTLEAST 54 Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573 EP+++AFYL +LAS FH W+ G+EN RFV +N++LT+ RL L A+ +I SG Sbjct: 55 KYFEPHRIAFYLINLASKFHSMWNFGKENSDYRFVIESNKELTLARLALASAIQKVIASG 114 Query: 574 LNIIGVESPNEM 585 L +IGVE N+M Sbjct: 115 LEVIGVEPMNKM 126 >gi|167376072|ref|XP_001733845.1| arginyl-tRNA synthetase [Entamoeba dispar SAW760] gi|165904864|gb|EDR29997.1| arginyl-tRNA synthetase, putative [Entamoeba dispar SAW760] Length = 573 Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 125/530 (23%), Positives = 227/530 (42%), Gaps = 99/530 (18%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIG 118 +P +A + +IK + + V + G F+N ++ S L K IL+ + ++G + +G Sbjct: 56 NPNIVASQLAEQIKPNDIISRVTVTGP-FLNFAINKSALTKMILNQVAEEKEKFGGSTLG 114 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 +G V +EF S N P H GH R ++G+ +A++ G+ V ++ D G+Q LA Sbjct: 115 EGQNVIVEFSSPNIAKPFHAGHLRSTIIGNFIANIHKLLGFNVISMNWLGDWGSQFGLLA 174 Query: 179 LSVFWRY--QQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSSELLNF------PEEKW 229 + F +Y ++ L N P + VY+K + K D ++ +F +E + Sbjct: 175 IG-FEKYGSEEELKRN----PIRHLYDVYVKINADKAKDDNVRAQGKDFFKHMEMGDEAY 229 Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 L K + A ++ ++ + LN+ DIF E + D + ++ +L +G Sbjct: 230 LVKWKLFRSLA-LEDLKKTYERLNVSFDIFTGESE---TDWELVDQVLKDLEAKGI---- 281 Query: 290 ILPPPKSKTTQKC---DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA-YFKCKY 345 SK + C D+++ +L L K DGS Y D+A K Sbjct: 282 ------SKMDKGCLIVDLEKYKLGI----------ALLKKDDGSTLYLTRDIASAIKRHN 325 Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405 F YV+ + + + K+L + + A+ C + GM + MS R G Sbjct: 326 TYSFSKCYYVVATQQTLHFKQLFKILELLGYSWAK----ECYHISF---GMVMGMSTRRG 378 Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSE-----------------------LLDFDFCKV 442 + L+ ++D+ + + M +KN E + DF+ ++ Sbjct: 379 TAVFLQDILDDAKATMLENM---QKNPEKISEIDENERETVADKIGVSAVFIQDFNAKRI 435 Query: 443 K--EQSKENPVF-------YVQYAYARCRSIFRQAKDIFP---DLDFDLFPRNVIPQESE 490 K E ++E Y+QYA+ARC + R++ P +++F L +E+E Sbjct: 436 KDYEYNRERMTSFEGYTGPYLQYAHARCCGVERKSGIEIPKASEVNFSLLTE----KEAE 491 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 LI+++A++ VI N EP L YL++L+ V +S R Sbjct: 492 ------NLIMNIAKFGDVIMNTYRNLEPNTLVSYLFELSHVIASAFSTLR 535 >gi|308487658|ref|XP_003106024.1| CRE-RARS-1 protein [Caenorhabditis remanei] gi|308254598|gb|EFO98550.1| CRE-RARS-1 protein [Caenorhabditis remanei] Length = 711 Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 138/595 (23%), Positives = 247/595 (41%), Gaps = 96/595 (16%) Query: 43 GHLSTNAAMILSRPLGLD-----PLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPS 96 G +AM ++ L ++ P + + I A++ + D ++ + + GFIN++L Sbjct: 161 GDYQCTSAMPIAAKLKINGINKKPADVGKEINAKLPKNIDFIEKIIVMPAGFINIFLKTD 220 Query: 97 YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 Y+R +S + GI + + K +V ++F S N MHVGH R ++GD++ L Sbjct: 221 YIRSQVSLLASKGISLPK--VAK-KRVLVDFSSPNIAKEMHVGHLRSTIIGDSICRLFES 277 Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216 G++V R +I D G Q L ++ R+ L + LP+ + K K + Sbjct: 278 VGFDVLRVNHIGDWGTQFGMLIAHLYDRFPDFL----NKLPDISDLQAFYKESKKRFDED 333 Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276 S F + + +VK S D +KA N D+ + + D Sbjct: 334 ES-----FKKRAYECVVKLQSHDG------DIVKAWNTICDVSKKYNQI-------VYDY 375 Query: 277 IDNLAR---QGYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMVGDDVDRPLLKSDG 329 +D + + + + ++ K K DM D +Q++F S G DV ++KSDG Sbjct: 376 LDIKIKDVGESFYQDKMVDLVKWIKQNKPDMLREEDGRQIMFPS---GCDVPLTVVKSDG 432 Query: 330 SYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYV-----------------KRLEAV- 370 +TY +DLA K + E D IYV+ + S ++ +R+E V Sbjct: 433 GFTYDTSDLAALKYRMLEEKVDWNIYVVDAGQSLHLETVYAAGRDFGWYDESKQRVEHVG 492 Query: 371 -AAAVSEKKAQINVLLCELVRLY--------RDGMPIKMSKRAGDFI--TLRHVVDEVGS 419 + + K + E VRL R +K KR L D V Sbjct: 493 FGLVLGDDKKKFKTRSGETVRLLDLLSEGVKRATEKLKEKKREAVMTEEELTTARDAVAF 552 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 V++ L ++ F F ++ + + N Y+ YAYAR RSI R + D Sbjct: 553 GCVKYADLSHTRTQDYVFSFDRMLD-DRGNTAVYLLYAYARIRSIVRTSG--VNDTQLAE 609 Query: 480 FPRN--VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 + N V+P + + ++ L++ ++ ++ + +++ Y+Y LA++FH ++ Sbjct: 610 YVSNTPVLPLNHPAELKLAKHLLKLSDCILLVLDSLML---HQVCDYVYQLATLFHDFYN 666 Query: 538 H-------GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G E P + F RL L A++I++ I+G+ +M Sbjct: 667 ECYVIEKKGDEPPVVHF----------HRLALCEVTANVISTCFKILGIREVPKM 711 >gi|297625461|ref|YP_003687224.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) (ArgRS) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921226|emb|CBL55776.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) (ArgRS) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 544 Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 138/573 (24%), Positives = 232/573 (40%), Gaps = 89/573 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH +N A+ L++ G P +A+ IV ++ + + V IAG GF+N L +L Sbjct: 31 GHFQSNVALRLAKQQGKPPRQVAQEIVDKLDVGDLCEPVEIAGPGFLNFRLRAD----VL 86 Query: 103 SSIVVSGIEYGRNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 + V + R I V I++ + N MHVGH R ++GD ++ G+ Sbjct: 87 AGAVTDQLHDPRAGITPTELPQTVVIDYSAPNAAKQMHVGHLRSTIIGDCFNRVLRAKGH 146 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 V + +I D G Q L +QAL + DL G +EL + ++ Sbjct: 147 TVIAQNHIGDWGRQFGML-------IEQAL-DEKLDLDSLDLAGA------EELYKRANA 192 Query: 220 ELLN---FPEEKWLPIVK----DYSVQAMMKIIRDDLKA----LNIQHDIFISEDDFHRG 268 L + F + +VK D +AM + + D KA + + +++ D+ G Sbjct: 193 HLKSDDAFADRARERVVKLQNGDADTRAMWRKMIDLSKAGFNKTYARMGVLLTDADY-AG 251 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 + +Y +LP Q+ Q + G D L S Sbjct: 252 ES---------------MYNEMLPQVCDDLEQRGIAKLDQGALVVFVKGFDAPAILRNSQ 296 Query: 329 GSYTYFAADLAYFKCKYERGFDN-MIYVMGSDHSGYVKRLEAVA-------AAVSEKKAQ 380 G Y Y D+A + + + N +IYV+GS+ + + + AV A VS + Sbjct: 297 GGYGYDVTDVAAVRYRVDDLEANRLIYVVGSEQTYHFNLIFAVCREAGYLPAWVSAQHVG 356 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR------KNSEL 434 ++L DG K S R G + L ++DE + + L NS Sbjct: 357 YGMVLGP------DGK--KFSTREGTAVHLNDLLDEAEEHAAPEIALAAIKYADLSNSLQ 408 Query: 435 LDFDFCKVK-EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493 D+ F V+ Q+ + Y+QYA+AR I R+A D + + I E Sbjct: 409 KDYVFDPVRMTQTTGDTGPYLQYAHARVSQILRKA-------DAEGLSGDTISVLDEVPE 461 Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN-PRLRFVQANN 552 EL L L + ++ P+KL YLY+LA+ + + EN P L+ ++ Sbjct: 462 QELAL--WLTRFGDAVDEVADELTPHKLCTYLYELATKYSTFY----ENCPVLK----SD 511 Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL L ++ +GL+++G+ +P M Sbjct: 512 GDVRTSRLALCATTKRVLATGLDLLGIAAPERM 544 >gi|119773583|ref|YP_926323.1| arginyl-tRNA synthetase [Shewanella amazonensis SB2B] gi|166232838|sp|A1S2P7|SYR_SHEAM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|119766083|gb|ABL98653.1| arginyl-tRNA synthetase [Shewanella amazonensis SB2B] Length = 581 Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 53/169 (31%), Positives = 88/169 (52%), Gaps = 2/169 (1%) Query: 9 SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68 S L+ L+ + + V RI ++R +D +HG L+TN AM+L++ G P +A+LI Sbjct: 7 SLLEQTLESLKAQGIVPADFEARIQVDRTKDKSHGDLATNLAMMLTKVAGKPPREMAQLI 66 Query: 69 VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128 + + V V IAG GFIN ++ + L L + + + G T V +++ Sbjct: 67 IDNLPASAQVAKVEIAGPGFINFFIDDNALANQLKAALGDAM-LGVKAAAPQTVV-VDYS 124 Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 S N MHVGH R ++GD++ + F G++V R+ ++ D G Q L Sbjct: 125 SPNLAKEMHVGHLRSTIIGDSVVRALEFLGHKVIRQNHVGDWGTQFGML 173 Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 17/180 (9%) Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 D ++ + VG SV++ L + S F F ++ + N Y+ YAY R IF Sbjct: 419 DETEVKEIARVVGIASVKYADLSKNRSSDYIFSFEQML-SFEGNTAPYLLYAYTRVAGIF 477 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 ++A++I DL ++ + E +L LA++ ++ +P+ L YL Sbjct: 478 KKAENI------DLTNAELVLDHDK----EKELGNKLAQFGEILARMVDKGQPHILCGYL 527 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 Y+LA F + P L A++ RL L A + GL+++G+E+ M Sbjct: 528 YELAGAFSSFY---EACPVL---SADSETARDSRLLLSRLTADTLKQGLSLLGIETLERM 581 >gi|149280422|ref|ZP_01886542.1| arginyl-tRNA synthetase [Pedobacter sp. BAL39] gi|149228836|gb|EDM34235.1| arginyl-tRNA synthetase [Pedobacter sp. BAL39] Length = 591 Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 138/577 (23%), Positives = 235/577 (40%), Gaps = 128/577 (22%) Query: 80 SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139 + F KGF+NL + Y + ++ ++S YG G KV +E+ S N P+H+G Sbjct: 72 TAFNVVKGFLNLSIDHEYWLNLFNTKLLSP-HYG-TFPSNGRKVMVEYSSPNTNKPLHLG 129 Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS----- 194 H R ++G ++A L+ SG EV + +ND G I L+ W Q N ++ Sbjct: 130 HVRNNLLGYSVAELLKASGSEVFKVNLVNDRGIHICKSMLA--W---QNWGNGETPASSG 184 Query: 195 ---DLPEGYYPGVYLKHVGKEL----ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247 D G Y ++ K KE+ AD + E +K P++K + QAM+ Sbjct: 185 LKGDHLVGKYYVIFDKEYKKEIDALKADGQTEE----EAKKNAPLIK--AAQAMLLA--- 235 Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR- 306 + GD + I D+ + G+VY+G K+ D D+ Sbjct: 236 -----------------WETGDTAVI-DLWKMM--NGWVYDGFEVTYKN---LGVDFDKY 272 Query: 307 -------------------KQLLFRS-------TMVGDDVDRPL-LKSDGSYTYFAADLA 339 K + F+ + D +D+ L L++DG+ Y DL Sbjct: 273 YYESNTYLLGKDSVEEGLAKGVFFKKPDGSVWIDLTEDGLDQKLVLRADGTSVYITQDLG 332 Query: 340 YFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 + KY+ D IYV+G++ + K L + + + A+ L L D Sbjct: 333 TAQMKYDDFNMDESIYVVGNEQDYHFKVLFLILDKLGKSWAKG---LYHLSYGMVDLPSG 389 Query: 399 KMSKRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWR 429 KM R G + ++ E +G ++++ +L Sbjct: 390 KMKSREGTVVDADDLIAEMVATAKEKTEALGKVDHFSEEEKSTLYYNIGMGALKYFLLKV 449 Query: 430 KNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488 + + L FD + + Q P ++QY +AR +S+ +A FD R+ E Sbjct: 450 EPKKRLLFDPSESIDFQGNTGP--FIQYTHARIKSLLTKAGHTVGIQGFD---RHFALTE 504 Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548 +E D +I+ L ++P I A A P LA Y+Y++A +F+ + E P + + Sbjct: 505 TELD-----MIILLDKFPAEITAAAAAFSPATLANYVYEVAKLFNKFY---HEVPPI--I 554 Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +L RL L A +I SG+ I+G+E P M Sbjct: 555 KEEDAQLQHYRLNLSWVTAHVIKSGMRILGIEVPERM 591 >gi|160891544|ref|ZP_02072547.1| hypothetical protein BACUNI_03996 [Bacteroides uniformis ATCC 8492] gi|156858951|gb|EDO52382.1| hypothetical protein BACUNI_03996 [Bacteroides uniformis ATCC 8492] Length = 605 Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 141/630 (22%), Positives = 261/630 (41%), Gaps = 126/630 (20%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 ++ +++ + GHL+ L R P A+ I ++ + + F KGF+N Sbjct: 27 QVQLQKTKKEFEGHLTLVVFPFL-RMSKKGPEQTAQEIGEYLQANEPSVAAFNVIKGFLN 85 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDT 149 L ++ S ++L+ I +YG + V IE+ S N P+H+GH R ++G+ Sbjct: 86 LTIASSAWIELLNGIHADK-QYGIVAATDNSPLVMIEYSSPNTNKPLHLGHVRNNLLGNA 144 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE----------G 199 LA+++A +G +V + +ND G I L+ W+ Y N + PE G Sbjct: 145 LANIVAANGNKVVKTNIVNDRGIHICKSMLA--WQK----YGN-GETPESSGKKGDHLIG 197 Query: 200 YYPGVYLKHVG---KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD--------- 247 Y + KH KEL K+ SE +N E K K + +MK R+ Sbjct: 198 DYYVSFDKHYKAEVKELMAKFQSEGMNEEEAK----AKAETESPLMKEAREMLVKWEAND 253 Query: 248 -DLKAL--NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-EGILPPPKSKTTQKCD 303 +++AL + ++ D+ +R + D + + Y EG K K + + Sbjct: 254 PEVRALWKKMNDWVYAGFDETYR----MMGVTFDKIYYESNTYLEG-----KEKVMEGLE 304 Query: 304 MDRKQLLFR-------STMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354 K +R + + G+ +D + LL++DG+ Y D+ K ++ + D MIY Sbjct: 305 ---KGFFYRKEDGSVWADLTGEGLDHKLLLRADGTSVYMTQDIGTAKLRFADYPIDKMIY 361 Query: 355 VMGSDHS--------------------------GYVKRLEAVAAAVSEKKAQINVLLCEL 388 V+G++ + G V+ E + + L+ E+ Sbjct: 362 VVGNEQNYHFQVLSILLDKLGFEWGKGLVHFSYGMVELPEGKMKSREGTVVDADDLMAEM 421 Query: 389 VRLYRD-----GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML---WRKN-----SELL 435 + ++ G ++K D ++ VG ++++ +L RKN E + Sbjct: 422 IDTAKETSNELGKLDGLTKEEAD-----NIARIVGLGALKYFILKVDARKNMTFNPKESI 476 Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495 DF+ N ++QY YAR +S+ R+AK+ ++ L P E E Sbjct: 477 DFN---------GNTGPFIQYTYARIQSVLRKAKEAGIEIPAQL------PAGIELSEKE 521 Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555 LI +A++ +++ A P +A Y YDL ++ + ++ N + Sbjct: 522 EGLIQMVADFAAIVKQAGEDYSPSIIANYTYDLVKEYNQFYHD------FSILREENEAV 575 Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL L VA ++ G+ ++G+E P+ M Sbjct: 576 KVFRLALSENVAKVVRLGMGLLGIEVPDRM 605 >gi|163815005|ref|ZP_02206392.1| hypothetical protein COPEUT_01159 [Coprococcus eutactus ATCC 27759] gi|158449688|gb|EDP26683.1| hypothetical protein COPEUT_01159 [Coprococcus eutactus ATCC 27759] Length = 563 Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 123/566 (21%), Positives = 238/566 (42%), Gaps = 78/566 (13%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112 L++ + P IA I +I ++ + +AG ++N Y+ K + + + + Sbjct: 43 LAKIMRKAPNMIAADIKEQIGDVDFIEKIDVAG-AYLNFYIKKDIFVKTMIE-AANSVNF 100 Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172 G + +G G + I++ S N HVGH R ++G++L + + GY+V R ++ D G Sbjct: 101 GCSDLGDGQTICIDYSSPNVAKNFHVGHLRTTIIGNSLYKIYSKLGYKVVRINHLGDWGT 160 Query: 173 QINTLALSV-FWRYQQALYNND-SDLPEGYYPGVYLKHVGKELADK---YSSELLNFPEE 227 Q L ++ W ++A+ + ++L + Y EL D+ + +++ N EE Sbjct: 161 QFGKLIVAYKAWGTKEAVEKDGIAELMKLYVKFHEEADKNPELVDEARAWFNKMENGDEE 220 Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287 L I + + ++++ R L + D ++ E F+R + ++D + G + Sbjct: 221 A-LSIWQWFKDISLVEYKRT-YNLLGMDFDYYLGES-FYR---DKCQAVVDKVKAAGLLK 274 Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA-YFKCKYE 346 E + D D + + K DGS Y DLA F K Sbjct: 275 ES----EGAMIVDLSDYDMAPCI-------------ITKKDGSSIYATRDLAAIFYRKDT 317 Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406 F +YV G + + ++ V + + A+ ++ + +G K+S R+G+ Sbjct: 318 YNFSKCLYVTGQEQKLHFAQVFKVVELLGNEWAKDQLVHIPYGLVSLEGA--KLSTRSGN 375 Query: 407 FI-------------------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441 I V +VG +V F L+ + + + F + K Sbjct: 376 IIYAEDILKDAIAKSLEIITEKSPNLPNKEDVAKKVGVGAVLFNDLYNQRIKDVSFSWNK 435 Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAK--DIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 V E YVQY +ARC S+ R + D +++DL + Q++ ++L+ Sbjct: 436 VLNFDGETGP-YVQYTHARCCSVVRMDENFDSSAPVNYDL----ITEQDA------IELL 484 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 + +P VI++A EP +A + D+A F+ ++ R + ++R L R Sbjct: 485 KEINRFPAVIKDAADKYEPSIVARFAVDVAQAFNKFYNSTR-------INVDDRDLKNAR 537 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 + L + + I LN++G+E+P M Sbjct: 538 VMLTYLTKNTIAEALNLLGIEAPEAM 563 >gi|288929012|ref|ZP_06422858.1| tRNA ligase [Prevotella sp. oral taxon 317 str. F0108] gi|288329996|gb|EFC68581.1| tRNA ligase [Prevotella sp. oral taxon 317 str. F0108] Length = 605 Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 123/564 (21%), Positives = 236/564 (41%), Gaps = 103/564 (18%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCA 144 KGF+NL ++P+ +L+ I S +G + + + V +E+ S N P+H+GH R Sbjct: 81 KGFLNLTIAPAAWISLLNRID-SEPRFGEKAVNEQSPLVMVEYSSPNTNKPLHLGHVRNN 139 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG----- 199 ++G +LA +M +G V + +ND G I L+ W+ +S +G Sbjct: 140 LLGWSLAQIMEANGNRVVKTNIVNDRGIHICKSMLA--WKKWGNGATPESTGKKGDHLIG 197 Query: 200 -YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 YY + +H ELA+ + + + + K ++D + HD+ Sbjct: 198 DYYVA-FDQHYRAELAELTAKFR-----------AEGMAAEEAEKRAKEDSPLMKEAHDM 245 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEG--------------ILPPPKSKTTQKCDM 304 + + +GD +R + + +VY+G I ++ K + Sbjct: 246 LVR---WEQGDEE-VRALWKKM--NDWVYQGFDETYKAMGVGFDKIYYESETYLEGKAKV 299 Query: 305 DR---KQLLFR-------STMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKY-ERGFDNM 352 + K+L FR + + + +D+ LL ++DG+ Y D+ ++ + D M Sbjct: 300 EEGLAKELFFRKPDGSVWADLSDEGLDQKLLLRADGTSVYMTQDIGTAALRFKDYPIDKM 359 Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI---KMSKRAGDFIT 409 IYV+G++ + + + L + + K + ELV + + KM R G + Sbjct: 360 IYVVGNEQNYHFQVLSILLDRLGFKWGK------ELVHFSYGMVELPNGKMKSREGTVVD 413 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLD--------------FDFCKVKEQSKENPVF--- 452 +++E+ S + R K +++ + + +K +++N +F Sbjct: 414 ADELMEEMVSAARRTSEELGKFADMTENERNEIARIVGMGALKYFILKVDARKNMLFNPE 473 Query: 453 -----------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501 ++QY YAR RSI R+A + + + P +V+P + E+QLI Sbjct: 474 ESIDFNGNTGPFIQYTYARIRSIMRKA-----EAEGIVLP-SVLPDTLPLNEKEVQLIQK 527 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 L + V+E A P +A Y Y+L F+ + + A + + +RL Sbjct: 528 LNSFETVVEQAGKDYSPSGIANYCYELTKDFNQFYHD------YSILNAESAEAKTLRLA 581 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 L VA I +G+ ++G+E P M Sbjct: 582 LAKNVAKTIKNGMQLLGIEVPERM 605 >gi|225181879|ref|ZP_03735314.1| arginyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1] gi|225167393|gb|EEG76209.1| arginyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1] Length = 564 Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 141/577 (24%), Positives = 244/577 (42%), Gaps = 101/577 (17%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE- 111 L++ L P IA + ++ D V G +IN + RK+L+ + + ++ Sbjct: 45 LAKELRNAPPKIAAELAEKLPASELFDRVEARGP-YINFFCD----RKMLAQLTLDEVQT 99 Query: 112 ----YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167 +G+ G G V I+F + N P VGH R V+G++L + GY+ ++ Sbjct: 100 EREKFGQRKSGSGQTVVIDFSAPNIAKPFGVGHLRSTVIGNSLYRIHEALGYKSVGINHL 159 Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP-- 225 D G Q L ++ + +D+ L E P YL EL ++ E P Sbjct: 160 GDWGTQFGKLIVAYL------KWGDDTRLEED--PITYLY----ELYVRFHREAEEKPAL 207 Query: 226 -EEK--WLPIVKDYSVQA--MMKIIRD-DLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279 EE W ++D QA + + RD L ++I D ++G+ S +++D+ Sbjct: 208 DEEARAWFKKLEDGDEQARQLWQRFRDLSLAEFKRIYNILGVHFDSYQGE-SYYNEMLDD 266 Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAA 336 R+ +T ++ L+ +D + P L K DG+ Y Sbjct: 267 TVRE------------VETKGLTEVSEGALIVNL----EDSNMPPCLLRKQDGATLYATR 310 Query: 337 DLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRD 394 DL +++ F M+YV+G+D + + +++ AV + + A+ + L+R +++ Sbjct: 311 DLCAAIYRHQMHDFSKMLYVVGADQALHFQQVFAVLKKLGYEWAENCTHVPFGLIR-FKE 369 Query: 395 GMPIKMSKRAGDFITLRHVVD-------------------------EVGSDSVRFMMLWR 429 G KMS R G I L V++ +VG +V F L Sbjct: 370 G---KMSTRQGTLIFLEDVLNRATELAHQIIQEKNPQLENKYEVAKKVGIGAVIFGDLSN 426 Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489 + ++FD+ KV + S E Y+QY++AR SI R+A D L Sbjct: 427 DRVKNIEFDWDKVLDFSGETAP-YIQYSHARICSILRKAAAWPAPFDATLLV-------- 477 Query: 490 EFDTSELQLIV-HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548 + E QL++ +A + I A +P LA YL DLA+ F+ + + P L Sbjct: 478 ---SDEEQLVLGTIARFSDAIARAADTLKPSVLARYLLDLAAAFNRFY---HQCPVLN-- 529 Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL L+ AV ++ +GL ++G+E+P EM Sbjct: 530 --AEDDIRNARLALIDAVRQVLVNGLYLLGIEAPEEM 564 >gi|203288032|ref|YP_002223047.1| arginyl-tRNA synthetase [Borrelia recurrentis A1] gi|238690575|sp|B5RPU2|SYR_BORRA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|201085252|gb|ACH94826.1| arginyl-tRNA synthetase [Borrelia recurrentis A1] Length = 585 Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 142/623 (22%), Positives = 257/623 (41%), Gaps = 98/623 (15%) Query: 5 ADFSSRLKNYLKEI--DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 AD ++++ +KE+ IK++K IV+++P G LS S+ L L Sbjct: 7 ADLENKIQKTIKELALSSNIKLDKI---NIVMQKPPKSEMGDLSI-LIFEFSKILKLSIP 62 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGT 121 I + I+ +I + S+ ++N+ + Y++ + + YG N + Sbjct: 63 VITQEIIKQIGNEYKTKSM----GPYLNIKFNRKEYIQNTIKKVNKEKENYGANNSLQNK 118 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLAL 179 K IEF S N P+HVGH R ++G++L+ ++ SG +VT+ IND G I + LA Sbjct: 119 KTIIEFSSPNTNKPLHVGHLRNDIIGESLSRILKASGSKVTKINLINDRGTHICKSMLAY 178 Query: 180 SVFWRY---QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236 F + A D + + Y E+A+ +LL E+ + Sbjct: 179 KKFGNNITPEIAQKKGDHLIGDFYVKYNEYASQNSEIAENEIQQLLYQWEQG-----DEK 233 Query: 237 SVQAMMKI-------IRDDLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288 +VQ K+ I++ NI D I++ + F G R+++ N ++G Y+ Sbjct: 234 TVQLWTKLNKWAIDGIKETYNTTNITFDKIYLESEIFKIG-----REVVINGLKEGLCYK 288 Query: 289 ----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC- 343 I ++T + + KQ + LL+++G+ Y DL Sbjct: 289 REDGAICINIPTETNNIDNQNFKQ-------------KVLLRANGTSIYLTQDLGNIVAR 335 Query: 344 KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403 K E FD MIYV+GS+ + K L VA + + L + +G KM R Sbjct: 336 KNEFDFDEMIYVVGSEQIHHFKTLFYVADKLGITNENNLIHLSYGMVNLPEG---KMKSR 392 Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELL-----------------------DFDFC 440 G+ I +++ ++ ++ + +N + L D F Sbjct: 393 EGNIIDADNLIHDLSQSTMLELKKRYENEQNLQKLALNISLGAIHYYLLKTAIHKDILFN 452 Query: 441 KVKEQS-KENPVFYVQYAYARCRSIFRQAKDI-FP--DLDFDLFPRNVIPQESEFDTSEL 496 K + S N Y+QY AR SI + ++ P + +FDL + +E Sbjct: 453 KTESLSFTGNSGPYIQYVGARINSILDKYNNLNLPNKNTNFDLL----------INENEW 502 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 ++I ++E+ I A+ + P +A Y Y LA F ++ + + +N +LT Sbjct: 503 EIIKIISEFEEYIIKASKDRNPSIIANYSYLLAKNFSTYYQD------TKIIDKDNLELT 556 Query: 557 MMRLQLVHAVASIINSGLNIIGV 579 R+ L AV I + ++++ + Sbjct: 557 HARIDLAKAVLQTIKNCMHLLNI 579 >gi|325955141|ref|YP_004238801.1| Arginyl-tRNA synthetase [Weeksella virosa DSM 16922] gi|323437759|gb|ADX68223.1| Arginyl-tRNA synthetase [Weeksella virosa DSM 16922] Length = 590 Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 138/588 (23%), Positives = 239/588 (40%), Gaps = 125/588 (21%) Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK- 122 I E ++A+ KI + + KGF+N+ L PS + LS + YG + +K Sbjct: 62 IGEHLLAQKKI-----ASYNVVKGFLNIELLPSTIVSYLSE-NAQNVSYGLQFPTEKSKT 115 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALS 180 V +E+ S N P+H+GH R ++G ++A ++A SG + + IND G I + LA Sbjct: 116 VMVEYSSPNTNKPLHLGHVRNNLLGYSVAEIIAASGANIVKTQIINDRGIHICKSMLAWE 175 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 F + + PE K G L KY E ++ + +K+ Sbjct: 176 KF---------GNGETPESS------KIKGDHLVGKYYVEF----DKHYRDEIKELVANG 216 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHR----GDPSPIRDIIDNLARQGYVYEGILPPPKS 296 M + + + IFI + R DP +R + + + +VY+G + Sbjct: 217 M------EEEEAKKKAPIFIEAQEMLRKWEANDPE-VRALWEKM--NNWVYDGF-----A 262 Query: 297 KTTQKCDMDRKQLLFRST--MVGDDV----------------------------DRPLLK 326 KT Q+ +D + L+ S ++G D+ ++ +L+ Sbjct: 263 KTYQRLGVDFDEYLYESDTYILGKDLVEEGLRNGVFYRKQDGSVWIDLTEDGLDEKLVLR 322 Query: 327 SDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 +DG+ Y DL +++ R D++IYV+G++ + K L + + A+ L Sbjct: 323 ADGTSVYITQDLGTAVERFKHRELDDLIYVVGNEQDYHFKVLFLILQKLGYSWAET---L 379 Query: 386 CELVRLYRDGMPIKMSKRAGDFI-----------TLRHVVDEVG-----SDSVRFMMLWR 429 L D KM R G + T + + E+G +D+ + + Sbjct: 380 QHLSYGMVDLPEGKMKSREGTVVDADDLMQEIYETAKEIAQELGKLEGYTDAEKESLYEI 439 Query: 430 KNSELLDFDFCKVKEQS------KENPVF------YVQYAYARCRSIFRQAKDIFPDLDF 477 L + KV + KE+ F +VQYAYAR +S+ R K+ D+D+ Sbjct: 440 IAMGALKYFILKVDPKKRILFDPKESVDFNGNTGPFVQYAYARIQSLLR--KESPKDMDW 497 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 I +E LI L+++ I+ A P +A Y YDL +++ + Sbjct: 498 STIKLQGIEKE---------LIRLLSDFGETIQKAAEELSPAIIANYTYDLVKLYNSFYQ 548 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P L+ N RL L V + I SGL ++G++ P M Sbjct: 549 N---TPILK---TENETEKHFRLMLSLWVGNTIASGLKLLGIQVPERM 590 >gi|262170936|ref|ZP_06038614.1| arginyl-tRNA synthetase [Vibrio mimicus MB-451] gi|261892012|gb|EEY37998.1| arginyl-tRNA synthetase [Vibrio mimicus MB-451] Length = 577 Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 127/612 (20%), Positives = 233/612 (38%), Gaps = 120/612 (19%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ LG +P A+ ++ + ++ IAG GFIN++ Sbjct: 27 LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLEGIASKTEIAGPGFINIF 86 Query: 93 LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 LS +L + + G+ E + ++ ++ + N MHVGH R ++G Sbjct: 87 LSEEFLAAQAEAALADERLGVAQEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIG 139 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188 D + + F G+ V R +I D G Q L L F+R + Sbjct: 140 DAVVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQKESGEISMELSDLEAFYRESKK 199 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245 LY+ D E A Y +L F E W +V +Q Sbjct: 200 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYD 245 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 R + +++ + + E ++ D P+ I+ +L +G E D Sbjct: 246 RLN---VSLTRENVMGESMYN--DMLPL--IVSDLKAKGLAVED---------------D 283 Query: 306 RKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361 Q++F G+ + + K DG + Y D+A K +YE G D ++Y + S Sbjct: 284 GAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQH 343 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416 ++ + + Q+++ + L +DG P K RAG + L ++DE Sbjct: 344 QHLMQAWTIVRKAGYIPEQVSLEHHAFGMMLGKDGRPFKT--RAGGTVRLADLLDEAEER 401 Query: 417 -----------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453 V +V++ L + + FD+ + + N Y Sbjct: 402 AKALIESKNPDLSADEKAKIANTVAMAAVKYADLSKHRTTDYVFDWDNML-AFEGNTAPY 460 Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513 +QYAY R S+F +A +D + ++ E + E LI L ++ +++ Sbjct: 461 MQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQFEEAVQSVA 511 Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573 +P+ + YL++LA +F + + A + RL+L A I G Sbjct: 512 REGQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESVKQSRLKLAALTAKTIKQG 565 Query: 574 LNIIGVESPNEM 585 L ++G+E+ M Sbjct: 566 LALLGIETLERM 577 >gi|325662130|ref|ZP_08150748.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA] gi|331085927|ref|ZP_08335010.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA] gi|325471579|gb|EGC74799.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA] gi|330406850|gb|EGG86355.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA] Length = 588 Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 131/601 (21%), Positives = 240/601 (39%), Gaps = 96/601 (15%) Query: 36 RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95 RP C + N AM ++ P+ IA +V +++ + GFINL L Sbjct: 33 RPDLCEY---QCNGAMAGAKTYRKAPIMIANDVVEKLQESTCIQEAEAVAPGFINLKLDR 89 Query: 96 SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155 +L L+ + G + + +++ AN P+HVGH R A++G+++ + Sbjct: 90 EFLAGYLNQMSEDA-HLGFETAKEPKTIIVDYGGANVAKPLHVGHLRSAIIGESIKRIGK 148 Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK---- 211 F+G+ V + ++ D G Q+ + + R + Y +++ G YP +G+ Sbjct: 149 FAGHHVIGDVHLGDWGYQMGLVITELKKRKPELPYFDEN--FAGEYPEEAPFTIGELEEI 206 Query: 212 -ELADKYSSELLNFPEEKWLPIV------KDYSV--QAMMKIIRDDLKA----LNIQHDI 258 A Y+ E ++ EE + Y + +M + DLK LN+ D+ Sbjct: 207 YPTASAYAKEHEDYKEEALQATFLLQNGHRGYRAVWKHIMNVSVADLKKNYGNLNVDFDL 266 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + E D P D+++ + ++GY + +D L+ D Sbjct: 267 WKGEADAQEYIP----DMVEYMKKEGYAH----------------IDNGALVVDVKEETD 306 Query: 319 DVDRP---LLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSD---HSGYVKRLEAV 370 + P +LKSDG+ Y DLA + E+ + D +IYV+ H V R Sbjct: 307 TKEIPPCMILKSDGAALYDTTDLATL-IEREKLYQPDEVIYVVDKRQELHFVQVFRCARK 365 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430 V+EK V + +DG P K R G + L +++ E+ + + + R Sbjct: 366 TKIVNEKTDLQFVGFGTMNG--KDGKPFKT--RDGGVMRLENLIREINEEMYKKITDNRT 421 Query: 431 NSE-----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRSIF 465 SE L + + Q+ ++ VF Y+ Y R +SI Sbjct: 422 VSEEEARKTAQIVGLSAIKYGDLSNQASKDYVFDVDRFTSFEGNTGPYILYTIVRIKSIL 481 Query: 466 -RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R A+ D L S SE L++ A++ VIEN P+K+ Y Sbjct: 482 ARYAEMEGSKTDVKLL--------SACSDSEKALMLEAAKFNSVIENTLEELAPHKICAY 533 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 +YDLA+ F+ + + + +++ + L+ ++ + ++++G E+P Sbjct: 534 IYDLANTFNRFYH------ETKILAEEDKERQASFIALLTVTKKVLETCIDLLGFEAPER 587 Query: 585 M 585 M Sbjct: 588 M 588 >gi|322697634|gb|EFY89412.1| arginyl-tRNA synthetase [Metarhizium acridum CQMa 102] Length = 633 Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 119/516 (23%), Positives = 214/516 (41%), Gaps = 83/516 (16%) Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167 +G+ +NL ++ +EF S N P H GH R ++G +A+L +G++V R Y+ Sbjct: 145 NGLRDPKNLSSGKKRIIVEFSSPNVAKPFHAGHLRSTIIGSFIANLYEANGWDVVRMNYL 204 Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL----------------KHVGK 211 D G Q LALS + N + P + +Y+ K GK Sbjct: 205 GDWGKQYGLLALSYERNGNEEELNKN---PIDHLFKLYVQINAEMSAEKEAIEEQKKEGK 261 Query: 212 ELADKYSSELLNFPEEKWLPIV-KDYSVQAMMKIIRD--------DLKALNIQHDIFISE 262 +++ ++ L + + + +D +V + + RD LNIQ D F E Sbjct: 262 DVSALEANSLDEQARQYFRRMTDRDEAVLSQWQQFRDLSIARYKETYSRLNIQFDEFSGE 321 Query: 263 DDFHRGDPSPIRDIID--NLARQ--GYV---YEGILPPPKSKTTQKCDMDRKQLLFRSTM 315 S I D + N++R+ G V + +LP + K Sbjct: 322 SQVSEESMSKIADEMKEKNISREDKGAVLVDFTQLLPGKEGKR----------------- 364 Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAA- 373 +G V L K DG+ Y D+ ++E+ FD+MIYV+ S ++K+L + Sbjct: 365 LGTTV---LRKRDGTALYLTRDVCELLGRHEKYNFDHMIYVVASQQDLHLKQLFQIIELL 421 Query: 374 ----VSEKKAQIN--VLLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRF 424 +++K IN ++L ++++ D M M K + + D +G SV Sbjct: 422 GYKDIAKKCQHINFGLVLDDILKDCADHMHETMKKNEEKYAQVEDPDATADTLGISSVMV 481 Query: 425 MMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + K F+ + + P Y+QYA+AR SI R+A D D D + Sbjct: 482 QDMSGKRINNYTFNMEAMTSFEGDTGP--YLQYAHARLCSIKRRAN--LTDEDLDSANLS 537 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ ++ + ++ L+++P V++N EP + YL+ + V + H + Sbjct: 538 LLKEDHAVN-----IVRMLSQWPDVLQNTLKTLEPTTVLTYLFKMTHVISSSYDHLQ--- 589 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 V + R+L R+ L A + +G+ I+G+ Sbjct: 590 ----VVGSERELMKARMALYDAARITLANGMRILGL 621 >gi|262404425|ref|ZP_06080980.1| arginyl-tRNA synthetase [Vibrio sp. RC586] gi|262349457|gb|EEY98595.1| arginyl-tRNA synthetase [Vibrio sp. RC586] Length = 597 Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 129/613 (21%), Positives = 232/613 (37%), Gaps = 122/613 (19%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ LG +P A+ ++ + ++ IAG GFIN++ Sbjct: 47 LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLEGIASKTEIAGPGFINIF 106 Query: 93 LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 LS +L + + G+ E + ++ ++ + N MHVGH R ++G Sbjct: 107 LSEEFLAAQAEAALADERLGVAQEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIG 159 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQA 188 D + + F G+ V R +I D G Q L L F+R + Sbjct: 160 DAVVRTLEFLGHNVIRANHIGDWGTQFGMLIANLERVQKESGEISMELSDLEAFYRESKK 219 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKII 245 LY+ D E A Y +L F E W +V +Q Sbjct: 220 LYDEDEQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQNQRNYD 265 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 R + +++ + + E ++ D P+ I+ +L +G E D Sbjct: 266 RLN---VSLTRENVMGESMYN--DMLPL--IVSDLKAKGLAVED---------------D 303 Query: 306 RKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS 361 Q++F G+ + + K DG + Y D+A K +YE G D ++Y + S Sbjct: 304 GAQVVFLDEFQNKDGEPMGVIVQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQH 363 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 ++ + + Q+++ + L +DG P K RAG + L ++DE ++ Sbjct: 364 QHLMQAWTIVRKAGYIPEQVSLEHHAFGMMLGKDGRPFKT--RAGGTVRLADLLDE--AE 419 Query: 421 SVRFMMLWRKNSEL-----------LDFDFCKVKEQSKE-----------------NPVF 452 ++ KN EL + K + SK N Sbjct: 420 ERAKALIESKNPELSTEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAP 479 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 Y+QYAY R S+F +A +D ++ E + E LI L ++ +++ Sbjct: 480 YMQYAYTRVASVFAKA-----GVDMTQLTGHIQITEEK----EKALIAKLLQFEEAVQSV 530 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572 +P+ + YL++LA +F + + A + RL+L A I Sbjct: 531 AREGQPHIMCSYLFELAGIFSSFYE------ACPILVAEQESVKQSRLKLAALTAKTIKQ 584 Query: 573 GLNIIGVESPNEM 585 GL ++G+E+ M Sbjct: 585 GLALLGIETLERM 597 >gi|153826066|ref|ZP_01978733.1| arginyl-tRNA synthetase [Vibrio cholerae MZO-2] gi|149740183|gb|EDM54336.1| arginyl-tRNA synthetase [Vibrio cholerae MZO-2] Length = 599 Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 135/615 (21%), Positives = 231/615 (37%), Gaps = 126/615 (20%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ LG +P A+ ++ + +D IAG GFIN++ Sbjct: 49 LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLDGIASKTEIAGPGFINIF 108 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 LS +L + + G T V ++ + N MHVGH R ++GD + Sbjct: 109 LSEEFLAAQAEAALAD-TRLGVAQEAPKTIV-ADYSAPNVAKEMHVGHLRSTIIGDAVVR 166 Query: 153 LMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNND 193 + F G++V R +I D G Q L L F+R + LY+ D Sbjct: 167 TLEFLGHKVIRANHIGDWGTQFGMLIANLERVQKASGEVSMELSDLEAFYRESKKLYDED 226 Query: 194 SDLPEGYYPGVYLKHVGKELADKYSSELLN---FPEEKWLPIVKDYSVQAMMKIIRDDLK 250 E A Y +L F E W +V +Q Sbjct: 227 EQFA--------------ETARNYVVKLQGGDPFCLEMWKKLVDVTMIQ----------- 261 Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---CDMDRK 307 ++ ++ R + S R+ + + +Y +LP S K + D Sbjct: 262 ----------NQRNYDRLNVSLTRENVMGES----MYNDMLPQIVSDLKAKGLAVEDDGA 307 Query: 308 QLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY 363 Q++F G+ + + K DG + Y D+A K +YE G D ++Y + S + Sbjct: 308 QVVFLEEFKNKDGEPMGVIIQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQHQH 367 Query: 364 VKRLEAVAAAVSEKKAQI--NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 + + A + K I NV L + L +DG P K RAG + L ++DE Sbjct: 368 LMQ----AWTIVRKAGYIPENVSLEHHAFGMMLGKDGRPFKT--RAGGTVRLADLLDEAQ 421 Query: 419 SDSVRFMMLWRKNSEL-----------LDFDFCKVKEQSKE-----------------NP 450 + ++ KN EL + K + SK N Sbjct: 422 ERAK--ALIESKNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNT 479 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 Y+QYAY R S+F +A +D + ++ E + E LI L ++ ++ Sbjct: 480 APYMQYAYTRVASVFAKA-----GVDMNELTGHIQITEEK----EKALIAKLLQFEEAVQ 530 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 + +P+ + YL++LA +F + + A + RL+L A I Sbjct: 531 SVAREGQPHIMCSYLFELAGIFSSFYEA------CPILVAEQESIKQSRLKLAALTAKTI 584 Query: 571 NSGLNIIGVESPNEM 585 GL ++G+++ M Sbjct: 585 KQGLALLGIDTLERM 599 >gi|187933796|ref|YP_001886751.1| arginyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B] gi|187721949|gb|ACD23170.1| arginine--tRNA ligase [Clostridium botulinum B str. Eklund 17B] Length = 563 Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 125/539 (23%), Positives = 225/539 (41%), Gaps = 93/539 (17%) Query: 88 FINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N ++ + ++ I+ G YG + IG G + +E+ S N P HVGH + Sbjct: 77 YLNFFVDKGVFAENTINKILKDGDNYGESNIGDGKTICVEYSSPNIAKPFHVGHLFTTAI 136 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYYPGV 204 G++L + GY+V ++ D G Q L +S + W ++AL P + Sbjct: 137 GNSLYKMFKKEGYDVVGLNHLGDWGTQFGKL-ISAYNRWVDEEAL----EKAPIDELLRI 191 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVK----DYSVQAMMKIIRD-DLKALNIQHDIF 259 Y+K + A+K S +E + K D QA+ K RD LK +DI Sbjct: 192 YVKF--HDEAEKDPS----LEDEGRMYFKKLETGDPEAQALWKRFRDLSLKEFERVYDIL 245 Query: 260 ISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 + D G+ + +++ L +G + E S Q ++ Sbjct: 246 GVKFDSLAGEAFYNDKMDVVVNELKDKGLLVE-------SNGAQ-------------VVM 285 Query: 317 GDDVDRP---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 DD + P +LK DG+ Y DLA Y K Y+ F IYV+GS + + K++ V Sbjct: 286 LDDYNMPPCIVLKGDGASIYATRDLAAAMYRKKTYD--FYKSIYVVGSPQALHFKQVFKV 343 Query: 371 AA-----------------------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407 +S +K ++ VLL +L+R + ++++ + Sbjct: 344 LELAGHEWANDCVHVGFGLVKFADRKLSTRKGEV-VLLDDLIRESVEKTLEVINEKNPNL 402 Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFR 466 V ++G ++ F L + + FD+ ++ + + P YVQY+YAR SI Sbjct: 403 ENKEEVAKKIGVGAIIFTYLKNSREKDIVFDWKEILSFEGETGP--YVQYSYARANSIIS 460 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 +A++I +D+ E +L+ LA + I+ AT EP L Y+ Sbjct: 461 RAENISSKVDYSKLSS----------KEEFELVKVLANFNNQIKLATDKLEPSILTRYVI 510 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++A F+ ++ + ++ L RL LV + +I +GL ++G++ +M Sbjct: 511 EVAKSFNKFYNAH------SVLNLDDEVLKATRLSLVKSSLQVIKNGLELLGIDVVEKM 563 >gi|172058863|ref|YP_001815323.1| arginyl-tRNA synthetase [Exiguobacterium sibiricum 255-15] gi|229558758|sp|B1YFI1|SYR_EXIS2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|171991384|gb|ACB62306.1| arginyl-tRNA synthetase [Exiguobacterium sibiricum 255-15] Length = 560 Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 134/601 (22%), Positives = 246/601 (40%), Gaps = 115/601 (19%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IE+P+ HG L+ L++ P+ IA + +I +P +V AG ++N++ Sbjct: 27 LIEQPKHEDHGDLAF-PCFQLAKAFRKAPMMIATELAEKID-NPLFSNVQAAGP-YVNVF 83 Query: 93 LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+ + R+I+ ++ YG + + G + +F S N P +GH R V+G+ L Sbjct: 84 LNREVVSREIIKRVLEEQQAYGSSEL-NGKTIVTDFSSPNIAKPFSMGHLRSTVIGNALN 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLA--------------------LSVFWRYQQALYN 191 + GYEV ++ D G Q L L ++ R+ + Sbjct: 143 QISRKKGYEVVGINHLGDWGTQFGKLMVAYNMWGKEEDVRSEPIKELLKLYVRFHEEAEE 202 Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251 N EG + K + E D+ ++ L + E + +V+ V M+ + D L Sbjct: 203 NPGLEDEGR---AWFKKL--EQGDEQATALWTWFRE--VSLVEFSRVYEMLGVSFDSLNG 255 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 +D ++ +ID L + + E S+ D++ + + Sbjct: 256 EAFYND--------------KMQHVIDLLEEKDLLVE-------SEGAMVVDLEAEGM-- 292 Query: 312 RSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLE 368 P L K DG+ Y DLA + E GF+ YV+G + + + K+L Sbjct: 293 ----------PPALIKKKDGATLYATRDLAAAVYRLETYGFEQAFYVVGGEQALHFKQLF 342 Query: 369 AV-----------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405 AV +S +K +I VLL E+++ + ++++ Sbjct: 343 AVLKKLGFENVDGMHHVPFGLIMKDGKKMSTRKGRI-VLLEEVLQDAINVAKQNIAEKNP 401 Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSI 464 + EVG +V F L + ++FD + +K + + P YVQY AR S+ Sbjct: 402 NLANAEQTAREVGVGAVIFHDLKNERMNNIEFDLEQMLKFEGETGP--YVQYTNARANSL 459 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R+ D F + D ++ L ++ VI+ A +EP ++ Y Sbjct: 460 LRKGA-----YDGSAFNGSA-------DDYSWGVVSMLNQFSAVIDRAFTRREPSIISRY 507 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 + DLA F+ ++ ++R ++ + K + RL LV +V ++ GL ++GV +P E Sbjct: 508 VLDLAQSFNKYYG------QVRVLEDDAEKQS--RLALVKSVTIVLTEGLRLLGVGAPEE 559 Query: 585 M 585 M Sbjct: 560 M 560 >gi|189461674|ref|ZP_03010459.1| hypothetical protein BACCOP_02338 [Bacteroides coprocola DSM 17136] gi|189431646|gb|EDV00631.1| hypothetical protein BACCOP_02338 [Bacteroides coprocola DSM 17136] Length = 597 Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 126/564 (22%), Positives = 225/564 (39%), Gaps = 111/564 (19%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK----VNIEFVSANPTGPMHVGHC 141 KGF+NL ++ ++L+ I ++G I K T+ V IE+ S N P+H+GH Sbjct: 81 KGFLNLTIASDVWVELLNRIHADA-QWG---IQKATEDAPLVMIEYSSPNTNKPLHLGHV 136 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE--- 198 R ++G+ LA++MA +G +V + +ND G I L+ W L + + PE Sbjct: 137 RNNLLGNALANVMAANGNKVVKTNIVNDRGIHICKSMLA--W-----LKYGNGETPESSG 189 Query: 199 -------GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK------------DYSVQ 239 G Y + KH E+A+ L E P+++ D ++ Sbjct: 190 KKGDHLIGDYYVAFDKHYKAEVAELMEKGLSKEEAEAQSPLMQEAREMLRKWEANDPEIR 249 Query: 240 AMMKIIRD--------DLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290 A+ K + D K + + D I+ + + G + + +G+ Y Sbjct: 250 ALWKKMNDWVYAGFDETYKMMGVSFDKIYYESETYLEGKEKVLEGL-----EKGFFYR-- 302 Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GF 349 K + D+ T G D + LL++DG+ Y D+ K +++ Sbjct: 303 ----KEDGSVWADL---------TAEGLD-HKLLLRADGTSVYMTQDIGTAKLRFQDFPI 348 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI- 408 + MIYV+G++ + + + L + + + + V + +G KM R G + Sbjct: 349 NKMIYVVGNEQNYHFQVLSILLDKLGFEWGKDLVHFSYGMVELPEG---KMKSREGTVVD 405 Query: 409 ------TLRHVVDEVGSDSVRFMMLWRKNSE-------LLDFDFCKVKEQSKENPVF--- 452 + E S+ + L ++ ++ L + +K +++N F Sbjct: 406 ADDLMEAMIETAKETSSELGKLDGLTKEEADDIARIVGLGALKYFILKVDARKNMTFNPK 465 Query: 453 -----------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501 ++QY YAR +SI R+A + + VIP E T E LI Sbjct: 466 ESIDFNGNTGPFIQYTYARIQSILRKAAEA------GITIPAVIPTGVELSTKEEGLIQM 519 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 LA++ V+ A P LA Y YDL ++ + ++ N L + RL Sbjct: 520 LADFTNVVRQAGSDYNPSILANYAYDLVKEYNQFYHD------FSILREENEALKVFRLA 573 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 L V I+ + ++G+E P M Sbjct: 574 LSQNVGKIVKLAMGLLGIEVPERM 597 >gi|315426742|dbj|BAJ48366.1| arginyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum] Length = 624 Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 88/335 (26%), Positives = 145/335 (43%), Gaps = 31/335 (9%) Query: 27 KILDRIVIERPR-----DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV--D 79 ++L + + +PR D G +S++ A L++ G P+ +A+ +V R+ + V + Sbjct: 10 RLLADVGVGQPRVSLAKDARFGDVSSSDAFDLAKKTGKKPVEMAKELVERMDLSRTVYVE 69 Query: 80 SVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138 +AG G+IN Y P I+S G YG +G G V +E S NP +H+ Sbjct: 70 RAEVAGAGYINFYARWPRLAADIVSEACEKGRSYGETGLGGGQYVLVEHTSVNPNKALHI 129 Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198 GH R +GD+LA L+ +GY V YI+D+G Q+ L L+ ++ Y+ + E Sbjct: 130 GHARNVCLGDSLARLLKKNGYHVAVANYIDDSGVQMAELLLA----FKHLGYSMEPTKGE 185 Query: 199 GY--YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ----AMMKIIRDDLKA- 251 + Y G V K + E L L + Q + +++ + L+ Sbjct: 186 KFDEYCGRVYTEVSKRIEADPRLETLRRQLAAQLEDHDSETSQLNRLVVERVLMEQLRTC 245 Query: 252 --LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 L ++D+ E D D ++ L G +Y P K C + Sbjct: 246 WRLGARYDVLNKESDILFFD--LWSEVFKRLREMGVLYVAEEGPKKG-----CWLFDLSG 298 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK 344 + + GD+V ++KSDGS TY A D Y K Sbjct: 299 HPKLSKEGDEV---VVKSDGSTTYVARDFGYAAWK 330 Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 20/175 (11%) Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKD 470 V +++ ++R+ ++ +++ FD + + + P Y+QYAYAR I +A D Sbjct: 469 EVAEKIAVAAIRYFLIRADPDKMIVFDSEEASDIEGDTGP--YIQYAYARATRILEKA-D 525 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 P+ P+N + D E+ LI + P V E A ++A YL +LA Sbjct: 526 TQPN------PQN---PPTTLDPKEIMLIKQIGMLPLVYEEAVRNLSVKRIATYLRELAF 576 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ + + V + + K+ + RL LV A S ++S + G+ EM Sbjct: 577 AFNDFYENCP-------VLSADEKVKVFRLALVEAFRSAVSSAADAAGIPLVEEM 624 >gi|164425840|ref|XP_959285.2| arginyl-tRNA synthetase [Neurospora crassa OR74A] gi|157071086|gb|EAA30049.2| arginyl-tRNA synthetase [Neurospora crassa OR74A] Length = 640 Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 134/607 (22%), Positives = 247/607 (40%), Gaps = 124/607 (20%) Query: 55 RPLGLDPLTIAELIVARIKIDPDVDSVFI---AGKGFINLYLSPSYL-RKILSSIVVSGI 110 R G P +A+ A+ PD D +F + ++ ++ S L ++ + G Sbjct: 82 RVKGKKPDELAQEWAAKF---PDTDPLFTKPTVSQIHLSFFVKASPLVNAVIPMVQHKGA 138 Query: 111 EYGRNLI---------GKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 EYG N KG K + +EF S N P H GH R ++G L++L A +G++ Sbjct: 139 EYGFNKADGLKDPKDPSKGQKRIIVEFSSPNIAKPFHAGHLRSTIIGGFLSNLYAGAGWD 198 Query: 161 VTREYYINDAGAQINTLALSVFWRY--QQALYNN------------DSDLPEGYYPGVYL 206 V R Y+ D G Q LAL+ + +Y ++AL + ++++ Sbjct: 199 VIRINYLGDWGKQYGLLALA-YEKYGDEEALQKDPINHLFQLYVRINTEMTAEKEELTKR 257 Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM--------MKIIR--DDLKALNIQH 256 K G++++ + L+ ++ + D A+ + I+R D LNI Sbjct: 258 KEAGEDVS-ALEANSLDEQARRYFKKMTDRDADALAMWKRFRDLSIVRYKDTYARLNIHF 316 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR-KQLLFRSTM 315 D + E + + ++++ + C D+ QL+ S + Sbjct: 317 DEYSGESQVSEEAMNKVGNLMEE-------------------KKICKEDKGAQLIDFSEL 357 Query: 316 V----GDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEA 369 V G +++PL+ K DG+ Y D++ ++E+ FD MIYV+ S ++++L Sbjct: 358 VPGKEGKRLEKPLVRKRDGTALYLTRDISELLGRHEKYNFDKMIYVVASAQDLHLRQLFK 417 Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429 + + K C+ + G+ + MS R G L ++ +V +D + +M Sbjct: 418 IIELLGYKDIADK---CQHINF---GLVLGMSTRKGTVKFLDDILRDV-ADKMHEVMKKN 470 Query: 430 KN-----------SELLDFDFCKVKEQSKE---NPVF--------------YVQYAYARC 461 +N +++L V++ S + N F Y+QYA+AR Sbjct: 471 ENKYSQIEDPLATADVLGISSVMVQDMSGKRINNYTFNMETMTSFEGDTGPYLQYAHARL 530 Query: 462 RSIFRQA---KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 SI R+A + D L +TS + L H+A +P V++N EP Sbjct: 531 NSIRRKAGVSDEELATADLSLLT----------ETSAINLCRHMAGWPDVVKNTLKTLEP 580 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 + YL+ L + + V + +L RL L AV +++ +G+ +IG Sbjct: 581 TTVLTYLFKLTHALSSSYDQLQ-------VVGSEPELMKARLALYTAVQTVLANGMRLIG 633 Query: 579 VESPNEM 585 + + M Sbjct: 634 LSPVDRM 640 >gi|84996665|ref|XP_953054.1| arginyl-tRNA synthetase [Theileria annulata strain Ankara] gi|65304050|emb|CAI76429.1| arginyl-tRNA synthetase, putative [Theileria annulata] Length = 632 Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 111/424 (26%), Positives = 181/424 (42%), Gaps = 79/424 (18%) Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GF+ LS ++ + + S+ G ++ G V I+F S N MHVGH R V+ Sbjct: 107 GFMTFVLSNDWIEQEIRSLAKYGPSVDKSTEKHGETVVIDFSSPNIAKEMHVGHLRSTVI 166 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN--NDSDLPEGYYPGV 204 GD+LA ++ F GY+V R ++ D G Q L +F +Y L N + SDL + Y Sbjct: 167 GDSLARVLEFFGYKVRRINHLGDWGTQFGMLIEYMFEKYPDFLNNMPSISDLTKFYKEAK 226 Query: 205 YLKHVGKELADKYSSELLNFP---EEKWL--PIVKDYSVQAMMKIIRDDLKALNIQHDIF 259 V +E K S ++ EE L ++ D S+++ +I K L+I +IF Sbjct: 227 LRMDVDEEFKKKSRSRVVRLQSGDEESKLVWKVLCDISLESFNRI----YKRLDINFEIF 282 Query: 260 ISEDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 E ++ P ++D+ D +A++ EG L ++F Sbjct: 283 -GESFYNDMIPEIVKDLQDRGIAQES---EGAL-----------------VIFTD---AS 318 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 V L+KSDG + Y + DLA + + ++ D +IYV S + +L K Sbjct: 319 SVPLMLVKSDGGFGYDSTDLACIRYRTQQLKADWIIYVTDIGQSEHFLKL--------FK 370 Query: 378 KAQINVLLCELVRLYRDGMPI-------KMSKRAGDFITLRHVVDE-------------- 416 AQI CE VR+ G + K R+GD + L ++DE Sbjct: 371 SAQI-AGWCENVRIDHVGFGMVQNEFGEKFKTRSGDTVKLVDLLDEAVKRSKIELEKRDP 429 Query: 417 -----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 +G S+++ L + F F K+ + + N Y+ Y+YAR IF Sbjct: 430 NIPNLDEIAEALGYGSIKYFDLNHSVTTNYKFSFDKMLD-PRGNTAVYMFYSYARICQIF 488 Query: 466 RQAK 469 ++A+ Sbjct: 489 KKAQ 492 >gi|323948238|gb|EGB44226.1| arginyl-tRNA synthetase [Escherichia coli H120] Length = 462 Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 121/501 (24%), Positives = 208/501 (41%), Gaps = 80/501 (15%) Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +++ + N MHVGH R ++GD + F G++V R ++ D G Q L + W Sbjct: 2 VDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGML---IAWL 58 Query: 185 YQQALYNND----SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 +Q N +DL EG+Y A K+ E F E +VK +Q+ Sbjct: 59 EKQQQENAGEMELADL-EGFYRD----------AKKHYDEDEEFAERARNYVVK---LQS 104 Query: 241 MMKIIRDDLKALNIQHDIFISEDD--FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + R+ + L DI ++++ + R + + RD + + + GI+ K+K Sbjct: 105 GDEYFREMWRKLV---DITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKG 161 Query: 299 TQKCDMDRKQLLFRSTMV---GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354 + + ++F G+ + + K DG Y Y D+A K +YE D ++Y Sbjct: 162 L-AVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLY 220 Query: 355 VMGSDHSGYVKRLEAV---AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 + S ++ + A+ A V E + + + L +DG P K RAG + L Sbjct: 221 YIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMM--LGKDGKPFKT--RAGGTVKLA 276 Query: 412 HVVDE---------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE 444 ++DE VG +V++ L + + FD+ + Sbjct: 277 DLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML- 335 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 + N Y+QYAY R S+FR+A +I + L VI +E E QL L + Sbjct: 336 AFEGNTAPYMQYAYTRVLSVFRKA-EINEE---QLAAAPVIIRED----REAQLAARLLQ 387 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 + + P+ + YLYDLA +F G + H + A N ++ RL+L Sbjct: 388 FEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH------CPILSAENEEVRNSRLKLAQ 441 Query: 565 AVASIINSGLNIIGVESPNEM 585 A + GL+ +G+E+ M Sbjct: 442 LTAKTLKLGLDTLGIETVERM 462 >gi|195553723|ref|XP_002076727.1| GD24677 [Drosophila simulans] gi|194202717|gb|EDX16293.1| GD24677 [Drosophila simulans] Length = 665 Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 139/597 (23%), Positives = 252/597 (42%), Gaps = 101/597 (16%) Query: 43 GHLSTNAAMILSRPL---GLD--PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N AM LS+ L G++ P IA + P ++ + IAG GF+N++LS Y Sbjct: 116 GDYQCNNAMGLSKKLKEKGINKAPRDIATELKGHCPASPIIEKLEIAGAGFVNVFLSKDY 175 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 LS+++ +G+ +I K +V ++F S N MHVGH R ++G++L L+ F Sbjct: 176 ASSALSNLLRNGVT-PPEVIKK--RVLVDFSSPNIAKQMHVGHLRSTIIGESLCRLLEFL 232 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215 ++V R ++ D G Q L + R+ L + SDL Y +E Sbjct: 233 QHDVIRINHLGDWGTQFGMLIAHLEDRFPNYLNESPPISDLQLFYKESKKRFDEDEEFKK 292 Query: 216 KYSSELLNFPEEKWLP-IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---S 271 + S +++ +K +P +K + + + + R + + + + DI + E RG+ S Sbjct: 293 RAYSRVVSL--QKGVPNSIKAWEL--ICNVSRKEFQTIYERLDISVKE----RGESFYQS 344 Query: 272 PIRDIIDNLARQGY--VYEG--ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 + +++ L +G V EG I+ P +KT + ++KS Sbjct: 345 RMLSVVEYLRGKGLLEVDEGREIMWPDDTKT--------------------GIPLTIVKS 384 Query: 328 DGSYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386 DG +TY +D+A + + E D +IYV+ S S + + A E+ A +N L Sbjct: 385 DGGFTYDTSDMAAIRHRLEEELCDWIIYVVDSGQSTHFNTIFKAA----ERSAILNPLSH 440 Query: 387 EL------VRLYRDGMPIKMSKRAGDFITLRHVVDE-----------VGSDSVRFMMLWR 429 + V L DG K R+GD + L ++DE G D V + Sbjct: 441 RVDHVQFGVVLGEDGKKFKT--RSGDTVKLADLLDEGMKRSLQQLESRGRDKVLTPQELK 498 Query: 430 KNSELLDF------DFCKVK-----------EQSKENPVFYVQYAYARCRSIFRQAKDIF 472 E L + D C + + + N Y+ Y Y R SI R + + F Sbjct: 499 DAQESLAYGCIKYSDLCHNRISDYIFSFDKMLEDRGNTAVYLLYTYTRICSIARNSGEDF 558 Query: 473 PDLDFDLFPRN-VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 +L L N V+ E E+ ++ L +H ++ + + L + +++ +V Sbjct: 559 TNLPEILKKTNIVLAHEKEWKLAKTLLKLH-----DILIKCSKELFLHFLCEFCFEVCTV 613 Query: 532 FHGHWSHG---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + +N + + N+ ++ M A A+++ I+G++ ++M Sbjct: 614 FTEFYDSCYCIEKNKQGDIIAVNHSRILM-----CEATAAVLRQCFYILGLKPVSKM 665 >gi|18859963|ref|NP_573081.1| Arginyl-tRNA synthetase [Drosophila melanogaster] gi|20178140|sp|Q9VXN4|SYRC_DROME RecName: Full=Probable arginyl-tRNA synthetase, cytoplasmic; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|7293140|gb|AAF48524.1| Arginyl-tRNA synthetase [Drosophila melanogaster] gi|17944966|gb|AAL48546.1| RE02962p [Drosophila melanogaster] gi|220947778|gb|ACL86432.1| Aats-arg-PA [synthetic construct] Length = 665 Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 140/597 (23%), Positives = 253/597 (42%), Gaps = 101/597 (16%) Query: 43 GHLSTNAAMILSRPL---GLD--PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N AM LS+ L G++ P IA + P ++ + IAG GF+N++LS Y Sbjct: 116 GDYQCNNAMGLSKKLKEKGINKAPRDIATELKGHCPASPIIEKLEIAGAGFVNVFLSKDY 175 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 LS+++ +G++ +I K +V ++F S N MHVGH R ++G++L L+ F Sbjct: 176 ASLALSNLLRNGVK-PPEVIKK--RVLVDFSSPNIAKQMHVGHLRSTIIGESLCRLLEFL 232 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215 ++V R ++ D G Q L + R+ L + SDL Y +E Sbjct: 233 QHDVIRINHLGDWGTQFGMLIAHLEDRFPNYLNESPPISDLQLFYKESKKRFDEDEEFKK 292 Query: 216 KYSSELLNFPEEKWLP-IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---S 271 + S +++ +K +P +K + + + + R + + + + DI + E RG+ S Sbjct: 293 RAYSRVVSL--QKGVPNSIKAWEL--ICNVSRKEFQTIYERLDISVKE----RGESFYQS 344 Query: 272 PIRDIIDNLARQGY--VYEG--ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 + +++ L +G V EG I+ P +KT + ++KS Sbjct: 345 RMLSVVEYLRGKGLLEVDEGREIMWPDDTKT--------------------GIPLTIVKS 384 Query: 328 DGSYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386 DG +TY +D+A + + E D +IYV+ S S + + A E+ A +N L Sbjct: 385 DGGFTYDTSDMAAIRHRLEEELCDWIIYVVDSGQSTHFNTIFKAA----ERSAILNPLSH 440 Query: 387 EL------VRLYRDGMPIKMSKRAGDFITLRHVVDE-----------VGSDSVRFMMLWR 429 + V L DG K R+GD + L ++DE G D V + Sbjct: 441 RVDHVQFGVVLGEDGKKFKT--RSGDTVKLSDLLDEGMKRSLQQLESRGRDKVLTPQELK 498 Query: 430 KNSELLDF------DFCKVK-----------EQSKENPVFYVQYAYARCRSIFRQAKDIF 472 E L + D C + + + N Y+ Y Y R SI R + + F Sbjct: 499 DAQESLAYGCIKYSDLCHNRISDYIFSFDKMLEDRGNTAVYLLYTYTRICSIARNSGEDF 558 Query: 473 PDLDFDLFPRN-VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 +L L N V+ E E+ ++ L +H ++ + + L + +++ +V Sbjct: 559 TNLPEILKKTNIVLDHEKEWKLAKTLLKLH-----DILIKCSKELFLHFLCEFCFEVCTV 613 Query: 532 FHGHWSHG---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + +N + + N+ R+ L A A+++ I+G++ ++M Sbjct: 614 FTEFYDSCYCIEKNKQGDIIGVNHS-----RILLCEATAAVLRQCFYILGLKPVSKM 665 >gi|71985068|ref|NP_001022552.1| aRginyl aa-tRNA syntheTase family member (rrt-1) [Caenorhabditis elegans] gi|51536889|gb|AAU05575.1| Arginyl aa-trna synthetase protein 1, isoform b, partially confirmed by transcript evidence [Caenorhabditis elegans] Length = 692 Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 128/537 (23%), Positives = 233/537 (43%), Gaps = 71/537 (13%) Query: 43 GHLSTNAAMILSRPLGLD-----PLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPS 96 G N+AM ++ L + P +A+ I A++ D V+ + + GFIN++L+ Sbjct: 163 GDYQCNSAMPIAAKLKANKINKRPGDVAKEIQAKLPTKIDFVEKIDVMPAGFINIFLNTD 222 Query: 97 YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 YLR+ +S + G++ + L K +V ++F S N MHVGH R ++GD++ L Sbjct: 223 YLRRQISLLASEGVKLPK-LTRK--RVLVDFSSPNIAKEMHVGHLRSTIIGDSICRLFEA 279 Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216 G++V R +I D G Q L ++ R+ L LP+ + K K Sbjct: 280 VGFDVLRVNHIGDWGTQFGMLIAHLYDRFPDFL----KKLPDISDLQAFYKESKKRF--- 332 Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF-HRGDPSPIRD 275 E F + + +VK S D +KA N D+ + + I+D Sbjct: 333 --DEDEQFKKRAYEYVVKLQSHDG------DIVKAWNTICDVSKKYNQIVYNYLDIKIKD 384 Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + + + + ++ K T K DM D +Q++F + G D+ ++KSDG + Sbjct: 385 V-----GESFYQDKMIELVKWVKTNKPDMLREEDGRQIMFPT---GCDIPLTVVKSDGGF 436 Query: 332 TYFAADLAYFKCKY-ERGFDNMIYVMGSDHS-------------GY----VKRLEAVAAA 373 TY +DLA K + E D IYV+ S S G+ ++R+E VA Sbjct: 437 TYDTSDLAALKYRMLEEKCDWNIYVVDSGQSLHLETVYAAGRDFGWYDESIQRVEHVAFG 496 Query: 374 V------------SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 + S + ++ LL E V+ + + K + A L D V Sbjct: 497 LVLGDDKKKFKTRSGETVRLLDLLSEGVKRATEKLIEKGRETAMSEEQLVAARDAVAFGC 556 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 V++ L ++ F F ++ E + N Y+ YAY R +SIF + + DL + Sbjct: 557 VKYADLSHTRTQDYVFSFDRMLE-DRGNTAVYLLYAYTRIQSIFEKDEVKNVDLVKYIAS 615 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 +P + + + ++ L++ ++ ++ + +++ Y+Y LA++FH ++ Sbjct: 616 TPTLPLDHPGEFKLAKQLLKLSDCVLLVLDSLML---HQMCDYVYQLATLFHDFYNE 669 >gi|329925160|ref|ZP_08280103.1| arginine--tRNA ligase [Paenibacillus sp. HGF5] gi|328939993|gb|EGG36326.1| arginine--tRNA ligase [Paenibacillus sp. HGF5] Length = 620 Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 89/347 (25%), Positives = 150/347 (43%), Gaps = 47/347 (13%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKG 87 I IE+P HG +TN AM L++ L PL IAELI A ++ D V S I G Sbjct: 31 IRIEQPASMEHGDYATNVAMQLAKVLRKAPLQIAELIQAELEQDASYKQLVRSTEIVAPG 90 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 F+NL + Y + + E K+ IE S NP H+GH R + +G Sbjct: 91 FMNLRIDWEYWASHHFELPPAANE----------KIVIEHTSINPNKSAHIGHLRNSCIG 140 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 DTL LM GYEV YI+D G Q+ + + + D Y Sbjct: 141 DTLVRLMRKLGYEVEVHNYIDDLGNQLADTVVGLLHTPLTKEHARFGDYCWDVYSSTNKA 200 Query: 208 HVGKELADKYSSELLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262 + + ++ +E+L+ EE W+ ++ + ++K +++K I++D+ + E Sbjct: 201 YEREPGLVEHRTEVLHALEEGNQNLSWIGLL---VAERIVKEHLEEMKQFGIEYDLLVWE 257 Query: 263 DDFHRGDPSPIRDIIDNLARQGY---VYEGILPPPKSKTTQKCDMDRKQLLFRS-TMVGD 318 ++ ++G+ +E + P + + +L +S T GD Sbjct: 258 ---------------SSIVKEGFWASAFELLKNTPLFHQETEGKLAGCWVLKQSGTEAGD 302 Query: 319 D------VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + +D+ L++S+G TY A D+AY KY ++ +Y +D Sbjct: 303 EAESDHSIDKVLVRSNGILTYTAKDIAYHLWKYGVLSNDFVYKKFTD 349 >gi|195355443|ref|XP_002044201.1| GM22521 [Drosophila sechellia] gi|194129490|gb|EDW51533.1| GM22521 [Drosophila sechellia] Length = 665 Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 128/510 (25%), Positives = 217/510 (42%), Gaps = 88/510 (17%) Query: 43 GHLSTNAAMILSRPL---GLD--PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N AM LS+ L G++ P IA + P ++ + IAG GF+N++LS Y Sbjct: 116 GDYQCNNAMGLSKKLKEKGINKAPRDIATELKGHCPASPIIEKLEIAGAGFVNVFLSKDY 175 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 LS+++ +G+ +I K +V ++F S N MHVGH R ++G++L L+ F Sbjct: 176 ASSALSNLLRNGVT-PPEVIKK--RVLVDFSSPNIAKQMHVGHLRSTIIGESLCRLLEFL 232 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215 ++V R ++ D G Q L + R+ L + SDL Y +E Sbjct: 233 QHDVIRINHLGDWGTQFGMLIAHLEDRFPNYLNESPPISDLQLFYKESKKRFDEDEEFKK 292 Query: 216 KYSSELLNFPEEKWLP-IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---S 271 + S +++ +K +P +K + + + + R + + + + DI + E RG+ S Sbjct: 293 RAYSRVVSL--QKGVPNSIKAWEL--ICNVSRKEFQTIYERLDISVKE----RGESFYQS 344 Query: 272 PIRDIIDNLARQGY--VYEG--ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 + +++ L +G V EG I+ P +KT + ++KS Sbjct: 345 RMLSVVEYLRGKGLLEVDEGREIMWPDDTKT--------------------GIPLTIVKS 384 Query: 328 DGSYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386 DG +TY +D+A + + E D +IYV+ S S + + A E+ A +N L Sbjct: 385 DGGFTYDTSDMAAIRHRLEEELCDWIIYVVDSGQSTHFNTIFKAA----ERSAILNPLSH 440 Query: 387 EL------VRLYRDGMPIKMSKRAGDFITLRHVVDE-----------VGSDSVRFMMLWR 429 + V L DG K R+GD + L ++DE G D V + Sbjct: 441 RVDHVQFGVVLGEDGKKFKT--RSGDTVKLADLLDEGMKRSLQQLESRGRDKVLTPQELK 498 Query: 430 KNSELLDF------DFCKVK-----------EQSKENPVFYVQYAYARCRSIFRQAKDIF 472 E L + D C + + + N Y+ Y Y R SI R + + F Sbjct: 499 DAQESLAYGCIKYSDLCHNRISDYIFSFDKMLEDRGNTAVYLLYTYTRICSIARNSGEDF 558 Query: 473 PDLDFDLFPRN-VIPQESEFDTSELQLIVH 501 +L L N V+ E E+ ++ L +H Sbjct: 559 TNLPEILKKTNIVLAHEKEWKLAKTLLKLH 588 >gi|72383390|ref|YP_292745.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A] gi|109895017|sp|Q46HI6|SYR_PROMT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|72003240|gb|AAZ59042.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A] Length = 607 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 139/609 (22%), Positives = 243/609 (39%), Gaps = 114/609 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKGFINLYL-SPSY 97 G N A+ L++ + P IA+ I +++ D D + IAG GFINL + S + Sbjct: 47 GDFQINCALSLAKEIKQPPREIAQKIANQLQKDNDFVRMCNPPRIAGPGFINLSINSKTL 106 Query: 98 LRKI------------LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 + +I L IE G++ +V ++F S N MHVGH R + Sbjct: 107 ISEIHVRLNDKRLGVPLKKFSTDKIEEGKS----NNRVILDFSSPNIAKEMHVGHLRSTI 162 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYY 201 +GD+LA ++ F GYEV R ++ D G Q L + + L+ D SDL Y Sbjct: 163 IGDSLARILEFRGYEVLRLNHVGDWGTQFGMLITHLKEVVPEVLHTKDVVEISDLVNFYR 222 Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 + +K SE++N ++ + Q + R + + + + DI ++ Sbjct: 223 QAKKRFDEDQIFQNKSRSEVVNLQAGDKESLI---AWQLLCNQSRKEFQKIYDRLDIKLT 279 Query: 262 EDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 E RG+ + D+I++L + + + Q +F +VG Sbjct: 280 E----RGESFYNKFLVDVINDLKNKKLL---------------INDQGAQCIFLDGLVGK 320 Query: 319 DVD-RPLL--KSDGSYTYFAADLAYFKCK-----YERGFDNMIYVMGSDHSGYVKRLEAV 370 + +P++ KSDG + Y DLA K + + G +IYV + + + + + Sbjct: 321 NGKPQPIIIQKSDGGFNYATTDLAAIKYRLTIPPHGDGACRLIYVTDAGQASHFSGVFQI 380 Query: 371 AAAVS--EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416 A + QI + LV+ DG K+ R+G+ I L ++DE Sbjct: 381 AKLANWIPTDCQIEHVPFGLVQ-GEDGK--KLKTRSGETIRLVDLLDEAIQRAKNDLKNR 437 Query: 417 -------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457 VG S+++ L + F F K+ + N Y+ YA Sbjct: 438 LNTERRSENENFIDKVSTTVGIASIKYADLSQNRISNYQFSFDKMLSL-QGNTAPYLLYA 496 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS-ELQLIVHLAEYPRVIENATIAQ 516 R I R+ D+ NV +F+ S E +LI L + +I Sbjct: 497 LVRIAGISRKGGDL-----------NVSSHNIQFNESQEWELIRKLLQLDYIIAEVEKEL 545 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 P +L YL++L+ F+ + + P L+ + + RL L A + G+++ Sbjct: 546 LPNRLCGYLFELSQTFNRFYD---QVPILKASEPSR----ASRLILCSITADTLKLGMSL 598 Query: 577 IGVESPNEM 585 +G+ + M Sbjct: 599 LGIPTLERM 607 >gi|227540420|ref|ZP_03970469.1| arginine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300] gi|227239744|gb|EEI89759.1| arginine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300] Length = 594 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 122/582 (20%), Positives = 239/582 (41%), Gaps = 112/582 (19%) Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 + E + +RI P++ S F KGF+N+ LS +Y ++L+S +++ ++G G K+ Sbjct: 65 VGEFLQSRI---PEL-SGFNVIKGFLNVSLSDNYWIELLNSTLLAS-DFG-CFPANGKKL 118 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSV 181 +E+ S N P+H+GH R ++G ++A ++ GY+V + +ND G I + LA Sbjct: 119 MVEYSSPNTNKPLHLGHIRNNLLGYSVAEILKAYGYDVIKANLVNDRGIHICKSMLAWQK 178 Query: 182 FWRYQQ-ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 F + A D G Y ++ K K++ + + +K P++++ Q Sbjct: 179 FGNGETPASSGLKGDHLVGKYYVIFDKEYKKQIDELKAEGQTEEEAKKNAPLIRE--AQE 236 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 M++ + GD I ++ + G+VY G K+ Sbjct: 237 MLQ--------------------QWEAGDQQVI-ELWSTM--NGWVYSGF---EKTYNQL 270 Query: 301 KCDMDRKQLLFRSTMVGDDV----------------------------DRPLLKSDGSYT 332 D D+ + ++G D+ + +L+ DG+ Sbjct: 271 GVDFDKYYYESNTYLLGKDIIQEGLDSGVFFKKEDNSVWIDLTDEGLDQKLVLRGDGTSV 330 Query: 333 YFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ----------- 380 Y DL + KY E + IYV+G++ + K L + + + A Sbjct: 331 YITQDLGTAQLKYDEFHMNESIYVVGNEQDYHFKVLFLILKKLGKSWASGLFHLSYGMVD 390 Query: 381 ---------------INVLLCELVRLYRDGMPIKMSKRAGDFITLR-HVVDEVGSDSVRF 424 + L+ E+V ++ ++ K G T + + + +G ++++ Sbjct: 391 LPSGKMKSREGTVVDADDLMSEMVETAKERTE-ELGKTEGFSETEKAELYNTIGMGALKY 449 Query: 425 MMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 +L + L FD + V Q P ++QY +AR +S+ +A Sbjct: 450 FLLKVDPKKRLLFDPNESVDFQGHTGP--FIQYTHARIKSVLNKA---------GFSEAT 498 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + + + + E LI L +P VIE + P +LA Y+YD+A +++ + Sbjct: 499 PVTKPASISSYERDLIQVLGNFPVVIEASAKEFSPAQLANYIYDVAKLYNKFYHEE---- 554 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++A ++ RL L A +I+ G+N++G++ P M Sbjct: 555 --SILKAEEEEVKNFRLHLSATAARVISKGMNLLGIQVPERM 594 >gi|303233657|ref|ZP_07320311.1| arginine--tRNA ligase [Finegoldia magna BVS033A4] gi|302495091|gb|EFL54843.1| arginine--tRNA ligase [Finegoldia magna BVS033A4] Length = 564 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 131/571 (22%), Positives = 235/571 (41%), Gaps = 90/571 (15%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI-- 110 L++ P IAE + + + ++ + G ++N +++ S K++ S++ I Sbjct: 46 LAKTFRKAPNLIAEDLAQKEFQNENIKKIANVGP-YVNFFVNNS---KLIESVLTEAIKD 101 Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170 ++G + IG G V ++F S N P H+GH R V+G+ + ++M G+ T YI D Sbjct: 102 DFGSSHIGVGKNVVLDFSSTNIAKPFHIGHLRSTVIGNAIRNIMKHQGFNTTGVNYIGDY 161 Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230 G Q + +S + ++ N + E V + KE + Y E + W Sbjct: 162 GTQFG-MMISAYLKWGDENKINADPIKELLNLYVKYNKIAKE-DETYMDEARD-----WF 214 Query: 231 PIV--KDYSVQAMMKIIRD-DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287 + KD + + R+ LK +D+ + D G+ + I D L Sbjct: 215 DKLEKKDPTAVKLWSWFREISLKEFQRVYDLLGVKFDNFNGESFHSQFIGDALEA----- 269 Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRS----TMVGDDVDRP---LLKSDGSYTYFAADLA- 339 +D+K LL S + DD + P + KS+GS TY D+A Sbjct: 270 ----------------IDKKNLLEESDGAMIINLDDENLPPVLIKKSNGSSTYLTRDIAT 313 Query: 340 --YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA----------------AAVSEKKAQI 381 Y K Y+ F +YV+ S + ++L AV VS K + Sbjct: 314 AMYRKKTYD--FYKNVYVVASQQKLHFEQLRAVLKKMGFDWWNDCEHVSFGMVSMKDGSM 371 Query: 382 N------VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435 + L +++ D + +R + V +VG +V F L+ + Sbjct: 372 KTREGKVIFLEDVLNRAIDKTKSIIEERNPNLENKEEVAKQVGVGAVIFQDLFNNRIKDY 431 Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTS 494 FD+ +V E Y QY +AR SI + + ++ + FDL D + Sbjct: 432 TFDWDQVLNFDGETGP-YTQYTFARSCSILDKGEFELKDNSKFDLL----------VDDT 480 Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554 E+ ++ HL+++ V+ NAT EP L Y +LA +F+ +++ + + Sbjct: 481 EIDIVKHLSKFEEVLLNATEKYEPSFLTRYTVELAKLFNKFYANCP-------INTAEDE 533 Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L RL L ++V + L+++G+E+P M Sbjct: 534 LKYQRLYLTYSVNKCLKLSLSLLGIEAPVRM 564 >gi|166031101|ref|ZP_02233930.1| hypothetical protein DORFOR_00786 [Dorea formicigenerans ATCC 27755] gi|166028948|gb|EDR47705.1| hypothetical protein DORFOR_00786 [Dorea formicigenerans ATCC 27755] Length = 588 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 139/611 (22%), Positives = 244/611 (39%), Gaps = 116/611 (18%) Query: 36 RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95 RP C + N AM ++ P+ IA+ +VA+++ V GFINL L Sbjct: 33 RPDLCEY---QCNGAMAGAKAYHKAPIMIAQDVVAKLEGSGCFCDVQAVNPGFINLKLDE 89 Query: 96 SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155 ++ L + + G N + I++ N P+HVGH R A++G+++ + Sbjct: 90 RFVADYLDEMETDE-DLGLNKTDNPKMIVIDYGGPNVAKPLHVGHLRSAIIGESVKRISR 148 Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG-----------V 204 G+ V + ++ D G Q+ + + R + Y +++ +G YP + Sbjct: 149 KMGHNVLGDIHLGDWGYQMGLIITELKERKPELPYFDEN--FKGEYPAEAPFTISELEEI 206 Query: 205 YLKHVGKELADK-------YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA----LN 253 Y GK D+ +++ LL + + I +M + +DLK LN Sbjct: 207 YPTASGKAKEDEEYRERALHATYLLQNGHKGYTAIW-----NHIMHVSVNDLKKNYANLN 261 Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313 + D++ E D + I D+I+ L ++G+ + +D L+ Sbjct: 262 VDFDLWKGESDAQ----AYIPDMIERLKKEGFAH----------------VDDGALVIDV 301 Query: 314 TMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEA 369 D + P + KSDG+ Y DLA + E D +IYV+ + L Sbjct: 302 QEESDTKEIPPCMIQKSDGASLYGTTDLATLVQRVEDYHPDKVIYVVDKR-----QELHF 356 Query: 370 VAAAVSEKKAQINVLLCELVRLY------RDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 V + KK I EL L +DG P K R G + L +++ E+ + Sbjct: 357 VQVFRAAKKTGIVPSETELKFLGFGTMNGKDGKPFKT--REGGVMRLENLIAEIQEE--- 411 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA-KDIFPDLD-FDLFP 481 +++K + D V+E+ +N V A + + QA KD D+D F F Sbjct: 412 ---MYKKIT-----DNRTVEEEEAKNTAKTVGMAAIKYGDLSNQASKDYVFDVDRFTSFE 463 Query: 482 RNVIP----------------QE-----------SEFDTSELQLIVHLAEYPRVIENATI 514 N P QE + SE L++ L +Y ++ENA Sbjct: 464 GNTGPYILYTIVRIKSILNKYQEEGKAVTGLKVNQQSGESEKALMLALVKYNEMMENAYE 523 Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 P+K+ Y+YDLA+ F+ H+ H + + N + L+ ++ S + Sbjct: 524 ELAPHKICAYIYDLANAFN-HFYH-----ETKILAEENEAKKQGYIALLILTKKVLESCI 577 Query: 575 NIIGVESPNEM 585 +++G E+P M Sbjct: 578 DVLGFEAPERM 588 >gi|168214506|ref|ZP_02640131.1| arginyl-tRNA synthetase [Clostridium perfringens CPE str. F4969] gi|170714040|gb|EDT26222.1| arginyl-tRNA synthetase [Clostridium perfringens CPE str. F4969] Length = 565 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 126/545 (23%), Positives = 225/545 (41%), Gaps = 103/545 (18%) Query: 88 FINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N ++ ++ + I+S ++ G +YG + IG+G V +E+ S N P HVGH + Sbjct: 77 YLNFFVDKVAFSKNIISKVLEEGDKYGSSKIGEGKNVVVEYSSPNIAKPFHVGHLFTTAI 136 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYYPGV 204 G +L ++ F GY R ++ D G Q L +S + W ++AL + P + Sbjct: 137 GHSLYRMLNFEGYNPIRINHLGDWGTQFGKL-ISAYKRWGNEEAL----EEAPINELLRI 191 Query: 205 YLKHVGKELADKYSSELLNFPE---EKWLPIVK----DYSVQAMMKIIRD-DLKALNIQH 256 Y+ K+ E N PE E + K D A+ + +D LK N + Sbjct: 192 YV---------KFHDEAENNPELEDEGRMYFKKLEDGDQEAVALWERFKDLSLKEFNKIY 242 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST-- 314 D+ + D G+ S D +D + + +++ +L S Sbjct: 243 DMLGVDFDSWAGE-SFYNDKMDTVVEE--------------------LEKANILTESNGA 281 Query: 315 --MVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH----SGYV 364 ++ D+ + P ++KSDG+ Y DLA +++ FD IYV+G D + Sbjct: 282 KVVMLDEYNMPPCIVVKSDGASIYATRDLAAASYRHKTYNFDKCIYVVGKDQILHFNQVF 341 Query: 365 KRLEAVAA-------------------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405 K LE +S +K + VLL +L+ D + ++ Sbjct: 342 KTLELAGNEWAKNCVHIPFGLVKFADRKLSTRKGNV-VLLEDLLNEAIDKTRETIEEKNP 400 Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLD--FDFCKVKE-QSKENPVFYVQYAYARCR 462 V ++G ++ F L KNS D FD+ ++ + + P YVQY+YAR + Sbjct: 401 QLENKEEVAKKIGIGAILFTYL--KNSRERDIVFDWKEMLSFEGETGP--YVQYSYARAK 456 Query: 463 SIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520 SI R+A ++I + DF E +L L + + EP Sbjct: 457 SILRKAEEQNITAEPDFTKLT----------SKEEFELAKTLDGLQKAVVLGIDKLEPSV 506 Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + Y ++A F+ +++ + + L RL+L+ A A +I + L +IG++ Sbjct: 507 VTRYSIEVAKAFNKFYNNH------TVLNVEDEGLKAARLELIKATAQVIKNALFLIGID 560 Query: 581 SPNEM 585 +M Sbjct: 561 VVEKM 565 >gi|307193340|gb|EFN76202.1| Arginyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator] Length = 683 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 143/611 (23%), Positives = 258/611 (42%), Gaps = 104/611 (17%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGK 86 +++ + G N+AM L++ L + P +A I+++++ VD IAG Sbjct: 120 VIVTTSNNLKFGDYQCNSAMPLAQHLSSSGIKVIPRNVANNIISKLEESFLVDKYEIAGP 179 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GFIN+YL + + L+S + G + K +V ++F S N MHVGH R ++ Sbjct: 180 GFINIYLKRDFGQYTLNSWLKKGDVPPPCVQRK--RVIVDFSSPNIAKEMHVGHLRSTII 237 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206 GD+++ L+ + G++V R +I D G Q L + Q N + P P L Sbjct: 238 GDSISRLLEYLGHDVLRINHIGDWGTQFGMLIAHL----QDKFPNYSTVAP----PIQDL 289 Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSV--------QAMMKIIRDDLKALNIQHDI 258 + KE ++ ++ NF + + +VK ++ Q + + R + + L + DI Sbjct: 290 QAFYKESKTRFDTD-ENFKKRAYECVVKLQALEPEITKAWQMICDVSRQEFQKLYTRLDI 348 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 I E RG+ + + E ++ +SK + D RK M G+ Sbjct: 349 KIIE----RGESFYQKHM-----------ELVVKKLESKNMLEEDNGRK------IMWGE 387 Query: 319 DVDR----PLLKSDGSYTYFAADLAYFKCKYERGFDN----MIYVMGSDHSGYVKRLEAV 370 D ++KSDG +TY +D+A K + E + +IYV + S + + LE+ Sbjct: 388 KRDSGIPLTIVKSDGGFTYDTSDMAALKQRIEDERADWASILIYVTDAGQSLHFQMLESC 447 Query: 371 A--AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416 A + + +++ + +V L D K R+GD + L ++DE Sbjct: 448 GRRAGILKSNHRMDHVGFGVV-LGEDKKKFKT--RSGDTVKLIELLDEGLKRALQKLKEK 504 Query: 417 ------------VGSDSVRFM------MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 + +SV + ++ +N E + F F K+ E K N Y+ YA Sbjct: 505 ERDKVLSEEELKMAQESVAYGCIKYADLVHNRNHEYI-FSFDKMLE-DKGNTAVYLLYAL 562 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 R RSI R A ++ D ++ E E E +L L ++P V+ N + Sbjct: 563 TRIRSIARMA-NVTQDELRKHAHDTLVSLEHE---KEWKLAKVLLKFPDVLLNISQDMYL 618 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR----KLTMMRLQLVHAVASIINSGL 574 ++L + Y+++ F + + V+ N K+ M RL L A A ++ Sbjct: 619 HQLCEFCYEISCAFTEFYD------KCYCVEKNQAGEIVKVNMGRLLLTEATAIVMGKCF 672 Query: 575 NIIGVESPNEM 585 ++G++ M Sbjct: 673 ALLGLKPVTRM 683 >gi|288871500|ref|ZP_06117831.2| arginine--tRNA ligase [Clostridium hathewayi DSM 13479] gi|288863223|gb|EFC95521.1| arginine--tRNA ligase [Clostridium hathewayi DSM 13479] Length = 607 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 116/576 (20%), Positives = 233/576 (40%), Gaps = 92/576 (15%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS---GIEYGRNLI 117 P+ IA +V ++ V GFIN+ L YL ++++ G E + + Sbjct: 73 PIDIANEVVEKLSGGDIFSEVNAVMPGFINIKLEAGYLATYMNNMREEDQCGCEKAKTPL 132 Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 + +++ AN P+HVGH R A++G+++ + F G++V + ++ D G Q+ + Sbjct: 133 ----TIIVDYGGANVAKPLHVGHLRSAIIGESIKRMGRFLGHKVIGDVHLGDWGLQMGLI 188 Query: 178 ALSVFWRYQQALYNNDS-------DLP------EGYYPGVYLKHVGKELADKYSSELLNF 224 + R + Y +++ + P E YP K E + E Sbjct: 189 IEELRDRKPELAYFDETYTGEYPKEAPFTIGELEEIYPAASAKSKTDEEFSARAHEATLK 248 Query: 225 PEEKWLP--IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN--- 279 + + P + ++ + + ++ + LN+ D++ E D P I+++ + Sbjct: 249 LQNGYAPYRAIWNHIIDVSVTDLKKNYGNLNVSFDLWKGESDAQAYIPGLIQELEEKKLA 308 Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339 QG + I P SK C + R KSDG+ Y +DL Sbjct: 309 YESQGALVVDIAEPGDSKELPPC-------IIR-------------KSDGAALYSTSDLG 348 Query: 340 YFKCKYERGFDNMIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394 + E+ F Y+ +D H V R+ A V E++ ++ + +D Sbjct: 349 TI-LEREKEFCPDWYIYITDKRQELHFTQVFRVAKKAGFVPEERKMSHLGFGTMNG--KD 405 Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE-----------LLDFDFCKVK 443 G P K R G + L ++ ++ + + +M R SE + + + Sbjct: 406 GKPFKT--RDGGVMRLETLISDIDAAAYEKIMENRTVSEEEALKTSKIVGMAALKYGDLS 463 Query: 444 EQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489 Q+ ++ +F Y+ Y R +SI +A D+ + +++P S Sbjct: 464 NQASKDYIFDMDRFVSFEGNTGPYILYTIVRIKSILAKASDLEVQ---GVCTGDILPAVS 520 Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549 +E L++ L++Y VIE + + P+K+ Y+Y+LA+ F+ + + + Sbjct: 521 ---GAEKDLMLQLSKYNEVIETSFMELAPHKICQYVYELANAFNRFYHD------TKIIA 571 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N K L L+ ++ + ++++G+E+P M Sbjct: 572 EENEKQRASWLSLISLAKDVLTACIDLLGIEAPERM 607 >gi|14601607|ref|NP_148147.1| arginyl-tRNA synthetase [Aeropyrum pernix K1] gi|7674354|sp|Q9YB39|SYR_AERPE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|5105446|dbj|BAA80759.1| arginyl-tRNA synthetase [Aeropyrum pernix K1] Length = 644 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 135/596 (22%), Positives = 225/596 (37%), Gaps = 134/596 (22%) Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 G++N+ L + ++ SG + + +E SANP P+H+GH R + + Sbjct: 86 GYLNIVFDVEKLGDEVFRLLASGWRPSTARTSRPETIVVEHTSANPIHPLHLGHARNSSL 145 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLAL----------------------SVFWR 184 GD LA L+ G+ V R +Y++D G Q +L +V W Sbjct: 146 GDALARLLEARGHRVNRRFYVDDVGRQAVVASLGFKLSGVTPRELASRMGVKVDHAVGWV 205 Query: 185 Y---QQAL-------YNNDSDLPEGYYPGVYLKHVG-KELADKYSSEL--LNFPEEKWLP 231 Y AL + S + E LK G +E+ D+ + L+ PE Sbjct: 206 YAVTHNALETVTARKRGDTSKVDEALSTLARLKERGDREVFDRILEAVGSLDDPEGLVSE 265 Query: 232 IVKDYS-------------VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 +++ Y V A+++ R+ L + D + E D + II+ Sbjct: 266 MMRKYERGEEPEKSLIRGVVSAVLEGFRETLGRFGVDFDDWDWESDLLWS--GLVNKIIE 323 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDR--KQLLFRSTMVGDDVDRP---------LLKS 327 R ++ K D+ R +++L R + P L++S Sbjct: 324 EARRSPFLT-------THKDAIALDIPRIVREVLARDPEAASTIKLPRSLEIPPLILVRS 376 Query: 328 DGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386 DG+ Y DLAY K+ G D +I V+G+D ++ + ++ +N++ Sbjct: 377 DGTTLYTTRDLAYSVYKFRVTGADRVINVIGADQRLPQLQIRLALLGLGYRREALNMMHY 436 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVD--------EV-----GSD------------- 420 + + G +MS R G+++TL +++ EV G+D Sbjct: 437 DYEIVSLPGR--RMSSRRGEYVTLDELLEMAKARSVREVESRNPGADRDWIESTAEKIAV 494 Query: 421 -SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 +VRF ++ + + D ++ + KEN Y+QY YAR SI + +I D Sbjct: 495 GAVRFALVRPGRLKPITLDVERILDL-KENTAPYLQYTYARASSILEKHGEI------DY 547 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA---------- 529 + E + S +L V +P V A P LA YL LA Sbjct: 548 LKAHPASLE---EGSRRELFVEALRFPLVSAKAADDLAPEDLASYLLRLADMFNSWYQKD 604 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 SV H W R + LV V S+I GL ++GVE +M Sbjct: 605 SVIHEEWEGARH----------------AKAALVLLVKSVIGEGLRLLGVEPLEKM 644 >gi|302380344|ref|ZP_07268814.1| arginine--tRNA ligase [Finegoldia magna ACS-171-V-Col3] gi|302311834|gb|EFK93845.1| arginine--tRNA ligase [Finegoldia magna ACS-171-V-Col3] Length = 564 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 130/542 (23%), Positives = 227/542 (41%), Gaps = 90/542 (16%) Query: 83 IAGKG-FINLYLSPSYLRKILSSIVVSGI--EYGRNLIGKGTKVNIEFVSANPTGPMHVG 139 IA G ++N +++ S K++ S++ I ++G + IG G V +F S N P H+G Sbjct: 74 IANVGPYVNFFVNNS---KLVESVLTEAIKDDFGSSHIGVGKNVVFDFSSTNIAKPFHIG 130 Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199 H R V+G+ + ++M + G+ T YI D G Q + +S + ++ N + + E Sbjct: 131 HLRSTVIGNAIRNIMKYQGFNTTGVNYIGDYGTQFGMM-ISAYLKWGDEDKINANPIKEL 189 Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV--KDYSVQAMMKIIRD-DLKALNIQH 256 V + KE + Y E + W + KD + + R+ LK + Sbjct: 190 LNLYVKYNKIAKE-DETYMDEARD-----WFDKLEKKDPTAVKLWSWFREISLKEFQRVY 243 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS--- 313 D+ + D G+ + I D L +D+K LL S Sbjct: 244 DLLGVKFDNFNGESFHSQFIGDALEA---------------------IDKKNLLEESDGA 282 Query: 314 -TMVGDDVDRP---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKR 366 + DD + P + KS+GS TY D+A Y K Y+ F +YV+ S + ++ Sbjct: 283 MIINLDDENLPPVLIKKSNGSSTYLTRDIATAMYRKKTYD--FYKNVYVVASQQKLHFEQ 340 Query: 367 LEAVA----------------AAVSEKKAQIN------VLLCELVRLYRDGMPIKMSKRA 404 L AV VS K + + L +++ D + +R Sbjct: 341 LRAVLKKMGFDWWKDCEHVSFGMVSMKDGSMKTREGKVIFLEDVLNRAIDKTKSIIEERN 400 Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 + V +VG +V F L+ + FD+ +V E Y QY +AR SI Sbjct: 401 PNIENKEEVAKQVGVGAVIFQDLFNNRIKDYTFDWDQVLNFDGETGP-YTQYTFARSCSI 459 Query: 465 FRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 + + ++ + FDL D +E+ ++ HL+++ V+ NAT EP L Sbjct: 460 LDKGEFELKDNSKFDLL----------VDDTEIDIVKHLSKFEEVLLNATEKYEPSFLTR 509 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y +LA +F+ ++ N + V+ +L RL L ++V + L+++G+E+P Sbjct: 510 YTVELAKLFNKFYA----NCPINTVE---DELKYQRLYLTYSVNKCLKLSLSLLGIEAPV 562 Query: 584 EM 585 M Sbjct: 563 RM 564 >gi|323343491|ref|ZP_08083718.1| arginine--tRNA ligase [Prevotella oralis ATCC 33269] gi|323095310|gb|EFZ37884.1| arginine--tRNA ligase [Prevotella oralis ATCC 33269] Length = 606 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 131/572 (22%), Positives = 239/572 (41%), Gaps = 106/572 (18%) Query: 80 SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHV 138 S F KGF+NL ++ S +L+SI +G + + V IE+ S N P+H+ Sbjct: 75 SSFNVVKGFLNLNIARSAWIDLLNSIDTDD-NFGLKIATDSSPLVMIEYSSPNTNKPLHL 133 Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-W---RYQQALYNNDS 194 GH R ++G +LA +M +G V + +ND G I L+ W Q+ Sbjct: 134 GHVRNNLLGWSLARIMEANGNRVVKTNIVNDRGIHICKSMLAWLKWGNGETPQSSGKKGD 193 Query: 195 DLPEGYYPGV--YLKHVGKELADKYSSELLNFPEEK-----WLPIVKDYSVQAMMKIIRD 247 L YY + K K+L +Y ++ ++ E + P++K+ + + ++K ++ Sbjct: 194 HLIGDYYVAFDKHYKEQCKQLEAQYKAQGMSDEEAEKKAATEAPLMKE-AHEMLVKWEQN 252 Query: 248 D--LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 D ++AL + + ++ + + D L G ++ I + K ++ Sbjct: 253 DPEVRALWQKMNTWVY---------AGFNETYDKL---GVCFDKIYYESDTYLVGKAKVE 300 Query: 306 ---RKQLLFR-------STMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYERGF--DNM 352 +K + R + + D +DR LL +SDG+ Y D+ ++ R F D M Sbjct: 301 EGLKKGIFMREADNSVWADLTDDGLDRKLLLRSDGTSVYMTQDIGTATMRF-RDFPIDKM 359 Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINV--------------------------LLC 386 IYV+G++ + + + L + + K + V L+ Sbjct: 360 IYVVGNEQNYHFQVLSILLDRLGFKWGKELVHFSYGMVELPNGKMKSREGTVVDADDLIA 419 Query: 387 ELVRLYRDGMPIKMSKRAGDFITL-----RHVVDEVGSDSVRFMML---WRKN-----SE 433 +V+ RD S G F + R + VG ++++ +L RKN E Sbjct: 420 GMVKEARD-----TSDELGKFKDMSEEEKREIARIVGLGALKYFILKVDARKNMLFNPEE 474 Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493 +DF+ N ++QY YAR RSI R+A D D + + + + Sbjct: 475 SIDFN---------GNTGPFIQYTYARIRSIMRKA-----DADSHIALPEKLDGNAPLNE 520 Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553 E++LI + E+ + A P +A Y Y+L F+ + + AN Sbjct: 521 KEIELIQKMNEFETAVAEAGNNYNPAGIANYCYELTKDFNQFYHD------YSILSANTE 574 Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++RL + VA II +G++++G+E P M Sbjct: 575 EEKIVRLVIAKNVAKIIKNGMDLLGIEVPERM 606 >gi|330928443|ref|XP_003302265.1| hypothetical protein PTT_14014 [Pyrenophora teres f. teres 0-1] gi|311322493|gb|EFQ89647.1| hypothetical protein PTT_14014 [Pyrenophora teres f. teres 0-1] Length = 646 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 135/573 (23%), Positives = 223/573 (38%), Gaps = 112/573 (19%) Query: 89 INLYLSPSYLRKILSSIVV-SGIEYGRNL----------IGKGTKVNIEFVSANPTGPMH 137 I + P L ++ +V+ S +YG N K+ +EF S N P H Sbjct: 107 IGFFFKPETLTSLVVPMVIKSKDDYGFNKNFGLKNPLDPSSGAKKMIVEFSSPNIAKPFH 166 Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL- 196 GH R ++G LA+L +G++V R Y+ D G Q LA+ LY N+ +L Sbjct: 167 AGHLRSTIIGGFLANLYERAGWDVVRMNYLGDWGKQYGVLAIGF------DLYGNEEELV 220 Query: 197 --PEGYYPGVYLK-----HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249 P G+ +Y+K H E E+ EE KD S Q KI + + Sbjct: 221 KNPIGHLYDIYVKVSNVQHQEAEEMKALKEEVAKLNEEG-----KDASEQEN-KIKKIET 274 Query: 250 KALNIQHDIFISEDDFHRGDPSPI------RDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 + ++ Q + G+P + RD+ +Q Y I S +Q D Sbjct: 275 EGIDEQARKYFK--GMVDGEPKALGIWKRFRDLSIEKYKQTYARLNIHYDDYSGESQVKD 332 Query: 304 --MDRKQLLFRSTMVGDDVDRPLL----------------KSDGSYTYFAADLAYFKCKY 345 M+ + V D + ++ K DG+ Y D+ + Sbjct: 333 ESMELAAKIMWEKGVCQDSEGAVIVDLTPHSKKLGKAVIKKKDGTSLYLTRDIGAAIERV 392 Query: 346 ER-GFDNMIYVMGSDHSGYVKRLEAVAAA-----VSEKKAQINVLLCELVRLYRDGMPIK 399 E+ FD MIYV+ S ++ +L + +SEK IN GM + Sbjct: 393 EKYHFDKMIYVVASQQDLHLAQLFKIEELMGRKDISEKCQHINF-----------GMVLG 441 Query: 400 MSKRAGDFITLRHVVDEVG--------SDSVRFMMLW--RKNSELLDFDFCKVKEQSKE- 448 MS R G L ++ +VG ++ ++ + K ++ L V++ + Sbjct: 442 MSTRKGTAKFLDDILRDVGDKMHEVMRTNETKYAQVKDPEKTADTLGISAVMVQDMKGKR 501 Query: 449 --NPVF--------------YVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNVIPQESEF 491 N F Y+QYA+AR SI+R+A D P L + DL + E Sbjct: 502 INNYTFDMDRMTSFEGDTGPYLQYAHARLCSIYRKAVDADPSLEEIDLASAADLSLLKE- 560 Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551 ++L+ LA +P N QEP + YL+ +A + H + V + Sbjct: 561 -DKAVELVRQLASWPDTFVNTLKTQEPTTVLTYLFKMAHALSSSYDHLQ-------VVGS 612 Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 + + + RL L A ++ +G+ ++G+ SP E Sbjct: 613 EKNVLIARLALYVAARQVLYNGMKVLGL-SPVE 644 >gi|110798607|ref|YP_696348.1| arginyl-tRNA synthetase [Clostridium perfringens ATCC 13124] gi|110673254|gb|ABG82241.1| arginyl-tRNA synthetase [Clostridium perfringens ATCC 13124] Length = 565 Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 129/548 (23%), Positives = 229/548 (41%), Gaps = 109/548 (19%) Query: 88 FINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N ++ ++ + I+S ++ G +YG + IG+G V +E+ S N P HVGH + Sbjct: 77 YLNFFVDKVAFSKNIISKVLEEGDKYGSSKIGEGKNVVVEYSSPNIAKPFHVGHLFTTAI 136 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYYPGV 204 G +L ++ F GY R ++ D G Q L +S + W ++AL + P + Sbjct: 137 GHSLYRMLNFEGYNPIRINHLGDWGTQFGKL-ISAYKRWGNEEAL----EEAPINELLRI 191 Query: 205 YLKHVGKELADKYSSELLNFPE---EKWLPIVK----DYSVQAMMKIIRD-DLKALNIQH 256 Y+ K+ E N PE E + K D A+ + +D LK N + Sbjct: 192 YV---------KFHDEAENNPELEDEGRMYFKKLEDGDQEAVALWERFKDLSLKEFNKIY 242 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST-- 314 D+ + D G+ S D +D + + +++ +L S Sbjct: 243 DMLGVDFDSWAGE-SFYNDKMDTVVEE--------------------LEKANILTESNGA 281 Query: 315 --MVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH----SGYV 364 ++ D+ + P ++KSDG+ Y DLA +++ FD IYV+G D + Sbjct: 282 KVVMLDEYNMPPCIVVKSDGASIYATRDLAAASYRHKTYNFDKCIYVVGKDQILHFNQVF 341 Query: 365 KRLEAVAA-------------------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405 K LE +S +K + VLL +L+ D + ++ Sbjct: 342 KTLELAGNEWAKNCVHIPFGLVKFADRKLSTRKGNV-VLLEDLLNEAIDKTRETIEEKNP 400 Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLD--FDFCKVKEQSKENPVFYVQYAYARCRS 463 V ++G ++ F L KNS D FD+ ++ E YVQY+YAR +S Sbjct: 401 QLENKEEVAKKIGIGAILFTYL--KNSRERDIVFDWKEMLSFDGETGP-YVQYSYARAKS 457 Query: 464 IFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI----AQE 517 I R+A ++I + DF + + EF+ LA+ ++ A I E Sbjct: 458 ILRKAEEQNITAEPDF-----TKLTSKEEFE---------LAKTLEGLQKAVILGIDKLE 503 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 P + Y ++A F+ +++ + + L RL+L+ A A +I + L +I Sbjct: 504 PSVVTRYSIEVAKAFNKFYNNH------TVLNVEDEGLKAARLELIKATAQVIKNALFLI 557 Query: 578 GVESPNEM 585 G++ +M Sbjct: 558 GIDVVEKM 565 >gi|256269431|gb|EEU04726.1| Msr1p [Saccharomyces cerevisiae JAY291] Length = 643 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 134/583 (22%), Positives = 235/583 (40%), Gaps = 114/583 (19%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIG 118 DP+ +A + + V G F+ +L YL + + +I++ +YG+ Sbjct: 118 DPVAVANRWAIELSTHGCIGKVCAKGP-FLQFFLDQRYLIQSTVPNILLQKGKYGQKKSR 176 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KV +EF S N P H GH R ++G L++L G+ VTR Y+ D G Q LA Sbjct: 177 HQKKVVVEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEAMGWSVTRMNYLGDWGRQFGLLA 236 Query: 179 LSVFWRY--QQALYNNDSDLPEGYYPGVYLKHVGKELADK---------YSSELLNF--- 224 + F RY ++ L P + VY+K + K+LA + S E F Sbjct: 237 VG-FKRYGDEKTLQKQ----PIQHLFDVYVK-INKDLAKEEINGNSKCGISGEARGFFKN 290 Query: 225 ---PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII--DN 279 +E + I + ++ I+ LNI DIF E + + DI +N Sbjct: 291 LENGDENAIKIWNRFRSLSIHHYIQ-TYSRLNINFDIFSGESQVSKESMNEALDIFRKNN 349 Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL- 338 L ++ +G L +D Q S +G V + KSDG+ Y D+ Sbjct: 350 LVKE---IDGALV-----------IDLTQW---SKRLGRVV---VQKSDGTTLYLTRDVG 389 Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 A + K FD M+YV+ S Y+ + + ++N + ++ GM Sbjct: 390 AAIERKKNLHFDKMVYVISSQQDLYMSQFFMIL-------KKMNFEWAKDLQHINFGMVQ 442 Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWR--------------------------KNS 432 MS R G+ + L ++DE +++ M + K+ Sbjct: 443 GMSTRKGNVVFLDTILDEARDKALQIMENNKMKISQVDNPQRVADLIGVSAIIIQDMKSK 502 Query: 433 ELLDFDFCKVKEQSKENPVF-YVQYAYARCRSIFRQAKDIFPDL----DFDLFPRNVIPQ 487 + +++F + S E Y+QY ++R RS+ R + D D+ DF Sbjct: 503 RINNYEFNWNRMLSFEGDTGPYLQYTHSRLRSLERTSSDFTTDMLIHADF---------- 552 Query: 488 ESEFDTSEL-QLIVHLAEYPRVIENATIAQEPYKLAFYLY----DLASVFHGHWSHGREN 542 S + +L +L+ LA+YP V+ A QEP + YL+ ++S + W G+ Sbjct: 553 -SNLNEPQLVELVRLLAQYPDVLRRAFETQEPATIVTYLFKVCHQVSSCYKKIWVSGKP- 610 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + RL + A ++++ ++++G+ + M Sbjct: 611 ----------ADIAIPRLAVYSASRQVLHNAMSLLGLVPVDRM 643 >gi|316974934|gb|EFV58402.1| arginyl-tRNA synthetase, cytoplasmic [Trichinella spiralis] Length = 1083 Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 125/554 (22%), Positives = 235/554 (42%), Gaps = 126/554 (22%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLG------LDPLTIAELIV----ARIKIDPD---V 78 I+I HG N+ M +++ L + P +AE IV ++++ + + Sbjct: 54 IIITETSSEKHGDYQFNSCMAIAKFLSNSHSTKISPRKVAEEIVNVLMTTVQLEKEKSLI 113 Query: 79 DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138 + + IAG GF+N++L+ + + + + I V+G+ + + +V ++F S N MHV Sbjct: 114 EKIEIAGPGFLNIFLNFNAVHQRIFDIFVNGV---KPPVLPAKRVVVDFSSPNIAKEMHV 170 Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND----S 194 GH R ++GD + L+ F G++V R ++ D G Q L + R+ Y N+ + Sbjct: 171 GHLRSTIIGDCICRLLEFCGFDVLRLNHVGDWGTQFGMLIAHLKDRFPN--YQNEPPHLA 228 Query: 195 DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254 DL Y KE ++ ++ +++ +A+ ++++ L+A Sbjct: 229 DLQSFY----------KESKVRFDAD-------------EEFKSRALKEVVK--LQA--- 260 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 H + +I L+R G + + D RK ++F Sbjct: 261 -----------HEPEQIKAWTLICQLSRHGLL--------------EIDEGRK-IVFPE- 293 Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAA 373 G ++KSDG YTY +DLA K + +E D ++YV+ + + +++ V Sbjct: 294 --GCSTPLTIVKSDGGYTYDTSDLAALKHRLFEEKADWVLYVVDAGQGLHFQQIFTVGKQ 351 Query: 374 V---SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------- 416 + +E ++ + LV L D K R+G+ + L +++E Sbjct: 352 LGWWNENSHRVQHIAFGLV-LGEDKR--KFRTRSGETVKLSDLLEEGMRRSAATLKEKQR 408 Query: 417 ----------VGSDSVRFMMLW-------RKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459 + SV + + RKN + FD K+ E K N Y+ YAY+ Sbjct: 409 DQVLSPKELDIAQRSVAYGCIKYADLSHNRKNDYVFSFD--KMLED-KGNTAVYLLYAYS 465 Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEP 518 R RSI R A ++ + + E FD EL+L+ + ++P ++ + P Sbjct: 466 RMRSISRNA-----NVSRENLQEKIHCGEISFDHPKELKLMKMIIKFPDIMSHVVENFLP 520 Query: 519 YKLAFYLYDLASVF 532 + Y+Y+LA+VF Sbjct: 521 NLICDYIYNLATVF 534 >gi|168207505|ref|ZP_02633510.1| arginyl-tRNA synthetase [Clostridium perfringens E str. JGS1987] gi|168216948|ref|ZP_02642573.1| arginyl-tRNA synthetase [Clostridium perfringens NCTC 8239] gi|170661125|gb|EDT13808.1| arginyl-tRNA synthetase [Clostridium perfringens E str. JGS1987] gi|182380942|gb|EDT78421.1| arginyl-tRNA synthetase [Clostridium perfringens NCTC 8239] Length = 565 Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 129/548 (23%), Positives = 229/548 (41%), Gaps = 109/548 (19%) Query: 88 FINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N ++ ++ + I+S ++ G +YG + IG+G V +E+ S N P HVGH + Sbjct: 77 YLNFFVDKVAFSKNIISKVLEEGDKYGSSKIGEGKNVVVEYSSPNIAKPFHVGHLFTTAI 136 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYYPGV 204 G +L ++ F GY R ++ D G Q L +S + W ++AL + P + Sbjct: 137 GHSLYRMLNFEGYNPIRINHLGDWGTQFGKL-ISAYKRWGNEEAL----EEAPINELLRI 191 Query: 205 YLKHVGKELADKYSSELLNFPE---EKWLPIVK----DYSVQAMMKIIRD-DLKALNIQH 256 Y+ K+ E N PE E + K D A+ + +D LK N + Sbjct: 192 YV---------KFHDEAENNPELEDEGRMYFKKLEDGDQEAVALWERFKDLSLKEFNKIY 242 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST-- 314 D+ + D G+ S D +D + + +++ +L S Sbjct: 243 DMLGVDFDSWAGE-SFYNDKMDTVVEE--------------------LEKANILTESNGA 281 Query: 315 --MVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH----SGYV 364 ++ D+ + P ++KSDG+ Y DLA +++ FD IYV+G D + Sbjct: 282 KVVMLDEYNMPPCIVVKSDGASIYATRDLAAASYRHKTYNFDKCIYVVGKDQILHFNQVF 341 Query: 365 KRLEAVAA-------------------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405 K LE +S +K + VLL +L+ D + ++ Sbjct: 342 KTLELAGNEWAKNCVHIPFGLVKFADRKLSTRKGNV-VLLEDLLNEAIDKTRETIEEKNP 400 Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLD--FDFCKVKEQSKENPVFYVQYAYARCRS 463 V ++G ++ F L KNS D FD+ ++ E YVQY+YAR +S Sbjct: 401 QLENKEEVAKKIGIGAILFTYL--KNSRERDIVFDWKEMLSFDGETGP-YVQYSYARAKS 457 Query: 464 IFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI----AQE 517 I R+A ++I + DF + + EF+ LA+ ++ A I E Sbjct: 458 ILRKAEEQNITAEPDF-----TKLTSKEEFE---------LAKTLEGLQKAVILGIDKLE 503 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 P + Y ++A F+ +++ + + L RL+L+ A A +I + L +I Sbjct: 504 PSVVTRYSIEVAKAFNKFYNNH------TVLNVEDEGLKAARLELIKATAQVIKNALFLI 557 Query: 578 GVESPNEM 585 G++ +M Sbjct: 558 GIDVVEKM 565 >gi|110803183|ref|YP_698948.1| arginyl-tRNA synthetase [Clostridium perfringens SM101] gi|110683684|gb|ABG87054.1| arginine--tRNA ligase [Clostridium perfringens SM101] Length = 565 Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 129/548 (23%), Positives = 229/548 (41%), Gaps = 109/548 (19%) Query: 88 FINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N ++ ++ + I+S ++ G +YG + IG+G V +E+ S N P HVGH + Sbjct: 77 YLNFFVDKVAFSKNIISKVLEEGDKYGSSKIGEGKNVVVEYSSPNIAKPFHVGHLFTTAI 136 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYYPGV 204 G +L ++ F GY R ++ D G Q L +S + W ++AL + P + Sbjct: 137 GHSLYRMLNFEGYNPIRINHLGDWGTQFGKL-ISAYKRWGNEEAL----EEAPINELLRI 191 Query: 205 YLKHVGKELADKYSSELLNFPE---EKWLPIVK----DYSVQAMMKIIRD-DLKALNIQH 256 Y+ K+ E N PE E + K D A+ + +D LK N + Sbjct: 192 YV---------KFHDEAENNPELEDEGRMYFKKLEDGDQEAVALWERFKDLSLKEFNKIY 242 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST-- 314 D+ + D G+ S D +D + + +++ +L S Sbjct: 243 DMLGVDFDSWAGE-SFYNDKMDKVVEE--------------------LEKANILTESNGA 281 Query: 315 --MVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH----SGYV 364 ++ D+ + P ++KSDG+ Y DLA +++ FD IYV+G D + Sbjct: 282 KVVMLDEYNMPPCIVVKSDGASIYATRDLAAASYRHKTYNFDKCIYVVGKDQILHFNQVF 341 Query: 365 KRLEAVAA-------------------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405 K LE +S +K + VLL +L+ D + ++ Sbjct: 342 KTLELAGNEWAKNCVHIPFGLVKFADRKLSTRKGNV-VLLEDLLNEAIDKTRETIEEKNP 400 Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLD--FDFCKVKEQSKENPVFYVQYAYARCRS 463 V ++G ++ F L KNS D FD+ ++ E YVQY+YAR +S Sbjct: 401 QLENKEEVAKKIGIGAILFTYL--KNSRERDIVFDWKEMLSFDGETGP-YVQYSYARAKS 457 Query: 464 IFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI----AQE 517 I R+A ++I + DF + + EF+ LA+ ++ A I E Sbjct: 458 ILRKAEEQEITAEPDF-----TKLTSKEEFE---------LAKTLEGLQKAVILGIDKLE 503 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 P + Y ++A F+ +++ + + L RL+L+ A A +I + L +I Sbjct: 504 PSVVTRYSIEVAKAFNKFYNNH------TVLNVEDEGLKAARLELIKATAQVIKNALFLI 557 Query: 578 GVESPNEM 585 G++ +M Sbjct: 558 GIDVVEKM 565 >gi|259146846|emb|CAY80102.1| Msr1p [Saccharomyces cerevisiae EC1118] Length = 617 Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 134/583 (22%), Positives = 236/583 (40%), Gaps = 114/583 (19%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIG 118 DP+ +A + + V G F+ +L YL + + +I++ +YG+ Sbjct: 92 DPVAVANRWAIELSTHGCIGKVCAKGP-FLQFFLDQRYLIQSTVPNILLQKGKYGQKKSR 150 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KV +EF S N P H GH R ++G L++L G+ VTR Y+ D G Q LA Sbjct: 151 HQKKVVVEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEAMGWSVTRMNYLGDWGRQFGLLA 210 Query: 179 LSVFWRY--QQALYNNDSDLPEGYYPGVYLKHVGKELADK---------YSSELLNF--- 224 + F RY ++ L P + VY+K + +LA + S E +F Sbjct: 211 VG-FKRYGDEKTLQKQ----PIQHLFDVYVK-INMDLAKEEINGNSKCGISGEARSFFKN 264 Query: 225 ---PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII--DN 279 +E + I + ++ I+ LNI DIF E + + DI +N Sbjct: 265 LENGDENAIKIWNRFRSLSIHHYIQ-TYSRLNINFDIFSGESQVSKESMNEALDIFRKNN 323 Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL- 338 L ++ +G L +D Q S +G V + KSDG+ Y D+ Sbjct: 324 LVKE---IDGALV-----------IDLTQW---SKRLGRVV---VQKSDGTTLYLTRDVG 363 Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 A + K FD M+YV+ S Y+ + + ++N + ++ GM Sbjct: 364 AAIERKKNLHFDKMVYVISSQQDLYMSQFFMIL-------KKMNFEWAKDLQHINFGMVQ 416 Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWR--------------------------KNS 432 MS R G+ + L ++DE +++ M + K+ Sbjct: 417 GMSTRKGNVVFLDTILDEARDKALQIMENNKMKISQVDNPQRVADLIGVSAIIIQDMKSK 476 Query: 433 ELLDFDFCKVKEQSKENPVF-YVQYAYARCRSIFRQAKDIFPDL----DFDLFPRNVIPQ 487 + +++F + S E Y+QY ++R RS+ R + D D+ DF Sbjct: 477 RINNYEFNWNRMLSFEGDTGPYLQYTHSRLRSLERTSSDFTTDMLIRADF---------- 526 Query: 488 ESEFDTSEL-QLIVHLAEYPRVIENATIAQEPYKLAFYLY----DLASVFHGHWSHGREN 542 S + +L +L+ LA+YP V+ A QEP + YL+ ++S + W G+ Sbjct: 527 -SNLNEPQLVELVRLLAQYPDVLRRAFETQEPATIVTYLFKVCHQVSSCYKKIWVSGKP- 584 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + RL + A ++++ ++++G+ S + M Sbjct: 585 ----------ADIAIPRLAVYSASRQVLHNAMSLLGLVSVDRM 617 >gi|153854644|ref|ZP_01995894.1| hypothetical protein DORLON_01889 [Dorea longicatena DSM 13814] gi|149752748|gb|EDM62679.1| hypothetical protein DORLON_01889 [Dorea longicatena DSM 13814] Length = 544 Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 131/583 (22%), Positives = 234/583 (40%), Gaps = 107/583 (18%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS---GIEYGRNLI 117 P IAE +VA +K ++ V + GFIN+ L +++ L+ + + GI+ N Sbjct: 11 PFMIAEDVVALLKDSACMEEVEVVKPGFINIRLKKAFVADYLNQMEEAEDLGIQKAEN-- 68 Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 + +++ N P+HVGH R A++G+++ + G+EV + ++ D G Q+ + Sbjct: 69 --PEMIVVDYGGPNVAKPLHVGHLRSAIIGESVKRIARKMGHEVLGDIHLGDWGYQMGLI 126 Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPG-----------VYLKHVGKELADK-------YSS 219 + R + Y ++S EG YP +Y GK D +++ Sbjct: 127 ITELKERKPELPYFDES--FEGEYPKEAPFTISELEEIYPTASGKAKEDDAYRENALHAT 184 Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279 LL + I ++ + + ++ + LN+ D++ E D + I D+ID Sbjct: 185 YLLQNGHRGYRAIW-NHIINVSVSDLKRNYANLNVSFDLWKGESDAQ----AYIPDMIDK 239 Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAA 336 L + G+ +E D+ L+ D + P + KSDG+ Y Sbjct: 240 LKKDGFAHE----------------DQGALVIDVQEETDTKEIPPCMIQKSDGASLYGTT 283 Query: 337 DLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRL-- 391 DLA + E D +IYV+ KR E V S KK I EL L Sbjct: 284 DLATLVQRVEDYHPDKVIYVVD-------KRQELHFTQVFRSAKKTGIVPAETELKFLGF 336 Query: 392 ----YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM--------LWRKNSELLD--- 436 +DG P K R G + L ++ E + + RK + ++ Sbjct: 337 GTMNGKDGKPFKT--REGGVMRLETLISETAEKMYKKISENHAIEEEEARKTANMIGVAA 394 Query: 437 FDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 + + Q+ ++ VF Y+ Y R +SI + + LD Sbjct: 395 LKYGDLSNQASKDYVFDVDRFISFEGNTGPYILYTIVRIKSILHKYQAQGNSLD------ 448 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 + QE+ D E L++ A+Y VI NA P+K+ Y+YDLA+ F+ + Sbjct: 449 GLKVQEAHADC-EKALMLEAAKYNDVIANAFQDLAPHKICAYIYDLANAFNRFYH----- 502 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + N + + L+ ++ ++++G E+P M Sbjct: 503 -ETKILGEENAEKQKSYIALLKVTKDVLEGCIDVLGFEAPERM 544 >gi|114564914|ref|YP_752428.1| arginyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400] gi|122298448|sp|Q07WM5|SYR_SHEFN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|114336207|gb|ABI73589.1| arginyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400] Length = 581 Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 50/147 (34%), Positives = 80/147 (54%), Gaps = 2/147 (1%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 RI ++R +D +HG L+TN AM+L++ +P +A+LI+ + V V IAG GFIN Sbjct: 29 RIQVDRTKDKSHGDLATNLAMMLTKVAKKNPRELAQLIIDTLPASSYVAKVEIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 ++ + L L + S G L K T V +++ S N MHVGH R ++GD++ Sbjct: 89 FFIDDNALANQLQQALTSD-HLGVALPTKQTIV-VDYSSPNLAKEMHVGHLRSTIIGDSV 146 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTL 177 + + G+ V R+ ++ D G Q L Sbjct: 147 VRALEYLGHNVIRQNHVGDWGTQFGML 173 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 17/180 (9%) Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 D TL + VG SV++ L + + F F ++ + N Y+ YAY R IF Sbjct: 419 DEATLTEIARVVGISSVKYADLSKNRTSDYIFSFEQML-SFEGNTAPYLLYAYTRVAGIF 477 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 ++A DI DL + V+ E E D L LA++ V+ T P+ L YL Sbjct: 478 KRATDI--DLSQ---AKIVLEHEKEKD-----LGTKLAQFGEVLTRMTDKGLPHVLCGYL 527 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 Y+LAS F + P L A RL L A + +GL+++G+E+ M Sbjct: 528 YELASEFSSFY---EACPVL---AAETEAQKQSRLLLAQLTAKTLKTGLSLLGIETLERM 581 >gi|302386694|ref|YP_003822516.1| arginyl-tRNA synthetase [Clostridium saccharolyticum WM1] gi|302197322|gb|ADL04893.1| arginyl-tRNA synthetase [Clostridium saccharolyticum WM1] Length = 589 Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 127/578 (21%), Positives = 232/578 (40%), Gaps = 96/578 (16%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS---GIEYGRNLI 117 P IA VA++ SV GFINL L+ YL + + + G E N + Sbjct: 55 PFDIASEAVAKLTGSHVFASVDAVMPGFINLKLNSDYLAEYVDGMAGQEQCGCERTENPM 114 Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 + +++ AN P+HVGH R A++G+++ + F G++V + ++ D G Q+ + Sbjct: 115 ----TIVVDYGGANVAKPLHVGHLRSAIIGESIKRMGRFLGHQVIGDVHLGDWGLQMGLI 170 Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPG-----------VYLKHVGKELADKYSSELLNFPE 226 + R + Y + S EG YP +Y K +D+ S + Sbjct: 171 IEELKDRKPELPYFDPS--FEGEYPKEAPFTIGELEEIYPAASAKAKSDEEFSTRAHDAT 228 Query: 227 EKWLPIVKDYSV--QAMMKIIRDDLK----ALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280 K + Y Q ++++ DLK LN+ D++ E D +P I +I L Sbjct: 229 LKLQNGFRPYRAIWQHIIEVSVADLKNNYGNLNVSFDLWKGESD---AEPY-IAGLIKEL 284 Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAAD 337 QG YE + L+ GD + P + KSDG+ Y +D Sbjct: 285 EDQGLAYE----------------SQGALVVDIAEEGDPKELPPCIVRKSDGAALYSTSD 328 Query: 338 LAYFKCKYERGFDNMIYVMGSD-----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 L + E+ Y+ +D H V R+ A VS+ K + LC Sbjct: 329 LGTI-IEREKEIKPDWYIYLTDKRQELHFVQVFRVAKKAGFVSQDKKMSH--LCFGTMNG 385 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE-----------LLDFDFCK 441 +DG P K R G + L ++ ++ + +M R SE + + Sbjct: 386 KDGKPFKT--RDGGVMRLETLISDISQAAYEKIMENRTVSEKEAEETSKIVGMAALKYGD 443 Query: 442 VKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487 + Q+ ++ VF Y+ Y R +SI + + I + ++ Sbjct: 444 LSNQASKDYVFDMDRFVSFEGNTGPYILYTIVRIKSILAKYQGIEDKYQGE---EKILAA 500 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 +E +E L++ L+ Y ++E P+K+ Y+Y+LA+ F+ + + Sbjct: 501 ATE---AEKDLMLQLSRYNEIMETGFTELAPHKICQYIYELANAFNRFYHD------TKI 551 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++K ++L+ ++N+ + ++G+E+P M Sbjct: 552 ITEEDKKRQASWVRLIGLAKDVLNACIGVLGIEAPERM 589 >gi|270295355|ref|ZP_06201556.1| arginyl-tRNA synthetase [Bacteroides sp. D20] gi|270274602|gb|EFA20463.1| arginyl-tRNA synthetase [Bacteroides sp. D20] Length = 605 Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 141/627 (22%), Positives = 266/627 (42%), Gaps = 120/627 (19%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 ++ +++ + GHL+ L R P A+ I ++ + + F KGF+N Sbjct: 27 QVQLQKTKKEFEGHLTLVVFPFL-RMSKKGPEQTAQEIGEYLQANEPSVAAFNVIKGFLN 85 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDT 149 L ++ S ++L+ I +YG + + V IE+ S N P+H+GH R ++G+ Sbjct: 86 LTIASSAWIELLNGIHADK-QYGIVAVTDNSPLVMIEYSSPNTNKPLHLGHVRNNLLGNA 144 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE----------G 199 LA+++A +G +V + +ND G I L+ W+ Y N + PE G Sbjct: 145 LANIVAANGNKVVKTNIVNDRGIHICKSMLA--WQK----YGN-GETPESSGKKGDHLIG 197 Query: 200 YYPGVYLKHVG---KELADKYSSELLNFPEEKWL-----PIVKDYSVQAMMKIIRDD--L 249 Y + KH KEL K+ SE +N E K P++K+ + + ++K +D + Sbjct: 198 DYYVSFDKHYKAEVKELMAKFQSEGMNEEEAKAKAEAESPLMKE-AREMLVKWEANDPEV 256 Query: 250 KAL--NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-EGILPPPKSKTTQKCDMDR 306 +AL + ++ D+ +R + D + + Y EG K K + + Sbjct: 257 RALWKKMNDWVYAGFDETYR----MMGVTFDKIYYESNTYLEG-----KEKVMEGLE--- 304 Query: 307 KQLLFR-------STMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMG 357 K +R + + G+ +D + LL++DG+ Y D+ K ++ + D MIYV+G Sbjct: 305 KGFFYRKEDGSVWADLTGEGLDHKLLLRADGTSVYMTQDIGTAKLRFADYPIDKMIYVVG 364 Query: 358 SDHS--------------------------GYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 ++ + G V+ E + + L+ E++ Sbjct: 365 NEQNYHFQVLSILLDKLGFEWGKGLVHFSYGMVELPEGKMKSREGTVVDADDLMAEMIDT 424 Query: 392 YRD-----GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML---WRKN-----SELLDFD 438 ++ G ++K D ++ VG ++++ +L RKN E +DF+ Sbjct: 425 AKETSNELGKLDGLTKEEAD-----NIARIVGLGALKYFILKVDARKNMTFNPKESIDFN 479 Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498 N ++QY YAR +S+ R+AK+ ++ L P E E L Sbjct: 480 ---------GNTGPFIQYTYARIQSVLRKAKEAGIEIPAQL------PAGIELSEKEEGL 524 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 I +A++ +++ A P +A Y YDL ++ + ++ N + + Sbjct: 525 IQMVADFAAIVKQAGEDYSPSIIANYTYDLVKEYNQFYHD------FSILREENEAVKVF 578 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 RL L VA ++ G+ ++G+E P+ M Sbjct: 579 RLALSENVAKVVRLGMGLLGIEVPDRM 605 >gi|322711579|gb|EFZ03152.1| arginyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23] Length = 648 Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 128/572 (22%), Positives = 232/572 (40%), Gaps = 107/572 (18%) Query: 75 DPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRN----------LIGKGTKV 123 DP D ++G F++ ++ L + I+ + +G ++G+N L ++ Sbjct: 102 DPLFDKPVLSGH-FMSFFVKGEPLTESIIPLVRKAGKDFGKNRFNGLRDPKDLSSGKKRI 160 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EF S N P H GH R ++G +A+L +G++V R Y+ D G Q LALS Sbjct: 161 IVEFSSPNVAKPFHAGHLRSTIIGSFIANLYEANGWDVVRMNYLGDWGKQYGLLALSYER 220 Query: 184 RYQQALYNNDSDLPEGYYPGVYL----------------KHVGKELADKYSSELLNFPEE 227 + N + P + +Y+ K GK+++ ++ L + Sbjct: 221 NGNEEELNKN---PIDHLFKLYVQINAEMSAEKEAIEEQKKEGKDVSALEANSLDEQARQ 277 Query: 228 KWLPIV-KDYSVQAMMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 + + +D +V A + RD LNIQ D F E S + D + Sbjct: 278 YFRRMTDRDETVLAQWQRFRDLSIARYKETYSRLNIQFDEFSGESQVSEESMSKVADEMK 337 Query: 279 --NLARQ--GYV---YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 N++R+ G V + +LP + K +G V L K DG+ Sbjct: 338 EKNISREDKGAVLVDFTQLLPGKEGKR-----------------LGTTV---LRKRDGTA 377 Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAA-----VSEKKAQINV-- 383 Y D+ +YE+ FD+MIYV+ S ++K+L + +++K IN Sbjct: 378 LYLTRDVCELLGRYEKYNFDHMIYVVASQQDLHLKQLFQIIELLGYKDIAKKCQHINFGL 437 Query: 384 ------------LLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMMLW 428 L ++++ D M M K + + + D +G SV + Sbjct: 438 VLGMSTRKGTVKFLDDILKDCADHMHETMKKNEEKYAQVENPDATADTLGISSVMVQDMS 497 Query: 429 RKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487 K F+ + + P Y+QYA+AR SI R+A D D D +++ + Sbjct: 498 GKRINNYTFNMEAMTSFEGDTGP--YLQYAHARLCSIKRRAN--LTDEDLDSANLSLLKE 553 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 + + ++ L+++P V++N EP + YL+ + V + H + Sbjct: 554 DHA-----VNIVRMLSQWPDVLQNTLKTLEPTTVLTYLFKMTHVISSSYDHLQ------- 601 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 V + R+L R+ L A + + +G+ I+G+ Sbjct: 602 VVGSERELMKSRMALYDAARTTLANGMRILGL 633 >gi|167757738|ref|ZP_02429865.1| hypothetical protein CLOSCI_00069 [Clostridium scindens ATCC 35704] gi|167664620|gb|EDS08750.1| hypothetical protein CLOSCI_00069 [Clostridium scindens ATCC 35704] Length = 588 Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 128/603 (21%), Positives = 241/603 (39%), Gaps = 100/603 (16%) Query: 36 RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95 RP C + N AM ++ P+ IAE + +K ++ V GFIN+ L Sbjct: 33 RPDLCEY---QCNGAMAGAKAYKKAPIMIAEAVAENLKDSRCIEEVNAVKPGFINMKLRN 89 Query: 96 SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155 Y+ L+ + E G + + +++ N P+HVGH R A++G+++ + Sbjct: 90 DYVAGFLNDMGADD-ELGVEKAKEPKMILVDYGGPNVAKPLHVGHLRSAIIGESIKRIAR 148 Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG-----------V 204 G+EV + ++ D G Q+ + + R Q Y +D+ +G YP + Sbjct: 149 KMGHEVLGDIHLGDWGYQMGLIITELRERKPQLPYFDDN--FQGEYPSEAPFTISELEEI 206 Query: 205 YLKHVGKELADK-YSSELLNFP-----EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y K D+ Y E LN + V ++ + + ++ + LN++ D+ Sbjct: 207 YPTASQKAKEDETYREEALNATYLLQNGHRGYTAVWNHIMNISVADLKRNYANLNVEFDL 266 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + E D + I D+I+ L ++GY + +D L+ D Sbjct: 267 WKGEADAQ----AYIPDMIERLKKEGYAH----------------IDEGALVIDVQEETD 306 Query: 319 DVDRP---LLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSGYVKRLEAVAAA 373 + P + KSDG+ Y DLA + E + D +IYV+ D + L+ A+ Sbjct: 307 TKEVPPCMIQKSDGASLYGTTDLATL-VQREADYHPDKIIYVV--DKRQELHFLQVFRAS 363 Query: 374 VSEKKAQINVLLCELVRL------YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 KK I L L +DG P K R G + L +++ E+ + + + Sbjct: 364 ---KKTGIVPEETHLRFLGFGTMNGKDGKPFKT--REGGVMRLENLIAEIEEEMYKKIAE 418 Query: 428 WRKNSE-----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCR 462 R +E + + + Q+ ++ VF Y+ Y R + Sbjct: 419 NRTVAEDEAKETAKIVGMSAIKYGDLSNQASKDYVFDVDRFTSFEGNTGPYILYTIVRIK 478 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 SI + + + + ES + SE L++ +A+Y V+E A P+K+ Sbjct: 479 SILNKYQAQGKSFEG-------LAIESAHNESEKALMLEVAKYNEVMETAYEELAPHKVC 531 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 Y+YD+A+ F+ + + + N + L+ ++ + ++++G E+P Sbjct: 532 AYIYDVANAFNRFYHE------TKILSEENEARQKSYIALLILAKKVLEACIDVLGFEAP 585 Query: 583 NEM 585 M Sbjct: 586 ERM 588 >gi|219685128|ref|ZP_03539948.1| arginine--tRNA ligase [Borrelia garinii Far04] gi|219673224|gb|EED30243.1| arginine--tRNA ligase [Borrelia garinii Far04] Length = 585 Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 146/618 (23%), Positives = 255/618 (41%), Gaps = 96/618 (15%) Query: 11 LKNYLKEIDCKIKVEKKI-LDRIVI--ERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 +KN + I + + K I LD+I I ++P G +S LS+ L L I+E Sbjct: 9 IKNEISIIVANLALSKNIKLDKININIQKPPKSDLGDISI-LIFELSKTLELPIANISEE 67 Query: 68 IVARIKIDPDVDSVFIAGKGFINLYL-SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 I+ +K ++ A ++N+ + Y+ + + YG + K+ +E Sbjct: 68 IIKTLKAKYEIK----AMGPYLNIKIPRKEYINNTIQMVNAQKDSYGTSKYLDNKKIILE 123 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWR 184 F S N P+HVGH R +G++L+ ++ G ++T+ IND G I + LA F Sbjct: 124 FSSPNTNKPLHVGHLRNDAIGESLSRILKAVGAKITKINLINDRGVHICKSMLAYKKFGN 183 Query: 185 Y---QQALYNNDSDLPEGYYPGVYLKHVGK-ELADKYSSELLNFPEEKWLPIVKDYSVQA 240 ++A D + E Y Y K+ + E A+K +LL E+K +K + Sbjct: 184 DITPEKAFKKGDHLIGEFYIE--YNKYSQENENAEKEIQDLLLKWEQKDANTIKLWEKLN 241 Query: 241 MMKI--IRDDLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPP 293 I I++ K NI D I++ + F G ++++ +G+ Y+ I Sbjct: 242 KWAIEGIKETYKITNISFDKIYLESEIFEIG-----KNVVLEGLEKGFCYKREDGAICID 296 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNM 352 S +K + KQ + L++S+G+ Y DL + E FD M Sbjct: 297 LPSDADEKAEAKAKQ-------------KVLIRSNGTSIYLTQDLGNIAIRTKEFNFDEM 343 Query: 353 IYVMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 IYV+GS+ + K L V+ + K Q+ L +V L DG KM R G+ I Sbjct: 344 IYVVGSEQIQHFKNLFFVSEKLGISKNKQLIHLSHGMVNLI-DG---KMKSREGNVIDGD 399 Query: 412 HVVDE-------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446 +++ E + ++ + +L K++ D F K + S Sbjct: 400 NLISELIESIMPEITQKIDNKESAKKNALNIALGAIHYYLL--KSAVHKDILFNKKESLS 457 Query: 447 -KENPVFYVQYAYARCRSIFRQ----AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501 N Y+QY AR SI + + I ++F+L E ++I Sbjct: 458 FTGNSGPYIQYVGARINSILEKYNALSIPIIKKINFELLKH----------EKEWEIIKI 507 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 ++E I A P LA Y Y LA F ++ ++ + NN LT R++ Sbjct: 508 ISELEETIIKAAKDLNPSILANYSYSLAKHFSAYYQ------EVKVIDINNIDLTAARIE 561 Query: 562 LVHAVASIINSGLNIIGV 579 + A+ I + ++++ + Sbjct: 562 FLKAILQTIKNCMHLLNI 579 >gi|18310643|ref|NP_562577.1| arginyl-tRNA synthetase [Clostridium perfringens str. 13] gi|23822195|sp|Q8XJU2|SYR_CLOPE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|18145324|dbj|BAB81367.1| arginine-tRNA ligase [Clostridium perfringens str. 13] Length = 565 Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 129/548 (23%), Positives = 229/548 (41%), Gaps = 109/548 (19%) Query: 88 FINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N ++ ++ + I+S ++ G +YG + IG+G V +E+ S N P HVGH + Sbjct: 77 YLNFFVDKVAFSKNIISKVLEEGDKYGSSKIGEGKNVVVEYSSPNIAKPFHVGHLFTTAI 136 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYYPGV 204 G +L ++ F GY R ++ D G Q L +S + W ++AL + P + Sbjct: 137 GHSLYRMLNFEGYNPIRINHLGDWGTQFGKL-ISAYKRWGNEEAL----EEAPINELLRI 191 Query: 205 YLKHVGKELADKYSSELLNFPE---EKWLPIVK----DYSVQAMMKIIRD-DLKALNIQH 256 Y+ K+ E N PE E + K D A+ + +D LK N + Sbjct: 192 YV---------KFHDEAENNPELEDEGRMYFKKLEDGDQEAVALWERFKDLSLKEFNKIY 242 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST-- 314 D+ + D G+ S D +D + + +++ +L S Sbjct: 243 DMLGVDFDSWAGE-SFYNDKMDKVVEE--------------------LEKANILTESNGA 281 Query: 315 --MVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH----SGYV 364 ++ D+ + P ++KSDG+ Y DLA +++ FD IYV+G D + Sbjct: 282 KVVMLDEYNMPPCIVVKSDGASIYATRDLAAASYRHKTYNFDKCIYVVGKDQILHFNQVF 341 Query: 365 KRLEAVAA-------------------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405 K LE +S +K + VLL +L+ D + ++ Sbjct: 342 KTLELAGNEWAKNCVHIPFGLVKFADRKLSTRKGNV-VLLEDLLNEAIDKTRETIEEKNP 400 Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLD--FDFCKVKEQSKENPVFYVQYAYARCRS 463 V ++G ++ F L KNS D FD+ ++ E YVQY+YAR +S Sbjct: 401 QLENKEEVAKKIGIGAILFTYL--KNSRERDIVFDWKEMLSFDGETGP-YVQYSYARAKS 457 Query: 464 IFRQAKD--IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI----AQE 517 I R+A++ I + DF + + EF+ LA+ ++ A I E Sbjct: 458 ILRKAEEQKITAEPDF-----TKLTSKEEFE---------LAKTLEGLQKAVILGIDKLE 503 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 P + Y ++A F+ +++ + + L RL+L+ A A +I + L +I Sbjct: 504 PSVVTRYSIEVAKAFNKFYNNH------TVLNVEDEGLKAARLELIKATAQVIKNALFLI 557 Query: 578 GVESPNEM 585 G++ +M Sbjct: 558 GIDVVEKM 565 >gi|11271708|pir||T49760 probable cytosolic arginine-tRNA ligase [imported] - Neurospora crassa Length = 647 Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 133/601 (22%), Positives = 245/601 (40%), Gaps = 124/601 (20%) Query: 55 RPLGLDPLTIAELIVARIKIDPDVDSVFI---AGKGFINLYLSPSYL-RKILSSIVVSGI 110 R G P +A+ A+ PD D +F + ++ ++ S L ++ + G Sbjct: 82 RVKGKKPDELAQEWAAKF---PDTDPLFTKPTVSQIHLSFFVKASPLVNAVIPMVQHKGA 138 Query: 111 EYGRNLI---------GKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 EYG N KG K + +EF S N P H GH R ++G L++L A +G++ Sbjct: 139 EYGFNKADGLKDPKDPSKGQKRIIVEFSSPNIAKPFHAGHLRSTIIGGFLSNLYAGAGWD 198 Query: 161 VTREYYINDAGAQINTLALSVFWRY--QQALYNN------------DSDLPEGYYPGVYL 206 V R Y+ D G Q LAL+ + +Y ++AL + ++++ Sbjct: 199 VIRINYLGDWGKQYGLLALA-YEKYGDEEALQKDPINHLFQLYVRINTEMTAEKEELTKR 257 Query: 207 KHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM--------MKIIR--DDLKALNIQH 256 K G++++ + L+ ++ + D A+ + I+R D LNI Sbjct: 258 KEAGEDVS-ALEANSLDEQARRYFKKMTDRDADALAMWKRFRDLSIVRYKDTYARLNIHF 316 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR-KQLLFRSTM 315 D + E + + ++++ + C D+ QL+ S + Sbjct: 317 DEYSGESQVSEEAMNKVGNLMEE-------------------KKICKEDKGAQLIDFSEL 357 Query: 316 V----GDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEA 369 V G +++PL+ K DG+ Y D++ ++E+ FD MIYV+ S ++++L Sbjct: 358 VPGKEGKRLEKPLVRKRDGTALYLTRDISELLGRHEKYNFDKMIYVVASAQDLHLRQLFK 417 Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429 + + K C+ + G+ + MS R G L ++ +V +D + +M Sbjct: 418 IIELLGYKDIADK---CQHINF---GLVLGMSTRKGTVKFLDDILRDV-ADKMHEVMKKN 470 Query: 430 KN-----------SELLDFDFCKVKEQSKE---NPVF--------------YVQYAYARC 461 +N +++L V++ S + N F Y+QYA+AR Sbjct: 471 ENKYSQIEDPLATADVLGISSVMVQDMSGKRINNYTFNMETMTSFEGDTGPYLQYAHARL 530 Query: 462 RSIFRQA---KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 SI R+A + D L +TS + L H+A +P V++N EP Sbjct: 531 NSIRRKAGVSDEELATADLSLLT----------ETSAINLCRHMAGWPDVVKNTLKTLEP 580 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 + YL+ L + + V + +L RL L AV +++ +G+ +IG Sbjct: 581 TTVLTYLFKLTHALSSSYDQLQ-------VVGSEPELMKARLALYTAVQTVLANGMRLIG 633 Query: 579 V 579 + Sbjct: 634 L 634 >gi|261210003|ref|ZP_05924302.1| arginyl-tRNA synthetase [Vibrio sp. RC341] gi|260840949|gb|EEX67486.1| arginyl-tRNA synthetase [Vibrio sp. RC341] Length = 592 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 132/604 (21%), Positives = 242/604 (40%), Gaps = 104/604 (17%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ LG +P A+ ++ + ++ IAG GFIN++ Sbjct: 42 LVRQSAKAQFGDYQANGIMGAAKQLGTNPREFAQKVLDVLNLEGIASKTEIAGPGFINIF 101 Query: 93 LSPSYLRKILSSIVVS---GI--EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 LS +L + + G+ E + ++ ++ + N MHVGH R ++G Sbjct: 102 LSEEFLAAQAEAALADERLGVAPEAPKTIVA-------DYSAPNVAKEMHVGHLRSTIIG 154 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVY 205 D + + F G+ V R +I D G Q L ++ R Q+A +L E +Y Sbjct: 155 DAVVRTLEFLGHNVIRANHIGDWGTQFGML-IANLERVQKASGEVSMELSDLEAFY---- 209 Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSV--QAMMKIIRDDLKALNIQHDIFISED 263 K+L D+ +E++ ++Y V Q D K L + + ++ Sbjct: 210 --RESKKLYDE---------DEQFAETARNYVVKLQGGDAFCLDMWKKL-VDVTMIQNQR 257 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFRSTMV---G 317 ++ R + S R+ + + +Y +LP S K + D Q++F G Sbjct: 258 NYDRLNVSLTRENVMGES----MYNDMLPLIVSDLKAKGLAVEDDGAQVVFLDEFKNKDG 313 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLEA 369 + + + K DG + Y D+A K +YE G D ++Y + S + V++ Sbjct: 314 EPMGVIVQKRDGGFLYTTTDIACAKYRYETLGADRVLYFIDSRQHQHLMQAWTIVRKAGY 373 Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429 + VS + ++L +DG P K RAG + L ++DE D + ++ Sbjct: 374 IPEEVSLEHHAFGMMLG------KDGRPFK--TRAGGTVRLADLLDE-AEDRAK-ALIES 423 Query: 430 KNSEL-----------LDFDFCKVKEQSKE-----------------NPVFYVQYAYARC 461 KN EL + K + SK N Y+QYAY R Sbjct: 424 KNPELSAEEKANIANTVAMAAVKYADLSKHRTTDYVFDWDNMLAFEGNTAPYMQYAYTRV 483 Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 S+F +A +D + ++ E + E LI L ++ +++ +P+ + Sbjct: 484 ASVFAKA-----GVDMNELAGHIQITEEK----EKALIAKLLQFEEAVQSVAREGQPHIM 534 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 YL++LA +F + + A + RL+L A I GL ++G+++ Sbjct: 535 CSYLFELAGIFSSFYEA------CPILVAEQESVKQSRLKLAALTAKTIKQGLALLGIDT 588 Query: 582 PNEM 585 M Sbjct: 589 LERM 592 >gi|260910414|ref|ZP_05917086.1| arginine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295] gi|260635490|gb|EEX53508.1| arginine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295] Length = 605 Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 128/575 (22%), Positives = 235/575 (40%), Gaps = 125/575 (21%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCA 144 KGF+NL ++P+ +L+ I S +G + + + V +E+ S N P+H+GH R Sbjct: 81 KGFLNLTIAPAAWISLLNRID-SEPRFGEKTVNEQSPLVMVEYSSPNTNKPLHLGHVRNN 139 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG----- 199 ++G +LA +M +G V + +ND G I L+ W+ +S +G Sbjct: 140 LLGWSLAQIMEANGNRVVKTNIVNDRGIHICKSMLA--WKKWGNGATPESTGKKGDHLIG 197 Query: 200 -YYPGVYLKHVGKELAD---KYSSELLN-----FPEEKWLPIVK------------DYSV 238 YY + +H ELA+ K+ +E + ++ P++K D V Sbjct: 198 DYYV-AFDQHYRAELAELTAKFKAEGMTDEEAEKRAKEESPLMKEAHDMLVRWEQGDEEV 256 Query: 239 QAMMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290 +A+ K + D KA+ + D E + + L + V EG+ Sbjct: 257 RALWKKMNDWVYQGFDETYKAMGVGFDKIYYESETY-------------LEGKAKVEEGL 303 Query: 291 LPPPKSKTTQKCDMDRKQLLFR-------STMVGDDVDRPLL-KSDGSYTYFAADLAYFK 342 K L FR + + + +D+ LL ++DG+ Y D+ Sbjct: 304 ---------------AKGLFFRKPDGSVWADLSNEGLDQKLLLRADGTSVYMTQDIGTAD 348 Query: 343 CKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI--- 398 ++ + D MIYV+G++ + + + L + + K + ELV + + Sbjct: 349 LRFKDYPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGK------ELVHFSYGMVELPNG 402 Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD--------------FDFCKVKE 444 KM R G + +++E+ S + R K +++ + + +K Sbjct: 403 KMKSREGTVVDADDLMEEMVSAARRTSEELGKFADMTENERNEIARIVGMGALKYFILKV 462 Query: 445 QSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490 +++N +F ++QY YAR RSI R+A + + + P V+P Sbjct: 463 DARKNMLFNPEESIDFNGNTGPFIQYTYARIRSIMRKA-----EAEGIVLP-TVLPDTLP 516 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550 + E+QLI L + V+E A P +A Y Y+L F+ + + A Sbjct: 517 LNEKEVQLIQKLNSFEAVVEQAGKDYSPSGIANYCYELTKDFNQFYHD------YSILNA 570 Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +RL L VA I +G+ ++G+E P M Sbjct: 571 ESGEAKTLRLALAKNVAKTIKNGMQLLGIEVPERM 605 >gi|33239664|ref|NP_874606.1| arginyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|39932096|sp|Q7VE03|SYR_PROMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|33237189|gb|AAP99258.1| Arginyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 603 Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 138/610 (22%), Positives = 250/610 (40%), Gaps = 120/610 (19%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98 G N A+ L+R + P IAE+++ +++ + ++ IAG GFINL L + L Sbjct: 47 GDFQINGALALARIIKKSPRQIAEILIKQLESNEVFKAICLPPEIAGPGFINLTLQNTCL 106 Query: 99 RKILSSIV---VSGIEYGRN--LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 ++S + + G+ + + K V ++F S N MHVGH R ++GD++A + Sbjct: 107 INEITSRLNDDLLGVPLVNDDEITKKLKPVIVDFSSPNIAKEMHVGHLRSTIIGDSIARI 166 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + + GY+V R ++ D G Q L + +AL + + ++G L Sbjct: 167 LNYRGYKVIRLNHVGDWGTQFGMLITHLKEVAPKALTTAN------------VINLGN-L 213 Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI--------------QHDIF 259 + Y F E+++ V + + ++ LKA + + I Sbjct: 214 VEFYKKAKQRFDEDEYFQQCSRNEVVNLQRGNKESLKAWELLCEQSRKEFNKIYDRLKIE 273 Query: 260 ISEDDFHRGDP--SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 ISE RG+ +P ++ +ID+L R G + E D + +F + + Sbjct: 274 ISE----RGESFYNPFLQGVIDDLTRSGLLVED---------------DGAKCVFLNGIN 314 Query: 317 GDDVD-RPLL--KSDGSYTYFAADLAYFKCKYE-----RGFDNMIYVMGSDHSGYVKRLE 368 G D + PL+ K+DG + Y DLA + + + G +IYV S + + + Sbjct: 315 GKDGNPLPLIIQKADGGFNYATTDLAAIRYRLKDQPDGDGAGRIIYVTDSGQANHFAGVF 374 Query: 369 AVA--AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------- 416 VA A ++I + LV+ DG K+ R+G+ + L+ ++DE Sbjct: 375 QVAKRAKWLPSSSRIEHVPFGLVQ-GEDGK--KLKTRSGETVRLKDLLDEAISRAKLDIE 431 Query: 417 ---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455 +G +V++ L + F F ++ + N Y+ Sbjct: 432 RRLNEENRKESQAFIEKVSNTIGIAAVKYADLSQNRITNYQFSFDRML-ALQGNTAPYLL 490 Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515 YA R I R+ D+ ++ F PQ E +LI L ++ VI Sbjct: 491 YAVVRIAGINRKGGDLHSSVNKLNFSE---PQ-------EWRLIRELLKFDEVIIAVEEE 540 Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575 P +L YL++L+ VF+ + + P L+ + + RL L + GLN Sbjct: 541 LLPNRLCNYLFELSQVFNRFYD---QIPVLKAEEPSRS----CRLALCQLTGDTLKKGLN 593 Query: 576 IIGVESPNEM 585 ++G+ + M Sbjct: 594 LLGISTLERM 603 >gi|169342733|ref|ZP_02863774.1| arginyl-tRNA synthetase [Clostridium perfringens C str. JGS1495] gi|169299239|gb|EDS81309.1| arginyl-tRNA synthetase [Clostridium perfringens C str. JGS1495] Length = 565 Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 128/548 (23%), Positives = 229/548 (41%), Gaps = 109/548 (19%) Query: 88 FINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N ++ ++ + I+S ++ G +YG + IG+G V +E+ S N P HVGH + Sbjct: 77 YLNFFVDKVAFSKNIISKVLEEGDKYGSSKIGEGKNVVVEYSSPNIAKPFHVGHLFTTAI 136 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYYPGV 204 G +L ++ F GY R ++ D G Q L +S + W ++AL + P + Sbjct: 137 GHSLYRMLNFEGYNPIRINHLGDWGTQFGKL-ISAYKRWGNEEAL----EEAPINELLRI 191 Query: 205 YLKHVGKELADKYSSELLNFPE---EKWLPIVK----DYSVQAMMKIIRD-DLKALNIQH 256 Y+ K+ E N PE E + K D A+ + +D LK N + Sbjct: 192 YV---------KFHDEAENNPELEDEGRMYFKKLEDGDQEAVALWERFKDLSLKEFNKIY 242 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST-- 314 D+ + D G+ S D +D + + +++ +L S Sbjct: 243 DMLGVDFDSWAGE-SFYNDKMDTVVEE--------------------LEKANILTESNGA 281 Query: 315 --MVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH----SGYV 364 ++ D+ + P ++KSDG+ Y DLA +++ FD IYV+G D + Sbjct: 282 KVVMLDEYNMPPCIVVKSDGASIYATRDLAAASYRHKTYNFDKCIYVVGKDQILHFNQVF 341 Query: 365 KRLEAVAA-------------------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405 K LE +S +K + VLL +L+ D + ++ Sbjct: 342 KTLELAGNEWAKNCVHIPFGLVKFADRKLSTRKGNV-VLLEDLLNEAIDKTRETIEEKNP 400 Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLD--FDFCKVKEQSKENPVFYVQYAYARCRS 463 V ++G ++ F L KNS D FD+ ++ E Y+QY+YAR +S Sbjct: 401 QLENKEEVAKKIGIGAILFTYL--KNSRERDIVFDWKEMLSFDGETGP-YIQYSYARAKS 457 Query: 464 IFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI----AQE 517 I R+A ++I + DF + + EF+ LA+ ++ A I E Sbjct: 458 ILRKAEEQNITAEPDF-----TKLTSKEEFE---------LAKTLEGLQKAVILGIDKLE 503 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 P + Y ++A F+ +++ + + L RL+L+ A A +I + L +I Sbjct: 504 PSVVTRYSIEVAKAFNKFYNNH------TVLNVEDEGLKAARLELIKATAQVIKNALFLI 557 Query: 578 GVESPNEM 585 G++ +M Sbjct: 558 GIDVVEKM 565 >gi|27904724|ref|NP_777850.1| arginyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|29611877|sp|P59483|SYR_BUCBP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|27904121|gb|AAO26955.1| arginyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 578 Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 138/612 (22%), Positives = 245/612 (40%), Gaps = 118/612 (19%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI-DPDVDSVFIAGK-GFI 89 + I R D N + L+ L +P +++ I++ ++ + + A K GFI Sbjct: 27 LAIVRTSDKKVWDYQVNGIIKLANNLNKNPYVLSKYIISNMRYYEYKMYKKITASKLGFI 86 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCRCAVVG 147 N++++ ++L K L+ I+ R I K T NI ++ S N MHVGH R ++G Sbjct: 87 NIFINKTWLEKELTK----KIKSFRLGIKKVTPKNIIIDYSSPNVAKKMHVGHLRSTILG 142 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN--NDSDLPEGYYPGVY 205 D A ++ F G+ V R +I D G + + + YN N DL E Y Sbjct: 143 DATARILEFLGHNVMRINHIGDWGTHFGMII--AYLKQNFISYNEINQLDLNELYQKAKV 200 Query: 206 LKHVGKELADKYSSELLNFPEEK------WLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259 + E + K + ++ ++ W IVK ++ KI + L +H Sbjct: 201 NFDLDSEFSKKTRNYVVKLQKKDKECIRIWKKIVKK-TITENQKIYKKLNVTLTNKH--- 256 Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319 I + F+ D P DII +L + K ++C + ++F + D Sbjct: 257 IVGESFY-NDMLP--DIIQDLKTK-------------KIAKQC--NGAYIVFLNKFKNRD 298 Query: 320 ---VDRPLLKSDGSYTYFAADLAYFK--CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374 + + K DG++ Y DLA K C+ R D ++Y + S Y+K++ +A Sbjct: 299 GAPMGVIIQKQDGAFLYSTIDLACLKYRCEVLRA-DQILYFIDSRQKEYLKQILEIAKKA 357 Query: 375 SEKKAQINV------LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416 I + ++C ++ P S R+G+ I L +++E Sbjct: 358 GYISNNIIIRHNEFGMICS-----KNKRP--FSTRSGNNIILSDLINEAIKRAKKIAKNK 410 Query: 417 ---------------VGSDSVRFMMLWR--------KNSELLDFDFCKVKEQSKENPVFY 453 +G ++++ L + K E+L FD N Y Sbjct: 411 NKNLSNKELEYLSEKIGIGAIKYFDLSKNRLTDYIFKWDEILTFD---------GNTAPY 461 Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513 +QYAY R SIF++ ++ N+I E E +L + L ++ +I + Sbjct: 462 MQYAYIRILSIFKKL-----NISMLKLSGNIILTE----LLENKLAIKLFQFEEIILESL 512 Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573 P+ + YLY+L+ +F + + ++ N K+ RL L A + G Sbjct: 513 QHSAPHIICKYLYELSKIFSKFY------EKCSIYKSKNTKIRKNRLLLSLLTARTLKKG 566 Query: 574 LNIIGVESPNEM 585 L IIG+ + M Sbjct: 567 LFIIGISTIKYM 578 >gi|326803379|ref|YP_004321197.1| arginine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a] gi|326650808|gb|AEA00991.1| arginine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a] Length = 563 Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 90/292 (30%), Positives = 138/292 (47%), Gaps = 60/292 (20%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------ 370 KSDG+ Y DLA Y K Y+ FD +YV+G++ S + K+L+AV Sbjct: 300 KSDGATLYMTRDLAAVFYRKRTYD--FDQCLYVVGNEQSVHFKQLKAVIKEMGYDWYDDI 357 Query: 371 -----------AAAVSEKKAQINVL---LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 +S +K ++ +L L E +RL + +++ + D V + Sbjct: 358 HHIPFGLITQGGKKLSTRKGKVVLLESVLKEAIRLAQK----QINSKNPDLTDKDQVAEA 413 Query: 417 VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +V F L KN L +FDF V+ + + P YVQYA AR +SI R+A P Sbjct: 414 VGVGAVVFHDL--KNDRLNNFDFQLEEVVQFEGETGP--YVQYANARAQSILRKANAGKP 469 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 LD DL Q S D ++ L +P +I A + EP +A Y LA F+ Sbjct: 470 RLD-DL-------QLS--DDESYAVVKQLNRFPEIIAKAYESYEPSVIAKYTLQLAQRFN 519 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R V + +L RL LV+AV+ ++ GL ++GV++P EM Sbjct: 520 KYYAHTR-------VLEEDDQLNA-RLALVYAVSVVLTEGLRLLGVQAPKEM 563 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 6/155 (3%) Query: 29 LDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK 86 LD++ V+E P+ G L+ A IL++ L P IA + ++ D +D V G Sbjct: 21 LDQVEDVLEVPKHEGQGDLAF-PAFILAKSLRQAPQKIASELAGKLS-DELIDHVEAVGP 78 Query: 87 GFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 +IN +L + +L+ I+ YG+ IG G + I+ S N PM +GH R V Sbjct: 79 -YINFFLKADKISAAVLADILDKESAYGQLAIGDGENICIDMSSPNIAKPMSMGHLRSTV 137 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +G+ + +++ ++ R ++ D G Q L ++ Sbjct: 138 IGNAIGNIVEKVSFQPVRINHLGDWGTQFGKLIVA 172 >gi|255279909|ref|ZP_05344464.1| arginine--tRNA ligase [Bryantella formatexigens DSM 14469] gi|255269682|gb|EET62887.1| arginine--tRNA ligase [Bryantella formatexigens DSM 14469] Length = 588 Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 130/608 (21%), Positives = 241/608 (39%), Gaps = 104/608 (17%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 V RP C N AM+ ++ P+ IA+ +VA ++ D GFINL Sbjct: 30 VSNRPDLC---EFQCNGAMVAAKKYKKAPIMIAKDVVAALQGDAMFAMAEAVNPGFINLK 86 Query: 93 LSPSYLRKILSSIVVSGIEYGRNL----IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 LS +L L+ + + NL K K+ +++ AN P+HVGH R A++G+ Sbjct: 87 LSGEFLAGFLNDM-----QADENLSVEKTAKPRKIILDYGGANVAKPLHVGHLRSAIIGE 141 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY---YPGVY 205 ++ + F G+EV + ++ D G Q+ + + R + +Y EGY YP Sbjct: 142 SIKRMGRFMGHEVIGDVHLGDWGLQMGLIITELRRRQPELVY-----FQEGYTGEYPQEA 196 Query: 206 LKHVG--KEL---ADKYSSELLNFPEEKWLPIVKDYSV---------QAMMKIIRDDLKA 251 +G +E+ A K S E + E L K Q +M++ DLK Sbjct: 197 PFTIGDLEEIYPAASKKSKEDEAYRGEA-LEATKQLQQGNPGYRALWQHIMRVSIADLKK 255 Query: 252 ----LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307 LN++ D++ E D P +++ + +G+ +E D+ Sbjct: 256 NYSRLNVEFDLWKGESDAQPYIP----EMVQRMKDEGFAHE----------------DQG 295 Query: 308 QLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY 363 L+ D + P +LKSDG+ Y DLA + + D + Y+ + Sbjct: 296 ALVVDVKEETDTKEIPPCIILKSDGASLYATTDLATIVERMKLYQPDEIFYLTDKRQEMH 355 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 ++ A K + + +DG P K R G + L +++ ++ + Sbjct: 356 FIQVFRTARKTGLVKEDTKLSFLGFGTMNGKDGKPFKT--RDGGVMRLENLIADIEEEMY 413 Query: 423 RFMM--------LWRKNSELLDFDFCK---VKEQSKENPVF--------------YVQYA 457 R +M R+ ++++ K + Q+ ++ VF Y+ Y Sbjct: 414 RKIMDNHEIDPQEARETAKIVGLSAIKYGDLSNQASKDYVFDIDRFTSFEGNTGPYILYT 473 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 R +SI + + + + + + SE L + L + V+ENA Sbjct: 474 IVRIKSILNKYQAAGGSTENGVML-------AAANESEKALCLELGRFNGVMENAFEETA 526 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 P+K+ Y+YDLA+ F+ + + + N + L+ ++ + ++++ Sbjct: 527 PHKICSYIYDLANEFNRFYHE------TKILSEENEAQKASWIALLRLTRRVLETCIDVL 580 Query: 578 GVESPNEM 585 G E+P M Sbjct: 581 GFEAPERM 588 >gi|297799374|ref|XP_002867571.1| arginyl-tRNA synthetase [Arabidopsis lyrata subsp. lyrata] gi|297313407|gb|EFH43830.1| arginyl-tRNA synthetase [Arabidopsis lyrata subsp. lyrata] Length = 590 Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 125/577 (21%), Positives = 223/577 (38%), Gaps = 120/577 (20%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P + + +V + V+S +AG GFIN+ LS ++ K + +++++G++ + Sbjct: 70 PPAVGQALVKSLPTSEMVESCSVAGPGFINVVLSAKWMAKSIENMLINGVDTWAPTLSVK 129 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA-- 178 V ++F S N MHVGH R ++GDTLA ++ +S EV R ++ D G Q L Sbjct: 130 RAV-VDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSNVEVLRRNHVGDWGTQFGMLIEY 188 Query: 179 ------------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 L VF++ + ++ D D E V G + K ++ Sbjct: 189 LFEKFPDTDSVTETAIGDLQVFYKASKHKFDLDEDFKERAQQAVVRLQGGDPVYRKAWAK 248 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280 + + ++ + + V+ K + F+ +P I +I+ L Sbjct: 249 ICDISRTEFAKVYQRLRVELEEK------------------GESFY--NPY-IAKVIEEL 287 Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA- 339 +G V E + +++F + G D+ ++KSDG + Y + DL Sbjct: 288 NSKGLVEES---------------EGARVIF---LEGFDIPLMVVKSDGGFNYASTDLTA 329 Query: 340 -YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS------EKKAQINVLLCELVRLY 392 +++ E+ + +IYV + A + ++N + LV L Sbjct: 330 LWYRLNEEKA-EWIIYVTDVGQQQHFNMFFKAARKAGWLPDNDKTYPRVNHVGFGLV-LG 387 Query: 393 RDGMPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVR 423 DG + RA D + L ++DE VG +V+ Sbjct: 388 EDGK--RFRTRATDVVRLVDLLDEAKTRSKLALIERGKDKEWTPEELDQTAEAVGYGAVK 445 Query: 424 FMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 + L KN+ L ++ F + K N Y+ YA+AR SI R++ D D + Sbjct: 446 YADL--KNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKSGK-----DIDELRK 498 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 D L L HL + +E A P L YLY+L+ + +S+ Sbjct: 499 TGKLALDHADERALGL--HLLRFAETVEEACTNLLPSVLCEYLYNLSEHYTRFYSN---- 552 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 Q N RL L A A ++ +++G+ Sbjct: 553 -----CQVNGSPEETSRLLLCEATAIVMRKCFHLLGI 584 >gi|329964264|ref|ZP_08301365.1| arginine--tRNA ligase [Bacteroides fluxus YIT 12057] gi|328525569|gb|EGF52612.1| arginine--tRNA ligase [Bacteroides fluxus YIT 12057] Length = 605 Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 141/594 (23%), Positives = 252/594 (42%), Gaps = 123/594 (20%) Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK- 122 I E ++A +P V S F KGF+NL ++ S ++L+ I +YG + Sbjct: 63 IGEYLLAN---EPSV-SAFNVIKGFLNLTIASSAWIELLNGIHADK-QYGIVAATDNSPL 117 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V IE+ S N P+H+GH R ++G+ LA+++A +G V + +ND G I L+ Sbjct: 118 VMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNRVVKTNIVNDRGIHICKSMLA-- 175 Query: 183 WRYQQALYNNDSDLPE----------GYYPGVYLKHVG---KELADKYSSELLNFPEEKW 229 W+ Y N + PE G Y + KH KEL K+ E LN E K Sbjct: 176 WQK----YGN-GETPETSGKKGDHLIGDYYVAFDKHYKAEVKELMAKFQREGLNEEEAKA 230 Query: 230 L-----PIVKDYSVQAMMKIIRDD--LKAL--NIQHDIFISEDDFHRGDPSPIRDIIDNL 280 P++K+ + + ++K +D ++AL + ++ D+ +R + D + Sbjct: 231 KAEAESPLMKE-AREMLVKWEANDPEVRALWKKMNDWVYAGFDETYR----MMGVTFDKI 285 Query: 281 ARQGYVY-EGILPPPKSKTTQKCDMDRKQLLFR-------STMVGDDVD-RPLLKSDGSY 331 + Y EG K K + + K +R + + G+ +D + LL++DG+ Sbjct: 286 YYESNTYLEG-----KEKVMEGLE---KGFFYRKEDGSVWADLTGEGLDHKLLLRADGTS 337 Query: 332 TYFAADLAYFKCKY-ERGFDNMIYVMGSDHS--------------------------GYV 364 Y D+ K ++ + D MIYV+G++ + G V Sbjct: 338 VYMTQDIGTAKLRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKGLVHFSYGMV 397 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRD-----GMPIKMSKRAGDFITLRHVVDEVGS 419 + E + + L+ E++ ++ G ++K D ++ VG Sbjct: 398 ELPEGKMKSREGTVVDADDLMAEMIETAKETSNELGKLDGLTKEEAD-----NIARIVGL 452 Query: 420 DSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 ++++ +L RKN E +DF+ N ++QY YAR +S+ R+AK+ Sbjct: 453 GALKYFILKVDARKNMTFNPKESIDFN---------GNTGPFIQYTYARIQSVLRKAKEA 503 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 + P IP E E LI +A++ V++ A P +A Y YDL Sbjct: 504 GI-----VIPAQ-IPANIELSEKEEGLIQMVADFAAVVKQAGEDYSPSVIANYTYDLVKE 557 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + ++ N + + RL L VA ++ G+ ++G+E P+ M Sbjct: 558 YNQFYHD------FSILREENEAVKVFRLALSENVAKVVRLGMGLLGIEVPDRM 605 >gi|15219682|ref|NP_176826.1| arginyl-tRNA synthetase, putative / arginine--tRNA ligase, putative [Arabidopsis thaliana] gi|12322268|gb|AAG51163.1|AC074025_13 arginyl-tRNA synthetase [Arabidopsis thaliana] gi|14030685|gb|AAK53017.1|AF375433_1 At1g66530/F28G11_14 [Arabidopsis thaliana] gi|20334712|gb|AAM16217.1| At1g66530/F28G11_14 [Arabidopsis thaliana] gi|332196400|gb|AEE34521.1| arginyl-tRNA synthetase [Arabidopsis thaliana] Length = 590 Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 127/567 (22%), Positives = 227/567 (40%), Gaps = 100/567 (17%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P + + ++ + V+S IAG GF+N+ LS ++ K + +++V GI+ + Sbjct: 70 PPAVGQALIQSLPTSEMVESCSIAGPGFVNVVLSSKWMAKSIENMLVDGIDTWAPTLSVK 129 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 V ++F S N MHVGH R ++GDTLA ++ +S EV R ++ D G Q L Sbjct: 130 RAV-VDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSKVEVLRRNHVGDWGTQFGMLIEF 188 Query: 181 VFWRY---QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237 +F ++ + DL Y + E +K ++ + P+ + + Sbjct: 189 LFEKFPDTESVTETAIGDLQVFYRESKLKFDLNPEFKEKAQQAVVRL--QGGDPVYRQ-A 245 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 + +I R++ + + I + E +P I ++I+ L+ +G V E SK Sbjct: 246 WAKICEISRNEFAKVYKRLRIELEEKGESFYNPY-IANVIEELSSKGLVEE-------SK 297 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA------------------ 339 +++F + G + ++KSDG + Y + DL Sbjct: 298 GA--------RVIF---IEGFKIPLIVVKSDGGFNYASTDLTALWYRLNEEKAEWIIYVT 346 Query: 340 ----------YFKCKYERGF---DNMIY----------VMGSDHSGYVKRLEAVAAAVSE 376 +FK + G+ D+ Y V+G D+ KR AA V Sbjct: 347 DVGQQQHFDMFFKAARKAGWLPDDDKTYPRVSHVGFGLVLGDDN----KRFRTRAAEV-- 400 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDF----ITLRHVVDEVGSDSVRFMMLWRKNS 432 V L +L+ +D + +R D L + + VG ++++ L Sbjct: 401 ------VRLADLLDEAKDRSKAALIERGKDKEWSPEELDQIAEAVGYGALKYADLKTNRI 454 Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492 F F ++ + V Y+ YA+AR SI R++ D+D +L I + Sbjct: 455 TGYTFSFDQMLNDKGDTAV-YLLYAHARICSIIRKSGK---DID-ELKKTGKIALDH--- 506 Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552 +E L +HL ++ +E A P L YLY L+ F +S+ Q N Sbjct: 507 AAERALGLHLLQFAETVEEACTTLLPNVLCKYLYYLSEEFTKFYSN---------CQVNG 557 Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGV 579 RL L A A ++ +++G+ Sbjct: 558 SAEETSRLLLCEATAIVMRKCFHLLGI 584 >gi|257458399|ref|ZP_05623541.1| arginyl-tRNA synthetase [Treponema vincentii ATCC 35580] gi|257444203|gb|EEV19304.1| arginyl-tRNA synthetase [Treponema vincentii ATCC 35580] Length = 587 Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 144/611 (23%), Positives = 246/611 (40%), Gaps = 124/611 (20%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG-- 87 +RI +E P D G L ++ L P IA ++ +++ DP + GKG Sbjct: 30 ERIGMETPPDPNLGDLGF-PLFSFAKTLRSAPAKIAAELLPKLQADPS-----LKGKGEV 83 Query: 88 -----FINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 +IN++L +IL +I+ YG+ G K+ +EF S N P+H+GH Sbjct: 84 KAVGPYINVFLPKGETAAQILDTIIDRNENYGKTTTLSGKKIMVEFSSPNTNKPLHLGHL 143 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD-LPEGY 200 R +G++L+ ++ FSG ++ + IND G I L+ YQ L+ N D + EG Sbjct: 144 RNDAIGESLSRILQFSGADIYKTNIINDRGVHICKSMLA----YQ--LFGNGIDPVKEGI 197 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEE------KW-------LPIVKDYSVQAMMKIIRD 247 P ++ + + KYS + E+ KW + + K + A+ I+ Sbjct: 198 KPDKFVGDMYVQF-HKYSKDHPEAEEQAQEMLRKWEAGDPETIKLWKKMNGWALQG-IQQ 255 Query: 248 DLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 + D +F D F +G +I++ L ++G Y+ +D Sbjct: 256 TYNRTGVSFDKLFFESDVFRKGRA----EILEGL-KKGIFYK--------DEDGSIWIDL 302 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVK 365 K + F + LL+ DG+ Y D+ ++ E FD +IYV+G++ + K Sbjct: 303 KSIGFEKKL--------LLRGDGTSVYITQDIGLAITRHAEWPFDKLIYVVGNEQIYHFK 354 Query: 366 RLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAG------DFIT------LRH 412 L + + E + + L +V L KM R G D IT L+ Sbjct: 355 VLFYIMKQLGYEWYSGLYHLAYGMVNLPEG----KMKSREGTVVDADDLITELKNSALKE 410 Query: 413 VV-----DEVGS--------------------DSVRFMMLWRKNSELLDFDFCKVKEQSK 447 + D VG+ D+++ M+ SE L F+ Sbjct: 411 IASKGREDAVGNPEEVAEKVALGALHYFLLQVDTIKDMLF--NASESLSFN--------- 459 Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS-ELQLIVHLAEYP 506 N Y+QY AR SI R+A D + + + + ++ E +L+ L E+P Sbjct: 460 GNTGPYIQYMGARISSILRKA-----DTEEGKKAKAGVCKPELLNSDIEWELLKKLEEFP 514 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 ++ A P + YLYDL +F + + P L A N + RL L AV Sbjct: 515 AQVDKAAAQYAPMFITSYLYDLCKLFSRFY---HDCPIL---GAENADVAATRLALAKAV 568 Query: 567 ASIINSGLNII 577 ++ + ++ Sbjct: 569 YIVLKNATGLV 579 >gi|160879680|ref|YP_001558648.1| arginyl-tRNA synthetase [Clostridium phytofermentans ISDg] gi|160428346|gb|ABX41909.1| arginyl-tRNA synthetase [Clostridium phytofermentans ISDg] Length = 624 Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 136/598 (22%), Positives = 247/598 (41%), Gaps = 101/598 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI---AGKGFI 89 ++E P + +G S ++ + P IAE+I +IK+ D + + GF+ Sbjct: 83 LLEVPSNQIYGDYSL-PCFYFTKIFKMAPKLIAEVIKEKIKM-MDTEGILKNLEVVNGFL 140 Query: 90 NLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 NLYL+ ++++K+L ++G G V I++ S N HVGH R ++G+ Sbjct: 141 NLYLNKENHIKKLLFE--GRKEDFGCGKAGLAQTVCIDYSSPNIAKNFHVGHLRTTLIGN 198 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNND-SDLPEGYYPGVYL 206 +L + GY+V R ++ D G Q L ++ W ++A+ +L Y Sbjct: 199 SLYHIYKKLGYQVIRINHLGDWGTQFGKLIVAYQKWSNKEAVEEKGIEELLRIYIKFSKE 258 Query: 207 KHVGKELADKYSSELLNFP--EEKWLPIVKDYSVQAMMKIIRD-DLKALNIQHDIFISED 263 EL ++ S + E++ L I K + +M++ R DL L + D + E Sbjct: 259 SEQNLELEEEARSWFVKMEQGEKEALTIWKWFKEISMIEFERIYDL--LGVSFDYYTGES 316 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323 + P +R++++ +S+ + D+++ D P Sbjct: 317 FYMDKVPDLVRELMEKHLL-----------SESEGAKIVDLNQ-------------FDMP 352 Query: 324 ---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 ++K DGS Y + DLA Y K +Y+ FD IYV G + + +++ V + + Sbjct: 353 PCMIIKKDGSSIYHSRDLAAVLYRKKQYQ--FDKCIYVTGQEQKLHFEQVFKVIELMGYE 410 Query: 378 KAQINVLLCE--LVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416 +Q N++ LVRL +K+S R G+ + ++ E Sbjct: 411 WSQ-NLIHVPYGLVRL----QGVKLSSRTGNIVYAEDILTEAIKRALELIHQKNPNLDQP 465 Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQA- 468 +G ++ F L+ + + +DF + V + P YVQY YAR +SI ++A Sbjct: 466 KEVARKIGIGAIIFHDLFHQRMKDVDFSWEDVLSFEGTTGP--YVQYTYARAKSILKKAE 523 Query: 469 -KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 K ++D L D + L+ ++EY I A EP +A Y Sbjct: 524 NKPKIDEVDVSLLS----------DVTTYSLLKIISEYKESIYEAANRFEPSVIARYTIL 573 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L++ F+ + + + L RL +V I + ++G+E P EM Sbjct: 574 LSTAFNKFYHECN-------ILNADENLRDARLIVVDLTQEITKDAMGLLGIECPEEM 624 >gi|15613397|ref|NP_241700.1| arginine-tRNA ligase [Bacillus halodurans C-125] gi|38372617|sp|Q9KEL8|SYR2_BACHD RecName: Full=Arginyl-tRNA synthetase 2; AltName: Full=Arginine--tRNA ligase 2; Short=ArgRS 2 gi|10173449|dbj|BAB04553.1| arginine-tRNA ligase [Bacillus halodurans C-125] Length = 561 Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 128/545 (23%), Positives = 224/545 (41%), Gaps = 98/545 (17%) Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143 A G++N + + L + S +Y + G G +V I+ S N P +GH R Sbjct: 72 ATGGYVNFFFHRETVAGQLFQEMKSN-QYWQPNSGDGKRVVIDMSSPNIAKPFGIGHLRS 130 Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL---PEGY 200 ++G L L+ +GY+ R ++ D G Q + YQ+ + D DL P Sbjct: 131 TIIGHALYHLLKKTGYDPIRVNHLGDWGTQFGKQIAA----YQR--WGGDVDLKQNPIAS 184 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA---MMKIIRDDLKALNIQHD 257 + +Y++ E A+K E L +W +++ +A +++ L + ++ Sbjct: 185 FLELYVRF--HEEAEK--DESLEDEGREWFKKLEEGDEEADRLWTYFVKESLNEFDRMYN 240 Query: 258 IFISEDDFHRGDP---SPIRDIIDNLARQGYVY--EGILPPPKSKTTQKCDMDRKQLLFR 312 E D+ G+ + ++ L +G + EG L P Sbjct: 241 RLGVEFDYVLGESFYNDQMAPVVKELQEKGLLTCSEGALVVPL----------------- 283 Query: 313 STMVGDDVDRP---LLKSDGSYTYFAADLAY--FKCKYERGFDNMIYVMGSDHSGYVKRL 367 +D D P ++KSDG+ Y DLA ++ ++G + ++YV+G + + + K++ Sbjct: 284 -----EDADLPPCLIVKSDGTSIYATRDLATAIYRHHVQKG-EKLLYVVGGEQTLHFKQV 337 Query: 368 EAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV--------- 417 V + K A Q + L+RL DG KMS R G + L V+++V Sbjct: 338 FHVLKKMGYKWADQCEHITFGLLRL--DGK--KMSTRRGRVVMLEDVLNDVVAHAKAKIK 393 Query: 418 ----------------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF-YVQYAYAR 460 G +V F L K LD +F S E YVQY YAR Sbjct: 394 EKHPNHPHLHEVAEAVGVGAVIFGDL--KQDRRLDVNFRLEDALSFEGETGPYVQYTYAR 451 Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520 +SI R+ + D ++V E L+ L +YP V+ AT A+EP++ Sbjct: 452 IQSILRKGDKLNDSRHMDW--QHVTKDEG------WSLLKVLIQYPNVLIKATEAREPHQ 503 Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 LA Y+ ++ F+ + + A++ + RL L +I + ++GV+ Sbjct: 504 LARYVLTVSKKFNQFYHK-------YVILADDETVRQARLILAERTGEVIADAMAVLGVK 556 Query: 581 SPNEM 585 +P E+ Sbjct: 557 TPEEL 561 >gi|326916235|ref|XP_003204415.1| PREDICTED: probable arginyl-tRNA synthetase, mitochondrial-like [Meleagris gallopavo] Length = 576 Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 133/566 (23%), Positives = 234/566 (41%), Gaps = 101/566 (17%) Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGT-- 121 A+ + ++K D V + G G +N ++ L K +L ++ G YG T Sbjct: 67 AQKLAEKLKCDAVVSEIS-TGPGTVNFTINRELLAKTVLQQVLKDGTRYGTKSELFSTVP 125 Query: 122 --KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 K +EF S N H+GH R ++G+ +A+L G+EVTR Y+ D G Q L + Sbjct: 126 KQKAVVEFSSPNIAKKFHIGHLRSTIIGNFIANLKVALGHEVTRINYLGDWGMQFGLLGV 185 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL-------LNFPEEKWLPI 232 F R+ S P + VY++ + K AD+ + +L L +E+ L + Sbjct: 186 G-FQRFGDKEKLKSS--PLQHLFEVYVQ-INKAAADENTKKLAKDFFKKLEEHDEQALSL 241 Query: 233 VK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 K D+S++ +I K L + D + S + F++ + ++++ +G Sbjct: 242 WKEFRDFSIKEYTRI----YKRLGVHFDEY-SGESFYQEKSQEVLKMLED--------KG 288 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-G 348 +L +K T D+ K+ L + V ++SDG+ Y DLA + + Sbjct: 289 LLQKT-TKGTGVVDLSEKKDLSSLSTV--------IRSDGTSLYITRDLAAAIDRMNKYN 339 Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 +D MIYV +D L +A + +L C+ V G+ M R G+ + Sbjct: 340 WDTMIYVSIND-------LWKESAGFWHMVVPVYLLWCQHVSF---GLVQGMKTRKGEVV 389 Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSEL-------------------------LDFDFCKVK 443 L V+DEV S + M + E+ D+ F + Sbjct: 390 FLEDVLDEVRSRMLENMASAKTTKEVEDPVETAEKVGLAALIIQDFRGLLSSDYQFSWDR 449 Query: 444 E-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 QS+ + ++QY +AR S+ R + P D ++ QE + + ++ HL Sbjct: 450 ALQSRGDTGVFLQYTHARLHSLERMHGN-EPVTDVNV----ACLQEPD----AISILQHL 500 Query: 503 AEYPRVIENATIAQEPYKLAFYLYD---LASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 Y V+ ++ +P + YL LA+V H R P V+ + L R Sbjct: 501 LRYDEVLYRSSQDLQPKHIVSYLLTLSHLAAVAH------RTLP----VKGSTPALAQAR 550 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L A S++ +G+ ++G+ +M Sbjct: 551 LCLFQATRSVLANGMKLLGITPVTQM 576 >gi|296271270|ref|YP_003653902.1| arginyl-tRNA synthetase [Thermobispora bispora DSM 43833] gi|296094057|gb|ADG90009.1| arginyl-tRNA synthetase [Thermobispora bispora DSM 43833] Length = 575 Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 134/590 (22%), Positives = 241/590 (40%), Gaps = 108/590 (18%) Query: 47 TNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIV 106 N A+ L++ L P +A+ ++ +D + ++G GFIN+ LS ++ + + Sbjct: 43 ANIALSLAKRLRRAPRDVAQDLLG--ALDQTGITAEVSGPGFINITLSDEWIAEQAERL- 99 Query: 107 VSGIEYGRNLIGKGT--KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164 ++ R + K T V I++ + N MHVGH R +VGDTLA G V R+ Sbjct: 100 ---LQDERLGVPKVTPQTVVIDYSAPNAAKEMHVGHLRTTIVGDTLARTHEHLGNRVIRQ 156 Query: 165 YYINDAGAQINTL-----------AL--------SVFWRYQQALYNNDSDLPEGYYPGVY 205 ++ D G L AL + F++ + ++ D + E V Sbjct: 157 NHLGDWGTPFGMLIEHLLDVGEEEALRRLAAGEGNAFYQEARKKFDTDPEFEERSRRRVP 216 Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 L G + + E + + + + V AM+ + D +H I+ + Sbjct: 217 LLQGGDPESLRLWGEFIEYTKRYF------NKVYAMLGVTLTD------EH---IAGESM 261 Query: 266 HRGDPSPIRDIIDNLARQGY--VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-DDVDR 322 + +P + D+ D L + G + +G L C +F G D Sbjct: 262 Y--NPM-LADVCDELEKAGIAKISDGAL----------C-------VFPPGFTGRDGAPL 301 Query: 323 PLL--KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAA------ 373 PL+ K DG Y Y DLA + + + D ++YV+G+ S + + + A A Sbjct: 302 PLIIRKRDGGYGYATTDLAAIRYRIRDLKADRILYVVGATQSLHFQMVFATARMAGWLTD 361 Query: 374 -VSEKKAQINVLLCELVRLYR--DGMPIKMSK-------RAGDFITLR--------HVVD 415 + + QI +L +++R G +K++ RA I R + Sbjct: 362 DIRAEHVQIGSVLGSDGKMFRTRSGESVKLTDLLNEAIVRADAVIADRGYEPEVREQIAR 421 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 +VG +V++ L + FDF ++ + N Y+QYA AR RSIFR Sbjct: 422 KVGMGAVKYADLSVSHDSEYVFDFDRMLALTG-NTGPYLQYATARIRSIFRTGS------ 474 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + P +V +E L + L ++ V++ EP++L YL++LA F Sbjct: 475 ---IDPGSVTGPIRLGHPTERALALQLLKFGSVVQAVADLSEPHRLCGYLFELAQAFTAF 531 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + ++A + ++ RL L I+ GL+++G++ P M Sbjct: 532 YEN------CPVLKAEDEEVRRSRLALSALTLRILLQGLDLLGIDVPERM 575 >gi|326334850|ref|ZP_08201051.1| arginine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692887|gb|EGD34825.1| arginine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 589 Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 136/612 (22%), Positives = 250/612 (40%), Gaps = 99/612 (16%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 +D I I++ R G T L + + +P I E + A +K + + KGF Sbjct: 22 IDNIEIQQTRKEFEGDF-TLVLFPLLKYIKANPQEIGEKLGAYLKERTPIVGYNVV-KGF 79 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGR-NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 +NL + SY I +SI+ S +YG+ + V +E+ S N P+H+GH R ++G Sbjct: 80 LNLTIMDSYFLSIFNSIL-SQKDYGKIPVTADAPAVIVEYSSPNTNKPLHLGHIRNNLLG 138 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRYQQALYNN-DSDLPEGYYPGV 204 ++A ++ +G V + IND G I + LA +F + D G Y + Sbjct: 139 FSMAKILEATGKRVYKTQIINDRGIHICKSMLAWQLFGNGETPQSTGIKGDKFVGKYYVL 198 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ--------- 255 + K +++A+ S E+ PI + + Q + + + D + L + Sbjct: 199 FDKAYKEQVAELVSQGKSKEEAERQAPIFQQ-AQQMLRRWEKGDAQILALWKQMNQWVYD 257 Query: 256 ------HDIFISED-DFHRGDPSPI-RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307 H++ +S D +++ + + +DI+ G Y K + D+ + Sbjct: 258 GFEVTYHNLGVSFDRNYYESETYLLGKDIVQKGLESGVFYR------KEDGSVWIDLTEE 311 Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN---MIYVMGSDHSGYV 364 L ++ +L+SDG+ Y DL + E F N MIY +G++ + Sbjct: 312 GL----------DEKLVLRSDGTSVYITQDLGTATKRIEDDFPNITGMIYTVGNEQDYHF 361 Query: 365 KRLEAVAAAVSEKKAQ--------------------------INVLLCELVRLYRDGMPI 398 K L + + A+ + L+ E+V + + G+ Sbjct: 362 KVLFLILQKLGYSWAKNLYHLSYGMVELPNGKMKSREGTVVDADDLMQEMVSVAQ-GLSQ 420 Query: 399 KMSKRAG----DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFY 453 ++ K G L H+ +G ++++ +L + + F+ + + Q P + Sbjct: 421 ELGKLEGYTEQQKQELYHI---IGLGALKYYILKVDPKKKIAFNPEESIDFQGNTGP--F 475 Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513 +QY YAR RSI R K I+ + P + E QLI L +P VI+NA Sbjct: 476 IQYTYARIRSIMR--KGIY----------EISPVYIPLHSKEKQLIKLLMIFPEVIQNAA 523 Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573 P +A Y+YDL F+ + + L + + +R L V +I +G Sbjct: 524 TTYNPALIANYVYDLVKEFNSFYQN------LSILGEEDFLKRALRYHLSSKVGEVIATG 577 Query: 574 LNIIGVESPNEM 585 +++G++ P M Sbjct: 578 FDLLGIQVPERM 589 >gi|195479011|ref|XP_002100732.1| GE16015 [Drosophila yakuba] gi|194188256|gb|EDX01840.1| GE16015 [Drosophila yakuba] Length = 664 Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 137/593 (23%), Positives = 248/593 (41%), Gaps = 93/593 (15%) Query: 43 GHLSTNAAMILSRPL---GLD--PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N AM LS+ L G+ P IA + P ++ + IAG GF+N++LS Y Sbjct: 115 GDYQCNNAMGLSKKLKEKGISKAPRDIATELKGHCPPSPLIEKLEIAGAGFVNVFLSKDY 174 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 LS+++ +G+ + K +V ++F S N MHVGH R ++G++L L+ F Sbjct: 175 AASALSNLLRNGVSPPE--VNK-RRVLVDFSSPNIAKQMHVGHLRSTIIGESLCRLLEFL 231 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELAD 215 ++V R ++ D G Q L + R+ L + SDL Y +E Sbjct: 232 QHDVIRINHLGDWGTQFGMLIAHLEDRFPNYLNESPPISDLQLFYKESKKRFDEDEEFKK 291 Query: 216 KYSSELLNFPEEKWLP-IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP---S 271 + S +++ +K +P +K + + + + R + + + + DI I E RG+ S Sbjct: 292 RAYSRVVSL--QKGVPNSIKAWEL--ICNVSRKEFQTIYERLDISIKE----RGESFYQS 343 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + +++ L +G + + D R+ + T G + ++KSDG + Sbjct: 344 RMLSVVEYLRGKGLL--------------EADEGREIMWPDDTKTG--IPLTIVKSDGGF 387 Query: 332 TYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-- 388 TY +D+A + + E D +IYV+ S S + + A E+ A +N L + Sbjct: 388 TYDTSDMAAIRHRVEEELCDWIIYVVDSGQSTHFNTIFKAA----ERSAILNPLTHRVDH 443 Query: 389 ----VRLYRDGMPIKMSKRAGDFITLRHVVDE-----------VGSDSVRFMMLWRKNSE 433 V L DG K R+GD + L ++DE G D V + E Sbjct: 444 VQFGVVLGEDGKKFKT--RSGDTVKLADLLDEGMKRSLLQLESRGRDKVLTPQELKDAQE 501 Query: 434 LLDF------DFCKVK-----------EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 L + D C + + + N Y+ Y Y R SI R + F +L Sbjct: 502 SLAYGCIKYSDLCHNRISDYIFSFDKMLEDRGNTAVYLLYTYTRICSIARNCGEDFSNLP 561 Query: 477 FDLFPRN-VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 L N V+ E E+ ++ L +H ++ + + L + +++ +VF Sbjct: 562 EILKKTNIVLAHEKEWKLAKTLLKLH-----DILIKCSRELFLHFLCEFCFEVCTVFTEF 616 Query: 536 WSHG---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +N + + N+ R+ L A A+++ I+G++ ++M Sbjct: 617 YDSCYCIEKNKQGDIIAVNHS-----RILLCEATAAVLRQCFYILGLKPVSKM 664 >gi|300771210|ref|ZP_07081086.1| arginine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861] gi|300761880|gb|EFK58700.1| arginine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861] Length = 594 Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 122/582 (20%), Positives = 238/582 (40%), Gaps = 112/582 (19%) Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 + E + +RI P++ S F KGF+N+ LS +Y +L+S +++ ++G G K+ Sbjct: 65 VGEFLQSRI---PEL-SGFNVIKGFLNVSLSDNYWIDLLNSTLLAS-DFG-CFPANGKKL 118 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSV 181 +E+ S N P+H+GH R ++G ++A ++ GY+V + +ND G I + LA Sbjct: 119 MVEYSSPNTNKPLHLGHIRNNLLGYSVAEILKAYGYDVIKANLVNDRGIHICKSMLAWQK 178 Query: 182 FWRYQQ-ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 F + A D G Y ++ K K++ + + +K P++++ Q Sbjct: 179 FGNGETPASSGLKGDHLVGKYYVIFDKEYKKQIDELKAEGQTEEEAKKNAPLIRE--AQE 236 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 M++ + GD I+ + + G+VY G K+ Sbjct: 237 MLQ--------------------QWEAGDQQVIQ-LWSTM--NGWVYSGF---EKTYNQL 270 Query: 301 KCDMDRKQLLFRSTMVGDDV----------------------------DRPLLKSDGSYT 332 D D+ + ++G D+ + +L+ DG+ Sbjct: 271 GVDFDKYYYESNTYLLGKDIIQEGLDSGVFFKKEDNSVWIDLTDEGLDQKLVLRGDGTSV 330 Query: 333 YFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ----------- 380 Y DL + KY E + IYV+G++ + K L + + + A Sbjct: 331 YITQDLGTAQLKYDEFHMNESIYVVGNEQDYHFKVLFLILKKLGKPWASGLFHLSYGMVD 390 Query: 381 ---------------INVLLCELVRLYRDGMPIKMSKRAGDFITLR-HVVDEVGSDSVRF 424 + L+ E+V ++ ++ K G T + + + +G ++++ Sbjct: 391 LPSGKMKSREGTVVDADDLMSEMVETAKERTE-ELGKTDGFSETEKAELYNTIGMGALKY 449 Query: 425 MMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 +L + L FD + V Q P ++QY +AR +S+ +A Sbjct: 450 FLLKVDPKKRLLFDPNESVDFQGHTGP--FIQYTHARIKSVLNKA---------GFSEAT 498 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + + + + E LI L +P VIE + P +LA Y+YD+A +++ + Sbjct: 499 PVTKPASISSYERDLIQVLGNFPVVIEASATEFSPAQLANYIYDVAKLYNKFYHEE---- 554 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++A ++ RL L A +I+ G+N++G++ P M Sbjct: 555 --SILKAEVEEVKNFRLHLSATAARVISKGMNLLGIQVPERM 594 >gi|195941727|ref|ZP_03087109.1| arginyl-tRNA synthetase [Borrelia burgdorferi 80a] Length = 585 Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 125/540 (23%), Positives = 219/540 (40%), Gaps = 92/540 (17%) Query: 88 FINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N+ +S Y+ + + YG + K+ +EF S N P+HVGH R V+ Sbjct: 84 YLNIKISRKEYINNTIQMVNAQKDTYGTSKYLDNKKIILEFSSPNTNKPLHVGHLRNDVI 143 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRY---QQALYNNDSDLPEGYY 201 G++L+ ++ G ++T+ IND G I + LA F ++A D + + Y Sbjct: 144 GESLSRILKAVGAKITKINLINDRGVHICKSMLAYKKFGNGITPEKAFKKGDHLIGDFYV 203 Query: 202 PGVYLKHVGK-ELADKYSSELLNFPEEK-------WLPIVKDYSVQAMMKIIRDDLKALN 253 Y K+ + E A+K +LL E+K W + K ++++ I++ K N Sbjct: 204 K--YNKYSQENENAEKEIQDLLLLWEQKDASTIELWKKLNK-WAIEG----IKETYKITN 256 Query: 254 IQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPPPKSKTTQKCDMDRKQ 308 D I++ + F G ++++ +G+ Y+ I S + +K D KQ Sbjct: 257 TSFDKIYLESEIFEIG-----KNVVLEGLEKGFCYKREDGAICIDLPSDSDEKADTKVKQ 311 Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRL 367 + L++S+G+ Y DL + E F+ MIYV+GS+ + K L Sbjct: 312 -------------KVLIRSNGTSIYLTQDLGNIAVRTKEFNFEEMIYVVGSEQIQHFKSL 358 Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 VA + K + + L + DG KM R G+ I +++ + + M Sbjct: 359 FFVAEKLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNVIDADNLISNLIESIIPEMTQ 415 Query: 428 WRKNSE-----------------LLDFDFCK-VKEQSKENPVF------YVQYAYARCRS 463 +N E LL D K + KE+ F Y+QY AR S Sbjct: 416 KIENKESAKKNALNIALGAIHYYLLKSDIHKDIVFNKKESLSFTGNSGPYIQYVGARINS 475 Query: 464 IFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 I + K + +DF L E ++I ++E I NA P Sbjct: 476 ILEKYKALSIPVMKKIDFKLLKH----------EKEWEIIKIISELEENIINAAKDLNPS 525 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 L Y Y LA F ++ ++ + NN LT R++ + + I + + ++ + Sbjct: 526 ILTSYSYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEFLKTILQTIKNCMYLLNI 579 >gi|306820585|ref|ZP_07454216.1| arginine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551402|gb|EFM39362.1| arginine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 565 Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 136/598 (22%), Positives = 250/598 (41%), Gaps = 89/598 (14%) Query: 25 EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84 +K+I D ++E P + G S LS+ L P IAE + +I+ + + + Sbjct: 20 QKEIYD--ILEVPPNSEMGDFSF-PCFKLSKALRKAPQAIAEELCNKIEKPAFIRQIKVV 76 Query: 85 GKGFINLYL-SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143 G++N YL S + +++ L ++ +Y + + +++ S N P H+GH R Sbjct: 77 S-GYLNFYLDSHTIIKQTLDKVLQEKTDYCKKK-PNNKNIIVDYSSPNIAKPFHIGHIRT 134 Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYP 202 V+G L +L F GY V ++ D G Q L ++ W ++ L P Sbjct: 135 TVIGHALYNLYKFMGYNVIGINHLGDYGTQFGKLIVAYKKWGNEELLKQE----PIKTLL 190 Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIF 259 +Y+K +E D SS L W ++D +A + R++ LK + +D+ Sbjct: 191 ALYVKFHEEEEKD--SS--LTDEARMWFKNLEDGDEEAKKLWSFFREESLKEFSKVYDML 246 Query: 260 ISEDDFHRGD---PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 + D + G+ + +++ L + + S+ T D++ L + +V Sbjct: 247 GIKFDSYNGESFYSDKMPAVLEELKEKNLL-------QSSQGTTIVDLEEYGL--GAALV 297 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVS 375 K+DGS Y DLA K + E F +YV+ S + K+++ V + Sbjct: 298 Q--------KNDGSTLYLTRDLAAAKYRKETYNFYKTLYVVASQQMLHFKQMKQVLKLMG 349 Query: 376 EKKAQ--INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD------------------ 415 A I+V+ +V L +G +S R G+ + L V++ Sbjct: 350 YDWADDCIHVMFG-MVSL-EEGT---LSTRKGNVVFLEDVLNNAINKTRAIIEEKNPNLP 404 Query: 416 -------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF-YVQYAYARCRSIFRQ 467 ++G +V F L NS + D+ F K S + YVQY YAR S+ R+ Sbjct: 405 DIEELSRQIGVGAVIFQEL--ANSRIKDYVFSMEKTLSFDGETGPYVQYTYARACSVIRK 462 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 + DF + + E + +I ++ + V+ + EP+ +A Y+ D Sbjct: 463 SN----GFDFSTANYESLAENEE----AMNIIKIISTFDEVLIKSENKNEPHHIARYVLD 514 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L+ F+ + NP + + ++ RL L AV I + ++I G+++P +M Sbjct: 515 LSQAFNKFY---HSNP----INVDEVEIKKDRLALTLAVTYAIETAMSIFGIQTPKQM 565 >gi|168211451|ref|ZP_02637076.1| arginyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626] gi|170710582|gb|EDT22764.1| arginyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626] Length = 565 Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 126/546 (23%), Positives = 224/546 (41%), Gaps = 105/546 (19%) Query: 88 FINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N ++ K I+S ++ G +YG + IG+G V +E+ S N P HVGH + Sbjct: 77 YLNFFVDKVVFSKNIISKVLEEGDKYGSSKIGEGKNVVVEYSSPNIAKPFHVGHLFTTAI 136 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYYPGV 204 G +L ++ F GY R ++ D G Q L +S + W ++AL + P + Sbjct: 137 GHSLYRMLNFEGYNPIRINHLGDWGTQFGKL-ISAYKRWGNEEAL----EEAPINELLRI 191 Query: 205 YLKHVGKELADKYSSELLNFPE---EKWLPIVK----DYSVQAMMKIIRD-DLKALNIQH 256 Y+ K+ E N PE E + K D A+ + +D LK N + Sbjct: 192 YV---------KFHDEAENNPELEDEGRMYFKKLEDGDAEAVALWERFKDLSLKEFNKIY 242 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST-- 314 D+ + D G+ S D +D + + +++ +L S Sbjct: 243 DMLGVDFDSWAGE-SFYNDKMDTVVEE--------------------LEKANILTESNGA 281 Query: 315 --MVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDH----SGYV 364 ++ D+ + P ++KSDG+ Y DLA +++ FD IYV+G D + Sbjct: 282 KVVMLDEYNMPPCIVVKSDGASIYATRDLAAASYRHKTYNFDKCIYVVGKDQILHFNQVF 341 Query: 365 KRLEAVAA-------------------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405 K LE +S +K + VLL +L+ D + ++ Sbjct: 342 KTLELAGNEWAKNCVHIPFGLVKFADRKLSTRKGNV-VLLEDLLNEAIDKTRETIEEKNP 400 Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 V ++G ++ F L + FD+ ++ E YVQY+YAR +SI Sbjct: 401 QLENKEEVAKKIGIGAILFTYLKNSRERDIVFDWKEMLSFDGETGP-YVQYSYARAKSIL 459 Query: 466 RQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI----AQEPY 519 R+A ++I + DF + + EF+ LA+ ++ A I EP Sbjct: 460 RKAEEQNITAEPDF-----TKLTSKEEFE---------LAKTLEGLQKAVILGIDKLEPS 505 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 + Y ++A F+ +++ + + L RL+L+ A A +I + L +IG+ Sbjct: 506 VVTRYSIEVAKAFNKFYNNH------TVLNVEDEGLKAARLELIKATAQVIKNALFLIGI 559 Query: 580 ESPNEM 585 + +M Sbjct: 560 DVVEKM 565 >gi|301166548|emb|CBW26124.1| arginyl-tRNA synthetase [Bacteriovorax marinus SJ] Length = 585 Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 120/583 (20%), Positives = 239/583 (40%), Gaps = 103/583 (17%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112 L++ P IAE + I+ + G ++N +++P+ L++ V+SG + Sbjct: 56 LAKATKSAPNLIAETLAKSIQSQGIIQEAKNVGP-YLNFFINPAQTGSELTNEVLSGEFF 114 Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172 + L+ + K IE+ N +HVGH R +G+ L + ++ EV Y D+G Sbjct: 115 TKELVSERPKTMIEYSQPNTHKELHVGHMRNLCLGNALVRIKKYADQEVVAVTYPGDSGT 174 Query: 173 QINTLALSVFWRYQQALYNNDSDLPE---GYYPGVYLKHVGKELADKYSSELLNFPEEKW 229 + W + Y+N +PE G + G L D+ +E E+ Sbjct: 175 HV----AKCLWYLK---YHNKESIPETDKGPWLGSIYTKANLLLEDELGTEKEAKNREQL 227 Query: 230 LPIVKDYSVQA-------------MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276 I+K+ ++ ++++++ K +++ D + E + SP ++ Sbjct: 228 TAILKELENESGEYFDLWKETRGWSLEMMKEAYKWADVEFDRWFFESEV----DSPSLEL 283 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336 L +G + K +++ +L F L+KSDG+ Y Sbjct: 284 AKKLYEEGKLV-------KDDGAIGMNLEEDKLGF----------CILIKSDGTGLYATK 326 Query: 337 DLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRD 394 D+A K+E G +N IY++ + + + K++ V + E+ + L V L D Sbjct: 327 DVALAVKKFEEFGVENNIYIVDTRQAFHFKQVFKVLEHIGFEQAKNCHHLQYNFVEL-PD 385 Query: 395 GMPIKMSKRAGDFITLR--------HVVDE--------------------VGSDSVRFMM 426 G MS R G+ + L+ H+ +E + ++ + M Sbjct: 386 GA---MSSRKGNIVPLKDLINQMESHIANEYLSKYQDEWDKEEIAKTSSIIARGAINYGM 442 Query: 427 LWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQ---AKDIFPDLDFDLFPR 482 N+ + FD + +K + P Y+QY YAR S+ + + D+ + DF + Sbjct: 443 TRFDNNRKIVFDMKEWLKLDGETGP--YLQYVYARINSLCTKLGYSSDL--EADFSKLEK 498 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 + SEL L++ ++ + ++ L YL++L +++ ++ E Sbjct: 499 D----------SELALLIKISAFNDIVIQCHEKNSATALCSYLFELGKLYNTFYA---EC 545 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P +A L RL+L +V+ ++ GL+++G+E+P M Sbjct: 546 P---IAKAETETLKNARLKLSKSVSLVMKQGLSLLGIEAPERM 585 >gi|78185701|ref|YP_378135.1| arginyl-tRNA synthetase [Synechococcus sp. CC9902] gi|109895047|sp|Q3AVY5|SYR_SYNS9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|78169995|gb|ABB27092.1| arginyl-tRNA synthetase [Synechococcus sp. CC9902] Length = 590 Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 144/602 (23%), Positives = 232/602 (38%), Gaps = 110/602 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98 G N A+ L++PL P IA IV ++ D +++ IAG GFINL + P L Sbjct: 40 GDFQANGALPLAKPLKQPPRQIATAIVDQLSGDEAFNALCLAPQIAGPGFINLTIRPERL 99 Query: 99 RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158 + L++ + + G ++ V ++F S N MHVGH R ++GD+LA ++ F G Sbjct: 100 AEELAARLGTD-RLGVPVVEDVAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRG 158 Query: 159 YEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS 218 + V R ++ D G Q L +LK V E D Sbjct: 159 HSVLRLNHVGDWGTQFGMLI-------------------------THLKQVAPETLDTAD 193 Query: 219 S----ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE----DDFHRGDP 270 + +L+ F E D QA RD++ L + + D R + Sbjct: 194 AVDLGDLVAFYREAKKRFDDDDDFQATS---RDEVVKLQGGDPVSLKAWGLLCDQSRREF 250 Query: 271 SPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMVGDDVDRPL- 324 + D +D L +G + P + D+ D Q +F + G D + PL Sbjct: 251 QKLYDRLDIRLTERGESFYNPYLPAVLDGLKAVDLLVTDDGAQCVFLEGVTGKDGN-PLP 309 Query: 325 ---LKSDGSYTYFAADLAYFKCKYER-----GFDNMIYVMGSDHSGYVKRLEAVA--AAV 374 K DG + Y DLA + ++ +IYV + + + + VA A Sbjct: 310 VIVQKRDGGFNYATTDLAAIRFRFASPPTGDAAQRVIYVTDAGQANHFAGVFQVAERAGW 369 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 A++ + LV+ DG K+ RAGD + LR ++DE Sbjct: 370 IPDGARLEHVPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVERSEQDLRSRLQEEER 426 Query: 417 -------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463 VG +V++ L + F F ++ + N Y+ YA R Sbjct: 427 TESDAFISHVATTVGLAAVKYADLSQNRLTNYQFSFDRMLAL-QGNTAPYLLYAVVRIAG 485 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ DL N Q SE E L+ L ++ RVI P +L Sbjct: 486 IARKGG--------DLGVSNAALQFSE--PQEWALVRELLKFDRVIVEVEDELLPNRLCS 535 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 YL++L+ VF+ + + ++A L+ RL L A + GL ++G+ + Sbjct: 536 YLFELSQVFNRFYDQ------VPVLKAEPEALS-SRLALCRHTADTLRCGLALLGIPTLE 588 Query: 584 EM 585 M Sbjct: 589 RM 590 >gi|2632106|emb|CAB11469.1| arginyl-tRNA synthetase [Arabidopsis thaliana] Length = 590 Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 123/560 (21%), Positives = 222/560 (39%), Gaps = 86/560 (15%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P + + +V + V+S +AG GFIN+ LS ++ K + ++++ G++ + Sbjct: 70 PPAVGQALVKSLPTSEMVESCSVAGPGFINVVLSAKWMAKSIENMLIDGVDTWAPTLSVK 129 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 V ++F S N MHVGH R ++GDTLA ++ +S EV R ++ D G Q L Sbjct: 130 RAV-VDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSHVEVLRRNHVGDWGTQFGMLIEY 188 Query: 181 VFWRYQQALYNNDS---DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237 +F ++ ++ DL Y + + + +K ++ P+ + Sbjct: 189 LFEKFPDTDSVTETAIGDLQVFYKASKHKFDLDEAFKEKAQQAVVRLQGGD--PVYRKAW 246 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 + + I R + + + + + E +P I +I+ L +G V E Sbjct: 247 AK-ICDISRTEFAKVYQRLRVELEEKGESFYNPH-IAKVIEELNSKGLVEES-------- 296 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA--YFKCKYERGFDNMIYV 355 + +++F + G D+ ++KSDG + Y + DL +++ E+ + +IYV Sbjct: 297 -------EGARVIF---LEGFDIPLMVVKSDGGFNYASTDLTALWYRLNEEKA-EWIIYV 345 Query: 356 MGSDHSGYVKRLEAVAAAVS------EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 + A + ++N + LV L DG + RA D + Sbjct: 346 TDVGQQQHFNMFFKAARKAGWLPDNDKTYPRVNHVGFGLV-LGEDGK--RFRTRATDVVR 402 Query: 410 LRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFC 440 L ++DE VG +V++ L KN+ L ++ F Sbjct: 403 LVDLLDEAKTRSKLALIERGKDKEWTPEELDQTAEAVGYGAVKYADL--KNNRLTNYTFS 460 Query: 441 KVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 + K N Y+ YA+AR SI R++ D D + D L L Sbjct: 461 FDQMLNDKGNTAVYLLYAHARICSIIRKSGK-----DIDELKKTGKLALDHADERALGL- 514 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 HL + +E A P L YLY+L+ F +S+ Q N R Sbjct: 515 -HLLRFAETVEEACTNLLPSVLCEYLYNLSEHFTRFYSN---------CQVNGSPEETSR 564 Query: 560 LQLVHAVASIINSGLNIIGV 579 L L A A ++ +++G+ Sbjct: 565 LLLCEATAIVMRKCFHLLGI 584 >gi|15236164|ref|NP_194360.1| emb1027 (embryo defective 1027); ATP binding / aminoacyl-tRNA ligase/ arginine-tRNA ligase/ nucleotide binding [Arabidopsis thaliana] gi|2632105|emb|CAB11468.1| arginyl-tRNA synthetase [Arabidopsis thaliana] gi|4539426|emb|CAB38959.1| arginyl-tRNA synthetase [Arabidopsis thaliana] gi|7269482|emb|CAB79485.1| arginyl-tRNA synthetase [Arabidopsis thaliana] gi|332659782|gb|AEE85182.1| Arginyl-tRNA synthetase, class Ic [Arabidopsis thaliana] Length = 642 Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 123/560 (21%), Positives = 223/560 (39%), Gaps = 86/560 (15%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P + + +V + V+S +AG GFIN+ LS ++ K + ++++ G++ + Sbjct: 122 PPAVGQALVKSLPTSEMVESCSVAGPGFINVVLSAKWMAKSIENMLIDGVDTWAPTLSVK 181 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 V ++F S N MHVGH R ++GDTLA ++ +S EV R ++ D G Q L Sbjct: 182 RAV-VDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSHVEVLRRNHVGDWGTQFGMLIEY 240 Query: 181 VFWRYQQALYNNDS---DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237 +F ++ ++ DL Y + + + +K ++ P+ + Sbjct: 241 LFEKFPDTDSVTETAIGDLQVFYKASKHKFDLDEAFKEKAQQAVVRLQGGD--PVYRKAW 298 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 + + I R + + + + + E +P I +I+ L +G V E Sbjct: 299 AK-ICDISRTEFAKVYQRLRVELEEKGESFYNPH-IAKVIEELNSKGLVEES-------- 348 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA--YFKCKYERGFDNMIYV 355 + +++F + G D+ ++KSDG + Y + DL +++ E+ + +IYV Sbjct: 349 -------EGARVIF---LEGFDIPLMVVKSDGGFNYASTDLTALWYRLNEEKA-EWIIYV 397 Query: 356 MGSDHSGYVKRLEAVAAAVS------EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 + A + ++N + LV L DG + RA D + Sbjct: 398 TDVGQQQHFNMFFKAARKAGWLPDNDKTYPRVNHVGFGLV-LGEDGK--RFRTRATDVVR 454 Query: 410 LRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDFC 440 L ++DE VG +V++ L KN+ L ++ F Sbjct: 455 LVDLLDEAKTRSKLALIERGKDKEWTPEELDQTAEAVGYGAVKYADL--KNNRLTNYTFS 512 Query: 441 KVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 + K N Y+ YA+AR SI R++ D D + D E L Sbjct: 513 FDQMLNDKGNTAVYLLYAHARICSIIRKSGK-----DIDELKKTGKLALDHAD--ERALG 565 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 +HL + +E A P L YLY+L+ F +S+ Q N R Sbjct: 566 LHLLRFAETVEEACTNLLPSVLCEYLYNLSEHFTRFYSN---------CQVNGSPEETSR 616 Query: 560 LQLVHAVASIINSGLNIIGV 579 L L A A ++ +++G+ Sbjct: 617 LLLCEATAIVMRKCFHLLGI 636 >gi|167752086|ref|ZP_02424213.1| hypothetical protein ALIPUT_00328 [Alistipes putredinis DSM 17216] gi|167660327|gb|EDS04457.1| hypothetical protein ALIPUT_00328 [Alistipes putredinis DSM 17216] Length = 593 Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 135/588 (22%), Positives = 237/588 (40%), Gaps = 121/588 (20%) Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 I E +VA P++ + F KGF+NL L ++ + + +G+ G V Sbjct: 61 IGEYLVANT---PEIKA-FNVIKGFLNLSLDSAFWAARFREVAANDT-FGQ-AAPTGRTV 114 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 IE+ S N P+H+GH R ++G ++A ++ +G +V + +ND G I L+ W Sbjct: 115 MIEYSSPNTNKPLHLGHIRNNLLGYSVAQILKANGNKVIKVNLVNDRGIHICKSMLA--W 172 Query: 184 R-YQQALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 + Y S + + G Y KH ++ + ++ +K PI++ Sbjct: 173 KLYGGGETPASSGMKGDHLVGKYYVEFDKHYKAQIKELVAAGQSEEEAKKNAPIMR---- 228 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 QA + R + K DP I + + + G+VYEG K+ Sbjct: 229 QAQEWLRRWEAK------------------DPE-IYSLWETM--NGWVYEGFDVTYKA-- 265 Query: 299 TQKCDMDR--------------------KQLLFRST-------MVGDDVDRPLL-KSDGS 330 D D+ + + FR + D +D+ LL + DG+ Sbjct: 266 -LGVDFDKVYYESQTYLLGKSLVEEGLARGIFFRKEDGSVWIDLTADGLDQKLLLRGDGT 324 Query: 331 YTYFAADLAY-FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS--EKKAQINVLLCE 387 Y DL F+ E D MIYV+G++ + + + L+ + + E I L Sbjct: 325 SVYMTQDLGTAFRRFEENRLDEMIYVVGNEQNYHFQVLKLILKKLGYDEWSDHIYHLSYG 384 Query: 388 LVRL------YRDGMPIKMSKRAGDFI-TLRHVVDEVG---------SDSVRFMMLWRKN 431 +V L R+G + D + T R + DE+G +D++ M+ Sbjct: 385 MVELPEGKMKSREGTVVDADDLIADMVSTAREMSDELGKLDGCTAQEADAIASMV----- 439 Query: 432 SELLDFDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDF 477 L + +K K+ +F ++QY +AR RSI R+A++ D Sbjct: 440 -GLGALKYFILKVDPKKTMLFDPRESIDFNGNTGPFIQYTHARIRSILRKAEEAGIDFRT 498 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 ++P+E ++LI L EYP ++ A P + Y Y+LA F+G++ Sbjct: 499 QDEAAALLPEE-------IELIKALTEYPATVQAAAANFAPSIVGAYAYELAKSFNGYY- 550 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ L+ R MRL+L VA I + ++G++ P M Sbjct: 551 --HDHSILKEECTTTRD---MRLRLAEQVARTIRLAMALLGIDVPERM 593 >gi|323486738|ref|ZP_08092058.1| hypothetical protein HMPREF9474_03809 [Clostridium symbiosum WAL-14163] gi|323399957|gb|EGA92335.1| hypothetical protein HMPREF9474_03809 [Clostridium symbiosum WAL-14163] Length = 593 Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 126/576 (21%), Positives = 230/576 (39%), Gaps = 88/576 (15%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P+ IA +V ++K + GFIN+ L+P YL ++ + S +YG Sbjct: 55 PIDIANELVEQLKDSSMFSEINAVMPGFINIRLNPEYLAGYVNRMA-SDEKYGLEEAKDP 113 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 + +++ AN P+HVGH R AV+G+++ + + G++ + ++ D G Q+ + Sbjct: 114 ETIIVDYGGANVAKPLHVGHLRAAVIGESIKRICRYMGHKTIGDVHLGDWGLQMGLIIEE 173 Query: 181 VFWRYQQALYNNDS-------DLP------EGYYPGVYLKHVGKELADKYSSELLNFPEE 227 + R + +Y +++ + P E YP K K A + E Sbjct: 174 LHDRQPELVYFDETFQGEYPEEAPFTISELEEIYPTASAKAKEKTEAGEAFKERAQEATF 233 Query: 228 KWLPIVKDYSV--QAMMKIIRDDLKA----LNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281 K K Y +M + DLK L + D++ E D P I D+I+ Sbjct: 234 KLQNGYKPYRAIWNHIMNVSLADLKKNYDNLKVYFDLWKGESDAQPYIPGLINDLIE--- 290 Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADL 338 +G YE L+ GD + P + KSDG+ Y +DL Sbjct: 291 -KGLAYES----------------EGALVVDVAQEGDAKEYPPCIVRKSDGASLYATSDL 333 Query: 339 AY-FKCKYERGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394 A + + E D IYV+ H V R+ A V E I + + ++ Sbjct: 334 ATIIEREKEYQPDRYIYVVDKRQELHFVQVFRVAKKAGIVKEDTQMIFLGFGTMNS--KE 391 Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE-----------LLDFDFCKVK 443 G P K R G + L ++ ++ + + + +K E L + + Sbjct: 392 GGPFKT--RDGGVMRLEQLIRDINGEVYKKIQEKQKVPENEMERTAEIIGLAALKYGDLS 449 Query: 444 EQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489 Q+ ++ VF ++QY R +SI + +++ D + + P +S Sbjct: 450 NQATKDYVFDVERFISFEGNTGPHIQYMIVRIKSILEKYEELKGK---DAERQPIRPAQS 506 Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549 SE +L + L + +IE A P+K+ Y+ DLA F+ + EN + + Sbjct: 507 ---VSEKELQLELCRFGEIIETAFAETAPHKICQYMADLADAFNNFY---LEN---KIIA 557 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + L+ I+++ ++++G+ESP M Sbjct: 558 EEDACKQASFISLITLTKEILDTCMDLLGMESPEHM 593 >gi|33866849|ref|NP_898408.1| arginyl-tRNA synthetase [Synechococcus sp. WH 8102] gi|39932064|sp|Q7U3V8|SYR_SYNPX RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|33639450|emb|CAE08834.1| arginyl-tRNA synthetase [Synechococcus sp. WH 8102] Length = 597 Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 134/548 (24%), Positives = 219/548 (39%), Gaps = 99/548 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98 G N A+ L++PL P IA IV +++ D + IAG GFINL + P L Sbjct: 47 GDFQANGALPLAKPLKQAPRQIATAIVEQLQADSGFTDLCLEPQIAGPGFINLTIRPERL 106 Query: 99 RKILSSIVVSGIE-YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 +S+ + G E G + + V ++F S N MHVGH R ++GD+LA ++ F Sbjct: 107 AAEVSARL--GDERLGVPAVEQAAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFR 164 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADK 216 G+ V R ++ D G Q L + AL D+ DL +L Sbjct: 165 GHTVLRLNHVGDWGTQFGMLITHLKQVAPDALETADAVDL--------------GDLVAF 210 Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD---LKALNIQHDIFISEDDFHRGDPSPI 273 Y F +++ + S + ++K+ D LKA + D S +F + I Sbjct: 211 YREAKKRFDDDEAF---QSTSREEVVKLQGGDPVSLKAWGLLCD--QSRREFQK-----I 260 Query: 274 RDIID-NLARQGYVYEGILPPPKSKTTQKCDM----DRKQLLFRSTMVGDDVDRPL---- 324 D +D L +G + P + ++ D Q +F + G D +PL Sbjct: 261 YDRLDIRLNERGESFYNPFLPAVIDGLKAAELLVTDDGAQCVFLEGVQGKD-GKPLPVIV 319 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDN-----MIYVMGSDHSGYVKRLEAVA--AAVSEK 377 KSDG + Y DLA + ++ D ++YV + + + + VA A Sbjct: 320 QKSDGGFNYATTDLAAIRYRFGAAPDGDGARRVVYVTDAGQANHFAGVFQVAERAGWIPD 379 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416 A++ + LV+ DG K+ RAGD + LR ++DE Sbjct: 380 GARLEHVPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVERAETDLRSRLKEEERSES 436 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466 VG +V++ L + F F ++ + N Y+ YA R I R Sbjct: 437 EEFIQNVAGTVGLAAVKYADLSQNRITNYQFSFDRMLA-LQGNTAPYLLYAVVRIAGIAR 495 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 + D+ V + +F + E L+ L ++ VI P +L YL Sbjct: 496 KGGDL-----------EVSTGQLQFSEPQEWALVRELLKFDSVIAEVEEELLPNRLCSYL 544 Query: 526 YDLASVFH 533 ++L+ VF+ Sbjct: 545 FELSQVFN 552 >gi|312149088|gb|ADQ29159.1| arginyl-tRNA synthetase [Borrelia burgdorferi N40] Length = 585 Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 121/535 (22%), Positives = 218/535 (40%), Gaps = 82/535 (15%) Query: 88 FINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N+ +S Y+ + + YG + K+ +EF S N P+HVGH R V+ Sbjct: 84 YLNIKISRKEYINNTIQMVNTQKDTYGTSKYLDNKKIILEFSSPNTNKPLHVGHLRNDVI 143 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRY---QQALYNNDSDLPEGYY 201 G++L+ ++ G ++T+ IND G I + LA F ++A D + + Y Sbjct: 144 GESLSRILKAVGAKITKINLINDRGVHICKSMLAYKKFGNGITPEKAFKKGDHLIGDFYV 203 Query: 202 PGVYLKHVGK-ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI--IRDDLKALNIQHD- 257 Y K+ + E A+K +LL E+K + ++ + I I++ + N D Sbjct: 204 K--YNKYSQENENAEKEIQDLLLLWEQKDVSTIELWKKLNKWAIEGIKETYEITNTSFDK 261 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPPPKSKTTQKCDMDRKQLLFRS 313 I++ + F G ++++ +G+ Y+ I S + +K D KQ Sbjct: 262 IYLESEIFKIG-----KNVVLEGLEKGFCYKREDGAICIDLPSDSDEKADTKVKQ----- 311 Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAA 372 + L++S+G+ Y DL + E F+ MIYV+GS+ + K L VA Sbjct: 312 --------KVLIRSNGTSIYLTQDLGNIAVRTKEFNFEEMIYVVGSEQIQHFKSLFFVAE 363 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 + K + + L + DG KM R G+ I +++ + + M +N Sbjct: 364 KLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNVIDADNLISNLIESIIPEMTQKIENK 420 Query: 433 E----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQA 468 E L + +K ++ VF Y+QY AR SI + Sbjct: 421 ESAKKNALNIALGAIHYYLLKSAIHKDIVFNKKESLSFTGNSGPYIQYVGARINSILEKY 480 Query: 469 KD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 K + +DF+L E ++I ++E I NA P L Y Sbjct: 481 KALSIPVMEKIDFELLKH----------EKEWEIIKIISELEENIINAAKDLNPSILTSY 530 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 Y LA F ++ ++ + NN LT R++ + A+ I + + ++ + Sbjct: 531 SYSLAKHFSTYYQ------EVKIIDTNNINLTAARIEFLKAILQTIKNCMYLLNI 579 >gi|323692123|ref|ZP_08106367.1| arginyl-tRNA synthetase [Clostridium symbiosum WAL-14673] gi|323503810|gb|EGB19628.1| arginyl-tRNA synthetase [Clostridium symbiosum WAL-14673] Length = 593 Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 127/576 (22%), Positives = 231/576 (40%), Gaps = 88/576 (15%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P+ IA +V ++K + GFIN+ L+P YL ++ + S +YG Sbjct: 55 PIDIANELVEQLKDSSMFSEINAVMPGFINIRLNPEYLAGYVNRMA-SDEKYGLEEAKDP 113 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 + +++ AN P+HVGH R AV+G+++ + + G++ + ++ D G Q+ + Sbjct: 114 ETIIVDYGGANVAKPLHVGHLRAAVIGESIKRICRYMGHKTIGDVHLGDWGLQMGLIIEE 173 Query: 181 VFWRYQQALYNNDS-------DLP------EGYYPGVYLKHVGKELADKYSSELLNFPEE 227 + R + +Y +++ + P E YP K K A + E Sbjct: 174 LHDRQPELVYFDETFQGEYPEEAPFTISELEEIYPTASAKAKEKTEAGEAFKERAQEATF 233 Query: 228 KWLPIVKDYSV--QAMMKIIRDDLKA----LNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281 K K Y +M + DLK L + D++ E D P I D+I+ Sbjct: 234 KLQNGYKPYRAIWNHIMNVSLADLKKNYDNLKVYFDLWKGESDAQPYIPGLINDLIE--- 290 Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADL 338 +G YE L+ GD + P + KSDG+ Y +DL Sbjct: 291 -KGLAYES----------------EGALVVDVAQEGDAKEYPPCIVRKSDGASLYATSDL 333 Query: 339 AY-FKCKYERGFDNMIYVMGSD---HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394 A + + E D IYV+ H V R+ A V E I + + ++ Sbjct: 334 ATIIEREKEYQPDRYIYVVDKRQELHFVQVFRVAKKAGIVKEDTQMIFLGFGTMNS--KE 391 Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE-----------LLDFDFCKVK 443 G P K R G + L ++ ++ + + + +K E L + + Sbjct: 392 GGPFKT--RDGGVMRLEQLIRDINGEVYKKIQEKQKVPENEMERTAEIIGLAALKYGDLS 449 Query: 444 EQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489 Q+ ++ VF ++QY R +SI + +++ D + P + P +S Sbjct: 450 NQATKDYVFDVERFISFEGNTGPHIQYMIVRIKSILEKYEEL-KGKDAEWQP--IRPAQS 506 Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549 SE +L + L + +IE A P+K+ Y+ DLA F+ + EN + + Sbjct: 507 ---VSEKELQLELCRFGEIIETAFAETAPHKICQYMADLADAFNNFY---LEN---KIIA 557 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + L+ I+++ ++++G+ESP M Sbjct: 558 EEDACKQASFISLITLTKEILDTCMDLLGMESPEHM 593 >gi|297738741|emb|CBI27986.3| unnamed protein product [Vitis vinifera] Length = 691 Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 127/550 (23%), Positives = 227/550 (41%), Gaps = 118/550 (21%) Query: 87 GFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 GF+N+ LS S++ K + +++ GIE + L K + ++F S N MHVGH R + Sbjct: 197 GFVNIKLSTSWIAKNIQKMLIIGIETWAPRLPIK--RAVVDFSSPNIAKEMHVGHLRSTI 254 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-----WRYQQALYNNDSDLPEGY 200 +GDTLA ++ FS +V R ++ D G Q L +F W + A Sbjct: 255 IGDTLARMLEFSNVDVLRRNHVGDWGTQFGMLIEFLFDKFPNWEHASA------------ 302 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF- 259 + +G +L + Y + F E+ P K + QA++++ + I Sbjct: 303 ------QAIG-DLQEFYKASKKRFDED---PAFKGRAQQAVVRLQGGETSYRRAWAQICE 352 Query: 260 ISEDDFH------------RGDP--SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 IS ++F+ +G+ +P I +I+ L+ QG V E S+ + + Sbjct: 353 ISRNEFNKVYQRLGVQLEEKGESFYNPYIPGVIEQLSNQGLVEE-------SQGARVIHI 405 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA--YFKCKYERGFDNMIYVMGSDHSG 362 + G ++ ++KSDG Y Y + D+A +++ E+ + +IYV Sbjct: 406 E-----------GVNIPLIVVKSDGGYNYASTDMAALWYRLNEEKA-EWIIYVTDVGQQQ 453 Query: 363 YVKRLEAVAA----------------------AVSEKKAQINVLLCELVRLY-------- 392 + + + + A + E + E+VRL Sbjct: 454 HFEMVFSAAKLAGWLPANDNMYPKASHVGFGLVLGEDGKRFRTRNTEVVRLVDLLDEAKN 513 Query: 393 RDGMPIKMSKRAGDFI--TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKEN 449 R + +A ++ L H + VG +V++ L KN+ L ++ F + K N Sbjct: 514 RSKSVLIERGKAAEWTEQELEHTAEAVGYGAVKYADL--KNNRLTNYTFNFDQMLNDKGN 571 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 Y+ YA+AR SI R++ D+D +L V+ + + E L +HL ++ V+ Sbjct: 572 TAVYLLYAHARICSIIRKSGK---DID-ELKKTGVLTLDHD---DERGLGLHLLQFSEVV 624 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 E A P L YLY+L+ F +S+ Q RL L A A + Sbjct: 625 EEACTNLLPNVLCEYLYNLSENFTKFYSN---------CQVVGSAEETSRLLLCEATAVV 675 Query: 570 INSGLNIIGV 579 + +++G+ Sbjct: 676 MRKCFHLLGI 685 >gi|330807101|ref|YP_004351563.1| arginine--tRNA ligase (arginyl-tRNA synthetase), N-term [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375209|gb|AEA66559.1| Putative arginine--tRNA ligase (Arginyl-tRNA synthetase), N-term [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 247 Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 1/146 (0%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE I+A + D +V IAG GFIN Sbjct: 30 IQVENTRDKTHGDFASNIAMMLAKPAGMKPRDLAEKIIAALPTDENVSKADIAGPGFINF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + L L + ++ G G + ++ + N MHVGH R ++GD +A Sbjct: 90 FQNTQALASRLDA-ALADERIGVRKAGPLQRTVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177 ++ F G V R+ ++ D G Q L Sbjct: 149 RVLEFLGDTVIRQNHVGDWGTQFGML 174 >gi|315607135|ref|ZP_07882139.1| arginine--tRNA ligase [Prevotella buccae ATCC 33574] gi|315251189|gb|EFU31174.1| arginine--tRNA ligase [Prevotella buccae ATCC 33574] Length = 605 Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 130/578 (22%), Positives = 237/578 (41%), Gaps = 133/578 (23%) Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAV 145 GF+NL ++P+ ++L+ I +GR + + V IE+ S N P+H+GH R + Sbjct: 82 GFLNLVIAPAAWVELLNDIHADD-RFGRKTATEDSSLVMIEYSSPNTNKPLHLGHVRNNL 140 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE------- 198 +G +LA +M +G +V + +ND G I L+ W L + + PE Sbjct: 141 LGWSLAQIMEANGNKVVKTNIVNDRGIHICKSMLA--W-----LKWGNGETPESSGKKGD 193 Query: 199 ---GYYPGVYLKHVGKE--------LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247 G Y + KH +E +AD E + P++K+ Sbjct: 194 HLIGDYYVAFDKHYREEVKALKAQYIADGLDEEKAEEKAKAEAPLIKE------------ 241 Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS----------- 296 H++ + + +GDP +R + + + +VY G K+ Sbjct: 242 -------AHEMLVK---WEQGDPE-VRALWEKM--NNWVYAGFDETYKALGVGFDKIYYE 288 Query: 297 -----KTTQKCDMD-RKQLLFR-------STMVGDDVDRPLL-KSDGSYTYFAADLAYFK 342 + +K + K L FR + + D +D+ LL ++DG+ Y D+ Sbjct: 289 SDTYLEGKKKVEEGLAKGLFFRKDDNSVWADLTEDGLDQKLLLRADGTSVYMTQDIGTAD 348 Query: 343 CKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC-ELVRL------YRD 394 +++ D MIYV+G++ + + + L + + K + V +V L R+ Sbjct: 349 MRFKDFPIDKMIYVVGNEQNYHFQVLSLLLDRLGFKWGKELVHFSYGMVELPNGKMKSRE 408 Query: 395 GMPI--------------KMSKRAGDFITL-----RHVVDEVGSDSVRFMML---WRKN- 431 G + + S G F + R + VG ++++ +L RKN Sbjct: 409 GTVVDADELIAAMIENARRTSDELGKFTDMTEDEKREIARIVGLGALKYFILKVDARKNM 468 Query: 432 ----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487 E +DF+ N ++QY YAR RSI R+A D P + +P+ Sbjct: 469 LFNPEESIDFN---------GNTGPFIQYTYARIRSIMRKAA-----ADGITIP-SALPE 513 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 ++ + E+ LI + ++ + A + P +A Y Y+L F+ + + + Sbjct: 514 DAPLNEKEINLIQKMNDFGAAVAQAGVDYSPSGIANYCYELVKEFNQFY----HDYSILN 569 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++ KLT RL L VA I+ S + ++G+E P M Sbjct: 570 AEHDDEKLT--RLVLAQNVAKIVKSAMALLGIEVPERM 605 >gi|167538705|ref|XP_001751014.1| hypothetical protein [Monosiga brevicollis MX1] gi|163770493|gb|EDQ84184.1| predicted protein [Monosiga brevicollis MX1] Length = 1019 Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 135/590 (22%), Positives = 260/590 (44%), Gaps = 99/590 (16%) Query: 47 TNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKI 101 +NAAM L+ L + P +A A I + + IAG GF+N+ ++ S+L + Sbjct: 131 SNAAMRLAAQLKAKGTKMPPREVAAAFTAAIPKNDIISGYEIAGPGFVNIDINTSFLEGV 190 Query: 102 LSSIVVSGIEYGRNLIGKGTK--VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 + ++ G+ L + TK V ++F S N MHVGH R ++G+++A ++ + G+ Sbjct: 191 TTKLLNKGV-----LPPEHTKQPVIVDFSSPNIAKEMHVGHLRSTIIGESIARMLEYIGH 245 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQ--QALYNNDSDLPEGYYPGVYLKHVGKELADKY 217 +V R ++ D G L + ++ Q+ + SDL +G+Y + Sbjct: 246 DVQRVNHVGDWGTPFGMLICHLRDKFPNFQSEPPSISDL-QGFYKAAKKR---------- 294 Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDD---LKALNIQHDIFISEDDFHRGDPSPIR 274 F EE P K +A++K+ D + A N+ D +S +F R I Sbjct: 295 ------FDEE---PEFKPRVYEAVVKLQAHDPETILAWNLVCD--VSRREFQR-----IY 338 Query: 275 DIID-NLARQG-YVYEGILPP--PKSKTTQKCDMD----RKQLLFRSTMVGDDVDRPLLK 326 D +D ++ +G Y+ ++ + ++ K + D +++ + S V ++K Sbjct: 339 DRLDIDVKEKGESFYQDMMVEVVKQLESAGKLEEDDTAPGRKIAWSSVKKETKVPLIVVK 398 Query: 327 SDGS------YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA---AAVSEK 377 SDG+ YTY +DLA + + + ++YV+ + S + + + A+ VS K Sbjct: 399 SDGARCGMTGYTYDTSDLAALRYRASQA-TWLVYVVDNGQSTHFQNVFALGRDMEWVSPK 457 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----VGSDSVRFMMLWRKNSE 433 +V V L DG K R+GD + L+ ++DE G+ + M + + Sbjct: 458 HRVDHVGFG--VVLGEDGKRFKT--RSGDTVRLKDLLDEGVERAGAAARTTEMTPEQRAR 513 Query: 434 LLD---------------------FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 +++ F + K+ Q K N Y+ YA R SI R + Sbjct: 514 MVEAIAYGCIKYADLSHNRTNDYVFSYDKML-QDKGNTAVYLLYANTRVHSILRNPEIAK 572 Query: 473 PDLDFD-LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 ++D D L P + + + E+++ +LA +P V+ P++L Y+Y+L +V Sbjct: 573 QNIDIDALAPSHTV---TLTHPKEIKIAKYLARFPEVLNRTIDTLMPHRLCDYIYELTNV 629 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 F + +E ++ + K+ + RL L +V ++ +++G+ + Sbjct: 630 FTEFY---QECYAVQKQSDGSVKVDVNRLMLYKSVGMVLEQAFHLLGIRA 676 >gi|152998130|ref|YP_001342965.1| arginyl-tRNA synthetase [Marinomonas sp. MWYL1] gi|189083538|sp|A6W2V1|SYR_MARMS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|150839054|gb|ABR73030.1| arginyl-tRNA synthetase [Marinomonas sp. MWYL1] Length = 577 Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 141/591 (23%), Positives = 228/591 (38%), Gaps = 98/591 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ L ++P A+ + ++ + + V IAG GFIN++L +L K L Sbjct: 37 GDYQANGIMGAAKALKMNPCDFAQATLDKLDLSDLAEKVEIAGPGFINIFLKNVWLSKEL 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + + S N + V +++ S N MHVGH R V+GD + + F G+ V Sbjct: 97 TQLRTSE-RLDVNPVDAPETVVVDYSSPNLAKEMHVGHLRSTVIGDAVVRTLEFFGHHVV 155 Query: 163 REYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGYYPG 203 R+ ++ D G Q L L F+R + ++ D Sbjct: 156 RQNHVGDWGTQFGMLLAYMERLRSENATISMALSDLETFYRAAKTCFDEDEAFATRSREL 215 Query: 204 VYLKHVGKE----LADKYSSELLNFPEEKWLPIVKDYSVQAMM--KIIRDDLKAL----- 252 V G E L D++ + L EE + + Q +M DDL + Sbjct: 216 VVALQSGDEECLALWDEFINISLTHCEETYKMLGVSLERQHVMPESAYNDDLANVVNELK 275 Query: 253 --------NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 N +F+ E G+ +P II G++Y TT + Sbjct: 276 EQGLLQESNGAQCVFMEEFANKEGEITP---IIVQKTGGGFLY---------ATTDLAAV 323 Query: 305 DRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY--VMGSD-- 359 +Q + V VD R L +T + A F K E ++M + VMGSD Sbjct: 324 RFRQHTLNANRVLYFVDARQSLHFQQIFTL--SRKAGF-VKPETQLEHMPFGTVMGSDGK 380 Query: 360 ----HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 SG V +L ++ E+ Q+ + D LR++ Sbjct: 381 PFKTRSGGVAKLSSLLEEAQERAYQL----------------VASKNPEMDEEELRNIGR 424 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARCRSIFRQAKDIFPD 474 VG SV++ L + + D+ F S E N Y+ YAY+R SI +++ Sbjct: 425 VVGIASVKYADLSKNRTS--DYVFNWDSMLSFEGNTAPYLLYAYSRVASIVKRS------ 476 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 + D+ N+ + S + E L V L ++ I+ P+ L YLYDLA F Sbjct: 477 -EIDVV--NLTGEISIDEPQERALAVKLCQFEEAIQQVANDGMPHFLCAYLYDLAGTFMT 533 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P L ++ RLQL AS + GL+++G+E+ M Sbjct: 534 FY---EACPILN----AEDEVKHSRLQLALNTASTLKLGLSLLGIETLERM 577 >gi|313206268|ref|YP_004045445.1| arginyl-tRNA synthetase [Riemerella anatipestifer DSM 15868] gi|312445584|gb|ADQ81939.1| arginyl-tRNA synthetase [Riemerella anatipestifer DSM 15868] gi|315023050|gb|EFT36063.1| arginyl-tRNA synthetase [Riemerella anatipestifer RA-YM] gi|325336290|gb|ADZ12564.1| Arginyl-tRNA synthetase [Riemerella anatipestifer RA-GD] Length = 587 Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 134/598 (22%), Positives = 240/598 (40%), Gaps = 136/598 (22%) Query: 68 IVARIKIDPDV-----------DSVFIAG----KGFINLYLSPSYLRKILSSIVVSGIEY 112 +V ++K PD S F+ G KGF+NL + Y + S + + Sbjct: 46 LVKQLKKSPDALGQEIGEALINSSDFVEGFNVVKGFLNLKVKNKYF---IESFKAEELNF 102 Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172 G + K V +E+ S N P+H+GH R ++G ++A ++ +GY+V + +ND G Sbjct: 103 G-TVTPKHQTVMVEYSSPNTNKPLHLGHIRNILLGYSVAQILKEAGYDVIKTQIVNDRGI 161 Query: 173 QINTLALSVFW-RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231 I L+ W ++ DS L G Y +E Y E+ N E Sbjct: 162 HICKSMLA--WEKFGNGETPADSGLKGDKLVGNYYVKFDQE----YKKEIQNLVENG--- 212 Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISED----DFHRGDPSPIRDIIDNLARQGYVY 287 + D+ K Q IF+ D+ + +P +R++ + + +VY Sbjct: 213 ------------LGEDEAKK---QALIFVEAQKMLLDWEQENPQ-VRELWQKMNQ--WVY 254 Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRST--MVGDDV------------------------- 320 +G +T ++ +D Q+ + S ++G D+ Sbjct: 255 DGF-----GETYKRLGVDFDQIQYESNTYILGKDLIQEGLSKGVLYQKEDGSVWCDLSDE 309 Query: 321 ---DRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYV----KRLEAVAA 372 + LL+SDG+ Y DL ++++ +IY +G++ + K L+ + Sbjct: 310 GLDQKLLLRSDGTSVYMTQDLGTAVERFKQNDIQKLIYTVGNEQDYHFQVLFKILKKLGY 369 Query: 373 AVSEKKAQINVLLCELVR---LYRDG-----------MPIKMSKRAGDFITLRHVVDE-- 416 +E ++ + EL R+G M + ++A + L H+ +E Sbjct: 370 DWAEHLYHLSYGMVELPHGKMKSREGTVVDADDLMQEMYLTAKEKAQELGKLEHLPEEDK 429 Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE---NPVFYVQYAYARCRSIFRQ 467 VG ++++ ML + + F+ E+S + N ++QY YAR +S+ + Sbjct: 430 ERSYEIVGQGALKYYMLKVDPKKKMLFN----PEESIDFNGNTGPFIQYTYARIQSLLEK 485 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 A DL D+ E + E +LI HL + V+ A P +LA Y+YD Sbjct: 486 AGYEPQDLADDI----------EINAYEKELITHLGNFKTVVSKAAETLSPAQLANYIYD 535 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L ++ + + NP L A + L RL+L A I GL ++G+ N M Sbjct: 536 LVKSYNSFYQN---NPILNQEDAAVKNL---RLKLSALTAKTIKRGLELLGIGVVNRM 587 >gi|226320820|ref|ZP_03796373.1| arginyl-tRNA synthetase [Borrelia burgdorferi 29805] gi|226233762|gb|EEH32490.1| arginyl-tRNA synthetase [Borrelia burgdorferi 29805] Length = 585 Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 121/535 (22%), Positives = 218/535 (40%), Gaps = 82/535 (15%) Query: 88 FINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N+ +S Y+ + + YG + K+ +EF S N P+HVGH R V+ Sbjct: 84 YLNIKISRKEYINNTIQMVNAQKDTYGTSKYLDNKKIILEFSSPNTNKPLHVGHLRNDVI 143 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRY---QQALYNNDSDLPEGYY 201 G++L+ ++ G ++T+ IND G I + LA F ++A D + + Y Sbjct: 144 GESLSRILKAVGAKITKINLINDRGVHICKSMLAYKKFGNGITPEKAFKKGDHLIGDFYV 203 Query: 202 PGVYLKHVGK-ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI--IRDDLKALNIQHD- 257 Y K+ + E A+K +LL E+K + ++ + I I++ + N D Sbjct: 204 K--YNKYSQENENAEKEIQDLLLLWEQKDVSTIELWKKLNKWAIEGIKETYEITNTSFDK 261 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPPPKSKTTQKCDMDRKQLLFRS 313 I++ + F G ++++ +G+ Y+ I S + +K D KQ Sbjct: 262 IYLESEIFEIG-----KNVVLEGLEKGFCYKREDGAICIDLPSDSDEKADTKVKQ----- 311 Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAA 372 + L++S+G+ Y DL + E F+ MIYV+GS+ + K L VA Sbjct: 312 --------KVLIRSNGTSIYLTQDLGNIAVRTKEFNFEEMIYVVGSEQIQHFKSLFFVAE 363 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 + K + + L + DG KM R G+ I +++ + + M +N Sbjct: 364 KLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNVIDADNLISNLIESIIPEMTQKIENK 420 Query: 433 E----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQA 468 E L + +K ++ VF Y+QY AR SI + Sbjct: 421 ESAKKNALNIALGAIHYYLLKSAIHKDIVFNKKESLSFTGNSGPYIQYVGARINSILEKY 480 Query: 469 KD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 K + +DF+L E ++I ++E I NA P L Y Sbjct: 481 KALSIPVMEKIDFELLKH----------EKEWEIIKIISELEENIINAAKDLNPSILTSY 530 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 Y LA F ++ ++ + NN LT R++ + A+ I + + ++ + Sbjct: 531 SYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEFLKAILQTIKNCMYLLNI 579 >gi|157117728|ref|XP_001658908.1| arginyl-tRNA synthetase [Aedes aegypti] gi|108884575|gb|EAT48800.1| arginyl-tRNA synthetase [Aedes aegypti] Length = 671 Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 131/599 (21%), Positives = 252/599 (42%), Gaps = 124/599 (20%) Query: 47 TNAAMILSRPLGLD----PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 NA I+ + LD P +A ++ + P + V +AG GF+N++L ++ + Sbjct: 127 NNAMQIVQKLKALDVKTNPRDVANKLMEALPPSPAISKVEVAGAGFVNVFLDKAFGASAI 186 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 SI+ G++ + + +V ++F S N MHVGH R ++GD+++ + F G++V Sbjct: 187 MSILKDGVKPPQ---FEKRRVIVDFSSPNIAKEMHVGHLRSTIIGDSISRFLEFLGHDVL 243 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNND--SDLPEGYYPGVYLKHVGKELADKYSSE 220 R ++ D G Q L + R+ L + SDL +G+Y KE ++ S+ Sbjct: 244 RLNHVGDWGTQFGMLIAHLQDRFPDYLKVSPPISDL-QGFY---------KESKSRFDSD 293 Query: 221 LLNFPEEKWLPIVK-----DYSVQA---MMKIIRDDLKALNIQHDIFISEDDFHRGDP-- 270 +F + + +VK D S++A + + R + + + + ++ + E RG+ Sbjct: 294 -EDFKKRAYACVVKLQSGDDDSMKAWKLICDVSRKEFQKVYDRLNVKLIE----RGESFY 348 Query: 271 -SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 + I+ LA G++ E D RK +++ G + ++KSDG Sbjct: 349 QKRMEAIVKELANAGFLEE--------------DEGRK-IMWGENRNG--IPLTIIKSDG 391 Query: 330 SYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 +TY +D+A K + +E + ++YV + + + + + + A + NVL + Sbjct: 392 GFTYDTSDMAAIKQRLHEEKGEWLVYVTDAGQATHFQTIFSCA-------RRANVLDPNV 444 Query: 389 VRLYRDGMPI-------KMSKRAGDFITLRHVVDE------------------------- 416 R+ G + K R+GD + L ++DE Sbjct: 445 HRVDHVGFGVVLGEDGKKFKTRSGDTVKLTELLDEGLKRSLDKLLEKERDKVLTPEELKQ 504 Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 V +++ L + F F K+ E K N Y+ YAY R RSI R F Sbjct: 505 AQESVAYGCIKYADLSHNRNNEYIFSFDKMLE-DKGNTAVYLLYAYTRIRSIARNCGGDF 563 Query: 473 PDLDFDLFPRNVIPQESEFDTSEL--------QLIVHLAEYPRVIENATIAQEPYKLAFY 524 + N+ E DT+EL +L L ++ V++ + + L + Sbjct: 564 AN--------NI---EKVIDTTELTLDHEKEWKLAKVLLKFTDVMKLISKNLCLHHLCEF 612 Query: 525 LYDLASVFHGHWSHG---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 +Y++++ F + +N + V K+ R+ L A + I+ +I+G++ Sbjct: 613 VYEVSTTFTEFYDSCYCIEKNKQGEIV-----KINAGRVLLCEATSRILGKCFDILGLK 666 >gi|257894701|ref|ZP_05674354.1| arginyl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|257831080|gb|EEV57687.1| arginyl-tRNA synthetase [Enterococcus faecium 1,231,408] Length = 470 Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 123/526 (23%), Positives = 223/526 (42%), Gaps = 98/526 (18%) Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161 + ++V YG + IG V I+ S N P+ +GH R V+G+++ +M GY+ Sbjct: 1 MQTVVKEKEHYGDSNIGNQGTVPIDMSSPNIAKPISMGHLRSTVIGNSIGFIMEKIGYQP 60 Query: 162 TREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 R ++ D G Q L ++ W ++A+ P +Y++ E+A+ + Sbjct: 61 IRINHLGDWGTQFGKLIVAYKKWGTEEAVKAE----PINELLRLYVQF--HEVAE--TEP 112 Query: 221 LLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHRGDP---SPIR 274 LN W +++ +A + + RD+ +K N +D+ D G+ + Sbjct: 113 ELNEEARAWFKRLEEGDKEAIQLWQWFRDESMKEFNKIYDLLEVRFDSLNGEAFYNDKMD 172 Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYT 332 +I+ L + + E K + D+ L P L KSDG+ Sbjct: 173 EIVKLLEEKHLLNE-------DKGAEIVDLSAYDL------------NPALIKKSDGATL 213 Query: 333 YFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------------- 370 Y DLA Y K Y+ F +YV+G++ S + K+L+AV Sbjct: 214 YITRDLAAALYRKRTYD--FKQSLYVVGNEQSYHFKQLKAVLKEMGFDWSDDMHHIPFGL 271 Query: 371 ----AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 +S +K +I VLL E++ ++S++ D V +VG +V F Sbjct: 272 ITQGGKKLSTRKGKI-VLLEEVLNEAIQSAKEQISEKNPDLENKDAVAKQVGVGAVIFHD 330 Query: 427 LWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 L KN L FDF V+ + + P YVQY +AR S+ +A Sbjct: 331 L--KNDRLNTFDFNLEEVVRFEGETGP--YVQYTHARAVSLLEKA--------------G 372 Query: 484 VIPQESE----FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 +P E+ D + +++ + +YP + +A EP +A + LA F+ +++H Sbjct: 373 FVPSETADYALNDDTSWEVVKLVQKYPETVLSAGEKYEPSVIAKHAIKLAQAFNKYYAHT 432 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + A++ + RL LV+AV ++ L ++G+ +P++M Sbjct: 433 K-------ILADDEQ-KEARLALVYAVTVLLKEDLRLLGLHAPDKM 470 >gi|307168598|gb|EFN61656.1| Arginyl-tRNA synthetase, cytoplasmic [Camponotus floridanus] Length = 642 Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 121/487 (24%), Positives = 205/487 (42%), Gaps = 89/487 (18%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGK 86 +++ + G N+AM L++ L + P IA I+++++ P VD IAG Sbjct: 116 VIVTTSNNPKFGDYQCNSAMPLAQQLSSSGNKVIPRNIANNIMSKLEESPLVDKYEIAGA 175 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNL--IGKGTKVNIEFVSANPTGPMHVGHCRCA 144 GFIN+YL + + +LS+ ++ G L K +V ++F S N MHVGH R Sbjct: 176 GFINIYLKRDFGQLVLSN----WLKIGEVLPPYVKKKRVIVDFSSPNIAKEMHVGHLRST 231 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP-----EG 199 ++GD+++ L+ + G++V R +I D G Q L + Q N + P + Sbjct: 232 IIGDSISRLLEYLGHDVLRLNHIGDWGTQFGMLIAHL----QDKFPNYSTVTPAIQDLQA 287 Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259 +Y ++ E K + E + + I K + + + + R + + L + DI Sbjct: 288 FYKESKIRFDSDEEFKKRAYECVVKLQAFEPNITKGWKM--ICDVSRKEFEKLYTRLDIK 345 Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319 + E RG+ + + E I+ +SK + D RK + VG Sbjct: 346 LIE----RGESFYQKRM-----------ELIVKELESKNLLEEDNGRKVMWGEKHGVG-- 388 Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 + ++KSDG +TY +D+A K + E + + S + + LE+ A KKA Sbjct: 389 IPLIIVKSDGGFTYDTSDMAAIKQRIEEERADW---ANAGQSLHFQMLESCA-----KKA 440 Query: 380 QINVLLCELVRLYRDGMPI-------KMSKRAGDFITLRHVVDE---------------- 416 I L R++ G + K R+G+ + L ++DE Sbjct: 441 GI---LKSFHRVHHVGFGVVLGEDKKKFKTRSGETVKLIELLDEGLKRTLQKLKEKERDK 497 Query: 417 --------VGSDSVRFM------MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462 +SV + +L +N E + F F K+ E K N Y+ YA R R Sbjct: 498 VLSEEELKAAQESVAYGCIKYADLLHNRNHEYV-FSFDKMLE-DKGNTAVYILYALTRIR 555 Query: 463 SIFRQAK 469 SI R AK Sbjct: 556 SIARMAK 562 >gi|224023557|ref|ZP_03641923.1| hypothetical protein BACCOPRO_00260 [Bacteroides coprophilus DSM 18228] gi|224016779|gb|EEF74791.1| hypothetical protein BACCOPRO_00260 [Bacteroides coprophilus DSM 18228] Length = 605 Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 132/571 (23%), Positives = 225/571 (39%), Gaps = 117/571 (20%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 KGF+NL ++ ++L+ I E+G R V IE+ S N P+H+GH R Sbjct: 81 KGFLNLTIASDVWVELLNRIHADA-EWGIRKADENAPLVMIEYSSPNTNKPLHLGHVRNN 139 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE------ 198 ++G+ LA++MA +G +V + +ND G I L+ W L + + PE Sbjct: 140 LLGNALANIMAANGNKVVKTNIVNDRGIHICKSMLA--W-----LKYGNGETPESSGKKG 192 Query: 199 ----GYYPGVYLKHVG---KELADKYSSELLNFPE-------------------EKWLPI 232 G Y + KH KEL K+ +E +N E KW Sbjct: 193 DHLIGDYYVAFDKHYKAEVKELMAKFQAEGMNEEEAKAKAEAESPLMLEAREMLRKWE-- 250 Query: 233 VKDYSVQAMMKIIRD--------DLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNLARQ 283 D V+++ K++ D K + + D I+ + G + + + Sbjct: 251 ANDPEVRSLWKMMNDWVYAGFDETYKMMGVSFDKIYYESQTYLEGKEKVMEGL-----EK 305 Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343 G+ + K + D+ T G D + LL++DG+ Y D+ K Sbjct: 306 GFFFR------KEDGSVWADL---------TAEGLD-HKLLLRADGTSVYMTQDIGTAKL 349 Query: 344 KYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402 +++ + MIYV+G++ + + + L + + + + V + +G KM Sbjct: 350 RFQDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEWGKDLVHFSYGMVELPEG---KMKS 406 Query: 403 RAGDFI-----------TLRHVVDEVGS----------DSVRFMMLWRKNSELLDFDFCK 441 R G + T + +E+G D R + L +L D K Sbjct: 407 REGTVVDADDLMEAMIETAKETSNELGKLDGLTKEEADDIARIVGLGALKYFILKVDARK 466 Query: 442 -VKEQSKENPVF------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494 + KE+ F ++QY YAR +SI R+A + + VIP E T Sbjct: 467 NMTFNPKESIDFNGNTGPFIQYTYARIQSILRKAAEA------GITVPAVIPAGIELSTK 520 Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554 E LI LA++ V++ A P LA Y YDL ++ + ++ N Sbjct: 521 EEGLIQMLADFGNVVKQAGTDYNPSILANYAYDLVKEYNQFYHD------FSILREENEA 574 Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L + RL L V ++ + ++G+E P M Sbjct: 575 LKVFRLALSQNVGKVVKLAMGLLGIEVPERM 605 >gi|50744720|ref|XP_419847.1| PREDICTED: hypothetical protein [Gallus gallus] Length = 579 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 132/569 (23%), Positives = 235/569 (41%), Gaps = 104/569 (18%) Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGT-- 121 A+ + ++K D V + G G +N ++ L K +L ++ G +YG T Sbjct: 67 AQKLAEKLKCDAVVSEIS-TGPGTVNFTINRELLAKTVLQQVLKDGTQYGTKSELFSTVP 125 Query: 122 --KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 K +EF S N H+GH R ++G+ +A+L G+EVTR Y+ D G Q L + Sbjct: 126 KQKAVVEFSSPNIAKKFHIGHLRSTIIGNFIANLKVALGHEVTRINYLGDWGMQFGLLGV 185 Query: 180 SVFWRYQQALYNNDSDL---PEGYYPGVYLKHVGKELADKYSSEL-------LNFPEEKW 229 +QQ + + L P + VY++ + K AD+ + +L L +E+ Sbjct: 186 G----FQQ--FGDKEKLKSSPLQHLFEVYVQ-INKAAADEKTKKLAKDFFRKLEEHDEQA 238 Query: 230 LPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286 L + K D+S++ +I K L + D + S + F++ + ++++ Sbjct: 239 LSLWKEFRDFSIKEYTRI----YKRLGVHFDEY-SGESFYQEKSWEVLKMLED------- 286 Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346 +G+L +K T D+ K+ L + V ++SDG+ Y DLA + Sbjct: 287 -KGLLQKT-TKGTGVVDLSEKKDLSSLSTV--------IRSDGTSLYITRDLAAAIDRMN 336 Query: 347 R-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405 + +D MIYV + S + + L + + + C+ V G+ M R G Sbjct: 337 KYNWDTMIYVTDRNQSSHFQHLFQILKLMGYDWVE----RCQHVSF---GLVQGMKTRKG 389 Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSEL-------------------------LDFDFC 440 + I L V+DEV S + M + E+ D+ F Sbjct: 390 EVIFLEDVLDEVRSRMLENMASAKTTKEVEDPVETAEKVGLAALIIQDFRGLLSSDYQFS 449 Query: 441 KVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 + QS+ + ++QY +AR S+ Q P D ++ QE + + ++ Sbjct: 450 WDRALQSRGDTGVFLQYTHARLHSL-EQMHGNEPVTDINV----ACLQEPD----AISVL 500 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYD---LASVFHGHWSHGRENPRLRFVQANNRKLT 556 HL Y V+ ++ +P + YL LA+V H R P V+ + L Sbjct: 501 QHLLRYDEVLYRSSQDLQPKHIVSYLLTLSHLAAVAH------RTLP----VKGSTPALA 550 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L A S++ +G+ ++G+ M Sbjct: 551 QARLCLFQATRSVLANGMKLLGITPVTRM 579 >gi|288926638|ref|ZP_06420553.1| tRNA ligase [Prevotella buccae D17] gi|288336607|gb|EFC74978.1| tRNA ligase [Prevotella buccae D17] Length = 605 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 130/578 (22%), Positives = 237/578 (41%), Gaps = 133/578 (23%) Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAV 145 GF+NL ++P+ ++L+ I +GR + + V IE+ S N P+H+GH R + Sbjct: 82 GFLNLVIAPAAWVELLNDIHADD-RFGRKTATEDSPLVMIEYSSPNTNKPLHLGHVRNNL 140 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE------- 198 +G +LA +M +G +V + +ND G I L+ W L + + PE Sbjct: 141 LGWSLAQIMEANGNKVVKTNIVNDRGIHICKSMLA--W-----LKWGNGETPESSGKKGD 193 Query: 199 ---GYYPGVYLKHVGKE--------LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247 G Y + KH +E +AD E + P++K+ Sbjct: 194 HLIGDYYVAFDKHYREEVKALKAQYIADGLDEEKAEEKAKAEAPLIKE------------ 241 Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS----------- 296 H++ + + +GDP +R + + + +VY G K+ Sbjct: 242 -------AHEMLVK---WEQGDPE-VRALWEKM--NSWVYAGFDETYKALGVGFDKIYYE 288 Query: 297 -----KTTQKCDMD-RKQLLFR-------STMVGDDVDRPLL-KSDGSYTYFAADLAYFK 342 + +K + K L FR + + D +D+ LL ++DG+ Y D+ Sbjct: 289 SDTYLEGKKKVEEGLAKGLFFRKDDNSVWADLTEDGLDQKLLLRADGTSVYMTQDIGTAD 348 Query: 343 CKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC-ELVRL------YRD 394 +++ D MIYV+G++ + + + L + + K + V +V L R+ Sbjct: 349 MRFKDFPIDKMIYVVGNEQNYHFQVLSLLLDRLGFKWGKELVHFSYGMVELPNGKMKSRE 408 Query: 395 GMPI--------------KMSKRAGDFITL-----RHVVDEVGSDSVRFMML---WRKN- 431 G + + S G F + R + VG ++++ +L RKN Sbjct: 409 GTVVDADELIAAMIENARRTSDELGKFTDMTEDEKREIARIVGLGALKYFILKVDARKNM 468 Query: 432 ----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487 E +DF+ N ++QY YAR RSI R+A D P + +P+ Sbjct: 469 LFNPEESIDFN---------GNTGPFIQYTYARIRSIMRKAA-----ADGITIP-SALPE 513 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 ++ + E+ LI + ++ + A + P +A Y Y+L F+ + + + Sbjct: 514 DAPLNEKEINLIQKMNDFGAAVAQAGVDYSPSGIANYCYELVKEFNQFY----HDYSILN 569 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++ KLT RL L VA I+ S + ++G+E P M Sbjct: 570 AERDDEKLT--RLVLAQNVAKIVKSAMALLGIEVPERM 605 >gi|281358702|ref|ZP_06245179.1| arginyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548] gi|281314828|gb|EFA98864.1| arginyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548] Length = 596 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 135/603 (22%), Positives = 238/603 (39%), Gaps = 135/603 (22%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P+ A + +K PDV+ V + K F+N+ + L + + V +E + + Sbjct: 52 NPMQAAAAVAEFLKGHPDVEGVEVV-KAFVNVTVKAGALHRDSVAAVERLLEAAKLPEAQ 110 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 ++ IEF + N P H+GH R +G +LASL+ G++V +ND G I ++ Sbjct: 111 RKRILIEFSAPNTNKPQHLGHVRNNTLGMSLASLLKRVGHDVIEINLVNDRGIHICK-SM 169 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVY--------------LKHVGKELADKYSSELLNFP 225 + R+ + + + G + LK ELADK S EL Sbjct: 170 IAYQRFGNGCTPESTGMKGDHLVGKFYVEYNKALSEEIKVLKAARPELADKDSEEL---- 225 Query: 226 EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285 +L + Q M++ D+ GDP+ +R++ + G+ Sbjct: 226 ---FLETELGRATQKMLQ--------------------DWEAGDPA-VRELWKMM--NGW 259 Query: 286 VYEGILPPPKSKTTQKCDM--DRKQLLFRSTMVGDDV----------------------- 320 V+ G ++T ++ + D L + ++G D+ Sbjct: 260 VFAGF-----AQTYERMGIHFDHTYLESETYLLGKDIVAAGLEKGVFAKREDGAVFCDLG 314 Query: 321 ---DRPLLKSDGSYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVSE 376 + +L+SDG+ Y D+ K+E ++M++V+G + + + + L + + Sbjct: 315 KLGKKVVLRSDGTSVYITQDIGTTLKKFEDYHPESMVWVVGDEQNLHFQMLFEIMKRLGY 374 Query: 377 KKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416 A Q+ L +V L KM R G + + DE Sbjct: 375 PWADQLYHLSYGMVNLPTG----KMKSREGTVVDADDLFDEMAKLATDACKERGGEELDP 430 Query: 417 ---------VGSDSVRFMMLWRKNSELLDFD-FCKVKEQSKENPVFYVQYAYARCRSIFR 466 +G +++FM+L + FD +K + P Y+QYA AR SI R Sbjct: 431 AELAERGEIIGLGALKFMLLKFNPKTTIMFDPAASLKFEGDTGP--YIQYAAARINSIER 488 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 +A + +DF P + ++ +E L V YP V++ A ++ LA Sbjct: 489 KAAE--RGIDFS-------PAKVDWALLAHPAEKALAVTAGFYPAVLKLAAERRDCSGLA 539 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 YL +LA F+ + RE P L A +L RL + AV +II GL + ++ P Sbjct: 540 EYLLNLAKAFNRFY---RECPVL---AAETPELVAGRLAMADAVRTIIVDGLATLTIKVP 593 Query: 583 NEM 585 M Sbjct: 594 QAM 596 >gi|300727425|ref|ZP_07060834.1| arginine--tRNA ligase [Prevotella bryantii B14] gi|299775305|gb|EFI71904.1| arginine--tRNA ligase [Prevotella bryantii B14] Length = 605 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 126/578 (21%), Positives = 239/578 (41%), Gaps = 131/578 (22%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCA 144 KGF+NL ++P+ ++L+ I + ++G + + + V IE+ S N P+H+GH R Sbjct: 81 KGFLNLSIAPAAWVELLNEINANP-KFGEKPVTENSPLVMIEYSSPNTNKPLHLGHVRNN 139 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRY----QQALYNNDSDLPEG 199 ++G +LA +M +G +V + +ND G I L+ W ++A D + + Sbjct: 140 LLGWSLAQIMEANGNKVVKTNIVNDRGIHICKSMLAWLKWGNNITPEKAGKKGDHLIGDF 199 Query: 200 Y--YPGVYLKHVGKELADKYSSELLNFPE-----EKWLPIVKDYSVQAMMKIIRDDLKAL 252 Y + Y + V KEL +Y++E + E E+ P++K+ Sbjct: 200 YVAFDKHYREEV-KELVAQYTAEGMGEEEAKKKAEQEAPLIKE----------------- 241 Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS---------------- 296 HD+ + + DP IR + + +VY G K+ Sbjct: 242 --AHDMLVK---WENNDPE-IRQLWAKM--NSWVYAGFDETYKALGVSFDKIYYESNTYL 293 Query: 297 KTTQKCDMD-RKQLLFR-------STMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKY-E 346 + +K + K L +R + + D +D + LL+SDG+ Y D+ ++ + Sbjct: 294 EGKKKVEEGLEKGLFYRRDDNSVWADLTKDGLDEKLLLRSDGTSVYMTQDIGTADMRFSD 353 Query: 347 RGFDNMIYVMGSDHSGYVKRL-----------------------EAVAAAVSEKKAQI-- 381 D MIYV+G++ + + + L E + ++ + Sbjct: 354 FPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKDLVHFSYGMVELPNGKMKSREGTVVD 413 Query: 382 -NVLLCELVRLYRDGMPIKMSKRAGDFITL-----RHVVDEVGSDSVRFMML---WRKN- 431 + L+ E+V+ R+ S G F + + VG ++++ +L RKN Sbjct: 414 ADDLIAEMVKDARE-----TSDELGKFKDMTEEEKNEIARIVGMGALKYFILKVDARKNM 468 Query: 432 ----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487 E +DF+ N ++QY YAR RSI R AK+ ++ L Sbjct: 469 LFNPEESIDFN---------GNTGPFIQYTYARIRSIMRNAKEQNINIPASL------SD 513 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 + + E++LI + ++ + A P +A Y Y+L F+ + Sbjct: 514 NAPLNEKEIELIQKMNDFSAAVAEAGTNYSPSGIANYCYELTKDFNQFYHD------YSI 567 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++A+ + + RL + VA II +G+ ++G++ P M Sbjct: 568 LKADTEEERVTRLVIAENVAKIIKNGMELLGIQVPERM 605 >gi|108762554|ref|YP_631488.1| arginyl-tRNA synthetase [Myxococcus xanthus DK 1622] gi|21307601|gb|AAK59398.1| Arg-tRNA synthetase [Myxococcus xanthus] gi|108466434|gb|ABF91619.1| arginyl-tRNA synthetase [Myxococcus xanthus DK 1622] Length = 573 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 133/593 (22%), Positives = 241/593 (40%), Gaps = 95/593 (16%) Query: 36 RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL-YLS 94 +P + AHG LS A L++ P IA + + + P ++ + ++N + + Sbjct: 33 KPAEPAHGDLSF-ATFPLAKAQKKAPPAIAAGLAQSLSV-PGLEIKAVGP--YVNARFPT 88 Query: 95 PSYLRKILSSIVVSGIEYGRNL-IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + +++ + +GI YG + G+G V I++ S N P+ H R +G +A++ Sbjct: 89 LPFTAEVIDAARSAGIRYGGDEDAGRGKTVAIDYSSPNIAKPIGFHHIRTTFLGHCIANI 148 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 G+ V Y+ D G Q +A+ F Y +D G+ VY+K Sbjct: 149 YRALGWRVEGINYLGDWGKQFGLVAVG-FQEYGDPARIDDM----GHLVEVYVK------ 197 Query: 214 ADKYSSELLNFPEE----------------KWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257 A+K + F E+ K +D S++ KI + I+ + Sbjct: 198 ANKRAEAEPEFDEKARAFFRRMEAGDAEALKLWNQFRDTSIKGFKKI----YARMGIEFE 253 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 E + + +ID +A++ P K +Q L+ T Sbjct: 254 HIEGESRYQ----GKMDAVIDQIAKK----------PGVKESQGA------LIVDLTYAE 293 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS--------------- 361 ++ L K+DGS Y DLA + +YER FD +YV+ D + Sbjct: 294 NEPPILLKKNDGSTLYATRDLAAAQDRYERFQFDKSLYVVAQDQALHFRQVFRALKEMDL 353 Query: 362 GYVKRLEAVA----AAVSEKKAQINVLLCELVRLYRDGMPIKMSK--RAGDFIT--LRHV 413 + R VA +S +K Q+ V L +++ R+ + +K+ + AG T + Sbjct: 354 PWADRTVHVAFGRIHGMSTRKGQV-VQLNDVLDEARERVSVKVRENVEAGRIQTDDADAL 412 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIF 472 +++ ++ F L K + FD+ +V + P Y+QYA+AR ++ R+ Sbjct: 413 SEQIALGAIAFGDLKHKRASDYTFDWDEVLSFEGHTGP--YLQYAHARAVNVLRKGGGAP 470 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 D L +P+E L+ + P V+ +A EP +A L D+AS Sbjct: 471 ASYDAALL---TLPEEQ-------ALLREIMRLPEVVRDAAEQYEPSLVARLLLDVASAL 520 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++ G + R N L RL L+ A + +GL ++G+ +P+ M Sbjct: 521 SRYYTLGNQERDKRINVEGNDALRSARLALIDAARVTLAAGLTLLGIPTPDNM 573 >gi|151944039|gb|EDN62332.1| mitochondrial arginyl-tRNA synthetase [Saccharomyces cerevisiae YJM789] Length = 643 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 133/557 (23%), Positives = 224/557 (40%), Gaps = 107/557 (19%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIG 118 DP+ +A + + V G F+ +L YL + + +I++ +YG+ Sbjct: 118 DPVAVANRWAIELSTHGCIGKVCAKGP-FLQFFLDQRYLIQSTVPNILLQKGKYGQKKSR 176 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KV +EF S N P H GH R ++G L++L G+ VTR Y+ D G Q LA Sbjct: 177 HQKKVVVEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEAMGWSVTRMNYLGDWGRQFGLLA 236 Query: 179 LSVFWRY--QQALYNNDSDLPEGYYPGVYLKHVGKELADK---------YSSELLNF--- 224 + F RY ++ L P + VY+K + +LA + S E +F Sbjct: 237 VG-FKRYGDEKTLQKQ----PIQHLFDVYVK-INMDLAKEEINGNSKCGISGEARSFFKN 290 Query: 225 ---PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII--DN 279 +E + I + ++ I+ LNI DIF E + + DI +N Sbjct: 291 LENGDENAIKIWNRFRSLSIHHYIQ-TYSRLNINFDIFSGESQVSKESMNEALDIFRKNN 349 Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL- 338 L ++ +G L +D Q S +G V + KSDG+ Y D+ Sbjct: 350 LVKE---IDGALV-----------IDLTQW---SKRLGRVV---VQKSDGTTLYLTRDVG 389 Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 A + K FD M+YV+ S Y+ + + ++N + ++ GM Sbjct: 390 AAIERKKNLHFDKMVYVISSQQDLYMSQFFMIL-------KKMNFEWAKDLQHINFGMVQ 442 Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWR--------------------------KNS 432 MS R G+ + L ++DE +++ M + K+ Sbjct: 443 GMSTRKGNVVFLDTILDEARDKALQIMENNKMKISQVDNPQRVADLIGVSAIIIQDMKSK 502 Query: 433 ELLDFDFCKVKEQSKENPVF-YVQYAYARCRSIFRQAKDIFPDL----DFDLFPRNVIPQ 487 + +++F + S E Y+QY ++R RS+ R + D D+ DF Sbjct: 503 RINNYEFNWNRMLSFEGDTGPYLQYTHSRLRSLERTSSDFTTDMLIHADF---------- 552 Query: 488 ESEFDTSEL-QLIVHLAEYPRVIENATIAQEPYKLAFYLY----DLASVFHGHWSHGREN 542 S + +L +L+ LA+YP V+ A QEP + YL+ ++S + W G+ Sbjct: 553 -SNLNEPQLVELVRLLAQYPDVLRRAFETQEPATIVTYLFKVCHQVSSCYKKIWVSGKPA 611 Query: 543 ----PRLRFVQANNRKL 555 PRL A+ + L Sbjct: 612 DIAIPRLAVYSASRQVL 628 >gi|170028825|ref|XP_001842295.1| arginyl-tRNA synthetase [Culex quinquefasciatus] gi|167877980|gb|EDS41363.1| arginyl-tRNA synthetase [Culex quinquefasciatus] Length = 664 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 133/599 (22%), Positives = 245/599 (40%), Gaps = 124/599 (20%) Query: 47 TNAAMILSRPLGLD----PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 NA I+ + LD P +A I+ + P + V +AG GF+N++L ++ + + Sbjct: 120 NNAMQIVQKLKALDVKTNPRDVAVKIMEAVPQSPMISKVEVAGAGFVNVFLDKTFGAEAI 179 Query: 103 SSIVVSGIE---YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 SI+ G++ + R +V ++F S N MHVGH R ++GD++ + F G+ Sbjct: 180 MSILKDGVKPPVFARK------RVIVDFSSPNIAKEMHVGHLRSTIIGDSICRFLEFLGH 233 Query: 160 EVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 +V R ++ D G Q L + R+ L + P G Y KE ++ S Sbjct: 234 DVLRLNHVGDWGTQFGMLIAHLQDRFPDYLKVSP---PIGDLQAFY-----KESKTRFDS 285 Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH------------R 267 + F + + +VK A D LK + D +S +F R Sbjct: 286 D-EEFKKRAYACVVKLQGGDA------DSLKGWKLICD--VSRKEFQKVYDRLDVKLIER 336 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + I+ +LA+Q ++ E D +++++ D + + Sbjct: 337 GESFYQKRMESIVKDLAKQQFLEED---------------DGRKIMWGENK--DGIPLTI 379 Query: 325 LKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGY-------VKRLEAVAAAVSE 376 +KSDG +TY +D+A K + +E + ++YV + + + +R + + AV Sbjct: 380 IKSDGGFTYDTSDMAAIKQRLHEEKGEWLVYVTDAGQATHFYTIFSCARRAKILDPAVHR 439 Query: 377 -KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416 V+L E DG K R+GD + L ++DE Sbjct: 440 VDHVGFGVVLGE------DGKKFKT--RSGDTVKLTELLDEGLKRSLDKLLEKERDKVLT 491 Query: 417 -----VGSDSVRFMML------WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 +SV + + +N+E + F F K+ E K N Y+ YAY R RSI Sbjct: 492 PEELKAAQESVAYGCIKYADLSHNRNNEYI-FSFDKMLE-DKGNTAVYLLYAYTRIRSIA 549 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R F + D D + + + D E +L L ++ V++ + + L + Sbjct: 550 RNCGGDFAN-DID---KVIASTQLSLDHEKEWKLAKVLLKFTDVMKLISKNLCLHHLCEF 605 Query: 525 LYDLASVFHGHWSHG---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 +YD+++ F + +N + V K+ R+ L A + ++ +I+G++ Sbjct: 606 VYDVSTTFTEFYDSCYCIEKNKQGEIV-----KINAGRVLLCEATSRVLGKCFDILGLK 659 >gi|207110469|ref|ZP_03244631.1| arginyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1] Length = 102 Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 38/66 (57%), Positives = 50/66 (75%) Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 K+ +EFVSANPTGP+H+GH R AV GD+LA + F G+EV EYY+ND G+QI L LSV Sbjct: 31 KIFLEFVSANPTGPLHIGHARGAVFGDSLAKIARFLGHEVLCEYYVNDMGSQIRLLGLSV 90 Query: 182 FWRYQQ 187 + Y++ Sbjct: 91 WLAYRE 96 >gi|633022|gb|AAA61486.1| arginyl-tRNA synthetase [Saccharomyces cerevisiae] Length = 643 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 133/557 (23%), Positives = 224/557 (40%), Gaps = 107/557 (19%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIG 118 DP+ +A + + V G F+ +L YL + + +I++ +YG+ Sbjct: 118 DPVAVANRWAIELSTHGCIGKVCAKGP-FLQFFLDQRYLIQSTVPNILLQKGKYGQKKSR 176 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KV +EF S N P H GH R ++G L++L G+ VTR Y+ D G Q LA Sbjct: 177 HQKKVVVEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEAMGWSVTRMNYLGDWGRQFGLLA 236 Query: 179 LSVFWRY--QQALYNNDSDLPEGYYPGVYLKHVGKELADK---------YSSELLNF--- 224 + F RY ++ L P + VY+K + +LA + S E +F Sbjct: 237 VG-FKRYGDEKTLQKQ----PIQHLFDVYVK-INMDLAKEEINGNSKCGISGEARSFFKN 290 Query: 225 ---PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII--DN 279 +E + I + ++ I+ LNI DIF E + + DI +N Sbjct: 291 LENGDENAIKIWNRFRSLSIHHYIQ-TYSRLNINFDIFSGESQVSKESMNEALDIFRKNN 349 Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL- 338 L ++ +G L +D Q S +G V + KSDG+ Y D+ Sbjct: 350 LVKE---IDGALV-----------IDLTQW---SKRLGRVV---VQKSDGTTLYLTRDVG 389 Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 A + K FD M+YV+ S Y+ + + ++N + ++ GM Sbjct: 390 AAIERKKNLHFDKMVYVISSQQDLYMSQFFMIL-------KKMNFEWAKDLQHINFGMVQ 442 Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFM--------------------------MLWRKNS 432 MS R G+ + L ++DE +++ M + K+ Sbjct: 443 GMSTRKGNVVFLDTILDEARDKALQIMENNKMKISQVDNPQRVADLIGVSAIIIQDTKSK 502 Query: 433 ELLDFDFCKVKEQSKENPVF-YVQYAYARCRSIFRQAKDIFPDL----DFDLFPRNVIPQ 487 + +++F + S E Y+QY ++R RS+ R + D D+ DF Sbjct: 503 RINNYEFNWNRMLSFEGDTGPYLQYTHSRLRSLERTSSDFTTDMLIHADF---------- 552 Query: 488 ESEFDTSEL-QLIVHLAEYPRVIENATIAQEPYKLAFYLY----DLASVFHGHWSHGREN 542 S + +L +L+ LA+YP V+ A QEP + YL+ ++S + W G+ Sbjct: 553 -SNLNEPQLVELVRLLAQYPDVLRRAFETQEPATIVTYLFKVCHQVSSCYKKIWVSGKPA 611 Query: 543 ----PRLRFVQANNRKL 555 PRL A+ + L Sbjct: 612 DIAIPRLAVYSASRQVL 628 >gi|218894150|ref|YP_002443019.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa LESB58] gi|226701383|sp|B7V3E4|SYR_PSEA8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|218774378|emb|CAW30195.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa LESB58] Length = 587 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 1/146 (0%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E +D +HG ++N AM+L++P G+ P +A +V I + V IAG GF+N Sbjct: 30 IQVENTKDRSHGDFASNIAMMLAKPAGMKPRDLAARLVEAIPAHEQLAKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + +L L ++ G G +V I+ S N MHVGH R ++GD +A Sbjct: 90 FQDHVWLAASLDR-ALADERLGVRKAGPAQRVVIDLSSPNLAKEMHVGHLRSTIIGDAVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177 ++ F G V R+ ++ D G Q L Sbjct: 149 RVLEFLGDTVIRQNHVGDWGTQFGML 174 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 19/157 (12%) Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 D + LR + VG DSV++ L + + F+F ++ + N Y+ YA R S+F Sbjct: 424 DEVQLREIGRVVGIDSVKYADLSKHRTSDYSFNF-ELMLSFEGNTAPYLLYACTRVASVF 482 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 R+ L + PQ EL L LA++ +I N + P+ L YL Sbjct: 483 RKLGQGREQLGGKIVLEQ--PQ-------ELALAAQLAQFGDLINNVALKGVPHLLCAYL 533 Query: 526 YDLASVFHGHWSH---------GRENPRLRFVQANNR 553 Y+LA +F + H +++ RLR R Sbjct: 534 YELAGLFSSFYEHCPILTAEDPAQKDSRLRLAALTGR 570 >gi|313110089|ref|ZP_07795991.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa 39016] gi|310882493|gb|EFQ41087.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa 39016] Length = 587 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 1/146 (0%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E +D +HG ++N AM+L++P G+ P +A +V I + V IAG GF+N Sbjct: 30 IQVENTKDRSHGDFASNIAMMLAKPAGMKPRDLAARLVEAIPAHEQLAKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + +L L ++ G G +V I+ S N MHVGH R ++GD +A Sbjct: 90 FQDHVWLAASLDR-ALADERLGVRKAGPAQRVVIDLSSPNLAKEMHVGHLRSTIIGDAVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177 ++ F G V R+ ++ D G Q L Sbjct: 149 RVLEFLGDTVIRQNHVGDWGTQFGML 174 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 19/157 (12%) Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 D + LR + VG DSV++ L + + F+F ++ + N Y+ YA R S+F Sbjct: 424 DEVQLREIGRVVGIDSVKYADLSKHRTSDYSFNF-ELMLSFEGNTAPYLLYACTRVASVF 482 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 R+ L + PQ EL L LA++ +I N + P+ L YL Sbjct: 483 RKLGQGREQLGGKIVLEQ--PQ-------ELTLAAQLAQFGDLINNVALKGVPHLLCAYL 533 Query: 526 YDLASVFHGHWSH---------GRENPRLRFVQANNR 553 Y+LA +F + H +++ RLR R Sbjct: 534 YELAGLFSSFYEHCPILTAEDPAQKDSRLRLAALTGR 570 >gi|15600244|ref|NP_253738.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa PAO1] gi|107104151|ref|ZP_01368069.1| hypothetical protein PaerPA_01005224 [Pseudomonas aeruginosa PACS2] gi|254238242|ref|ZP_04931565.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa C3719] gi|296391898|ref|ZP_06881373.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa PAb1] gi|23822207|sp|Q9HUC8|SYR_PSEAE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|9951342|gb|AAG08436.1|AE004918_6 arginyl-tRNA synthetase [Pseudomonas aeruginosa PAO1] gi|126170173|gb|EAZ55684.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa C3719] Length = 587 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 1/146 (0%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E +D +HG ++N AM+L++P G+ P +A +V I + V IAG GF+N Sbjct: 30 IQVENTKDRSHGDFASNIAMMLAKPAGMKPRDLAARLVEAIPAHEQLAKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + +L L ++ G G +V I+ S N MHVGH R ++GD +A Sbjct: 90 FQDHVWLAASLDR-ALADERLGVRKAGPAQRVVIDLSSPNLAKEMHVGHLRSTIIGDAVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177 ++ F G V R+ ++ D G Q L Sbjct: 149 RVLEFLGDTVIRQNHVGDWGTQFGML 174 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 19/157 (12%) Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 D + LR + VG DSV++ L + + F+F ++ + N Y+ YA R S+F Sbjct: 424 DEVQLREIGRVVGIDSVKYADLSKHRTSDYSFNF-ELMLSFEGNTAPYLLYACTRVASVF 482 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 R+ L + PQ EL L LA++ +I N + P+ L YL Sbjct: 483 RKLGQGREQLGGKIVLEQ--PQ-------ELALAAQLAQFGDLINNVALKGVPHLLCAYL 533 Query: 526 YDLASVFHGHWSH---------GRENPRLRFVQANNR 553 Y+LA +F + H +++ RLR R Sbjct: 534 YELAGLFSSFYEHCPILTAEDPAQKDSRLRLAALTGR 570 >gi|6321883|ref|NP_011959.1| Msr1p [Saccharomyces cerevisiae S288c] gi|308153546|sp|P38714|SYRM_YEAST RecName: Full=Arginyl-tRNA synthetase, mitochondrial; AltName: Full=Arginine--tRNA ligase; Short=ArgRS; Flags: Precursor gi|487937|gb|AAB68931.1| Msr1p: Arginyl-tRNA synthetase [Saccharomyces cerevisiae] gi|190405873|gb|EDV09140.1| arginyl-tRNA synthetase [Saccharomyces cerevisiae RM11-1a] gi|207344651|gb|EDZ71722.1| YHR091Cp-like protein [Saccharomyces cerevisiae AWRI1631] gi|285810000|tpg|DAA06787.1| TPA: Msr1p [Saccharomyces cerevisiae S288c] Length = 643 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 133/557 (23%), Positives = 224/557 (40%), Gaps = 107/557 (19%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIG 118 DP+ +A + + V G F+ +L YL + + +I++ +YG+ Sbjct: 118 DPVAVANRWAIELSTHGCIGKVCAKGP-FLQFFLDQRYLIQSTVPNILLQKGKYGQKKSR 176 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KV +EF S N P H GH R ++G L++L G+ VTR Y+ D G Q LA Sbjct: 177 HQKKVVVEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEAMGWSVTRMNYLGDWGRQFGLLA 236 Query: 179 LSVFWRY--QQALYNNDSDLPEGYYPGVYLKHVGKELADK---------YSSELLNF--- 224 + F RY ++ L P + VY+K + +LA + S E +F Sbjct: 237 VG-FKRYGDEKTLQKQ----PIQHLFDVYVK-INMDLAKEEINGNSKCGISGEARSFFKN 290 Query: 225 ---PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII--DN 279 +E + I + ++ I+ LNI DIF E + + DI +N Sbjct: 291 LENGDENAIKIWNRFRSLSIHHYIQ-TYSRLNINFDIFSGESQVSKESMNEALDIFRKNN 349 Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL- 338 L ++ +G L +D Q S +G V + KSDG+ Y D+ Sbjct: 350 LVKE---IDGALV-----------IDLTQW---SKRLGRVV---VQKSDGTTLYLTRDVG 389 Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 A + K FD M+YV+ S Y+ + + ++N + ++ GM Sbjct: 390 AAIERKKNLHFDKMVYVISSQQDLYMSQFFMIL-------KKMNFEWAKDLQHINFGMVQ 442 Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWR--------------------------KNS 432 MS R G+ + L ++DE +++ M + K+ Sbjct: 443 GMSTRKGNVVFLDTILDEARDKALQIMENNKMKISQVDNPQRVADLIGVSAIIIQDMKSK 502 Query: 433 ELLDFDFCKVKEQSKENPVF-YVQYAYARCRSIFRQAKDIFPDL----DFDLFPRNVIPQ 487 + +++F + S E Y+QY ++R RS+ R + D D+ DF Sbjct: 503 RINNYEFNWNRMLSFEGDTGPYLQYTHSRLRSLERTSSDFTTDMLIHADF---------- 552 Query: 488 ESEFDTSEL-QLIVHLAEYPRVIENATIAQEPYKLAFYLY----DLASVFHGHWSHGREN 542 S + +L +L+ LA+YP V+ A QEP + YL+ ++S + W G+ Sbjct: 553 -SNLNEPQLVELVRLLAQYPDVLRRAFETQEPATIVTYLFKVCHQVSSCYKKIWVSGKPA 611 Query: 543 ----PRLRFVQANNRKL 555 PRL A+ + L Sbjct: 612 DIAIPRLAVYSASRQVL 628 >gi|116053199|ref|YP_793520.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14] gi|254244067|ref|ZP_04937389.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa 2192] gi|122256786|sp|Q02EW6|SYR_PSEAB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|115588420|gb|ABJ14435.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14] gi|126197445|gb|EAZ61508.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa 2192] Length = 587 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 1/146 (0%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E +D +HG ++N AM+L++P G+ P +A +V I + V IAG GF+N Sbjct: 30 IQVENTKDRSHGDFASNIAMMLAKPAGMKPRDLAARLVEAIPAHEQLAKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + +L L ++ G G +V I+ S N MHVGH R ++GD +A Sbjct: 90 FQDHVWLAASLDR-ALADERLGVRKAGPAQRVVIDLSSPNLAKEMHVGHLRSTIIGDAVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177 ++ F G V R+ ++ D G Q L Sbjct: 149 RVLEFLGDTVIRQNHVGDWGTQFGML 174 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 42/157 (26%), Positives = 67/157 (42%), Gaps = 19/157 (12%) Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 D + LR + VG DSV++ L + + F+F ++ + N Y+ YA R S+F Sbjct: 424 DEVQLREIGRVVGIDSVKYADLSKHRTSDYSFNF-ELMLSFEGNTAPYLLYACTRVASVF 482 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 R+ L + PQ EL L LA++ +I N + P+ L YL Sbjct: 483 RKLGQGREQLGGKIVLEQ--PQ-------ELALAAQLAQFGDLINNVALKGVPHLLCAYL 533 Query: 526 YDLASVFHGHWSH---------GRENPRLRFVQANNR 553 Y+LA +F + H +++ RLR R Sbjct: 534 YELAGLFSSFYEHCPILTAEDPAQKDSRLRLAALTGR 570 >gi|254432045|ref|ZP_05045748.1| arginyl-tRNA synthetase [Cyanobium sp. PCC 7001] gi|197626498|gb|EDY39057.1| arginyl-tRNA synthetase [Cyanobium sp. PCC 7001] Length = 604 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 134/549 (24%), Positives = 218/549 (39%), Gaps = 94/549 (17%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98 G N A+ L++PL P IA IV ++K DP + IAG GFINL L P L Sbjct: 47 GDFQANGALPLAKPLKQPPRAIATAIVEQLKADPTFAELCGEPQIAGPGFINLTLRPERL 106 Query: 99 RKILSSIVVSGIEYGRNLIGKGTK----VNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154 ++ + + G G + V ++F S N MHVGH R ++GD LA ++ Sbjct: 107 AAEVAERLADPRLGVPSAAGPGGEEPAPVVVDFSSPNIAKEMHVGHLRSTIIGDALARVL 166 Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPEGYYPGVYLKHVGKEL 213 F G+ V R ++ D G Q L + +AL D+ DL G Y + + Sbjct: 167 EFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALTTADAVDL--GDLVAFYRQAKARFD 224 Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD---LKALNIQHDIFISEDDFHRGDP 270 AD+ + S + ++K+ D LKA + D S +F + Sbjct: 225 ADE---------------AFQATSREEVVKLQGGDPVSLKAWGLLCD--QSRREFQK--- 264 Query: 271 SPIRDIID-NLARQGYVY-----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 I D +D L+ +G + E ++ ++ D + + D P+ Sbjct: 265 --IYDRLDIRLSERGESFYNPYLEAVVADLEAAGLLVTDAGARCVFLEGVSGKDGQPLPV 322 Query: 325 L--KSDGSYTYFAADLAYFKCKYE-----RGFDNMIYVMGSDHSGYVKRLEAVA--AAVS 375 + KSDG + Y DLA + ++ G +IYV + + + + VA A Sbjct: 323 IVQKSDGGFNYATTDLAAIRYRFAPPPQGDGARRVIYVTDAGQASHFAGVFQVARRAGWV 382 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416 A++ + LV+ DG K+ RAGD + LR ++DE Sbjct: 383 PTGARLEHVPFGLVQ-GEDGK--KLKTRAGDTVRLRDLLDEAVERAEADLRRRLQEEERT 439 Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 VG +V++ L + F F ++ + N Y+ YA R I Sbjct: 440 EDEAFIEHVATTVGLAAVKYADLSQNRITNYQFSFDRML-ALQGNTAPYLLYAVVRIAGI 498 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R+ D+ ++ R PQE L+ +AE +E + P +L Y Sbjct: 499 ARKGGDLEGAVEASSL-RFSEPQEWALARELLKFDAVVAE----VEEELL---PNRLCSY 550 Query: 525 LYDLASVFH 533 L++L+ VF+ Sbjct: 551 LFELSQVFN 559 >gi|302875611|ref|YP_003844244.1| arginyl-tRNA synthetase [Clostridium cellulovorans 743B] gi|307690142|ref|ZP_07632588.1| arginyl-tRNA synthetase [Clostridium cellulovorans 743B] gi|302578468|gb|ADL52480.1| arginyl-tRNA synthetase [Clostridium cellulovorans 743B] Length = 562 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 122/542 (22%), Positives = 220/542 (40%), Gaps = 100/542 (18%) Query: 88 FINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N +L + + I+ ++ G YG + G+G + I++ S N P HVGH V+ Sbjct: 77 YVNFFLDKGVFTKNIVEKVLSEGDSYGSSDFGQGKNICIDYSSPNIAKPFHVGHLFTTVI 136 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPG 203 G++L + F GY ++ D G Q L Y ++N+ DL P Sbjct: 137 GNSLYKMFNFVGYNSIGINHLGDWGTQFGKLI------YAYKHWSNEEDLEKDPIKELLR 190 Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRD-DLKALNIQHDIFI 260 +Y+K + D E L + ++D +A + + +D L+ +D+ Sbjct: 191 IYVKFHDEAEKD----ETLEDEGRAYFKKLEDGDKEATELWQRFKDVSLREFKKVYDLLG 246 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG--- 317 + D + G+ S D +D + + + K+LL S Sbjct: 247 VDFDSYAGE-SFYNDKMDVIVEE--------------------LKNKKLLVESNGAQVVN 285 Query: 318 -DDVDRP---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 ++ + P +LKSDG+ Y DLA Y K Y+ F+ IYV+G D S + K++ V Sbjct: 286 LEEYNMPPCIVLKSDGATIYATRDLAAANYRKNTYD--FEKCIYVVGKDQSLHFKQIFKV 343 Query: 371 AAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429 + A + + + LVR K+S R GD I L ++ E + ++ ++ Sbjct: 344 LELMGNDWAKECHHVPFGLVRF----ADKKLSTRKGDVIFLDELLAESVAKTLE--IINE 397 Query: 430 KNSELLDFD------------FCKVKEQSKENPVF--------------YVQYAYARCRS 463 KN L + + F +K +++ VF YVQY YAR +S Sbjct: 398 KNPNLENKEDVSKKVGIGAMIFTYLKNSREKDIVFDWKEMLSFEGETGPYVQYTYARAKS 457 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ + + D+ L E +L L I A EP + Sbjct: 458 ILRRIGEGSGECDYTLLSSK----------EEFELAKSLEGLQAAIFQAIEKLEPSIVTR 507 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+ +++ F+ ++ + + + RL+LV A +I + LN++G+++ Sbjct: 508 YVIEVSKAFNKFYNACQ-------ITTAEDSVKNARLKLVSATTVVIKNALNLLGIDAVE 560 Query: 584 EM 585 +M Sbjct: 561 QM 562 >gi|303236237|ref|ZP_07322833.1| arginine--tRNA ligase [Prevotella disiens FB035-09AN] gi|302483551|gb|EFL46550.1| arginine--tRNA ligase [Prevotella disiens FB035-09AN] Length = 615 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 130/601 (21%), Positives = 239/601 (39%), Gaps = 124/601 (20%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P A+ I A +K + + S + KGF+NL ++P+ +L+ I + + + Sbjct: 64 NPEETAKEIGAYLKDNCNAISDYNVVKGFLNLVIAPAAWIGLLNDIHANEKFGEKQVTAD 123 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 +E+ S N P+H+GH R ++G +L+ +M +GY+V + +ND G I L Sbjct: 124 SPLAMVEYSSPNTNKPLHLGHVRNNLLGWSLSKIMEANGYKVVKTNIVNDRGIHICKSML 183 Query: 180 SVFWRY-------QQALYNNDSDLPEGYYPGVYLKHVGKELA--------DKYSSELLNF 224 + W+ +QA D + + Y + KH +ELA + E Sbjct: 184 A--WQKWGNGITPEQAGKKGDHLIGDFYV--AFDKHYREELATLTAQFQQEGLDEEAAKA 239 Query: 225 PEEKWLPIVK------------DYSVQAMMKIIRD--------DLKALNIQHD-IFISED 263 E+ P++K D V+A+ K++ D KAL + D I+ + Sbjct: 240 KAEQESPLMKEAHDMLVKWEANDPEVRALWKMMNDWVYAGFDETYKALGVGFDKIYYESN 299 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323 + G + + + LA+ ++ K + D+ + L + Sbjct: 300 TYLEGK----KKVEEGLAKGLFIR-------KEDNSVWADLTNEGL----------DQKL 338 Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 LL+SDG+ Y D+ +++ D MIYV+G++ + + + L + + K + Sbjct: 339 LLRSDGTSVYMTQDIGTADMRFKDFPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKGL 398 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFI----------------------TLRHVVDE---- 416 V + +G KM R G + L + +E Sbjct: 399 VHFSYGMVELPNG---KMKSREGTVVDADDLVASMIQNARTLSEDKVNKLEDITEEEKNN 455 Query: 417 ----VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 VG ++++ +L RKN E +DF+ N ++QY YAR RSI Sbjct: 456 IARIVGMGALKYFILKVDARKNMLFNPEESIDFN---------GNTGPFIQYTYARIRSI 506 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R+A ++ P V + + E+ LI + ++ + A + P +A Y Sbjct: 507 LRKANAQGINI-----PATV-EANAPLNEKEIALIQKMNDFGAAVAQAGVDYSPSGIANY 560 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 Y+L F+ + + A+ RL L VA +I +G+ ++G+E P Sbjct: 561 CYELTKEFNQFYHD------YSILNADTEDEKTTRLVLAQNVAKVIKNGMELLGIEVPER 614 Query: 585 M 585 M Sbjct: 615 M 615 >gi|317478351|ref|ZP_07937515.1| arginyl-tRNA synthetase [Bacteroides sp. 4_1_36] gi|316905510|gb|EFV27300.1| arginyl-tRNA synthetase [Bacteroides sp. 4_1_36] Length = 605 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 141/627 (22%), Positives = 265/627 (42%), Gaps = 120/627 (19%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 ++ +++ + GHL+ L R P A+ I ++ + + F KGF+N Sbjct: 27 QVQLQKTKKEFEGHLTLVVFPFL-RMSKKGPEQTAQEIGEYLQANEPSVAAFNVIKGFLN 85 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDT 149 L ++ S ++L+ I +YG + V IE+ S N P+H+GH R ++G+ Sbjct: 86 LTIASSAWIELLNGIHADK-QYGIVAATDNSPLVMIEYSSPNTNKPLHLGHVRNNLLGNA 144 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE----------G 199 LA+++A +G +V + +ND G I L+ W+ Y N + PE G Sbjct: 145 LANIVAANGNKVVKTNIVNDRGIHICKSMLA--WQK----YGN-GETPESSGKKGDHLIG 197 Query: 200 YYPGVYLKHVG---KELADKYSSELLNFPEEKWL-----PIVKDYSVQAMMKIIRDD--L 249 Y + KH KEL K+ SE +N E K P++K+ + + ++K +D + Sbjct: 198 DYYVSFDKHYKAEVKELMAKFQSEGMNEEEAKAKAEAESPLMKE-AREMLVKWEANDPEV 256 Query: 250 KAL--NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-EGILPPPKSKTTQKCDMDR 306 +AL + ++ D+ +R + D + + Y EG K K + + Sbjct: 257 RALWKKMNDWVYAGFDETYR----MMGVTFDKIYYESNTYLEG-----KEKVMEGLE--- 304 Query: 307 KQLLFR-------STMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMG 357 K +R + + G+ +D + LL++DG+ Y D+ K ++ + D MIYV+G Sbjct: 305 KGFFYRKEDGSVWADLTGEGLDHKLLLRADGTSVYMTQDIGTAKLRFADYPIDKMIYVVG 364 Query: 358 SDHS--------------------------GYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 ++ + G V+ E + + L+ E++ Sbjct: 365 NEQNYHFQVLSILLDKLGFEWGKGLVHFSYGMVELPEGKMKSREGTVVDADDLMAEMIDT 424 Query: 392 YRD-----GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML---WRKN-----SELLDFD 438 ++ G ++K D ++ VG ++++ +L RKN E +DF+ Sbjct: 425 AKETSNELGKLDGLTKEEAD-----NIARIVGLGALKYFILKVDARKNMTFNPKESIDFN 479 Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498 N ++QY YAR +S+ R+AK+ ++ L P E E L Sbjct: 480 ---------GNTGPFIQYTYARIQSVLRKAKEAGLEIPAQL------PVGIELSEKEEGL 524 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 I +A++ +++ A P +A Y YDL ++ + ++ N + + Sbjct: 525 IQMVADFAAIVKQAGEDYSPSIIANYTYDLVKEYNQFYHD------FSILREENEAVKIF 578 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 RL L VA ++ G+ ++G+E P+ M Sbjct: 579 RLALSENVAKVVRLGMGLLGIEVPDRM 605 >gi|294675038|ref|YP_003575654.1| arginine--tRNA ligase [Prevotella ruminicola 23] gi|294474183|gb|ADE83572.1| arginine--tRNA ligase [Prevotella ruminicola 23] Length = 594 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 125/563 (22%), Positives = 230/563 (40%), Gaps = 112/563 (19%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 KGF+NL + ++L +I + + + V IE+ S N P+H+GH R + Sbjct: 81 KGFLNLSVGDGAWLQLLDAIDKDERFGMKQVTDESPLVMIEYSSPNTNKPLHLGHVRNNL 140 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205 +G +LA +M +G +V + +ND G I L+ W L + + PE G Sbjct: 141 LGWSLAQIMEANGNKVVKTNIVNDRGIHICKSMLA--W-----LKYGNGETPE--TSGKK 191 Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM-MKIIRDDLKALNIQHDIFISEDD 264 H+ + D Y + ++ EE VK+ Q M + + + + H++ + Sbjct: 192 GDHL---IGDYYVAFDKHYREE-----VKELVAQGMDEEKAKQEAPLIKEAHEMLVK--- 240 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKS----------------KTTQKCDMDRKQ 308 + DP +R + + + +VY G K K K + + Sbjct: 241 WENNDPE-VRALWEKM--NNWVYAGFDETYKKMGVSFDKIYYESQTYLKGKAKVEEGLAK 297 Query: 309 LLFR--------STMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGS 358 LF + + + +D+ LL +SDG+ Y D+ + ++ + D MIYV+G+ Sbjct: 298 GLFERHEDNSVWADLTNEGLDQKLLLRSDGTSVYMTQDIGTAEMRFKDYPIDKMIYVVGN 357 Query: 359 DHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRL------YRDGMPI------------- 398 + + + + L + + K ++ +V L R+G + Sbjct: 358 EQNYHFQVLSILLDRLGFKWGKELTHFSYGMVELPNGKMKSREGTVVDADDLMALMVEDA 417 Query: 399 -KMSKRAGDFITL-----RHVVDEVGSDSVRFMML---WRKN-----SELLDFDFCKVKE 444 K S G F + R + VG ++++ +L RKN E +DF+ Sbjct: 418 YKTSMELGKFDDMTEEERREIARVVGMGALKYFILKVDARKNMLFNPEESIDFN------ 471 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS--ELQLIVHL 502 N ++QY YAR RSI R+A+ + P ++ D + E++L+ + Sbjct: 472 ---GNTGPFIQYTYARIRSILRKAE-----------AEGLKPANAQVDLAEKEVELVQKM 517 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 E+ +E A P +A Y Y+L VF+ + + + + +RL L Sbjct: 518 NEFGAAVEQAGKDYSPSGIANYCYELTKVFNQFYHD------YSILNEPDEQKKAVRLML 571 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 VA II +G++++G+E P M Sbjct: 572 AKNVAKIIKNGMSLLGIEVPERM 594 >gi|251799320|ref|YP_003014051.1| arginyl-tRNA synthetase [Paenibacillus sp. JDR-2] gi|247546946|gb|ACT03965.1| arginyl-tRNA synthetase [Paenibacillus sp. JDR-2] Length = 564 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 123/515 (23%), Positives = 201/515 (39%), Gaps = 97/515 (18%) Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176 IG G +V I+ S N P +GH R ++G+ L +L+ GY+ ++ D G Q Sbjct: 101 IGGGKRVIIDMSSPNIAKPFGIGHLRSTMIGNALYNLLRKVGYDTVNVNHLGDWGTQFGK 160 Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE-----EKWLP 231 + ++ + ++ + + YL EL ++ E + PE +W Sbjct: 161 M-ITAYLKWGDPAGKAEDPIK------AYL-----ELYVRFHEEAVLQPELETEAREWFV 208 Query: 232 IVKDYSVQA---MMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGY 285 ++ +A I D L A N +D D + G+ + +++ L RQG Sbjct: 209 KLESGDTEANRYWRMFIEDSLAAFNKLYDRLGVSFDHYLGESFYNDKMDAVVEQLTRQGL 268 Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKC 343 + E S +D + L P + KSDGS Y DLA Sbjct: 269 LEE-------SDGALVVRLDEEAL------------PPCIIKKSDGSSIYATRDLATAIY 309 Query: 344 KYERGFDN-MIYVMGSDHSGYVKRLEAVAA------AVSEKKAQINVLLCELVRLYRDGM 396 ++++ N ++YV+G++ S + ++L V A K ++L DG Sbjct: 310 RHDQMLGNELLYVVGAEQSLHFRQLFLVLGRMGFDWATECKHIPFGLMLM-------DGQ 362 Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-----------------------SE 433 KMS R G + L V+DE + ++R + N S Sbjct: 363 --KMSTRRGKVVFLEDVLDEAAAHALRIIEDKNPNLAGKAEVAEAVGVGAVIFGDLLHSR 420 Query: 434 LLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490 L + +F V + + P YVQY YAR +S+ R+A + D Q +E Sbjct: 421 LHEVNFSLEDVVNFEGETGP--YVQYTYARTQSLLRKAGSD-GHAESDQHADAADYQYAE 477 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550 D S QL L YP + A EP A YL +LA F+ + H + + Sbjct: 478 GDQS-WQLAKTLMRYPAALSQAAQRYEPSVAARYLIELAQTFNRFYHHEK-------IIT 529 Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N +L LV A + GL ++GV++ EM Sbjct: 530 GNPSEQAAKLTLVRMTAETLEDGLRLLGVKALKEM 564 >gi|221218053|ref|ZP_03589519.1| arginyl-tRNA synthetase [Borrelia burgdorferi 72a] gi|225549660|ref|ZP_03770626.1| arginyl-tRNA synthetase [Borrelia burgdorferi 118a] gi|221192001|gb|EEE18222.1| arginyl-tRNA synthetase [Borrelia burgdorferi 72a] gi|225369937|gb|EEG99384.1| arginyl-tRNA synthetase [Borrelia burgdorferi 118a] Length = 585 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 121/535 (22%), Positives = 218/535 (40%), Gaps = 82/535 (15%) Query: 88 FINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N+ +S Y+ + + YG + K+ +EF S N P+HVGH R V+ Sbjct: 84 YLNIKISRKEYINNTIQMVNAQKDTYGTSKYLDNKKIILEFSSPNTNKPLHVGHLRNDVI 143 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRY---QQALYNNDSDLPEGYY 201 G++L+ ++ G ++T+ IND G I + LA F ++A D + + Y Sbjct: 144 GESLSRILKAVGAKITKINLINDRGVHICKSMLAYKKFGNGITPEKAFKKGDHLIGDFYV 203 Query: 202 PGVYLKHVGK-ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI--IRDDLKALNIQHD- 257 Y K+ + E A+K +LL E+K + ++ + I I++ + N D Sbjct: 204 K--YNKYSQENENAEKEIQDLLLLWEQKDVSTIELWKKLNKWAIEGIKETYEITNTSFDK 261 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPPPKSKTTQKCDMDRKQLLFRS 313 I++ + F G ++++ +G+ Y+ I S + +K D KQ Sbjct: 262 IYLESEIFEIG-----KNVVLEGLEKGFCYKREDGAICIDLPSDSDEKADTKVKQ----- 311 Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAA 372 + L++S+G+ Y DL + E F+ MIYV+GS+ + K L VA Sbjct: 312 --------KVLIRSNGTSIYLTQDLGNIAVRTKEFDFEEMIYVVGSEQIQHFKSLFFVAE 363 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 + K + + L + DG KM R G+ I +++ + + M +N Sbjct: 364 KLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNVIDADNLISNLIESIIPEMTQKIENK 420 Query: 433 E----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQA 468 E L + +K ++ VF Y+QY AR SI + Sbjct: 421 EGAKKNALNIALGAIHYYLLKSAIHKDIVFNKKESLSFTGNSGPYIQYVGARINSILEKY 480 Query: 469 KD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 K + +DF+L E ++I ++E I NA P L Y Sbjct: 481 KALSIPVMEKIDFELLKH----------EKEWEIIKIISELEENIINAAKDLNPSILTSY 530 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 Y LA F ++ ++ + NN LT R++ + A+ I + + ++ + Sbjct: 531 SYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEFLKAILQTIKNCMYLLNI 579 >gi|170097623|ref|XP_001880031.1| predicted protein [Laccaria bicolor S238N-H82] gi|164645434|gb|EDR09682.1| predicted protein [Laccaria bicolor S238N-H82] Length = 591 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 109/467 (23%), Positives = 185/467 (39%), Gaps = 82/467 (17%) Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170 EYG NL GKG KV IE+ S N HVGH R ++G LA+L G+EVT Y+ D Sbjct: 123 EYGTNLTGKGKKVVIEYSSPNIAKSFHVGHLRSTIIGGFLANLYKACGWEVTSLNYLGDW 182 Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230 G Q +A Y++ Y + +L + ++ +V K D + + +W Sbjct: 183 GTQFGMIATG----YEK--YGSQEELEKDAIKHLFDVYV-KVNKDAEADPEVKVEAARWF 235 Query: 231 PIVKDYSVQAM----------MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280 ++D A+ +K + + LNI D + E + + + L Sbjct: 236 KRMEDGDESALKNWRVWRELSVKKYEGEYERLNIHFDEYTGESMVGK---ESMDTALKRL 292 Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340 G + + S + D+ + +L S +V K DG+ Y D+ Sbjct: 293 EELGLIAD-------SNGAKIVDLKKYKL--ESAVV--------RKKDGTSIYLTRDIGG 335 Query: 341 FKCKYER-GFDNMIYVMGSDH----SGYVKRLE---------------AVAAAVSEKKAQ 380 +YE+ FD MIYV+ S + + K L+ + +S +K Sbjct: 336 AIERYEKYKFDKMIYVVSSQQDLHLAQFFKVLDLMEFPWAKNLVHVNYGLVQGMSTRKGT 395 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLDF 437 + V L ++++ M +M K + + V E+G V+ + K F Sbjct: 396 V-VFLDQIIKEAASVMHDQMMKNEDKYNAVEDPETVSREIGITGVKIQDMAAKRINNYTF 454 Query: 438 DFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 ++ ++K + P Y+QYA+ R SI R+ + P +P S+ DT+ L Sbjct: 455 NWDRMKSFEGDTGP--YLQYAHVRLASIGRKNPHLIP-----------LPPPSQIDTTSL 501 Query: 497 -------QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 ++ L YP V++ A EP + + + LA W Sbjct: 502 SSYSQAREIAFLLGTYPDVVKVALKTHEPSGVVTFAFRLAHAISSAW 548 >gi|298386069|ref|ZP_06995626.1| arginine--tRNA ligase [Bacteroides sp. 1_1_14] gi|298261297|gb|EFI04164.1| arginine--tRNA ligase [Bacteroides sp. 1_1_14] Length = 597 Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 133/593 (22%), Positives = 250/593 (42%), Gaps = 119/593 (20%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P A+ I +K + + F KGF+NL ++ + ++L+ I S EYG + K Sbjct: 56 PEQTAQEIGEYLKANEPAVAAFNVIKGFLNLTIASATWIELLNEIQ-SDEEYG---LVKA 111 Query: 121 TK----VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176 T+ V IE+ S N P+H+GH R ++G+ LA+++A +G +V + +ND G I Sbjct: 112 TETSPLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHICK 171 Query: 177 LALSVFWRYQQALYNNDSDLPE----------GYYPGVYLKHVGKELADKYSSELLNFPE 226 L+ W+ Y N + PE G Y + KH ELA+ + Sbjct: 172 SMLA--WKK----YGN-GETPESTGKKGDHLVGDYYVSFDKHYKAELAELMEKGMTKEEA 224 Query: 227 EKWLPIVKDYSVQAMMKIIRDD--LKAL--NIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282 E P++++ + + ++K D ++AL + + ++ D+ +R + D + Sbjct: 225 EAASPLMQE-AREMLVKWEAGDPEVRALWEMMNNWVYAGFDETYR----KMGVGFDKIYY 279 Query: 283 QGYVY-EGILPPPKSKTTQKCDMDRKQLLFR-------STMVGDDVD-RPLLKSDGSYTY 333 + Y EG K K + + K F+ + + + +D + LL+ DG+ Y Sbjct: 280 ESNTYLEG-----KEKVMEGLE---KGFFFKKEDGSVWADLTAEGLDHKLLLRGDGTSVY 331 Query: 334 FAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 D+ K ++ + D MIYV+G++ + + + L + + + + V + Sbjct: 332 MTQDIGTAKLRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKGLVHFSYGMVEL 391 Query: 393 RDGMPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVR 423 +G KM R G + +++E VG +++ Sbjct: 392 PEG---KMKSREGTVVDADDLMEEMVSTAKETSQELGKLDGLTQEEADDIARIVGLGALK 448 Query: 424 FMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IF 472 + +L RKN E +DF+ N ++QY YAR +S+ R+A + + Sbjct: 449 YFILKVDARKNMTFNPKESIDFN---------GNTGPFIQYTYARIQSVLRKAAESGIVI 499 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 P+ IP E E LI +A++ V++ A P +A Y YDL + Sbjct: 500 PEQ---------IPAGIELSEKEEGLIQMVADFAAVVKQAGEDYSPSIIANYTYDLVKEY 550 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + ++ N + + R+ L VA ++ G+ ++G+E P+ M Sbjct: 551 NQFYHD------FSILREENEAVKVFRIALSANVAKVVRLGMGLLGIEVPSRM 597 >gi|330872047|gb|EGH06196.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race 4] Length = 476 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 4/170 (2%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE ++A + D V V IAG GF+N Sbjct: 30 IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPSDEQVSKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + + ++ G +V ++ + N MHVGH R ++GD +A Sbjct: 90 FQN-TAALAARLDAALADAHLSVRKAGAVQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYY 201 +++ F G V R+ ++ D G Q L + + + A + SDL E +Y Sbjct: 149 NVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY 195 >gi|331009578|gb|EGH89634.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 318 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 4/170 (2%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE ++A + D V V IAG GF+N Sbjct: 30 IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + + + ++ G +V ++ + N MHVGH R ++GD +A Sbjct: 90 FQN-TAALAARLDAALADAHLSVRKAGAVQRVVVDLSAPNLAKEMHVGHLRSTIIGDGVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYY 201 +++ F G V R+ ++ D G Q L + + + A + SDL E +Y Sbjct: 149 NVLTFLGDTVIRQNHVGDWGTQFGMLL--AYLQEKPATSDELSDL-ENFY 195 >gi|169858208|ref|XP_001835750.1| arginyl-tRNA synthetase [Coprinopsis cinerea okayama7#130] gi|116503200|gb|EAU86095.1| arginyl-tRNA synthetase [Coprinopsis cinerea okayama7#130] Length = 615 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 125/539 (23%), Positives = 218/539 (40%), Gaps = 118/539 (21%) Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKILSSI-----VV---SGIE--- 111 IA+ ++ + + ++SV + K F++ L+ + +R +L+ + VV +G E Sbjct: 84 IAKKVIDKFTPNEYIESV-VHDKAFLHFRLNTNNMIRAVLTQVYELTHVVPKSAGREDGL 142 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG+N +G+G KV IE+ S N HVGH R ++G LA+L G++V Y+ D G Sbjct: 143 YGQNSVGEGKKVIIEYSSPNIAKSFHVGHLRSTIIGAFLANLYKTCGWDVVSMNYLGDWG 202 Query: 172 AQINTLALSVFWRY--QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK- 228 Q +A S + +Y Q+AL ++D + + VY++ AD PE K Sbjct: 203 TQFGMIA-SGYEKYGNQEAL---EADAIKHLF-DVYVQVNKDAEAD---------PEVKA 248 Query: 229 ----WLPIVKDYSVQAM----------MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274 W ++D A+ +K D+ + LN+ D++ E + + I Sbjct: 249 NAAAWFKRMEDGDPAALENWKVWRSMSIKKYEDEYERLNVSFDVYTGESEVGK---ESID 305 Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334 ++ L G + E S + ++++ +L G V R K DG+ Y Sbjct: 306 KALERLDEMGLIEE-------SNGAKLINLEKWKL-------GKAVVR---KKDGTSIYL 348 Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDH----SGYVKRLEAVAAAVSEKKAQINVLLCELV 389 D+ +YE+ FD MIYV+ S + + K LE + ++ IN Sbjct: 349 TRDIGGAIERYEKYKFDKMIYVVSSQQDLHLAQFFKVLELMEFPWAKDLLHINY------ 402 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGS--------DSVRFMMLWRKNSELLDFDFCK 441 G+ MS R G + L +++E S + ++ + + + Sbjct: 403 -----GLVQGMSTRKGTVVFLNQIINEAASVMHEQMKANEEKYSAVEDPETTSREIGITG 457 Query: 442 VKEQSK-----ENPVF--------------YVQYAYARCRSIFRQAKDIFP-----DLDF 477 VK Q N F Y+QYA+ R S+ R+ + P DL Sbjct: 458 VKIQDMAAKRINNYTFNWERMLSFEGDTGPYLQYAHVRLESLKRKNPHLLPLAEPKDLKL 517 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 +L P ++ ++ L YP V++ A EP + + + LA W Sbjct: 518 ELLASPHTPNQAR------EIAFLLGSYPDVVKTALKTHEPSGVVTFAFRLAHAISSAW 570 >gi|198275364|ref|ZP_03207895.1| hypothetical protein BACPLE_01525 [Bacteroides plebeius DSM 17135] gi|198271700|gb|EDY95970.1| hypothetical protein BACPLE_01525 [Bacteroides plebeius DSM 17135] Length = 605 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 133/576 (23%), Positives = 219/576 (38%), Gaps = 127/576 (22%) Query: 86 KGFINLYLSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 KGF+NL ++ ++L+ I GI+ N V IE+ S N P+H+GH R Sbjct: 81 KGFLNLTIASDVWIELLNRIHTDNQWGIQKADN---NAPLVMIEYSSPNTNKPLHLGHVR 137 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE---- 198 ++G LA++MA +G +V + +ND G I L+ W L + + PE Sbjct: 138 NNLLGSALANIMAANGNKVVKTNIVNDRGIHICKSMLA--W-----LKYGNGETPESSGK 190 Query: 199 ------GYYPGVYLKHVG---KELADKYSSELLNFPE-------------------EKWL 230 G Y + KH KEL +Y +E +N E KW Sbjct: 191 KGDHLIGDYYVAFDKHYKAEVKELMAQYQAEGMNEEEAKAKAEANSPLMLEAREMLRKWE 250 Query: 231 PIVKDYSVQAMMKIIRD--------DLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNL- 280 D V+A+ K + D K + + D I+ + G + + L Sbjct: 251 --ANDPEVRALWKKMNDWVYAGFDETYKMMGVSFDKIYYESQTYLEGKEKVMEGLEKGLF 308 Query: 281 --ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 G V+ + P +D K LL + DG+ Y D+ Sbjct: 309 YRKEDGSVWADLTPE---------GLDHKLLL---------------RGDGTSVYMTQDI 344 Query: 339 AYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397 K +++ + MIYV+G++ + + + L + + + + V + +G Sbjct: 345 GTAKLRFQDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEWGKDLVHFSYGMVELPEG-- 402 Query: 398 IKMSKRAGDFI-----------TLRHVVDEVGS----------DSVRFMMLWRKNSELLD 436 KM R G + T + +E+G D R + L +L Sbjct: 403 -KMKSREGTVVDADDLMEAMIETAKETSNELGKLDGLTQEEADDIARIVGLGALKYFILK 461 Query: 437 FDFCK-VKEQSKENPVF------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489 D K + KE+ F ++QY YAR +SI R+A + L VIP Sbjct: 462 VDARKNMTFNPKESIDFNGNTGPFIQYTYARIQSILRKATEA------GLSIPAVIPSGI 515 Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549 E T E LI LA++ +++ A P LA Y YDL ++ + ++ Sbjct: 516 ELSTKEEGLIQMLADFTNIVKQAGTDYNPSILANYAYDLVKEYNQFYHD------FSILR 569 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N L + RL L V ++ + ++G+E P M Sbjct: 570 EENEALKIFRLALSQNVGKVVKLAMGLLGIEVPERM 605 >gi|325262862|ref|ZP_08129598.1| arginine--tRNA ligase [Clostridium sp. D5] gi|324031956|gb|EGB93235.1| arginine--tRNA ligase [Clostridium sp. D5] Length = 588 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 128/608 (21%), Positives = 238/608 (39%), Gaps = 110/608 (18%) Query: 36 RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95 RP C + N AM ++ P IAE ++ ++ + GFINL +SP Sbjct: 33 RPDLCEY---QCNGAMAAAKTYKKAPFVIAEDVLEKLGECSCFEMAEAVKPGFINLKVSP 89 Query: 96 SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155 Y+ L+ + G K + +++ N P+HVGH R A++G+++ Sbjct: 90 VYVAGYLNQMA-DADSLGVEKAAKPDTIMVDYGGPNVAKPLHVGHLRSAIIGESIKRTAR 148 Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG---KE 212 F G++V + ++ D G Q+ + + R Y +++ Y G Y K E Sbjct: 149 FKGHKVIGDIHLGDWGYQMGLIITELEKRKPDLPYFDEA------YEGEYPKEAPFTISE 202 Query: 213 LADKY--SSELLNFPEEKWLPIVKDYSVQA-----------------MMKIIRDDLKA-- 251 L + Y +S EE +D ++QA +M + DLK Sbjct: 203 LEEIYPTASAFAKENEE-----YRDKALQATFLLQNGRRGYRAIWEHIMNVSVADLKKNY 257 Query: 252 --LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 LN++ D++ E D + P D++ L GY + D+ L Sbjct: 258 ENLNVEFDLWKGEADAQKYIP----DMVQRLKEDGYAH----------------YDQGAL 297 Query: 310 LFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYF---KCKYERGFDNMIYVMGSDHSGY 363 + D + P +LKSDG+ Y DLA + Y+ D +IYV+ + Sbjct: 298 VVDVQEEEDKKEVPPCMILKSDGAALYDTTDLATLVEREALYQP--DKLIYVVDKRQELH 355 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 ++ A + ++++ + +DG P K R G + L +++ E+ Sbjct: 356 FVQVFRCAKKTGIVRPEVDMKFLGFGTMNGKDGKPFKT--REGGVMRLENLIREIDEKMY 413 Query: 423 RFMMLWRKNSE-----------LLDFDFCKVKEQSKENPVF--------------YVQYA 457 +M R +E L + + Q+ ++ VF Y+ Y Sbjct: 414 DKIMDNRTVTEAEAQNTARLVGLAAIKYGDLSNQASKDYVFDVDRFTSFEGNTGPYILYT 473 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 R +SI + + D L V +EF+ + L++ ++ VI+ A Sbjct: 474 IVRIKSILNK----YLDGKGTLESLAVKEALTEFEKA---LMLEAVKFNDVIDAAFEESA 526 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 P+K+ Y+YDLA+ F+ + + + + + + L+ V I+ + ++++ Sbjct: 527 PHKICAYIYDLANAFNKFYHE------TKILTEEDEERKAGYIALLKLVKEILETCIDLL 580 Query: 578 GVESPNEM 585 G E+P M Sbjct: 581 GFEAPERM 588 >gi|41055429|ref|NP_956911.1| probable arginyl-tRNA synthetase, mitochondrial [Danio rerio] gi|34784878|gb|AAH56803.1| Arginyl-tRNA synthetase 2, mitochondrial (putative) [Danio rerio] Length = 597 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 147/601 (24%), Positives = 241/601 (40%), Gaps = 110/601 (18%) Query: 44 HLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKIL 102 HL + A+ RP G D + +I+ D V+ + I G+G I+ L+ L +K+L Sbjct: 48 HLLQSGAV---RPDG-DLQNTTHTLARQIRTDAVVEEI-IPGRGVIHFRLNKLLLAQKLL 102 Query: 103 SSIVVSGIEYG-RNLIGKGTKVN---IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158 + +G ++ I + +V +EF S N H GH R ++G+ +A+L G Sbjct: 103 DQLRSDPDGFGVKSEILRQLRVGRTLVEFSSPNIAKKFHAGHLRSTIIGNFIANLKKALG 162 Query: 159 YEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSD-LPEGYYPG--VYL------- 206 EV R Y+ D G Q L S F R+ Q+ L + L E G VYL Sbjct: 163 NEVIRVNYLGDWGMQFGLLG-SGFERFGSQEKLRTQPLEHLFESSVGGCCVYLYGSAVCV 221 Query: 207 -----KHVGKELADKYS--SELLNF------PEEKWLPIVKDYSVQAMMKIIRDDLKALN 253 V +E S S +F EE+ L + + + + + R + L Sbjct: 222 RPQVYVQVNREAESDASVRSAAAHFFRRLEQSEEQALELWRHFREITIHEYKR-IYQRLG 280 Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313 ++ D + S + FHR + + D + + L K T D+ K Sbjct: 281 VEFDHY-SGESFHRAETQTVLDELRSRC---------LLKTSQKGTGVVDLSDK------ 324 Query: 314 TMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA 371 GD + L++SDG+ Y D+A + +R FD MIYV + + ++L + Sbjct: 325 ---GDMSNYATLVRSDGTSLYITRDVAAALDRKQRFSFDEMIYVTDKSQTMHFQQLFRIL 381 Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431 A+ + A C V G+ MS R G+ + L V++E S + M R + Sbjct: 382 QAMGHQWAGS----CHHVAF---GLVQGMSTRRGEVLFLEDVLEEAQSRMIHNMRQSRTS 434 Query: 432 SELLD---------------------------FDFCKVKEQSKENPVFYVQYAYARCRSI 464 EL D F++ KV + + VF +QY +AR S+ Sbjct: 435 KELEDPELTAERIGISALIVQDFKGPLISDYRFEWDKVLQAQGDTGVF-LQYTHARLCSL 493 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 RQ DF D+ + L+ HL Y V+ +P L + Sbjct: 494 LRQQDCEISCSDFSPLT----------DSRSVSLLQHLLRYDEVLLQCATDLQPKHLVNF 543 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 L L+ H S RE P V+ ++ + RL L +V S++ +G+ I+G+ ++ Sbjct: 544 LMTLS---HLVASAHRELP----VKGSSEAVAQARLCLFSSVHSVLANGMRILGITPVDK 596 Query: 585 M 585 M Sbjct: 597 M 597 >gi|51598847|ref|YP_073035.1| arginyl-tRNA synthetase [Borrelia garinii PBi] gi|81609888|sp|Q660S8|SYR_BORGA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|51573418|gb|AAU07443.1| arginyl-tRNA synthetase [Borrelia garinii PBi] Length = 585 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 145/623 (23%), Positives = 258/623 (41%), Gaps = 106/623 (17%) Query: 11 LKNYLKEIDCKIKVEKKI-LDRIVI--ERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 +KN + I + + K I LD+I I ++P G +S LS+ L L TI+E Sbjct: 9 IKNEISIIVANLALSKNIKLDKININIQKPPKSDLGDISI-LIFELSKTLELPIATISEE 67 Query: 68 IVARIKIDPDVDSVFIAGKGFINLYL-SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 I+ +K ++ A ++N+ + Y+ + + YG + K+ +E Sbjct: 68 IIKTLKSKYEIK----AMGPYLNIKIPRKEYINNTIQMVNAQKDSYGTSKYLDNKKIILE 123 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWR 184 F S N P+HVGH R +G++L+ ++ G ++T+ IND G I + LA F Sbjct: 124 FSSPNTNKPLHVGHLRNDAIGESLSRILKAVGAKITKINLINDRGVHICKSMLAYKKFGN 183 Query: 185 Y---QQALYNNDSDLPEGYYPGVYLKHVGK-ELADKYSSELLNFPEEK-------WLPIV 233 ++A D + E Y Y K+ + E A+K +LL E+K W + Sbjct: 184 CITPEKAFKKGDHLIGEFYVE--YNKYSQENENAEKEIQDLLLKWEQKDKNTIELWEKLN 241 Query: 234 KDYSVQAMMKIIRDDLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYE---- 288 K ++++ I++ K NI D I++ + F G ++++ +G+ Y+ Sbjct: 242 K-WAIEG----IKETYKTTNISFDKIYLESEIFEIG-----KNVVLEGLEKGFCYKREDG 291 Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ER 347 I S + +K + KQ + L++S+G+ Y DL + E Sbjct: 292 AICIDLPSDSDEKAEAKAKQ-------------KVLIRSNGTSIYLTQDLGNIAIRTKEF 338 Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406 FD MIYV+GS+ + K L V+ + K Q+ L +V L DG KM R G+ Sbjct: 339 NFDEMIYVVGSEQIQHFKNLFFVSEKLGISKNKQLIHLSHGMVNLI-DG---KMKSREGN 394 Query: 407 FITLRHVVDE-------------------------VGSDSVRFMMLWRKNSELLDFDFCK 441 I +++ E + ++ + +L K++ D F K Sbjct: 395 VIDGDNLILELIESIMPEITQKIDNKENAKKNALNIALGAIHYYLL--KSAVHKDIVFNK 452 Query: 442 VKEQS-KENPVFYVQYAYARCRSIFRQ----AKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 + S N Y+QY AR SI + + I ++F+L E Sbjct: 453 KESLSFTGNSGPYIQYVGARINSILEKYNALSIPIIKKINFELLKH----------EKEW 502 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 ++I ++E I A P L Y Y LA F ++ ++ + NN LT Sbjct: 503 EIIKIISELEENIIKAAKDLNPSILTNYSYSLAKHFSAYYQ------EVKVIDINNTDLT 556 Query: 557 MMRLQLVHAVASIINSGLNIIGV 579 R++ + + I + ++++ + Sbjct: 557 AARIEFLKTILQTIKNCMHLLNI 579 >gi|87306945|ref|ZP_01089091.1| arginyl-tRNA synthetase [Blastopirellula marina DSM 3645] gi|87290318|gb|EAQ82206.1| arginyl-tRNA synthetase [Blastopirellula marina DSM 3645] Length = 654 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 50/143 (34%), Positives = 76/143 (53%), Gaps = 2/143 (1%) Query: 36 RP-RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS 94 RP D G N AM L + LG + IA IV +I + + + IAG GFIN+ L Sbjct: 30 RPASDTKFGDYQANCAMPLKKKLGRESREIAAEIVEKIDLSDMCEPLEIAGPGFINIKLK 89 Query: 95 PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154 +++ L++ V+ G L+ + K ++F S N PMHVGH R V+GD+LA+ + Sbjct: 90 DAWIEAQLAA-AVTDERIGVPLVAEPKKYILDFSSPNVAKPMHVGHIRSTVIGDSLANTL 148 Query: 155 AFSGYEVTREYYINDAGAQINTL 177 F G+EV + ++ D G Q + Sbjct: 149 RFLGHEVITDNHLGDWGTQFGMI 171 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 67/290 (23%), Positives = 118/290 (40%), Gaps = 45/290 (15%) Query: 326 KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 K DG++ Y DLA + + E D ++YV+ + ++L A A ++ + Sbjct: 380 KKDGAFLYATTDLATIQYRMNEWRPDAILYVVDFRQGDHFEKLFAAAKKWGYTDVELKHV 439 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 V + DG P K R+GD + L ++DE S + + + K+ L D + V + Sbjct: 440 SFGTV-MGEDGKPYKT--RSGDTVGLEGLLDEAVSRAEKIVRSNDKDGLLSDEQYKDVAQ 496 Query: 445 -------------QSKE---------------NPVFYVQYAYARCRSIFRQAKDIFPDLD 476 Q++E N Y+QYAYAR +SIFR + L Sbjct: 497 DVGIGGLKYGDLSQNRETDYVFSYDTMLALRGNTATYMQYAYARSQSIFRNGEIDIAAL- 555 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY-DLASVFHGH 535 R+ + +E L + P ++ P +L YL+ +LA + Sbjct: 556 -----RSSGAKICITSPAERALATKVLRLPEALQEMVADYRPNQLTIYLFEELAKAYSTF 610 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + P L+ A ++ RL L A +I GL ++G+ + ++M Sbjct: 611 F---EQCPVLKAETAEQKQ---SRLLLCDLTARVIQQGLALLGISTVDKM 654 >gi|195498652|ref|XP_002096615.1| GE24948 [Drosophila yakuba] gi|194182716|gb|EDW96327.1| GE24948 [Drosophila yakuba] Length = 570 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 118/503 (23%), Positives = 198/503 (39%), Gaps = 89/503 (17%) Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +E+ S N P HVGH R ++G+ LA+L GY TR Y+ D G Q LAL V Sbjct: 115 VEYSSPNIAKPFHVGHLRSTIIGNVLANLHQHLGYRTTRLNYLGDWGTQFGLLALGV--- 171 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE------EKWLPIVKDYSV 238 Q L +D ++ +Y +V A + + E+ E+ + Sbjct: 172 --QLLNVSDKEMQLSPIETLYKSYVAANKAAEQNPEIAQQARDLFSALEEGTDKTMAHQW 229 Query: 239 QAMMKIIRDDLKA----LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294 Q K DDL L + DI+ E + + I+++++ L G+L P Sbjct: 230 QQYRKYTVDDLSKVYSRLGVHFDIYEWESQYSQ---QHIQEVLEKLR-----ISGLLQPE 281 Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMI 353 R +V D P++KSDGS Y A D+A + R F ++ Sbjct: 282 HDG--------------REIVVVDGRRIPVIKSDGSTLYLARDIAALLERLSRFHFSRLL 327 Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 YV+ + + + L +AA+ ++ L E ++ + G MS R G I L+ V Sbjct: 328 YVVDNGQADHFNALFKTSAALDDR------LSLEQLQHVKFGRIHGMSTRQGKAIFLKDV 381 Query: 414 VDE---VGSDSVRFMMLWRKNSELLDFDFCKV-----------KEQSKENPVFY------ 453 +DE + + F R+N L D C + K++ + + F Sbjct: 382 LDEARDIMREKRNFSPTTRENYNLDDEHVCDILGVSAVLVNVLKQRRQRDHEFSWQQALQ 441 Query: 454 --------VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS---ELQLIVHL 502 +QY + R S+ F ++D D ++ P F T L L+ L Sbjct: 442 VNGDTGIKLQYTHCRLHSLLHN----FSEVDLD----DIKPDWKHFATEPADALDLLYAL 493 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 A + + I + E L YL+ L + + R RL Q + + + RL L Sbjct: 494 ARFDQSIWQSKEQLEACVLVNYLFGLCN------ATSRALKRLPVKQEPSLQKQLQRLLL 547 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 +A + G+ ++G+ ++M Sbjct: 548 FYAAKRTLRQGMELLGLRPLDQM 570 >gi|302893154|ref|XP_003045458.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256726384|gb|EEU39745.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 635 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 138/603 (22%), Positives = 245/603 (40%), Gaps = 117/603 (19%) Query: 55 RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL-SSIVVSGIEYG 113 R G P +AE VA+ P ++ +G FI+ + L +L +I YG Sbjct: 78 RVKGKKPGELAEEWVAKFPESPLIEKPTASGP-FISFFFKTDKLTSLLLPTIRNRSDSYG 136 Query: 114 RN-----------LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 +N GK ++ +EF S N P H GH R ++G +ASL +SG++V Sbjct: 137 KNPYNGLKDPSDPSAGK-KRMIVEFSSPNIAKPFHAGHLRSTIIGGFIASLYEYSGWDVV 195 Query: 163 REYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS-- 219 R Y+ D G Q LAL+ W ++AL + P + +Y++ + E++D+ + Sbjct: 196 RMNYLGDWGKQYGLLALAWEKWGDEEALKAD----PINHLFNLYVR-INVEMSDEKEAIE 250 Query: 220 --------------ELLNFPEEKWLPIVKDYSVQAM--------MKIIR--DDLKALNIQ 255 L+ K+ + D +A+ + I+R LNI+ Sbjct: 251 AKKKAGEDVTALLDASLDEQARKYFRRMTDGDEEAVKLWRRFRDLSIVRYKKTYARLNIE 310 Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315 +D++ E D ++ KS T D D L+ S Sbjct: 311 YDVYSGESQVPESDMEEAAKVL---------------AAKSLTE---DADGAILIDFSKH 352 Query: 316 V----GDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRL-- 367 V G +++ +L K DG+ Y D++ + ++ FD++IYV+ S ++K+L Sbjct: 353 VAGKQGKSLEKVILRKKDGTALYLTRDISELLNRQKKYNFDHIIYVVASQQDLHLKQLFK 412 Query: 368 ------------------EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 + +S +K + L +++R + M M K + Sbjct: 413 TIELMGHDDIAKKCQHINFGMVLGMSTRKGTVK-FLDDILRDVAEKMHDVMKKNENKYSQ 471 Query: 410 LRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIF 465 + + V D +G SV + K FD + + P Y+QYA+AR SI Sbjct: 472 IENPEAVADILGISSVMVQDMSGKRINNYKFDMDTMTSFEGDTGP--YLQYAHARLCSIR 529 Query: 466 RQAKDIFPDL---DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 R+A +L DF L SE ++ L+ L+++P V++N EP + Sbjct: 530 RKAGLTDEELAAADFTLL--------SEKHATD--LVRLLSQWPDVVQNTLKTLEPTTIL 579 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 YL+ + V + H LR V + ++L R+ L A ++++G++++G+ Sbjct: 580 TYLFKMTHVLSSSYDH------LRIV-GSEKELQKARMALYDAARIVLHNGMSLLGLTPV 632 Query: 583 NEM 585 M Sbjct: 633 ERM 635 >gi|302417528|ref|XP_003006595.1| arginyl-tRNA synthetase [Verticillium albo-atrum VaMs.102] gi|261354197|gb|EEY16625.1| arginyl-tRNA synthetase [Verticillium albo-atrum VaMs.102] Length = 653 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 123/508 (24%), Positives = 214/508 (42%), Gaps = 86/508 (16%) Query: 119 KGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 KG K + +EF S N P H GH R ++G L+ L A +G++VTR Y+ D G Q L Sbjct: 191 KGQKHMIVEFSSPNIAKPFHAGHLRSTIIGGFLSHLYAGAGWKVTRINYLGDWGKQYGLL 250 Query: 178 ALSVFWRY--QQALYNN------------DSDLPEGYYPGVYLKHVGKELADKYSSELLN 223 AL + +Y ++AL + ++DL E L+ GK+ A + +E L+ Sbjct: 251 ALG-YEKYGDEKALETDPINHLFQVYVKINNDLAEEKEKIAALEKEGKD-ASELKNEGLD 308 Query: 224 FPEEKWLPIVKDYSVQAM--------MKIIR--DDLKALNIQHDIFISEDDFHRGDPSPI 273 ++ + D A+ + I+R LN+ D + E D + Sbjct: 309 EQARRYFKAMNDGEQAALAQWKKFRDLSIVRYKQTYAQLNVTFDEYSGESQVSEEDMAAS 368 Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS-DGSYT 332 +++ V +G + K + G +++P++K DG+ Sbjct: 369 AKTLED-KDISEVSDGAVVINFQKHV-------------AGKAGKSLEKPVIKKRDGTAL 414 Query: 333 YFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRL----EAVAAAVSEKKAQ-INVLLC 386 Y D++ + ++ FD+MIYV+ S ++K+L E + + KK Q +N Sbjct: 415 YLTRDISELLHREKKYNFDHMIYVVASQQDLHLKQLFKIIELMGFTETAKKVQHVNF--- 471 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------VGSDSVRFMMLWRKNSELLDFD 438 GM + MS R G+ + V + + + V+ M R+NS + Sbjct: 472 --------GMVLGMSTRKGNEEKYKQVENPDAVAETLGISAIMVQDMTGKRQNSYTFSLE 523 Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNVIPQESEFDTSELQ 497 E P Y+QYA+AR SI R+A DL D DL +++ ++ + Sbjct: 524 AMTSFE-GDTGP--YLQYAHARLSSIMRKANIPEADLVDADL---SLLTEKHA-----TE 572 Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557 LI L++YP ++N EP + YL+ L V + LR V + L Sbjct: 573 LIRMLSQYPDTVQNTLKTLEPTTVLTYLFKLTHVLSSSYD------VLRVVGSEPEVLK- 625 Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L ++ +++ +G+ ++G+ M Sbjct: 626 ARLALYYSTRTVLANGMRLLGLSPVQRM 653 >gi|325265599|ref|ZP_08132290.1| arginine--tRNA ligase [Kingella denitrificans ATCC 33394] gi|324982947|gb|EGC18568.1| arginine--tRNA ligase [Kingella denitrificans ATCC 33394] Length = 567 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 123/551 (22%), Positives = 224/551 (40%), Gaps = 104/551 (18%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 IV++ ++ G N AM ++ +P +A+ I + +AG GFINL Sbjct: 25 IVLQPAKNPDFGDFQINGAMGAAKAAKQNPRELAQKIADELNGKGAFAVAEVAGPGFINL 84 Query: 92 YLSPSYLRKIL-SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 LSP +L L S+ ++ ++ I++ S N MHVGH R +++GD+L Sbjct: 85 RLSPEFLAAQLEGSLHIAQTPNPDTVV-------IDYSSPNLAKEMHVGHLRSSIIGDSL 137 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A ++ F G++V R+ ++ D G Q L V + +Q N +L Sbjct: 138 ARVLGFLGHKVIRQNHVGDWGTQFGML---VAYLVEQQKDNAAFELA------------- 181 Query: 211 KELADKYSSELLNFPEE-KWLPIVKDYSV------QAMMKIIRDDLKALNIQHDIFISED 263 +L Y + + F E+ + + ++Y V +A++ + R ++ +++QH + Sbjct: 182 -DLEQFYRAAKVRFDEDAAFADLSREYVVKLQGGDEAVLALWRQFVE-ISLQHAEKVYAK 239 Query: 264 ---DFHRGDPSP-------IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313 RGD + + +++ L +G V D D +++F Sbjct: 240 LGLLLERGDVAGESKYNDDLHNVVKELEAKGLV---------------VDSDGAKVVFLD 284 Query: 314 TMVGDDVDRPLL---KSDGSYTYFAADLAYFKCKYERGFDN-MIYVMGSDHSGYVKRLEA 369 D + K G + Y DLA + + N ++YV+ + + K L Sbjct: 285 EFKNKDGEPAAFIVQKQGGGFLYATTDLACLRYRLNMLKANRLLYVVDTRQDLHFKELFV 344 Query: 370 VAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416 A ++ + +D P K R+GD + L ++DE Sbjct: 345 TARKAGWLPENVSAEFVGFGTMMGKDNKPFKT--RSGDTVKLVDLLDEAVERATQLVRSK 402 Query: 417 ---------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461 VG +V++ L + + FD+ + + N Y+QYAY R Sbjct: 403 NPDLSEAEAAKIGQTVGIGAVKYADLSKNRTSDYVFDWDNML-SFEGNTAPYLQYAYTRV 461 Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 +S+FR+A D+D+ V+ + E QL V L ++ V+++ P+ L Sbjct: 462 QSVFRKAG------DWDVQAAFVLTE-----PLEQQLAVELLKFEDVLQSVAETNFPHYL 510 Query: 522 AFYLYDLASVF 532 A YLY LA++F Sbjct: 511 AAYLYQLATLF 521 >gi|270339605|ref|ZP_06005404.2| arginine-tRNA ligase [Prevotella bergensis DSM 17361] gi|270334434|gb|EFA45220.1| arginine-tRNA ligase [Prevotella bergensis DSM 17361] Length = 615 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 131/571 (22%), Positives = 236/571 (41%), Gaps = 109/571 (19%) Query: 82 FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGH 140 F A GF+NL ++P +L+ I +YG + +K V IE+ S N P+H+GH Sbjct: 87 FNAVGGFLNLVIAPDAWIALLNDINADA-KYGETPVSADSKLVMIEYSSPNTNKPLHLGH 145 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R ++G +LA +M +G +V + +ND G I L+ W+ + N++ Sbjct: 146 VRNNLLGWSLAKIMEANGNKVVKTNIVNDRGIHICKSMLA--WKK----WGNNATPESAG 199 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 G +L + D Y + ++ EE V + Q M + + ++ + D + Sbjct: 200 KKGDHL------IGDYYVAFDKHYREE-----VAELKAQLMAEGLGEEEAEEKAKADAPL 248 Query: 261 SED------DFHRGDPSPIRDIIDNLARQGYVYEGILPPPK------------SKT---- 298 + + +GDP +R++ + +VY G K SKT Sbjct: 249 IREAREMLVKWEQGDPE-VRELWQTM--NNWVYAGFDETYKALGVSFDKIYYESKTYLEG 305 Query: 299 TQKCDMD-RKQLLFR-------STMVGDDVDRP-LLKSDGSYTYFAADLAYFKCKY-ERG 348 +K + K L FR + + + +D+ LL+SDG+ Y D+ ++ + Sbjct: 306 KKKVEEGLEKGLFFRKEDNSVWADLTNEGLDQKLLLRSDGTSVYMTQDIGTADLRFKDYP 365 Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC-ELVRLYRDGMP---------- 397 D MIYV+G++ + + + L + + K + V +V L M Sbjct: 366 IDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKDLVHFSYGMVELPNGKMKSREGTVVDAD 425 Query: 398 ------IKMSKRAGDFITLRHVVDE---------VGSDSVRFMML---WRKN-----SEL 434 I+ ++R D + H + E VG ++++ +L RKN E Sbjct: 426 DLIETMIEDARRTSDELGKFHDMAEEEKQEVARIVGLGALKYFILKVDARKNMLFNPEES 485 Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494 +DF+ N ++QY +AR RSI R+A+ + +L P +S + Sbjct: 486 IDFN---------GNTGPFIQYTHARIRSILRKAEAEGITIPAEL------PADSPLNEK 530 Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554 E+ LI L E+ +++A P +A Y Y+L F+ + + A+ Sbjct: 531 EISLIQKLDEFKVAVKDAGENYNPAGIANYCYELTKDFNQFYHD------YSILNADTEA 584 Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL L VA I + + ++G+E P M Sbjct: 585 QKITRLVLAANVAKTIKNAMELLGIEVPERM 615 >gi|152988976|ref|YP_001351107.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa PA7] gi|166232823|sp|A6VDH2|SYR_PSEA7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|150964134|gb|ABR86159.1| arginyl-tRNA synthetase [Pseudomonas aeruginosa PA7] Length = 587 Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 1/146 (0%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E +D +HG ++N AM+L++P G+ P +A +V + + V IAG GF+N Sbjct: 30 IQVENTKDRSHGDFASNIAMMLAKPAGMKPRDLATRLVEALPAHEQLAKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + +L L ++ G G +V I+ S N MHVGH R ++GD +A Sbjct: 90 FQDHIWLAASLDR-ALADERLGVRKAGPAQRVVIDLSSPNLAKEMHVGHLRSTIIGDAVA 148 Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177 ++ F G V R+ ++ D G Q L Sbjct: 149 RVLEFLGDTVIRQNHVGDWGTQFGML 174 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 25/160 (15%) Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 D LR + VG DSV++ L + + F+F ++ + N Y+ YA R S+F Sbjct: 424 DEAQLREIGRVVGIDSVKYADLSKHRTSDYSFNF-ELMLSFEGNTAPYLLYACTRVASVF 482 Query: 466 R---QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 R Q ++ L R V+ Q EL L LA++ ++ N + P+ L Sbjct: 483 RKLGQGRE-------QLGGRIVLEQ-----PQELALAAQLAQFGDLLNNVALKGVPHLLC 530 Query: 523 FYLYDLASVFHGHWSH---------GRENPRLRFVQANNR 553 YLY+LA +F + H +++ RLR R Sbjct: 531 AYLYELAGLFSSFYEHCPILTAEDPAQKDSRLRLAALTGR 570 >gi|224048451|ref|XP_002198225.1| PREDICTED: arginyl-tRNA synthetase 2, mitochondrial (putative) [Taeniopygia guttata] Length = 579 Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 145/604 (24%), Positives = 240/604 (39%), Gaps = 96/604 (15%) Query: 27 KILDRIVIERPRDCAHGHLSTNAAMILSRPLGL--DPLTIAELIVARIKIDPDVDSVFIA 84 K + + + + R A LS + + S GL D A+ + R+K D V S A Sbjct: 27 KSISAVPVSKKRHVADFQLSIASIIENSSGDGLAQDLHLQAQQLAERLKCDSVV-SAISA 85 Query: 85 GKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGT----KVNIEFVSANPTGPMHVG 139 G G +N ++ L K +L + G EYG T K IEF S N H+G Sbjct: 86 GPGTVNFTINRELLAKTVLQQVWKDGSEYGVKSELFSTVPRQKAVIEFSSPNIAKKFHIG 145 Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199 H R +VG+ +A+L G+EV R Y+ D G Q L + F + S L Sbjct: 146 HLRSTMVGNFIANLKVALGHEVVRINYLGDWGMQFGLLGVG-FQSFGNKEKLKSSPLQHL 204 Query: 200 YYPGVYLKHVG-----KELADKYSSELLNFPEEKWLPIVK---DYSVQAMMKIIRDDLKA 251 + V + K+LA + +L E+ L I K D S++ ++I K Sbjct: 205 FEVYVQINQAAEDENIKKLAKDFFRKLEEHDEQT-LSIWKQFRDLSIEEYIRI----YKR 259 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 L + D + E + ++++ L +G + + I K T D+ K+ L Sbjct: 260 LGVHFDEYSGESFYQE----KAQEVLKMLEDKGLLQKTI------KGTGIVDLSEKKDLS 309 Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV 370 + V ++SDG+ Y DLA + + +D MIYV S + + L + Sbjct: 310 TFSTV--------MRSDGTSLYITRDLAAAIDRMNKHSWDTMIYVTDKSQSNHFQHLFQI 361 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430 + A+ C+ V G+ M R G+ I L V++EV S ++ M + Sbjct: 362 LKLMGYDWAE----RCQHVSF---GLVQGMKTRRGEVIFLEDVLNEVRSRMLQNMTSTKT 414 Query: 431 NSELL-------------------------DFDFCKVKE-QSKENPVFYVQYAYARCRSI 464 E+ D+ F + QS+ + ++QY YAR S+ Sbjct: 415 TKEIQDPVETAEKVGLAALIIQDFRGLLSSDYQFSWDRALQSRGDTGVFLQYTYARLHSL 474 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 + + +L NV + S LQ HL Y V+ ++ +P + Y Sbjct: 475 EQMHGNA------ELTDVNVSCLQEPDAISVLQ---HLLRYDEVLYRSSQDLQPKHIVSY 525 Query: 525 LYD---LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 L LA+V H + P V+ + + RL L HA S++ +G+ ++G+ Sbjct: 526 LLTLSHLAAVAH------KTLP----VKGSAPAVAQARLCLFHAARSVLANGMKLLGITP 575 Query: 582 PNEM 585 +M Sbjct: 576 VTQM 579 >gi|71028762|ref|XP_764024.1| arginyl-tRNA synthetase [Theileria parva strain Muguga] gi|68350978|gb|EAN31741.1| arginyl-tRNA synthetase, putative [Theileria parva] Length = 629 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 138/627 (22%), Positives = 245/627 (39%), Gaps = 147/627 (23%) Query: 41 AHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK 100 A HLS N+ P +AE++ + I + S+ ++ +GF+ LS ++ + Sbjct: 56 AKDHLSVNS-----------PQELAEMVKSNITSNS-FSSINVSPQGFMTFVLSNDWIEQ 103 Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL------- 153 + S+ G ++ G V I+F S N MHVGH R V+GD+L +L Sbjct: 104 EIRSLAKYGPSVDKSTKKHGETVVIDFSSPNIAKEMHVGHLRSTVIGDSLGTLHNYLTKY 163 Query: 154 ----------------MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN--NDSD 195 + F GY+V R ++ D G Q L +F +Y + N + SD Sbjct: 164 LYITLLRRIYLFVARVLEFFGYKVRRINHLGDWGTQFGMLIEYMFEKYPDFVSNMPSISD 223 Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFP---EEKWL--PIVKDYSVQAMMKIIRDDLK 250 + Y V +E K S ++ EE L ++ D S+ + +I K Sbjct: 224 FTKFYKEAKLRMDVDEEFKKKSRSRVVKLQSGDEESKLVWKVLCDISLDSFNRI----YK 279 Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 L+I+ +IF E ++ P ++D+ D +A++ EG L + Sbjct: 280 RLDIKFEIF-GESFYNDMIPEIVKDLQDRGIAQES---EGAL-----------------V 318 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLE 368 +F G V L+KSDG + Y + D+A + + +E D +IYV S + ++L Sbjct: 319 IFTD---GSPVPLMLVKSDGGFGYDSTDMACLRYRTHELKADWIIYVTDIGQSEHFQKL- 374 Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPI-------KMSKRAGDFITLRHVVDE----- 416 K AQ+ CE VR+ G + K R+GD + L ++DE Sbjct: 375 -------FKSAQL-AGWCENVRIDHVGFGMVQNELGEKFKTRSGDTVKLVDLLDEAVRRS 426 Query: 417 --------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456 +G SV++ L + F F K+ + + N Y+ Y Sbjct: 427 KLELEKRDPNIPNLDEVAEALGYGSVKYFDLNHSVTTNYKFSFDKMLD-PRGNTAVYMFY 485 Query: 457 AYARCRSIFRQAKD------------------IFPDLDFDLFPRNVIPQESEFDT----- 493 +YAR IF++A+ + + ++ + +P E + Sbjct: 486 SYARICQIFKKAESKTADGTETNNVETSDNRPVIVEDSVEVNGTSSVPNEVDLSKLVIEH 545 Query: 494 -SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552 +E+ L L ++P +++ +L YLY+L+ F ++ + Sbjct: 546 PTEVALAKCLLKFPSILDQIHKDLAINRLTDYLYELSVQFSSFYTK---------CKVVG 596 Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGV 579 L RL L ++ + +IG+ Sbjct: 597 DPLQESRLILCSCTKEVMRTCFQLIGI 623 >gi|15594939|ref|NP_212728.1| arginyl-tRNA synthetase [Borrelia burgdorferi B31] gi|3915064|sp|O51540|SYR_BORBU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|2688523|gb|AAC66956.1| arginyl-tRNA synthetase (argS) [Borrelia burgdorferi B31] Length = 591 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 121/535 (22%), Positives = 218/535 (40%), Gaps = 82/535 (15%) Query: 88 FINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N+ +S Y+ + + YG + K+ +EF S N P+HVGH R V+ Sbjct: 90 YLNIKISRKEYINNTIQMVNTQKDTYGTSKYLDNKKIILEFSSPNTNKPLHVGHLRNDVI 149 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRY---QQALYNNDSDLPEGYY 201 G++L+ ++ G ++T+ IND G I + LA F ++A D + + Y Sbjct: 150 GESLSRILKAVGAKITKINLINDRGVHICKSMLAYKKFGNGITPEKAFKKGDHLIGDFYV 209 Query: 202 PGVYLKHVGK-ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI--IRDDLKALNIQHD- 257 Y K+ + E A+K +LL E+K + ++ + I I++ + N D Sbjct: 210 K--YNKYSQENENAEKEIQDLLLLWEQKDVSTIELWKKLNKWAIEGIKETYEITNTSFDK 267 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPPPKSKTTQKCDMDRKQLLFRS 313 I++ + F G ++++ +G+ Y+ I S + +K D KQ Sbjct: 268 IYLESEIFKIG-----KNVVLEGLEKGFCYKREDGAICIDLPSDSDEKADTKVKQ----- 317 Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAA 372 + L++S+G+ Y DL + E F+ MIYV+GS+ + K L VA Sbjct: 318 --------KVLIRSNGTSIYLTQDLGNIAVRTKEFNFEEMIYVVGSEQIQHFKSLFFVAE 369 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 + K + + L + DG KM R G+ I +++ + + M +N Sbjct: 370 KLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNVIDADNLISNLIELIIPEMTQKIENK 426 Query: 433 E----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQA 468 E L + +K ++ VF Y+QY AR SI + Sbjct: 427 ESAKKNALNIALGAIHYYLLKSAIHKDIVFNKKESLSFTGNSGPYIQYVGARINSILEKY 486 Query: 469 KD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 K + +DF+L E ++I ++E I NA P L Y Sbjct: 487 KALSIPVMEKIDFELLKH----------EKEWEIIKIISELEENIINAAKDLNPSILTSY 536 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 Y LA F ++ ++ + NN LT R++ + A+ I + + ++ + Sbjct: 537 SYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEFLKAILQTIKNCMYLLNI 585 >gi|224533617|ref|ZP_03674206.1| arginyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a] gi|225548678|ref|ZP_03769725.1| arginyl-tRNA synthetase [Borrelia burgdorferi 94a] gi|224513290|gb|EEF83652.1| arginyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a] gi|225370708|gb|EEH00144.1| arginyl-tRNA synthetase [Borrelia burgdorferi 94a] Length = 585 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 121/535 (22%), Positives = 218/535 (40%), Gaps = 82/535 (15%) Query: 88 FINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N+ +S Y+ + + YG + K+ +EF S N P+HVGH R V+ Sbjct: 84 YLNIKISRKEYINNTIQMVNAQKDTYGTSKYLDNKKIILEFSSPNTNKPLHVGHLRNDVI 143 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRY---QQALYNNDSDLPEGYY 201 G++L+ ++ G ++T+ IND G I + LA F ++A D + + Y Sbjct: 144 GESLSRILKAVGAKITKINLINDRGVHICKSMLAYKKFGNGITPEKAFKKGDHLIGDFYV 203 Query: 202 PGVYLKHVGK-ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI--IRDDLKALNIQHD- 257 Y K+ + E A+K +LL E+K + ++ + I I++ + N D Sbjct: 204 K--YNKYSQENENAEKEIQDLLLLWEQKDVSTIELWKKLNKWAIEGIKETYEITNTSFDK 261 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPPPKSKTTQKCDMDRKQLLFRS 313 I++ + F G ++++ +G+ Y+ I S + +K D KQ Sbjct: 262 IYLESEIFEIG-----KNVVLEGLEKGFCYKREDGAICIDLPSDSDEKADTKVKQ----- 311 Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAA 372 + L++S+G+ Y DL + E F+ MIYV+GS+ + K L VA Sbjct: 312 --------KVLIRSNGTSIYLTQDLGNIAVRTKEFNFEEMIYVVGSEQIQHFKSLFFVAE 363 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 + K + + L + DG KM R G+ I +++ + + M +N Sbjct: 364 KLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNVIDADNLISNLIELIIPEMTQKIENK 420 Query: 433 E----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQA 468 E L + +K ++ VF Y+QY AR SI + Sbjct: 421 ESAKKNALNIALGAIHYYLLKSAIHKDIVFNKKESLSFTGNSGPYIQYVGARINSILEKY 480 Query: 469 KD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 K + +DF+L E ++I ++E I NA P L Y Sbjct: 481 KALSIPVMEKIDFELLKH----------EKEWEIIKIISELEENIINAAKDLNPSILTSY 530 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 Y LA F ++ ++ + NN LT R++ + A+ I + + ++ + Sbjct: 531 SYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEFLKAILQTIKNCMYLLNI 579 >gi|315651308|ref|ZP_07904336.1| arginine--tRNA ligase [Eubacterium saburreum DSM 3986] gi|315486460|gb|EFU76814.1| arginine--tRNA ligase [Eubacterium saburreum DSM 3986] Length = 590 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 130/610 (21%), Positives = 241/610 (39%), Gaps = 112/610 (18%) Query: 36 RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95 RP C + N AM ++ P+ IA +V ++ D + GFIN+ +S Sbjct: 33 RPDLCEY---QCNGAMAAAKVFKKKPIDIANEVVELLRESDSFDKIEAVMPGFININISN 89 Query: 96 SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155 S++ K + + + +YG K+ I++ AN P+H+GH R A++G++L + Sbjct: 90 SFIEKYIKDMS-NAPKYGIEFDSPAKKIIIDYGGANVAKPLHIGHLRSAIIGESLKRMGR 148 Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALY---NNDSDLP----------EGYYP 202 F G + + ++ D G QI + + R +Y N D + P E YP Sbjct: 149 FFGNGMIADVHLGDWGLQIGLIIEELRERKPDLVYFKENYDGEFPKEAPFTLNDLEELYP 208 Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK----ALNIQHDI 258 K E + + E + + P + + +M + +DLK +L + D+ Sbjct: 209 AASKKSKVDEGFRQRAQEATLELQNGYKPYRAIW--RHIMNLSIEDLKKNYGSLLVDFDL 266 Query: 259 FISEDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 + E D P I+D+ D +AR V EG L+ M G Sbjct: 267 WKGESDADPYIPDLIKDLEDRKIAR---VSEG------------------ALVVDIAMDG 305 Query: 318 DDVDRP---LLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSD---HSGYVKRLEA 369 D + P + KSDG+ Y +DL + E+ + D IY+ H R+ Sbjct: 306 DKKELPPCIIRKSDGAALYATSDLGTL-IEREKLYSPDEYIYIADKRQELHYTQFFRVAK 364 Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429 +A V + + + +DG P+K R G + L V+ ++ D+V F + Sbjct: 365 IAGIVPDNHLLKYIGFGTING--KDGKPLKT--RDGGVVRLETVIKDI-EDAV-FAKIKE 418 Query: 430 KNSELLD--------------FDFCKVKEQSKENPVF--------------YVQYAYARC 461 E+ D + + Q+ ++ +F Y+ Y R Sbjct: 419 TRDEVSDEEARNTAKIVGLAAIKYADLSNQAAKDYIFDIDRFTSFEGNTGPYILYTIVRI 478 Query: 462 RSIFRQ------AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515 +SI + K DL IP+E +L + LA Y ++ A Sbjct: 479 KSILEKYYESGNEKVSLNDL--------TIPKED----IHKKLYMELAGYNEIMRAAWTE 526 Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575 P+K+ ++Y +++ F+ + ++ + ++ + L + I+ S +N Sbjct: 527 LAPHKICQFIYSVSNTFNSFYHE------IKILSESDEEKKKGYLATILLTKKILESAIN 580 Query: 576 IIGVESPNEM 585 ++G+E+P++M Sbjct: 581 LLGIEAPDKM 590 >gi|237736640|ref|ZP_04567121.1| arginyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817] gi|229420502|gb|EEO35549.1| arginyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817] Length = 570 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 2/154 (1%) Query: 27 KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK 86 K L +I I + G TN AM+ S+ +G +P IA+ IV + + ++ + IAG Sbjct: 23 KELKKIEISVATNEKFGDFQTNFAMMNSKIIGNNPRAIAQEIVDNLVENSVIEKLEIAGP 82 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GFIN++L YL ++L Y + + + V I+F S N MH+GH R ++ Sbjct: 83 GFINIFLKSEYLGELLKKSREEN--YDFSFLNREGDVVIDFSSPNIAKRMHIGHLRSTII 140 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 GD++A + + GY V + +I D G Q L + Sbjct: 141 GDSIARIYRYLGYHVVADNHIGDWGTQFGKLIIG 174 >gi|169824560|ref|YP_001692171.1| arginyl-tRNA synthetase [Finegoldia magna ATCC 29328] gi|167831365|dbj|BAG08281.1| arginyl-tRNA synthetase [Finegoldia magna ATCC 29328] Length = 564 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 143/618 (23%), Positives = 254/618 (41%), Gaps = 94/618 (15%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 +F +K + D + E++I D +IE P + G + L++ P IA Sbjct: 3 NFKDEVKKIILGFDTGL-TEEEISD--LIEIPPNSEMGDYAF-PVFKLAKTFRKAPNLIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI--EYGRNLIGKGTKV 123 E + + + ++ + G ++N +++ S K++ S++ I ++G + IG G V Sbjct: 59 EELAKKDFENENIKKIANVGP-YVNFFVNNS---KLIESVLTEAIKDDFGSSHIGVGKNV 114 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 ++F S N P H+GH R V+G+ + ++M + T YI D G Q + +S + Sbjct: 115 VLDFSSTNIAKPFHIGHLRSTVIGNAIRNIMKHQDFNTTGVNYIGDYGTQFGMM-ISAYL 173 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV--KDYSVQAM 241 ++ N + E V V KE + Y E + W + KD + + Sbjct: 174 KWGDEDKINADPIKELLNLYVKYNKVAKE-DEAYMDEARD-----WFDKLEKKDPTAVKL 227 Query: 242 MKIIRD-DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 R+ LK +D+ + D G+ + I D L Sbjct: 228 WSWFREISLKEFQRVYDLLGVKFDNFNGESFHSQFIGDALEA------------------ 269 Query: 301 KCDMDRKQLLFRS----TMVGDDVDRP---LLKSDGSYTYFAADLA---YFKCKYERGFD 350 +D+K LL S + DD + P + KS+GS TY D+A Y K Y+ F Sbjct: 270 ---IDKKNLLEESDGAMIINLDDENLPPVLIKKSNGSSTYLTRDIATAMYRKKTYD--FY 324 Query: 351 NMIYVMGSDHSGYVKRLEAVA----------------AAVSEKKAQIN------VLLCEL 388 +YV+ S + ++L AV VS K + + L ++ Sbjct: 325 KNVYVVASQQKLHFEQLRAVLKKMGFDWWNDCEHVSFGMVSMKDGSMKTREGKVIFLEDV 384 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 + D + +R + V +VG +V F L+ + FD+ +V E Sbjct: 385 LNRAIDKTKSIIEERNPNLEHKEEVAKQVGVGAVIFQDLFNNRIKDYTFDWDQVLNFDGE 444 Query: 449 NPVFYVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 Y QY +AR SI + + ++ + FDL D +E+ ++ HL+++ Sbjct: 445 TGP-YTQYTFARSCSILDKGEFELKDNSKFDLL----------VDDTEIDIVKHLSKFDE 493 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 V+ NAT EP L Y +LA +F+ ++ N + V+ +L RL L + V Sbjct: 494 VLLNATEKYEPSFLTRYTVELAKLFNKFYA----NCPINTVE---DELKYQRLYLTYCVN 546 Query: 568 SIINSGLNIIGVESPNEM 585 + L+++G+E+P M Sbjct: 547 KCLKLSLSLLGIEAPVRM 564 >gi|228471836|ref|ZP_04056609.1| arginine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624] gi|228276989|gb|EEK15684.1| arginine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624] Length = 596 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 123/572 (21%), Positives = 223/572 (38%), Gaps = 131/572 (22%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT-KVNIEFVSANPTGPMHVGHCRCA 144 KGF+NL + +Y L I +YG+ I K + V +E+ S N P+H+GH R Sbjct: 84 KGFLNLSICENYFLHFLHQIAPEK-DYGKKPITKDSPAVIVEYSSPNTNKPLHLGHIRNN 142 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRYQQALYNND-SDLPEGYY 201 ++G ++A ++ +G +V + IND G I + +A +F + + + D G Y Sbjct: 143 LLGFSMAKIIEATGKKVYKTQIINDRGIHICKSMIAWQLFGKGETPESTGEKGDKLVGKY 202 Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 ++ K +E+A S+ E+ PI Q M+++ Sbjct: 203 YVLFDKAYKEEIAGLISAGKTKEEAEREAPIF--LKAQEMLRL----------------- 243 Query: 262 EDDFHRGDPSPIRDIIDNLARQ--GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319 + +GDP + L RQ +VY+G + DR + ++G D Sbjct: 244 ---WEQGDPETLA-----LWRQMNQWVYDGF---EVTYHNLGVSFDRNYYESETYLLGKD 292 Query: 320 V----------------------------DRPLLKSDGSYTYFAADLAYFKCKYERGF-- 349 + ++ +L+SDG+ Y DL + E F Sbjct: 293 IVQRGLDEGVFYRKEDGSVWIDLTAEGLDEKLVLRSDGTSVYITQDLGTATKRIEEDFPK 352 Query: 350 -DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDF 407 + MIY +G++ + K L + + A+ + L +V L KM R G Sbjct: 353 VEGMIYTVGNEQDYHFKVLFLILQKLGYTWAKNLYHLSYGMVELPNG----KMKSREGTV 408 Query: 408 ITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFD 438 + +++E +G ++++ +L + + F+ Sbjct: 409 VDADDLMEEMVQVAQELSQELGKLEGYSDQQKEQLYRVIGLGALKYYILKVDPKKKIAFN 468 Query: 439 FCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497 + + Q P ++QY YAR +SI R+A+ +P+ E + Sbjct: 469 PQESIDFQGNTGP--FIQYTYARIQSILRRAETC------------ELPKSVSLHPKEKE 514 Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH----GRENPRLRFVQANNR 553 LI L+ +P V++NA P +A Y+YDL F+ + + G E+ R Sbjct: 515 LIKLLSLFPEVVQNAADTYSPALIANYVYDLVKEFNSFYQNVSILGEEDTDKR------- 567 Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +R+ L V +I G +++G+E P M Sbjct: 568 ---SLRVHLSRKVGEVIAIGFDLLGIEVPERM 596 >gi|325860461|ref|ZP_08173573.1| arginine--tRNA ligase [Prevotella denticola CRIS 18C-A] gi|325482119|gb|EGC85140.1| arginine--tRNA ligase [Prevotella denticola CRIS 18C-A] Length = 606 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 128/574 (22%), Positives = 233/574 (40%), Gaps = 122/574 (21%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 KGF+NL ++ + +L+ I + + V IE+ S N P+H+GH R + Sbjct: 81 KGFLNLVIAQAAWTGLLNDINADEKFGEKRVTADSPLVMIEYSSPNTNKPLHLGHVRNNL 140 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRY----QQALYNNDSDLPEGY 200 +G +LA +M +G +V + +ND G I L+ W ++A D + + Y Sbjct: 141 LGWSLAQIMEANGNKVVKTNIVNDRGIHICKSMLAWLKWGNGITPEKAGKKGDHLIGDFY 200 Query: 201 YPGVYLKHVGKE---LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257 ++ KH +E L ++Y E + + A + D + H+ Sbjct: 201 V--LFDKHFKEECRQLQEQYEKEGM--------------TPDAAKEKAEQDAPLIKEAHE 244 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK------------SKT----TQK 301 + + + +GDP +R + + + +VY G K S T +K Sbjct: 245 MLVK---WEQGDPE-VRALWEKM--NSWVYAGFDETYKALGVSFDKIYYESNTYLVGKKK 298 Query: 302 CDMD-RKQLLFR-------STMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKY-ERGFDN 351 + RK L FR + + + +D+ LL + DG+ Y D+ + ++ + D Sbjct: 299 VEEGLRKGLFFRKDDNSVWADLTKEGLDQKLLLRKDGTSVYMTQDIGTAEMRFNDFPIDK 358 Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--- 408 MIYV+G++ + + + L + + K + V + +G KM R G + Sbjct: 359 MIYVVGNEQNYHFQVLSILLDRLGFKWGKDLVHFSYGMVELPNG---KMKSREGTVVDAD 415 Query: 409 -------------------TLRHVVDE--------VGSDSVRFMML---WRKN-----SE 433 L + +E VG ++++ +L RKN E Sbjct: 416 DLVASMIENAKKLSEDKVNKLEGITEEEKNEIARIVGMGALKYFILKVDARKNMLFNPEE 475 Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ--AKDIFPDLDFDLFPRNVIPQESEF 491 +DF+ N ++QY YAR RSI R+ A+DI L P + + ++ Sbjct: 476 SIDFN---------GNTGPFIQYTYARIRSILRKAAAQDI-------LLPAS-LADDAPL 518 Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551 + E++LI L ++ + A I P +A Y Y+L F+ + + A+ Sbjct: 519 NEKEIELIQKLNDFGTAVAQAGIDYSPSGIANYCYELTKEFNQFYHD------YSILSAD 572 Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL L VA +I +G+ ++G+E P M Sbjct: 573 TEAEKITRLVLAKNVAKVIRNGMALLGIEVPERM 606 >gi|224531535|ref|ZP_03672167.1| arginyl-tRNA synthetase [Borrelia valaisiana VS116] gi|224511000|gb|EEF81406.1| arginyl-tRNA synthetase [Borrelia valaisiana VS116] Length = 585 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 140/630 (22%), Positives = 250/630 (39%), Gaps = 104/630 (16%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVI--ERPRDCAHGHLSTNAAMILSRPLGL 59 + + ++K + I + + K I LD+I I ++P G +S LS+ L L Sbjct: 1 MIKNVKKQIKTEISTIVSNLALSKNIKLDKININIQKPPKSDLGDISI-LIFELSKTLQL 59 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKG-FINLYLS-PSYLRKILSSIVVSGIEYGRNLI 117 TI+E I+ +K D I G ++N+ S Y+ + + YG + Sbjct: 60 SIATISEEIIKTLK-----DKYEIKAMGPYLNIKFSRKEYINNTIQMVNTQKDTYGTSKY 114 Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 K+ +EF S N P+HVGH R V+G++L+ ++ G ++T+ IND G I Sbjct: 115 LDNKKIILEFSSPNTNKPLHVGHLRNDVIGESLSRILKAVGAKITKINLINDRGVHICKS 174 Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE------KWLP 231 L+ Y++ + ND + G +L +KYS E N E KW Sbjct: 175 MLA----YKK--FGNDITPEKALKKGDHLIGDFYVKYNKYSQENENAENEIQDLLLKWEQ 228 Query: 232 IVKDYSVQAMMKI--------IRDDLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNLAR 282 KD + + K I++ K N D I++ + F G ++++ Sbjct: 229 --KDVNTIELWKKLNKWAIEGIKETYKITNTSFDKIYLESEIFEIG-----KNVVLEGLE 281 Query: 283 QGYVYE----GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 +G Y+ I + +K D + KQ + L++ +G+ Y DL Sbjct: 282 KGLCYKREDGAICIDLPLDSNEKADTEVKQ-------------KVLIRPNGTSIYLTQDL 328 Query: 339 AYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397 + E FD MIYV+GS+ + K L VA + K Q + L + DG Sbjct: 329 GNITVRIKEFNFDEMIYVVGSEQIQHFKSLFFVAEKLGISKNQKLIHLSHGMVNLIDG-- 386 Query: 398 IKMSKRAGDFITLRHVVDEVGSDS---VRFMMLWRKNSELLDFDFC-------KVKEQSK 447 KM R G+ I +++ ++ + + + ++N++ + + +K Sbjct: 387 -KMKSREGNVIDADNLILDLAESTAPEITQKIEDKENAKKIALNIALGAIHYYLLKSAVH 445 Query: 448 ENPVF--------------YVQYAYARCRSIFRQAKD----IFPDLDFDLFPRNVIPQES 489 ++ VF Y+QY AR SI + I ++ +L Sbjct: 446 KDIVFNKKESLSFTGNSGPYIQYVGARINSILEKYNTLSIPIMEKINLELLKHE------ 499 Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549 E ++I ++E I A P L Y Y LA F ++ ++ + Sbjct: 500 ----KEWEIIKIISELEENIIKAVKDLNPSILTSYSYSLAKHFSAYYQ------EVKVID 549 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 NN LT R++ + A+ I + + ++ + Sbjct: 550 INNTDLTAARIEFLKAILQTIKNCMYLLNI 579 >gi|302854025|ref|XP_002958524.1| hypothetical protein VOLCADRAFT_108162 [Volvox carteri f. nagariensis] gi|300256171|gb|EFJ40444.1| hypothetical protein VOLCADRAFT_108162 [Volvox carteri f. nagariensis] Length = 656 Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 127/525 (24%), Positives = 208/525 (39%), Gaps = 108/525 (20%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A IV + + + +AG GFIN+ LS L LS ++V G+ G Sbjct: 69 PRDVATAIVGALPANGLIAETSLAGPGFINIRLSRDSLSTRLSEMLVKGLASWAPTGYIG 128 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA-- 178 KV I+F S N MHVGH R ++GDTL + + G +V R ++ D G Q L Sbjct: 129 KKVVIDFSSPNVAKEMHVGHLRSTIIGDTLCRIFEYCGADVLRLNHVGDWGTQFGMLIEH 188 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 ++ R + A D D+ E +L + Y + F EE+ K + Sbjct: 189 MADARRLRVAAGGEDKDMDEDV----------ADLQELYRAAKKRFDEEEEF---KTRAR 235 Query: 239 QAMMKIIRDDLKAL-NIQHDIFISEDDF------------HRGDP--SP-IRDIIDNLAR 282 +A+ ++ D ++L + Q S +F RG+ +P ++D+++ L Sbjct: 236 EAVTRLQSGDPESLASWQRICAASRREFEAIYSRLGVTLQERGESFYNPMLKDVVEEL-- 293 Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342 K+ D + G V + KSDG + Y + D+A K Sbjct: 294 ------------KAAGVATIDNGAACVFVE----GQSVPLIVQKSDGGFGYASTDMAAIK 337 Query: 343 CKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAA----VSEKKAQINVLLCELVRLYRDGMP 397 + E D +IYV S + + + A A V +++ + LV L DG Sbjct: 338 HRLNEEKADWIIYVTDVGQSQHFELVFAAAKKAGWLVDGSGPKVSHVGFGLV-LGEDGK- 395 Query: 398 IKMSKRAGDFITLRHVVDE-------------------------------VGSDSVRFMM 426 + R+GD + L ++DE +G +V++ Sbjct: 396 -RFRTRSGDLVRLVELLDEAKSRCAATIRERRAEAGEEVNEAEVEDAACAMGYGAVKYAD 454 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA-KDIF---PDLDFDL-FP 481 L + F F ++ K N Y+ YA+AR I R+A KD++ D L P Sbjct: 455 LKNHRTTNYKFSFDEML-NLKGNTAVYLLYAHARIAGIVRKADKDVYALAADTPISLDHP 513 Query: 482 RNVIPQESEFDTS--------------ELQLIVHLAEYPRVIENA 512 +++ P S F S EL+L +HL + P +E+A Sbjct: 514 KHLYPSPSLFWPSHATVTATYFSPRLQELELALHLCKLPEALEDA 558 >gi|255546293|ref|XP_002514206.1| arginyl-tRNA synthetase, putative [Ricinus communis] gi|223546662|gb|EEF48160.1| arginyl-tRNA synthetase, putative [Ricinus communis] Length = 592 Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 128/577 (22%), Positives = 229/577 (39%), Gaps = 120/577 (20%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGK 119 P + + I+ + ++S +AG GF+N+ LS ++ K + +++ GI+ + L+ K Sbjct: 72 PPAVGQAIMKNLPPSEVIESCSVAGPGFVNVVLSKKWMSKKIQKMLIDGIDSWAPKLLVK 131 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA- 178 + ++F S N MHVGH R ++GDTLA ++ FS +V R ++ D G Q L Sbjct: 132 --RAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSKVDVLRRNHVGDWGTQFGMLIE 189 Query: 179 -------------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 L F++ + ++ DS+ E V G+ KY Sbjct: 190 FLFEKFPNFEDVNERAIGDLQAFYKASKQRFDADSEFKERAQKAVVRLQGGE---PKY-- 244 Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279 + W I D S + K+ + L +Q + E +P I IID Sbjct: 245 ------RQAWAQIC-DISRKEFDKV----YQRLGVQ----LEEKGESFYNPY-IPGIIDA 288 Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339 L+ QG V E + +++F + G ++ ++KSDG + Y + DL Sbjct: 289 LSNQGLVEES---------------EGARVIF---IEGVNIPLIVVKSDGGFNYASTDLT 330 Query: 340 --YFKCKYERGFDNMIYVMGSDHSGY-------VKRLEAVAA---------------AVS 375 +++ E+ + +IYV + KR + A + Sbjct: 331 ALWYRLNEEKA-EWIIYVTDVGQQQHFDMVFKAAKRASWLPADDSMFPKASHVGFGLVLG 389 Query: 376 EKKAQINVLLCELVRLY--------RDGMPIKMSKRAGDFI--TLRHVVDEVGSDSVRFM 425 + + E+VRL R + +A ++ L + + +G +V++ Sbjct: 390 DDGKRFRTRATEVVRLVDLLDEAKTRSKAVLVERGKAEEWTEQELEQIAEAIGYGAVKYA 449 Query: 426 MLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 L KN+ L ++ F + K N Y+ YA+AR SI R++ +L V Sbjct: 450 DL--KNNRLTNYTFNYDQMLNDKGNTAVYLLYAHARICSIIRKSGRDMEEL--KKMGSLV 505 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR--EN 542 + E L +HL ++ +E A P L YLY+L+ F +S+ + E+ Sbjct: 506 LDH-----PDERSLGLHLLQFAETVEEACTNLLPNVLCEYLYNLSEYFTKFYSNCKVVES 560 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 P RL L A A ++ ++G+ Sbjct: 561 PE-----------ETSRLLLCEATAVVMRKCFFLLGI 586 >gi|239623481|ref|ZP_04666512.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239521512|gb|EEQ61378.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 627 Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 120/550 (21%), Positives = 231/550 (42%), Gaps = 87/550 (15%) Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GFINL +S +L + + + + + G K V +++ AN P+HVGH R A++ Sbjct: 114 GFINLKVSGQFLAEYMVRMAAAD-KLGLEAPEKPETVIVDYGGANVAKPLHVGHLRAAII 172 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS---DLP------ 197 G+++ + F G+ + ++ D G Q+ + + R +Y ++S + P Sbjct: 173 GESIKRMGRFLGHRTIGDVHLGDWGLQMGLIIEELRDRKPGLVYFDESFTGEFPAEAPFT 232 Query: 198 ----EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA-- 251 E YP K E + + + ++ + P + Q +M + +DLK Sbjct: 233 ISELEEIYPAASAKSKTDEAFKERAHQATLKLQKGYAPFRAIW--QHIMSVSVEDLKKNY 290 Query: 252 --LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE--GILPPPKSKTTQKCDMDRK 307 LN++ D++ E D +P I D+I L +G YE G L ++ T D K Sbjct: 291 SNLNVEFDLWKGESD---AEPY-IADMIQMLVDKGLAYESQGALVVDVAEET-----DSK 341 Query: 308 QLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSGY 363 ++ P L KSDG+ Y +DLA + E+ F D IYV+ + Sbjct: 342 EI------------PPCLIRKSDGASLYATSDLATI-VEREQDFHPDRYIYVVDKRQGMH 388 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 +++ VA K ++ + +DG P K R G + L ++ E+ Sbjct: 389 FEQVFRVAKKAGIVKQDTPMIFLGFGTMNGKDGKPFKT--REGGVMRLETLIAEINEAVY 446 Query: 423 RFMM--LWRKNSE-----------LLDFDFCKVKEQSKENPVF--------------YVQ 455 +M R SE L + + Q+ ++ VF Y+ Sbjct: 447 ARIMEDEERTVSEEEARRTAGIVGLAALKYGDLSNQAVKDYVFDIERFTAFSGNTGPYIL 506 Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515 Y R +SI + ++ + D +N++P ++ SE L++ ++ Y V+E+ Sbjct: 507 YTIVRIKSILNKYRENGGIVSEDALEKNILPAAND---SEKALMLLISRYNEVLESGFAE 563 Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575 P+K+ Y+Y+L++ F+ + ++ RK + + L+ ++ + + Sbjct: 564 TAPHKICQYIYELSNAFNSFY----HETKILTEPDEARKDSF--IGLITLAKRVLETCIG 617 Query: 576 IIGVESPNEM 585 ++G+E+P+ M Sbjct: 618 LLGIEAPDRM 627 >gi|29348238|ref|NP_811741.1| arginyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482] gi|253569396|ref|ZP_04846806.1| arginyl-tRNA synthetase [Bacteroides sp. 1_1_6] gi|38372519|sp|Q8A3X5|SYR_BACTN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|29340141|gb|AAO77935.1| arginyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482] gi|251841415|gb|EES69496.1| arginyl-tRNA synthetase [Bacteroides sp. 1_1_6] Length = 597 Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 133/593 (22%), Positives = 248/593 (41%), Gaps = 119/593 (20%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P A+ I +K + + F KGF+NL ++ + ++L+ I S EYG + K Sbjct: 56 PEQTAQEIGEYLKANEPAVAAFNVIKGFLNLTIASATWIELLNEIQ-SDEEYG---LVKA 111 Query: 121 TK----VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176 T+ V IE+ S N P+H+GH R ++G+ LA+++A +G V + +ND G I Sbjct: 112 TETSPLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNRVVKTNIVNDRGIHICK 171 Query: 177 LALSVFWRYQQALYNNDSDLPE----------GYYPGVYLKHVGKELADKYSSELLNFPE 226 L+ W+ Y N + PE G Y + KH ELA+ + Sbjct: 172 SMLA--WKK----YGN-GETPESTGKKGDHLVGDYYVSFDKHYKAELAELMEKGMTKEEA 224 Query: 227 EKWLPIVKDYSVQAMMKIIRDD--LKAL--NIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282 E P++++ + + ++K D ++AL + + ++ D+ +R + D + Sbjct: 225 EAASPLMQE-AREMLVKWEAGDPEVRALWEMMNNWVYAGFDETYR----KMGVGFDKIYY 279 Query: 283 QGYVY-EGILPPPKSKTTQKCDMDRKQLLFRST-------MVGDDVD-RPLLKSDGSYTY 333 + Y EG K K + + K F+ + + +D + LL+ DG+ Y Sbjct: 280 ESNTYLEG-----KEKVMEGLE---KGFFFKKEDGSVWVDLTAEGLDHKLLLRGDGTSVY 331 Query: 334 FAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 D+ K ++ + D MIYV+G++ + + + L + + + + V + Sbjct: 332 MTQDIGTAKLRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKGLVHFSYGMVEL 391 Query: 393 RDGMPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVR 423 +G KM R G + +++E VG +++ Sbjct: 392 PEG---KMKSREGTVVDADDLMEEMVSTAKETSQELGKLDGLTQEEADDIARIVGLGALK 448 Query: 424 FMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IF 472 + +L RKN E +DF+ N ++QY YAR +S+ R+A + + Sbjct: 449 YFILKVDARKNMTFNPKESIDFN---------GNTGPFIQYTYARIQSVLRKAAESGIVI 499 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 P+ IP E E LI +A++ V++ A P +A Y YDL + Sbjct: 500 PEQ---------IPAGIELSEKEEGLIQLVADFAAVVKQAGEDYSPSIIANYTYDLVKEY 550 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + ++ N + + R+ L VA ++ G+ ++G+E P+ M Sbjct: 551 NQFYHD------FSILREENEAVKVFRIALSANVAKVVRLGMGLLGIEVPSRM 597 >gi|323348256|gb|EGA82505.1| Msr1p [Saccharomyces cerevisiae Lalvin QA23] Length = 624 Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 125/523 (23%), Positives = 211/523 (40%), Gaps = 99/523 (18%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIG 118 DP+ +A + + V G F+ +L YL + + +I++ +YG+ Sbjct: 118 DPVAVANRWAIELSTHGCIGKVCAKGP-FLQFFLDQRYLIQSTVPNILLQKGKYGQKKSR 176 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KV +EF S N P H GH R ++G L++L G+ VTR Y+ D G Q LA Sbjct: 177 HQKKVVVEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEAMGWSVTRMNYLGDWGRQFGLLA 236 Query: 179 LSVFWRY--QQALYNNDSDLPEGYYPGVYLKHVGKELADK---------YSSELLNF--- 224 + F RY ++ L P + VY+K + +LA + S E +F Sbjct: 237 VG-FKRYGDEKTLQKQ----PIQHLFDVYVK-INMDLAKEEINGNSKCGISGEARSFFKN 290 Query: 225 ---PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII--DN 279 +E + I + ++ I+ LNI DIF E + + DI +N Sbjct: 291 LENGDENAIKIWNRFRSLSIHHYIQ-TYSRLNINFDIFSGESQVSKESMNEALDIFRKNN 349 Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL- 338 L ++ +G L +D Q S +G V + KSDG+ Y D+ Sbjct: 350 LVKE---IDGALV-----------IDLTQW---SKRLGRVV---VQKSDGTTLYLTRDVG 389 Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 A + K FD M+YV+ S Y+ + + ++N + ++ GM Sbjct: 390 AAIERKKNLHFDKMVYVISSQQDLYMSQFFMIL-------KKMNFEWAKDLQHINFGMVQ 442 Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWR--------------------------KNS 432 MS R G+ + L ++DE +++ M + K+ Sbjct: 443 GMSTRKGNVVFLDTILDEARDKALQIMENNKMKISQVDNPQRVADLIGVSAIIIQDMKSK 502 Query: 433 ELLDFDFCKVKEQSKENPVF-YVQYAYARCRSIFRQAKDIFPDL----DFDLFPRNVIPQ 487 + +++F + S E Y+QY ++R RS+ R + D D+ DF Sbjct: 503 RINNYEFNWNRMLSFEGDTGPYLQYTHSRLRSLERTSSDFTTDMLIRADF---------- 552 Query: 488 ESEFDTSEL-QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 S + +L +L+ LA+YP V+ A QEP + YL+ + Sbjct: 553 -SNLNEPQLVELVRLLAQYPDVLRRAFETQEPATIVTYLFKVC 594 >gi|313906013|ref|ZP_07839366.1| arginyl-tRNA synthetase [Eubacterium cellulosolvens 6] gi|313469126|gb|EFR64475.1| arginyl-tRNA synthetase [Eubacterium cellulosolvens 6] Length = 588 Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 128/614 (20%), Positives = 249/614 (40%), Gaps = 100/614 (16%) Query: 25 EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84 +KK + RP C + N AM + G P+ IA +V +K +SV Sbjct: 22 DKKYARVTISNRPDLCEY---QCNGAMAAKKEYGKAPIQIANEVVEGMKDSEVFESVEAV 78 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNL----IGKGTKVNIEFVSANPTGPMHVGH 140 GFINL +S YL + + +G E NL + + V I++ N P+HVGH Sbjct: 79 MPGFINLKVSSEYLGAYIDKM--AGDE---NLSVEPVSEPKTVVIDYGGPNVAKPLHVGH 133 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R A++G+++ + G + + ++ D G Q+ + + R + Y ++S EG Sbjct: 134 LRSAIIGESIKRMGRRLGDHMIGDVHLGDWGLQMGLIITELQERKPELPYFDES--FEGE 191 Query: 201 YP-----------GVYLKHVGKELADK-YSSELLNFPEE-----KWLPIVKDYSVQAMMK 243 YP +Y GK D+ Y + L E + + + + + Sbjct: 192 YPEEAPFTISELEEIYPTASGKSKEDESYKEKALQATAELQAGRRGYRAIWKHIINVSVS 251 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 ++ + + L++ D++ E D P ++D + + G+ YE Sbjct: 252 DLKKNYQKLDVDFDLWNGESDAQPYIPP----MVDKMKKDGFAYE--------------- 292 Query: 304 MDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYF-KCKYERGFDNMIYVMGSD 359 D+ L+ D + P +LKSDG+ Y DLA + + + D ++YV+ D Sbjct: 293 -DQGALIVDVAEETDQKEVPPCMILKSDGAALYTTTDLATIVQRRDDYKPDEILYVV--D 349 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHVVDE 416 + ++ A N+ L +DG P K R G + L +++ + Sbjct: 350 KRQEMHFIQTFRCARKTGLVDDNLKFSFLGFGTMNGKDGKPFKT--REGGVMRLENLIRD 407 Query: 417 VGSDSVRFMMLWR--------KNSELLDFDFCK---VKEQSKENPVF------------- 452 + + + ++ R K ++++ K + Q+ ++ VF Sbjct: 408 INEEMFKKIVENRSVKDTDAEKTAQIVGLSAIKYGDLSNQASKDYVFDVDRFTSFEGNTG 467 Query: 453 -YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511 Y+ Y R +SI + F + L +I E E +L++ LA Y + Sbjct: 468 PYILYTIVRIKSIIGK----FAEAGGSLDGAKIIAPAGE---QEKKLMLQLARYNDALTG 520 Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571 A + P++L Y+Y+L++ F+ + + ++ + RKL+ +R L+ ++ Sbjct: 521 AYADKAPHRLCSYIYELSNDFNSFY----HDNKILTEENEERKLSWLR--LLSLAQRVLE 574 Query: 572 SGLNIIGVESPNEM 585 ++++G ++P M Sbjct: 575 DAIHVLGFDAPERM 588 >gi|289606518|emb|CBI61158.1| unnamed protein product [Sordaria macrospora] Length = 123 Score = 84.7 bits (208), Expect = 4e-14, Method: Composition-based stats. Identities = 46/119 (38%), Positives = 69/119 (57%), Gaps = 3/119 (2%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 FA L + D +E++ I +E PRD +HG LSTNAAM+L++P +P Sbjct: 7 FFAHLERALDTLVARGDLPAGLERRA---ITVEPPRDTSHGDLSTNAAMVLAKPAKTNPR 63 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +AEL+VA + P+V + +AG GFINL L+ + R L++I +G +YGR+ G T Sbjct: 64 ALAELLVAELAGLPEVAAASVAGPGFINLTLTDATWRGELTAIAEAGDDYGRSQAGAET 122 >gi|289617811|emb|CBI55676.1| unnamed protein product [Sordaria macrospora] Length = 698 Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 129/582 (22%), Positives = 235/582 (40%), Gaps = 114/582 (19%) Query: 55 RPLGLDPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYLSPSYL-RKILSSIVVSGI 110 R G P +AE A+ PD D +F + ++ ++ S L ++ + G Sbjct: 169 RVKGKKPNELAEEWAAKF---PDTDPLFSKPTVSQVHLSFFIKASPLVNAVIPLVHAKGA 225 Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170 + G+ ++ +EF S N P H GH R ++G L++L A +G++V R Y+ D Sbjct: 226 DKGQK------RIIVEFSSPNIAKPFHAGHLRSTIIGGFLSNLYAGAGWDVIRINYLGDW 279 Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230 IN L ++ R + + + K G++++ + L+ ++ Sbjct: 280 EDPINHL-FQLYVRINTEMTAEKEEFTK-------RKEAGEDVS-ALEANSLDEQARRYF 330 Query: 231 PIVKDYSVQAM--------MKIIR--DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280 + D A+ + I+R D LNI D + E D + Sbjct: 331 KKMTDRDADALAMWKRFRDLSIVRYKDTYARLNIHFDEYSGESQVTE----------DAM 380 Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDR-KQLLFRSTMV----GDDVDRPLL-KSDGSYTYF 334 G + E + C D+ QL+ S ++ G +++PL+ K DG+ Y Sbjct: 381 NEVGKLMED---------KKICKEDKGAQLIDFSELIPGKEGKRLEKPLVRKRDGTALYL 431 Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393 D++ ++E+ FD MIYV+ S ++++L + + K C+ + Sbjct: 432 TRDISELLGRHEKYHFDKMIYVVASAQDLHLRQLFKIIELLGYKDIADK---CQHINF-- 486 Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-----------SELLDFDFCKV 442 G+ + MS R G L ++ +V +D + +M +N +++L V Sbjct: 487 -GLVLGMSTRKGTVKFLDDILRDV-ADKMHEVMKKNENKYSQIEDPLATADVLGISSVMV 544 Query: 443 KEQSKE---NPVF--------------YVQYAYARCRSIFRQA---KDIFPDLDFDLFPR 482 ++ S + N F Y+QYA+AR SI R+A + D L Sbjct: 545 QDMSGKRINNYTFNMETMTSFEGDTGPYLQYAHARLNSIRRKAGVSDEELATADLSLLT- 603 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 +TS + L H+A +P V++N EP + YL+ L + + Sbjct: 604 ---------ETSAINLCRHMAGWPDVVKNTLKTLEPTTVLTYLFKLTHALSSSYDQLQ-- 652 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 V + +L RL L AV +++ +G+ +IG+ SP E Sbjct: 653 -----VVGSEPELMKARLALYTAVQTVLANGMRLIGL-SPVE 688 >gi|282881138|ref|ZP_06289825.1| arginine--tRNA ligase [Prevotella timonensis CRIS 5C-B1] gi|281304942|gb|EFA97015.1| arginine--tRNA ligase [Prevotella timonensis CRIS 5C-B1] Length = 606 Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 138/598 (23%), Positives = 240/598 (40%), Gaps = 128/598 (21%) Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 I EL+V P V S F KGF+NL ++ +L+ I ++G + + + Sbjct: 62 AIGELLVRDC---PAVAS-FNVVKGFLNLNIAKEAWVDLLNDIHADE-KFGEKPVTEDSP 116 Query: 123 -VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 V IE+ S N P+H+GH R ++G +LA +M +G +V + +ND G I L+ Sbjct: 117 LVMIEYSSPNTNKPLHLGHVRNNLLGWSLAQIMEANGNKVVKTNIVNDRGIHICKSMLA- 175 Query: 182 FWRYQQALYNNDSDLPE----------GYYPGVYLKHVGKELADKYSSELLNFPEEKWLP 231 W+ + + PE G Y + KH ELA S + + ++ Sbjct: 176 -WQKW-----GNGETPESSGKKGDHLIGDYYVAFDKHYRAELAALKSKYMADEGLDEETA 229 Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291 K A+MK R A+ ++ + +GD +R + + +VY G Sbjct: 230 ENKAKEESALMKEAR----AMLVK---------WEQGDKE-VRTLWKKM--NSWVYAGFD 273 Query: 292 PPPKS-----------------KTTQKCDMDRKQLLFR-------STMVGDDVDRPLL-K 326 K+ + D + L FR + + + +D+ LL + Sbjct: 274 ETYKALGVGFDKIYYESETYLEGKAKVEDGLNRGLFFRKDDNSVWADLTKEGLDQKLLLR 333 Query: 327 SDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 SDG+ Y D+ + +++ D MIYV+G++ + + + L + + K + Sbjct: 334 SDGTSVYMTQDIGTAEMRFKDFPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGK----- 388 Query: 386 CELVRLYRDGMPI---KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCK 441 ELV + + KM R G + ++ E+ +D+ RK S EL FD Sbjct: 389 -ELVHFSYGMVELPNGKMKSREGTVVDADELITEMIADA-------RKTSDELGKFDDMS 440 Query: 442 VKEQ--------------------SKENPVF--------------YVQYAYARCRSIFRQ 467 +E+ +++N +F ++QY YAR RSI R+ Sbjct: 441 EQEKQDIARIVGLGALKYFILKVDARKNMLFNPEESIDFNGNTGPFIQYTYARIRSIMRK 500 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 A D + P+ + + + E+ LI L +Y V+E A P +A Y Y+ Sbjct: 501 A-----DAEGIKLPQQ-LSTSAPMNDKEIALIQKLNDYRAVVEQAGTDYSPSGIANYCYE 554 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L F+ + + AN+ + RL L VA I + + ++G+E P M Sbjct: 555 LTKDFNQFYHD------YSILNANSEEEKTARLVLAANVAKTIKNAMQLLGIEVPERM 606 >gi|164663129|ref|XP_001732686.1| hypothetical protein MGL_0461 [Malassezia globosa CBS 7966] gi|159106589|gb|EDP45472.1| hypothetical protein MGL_0461 [Malassezia globosa CBS 7966] Length = 630 Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 124/532 (23%), Positives = 213/532 (40%), Gaps = 122/532 (22%) Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG N GKG +EF S N P H GH R ++G LA+L +G++V R Y+ D G Sbjct: 151 YGSNYSGKGKLCLVEFSSPNIAKPFHAGHLRSTIIGAFLANLYEANGWDVKRLNYLGDWG 210 Query: 172 AQINTLALSVFWRY---QQALYNNDSDLPEGYYPGVYLK---------HVGKELAD---K 216 Q LAL WR +Q L N P + VY++ G+++ D + Sbjct: 211 KQFGLLALG--WRRFGDEQKLQEN----PVQHLFDVYVEINKLASEEGGKGEQIHDEARE 264 Query: 217 YSSELLNFPEEKWLPI--VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274 + + + EE L +D S++ ++ LN+ D + E + I Sbjct: 265 FFKGMEDGKEENLLEWERFRDLSIEKY----KETYARLNVHFDEYRGESKVRK---HHIE 317 Query: 275 DIIDNLARQGYVYE---GILPPPKSK-TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 D + L +V G L SK +K ++RK DG+ Sbjct: 318 DTLSKLRTMDFVSREENGALLADLSKFKLEKAVVERK--------------------DGT 357 Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDH----SGYVKRLEAVAAAVSEKKAQ----I 381 Y D+ + +YE+ FD MIYV+ S + + K LE + ++K+++ I Sbjct: 358 PLYLTRDIPEAEQRYEQYKFDKMIYVISSQQDLHCAQFFKILELLGHPWAQKESEGLLHI 417 Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS--------DSVRFMMLW--RKN 431 N GM MS R G + L H++DE + V++ L + Sbjct: 418 NF-----------GMVQGMSTRKGTVVFLDHILDETKEQMHDVMRKNEVKYAQLEDPERT 466 Query: 432 SELLDFDFCKVKEQSKE---NPVF--------------YVQYAYARCRSIFR-QAKD--I 471 ++++ K+++ + + N F Y+QY + R S+ R A+D + Sbjct: 467 ADIVGMTAIKIQDMAGKRINNYTFDWKRMFSFEGDTGPYLQYNHVRLCSMERMNAEDGLV 526 Query: 472 FP--DLDFDLF--PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 P DLDF+ R +P+ L+++ LA++P V+ A+ + + + + Sbjct: 527 LPKEDLDFETMRTERLQVPE-------ALEIVWLLAQWPDVVRTASRDHQASTIVTFCFK 579 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 L W V+ R ++RL L +++S L ++ V Sbjct: 580 LTHAISSAWEK-------LIVKNQERDDALVRLWLYRCAKDVLSSALRLLTV 624 >gi|297829930|ref|XP_002882847.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297328687|gb|EFH59106.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 579 Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 125/569 (21%), Positives = 230/569 (40%), Gaps = 113/569 (19%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 PL +AE +V + V+S +A G++N+ + +++++GIE + Sbjct: 68 PLAVAEALVTNLPTCDMVESCSVAQPGYVNVSIE---------NMLINGIETWAPTLSVK 118 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 V ++F S N MHVGH R ++GDT+A ++ +S EV R ++ D G Q L + Sbjct: 119 RAV-VDFSSPNIAKKMHVGHLRSTIIGDTIARMLEYSNVEVLRRNHVGDWGTQFGMLIEN 177 Query: 181 VFWRY---QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--- 234 +F ++ A+ D+ Y P K+ ++ L+F + +V+ Sbjct: 178 LFEKFPDSNSAMETAIEDIQSLYKPS----------KTKFDAD-LDFKRKAQQAVVRLQG 226 Query: 235 -----DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 + Q + +I R D + + + + E P I ++I+ L +G V E Sbjct: 227 GDPVYHKTWQKLCEISRADYAEIYQRLRVELEEKGESFYKPY-IANMIEELNSKGLVEES 285 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP--LLKSDGSYTYFAADLA--YFKCKY 345 D +++F D P L+KSDG +TY DLA +++ Sbjct: 286 ---------------DGARVMFIK-----DFKNPCMLVKSDGGFTYDTTDLAALWYRLNE 325 Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS------EKKAQINVLLCELVRLYRDGMPIK 399 E+ + +IYV + + R A V E +++ + +V+ DG + Sbjct: 326 EKA-EWIIYVTDAGQQEHFDRFFKAARQVGWLPDNDETYPRVSHVKFGVVK-GEDGK--R 381 Query: 400 MSKRAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRK 430 R + + L ++DE +G +V++ L Sbjct: 382 FRNRDREIVPLADLLDEAKTRSKAALIERAKEKEWTPEELDQTAEAIGYGAVKYADLMNN 441 Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490 S F + K+ + K N Y+ YA+AR SI +++ D+D +L + + Sbjct: 442 ISTDYKFSYDKMLNE-KGNTAVYLLYAHARICSIIKKSG---KDID-ELKKTGKLALDH- 495 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550 +E L +HL ++ +E A P+ L YLYDL+ + +S+ Q Sbjct: 496 --ANERALGLHLLQFAETVEEACTKLLPHILCEYLYDLSEHYTKFYSN---------CQV 544 Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGV 579 N RL L A A ++ +++G+ Sbjct: 545 NGSAEETSRLLLCEATAIVMRKCFHLLGI 573 >gi|282878825|ref|ZP_06287592.1| arginine--tRNA ligase [Prevotella buccalis ATCC 35310] gi|281299033|gb|EFA91435.1| arginine--tRNA ligase [Prevotella buccalis ATCC 35310] Length = 606 Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 137/590 (23%), Positives = 246/590 (41%), Gaps = 112/590 (18%) Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 I EL+V D + F KGF+NL ++ +L+ + + + + Sbjct: 62 AIGELLVR----DCSAVAGFNVVKGFLNLNIAKEAWVGLLNDMHADEKFGEKPVTDQSPL 117 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V IE+ S N P+H+GH R ++G +LA +M +G +V + +ND G I L+ Sbjct: 118 VMIEYSSPNTNKPLHLGHVRNNLLGWSLAQIMQANGNKVVKTNIVNDRGIHICKSMLA-- 175 Query: 183 WRYQQALYNNDSDLPE----------GYYPGVYLKHVGKELAD---------KYSSELLN 223 W L + + PE G Y + KH E+A+ E Sbjct: 176 W-----LKWGNGETPESSGKKGDHLIGDYYVAFDKHYRAEVAELKNKFMTDEGLDEEAAE 230 Query: 224 FPEEKWLPIVKDYSVQAMMKIIRDD--LKAL--NIQHDIFISEDDFHRGDPSPIRDIIDN 279 ++ P++K+ + Q ++K + D ++AL + + ++ D+ ++ + D Sbjct: 231 NKAKEEAPLMKE-ARQMLVKWEQGDEEVRALWQKMNNWVYAGFDETYK----TLGVSFDK 285 Query: 280 LARQGYVY-EGILPPPKSKTTQKCDMDRKQLLFR-------STMVGDDVDRPLL-KSDGS 330 + + Y EG K+K + + K L FR + + + +D+ LL +SDG+ Sbjct: 286 IYYESDTYLEG-----KAKVEEGLE---KGLFFRKDDNSVWADLTQEGLDQKLLLRSDGT 337 Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC-EL 388 Y D+ +++ D MIYV+G++ + + + L + + K + V + Sbjct: 338 SVYMTQDIGTADMRFKDFPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKELVHFSYGM 397 Query: 389 VRL------YRDGMPI--------------KMSKRAGDFITL-----RHVVDEVGSDSVR 423 V L R+G + K S G F + R + VG +++ Sbjct: 398 VELPNGKMKSREGTVVDADELIATMIDDARKTSDELGKFKDMSEEEKREIARVVGLGALK 457 Query: 424 FMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 + +L RKN E +DF+ N ++QY YAR RSI R+A L Sbjct: 458 YFILKVDARKNMLFNPEESIDFN---------GNTGPFIQYTYARIRSIMRKAAAEGMAL 508 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 L P ++ + E+ LI + ++ VIE A P +A Y Y+L F+ Sbjct: 509 PAQL------PTDAPLNDKEIALIQKMNDFGAVIEQAATDYSPSGIANYCYELTKDFNQF 562 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + A+ ++ + RL L + VA II +G+ ++G+E P M Sbjct: 563 YHD------YSILNADTQEEKLTRLVLANNVAKIIKNGMLLLGIEVPERM 606 >gi|46445865|ref|YP_007230.1| arginyl-tRNA synthetase [Candidatus Protochlamydia amoebophila UWE25] gi|81627687|sp|Q6MEP4|SYR_PARUW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|46399506|emb|CAF22955.1| probable arginyl-tRNA synthetase [Candidatus Protochlamydia amoebophila UWE25] Length = 584 Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 51/136 (37%), Positives = 72/136 (52%), Gaps = 2/136 (1%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKI 101 GH N+AM L++ L +P +AE IV ++ P + + IAG GFIN+ S +L K Sbjct: 43 GHYQFNSAMKLAKLLKKNPRQVAEAIVNQLTDSLPPLSKIEIAGPGFINMTFSTDFLSKN 102 Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161 L I++ +G K K+ I+F S N MHVGH R V+GD+LA L F G+ V Sbjct: 103 LD-ILLRDAHFGIPFPEKPEKIIIDFSSPNVAKEMHVGHLRSTVIGDSLARLFEFLGHHV 161 Query: 162 TREYYINDAGAQINTL 177 R ++ D G L Sbjct: 162 IRLNHLGDWGTAFGML 177 Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust. Identities = 69/301 (22%), Positives = 123/301 (40%), Gaps = 53/301 (17%) Query: 317 GDDVDRPLLKSDGSYTYFAADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRL-EAVAAA 373 G+++ + KSDG Y Y D+A Y + +E+G D +IY+ + + + + + +A A Sbjct: 305 GENLPLMIQKSDGGYNYDTTDMAAIYHRIYHEKG-DRLIYITDAGQATHFQMIFKAAEKA 363 Query: 374 VSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITL---------------------- 410 QI V + L DG K R+G+ L Sbjct: 364 KYLDTTQIRVDHVPFGLVLGTDGK--KFRTRSGETEKLIDLLRTAINCADKILSEKNPEM 421 Query: 411 -----RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARCRSI 464 RH+ +G ++++ L + + D+ F + E N ++ YAY R I Sbjct: 422 EESERRHLAKSLGIGAIKYADL--SCNRVGDYTFSYDRMLRFEGNTAAFLMYAYVRIAGI 479 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R+ K P + I E ++E++L +H+ + + P +L Y Sbjct: 480 KRRLKANLPAV----LENTHINLEH---STEIELGLHILRFHETLNLMANDLLPNRLTDY 532 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 LY LA F+ + R V+ ++ T RL L A A ++ GL I+G+ + ++ Sbjct: 533 LYTLAEKFNAFFRDCR-------VEGTPQQNT--RLLLCEATAKVLKQGLTILGLTTVDK 583 Query: 585 M 585 M Sbjct: 584 M 584 >gi|28571570|ref|NP_649745.3| CG10092 [Drosophila melanogaster] gi|19528429|gb|AAL90329.1| RE18459p [Drosophila melanogaster] gi|28381174|gb|AAF54156.2| CG10092 [Drosophila melanogaster] gi|220948032|gb|ACL86559.1| CG10092-PA [synthetic construct] Length = 594 Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 117/508 (23%), Positives = 194/508 (38%), Gaps = 99/508 (19%) Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +E+ S N P HVGH R ++G+ LA+L GY TR Y+ D G Q L L Sbjct: 139 VEYSSPNIAKPFHVGHLRSTIIGNVLANLHEHLGYRTTRLNYLGDWGTQFGLLVLG---- 194 Query: 185 YQQALYNNDSDLPEGYYP--GVYLKHVGKELADKYSSELLNFPEE--------------- 227 N SD P +Y +V A + E+ + Sbjct: 195 ---VQLLNVSDKEMQLSPIETLYKSYVAANKAAEQRPEIAQQARDLFAALEGGTDKSMAK 251 Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287 KW ++Y+++ + K+ L + D + E + + I+D++D L Sbjct: 252 KWQQ-YRNYTIEDLSKVY----NRLGVHFDSYEWESQYSQ---QQIQDVLDKLRS----- 298 Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347 G+L P R +V D P++KS+GS Y A D+A + R Sbjct: 299 AGLLQPEHDG--------------REIVVVDGRRIPVIKSNGSTLYLARDIAALLERLSR 344 Query: 348 -GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406 F ++YV+ + + + L AA+ ++ L E ++ + G MS R G Sbjct: 345 FQFSRLLYVVDNGQADHFNALFKTTAALDDR------LSLEQLQHVKFGRIYGMSTRQGK 398 Query: 407 FITLRHVVDE---VGSDSVRFMMLWRKNSELLDFDFCKV-----------KEQSKENPVF 452 I L+ V+DE + + R+N L D C + K++ + + F Sbjct: 399 AIFLKDVLDEARDIMREKRNISATTRENYNLDDEHVCDILGVSAVLVNVLKQRRQRDHEF 458 Query: 453 YVQYA------------YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS---ELQ 497 Q A Y CR D F D+D D ++ P F T L Sbjct: 459 SWQQALQVNGDTGIKLQYTHCR--LHSLLDNFRDVDLD----DIKPDWKHFSTEPADALD 512 Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557 L+ LA + + + + E L YL+ L + + + RL Q ++ + + Sbjct: 513 LLYALARFDQSVWQSKEQLEACVLVNYLFGLCN------ATSQALKRLPVKQESSLEKQL 566 Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L HA + G+ ++G+ N+M Sbjct: 567 QRLLLFHAAKKTLRHGMELLGLRPLNQM 594 >gi|218249954|ref|YP_002375102.1| arginyl-tRNA synthetase [Borrelia burgdorferi ZS7] gi|226321900|ref|ZP_03797426.1| arginyl-tRNA synthetase [Borrelia burgdorferi Bol26] gi|218165142|gb|ACK75203.1| arginyl-tRNA synthetase [Borrelia burgdorferi ZS7] gi|226233089|gb|EEH31842.1| arginyl-tRNA synthetase [Borrelia burgdorferi Bol26] Length = 585 Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 122/540 (22%), Positives = 220/540 (40%), Gaps = 92/540 (17%) Query: 88 FINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N+ +S Y+ + + YG + K+ +EF S N P+HVGH R V+ Sbjct: 84 YLNIKISRKEYINNTIQMVNAQKDTYGTSKYLDNKKIILEFSSPNTNKPLHVGHLRNDVI 143 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRY---QQALYNNDSDLPEGYY 201 G++L+ ++ G ++T+ IND G I + LA F ++A D + + Y Sbjct: 144 GESLSRILKAVGAKITKINLINDRGVHICKSMLAYKKFGNGITPEKAFKKGDHLIGDFYV 203 Query: 202 PGVYLKHVGK-ELADKYSSELLNFPEEK-------WLPIVKDYSVQAMMKIIRDDLKALN 253 Y K+ + E A+K +LL E+K W + K ++++ I++ + N Sbjct: 204 K--YNKYSQENENAEKEIQDLLLLWEQKDASTIELWKKLNK-WAIEG----IKETYEITN 256 Query: 254 IQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPPPKSKTTQKCDMDRKQ 308 D I++ + F G ++++ +G+ Y+ I S + +K D KQ Sbjct: 257 TSFDKIYLESEIFEIG-----KNVVLEGLEKGFCYKREDGAICIDLPSDSDEKADTKVKQ 311 Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRL 367 + L++S+G+ Y DL + E F+ MIYV+GS+ + K L Sbjct: 312 -------------KVLIRSNGTSIYLTQDLGNIAVRTKEFDFEEMIYVVGSEQIQHFKSL 358 Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 VA + K + + L + DG KM R G+ I +++ + + M Sbjct: 359 FFVAEKLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNVIDADNLISNLIELIIPEMTQ 415 Query: 428 WRKNSE----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRS 463 +N E L + +K ++ VF Y+QY AR S Sbjct: 416 KIENKESAKKNALNIALGAIHYYLLKSAIHKDIVFNKKESLSFTGNSGPYIQYVGARINS 475 Query: 464 IFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 I + K + +DF+L E ++I ++E I NA P Sbjct: 476 ILEKYKALSIPVMEKIDFELLKH----------EKEWEIIKIISELEENIINAAKDLNPS 525 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 L Y Y LA F ++ ++ + NN LT R++ + A+ I + + ++ + Sbjct: 526 ILTSYSYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEFLKAILQTIKNCMYLLNI 579 >gi|325002809|ref|ZP_08123921.1| arginyl-tRNA synthetase [Pseudonocardia sp. P1] Length = 570 Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 129/593 (21%), Positives = 228/593 (38%), Gaps = 132/593 (22%) Query: 38 RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 R N A+ L++ + P +A + + + SV +AG GF+N+ + + Sbjct: 20 RPSGRADFQANGALALAKHAEVPPRDLAAGLADEVSAADVIGSVELAGPGFLNITVPDAM 79 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + +++ + +G +G + +++ + N MHVGH R ++GD L ++ F Sbjct: 80 IWSQVAA-RLGDDRFGVAAPERGRRTVVDYSAPNIAKEMHVGHLRTTIIGDCLVRVLDFL 138 Query: 158 GYEVTREYYINDAGAQINTL-------------------------ALSVFWRYQQALYNN 192 G +V R+ ++ D G Q L AL +R +A + Sbjct: 139 GADVVRQNHLGDWGTQFGMLIQYLDEHPDTTWRLDDLDGNTSAVSALDGLYRNSRATFEA 198 Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252 D+D + V G SE++ E+ + + I D L L Sbjct: 199 DADFADRARRRVVALQSGDPATIAVWSEIVAESEKAF-------------RGIYDRLGVL 245 Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312 + D + E ++ + +D L V +GI D D ++ Sbjct: 246 -LTADDSVGESFYN----PLLTGTVDEL-----VADGI----------AVDSDDALVILS 285 Query: 313 STMVGDDVDR-PLL--KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLE 368 + + G D + PL+ K DG Y Y DLA + + + D ++YV S S + + Sbjct: 286 NEVDGPDGEPVPLMVRKRDGGYGYDTTDLATIRYRIRDLEADRLLYVTDSRQSLHFR--- 342 Query: 369 AVAAAVSEKKAQINVLLCELVR---------LYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 + + A+ L E VR L DG P K RAG + L ++D+ S Sbjct: 343 -----LVFEAARRAGWLTEGVRAEHVPYGTVLGPDGRPFK--TRAGGTVRLMDLLDDAVS 395 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQS----------------------------KENPV 451 + ++ KN +L + ++ EQ+ N Sbjct: 396 RA--RAVVAEKNPDLDPAELDRIAEQAGIGGVKYADLSTSRVKDYAFDVDRMVSFTGNTG 453 Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511 Y+QYA+ R RSI R+A + + + D +E L + L Y V+ + Sbjct: 454 VYLQYAHTRIRSILRRAGE----------GSHAVDGGVALDGAERALALALDSYGEVLVD 503 Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSH----GRENPRLRFVQANNRKLTMMRL 560 +++ EP++L YLY+LA F + G E+P V+ N +L + RL Sbjct: 504 VSMSLEPHRLCGYLYELARAFTSFYEACPVLGSEDP----VRGN--RLALCRL 550 >gi|223888905|ref|ZP_03623496.1| arginyl-tRNA synthetase [Borrelia burgdorferi 64b] gi|223885721|gb|EEF56820.1| arginyl-tRNA synthetase [Borrelia burgdorferi 64b] Length = 585 Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 121/535 (22%), Positives = 217/535 (40%), Gaps = 82/535 (15%) Query: 88 FINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N+ +S Y + + YG + K+ +EF S N P+HVGH R V+ Sbjct: 84 YLNIKISRKEYTNNTIQMVNTQKDTYGTSKYLDNKKIILEFSSPNTNKPLHVGHLRNDVI 143 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRY---QQALYNNDSDLPEGYY 201 G++L+ ++ G ++T+ IND G I + LA F ++A D + + Y Sbjct: 144 GESLSRILKAVGAKITKINLINDRGVHICKSMLAYKKFGNGITPEKAFKKGDHLIGDFYV 203 Query: 202 PGVYLKHVGK-ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI--IRDDLKALNIQHD- 257 Y K+ + E A+K +LL E+K + ++ + I I++ + N D Sbjct: 204 K--YNKYSQENENAEKEIQDLLLLWEQKDVSTIELWKKLNKWAIEGIKETYEITNTSFDK 261 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPPPKSKTTQKCDMDRKQLLFRS 313 I++ + F G ++++ +G+ Y+ I S + +K D KQ Sbjct: 262 IYLESEIFKIG-----KNVVLEGLEKGFCYKREDGAICIDLPSDSDEKADTKVKQ----- 311 Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAA 372 + L++S+G+ Y DL + E F+ MIYV+GS+ + K L VA Sbjct: 312 --------KVLIRSNGTSIYLTQDLGNIAVRTKEFNFEEMIYVVGSEQIQHFKSLFFVAE 363 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 + K + + L + DG KM R G+ I +++ + + M +N Sbjct: 364 KLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNVIDADNLISNLIELIIPEMTQKIENK 420 Query: 433 E----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQA 468 E L + +K ++ VF Y+QY AR SI + Sbjct: 421 ESAKKNALNIALGAIHYYLLKSAIHKDIVFNKKESLSFTGNSGPYIQYVGARINSILEKY 480 Query: 469 KD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 K + +DF+L E ++I ++E I NA P L Y Sbjct: 481 KALSIPVMEKIDFELLKH----------EKEWEIIKIISELEENIINAAKDLNPSILTSY 530 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 Y LA F ++ ++ + NN LT R++ + A+ I + + ++ + Sbjct: 531 SYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEFLKAILQTIKNCMYLLNI 579 >gi|117617648|ref|YP_858536.1| arginyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559055|gb|ABK36003.1| arginyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 581 Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 47/147 (31%), Positives = 78/147 (53%), Gaps = 2/147 (1%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 R+ ++R ++ AHG L+TN AM+L++P +P +A I+ + + V IAG GFIN Sbjct: 29 RVQVDRCKEKAHGDLATNLAMLLAKPARKNPRELAAAIIEHLPASDLIAKVEIAGPGFIN 88 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + PS+L + ++V S + + + V +++ + N M V H R V+GD Sbjct: 89 FFFDPSWLAGQVEAMVASANANVKLPVPQ--TVVVDYSAPNVAKEMAVHHIRSTVLGDVA 146 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTL 177 A + F G++V R +I D G Q L Sbjct: 147 ARALEFLGHKVVRANHIGDWGTQFGML 173 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 69/289 (23%), Positives = 117/289 (40%), Gaps = 46/289 (15%) Query: 326 KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYV-------KRLEAVAAAVSEK 377 KSDG + Y D+A K +YE G D ++Y + S ++ ++ V +V + Sbjct: 310 KSDGGFLYTTTDIACAKYRYETLGADRVMYFIDSRQHQHLMQAWTITRKAGYVPESVPLE 369 Query: 378 KAQINVLLCELVRLY--RDGMPIKM-------SKRAGDFITLRH----------VVDEVG 418 ++L + R Y R G +K+ +RA + R+ VV + Sbjct: 370 HHAFGMMLGKDGRPYKTRSGGTVKLVELLNEAEERASALLESRNSDLSAEEKAQVVHAIA 429 Query: 419 SDSVRFMMLWRKNSE--LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 +V++ L + + + D+D E N Y+QYAY R +SIFR+A +D Sbjct: 430 MGAVKYADLSKNRTTDYIFDWDLMLSFEG---NTAPYLQYAYTRIQSIFRKA-----GVD 481 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 D +VI E +E L L ++ + P+ L YLY+L+ F + Sbjct: 482 ADTLSGHVILNEE----AEEVLAQKLIQFSDAVNGVADKGMPHLLCTYLYELSGNFMTFY 537 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N + RL L A A ++ GL ++G+ + M Sbjct: 538 EACPINK-----DGVDEATRQSRLLLCAATAKVLKLGLGVLGIHTLERM 581 >gi|195445587|ref|XP_002070393.1| GK12028 [Drosophila willistoni] gi|194166478|gb|EDW81379.1| GK12028 [Drosophila willistoni] Length = 575 Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 117/506 (23%), Positives = 198/506 (39%), Gaps = 95/506 (18%) Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EF S N P HVGH R ++G+ LA+L + GY TR Y+ D G Q +A+ V Sbjct: 120 VEFSSPNIAKPFHVGHLRSTIIGNVLANLHQYLGYSTTRLNYLGDWGTQFGLMAVGV--- 176 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHV--GKELAD-----KYSSELLNFPE--------EKW 229 Q +D ++ +Y +V K AD + + EL + E ++W Sbjct: 177 --QLSNVSDEEMKASPIATLYKSYVMANKAAADDPTVAQRARELFSALEAGTDQTMAKQW 234 Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 + Y++ + ++ + L + D + E + + I +++ L G Sbjct: 235 HQ-YRQYTIAELKEVY----ERLGVHFDSYEWESQYSQKQ---ISKVLEQLRSAGL---- 282 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-G 348 +LP R +V D+ P++KSDGS Y A D+A +Y+R Sbjct: 283 LLPEADG---------------RQIVVVDNRRIPVIKSDGSTLYLARDIAAILDRYKRLD 327 Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 F ++YV+ + + + L AA+ K L E ++ + G MS R G I Sbjct: 328 FSRLLYVVDNGQADHFNALFKTVAALDPK------LSLEHLKHVKFGRIHGMSTRQGKAI 381 Query: 409 TLRHVVDE---VGSDSVRFMMLWRKNSELLDFDFCKV-----------KEQSKENPVFYV 454 LR V+DE V + + + NS L D C + K++ + + F Sbjct: 382 FLRDVLDEAKNVMREKRQLSATTKVNSSLDDDLVCDILGVSAVLVNVLKQRRQRDHEFNW 441 Query: 455 QYA------------YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF---DTSELQLI 499 Q A Y CR D F + + V P F L+++ Sbjct: 442 QQALQVNGDTGIKLQYTHCR--LYSLLDNFKHISLE----EVKPSWQHFIQEPIEALEVV 495 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 LA + + + + E L YL+ L + + R RL Q + R Sbjct: 496 YELARFEQSVWQSKEQLEACILVNYLFGLCN------ATSRALKRLPIKQETCTQKQTQR 549 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L A ++ G+ ++G++ N+M Sbjct: 550 LLLFRAAKQTLSKGMELLGLKPLNQM 575 >gi|159902746|ref|YP_001550090.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211] gi|238687135|sp|A9BDF0|SYR_PROM4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|159887922|gb|ABX08136.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211] Length = 603 Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 144/606 (23%), Positives = 239/606 (39%), Gaps = 112/606 (18%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYL 98 G N A+ LS+ L P IAE I+ ++ + D + + IAG GFINL + S L Sbjct: 47 GDFQVNGALALSKILKKAPRKIAEEIIKQLVKNDDFNKLCLKPEIAGPGFINLTIQNSCL 106 Query: 99 RKILSSIVVS---GIEYGRNL-IGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + + + G+ + L K K + ++F S N MHVGH R ++GD++A + Sbjct: 107 TTEICARLNDDHLGVPIAKPLKTHKSLKPIVVDFSSPNIAKEMHVGHLRSTIIGDSIARV 166 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN----NDSDLPEGYYPGVYLKHV 209 + F G+ V R ++ D G Q L + +AL N DL + Y L Sbjct: 167 LEFRGHPVLRLNHVGDWGTQFGMLITYLKLVAPEALTTANAINLGDLVKFYRQAKKLFDE 226 Query: 210 GKELADKYSSELLNF----PEE-KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 + D E++ P+ K ++ D S KI + + DI I+E Sbjct: 227 DETFQDASREEVVRLQNGDPQSLKAWQLLCDQSRIEFEKIYK--------RLDIHITE-- 276 Query: 265 FHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 RG+ ++D+ID+L + + KC +F + G D Sbjct: 277 --RGESFYNQYLQDVIDDLKSTNLLV--------TDNGAKC-------IFLDDITGKD-G 318 Query: 322 RPL----LKSDGSYTYFAADLAYFKCKYER-----GFDNMIYVMGSDHSGYVKRLEAVA- 371 +PL K+DG + Y DLA + + + G +IYV + + + + VA Sbjct: 319 KPLPLIVQKTDGGFNYATTDLAAIRYRLQAYPQGDGACRLIYVTDAGQASHFFAVFQVAR 378 Query: 372 -AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------- 416 A +I + LV+ DG K+ R+GD + L+ ++DE Sbjct: 379 RANWIPNDCRIEHVPFGLVQ-GEDGK--KLKTRSGDTVRLKDLLDEAIIRAKNDLEERLN 435 Query: 417 -----------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459 +G +V++ L + F F ++ + N Y+ YA Sbjct: 436 AEGRKEDQEFINKVSRVIGIAAVKYADLSQNRITNYQFSFNRMLA-LQGNTAPYLLYALV 494 Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 R I R+ + ++ F PQ E L L ++ VI P Sbjct: 495 RIAGINRKGGSLNATINKLTFNE---PQ-------EWMLARELLKFDEVILQVEEELLPN 544 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 +L YL++L+ VF+ + + P L+ N L RL L A I GL ++G+ Sbjct: 545 RLCNYLFELSQVFNRFYD---QVPVLK----ANDSLKASRLALCQLTADTIKLGLKLLGI 597 Query: 580 ESPNEM 585 + + M Sbjct: 598 PTLDRM 603 >gi|225568686|ref|ZP_03777711.1| hypothetical protein CLOHYLEM_04764 [Clostridium hylemonae DSM 15053] gi|225162185|gb|EEG74804.1| hypothetical protein CLOHYLEM_04764 [Clostridium hylemonae DSM 15053] Length = 594 Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 123/598 (20%), Positives = 241/598 (40%), Gaps = 90/598 (15%) Query: 36 RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95 RP C + N AM ++ P IA + A + + GFIN+ L Sbjct: 39 RPDLCEY---QCNGAMAGAKTYRKAPAVIASEVTANLAKSACIKEAEAVNPGFINIRLKE 95 Query: 96 SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155 S++ L+ + G + + + +++ N P+HVGH R A++G++L + Sbjct: 96 SFVADYLNGMNEDHA-LGLSRAEEPKMIIVDYGGPNVAKPLHVGHLRSAIIGESLKRIAR 154 Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP-----------GV 204 G+EV + ++ D G Q+ + + R + Y +DS +G YP + Sbjct: 155 AMGHEVLGDIHLGDWGYQMGLIITELKSRRPELPYFDDS--FDGEYPEDAPFTISELEEI 212 Query: 205 YLKHVGKELADK-YSSELLNFP-----EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y G+ D+ Y + LN + + ++ + + ++ + + L++ D+ Sbjct: 213 YPTASGRAKEDEAYREQALNATYLLQNGHRGYTAIWNHIMNVSVADLKKNYENLDVCFDL 272 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + E D + P D++ L +GY + MD L+ D Sbjct: 273 WKGEADAQKYIP----DMLRRLKEEGYAH----------------MDDGALVIDVQEETD 312 Query: 319 DVDRP---LLKSDGSYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRL--EAVAA 372 + P + KSDG+ Y DLA + E D +IYV+ + ++ A A Sbjct: 313 TKEVPPCMIQKSDGASLYGTTDLATLVQREEDYHPDEIIYVVDKRQELHFVQIFRAAKKA 372 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 + ++ ++ L + +DG P K R G + L +++ E+ + + + R S Sbjct: 373 GIVPEETKLRFLGFGTMN-GKDGKPFKT--REGGVMRLENLIAEIEEEMYKKISDNRTVS 429 Query: 433 E-----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQ 467 E + + + Q+ ++ VF Y+ Y R +SI + Sbjct: 430 EENAARTAKTVGMSAIKYGDLSNQASKDYVFDVDRFTSFEGNTGPYILYTIVRIKSILNK 489 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 ++ L + I + SE L++ A Y VI+ A P+K+ Y+YD Sbjct: 490 YEENGGTL-------SGIKMQGVCSESEKALMLEAARYSEVIQTAFEELAPHKICAYIYD 542 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA+VF+ + ++ + NRK + + L ++ ++ + ++++G E+P M Sbjct: 543 LANVFNRFYHE----TKILAQEDENRKSSCIALLVL--TKRVLEACIDLLGFEAPERM 594 >gi|325299512|ref|YP_004259429.1| Arginyl-tRNA synthetase [Bacteroides salanitronis DSM 18170] gi|324319065|gb|ADY36956.1| Arginyl-tRNA synthetase [Bacteroides salanitronis DSM 18170] Length = 597 Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 130/564 (23%), Positives = 222/564 (39%), Gaps = 111/564 (19%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 KGF+NL ++ +L+ I R K V IE+ S N P+H+GH R + Sbjct: 81 KGFLNLTIASDVWIDLLNRIHADAQWGIRKADEKAPLVMIEYSSPNTNKPLHLGHVRNNL 140 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE------- 198 +G+ LA++MA +G V + +ND G I L+ W L + + PE Sbjct: 141 LGNALANIMAANGNRVVKTNIVNDRGIHICKSMLA--W-----LKYGNGETPESSGKKGD 193 Query: 199 ---GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255 G Y + KH E+A EL+ EK L + + +M+ R+ L+ Sbjct: 194 HLIGDYYVAFDKHYKAEVA-----ELM----EKGLSKEEAEAQSPLMQEAREMLRK---- 240 Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK------------SKT----- 298 + GDP +R + + + +VY G K S T Sbjct: 241 ---------WEAGDPE-VRALWEKM--NNWVYAGFDETYKMMGVSFDKIYYESNTYLEGK 288 Query: 299 TQKCDMDRKQLLFR-------STMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKY-ERGF 349 + + K + +R + + + +D+ LL ++DG+ Y D+ + ++ + Sbjct: 289 KKVLEGLEKGIFYRKEDGSVWADLTPEGLDQKLLLRADGTSVYMTQDIGTAEQRFADYPI 348 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI- 408 D MIYV+G++ + + + L + + + + V + +G KM R G + Sbjct: 349 DKMIYVVGNEQNYHFQVLSILLDKLGFEWGKDLVHFSYGMVELPEG---KMKSREGTVVD 405 Query: 409 ----------TLRHVVDEVGS----------DSVRFMMLWRKNSELLDFDFCK-VKEQSK 447 T + +E+G D R + L +L D K + K Sbjct: 406 ADDLMEAMIQTAKETSNELGKLDGLTQEEADDIARIVGLGALKYFILKVDARKNMTFNPK 465 Query: 448 ENPVF------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501 E+ F ++QY YAR +SI R+A + + VIP E E LI Sbjct: 466 ESIDFNGNTGPFIQYTYARIQSILRKAAEA------GITIPAVIPAGMELTAKEEGLIQM 519 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 LA++ ++ A P LA Y YDL ++ + ++ N L + RL Sbjct: 520 LADFTATVDQAGTDYNPSILANYAYDLVKEYNQFYHD------FSILREENEALKVFRLA 573 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 L V I+ + ++G+E P M Sbjct: 574 LSQNVGKIVKEAMGLLGIEVPERM 597 >gi|216264482|ref|ZP_03436474.1| arginyl-tRNA synthetase [Borrelia burgdorferi 156a] gi|215980955|gb|EEC21762.1| arginyl-tRNA synthetase [Borrelia burgdorferi 156a] Length = 585 Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 122/540 (22%), Positives = 219/540 (40%), Gaps = 92/540 (17%) Query: 88 FINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N+ +S Y+ + + YG + K+ +EF S N P+HVGH R V+ Sbjct: 84 YLNIKISRKEYINNTIQMVNAQKDTYGTSKYLDNKKIILEFSSPNTNKPLHVGHLRNDVI 143 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRY---QQALYNNDSDLPEGYY 201 G++L+ ++ G ++T+ IND G I + LA F ++A D + + Y Sbjct: 144 GESLSRILKAVGAKITKINLINDRGVHICKSMLAYKKFGNGITPEKAFKKGDHLIGDFYV 203 Query: 202 PGVYLKHVGK-ELADKYSSELLNFPEEK-------WLPIVKDYSVQAMMKIIRDDLKALN 253 Y K+ + E A+K +LL E+K W + K ++++ I++ + N Sbjct: 204 K--YNKYSQENENAEKEIQDLLLLWEQKDASTIELWKKLNK-WAIEG----IKETYEITN 256 Query: 254 IQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPPPKSKTTQKCDMDRKQ 308 D I++ + F G ++++ +G+ Y+ I S + +K D KQ Sbjct: 257 TSFDKIYLESEIFEIG-----KNVVLEGLEKGFCYKREDGAICIDLPSDSDEKADTKVKQ 311 Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRL 367 + L++S+G+ Y DL + E F+ MIYV+GS+ + K L Sbjct: 312 -------------KVLIRSNGTSIYLTQDLGNIAVRTKEFNFEEMIYVVGSEQIQHFKSL 358 Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 VA + K + + L + DG KM R G+ I +++ + + M Sbjct: 359 FFVAEKLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNVIDADNLISNLIELIIPEMTQ 415 Query: 428 WRKNSE----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRS 463 +N E L + +K ++ VF Y+QY AR S Sbjct: 416 KIENKESAKKNALNIALGAIHYYLLKSAIHKDIVFNKKESLSFTGNSGPYIQYVGARINS 475 Query: 464 IFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 I + K + +DF L E ++I ++E I NA P Sbjct: 476 ILEKYKALSIPVMEKIDFKLLKH----------EKEWEIIKIISELEENIINAAKDLNPS 525 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 L Y Y LA F ++ ++ + NN LT R++ + A+ I + + ++ + Sbjct: 526 ILTSYSYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEFLKAILQTIKNCMYLLNI 579 >gi|261749271|ref|YP_003256956.1| arginyl-tRNA synthetase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497363|gb|ACX83813.1| arginyl-tRNA synthetase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 586 Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 116/542 (21%), Positives = 227/542 (41%), Gaps = 80/542 (14%) Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GF+N SY +L +++ Y L K + IE+ S N P+H+GH R +++ Sbjct: 82 GFLNFIFKDSYYLYLLINMLNKNF-YDLKLSDKN--IMIEYSSPNANKPLHLGHIRNSLI 138 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP---G 203 G +L+ ++ GY+ T+ IND G I ++ W+ +L +G P G Sbjct: 139 GYSLSEILKMVGYKTTKIQIINDRGIHICKSMIA--WK----------ELGKGESPDRVG 186 Query: 204 VYLKH-VGK--ELADK-YSSELLNFPE-----EKWLPIVKDYSVQAMMKIIRDDLKALNI 254 + H VGK L DK Y E+ F + + ++PI+K + + K D + N+ Sbjct: 187 MKGDHFVGKYYNLFDKIYCEEIQKFSQKNKNNQNYIPILKK-TRNLLKKWESGDPETRNL 245 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 + D + + I D + + VYE K + +K Sbjct: 246 WKRMNKWVYDGFKETYKKLGIIFDQVEYESDVYEIGKNIIKEGFKKGIFFQKKDGSIWVD 305 Query: 315 MVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER--GFDNMIYVMGSDHSGYVKRLEAVA 371 ++ + D+ LL +SD + Y D+ ++ + D +IY++G + + K L + Sbjct: 306 LIKEGFDQKLLLRSDETSVYITQDIGTAVERFRKYDDIDQLIYIVGKEQDYHFKVLFTIL 365 Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPI---KMSKRAGDFITLRHVVDE------------ 416 + + + +L L + + +M R G+ I ++ E Sbjct: 366 KRLGY------IWVKKLTHLSYGMVDLPSGRMKSRKGNIIDADSLISEMSSIVKKNFLKD 419 Query: 417 ------------VGSDSVRFMMLW-RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463 +G ++++ L +L + + + K P Y+QYAY+R RS Sbjct: 420 FPKEEQEKYAEIIGVGAIKYHFLQVDPKKRILFYPDKSIDLKGKTGP--YIQYAYSRIRS 477 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ F L F ++ + E ++I L +YP +++ + P +A Sbjct: 478 IERKF-TFFYSLTHKDF------SNAKLNIHEKKMIKILQKYPLILKKSARDLNPSLVAN 530 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+Y++A +F+ + + R L + +N + + ++H +I+ SG+N++G++ + Sbjct: 531 YIYEVAKIFNHLYQNTRVINPLDIIHSN------ICMNIIHVTGNILKSGMNLLGIKMLD 584 Query: 584 EM 585 M Sbjct: 585 RM 586 >gi|220673255|emb|CAX12336.1| novel protein similar to vertebrate arginyl-tRNA synthetase-like (RARSL, zgc:63702) [Danio rerio] gi|220679527|emb|CAN88095.2| novel protein similar to vertebrate arginyl-tRNA synthetase-like (RARSL, zgc:63702) [Danio rerio] Length = 597 Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 147/602 (24%), Positives = 241/602 (40%), Gaps = 112/602 (18%) Query: 44 HLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKIL 102 HL + A+ RP G D + +I+ D V+ V I G+G I+ L+ L +K+L Sbjct: 48 HLLQSGAV---RPDG-DLQNTTHTLARQIRTDAVVEEV-IPGRGVIHFRLNKLLLAQKLL 102 Query: 103 SSIVVSGIEYG-RNLIGKGTKVN---IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158 + +G ++ I + +V +EF S N H GH R ++G+ +A+L G Sbjct: 103 DQLRSDPDGFGVKSEILRRLRVGRTLVEFSSPNIAKKFHAGHLRSTIIGNFIANLKKALG 162 Query: 159 YEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSD-LPEG---------------Y 200 EV R Y+ D G Q L S F R+ Q+ L + L E Sbjct: 163 NEVIRVNYLGDWGMQFGLLG-SGFERFGSQEKLRTQPLEHLFESSVGGCCVFLYGSAVCV 221 Query: 201 YPGVYLKHVGKELADKYS--SELLNF------PEEKWLPIVKDYSVQAMMKIIRDDLKAL 252 P VY++ V +E S S +F EE+ L + + + + + R + L Sbjct: 222 RPQVYVQ-VNREAESDASVRSAAAHFFRRLEQSEEQALELWRHFREITIHEYKR-IYQRL 279 Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312 ++ D + S + FHR + + D + + L K T D+ K Sbjct: 280 GVEFDHY-SGESFHRAETQTVLDELRSRR---------LLKTSQKGTGVVDLSDK----- 324 Query: 313 STMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV 370 GD + L++SDG+ Y D+A + +R FD MIYV + + ++L + Sbjct: 325 ----GDMSNYATLVRSDGTSLYITRDVAAALDRKQRFSFDEMIYVTDKSQTMHFQQLFRI 380 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430 A+ A C V G+ MS R G+ + L V++E S + M R Sbjct: 381 LQAMGHPWAGS----CHHVAF---GLVQGMSTRRGEVLFLEDVLEEAQSRMIHNMRQSRT 433 Query: 431 NSELLD---------------------------FDFCKVKEQSKENPVFYVQYAYARCRS 463 + EL D F++ KV + + VF +QY +AR S Sbjct: 434 SKELEDPEVTAERIGISALIVQDFKGPLISDYRFEWDKVLQAQGDTGVF-LQYTHARLCS 492 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 + RQ DF D+ + L+ HL Y V+ +P L Sbjct: 493 LLRQQDCEISCSDFSPLT----------DSRSVSLLQHLLRYDEVLLQCATDLQPKHLVN 542 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 +L L+ H S RE P V+ ++ + RL L +V S++ +G+ I+G+ + Sbjct: 543 FLMTLS---HLVASAHRELP----VKGSSEAVAQARLCLFSSVRSVLANGMRILGITPVD 595 Query: 584 EM 585 +M Sbjct: 596 KM 597 >gi|282859911|ref|ZP_06268999.1| arginine--tRNA ligase [Prevotella bivia JCVIHMP010] gi|282587314|gb|EFB92531.1| arginine--tRNA ligase [Prevotella bivia JCVIHMP010] Length = 606 Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 126/580 (21%), Positives = 236/580 (40%), Gaps = 134/580 (23%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN-IEFVSANPTGPMHVGHCRCA 144 KGF+NL ++P+ +L+ I +G + + + +E+ S N P+H+GH R Sbjct: 81 KGFLNLVIAPAAWVGLLNDINTDE-HFGEKAVTDNSPLAMVEYSSPNTNKPLHLGHVRNN 139 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY----NNDSDLPEGY 200 ++G +L+ +M +GY+V + +ND G I L+ + ++ + + D G Sbjct: 140 LLGWSLSQIMEANGYKVVKTNIVNDRGIHICKSMLA-WQKWGEGITPEKAGKKGDHLIGD 198 Query: 201 YPGVYLKHVG---KELADKYSSELLNFPE-----EKWLPIVKDYSVQAMMKIIRDDLKAL 252 + + KH KE+ DK+ +E L+ E EK P++++ Sbjct: 199 FYVAFDKHYRAELKEMTDKFMAEGLSEDEAKAKAEKESPLMQE----------------- 241 Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK------------SKT-- 298 HD+ + + DP +R + + + +VY G K S T Sbjct: 242 --AHDMLVK---WEANDPD-VRALWEKM--NSWVYAGFDETYKALGVSFDKIYYESNTYL 293 Query: 299 --TQKCDMDRKQLLF----RSTMVGDDVD-----RPLLKSDGSYTYFAADLAYFKCKY-E 346 +K + ++ LF +++ D D + LL++DG+ Y D+ + ++ + Sbjct: 294 VGKKKVEEGLEKGLFIRKDDNSVWADLTDEGLDQKLLLRADGTSVYMTQDIGTAQMRFAD 353 Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406 D MIYV+G++ + + + L + + + + V + +G KM R G Sbjct: 354 YPIDKMIYVVGNEQNYHFQVLSILLDRLGFRWGKDLVHFSYGMVELPNG---KMKSREGT 410 Query: 407 FI----------------------TLRHVVDE--------VGSDSVRFMML---WRKN-- 431 + L + +E VG ++++ +L RKN Sbjct: 411 VVDADDLVASMIENAKTLSEDKVNKLEGITEEEKNEIARIVGMGALKYFILKVDARKNML 470 Query: 432 ---SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD---IFPDLDFDLFPRNVI 485 E +DF+ N ++QY YAR RSI R+A+ + P L D P N Sbjct: 471 FNPEESIDFN---------GNTGPFIQYTYARIRSILRKAEAQNIVLPTLLADDAPLN-- 519 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 E++L+ L ++ + A I P +A Y Y+L F+ + Sbjct: 520 -------EKEIELVQKLNDFGAAVAQAGIDYSPSGIANYCYELTKQFNQFYHD------Y 566 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A+ + RL + VA +I +G+ ++G+E P M Sbjct: 567 SILGADTEAEKITRLVIAKNVAKVIKNGMALLGIEVPERM 606 >gi|327402525|ref|YP_004343363.1| arginyl-tRNA synthetase [Fluviicola taffensis DSM 16823] gi|327318033|gb|AEA42525.1| arginyl-tRNA synthetase [Fluviicola taffensis DSM 16823] Length = 631 Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 133/624 (21%), Positives = 240/624 (38%), Gaps = 129/624 (20%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112 L + G P I +++ ++ D S + GF+NL +Y + LS I S + Sbjct: 46 LMKLAGKSPQEIGKVLGDFLRDDIRCISDYSIIGGFLNLSFPNNYWTQQLSEID-SNATF 104 Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172 G ++ +E+ S N P+H+GH R +G ++A ++ G++V + IND G Sbjct: 105 GSAEKNSKPEIMVEYSSPNTNKPLHLGHLRNNFLGYSVAQILDAYGHKVIKTQIINDRGI 164 Query: 173 QINTLALSVFWRYQQALYN-------NDSDLPEGYYPGVYLKHVGKE--------LADKY 217 I L+ W+ L N++ L G Y K+ +A Sbjct: 165 HICKSMLA--WQKFSPLNEKGERENPNNTGLKGDKLVGKYYVEFDKQFNAEAKEIIAQWN 222 Query: 218 SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277 + FPE V Y K+ +D+ + I + + + S +R+ Sbjct: 223 EGQFDGFPE----TTVLKYQEFTDAKVGKDEKAIAGLDDKI----KELAKNETSILREAK 274 Query: 278 DNLAR---------------QGYVYEGILPPPKSKTTQKCDMDRKQLLFRST-------- 314 D L R +VY+G +KT +K ++ +L + S Sbjct: 275 DLLVRWEGRDPEVYLLWTTMNSWVYDGF-----NKTYEKMGVEFDRLYYESDTFILGKDI 329 Query: 315 ---------------------MVGDDVD-RPLLKSDGSYTYFAADLAYFKCKYE--RGFD 350 + G+ +D + LL+SDG+ Y DL ++ Sbjct: 330 VNEGLKKGVLYKKEDSSVWIDLTGEGLDHKLLLRSDGTSVYMTQDLGTAVDRFNDYSELT 389 Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI-KMSKRAGDFIT 409 +IY +G++ + K L + + A+ C + +P KM R G + Sbjct: 390 GIIYTVGNEQDYHFKVLFLILDKLGYSWAKS----CFHLSYGMVDLPSGKMKSREGTVVD 445 Query: 410 LRHVVDEV----------------GSDSVRFMMLWRKNSELLDFDFCKV--KEQSKENPV 451 ++DE+ S++ R ++ L + KV K++ NP Sbjct: 446 ADDLMDEIVQSAQEMTTERGHLDGMSETEREILYKTIGMGGLKYYLLKVDPKKRMMFNPA 505 Query: 452 F----------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501 ++QYA+AR +S+ +A D + +E SE ++I Sbjct: 506 ESIELNGNTGPFIQYAHARIQSLLGKATGFNLDTN------------TELGASEKEIIKQ 553 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 LA YP VIE+A P +A Y Y+L +F+ + + + + ++K +RL Sbjct: 554 LALYPSVIEDAAKTYSPALVANYTYELVKLFNQFYQN------VMILSEEDQKQKAVRLT 607 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 + VA +I S +N++G+ PN+M Sbjct: 608 VCKNVAKVIKSSMNLLGISVPNKM 631 >gi|160884101|ref|ZP_02065104.1| hypothetical protein BACOVA_02077 [Bacteroides ovatus ATCC 8483] gi|156110443|gb|EDO12188.1| hypothetical protein BACOVA_02077 [Bacteroides ovatus ATCC 8483] Length = 605 Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 130/610 (21%), Positives = 246/610 (40%), Gaps = 145/610 (23%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P A+ I +K + + F KGF+NL ++ + ++L+ I +YG + Sbjct: 56 PEQTAQEIGGYLKANDPAVAAFNVIKGFLNLTIASATWIELLNEIQADE-QYGLMQVTDA 114 Query: 121 TK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 + V IE+ S N P+H+GH R ++G+ LA+++A +G +V + +ND G I L Sbjct: 115 SPLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHICKSML 174 Query: 180 SVFWRYQQALYNNDSDLPE----------GYYPGVYLKHVG---KELADKYSSELLNFPE 226 + W+ Y N + PE G Y + KH KEL K++++ ++ E Sbjct: 175 A--WKK----YGN-GETPETSGKKGDHLVGDYYVSFDKHYKAEVKELMAKFTAQGMSGDE 227 Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286 K K + +M+ R+ L + GDP +R + + + +V Sbjct: 228 AK----AKAEAESPLMQEAREMLV-------------KWEAGDPE-VRGLWEMM--NNWV 267 Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRST-----------------------------MVG 317 Y G +T +K + ++ + S + Sbjct: 268 YAGF-----DETYKKMGVSFDKIYYESNTYLEGKEKVMEGLEKGFFYKKEDGSVWADLTA 322 Query: 318 DDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375 + +D + LL+ DG+ Y D+ K ++ + + MIYV+G++ + + + L + + Sbjct: 323 EGLDHKLLLRGDGTSVYMTQDIGTAKLRFADYPINKMIYVVGNEQNYHFQVLSILLDKLG 382 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416 + + V + +G KM R G + +++E Sbjct: 383 FEWGKSLVHFSYGMVELPEG---KMKSREGTVVDADDLMEEMIATAKETSQELGKLDGLT 439 Query: 417 ----------VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAY 458 VG ++++ +L RKN E +DF+ N ++QY Y Sbjct: 440 QEEADDIARIVGLGALKYFILKVDARKNMTFNPKESIDFN---------GNTGPFIQYTY 490 Query: 459 ARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515 AR +S+ R+A + + P+ IP E E LI +A++ V++ A Sbjct: 491 ARIQSVLRKAAESGIVIPEQ---------IPAGIELSEKEEGLIQMVADFAAVVKQAGED 541 Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575 P +A Y YDL ++ + ++ N + + R+ L VA ++ G+N Sbjct: 542 YSPSIIANYTYDLVKEYNQFYHD------YSILREENEAVKVFRIALSANVAKVVRLGMN 595 Query: 576 IIGVESPNEM 585 ++G+E P+ M Sbjct: 596 LLGIEVPSRM 605 >gi|46124397|ref|XP_386752.1| hypothetical protein FG06576.1 [Gibberella zeae PH-1] Length = 635 Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 138/605 (22%), Positives = 245/605 (40%), Gaps = 124/605 (20%) Query: 55 RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYG 113 R G P +AE ++ P ++ +G FI+ + L +L +I YG Sbjct: 78 RVKGKKPGELAEEWASKFPESPLIEKPTASGP-FISFFFKADKLTNMLLPTIRKQASSYG 136 Query: 114 RNLI-----------GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 ++ GK ++ +EF S N P H GH R ++G +ASL +G+EVT Sbjct: 137 KSPYNGLRDPSDPNSGK-KRMIVEFSSPNIAKPFHAGHLRSTIIGGFIASLHESAGWEVT 195 Query: 163 REYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS--- 218 R Y+ D G Q LAL+ W ++AL + P + +Y++ + +++D+ S Sbjct: 196 RLNYLGDWGKQYGLLALAWEKWGDEEALKAD----PINHLFNLYVR-INSDMSDEKSKIK 250 Query: 219 -------------SELLNFPEEKWLPIVKDYSVQAM--------MKIIR--DDLKALNIQ 255 ++ L+ K+ + D +A+ + I+R LNI+ Sbjct: 251 EKQDAGEDVSALEADSLDEQARKYFRRMTDGDKEAVDLWRRFRDLSIVRYKKTYARLNIE 310 Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315 +D + E D +I LA +G D + L+ S Sbjct: 311 YDEYCGESQVPEEDMKKAAEI---LAEKGLTE---------------DANGATLIDFSKH 352 Query: 316 V----GDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEA 369 V G +++ +L K DG+ Y D++ + E+ FD MIYV+ S ++K+L Sbjct: 353 VAGKPGKSLEKVILRKKDGTALYLTRDISELLNRQEKYKFDKMIYVIASQQDLHLKQLFK 412 Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429 + + V C+ + GM + MS R G L ++ +V M R Sbjct: 413 TIELMGHEDI---VKKCQHINF---GMVLGMSTRKGTVKFLDDILRDVAEKMHEVM---R 463 Query: 430 KN-------------SELLDFDFCKVKEQSKE---NPVF--------------YVQYAYA 459 KN +++L V++ S + N F Y+QYA+A Sbjct: 464 KNETKYSQVENPEAVADILGISSVMVQDMSGKRINNYKFDMDVMTSFEGDTGPYLQYAHA 523 Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 R SI R+ D +++ ++ D L+ L+++P V++N EP Sbjct: 524 RLCSIRRKVN--LSDEQLATADYSLLKEKHATD-----LVRLLSQWPDVVQNTLKTLEPT 576 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 + YL+ + V + H LR V + + +L R+ L A ++ +G++++G+ Sbjct: 577 TILTYLFKMTHVLSSSYDH------LRIVGSED-ELQKARMGLYDAARIVLYNGMSLLGL 629 Query: 580 ESPNE 584 SP E Sbjct: 630 -SPVE 633 >gi|119511908|ref|ZP_01631006.1| arginyl-tRNA synthetase [Nodularia spumigena CCY9414] gi|119463404|gb|EAW44343.1| arginyl-tRNA synthetase [Nodularia spumigena CCY9414] Length = 470 Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 118/505 (23%), Positives = 207/505 (40%), Gaps = 81/505 (16%) Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 ++F S N MHVGH R ++GD++A ++ F G++V R ++ D G Q L + Sbjct: 3 VDFSSPNIAKEMHVGHLRSTILGDSIARILEFQGHDVLRLNHVGDWGTQFGMLITYLREV 62 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK-----DYSVQ 239 Y +AL ++ L G Y K A + E F E +V+ + ++ Sbjct: 63 YPEALTTANA-LDIGDLVSFYRK------AKQRFDEDEAFQETARQEVVRLQAGAEDTLH 115 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDP--SPIR-DIIDNLARQGYVYEGILPPPKS 296 A + + I +D+ + RG+ +P+ ++++LA+ G + E Sbjct: 116 AWKLLCEQSRREFQIIYDL-LDVQVIERGESFYNPLLPSVVEDLAKSGLLVEN------- 167 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVD-RPLL--KSDGSYTYFAADLAYFKCKYERG-FDNM 352 Q++F + + PL+ KSDG Y Y DLA + + ++ + Sbjct: 168 --------QGAQVVFLEGFTNREGEPMPLIVQKSDGGYNYATTDLAALRYRIQQDEAKRI 219 Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLR 411 IYV S S + + VA + + ++ + L DG K R+GD + LR Sbjct: 220 IYVTDSGQSNHFAQFFQVARKAGWVRNDVELVHVPFGLVLGEDGK--KFKTRSGDTVRLR 277 Query: 412 HVVDE-------------------------------VGSDSVRFMMLWRKNSELLDFDFC 440 ++DE VG +V++ L + + F + Sbjct: 278 DLLDEAVIRARADLEARLKEEEREETEQFISEVAEIVGISAVKYADLSQNRTSDYIFSYD 337 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500 K+ + K N Y+ YAYAR + I R+ F +L ++ V+ Q +EL L Sbjct: 338 KMLD-LKGNTAPYMLYAYARIQGISRKGGINFAELGENV---KVLLQHE----TELALAK 389 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 +L + VI + P +L YLY+L+ F+ + N +R ++A L RL Sbjct: 390 YLLQLDGVISSVEQELLPNRLCEYLYELSKKFNQFYDR---NQGVRVLEAEE-PLRTSRL 445 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 L A + GL+++G+ M Sbjct: 446 VLCDLTARTLRLGLDLLGIRVLERM 470 >gi|260173135|ref|ZP_05759547.1| arginyl-tRNA synthetase [Bacteroides sp. D2] gi|315921410|ref|ZP_07917650.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313695285|gb|EFS32120.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 605 Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 131/610 (21%), Positives = 246/610 (40%), Gaps = 145/610 (23%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P A+ I +K + + F KGF+NL ++ + ++L+ I +YG + Sbjct: 56 PEQTAQEIGEYLKANDPAVAAFNVIKGFLNLTIASATWIELLNEIQADE-QYGLVQVTDA 114 Query: 121 TK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 + V IE+ S N P+H+GH R ++G+ LA+++A +G +V + +ND G I L Sbjct: 115 SPLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHICKSML 174 Query: 180 SVFWRYQQALYNNDSDLPE----------GYYPGVYLKHVG---KELADKYSSELLNFPE 226 + W+ Y N + PE G Y + KH KEL K++++ ++ E Sbjct: 175 A--WKK----YGN-GETPETSGKKGDHLVGDYYVSFDKHYKAEVKELMAKFTAQGMSDDE 227 Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286 K K S +M+ R+ L + GDP +R + + + +V Sbjct: 228 AK----AKAESESPLMQEAREMLV-------------KWEAGDPE-VRGLWEMM--NNWV 267 Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRST-----------------------------MVG 317 Y G +T +K + ++ + S + Sbjct: 268 YAGF-----DETYKKMGVSFDKIYYESNTYLEGKEKVMEGLEKGFFYKKEDGSVWADLTA 322 Query: 318 DDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375 + +D + LL+ DG+ Y D+ K ++ + + MIYV+G++ + + + L + + Sbjct: 323 EGLDHKLLLRGDGTSVYMTQDIGTAKLRFADYPINKMIYVVGNEQNYHFQVLSILLDKLG 382 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416 + + V + +G KM R G + +++E Sbjct: 383 FEWGKSLVHFSYGMVELPEG---KMKSREGTVVDADDLMEEMIATAKETSQELGKLDGLT 439 Query: 417 ----------VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAY 458 VG ++++ +L RKN E +DF+ N ++QY Y Sbjct: 440 QEEADDIARIVGLGALKYFILKVDARKNMTFNPKESIDFN---------GNTGPFIQYTY 490 Query: 459 ARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515 AR +S+ R+A + + P+ IP E E LI +A++ V++ A Sbjct: 491 ARIQSVLRKAAESGIVIPEQ---------IPTGIELSEKEEGLIQMVADFAAVVKQAGED 541 Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575 P +A Y YDL ++ + ++ N + + R+ L VA ++ G+N Sbjct: 542 YSPSIIANYTYDLVKEYNQFYHD------YSILREENEAVKVFRIALSANVAKVVRLGMN 595 Query: 576 IIGVESPNEM 585 ++G+E P+ M Sbjct: 596 LLGIEVPSRM 605 >gi|307566249|ref|ZP_07628695.1| arginine--tRNA ligase [Prevotella amnii CRIS 21A-A] gi|307345053|gb|EFN90444.1| arginine--tRNA ligase [Prevotella amnii CRIS 21A-A] Length = 606 Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 130/573 (22%), Positives = 232/573 (40%), Gaps = 120/573 (20%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCA 144 KGF+NL +S +L+ I S ++G I K + V +E+ S N P+H+GH R Sbjct: 81 KGFLNLVISSKAWISLLNDIS-SKDKFGEKEITKESPLVMVEYSSPNTNKPLHLGHVRNN 139 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG- 203 ++G +LA +M +G +V + +ND G I L+ + ++ + +S + G Sbjct: 140 LLGWSLARIMEANGNKVIKTNIVNDRGIHICKSMLA-WLKWGNGITPEESGKKGDHLIGD 198 Query: 204 ---VYLKHVGKEL--------ADKYSSELLNFPEEKWLPIVKDY---------------S 237 + KH EL AD S E EK P++K+ S Sbjct: 199 FYVAFDKHYRMELKELTEKFLADGLSEEEAKLRAEKESPLMKEAHEMLVKWEANDPEVRS 258 Query: 238 VQAMMKI-----IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 + A M + KAL + D E + + LA + V EG+ Sbjct: 259 LWAKMNSWVYAGFDETYKALGVSFDKIYYESNTY-------------LAGKKKVEEGL-- 303 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKY-ERGFD 350 K +K D + + + +D+ LL ++DG+ Y D+ + ++ + D Sbjct: 304 -AKGLFIRKDDNS-----VWADLTNEGLDQKLLLRADGTSVYMTQDIGTAQMRFTDYPID 357 Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI-- 408 MIYV+G++ + + + L + + K + V + +G KM R G + Sbjct: 358 KMIYVVGNEQNYHFQVLSILLDRLGFKWGKDLVHFSYGMVELPNG---KMKSREGTVVDA 414 Query: 409 --------------------TLRHVVDE--------VGSDSVRFMML---WRKN-----S 432 L + +E VG ++++ +L RKN Sbjct: 415 DDLIESMIANAKKLSEDKVNKLEGITEEEKNEIARIVGLGALKYFILKVDARKNMLFNPE 474 Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492 E +DF+ N ++QY YAR RSI R+A+ + P+ ++ +S + Sbjct: 475 ESIDFN---------GNTGPFIQYTYARIRSILRKAEAQHISI-----PK-MLSDKSPLN 519 Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552 E+ L+ L E+ + A + P +A Y Y+L F+ + + A+ Sbjct: 520 EKEIALVQKLNEFGSTVAQAGVDYSPSGIANYCYELTKEFNQFYHD------YSILGADT 573 Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL + + VA II +G++++G+E P M Sbjct: 574 DAEKITRLVIANNVAKIIKNGMSLLGIEVPERM 606 >gi|126310309|ref|XP_001366951.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 578 Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 136/598 (22%), Positives = 243/598 (40%), Gaps = 121/598 (20%) Query: 39 DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98 +C++GH S+P D A + ++K D V + G G +N ++ L Sbjct: 51 ECSNGH---------SKP---DIQVQARRLAEKLKCDTVVSEI-STGPGTVNFKINRELL 97 Query: 99 RK-ILSSIVVSGIEYG-RNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 K +L + GI YG ++ + G KV +EF S N HVGH R ++G+ +A+L Sbjct: 98 TKTVLQQVFEDGINYGLKSELFSGLPQKKVVVEFSSPNVAKKFHVGHLRSTIIGNFIANL 157 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 G++VTR Y D G Q L + Y++ L +N P + VY++ V KE Sbjct: 158 KEALGHQVTRINYFGDWGMQFGLLGTGFQLFGYEEKLQSN----PLQHLFEVYVQ-VNKE 212 Query: 213 LADKYSSE--------LLNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 AD + E L +++ L + +D S++ ++I K L + D + S Sbjct: 213 AADDENVEKSAREFFHQLEAGDKQALSLWQKFRDLSIKEYVQI----YKRLGVHFDEY-S 267 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD-DV 320 + F+R + ++D +G+L K K T D+ K GD + Sbjct: 268 GESFYREKSREVLRLLDK--------KGLLQRTK-KGTAVIDLSGK---------GDPSL 309 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 +++S+G+ Y DLA + + FD+MIYV + +++ + + + A Sbjct: 310 SCTVMRSNGTSLYATRDLAAAIDRMNKYNFDSMIYVTDKGQQNHFQQVFQILKLMGFEWA 369 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD--- 436 E R G+ M R GD L V++E + M + + EL + Sbjct: 370 -------ERCRHIPFGVVQGMKTRRGDVTFLEDVINETRLRMLENMAFSKTSKELENPHE 422 Query: 437 ------------------------FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 F++ +V QS+ + ++QY +AR S+ Sbjct: 423 TAERVGLAALIIQDFKGHLLSDYKFNWDRVF-QSRGDTGVFLQYTHARLSSL-------- 473 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA--- 529 + F+ I D + ++ HL Y V+ ++ +P + YL L+ Sbjct: 474 -EETFECGHLRNINATCLQDPQSISILQHLLRYDEVLFKSSQDLQPRHIVSYLITLSHLT 532 Query: 530 SVFHGHWSHGRENPRLRFVQANNR--KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +V H + +Q R ++ RL L AV S++ +G+ ++G+ + M Sbjct: 533 AVAH------------KTLQIKGRLPEVAEARLHLFKAVRSVLANGMKLLGITPVSRM 578 >gi|116515092|ref|YP_802721.1| hypothetical protein BCc_152 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|122285512|sp|Q057S1|SYR_BUCCC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|116256946|gb|ABJ90628.1| arginyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 571 Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 119/547 (21%), Positives = 231/547 (42%), Gaps = 96/547 (17%) Query: 83 IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL---IGKGTKVNIEFVSANPTGPMHVG 139 I+ GFIN+ L +++ ++++ ++ +N K K+ I++ S N MHVG Sbjct: 77 ISKPGFINITLDSNWICTNINNMFIA-----KNFNISFKKPKKIIIDYSSPNIAKEMHVG 131 Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199 H R ++GDT A ++ F G+ V ++ +I D G Q L + + + Sbjct: 132 HLRSTILGDTTARILKFLGHNVIKQNHIGDWGIQFGMLITQLKLESKISF---------- 181 Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL-----NI 254 K + Y LN+ + PI + + ++K+ + D K + + Sbjct: 182 -----------KNIEKIYKKSYLNYKKN---PIFFKKTKKNVVKLQKKDKKCIYIWKKIV 227 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT----QKCDMDRKQLL 310 + I + + + + S + I + ++ GI+ K K Q C + L Sbjct: 228 KKSIKKNNKVYKKLNVSLKKKDIRGESFYNFMLPGIISDLKKKKIAVNYQGCVIV--YLK 285 Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRLE 368 +G + + K DG++ Y D+A ++CK + D +IY + + ++ ++ Sbjct: 286 NFKNRLGKKMGVVIQKKDGAFLYTTTDIACLKYRCKTLKA-DRIIYYIDNRQKQHLLQIW 344 Query: 369 AVA--AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------- 416 +A A KK + ++ L+++ P K R GD I L ++++ Sbjct: 345 NIAKKAKYFTKKILLEHHSFGMI-LHKNKKPFKT--RNGDTIKLIKLLNKGVTKAKEKIK 401 Query: 417 -----------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAY 458 +G ++++ L +K LD+ F K S E N Y+QYAY Sbjct: 402 KKNRKIKKKELKKIAHNIGIGAIKYFDLSKKRK--LDYIFDWDKMLSLEGNTAPYIQYAY 459 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 R +SI ++ IF + D + N+ F + E QLI + ++ +I P Sbjct: 460 IRIKSIIKKNTTIFQN---DKYKINI------FTSFERQLIFSIFQFEEIIHILEKKGTP 510 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 + + YLYDL+ G +S EN + + A + + + R++L + II L +G Sbjct: 511 HLMCNYLYDLS----GKFSKFYENCSI--LNAKEKHIKISRIKLSILTSKIIKKCLYFLG 564 Query: 579 VESPNEM 585 +++ ++M Sbjct: 565 IKTVSKM 571 >gi|125550952|gb|EAY96661.1| hypothetical protein OsI_18575 [Oryza sativa Indica Group] Length = 606 Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 127/583 (21%), Positives = 232/583 (39%), Gaps = 96/583 (16%) Query: 48 NAAMILSRPLGL-----DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 NA + SR G +P I + I + ++S +AG GF+N+ LS S++ K + Sbjct: 63 NAMGLWSRIKGSGTSFKNPNAIGQAIAKNLPPSDIIESTSVAGPGFVNIVLSNSWVAKRI 122 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 ++V+GI+ ++ V ++F S N MHVGH R ++GDTLA + FS EV Sbjct: 123 QGMLVNGIKTWAPILPVKRAV-LDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSNVEVL 181 Query: 163 REYYINDAGAQINTLALSVFWR---YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 R ++ D G Q L +F + +++ DL Y E D+ Sbjct: 182 RRNHVGDWGTQFGMLIQYLFEKFPNWEEIGSQAIGDLQTFYKASKNRFDGDAEFKDRAQQ 241 Query: 220 EL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277 + L EE++ + + +I R++ + ++ + E +P I ++ Sbjct: 242 AVVRLQGGEERYRA-----AWNKICEISRNEFDMVYKLLNVKLEEKGESFYNPF-IPQVL 295 Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337 + L +G + E + +++F + G + ++K DG + Y + D Sbjct: 296 EELNNKGLIKES---------------EGAKVIF---IEGHQIPLIVVKRDGGFNYASTD 337 Query: 338 LA--YFKCKYERGFDNMIYVMGSDHSGY------VKRLEAVAAAVSEKK-AQINVLLCEL 388 LA +++ E+ + +IYV + R+ EKK + N + L Sbjct: 338 LAALWYRLNVEKA-EWIIYVTDVGQQQHFDMFFNAARMAGWLPDPKEKKYPKTNHVGFGL 396 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS-VRFMMLWRKNSELLDFDFCKVKEQS- 446 V L DG + R+ + + L ++DE S S + +N +++D+ ++++ S Sbjct: 397 V-LGSDGK--RFRTRSTEVVRLIELLDEAKSRSKSELLQRLTENGKIVDWTEEELEKTSE 453 Query: 447 ------------------------------KENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 K N Y+QYA+AR SI R++ +L Sbjct: 454 AVGYGAVKYADLKNNRLTNYTFSFEQMLSDKGNTAVYLQYAHARICSIIRKSNKDVEELK 513 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 P E L ++L + V+E A P L YLY+L+ +F + Sbjct: 514 MSGAISLDHPDER-------VLGLYLIRFAEVVEEACTNLLPNVLCEYLYNLSEMFTRFY 566 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 ++ Q RL L A A ++ ++G+ Sbjct: 567 TN---------CQVVGSPEETSRLLLCQATAVVMRQCFELLGI 600 >gi|225552118|ref|ZP_03773058.1| arginyl-tRNA synthetase [Borrelia sp. SV1] gi|225371116|gb|EEH00546.1| arginyl-tRNA synthetase [Borrelia sp. SV1] Length = 585 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 121/540 (22%), Positives = 219/540 (40%), Gaps = 92/540 (17%) Query: 88 FINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N+ +S Y+ + + YG + K+ +EF S N P+HVGH R V+ Sbjct: 84 YLNIKISRKEYINNTIQMVNAQKDTYGTSKYLDNKKIILEFSSPNTNKPLHVGHLRNDVI 143 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRY---QQALYNNDSDLPEGYY 201 G++L+ ++ G ++T+ IND G I + LA F ++A D + + Y Sbjct: 144 GESLSRILKAVGAKITKINLINDRGVHICKSMLAYKKFGNGITPEKAFKKGDHLIGDFYV 203 Query: 202 PGVYLKHVGK-ELADKYSSELLNFPEEK-------WLPIVKDYSVQAMMKIIRDDLKALN 253 Y K+ + E A+K +LL E+K W + K ++++ I++ + N Sbjct: 204 K--YNKYSQENENAEKEIQDLLLLWEQKDASTIELWKKLNK-WAIEG----IKETYEITN 256 Query: 254 IQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPPPKSKTTQKCDMDRKQ 308 D I++ + F G ++++ +G+ Y+ I S + + D KQ Sbjct: 257 TSFDKIYLESEIFEIG-----KNVVLEGLEKGFCYKREDGAICIDLPSDSDENADTKVKQ 311 Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRL 367 + L++S+G+ Y DL + E F+ MIYV+GS+ + K L Sbjct: 312 -------------KVLIRSNGTSIYLTQDLGNIAVRTKEFNFEEMIYVVGSEQIQHFKSL 358 Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 VA + K + + L + DG KM R G+ I +++ + + M Sbjct: 359 FFVAEKLGLSKNKKLIHLSHGMVNLLDG---KMKSREGNVIDADNLISNLIESIMPEMTQ 415 Query: 428 WRKNSE----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRS 463 +N E L + +K ++ VF Y+QY AR S Sbjct: 416 KIENKESAKKNALNIALGAIHYYLLKSAIHKDIVFNKKESLSFTGNSGPYIQYVGARINS 475 Query: 464 IFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 I + K + +DF+L E ++I ++E I NA P Sbjct: 476 ILEKYKALSIPVMEKIDFELLKH----------EKEWEIIKIISELGENIINAAKDLNPS 525 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 L Y Y LA F ++ ++ + NN LT R++ + A+ I + + ++ + Sbjct: 526 ILTSYSYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEFLKAILQTIKNCMYLLNI 579 >gi|60683639|ref|YP_213783.1| arginyl-tRNA synthetase [Bacteroides fragilis NCTC 9343] gi|81313314|sp|Q5L7Q8|SYR_BACFN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|60495073|emb|CAH09892.1| putative arginyl-tRNA synthetase [Bacteroides fragilis NCTC 9343] Length = 597 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 128/582 (21%), Positives = 240/582 (41%), Gaps = 97/582 (16%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P A+ I +K + + F KGF+NL ++ + ++L+ I +YG + Sbjct: 56 PEQTAQEIGEYLKANEPAVAAFNVIKGFLNLTVASATWIELLNEIHTDA-QYGIVSADEN 114 Query: 121 TK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 V IE+ S N P+H+GH R ++G+ LA+++ +G +V + +ND G I L Sbjct: 115 APLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVMANGNKVVKTNIVNDRGIHICKSML 174 Query: 180 SVFWRYQQALYNNDS----DLPEGYYPGVYLKHVGKELAD-----------KYSSELLNF 224 + + +Y + S D G Y + KH E+A+ + +S L+N Sbjct: 175 A-WQKYGKGETPESSGKKGDHLVGDYYVAFDKHYKAEVAELMEKGMSKEEAEAASPLMNE 233 Query: 225 PEE---KWLPIVKDYSVQAMMKIIR--------DDLKALNIQHD-IFISEDDFHRGDPSP 272 E KW D V+A+ +++ + + + + D I+ + + G Sbjct: 234 AREMLVKWE--AGDPEVRALWQMMNNWVYAGFDETYRKMGVGFDKIYYESNTYLEGKEKV 291 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + + +G+ ++ K + D+ T G D + LL+ DG+ Sbjct: 292 MEGL-----EKGFFFK------KEDGSVWADL---------TAEGLD-HKLLLRGDGTSV 330 Query: 333 YFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV--AAAVSEKKAQIN-----VL 384 Y D+ K ++ + D MIYV+G++ + + + L + K+ ++ V Sbjct: 331 YMTQDIGTAKLRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKSLVHFSYGMVE 390 Query: 385 LCELVRLYRDGMPIKMSKRAGDFI-TLRHVVDEVGS----------DSVRFMMLWRKNSE 433 L E R+G + + I T + E+G D R + L Sbjct: 391 LPEGKMKSREGTVVDADDLMAEMIATAKETSQELGKLDGLTQEEADDIARIVGLGALKYF 450 Query: 434 LLDFDFCK-VKEQSKENPVF------YVQYAYARCRSIFRQAKD---IFPDLDFDLFPRN 483 +L D K + KE+ F ++QY YAR RS+ R+A + + P+ Sbjct: 451 ILKVDARKNMTFNPKESIDFNGNTGPFIQYTYARIRSVLRKAAEAGIVIPE--------- 501 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 V+P E E LI +A++ V+ A P +A Y+YDL ++ + Sbjct: 502 VLPANIELSEKEEGLIQMVADFAAVVRQAGEDYSPSGIANYVYDLVKEYNQFYHD----- 556 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ N + + R+ L +A ++ G+ ++G+E P+ M Sbjct: 557 -FSILREENEDVKLFRIALSANIAKVVRLGMGLLGIEVPDRM 597 >gi|189191868|ref|XP_001932273.1| arginyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187973879|gb|EDU41378.1| arginyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 646 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 134/564 (23%), Positives = 217/564 (38%), Gaps = 94/564 (16%) Query: 89 INLYLSPSYLRKILSSIVV-SGIEYGRNL---------IGKGTKVNI-EFVSANPTGPMH 137 I + P L ++ +V+ S +YG N G K I EF S N P H Sbjct: 107 IGFFFKPETLTSLVVPMVIKSKDDYGFNKNFGLKNPVDPSSGAKTMIVEFSSPNIAKPFH 166 Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL- 196 GH R ++G LA++ +G++V R Y+ D G Q LA+ LY N+ +L Sbjct: 167 AGHLRSTIIGGFLANIYERAGWDVVRMNYLGDWGKQYGVLAIGF------DLYGNEEELV 220 Query: 197 --PEGYYPGVYLK-----HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249 P G+ +Y+K H E E EE KD S Q KI + + Sbjct: 221 KNPIGHLYDIYVKVSNVQHQEAEEMKALKEEAAKLKEEG-----KDASEQEN-KIKKIEA 274 Query: 250 KALNIQHDIFISEDDFHRGDPSPI------RDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 + ++ Q + G+P + RD+ +Q Y I S +Q D Sbjct: 275 EGIDEQARKYFK--GMVDGEPKALGIWKRFRDLSIEKYKQTYARLNIHYDDYSGESQVKD 332 Query: 304 --MDRKQLLFRSTMVGDDVDRPLL----------------KSDGSYTYFAADLAYFKCKY 345 M+ + V D + ++ K DG+ Y D+ + Sbjct: 333 ESMELAAKIMWEKGVCQDSEGAVIVDLTPHSKKLGKAVIKKKDGTSLYLTRDIGAAIERV 392 Query: 346 ER-GFDNMIYVMGSDHSGYVKRLEAVAAA-----VSEKKAQINV--------------LL 385 E+ FD MIYV+ S ++ +L + +SEK IN L Sbjct: 393 EKYHFDKMIYVVASQQDLHLAQLFKIEELMGRKDISEKCQHINFGMVLGMSTRKGTAKFL 452 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLR---HVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 +++R D M M + +R D +G +V + K FD ++ Sbjct: 453 DDILRDVGDKMHEVMRTNETKYAQVRDPEKTADTLGISAVMVQDMKGKRINNYTFDMDRM 512 Query: 443 KE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVIPQESEFDTSELQLIV 500 + P Y+QYA+AR SI+R+A D L+ DL + E ++L+ Sbjct: 513 TSFEGDTGP--YLQYAHARLCSIYRKAVDADRSLEEIDLASAADLSLLKE--DKAVELVR 568 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 LA +P N QEP + YL+ +A + H + V + + + + RL Sbjct: 569 QLASWPDTFVNTLKTQEPTTVLTYLFKMAHALSSSYDHLQ-------VVGSEKNVLVARL 621 Query: 561 QLVHAVASIINSGLNIIGVESPNE 584 L A ++ +G+ ++G+ SP E Sbjct: 622 ALYVAARQVLYNGMKVLGL-SPVE 644 >gi|53715701|ref|YP_101693.1| arginyl-tRNA synthetase [Bacteroides fragilis YCH46] gi|265767354|ref|ZP_06095020.1| arginyl-tRNA synthetase [Bacteroides sp. 2_1_16] gi|81380963|sp|Q64MX8|SYR_BACFR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|52218566|dbj|BAD51159.1| arginyl-tRNA synthetase [Bacteroides fragilis YCH46] gi|263252659|gb|EEZ24171.1| arginyl-tRNA synthetase [Bacteroides sp. 2_1_16] Length = 597 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 128/582 (21%), Positives = 240/582 (41%), Gaps = 97/582 (16%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P A+ I +K + + F KGF+NL ++ + ++L+ I +YG + Sbjct: 56 PEQTAQEIGEYLKANEPAVAAFNVIKGFLNLTVASATWIELLNEIHADA-QYGIVSADEN 114 Query: 121 TK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 V IE+ S N P+H+GH R ++G+ LA+++ +G +V + +ND G I L Sbjct: 115 APLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVMANGNKVVKTNIVNDRGIHICKSML 174 Query: 180 SVFWRYQQALYNNDS----DLPEGYYPGVYLKHVGKELAD-----------KYSSELLNF 224 + + +Y + S D G Y + KH E+A+ + +S L+N Sbjct: 175 A-WQKYGKGETPESSGKKGDHLVGDYYVAFDKHYKAEVAELMEKGMSKEEAEAASPLMNE 233 Query: 225 PEE---KWLPIVKDYSVQAMMKIIR--------DDLKALNIQHD-IFISEDDFHRGDPSP 272 E KW D V+A+ +++ + + + + D I+ + + G Sbjct: 234 AREMLVKWE--AGDPEVRALWQMMNNWVYTGFDETYRKMGVGFDKIYYESNTYLEGKEKV 291 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + + +G+ ++ K + D+ T G D + LL+ DG+ Sbjct: 292 MEGL-----EKGFFFK------KEDGSVWADL---------TAEGLD-HKLLLRGDGTSV 330 Query: 333 YFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV--AAAVSEKKAQIN-----VL 384 Y D+ K ++ + D MIYV+G++ + + + L + K+ ++ V Sbjct: 331 YMTQDIGTAKLRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKSLVHFSYGMVE 390 Query: 385 LCELVRLYRDGMPIKMSKRAGDFI-TLRHVVDEVGS----------DSVRFMMLWRKNSE 433 L E R+G + + I T + E+G D R + L Sbjct: 391 LPEGKMKSREGTVVDADDLMAEMIATAKETSQELGKLDGLTQEEADDIARIVGLGALKYF 450 Query: 434 LLDFDFCK-VKEQSKENPVF------YVQYAYARCRSIFRQAKD---IFPDLDFDLFPRN 483 +L D K + KE+ F ++QY YAR RS+ R+A + + P+ Sbjct: 451 ILKVDARKNMTFNPKESIDFNGNTGPFIQYTYARIRSVLRKAAEAGIVIPE--------- 501 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 V+P E E LI +A++ V+ A P +A Y+YDL ++ + Sbjct: 502 VLPANIELSEKEEGLIQMVADFAAVVRQAGEDYSPSGIANYVYDLVKEYNQFYHD----- 556 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ N + + R+ L +A ++ G+ ++G+E P+ M Sbjct: 557 -FSILREENEDVKLFRIALSANIAKVVRLGMGLLGIEVPDRM 597 >gi|86141177|ref|ZP_01059723.1| arginyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217] gi|85831736|gb|EAQ50191.1| arginyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217] Length = 609 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 149/636 (23%), Positives = 248/636 (38%), Gaps = 102/636 (16%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 + S +L N +K D ++ L+ + ++ R G L+ IL G +P I Sbjct: 20 NLSEKLTNAVK--DAVQELFSASLETVEVQPTRKDFEGDLTVVVFPILRVAKG-NPAVIG 76 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 E I +K + D S F KGF+NL ++ +Y I + +G G V + Sbjct: 77 EQIGTYVKENLDEISDFNVVKGFLNLVIADAYYLNFFDGIR-DQMNFGHEPEA-GKAVMV 134 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFW 183 E+ S N P+H+GH R ++G ++A ++ SG +V + IND G I + LA F Sbjct: 135 EYSSPNTNKPLHLGHIRNNLLGYSVAEILKASGKKVYKTQIINDRGIHICKSMLAWQKFG 194 Query: 184 RYQ--QALYNNDSDLPEGYY---------PGVYLKHVG--KELADKYSSELLNFPE--EK 228 + ++ L YY YL G KE A+K + +L + K Sbjct: 195 EGETPESTGLKGDKLVGNYYVKFDKAYKEEQSYLVAQGKTKEEAEKEAPLILEAQDMLRK 254 Query: 229 WLPIVKDYSVQAMMKII--------RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNL 280 W D V A+ + + + K L + D + E + + +D I+ Sbjct: 255 WE--AGDEEVVALWEKMNGWVYEGFEETYKNLGVDFDSYYYESNTYLLG----KDNIEEG 308 Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL-LKSDGSYTYFAADL- 338 ++G Y+ K + CD+ D +D L L+SDG+ Y D+ Sbjct: 309 LKKGVFYK------KGDGSVWCDLTE-----------DGLDEKLVLRSDGTAVYMTQDIG 351 Query: 339 -AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397 A + K MIY +G++ + K L + + A+ L L D Sbjct: 352 TAIQRVKDHPDVGGMIYTVGNEQDYHFKVLFLILKKLGYDWAE---HLFHLSYGMVDLPS 408 Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK--------NSEL--------LDFDFCK 441 KM R G + +V+E+ + + K EL L + K Sbjct: 409 GKMKSREGTVVDADDLVEEMATTAGNIAQELGKLDGYSEAEKQELYKIIGLGALKYYILK 468 Query: 442 VK---------EQS---KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489 V E+S + N ++QY YAR +SI R+A + D+ + P+E Sbjct: 469 VDPKKRILFNPEESVDFQGNTGPFIQYTYARIQSILRKAAETGVAEDYAY--EALQPKEK 526 Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549 E LI LA YP ++ A P +A Y YDL F+ + ++ + Sbjct: 527 E-------LIKQLALYPETVQLAAENHSPALIANYTYDLVKEFNSFYQ------QVSILG 573 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A+ R+ L V +I + ++G++ P M Sbjct: 574 ADTDAEKSFRVALSKKVGEVIEAAFGLLGIQVPERM 609 >gi|197303752|ref|ZP_03168789.1| hypothetical protein RUMLAC_02482 [Ruminococcus lactaris ATCC 29176] gi|197297272|gb|EDY31835.1| hypothetical protein RUMLAC_02482 [Ruminococcus lactaris ATCC 29176] Length = 591 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 120/603 (19%), Positives = 240/603 (39%), Gaps = 85/603 (14%) Query: 29 LDRIVIE-RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87 L R+ + RP C + N AM ++ P+ IAE +VA + G Sbjct: 28 LARVTLSNRPDLCEY---QCNGAMAGAKKYKKAPIMIAEDVVANLAESQCFAQAEAVKPG 84 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FINL L P ++ + L+ + G + V I++ N P+HVGH R A++G Sbjct: 85 FINLKLKPEFVAEYLNEMAADE-NLGVEKEAEPKTVMIDYGGPNVAKPLHVGHLRSAIIG 143 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS---DLPEGYYPGV 204 +++ ++ + G +VT + ++ D G Q+ + + R Y ++S + PE + Sbjct: 144 ESIKRIIRYKGNKVTGDIHLGDWGYQMGLIITELKKRQPDLPYFDESFGGEYPEEAPFTI 203 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPI------VKDYSV--QAMMKIIRDDLKA----L 252 A Y+ E ++ EE K Y + +M + DLK L Sbjct: 204 SELEEIYPTASAYAKEHEDYREEALHATYLLQNGYKGYRAIWKHIMNVSVTDLKKNYERL 263 Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312 N++ D++ E D + P +++ L +G+ + D+ L+ Sbjct: 264 NVEFDLWKGEADAQKYIPG----MVEMLKEKGFAH----------------YDQGALVVD 303 Query: 313 STMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLE 368 D+ + P +LKSDG+ Y DLA + E D +IYV+ + ++ Sbjct: 304 VAEETDNKEVPPCMILKSDGAALYDTTDLATLVEREELYQPDEVIYVVDKRQELHFIQVF 363 Query: 369 AVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 A + + + + +DG P K R G + L +++ E+ + + +M Sbjct: 364 RCAKKTGIVRPETELKFLGFGTMNGKDGKPFKT--REGGVMRLENLIREIDEEMYKKIMD 421 Query: 428 WRKNSE-----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCR 462 R E L + + Q+ ++ +F Y+ Y R + Sbjct: 422 NRTVEEADARKTAAEVGLAAIKYGDLSNQASKDYIFDVDRFTSFEGNTGPYILYTIVRIK 481 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 SI ++ + + + ++ E + +E L++ + ++ VI+ P+KL Sbjct: 482 SILKK----YAENGGNAEGAKILAAE---NAAEKALMLQVLKFNEVIDTVYAETAPHKLC 534 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 Y+YDLA+ F+ + + + + + L++ ++ + ++++G +P Sbjct: 535 AYIYDLANEFNKFYHE------TKILSEEDEAKKSGYIALLNLAKKVLETCIDLLGFTAP 588 Query: 583 NEM 585 M Sbjct: 589 ERM 591 >gi|194745067|ref|XP_001955014.1| GF16459 [Drosophila ananassae] gi|190628051|gb|EDV43575.1| GF16459 [Drosophila ananassae] Length = 666 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 136/610 (22%), Positives = 244/610 (40%), Gaps = 137/610 (22%) Query: 43 GHLSTNAAMILSRPL---GLD--PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N AM L++ L G++ P IA I + P ++ + +AG GF+N++LS +Y Sbjct: 117 GDYQCNNAMKLAKQLKEKGINKSPGDIATEIQRNCPVSPLIEKLEVAGAGFVNVFLSKNY 176 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + LS ++ +G+ + +V I+F S N MHVGH R ++G+++ L+ F Sbjct: 177 ASQALSGLLRNGV---KPPPVPKRRVLIDFSSPNIAKQMHVGHLRSTIIGESICRLLEFL 233 Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198 ++V R ++ D G Q L L VF++ + ++ D + + Sbjct: 234 QHDVVRINHLGDWGTQFGMLIAHLEDRFPNFLNESPPIGDLQVFYKESKKRFDEDEEFKK 293 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y V G+ + K W Q + + R + + + + D+ Sbjct: 294 RAYSRVVSLQSGEPNSIK-----------AW---------QLICDVSRKEFQTIYNRLDV 333 Query: 259 FISEDDFHRGDP---SPIRDIIDNLARQGYVY--EG--ILPPPKSKTTQKCDMDRKQLLF 311 I E RG+ S + +++ L ++ + EG I+ P +SKT Sbjct: 334 SIQE----RGESFYQSRMLSVVEFLRKKNLLEPDEGREIMWPDESKT------------- 376 Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV 370 + ++KSDG +TY +D+A + + E +IYV+ + S + + Sbjct: 377 -------GIPLTIVKSDGGFTYDTSDMAAIRHRLEEEKCSWIIYVVDAGQSTHFNTIFKA 429 Query: 371 A--------AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 A A Q V+L E DG K R+GD + L ++DE S+ Sbjct: 430 AERCGILDRAVHRVDHVQFGVVLGE------DGKKFKT--RSGDTVKLSDLLDEGMKRSL 481 Query: 423 RFMMLWRKN-----SELLD------------------------FDFCKVKEQSKENPVFY 453 + +N EL D F F K+ E + N Y Sbjct: 482 NQLESRGRNDVLTPQELKDAQEAVAYSCIKYADLCHNRISDYIFSFDKMLE-DRGNTAVY 540 Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNV-IPQESEFDTSELQLIVHLAEYPRVIENA 512 + Y Y R SI R + + F DL L N+ + E E+ ++ L +H ++ Sbjct: 541 LLYTYTRICSIARNSGEDFSDLAKVLEGVNIDLSHEKEWKLAKTLLKMH-----DILIKC 595 Query: 513 TIAQEPYKLAFYLYDLASVFHGHW--SHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 + + L + Y++ +VF + + E + + A NR R+ L A A+++ Sbjct: 596 SNELFLHFLCEFCYEVCTVFTEFYDSCYCIEKNKAGEIIAVNRS----RILLCEATAAVL 651 Query: 571 NSGLNIIGVE 580 I+G++ Sbjct: 652 RQSFFILGLK 661 >gi|115462265|ref|NP_001054732.1| Os05g0163000 [Oryza sativa Japonica Group] gi|46981337|gb|AAT07655.1| putative Arginyl-tRNA synthetase [Oryza sativa Japonica Group] gi|113578283|dbj|BAF16646.1| Os05g0163000 [Oryza sativa Japonica Group] gi|222630303|gb|EEE62435.1| hypothetical protein OsJ_17227 [Oryza sativa Japonica Group] Length = 606 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 127/583 (21%), Positives = 232/583 (39%), Gaps = 96/583 (16%) Query: 48 NAAMILSRPLGL-----DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 NA + SR G +P I + I + ++S +AG GF+N+ LS S++ K + Sbjct: 63 NAMGLWSRIKGSGTSFKNPNAIGQAIAKNLPPSDIIESTSVAGPGFVNIVLSNSWVAKRI 122 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 ++V+GI+ ++ V ++F S N MHVGH R ++GDTLA + FS EV Sbjct: 123 QDMLVNGIKTWAPILPVKRAV-LDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSNVEVL 181 Query: 163 REYYINDAGAQINTLALSVFWR---YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 R ++ D G Q L +F + +++ DL Y E D+ Sbjct: 182 RRNHVGDWGTQFGMLIQYLFEKFPNWEEIGSQAIGDLQTFYKASKNRFDGDAEFKDRAQQ 241 Query: 220 EL--LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277 + L EE++ + + +I R++ + ++ + E +P I ++ Sbjct: 242 AVVRLQGGEERYRA-----AWNKICEISRNEFDMVYKLLNVKLEEKGESFYNPF-IPQVL 295 Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337 + L +G + E + +++F + G + ++K DG + Y + D Sbjct: 296 EELNNKGLIKES---------------EGAKVIF---IEGHQIPLIVVKRDGGFNYASTD 337 Query: 338 LA--YFKCKYERGFDNMIYVMGSDHSGY------VKRLEAVAAAVSEKK-AQINVLLCEL 388 LA +++ E+ + +IYV + R+ EKK + N + L Sbjct: 338 LAALWYRLNVEKA-EWIIYVTDVGQQQHFDMFFNAARMAGWLPDPKEKKYPKTNHVGFGL 396 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS-VRFMMLWRKNSELLDFDFCKVKEQS- 446 V L DG + R+ + + L ++DE S S + +N +++D+ ++++ S Sbjct: 397 V-LGSDGK--RFRTRSTEVVRLIELLDEAKSRSKSELLQRLTENGKIVDWTEEELEKTSE 453 Query: 447 ------------------------------KENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 K N Y+QYA+AR SI R++ +L Sbjct: 454 AVGYGAVKYADLKNNRLTNYTFSFEQMLSDKGNTAVYLQYAHARICSIIRKSNKDVEELK 513 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 P E L ++L + V+E A P L YLY+L+ +F + Sbjct: 514 MSGAISLDHPDER-------VLGLYLIRFAEVVEEACTNLLPNVLCEYLYNLSEMFTRFY 566 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 ++ Q RL L A A ++ ++G+ Sbjct: 567 TN---------CQVVGSPEETSRLLLCQATAVVMRQCFELLGI 600 >gi|253566485|ref|ZP_04843938.1| arginyl-tRNA synthetase [Bacteroides sp. 3_2_5] gi|251944657|gb|EES85132.1| arginyl-tRNA synthetase [Bacteroides sp. 3_2_5] gi|301165151|emb|CBW24721.1| putative arginyl-tRNA synthetase [Bacteroides fragilis 638R] Length = 597 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 129/582 (22%), Positives = 241/582 (41%), Gaps = 97/582 (16%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P A+ I +K + + F KGF+NL ++ + ++L+ I +YG + Sbjct: 56 PEQTAQEIGEYLKANEPAVAAFNVIKGFLNLTVASATWIELLNEIHADA-QYGIVSADEN 114 Query: 121 TK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 V IE+ S N P+H+GH R ++G+ LA+++ +G +V + +ND G I L Sbjct: 115 APLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVMANGNKVVKTNIVNDRGIHICKSML 174 Query: 180 SVFWRYQQALYNNDS----DLPEGYYPGVYLKHVGKELAD-----------KYSSELLNF 224 + + +Y + S D G Y + KH E+A+ + +S L+N Sbjct: 175 A-WQKYGKGETPESSGKKGDHLVGDYYVAFDKHYKAEVAELMEKGMSKEEAEAASPLMNE 233 Query: 225 PEE---KWLPIVKDYSVQAMMKIIRDDLKA--------LNIQHD-IFISEDDFHRGDPSP 272 E KW D V+A+ +++ + + A + + D I+ + + G Sbjct: 234 AREMLVKWE--AGDPEVRALWQMMNNWVYAGFDETYRKMGVGFDKIYYESNTYLEGKEKV 291 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + + +G+ ++ K + D+ T G D + LL+ DG+ Sbjct: 292 MEGL-----EKGFFFK------KEDGSVWADL---------TAEGLD-HKLLLRGDGTSV 330 Query: 333 YFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV--AAAVSEKKAQIN-----VL 384 Y D+ K ++ + D MIYV+G++ + + + L + K+ ++ V Sbjct: 331 YMTQDIGTAKLRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKSLVHFSYGMVE 390 Query: 385 LCELVRLYRDGMPIKMSKRAGDFI-TLRHVVDEVGS----------DSVRFMMLWRKNSE 433 L E R+G + + I T + E+G D R + L Sbjct: 391 LPEGKMKSREGTVVDADDLMAEMIATAKETSQELGKLDGLTQEEADDIARIVGLGALKYF 450 Query: 434 LLDFDFCK-VKEQSKENPVF------YVQYAYARCRSIFRQAKD---IFPDLDFDLFPRN 483 +L D K + KE+ F ++QY YAR RS+ R+A + + P+ Sbjct: 451 ILKVDARKNMTFNPKESIDFNGNTGPFIQYTYARIRSVLRKAAEAGIVIPE--------- 501 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 V+P E E LI +A++ V+ A P +A Y+YDL ++ + Sbjct: 502 VLPANIELSEKEEGLIQMVADFAAVVRQAGEDYSPSGIANYVYDLVKEYNQFYHD----- 556 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ N + + R+ L +A ++ G+ ++G+E P+ M Sbjct: 557 -FSILREENEDVKLFRIALSANIAKVVRLGMGLLGIEVPDRM 597 >gi|297831814|ref|XP_002883789.1| hypothetical protein ARALYDRAFT_480296 [Arabidopsis lyrata subsp. lyrata] gi|297329629|gb|EFH60048.1| hypothetical protein ARALYDRAFT_480296 [Arabidopsis lyrata subsp. lyrata] Length = 590 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 122/568 (21%), Positives = 230/568 (40%), Gaps = 102/568 (17%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P + + ++ + V+S IAG GF+N+ LS ++ K + ++++ GI+ + Sbjct: 70 PPAVGQALIKSLPTSEMVESCSIAGPGFVNVVLSAKWMAKSIENMLIDGIDTWAPTLSVK 129 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 V ++F S N MHVGH R ++GDTLA ++ +S EV R ++ D G Q L Sbjct: 130 RAV-VDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSKVEVLRRNHVGDWGTQFGMLIEF 188 Query: 181 VFWRYQQALYNNDSDLP--EGYYPGVYLKH-VGKELADKYSSELLNFPEEKWLPIVKDYS 237 +F ++ ++ + + +Y LK + E +K ++ + P+ + + Sbjct: 189 LFEKFPDTDSVTETAIGDLQMFYKKSKLKFDLDPEFKEKAQQAVVRL--QGGDPVYRK-A 245 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 + +I R++ + + + + E +P I ++I+ L+ +G V E SK Sbjct: 246 WAKICEISRNEFAKVYQRLRVELEEKGESFYNPY-IANVIEELSSKGLVEE-------SK 297 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA------------------ 339 + ++ F++ ++ ++KSDG + Y + DL Sbjct: 298 GARVIFIEG----FKAPLI-------VVKSDGGFNYASTDLTALWYRLNEEKAEWIIYLT 346 Query: 340 ----------YFKCKYERGF---DNMIY----------VMGSDHSGYVKRLEAVAAAVSE 376 +FK + G+ D+ Y V+G D+ + R V Sbjct: 347 DFGQQQHFHMFFKAARKAGWLPDDDKTYPRVNHVGFGLVLGDDNKRFRTRSTEV------ 400 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDF----ITLRHVVDEVGSDSVRFMMLWRKNS 432 V L +L+ +D + +R D L + VG ++++ L K + Sbjct: 401 ------VRLVDLLDEAKDRSKAALIERGKDKEWTPEELDQTAESVGYGALKYADL--KTN 452 Query: 433 ELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491 L + F + K + Y+ YA+AR SI R++ D+D +L I + Sbjct: 453 RLTGYTFSFDQMLNDKGDTAVYLLYAHARICSIIRKSGK---DID-ELKKTGKIALDH-- 506 Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551 +E L +HL ++ +E A P L YLY L+ F +S Q N Sbjct: 507 -AAERALGLHLLQFAETVEEACTTLLPNVLCKYLYYLSEEFTKFYSS---------CQVN 556 Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGV 579 RL L A A ++ +++G+ Sbjct: 557 GSAEETSRLLLCEATAIVMRKCFHLLGI 584 >gi|329850270|ref|ZP_08265115.1| arginyl-tRNA synthetase [Asticcacaulis biprosthecum C19] gi|328840585|gb|EGF90156.1| arginyl-tRNA synthetase [Asticcacaulis biprosthecum C19] Length = 608 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 131/577 (22%), Positives = 234/577 (40%), Gaps = 80/577 (13%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A I R+ D + S+ IAG GF+N L+ + L + + + G ++ Sbjct: 61 NPREVATRIQVRLNDDERLQSLEIAGPGFLNFKLNDAAL-SMRGNAIAGDARLGAPVVAA 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 KV I+F N MH+GH R AV+G++L +M F G +VT + + D G Q+ L + Sbjct: 120 KRKVIIDFGGPNVAKEMHIGHLRTAVIGESLKRIMRFLGDDVTGDAHFGDWGLQMGQLIV 179 Query: 180 SVFWRYQQALYNNDS---DLPEG----------YYPGVYLKHVGKEL----ADKYSSELL 222 V Y +++ PE YP + GK+L A + ++ L Sbjct: 180 GVSEEMPDLPYFDEAFSGPYPEASPVTLADLGRIYPKTSQRIKGKDLDFLNAARKATREL 239 Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282 + + + + V + + R D L ++ D++ E D DP + +I +L Sbjct: 240 QQGRPGYRALWQHFVVVSREALKR-DYALLGVEFDLWNGESD---ADPY-VEPMIADLEA 294 Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAY 340 +G + + + + RK+ L ++V PLL S+GS Y D+A Sbjct: 295 KGLLVDD--QGARVVHVARPGETRKKKLEDGSVVEVPSPPPLLAVSSEGSAMYGTTDVAT 352 Query: 341 -FKCKYERGFDNMIYVMG---SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396 + K E D +YV+ ++H V R +A E Q+ V DG Sbjct: 353 ILQRKTEIQPDLYLYVVDQRQAEHFEQVFRTAYLAGYAVE--GQLEHAANGTVN-GPDGT 409 Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL--LDFD------------FCKV 442 P K R G + L +V E +V + + +L +F+ F ++ Sbjct: 410 PFKT--RDGGTLKLHELVSEAVEKAVARLHEQKLGEDLSVAEFNATAHKVAVAALKFAEL 467 Query: 443 KEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488 N +F Y+ Y R +SI R+A + L P ++ E Sbjct: 468 SNHRLTNYIFDLDRFMTFEGKTGPYLLYQAVRMKSILRKAGEQ------GLVPGAIVVGE 521 Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548 +E +L++ L + + + + P LA ++Y LA F ++ + Sbjct: 522 Q----AERELVLLLDGFDGALRETYLKRAPNILADHVYRLAQAFSKFYAA------CPVL 571 Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + + RL LV V + GL+++G+ +P +M Sbjct: 572 VGDDEAVKISRLGLVQVVLKQLELGLDLMGLSAPGQM 608 >gi|312148451|gb|ADQ31110.1| arginyl-tRNA synthetase [Borrelia burgdorferi JD1] Length = 585 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 120/535 (22%), Positives = 217/535 (40%), Gaps = 82/535 (15%) Query: 88 FINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N+ +S Y+ + + YG + K+ +EF S N P+HVGH R V+ Sbjct: 84 YLNIKISRKEYINNTIQMVNAQKDTYGTSKYLDNKKIILEFSSPNTNKPLHVGHLRNDVI 143 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRY---QQALYNNDSDLPEGYY 201 G++L+ ++ G ++T+ IND G I + LA F ++A D + + Y Sbjct: 144 GESLSRILKAVGAKITKINLINDRGVHICKSMLAYKKFGNGITPEKAFKKGDHLIGDFYV 203 Query: 202 PGVYLKHVGK-ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI--IRDDLKALNIQHD- 257 Y K+ + E A+K +LL E+K + ++ + I I++ + N D Sbjct: 204 K--YNKYSQENENAEKEIQDLLLLWEQKDVSTIELWKKLNKWAIEGIKETYEITNTSFDK 261 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPPPKSKTTQKCDMDRKQLLFRS 313 I++ + F G ++++ +G+ Y+ I S + +K D KQ Sbjct: 262 IYLESEIFEIG-----KNVVLEGLEKGFCYKREDGAICIDLPSDSDKKADTKVKQ----- 311 Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAA 372 + L++S+G+ Y DL + E F+ MIYV+GS+ + K L VA Sbjct: 312 --------KVLIRSNGTSIYLTQDLGNIAVRTKEFNFEEMIYVVGSEQIQHFKSLFFVAE 363 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 + K + + L + DG KM R G+ I +++ + + M +N Sbjct: 364 KLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNVIDADNLISNLIELIIPEMTQKIENK 420 Query: 433 E----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQA 468 E L + +K ++ VF Y+QY AR SI + Sbjct: 421 ESAKKNALNIALGAIHYYLLKSAIHKDIVFNKKESLSFTGNSGPYIQYVGARINSILEKY 480 Query: 469 KD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 K + +DF+L E ++I ++E NA P L Y Sbjct: 481 KALSIPVMEKIDFELLKH----------EKEWEIIKIISELEENTINAAKDLNPSILTSY 530 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 Y LA F ++ ++ + NN LT R++ + A+ I + + ++ + Sbjct: 531 SYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEFLKAILQTIKNCMYLLNI 579 >gi|297841275|ref|XP_002888519.1| hypothetical protein ARALYDRAFT_475759 [Arabidopsis lyrata subsp. lyrata] gi|297334360|gb|EFH64778.1| hypothetical protein ARALYDRAFT_475759 [Arabidopsis lyrata subsp. lyrata] Length = 590 Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 130/581 (22%), Positives = 228/581 (39%), Gaps = 128/581 (22%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P + + ++ + V+S IAG GF+N+ LS ++ K + +++V GI+ + Sbjct: 70 PPAVGQALIKNLPSSEMVESCSIAGPGFVNVVLSAKWIAKSIENMLVDGIDTWAPTLSVK 129 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 V ++F S N MHVGH R ++GDTLA ++ +S EV R ++ D G Q L Sbjct: 130 RAV-VDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSKVEVLRRNHVGDWGTQFGMLIEF 188 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 +F ++ D+D V +G +L Y L F + P K+ + QA Sbjct: 189 LFEKFP------DTD-------SVTETAIG-DLQMFYKKSKLRFDLD---PEFKEKAQQA 231 Query: 241 MMKIIRDDLKALNIQHDIF-ISEDDF------------HRGDP--SP-IRDIIDNLARQG 284 ++++ D I IS ++F +G+ +P I ++I+ L+ +G Sbjct: 232 VVRLQGGDPVYRKAWAKICEISRNEFAKVYQRLRVELEEKGESFYNPYIANVIEELSSKG 291 Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA----- 339 V E + +++F + G ++ ++KS+G + Y + DL Sbjct: 292 LVEEN---------------EGARVIF---VEGFNIPLMVVKSNGGFNYASTDLTALWYR 333 Query: 340 -----------------------YFKCKYERGF---DNMIY----------VMGSDHSGY 363 +FK + G+ D+ Y V+G+D+ + Sbjct: 334 LNEEKAEWIIYLTDLGQQQHFHMFFKAARKAGWLPDDDKTYPRVNHVGFGLVLGADNKRF 393 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF----ITLRHVVDEVGS 419 R V V L +L+ +D + +R D L + VG Sbjct: 394 RTRANEV------------VRLVDLLDEAKDRSKAALIERGKDKEWTPEELDQTAEAVGY 441 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 +++F L F F ++ + V Y+ YA+AR SI R++ D D Sbjct: 442 GALKFADLKTNRLTGYTFSFDQMLNDKGDTAV-YLLYAHARICSIIRKSGK-----DIDE 495 Query: 480 FPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 R + D +E L +HL ++ +E A P L YLY L+ F +S+ Sbjct: 496 LKRT---GKIALDHAAERALGLHLLQFAETVEEACTTLLPNVLCKYLYYLSEEFTKFYSN 552 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 Q N RL L A A ++ ++G+ Sbjct: 553 ---------CQVNGSAEETSRLLLCEATAIVMRKCFYLLGI 584 >gi|16127589|ref|NP_422153.1| arginyl-tRNA synthetase [Caulobacter crescentus CB15] gi|221236405|ref|YP_002518842.1| arginyl-tRNA synthetase [Caulobacter crescentus NA1000] gi|39932235|sp|Q9A347|SYR_CAUCR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|254782950|sp|B8H4W0|SYR_CAUCN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|13425063|gb|AAK25321.1| arginyl-tRNA synthetase [Caulobacter crescentus CB15] gi|220965578|gb|ACL96934.1| arginyl-tRNA synthetase [Caulobacter crescentus NA1000] Length = 600 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 137/608 (22%), Positives = 234/608 (38%), Gaps = 119/608 (19%) Query: 48 NAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVV 107 N A+ ++ +P IA +V +K DP + SV IAG GFIN+ +S L I Sbjct: 42 NGALAAAKSAKRNPREIAVQVVDILKGDPRLASVEIAGVGFINMRVSDEALSARAREIA- 100 Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167 S G L+ +V I++ N PMHVGH R +++G+++ L F G +V + + Sbjct: 101 SDDRTGAQLLETPRRVLIDYAGPNVAKPMHVGHLRASIIGESVKRLYRFRGDDVVGDAHF 160 Query: 168 NDAGAQINTLALSVFWR--YQQALYNNDSDLPEGY------------------------Y 201 D G Q+ L ++ + AL + P G+ Y Sbjct: 161 GDWGFQMGLLISAIMDEDPFINALMEKLPEAPRGFSSADEAKVMAEFEKRITLADLDRIY 220 Query: 202 PGVYLKH----VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257 P ++ KE A K ++EL N ++ + V + + AL + D Sbjct: 221 PAASVRQKEDPAFKERARKATAELQN--GRFGYRLLWRHFVNVSRVALEREFHALGVDFD 278 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 ++ E D + D+I+ + Q +G+L D+ + R G Sbjct: 279 LWKGESD--------VNDLIEPMVLQ-LEAKGLLV-----------QDQGARIVRVAREG 318 Query: 318 DDVDRP---LLKSDGSYTYFAADLAYFKCKYERGFDN--MIYVMG---SDHSGYVKRLEA 369 D D P ++ S+GS Y DLA + FD ++Y + +DH V R A Sbjct: 319 DKRDVPPLLVVSSEGSAMYGTTDLATI-LDRRKSFDPHLILYCVDQRQADHFETVFR-AA 376 Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------------- 415 A +E+ A ++ + DG P K RAG + L +++ Sbjct: 377 YLAGYAEEGALEHIGFGTMNGA--DGKPFKT--RAGGVLKLHDLIEMAREKARERLREAG 432 Query: 416 ---------------EVGSDSVRFMML--WRKNSELLDFD-FCKVKEQSKENPVFYVQYA 457 +VG +++F L +R S + D D F + K P Y+ Y Sbjct: 433 LGAELSEEQFEDTAHKVGVAALKFADLQNFRGTSYVFDLDRFTSF--EGKTGP--YLLYQ 488 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 R +S+ R+A + V + + +E L + L + ++ A + Sbjct: 489 SVRIKSVLRRAAE----------SGAVAGRVEIHEPAERDLAMLLDAFEGALQEAYDKKA 538 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 P +A + Y LA F ++ + A+ L RL L + L+++ Sbjct: 539 PNFVAEHAYKLAQSFSKFYAA------CPIMSADTETLRASRLTLAETTLRQLELALDLL 592 Query: 578 GVESPNEM 585 G+E+P M Sbjct: 593 GIEAPERM 600 >gi|116208750|ref|XP_001230184.1| arginyl-tRNA synthetase [Chaetomium globosum CBS 148.51] gi|88184265|gb|EAQ91733.1| arginyl-tRNA synthetase [Chaetomium globosum CBS 148.51] Length = 633 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 129/579 (22%), Positives = 241/579 (41%), Gaps = 110/579 (18%) Query: 76 PDVDSVF---IAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLI---------GKGTK 122 PD D +F F+ +L P+ + ++ I G ++G N KG K Sbjct: 94 PDNDPLFEKPTVVNYFMAFFLKPAPVVETVIPLIQKHGAQFGCNKFNGLKDPKDPSKGHK 153 Query: 123 -VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 + +EF S N P H GH R ++G LA+L +G++V R Y+ D G Q LAL+ Sbjct: 154 RMIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYQGAGWDVIRINYLGDWGKQYGLLALA- 212 Query: 182 FWRY--QQALYNNDSDLPEGYYPGVYLKHVGKELADKYS-----------SEL----LNF 224 F +Y ++AL + P + +Y++ + A+K +EL L+ Sbjct: 213 FEKYGDEEALTKD----PINHLFQLYVRINSEMTAEKEQIEKRKQDGEDVTELEANSLDE 268 Query: 225 PEEKWLPIVKDYSVQAMMKIIR----------DDLKALNIQHDIFISEDDFHRGDPSPIR 274 ++ + D A+ + R D LNI+ D + G+ Sbjct: 269 QARRYFKKMTDRDPVALAQWKRFRDLSITRYQDTYARLNIKFDEY-------SGESQVSE 321 Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD---VDRPLLKS-DGS 330 D+++ + ++ ++K K D + F++ + G + +++P++K DG+ Sbjct: 322 DMMEKIGQE----------MQNKGISKEDKGAMIVDFQALVPGKEGKRLEKPIVKKRDGT 371 Query: 331 YTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA-----AVSEKKAQINV- 383 Y D++ ++E+ FD+MIYV+ S ++K+L + ++ K IN Sbjct: 372 ALYLTRDISELLGRHEKYKFDHMIYVVASAQDLHLKQLFKIIELLGHNEIASKCQHINFG 431 Query: 384 -------------LLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRF--M 425 L +++R D M M K + + + D +G SV M Sbjct: 432 LVLGMSTRKGTVKFLDDILRDVADKMHETMKKNETKYSQVENPDATADTLGISSVMVQDM 491 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 R N+ + D + P Y+QYA+AR SI R+A+ D + +++ Sbjct: 492 TGKRINNYTFNMD-AMTSFEGDTGP--YLQYAHARVSSIRRRAE--LSDAEIASADLSLL 546 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 + T + ++ LA +P ++N EP + YL+ + + H + Sbjct: 547 TE-----THAVNIVRLLALWPDTVQNTLRTLEPTTVLTYLFKMTHALSSSYDHLQ----- 596 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 V + R+L R+ L A +++ +G+ ++G+ SP E Sbjct: 597 --VVGSERELMKARMALYDAAHTVLGNGMRLLGL-SPVE 632 >gi|326435569|gb|EGD81139.1| arginyl-tRNA synthetase [Salpingoeca sp. ATCC 50818] Length = 701 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 77/342 (22%), Positives = 153/342 (44%), Gaps = 64/342 (18%) Query: 43 GHLSTNAAMILSRPL---GL--DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G NAAM ++ L G+ +P +A+ I + +P VD + +AG GFIN++++ S+ Sbjct: 94 GSYQCNAAMNINNKLKKQGVKSNPREVAQKIADSLPENPVVDKLEVAGPGFINVHVAKSF 153 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 ++ + ++ G I + KV ++F S N MHVGH R ++G++++ ++ F+ Sbjct: 154 VQAQTNKLLRKGALA--PPIDRKLKVIVDFSSPNIAKEMHVGHLRSTIIGESISRVLEFA 211 Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198 G+E R ++ D G Q L L F++ + L++ D + + Sbjct: 212 GHETHRVNHVGDWGTQFGMLIAHLKDEFPDYKTKAPPIGDLQAFYKASKVLFDQDEEFKK 271 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y G P V + Q + + R + + + + D+ Sbjct: 272 RAYGETVKLQSGD-------------------PDVT-LAWQLICDVSRREFQDIYNRLDV 311 Query: 259 FISE--DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 I E + F++ S ++ +++ L ++G V + P +++ + S Sbjct: 312 TIEEKGESFYQ---SRMQGVVEELTKKGLVIDDPENPG------------RKIAWTSARE 356 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMG 357 ++ ++KSDG+YTY +DLA + + E D ++YV+G Sbjct: 357 QTNIPLIVVKSDGAYTYDTSDLATLRYRVQEEKADWVVYVVG 398 >gi|207092413|ref|ZP_03240200.1| arginyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1] Length = 186 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 51/202 (25%), Positives = 99/202 (49%), Gaps = 25/202 (12%) Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 R +D P KMSKRAG+FI ++ V+D+VG D++RF+ L ++ L+FD +K+Q Sbjct: 3 ARTLKDNEPYKMSKRAGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSS 62 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--SEFDTSELQLIVHLAEYP 506 NP++Y+ YA +R ++ ++ F + + Q + E L+ P Sbjct: 63 NPIYYIHYANSRIHTMLEKSP----------FSKEEVLQTPLKNLNAEEKYLLFSALSLP 112 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVH 564 + +E++ K+ Y LAS FH ++ G+ + P+ + + L++ Sbjct: 113 KAVESSFEEYGLQKMCEYAKTLASEFHRFYNAGKILDTPKAKEL-----------LKICL 161 Query: 565 AVASIINSGLNIIGVESPNEMS 586 V+ + + ++G+E ++S Sbjct: 162 MVSLSLTNAFKLLGIEIKTKIS 183 >gi|328947509|ref|YP_004364846.1| arginyl-tRNA synthetase [Treponema succinifaciens DSM 2489] gi|328447833|gb|AEB13549.1| Arginyl-tRNA synthetase [Treponema succinifaciens DSM 2489] Length = 609 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 145/627 (23%), Positives = 266/627 (42%), Gaps = 115/627 (18%) Query: 17 EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP 76 +IDC ++++K+ + +E P G L + ++ + P IA + +K Sbjct: 24 KIDCP-EIDEKL---VRVENPPRPEMGDLGS-PMFPFAKMFRMAPPAIAASVAQSLKKSA 78 Query: 77 DVDSV------FIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGR-NLIGK----GTKVN 124 + D+ F A ++N+ L+ + IL+SIV G YG + GK G ++ Sbjct: 79 ENDASLASLGEFDAAGPYVNIKLNKAASASGILASIVSQGENYGSFDSAGKKPLEGQRIM 138 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVF 182 +EF S N P+H+GH R +G++++ ++ +G EV + IN+ G I + LA +F Sbjct: 139 VEFSSPNTNKPLHLGHLRNDALGESVSRILKKAGAEVFKVDLINNRGIHICKSMLAYKLF 198 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKH-VGKELA--DKYSSELLNFPEEKWLPIVK----D 235 + ++ PE G+ H VG+ DKYS E ++ +VK D Sbjct: 199 -------HEAKNETPESL--GMKGDHFVGQCYVEFDKYSKEHPEAVQQAEEMLVKWEQGD 249 Query: 236 YSVQAMMKI--------IRDDLKALNIQHDIFISEDD-FHRGDPSPIRDIIDNLARQGYV 286 V+ + + +++ K I D F E D + +G +D I +G Sbjct: 250 KEVRGLWQKMNSWTLDGLKETYKRTGIVFDKFYFESDTYLKG-----KDEILKGLEKGVF 304 Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD---RPLLKSDGSYTYFAADLAYFKC 343 ++ P S D+ K G D D + LL+ DG+ Y D+ Sbjct: 305 FKA---PDGSVRIDVTDVVGK---------GKDEDSHEKVLLRKDGTSVYITQDIGTAIS 352 Query: 344 KY-ERGFDNMIYVMGSDHSGYVK----RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 ++ + F+ ++YV+ S+ + + K L+ + +EK ++ L L Sbjct: 353 RHNDWPFNQLVYVVASEQNYHFKILFHILKKLGFGWTEKLFHLSYGLVNLPS-------G 405 Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFM-MLWRKNS-------------ELLDFDFCKVK- 443 +M R G + ++D + + +++ + R NS LD+ V Sbjct: 406 RMKSREGTVVDADDLIDSLHAQALKAIEERGRDNSVGNPDEVAEKVALAALDYYLLNVAP 465 Query: 444 --------EQS---KENPVFYVQYAYARCRSIFRQAKD--IFPDLDFDLFPRNVIPQESE 490 E+S N Y+QY AR SI R+AK+ + P + F +++ ESE Sbjct: 466 VKDMLFNPEESLSFNGNTGPYLQYMGARIASILRKAKEQGLEPSSSVEDF--SLLTAESE 523 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550 + LI L +P +++ + +P +A YLYD++ F + R+ P + + Sbjct: 524 W-----ALIKDLERFPSIVQKSAETLDPSGMASYLYDVSKSFSAFY---RDCP-IVGTAS 574 Query: 551 NNRKLTMMRLQLVHAVASIINSGLNII 577 N +L RL L S++ SG++++ Sbjct: 575 ENERLAKARLALAQCTLSVLKSGMDLV 601 >gi|237717232|ref|ZP_04547713.1| arginyl-tRNA synthetase [Bacteroides sp. D1] gi|237718987|ref|ZP_04549468.1| arginyl-tRNA synthetase [Bacteroides sp. 2_2_4] gi|262405999|ref|ZP_06082549.1| arginyl-tRNA synthetase [Bacteroides sp. 2_1_22] gi|294647975|ref|ZP_06725526.1| arginine--tRNA ligase [Bacteroides ovatus SD CC 2a] gi|294806911|ref|ZP_06765736.1| arginine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b] gi|229443215|gb|EEO49006.1| arginyl-tRNA synthetase [Bacteroides sp. D1] gi|229451765|gb|EEO57556.1| arginyl-tRNA synthetase [Bacteroides sp. 2_2_4] gi|262356874|gb|EEZ05964.1| arginyl-tRNA synthetase [Bacteroides sp. 2_1_22] gi|292636691|gb|EFF55158.1| arginine--tRNA ligase [Bacteroides ovatus SD CC 2a] gi|294445940|gb|EFG14582.1| arginine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b] Length = 605 Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 130/610 (21%), Positives = 246/610 (40%), Gaps = 145/610 (23%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P A+ I +K + + F KGF+NL ++ + ++L+ I +YG + Sbjct: 56 PEQTAQEIGEYLKANDPAVAAFNVIKGFLNLTIASATWIELLNEIQADE-QYGLMQVTDA 114 Query: 121 TK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 + V IE+ S N P+H+GH R ++G+ LA+++A +G +V + +ND G I L Sbjct: 115 SPLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHICKSML 174 Query: 180 SVFWRYQQALYNNDSDLPE----------GYYPGVYLKHVG---KELADKYSSELLNFPE 226 + W+ Y N + PE G Y + KH KEL K++++ ++ E Sbjct: 175 A--WKK----YGN-GETPETSGKKGDHLVGDYYVSFDKHYKAEVKELMAKFTAQGMSGDE 227 Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286 K K + +M+ R+ L + GDP +R + + + +V Sbjct: 228 AK----AKAEAESPLMQEAREMLV-------------KWEAGDPE-VRGLWEMM--NNWV 267 Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRST-----------------------------MVG 317 Y G +T +K + ++ + S + Sbjct: 268 YAGF-----DETYKKMGVSFDKIYYESNTYLEGKEKVMEGLEKGFFYKKEDGSVWADLTA 322 Query: 318 DDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375 + +D + LL+ DG+ Y D+ K ++ + + MIYV+G++ + + + L + + Sbjct: 323 EGLDHKLLLRGDGTSVYMTQDIGTAKLRFADYPINKMIYVVGNEQNYHFQVLSILLDKLG 382 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416 + + V + +G KM R G + +++E Sbjct: 383 FEWGKSLVHFSYGMVELPEG---KMKSREGTVVDADDLMEEMIATAKETSQELGKLDGLT 439 Query: 417 ----------VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAY 458 VG ++++ +L RKN E +DF+ N ++QY Y Sbjct: 440 QEEADDIARIVGLGALKYFILKVDARKNMTFNPKESIDFN---------GNTGPFIQYTY 490 Query: 459 ARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515 AR +S+ R+A + + P+ IP E E LI +A++ V++ A Sbjct: 491 ARIQSVLRKAAESGIVIPEQ---------IPAGIELSEKEEGLIQMVADFAAVVKQAGED 541 Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575 P +A Y YDL ++ + ++ N + + R+ L VA ++ G+N Sbjct: 542 YSPSIIANYTYDLVKEYNQFYHD------YSILREENEAVKVFRIALSANVAKVVRLGMN 595 Query: 576 IIGVESPNEM 585 ++G+E P+ M Sbjct: 596 LLGIEVPSRM 605 >gi|218290406|ref|ZP_03494536.1| arginyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1] gi|218239534|gb|EED06728.1| arginyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1] Length = 566 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 136/592 (22%), Positives = 245/592 (41%), Gaps = 90/592 (15%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P + A G L+ +R + +P+ IAE + R++ V+S A KGF+N+ Sbjct: 26 MLEYPPNPALGDLAL-PCFQFAREMRKNPVQIAEELAERVRQADGVESA-QAEKGFLNIR 83 Query: 93 LSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+ S + +++ + S E G+G I++ S N P VGH R ++G L Sbjct: 84 LARSEFAERVVGQAIASVHELFSEERGRGRTAVIDYSSPNIAKPFGVGHLRSTIIGHALK 143 Query: 152 SLMAFSGYEVTREYYINDAGAQIN-TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +M G+ V ++ D G Q +A + W N+ ++ + ++ +V Sbjct: 144 RMMREDGWRVEGVNHLGDWGTQFGKVIAAYLKW-------GNEDEVRKDPVKELFRLYV- 195 Query: 211 KELADKYSSELLNFPEEK-----WLPIVKDYSVQAMM---KIIRDDLKALNIQHDIFISE 262 ++ E + PE + W +++ +A I + L+A +D+ E Sbjct: 196 -----RFHQEAESSPELEDEGRLWFKKLEEGDPEATRLWRWFIDESLRAFKQVYDLLGVE 250 Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322 + + G+ S D +D + Q +G+L K + + D+ D Sbjct: 251 FEHYIGE-SFYNDKMDAIV-QELREKGLLV--KDQGAEVVDLSA-------------FDM 293 Query: 323 P---LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378 P ++KSDG+ Y DLA +++ G D ++YV+G++ + +++ V + Sbjct: 294 PPCIIVKSDGTSIYATRDLAAADYRHKAFGADTLLYVVGAEQKLHFEQVFKVLELMGRDY 353 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITL-----------RHVVDE----------- 416 A+ N + + + +G ++S R G + L R ++DE Sbjct: 354 AK-NCVHVQFGLMKFNGQ--RLSTRRGHVVYLEDVLQKAIEEARAIIDEKNPALENKDAI 410 Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +V F L +DF + V E YVQY +AR S+ R K Sbjct: 411 ARQVGVGAVIFNDLKTYRVHEVDFRYEDVLNFDGETGP-YVQYTHARASSVLR--KAEAD 467 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 P + E D +E LI LA+ +E A +P +A Y + F+ Sbjct: 468 AAAAKWAP------DYEPDDAEWALIFLLAQANESLERAVDTYDPSVIARYALQMCHAFN 521 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++P +QA+ T RL L AV + L ++G+E+P EM Sbjct: 522 RFY---HDHP---ILQADEPARTS-RLALTQAVREALAKSLYLLGIEAPEEM 566 >gi|126695545|ref|YP_001090431.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301] gi|126542588|gb|ABO16830.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301] Length = 604 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 152/652 (23%), Positives = 258/652 (39%), Gaps = 124/652 (19%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L F L + L++ D K + E IL + +I + G N + LS+ +P Sbjct: 8 LTKQFEQSLLDSLEKNDKKGEFE--ILRKNLITQSSKEEFGDYQCNVCLSLSKIFKKNPR 65 Query: 63 TIAELIVARIKIDPDV----DSVFIAGKGFINLYLSPSYL-RKILSSIVV--SGIEYGRN 115 I+ + +K + + S+ IAG GFIN+ L L +I+S+I +GI R Sbjct: 66 DISNDFINLLKKNKSIAKLCKSLEIAGPGFINIKLKDEVLINEIISNIQCNRAGIPLIRK 125 Query: 116 LIGKG--TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173 + +G KV ++F S N MHVGH R ++GD+++ + GYEV R ++ D G Q Sbjct: 126 DLDRGLSNKVIVDFSSPNIAKEMHVGHLRSTIIGDSISRIFELRGYEVLRLNHVGDWGTQ 185 Query: 174 INTLALSVFWRYQQALYNND---------SDLPEGYYPGVYLKHVGKELADKYSSELLNF 224 L + + LY+ND SDL E Y E + E++ Sbjct: 186 FGMLITQL-----KDLYSNDLEEIGKIKISDLVEFYKESKKRFDNESEFQKRSREEVVKL 240 Query: 225 PEE-----KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP--SP-IRDI 276 K ++ D S Q +I K L I+ + RG+ +P ++ + Sbjct: 241 QSGDIKSIKAWKLLCDQSRQEFDEI----YKNLKIKIE--------ERGESFYNPFLKSV 288 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL----LKSDGSYT 332 ID+L + + E KC +F M + +PL K DG + Sbjct: 289 IDDLNLKKILVED--------QGAKC-------VFLDGMTNKE-GKPLPLIIQKKDGGFN 332 Query: 333 YFAADLAYFKCKYER---GFD--NMIYVMG---SDHSGYVKRLEAVAAAVSEKKAQINVL 384 Y DLA + ++ + G D +IYV ++H V ++ A + E Q++ + Sbjct: 333 YATTDLAAIRYRFNKPPNGDDASRIIYVTDHGQANHFAGVFQVAKKAKWIPE-NCQVDHV 391 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------- 416 LV+ DG +K R G+ I L+ +++E Sbjct: 392 PFGLVQGI-DGKKLKT--REGETIRLKDLLNEAVRRAKEDLLKRLEDEDRYENEEFIANT 448 Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 +G +V++ L + F F K+ + N Y+ Y R I R+ ++ Sbjct: 449 SRIIGFGAVKYADLSQNRITNYQFSFDKMLSLNG-NTAPYLLYTLVRILGIKRKNDFVYD 507 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 DF + SE +LI L ++ VI + P +L YL++L F+ Sbjct: 508 SKDFQYVNYE--------NKSEWKLIRKLLKFDEVIISIEKDLMPNRLCNYLFELCQTFN 559 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P L+ + + + RL L A + L ++G+E+ M Sbjct: 560 RFYDQV---PILK----EEKNIKISRLNLCDLTAKTLKLSLELLGIETLERM 604 >gi|304384147|ref|ZP_07366600.1| arginine--tRNA ligase [Prevotella marshii DSM 16973] gi|304334774|gb|EFM01051.1| arginine--tRNA ligase [Prevotella marshii DSM 16973] Length = 604 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 141/631 (22%), Positives = 245/631 (38%), Gaps = 131/631 (20%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +++ + GHL T + P + + I +K + + F KGF+NL Sbjct: 28 IQLQKTKREFEGHL-TLVTFPFVKTARKKPEEVGQEIGECLKANCTAVASFNVVKGFLNL 86 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTL 150 ++PS +L+ I +G + + V IE+ S N P+H+GH R ++G +L Sbjct: 87 VVAPSAWLSLLNDINADE-HFGEKAVTSNSPLVMIEYSSPNTNKPLHLGHVRNNLLGWSL 145 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQA--LYNNDSDLPEGYYPGVYLK 207 + +M +G +V + +ND G I L+ W + + D G Y + K Sbjct: 146 SQIMQANGNKVVKTNIVNDRGIHICKSMLAWQKWGHGETPETSGKKGDHLIGDYYVAFDK 205 Query: 208 H----------------VGKELADKYSSELLNFPEEKWLPIVK----DYSVQAMMKIIRD 247 H + +E A+K + E E +VK D V+ + K++ D Sbjct: 206 HYREEIKMLKAQLMNEGIDEETAEKRAKEEAPLMMEAREMLVKWEQGDPEVRRLWKMMND 265 Query: 248 --------DLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 +AL + D I+ D + G + + L R GI K Sbjct: 266 WVYAGFDETYRALGVSFDKIYYESDTYLEGKAK----VEEGLKR------GIF-ERKGDG 314 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVM 356 + D+ + L + LL+SDG+ Y D+ ++ R F D MIYV+ Sbjct: 315 SVWADLSNEGL----------DQKLLLRSDGTSVYMTQDIGTADMRF-RDFPIDKMIYVV 363 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI---KMSKRAGDFI----- 408 G++ + + + L + + K + ELV + + KM R G + Sbjct: 364 GNEQNYHFQVLSILLDRLGFKWGK------ELVHFSYGMVELPNGKMKSREGTVVDADEL 417 Query: 409 -----------------TLRHVVDE--------VGSDSVRFMML---WRKN-----SELL 435 L +V +E VG ++++ +L RKN E + Sbjct: 418 IEAMIESAARMSDDKVNKLENVSEEERHEIARIVGMGALKYFILKVDARKNMLFNPEESI 477 Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTS 494 DF+ N ++QY YAR RSI R+A+ + PD + P Sbjct: 478 DFN---------GNTGPFIQYTYARIRSILRKAEGLNIPDQLSEDLP---------LGAK 519 Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554 E +LI + E+ V+ + P +A Y Y+L F+ + + + Sbjct: 520 EAELIQKMDEFGAVVVQSGKDYSPSGIANYCYELTKEFNQFYHD------YSILHEEDEG 573 Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++RL L VA +I +G+ ++G+E P M Sbjct: 574 KKIVRLMLAKNVAKVIKNGMALLGIEVPERM 604 >gi|110637981|ref|YP_678188.1| arginyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406] gi|110280662|gb|ABG58848.1| arginyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406] Length = 621 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 138/633 (21%), Positives = 264/633 (41%), Gaps = 106/633 (16%) Query: 12 KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVAR 71 K L+E + E I++E R G L T + + P I I A Sbjct: 36 KGLLQEFSITVSAED-----ILLEPTRKDFEGSL-TFVVFPYIKQAKVAPEQIGARIGAF 89 Query: 72 IKID-PDVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129 D P V + F KGF+N+ + + ++ ++ +S + +Y + GKG KV +E+ S Sbjct: 90 CAADIPAVVASFNVVKGFLNVVFNDALWVEQLYASFLRP--DYAQLQDGKGEKVMVEYSS 147 Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189 N P+H+GH R +G +++ ++ +G++V + +ND G I ++ YQ++ Sbjct: 148 PNTNKPLHLGHLRNNFLGYSISQILKANGFDVIKANLVNDRGIHICKSMIA----YQKSG 203 Query: 190 YNN-------DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 D G Y + K + KE+ ++ + +K PI+K+ QAM+ Sbjct: 204 LGETPVSTGMKGDHLVGKYYVAFDKQLKKEVEALVAAGVEEDKAKKEAPILKE--AQAML 261 Query: 243 -------KIIRDDLKALN---------IQHDIFISEDDFHRGDPSPI--RDIIDNLARQG 284 K + D K +N I ++ D F+ + + +DI++ Sbjct: 262 LKWEQGDKEVYDLWKTMNGWVYDGFNASYKKIGVTFDHFYYESNTYLLGKDIVE------ 315 Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK 344 EG+ K ++ D + T G D ++ +L+SDG+ Y DL + K Sbjct: 316 ---EGL---AKGVFNKRAD---GSVWIDLTAEGLD-EKLVLRSDGTSVYITQDLGTAELK 365 Query: 345 YER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSK 402 Y+ G +YV+G++ + L + + + A + + +V L KM Sbjct: 366 YKDFGCKRSVYVVGNEQDYHFIVLIHILKKLGKPYANGVYHMSYGMVDLPSG----KMKS 421 Query: 403 RAGDFITLRHVVDE-----------------------------VGSDSVRFMMLWRKNSE 433 R G + +VDE +G ++++ +L + Sbjct: 422 REGTVVDADDLVDEMIATAKERTLEQGKTDGFSEEQATHLYETLGLGALKYFLLKVDPKK 481 Query: 434 LLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492 + F+ + + Q P ++QY +AR +I R+A ++ ++ L +VI + F+ Sbjct: 482 RMMFNPEESIDFQGHTGP--FIQYTHARISAILRKAAEL--GINEQLPAGHVINKLHPFE 537 Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552 S L++ L+ +P I A P +A Y++D+A ++ ++ + Q + Sbjct: 538 VSVLEM---LSRFPEKIREAGNDYSPSTIANYIFDVAKEYNRFYA------EVSIFQEPD 588 Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +L R+ AVA I G+ ++G+E P +M Sbjct: 589 EQLKSFRIAFCRAVAKTIKDGMLLLGIEVPEKM 621 >gi|326793312|ref|YP_004311133.1| arginyl-tRNA synthetase [Clostridium lentocellum DSM 5427] gi|326544076|gb|ADZ85935.1| arginyl-tRNA synthetase [Clostridium lentocellum DSM 5427] Length = 571 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 133/595 (22%), Positives = 243/595 (40%), Gaps = 92/595 (15%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK--GFIN 90 +IE P + A G + L++ L P IA+ IV + ++D + A +IN Sbjct: 27 MIEVPNNVAMGDYAF-PCFKLAKALRKAPPMIAKDIVDTL---GEIDFIEKAENVNAYIN 82 Query: 91 LYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 +L+ S ++++IL +++ YG V +++ S N P HVGH R V+G++ Sbjct: 83 FFLNRSVFVKEILLAVLADRESYGLAKEKNKGNVVVDYSSPNIAKPFHVGHLRSTVIGNS 142 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 L + GY ++ D G Q L ++ + +Y + + E V Sbjct: 143 LYHIFEALGYNCIGVNHLGDWGTQFGKLIVA-YKKYSSKEEVEEKGISELLRIYVLFHDE 201 Query: 210 GKE------LADKYSSELLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 KE A Y +++ EE KW K+ S+ ++ K L + D Sbjct: 202 AKEHPEMDQEARNYFTKMEQGDEEALALWKWF---KEVSLNEFERV----YKMLGVTFDS 254 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + E ++ + I+D+ D +G++ + + D + Sbjct: 255 YNGEAFYNDKMDAVIKDLED---------KGLIEISEGAKIVRLDEENMAPCL------- 298 Query: 319 DVDRPLLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDH----SGYVKRLEAV- 370 + K+DGS Y D+ Y K YE F IYV + + K +E + Sbjct: 299 -----ITKNDGSSLYATRDITAAKYRKETYE--FKKCIYVTALQQNLHFAQWFKVIEKME 351 Query: 371 -------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 A +S + + + L ++++ D + ++ D Sbjct: 352 WDWAKDLVHVPFGMVSMEGGAKLSTRSGNV-IFLEDILKEAVDKTKKIIEEKNPDLDNKD 410 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKD 470 V ++VG +V F ++ + + F + +V + Q + P YVQY +AR S+ ++A Sbjct: 411 EVANQVGIGAVIFDDMYNNIIKDIQFSWERVLDFQGETGP--YVQYTHARACSLLKKA-- 466 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 LD D P I + + D + L + LA++ VIE+A EP +A Y DLA Sbjct: 467 ---GLDIDNLPDLEISESAIADDTVLAVAKELADFKNVIESAAANFEPSYIARYAVDLAQ 523 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ ++ E P L + + RL +V A I + L+++G+++P +M Sbjct: 524 AFNKFYN---EQPIL----VGDEAVKNSRLAVVIATKYTIKNALHLLGIKAPVQM 571 >gi|260437972|ref|ZP_05791788.1| arginine--tRNA ligase [Butyrivibrio crossotus DSM 2876] gi|292809598|gb|EFF68803.1| arginine--tRNA ligase [Butyrivibrio crossotus DSM 2876] Length = 588 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 125/591 (21%), Positives = 246/591 (41%), Gaps = 76/591 (12%) Query: 36 RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95 RP C + N AM ++ P I + +VA ++ + + V GFIN+ +S Sbjct: 33 RPDLCEY---QCNGAMAAAKEYKKAPFMIGDEVVAILQDNSAFEKVECIKPGFINMVMSA 89 Query: 96 SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155 ++ + ++ + ++G + K V +++ AN P+H+GH R AV+G+++ + Sbjct: 90 DFIGGYVRAMALED-KFGCDCEPKDETVFVDYGGANVAKPLHIGHLRSAVIGESVKRICK 148 Query: 156 FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND-------SDLP------EGYYP 202 F+GY+ + ++ D G Q+ + + R Y +D ++ P E YP Sbjct: 149 FAGYKTIGDVHLGDWGLQMGLIITELKERKPDLPYFDDNFTGEYPAEAPFTISELEEIYP 208 Query: 203 GVYLKHVGKELAD-----KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257 K KE A+ + ++ LL + + K + + + ++ + LN+ D Sbjct: 209 CASGK--SKEYAEYKKSAQNATYLLQNGHRGYTALWK-HIINVSVADLKKNYGNLNVHFD 265 Query: 258 IFISEDDFHRGDPSPIRDIIDN---LARQGYVYEGILPPPKSKTTQKCDMDRKQLL--FR 312 ++ E D ++D++D QG + I S+ C + + + Sbjct: 266 LWKGESDAQPYIADMVKDMVDRGIAHESQGAIVVDIAEENDSRELPPCIIQKSDGAANYE 325 Query: 313 STMVGDDVDRPLLKSDGSYTYFA---ADLAY---FKCKYERG---------FDNMIYVMG 357 ++ + ++R L + SY Y A +L Y F+ + G F + G Sbjct: 326 TSDLATLIEREKLYAPKSYIYLADKRQELHYTQFFRVARKAGIVSPDTELKFIGFGTMNG 385 Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCE-LVRLYRDGMPIK-MSKRAGDFITLRHVVD 415 SD + R Q VL E L++ D + K M+ R D R+ Sbjct: 386 SDGKPFKTR-------------QGGVLRLEYLIKEIEDKVYEKIMANRTVDESEARNTAK 432 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 VG ++++ L + S+ FD + + P Y+ Y R +SI ++ + + Sbjct: 433 MVGLAALKYGDLSNQASKDYVFDIDRFTSFEGDTGP--YILYTIVRIKSILKK----YEN 486 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 + + ESE SE L++ L +I+ A P+K+ ++YDL++ F+ Sbjct: 487 AGGVVSGIHTANPESE---SERSLMLVLTGMQDMIKTAYEESAPHKICKFIYDLSNAFN- 542 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H+ H E L N +K + L+ ++ + ++++G+E+P M Sbjct: 543 HFYH--ETKILSEEDENKKK---GYIALIKLTKDVLETCVDLLGIEAPERM 588 >gi|293368715|ref|ZP_06615320.1| arginine--tRNA ligase [Bacteroides ovatus SD CMC 3f] gi|292636180|gb|EFF54667.1| arginine--tRNA ligase [Bacteroides ovatus SD CMC 3f] Length = 605 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 129/607 (21%), Positives = 244/607 (40%), Gaps = 139/607 (22%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P A+ I +K + + F KGF+NL ++ + ++L+ I +YG + Sbjct: 56 PEQTAQEIGEYLKANDPAVAAFNVIKGFLNLTIASATWIELLNEIQADE-QYGLMQVTDA 114 Query: 121 TK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 + V IE+ S N P+H+GH R ++G+ LA+++A +G +V + +ND G I L Sbjct: 115 SPLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHICKSML 174 Query: 180 SVFWRYQQALYNNDSDLPE----------GYYPGVYLKHVG---KELADKYSSELLNFPE 226 + W+ Y N + PE G Y + KH KEL K++++ ++ E Sbjct: 175 A--WKK----YGN-GETPETSGKKGDHLVGDYYVSFDKHYKAEVKELMAKFTAQGMSGDE 227 Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286 K K + +M+ R+ L + GDP +R + + + +V Sbjct: 228 AK----AKAEAESPLMQEAREMLV-------------KWEAGDPE-VRGLWEMM--NNWV 267 Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRST-----------------------------MVG 317 Y G +T +K + ++ + S + Sbjct: 268 YAGF-----DETYKKMGVSFDKIYYESNTYLEGKEKVMEGLEKGFFYKKEDGSVWADLTA 322 Query: 318 DDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375 + +D + LL+ DG+ Y D+ K ++ + + MIYV+G++ + + + L + + Sbjct: 323 EGLDHKLLLRGDGTSVYMTQDIGTAKLRFADYPINKMIYVVGNEQNYHFQVLSILLDKLG 382 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416 + + V + +G KM R G + +++E Sbjct: 383 FEWGKSLVHFSYGMVELPEG---KMKSREGTVVDADDLMEEMIATAKETSQELGKLDGLT 439 Query: 417 ----------VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAY 458 VG ++++ +L RKN E +DF+ N ++QY Y Sbjct: 440 QEEADDIARIVGLGALKYFILKVDARKNMTFNPKESIDFN---------GNTGPFIQYTY 490 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 AR +S+ R+A + + IP E E LI +A++ V++ A P Sbjct: 491 ARIQSVLRKAAE------SGIVISEQIPAGIELSEKEEGLIQMVADFAAVVKQAGEDYSP 544 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 +A Y YDL ++ + ++ N + + R+ L VA ++ G+N++G Sbjct: 545 SIIANYTYDLVKEYNQFYHD------YSILREENEAVKVFRIALSANVAKVVRLGMNLLG 598 Query: 579 VESPNEM 585 +E P+ M Sbjct: 599 IEVPSRM 605 >gi|145631016|ref|ZP_01786792.1| arginyl-tRNA synthetase [Haemophilus influenzae R3021] gi|144983483|gb|EDJ90959.1| arginyl-tRNA synthetase [Haemophilus influenzae R3021] Length = 260 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 44/135 (32%), Positives = 72/135 (53%), Gaps = 2/135 (1%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LGL+P A+ ++ +++ + + IAG GFIN++L+P++L + Sbjct: 37 GDYQANGIMAAAKKLGLNPREFAQKVLDNLQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 S+ +S G K T V I++ S N MHVGH R ++GD +A + F G+ V Sbjct: 97 SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTL 177 R ++ D G Q L Sbjct: 155 RANHVGDWGTQFGML 169 >gi|331091306|ref|ZP_08340146.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA] gi|330404467|gb|EGG84011.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA] Length = 588 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 130/614 (21%), Positives = 245/614 (39%), Gaps = 122/614 (19%) Query: 36 RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP 95 RP C + N AM ++ P+ IA +V +++ + V GFIN+ LS Sbjct: 33 RPDLCEY---QCNGAMAAAKTYKKAPIMIAGDVVEKLQNSEAISKVEAVNPGFINIKLSE 89 Query: 96 SYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 ++ L+ + G+E + + I++ AN P+HVGH R A++G+++ Sbjct: 90 EFVADYLNKMSEDDHLGLEQNE----EPKTIVIDYGGANVAKPLHVGHLRTAIIGESVKR 145 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-------------DLPEG 199 + F G EV + ++ D G Q+ + + R + Y +++ D E Sbjct: 146 IARFMGDEVIGDVHLGDWGYQMGLIITELKKRKPELPYFDENFAGEYPEEAPFTIDELEE 205 Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV------KDYSV--QAMMKIIRDDLKA 251 YP A Y+ E ++ EE K Y+ + +M++ DLK Sbjct: 206 IYP----------TASAYAKEHDDYKEEALHATYLLQNGHKGYTAIWKHIMRVSVTDLKK 255 Query: 252 ----LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307 LN+ D++ E D P D+++ L ++GY D Sbjct: 256 NYANLNVDFDLWKGESDAQPYIP----DMVEYLKKEGY----------------ARYDDG 295 Query: 308 QLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSG 362 L+ D + P +LKSDG+ Y DLA + E+ + D +IYV+ Sbjct: 296 ALVIDVKEETDTKEIPPCMILKSDGASLYGTTDLATL-IEREKLYNPDEVIYVVDKR--- 351 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRL------YRDGMPIKMSKRAGDFITLRHVVDE 416 + L V S +KA I +L + +DG P K R G + L +++ + Sbjct: 352 --QELHFVQVFRSARKAHIVKDDTKLTFIGFGTMNGKDGKPFKT--REGGVMRLENLIGD 407 Query: 417 VGSDSVRFMM--------LWRKNSELLDFDFCK---VKEQSKENPVF------------- 452 + +M RK ++++ K + Q+ ++ VF Sbjct: 408 IEERMYGKIMENRAIEEEEARKTAKIVGLSAIKYGDLSNQASKDYVFDVDRFTSFEGNTG 467 Query: 453 -YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511 Y+ Y R +SI + ++ P +++ D SE L++ + ++ VIE Sbjct: 468 PYILYTIVRIKSILAKYTEM------KTTPARASVKKAVSD-SEKALMLEITKFNSVIET 520 Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571 A + P+K+ Y+Y+LA+ F+ + + + N + + ++ + Sbjct: 521 AYEEKAPHKICAYVYELANAFNRFYHE------TKILAEENEERQKSFISMLLLTKEVFE 574 Query: 572 SGLNIIGVESPNEM 585 + ++++G E+P M Sbjct: 575 ACVDMLGFEAPERM 588 >gi|224532728|ref|ZP_03673345.1| arginine--tRNA ligase [Borrelia burgdorferi WI91-23] gi|224512346|gb|EEF82730.1| arginine--tRNA ligase [Borrelia burgdorferi WI91-23] Length = 585 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 121/540 (22%), Positives = 218/540 (40%), Gaps = 92/540 (17%) Query: 88 FINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N+ +S Y+ + + YG + K+ +EF S N P+HVGH R V+ Sbjct: 84 YLNIKISRKEYINNTIQMVNAQKDTYGTSKYLDNKKIILEFSSPNTNKPLHVGHLRNDVI 143 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRY---QQALYNNDSDLPEGYY 201 G++L+ ++ G ++T+ IND G I + LA F ++A D + + Y Sbjct: 144 GESLSRILKAVGAKITKINLINDRGVHICKSMLAYKKFGNGITPEKAFKKGDHLIGDFYV 203 Query: 202 PGVYLKHVGK-ELADKYSSELLNFPEEK-------WLPIVKDYSVQAMMKIIRDDLKALN 253 Y K+ + E A+K +LL E+K W + K ++++ I++ + N Sbjct: 204 K--YNKYSQENENAEKEIQDLLLLWEQKDASTIELWKKLNK-WAIEG----IKETYEITN 256 Query: 254 IQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPPPKSKTTQKCDMDRKQ 308 D I++ + F G ++++ +G+ Y+ I S + +K D KQ Sbjct: 257 TSFDKIYLESEIFEIG-----KNVVLEGLEKGFCYKREDGAICIDLPSDSDEKADTKVKQ 311 Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRL 367 + L++S+G+ Y DL + E F MIYV+GS+ + K L Sbjct: 312 -------------KVLIRSNGTSIYLTQDLGNIAVRTKEFNFKEMIYVVGSEQIQHFKSL 358 Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 VA + K + + L + DG KM R G+ I +++ + + M Sbjct: 359 FFVAEKLGLSKNKKLIHLSHGMVNLVDG---KMKSREGNVIDADNLISNLIELIIPEMTQ 415 Query: 428 WRKNSE----------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRS 463 +N E L + +K ++ VF Y+QY AR S Sbjct: 416 KIENKESAKKNALNIALGAIHYYLLKSAIHKDIVFNKKESLSFTGNSGPYIQYVGARINS 475 Query: 464 IFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 I + K + +DF+L E ++I ++E I NA P Sbjct: 476 ILEKYKALSIPVMEKIDFELLKH----------EKEWEIIKIISELEENIINAAKDLNPS 525 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 L Y Y LA F ++ ++ + NN LT R++ + + I + + ++ + Sbjct: 526 ILTSYSYSLAKHFSTYYQ------EVKVIDTNNINLTAARIEFLKTILQTIKNCMYLLNI 579 >gi|170114617|ref|XP_001888505.1| predicted protein [Laccaria bicolor S238N-H82] gi|164636617|gb|EDR00911.1| predicted protein [Laccaria bicolor S238N-H82] Length = 587 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 108/472 (22%), Positives = 193/472 (40%), Gaps = 73/472 (15%) Query: 102 LSSIVVSGI-EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 L+ + SG EYG N GKG +V IE+ S N H+GH R ++G LA+L G+E Sbjct: 109 LTHLTPSGQPEYGSNDSGKGKRVIIEYSSPNIVKEFHLGHLRSTIIGAFLANLYKACGWE 168 Query: 161 VTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE 220 V Y+ D G Q +A Q ++ D P + VY+K V K+L + Sbjct: 169 VISMNYLGDWGTQFGMVATGYEKYGSQEEFDQD---PIMHLYNVYVK-VTKDLE---TDP 221 Query: 221 LLNFPEEKWLPIVKDYSVQAMMKI----------IRDDLKALNIQHDIFISEDDFHRGDP 270 + +W ++D + K ++ LNI+ D++ E + + Sbjct: 222 KVKVEAARWFKRMEDGDEDVLKKWHGWRETSLEKYQEAYDQLNIKFDVYTGESNVSK--- 278 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDG 329 + + L G + + + ++ D+++ L P++ K+DG Sbjct: 279 ESMDKALVQLQDMGLISD-------RDSAKEVDLNKWNL-----------KAPIVRKTDG 320 Query: 330 SYTYFAADLAYFKCKYER-GFDNMIYVMGSDH----SGYVKRLEAVAAAVSEKKAQINVL 384 + TY D+ +YER FD MIYV+G+ + + K +E + ++ IN Sbjct: 321 TSTYLTRDIGGAIERYERYKFDKMIYVVGAAQDFHLAQFFKIVELMGFPWAKNLLHINYG 380 Query: 385 LCELVRLYRDGMPI---KMSKRAGDFITLRHVVD---------------EVGSDSVRFMM 426 + + +R R G + ++ K+AG+ + + + E+G ++ Sbjct: 381 MVQGMRT-RKGTAVFLDRIIKKAGNVMHEQMKKNDEKYAVIQDPQATSLEIGITGIKIQD 439 Query: 427 LWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 + K F++ ++ + P Y+QYA++R SI R+ + P L P + I Sbjct: 440 MAAKRINDYTFNWDRMLSFEGDTGP--YLQYAHSRLASIGRKNPQLLP-----LPPTSQI 492 Query: 486 PQESEFDTSELQLIVH-LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 + S + I L YP V+ A EP + + + LA W Sbjct: 493 ATHALAQYSNAREIAFLLGTYPDVVNVALKTHEPSGVVTFAFKLAHAISTAW 544 >gi|295085554|emb|CBK67077.1| arginyl-tRNA synthetase [Bacteroides xylanisolvens XB1A] Length = 605 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 130/610 (21%), Positives = 246/610 (40%), Gaps = 145/610 (23%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P A+ I +K + + F KGF+NL ++ + ++L+ I +YG + Sbjct: 56 PEQTAQEIGEYLKANDPAVAAFNVIKGFLNLTIASATWIELLNEIQADE-QYGLVQVTDA 114 Query: 121 TK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 + V IE+ S N P+H+GH R ++G+ LA+++A +G +V + +ND G I L Sbjct: 115 SPLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHICKSML 174 Query: 180 SVFWRYQQALYNNDSDLPE----------GYYPGVYLKHVG---KELADKYSSELLNFPE 226 + W+ Y N + PE G Y + KH KEL K++++ ++ E Sbjct: 175 A--WKK----YGN-GETPETSGKKGDHLVGDYYVSFDKHYKAEVKELMAKFTAQGMSDDE 227 Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286 K K + +M+ R+ L + GDP +R + + + +V Sbjct: 228 AK----AKAEAESPLMQEAREMLV-------------KWEAGDPE-VRGLWEMM--NNWV 267 Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRST-----------------------------MVG 317 Y G +T +K + ++ + S + Sbjct: 268 YAGF-----DETYKKMGVSFDKIYYESNTYLEGKEKVMEGLEKGFFYKKEDGSVWADLTA 322 Query: 318 DDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375 + +D + LL+ DG+ Y D+ K ++ + + MIYV+G++ + + + L + + Sbjct: 323 EGLDHKLLLRGDGTSVYMTQDIGTAKLRFADYPINKMIYVVGNEQNYHFQVLSILLDKLG 382 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416 + + V + +G KM R G + +++E Sbjct: 383 FEWGKSLVHFSYGMVELPEG---KMKSREGTVVDADDLMEEMIATAKETSQELGKLDGLT 439 Query: 417 ----------VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAY 458 VG ++++ +L RKN E +DF+ N ++QY Y Sbjct: 440 QEEADDIARIVGLGALKYFILKVDARKNMTFNPKESIDFN---------GNTGPFIQYTY 490 Query: 459 ARCRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515 AR +S+ R+A + + P+ IP E E LI +A++ V++ A Sbjct: 491 ARIQSVLRKAAESGIVIPEQ---------IPAGIELSEKEEGLIQMVADFAAVVKQAGED 541 Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575 P +A Y YDL ++ + ++ N + + R+ L VA ++ G+N Sbjct: 542 YSPSIIANYTYDLVKEYNQFYHD------YSILREENEAVKVFRIALSANVAKVVRLGMN 595 Query: 576 IIGVESPNEM 585 ++G+E P+ M Sbjct: 596 LLGIEVPSRM 605 >gi|167763757|ref|ZP_02435884.1| hypothetical protein BACSTE_02137 [Bacteroides stercoris ATCC 43183] gi|167697873|gb|EDS14452.1| hypothetical protein BACSTE_02137 [Bacteroides stercoris ATCC 43183] Length = 605 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 138/625 (22%), Positives = 254/625 (40%), Gaps = 116/625 (18%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 +I +++ + GHL+ L R P A+ I ++ + S F KGF+N Sbjct: 27 QIQLQKTKKEFEGHLTLVVFPFL-RMSKKGPEQTAQEIGEYLQANEPSVSAFNVIKGFLN 85 Query: 91 LYLSPSYLRKILSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 L ++ S ++L+ I +YG V IE+ S N P+H+GH R ++G+ Sbjct: 86 LTIASSAWIELLNGIHADA-KYGIVAATDNAPLVMIEYSSPNTNKPLHLGHVRNNLLGNA 144 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE----------G 199 LA++++ +G V + +ND G I L+ W+ Y N + PE G Sbjct: 145 LANIISANGNRVVKTNIVNDRGIHICKSMLA--WQK----YGN-GETPESSGKKGDHLIG 197 Query: 200 YYPGVYLKHVG---KELADKYSSELLNFPEEKWL-----PIVKDYSVQAMMKIIRDDLKA 251 Y + KH KEL K+ SE ++ E K P++K+ + + ++K D + Sbjct: 198 DYYVAFDKHYKAEVKELMAKFQSEGMSEEEAKAKAEAESPLMKE-AREMLVKWEAGDPEV 256 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 + + D + G R + + Y E L K K + + K + Sbjct: 257 RTLWKKM---NDWVYAGFDETYRMMGVTFDKIYYESETYLEG-KEKVMEGLE---KGFFY 309 Query: 312 R-------STMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHS- 361 R + + G+ +D + LL++DG+ Y D+ K ++ + D M+YV+G++ + Sbjct: 310 RKEDGSVWADLTGEGLDHKLLLRADGTSVYMTQDIGTAKLRFADFPIDKMVYVVGNEQNY 369 Query: 362 -------------------------GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396 G V+ E + + L+ E++ ++ Sbjct: 370 HFQVLSILLDKLGFEWGKGLVHFSYGMVELPEGKMKSREGTVVDADDLMAEMINTAKE-- 427 Query: 397 PIKMSKRAGDFITLRHVVDE--------VGSDSVRFMML---WRKN-----SELLDFDFC 440 +G+ L + E VG ++++ +L RKN E +DF+ Sbjct: 428 ------TSGELGKLDGLTQEEADNIARIVGLGALKYFILKVDARKNMTFNPKESIDFN-- 479 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500 N ++QY YAR +S+ R+AK+ + L P E E LI Sbjct: 480 -------GNTGPFIQYTYARIQSVLRKAKEAGISVPAQL------PAGIELSEKEEGLIQ 526 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 +A++ +++ A P +A Y YDL ++ + ++ N + + RL Sbjct: 527 MVADFAAIVKQAGEDYSPSLIANYTYDLVKEYNQFYHD------FSILREENEAVKIFRL 580 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 L VA ++ G+ ++G+E P+ M Sbjct: 581 ALSENVAKVVRLGMGLLGIEVPDRM 605 >gi|55980067|ref|YP_143364.1| arginyl-tRNA synthetase [Thermus thermophilus HB8] gi|81364722|sp|Q5SM45|SYR_THET8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|17942832|pdb|1IQ0|A Chain A, Thermus Thermophilus Arginyl-Trna Synthetase gi|14275785|emb|CAC39622.1| arginyl-tRNA synthetase [Thermus thermophilus] gi|55771480|dbj|BAD69921.1| arginyl-tRNA synthetase [Thermus thermophilus HB8] Length = 592 Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 139/612 (22%), Positives = 246/612 (40%), Gaps = 141/612 (23%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112 L++ L P IA+ + R+ + V+ G G++N L L L + + Sbjct: 43 LAKELRKPPQAIAQELKDRLPLPEFVEEAVPVG-GYLNFRLRTEAL---LREALRPKAPF 98 Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172 R + V +E S NP +HVGH R +GD +A ++A++G EV YI+D G Sbjct: 99 PR----RPGVVLVEHTSVNPNKELHVGHLRNIALGDAIARILAYAGREVLVLNYIDDTGR 154 Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE----LLNFPE-E 227 Q A ++F L + GKE D ++ L PE E Sbjct: 155 QA---AETLFALRHYGLTWD-----------------GKEKYDHFAGRAYVRLHQDPEYE 194 Query: 228 KWLPIVKDYSVQAMMKIIRDD-----------LKALNIQHDIFISEDDFHRGDPSPIRDI 276 + P +++ +R++ + ALN ++D+ + E D R ++ Sbjct: 195 RLQPAIEEVLHALERGELREEVNRILLAQMATMHALNARYDLLVWESDIVRA--GLLQKA 252 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTY 333 + L + +V+ P + K MD ++ V ++ P LL+S+G+ TY Sbjct: 253 LALLEQSPHVFR----PREGKYAGALVMD-------ASPVIPGLEDPFFVLLRSNGTATY 301 Query: 334 FAADLAYFKCK-----------YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA--- 379 +A D+A+ K YE + + + Y + E V +++ Sbjct: 302 YAKDIAFQFWKMGILEGLRFRPYENPYYPGLRTSAPEGEAYTPKAEETINVVDVRQSHPQ 361 Query: 380 -----------------QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------ 416 + + L E V L +G +MS R G +++ V++E Sbjct: 362 ALVRAALALAGYPALAEKAHHLAYETVLL--EGR--QMSGRKGLAVSVDEVLEEATRRAR 417 Query: 417 -------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQY 456 V ++RF M+ + + +DF + + + P YVQY Sbjct: 418 AIVEEKNPDHPDKEEAARMVALGAIRFSMVKTEPKKQIDFRYQEALSFEGDTGP--YVQY 475 Query: 457 AYARCRSIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515 A+AR SI R+A + PDL S+ E L + L ++ + A Sbjct: 476 AHARAHSILRKAGEWGAPDL-------------SQATPYERALALDLLDFEEAVLEAAEE 522 Query: 516 QEPYKLAFYLYDLASVFHGHWSHGREN--PRLRFVQANNRKLTMMRLQLVHAVASIINSG 573 + P+ LA YL DLA+ ++ +++ REN P + A L +RL LV ++ + +G Sbjct: 523 RTPHVLAQYLLDLAASWNAYYN-ARENGQPATPVLTAPE-GLRELRLSLVQSLQRTLATG 580 Query: 574 LNIIGVESPNEM 585 L+++G+ +P M Sbjct: 581 LDLLGIPAPEVM 592 >gi|46200208|ref|YP_005875.1| arginyl-tRNA synthetase [Thermus thermophilus HB27] gi|81405227|sp|Q72GE2|SYR_THET2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|46197836|gb|AAS82248.1| Arginyl-tRNA synthetase [Thermus thermophilus HB27] Length = 592 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 138/612 (22%), Positives = 246/612 (40%), Gaps = 141/612 (23%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112 L++ L P IA+ + R+ + V+ G G++N L L L + + Sbjct: 43 LAKELRKPPQAIAQELKDRLPLPEFVEEAIPVG-GYLNFRLRTEAL---LREALRPKAPF 98 Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172 R + V +E S NP +HVGH R +GD +A ++A++G EV YI+D G Sbjct: 99 PR----RPGVVLVEHTSVNPNKELHVGHLRNIALGDAIARILAYAGREVLVLNYIDDTGR 154 Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE----LLNFPE-E 227 Q A ++F L + GKE D ++ L PE E Sbjct: 155 QA---AETLFALRHYGLTWD-----------------GKEKYDHFAGRAYVRLHQDPEYE 194 Query: 228 KWLPIVKDYSVQAMMKIIRDD-----------LKALNIQHDIFISEDDFHRGDPSPIRDI 276 + P +++ +R++ + ALN ++D+ + E D R ++ Sbjct: 195 RLQPAIEEVLHALERGELREEVNRILLAQMATMHALNARYDLLVWESDIVRA--GLLQKA 252 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTY 333 + L + +V+ P + K MD ++ V ++ P LL+S+G+ TY Sbjct: 253 LALLEQSPHVFR----PREGKYAGALVMD-------ASPVIPGLEDPFFVLLRSNGTATY 301 Query: 334 FAADLAYFKCK-----------YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA--- 379 +A D+A+ K YE + + + Y + E + +++ Sbjct: 302 YAKDIAFQFWKMGILEGLRFRPYENPYYPGLRTSAPEGEAYTPKAEETINVIDVRQSHPQ 361 Query: 380 -----------------QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------ 416 + + L E V L +G +MS R G +++ V++E Sbjct: 362 ALVRAALALAGYPALAEKAHHLAYETVLL--EGR--QMSGRKGLAVSVDEVLEEATRRAR 417 Query: 417 -------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQY 456 V ++RF M+ + + +DF + + + P YVQY Sbjct: 418 AIVEEKNPDHPDKEEAARMVALGAIRFSMVKTEPKKQIDFRYQEALSFEGDTGP--YVQY 475 Query: 457 AYARCRSIFRQAKDI-FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515 A+AR SI R+A + PDL S+ E L + L ++ + A Sbjct: 476 AHARAHSILRKAGEWGAPDL-------------SQATPYERALALDLLDFEEAVLEAAEE 522 Query: 516 QEPYKLAFYLYDLASVFHGHWSHGREN--PRLRFVQANNRKLTMMRLQLVHAVASIINSG 573 + P+ LA YL DLA+ ++ +++ REN P + A L +RL LV ++ + +G Sbjct: 523 KTPHVLAQYLLDLAASWNAYYN-ARENGQPATPVLTAPE-GLRELRLSLVQSLQRTLATG 580 Query: 574 LNIIGVESPNEM 585 L+++G+ +P M Sbjct: 581 LDLLGIPAPEVM 592 >gi|320450932|ref|YP_004203028.1| arginyl-tRNA synthetase [Thermus scotoductus SA-01] gi|320151101|gb|ADW22479.1| arginyl-tRNA synthetase [Thermus scotoductus SA-01] Length = 592 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 130/596 (21%), Positives = 236/596 (39%), Gaps = 109/596 (18%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112 L++ L P IAE + AR+ + P V+ V G G++N + L K + Sbjct: 43 LAKELRKPPQAIAEELKARLALPPFVEEVIPVG-GYLNFRIRTKDLLK-------EALRP 94 Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172 + V IE S NP +HVGH R +GD+LA ++ ++G V YI+D G Sbjct: 95 KEPFPKREGLVLIEHTSVNPNKELHVGHLRNIALGDSLARILDYAGRRVLVLNYIDDTGR 154 Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK-HVGKELADKYSS--ELLNFPEEKW 229 Q A ++F L + + + + Y++ H E + E+L+ E Sbjct: 155 QA---AETLFALRHYGLTWDGKEKYDHFAGNAYVRLHQDPEYPNLQGGIEEILHALERGE 211 Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 L + + A M +KALN +D+ + E D R + + L + +V+ Sbjct: 212 LREDVNRILLAQMAT----MKALNAHYDLLVWESDIVRA--GLLEKALRILEQSPHVFR- 264 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCK-- 344 P + K MD + ++ P L++S G+ TY+A D+A+ K Sbjct: 265 ---PTEGKYAGALVMDASPFI-------PGLEDPYFVLVRSGGAATYYAKDIAFQFWKMG 314 Query: 345 ---------YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV------------ 383 YE + + Y R + +++ Sbjct: 315 LLEGLYFQPYENPYYPALRTSAPQGEPYTPRARETINVIDVRQSHPQALVRAALALAGHP 374 Query: 384 --------LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416 L E V L +G +MS R G +++ V++E Sbjct: 375 ELAEGAFHLAYETVLL--EGK--QMSGRKGLAVSVDEVLEEAERRALAVIEEKNPDHPAK 430 Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAK 469 V ++RF M+ + + +DF + + + P YVQYA+AR SI R+A Sbjct: 431 EEAARMVALGAIRFAMVKTEPRKQIDFRYAEALSFEGDTGP--YVQYAHARAHSILRKAG 488 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 + + ++D ++ E +L + L ++ + A + P+ LA YL DL+ Sbjct: 489 E-WGEIDL-----------AQATPYERELALALLDFEEAVLEAAEEKTPHVLAQYLLDLS 536 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++ +++ + V L +RL LV ++ + +GL+++G+ +P M Sbjct: 537 ASWNAYYNAKEDGRPATPVLTAPPGLRELRLGLVRSLQETLKTGLSLLGIPAPEVM 592 >gi|325971806|ref|YP_004247997.1| arginyl-tRNA synthetase [Spirochaeta sp. Buddy] gi|324027044|gb|ADY13803.1| Arginyl-tRNA synthetase [Spirochaeta sp. Buddy] Length = 587 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 121/561 (21%), Positives = 232/561 (41%), Gaps = 83/561 (14%) Query: 61 PLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE-YGRNLIG 118 P +A + RI K+D + ++N+ + + L LS+++ E YG N Sbjct: 62 PPMLAATLKDRIEKLDQRPLGELLVAGPYLNVRIDMAALATSLSALIADKQERYGTNESM 121 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 +V IEF N P+H+GH R +G+++A+++ +G V + IN+ G I Sbjct: 122 APKRVTIEFSCPNTNKPLHLGHMRNDSLGESVAAILKANGATVRKVNLINNRGVHICKSM 181 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVY---LKHVGKE--LADKYSSELLNFPEEKWLPIV 233 L+ + ++ +S + + G Y KE A+ + E+L E ++ Sbjct: 182 LA-YQKFGNGETPQNSGIKGDHLVGKYYVKFAQWAKEDPTAEDQAQEMLRQWEAGNEQVI 240 Query: 234 KDYSVQAMMKI--IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN----LARQGYVY 287 + + + + + + I D + E + ++ I ++N G V+ Sbjct: 241 ALWKLMNGWTLDGLSESYIKMGISFDAYYYESETYQYGKDEILKGLENGVFYREEDGSVW 300 Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347 + P +D+K L L+ DG+ Y D+ +++ Sbjct: 301 VDLEP---------IKLDKKVL---------------LRKDGTSLYMTQDVGTAIMRHKD 336 Query: 348 G-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAG 405 FD++IYV+ S+ + + L V A + AQ ++ L +V L KM R G Sbjct: 337 WPFDSLIYVVASEQQYHFRVLFYVLAQLGYTWAQDLHHLSYGMVNLPEG----KMKSREG 392 Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLD-------------FDFCKVKEQSKENPVF 452 + +VD + S + R + ++ L+D ++ ++ ++ +F Sbjct: 393 TVVDADELVDTLTSLA-RKEIEAKEREALVDDVQKTSQSIALGALNYYLLQVTPTKDMIF 451 Query: 453 --------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498 Y+QY AR S+ R+ + + D+ F +++ + E +L Sbjct: 452 NPAESISFNGNTGPYLQYMGARISSMLRKYESEYADIRKLSFDSSLLTL-----SDEREL 506 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 I +A YP V+E A A +P L YLYDL+ +F W H +NP L+ A +L Sbjct: 507 IKQIALYPEVVEKAGAALDPSLLCTYLYDLSKLF-SRWYH--DNPILK---AATAELVRS 560 Query: 559 RLQLVHAVASIINSGLNIIGV 579 R++L V ++ + ++G+ Sbjct: 561 RIELASMVLQVLKNAFGLVGI 581 >gi|302671208|ref|YP_003831168.1| arginyl-tRNA synthetase ArgS [Butyrivibrio proteoclasticus B316] gi|302395681|gb|ADL34586.1| arginyl-tRNA synthetase ArgS [Butyrivibrio proteoclasticus B316] Length = 589 Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 123/615 (20%), Positives = 241/615 (39%), Gaps = 108/615 (17%) Query: 29 LDRIVIE-RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87 L R+ I RP C + N AM ++ G P IA+ + AR++ + D V G Sbjct: 25 LGRVTISNRPDLCEY---QCNGAMAGAKKYGKAPFIIADDVAARLQDNSMFDKVESVKPG 81 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 F+N+ +S + R + ++ +G + I++ N +HVGH R AV+G Sbjct: 82 FLNITVSGDFARGYIVKMLHEK-HFGVDRPAHEPTYIIDYGGPNVAKSLHVGHLRSAVIG 140 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 +++ ++ ++G +V + ++ D G Q+ + + R Y + + Y G Y K Sbjct: 141 ESIKRILKYTGNKVIGDAHLGDWGLQMGLVITELEVRKPDLCYFDPN------YEGPYPK 194 Query: 208 HVG---KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI-------------------- 244 +EL + Y + E++ K ++ A K+ Sbjct: 195 EAPFTVEELGEIYPAASAKSKEDEAF---KAKAMDATKKLQDGYKPYRALWHHIMNVSLA 251 Query: 245 -IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 ++ + K LN+ D++ E D DP I +++ + GY +E Sbjct: 252 DLKKNYKNLNVNFDLWKGESD---ADPV-IPGMVEYMKSHGYAHES-------------- 293 Query: 304 MDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYERGF-DNMIYVMGSD 359 + L+ D + P +LKSDG+ Y DLA K + + + +IYV+ Sbjct: 294 --QGALVVDVAEETDTKEVPPCMILKSDGASLYNTTDLATIKQRMDDNHPEGIIYVVDKR 351 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVG 418 Y ++ A + + + +DG P K RAG + L ++ E+ Sbjct: 352 QELYFTQVFRCARKTKLVMPETELHFVGFGTMNGKDGKPFKT--RAGGVMPLGDLIAEI- 408 Query: 419 SDSVRFMMLWRKNSELLD--------------FDFCKVKEQSKENPVF------------ 452 D + + N E+ + + + Q ++ +F Sbjct: 409 -DDKMYNRIKEGNPEMPEDEAKDTSHKIALSALKYGDLSNQPSKDYIFDIEKFTSFEGDT 467 Query: 453 --YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 Y+ Y R +SI ++ + ++ L P E L++ L + IE Sbjct: 468 GPYILYTMVRIKSILKKYEAEGGNVKEALLANPDSPAMKE-------LMLQLTRFADAIE 520 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A P ++ Y+YDL++ F+ + HG + +A+ K + + L+ ++ Sbjct: 521 GAAKDFAPNRICAYIYDLSNAFNSFY-HGTK----ILAEADPDKKSSY-IALLATTLKVL 574 Query: 571 NSGLNIIGVESPNEM 585 +G++++G ++P M Sbjct: 575 ETGIDLLGFDAPERM 589 >gi|212527372|ref|XP_002143843.1| arginyl-tRNA synthetase [Penicillium marneffei ATCC 18224] gi|210073241|gb|EEA27328.1| arginyl-tRNA synthetase [Penicillium marneffei ATCC 18224] Length = 653 Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 135/569 (23%), Positives = 239/569 (42%), Gaps = 106/569 (18%) Query: 89 INLYLSPSYLRK-ILSSIVVSGIEYGRNL-IG--------KGTK-VNIEFVSANPTGPMH 137 + + P L K ++S I+ + YG N +G KG K V +EF S N P H Sbjct: 119 LQFFFKPGPLTKTVISRILENKSTYGTNGNLGLRDPSDPSKGKKKVIVEFSSPNIAKPFH 178 Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSD 195 GH R ++G +A+L +G+EV R Y+ D G Q LA + F RY ++AL + Sbjct: 179 AGHLRSTIIGGFIANLFTITGWEVIRMNYLGDWGKQYGLLA-NGFERYGSEEALLKD--- 234 Query: 196 LPEGYYPGVYLKHVGKELAD-----KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250 P + VY+K + K++A K E + +EK + + + + + DD K Sbjct: 235 -PINHLFDVYVK-INKDMAVQEGPIKELRETIKQKKEKNEDVSAEEAELSKLVDASDDEK 292 Query: 251 ALNIQHDIFISEDDFHRGDPSPI------RDIIDNLARQGY--------VYEG---ILPP 293 A F S +D GDP + RD+ +Q Y VY G +LP Sbjct: 293 A----RRYFKSMED---GDPKALALWKRFRDLSIEKYKQIYARLNIDFDVYSGESQVLPE 345 Query: 294 P---------KSKTTQKCD----MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340 KS ++K + +D + F+ +G + +++ DG+ Y D+ Sbjct: 346 SLKKAYETMEKSGVSEKSEGAVIVDFTKHKFKK--LGKAI---VIRKDGTPLYLTRDIGA 400 Query: 341 FKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAA-----VSEKKAQINV----------- 383 ++++ FD MIYV+ + ++ +L V +++K IN Sbjct: 401 IVERHDKYQFDKMIYVVANQQDLHLAQLFKVTELMGHKDIADKCQHINFGMVRGMSTRKG 460 Query: 384 ---LLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLDF 437 L +++R D M M + ++ + D +G +V + K DF Sbjct: 461 TVKFLDDILRDVADKMHEVMKRNEDKYVQVDDPLATSDTLGITAVMVQDMSGKRVNGYDF 520 Query: 438 DFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 + + + P Y+QYA+AR SI R+A +I P+ D +++ ++ D Sbjct: 521 NLEAMTSFEGDTGP--YLQYAHARLSSIIRKA-EINPE-DLPKADLSILTEQHAID---- 572 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 L +LA++P V+ N EP + YL+ + + + LR V K+ Sbjct: 573 -LARYLAQWPDVVLNTVKTLEPTTVLTYLFRMTHMLSSSYD------ILRIV-GREEKVA 624 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R+ L + ++ +G+ ++G+ M Sbjct: 625 LARMALYASARQVLYNGMKLLGLNPVERM 653 >gi|2632103|emb|CAB11467.1| arginyl-tRNA synthetase [Arabidopsis thaliana] Length = 589 Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 120/530 (22%), Positives = 215/530 (40%), Gaps = 91/530 (17%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P + + ++ + V+S IAG GF+N+ LS ++ K + +++V GI+ + Sbjct: 70 PPAVGQALIQSLPTSEMVESCSIAGPGFVNVVLSSKWMAKSIENMLVDGIDTWAPTLSVK 129 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 V ++F S N MHVGH R ++GDTLA ++ +S EV R ++ D G Q L Sbjct: 130 RAV-VDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSKVEVLRRNHVGDWGTQFGMLIEF 188 Query: 181 VFWRY---QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237 +F ++ + DL Y + E +K ++ + P+ + Sbjct: 189 LFEKFPDTESVTETAIGDLQVFYRESKLKFDLNPEFKEKAQQAVVRL--QGGDPVYRQAW 246 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 + + +I R++ + + I + E +P I ++I+ L+ +G V E SK Sbjct: 247 AK-ICEISRNEFAKVYKRLRIELEEKGESFYNPY-IANVIEELSSKGLVEE-------SK 297 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA------------------ 339 +++F + G + ++KSDG + Y + DL Sbjct: 298 GA--------RVIF---IEGFKIPLIVVKSDGGFNYASTDLTALWYRLNEEKAEWIIYVT 346 Query: 340 ----------YFKCKYERGF---DNMIY----------VMGSDHSGYVKRLEAVAAAVSE 376 +FK + G+ D+ Y V+G D+ KR AA V Sbjct: 347 DVGQQQHFDMFFKAARKAGWLPDDDKTYPRVSHVGFGLVLGDDN----KRFRTRAAEV-- 400 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDF----ITLRHVVDEVGSDSVRFMMLWRKNS 432 V L +L+ +D + +R D L + + VG ++++ L Sbjct: 401 ------VRLADLLDEAKDRSKAALIERGKDKEWSPEELDQIAEAVGYGALKYADLKTNRI 454 Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492 F F ++ + V Y+ YA+AR SI R++ D+D +L I + Sbjct: 455 TGYTFSFDQMLNDKGDTAV-YLLYAHARICSIIRKSGK---DID-ELKKTGKIALDH--- 506 Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 +E L +HL ++ +E A P L YLY L+ F +S+ + N Sbjct: 507 AAERALGLHLLQFAETVEEACTTLLPNVLCKYLYYLSEEFTKFYSNCQVN 556 >gi|298480089|ref|ZP_06998288.1| arginine--tRNA ligase [Bacteroides sp. D22] gi|298273898|gb|EFI15460.1| arginine--tRNA ligase [Bacteroides sp. D22] Length = 605 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 129/607 (21%), Positives = 244/607 (40%), Gaps = 139/607 (22%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P A+ I +K + + F KGF+NL ++ + ++L+ I +YG + Sbjct: 56 PEQTAQEIGEYLKANDPAVAAFNVIKGFLNLTIASATWIELLNEIQADE-QYGLMQVTDA 114 Query: 121 TK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 + V IE+ S N P+H+GH R ++G+ LA+++A +G +V + +ND G I L Sbjct: 115 SPLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHICKSML 174 Query: 180 SVFWRYQQALYNNDSDLPE----------GYYPGVYLKHVG---KELADKYSSELLNFPE 226 + W+ Y N + PE G Y + KH KEL K++++ ++ E Sbjct: 175 A--WKK----YGN-GETPETSGKKGDHLVGDYYVSFDKHYKAEVKELMAKFTAQGMSDDE 227 Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286 K K + +M+ R+ L + GDP +R + + + +V Sbjct: 228 AK----AKAEAESPLMQEAREMLV-------------KWEAGDPE-VRGLWEMM--NNWV 267 Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRST-----------------------------MVG 317 Y G +T +K + ++ + S + Sbjct: 268 YAGF-----DETYKKMGVGFDKIYYESNTYLEGKEKVMEGLEKGFFYKKEDGSVWADLTA 322 Query: 318 DDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375 + +D + LL+ DG+ Y D+ K ++ + + MIYV+G++ + + + L + + Sbjct: 323 EGLDHKLLLRGDGTSVYMTQDIGTAKLRFADYPINKMIYVVGNEQNYHFQVLSILLDKLG 382 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416 + + V + +G KM R G + +++E Sbjct: 383 FEWGKSLVHFSYGMVELPEG---KMKSREGTVVDADDLMEEMIATAKETSQELGKLDGLT 439 Query: 417 ----------VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAY 458 VG ++++ +L RKN E +DF+ N ++QY Y Sbjct: 440 QEEADDIARIVGLGALKYFILKVDARKNMTFNPKESIDFN---------GNTGPFIQYTY 490 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 AR +S+ R+A + + IP E E LI +A++ V++ A P Sbjct: 491 ARIQSVLRKAAE------SGIVISEQIPAGIELSEKEEGLIQMVADFAAVVKQAGEDYSP 544 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 +A Y YDL ++ + ++ N + + R+ L VA ++ G+N++G Sbjct: 545 SIIANYTYDLVKEYNQFYHD------YSILREENEAVKVFRIALSANVAKVVRLGMNLLG 598 Query: 579 VESPNEM 585 +E P+ M Sbjct: 599 IEVPSRM 605 >gi|312066682|ref|XP_003136386.1| arginyl aa-tRNA synthetase 1 [Loa loa] gi|307768450|gb|EFO27684.1| arginyl aa-tRNA synthetase 1 [Loa loa] Length = 513 Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 110/453 (24%), Positives = 201/453 (44%), Gaps = 79/453 (17%) Query: 83 IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 +AG G+IN++L+ +++ +++I + GIE + + +V ++F S N MHVGH R Sbjct: 72 VAGPGYINIFLNKNWIAASIANIALKGIEIP---VIEKRRVVVDFSSPNIAKQMHVGHLR 128 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202 ++GD+++ L+ + G++V R +I D G Q L + Q N +++P P Sbjct: 129 STIIGDSISRLLTYVGFDVLRLNHIGDWGTQFGMLIAHL----QDCFPNFINEVP----P 180 Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVK------DY--SVQAMMKIIRDDLKALNI 254 L+ KE ++ + F + + K DY + Q + + R D + Sbjct: 181 ISDLQTFYKESKKRFDED-EAFKARAYQCVTKLQSFDPDYVKAWQMICDVSRKDFNQIYD 239 Query: 255 QHDIFISE--DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312 + I I E + F++ + + +D L G+L ++D + + R Sbjct: 240 RLGITIVERGESFYQKHMIELVEELDKL--------GVL-----------ELDEGRKILR 280 Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYV------- 364 VG V ++KSDG++TY +DLA K + + D +IYV+ + S + Sbjct: 281 ---VGGRVPLTVVKSDGAFTYDTSDLATLKYRLFVDKADWIIYVVDAGQSLHFELVYAAG 337 Query: 365 ----------KRLEAVAAA--VSEKKAQINVLLCELVR---LYRDGMP---IKMSKRAGD 406 KR+E V+ + E K + + VR L +G+ IK+ ++ D Sbjct: 338 QKLGWYSQTEKRVEFVSLGLVLGEDKKKFKTRSGDTVRLTDLLDEGVKRAEIKLQEKERD 397 Query: 407 FITLRHVV----DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462 + + + D V V++ L + ++ F F ++ + + N Y+ YA+AR + Sbjct: 398 KVMISEELTLARDAVAYGCVKYADLSQTRTQDYVFSFDRMLD-DRGNTAVYLLYAFARIK 456 Query: 463 SIFRQAKDIFPDLDFDL--FPRNVIPQE--SEF 491 SI R D+ L P V+P E SEF Sbjct: 457 SICRNTGVSDEDIHNYLCSLPNGVLPLEHKSEF 489 >gi|325268661|ref|ZP_08135291.1| arginine--tRNA ligase [Prevotella multiformis DSM 16608] gi|324989189|gb|EGC21142.1| arginine--tRNA ligase [Prevotella multiformis DSM 16608] Length = 606 Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 120/566 (21%), Positives = 226/566 (39%), Gaps = 106/566 (18%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 KGF+NL ++ + +L+ I + + V IE+ S N P+H+GH R + Sbjct: 81 KGFLNLVIAQAAWTGLLNDINADEKFGEKRVTADSPLVMIEYSSPNTNKPLHLGHVRNNL 140 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205 +G +LA +M +G +V + +ND G I L+ + ++ + + + G + Sbjct: 141 LGWSLAQIMEANGNKVVKTNIVNDRGIHICKSMLA-WLKWGNGITPEKAGKKGDHLIGDF 199 Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 K ++ + +E P +I++ H++ + + Sbjct: 200 YVLFDKHFKEECRQLQEQYEKEGMTPDAAKEKAGQEAPLIKE-------AHEMLVK---W 249 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPK------------SKT----TQKCDMD-RKQ 308 +GDP +R + + + +VY G K S T +K + K Sbjct: 250 EQGDPE-VRALWEKM--NSWVYAGFDETYKALGVSFDKIYYESNTYLVGKKKVEEGLEKG 306 Query: 309 LLFR-------STMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSD 359 L FR + + + +D+ LL + DG+ Y D+ + ++ + D MIYV+G++ Sbjct: 307 LFFRKDDNSVWADLTKEGLDQKLLLRKDGTSVYMTQDIGTAEMRFNDFPIDKMIYVVGNE 366 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----------- 408 + + + L + + K + V + +G KM R G + Sbjct: 367 QNYHFQVLSILLDRLGFKWGKDLVHFSYGMVELPNG---KMKSREGTVVDADDLVASMIE 423 Query: 409 -----------TLRHVVDE--------VGSDSVRFMML---WRKN-----SELLDFDFCK 441 L + +E VG ++++ +L RKN E +DF+ Sbjct: 424 NAKKLSEDKVNKLEGITEEEKNEIARIVGMGALKYFILKVDARKNMLFNPEESIDFN--- 480 Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQ--AKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 N ++QY YAR RSI R+ A+DI L P + + ++ + E++LI Sbjct: 481 ------GNTGPFIQYTYARIRSILRKAAAQDI-------LLPAS-LADDAPLNEKEIELI 526 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 L ++ + A I P +A Y Y+L F+ + + A+ + R Sbjct: 527 QKLNDFGTAVAQAGIDYSPSGIANYCYELTKEFNQFYHD------YSILSADTEAEKITR 580 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 L L VA +I +G+ ++G+E P M Sbjct: 581 LVLAKNVAKVIRNGMALLGIEVPERM 606 >gi|148927123|ref|ZP_01810752.1| Arginine--tRNA ligase [candidate division TM7 genomosp. GTL1] gi|147887417|gb|EDK72862.1| Arginine--tRNA ligase [candidate division TM7 genomosp. GTL1] Length = 530 Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 120/546 (21%), Positives = 210/546 (38%), Gaps = 105/546 (19%) Query: 84 AGKGFINLYL-SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 A GF+N+ L SP LS+ + Y K V E+ NP +H GH Sbjct: 46 AVSGFVNIRLKSPVLTEAALSAPEFTPESY------KDKVVVAEYSDPNPFKVLHAGHLY 99 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202 +VGD++A+L+ +G V R Y D G + S+ Sbjct: 100 TTIVGDSIAALVEAAGARVHRINYGGDVGLHVGRAMWSI--------------------- 138 Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA--LNIQHDIF- 259 ++H+G E +K E+ W + + Y D KA + I ++ Sbjct: 139 ---IRHLGGEYPEKLR-EVSTHERASW--VSRRYVEGTTAYETNDKAKAEIVEINKRVYK 192 Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGY--VYEGI-LPP-----PKSKTTQKC--------- 302 + ED+ H + + + G+ +Y+ + + P P+SK T K Sbjct: 193 LHEDNDHESSFAEVYWTCRQWSYDGFDAMYDRLQITPFEAYWPESKVTPKGIEIVQQGLK 252 Query: 303 ----DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG 357 + +F++ G R L SDG TY A DL K++ FD I + Sbjct: 253 DAIFEESNGATIFKAEEYGLHT-RVFLNSDGIPTYEAKDLGLAALKWQTFHFDKSIIITA 311 Query: 358 SDHSGY----VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 +D Y +K LE V+E+ + L +L G KMS R G+ + + Sbjct: 312 NDIVDYMKVVLKALEHFYPEVAERSTHLTHGLIKLP----GGK--KMSSRKGNTLLAADI 365 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF--------------YVQYAYA 459 ++ + + + L + +K++ + V+ Y+QYA+A Sbjct: 366 LEAAAEAATNSTIDESHGTVLAAVKYAFLKQRIGGDIVYEPEESVSLEGNSGPYIQYAHA 425 Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 R I R+A+ +++ + D +E +L + +YP V+ P+ Sbjct: 426 RACGILRKAQ------------KSIEVSITTLDETERELARKIGQYPTVLTETVDTLRPH 473 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 + YLY+LA F+ + R + + R+ RL LV A A ++ +GL ++ + Sbjct: 474 HICTYLYELAQAFNRFYEKSR-------IVGSEREAE--RLMLVRAYAGVLKNGLAVLRI 524 Query: 580 ESPNEM 585 +P M Sbjct: 525 TAPERM 530 >gi|238810261|dbj|BAH70051.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 553 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 103/542 (19%), Positives = 228/542 (42%), Gaps = 52/542 (9%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 H+ + L + + + +AE I R+ D V V I G +++ L+ L ++ Sbjct: 63 NHIECDIVFQLKKFSFIPYIELAEEIKKRLIKDSMVKDVTIDRYGLLHIVLNEKDLVSVV 122 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + ++ +YG+ KVNIE+ SA+P + + + R A+VG+T+A ++ + GY+VT Sbjct: 123 NEVIKKAYKYGQEK-KNNIKVNIEYTSASPLNSLTLMNARNALVGETIARILEYLGYQVT 181 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222 RE+ + ++ ++ V +Y ND+ + K++ + D Y Sbjct: 182 REFLVYPGLKKMEKVSQIVHEQYVNLFELNDNSIKVDKDILECAKNIKAQNGDLYLDIND 241 Query: 223 NFPEEKW-LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281 K+ L IV + ++ + LK L + DI +D +++ ID + Sbjct: 242 TIKRNKFDLAIVFYFLNKS-----KKQLKNLGVFFDIVSYFEDI------LVKEKIDKVL 290 Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341 +L P D L +T + D +R L+ +G+ +Y D+ Y Sbjct: 291 E-------LLSP--------FIYDNDSNLILNTNLDDSKERILVHRNGTSSYLLLDIIYH 335 Query: 342 KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401 K +R D +I ++ ++H+ Y L + ++ I++ CE ++ + M+ Sbjct: 336 LEKLKRA-DWIIDILDANHTQYSHSLISALKFLNAYNNNIDIAFCENFQIKENNEVKSMT 394 Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461 ++ + I + +V +V + ++F L + + + + ++ + ++ Y + Sbjct: 395 EKNQNVIFIDELVKKVNLNEIKFFFLEKSTKHQITIEKEILNQKKISHNFDFILNTYNKI 454 Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 + ++K+ + N + Q + +LI+ L +P V+ P+ L Sbjct: 455 NKLLDESKN-------NKCYCNKMNQNNFLS----KLILRLDYFPYVLRKVIKTLNPFYL 503 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 YL ++ + + + + F ++ AV ++ ++GLN++G++ Sbjct: 504 TKYLKEMCYLINQNLKDKLKKDYRNFY------------PILEAVKNVFDNGLNLLGIDF 551 Query: 582 PN 583 N Sbjct: 552 KN 553 >gi|182417146|ref|ZP_02948519.1| arginyl-tRNA synthetase [Clostridium butyricum 5521] gi|237668885|ref|ZP_04528869.1| arginine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378988|gb|EDT76494.1| arginyl-tRNA synthetase [Clostridium butyricum 5521] gi|237657233|gb|EEP54789.1| arginine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 562 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 122/531 (22%), Positives = 212/531 (39%), Gaps = 90/531 (16%) Query: 88 FINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N ++ + + L+ ++ G YG + IG+G V +E+ S N P HVGH + Sbjct: 77 YLNFFVDKGVFAKNTLNKVLEEGDNYGASNIGEGKTVCVEYSSPNIAKPFHVGHLFTTAI 136 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYYPGV 204 G++L + GY ++ D G Q L +S + W ++AL P + Sbjct: 137 GNSLYKMFKKEGYNTVGLNHLGDWGTQFGKL-ISAYNRWVDEEAL----EKAPIDELLRI 191 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVK-DYSVQAMMKIIRD-DLKALNIQHDIFISE 262 Y+K E A K S L + + + D A+ RD LK +DI + Sbjct: 192 YVKF--HEEAKKDPS-LEDEARANFKALENGDAEATALWNRFRDLSLKEFERVYDILDVK 248 Query: 263 DDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319 D G+ + ++D L +G + E S Q ++ +D Sbjct: 249 FDSLNGEAFYNDKMDVVVDELKEKGLLVE-------SNGAQ-------------VVMLED 288 Query: 320 VDRP---LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373 + P +LK+DG+ Y DLA Y K Y+ F +YV+G+ + + K++ V Sbjct: 289 YNMPPCIVLKADGASIYATRDLAAAMYRKKTYD--FHKCVYVVGTPQALHFKQVFKVLDL 346 Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL----------------------- 410 + A+ V + + + D K+S R G + L Sbjct: 347 AGHEWAKDCVHVGFGLVKFADR---KLSTRDGSIVLLDDLLREAVEKTMEAIKDKEEIKN 403 Query: 411 -RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQA 468 V ++G +V F L + + FD+ ++ + + P YVQYAYAR SI +A Sbjct: 404 KEEVAKKIGVGAVIFTYLKNSREKDIVFDWKEILSFEGETGP--YVQYAYARGNSILERA 461 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 + +D+ E +L+ L + VI A EP L Y+ ++ Sbjct: 462 GEFSGSIDYSKLS----------SKEEFELVKSLGNFNNVITLALDKLEPSILTRYVIEV 511 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 A F+ ++ + + +L RL LV A +I +GL ++G+ Sbjct: 512 AKGFNKFYNAH------SVLNLEDEELKRARLNLVKASLQVIKNGLELLGI 556 >gi|218295699|ref|ZP_03496495.1| arginyl-tRNA synthetase [Thermus aquaticus Y51MC23] gi|218243858|gb|EED10385.1| arginyl-tRNA synthetase [Thermus aquaticus Y51MC23] Length = 592 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 135/609 (22%), Positives = 240/609 (39%), Gaps = 135/609 (22%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112 L++ L P TIAE + +R+++ P V+ G G++N L L + ++ G Sbjct: 43 LAKELRKPPQTIAEELKSRLELPPFVEEAIPVG-GYLNFRLRTEDL--LEEALRPKGPFP 99 Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172 R + V IE S NP +HVGH R V+GD+LA ++ ++G EV YI+D G Sbjct: 100 KREGL-----VLIEHTSVNPNKELHVGHLRNIVLGDSLARILDYAGREVLVLNYIDDTGR 154 Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE----LLNFPE-E 227 Q A ++F L + GKE D ++ L PE E Sbjct: 155 QA---AETLFALRHYGLTWD-----------------GKEKYDHFAGRAYVRLHQDPEYE 194 Query: 228 KWLPIVKDYSVQAMMKIIRDD-----------LKALNIQHDIFISEDDFHRGDPSPIRDI 276 K P +++ +R++ + AL +D+ + E D R ++ Sbjct: 195 KLQPAIEEVLHALEQGELREEVNRILLAQMATMHALAAHYDLLVWESDIVRA--GLLKKA 252 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTY 333 + L + +V+ P + K MD + ++ P L++S G+ TY Sbjct: 253 LAILEQSPHVFR----PTEGKYAGALVMDASPFI-------PGLEDPYFVLVRSGGAATY 301 Query: 334 FAADLAYFKCK-----------YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 +A D+A+ K YE + + + Y R + + +++ Sbjct: 302 YAKDIAFQFWKMGLLEGLPFRPYENPYYPHLRTSAPEGEPYTPRAQETINVIDVRQSHPQ 361 Query: 383 V--------------------LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------ 416 L E V L +G +MS R G +++ V++E Sbjct: 362 ALVRAALALAGRPDLAQRAFHLAYETVLL--EGK--QMSGRKGLSVSVDEVLEEARRRAL 417 Query: 417 -------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQY 456 V ++RF M + + +DF + + + P YVQY Sbjct: 418 AVISEKNPDHPDKEEAARMVALGAIRFAMSKTEPRKQIDFRYQEALSFEGDTGP--YVQY 475 Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 A+AR +I R+A + P P ++ E +L + L ++ + A + Sbjct: 476 AHARAHAILRKAGEWGP------------PDPAQATPYERELALALLDFEEAVLEAAEEK 523 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 P+ LA YL DLA+ ++ +++ E V L +RL+LV ++ + +GL + Sbjct: 524 SPHVLAQYLLDLAAAWNAYYNAKEEGRPATPVLTAPEGLRELRLELVRSLQETLKTGLGL 583 Query: 577 IGVESPNEM 585 +G+ +P M Sbjct: 584 LGIPAPEVM 592 >gi|19173381|ref|NP_597184.1| ARGINYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1] gi|74621147|sp|Q8SRD8|SYR_ENCCU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|19170970|emb|CAD26360.1| ARGINYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1] Length = 563 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 113/518 (21%), Positives = 207/518 (39%), Gaps = 101/518 (19%) Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 +G N +GKG ++ +E+ S N H+GH R V+G + +L+ SGYE T Y D G Sbjct: 103 FGNNNVGKGKRMVVEYSSPNIAKIFHIGHLRTTVLGQFIVNLLRASGYETTSINYFGDWG 162 Query: 172 AQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLKHVGKEL----ADKYSSELLNF 224 Q + L + Y ++ +L P + VY+K D + E+ Sbjct: 163 KQFGFVLLGY------SKYGSEEELEKDPLKHLFNVYVKISADAEKNPDVDSEAKEIFRM 216 Query: 225 PEE---KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281 EE +W + + ++ + K LN++ D++ E ++ S + Sbjct: 217 MEEDKDEWCMNLWRRFRELSIEKYKVLYKRLNVEFDVYSGESMYNEKGKSIV-------- 268 Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341 ++ K D D ++ +G ++K+DG+ Y D+A Sbjct: 269 -------------ETSKQIKTDEDGSKVF----DLGKAGKVLVMKNDGTTLYITRDIAAA 311 Query: 342 KCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400 + E + +IYV+ S+ + + + L V + K + + G+ M Sbjct: 312 IERLEEYSPEKIIYVVSSEQNKHFEDLFGVLEMLGYDKDKFQHVSY--------GLVAGM 363 Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKN------------------SELLDFDFCKV 442 S RAG L ++ E ++ ++ +M+ N S LL DF Sbjct: 364 STRAGKVQLLEDIIQE-STEVMKNVMMSDNNKGSFTAAEMDQTAEVLAISTLLVMDFTAR 422 Query: 443 KEQSKENPV-----------FYVQYAYARCRSIFRQAKDI----FPDLDFDLFPRNVIPQ 487 + + E + Y+QYA+ R RSI + ++ +DF+L +P+ Sbjct: 423 RVKGYEFDIEKRARNTSGTGLYLQYAHCRLRSIETKNSNVDYNDIETIDFELIH---VPK 479 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 L L+ L + V+E EP ++ YL DLAS +G + R Sbjct: 480 -------VLNLVYKLLWFEHVVEKCLEDYEPSRIVTYLQDLASSINGAINILR------- 525 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V +++L RL ++ + ++++GL I+G N+M Sbjct: 526 VLGVDKELARARLLVLSSARIVLHNGLRILGATPLNKM 563 >gi|294669637|ref|ZP_06734704.1| hypothetical protein NEIELOOT_01538 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308550|gb|EFE49793.1| hypothetical protein NEIELOOT_01538 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 450 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 44/146 (30%), Positives = 76/146 (52%), Gaps = 1/146 (0%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 IV++ ++ HG N M ++ +P +A+ + ++ + ++S +AG GFINL Sbjct: 43 IVLQPTKNAEHGDYQINGVMAAAKRHNRNPRELAQQVADKLSGNHVIESAEVAGPGFINL 102 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L +L + LS + SG G K V I++ S N MHVGH R +++GD+++ Sbjct: 103 RLRADFLAQNLSHALHSG-HLGIRKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 161 Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177 ++ F G V R+ ++ D G Q L Sbjct: 162 RVLEFMGNTVIRQNHVGDWGTQFGML 187 >gi|145641731|ref|ZP_01797307.1| arginyl-tRNA synthetase [Haemophilus influenzae R3021] gi|145273545|gb|EDK13415.1| arginyl-tRNA synthetase [Haemophilus influenzae 22.4-21] Length = 419 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 2/135 (1%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ LGL+P A+ ++ ++ + + IAG GFIN++L+P++L + Sbjct: 37 GDYQANGIMAAAKKLGLNPREFAQKVLDNAQLSDIAEKLEIAGPGFINIFLNPTWLTTEI 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 S+ +S G K T V I++ S N MHVGH R ++GD +A + F G+ V Sbjct: 97 SA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLRSTIIGDAVARTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTL 177 R ++ D G Q L Sbjct: 155 RANHVGDWGTQFGML 169 >gi|157137800|ref|XP_001664040.1| arginyl-tRNA synthetase [Aedes aegypti] gi|108869646|gb|EAT33871.1| arginyl-tRNA synthetase [Aedes aegypti] Length = 557 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 119/502 (23%), Positives = 200/502 (39%), Gaps = 86/502 (17%) Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 K IEF S N P H GH R A++G+ LA++ G++V + Y+ D G Q L + V Sbjct: 104 KTLIEFSSPNIAKPFHAGHLRSAIIGNFLANIYHHLGHDVVKLNYLGDWGTQFGFLKMGV 163 Query: 182 FWR--YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV------ 233 + ++ + N + Y Y + E + + + E+ L + Sbjct: 164 ELKGLSREDIRKNPIKMLYKAYVYAYTQASTNEELQSRARTIFSDMEQGKLKDLDGWTDY 223 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 + Y+V + K+ L I D + E + GD I ++ L G + Sbjct: 224 RSYTVDELRKV----YDRLGITFDQYHWESQYGIGD---IAHVVSRLQENGLL------- 269 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNM 352 TQ D RK + + P++KSDGS Y D+A +++R FD Sbjct: 270 ----ITQ--DDGRKVVKVGPRNI------PIVKSDGSTLYLTRDIAALIDRHQRFTFDKA 317 Query: 353 IYVMGSDHSGYVKRLEAVAA-------------------AVSEKKAQ---INVLLCELVR 390 IYV+ + S + L ++A +S +K ++ +L E Sbjct: 318 IYVVDNAQSDHFAALASIAQQMGLPYASDIVHVKFGRVHGMSTRKGNAVFLSDILDEAEA 377 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKEN 449 L R +K S D I V +G+ +V L K + D+DF K Q+ + Sbjct: 378 LMRHKQ-VKKSTTKVDVINNPEVTSTLGTTAVVVNDL--KQRRMRDYDFSWDKALQTDGD 434 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 +QY + R S+ + A + PD + P+ ++P+ L LI +A Y ++ Sbjct: 435 CGIKLQYTHCRLWSLVKNADECCPD-NEQCQPK-LLPE-----PEALHLICEIANYDGIL 487 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN------RKLTMMRLQLV 563 A QE L YL+ L N R VQ N ++ + RL+L Sbjct: 488 TEAADKQEACILVNYLFGLC------------NAANRCVQTMNVKNELSKEKRIQRLKLF 535 Query: 564 HAVASIINSGLNIIGVESPNEM 585 + S++ G+ I+G++ EM Sbjct: 536 NTARSVLQHGMQILGLKPLLEM 557 >gi|308190281|ref|YP_003923212.1| arginine--tRNA ligase [Mycoplasma fermentans JER] gi|319777675|ref|YP_004137326.1| arginyl-tRNA synthetase [Mycoplasma fermentans M64] gi|307625023|gb|ADN69328.1| arginine--tRNA ligase [Mycoplasma fermentans JER] gi|318038750|gb|ADV34949.1| Arginyl-tRNA synthetase [Mycoplasma fermentans M64] Length = 543 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 103/542 (19%), Positives = 228/542 (42%), Gaps = 52/542 (9%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 H+ + L + + + +AE I R+ D V V I G +++ L+ L ++ Sbjct: 53 NHIECDIVFQLKKFSFIPYIELAEEIKKRLIKDSMVKDVTIDRYGLLHIVLNEKDLVSVV 112 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + ++ +YG+ KVNIE+ SA+P + + + R A+VG+T+A ++ + GY+VT Sbjct: 113 NEVIKKAYKYGQEK-KNNIKVNIEYTSASPLNSLTLMNARNALVGETIARILEYLGYQVT 171 Query: 163 REYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL 222 RE+ + ++ ++ V +Y ND+ + K++ + D Y Sbjct: 172 REFLVYPGLKKMEKVSQIVHEQYVNLFELNDNSIKVDKDILECAKNIKAQNGDLYLDIND 231 Query: 223 NFPEEKW-LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281 K+ L IV + ++ + LK L + DI +D +++ ID + Sbjct: 232 TIKRNKFDLAIVFYFLNKS-----KKQLKNLGVFFDIVSYFEDI------LVKEKIDKVL 280 Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341 +L P D L +T + D +R L+ +G+ +Y D+ Y Sbjct: 281 E-------LLSP--------FIYDNDSNLILNTNLDDSKERILVHRNGTSSYLLLDIIYH 325 Query: 342 KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401 K +R D +I ++ ++H+ Y L + ++ I++ CE ++ + M+ Sbjct: 326 LEKLKRA-DWIIDILDANHTQYSHSLISALKFLNAYNNNIDIAFCENFQIKENNEVKSMT 384 Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461 ++ + I + +V +V + ++F L + + + + ++ + ++ Y + Sbjct: 385 EKNQNVIFIDELVKKVNLNEIKFFFLEKSTKHQITIEKEILNQKKISHNFDFILNTYNKI 444 Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 + ++K+ + N + Q + +LI+ L +P V+ P+ L Sbjct: 445 NKLLDESKN-------NKCYCNKMNQNNFLS----KLILRLDYFPYVLRKVIKTLNPFYL 493 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 YL ++ + + + + F ++ AV ++ ++GLN++G++ Sbjct: 494 TKYLKEMCYLINQNLKDKLKKDYRNFY------------PILEAVKNVFDNGLNLLGIDF 541 Query: 582 PN 583 N Sbjct: 542 KN 543 >gi|156084636|ref|XP_001609801.1| arginyl-tRNA synthetase [Babesia bovis T2Bo] gi|154797053|gb|EDO06233.1| arginyl-tRNA synthetase, putative [Babesia bovis] Length = 581 Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 123/583 (21%), Positives = 219/583 (37%), Gaps = 122/583 (20%) Query: 43 GHLSTNAAMILSRPLGL-----DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N A+ L + +G P +AEL+ + I +V ++ +GF+ + LS + Sbjct: 42 GDFQWNDAISLYKAIGSTLQVGSPKELAELVKSHIS-SSTFSAVNVSPQGFLTVTLSKEF 100 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + + + G+ + KG +V ++F S N MHVGH R ++G++L+ ++ F Sbjct: 101 IEGEIRHLYKHGVSVPQA--PKGFRVAVDFSSPNIAKEMHVGHLRSTIIGESLSRILEFH 158 Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198 GY+V R ++ D G L + F++ +AL + D++ Sbjct: 159 GYDVLRINHLGDWGTHFGMLVEYMLAKHPDFMTNVPSISDFTQFYKEAKALMDADAEFKA 218 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK--DYSVQAMMKIIRDDLKALNIQH 256 V L G EL+ L E ++ I K D +++ + +D+ Sbjct: 219 RSRKRVVLLQSGDELSINVWKLLCQISEREFAKIYKMLDITIENCGESFYNDM------- 271 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 I D+++ L + V E + Q +F S Sbjct: 272 ----------------IPDVVNELKEKDLVVES---------------EGAQCVFTSV-- 298 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG-SDHSGYVKRLEAVAAAV 374 V +KSDGSY Y + DLA + + + G +IYV ++K E A Sbjct: 299 -SSVPLMAIKSDGSYGYDSTDLACIRYRIKTLGSKWLIYVTDVGQQEHFMKVFETARLAG 357 Query: 375 SEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDE----------------- 416 K ++ + L + +D K R+GD + L ++DE Sbjct: 358 WSKVDGQDIRIDHLGFGMVQDSSGNKFKTRSGDTVKLITLLDEAVSRATVELESRIKARQ 417 Query: 417 -----------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459 +G +V++ L + + F F + + + N Y+ YAYA Sbjct: 418 EEGETEIDINVPEVAKVLGYGAVKYFELRQNIANNYKFSFDHMLD-PRGNTAIYLLYAYA 476 Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEP 518 R IF +A + P + P+ + E+ L H+ + P V+ T Sbjct: 477 RICQIFHKA---------GIDPETLQPELLDLVHPLEISLAKHILKLPAVLHQITADFLI 527 Query: 519 YKLAFYLYDLASVFHGHWSH----GRENPRLRFVQANNRKLTM 557 KLA ++Y L+ F + G N + R + + K M Sbjct: 528 SKLADFVYALSVEFSSFYKQCKVIGDPNEKTRLLLCHATKTVM 570 >gi|149002907|ref|ZP_01827818.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69] gi|147758910|gb|EDK65905.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69] Length = 397 Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 83/300 (27%), Positives = 130/300 (43%), Gaps = 62/300 (20%) Query: 320 VDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374 ++ P L KSDG+ Y DLA Y K +Y+ F IYV+G + S + K+L+AV + Sbjct: 126 IEHPALIKKSDGATLYITRDLAAALYRKNEYQ--FAKSIYVVGQEQSAHFKQLKAVLQEM 183 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 + ++ + ++G K+S R G+ I L V E Sbjct: 184 GYDWSD-DITHVPFGLVTKEGK--KLSTRKGNVILLEPTVAEAVSRAKVQIEAKNPELEN 240 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG +++F L + DFD V + + P YVQYAYAR +SI R+A Sbjct: 241 KDQVAHAVGVGAIKFYDLKTDRTNGYDFDLEAMVSFEGETGP--YVQYAYARIQSILRKA 298 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 F S DT ++I + ++PR+I A EP +A + L Sbjct: 299 D----------FKPETAGNYSLNDTESWEIIKLIQDFPRIINRAADNFEPSIIAKFAISL 348 Query: 529 ASVFHGHWSHGR---ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A F+ +++H R E+P RL L +A A ++ L ++GVE+P +M Sbjct: 349 AQSFNKYYAHTRILDESPERD-----------SRLALSYATAVVLKEALRLLGVEAPEKM 397 >gi|255534410|ref|YP_003094781.1| arginyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10] gi|255340606|gb|ACU06719.1| Arginyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10] Length = 595 Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 123/516 (23%), Positives = 214/516 (41%), Gaps = 84/516 (16%) Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 K V IE+ S N P+H+GH R ++G ++A ++ GY V + IND G I Sbjct: 116 AKNQTVMIEYSSPNTNKPLHLGHIRNNLLGYSVAEILKADGYNVVKTQIINDRGIHICKS 175 Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYL----KHVGKELADKYSSELLNFPEEKWLPIV 233 L+ + RY + + L G Y K KE+A+ + +K PI+ Sbjct: 176 MLA-WQRYGEGSTPASTSLKGDKLVGNYYVEFDKTYKKEIAELVAQGKSEDEAKKEAPII 234 Query: 234 KDYSVQAMMKIIRDDLKALNIQHD----IFISED--------DF----HRGDPSPI-RDI 276 K+ + Q ++ ++D K + + ++ D DF + D + +DI Sbjct: 235 KE-AQQMLLSWEKNDEKVRELWKEMNTWVYAGFDQTYKRLGVDFDQVQYESDTYILGKDI 293 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336 I G +Y + + CD+ + G D ++ LL+SDG+ Y Sbjct: 294 IQQGLLTGALYR------REDGSVWCDLRDE---------GID-EKLLLRSDGTSVYMTQ 337 Query: 337 DLAYFKCKY-ERGFDNMIYVMGSDHSGYV----KRLEAVAAAVSEKKAQINVLLCELVR- 390 DL ++ + +IY +G++ + K L+ + + +E ++ + EL Sbjct: 338 DLGTAVQRFKDNDIQKLIYTVGNEQDYHFNVLFKILKKLGYSWAENLYHLSYGMVELPEG 397 Query: 391 --LYRDGMPI-----------KMSKRAGDFITLRHVVDE--------VGSDSVRFMMLWR 429 R+G + ++A D L ++ E VG ++++ ML Sbjct: 398 KMKSREGTVVDADDLMQEMYETAKEKAEDLGKLENLTIEEKEKSYETVGIGALKYFMLKV 457 Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489 + + F+ K + N ++QY YAR +S+ +A D R V E Sbjct: 458 DPRKKMLFN-PKDSVEFNGNTGPFIQYTYARIQSLLAKA---------DYQDRKVT--EY 505 Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549 E SE LI+++A + VI A P LA Y+YDL ++ + + NP L Sbjct: 506 EMSDSEKDLIMNIAAFKDVISKAADTLSPALLANYIYDLVKSYNSFYQN---NPILIQED 562 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N R+ RL+L A II GL ++G+E+ + M Sbjct: 563 QNMRQF---RLELSDLTAKIIKKGLKMLGIETVDRM 595 >gi|220909041|ref|YP_002484352.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 7425] gi|254782957|sp|B8HSK8|SYR_CYAP4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|219865652|gb|ACL45991.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 7425] Length = 585 Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 1/135 (0%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G +NA + L++ L P TIA IV +++ + IAG GFIN L SYL L Sbjct: 40 GDYQSNAPLPLAKQLNQPPRTIASTIVDHLEVGEAWEPPTIAGPGFINFTLKTSYLASQL 99 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + ++ G + + +V ++F S N MHVGH R ++GD LA ++ F G+EV Sbjct: 100 E-LRLTDPRLGISAVKLPLRVVVDFSSPNIAKEMHVGHLRSTIIGDCLARILEFLGHEVL 158 Query: 163 REYYINDAGAQINTL 177 R ++ D G Q L Sbjct: 159 RLNHVGDWGTQFGML 173 Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 71/299 (23%), Positives = 119/299 (39%), Gaps = 52/299 (17%) Query: 322 RPLL--KSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378 +PL+ KSDG Y Y DLA + + E+ D +IYV + S + ++ VA Sbjct: 304 QPLIVQKSDGGYIYATTDLAALRYRIEQDQADWIIYVTDAGQSTHFAQVFQVAQRAGWIP 363 Query: 379 AQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDE--------------------- 416 +I ++ + DG K+ R+GD + L+ ++DE Sbjct: 364 NRIRLVHVPFGLVQGEDGK--KLKTRSGDTVRLQDLLDEAIDRARNDLVSRLEAEGRQET 421 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466 VG +V++ L + + F + K+ + N Y+ YAY R + I R Sbjct: 422 PEFIDHVAQVVGIGAVKYADLSQNRTSNYVFSYDKMLS-LQGNTAPYLIYAYVRVQGISR 480 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 + + DL P S + E L HL + V+ T P +L YL+ Sbjct: 481 KGQ-------IDLEQLTEQPTLSLQEEEEKLLARHLLQLEDVLAQVTEDLLPNRLCQYLF 533 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +L+ F+ + R +QA L RL L A + GL+++G++ M Sbjct: 534 ELSQKFNQFYD------RCPILQAEE-PLRNSRLGLAQLTARTLKLGLSLLGIQVLERM 585 >gi|160947527|ref|ZP_02094694.1| hypothetical protein PEPMIC_01461 [Parvimonas micra ATCC 33270] gi|158446661|gb|EDP23656.1| hypothetical protein PEPMIC_01461 [Parvimonas micra ATCC 33270] Length = 578 Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 136/567 (23%), Positives = 233/567 (41%), Gaps = 114/567 (20%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG--- 87 R +IE P + G S LS+ L P I+E +V RI ID DS+F K Sbjct: 25 RELIEIPPNPEMGDFSF-PCFKLSKILRKAPNIISEELVNRINID---DSIFSNVKNVGP 80 Query: 88 FINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 +IN ++ S + + ++ I +YG + + I++ S N P H+GH R ++ Sbjct: 81 YINFFVRNSEFSKNVIKEIFDKKEKYGSSQDNLDKTIVIDYSSTNIAKPFHIGHIRSTLI 140 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPG 203 G+ + ++ F GY ++ D G Q + + L+ ND ++ P Sbjct: 141 GNVIKNIYNFLGYNTVGVNHLGDYGTQFGKIIAAY------KLWGNDEEINADPINQLLK 194 Query: 204 VYL--KHVGK------ELADKYSSELLNFPEE-----KWLPIVKDYSVQAMMKIIRDDLK 250 +Y+ ++ K E A Y ++L N EE W KD S+ K+ D LK Sbjct: 195 LYVDFNNLCKTDEKMLETARDYFNKLENGDEESVRLWNWF---KDISLMEFQKVY-DKLK 250 Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310 + D +RG+ + ID++ ++ ++ K LL Sbjct: 251 V----------KFDSYRGEAYHSQ-FIDDVVKE--------------------LEDKNLL 279 Query: 311 FRSTMVG----DDVDRP---LLKSDGSYTYFAADLAY-FKCKYERGFDNMIYVMGSDHSG 362 S D D P +LKS+ S TY D+A K + F IYV+ + Sbjct: 280 VESDGCKIVNLDKYDLPPALILKSNSSSTYITRDIATALTRKKDYNFYKNIYVVATQQKL 339 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRD---GMPIKMSKRAGDFITLRHVVD---- 415 + ++L+AV + + A+ + + + +D G K+S R G+ I L V++ Sbjct: 340 HFQQLKAVLEEMGYEWAKDCIHVSFGMVSVKDNFLGTSAKLSTREGNVIFLNDVLEKSVE 399 Query: 416 ---------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFY 453 EVG +V F L+ + FD+ V + + P Y Sbjct: 400 KTLEIINERNSSLENKEEIAKEVGIGAVIFQELFNTRIKDYSFDWNNVLNFEGETGP--Y 457 Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNV-IPQESEF--DTSELQLIVHLAEYPRVIE 510 VQY+ AR SI + DF L N+ I + S + + EL LI + ++ ++ Sbjct: 458 VQYSAARANSILEKN-------DFYLKLDNIDISKVSNYKMNIDELSLIKSIYKFEDILL 510 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWS 537 ++ EP LA Y+ ++A +F+ ++ Sbjct: 511 DSAKKYEPSILARYITEVAKLFNKFYN 537 >gi|253742171|gb|EES99018.1| Arginyl-tRNA synthetase [Giardia intestinalis ATCC 50581] Length = 621 Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 138/632 (21%), Positives = 252/632 (39%), Gaps = 120/632 (18%) Query: 28 ILDRIVIERPRDCAHGHLSTNAAM-------------ILSRPLGLDPLTIAELI-----V 69 +L +I + +GH N+ M + S P L L E++ Sbjct: 36 VLTSPLITPTTNIKYGHYQLNSTMGIAKIIKDLHYTELPSNPAELSGLITQEILRVQDEY 95 Query: 70 ARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYG---RNLIGKGTKVNI 125 ++K P +++V IAG FINL L+P+YL I ++ + +G + + ++ + Sbjct: 96 TKVKGCPKPIEAVNIAG-CFINLMLTPTYLLSKCFDIYMA-VPFGSLPKPPVLPKKRIAV 153 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 +F S N MHVGH R ++GD+++ L + GY+V R ++ D G Q L Sbjct: 154 DFSSPNVAKSMHVGHLRSTIIGDSISRLYEYVGYDVHRINHVGDWGTQFGMLI------- 206 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELAD--KYSSELLNFPEEKWLPIVK--------- 234 YL + E+AD + + P + + K Sbjct: 207 ------------------TYLTDMHPEIADAAAHCRRVTMLPIDNLVAFYKKAKERFDTD 248 Query: 235 -DYSVQAMMKIIRDDLKALNIQ-----HDIF-ISEDDFHR-GDPSPIRDIIDNLARQGYV 286 D+ +A +++ L+ LN++ H I IS +F R D I+ ID Y Sbjct: 249 ADFQKRAYETVVK--LQHLNLEEFYLWHKICEISRHEFQRIYDRLDIK--IDEFGESYYK 304 Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVG-DDVDRPLL--KSDGSYTYFAADLA--YF 341 ++ + K + QL ++T++ + +D PL+ KSDG +TY D+A Y Sbjct: 305 FKLGTTVARLKR-----LHLTQLSDKATVIPVEGMDYPLIIVKSDGGFTYDTTDMAAIYH 359 Query: 342 KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401 + + R D +YV+ + S + + + A V + V L DG +K Sbjct: 360 RTQVLRA-DKCVYVVDAGQSSHFELVFGAAEKAGWITKGQAVHVPFGVVLGSDGKRLKT- 417 Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL-------------------LDFDFCKV 442 RAG+ + L ++DE ++S R + ++ E D ++ Sbjct: 418 -RAGETVKLEDLLDEAVAESTRLLEERNRDQEFSQEEVRQIVEAVGYGAVKYADLSSHRI 476 Query: 443 KEQS---------KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493 K+ K N Y+ Y++ R SI R+A +L P+++ S D Sbjct: 477 KDYKYDPKRMLNLKGNTAAYLLYSFTRISSICRKAGINREELYTTSLPKDL----SIGDP 532 Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553 SE+ L+V L + I P+++ ++Y +AS + + R + ++ + Sbjct: 533 SEINLLVALLKVHDTILFTLDDLCPHRICDWVYSVASAYTDFYEKCRV---IETSESGDT 589 Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L + +++G+ + M Sbjct: 590 VCNKSRLALCEMTRQSLRLAFHLLGIREIDRM 621 >gi|171685240|ref|XP_001907561.1| hypothetical protein [Podospora anserina S mat+] gi|170942581|emb|CAP68233.1| unnamed protein product [Podospora anserina S mat+] Length = 634 Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 127/562 (22%), Positives = 223/562 (39%), Gaps = 97/562 (17%) Query: 80 SVFIAGKGFINLYLSPSYLRK--ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMH 137 S F G +N L P+ L+K + G++ + K+ +EF S N P H Sbjct: 111 SFFFKGAPLVNSIL-PTILQKGKTFGTNPSLGLKDPKEPSAGRKKIIVEFSSPNIAKPFH 169 Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNN--- 192 GH R ++G L +L +G++VTR Y+ D G Q LAL+ F ++ ++AL + Sbjct: 170 AGHLRSTIIGGFLGNLYEGAGWDVTRINYLGDWGKQYGLLALA-FEKFGDEKALEQDPIN 228 Query: 193 ---------DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV-KDYSVQAMM 242 ++++ E K G+++ + ++ L + + +D AM Sbjct: 229 HLFQLYVRINTEMTEEKEQIAKRKEAGEDVTEAEANSLDEQARRYFKKMTDRDEKALAMW 288 Query: 243 KIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294 K RD LNI D + E D + DI L Sbjct: 289 KKFRDLSIVRYKQTYARLNIHFDEYSGESQVSEAD---MADIGKQL-------------- 331 Query: 295 KSKTTQKCDMDRKQLLFRSTMV----GDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-G 348 + K K D + QL+ S +V G +++PL+ K DG+ Y D++ ++ + Sbjct: 332 EEKKISKED-NGAQLIDFSELVPGKEGKRLEKPLVRKRDGTALYLTRDISELLARHAKYN 390 Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAA-----VSEKKAQINV--------------LLCELV 389 FD MIYV+ S ++K+L + +++K IN L +++ Sbjct: 391 FDKMIYVVASAQDLHLKQLFKIIELLGHKDIADKCQHINFGLVLGMSTRKGTVKFLDDIL 450 Query: 390 RLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-Q 445 R D M M K + + + V D +G SV + K F+ ++ + Sbjct: 451 RDVADKMHETMRKNEDKYNQVENPEAVADVLGISSVMVQDMTGKRINNYTFNMDQMTSFE 510 Query: 446 SKENPVFYVQYAYARCRSIFRQA---KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 P Y+QYA+AR SI R+A + DF L + + ++ L Sbjct: 511 GDTGP--YLQYAHARVCSIKRKAGLSDEEIASADFSLLT----------EAHAVNIVRLL 558 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 A++P V N EP + YL+ + + R + + + R+ L Sbjct: 559 AQWPDVFSNTLRTLEPTTVLAYLFKMTHALSSSYDVLR-------IMGSEPAVLKARMAL 611 Query: 563 VHAVASIINSGLNIIGVESPNE 584 A ++ +G+ ++G+ SP E Sbjct: 612 YEAAHIVLGNGMRLLGL-SPVE 632 >gi|170052266|ref|XP_001862144.1| arginyl-tRNA synthetase [Culex quinquefasciatus] gi|167873169|gb|EDS36552.1| arginyl-tRNA synthetase [Culex quinquefasciatus] Length = 557 Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 119/505 (23%), Positives = 202/505 (40%), Gaps = 94/505 (18%) Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 K +EF S N P H GH R ++G+ LA+L G++V R Y+ D G Q L L V Sbjct: 106 KTLVEFSSPNIAKPFHAGHLRSTIIGNFLANLYDHLGHDVVRLNYLGDWGTQFGYLKLGV 165 Query: 182 FWR---YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS---SELLN--FPEEKWLPIV 233 + + N L E Y EL D+ SEL N F E Sbjct: 166 DLKGLSREDIRRNPIESLYEAYVYAYGKAEDSPELQDRARQIFSELENGTFSELDTWSDF 225 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI--IDNLARQGYVYEGIL 291 + Y+V D+LK + + D +H ++DI + NL R+ V Sbjct: 226 RSYTV--------DELK--QVYERLGTRFDQYHWESQYGVKDISHVINLLREQKVL---- 271 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFD 350 TQ+ D ++++ VG+ + P++KSDG+ Y D+A ++ R FD Sbjct: 272 ------VTQE---DGRKVV----KVGNR-NVPIVKSDGTTLYLTRDVAALMDRFGRFRFD 317 Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 N YV+ + S + L ++A Q+N+ + + G + MS R G + L Sbjct: 318 NAFYVVDNSQSDHFSALMSIA-------QQLNLSYAASISHVKFGRVLGMSTRKGTVVFL 370 Query: 411 RHVVDE----------------------------VGSDSVRFMMLWRKNSELLDFDFCKV 442 + ++DE +G+ +V L ++ + DF + + Sbjct: 371 KDILDEAEAQMKQKQLNTKTTKSNALNNPKVATILGTTAVVVNDLKQRRTRDYDFSWDRA 430 Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF--DLFPRNVIPQESEFDTSELQLIV 500 QS + +QY + R S+ + A + P ++ +L P + L L+ Sbjct: 431 L-QSDGDTGIKLQYTHCRLSSLEKNAAEQ-PAIECKPELLP----------EPEALALVC 478 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 L ++ V+ A +E L YL+ L + + R L + +++ + RL Sbjct: 479 ELVKFEDVLAEAAERREACILVNYLFGLCN------ATSRALQTLHVMNEPSQERRLQRL 532 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 L A + G+ I+G+E EM Sbjct: 533 LLFGATRKTLRRGMEILGLEPLEEM 557 >gi|261379756|ref|ZP_05984329.1| arginine--tRNA ligase [Neisseria subflava NJ9703] gi|284797434|gb|EFC52781.1| arginine--tRNA ligase [Neisseria subflava NJ9703] Length = 637 Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 76/146 (52%), Gaps = 1/146 (0%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ HG N M ++ +P +A+ + + + ++S +AG GFINL Sbjct: 25 VVLQPTKNAEHGDFQINGVMGAAKKAKQNPRELAQKVAEVLADNAVIESAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L P +L + + + ++ +G K V I++ S N MHVGH R +++GD+++ Sbjct: 85 RLRPEFLAQNIQT-ALNDARFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSIS 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177 ++ F G V R+ ++ D G Q L Sbjct: 144 RVLEFMGNTVIRQNHVGDWGTQFGML 169 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 18/132 (13%) Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 N Y+QYAY R +S+FR+A ++D V+ + E QL L ++ V Sbjct: 519 NTAPYLQYAYTRVQSVFRKAG------EWDATAPTVLTE-----PLEKQLAAELLKFEDV 567 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 +++ P+ LA YLY +A++F + P L+ A RLQL Sbjct: 568 LQSVADTAYPHYLAAYLYQIATLFSRFYEAC---PILKSEGATRNS----RLQLAKLTGD 620 Query: 569 IINSGLNIIGVE 580 + GL ++G++ Sbjct: 621 TLKQGLELLGID 632 >gi|159900646|ref|YP_001546893.1| arginyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779] gi|159893685|gb|ABX06765.1| arginyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779] Length = 576 Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 121/578 (20%), Positives = 224/578 (38%), Gaps = 103/578 (17%) Query: 58 GLDPLTIAELIVARIKIDPDVDSVFIAGKG-FINLYLSP-SYLRKILSSIVVSGIEYGRN 115 G++P A+ + +K P+ + + G ++N L+P ++ + +L I EYGR+ Sbjct: 52 GINPAQFAQTLANALKFTPESLVLKASALGAYVNFSLNPVTFAQSVLHDISQRKAEYGRS 111 Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175 G+ V +++ S N M V H R ++G + ++ GY V R + D Q+ Sbjct: 112 TKGQNQAVVVDYSSPNIAKRMRVDHIRSTMIGQAIVNIYRALGYHVIRMNHWGDYDPQLG 171 Query: 176 TLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSELLNFPEE--KWLP 231 ++L+ +Q N +S L E + +LA ++S+L + K L Sbjct: 172 -ISLAAMQHFQHRNGNGESMLASLEQQTQQYHADDQVHDLAQAWASKLTKGEPQAIKLLQ 230 Query: 232 IVKDYSVQAMMKIIRDDLKALNIQH---------DIFISEDDFHR-----GDPSPIRDII 277 + D S+ A R A ++QH + I E ++ G + ++D++ Sbjct: 231 QLVDLSLTANQANYRRLGVAFDVQHCESFYAREAQVVIKEALHYQIAQLDGHVAVVKDLL 290 Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337 D QG +L L +SDGS Y D Sbjct: 291 DE---QGKALPTLL--------------------------------LNRSDGSSLYITRD 315 Query: 338 LAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV------- 389 +A K + E +IYV+ + ++ ++ + KA ++ + C ++ Sbjct: 316 IAAIKYREELYQPTKIIYVVKQAQELHFRQAFTISKTLGYTKADLSHVACGMILGPERRS 375 Query: 390 --------RLYRDGMPIKMSKRAGDFIT--------------LRHVVDEVGSDSVRFMML 427 +Y + + + RA I + + ++VG +V + L Sbjct: 376 PSGARFSTMIYLEPLLDEACTRAKALIKQKALESKIPFSSTEINEIAEQVGVGAVIYHNL 435 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487 + + D+ ++ N Y+QY +ARC SI R DF P+N Sbjct: 436 QHDPAHDVVVDWERMLA-FDGNSSTYLQYMHARCCSILR---------DFGRIPQNY-DG 484 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 ++E L+ LA P+VI +A P+ ++ +LY A F + Sbjct: 485 RVLTHSAEQALLKELARLPQVIVDAAERYAPFVVSDWLYATAKAFAVFYD------SCSV 538 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++A L R QLV A A + +GL ++ + +P M Sbjct: 539 LKAETLALRAARGQLVAATAQALRNGLGLLSIAAPERM 576 >gi|187453153|emb|CAQ34913.1| arginyl-tRNA synthetase [Canavalia ensiformis] Length = 595 Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 128/562 (22%), Positives = 228/562 (40%), Gaps = 86/562 (15%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGK 119 P + + IVA + ++S IAG GF+N+ LS ++ + L +++ GI+ + L K Sbjct: 73 PPALGQAIVANLPQSEMIESCSIAGPGFVNIVLSKKWIAQRLEMMLIDGIDTWAPRLPVK 132 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE-VTREYYINDAGAQINTLA 178 V ++F S N MHVGH R ++GDTLA ++ F+ E + R ++ D G Q L Sbjct: 133 --VVMVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFACVETLIRRNHLGDWGTQFGMLI 190 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 +F +Y N D+ E +G +L Y + + F + P K + Sbjct: 191 AHLF-----DMYPNPEDVNE--------TAIG-DLQAFYKASKVRFDND---PEFKLRAQ 233 Query: 239 QAMMKIIRDDLKALNIQHDIF-ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 Q+++ + D K I +S+ +F + + + + G + L PP + Sbjct: 234 QSVVLLQSGDKKYRKAWERICDVSKAEFEK----VYKRLGVRVEAMGESFFNDLIPPTLE 289 Query: 298 TTQKC----DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA--YFKCKYERGFDN 351 K D D +++F + G ++ +K DG Y YF++DLA +++ E+ + Sbjct: 290 KLDKLGLIEDSDGARVIF---VEGVNIPIIAVKRDGGYNYFSSDLASLWYRLNVEK-LEW 345 Query: 352 MIYVMGSDHSGYVKRL-EAVAAAVSEKKAQINVLLCELVR----LYRDGMPIKMSKRAGD 406 IYV + L +A A K + + C + L DG + R+ + Sbjct: 346 NIYVTDVGQWQHFDMLFKAFRRAGWLPKDENDFPKCTHIGFGLVLGEDGK--RFRSRSSE 403 Query: 407 FITLRHVVDEVGSDSVRFMML------W-----RKNSELLDFDFCKVKE----------- 444 + L ++DE ++ W K SE + + K + Sbjct: 404 TVRLVDLLDEAKRRCKSALLERDAAKDWSEEEIEKTSEAIGYGAVKYADLKINRLTNYTF 463 Query: 445 ------QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498 K N Y+ YA+AR SI R++ +L + N++ + E L Sbjct: 464 NFDQMLNDKGNTAVYLLYAHARICSIIRKSGKDIEELKKN---GNIVLNHED----ERAL 516 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 +HL ++P V + P L YLY+L +F + Q Sbjct: 517 GLHLIQFPEVFVESLANLLPNVLCEYLYNLTEIFTKKFYTN--------CQVIGSPEQTS 568 Query: 559 RLQLVHAVASIINSGLNIIGVE 580 RL L A A+++ ++G++ Sbjct: 569 RLLLCEATATVMRKCFYLLGID 590 >gi|171473734|gb|ACB47040.1| putative class Ic arginyl-tRNA synthetase [Micromonospora chersina] Length = 572 Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 134/599 (22%), Positives = 233/599 (38%), Gaps = 123/599 (20%) Query: 47 TNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIV 106 ++AA+ L+R LG P IA ++ R ++ + ++G GF+NL ++ L ++S++ Sbjct: 37 SDAALALARRLGRPPRAIATEVLERAELADLCSATEVSGPGFLNLTVADDALAGLVSALA 96 Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166 G V +++ + N MHVGH R V+GD A L+ + G+ V R + Sbjct: 97 AD-PRLGVPEAAAPETVVVDYSAPNVAKEMHVGHLRSTVIGDAAARLLEWLGHRVLRANH 155 Query: 167 INDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 + D G L L F++ +A ++ D E + + Sbjct: 156 LGDWGTPFGMLIEHLVDLGEAEAAQELSMGDLDSFYKAARAKFDAD----EAFRERARQR 211 Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 V + D + L W +V+ + + D L D+ ++E DFH Sbjct: 212 VVALQGGDATTLRL-------WRLLVEQS--ERYFLTVYDLL-------DVTLTERDFH- 254 Query: 268 GDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-P 323 G+ S + ++++L R G + +S C +F VG D + P Sbjct: 255 GESSYNDLLGPVVEDLDRLGLL--------RSSDGAAC-------VFPPGSVGRDGEPLP 299 Query: 324 LL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMG----------------------- 357 L+ KSDG Y Y A DLA + + G ++YV+G Sbjct: 300 LIVRKSDGGYGYPATDLAAIRHRTGTLGATRLLYVVGLPQRRHFEMVYAAAAQAGWLAPP 359 Query: 358 --SDHSGY-------VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 ++H G+ + L + A+ + + + L R+ P A + Sbjct: 360 ARAEHVGFGSILGPDGRMLRSRASGSVKLVGLLEEAVARATALARERNPELGEAEAAE-- 417 Query: 409 TLRHVVDEVGSDSVRFMMLW--RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466 V VG +V++ L R +LD++ + N Y+QYA++R RSIFR Sbjct: 418 ----VGRAVGIGAVKYADLSSDRHKDYVLDWERMLSLDG---NSAPYLQYAHSRIRSIFR 470 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 +A + R P S D +E L L + V+ E + L L Sbjct: 471 RAG---------VAARPEAPV-SLVDPAERALAFELVGFGAVVGAVAENLEFHHLTACLS 520 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA+ F + P LR + + RL L A ++ GL+++G+ +P + Sbjct: 521 RLAAAFSAFYER---CPVLR----ADEPVRESRLVLCDLTARVLRQGLHLLGIRTPERL 572 >gi|194899366|ref|XP_001979231.1| GG14252 [Drosophila erecta] gi|190650934|gb|EDV48189.1| GG14252 [Drosophila erecta] Length = 572 Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 117/507 (23%), Positives = 199/507 (39%), Gaps = 97/507 (19%) Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +E+ S N P HVGH R ++G+ LA+L GY TR Y+ D G Q LAL V Sbjct: 117 VEYSSPNIAKPFHVGHLRSTIIGNVLANLHQHLGYRTTRLNYLGDWGTQFGLLALGV--- 173 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE-------LLNFPEE-------KWL 230 Q L +D ++ +Y +V A + E L EE K Sbjct: 174 --QLLNVSDKEMQLSPIETLYKCYVAANKAAEQRPEIAQQARHLFAALEEGTDTTMTKQW 231 Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290 + Y+++ + K+ L + D + E + + I+ ++D L G+ Sbjct: 232 QQYRKYTIEDLSKVY----NRLGVHFDSYEWESQYSQ---QHIQGVLDKLRS-----AGL 279 Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GF 349 L P R +V D P++KSDGS Y A D+A + R F Sbjct: 280 LQPEHDG--------------REVVVVDGRRIPVIKSDGSTLYLARDIAALLERLSRFQF 325 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 ++YV+ + + + L +AA++++ L E ++ + G MS R G + Sbjct: 326 SRLLYVVDNGQADHFNALFKTSAALNDR------LSLEQLQHVKFGRIHGMSTRQGKAVF 379 Query: 410 LRHVVDE---VGSDSVRFMMLWRKNSELLDFDFCKV-----------KEQSKENPVFY-- 453 L+ V+DE + + R+N L D C + K++ + + F Sbjct: 380 LKDVLDEARDIMREKRSCSPTTRQNYNLDDEHVCDILGVSAVLVNVLKQRRQRDHEFSWQ 439 Query: 454 ------------VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS---ELQL 498 +QY + R S+ + F ++D D ++ P F T L L Sbjct: 440 QALQVNGDTGIKLQYTHCRLHSLLQN----FSEVDLD----DIKPDWKHFATEPADALDL 491 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 + LA + + I + E L YL+ L + + R RL Q + + + Sbjct: 492 LYALARFDQSIWQSKEQLEACVLVNYLFGLCN------AASRALKRLPVKQESCLQKQLQ 545 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 RL L HA + G+ ++G+ ++M Sbjct: 546 RLLLFHAAKRTLRQGMQLLGLRPLDQM 572 >gi|262196660|ref|YP_003267869.1| arginyl-tRNA synthetase [Haliangium ochraceum DSM 14365] gi|262080007|gb|ACY15976.1| arginyl-tRNA synthetase [Haliangium ochraceum DSM 14365] Length = 580 Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 130/574 (22%), Positives = 231/574 (40%), Gaps = 87/574 (15%) Query: 54 SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL--SSIVVSGIE 111 ++ LG P +A + R + V G F+N + + L +++ G Sbjct: 52 AKALGQPPPKLAAQVAERFAPGEYLSEVKATGP-FVNFRANRASALHFLRDATLAADGPA 110 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 + G G V I++ S N + + H R V+G L +L +GY V ++ D G Sbjct: 111 LIPSSPGAGKTVCIDYSSPNISKHLAYHHIRSTVIGHALVNLHRAAGYRVVGINHLGDWG 170 Query: 172 AQINTL-ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230 L A W + L + + +Y++ KE+AD + L +W Sbjct: 171 TTHGMLLAAHARWGAPEPLTVDGLN-------ALYVR-FRKEMADDPT---LEEEGRRWF 219 Query: 231 PIVKDYSVQAMMKIIR-DDLKALNIQHDIFISEDDFH--RGDPS---PIRDIIDNLARQG 284 ++D +A R ++ +H I +F RG+ + I ++ L +G Sbjct: 220 KKLEDGDAEARALWQRFREVSWAEFEHVYRILGIEFEDVRGESAYEDAIAGVLAMLEERG 279 Query: 285 Y--VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342 V EG L P D LL R K DG+ Y DLA Sbjct: 280 LPTVSEGALVVPLE------DAGMPPLLLR-------------KQDGATLYGTRDLAAAI 320 Query: 343 CKYER-GFDNMIYVMGSDHSGYVKRL-EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400 +++ F +YV+ S + ++L E + A + + + +VR+ K Sbjct: 321 YRHDTYDFARSLYVVDRGQSLHFRQLFEVLRRAGCDWAERCEHVPFGVVRVGGK----KT 376 Query: 401 SKRAGDFITLRHVVDE---------------------------VGSDSVRFMMLWRKNSE 433 R G+ + L+ V+ E VG +V F L + + Sbjct: 377 GTRTGNVVLLKEVLAEAEQRAADVVRENNPEMTGEAAAETARMVGVGAVVFANLASQREK 436 Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD--IFPDLDFDLFPRNVIPQESEF 491 +DF + +V S ++ YVQYA+ARC SI R+A++ + P + DL + + E+E+ Sbjct: 437 DVDFAWEQVLSVSGDSGP-YVQYAHARCASILRKAEERGLTPGAEVDL---SALSHETEW 492 Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551 L L + + A EP+ L+ YL DL + F ++ G ++ LR + + Sbjct: 493 -----ALARKLLDLGETVHRAAENNEPHLLSRYLLDLCAAFSRWYTAGNQDKSLRAL-VD 546 Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + R+ LV ++ GL ++G+E+P++M Sbjct: 547 DDAVARARITLVAIAGRVLARGLGLLGIEAPSDM 580 >gi|242009305|ref|XP_002425430.1| Arginyl-tRNA synthetase, putative [Pediculus humanus corporis] gi|212509247|gb|EEB12692.1| Arginyl-tRNA synthetase, putative [Pediculus humanus corporis] Length = 575 Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 107/450 (23%), Positives = 186/450 (41%), Gaps = 58/450 (12%) Query: 32 IVIERPRDCAHGHLSTNAAM-----ILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK 86 +VI + G N+AM + S +P +AE I + + ++ + +AG Sbjct: 84 VVIAASNNSKFGDYQCNSAMPIVQLLKSEGKKSNPREVAEKIKSCVSPHNLIEKLEVAGA 143 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GFIN+ LS + + L I+ +G+ + + +V ++F S N MHVGH R ++ Sbjct: 144 GFINVTLSRTEGQNCLQFILKNGVLPPK--VNAKCRVIVDFSSPNIAKEMHVGHLRSTII 201 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206 GD++++L+ F G++V R ++ D G Q L + E +P Sbjct: 202 GDSISNLLEFLGHDVVRVNHVGDWGTQFGMLIAHL----------------EDKFPDYLT 245 Query: 207 KHVG-KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 K ++L Y F E++ V + D LKA N+ D +S +F Sbjct: 246 KSPPIQDLQAFYKESKKRFDEDEAFKKRAYNCVVQLQSHHPDYLKAWNLICD--VSRKEF 303 Query: 266 HRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF----RSTMVGDDV 320 + I +D + +G E K + +++ K L R M GD Sbjct: 304 QK-----IYQRLDIRITEKG---ESFYQTRMEKLVK--ELEAKNFLVEDEGRKIMWGDSS 353 Query: 321 DRP--LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 P ++KSDG +TY +DLA K + E D +IYV S S + L+ A Sbjct: 354 SIPFTIVKSDGGFTYDTSDLACIKYRIEEEKADWIIYVTDSGQSTHFDVLQKCA------ 407 Query: 378 KAQINVLLCELVRLYRDGMPI-------KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430 + +L E VR+ G + K R+G+ + L ++DE S+ + ++ Sbjct: 408 -IKCGILNPEKVRIDFVGFGVVLGEDKKKFKTRSGETVRLVDLMDEGLKRSLEKLKEKKR 466 Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYAR 460 + L + K +E + Y ++ R Sbjct: 467 DEVLTPEELKKAQESVAYGCIKYADLSHNR 496 >gi|321261407|ref|XP_003195423.1| arginine-tRNA ligase [Cryptococcus gattii WM276] gi|317461896|gb|ADV23636.1| Arginine-tRNA ligase, putative [Cryptococcus gattii WM276] Length = 622 Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 117/487 (24%), Positives = 195/487 (40%), Gaps = 108/487 (22%) Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169 + YG G G +V ++F S N P H GH R ++G + +L +G+ VTR Y+ D Sbjct: 142 LAYGTTTEGAGKRVVVDFSSPNIAKPFHAGHLRSTIIGAVICNLHEANGWNVTRLNYLGD 201 Query: 170 AGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLK--HVGKELADKYSS----- 219 G Q L++ F R Y N+ +L P + VY+K V E K+ + Sbjct: 202 WGTQYGLLSVG-FDR-----YGNEEELVKDPIHHLFQVYVKINSVRDEQKKKFEAGEIIP 255 Query: 220 --ELLNFPEEKWLPIVKDYSVQAMMKIIR-DDL---------KALNIQHDIFISEDDFHR 267 E ++ +K ++D +A+ + R DL K LN+ D++ Sbjct: 256 DEENIHLLAKKVFKDMEDGEPKAIAQWARFRDLSIEKLKGTYKKLNVHFDVYW------- 308 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-K 326 G+ + I+ R V E L C+ DR LL T +D+ ++ K Sbjct: 309 GESQVSEESIERAVR--IVQEKNLT---------CE-DRGALLVDLTKF--KMDKAIVRK 354 Query: 327 SDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 DG+ Y DL KY++ FD IYV+ + + + +L + E A Sbjct: 355 GDGTSIYLTRDLGGAYDKYQKYKFDKHIYVVQAAQTLHFNQLFKTLELMGEPYAD----K 410 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------------V 417 ELV G+ MS R G+ + L ++ E + Sbjct: 411 LELVTF---GLVKGMSTRKGNVVFLEDIIAEATDVMHEQMKSNEIKYAQVEDPEGTSAII 467 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 G+ +V+ + + DFD + + P ++QY++ R S+ R+ Sbjct: 468 GTTAVKIQDMAGRRINDYDFDIKRCTSFEGDFGP--FIQYSHVRLCSVQRKN-------- 517 Query: 477 FDLFPRNVIPQE-SEFDTSEL------QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 P ++PQ +E D S L ++I+HLA YP + NA + EP +L + + L Sbjct: 518 ----PNVLVPQSINEIDLSILDEPKVNEIIMHLALYPTHVRNAFLQSEPSQLVTWCFKLG 573 Query: 530 SVFHGHW 536 + W Sbjct: 574 HLVGAAW 580 >gi|327312637|ref|YP_004328074.1| arginine--tRNA ligase [Prevotella denticola F0289] gi|326946176|gb|AEA22061.1| arginine--tRNA ligase [Prevotella denticola F0289] Length = 606 Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 128/582 (21%), Positives = 230/582 (39%), Gaps = 138/582 (23%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 KGF+NL ++ + +L+ I + + V IE+ S N P+H+GH R + Sbjct: 81 KGFLNLVIAQAAWTGLLNDINADEKFGEKRVTADSPLVMIEYSSPNTNKPLHLGHVRNNL 140 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRY----QQALYNNDSDLPEGY 200 +G +LA +M +G +V + +ND G I L+ W ++A D + + Y Sbjct: 141 LGWSLAQIMEANGNKVVKTNIVNDRGIHICKSMLAWLKWGNGITPEKAGKKGDHLIGDFY 200 Query: 201 YPGVYLKHVGKE---LADKYSSELL-----NFPEEKWLPIVK------------DYSVQA 240 ++ KH +E L ++Y E + E+ P++K D V A Sbjct: 201 V--LFDKHFKEECRQLQEQYEKEGMAPDAAKEKAEQEAPLIKEAHEMLVKWEQGDSEVHA 258 Query: 241 MMKIIR--------DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 + + + + KAL + D E + + L + V EG+ Sbjct: 259 LWEKMNSWVYAGFDETYKALGVSFDKIYYESNTY-------------LVGKKKVEEGL-- 303 Query: 293 PPKSKTTQKCDMDRKQLLFR-------STMVGDDVDRPLL-KSDGSYTYFAADLAYFKCK 344 K L FR + + + +D+ LL + DG+ Y D+ + + Sbjct: 304 -------------EKGLFFRKDDNSVWADLTKEGLDQKLLLRKDGTSVYMTQDIGTAEMR 350 Query: 345 Y-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403 + + D MIYV+G++ + + + L + + K + V + +G KM R Sbjct: 351 FNDFPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKDLVHFSYGMVELPNG---KMKSR 407 Query: 404 AGDFI----------------------TLRHVVDE--------VGSDSVRFMML---WRK 430 G + L + +E VG ++++ +L RK Sbjct: 408 EGTVVDADDLVASMIENAKKLSEDKVNKLEGITEEEKNEIARIVGMGALKYFILKVDARK 467 Query: 431 N-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ--AKDIFPDLDFDLFPRN 483 N E +DF+ N ++QY YAR RSI R+ A+DI L P + Sbjct: 468 NMLFNPEESIDFN---------GNTGPFIQYTYARIRSILRKAAAQDI-------LLPAS 511 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + ++ + E++LI L ++ + A I P +A Y Y+L F+ + Sbjct: 512 -LADDAPLNEKEIELIQKLNDFGTAVAQAGIDYSPSGIANYCYELTKEFNQFYHD----- 565 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A+ + RL L VA +I +G+ ++G+E P M Sbjct: 566 -YSILSADTEAKKITRLVLARNVAKVIRNGMALLGIEVPERM 606 >gi|90075828|dbj|BAE87594.1| unnamed protein product [Macaca fascicularis] Length = 631 Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 132/591 (22%), Positives = 240/591 (40%), Gaps = 118/591 (19%) Query: 43 GHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM +S+ L ++P IAE I + + ++ V IAG GFIN++L + Sbjct: 111 GDYQCNSAMGISQMLKTKEQKVNPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDF 170 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA-- 155 + + L+S++V+G++ +G+ KV ++F S N MHVG G L+A Sbjct: 171 VSEQLTSLLVNGVQLP--AVGENKKVIVDFSSPNIAKEMHVGDW-----GTQFGMLIAHL 223 Query: 156 ---FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 F Y +T I D L F++ + ++ + + + Y V L GK Sbjct: 224 QDKFPDY-LTVSPPIGD---------LQAFYKESKKRFDTEEEFKKRAYQCVVLLQ-GK- 271 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 N K ++ D S Q KI AL++ + + F++ Sbjct: 272 ----------NPDITKAWKLICDVSRQEFNKI----YDALDVS--LIERGESFYQ---DR 312 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + DI+ +G+V + D D ++++F + G + ++KSDG YT Sbjct: 313 MNDIVQEFEDRGFV--------------QVD-DGRKIVF---VPGCSIPLTIVKSDGGYT 354 Query: 333 YFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 Y +DLA K + E D +IYV+ S S + + + A A + ++ R+ Sbjct: 355 YDTSDLAAIKQRLSEEKADMIIYVVDSGQSVHFQTIFAAAQMIGWYDPKV-------TRV 407 Query: 392 YRDGMPI-------KMSKRAGDFITLRHVVDE---------------------------- 416 + G + K RAG+ + L ++ E Sbjct: 408 FHAGFGVVLGEDKKKFKTRAGETVRLMDLMGEGLKRSMDKLKEKERDKVLTAEELNAAQT 467 Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 + +++ L F F K+ + + N Y+ YA+ R RSI R A ++ Sbjct: 468 SIAYGCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NI 521 Query: 476 DFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 D ++ + + D E +L + +P +++ + L Y+Y+LA+ F Sbjct: 522 DEEMLQKAARETKILLDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATTFTE 581 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + R K+ M R+ L AVA+++ G +I+G++ M Sbjct: 582 FYDSCYCVEKDRQT-GKILKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 631 >gi|255994895|ref|ZP_05428030.1| arginine--tRNA ligase [Eubacterium saphenum ATCC 49989] gi|255993608|gb|EEU03697.1| arginine--tRNA ligase [Eubacterium saphenum ATCC 49989] Length = 576 Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 135/606 (22%), Positives = 240/606 (39%), Gaps = 115/606 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-------KIDPDVDSVFIAG 85 +IE P D A+G + L++ P IAE + ++ KI+P Sbjct: 33 IIETPNDDANGDYAL-PCFTLAKKFRKSPNLIAEDLAEKLFKADFIEKIEP--------V 83 Query: 86 KGFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 G++N YL S+++ L ++ YG +L V +EF S N P H+GH R Sbjct: 84 SGYLNFYLKKESFIKDTLDEVISKLSAYG-HLSSNDKTVVVEFSSPNIAKPFHIGHIRST 142 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE------ 198 ++G+ LA++ GY R +I D G Q + +S + R + N+ D+ Sbjct: 143 LIGNALANISKALGYNTVRVNHIGDYGTQFGKI-ISAYKR-----WGNEEDVDREPVKTL 196 Query: 199 -GYYPGVYLKHVGKELADKYSSELLNFPEE---------KWLPIVKDYSVQAMMKIIRDD 248 YY + + E ++ + EE KW +D S++ K+ D Sbjct: 197 LSYYTRFHAEAETDETLEEEARMHFKNLEEGREEETKLWKWF---RDVSLKEFGKVY--D 251 Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308 L L I+ D F E + P+ +ID + E + KS+ ++ + Sbjct: 252 L--LGIKFDSFDGESFYTDKMPA----VIDEM-------ESMNLLEKSRGATIVNLQKYN 298 Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRL 367 + D + KSDGS Y D+A ++E+ F IYV+G+ + K+L Sbjct: 299 M----------TDVLVKKSDGSSLYITRDIAAAIYRHEKYNFYKNIYVVGAQQDLHFKQL 348 Query: 368 EAV-----------------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404 + +S + + V L +++ + + + R Sbjct: 349 VKILELMNKPFAKDCVHVPFGMVSIEGGTLSTRNGTV-VFLEDVLSKAIEKTLVTLEDRN 407 Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF-YVQYAYARCRS 463 + V +VG +V F L+ N+ + D+ F + S + YVQY AR S Sbjct: 408 FSSDKRQEVARQVGVGAVVFQELY--NTRIKDYQFSWDRALSFDGETGPYVQYTCARANS 465 Query: 464 IFRQAKD---IFPDL-DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 + +A D D+ D D+ + I +S + L+ + + + A EP Sbjct: 466 VLSKASDEGIAIKDIEDVDI---SYITNKSAY-----ALVRLIFNFSDKLTEAFERYEPS 517 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 +A Y D+ F+ + + +N + +L LV A ++ + L I+G+ Sbjct: 518 IVARYAMDVCKAFNRFYHD-------EHILTDNEEERDAKLLLVKASVILLKNVLKILGM 570 Query: 580 ESPNEM 585 ESP++M Sbjct: 571 ESPDKM 576 >gi|66823143|ref|XP_644926.1| arginyl-tRNA synthetase [Dictyostelium discoideum AX4] gi|74857747|sp|Q558Z0|SYRC_DICDI RecName: Full=Probable arginyl-tRNA synthetase, cytoplasmic; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|60473123|gb|EAL71071.1| arginyl-tRNA synthetase [Dictyostelium discoideum AX4] Length = 589 Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 122/528 (23%), Positives = 213/528 (40%), Gaps = 80/528 (15%) Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 +++IL ++ +YG GKG KV +EF S N P H GH R ++G+ + +L Sbjct: 90 VQEILKEVINQKEKYGMTEQGKGKKVIVEFSSPNIAKPFHAGHLRSTIIGNFMVNLFNEL 149 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLKHVGKELA 214 YE Y+ D G Q LA+ Y ++ +L P + VY++ G+ Sbjct: 150 AYETVSMNYLGDWGKQYGLLAVGF------EKYGSEEELLADPIKHLYNVYVQINGEAEK 203 Query: 215 DKY---------SSELLNFPEEKWLPIVKDYSVQAMMKIIRD-DLKALNIQHDIFISEDD 264 ++ ++ + + P + D + +A K + D D +AL I Sbjct: 204 EEEAKKKYAEEIAAGVEPTAPLQTTPTIHD-TARAYFKRMEDGDAEALAIWK-------R 255 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD-DVDRP 323 F +DI + L + +Y G + T + + K LL S D+ +P Sbjct: 256 FRDLSIVKYKDIYNRLNVKFDIYAGESLVTEGMTIEFKKLQDKNLLEDSQGAKVIDLSKP 315 Query: 324 -------LLKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRL-------- 367 + K+DG+ Y D+ A K GFD M YV+ S + ++L Sbjct: 316 NKLGKVLVQKTDGTTLYITRDIAAAVDRKNNIGFDKMYYVVASQQDFHFRQLFDILGKMD 375 Query: 368 -----------EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL---RHV 413 + +S +K + V L +++ + M M + F + V Sbjct: 376 YQWQKDLTHINYGMVKGMSTRKGTV-VFLEDILNKTQKKMLKIMKQNEQKFAEIEDPEKV 434 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 D VG +V K ++ DF++ + +K P Y+QYA+AR S+ R++ Sbjct: 435 ADIVGLSAVVIQDFNAKRNKDYDFNWDRMLKSDGDTGP--YLQYAHARLCSLERKS---- 488 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA-SV 531 F+ P + SE + L + + YP +I+ EP L YL++LA +V Sbjct: 489 ---GFEFNPNANLSLLSEPEA--FNLAITIGRYPEIIQLTHNQLEPSTLVGYLFELAHAV 543 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 H ++ +++ + + R L A I+ SGL I+G+ Sbjct: 544 SSAH--------QVLWIKDREKDVAEARFVLYWAAKVILGSGLRILGL 583 >gi|281203852|gb|EFA78048.1| arginyl-tRNA synthetase [Polysphondylium pallidum PN500] Length = 567 Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 120/508 (23%), Positives = 210/508 (41%), Gaps = 82/508 (16%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIG 118 +P +A A+ ++ + V +AG +IN ++ + L + IL ++ +G +YG G Sbjct: 53 NPAQLATEYAAKFVLNDLIKEVTVAGT-YINFKINRTILTESILKEVLAAGDKYGCTKQG 111 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 +G + IEF S N P H GH R ++G+ L ++ GY V Y+ D G Q LA Sbjct: 112 EGKTIVIEFSSPNIAKPFHAGHLRSTIIGNFLVNVYRSLGYTVQSINYLGDWGKQYGLLA 171 Query: 179 LSVFWRY--QQALYNNDSDLPEGYYPGVYLK-----HVGKELADK---YSSELLNFPEE- 227 + + R+ +QAL + P + VY+K E+ D+ Y ++ + E Sbjct: 172 IG-YDRFGSEQALLED----PIKHLFDVYVKINNTAETEPEIHDQARAYFKDMEDGNENA 226 Query: 228 -KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286 K +D S++ +I LN+Q D + E G S + L + G V Sbjct: 227 LKLWSKFRDLSIEKYKEI----YGRLNVQFDEYSGESKMCDGMVSA----YEKLDKLGLV 278 Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKY 345 + SK + D+ + D+ + L+ K+DGS Y D+A + Sbjct: 279 ED-------SKGAKIIDL---------STAKPDLGKVLVKKTDGSSLYITRDIAAASIRK 322 Query: 346 ER-GFDNMIYVMGSDHSGYVKRL-------------------EAVAAAVSEKKAQINVLL 385 E+ F+ MIYV+ S + ++L + +S +K + V L Sbjct: 323 EQYNFEKMIYVVASQQELHFRQLFKILERMQYPWSKELTHIGYGLVKGMSTRKGTV-VFL 381 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 E++ + M M K F + + V D V +V K ++ DF++ ++ Sbjct: 382 EEILNESKSIMLETMKKNEQKFAEIENPDEVADIVAVSAVIIQDFSAKRNKDYDFNWERM 441 Query: 443 KE-QSKENPVFYVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500 + P Y+QYA+AR SI R+ + P + L + L Sbjct: 442 LSFEGDTGP--YLQYAHARLCSIERKTGVSLNPSANLSLLVEPIA----------YNLAT 489 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDL 528 + YP +++ A EP + YL++L Sbjct: 490 IIQRYPEIVQIAFNNNEPNTIVTYLFEL 517 >gi|195457058|ref|XP_002075407.1| GK15297 [Drosophila willistoni] gi|194171492|gb|EDW86393.1| GK15297 [Drosophila willistoni] Length = 649 Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 115/491 (23%), Positives = 207/491 (42%), Gaps = 103/491 (20%) Query: 43 GHLSTNAAMILSRPL-----GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N AM L++ L G P +A ++ + P + + +AG GFIN++L+ Y Sbjct: 123 GDYQCNNAMALAKKLKDIGIGKSPRDVATELINSCPVSPRIGKLEVAGPGFINIFLNKDY 182 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + ++ ++ +G++ + + K +V ++F S N MHVGH R ++G+++ L+ F Sbjct: 183 GVRAITDLLRNGVKPPK--VPK-KRVLVDFSSPNIAKQMHVGHLRSTIIGESICRLLEFL 239 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217 ++V R ++ D G Q L + R+ L N+S P G Y KE ++ Sbjct: 240 QHDVIRINHLGDWGTQFGMLIAHLEDRFPNFL--NESP-PIGDLQAFY-----KESKKRF 291 Query: 218 SSELLNFPEEKWLPIV--------KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 + + F + + +V + Q + + R + K + + +I + E RG+ Sbjct: 292 DEDEV-FKKRAYNAVVALQGGDPNSIKAWQLICDVSRKEFKTIYDRLEINVKE----RGE 346 Query: 270 P---SPIRDIIDNLARQGY--VYEG--ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322 S + ++D L +Q V +G I+ P +SKT + Sbjct: 347 SFYQSRMLTVVDFLRKQNMLEVDDGREIMWPDESKT--------------------GIPL 386 Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVA--AAVSEKK- 378 ++KSDG +TY +D+A + + E D ++YV+ S S + + A + + K Sbjct: 387 TIVKSDGGFTYDTSDMAAIRHRIEEELCDWLVYVVDSGQSTHFATIFKAAKRCGIFQPKV 446 Query: 379 -----AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-- 431 Q V+L E DG K R+GD + L ++DE S+ + ++ Sbjct: 447 HRADHVQFGVVLGE------DGK--KFKTRSGDTVKLADLLDEGMKRSLEQLRSRGRDQV 498 Query: 432 ---SELLD------------------------FDFCKVKEQSKENPVFYVQYAYARCRSI 464 ELLD F F K+ + + N Y+ Y Y R SI Sbjct: 499 LTPQELLDAQEAVAYGCIKYTDLCHNRISDYVFSFDKMLD-DRGNTAVYLLYTYTRICSI 557 Query: 465 FRQAKDIFPDL 475 R + + F +L Sbjct: 558 ARNSGEDFSNL 568 >gi|253578270|ref|ZP_04855542.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850588|gb|EES78546.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 588 Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 120/612 (19%), Positives = 240/612 (39%), Gaps = 112/612 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 V RP C N AM ++ P IA+ +VA +K + GFINL Sbjct: 30 VSNRPDLC---EFQCNGAMAGAKAYKKAPFMIADDVVAYLKDSQVFSMAEVVKPGFINLK 86 Query: 93 LSPSYLRKILSSIV------VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 + +L L + VS + + +I I++ N P+HVGH R A++ Sbjct: 87 VKGEFLADYLKEMAADEKLSVSAAKEPKTII-------IDYGGPNVAKPLHVGHLRSAII 139 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP---- 202 G+++ + F G++V + ++ D G Q+ + + R + +Y +DS G YP Sbjct: 140 GESIKRIGRFVGHKVIGDVHLGDWGLQMGLIITELKHRKPELVYFDDS--YTGEYPEEAP 197 Query: 203 -------GVYLKHVGKELADKY-------SSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248 +Y GK D+ ++ LL + ++ + +M + D Sbjct: 198 FTISELEEIYPCASGKSKEDEAYRNEALEATHLLQQGKPGYMAL-----WNHIMNVSVTD 252 Query: 249 LK----ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 LK LN+ D++ E D P +++ + +G+ Y + Sbjct: 253 LKRNYDKLNVSFDLWKKESDAQPYIPG----MVEEMKEKGFAY----------------V 292 Query: 305 DRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSD 359 D+ L+ D + P LLKSDG+ Y DLA + + F D ++YV+ Sbjct: 293 DQGALVVDVKEENDTKEIPPCMLLKSDGASLYTTTDLATI-VERMKLFDPDEILYVVDKR 351 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVG 418 + ++ A K + + +DG P K R G + L ++ ++ Sbjct: 352 QELHFIQVFRCARKTGLVKDDTKLSFLGFGTMNGKDGKPFKT--REGGVMRLETLIKDIN 409 Query: 419 SDSVRFMMLWR--------KNSELLDFDFCK---VKEQSKENPVF--------------Y 453 + ++ R + +E++ K + Q+ ++ +F Y Sbjct: 410 EEMFTKIVENRSVKDKDAKETAEIVGLSAIKYGDLSNQATKDYIFDIDRFTSFEGNTGPY 469 Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513 + Y R +SI + F + +L ++ + S+ L++ L + +ENA Sbjct: 470 ILYTIVRIKSILNR----FAEEGGNLEAGTIL---DPVNDSQKNLMLQLTGFGATVENAF 522 Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573 + P+K+ Y+Y++++ F+ + + + N +QL+ ++ + Sbjct: 523 EEKAPHKICAYIYEVSNAFNSFYHE------TKILSEENEAQKASFIQLLKLTKKVLETC 576 Query: 574 LNIIGVESPNEM 585 ++++G +P+ M Sbjct: 577 IDLLGFSAPDRM 588 >gi|313149279|ref|ZP_07811472.1| arginyl-tRNA synthetase [Bacteroides fragilis 3_1_12] gi|313138046|gb|EFR55406.1| arginyl-tRNA synthetase [Bacteroides fragilis 3_1_12] Length = 599 Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 132/605 (21%), Positives = 253/605 (41%), Gaps = 84/605 (13%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 ++ +++ + GHL+ L R P A+ I +K + + F KGF+N Sbjct: 29 QVQLQKTKKEFEGHLTLVVFPFL-RMSKKGPEQTAQEIGEYLKANEPAVAAFNVIKGFLN 87 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDT 149 L ++ + ++L+ I +YG + V IE+ S N P+H+GH R ++G+ Sbjct: 88 LTIASAAWIELLNEIHADA-QYGIVSADENAPLVMIEYSSPNTNKPLHLGHVRNNLLGNA 146 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE----------G 199 LA+++ +G +V + +ND G I L+ W+ Y N + PE G Sbjct: 147 LANIVMANGNKVVKTNIVNDRGIHICKSMLA--WQK----YGN-GETPESSGKKGDHLVG 199 Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD--LKALNIQHD 257 Y + KH E+A+ + E P++ + + + ++K D ++AL + Sbjct: 200 DYYVAFDKHYKAEVAELMEKGMTKEEAEAASPLMNE-AREMLVKWEAGDPEVRALWQMMN 258 Query: 258 IFISE--DDFHRGDPSPIRDIIDNLARQGYVY-EGILPPPKSKTTQKCDMDRKQLLFR-- 312 ++ E D+ +R + D + + Y EG K K + + K F+ Sbjct: 259 NWVYEGFDETYR----KMGVGFDKIYYESNTYLEG-----KEKVMEGLE---KGFFFKKE 306 Query: 313 -----STMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVK 365 + + + +D + LL+ DG+ Y D+ K ++ + + MIYV+G++ + + + Sbjct: 307 DGSVWADLTAEGLDHKLLLRGDGTSVYMTQDIGTAKLRFADYPINKMIYVVGNEQNYHFQ 366 Query: 366 RLEAV--AAAVSEKKAQIN-----VLLCELVRLYRDGMPIKMSKRAGDFI-TLRHVVDEV 417 L + K+ ++ V L E R+G + + I T + E+ Sbjct: 367 VLSILLDKLGFEWGKSLVHFSYGMVELPEGKMKSREGTVVDADDLMAEMIATAKETSQEL 426 Query: 418 GS----------DSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVF------YVQYAYAR 460 G D R + L +L D K + KE+ F ++QY YAR Sbjct: 427 GKLDGLTQEEADDIARIVGLGALKYFILKVDARKNMTFNPKESIDFNGNTGPFIQYTYAR 486 Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520 +S+ R+A + + V+P E E LI +A++ V+ A P Sbjct: 487 IQSVLRKAAEA------GIVIPQVLPANIELSEKEEGLIQMVADFAAVVRQAGEDYSPSG 540 Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 +A Y+YDL ++ + ++ N + + R+ L +A ++ G+ ++G+E Sbjct: 541 IANYVYDLVKEYNQFYHD------FSILREENEDVKLFRVALSANIAKVVRLGMGLLGIE 594 Query: 581 SPNEM 585 P+ M Sbjct: 595 VPDRM 599 >gi|300706233|ref|XP_002995404.1| hypothetical protein NCER_101716 [Nosema ceranae BRL01] gi|239604486|gb|EEQ81733.1| hypothetical protein NCER_101716 [Nosema ceranae BRL01] Length = 561 Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 119/530 (22%), Positives = 214/530 (40%), Gaps = 84/530 (15%) Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 N+ L P Y +IL++I+ G ++GRN IG G V I++ S N H+GH R ++G+ Sbjct: 82 NINLIP-YSYEILTTILEKGEDFGRNNIGNGETVVIDYSSPNIAKIFHMGHFRTTILGNF 140 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 + + AF GY+ Y+ D G Q + L ++N +L P YL +V Sbjct: 141 VKKIHAFCGYKAVGINYLGDWGKQFGLVLLG------SQRFSNPEELKTD--PIKYLFNV 192 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 +++ ++ D SV K I + ++ + F Sbjct: 193 YVQISQAKAT---------------DPSVDVEAKKIFEKMEK-GTDSSLLDKWSHFRELS 236 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST------MVGDDVDRP 323 + +++ L + Y G KT Q D+ + L +++ +G + + Sbjct: 237 INKYKELYSKLGVEFEEYSG--ESFYEKTCQD-DIKKCNFLIKNSDGSVCLDLGKEKNPL 293 Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 ++KSDG+ Y D + K + R +IYV+ S+ + + L A +KA+I Sbjct: 294 VIKSDGTSLYLTRDFSAAKDRIARYNPKKLIYVVSSEQKEHFEDLFATL-----RKAEI- 347 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD------------------EVGSDSVRF 424 + + + GM MS R G L ++D ++ S Sbjct: 348 ---FDNLEHVQYGMVSGMSTRKGTVKFLEDIIDIATDVMMKQIDANPEKKAQIKDVSATA 404 Query: 425 MMLWRKNSELLDFDFCKVK---------EQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 + L ++DF ++K + + Y+QYA+ R +SI KDI DL Sbjct: 405 LNLAVSTLIIMDFSAKRIKGYKFDVEKRAMNTKGTGIYIQYAHCRLKSIEDMNKDI--DL 462 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + D+ + ++ E L L+ + +V+ ++ EP KL Y+ +L Sbjct: 463 NKDIKIDSKCLEQEEI----LNLLYQFIWFEKVVISSFKDNEPNKLFTYVSNLC------ 512 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W N L+ V+ + RLQ++ II + L + G+ N+M Sbjct: 513 WLTNSYNSSLK-VKGEEPSVAKTRLQVLKCARLIIGTTLKLFGLTPLNKM 561 >gi|255011461|ref|ZP_05283587.1| arginyl-tRNA synthetase [Bacteroides fragilis 3_1_12] Length = 597 Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 132/605 (21%), Positives = 253/605 (41%), Gaps = 84/605 (13%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 ++ +++ + GHL+ L R P A+ I +K + + F KGF+N Sbjct: 27 QVQLQKTKKEFEGHLTLVVFPFL-RMSKKGPEQTAQEIGEYLKANEPAVAAFNVIKGFLN 85 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDT 149 L ++ + ++L+ I +YG + V IE+ S N P+H+GH R ++G+ Sbjct: 86 LTIASAAWIELLNEIHADA-QYGIVSADENAPLVMIEYSSPNTNKPLHLGHVRNNLLGNA 144 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE----------G 199 LA+++ +G +V + +ND G I L+ W+ Y N + PE G Sbjct: 145 LANIVMANGNKVVKTNIVNDRGIHICKSMLA--WQK----YGN-GETPESSGKKGDHLVG 197 Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD--LKALNIQHD 257 Y + KH E+A+ + E P++ + + + ++K D ++AL + Sbjct: 198 DYYVAFDKHYKAEVAELMEKGMTKEEAEAASPLMNE-AREMLVKWEAGDPEVRALWQMMN 256 Query: 258 IFISE--DDFHRGDPSPIRDIIDNLARQGYVY-EGILPPPKSKTTQKCDMDRKQLLFR-- 312 ++ E D+ +R + D + + Y EG K K + + K F+ Sbjct: 257 NWVYEGFDETYR----KMGVGFDKIYYESNTYLEG-----KEKVMEGLE---KGFFFKKE 304 Query: 313 -----STMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVK 365 + + + +D + LL+ DG+ Y D+ K ++ + + MIYV+G++ + + + Sbjct: 305 DGSVWADLTAEGLDHKLLLRGDGTSVYMTQDIGTAKLRFADYPINKMIYVVGNEQNYHFQ 364 Query: 366 RLEAV--AAAVSEKKAQIN-----VLLCELVRLYRDGMPIKMSKRAGDFI-TLRHVVDEV 417 L + K+ ++ V L E R+G + + I T + E+ Sbjct: 365 VLSILLDKLGFEWGKSLVHFSYGMVELPEGKMKSREGTVVDADDLMAEMIATAKETSQEL 424 Query: 418 GS----------DSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVF------YVQYAYAR 460 G D R + L +L D K + KE+ F ++QY YAR Sbjct: 425 GKLDGLTQEEADDIARIVGLGALKYFILKVDARKNMTFNPKESIDFNGNTGPFIQYTYAR 484 Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520 +S+ R+A + + V+P E E LI +A++ V+ A P Sbjct: 485 IQSVLRKAAEA------GIVIPQVLPANIELSEKEEGLIQMVADFAAVVRQAGEDYSPSG 538 Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 +A Y+YDL ++ + ++ N + + R+ L +A ++ G+ ++G+E Sbjct: 539 IANYVYDLVKEYNQFYHD------FSILREENEDVKLFRVALSANIAKVVRLGMGLLGIE 592 Query: 581 SPNEM 585 P+ M Sbjct: 593 VPDRM 597 >gi|294885225|ref|XP_002771232.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983] gi|239874712|gb|EER03048.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983] Length = 602 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 138/582 (23%), Positives = 233/582 (40%), Gaps = 104/582 (17%) Query: 43 GHLSTNAAMILSR------PLGLD-PLTIAELIVARIKIDP--DVDSVFIAGKGFINLYL 93 G N AM L++ P G+ P I E I + + + + +SV +A GF+ + L Sbjct: 41 GDYQCNNAMGLAKKFKSELPDGMKIPKQIGEKIKSNLMEESPEEFESVTVAPAGFVTVKL 100 Query: 94 SPSYLRKILSSIVVSGIEYGR---NLIGKGT--KVNIEFVSANPTGPMHVGHCRCAVVGD 148 S ++ K L+S V+ + G+ +L K KV ++ S N MHVGH R ++G+ Sbjct: 101 SSGWIAKQLTSSVLGECKDGKVTLDLPNKEAPRKVIVDMSSPNIAKEMHVGHLRSTILGE 160 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 T++ ++ +SG +V R ++ D G Q L + Y L++ P V Sbjct: 161 TVSRILEYSGNDVHRINHVGDWGTQFGMLIEHMKDAYPDFLHHT---------PEV---- 207 Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD---LKALNIQHDIFISEDDF 265 +L Y + F EE P K S + ++ + D KA I D IS F Sbjct: 208 --SDLQTFYKAAKKRFDEE---PDFKKRSQEEVVALQSGDEYARKAWQICCD--ISRKSF 260 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK----CDMDRKQLLFRSTMVGDDVD 321 + R I+ L QG + + P +T +K + + + +F DDV Sbjct: 261 ---EEVYNRLGIEGLKEQGESFYNEMIGPTVETLEKEGLVVESNGAKCIFTDV---DDVP 314 Query: 322 RPLLKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 ++KSDG Y Y + D+ A + + D ++Y+ + K+L VA Sbjct: 315 MMVVKSDGGYGYDSTDVTAVWYRLTQLHADEVVYITDLGQEVHFKKLFEVAKMAGWHHPP 374 Query: 381 INVL--LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 L L V DG K R+G + L ++DE Sbjct: 375 QTKLEYLGFGVVCGDDGKKFKT--RSGATVKLTDLLDEAEDRAKKELESRLNAGEGEAAG 432 Query: 417 ----------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460 +G SVR+ L + + F+F K+ + K N ++ YAYAR Sbjct: 433 RSTGLTEEEFDRASKIIGVASVRYFDLRQNRTTNYIFNFDKMLD-PKGNTAVFLLYAYAR 491 Query: 461 CRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 SI R+A D LD+ + ++ E L + + + V+++ + + Sbjct: 492 ICSILRKANFDYHSGLDYSSEEVTITEEK------ERALALEILRFAEVMQSVLADLQCH 545 Query: 520 KLAFYLYDLASVFHGHWSHGR------ENPRLRFVQANNRKL 555 +L Y++DL + F ++ + E RL +A R L Sbjct: 546 RLCEYMWDLTNRFTAFYTECKVVGSDQERSRLLLCEATRRVL 587 >gi|288800432|ref|ZP_06405890.1| tRNA ligase [Prevotella sp. oral taxon 299 str. F0039] gi|288332645|gb|EFC71125.1| tRNA ligase [Prevotella sp. oral taxon 299 str. F0039] Length = 606 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 131/575 (22%), Positives = 245/575 (42%), Gaps = 113/575 (19%) Query: 80 SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHV 138 S F KGF+N ++P L++I +G + + V IE+ S N P+H+ Sbjct: 76 SGFNVVKGFLNFVVAPQAWVSQLNTIATEE-HFGEKAVQNDSPLVMIEYSSPNTNKPLHL 134 Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198 GH R ++G +L+ +M +G +V + +ND G I L+ W Q N ++ Sbjct: 135 GHVRNNLLGWSLSQIMQANGNKVVKTNIVNDRGIHICKSMLA--W---QKWGNGETPETS 189 Query: 199 GYYPGVYL------------KHVGKELADKYSSELLNFPE-----EKWLPIVKDYSVQAM 241 G G +L K KEL +Y +E L + ++ P++K+ + Q + Sbjct: 190 GK-KGDHLVGDCYVAFDKHYKEECKELQKQYIAEGLTEEQAAEQAKEEAPLIKE-ARQML 247 Query: 242 MKIIRDDLKALNI----QHDIFISEDDFHRGDPSPIRDII----DNLARQGYVYEGILPP 293 +K ++D + ++ + ++ D+ ++ I L +G V EG+ Sbjct: 248 VKWEQNDPEVRSLWSMMNNWVYAGFDETYKKMGVSFDKIYYESDTYLEGKGKVEEGLA-- 305 Query: 294 PKSKTTQKCDMDRKQLLFR-------STMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKY 345 K L FR + + + +D+ LL +SDG+ Y D+ ++ Sbjct: 306 -------------KGLFFRKDDNSVWADLSNEGLDQKLLLRSDGTSVYMTQDIGTADLRF 352 Query: 346 -ERGFDNMIYVMGSDHSGYVK----RLEAVAAAVSEKKAQINVLLCEL----------VR 390 E D MIYV+G++ + + + L+ + + + + + EL Sbjct: 353 KEFPIDKMIYVVGNEQNYHFQVLSILLDRLGFSWGKDLVHFSYGMVELPNGKMKSREGTV 412 Query: 391 LYRDGMPIKM---SKRAGDFI-TLRHVVDE--------VGSDSVRFMML---WRKN---- 431 + D + ++M +K A D L+ + +E VG ++++ +L RKN Sbjct: 413 VDADELMVEMINDAKEASDKADKLKDMSEEERAEIARIVGLGALKYFILKVDARKNMLFN 472 Query: 432 -SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490 E +DF+ N ++QY +AR SI R+A + + P + +++ Sbjct: 473 PEESIDFN---------GNTGPFIQYTHARICSILRKA-----NAENIAIPA-TLAEDAP 517 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550 + E LI L+EY ++ A P +A Y Y+L F+ + + +A Sbjct: 518 LNEKETALIQKLSEYEMAVQQAGKDYSPSGIANYCYELTKEFNQFY-----HDYTILGEA 572 Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +N K M+RL L +VA +I +G+ ++G+E P M Sbjct: 573 DNNK-KMVRLVLAKSVAKVIKNGMRLLGIEVPERM 606 >gi|83945321|ref|ZP_00957669.1| arginyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633] gi|83851155|gb|EAP89012.1| arginyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633] Length = 587 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 131/575 (22%), Positives = 235/575 (40%), Gaps = 98/575 (17%) Query: 64 IAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT- 121 +AE + AR+ ++ P ++ V IAG GF+N+ + + + +I +G+ + G+ + Sbjct: 58 VAEDVKARLAELHPHLE-VEIAGPGFLNITPAGN-----VYAIRANGLSEDDRVGGREST 111 Query: 122 ---KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 ++ I+F N PMHVGH R +V+GD+L LM F G++VT + ++ D G Q+ L Sbjct: 112 APKRLIIDFGGPNVAKPMHVGHLRSSVIGDSLQRLMRFRGHDVTSDIHLGDWGLQMGHLV 171 Query: 179 LSVFWRYQQALYNNDSDLPEGY--YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236 + +Y D+D Y P V ++ + + L + S++ PE Sbjct: 172 TELEDEKPDLVY-YDADFTGPYPDEPPVTIEDLAR-LYPQASAKAKEDPERNARSRKATA 229 Query: 237 SVQA---------------MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281 +QA + +++D AL + D++ E D + P +RD D Sbjct: 230 ELQAGRPGYRALLRHFINVSIAALKEDFGALGVHFDLWKGESDVNDLIPELVRDFKDRGV 289 Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY- 340 + I+ + D+K+L + ++ L+ S GS Y DLA Sbjct: 290 AEESDGAWIVRVARED-------DKKEL---APLI-------LVSSQGSALYATTDLATI 332 Query: 341 FKCKYERGFDNMIYVMG---SDHSGYVKRLEAVAAAVSEKKAQINV-------------- 383 K E+ + +YV+ SDH V R A A ++E+ A +V Sbjct: 333 LDRKREQDPELTLYVVDLGQSDHFEQVFRA-AYKAGLAEEGALEHVKFGTVNGTDGKRLR 391 Query: 384 -------LLCELVRLYRDGMPIKMSKRA-GDFIT---LRHVVDEVGSDSVRFMMLWRKNS 432 L +L+ RD ++++ G +T V V + +++F L + Sbjct: 392 TRAGGTFRLADLINEARDRARARLNEAGLGAELTSDEFETVARAVANAAIKFSDLQNVRT 451 Query: 433 ELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491 FD + V + K P Y+QY R +S+ ++A D + + P Sbjct: 452 TNYIFDLDRFVSFEGKTGP--YLQYQAVRIKSLLKKAGD-----------QGIAPGAVTI 498 Query: 492 -DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550 D +E LI L + + A + P L + Y LA F G ++ + Sbjct: 499 SDKAEEALIRRLDAFEGALSRAERDRAPNVLCEHAYGLAQAFSGFYAA------CPILPE 552 Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + RL+L + + L +IG++ P M Sbjct: 553 KDEAIRASRLRLAQTTLTQLEIVLGLIGIDVPERM 587 >gi|145343622|ref|XP_001416415.1| arginyl-tRNA synthetase [Ostreococcus lucimarinus CCE9901] gi|144576640|gb|ABO94708.1| arginyl-tRNA synthetase [Ostreococcus lucimarinus CCE9901] Length = 600 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 134/556 (24%), Positives = 214/556 (38%), Gaps = 88/556 (15%) Query: 39 DCAH---GHLSTNAAMILSRPLG-------LDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 +CA+ G +++AM + L P +A+ IVA I DS+ IAG GF Sbjct: 86 ECANTSLGDFQSSSAMQIFSALAKAGETSFRSPRDVADEIVAGISEREMFDSITIAGPGF 145 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 IN LS +Y+R L S E G + V ++F S N MHVGH R ++GD Sbjct: 146 INFRLSDNYIRSELFRETKSA-ELGPTI---KRHVLVDFSSPNIAKEMHVGHLRSTIIGD 201 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS--DLPEGYYPGVYL 206 TL ++ F GY TR +N G + + + + + + S DL Y Sbjct: 202 TLCNVFEFCGYTTTR---VNHVGDWGTQFGMLIQFMKENGISPDSSVSDLQACYKQAKQK 258 Query: 207 KHVGKELADKYSSELLNF----PEEK--WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 V + K ++ PE W I + +A + I D LK ++ Sbjct: 259 FDVDDDFKAKSKDMVVKLQSYDPETAHMWRQICS--ASRAEFQTIYDRLKIRIVEK---- 312 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 E ++ PS ++D L + + E D L + DD Sbjct: 313 GESFYNDMIPS----VLDELQSKRLIVE----------------DAGALCIFTE--SDDT 350 Query: 321 DRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 KSDG + Y + DLA + + D +IYV + K + A A Sbjct: 351 PVICRKSDGGFNYASTDLAAVRHRIMSEKADKIIYVTDQGQHKHFKAIFKTANEAGWGDA 410 Query: 380 QI-------NVLLCELVRLYRDGMPIKMSKRAGDFIT---LRHVVDEVGSDSVRFMMLWR 429 Q+ V+L E + K + G +T ++H +G SV++ L Sbjct: 411 QVALEHVGFGVVLDEA-----EERCFKFLEEKGTNLTTDEIKHASKVLGVSSVKYADL-- 463 Query: 430 KNSELLDFDFCKVKEQS-KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488 +N+ L ++ F + K N Y+QY++AR +I +++ F P Sbjct: 464 QNNRLTNYTFSFDRMLDLKGNTAMYLQYSHARVATILQKSS-------FAGRPDQFSISH 516 Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH----GRENPR 544 E E L + + ++ + P KL YLY L S F+ ++ G +N Sbjct: 517 EE----ERLLAIQIIKFQDALLTTLQDLAPSKLCEYLYTLCSTFNNFYAECKVIGGDNEE 572 Query: 545 LRFVQANNRKLTMMRL 560 R + R L M+L Sbjct: 573 SR-IYLCERTLYTMKL 587 >gi|315144839|gb|EFT88855.1| arginyl-tRNA synthetase [Enterococcus faecalis TX2141] Length = 563 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 78/289 (26%), Positives = 133/289 (46%), Gaps = 54/289 (18%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------ 370 KSDG+ Y DLA Y K Y+ F +YV+G++ S + K+L+AV Sbjct: 300 KSDGATLYITRDLAAALYRKRTYD--FAKSLYVVGNEQSNHFKQLKAVLKELGFDWSDDM 357 Query: 371 -----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 +S +K +I VLL E++ +++++ D V +VG Sbjct: 358 EHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAVTLAGNQINEKNPDLANREEVAKQVGV 416 Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 +V F L KN L +FDF V+ + + P YVQY +AR SI R+A Sbjct: 417 GAVIFHDL--KNDRLNNFDFVLDEVVRFEGETGP--YVQYTHARAMSILRKAN------- 465 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 F + + + D +++ L ++P + A EP +A + LA F+ ++ Sbjct: 466 ---FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEKYEPSVIAKHSIHLAQAFNKYY 522 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +H +R + +++K RL LV+AVA+++ L ++G+ +P EM Sbjct: 523 AH------VRILDEDDQKEA--RLALVYAVATVLKEDLRLLGLHAPEEM 563 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/159 (23%), Positives = 78/159 (49%), Gaps = 6/159 (3%) Query: 25 EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82 E+ +D+I ++E P+ HG ++ A L++ P IA + +I + + + Sbjct: 17 EELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRKAPQQIAAELAEKID-GTNFEKIE 74 Query: 83 IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 + G ++N +++ + + ++ +V YG + G V I+ S N P+ +GH Sbjct: 75 VVGP-YLNFFMNKKAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMSSPNIAKPISMGHL 133 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 R V+G+++A ++ GY+ R ++ D G Q L ++ Sbjct: 134 RSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVA 172 >gi|257421892|ref|ZP_05598882.1| arginyl-tRNA synthetase [Enterococcus faecalis X98] gi|257163716|gb|EEU93676.1| arginyl-tRNA synthetase [Enterococcus faecalis X98] gi|315155401|gb|EFT99417.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0043] Length = 563 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 78/289 (26%), Positives = 133/289 (46%), Gaps = 54/289 (18%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------ 370 KSDG+ Y DLA Y K Y+ F +YV+G++ S + K+L+AV Sbjct: 300 KSDGATLYITRDLAAALYRKRTYD--FAKSLYVVGNEQSNHFKQLKAVLKELGFEWSDDM 357 Query: 371 -----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 +S +K +I VLL E++ +++++ D V +VG Sbjct: 358 EHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAVTLAGNQINEKNPDLANREEVAKQVGV 416 Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 +V F L KN L +FDF V+ + + P YVQY +AR SI R+A Sbjct: 417 GAVIFHDL--KNDRLNNFDFVLDEVVRFEGETGP--YVQYTHARAMSILRKAN------- 465 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 F + + + D +++ L ++P + A EP +A + LA F+ ++ Sbjct: 466 ---FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEKYEPSVIAKHSIHLAQAFNKYY 522 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +H +R + +++K RL LV+AVA+++ L ++G+ +P EM Sbjct: 523 AH------VRILDEDDQKEA--RLALVYAVATVLKEDLRLLGLHAPEEM 563 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/159 (23%), Positives = 78/159 (49%), Gaps = 6/159 (3%) Query: 25 EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82 E+ +D+I ++E P+ HG ++ A L++ P IA + +I + + + Sbjct: 17 EELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRKAPQQIAAELAEKID-GTNFEKIE 74 Query: 83 IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 + G ++N +++ + + ++ +V YG + G V I+ S N P+ +GH Sbjct: 75 VVGP-YLNFFMNKEAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMSSPNIAKPISMGHL 133 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 R V+G+++A ++ GY+ R ++ D G Q L ++ Sbjct: 134 RSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVA 172 >gi|255513612|gb|EET89878.1| arginyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 632 Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 85/319 (26%), Positives = 150/319 (47%), Gaps = 31/319 (9%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G +S N A +++ + P +A I++ I V SV GFIN YL RK Sbjct: 44 GDISCNIAFRIAKSISRKPADVASSIISGIGGIEAVKSV-KEENGFINFYLD----RKKF 98 Query: 103 SSIVVSGIEYG-----RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 +++V+ + G ++ IG G V +E SANP P+H+G R A++G+ LA++ A Sbjct: 99 TALVMEWLLKGGSNAVKSTIGSGKIVVVESPSANPVHPLHMGQVRNALIGNVLANIYAVC 158 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL---KHVGKELA 214 GY+V RE YI+D G Q+ + + + N + + VY+ K+ Sbjct: 159 GYKVEREDYIDDLGFQVAQAVWGLMHLEELGIEINPNGKFDHEIGKVYVEVNKYAETHEI 218 Query: 215 DKYSSELLNFPEE--KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 + +++L E+ + ++ S + + + L LNI HD+ + E D Sbjct: 219 KEDIAKVLTLMEQDGTYESVLCRDSAEKYVMAEYETLFELNIYHDLLVWESDI------- 271 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKC---DMDRKQLL---FRSTMVGDDVDRPLLK 326 IR+ + A + +G++ PK C DR + L FR+ + ++V + L++ Sbjct: 272 IREKLFEKAMKIMEDKGVIDRPKEGKYAGCAIISFDRIKDLPEEFRN--LKENV-KVLVR 328 Query: 327 SDGSYTYFAADLAYFKCKY 345 S+G+ Y A D+A+ K+ Sbjct: 329 SNGTPDYVAKDIAFHMWKF 347 Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust. Identities = 38/174 (21%), Positives = 77/174 (44%), Gaps = 15/174 (8%) Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 + +V ++RF L N + L+F + + + + P Y QY +AR I + Sbjct: 473 IAAKVALAAIRFEFLRLSNEKKLNFSWATALNFEGRSGP--YCQYMFARANRILENYGNE 530 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 + ++ I D E +L+ ++ V+E + +P L Y +LA + Sbjct: 531 ------GVLYKSTIKVSGIEDDLEFELVKKMSGCVTVLERSCRELKPNLLVEYAGELALL 584 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + H + +Q + KL+ RL++V ++++ L ++GVE ++M Sbjct: 585 FGKFYEH----KNILKLQDEDEKLS--RLEIVTCFKVVMDAVLTVLGVEPLSKM 632 >gi|226939931|ref|YP_002795004.1| arginyl-tRNA synthetase [Laribacter hongkongensis HLHK9] gi|254782968|sp|C1D5W4|SYR_LARHH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|226714857|gb|ACO73995.1| Syr [Laribacter hongkongensis HLHK9] Length = 573 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 1/135 (0%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M ++ ++P +A+ ++ ++ + + IAG GFIN+ L+P +L K L Sbjct: 36 GDFQANGVMAAAKQRKMNPRELAQQVIDKLDLAGIASKIEIAGPGFINITLAPDFLAKRL 95 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + V+ G + + +V +E+ S N MHVGH R ++GDTLA ++ F G + Sbjct: 96 DT-VLDDARLGVRSVTEPQRVMVEYSSPNLAKEMHVGHLRSTIIGDTLARVVEFLGNNMV 154 Query: 163 REYYINDAGAQINTL 177 R ++ D G Q L Sbjct: 155 RGNHVGDWGTQFGML 169 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 72/311 (23%), Positives = 125/311 (40%), Gaps = 76/311 (24%) Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVA---- 371 GD + + K DG + Y DL + ++ E D +IYV+ + S + +++ + Sbjct: 297 GDPMGVIVQKKDGGFLYTTTDLGAVRYRHKELNLDRVIYVVDARQSQHFQQMFTICRKAG 356 Query: 372 ---AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416 A+S + ++ + DG P K R+G + L ++DE Sbjct: 357 FAPEAMSLEHVGFGTMMGD------DGKPFKT--RSGGTVKLIELLDEAEERAYALVSEK 408 Query: 417 ---------------VGSDSVRFMMLWR-KNSE-LLDFDFCKVKEQSKENPVFYVQYAYA 459 VG +V++ L + +NS+ + ++D E N Y+QYAY Sbjct: 409 NPDLPEEEKRKIAHAVGIGAVKYADLSKNRNSDYIFNWDLMLAFEG---NTAPYLQYAYT 465 Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 R SIFR+ FD +I + +E QL + LA++ V+ P+ Sbjct: 466 RVASIFRKVD------RFDASAPLLITE-----PAEKQLALMLAQFSDVLNEVARTCFPH 514 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQA-----NNRKLTMMRLQLVHAVASIINSGL 574 L YLY +A+ F +RF +A + RL+L A + +GL Sbjct: 515 LLTQYLYQVATQF------------MRFYEACPILKSEGATQASRLKLARITADTLKTGL 562 Query: 575 NIIGVESPNEM 585 ++G+E M Sbjct: 563 GLLGIEVLESM 573 >gi|89891117|ref|ZP_01202625.1| arginyl-tRNA synthetase, ArgRS [Flavobacteria bacterium BBFL7] gi|89516761|gb|EAS19420.1| arginyl-tRNA synthetase, ArgRS [Flavobacteria bacterium BBFL7] Length = 593 Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 139/633 (21%), Positives = 257/633 (40%), Gaps = 138/633 (21%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 L+ + I R +G L+ +L R + +P I E I A + D+ + + KGF Sbjct: 23 LENVEITLTRKDQNGDLTVMVFPML-RHIKGNPAVIGEQIGAELA-KTDLITSYEVIKGF 80 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKG-TKVNIEFVSANPTGPMHVGHCRCAVVG 147 +N+ ++ K + I+ S +YG++ + K + V +E+ S N P+H+GH R ++G Sbjct: 81 LNITVAHEVYLKDFNDIL-SQSDYGKSPVDKTKSGVMVEYSSPNTNKPLHLGHVRNNLLG 139 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE--------- 198 ++A ++ +G +V + IND G I L+ W Y N + PE Sbjct: 140 YSVAQIVEATGRKVNKTQIINDRGIHICKSMLA--WEQ----YGN-GETPESTGLKGDKL 192 Query: 199 -GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257 G Y + + KE+AD ++ +K P S+ A +++R Sbjct: 193 VGNYYVKFDQEYKKEIADLIAAGKTEEEAKKEAP-----SLIAAQEMLR----------- 236 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQ--GYVYEGILPPPKSKTTQKCDMDRKQLLFRST- 314 + +GD + + L ++ G+VY+G T + ++ L + S Sbjct: 237 ------KWEQGDEAVVA-----LWKKMNGWVYDGF-----ETTYKNLGVNFDSLYYESNT 280 Query: 315 -MVGDDV---------------------------DRPL-LKSDGSYTYFAADL--AYFKC 343 ++G DV DR + L+SDG+ Y D+ A + Sbjct: 281 YLLGKDVVQIGLDKGVFEKDPDGSVWIDLTDEGLDRKIVLRSDGTAVYMTQDIGTAIQRV 340 Query: 344 KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSK 402 K + ++M+Y +G++ + K L + + A+ + L +V L KM Sbjct: 341 K-DHDINSMVYTVGNEQDYHFKVLFLILKKLGYDWAENLYHLSYGMVELPSG----KMKS 395 Query: 403 RAGDFI-----------TLRHVVDE------------------VGSDSVRFMMLWRKNSE 433 R G + T R + E +G ++++ ML + Sbjct: 396 REGTVVDADELMEEMTDTAREIAQEQGKLEGMSDADKGDLYKMIGLGALKYFMLKVDPKK 455 Query: 434 LLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492 + FD + V Q P ++QY +AR +SI +++ DL + + Sbjct: 456 SMMFDPKESVDFQGNTGP--FIQYTHARIKSILKKSGFEQGDLK--------VATDLALT 505 Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552 + +I L +YP IE A P +A Y+Y+L F+ + + P++ V+ +N Sbjct: 506 DKDAAVIKLLQQYPETIEAAARNYSPALVANYVYELVKEFNSFYQN---VPKI--VEESN 560 Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL L A++I S ++G+E P +M Sbjct: 561 TNMKQFRLALCFKTAAVIKSACGLLGIEVPEQM 593 >gi|311747338|ref|ZP_07721123.1| arginine--tRNA ligase [Algoriphagus sp. PR1] gi|126579055|gb|EAZ83219.1| arginine--tRNA ligase [Algoriphagus sp. PR1] Length = 596 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 127/594 (21%), Positives = 229/594 (38%), Gaps = 132/594 (22%) Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 I E + A + P+V + F KGF+NL L+ + + E L G KV Sbjct: 63 IGEYLKANV---PEV-AGFNVVKGFLNLELNELIWLDVFQGLYAD--ESLGQLPSNGQKV 116 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +E+ S N P+H+GH R +G ++A ++ +GYEV + +ND G I ++ + Sbjct: 117 MVEYSSPNTNKPLHLGHLRNNFLGYSVAEILKANGYEVIKANLVNDRGIHI-CKSMVAYQ 175 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 ++ S L + G Y KE Y E++ E K YS + K Sbjct: 176 KFGNGETPESSGLKGDHLAGKYYVIFDKE----YKKEIVALKE-------KGYSEEEAKK 224 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ--GYVYEGILPPPKSKTTQK 301 + + + R + ++I +L +Q +VY G K+ T Sbjct: 225 -----------NAPLLLEAQEMLRKWEAKDEEVI-SLWKQMNAWVYAGF---DKTYQTMG 269 Query: 302 CDMD--------------------RKQLLFRST-------MVGDDVDRPL-LKSDGSYTY 333 D D + ++ F+ + G+ +D L L+SDG+ Y Sbjct: 270 VDFDKYYYESDTYLLGKDIVEEGLKNEVFFKKENGSVWVDLSGEGLDEKLVLRSDGTSVY 329 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 D+ KY+ D +YV+G++ + L + + +L R Y Sbjct: 330 ITQDMGTADLKYDDFKIDKSVYVVGNEQDYHFDVLFKI--------------MQKLGRPY 375 Query: 393 RDGM-----------PIKMSKRAGDFI----TLRHVVDEVGSDSVRFMMLWRKNSE---- 433 +G+ KM R G + ++ +VD + + N E Sbjct: 376 GNGLYHLSYGMVDLPSGKMKSREGTVVDADDLMQEMVDTAAKHTEELGKIDGFNKEQAAE 435 Query: 434 -------------LLDFDFCK---------VKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 LL D K ++ Q P ++QY++AR +SI R+A I Sbjct: 436 LYEILGLGALKYFLLKVDPKKRMLFNPQESIEFQGNTGP--FIQYSHARIKSILRKADQI 493 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 + + + + ++ + SE LI L ++ + I+ A P +A YL+DLA Sbjct: 494 GVE-----YQKPDLSGITKLEESESSLIFMLGDFKKKIKLAGDDLAPSIIAQYLFDLAKE 548 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ ++ L ++ + +R+ L A IN G++++G++ P M Sbjct: 549 YNRFYAD------LPIFHESDNAIQALRVALSALTAKTINKGMSLLGIQVPERM 596 >gi|238916469|ref|YP_002929986.1| arginyl-tRNA synthetase [Eubacterium eligens ATCC 27750] gi|238871829|gb|ACR71539.1| arginyl-tRNA synthetase [Eubacterium eligens ATCC 27750] Length = 588 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 128/609 (21%), Positives = 243/609 (39%), Gaps = 106/609 (17%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 V RP C N AM ++ P IA+ +VA++ + + GFIN+ Sbjct: 30 VSNRPDLC---EFQCNGAMAAAKAYKKAPFMIADEVVAKLADNKMFSKIESVKPGFININ 86 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 + YL L+ + + ++G V +++ AN P+HVGH R AV+G+++ Sbjct: 87 ICEDYLAGYLNEMSETE-KFGYVNSESNKTVIVDYGGANAAKPLHVGHLRSAVIGESVKR 145 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG-- 210 + F G + + ++ D G Q+ + + R + Y +DS + G Y + Sbjct: 146 INTFVGNKTIGDVHLGDWGLQMGLIIEELRDRKPELPYFDDS------FTGEYPEEAPFT 199 Query: 211 -KELADKY------SSELLNFPEEKWLPIVK----DYSVQA----MMKIIRDDLKA---- 251 EL + Y S E + F E +K D + +A +M + + DLK Sbjct: 200 ISELEEIYPAASAKSKEDIAFAERAHEATLKLQSGDKACRAIWHHIMNVSKADLKKNYDN 259 Query: 252 LNIQHDIFISEDDFHRGDPSP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310 LN+ D++ E D P I D+++ + G YE S+ D+ ++ Sbjct: 260 LNVHFDLWKGE-----SDAQPYIDDMVNKMIADGIAYE-------SQGATVVDIQQE--- 304 Query: 311 FRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367 GD + P + KSDG+ Y +DLA + E+ + Y+ +D + L Sbjct: 305 ------GDTKELPPCIVRKSDGAALYATSDLATI-VEREKLYHPDTYIYLADKR---QEL 354 Query: 368 EAVAAAVSEKKAQINVLLCEL------VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 + KKA I ++ +DG P K R+G + L H++ ++ Sbjct: 355 HFTQVFRTAKKAGIVAPDADMRFVGFGTMNGKDGKPFKT--RSGGVMRLEHLIADIDEAV 412 Query: 422 VRFMMLWRKNSELLDFDFCKV-----------KEQSKENPVF--------------YVQY 456 +M R E D K+ Q+ ++ VF Y+ Y Sbjct: 413 YEKIMSNRTVEETEARDTAKIVGLAALKYGDLSNQASKDYVFDIERFSSFEGNTGPYILY 472 Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 R +SI + + + N + + + SE L + L ++ +I+ A Sbjct: 473 TIVRIKSILNKYTE-------NGGSTNNLKIMAATEESEKNLSLSLIKFADIIDGAYRDN 525 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 P+K+ ++Y++++ F+G + + + + + + L+ SI+ +++ Sbjct: 526 APHKICQFIYEVSNAFNGFYHNN------KILSEPDEAKKASYIALISLTKSILEQCIDL 579 Query: 577 IGVESPNEM 585 + +E P+ M Sbjct: 580 LAIECPDRM 588 >gi|325473427|gb|EGC76622.1| arginyl-tRNA synthetase [Treponema denticola F0402] Length = 590 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 121/598 (20%), Positives = 249/598 (41%), Gaps = 88/598 (14%) Query: 27 KIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI-- 83 KIL ++I IE P + G ++ ++ P IA + AR+ + D+ + Sbjct: 26 KILPEQINIETPPNPEMGDVAF-PLFTFAKSFKSSPAKIASDVCARLLENEDIKKYGMPK 84 Query: 84 AGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 A ++N++L+ L +L ++ YG+ G ++ IEF S N P+H+GH R Sbjct: 85 AIGPYLNVFLAKGDLASNVLDKVLKEKENYGKTSSLSGKRIMIEFSSPNTNKPLHLGHLR 144 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202 +G++++ ++ F G +V + IND G I ++ + ++ + ++ + Sbjct: 145 NDALGESISRILKFCGADVFKVNIINDRGVHI-CKSMIAYQKFGEGKTPESENIKSDRFV 203 Query: 203 G---VYLKHVGKELADKYSSE----LLNFP--EEKWLPIVKDYSVQAMMKIIRDDLKALN 253 G V +E +K +E LL++ E K L + ++ I++ K Sbjct: 204 GDMYVAFHKYSQENPEKAEAEAKQMLLDWEAGENKELIGLWKKMNGWAIEGIKETYKRTG 263 Query: 254 IQHD-IFISEDDFHRGDPSPIRDIIDNL---ARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 I D ++ + + +G ++ + + G V+ + P +D+K L Sbjct: 264 ISFDKLYFESETYLKGKDQILKGLEAGVFYKEEDGSVWVDLAP---------IKLDKKVL 314 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLE 368 L+SDG+ Y D+ +++ F+ MIYV+G++ + K L Sbjct: 315 ---------------LRSDGTSLYMTQDIGTAISRHKDWPFNQMIYVVGNEQEYHFKVLF 359 Query: 369 AVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 V + E + L +V L KM R G + +++ + ++++ + Sbjct: 360 YVLKQLGFEWADDLYHLSYGMVNLPEG----KMKSREGTVVDADDLINSLQDEALKKIEE 415 Query: 428 WRKNSELLD------------FDFCKVKEQSKENPVF--------------YVQYAYARC 461 + E+ D + ++ K++ +F Y+QY AR Sbjct: 416 NGREKEVGDAAVAAENIAVGALHYFLLQVSPKKDMLFNPKESLSFTGNTGPYLQYMGARI 475 Query: 462 RSIFRQAK--DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 SI R+A+ + L +++ ESE+ L+ L ++P +E + + ++P Sbjct: 476 SSILRKAETAEGKEKLKNGKLNASLLTNESEW-----ALLKTLEDFPEQVERSALRKDPS 530 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 L YLY+L+ F + R+ P + N L+ R++L A ++ + +N++ Sbjct: 531 ALTAYLYELSKAFSRFY---RDCP---ILSGENADLSYTRMELARATKIVLQNAMNLV 582 >gi|283778010|ref|YP_003368765.1| arginyl-tRNA synthetase [Pirellula staleyi DSM 6068] gi|283436463|gb|ADB14905.1| arginyl-tRNA synthetase [Pirellula staleyi DSM 6068] Length = 651 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/145 (32%), Positives = 71/145 (48%), Gaps = 1/145 (0%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +I +D G N AM L LG P IA ++A K+D + +AG GFINL Sbjct: 28 MIRPSQDAKFGDYQANFAMPLKAKLGKAPQQIAADVIAATKLDDLCEPATVAGPGFINLK 87 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 S+L + L+ + VS + G + ++F S N PMHVGH R V+GD+L Sbjct: 88 FRDSWLEERLN-LAVSDPQLGIAPTAQPRTYIVDFSSPNVAKPMHVGHIRSTVIGDSLCK 146 Query: 153 LMAFSGYEVTREYYINDAGAQINTL 177 ++ G+ V + ++ D G Q + Sbjct: 147 ILRALGHHVVSDNHLGDWGTQFGMI 171 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 73/295 (24%), Positives = 121/295 (41%), Gaps = 46/295 (15%) Query: 321 DRPLL--KSDGSYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 D P+L K DG++ Y DLA + + ER D + YV+ S + +L A A Sbjct: 373 DAPMLVRKRDGAFLYATTDLATIQYRQERWKPDAIWYVVDHRQSEHFDKLFIAAKAWGYT 432 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416 + + V L DG P K R+GD + L ++DE Sbjct: 433 NTDLTHVKFGTV-LGDDGKPFKT--RSGDTVGLDGLLDEAISRALAIVQSSSSDLSPEEQ 489 Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 VG ++++ L + + F + K+ Q N Y+QY+YAR RSIF + Sbjct: 490 QQVAERVGIGALKYADLSQNRTSDYTFSYDKML-QMNGNTATYMQYSYARVRSIFSRG-- 546 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 ++D R + + +E L + L + + A P+ L YL+DLA Sbjct: 547 ---NIDIAAL-RTSGALIALTEPAERALGLSLLRFEEALAEAVATAMPHHLTTYLFDLAK 602 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + EN + ++A++ RL L A I GL+++G++ M Sbjct: 603 SYSTFF----EN--CKVLKADDEATKNSRLLLCDLTARTIKHGLSLLGIDVVERM 651 >gi|219114449|ref|XP_002176395.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217402641|gb|EEC42631.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 564 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 124/538 (23%), Positives = 215/538 (39%), Gaps = 74/538 (13%) Query: 42 HGHLSTNAAMILSRPLGLD---------PLTIAELIVARI-KIDPDVDSVFIAGKGFINL 91 HG NAAM + L D P +A ++A I P + + + G GF+ Sbjct: 4 HGDYQCNAAMPVFAALKKDSSMPDNIRSPPDVARALMAAIGDTHPVIMELSMNGPGFVLC 63 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + PS+L + + +GI + LI K T V ++F S N MHVGH R ++G+ + Sbjct: 64 RIRPSFLETHVDRFLQTGI-LPKPLIPKQTCV-VDFSSPNIAKEMHVGHLRSTIIGEAVC 121 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ-ALYNNDSDLPEGYYPGVYLKHVG 210 ++ F G++V R ++ D G Q L + Y + A +N+D D + P + Sbjct: 122 RILEFVGHDVHRINHVGDWGTQFGMLIQYLKEEYPEVANHNSDVD-DQAALPNI------ 174 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 +L Y S F E +V A+ + L+ + D +S +F + Sbjct: 175 TDLTQFYKSAKARFDESADFKKTSQTNVVALQSGDPECLRIWKLLCD--VSRQEFEK--V 230 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSD 328 D+ + + + Y +PP ++ + ++ + V D PL+ KSD Sbjct: 231 YQRLDVTTHEFGESF-YNAKIPPVIAEFEAAGKISVEEGGAKCVFV-DKFKVPLMLQKSD 288 Query: 329 GSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS--EKKAQINVLL 385 G Y Y + D+A K + E D +I + + K + A + ++ Q+ + Sbjct: 289 GGYGYDSTDMAALKYRLQELKADRIIVITDFSQGDHFKMVYAAGRDIGWLDRNQQLEHIG 348 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------------- 416 V+ DG K R+GD + L ++DE Sbjct: 349 FGTVQ-GEDGKRFKT--RSGDTVRLVDLLDEAVERMEGSLRERIESDKSNIALDEVHDIA 405 Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 +G +V++ L R + F + ++ + + V Y+ YA R SI +AK Sbjct: 406 EAIGYGAVKYYDLRRNPTTNYKFSYDQMLDTKGDTGV-YLLYARVRLESIVAKAKQ---- 460 Query: 475 LDFDLFPRNVIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 D+ + +I + SE L+ L ++P VIE PY + Y+Y LA Sbjct: 461 -DYSIDVEELIQNGEKVRLTHPSERNLVFQLQQFPDVIEQTLEDLFPYHVCEYVYKLA 517 >gi|254526915|ref|ZP_05138967.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202] gi|221538339|gb|EEE40792.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202] Length = 604 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 151/655 (23%), Positives = 262/655 (40%), Gaps = 130/655 (19%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L F L + L++ D K + E IL + +I + G N + LS+ +P Sbjct: 8 LTKQFEQSLLDSLEKNDKKGEFE--ILRKNLITQSSKEEFGDYQCNVCLSLSKIYKKNPR 65 Query: 63 TIAE----LIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVV--SGIEYGRN 115 I+ L+ I S+ IAG GFIN+ L + L +I S+I +GI R Sbjct: 66 DISNDFINLLNKNKSISKLCKSLEIAGPGFINIKLKDAVLINEIKSNIQCNRAGITLIRK 125 Query: 116 LIGKG--TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173 + G KV ++F S N MHVGH R ++GD+++ + GYEV R ++ D G Q Sbjct: 126 DLDSGFSNKVIVDFSSPNIAKEMHVGHLRSTIIGDSISRIFELRGYEVLRLNHVGDWGTQ 185 Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK----ELADKYSSELLNFPEEKW 229 L + + LY+ND L+ +GK +L + Y F E Sbjct: 186 FGMLITQL-----KDLYSND------------LEEIGKIKISDLVEFYKESKKRFDNESE 228 Query: 230 LPIVKDYSVQAMMKIIRDDLKALN---------------IQHDIFISEDDFHRGDPSP-I 273 + S + ++K+ R D+K++ I ++ I ++ +P + Sbjct: 229 F---QKRSREEVVKLQRGDIKSIKAWKLLCDQSRKEFDEIYKNLKIKIEERGESFYNPFL 285 Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL----LKSDG 329 + +ID+L + + E KC +F M + +PL K DG Sbjct: 286 KSVIDDLNLKKILVED--------QGAKC-------VFLDGMTNKE-GKPLPLIIQKKDG 329 Query: 330 SYTYFAADLAYFKCKYER---GFD--NMIYVMG---SDHSGYVKRLEAVAAAVSEKKAQI 381 + Y DLA + ++ + G D +IYV ++H V ++ A + E + Q+ Sbjct: 330 GFNYATTDLAAIRYRFNKPPNGDDASRIIYVTDHGQANHFAGVFQVAKKAKWIPENR-QV 388 Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------- 416 + + LV+ DG +K R G+ I L+ +++E Sbjct: 389 DHVPFGLVQGI-DGKKLKT--REGETIRLKDLLNEAVRRAKEDLLKRLKDEERYETEEFI 445 Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 +G +V++ L + F F K+ + N Y+ Y R I R+ Sbjct: 446 ANTSRIIGLGAVKYADLSQNRITNYQFSFDKMLSLNG-NTAPYLLYTLVRILGIKRKNDF 504 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 ++ DF + E + SE +LI L ++ VI + P +L YL++L Sbjct: 505 VYDSKDF-----QYVNYEHK---SEWKLIRKLLKFDEVIISIEKDLMPNRLCNYLFELCQ 556 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ + P L+ + + + RL L A + L ++G+E+ M Sbjct: 557 TFNRFYDQV---PILK----EEKYIKISRLNLCDLTAKTLKLSLELLGIETLERM 604 >gi|42526483|ref|NP_971581.1| arginyl-tRNA synthetase [Treponema denticola ATCC 35405] gi|81412594|sp|Q73P28|SYR_TREDE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|41816676|gb|AAS11462.1| arginyl-tRNA synthetase [Treponema denticola ATCC 35405] Length = 590 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 123/601 (20%), Positives = 252/601 (41%), Gaps = 94/601 (15%) Query: 27 KIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI-- 83 KIL ++I IE P + G ++ ++ P IA + AR+ + D+ + Sbjct: 26 KILPEQINIETPPNPEMGDVAF-PLFTFAKSFKSSPAKIASDVCARLLENEDIKKYGMPK 84 Query: 84 AGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 A ++N++L+ L +L ++ YG+ G ++ IEF S N P+H+GH R Sbjct: 85 AIGPYLNVFLAKGDLASNVLDKVLKEKENYGKTSSLSGKRIMIEFSSPNTNKPLHLGHLR 144 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202 +G++++ ++ F G +V + IND G I ++ + ++ + ++ + Sbjct: 145 NDALGESISRILKFCGADVFKVNIINDRGVHI-CKSMIAYQKFGEGKTPESENIKSDRFV 203 Query: 203 G---VYLKHVGKELADKYSSE----LLNFP--EEKWLPIVKDYSVQAMMKIIRDDLKALN 253 G V +E +K +E LL++ E K L + ++ I++ K Sbjct: 204 GDMYVAFHKYSQENPEKAEAEAKQMLLDWEAGENKELIGLWKKMNGWAIEGIKETYKRTG 263 Query: 254 IQHD-IFISEDDFHRGDPSPIRDIIDNL---ARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 I D ++ + + +G ++ + + G V+ + P +D+K L Sbjct: 264 ISFDKLYFESETYLKGKDQILKGLEAGVFYKEEDGSVWVDLAP---------IKLDKKVL 314 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLE 368 L+SDG+ Y D+ +++ F+ MIYV+G++ + K L Sbjct: 315 ---------------LRSDGTSLYMTQDIGTAISRHKDWPFNQMIYVVGNEQEYHFKVLF 359 Query: 369 AVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 V + E + L +V L KM R G + +++ + ++++ + Sbjct: 360 YVLKQLGFEWADDLYHLSYGMVNLPEG----KMKSREGTVVDADDLINSLQDEALKKIEE 415 Query: 428 WRKNSELLD------------FDFCKVKEQSKENPVF--------------YVQYAYARC 461 + E+ D + ++ K++ +F Y+QY AR Sbjct: 416 NGREKEVGDAAVAAENIAVGALHYFLLQVSPKKDMLFNPKESLSFTGNTGPYLQYMGARI 475 Query: 462 RSIFRQA-----KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 SI R+A K+ D + +++ ESE+ +L+ L ++P +E + + + Sbjct: 476 SSILRKAETAEGKEKLKDGKLN---ASLLTNESEW-----ELLKTLEDFPEQVERSALRK 527 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 +P L YLY+L+ F + R+ P L A+ L+ R++L A ++ + +N+ Sbjct: 528 DPSALTAYLYELSKAFSRFY---RDCPILSGEDAD---LSYTRMELARATKIVLQNAMNL 581 Query: 577 I 577 + Sbjct: 582 V 582 >gi|46204895|ref|ZP_00209614.1| COG0018: Arginyl-tRNA synthetase [Magnetospirillum magnetotacticum MS-1] Length = 160 Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 44/145 (30%), Positives = 77/145 (53%), Gaps = 7/145 (4%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FA F +R++ L+ + ++ + + L R+++E PRD +HG L+TNAA++L++ Sbjct: 1 MNIFALFETRVREALESLIRSGRLPEGLDLSRVLVEPPRDPSHGDLATNAALVLAKEAKQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P + E + ++ DP V +AG GFINL L P +++ + + G YGR + Sbjct: 61 NPKALGEALAEELRGDPRVSEASVAGPGFINLRLVPEVFHEVIRAALKDGEAYGRAQMAA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCA 144 + S +P P G C A Sbjct: 121 ARSTS----STSP--PTRPGRCMSA 139 >gi|288803789|ref|ZP_06409217.1| tRNA ligase [Prevotella melaninogenica D18] gi|288333776|gb|EFC72223.1| tRNA ligase [Prevotella melaninogenica D18] Length = 606 Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 123/574 (21%), Positives = 226/574 (39%), Gaps = 122/574 (21%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 KGF+NL ++ + +L+ I + + + V IE+ S N P+H+GH R + Sbjct: 81 KGFLNLVIAQAAWTGLLNDINADEKFGEKRVTDESPLVMIEYSSPNTNKPLHLGHVRNNL 140 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY-------QQALYNNDSDLPE 198 +G +LA +M +G +V + +ND G I L+ W+ +QA D + + Sbjct: 141 LGWSLAQIMEANGNKVVKTNIVNDRGIHICKSMLA--WQKWGNGITPEQAGKKGDHLIGD 198 Query: 199 GYYPGVYLKHVG---KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255 Y ++ KH K+L ++Y E + E K K + + Sbjct: 199 FYV--LFDKHYKEECKQLQEQYEKEGMTADEAK--------------KKAEHEAPLIKEA 242 Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT---------------- 299 HD+ + + DP IR + + + +VY G K+ Sbjct: 243 HDMLVK---WEANDPE-IRALWEKM--NNWVYAGFDETYKAMGVGFDKIYYESNTYLVGK 296 Query: 300 QKCDMDRKQLLF--------RSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKY-ERGF 349 +K + ++ LF + + + +D+ LL + DG+ Y D+ + ++ + Sbjct: 297 KKVEEGLEKGLFIRKEDNSVWADLTNEGLDQKLLLRKDGTSVYMTQDIGTAEMRFNDYPI 356 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI- 408 D MIYV+G++ + + + L + + K + V + +G KM R G + Sbjct: 357 DKMIYVVGNEQNYHFQVLSILLDRLGFKWGKDLVHFSYGMVELPNG---KMKSREGTVVD 413 Query: 409 ---------------------TLRHVVDE--------VGSDSVRFMML---WRKN----- 431 L + +E VG ++++ +L RKN Sbjct: 414 ADDLVASMIENAKSLSEDKVNKLEGITEEEKNEIARIVGMGALKYFILKVDARKNMLFNP 473 Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491 E +DF+ N ++QY YAR RSI R+A+ L L ++ Sbjct: 474 EESIDFNG---------NTGPFIQYTYARIRSILRKAEAQNITLPATL------NDDAPL 518 Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551 + E+ LI L ++ + A I P +A Y Y+L F+ + + A+ Sbjct: 519 NEKEIALIQKLNDFGAAVAQAGIDYSPSGIANYCYELTKEFNQFYHD------YSILNAD 572 Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL + VA +I +G+ ++G+E P M Sbjct: 573 TEAEKIARLMIAKNVAKVIKNGMALLGIEVPERM 606 >gi|227519810|ref|ZP_03949859.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0104] gi|227072748|gb|EEI10711.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0104] Length = 563 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 78/289 (26%), Positives = 133/289 (46%), Gaps = 54/289 (18%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------ 370 KSDG+ Y DLA Y K Y+ F +YV+G++ S + K+L+AV Sbjct: 300 KSDGATLYITRDLAAALYRKRTYD--FAKSLYVVGNEQSNHFKQLKAVLKELGFDWSDDM 357 Query: 371 -----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 +S +K +I VLL E++ +++++ D V +VG Sbjct: 358 EHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAVTLAGNQINEKNPDLANRDEVAKQVGV 416 Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 +V F L KN L +FDF V+ + + P YVQY +AR SI R+A Sbjct: 417 GAVIFHDL--KNDRLNNFDFVLDEVVRFEGETGP--YVQYTHARAMSILRKAN------- 465 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 F + + + D +++ L ++P + A EP +A + LA F+ ++ Sbjct: 466 ---FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEKYEPSVIAKHSIHLAQAFNKYY 522 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +H +R + +++K RL LV+AVA+++ L ++G+ +P EM Sbjct: 523 AH------VRILDEDDQK--GARLALVYAVATVLKEDLRLLGLHAPEEM 563 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/159 (23%), Positives = 79/159 (49%), Gaps = 6/159 (3%) Query: 25 EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82 E+ +D+I ++E P+ HG ++ A L++ P IA + +I + + + Sbjct: 17 EELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRKAPQQIAAELAEKID-GTNFEKIE 74 Query: 83 IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 + G ++N +++ + + ++ ++V YG + G V I+ S N P+ +GH Sbjct: 75 VVGP-YLNFFMNKEAVSQAVIGAVVKEKNNYGNSTFGNNGNVPIDMSSPNIAKPISMGHL 133 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 R V+G+++A ++ GY+ R ++ D G Q L ++ Sbjct: 134 RSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVA 172 >gi|281421436|ref|ZP_06252435.1| arginine--tRNA ligase [Prevotella copri DSM 18205] gi|281404508|gb|EFB35188.1| arginine--tRNA ligase [Prevotella copri DSM 18205] Length = 606 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 127/567 (22%), Positives = 239/567 (42%), Gaps = 109/567 (19%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCA 144 KGF+NL ++P+ +L++I ++G + + + V IE+ S N P+H+GH R Sbjct: 82 KGFLNLSIAPAAWVGLLNTINADP-KFGEKPVTENSPLVMIEYSSPNTNKPLHLGHVRNN 140 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE------ 198 ++G +LA +M +G +V + +ND G I L+ W L + + PE Sbjct: 141 LLGWSLAQIMEANGNKVIKTNIVNDRGIHICKSMLA--W-----LKWGNGETPETSGKKG 193 Query: 199 ----GYYPGVYLKHVGKELA--------DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 G Y + KH +E+A D E + P++K+ + + ++K Sbjct: 194 DHLIGDYYVAFDKHYREEIAELKAQYMKDGMDEEAATEKAKVEAPLIKE-AHEMLVKWEN 252 Query: 247 DD--LKAL--NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-EGILPPPKSKTTQK 301 +D ++AL + + ++ D+ ++ + D + + Y EG K K + Sbjct: 253 NDPEVRALWQKMNNWVYAGFDETYK----MMGVSFDKIYYESNTYLEG-----KKKVEEG 303 Query: 302 CDMDRKQLLFR-------STMVGDDVDRP-LLKSDGSYTYFAADLAYFKCKYER-GFDNM 352 + K L FR + + + +D+ LL+SDG+ Y D+ +++ D M Sbjct: 304 LE---KGLFFRKDDNSVWADLTNEGLDQKLLLRSDGTSVYMTQDIGTADLRFKDFPIDKM 360 Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC-ELVRL------YRDGMPIKMSKRAG 405 IYV+G++ + + + L + + K + V +V L R+G + Sbjct: 361 IYVVGNEQNYHFQVLSILLDRLGFKWGKDLVHFSYGMVELPNGKMKSREGTVVDADDLMA 420 Query: 406 DFIT-LRHVVDE------------------VGSDSVRFMML---WRKN-----SELLDFD 438 + I R DE VG ++++ +L RKN E +DF+ Sbjct: 421 EMIKDARQTSDELGKFKDMSEEERQEISRIVGLGALKYFILKVDARKNMLFNPEESIDFN 480 Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498 N ++QY YAR RSI R+A ++ +L ++ + E+ L Sbjct: 481 ---------GNTGPFIQYTYARIRSIMRKAAAEGIEIPAEL------GADAPINEKEIDL 525 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 I + ++ + +A P +A Y Y+L F+ + + A + + Sbjct: 526 IQKMNDFAAAVADAGNNYNPGGIANYCYELTKEFNQFYHD------YSILNAESEAEKIT 579 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 RL L VA I+ +G++++G+E P M Sbjct: 580 RLVLAANVAKILKNGMSLLGIEVPERM 606 >gi|167648344|ref|YP_001686007.1| arginyl-tRNA synthetase [Caulobacter sp. K31] gi|189083526|sp|B0T019|SYR_CAUSK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|167350774|gb|ABZ73509.1| arginyl-tRNA synthetase [Caulobacter sp. K31] Length = 613 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 134/609 (22%), Positives = 247/609 (40%), Gaps = 108/609 (17%) Query: 48 NAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVV 107 N A+ ++ +P IA +V +K DP + SV IAG GFIN+ +S L I ++ + Sbjct: 42 NGALAAAKSAKRNPREIAVQVVDVLKADPRLASVEIAGVGFINMRVSTDAL-SIRANEIA 100 Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167 + G + +V +++ N PMHVGH R +++G+++ L F G +V + + Sbjct: 101 ADPRAGAEPLAHPRRVLVDYAGPNVAKPMHVGHLRASIIGESVKRLYRFRGDDVVGDAHF 160 Query: 168 NDAGAQINTLALSVFWR--YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN-- 223 D G Q+ L ++ + +AL + P + K V E A + + + L+ Sbjct: 161 GDWGFQMGLLISAIMEEDAFIRALLERLVEAPREFSKADEDK-VMSEFAQRVTLDDLDRL 219 Query: 224 FP----EEKWLPIVKDYSVQAMMKI---------------------IRDDLKALNIQHDI 258 +P +K P K+ + +A ++ + + AL + D+ Sbjct: 220 YPAASARQKEDPEFKEKARKATAELQNGRFGYRLLWRHFVNISRVALEREFHALGVDFDL 279 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS----KTTQKCDMDRKQLLFRST 314 + E D ++D+I + RQ V +G+L + + + + +K+L S Sbjct: 280 WKGESD--------VQDLIAPMVRQLEV-KGLLVDDQGARIVRVARPGETKKKKLPDGSV 330 Query: 315 MVGDDVDRPLL--KSDGSYTYFAADLAY-------------FKCKYERGFDNMIYVMGSD 359 + + D PLL S+GS Y DLA C +R D+ V + Sbjct: 331 VEVESPD-PLLVVSSEGSAMYGTTDLATILDRRKSFDPHLILYCVDQRQADHFEQVFRAA 389 Query: 360 H-SGYVK--RLEAVAAAVS--------EKKAQINVLLCELVRLYRD---------GMPIK 399 + +GY + LE + + +A + L +L+ + R+ G+ + Sbjct: 390 YLAGYAEPGSLEHIGFGTMNGSDGKPFKTRAGGVLKLHDLIEMAREKARERLREAGLGAE 449 Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMML--WRKNSELLDFD-FCKVKEQSKENPVFYVQY 456 +S+ A +VG +++F L +R S + D D F + K P Y+ Y Sbjct: 450 LSQEA-----FEETAHKVGIAALKFADLQNFRGTSYVFDLDRFTSF--EGKTGP--YLLY 500 Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 R +SI R+A + + +I E +E L + L + + A + Sbjct: 501 QSVRIKSILRKAAEQ------KVVSGAIIVGE----PAERDLTLLLDAFEGALSEAYDKK 550 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 P +A + Y LA F ++ + A+N RL L + L++ Sbjct: 551 APNFIAEHAYKLAQTFSKFYAA------CPILSADNDATRASRLALAETTLKQLELALDL 604 Query: 577 IGVESPNEM 585 +G+E+P M Sbjct: 605 LGIEAPERM 613 >gi|210609959|ref|ZP_03288188.1| hypothetical protein CLONEX_00372 [Clostridium nexile DSM 1787] gi|210152705|gb|EEA83711.1| hypothetical protein CLONEX_00372 [Clostridium nexile DSM 1787] Length = 588 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 127/580 (21%), Positives = 240/580 (41%), Gaps = 101/580 (17%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P+ IA +V +K ++ V GFIN+ L ++ L + + G K Sbjct: 55 PIMIANDVVEVLKESVCIEQVEAVNPGFINIILDGEFVASYLGKMSEQE-KLGVEEPTKQ 113 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 + +++ AN P+HVGH R AV+G+++ + + G+++ + ++ D G Q+ + Sbjct: 114 KTIIVDYGGANVAKPLHVGHLRSAVIGESVKRIGKYVGHKMIGDVHLGDWGYQMGLVITE 173 Query: 181 VFWRYQQALYNNDSDLPEGYYPG------VYLKHVGKELADKYSSELLNFPEEKWLPIV- 233 + R + Y +D EG YP L+ + A Y+ E ++ EE Sbjct: 174 LKKRKPELPYFDDQ--FEGEYPEESPFTITELEEI-YPTASAYAKEHEDYKEEALQATFL 230 Query: 234 -----KDYSV--QAMMKIIRDDLK----ALNIQHDIFISEDDFHRGDPSP-IRDIIDNLA 281 + Y+ + +M + DLK ALN++ D++ E D P I ++++ + Sbjct: 231 LQNGHRGYTAIWKHIMNVSVADLKKNYGALNVEFDLWKGE-----ADAQPYIPEMVEYMK 285 Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADL 338 ++GY + +D+ L+ D + P +LKSDG+ Y DL Sbjct: 286 KEGYAH----------------IDQGALVVDVKEENDTKEIPPCMILKSDGAALYDTTDL 329 Query: 339 AYFKCKYERGF--DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL----- 391 A + E+ + D +IY+ + L V KK +I EL + Sbjct: 330 ATL-IEREKLYHPDEVIYLADKR-----QELHFVQVFRCAKKTKIINENMELKFIGFGTM 383 Query: 392 -YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE-----------LLDFDF 439 +DG P K R G + L +++++ + + + R SE L + Sbjct: 384 NGKDGKPFKT--RDGGVMRLESLINDINEEMYKKIAENRTMSEEEARKTAQMVALSAMKY 441 Query: 440 CKVKEQSKENPVFYVQ--------------YAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 + Q+ ++ VF V+ Y R +SI + + D + Sbjct: 442 GDLSNQAAKDYVFDVERFISFEGNTGPYNLYTIVRIKSILAKYAESGKDAAKCKMKK--- 498 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 PQ SE L++ +A++ VIE A P+K+ Y+YDL++ F+ + ++ Sbjct: 499 PQTQ----SEKALMLEVAKFNNVIETAFEELAPHKICAYIYDLSNAFNRFYHE----TKI 550 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +RK + L L+ A + + ++++G E+P M Sbjct: 551 LSEENEDRKAGFIALLLITKRA--LEACIDMLGFEAPERM 588 >gi|315174024|gb|EFU18041.1| arginyl-tRNA synthetase [Enterococcus faecalis TX1346] Length = 563 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 78/289 (26%), Positives = 132/289 (45%), Gaps = 54/289 (18%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------ 370 KSDG+ Y DLA Y K Y+ F +YV+G++ S + K+L+AV Sbjct: 300 KSDGATLYITRDLAAALYRKRTYD--FAKSLYVVGNEQSNHFKQLKAVLKELGFDWSDDM 357 Query: 371 -----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 +S +K +I VLL E++ +++++ D V +VG Sbjct: 358 EHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAVTLAGNQINEKNPDLANREEVAKQVGV 416 Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 +V F L KN L +FDF V+ + + P YVQY +AR SI R+A Sbjct: 417 GAVIFHDL--KNDRLNNFDFVLDEVVRFEGETGP--YVQYTHARAMSILRKAN------- 465 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 F + + + D +++ L ++P + A EP +A + LA F+ ++ Sbjct: 466 ---FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEKYEPSVIAKHSIHLAQAFNKYY 522 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +H +R + + +K RL LV+AVA+++ L ++G+ +P EM Sbjct: 523 AH------VRILDEDAQKEA--RLALVYAVATVLKEDLRLLGLHAPEEM 563 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/159 (23%), Positives = 78/159 (49%), Gaps = 6/159 (3%) Query: 25 EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82 E+ +D+I ++E P+ HG ++ A L++ P IA + +I + + + Sbjct: 17 EELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRKAPQQIASELAEKID-GTNFEKIE 74 Query: 83 IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 + G ++N +++ + + ++ +V YG + G V I+ S N P+ +GH Sbjct: 75 VVGP-YLNFFMNKEAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMSSPNIAKPISMGHL 133 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 R V+G+++A ++ GY+ R ++ D G Q L ++ Sbjct: 134 RSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVA 172 >gi|321476501|gb|EFX87462.1| hypothetical protein DAPPUDRAFT_235532 [Daphnia pulex] Length = 499 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 118/505 (23%), Positives = 210/505 (41%), Gaps = 90/505 (17%) Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 ++ +EF S N P HVGH R + G+ L++L G+ V R Y+ D G Q L + Sbjct: 44 QIIVEFSSPNIAKPFHVGHLRSTIHGNFLSNLFTALGHNVKRLNYLGDWGTQFGLLQFGL 103 Query: 182 FWRYQQALYNND--SDLPEGYYPGVYLKHVGKELADKYSS------ELLNFPEEKWLPIV 233 Q ++ D S P +Y+K LA+K S L E I Sbjct: 104 ----DQGWFSWDEISKNPIRSLLEIYVK--ANALAEKDESVSVAARSLFQRLESGDQEIS 157 Query: 234 KDYSV--QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291 K+++ Q + +R L ++ D F E + + + + I++ G L Sbjct: 158 KNWAEIRQHTVTELRQTYARLGVKFDEFNWESQYGIKESAKVLSILEK--------SGHL 209 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFD 350 + T+ ++ K+++ L+KSDGS Y D+A ++ + F Sbjct: 210 VTRAGEGTKVIRLNEKKMV------------TLVKSDGSSLYLTRDVAAAIDRWGKFPFR 257 Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK-MSKRAGDFIT 409 M+YV+ + S + L+++ + + A N+ E V+ R IK MS R G + Sbjct: 258 RMLYVVDNAQSDHFVALKSILSLMDHAWAS-NI---EHVKFGR----IKGMSTRKGTIVF 309 Query: 410 LRHVVDE---------VGSDSVRFMMLWRKNSELLDF---------DFCKVKE------- 444 L ++DE + S + R + +N ++ D D + ++ Sbjct: 310 LSDLLDEAHARMKAKQITSQNTRVNV--EENPQITDILAVSAVIINDLKQRRQRDYVFNW 367 Query: 445 ----QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500 Q K + +QY ++R S+ + PD D D ++I QE E + L+ Sbjct: 368 DDALQDKGDTGIRLQYTHSRLHSLEKMCGVRLPD-DLDSLDTSLI-QEQEL----IDLMR 421 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 L + +V++++ EP L YL+DL+ H + P V++ +L +RL Sbjct: 422 DLGRFHQVLQDSYTHLEPCTLVRYLFDLS---HSLGVALKTIP----VKSQETELAQVRL 474 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 + A +++ GL I+GV+ EM Sbjct: 475 AIFSASKRVLSIGLKILGVQPLEEM 499 >gi|257084503|ref|ZP_05578864.1| arginyl-tRNA synthetase [Enterococcus faecalis Fly1] gi|256992533|gb|EEU79835.1| arginyl-tRNA synthetase [Enterococcus faecalis Fly1] Length = 563 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 78/289 (26%), Positives = 132/289 (45%), Gaps = 54/289 (18%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------ 370 KSDG+ Y DLA Y K Y+ F +YV+G++ S + K+L+AV Sbjct: 300 KSDGATLYITRDLAAALYRKRTYD--FAKSLYVVGNEQSNHFKQLKAVLKELGFDWSDDM 357 Query: 371 -----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 +S +K +I VLL E++ +++++ D V +VG Sbjct: 358 EHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAVTLAGNQINEKNPDLANREEVAKQVGV 416 Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 +V F L KN L +FDF V+ + + P YVQY +AR SI R+A Sbjct: 417 GAVIFHDL--KNDRLNNFDFVLDEVVRFEGETGP--YVQYTHARAMSILRKAN------- 465 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 F + + + D +++ L ++P + A EP +A + LA F+ ++ Sbjct: 466 ---FTPDATKRYALNDKDSWEVVKLLQKFPETVMQAAEKYEPSVIAKHSIHLAQAFNKYY 522 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +H +R + + +K RL LV+AVA+++ L ++G+ +P EM Sbjct: 523 AH------VRILDEDAQKEA--RLALVYAVATVLKEDLRLLGLHAPEEM 563 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/159 (23%), Positives = 78/159 (49%), Gaps = 6/159 (3%) Query: 25 EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82 E+ +D+I ++E P+ HG ++ A L++ P IA + +I + + + Sbjct: 17 EELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRKAPQQIAAELAEKID-GTNFEKIE 74 Query: 83 IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 + G ++N +++ + + ++ +V YG + G V I+ S N P+ +GH Sbjct: 75 VVGP-YLNFFMNKKAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMSSPNIAKPISMGHL 133 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 R V+G+++A ++ GY+ R ++ D G Q L ++ Sbjct: 134 RSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVA 172 >gi|255975129|ref|ZP_05425715.1| arginyl-tRNA synthetase [Enterococcus faecalis T2] gi|256616973|ref|ZP_05473819.1| arginyl-tRNA synthetase [Enterococcus faecalis ATCC 4200] gi|256763163|ref|ZP_05503743.1| arginyl-tRNA synthetase [Enterococcus faecalis T3] gi|256853827|ref|ZP_05559192.1| arginyl-tRNA synthetase [Enterococcus faecalis T8] gi|307276760|ref|ZP_07557872.1| arginyl-tRNA synthetase [Enterococcus faecalis TX2134] gi|307285744|ref|ZP_07565878.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0860] gi|307290479|ref|ZP_07570392.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0411] gi|255968001|gb|EET98623.1| arginyl-tRNA synthetase [Enterococcus faecalis T2] gi|256596500|gb|EEU15676.1| arginyl-tRNA synthetase [Enterococcus faecalis ATCC 4200] gi|256684414|gb|EEU24109.1| arginyl-tRNA synthetase [Enterococcus faecalis T3] gi|256710770|gb|EEU25813.1| arginyl-tRNA synthetase [Enterococcus faecalis T8] gi|295113508|emb|CBL32145.1| arginyl-tRNA synthetase [Enterococcus sp. 7L76] gi|306498426|gb|EFM67930.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0411] gi|306502505|gb|EFM71772.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0860] gi|306506537|gb|EFM75695.1| arginyl-tRNA synthetase [Enterococcus faecalis TX2134] gi|315030154|gb|EFT42086.1| arginyl-tRNA synthetase [Enterococcus faecalis TX4000] gi|315161616|gb|EFU05633.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0645] Length = 563 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 78/289 (26%), Positives = 132/289 (45%), Gaps = 54/289 (18%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------ 370 KSDG+ Y DLA Y K Y+ F +YV+G++ S + K+L+AV Sbjct: 300 KSDGATLYITRDLAAALYRKRTYD--FAKSLYVVGNEQSNHFKQLKAVLKELGFEWSDDM 357 Query: 371 -----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 +S +K +I VLL E++ +++++ D V +VG Sbjct: 358 EHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAVTLAGNQINEKNPDLANREEVAKQVGV 416 Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 +V F L KN L +FDF V+ + + P YVQY +AR SI R+A Sbjct: 417 GAVIFHDL--KNDRLNNFDFVLDEVVRFEGETGP--YVQYTHARAMSILRKAN------- 465 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 F + + + D +++ L ++P + A EP +A + LA F+ ++ Sbjct: 466 ---FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEKYEPSVIAKHSIHLAQAFNKYY 522 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +H +R + + +K RL LV+AVA+++ L ++G+ +P EM Sbjct: 523 AH------VRILDEDAQK--EARLALVYAVATVLKEDLRLLGLHAPEEM 563 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/159 (23%), Positives = 79/159 (49%), Gaps = 6/159 (3%) Query: 25 EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82 E+ +D+I ++E P+ HG ++ A L++ P IA + +I + + + Sbjct: 17 EELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRKAPQQIAAELAEKID-GTNFEKIE 74 Query: 83 IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 + G ++N +++ + + ++ ++V YG + G V I+ S N P+ +GH Sbjct: 75 VVGP-YLNFFMNKEAVSQAVIGAVVKEKNNYGNSTFGNNGNVPIDMSSPNIAKPISMGHL 133 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 R V+G+++A ++ GY+ R ++ D G Q L ++ Sbjct: 134 RSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVA 172 >gi|229545112|ref|ZP_04433837.1| arginyl-tRNA synthetase [Enterococcus faecalis TX1322] gi|229309777|gb|EEN75764.1| arginyl-tRNA synthetase [Enterococcus faecalis TX1322] Length = 563 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 78/289 (26%), Positives = 132/289 (45%), Gaps = 54/289 (18%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------ 370 KSDG+ Y DLA Y K Y+ F +YV+G++ S + K+L+AV Sbjct: 300 KSDGATLYITRDLAAALYRKRTYD--FAKSLYVVGNEQSNHFKQLKAVLKELGFDWSDDM 357 Query: 371 -----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 +S +K +I VLL E++ +++++ D V +VG Sbjct: 358 EHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAVTLAGNQINEKNPDLANREEVAKQVGV 416 Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 +V F L KN L +FDF V+ + + P YVQY +AR SI R+A Sbjct: 417 GAVIFHDL--KNDRLNNFDFVLDEVVRFEGETGP--YVQYTHARAMSILRKAN------- 465 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 F + + + D +++ L ++P + A EP +A + LA F+ ++ Sbjct: 466 ---FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEKYEPSVIAKHSIHLAQAFNKYY 522 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +H +R + + +K RL LV+AVA+++ L ++G+ +P EM Sbjct: 523 AH------VRILDEDAQKEA--RLALVYAVATVLKEDLRLLGLHAPEEM 563 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/159 (23%), Positives = 78/159 (49%), Gaps = 6/159 (3%) Query: 25 EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82 E+ +D+I ++E P+ HG ++ A L++ P IA + +I + + + Sbjct: 17 EELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRKAPQQIAAELAEKID-GTNFEKIE 74 Query: 83 IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 + G ++N +++ + + ++ +V YG + G V I+ S N P+ +GH Sbjct: 75 VVGP-YLNFFMNKEAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMSSPNIAKPISMGHL 133 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 R V+G+++A ++ GY+ R ++ D G Q L ++ Sbjct: 134 RSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVA 172 >gi|29376964|ref|NP_816118.1| arginyl-tRNA synthetase [Enterococcus faecalis V583] gi|227554005|ref|ZP_03984052.1| arginyl-tRNA synthetase [Enterococcus faecalis HH22] gi|256963634|ref|ZP_05567805.1| arginyl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|307271575|ref|ZP_07552847.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0855] gi|38372516|sp|Q831N1|SYR_ENTFA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|29344429|gb|AAO82188.1| arginyl-tRNA synthetase [Enterococcus faecalis V583] gi|227176829|gb|EEI57801.1| arginyl-tRNA synthetase [Enterococcus faecalis HH22] gi|256954130|gb|EEU70762.1| arginyl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|306511847|gb|EFM80845.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0855] gi|315574745|gb|EFU86936.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0309B] gi|315580914|gb|EFU93105.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0309A] gi|327535755|gb|AEA94589.1| arginine--tRNA ligase [Enterococcus faecalis OG1RF] Length = 563 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 78/289 (26%), Positives = 132/289 (45%), Gaps = 54/289 (18%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------ 370 KSDG+ Y DLA Y K Y+ F +YV+G++ S + K+L+AV Sbjct: 300 KSDGATLYITRDLAAALYRKRTYD--FAKSLYVVGNEQSNHFKQLKAVLKELGFDWSDDM 357 Query: 371 -----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 +S +K +I VLL E++ +++++ D V +VG Sbjct: 358 EHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAVTLAGNQINEKNPDLANREEVAKQVGV 416 Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 +V F L KN L +FDF V+ + + P YVQY +AR SI R+A Sbjct: 417 GAVIFHDL--KNDRLNNFDFVLDEVVRFEGETGP--YVQYTHARAMSILRKAN------- 465 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 F + + + D +++ L ++P + A EP +A + LA F+ ++ Sbjct: 466 ---FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEKYEPSVIAKHSIHLAQAFNKYY 522 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +H +R + + +K RL LV+AVA+++ L ++G+ +P EM Sbjct: 523 AH------VRILDEDAQKEA--RLALVYAVATVLKEDLRLLGLHAPEEM 563 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/159 (23%), Positives = 78/159 (49%), Gaps = 6/159 (3%) Query: 25 EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82 E+ +D+I ++E P+ HG ++ A L++ P IA + +I + + + Sbjct: 17 EELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRKAPQQIAAELAEKID-GTNFEKIE 74 Query: 83 IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 + G ++N +++ + + ++ +V YG + G V I+ S N P+ +GH Sbjct: 75 VVGP-YLNFFMNKEAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMSSPNIAKPISMGHL 133 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 R V+G+++A ++ GY+ R ++ D G Q L ++ Sbjct: 134 RSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVA 172 >gi|257090658|ref|ZP_05585019.1| arginyl-tRNA synthetase [Enterococcus faecalis CH188] gi|312905196|ref|ZP_07764317.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0635] gi|256999470|gb|EEU85990.1| arginyl-tRNA synthetase [Enterococcus faecalis CH188] gi|310631586|gb|EFQ14869.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0635] gi|315579134|gb|EFU91325.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0630] Length = 563 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 78/289 (26%), Positives = 132/289 (45%), Gaps = 54/289 (18%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------ 370 KSDG+ Y DLA Y K Y+ F +YV+G++ S + K+L+AV Sbjct: 300 KSDGATLYITRDLAAALYRKRTYD--FAKSLYVVGNEQSNHFKQLKAVLKELGFDWSDDM 357 Query: 371 -----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 +S +K +I VLL E++ +++++ D V +VG Sbjct: 358 EHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAVTLAGNQINEKNPDLANREEVAKQVGV 416 Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 +V F L KN L +FDF V+ + + P YVQY +AR SI R+A Sbjct: 417 GAVIFHDL--KNDRLNNFDFVLDEVVRFEGETGP--YVQYTHARAMSILRKAN------- 465 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 F + + + D +++ L ++P + A EP +A + LA F+ ++ Sbjct: 466 ---FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEKYEPSVIAKHSIHLAQAFNKYY 522 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +H +R + + +K RL LV+AVA+++ L ++G+ +P EM Sbjct: 523 AH------VRILDEDAQKEA--RLALVYAVATVLKEDLRLLGLHAPEEM 563 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/159 (23%), Positives = 78/159 (49%), Gaps = 6/159 (3%) Query: 25 EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82 E+ +D+I ++E P+ HG ++ A L++ P IA + +I + + + Sbjct: 17 EELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRKAPQQIAAELAEKID-GTNFEKIE 74 Query: 83 IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 + G ++N +++ + + ++ +V YG + G V I+ S N P+ +GH Sbjct: 75 VVGP-YLNFFMNKEAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMSSPNIAKPISMGHL 133 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 R V+G+++A ++ GY+ R ++ D G Q L ++ Sbjct: 134 RSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVA 172 >gi|254417711|ref|ZP_05031435.1| arginyl-tRNA synthetase [Brevundimonas sp. BAL3] gi|196183888|gb|EDX78864.1| arginyl-tRNA synthetase [Brevundimonas sp. BAL3] Length = 600 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 135/586 (23%), Positives = 228/586 (38%), Gaps = 99/586 (16%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A I R+ DP SV +AG GFINL L+ + L + + + G ++ Sbjct: 54 NPRELAGRIAERLSSDPRFASVEVAGPGFINLKLADALLAERAAEVAADAEHAGSAVVAD 113 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 KV I++ N PMHVGH R A++G++L L F G VT + + D G Q+ L + Sbjct: 114 PRKVVIDYGGPNVAKPMHVGHLRSAIIGESLKRLFRFRGDHVTGDAHFGDWGFQMGLLIV 173 Query: 180 SVFWRYQQALYNNDSDLPEGYYP---GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236 + D L EG+ G + LAD L + K P +D Sbjct: 174 AC----------GDEGLAEGFLAEGDGPFPADSPVTLADLDRLYPLAAGKAKEDPAFRDR 223 Query: 237 SVQAMMK-----------------IIRDDLKA----LNIQHDIFISEDDFHRGDPSPIRD 275 + +A + + R+ LK L++ D++ E D DP + + Sbjct: 224 ARKATAELQNGRPGYRALWTHFVAVSREALKREYGDLSVDFDLWNGESD---ADPL-MPE 279 Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTY 333 ++ +L G + E + K RK+ L +++ PLL S+GS Y Sbjct: 280 MLAHLKATGLLVED--DGAQVVHVAKPGETRKKKLADGSVIEAPSPPPLLVISSEGSAMY 337 Query: 334 FAADLAY-FKCKYERGFDNMIYVMG---SDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 DLA K D +YV+ ++H V R +A +E + L Sbjct: 338 GTTDLATILDRKKALAPDLALYVVDERQAEHFEQVFRAAYLAGYAAEGSLE---HLGFGT 394 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE-------------VGSD---------------- 420 +DG P K RAG + LR ++D+ +G D Sbjct: 395 MNGQDGKPFKT--RAGGVLKLRDLIDQATDKARERLHEAKLGDDLSPEEFEAIAHKVAIA 452 Query: 421 SVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 +++F L + FD + + K P Y+ Y R +S+ R+A + Sbjct: 453 ALKFADLSNARTTSYVFDLDRFMSFEGKTGP--YLLYQSVRIKSLLRKAAEQ------GA 504 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 P ++ E +E L + L + + +A + P+ +A + Y +A F ++ Sbjct: 505 TPGAIVIAEQ----AERDLALTLDAFSTAVSDAYDKRMPHLVAEHAYRVAQSFSKFYAA- 559 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A + RL L A + + L ++G+E+P M Sbjct: 560 -----CPVLVAPDEATRASRLALSAAALRQLETALTLLGIETPERM 600 >gi|257079701|ref|ZP_05574062.1| arginyl-tRNA synthetase [Enterococcus faecalis JH1] gi|257087497|ref|ZP_05581858.1| arginyl-tRNA synthetase [Enterococcus faecalis D6] gi|257419922|ref|ZP_05596916.1| arginyl-tRNA synthetase [Enterococcus faecalis T11] gi|294780860|ref|ZP_06746215.1| arginine--tRNA ligase [Enterococcus faecalis PC1.1] gi|307270768|ref|ZP_07552058.1| arginyl-tRNA synthetase [Enterococcus faecalis TX4248] gi|312899897|ref|ZP_07759215.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0470] gi|256987731|gb|EEU75033.1| arginyl-tRNA synthetase [Enterococcus faecalis JH1] gi|256995527|gb|EEU82829.1| arginyl-tRNA synthetase [Enterococcus faecalis D6] gi|257161750|gb|EEU91710.1| arginyl-tRNA synthetase [Enterococcus faecalis T11] gi|294452105|gb|EFG20552.1| arginine--tRNA ligase [Enterococcus faecalis PC1.1] gi|306512882|gb|EFM81524.1| arginyl-tRNA synthetase [Enterococcus faecalis TX4248] gi|311292893|gb|EFQ71449.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0470] gi|315025346|gb|EFT37278.1| arginyl-tRNA synthetase [Enterococcus faecalis TX2137] gi|315148497|gb|EFT92513.1| arginyl-tRNA synthetase [Enterococcus faecalis TX4244] gi|315150094|gb|EFT94110.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0012] gi|315166333|gb|EFU10350.1| arginyl-tRNA synthetase [Enterococcus faecalis TX1341] gi|323481459|gb|ADX80898.1| arginyl-tRNA synthetase [Enterococcus faecalis 62] Length = 563 Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 78/289 (26%), Positives = 132/289 (45%), Gaps = 54/289 (18%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------ 370 KSDG+ Y DLA Y K Y+ F +YV+G++ S + K+L+AV Sbjct: 300 KSDGATLYITRDLAAALYRKRTYD--FAKSLYVVGNEQSNHFKQLKAVLKELGFEWSDDM 357 Query: 371 -----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 +S +K +I VLL E++ +++++ D V +VG Sbjct: 358 EHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAVTLAGNQINEKNPDLANREEVAKQVGV 416 Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 +V F L KN L +FDF V+ + + P YVQY +AR SI R+A Sbjct: 417 GAVIFHDL--KNDRLNNFDFVLDEVVRFEGETGP--YVQYTHARAMSILRKAN------- 465 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 F + + + D +++ L ++P + A EP +A + LA F+ ++ Sbjct: 466 ---FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEKYEPSVIAKHSIHLAQAFNKYY 522 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +H +R + + +K RL LV+AVA+++ L ++G+ +P EM Sbjct: 523 AH------VRILDEDAQKEA--RLALVYAVATVLKEDLRLLGLHAPEEM 563 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/159 (23%), Positives = 78/159 (49%), Gaps = 6/159 (3%) Query: 25 EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82 E+ +D+I ++E P+ HG ++ A L++ P IA + +I + + + Sbjct: 17 EELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRKAPQQIAAELAEKID-GTNFEKIE 74 Query: 83 IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 + G ++N +++ + + ++ +V YG + G V I+ S N P+ +GH Sbjct: 75 VVGP-YLNFFMNKEAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMSSPNIAKPISMGHL 133 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 R V+G+++A ++ GY+ R ++ D G Q L ++ Sbjct: 134 RSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVA 172 >gi|256961238|ref|ZP_05565409.1| arginyl-tRNA synthetase [Enterococcus faecalis Merz96] gi|257416704|ref|ZP_05593698.1| arginyl-tRNA synthetase [Enterococcus faecalis AR01/DG] gi|293383522|ref|ZP_06629432.1| arginine--tRNA ligase [Enterococcus faecalis R712] gi|293387365|ref|ZP_06631921.1| arginine--tRNA ligase [Enterococcus faecalis S613] gi|307287653|ref|ZP_07567696.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0109] gi|312906072|ref|ZP_07765084.1| arginyl-tRNA synthetase [Enterococcus faecalis DAPTO 512] gi|312909418|ref|ZP_07768273.1| arginyl-tRNA synthetase [Enterococcus faecalis DAPTO 516] gi|256951734|gb|EEU68366.1| arginyl-tRNA synthetase [Enterococcus faecalis Merz96] gi|257158532|gb|EEU88492.1| arginyl-tRNA synthetase [Enterococcus faecalis ARO1/DG] gi|291079034|gb|EFE16398.1| arginine--tRNA ligase [Enterococcus faecalis R712] gi|291083263|gb|EFE20226.1| arginine--tRNA ligase [Enterococcus faecalis S613] gi|306501391|gb|EFM70694.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0109] gi|310627718|gb|EFQ11001.1| arginyl-tRNA synthetase [Enterococcus faecalis DAPTO 512] gi|311290091|gb|EFQ68647.1| arginyl-tRNA synthetase [Enterococcus faecalis DAPTO 516] gi|315032650|gb|EFT44582.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0017] gi|315164876|gb|EFU08893.1| arginyl-tRNA synthetase [Enterococcus faecalis TX1302] Length = 563 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 78/289 (26%), Positives = 132/289 (45%), Gaps = 54/289 (18%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------ 370 KSDG+ Y DLA Y K Y+ F +YV+G++ S + K+L+AV Sbjct: 300 KSDGATLYITRDLAAALYRKRTYD--FAKSLYVVGNEQSNHFKQLKAVLKELGFDWSDDM 357 Query: 371 -----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 +S +K +I VLL E++ +++++ D V +VG Sbjct: 358 EHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAVTLAGNQINEKNPDLANREEVAKQVGV 416 Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 +V F L KN L +FDF V+ + + P YVQY +AR SI R+A Sbjct: 417 GAVIFHDL--KNDRLNNFDFVLDEVVRFEGETGP--YVQYTHARAMSILRKAN------- 465 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 F + + + D +++ L ++P + A EP +A + LA F+ ++ Sbjct: 466 ---FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEKYEPSVIAKHSIHLAQAFNKYY 522 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +H +R + + +K RL LV+AVA+++ L ++G+ +P EM Sbjct: 523 AH------VRILDEDAQK--EARLALVYAVATVLKEDLRLLGLHAPEEM 563 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/159 (23%), Positives = 79/159 (49%), Gaps = 6/159 (3%) Query: 25 EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82 E+ +D+I ++E P+ HG ++ A L++ P IA + +I + + + Sbjct: 17 EELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRKAPQQIAAELAEKID-GTNFEKIE 74 Query: 83 IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 + G ++N +++ + + ++ ++V YG + G V I+ S N P+ +GH Sbjct: 75 VVGP-YLNFFMNKEAVSQAVIGAVVKEKNNYGNSTFGNNGNVPIDMSSPNIAKPISMGHL 133 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 R V+G+++A ++ GY+ R ++ D G Q L ++ Sbjct: 134 RSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVA 172 >gi|315170234|gb|EFU14251.1| arginyl-tRNA synthetase [Enterococcus faecalis TX1342] Length = 563 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 78/289 (26%), Positives = 132/289 (45%), Gaps = 54/289 (18%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------ 370 KSDG+ Y DLA Y K Y+ F +YV+G++ S + K+L+AV Sbjct: 300 KSDGATLYITRDLAAALYRKRTYD--FAKSLYVVGNEQSNHFKQLKAVLKELGFDWSDDM 357 Query: 371 -----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 +S +K +I VLL E++ +++++ D V +VG Sbjct: 358 EHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAVTLAGNQINEKNPDLANREEVAKQVGV 416 Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 +V F L KN L +FDF V+ + + P YVQY +AR SI R+A Sbjct: 417 GAVIFHDL--KNDRLNNFDFVLDEVVRFEGETGP--YVQYTHARAMSILRKAN------- 465 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 F + + + D +++ L ++P + A EP +A + LA F+ ++ Sbjct: 466 ---FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEKYEPSVIAKHSIHLAQAFNKYY 522 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +H +R + + +K RL LV+AVA+++ L ++G+ +P EM Sbjct: 523 AH------VRILDEDAQK--EARLALVYAVATVLKEDLRLLGLHAPEEM 563 Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 37/159 (23%), Positives = 79/159 (49%), Gaps = 6/159 (3%) Query: 25 EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82 E+ +D+I ++E P+ HG ++ A L++ + P IA + +I + + + Sbjct: 17 EELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRIAPQQIAAELAEKID-GTNFEKIE 74 Query: 83 IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 + G ++N +++ + + ++ +V YG + G V I+ S N P+ +GH Sbjct: 75 VVGP-YLNFFMNKEAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMSSPNIAKPISMGHL 133 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 R V+G+++A ++ GY+ R ++ D G Q L ++ Sbjct: 134 RSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVA 172 >gi|229549355|ref|ZP_04438080.1| arginyl-tRNA synthetase [Enterococcus faecalis ATCC 29200] gi|255972063|ref|ZP_05422649.1| arginyl-tRNA synthetase [Enterococcus faecalis T1] gi|256956746|ref|ZP_05560917.1| arginyl-tRNA synthetase [Enterococcus faecalis DS5] gi|300860154|ref|ZP_07106241.1| arginine--tRNA ligase [Enterococcus faecalis TUSoD Ef11] gi|312953554|ref|ZP_07772391.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0102] gi|229305592|gb|EEN71588.1| arginyl-tRNA synthetase [Enterococcus faecalis ATCC 29200] gi|255963081|gb|EET95557.1| arginyl-tRNA synthetase [Enterococcus faecalis T1] gi|256947242|gb|EEU63874.1| arginyl-tRNA synthetase [Enterococcus faecalis DS5] gi|300849193|gb|EFK76943.1| arginine--tRNA ligase [Enterococcus faecalis TUSoD Ef11] gi|310628392|gb|EFQ11675.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0102] gi|315035945|gb|EFT47877.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0027] gi|315151966|gb|EFT95982.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0031] gi|315159299|gb|EFU03316.1| arginyl-tRNA synthetase [Enterococcus faecalis TX0312] Length = 563 Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 78/289 (26%), Positives = 132/289 (45%), Gaps = 54/289 (18%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------ 370 KSDG+ Y DLA Y K Y+ F +YV+G++ S + K+L+AV Sbjct: 300 KSDGATLYITRDLAAALYRKRTYD--FAKSLYVVGNEQSNHFKQLKAVLKELGFEWSDDM 357 Query: 371 -----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 +S +K +I VLL E++ +++++ D V +VG Sbjct: 358 EHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAVTLAGNQINEKNPDLANREEVAKQVGV 416 Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 +V F L KN L +FDF V+ + + P YVQY +AR SI R+A Sbjct: 417 GAVIFHDL--KNDRLNNFDFVLDEVVRFEGETGP--YVQYTHARAMSILRKAN------- 465 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 F + + + D +++ L ++P + A EP +A + LA F+ ++ Sbjct: 466 ---FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEKYEPSVIAKHSIHLAQAFNKYY 522 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +H +R + + +K RL LV+AVA+++ L ++G+ +P EM Sbjct: 523 AH------VRILDEDAQKEA--RLALVYAVATVLKEDLRLLGLHAPEEM 563 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 36/159 (22%), Positives = 78/159 (49%), Gaps = 6/159 (3%) Query: 25 EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82 E+ +D+I ++E P+ HG ++ A L++ P IA + + + + + Sbjct: 17 EELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRKAPQQIAAELAEKFD-GTNFEKIE 74 Query: 83 IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 + G ++N +++ + + ++ ++V YG + G V I+ S N P+ +GH Sbjct: 75 VVGP-YLNFFMNKEAVSQAVIGAVVKEKNNYGNSTFGNNGNVPIDMSSPNIAKPISMGHL 133 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 R V+G+++A ++ GY+ R ++ D G Q L ++ Sbjct: 134 RSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVA 172 >gi|258615933|ref|ZP_05713703.1| arginyl-tRNA synthetase [Enterococcus faecium DO] Length = 472 Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 113/475 (23%), Positives = 203/475 (42%), Gaps = 76/475 (16%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P+ HG ++ A L++ P IA + +I + + + + G ++N + Sbjct: 27 LLENPKSAEHGDVAF-PAFSLAKVYRKAPQQIAADLAEKID-SANFEKIEVVGP-YLNFF 83 Query: 93 LSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 ++ + +K+L ++V YG + IG V I+ S N P+ +GH R V+G+++ Sbjct: 84 MNKELISKKVLQTVVKEKEHYGDSNIGNQGTVPIDMSSPNIAKPISMGHLRSTVIGNSIG 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 +M GY+ R ++ D G Q L ++ W ++A+ P +Y++ Sbjct: 144 FIMEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGTEEAVKAE----PINELLRLYVQF-- 197 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQA--MMKIIRDD-LKALNIQHDIFISEDDFHR 267 E+A+ + LN W +++ +A + + RD+ +K N +D+ D Sbjct: 198 HEVAE--TEPELNEEARAWFKRLEEGDKEAIQLWQWFRDESMKEFNKIYDLLEVRFDSLN 255 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 G+ + +I+ L + + E K + D+ L P Sbjct: 256 GEAFYNDKMDEIVKLLEEKHLLNE-------DKGAEIVDLSAYDL------------NPA 296 Query: 325 L--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--------- 370 L KSDG+ Y DLA Y K Y+ F +YV+G++ S + K+L+AV Sbjct: 297 LIKKSDGATLYITRDLAAALYRKRTYD--FKQSLYVVGNEQSYHFKQLKAVLKEMGFDWS 354 Query: 371 --------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 +S +K +I VLL E++ ++S++ D V + Sbjct: 355 DDMHHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAIQSAKEQISEKNPDLENKDAVAKQ 413 Query: 417 VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG +V F L KN L FDF V+ + + P YVQY +AR S+ +A Sbjct: 414 VGVGAVIFHDL--KNDRLNTFDFNLEEVVRFEGETGP--YVQYTHARAVSLLEKA 464 >gi|87300835|ref|ZP_01083677.1| arginyl-tRNA synthetase [Synechococcus sp. WH 5701] gi|87284706|gb|EAQ76658.1| arginyl-tRNA synthetase [Synechococcus sp. WH 5701] Length = 610 Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 137/563 (24%), Positives = 218/563 (38%), Gaps = 116/563 (20%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYL 98 G N A+ L+R L P IA IV ++ +D + IAG GFINL L P L Sbjct: 47 GDFQANGALSLARRLKQAPRAIAGAIVEQLAVDTAFTELCEPAQIAGPGFINLTLRPRQL 106 Query: 99 RKILSSIVVSGIEYGRNLIG-----------KGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 L S G +G V ++F S N MHVGH R ++G Sbjct: 107 AAELRS------RLGDQRLGVPEVSGAATGAAAAPVIVDFSSPNIAKEMHVGHLRSTIIG 160 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS-DLPE--GYYPGV 204 D LA ++ F G+ V R ++ D G Q L + +AL D+ DL + +Y Sbjct: 161 DALARVLEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALTTADAVDLGDLVAFYRQA 220 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 + E S E + + P+ + + Q + + R + + + + DI +SE Sbjct: 221 KARFDADEAFQATSREEV-VKLQSGDPVSR-RAWQLLCEQSRREFQQIYDRLDIRLSE-- 276 Query: 265 FHRGDP--SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 RG+ +P + ++ +L G + + +C +F + G D Sbjct: 277 --RGESFYNPYLEQVVADLEASGLLV--------TDAGAQC-------VFLEGVSGKDGQ 319 Query: 322 R-PLL--KSDGSYTYFAADLAYFKCKYER-----GFDNMIYVMGSDHSGYVKRLEAVA-- 371 PL+ KSDG + Y DLA + ++ G +IYV + + + + VA Sbjct: 320 PLPLIVRKSDGGFNYATTDLAALRYRFAAPPEGDGARRLIYVTDAGQASHFAAVFQVARR 379 Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR-------------------- 411 A + ++ + LV+ DG K+ R+GD + L+ Sbjct: 380 AGWVPEGGRLEHVPFGLVQ-GDDGK--KLKTRSGDTVRLKDLLEEAVERAEADLRRRLAE 436 Query: 412 -----------HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460 HV VG +V++ L + F F ++ S N Y+ YA R Sbjct: 437 EERQEEEEFITHVATTVGLAAVKYADLSTNRNTNYQFSFDRMLALSG-NTAPYLLYALVR 495 Query: 461 CRSIFRQ---------AKDIFPD-LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 I R+ A +FPD L F PQE L L +AE +E Sbjct: 496 IAGIARKGGVGAGEGDAAGVFPDPLVFS------EPQEWALARQLLALDTVIAE----VE 545 Query: 511 NATIAQEPYKLAFYLYDLASVFH 533 + P +L YL++L+ VF+ Sbjct: 546 EELL---PNRLCSYLFELSQVFN 565 >gi|158321760|ref|YP_001514267.1| arginyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs] gi|254782938|sp|A8MKD9|SYR_ALKOO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|158141959|gb|ABW20271.1| arginyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs] Length = 587 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 130/612 (21%), Positives = 245/612 (40%), Gaps = 113/612 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 V +RP C N A+ ++ P+ IA ++ +K + + IAG GFIN+ Sbjct: 30 VSDRPDLC---QFQCNGALPAAKEYKKAPIQIANDLLPALKNVEIFEEITIAGPGFININ 86 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIG-----KGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 + S+L ++ + YG +G + + I++ AN P+HVGH R A++G Sbjct: 87 VKDSFLAAYVNEM------YGSEKLGLEEPAEPQTIIIDYGGANVAKPLHVGHLRAAIIG 140 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG---- 203 ++L + F G++V + ++ D G Q+ + + R Y ++S EG YP Sbjct: 141 ESLKRISRFVGHKVIGDVHLGDWGLQMGMVISELRRRSPHLPYFDES--YEGEYPAEAPF 198 Query: 204 -------VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV--QAMMKIIRDDLKA--- 251 +Y +D + E + + Y Q ++ + DLK Sbjct: 199 TIDELEDIYPAASKLAKSDAAAMEEAQQATAELQKGRRGYMALWQHILNVSVADLKKGYG 258 Query: 252 -LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV--YEGILPPPKSKTTQKCDMDRKQ 308 LN+ D++ E D + I ++D L + Y +G+L +K T Sbjct: 259 NLNVDFDLWNGESDCQK----YIDVMVDYLKKNNYTSFSDGLLIVDVAKETD-------- 306 Query: 309 LLFRSTMVGDDVDRP--LLKSDGSYTYFAADLAYFKCKYER----GFDNMIYVMGSDHSG 362 + V P +LK+DGS Y DLA +ER D +IYV+ Sbjct: 307 ---------NHVIPPFIVLKTDGSSLYSTTDLATI---WERVQDYDPDQIIYVVDKRQEL 354 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHV-------- 413 + +++ A + + + +DG P K R G + L+ + Sbjct: 355 HFEQVFRCAKKTKIAGEDLTLKFLGFGTMNGKDGKPFKT--REGGVMRLQDLIQIIKDAV 412 Query: 414 --------------VDE----VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYV 454 VDE VG ++++ L + ++ FD + + P Y+ Sbjct: 413 YNKLQENEAIDPSEVDEISRKVGLAALKYGDLSNQITKDYVFDIDRFASFEGNTGP--YI 470 Query: 455 QYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513 Y R +SI R+ A + F D P + + E L++ L+ + +E + Sbjct: 471 LYTIVRIKSILRRIAAEGFQASDKIGVPHSDV---------ERSLLLKLSRFNETVEFSF 521 Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573 + P ++ Y+YDLA+ F+ + + F + ++ + L+ +++ + Sbjct: 522 VNHSPNRICDYIYDLANTFNKFYHDTKIISETEFEKKSS------WINLITLTMNVLETC 575 Query: 574 LNIIGVESPNEM 585 L ++G+E+P +M Sbjct: 576 LELLGIEAPEKM 587 >gi|308158755|gb|EFO61320.1| Arginyl-tRNA synthetase [Giardia lamblia P15] Length = 621 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 122/548 (22%), Positives = 213/548 (38%), Gaps = 71/548 (12%) Query: 78 VDSVFIAGKGFINLYLSPSYLRK----ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPT 133 +++V IAG FIN+ L+P YL I ++ + L GK V ++F S N Sbjct: 105 IEAVNIAG-SFINIVLTPEYLLSKCFDIYMAVPFGALPKPPTLPGKC--VAVDFSSPNVA 161 Query: 134 GPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND 193 MHVGH R ++GD++ L + Y+V R ++ D G Q L Y D Sbjct: 162 KSMHVGHLRSTIIGDSICRLYEYVKYKVHRINHVGDWGTQFGML----------ITYLTD 211 Query: 194 SDLPEGYYPGVYLKHVG----KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249 PE + K + L Y F + P + + +A++K+ R +L Sbjct: 212 MH-PEIADAAAHCKRITMLPIDNLVAFYKKAKERFDSD---PDFQKRAYEAVVKLQRLNL 267 Query: 250 KALNIQHDIF-ISEDDFHR-GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307 + + I IS +F R D I+ ID Y ++ + K M K Sbjct: 268 AEFYLWYKICDISRHEFQRIYDRLDIK--IDEFGESSYKFKLGTTVARLKRLHLTQMSDK 325 Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA--YFKCKYERGFDNMIYVMGSDHSGYVK 365 + + G D ++KSDG +TY D+A Y + + D +YV+ + S + Sbjct: 326 ATVI--PIEGMDYPLIIVKSDGGFTYDTTDMAAIYHRTQVLHA-DKCVYVVDAGQSSHFD 382 Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425 + A V + V L DG +K RAG+ + L ++DE ++S+R + Sbjct: 383 LVFKAAEKAGWITKNQAVHVPFGVVLGNDGKRLKT--RAGETVKLEDLLDEAVTESMRLL 440 Query: 426 MLWRKNSELLDFDFCKVKEQS----------------------------KENPVFYVQYA 457 ++ E + +V E K N Y+ Y+ Sbjct: 441 EERNRDQEFSQEEMRRVAEAVGYGAVKYADLSSHRIKDYKYDPKRMLNLKGNTAAYLLYS 500 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 + R SI R+A +L+ + + S D SE+ L+V L + I Sbjct: 501 FTRISSICRKAGVNRE----ELYTSDTLKNLSITDPSEINLLVALLKVHDTILFTLEDLC 556 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 P+++ ++Y +AS + + R + ++ + RL L + +++ Sbjct: 557 PHRICDWVYSVASAYTDFYEKCR---VIETSESGDSICNKSRLALCEMTRQSLRLAFHLL 613 Query: 578 GVESPNEM 585 G+ + M Sbjct: 614 GIREIDRM 621 >gi|195392491|ref|XP_002054891.1| GJ22551 [Drosophila virilis] gi|194152977|gb|EDW68411.1| GJ22551 [Drosophila virilis] Length = 571 Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 112/497 (22%), Positives = 196/497 (39%), Gaps = 74/497 (14%) Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V +E+ S N P HVGH R ++G+ LA+L GY TR Y+ D G Q LAL V Sbjct: 115 VVVEYSSPNIAKPFHVGHLRSTIIGNVLANLHQHLGYRTTRLNYLGDWGTQFGLLALGV- 173 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW--LPIVKDYSVQA 240 Q +D+ + +Y +V A +L E + L KD ++ Sbjct: 174 ----QLSNVHDAQMRAAPIETLYNAYVTANKAAAADPQLAQQARELFSALEAGKDTTMSK 229 Query: 241 MMKIIR----DDLKA----LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 + R ++L L + D + E + + RDI+D L + G+L Sbjct: 230 QWEQYRQYTIEELTGVYERLGVHFDSYEWESQYSQ------RDIVDVLTQ--LRTAGLLQ 281 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDN 351 + R +V D P++KSDGS Y A D+A + +R F Sbjct: 282 REEDG--------------REIVVVDQRRVPVIKSDGSTLYLARDIAALLERQQRLRFSR 327 Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEK-----------------KAQINVL-----LCELV 389 M+YV+ + + + K L +A+ ++ Q N + L E Sbjct: 328 MLYVVDNGQADHFKALFQTVSALDDRFNDKLQHVKFGRIHGMSTRQGNAIFLRDVLNEAR 387 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 + R+ I + + + + HV D +G +V +L ++ +F + + + + + Sbjct: 388 DVMREKRSISTTTKVNNTLDDDHVCDILGVSAVLVNVLKQRRQRDYEFSWQQALQVNGDT 447 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDF-DLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 + +QY + R ++ D F ++ ++ P E D L L+ LA + + Sbjct: 448 GI-KLQYTHCRLHNLL----DNFKHIELAEVKPSWQHLTEEPADA--LALLYELARFEQC 500 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 I A E + YL+ L + + R RL Q + RL L A Sbjct: 501 IWQAKEQLEACVVVNYLFGLCN------ATSRALKRLPVKQEKCPEKQRQRLLLFRAAKR 554 Query: 569 IINSGLNIIGVESPNEM 585 + G+ ++G++ N+M Sbjct: 555 TLQQGMQLLGLKPLNQM 571 >gi|153814087|ref|ZP_01966755.1| hypothetical protein RUMTOR_00296 [Ruminococcus torques ATCC 27756] gi|145848483|gb|EDK25401.1| hypothetical protein RUMTOR_00296 [Ruminococcus torques ATCC 27756] Length = 585 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 117/617 (18%), Positives = 240/617 (38%), Gaps = 98/617 (15%) Query: 21 KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80 K +K++ + RP C + N AM ++ P IAE + +K ++ Sbjct: 15 KAGYDKELAKVTLSNRPDLCEY---QCNGAMAGAKKYKKAPFMIAEDVAVYLKESSYFET 71 Query: 81 VFIAGKGFINLYLSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMH 137 V + GFINL L+P + L+ + + G+E + + I++ N P+H Sbjct: 72 VEVVKPGFINLKLAPQSVADYLNQMSETEKLGVEEAE----EPKTIMIDYGGPNVAKPLH 127 Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP 197 VGH R A++G+++ + F G +V + ++ D G Q+ + + R + Y +++ Sbjct: 128 VGHLRSAIIGESVKRITRFKGNKVIGDIHLGDWGYQMGLIITELKKRKPELPYFDENFT- 186 Query: 198 EGYYPGVYLKHVGK-----ELADKYSSELLNFPEE------------KWLPIVKDYSVQA 240 G YP +G+ A Y+ E + +E + V ++ + Sbjct: 187 -GEYPAEAPFTIGELEEIYPTASSYAKEDEEYRKEALHATYLLQNGHRGYRAVWNHIMNV 245 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 + ++ + + LN++ D++ E D + P D++ L +GY Sbjct: 246 SVTDLKKNYERLNVEFDLWKGEADAQKYIP----DMVQMLKEEGY--------------- 286 Query: 301 KCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYERGF--DNMIYV 355 D L+ D + P +LKSDG+ Y DLA + E + D +IYV Sbjct: 287 -ARYDEGALVVDVQEESDKKEVPPCMILKSDGAALYDTTDLATL-VQREEDYQPDEVIYV 344 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVV 414 + + ++ A + + +DG P K R G + L +++ Sbjct: 345 VDKRQELHFTQVFRCAKKTGIVSPNTRLEFLGFGTMNGKDGKPFKT--REGGVMRLENLI 402 Query: 415 DEVGSDSVRFMMLWRKNSE-----------LLDFDFCKVKEQSKENPVF----------- 452 E+ + + +M R E L + + Q+ ++ +F Sbjct: 403 REINDEMYKKIMDNRTVEEEEAKKTARIVGLAAIKYGDLSNQAGKDYIFDVDRFTSFEGN 462 Query: 453 ---YVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 Y+ Y R +SI + K+ + + P + E L++ + ++ V Sbjct: 463 TGPYILYTIVRIKSILAKYKENGGSAEKLSIRPSG--------NVYEKALMLQVLKFNDV 514 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 E P+KL Y+Y++A+ F+ + + + + + + L+ Sbjct: 515 FEAVCEETAPHKLCAYIYEIANEFNKFYHE------TKILSEEDEEKRSGYIALLGLTKR 568 Query: 569 IINSGLNIIGVESPNEM 585 ++ + ++++G E+P M Sbjct: 569 VLETCIDLLGFEAPERM 585 >gi|332797060|ref|YP_004458560.1| arginyl-tRNA synthetase [Acidianus hospitalis W1] gi|332694795|gb|AEE94262.1| arginyl-tRNA synthetase [Acidianus hospitalis W1] Length = 623 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 71/284 (25%), Positives = 128/284 (45%), Gaps = 40/284 (14%) Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 L++SDG+ Y D+AY K+ + D +I V+ S +L A + KK IN Sbjct: 358 LMRSDGTTLYTVRDIAYTIYKFRQFNADEVINVIAEQQSVPQMQLRAALYILGWKKFAIN 417 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG---------------------SDS 421 ++ + GM KMS R G +I+L V D+V + + Sbjct: 418 LIHFSYGMVTLQGM--KMSGRLGKYISLDEVYDKVAEVVKAKIEEKKGILENLNEIVNSA 475 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 +R+ ++ ++ + FD +V +EN Y+QY YAR +I ++ + +LD Sbjct: 476 IRYAIISVSANKPVSFDVKRVA-NFEENSGPYLQYTYARAYNILSKSTE---NLDISKI- 530 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 E+E + L++ +A++P + N+ +P L +L LA VF+ + Sbjct: 531 -----DENELKNEKRTLLLMIAKFPDIFINSVDHLQPEVLTVFLRGLADVFNSWYD---- 581 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R +Q + + RL +V V +++ +GLN +G+ S M Sbjct: 582 --KERVLQEPDESKRITRLFIVKGVETVLRNGLNTLGIASLTRM 623 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/91 (37%), Positives = 54/91 (59%), Gaps = 4/91 (4%) Query: 88 FINLYLSPSYLRKILSSIVVSGIE-YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 FIN L+ +++L I + E YG + ++ +E SANP P+H+GH R A++ Sbjct: 74 FINARLNE---KELLKEIFTNFSENYGIIKTERPLRIVVEHTSANPIHPLHIGHLRNAIL 130 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTL 177 GDTLA ++ G+EV +Y+ND+G Q+ L Sbjct: 131 GDTLAKMLKARGHEVNVRFYVNDSGRQVALL 161 >gi|325107026|ref|YP_004268094.1| arginyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305] gi|324967294|gb|ADY58072.1| Arginyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305] Length = 654 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 13/141 (9%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N AM L++ LG P +A IV ++ + IAG GFINL L L L Sbjct: 38 GDYQANCAMPLAKQLGKKPRDVATEIVEKLDVADLCAPPDIAGPGFINLKLRSDVLASQL 97 Query: 103 SS------IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 + + V+ +E N++ ++F S N PMHVGH R V+GD L +++F Sbjct: 98 EAALNDDRVGVAAVENPENVV-------LDFSSPNVAKPMHVGHLRSTVIGDALYRILSF 150 Query: 157 SGYEVTREYYINDAGAQINTL 177 G++VT + ++ D G Q + Sbjct: 151 LGHKVTSDNHVGDWGTQFGMI 171 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 69/294 (23%), Positives = 114/294 (38%), Gaps = 49/294 (16%) Query: 326 KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 K DG+YTY DLA + + E ++YV+ S + + L A K + Sbjct: 376 KQDGAYTYATTDLATIQYRATEWEAKKILYVVDKRQSEHFQLLFETAKLWGYNKIDFRHI 435 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------- 416 V + +D P K R+GD I L ++DE Sbjct: 436 SFGTV-MGKDNKPYKT--RSGDIIGLGSLLDEAVSRARTVVDSNDDSKPNGPELSEEERQ 492 Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VG S+++ L FD+ K+ + + Y+QYA+AR IFR+A Sbjct: 493 QIAEIVGIGSIKYADLHHNRDSDYVFDWDKMISMTGDTAA-YMQYAFARVCGIFRKAGVT 551 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 + D + P + +E L + LA + + N T+ P L YL+D+A+ Sbjct: 552 REQMRMD----DECPLQLTH-PAERALGIQLARFEEALTNVTVEYRPNLLTGYLFDVANA 606 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + + + + + R +L AS I GL ++G+E+ M Sbjct: 607 FSSFYD------KCPVSAEPSDAIRISRFKLCDLTASTIQRGLELLGIETSPRM 654 >gi|224537594|ref|ZP_03678133.1| hypothetical protein BACCELL_02474 [Bacteroides cellulosilyticus DSM 14838] gi|224520791|gb|EEF89896.1| hypothetical protein BACCELL_02474 [Bacteroides cellulosilyticus DSM 14838] Length = 605 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 141/628 (22%), Positives = 254/628 (40%), Gaps = 122/628 (19%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 ++ +++ + GHL+ L R P A+ I +K + + F KGF+N Sbjct: 27 QVQLQKTKKEFEGHLTLVVFPFL-RMSKKGPEQTAQEIGEYLKANEPSIAAFNVIKGFLN 85 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDT 149 L ++ S ++L+ I V +YG + V IE+ S N P+H+GH R ++G+ Sbjct: 86 LTIASSAWIELLNDIHVDK-QYGIVAATDNSPLVMIEYSSPNTNKPLHLGHVRNNLLGNA 144 Query: 150 LASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRYQQALYNN-DSDLPEGYYPGVYL 206 LA+++ +G +V + +ND G I + LA S + + + D G Y + Sbjct: 145 LANIVMANGNKVVKTNIVNDRGIHICKSMLAWSKYGNGETPESSGKKGDHLVGDYYVAFD 204 Query: 207 KHVG---KELADKYSSE----------------LLNFPEE---KWLPIVKDYSVQAMMKI 244 KH KEL K+ SE L+N E KW D V+A+ Sbjct: 205 KHYKAEVKELMAKFQSEGATEEEAKAKAEAASPLMNEAREMLVKWE--ANDPEVRALWA- 261 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY-EGILPPPKSKTTQKCD 303 K N ++ F ++ +H+ S D + + Y EG K K + + Sbjct: 262 -----KMNNWVYEGF--DETYHKMGVS-----FDKIYYESNTYLEG-----KEKVMEGLE 304 Query: 304 MDRKQLLFR-------STMVGDDVDRPL-LKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354 K ++ + + + +D L L++DG+ Y D+ K ++ + D MIY Sbjct: 305 ---KGFFYKKEDGSVWADLTAEGLDHKLLLRADGTSVYMTQDIGTAKLRFADYPIDKMIY 361 Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414 V+G++ + + + L + + + + V + +G KM R G + ++ Sbjct: 362 VVGNEQNYHFQVLSILLDKLGFEWGKSLVHFSYGMVELPEG---KMKSREGTVVDADDLM 418 Query: 415 DE-----------------------------VGSDSVRFMML---WRKN-----SELLDF 437 +E VG ++++ +L RKN E +DF Sbjct: 419 EEMISTAKETSNELGKLDGLSQEEADNIARIVGLGALKYFILKVDARKNMTFNPKESIDF 478 Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ 497 + N ++QY YAR +S+ R+A + + P IP E E Sbjct: 479 N---------GNTGPFIQYTYARIQSVMRKAAEAGI-----VIPAE-IPVGIELSEKEEG 523 Query: 498 LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM 557 LI +A++ V++ A P +A Y YDL ++ + ++ N + + Sbjct: 524 LIQMVADFAAVVKQAGTDYSPSIIANYTYDLVKEYNQFYHD------FSILREENEAVKV 577 Query: 558 MRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L VA ++ + ++GVE P+ M Sbjct: 578 FRLALSENVAKVVRISMGLLGVEVPDRM 605 >gi|317499896|ref|ZP_07958132.1| arginine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA] gi|331087881|ref|ZP_08336806.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA] gi|316898613|gb|EFV20648.1| arginine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA] gi|330409576|gb|EGG89017.1| arginyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA] Length = 588 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 117/617 (18%), Positives = 240/617 (38%), Gaps = 98/617 (15%) Query: 21 KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDS 80 K +K++ + RP C + N AM ++ P IAE + +K ++ Sbjct: 18 KAGYDKELAKVTLSNRPDLCEY---QCNGAMAGAKKYKKAPFMIAEDVAVYLKESSYFET 74 Query: 81 VFIAGKGFINLYLSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMH 137 V + GFINL L+P + L+ + + G+E + + I++ N P+H Sbjct: 75 VEVVKPGFINLKLAPQSVADYLNQMSETEKLGVEEAE----EPKTIMIDYGGPNVAKPLH 130 Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLP 197 VGH R A++G+++ + F G +V + ++ D G Q+ + + R + Y +++ Sbjct: 131 VGHLRSAIIGESVKRITRFKGNKVIGDIHLGDWGYQMGLIITELKKRKPELPYFDENFT- 189 Query: 198 EGYYPGVYLKHVGK-----ELADKYSSELLNFPEE------------KWLPIVKDYSVQA 240 G YP +G+ A Y+ E + +E + V ++ + Sbjct: 190 -GEYPAEAPFTIGELEEIYPTASSYAKEDEEYRKEALHATYLLQNGHRGYRAVWNHIMNV 248 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 + ++ + + LN++ D++ E D + P D++ L +GY Sbjct: 249 SVTDLKKNYERLNVEFDLWKGEADAQKYIP----DMVQMLKEEGY--------------- 289 Query: 301 KCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYERGF--DNMIYV 355 D L+ D + P +LKSDG+ Y DLA + E + D +IYV Sbjct: 290 -ARYDEGALVVDVQEESDKKEVPPCMILKSDGAALYDTTDLATL-VQREEDYQPDEVIYV 347 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVV 414 + + ++ A + + +DG P K R G + L +++ Sbjct: 348 VDKRQELHFTQVFRCAKKTGIVSPNTRLEFLGFGTMNGKDGKPFKT--REGGVMRLENLI 405 Query: 415 DEVGSDSVRFMMLWRKNSE-----------LLDFDFCKVKEQSKENPVF----------- 452 E+ + + +M R E L + + Q+ ++ +F Sbjct: 406 REINDEMYKKIMDNRTVEEEEAKKTARIVGLAAIKYGDLSNQAGKDYIFDVDRFTSFEGN 465 Query: 453 ---YVQYAYARCRSIFRQAKDIFPDLD-FDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 Y+ Y R +SI + K+ + + P + E L++ + ++ V Sbjct: 466 TGPYILYTIVRIKSILAKYKENGGSAEKLSIRPSG--------NVYEKALMLQVLKFNDV 517 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 E P+KL Y+Y++A+ F+ + + + + + + L+ Sbjct: 518 FEAVCEETAPHKLCAYIYEIANEFNKFYHE------TKILSEEDEEKRSGYIALLGLTKR 571 Query: 569 IINSGLNIIGVESPNEM 585 ++ + ++++G E+P M Sbjct: 572 VLETCIDLLGFEAPERM 588 >gi|300776117|ref|ZP_07085976.1| arginine--tRNA ligase [Chryseobacterium gleum ATCC 35910] gi|300505250|gb|EFK36389.1| arginine--tRNA ligase [Chryseobacterium gleum ATCC 35910] Length = 586 Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 129/591 (21%), Positives = 233/591 (39%), Gaps = 108/591 (18%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112 L + L +P +I + + ++ F KGF+N+ + S+ E Sbjct: 46 LVKQLKKNPESIGVELGEALTEQTELFESFNVVKGFLNVKVKNQLFVDNFRSVS----EN 101 Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172 + K V +E+ S N P+H+GH R ++G ++A ++ +GY+V + IND G Sbjct: 102 FSTIEKKNATVMVEYSSPNTNKPLHLGHIRNNLLGFSVAQILKEAGYDVIKTQIINDRGI 161 Query: 173 QI--NTLALSVFWRYQQ-ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229 I + LA F + N D G Y + K+ KE+A+ + +K Sbjct: 162 HICKSMLAWEKFGNGETPETANTKGDKFVGNYYVEFDKNYKKEIAELVEQGVGEEQAKKE 221 Query: 230 LPIVK------------DYSVQAMM--------KIIRDDLKALNIQHDIFISEDDFHRGD 269 P++K D V+A+ K + K L + D E + + Sbjct: 222 APVMKEAQKMLLDWENGDEKVRALWAEMNSWVYKGFNETYKRLGVDFDQVQYESNTYILG 281 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 I++ +D +G +Y+ K + CD+ T G D + LL+SDG Sbjct: 282 KDLIQEGLD----KGVLYQ------KEDGSVWCDL---------TDEGLD-QKLLLRSDG 321 Query: 330 SYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCE 387 + Y DL ++++ +IY +G++ + + L + + E Q+ L Sbjct: 322 TSVYMTQDLGTAVERFKQNDIQKLIYTVGNEQDYHFQVLFKILKKLGYEWADQLYHLSYG 381 Query: 388 LVRL------YRDGMPI--------------KMSKRAGDFITLRHVVDE-----VGSDSV 422 +V L R+G + ++ G TL E VG ++ Sbjct: 382 MVELPEGKMKSREGTVVDADDLMQEMYETAKSKAQELGKLETLSEEEKEASYETVGLGAL 441 Query: 423 RFMMLW---RKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 ++ ML +K +E +DF+ N ++QY YAR +S+ +A + + Sbjct: 442 KYFMLKVDPKKKMLFNPAESIDFN---------GNTGPFIQYTYARIQSLLSKAGALQAE 492 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 E E + SE +LI+ LA + V+ + P +A Y+YDL ++ Sbjct: 493 -----------TAEIELNQSEKELIMQLANFKTVVAKSAETLSPALVANYVYDLVKTYNS 541 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + NP L + K+ RL + A I L ++G+ + N M Sbjct: 542 FYQN---NPILN---QEDEKIKQFRLNISDITAKTIKKSLELLGIGTVNRM 586 >gi|302802969|ref|XP_002983238.1| hypothetical protein SELMODRAFT_155706 [Selaginella moellendorffii] gi|300148923|gb|EFJ15580.1| hypothetical protein SELMODRAFT_155706 [Selaginella moellendorffii] Length = 536 Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 126/565 (22%), Positives = 221/565 (39%), Gaps = 95/565 (16%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P IA+ I V++ +AG GFIN+ LS Y+ K L+ +++ GI+ ++ Sbjct: 16 NPREIAQSITRNFPQTGFVETTSVAGPGFINVKLSSVYIAKRLNELLLHGIDTWAPVLPV 75 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 + ++F S N MHVGH R ++GD LA+++ + EV R ++ D G Q L Sbjct: 76 KRAI-VDFSSPNIAKEMHVGHLRSTIIGDCLANMIEYCKVEVLRRNHVGDWGTQFGMLIE 134 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK----D 235 +F + + + D G Y + + AD+ F + +VK D Sbjct: 135 YLFEMFPN--WEDIGDQAIGDLQAFYKESKVRFDADE------EFKAKAQQAVVKLQSGD 186 Query: 236 YSVQAMMKII----RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291 +A KI+ R++ + + + + + E +P I D I L +G + E Sbjct: 187 AKYRAAWKILCNISRNEFQQVYDRLKVSLEEKGESFYNPY-IPDAIQILRDKGILEES-- 243 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA--YFKCKYERGF 349 D ++F + G + +K DG + Y + DLA +++ E+ Sbjct: 244 -------------DGATVIF---VDGHKIPLIAIKRDGGFNYASTDLAALWYRLNVEK-V 286 Query: 350 DNMIYVMG-SDHSGY------VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402 + +IYV H + KR E + + + L L DG + + Sbjct: 287 EWIIYVTDVGQHQHFDMFFKAAKRAEWLPKEGYPRTQHVGFGLV----LGTDGKRFRTRQ 342 Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL--DFD------------FCKVKEQSKE 448 G + L ++DE S S ++ ++ E D D + +K + Sbjct: 343 GTG-LVRLVDLLDEAKSRSKTALIERGRDDEWSPEDLDAAAESVGYGAVKYADLKNNRET 401 Query: 449 NPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494 N F Y+ YAYAR RSI R++ +L + P E Sbjct: 402 NYTFSFEQMLDVRGNTAVYLLYAYARIRSIIRKSGKSIDELKENGAIVLTHPDER----- 456 Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554 L + L ++ V+E+A P L YLY+L+ F ++ + N Sbjct: 457 --ALGLFLIQFSEVVEDAVTRLLPNTLCEYLYNLSENFTRFYTS---------CKVNGSP 505 Query: 555 LTMMRLQLVHAVASIINSGLNIIGV 579 RL L A A ++ ++G+ Sbjct: 506 EETSRLLLCEATAIVMKQCFKLLGI 530 >gi|123967742|ref|YP_001008600.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. AS9601] gi|123197852|gb|ABM69493.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. AS9601] Length = 604 Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 144/636 (22%), Positives = 246/636 (38%), Gaps = 130/636 (20%) Query: 23 KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE----LIVARIKIDPDV 78 K E +IL + +I + G N + LS+ +P I+ L+ +I Sbjct: 26 KGEFEILRKNLITQSSKEEFGDYQCNVCLSLSKIYKKNPRDISNDFINLLNKNKRISKLC 85 Query: 79 DSVFIAGKGFINLYLSPSYL-RKILSSIVV--SGIEYGRNLIGKG--TKVNIEFVSANPT 133 S+ IAG GFIN+ L L +I S+I +GI R + G KV ++F S N Sbjct: 86 KSLEIAGPGFINIKLKDEVLINEIKSNIQCNRAGIPLIRKDLESGLSNKVIVDFSSPNIA 145 Query: 134 GPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND 193 MHVGH R ++GD+++ + GYEV R ++ D G Q L + + LY+ND Sbjct: 146 KEMHVGHLRSTIIGDSISRIFELRGYEVLRLNHVGDWGTQFGMLITQL-----KDLYSND 200 Query: 194 SDLPEGYYPGVYLKHVGK----ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249 L+ +GK +L + Y F E + S + ++K+ D+ Sbjct: 201 ------------LEEIGKIKISDLVEFYKESKKRFDNESEF---QKRSREEVVKLQSGDI 245 Query: 250 KALN---------------IQHDIFISEDDFHRGDPSP-IRDIIDNLARQGYVYEGILPP 293 K++ I ++ I ++ +P ++ +ID+L + + E Sbjct: 246 KSIKAWKLLCDQSRKEFDEIYKNLKIKIEERGESFYNPFLKSVIDDLNLEKILVED---- 301 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL----LKSDGSYTYFAADLAYFKCKYER-- 347 KC +F M + +PL K DG + Y DLA + ++ + Sbjct: 302 ----QGAKC-------VFLDGMTNKE-GKPLPLIIQKKDGGFNYATTDLAAIRYRFNKPP 349 Query: 348 -GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK-----AQINVLLCELVRLYRDGMPIKMS 401 G D + +DH G V + K Q++ + LV+ DG +K Sbjct: 350 NGDDASRIIYVTDH-GQANHFAGVFQVAKKAKWIPENCQVDHVPFGLVQGI-DGKKLKT- 406 Query: 402 KRAGDFITLRHVVDE-------------------------------VGSDSVRFMMLWRK 430 R G I L+ +++E +G +V++ L + Sbjct: 407 -REGKTIRLKDLLNEAVRRAKEDLLKRLEDEDRYETEEFIANTSRIIGLGAVKYADLSQN 465 Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490 F F K+ + N Y+ Y R I R+ ++ DF Q Sbjct: 466 RITNYQFSFDKMLSLNG-NTAPYLLYTLVRILGIKRKNNFVYDSKDF---------QYVN 515 Query: 491 FD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549 ++ SE +LI L ++ VI + P +L YL++L F+ + P L+ Sbjct: 516 YEHKSEWKLIRKLLKFDEVIISIEKDLMPNRLCNYLFELCQTFNRFYDQV---PILK--- 569 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + RL L A + L I+G+E+ M Sbjct: 570 -EEKNIKISRLNLCDLTAKTLKLSLEILGIETLERM 604 >gi|302757685|ref|XP_002962266.1| hypothetical protein SELMODRAFT_76727 [Selaginella moellendorffii] gi|300170925|gb|EFJ37526.1| hypothetical protein SELMODRAFT_76727 [Selaginella moellendorffii] Length = 578 Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 131/579 (22%), Positives = 231/579 (39%), Gaps = 101/579 (17%) Query: 48 NAAMILSRPLGL-----DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 NA I SR G+ +P++IA+ ++ I + +AG G+IN+ LS ++ + L Sbjct: 48 NAMGIWSRIKGMQSTYGNPVSIAQDVLRNIPRTSLFEKTSVAGAGYINVTLSARFIAERL 107 Query: 103 SSIVVSGIE-YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161 ++++ G++ L K V+ F S N +HVGH R V+GD++A ++ F V Sbjct: 108 TTVLHQGVDALAPELPVKHALVD--FSSPNIAKELHVGHLRSTVIGDSVARMLEFCNVSV 165 Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221 R ++ D G Q L +F A DL + Y E ++++ S+ Sbjct: 166 MRRNHVGDWGTQFGMLLEHIF--ETGAEVEGIGDLQKMYV----------EASERFKSD- 212 Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NL 280 K + Q ++K+ R + + H + S D R ++ +L Sbjct: 213 ---------EQFKAKAQQGVVKLQRSEAE----YHAKWKSLCDVSRRAYERTYGRLNVSL 259 Query: 281 ARQG-YVYEGILPPPKSKTTQKC---DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336 +G Y +P +K + D +++F + G D+ + K+DG+ TY Sbjct: 260 EEKGESFYHPYIPYAIKALEEKGLLQESDGARVIF---LEGYDIPLIVTKTDGAITYATT 316 Query: 337 DLA--YFKCKYERGFDNMIYVM---------------------------GSDHSGYVKRL 367 DLA +++ E+ + +IYV + H G+ L Sbjct: 317 DLAALWYRVHVEKA-EWIIYVTDVGQKQHFDMFFQAAKLAGWLPEHGFPKAQHIGFGMVL 375 Query: 368 EAVAAAVSEKKAQINVLLCELV--RLYRDGMPIKMSKRAGDFIT--LRHVVDEVGSDSVR 423 + +K VLL L+ R + R G++ L + +G +V+ Sbjct: 376 GEDGKRIRGRKG--GVLLANLLDDAKSRSHKELIERGRKGEWSGQDLEAAAEALGYGAVK 433 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + L FDF ++ + K N Y+ YAYAR SI R++ + Sbjct: 434 YADLKNNRETNYRFDFDQMLD-IKGNTAVYLFYAYARVCSIIRKSGRSIDE--------- 483 Query: 484 VIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 I Q E E L +HL ++ +E++ P L YLY L+ +F ++ + Sbjct: 484 -IKQICELVVEHPHERSLGLHLIQFTETVEDSISRLLPSTLCDYLYTLSELFTQFYTSCK 542 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 N L+ RL L A I+ GL ++G+ Sbjct: 543 VNGSLQ---------EASRLLLCEAARLIMKQGLELLGL 572 >gi|195110603|ref|XP_001999869.1| GI24765 [Drosophila mojavensis] gi|193916463|gb|EDW15330.1| GI24765 [Drosophila mojavensis] Length = 571 Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 118/501 (23%), Positives = 194/501 (38%), Gaps = 82/501 (16%) Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V +E+ S N P HVGH R ++G+ LA+L GY TR Y+ D G Q LAL V Sbjct: 115 VVVEYSSPNIAKPFHVGHLRSTIIGNVLANLHQHLGYRTTRLNYLGDWGTQFGLLALGV- 173 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW--LPIVKDYSVQA 240 Q +D + E +Y +V A +L E + L D ++ Sbjct: 174 ----QLGSISDDRIREAPIETLYNAYVMANKAAAEDPQLAQRARELFTSLEANTDPTLSC 229 Query: 241 MMKIIR----DDLKA----LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 + R D+L L + D + E + + D I D++ L G + Sbjct: 230 EWQKYRQYTIDELTGMYDRLGVHFDSYEWESQYSQRD---IGDVLTQLRSAGLL------ 280 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDN 351 +++ R +V D+ P++KSDGS Y A D+A + R F Sbjct: 281 -------------QREHDGREIVVVDERRVPVIKSDGSTLYLARDIAALLERQRRLQFTR 327 Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 M+YV+ + + + L + A A ++ L + ++ + G MS R G + LR Sbjct: 328 MLYVVDNGQADHFNALFSTATA-------LDASLKDKLQHVKFGRIRGMSTRQGKAVFLR 380 Query: 412 HVVDEVGS--DSVRFMMLWRK-NSELLDFDFCKV-----------KEQSKENPVFYVQYA 457 V++E RF K NS L D C + K++ + + F Q A Sbjct: 381 DVLNEARDVMREKRFASATTKANSTLNDEHVCDILGVSAVLVNVLKQRRQRDHEFSWQQA 440 Query: 458 ------------YARCRSIFRQAKDIFPDLDF-DLFPRNVIPQESEFDTSELQLIVHLAE 504 Y CR + F D++ ++ P +E + L ++ LA Sbjct: 441 LQVNGDTGIKLQYTHCR--LHNLLERFGDIELAEIKPS--WQHLTEEPSDALAVLYELAR 496 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 + + + A E + L YL+ L + + R RL Q RL L Sbjct: 497 FDQCVWQAKEQLEAHVLVNYLFGLCN------ATSRALKRLPVKQEKCPDKQSQRLLLFR 550 Query: 565 AVASIINSGLNIIGVESPNEM 585 A + G+ ++G++ N+M Sbjct: 551 AAKRTLQQGMRLLGLKPLNQM 571 >gi|194476818|ref|YP_002048997.1| arginyl-tRNA synthetase [Paulinella chromatophora] gi|171191825|gb|ACB42787.1| arginyl-tRNA synthetase [Paulinella chromatophora] Length = 602 Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 56/159 (35%), Positives = 74/159 (46%), Gaps = 9/159 (5%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSV----FIAGKGFINLYLSP--- 95 G N + LS+ LG P IA +V + P + IAG GFINL L P Sbjct: 47 GDFQVNGPLALSKILGKPPRKIATDLVNALLAIPSFSELCSPPIIAGPGFINLVLKPELL 106 Query: 96 -SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154 S +RK+LS+ + G+ V I+F S N MHVGH R ++GD LA ++ Sbjct: 107 KSEIRKVLSNPNI-GVPNVTETEDHLFPVIIDFSSPNIAKDMHVGHLRSTLIGDCLARIL 165 Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND 193 F GY V R ++ D G Q L + QAL N D Sbjct: 166 EFRGYNVLRLNHVGDWGTQFGMLITHLKQVAPQALINPD 204 Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust. Identities = 64/298 (21%), Positives = 116/298 (38%), Gaps = 58/298 (19%) Query: 326 KSDGSYTYFAADLAYFKCKYERGFDN-----MIYVMGSDHSGYVKRLEAVA--AAVSEKK 378 KSDG + Y DLA + ++ F+ ++YV S + + + +A A Sbjct: 325 KSDGGFNYATTDLAAIRYRFGVIFEGDGASRIVYVTDSGQANHFAGIFQIARRAGWVPTN 384 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 ++ + LV+ +DG K+ RAGD + L+ ++DE Sbjct: 385 GRLEHVPFGLVQ-GQDGK--KLKTRAGDTVRLKDLLDEAIERADIDLRKRLAEENRSEEE 441 Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467 VG +V++ L + F+F ++ + N Y+ YA R I R+ Sbjct: 442 IFIKDVSKKVGIAAVKYADLSQNRITSYQFNFDRMLSLNG-NTAPYLLYAMVRIAGILRK 500 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 + L+ L I E L+ H+ + +I P +L YL++ Sbjct: 501 SSKQHDTLEKQLHFSEPI---------EWALVRHILRFDLIIIEVEEELLPSRLCSYLFE 551 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L+ +F+ + + P L+ + N RL L A + GLN++G+ + M Sbjct: 552 LSQLFNRFYD---QVPVLKAKEPN----LSSRLILCQLTADTLKMGLNLLGIPTLERM 602 >gi|295687776|ref|YP_003591469.1| arginyl-tRNA synthetase [Caulobacter segnis ATCC 21756] gi|295429679|gb|ADG08851.1| arginyl-tRNA synthetase [Caulobacter segnis ATCC 21756] Length = 600 Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 135/608 (22%), Positives = 229/608 (37%), Gaps = 119/608 (19%) Query: 48 NAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVV 107 N A+ ++ +P IA +V +K DP + SV IAG GFINL +S L + + + Sbjct: 42 NGALAAAKSAKRNPREIATQVVEILKADPRLSSVEIAGAGFINLRVSDEAL-SVRAREIA 100 Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167 + G ++ +V I++ N PMHVGH R +++G+++ L F G EV + + Sbjct: 101 ADARTGAQVLDAPRRVLIDYAGPNVAKPMHVGHLRASIIGESIKRLYRFRGDEVLGDAHF 160 Query: 168 NDAGAQINTLALSVFWRYQ--QALYNNDSDLPEG------------------------YY 201 D G Q+ L ++ +AL D G Y Sbjct: 161 GDWGFQMGLLISAILDEDAAIRALVEKLPDTAAGADPADEAALNAELDTRIALADLDRIY 220 Query: 202 PGVYLKH----VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257 P L+ KE A K ++EL N ++ + V+ + + AL + D Sbjct: 221 PAASLRQKEDAAFKERARKATAELQN--GRYGYRVLWSHFVKVSRVALEREFHALGVDFD 278 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 ++ E D + I ++ L +G + E D+ + R Sbjct: 279 LWKGESDVN----DLIEPMVGQLEAKGLLVE----------------DQGARIVRVARED 318 Query: 318 DDVDRP---LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-----HSGYVKRLEA 369 D D P ++ S+GS Y DLA + FD + + D H V R Sbjct: 319 DKQDVPPLLVVSSEGSAMYGTTDLATI-LDRRQSFDPHLILYCVDQRQALHFETVFRAAY 377 Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------------- 415 +A E + ++ + DG P K RAG + L +++ Sbjct: 378 LAGYADEGSLE-HIGFGTMNGT--DGKPFKT--RAGGVLKLHDLIEMAREKARERLREAG 432 Query: 416 ---------------EVGSDSVRFMML--WRKNSELLDFD-FCKVKEQSKENPVFYVQYA 457 +VG +++F L +R S + D D F + K P Y+ Y Sbjct: 433 LGAELSEEQFEDTAHKVGVAALKFADLQNFRGTSYVFDLDRFTSF--EGKTGP--YLLYQ 488 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 R +S+ R+A + VI +++E D + L L + ++ A + Sbjct: 489 SVRIKSVLRKAAEAGA-----TAGEIVIGEQAERDLAML-----LDAFEGALQEAYDKKA 538 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 P +A + Y LA F ++ + A+ L RL L + L+++ Sbjct: 539 PNFVAEHAYRLAQSFSKFYAA------CPIMSADTDALRASRLALAETTLRQLELALDLL 592 Query: 578 GVESPNEM 585 GVE+P M Sbjct: 593 GVEAPERM 600 >gi|301115894|ref|XP_002905676.1| arginyl-tRNA synthetase, putative [Phytophthora infestans T30-4] gi|262110465|gb|EEY68517.1| arginyl-tRNA synthetase, putative [Phytophthora infestans T30-4] Length = 480 Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 127/516 (24%), Positives = 212/516 (41%), Gaps = 106/516 (20%) Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195 +HVGH R +V+GDT+ +L+ F G+ V+R + D G+ + TL + + + D+ Sbjct: 5 LHVGHLRSSVLGDTICNLLEFRGHRVSRISHTGDVGSALATLIVELLEQNVALETLTDAQ 64 Query: 196 LPEGYYPG---VYLKHVGKELADKYSSELLNFPEEKWL-PIVKDYSVQAMMKIIRDDLKA 251 L + Y G + + V K D +L + P V+D +A Sbjct: 65 LGKYYESGKRRLEMDTVFKHKVDDVVLQLQRLGTNGEVDPKVRDAWTRACQ--------- 115 Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310 +S + + R I D + N+ +G E P S QK D Q + Sbjct: 116 --------VSREAYQR-----IFDRLGVNVIERG---ESTYMPLVSPVVQKM-QDSGQAV 158 Query: 311 FRSTMVG---DDVDRP---LLKSDGSYTYFAADLAYFKCKYER--GF--------DNMIY 354 +G D D+P + KSDG + Y DLA C + R GF D ++Y Sbjct: 159 ESRGALGVFLDGPDKPPMLIRKSDGGFLYATVDLA---CLHSRIHGFPGVDSTQYDEIVY 215 Query: 355 VMGSDHSGYVKRLEAVA--AAVSEKKAQINVLLCEL---VRLYRDGMPIKMSKRAGDFIT 409 V + K L A A A ++++ + +V L + L DG K+S R G F Sbjct: 216 VTDQSQQLHFKHLFAAAQQAGWTQRQNKEDVKLTHAPFGLVLGHDG--TKLSSRNGAFDY 273 Query: 410 LRHVVDEVGSDSVRFMML----------WRKNSELLD-------------FDFCKVKEQS 446 L ++D ++ R + + E +D F+ + +E++ Sbjct: 274 LEDLLDGAAAECSRQALASATTGVVASELKLTQEQVDAQNRVVGDAAVRYFELAQQRERN 333 Query: 447 -----------KENPVFYVQYAYARCRSIFRQAK----DIFPDLDFD-LFPRNVIPQES- 489 K N Y+ YA AR + I R+A D F L D L ++V+ S Sbjct: 334 YKFIMSNVLNLKGNTGVYLMYASARLQGILRKAGGSSWDAFLGLSSDSLAAQDVLAHASI 393 Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549 ++ SE L + L+++ + P+ L YL+ +A FHG + EN R+ +Q Sbjct: 394 DWHPSERALALLLSQFDDEVAATLAHLYPHYLCDYLFRVAGHFHGFY----ENCRV--LQ 447 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ RL L A +++ GL ++GVE+ + M Sbjct: 448 DPHQD---SRLLLCAATDAVLRRGLQLVGVEAVDRM 480 >gi|302755802|ref|XP_002961325.1| hypothetical protein SELMODRAFT_140217 [Selaginella moellendorffii] gi|300172264|gb|EFJ38864.1| hypothetical protein SELMODRAFT_140217 [Selaginella moellendorffii] Length = 595 Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 126/565 (22%), Positives = 221/565 (39%), Gaps = 95/565 (16%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P IA+ I V++ +AG GFIN+ LS Y+ K L+ +++ GI+ ++ Sbjct: 75 NPREIAQSITRNFPQTGFVETTSVAGPGFINVKLSSVYIAKRLNELLLHGIDTWAPVLPV 134 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 + ++F S N MHVGH R ++GD LA+++ + EV R ++ D G Q L Sbjct: 135 KRAI-VDFSSPNIAKEMHVGHLRSTIIGDCLANMIEYCKVEVLRRNHVGDWGTQFGMLIE 193 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK----D 235 +F + + + D G Y + + AD+ F + +VK D Sbjct: 194 YLFEMFPN--WEDIGDQAIGDLQAFYKESKVRFDADE------EFKAKAQQAVVKLQSGD 245 Query: 236 YSVQAMMKII----RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291 +A KI+ R++ + + + + + E +P I D I L +G + E Sbjct: 246 AKYRAAWKILCNISRNEFQQVYDRLKVSLEEKGESFYNPY-IPDAIQILRDKGILEES-- 302 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA--YFKCKYERGF 349 D ++F + G + +K DG + Y + DLA +++ E+ Sbjct: 303 -------------DGATVIF---VDGHKIPLIAIKRDGGFNYASTDLAALWYRLNVEK-V 345 Query: 350 DNMIYVMG-SDHSGY------VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402 + +IYV H + KR E + + + L L DG + + Sbjct: 346 EWIIYVTDVGQHQHFDMLFKAAKRAEWLPKEGYPRTQHVGFGLV----LGADGKRFRTRQ 401 Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL--DFD------------FCKVKEQSKE 448 G + L ++DE S S ++ ++ E D D + +K + Sbjct: 402 GTG-LVRLVDLLDEAKSRSKTALIERGRDDEWSPEDLDAAAESVGYGAVKYADLKNNRET 460 Query: 449 NPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494 N F Y+ YAYAR RSI R++ +L + P E Sbjct: 461 NYTFSFEQMLDVRGNTAVYLLYAYARIRSIIRKSGKSIDELKENGAIVLTHPDER----- 515 Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554 L + L ++ V+E+A P L YLY+L+ F ++ + N Sbjct: 516 --ALGLFLIQFSEVVEDAVTRLLPNTLCEYLYNLSENFTRFYTS---------CKVNGSP 564 Query: 555 LTMMRLQLVHAVASIINSGLNIIGV 579 RL L A A ++ ++G+ Sbjct: 565 EETSRLLLCEATAIVMKQCFKLLGI 589 >gi|302763517|ref|XP_002965180.1| hypothetical protein SELMODRAFT_83543 [Selaginella moellendorffii] gi|300167413|gb|EFJ34018.1| hypothetical protein SELMODRAFT_83543 [Selaginella moellendorffii] Length = 578 Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 128/579 (22%), Positives = 232/579 (40%), Gaps = 101/579 (17%) Query: 48 NAAMILSRPLGL-----DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 NA I SR G+ +P+++A+ ++ I ++ +AG G+IN+ LS ++ + L Sbjct: 48 NAMGIWSRIKGMQSTYGNPVSVAQDVLRNIPRTSMLEKTSVAGAGYINVTLSARFIAEKL 107 Query: 103 SSIVVSGIE-YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161 ++++ G++ L K V+ F S N +HVGH R V+GD++A ++ F V Sbjct: 108 TTVLHQGVDALAPELPVKHALVD--FSSPNIAKELHVGHLRSTVIGDSVAKMLEFCNVSV 165 Query: 162 TREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL 221 R ++ D W Q + L + G ++ +G +L Y Sbjct: 166 MRRNHVGD-------------WGTQFGML-----LEHIFETGAEVEAIG-DLQKMYVEAS 206 Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG--DPSPIRDIIDN 279 F ++ K + Q ++K+ R + + H + S D R + + R + Sbjct: 207 ERFKSDEQF---KAKAQQGVVKLQRSEAE----YHAKWKSLCDVSRRAYERTYGRLNVSL 259 Query: 280 LARQGYVYEGILPPPKSKTTQKC---DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336 + Y +P +K + D +++F + G D+ + K+DG+YTY + Sbjct: 260 EEKAESFYHPYIPYAIKSLEEKGLLQESDGARVIF---LKGYDIPLIVTKTDGAYTYAST 316 Query: 337 DLA--YFKCKYERGFDNMIYVM---------------------------GSDHSGYVKRL 367 DLA +++ E+ + +IYV + H G+ L Sbjct: 317 DLAALWYRVHVEKA-EWIIYVTDVGQKQHFDMFFQAAKLAGWLPEHGFPKAQHIGFGMVL 375 Query: 368 EAVAAAVSEKKAQINVLLCELV--RLYRDGMPIKMSKRAGDFIT--LRHVVDEVGSDSVR 423 + +K VLL L+ R + R G++ L + +G +V+ Sbjct: 376 GEDGKRIRGRKG--GVLLANLLDDAKSRSHKELIERGRKGEWSGEDLEAAAEALGYGAVK 433 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + L FDF ++ + K N Y+ YAYAR SI R++ + Sbjct: 434 YADLKNNRETTYRFDFEQMLD-IKGNTAVYLFYAYARVCSIIRKSGRSIDE--------- 483 Query: 484 VIPQESEF---DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 I Q E E L +HL ++ +E++ P L YLY L+ +F ++ + Sbjct: 484 -IKQTCELVVEHPHERSLGLHLVQFTETVEDSISRLLPSTLCDYLYTLSELFTQFYTSCK 542 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 N L+ RL L A I+ GL ++G+ Sbjct: 543 VNGSLQ---------EASRLLLCEATRLIMKQGLELLGL 572 >gi|313677327|ref|YP_004055323.1| arginyl-tRNA synthetase [Marivirga tractuosa DSM 4126] gi|312944025|gb|ADR23215.1| arginyl-tRNA synthetase [Marivirga tractuosa DSM 4126] Length = 596 Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 129/602 (21%), Positives = 235/602 (39%), Gaps = 125/602 (20%) Query: 56 PLG----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE 111 PLG L P A+ I ++ + ++ S F KGF+N+ + +I S I+ + Sbjct: 48 PLGRFSKLSPEQTAKAIGEFMQENSELVSGFNVVKGFLNIVFADKVWLQIASDILNTP-N 106 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 +G G +V +E+ S N P+H+GH R +G ++A ++ +G +V + IND G Sbjct: 107 FGFK-AETGREVMVEYSSPNTNKPLHLGHLRNNFLGYSVAQILKANGNKVHKVQIINDRG 165 Query: 172 AQINTLALSVFWRYQQALYNNDSDLPE----GYYPGVYLKHVGKELADKYSSELLNFPEE 227 I ++ + ++ + S + G Y ++ + ++A+ + E Sbjct: 166 IHI-CKSMVAWQKFGEGETPESSGMKGDKLVGKYYVIFDQKYKAQIAELVEAGKTKEEAE 224 Query: 228 KWLPIVKD---------------YSVQAMM-----KIIRDDLKALNIQHD-IFISEDDFH 266 K PI+K+ Y++ M K + K + + D ++ F Sbjct: 225 KEAPIMKEAQEMLLKWEQKEPETYALWEKMNGWVYKGFENTYKTMGVDFDKLYYESQTFS 284 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 G +R + + LA + K + D+ T G D ++ LL+ Sbjct: 285 LGKEEVLRAVEEGLAYK-----------KEDGSVWIDL---------TEDGLD-EKLLLR 323 Query: 327 SDGSYTYFAADLAYFKCKYERGF---DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383 DG+ Y D+ +Y R F + IY +G++ + K L + A + K A+ Sbjct: 324 KDGTSVYMTQDIGTAILRY-RDFPKIEQQIYTVGNEQEYHFKVLFIILAKLGYKWAEN-- 380 Query: 384 LLCELVRLYRDGMPI-KMSKRAGD-----------FITLRHVVDEVGS------------ 419 C + +P KM R G F T + DE+G Sbjct: 381 --CYHLSYGMVDLPTGKMKSREGTVVDADDLMEDMFATAKSRTDELGKIDGFNEAEAQEL 438 Query: 420 ----------------DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463 D V+ MM E +DF Q P ++QY +AR + Sbjct: 439 YRQLGLGALKYYLLKVDPVKRMMF--NPEESIDF-------QGNTGP--FIQYVHARICA 487 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+A+ + + ++ P E+ LQLI+ ++P IE A P +A Sbjct: 488 ILRKAEQLGIEPQVSESLSSLEPTENNV----LQLII---DFPNKIEEAANGYAPSIIAN 540 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+Y++A ++ +S + +++ R+ VA I +N++G E+P Sbjct: 541 YVYEVAKAYNKFYSE------VSIFNESDKDALAFRIGFSRIVAETIEKSMNLLGAEAPT 594 Query: 584 EM 585 +M Sbjct: 595 KM 596 >gi|298710528|emb|CBJ25592.1| Arginyl-tRNA Synthetase [Ectocarpus siliculosus] Length = 906 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 12/149 (8%) Query: 38 RDCA---HGHLSTNAAMILSRPL-GLD-----PLTIAELIVARIKIDPDVDSVFIAGKGF 88 R CA +G NAAM L + L G D P A IVA + ++P VD+ ++ +G+ Sbjct: 354 RKCADYKNGDFQCNAAMALFKALKGGDGAPSSPQAAASAIVASLPVNPLVDTTSVSPQGY 413 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 IN+ L P+++ + ++ ++ +G K +V ++F S N MHVGH R ++G+ Sbjct: 414 INIRLRPAFINQSIAKVIKNGPAPPEV---KKMRVVVDFSSPNIAKEMHVGHLRSTIIGE 470 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTL 177 + ++ F G+ V R ++ D G Q L Sbjct: 471 AICRVLEFCGHTVFRHNHVGDWGTQFGML 499 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 5/118 (4%) Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 E+G +V++ L + S F + ++ + ++ N Y+Q+A+AR SI +A+D +L Sbjct: 749 EIGYGAVKYYDLRQHPSTSYVFSYDRMLD-TRGNTAVYLQFAHARLASILLKAQD---EL 804 Query: 476 DFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 D+ P++ + SE L L + VIE P +L YLY LA+ F Sbjct: 805 HVDVTALKASPEKVSVEHESERALAFELLMFSDVIEACLADLGPNRLCEYLYTLATKF 862 >gi|218678095|ref|ZP_03525992.1| arginyl-tRNA synthetase [Rhizobium etli CIAT 894] Length = 81 Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats. Identities = 36/80 (45%), Positives = 59/80 (73%), Gaps = 3/80 (3%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLG 58 M LF DF +R+K L++ID ++ ++ LD RI +E PRD +HG ++TNAAM+L++PLG Sbjct: 1 MNLFTDFEARIKTALEQIDL-VREKRSELDFGRIAVEPPRDASHGDVATNAAMVLAKPLG 59 Query: 59 LDPLTIAELIVARIKIDPDV 78 +P +A++I+A+++ D DV Sbjct: 60 TNPRALADIIIAKLREDADV 79 >gi|301780288|ref|XP_002925560.1| PREDICTED: probable arginyl-tRNA synthetase, mitochondrial-like [Ailuropoda melanoleuca] Length = 644 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 135/605 (22%), Positives = 251/605 (41%), Gaps = 110/605 (18%) Query: 27 KILDRIVIERPRDCAHGHLSTNAAMI----LSRPLGLDPLTIAELIVARIKIDPDVDSVF 82 K + + I R + A LS ++ + SRP D A + ++K D V + Sbjct: 92 KSISAVPISRKEEVADFQLSVDSVLENNNDHSRP---DIQVQAMRLAEKLKCDTVVSEI- 147 Query: 83 IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYG-RNLIGKG---TKVNIEFVSANPTGPMH 137 G+G +N ++ L K +L ++ G +YG ++ + G K+ +EF S N H Sbjct: 148 STGQGTVNFKINRELLTKTVLQQVINDGSKYGLKSELFSGLPQKKIVVEFSSPNVAKKFH 207 Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDL 196 VGH R ++G+ +A+L G++VTR Y+ D G Q L + Y++ L +N Sbjct: 208 VGHLRSTIIGNFIANLKEALGHQVTRINYLGDWGMQFGLLGTGFQLFGYEEKLQSN---- 263 Query: 197 PEGYYPGVYLKHVGKELAD-----KYSSEL---LNFPEEKWLPI---VKDYSVQAMMKII 245 P + VY++ V KE D K + E L + + L + +D S++ ++I Sbjct: 264 PLQHLFEVYVQ-VNKEATDDKNIAKSAHEFFQRLELGDTQALALWQKFRDLSIEEYVRI- 321 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 K L + + + S + F+R + ++D+ +G+L K T D+ Sbjct: 322 ---YKRLGVHFNEY-SGESFYREKSQEVLKLLDS--------KGLLQKT-VKGTAVVDLS 368 Query: 306 RKQLLFRSTMVGDDVDR-PLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY 363 GD +++SDG+ Y DLA + ++ FD MIYV + Sbjct: 369 GN---------GDPSSICTVMRSDGTSLYATRDLAAAIDRMDKYNFDTMIYVTDKGQKKH 419 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 +++ + + A E R G+ M R G+ L V++E+ S ++ Sbjct: 420 FQQVFQMLQIMGYDWA-------ERCRHVPFGVVQGMKTRRGNVTFLEDVLNEIRSRMLQ 472 Query: 424 FMMLWRKNSE-------------------------LLDFDFCKVKE-QSKENPVFYVQYA 457 M + E L D+ F + QS+ + ++QY Sbjct: 473 NMASIKTTRELENPQETAERVGLAALIIQDFKGLLLSDYQFSWDRVFQSRGDTGVFLQYT 532 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 +AR S+ ++ F + F + QE + + ++ HL + V+ ++ + Sbjct: 533 HARLHSL----EETFGCGYLNDFNTGCL-QEPQ----SVSILQHLLRFDEVLYRSSQDLQ 583 Query: 518 PYKLAFYLYD---LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 P + YL LA+V H + F++ + ++ RL L AV S++ +G+ Sbjct: 584 PRHIVSYLLTLSHLAAVAH----------KTLFIKDSPPEVAGARLHLFRAVRSVLANGM 633 Query: 575 NIIGV 579 ++G+ Sbjct: 634 KLLGI 638 >gi|325287081|ref|YP_004262871.1| Arginyl-tRNA synthetase [Cellulophaga lytica DSM 7489] gi|324322535|gb|ADY30000.1| Arginyl-tRNA synthetase [Cellulophaga lytica DSM 7489] Length = 590 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 129/588 (21%), Positives = 226/588 (38%), Gaps = 112/588 (19%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P I E I +K + F KGF+N+ +S ++ + I E + Sbjct: 53 NPAQIGEQIGVYLKDNVAEVENFNVVKGFLNIVISDAFYVNFFNGI--KNTENYGFVTES 110 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 V +E+ S N P+H+GH R ++G ++A ++ SG +V + IND G I L Sbjct: 111 EDAVMVEYSSPNTNKPLHLGHIRNNLLGYSVAEILKASGKKVYKTQIINDRGIHICKSML 170 Query: 180 SVFWRYQQALYNNDSDLPE----------GYYPGVYLKHVGKELADKYSSELLNFPEEKW 229 + W+ L+ N + PE G Y + K ++A+ + EK Sbjct: 171 A--WK----LFGN-GETPESTGIKGDKLVGNYYVRFDKEYKAQIAELVAKGTDAKEAEKQ 223 Query: 230 LPIV------------KDYSVQAMMKIIRD--------DLKALNIQHDIFISEDDFHRGD 269 PI+ D V A+ K + K L + D + E D + Sbjct: 224 APILLEAQEMLRKWEAGDKEVVALWKTMNQWVYNGFEVTYKNLGVDFDTYYYESDTYLLG 283 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 +DI+D +G Y K + D+ + L ++ +L++DG Sbjct: 284 ----KDIVDEGLEKGVFYR------KEDGSVWIDLSDEGL----------DEKIVLRADG 323 Query: 330 SYTYFAADL--AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387 + Y D+ A + K + M+Y +G++ + L + + A+ L Sbjct: 324 TAVYMTQDIGTAIQRTKDYPDVNGMVYTVGNEQDYHFNVLFLILKKLGFSWAE---QLYH 380 Query: 388 LVRLYRDGMPIKMSKRAGDFI-----------TLRHVVDEVG----------SDSVRFMM 426 L D KM R G + T + +E+G + R + Sbjct: 381 LSYGMVDLPSGKMKSREGTVVDADDLMKDMTATAASISEELGKLDGYTDKEKEELYRIIG 440 Query: 427 LWRKNSELLDFDFCK---------VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 L +L D K V+ Q P ++QY YAR +SI R++ DF Sbjct: 441 LGALKYYILKVDPKKRILFNPEESVEFQGNTGP--FIQYTYARIQSILRKS-------DF 491 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 D + +V ++ E +L+ + +P V++NA P +A Y YDL F+ + Sbjct: 492 D-YTASVTT--NDLHEKEKELLKQIQVFPSVVQNAAQNYSPALVANYTYDLVKEFNSFYQ 548 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + + + + R+QL V +I S ++G+E PN M Sbjct: 549 N------VPILPEEDLQKKIFRVQLSKKVGEVIKSAFTLLGIEVPNRM 590 >gi|115495861|ref|NP_001069346.1| probable arginyl-tRNA synthetase, mitochondrial precursor [Bos taurus] gi|122144258|sp|Q0P5H7|SYRM_BOVIN RecName: Full=Probable arginyl-tRNA synthetase, mitochondrial; AltName: Full=Arginine--tRNA ligase; Short=ArgRS; AltName: Full=Arginyl-tRNA synthetase-like; Flags: Precursor gi|112362204|gb|AAI20021.1| Arginyl-tRNA synthetase 2, mitochondrial [Bos taurus] gi|296484057|gb|DAA26172.1| arginyl-tRNA synthetase 2, mitochondrial precursor [Bos taurus] Length = 578 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 139/612 (22%), Positives = 255/612 (41%), Gaps = 124/612 (20%) Query: 27 KILDRIVIERPRDCAHGHLSTNAAMI----LSRP-LGLDPLTIAELIVARIKIDPDVDSV 81 K + + I R + A LS ++ + SRP + + + +AE ++K D V + Sbjct: 26 KSISAVPISRKEEVADFQLSVDSLLENNNDHSRPDIQIQAMRLAE----KLKCDTVVSEI 81 Query: 82 FIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYG-RNLIGKG---TKVNIEFVSANPTGPM 136 G+G +N ++ L K +L ++ G +YG ++ + G ++ +EF S N Sbjct: 82 -STGQGTVNFKINRELLTKTVLQQVIEDGSKYGLKSELFSGLPKKRIVVEFSSPNVAKKF 140 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSD 195 HVGH R ++G+ +A+L G++VTR Y+ D G Q L + Y++ L ++ Sbjct: 141 HVGHLRSTIIGNFIANLKEALGHQVTRINYLGDWGMQFGLLGTGFQLFGYEEKLQSS--- 197 Query: 196 LPEGYYPGVYLKHVGKELAD-----KYSSEL---LNFPEEKWLPI---VKDYSVQAMMKI 244 P + VY++ V KE AD K + E L + + L + +D S+ M+I Sbjct: 198 -PLQHLFEVYVQ-VNKEAADDKNVAKSAHEFFQRLELGDMQALALWQKFRDLSIDEYMRI 255 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 + L + D + S + F+R + ++D+ +G+L K T D+ Sbjct: 256 Y----QRLGVHFDEY-SGESFYREKSQEVLKLLDS--------KGLLQKT-LKGTAVVDL 301 Query: 305 DRKQLLFRSTMVGDDVDR-PLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSG 362 GD +++SDG+ Y DLA + E+ FD MIYV Sbjct: 302 SGN---------GDPSSVCTVMRSDGTSLYATRDLAAAIDRMEKYNFDKMIYVTDKGQKK 352 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 + +++ + + A+ C+ V G+ M R GD L V++E+ + Sbjct: 353 HFQQVFQILQIMGYDWAE----RCQHVPF---GVVQGMKTRRGDVTFLEDVLNEIRLRML 405 Query: 423 RFMMLWRKNSE-------------------------LLDFDFCKVKE-QSKENPVFYVQY 456 + M + E L D+ F + QS+ + ++QY Sbjct: 406 QNMASIKTTKELENPEETAEQVGLAALIIQDFRGFLLSDYQFSWDRVFQSRGDTGVFLQY 465 Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ------LIVHLAEYPRVIE 510 +AR S+ ++ F ++F+T+ LQ ++ HL + V+ Sbjct: 466 THARLHSL----EETFG-----------CGYLNDFNTACLQEPQSVSILQHLLRFDEVLY 510 Query: 511 NATIAQEPYKLAFYLYD---LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 ++ +P + YL LA+V H H R +P ++ RL L AV Sbjct: 511 RSSQDLQPRHIVSYLLTLSHLAAVAH-RTLHVRNSP---------PEVAGARLHLFRAVR 560 Query: 568 SIINSGLNIIGV 579 S++ +G+ ++G+ Sbjct: 561 SVLANGMKLLGI 572 >gi|303243691|ref|ZP_07330032.1| Arginine--tRNA ligase [Methanothermococcus okinawensis IH1] gi|302485933|gb|EFL48856.1| Arginine--tRNA ligase [Methanothermococcus okinawensis IH1] Length = 358 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 95/407 (23%), Positives = 174/407 (42%), Gaps = 92/407 (22%) Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279 +LL EE + +Y+V + ++ LK LNI+HD F+ E + + ++++I Sbjct: 3 KLLKKNEENEITKKFEYAVNYALSGFKETLKNLNIKHDKFVWESSYVKN--GMVKEVIKR 60 Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAAD 337 L G V K ++R + +++ L+ + +G+ Y D Sbjct: 61 LMETGKV-------------------EKDEVYRLNLSDFGIEKKLVLARLNGTSLYSTRD 101 Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397 +AY K + D I ++G+DH + + A + +I + E + L M Sbjct: 102 IAYHIDKM-KNCDIGINILGADHKLTAEMVNASLKLLGYNTPEI--VFYEFISLPEGSM- 157 Query: 398 IKMSKRAGDFITL--------RHVVDEV-------------------GSDSVRFM----- 425 S R G FI++ R +DEV + +VR+ Sbjct: 158 ---STRRGRFISIDELFEEAKRRAIDEVKKRGVATDKDEINEIAHKIATGAVRYNIVRIS 214 Query: 426 ----MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD--LDF-D 478 M++R + E LDF+ PV +QYA+ARC I ++ + + ++F + Sbjct: 215 PEKPMVFRWD-EALDFEKVGC-------PV--IQYAHARCCRILENKENNYNEKNINFNE 264 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 LF +I E LI L ++P ++E + A++P +A Y+ D+A F+ + + Sbjct: 265 LFNYELIDNEK-------ILIKTLLKFPNIVEKSANARKPQIVAIYMLDVAQAFNRFYGN 317 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ N+ + RL+LV +I +GLNI+G+E P +M Sbjct: 318 ------CPILKEENQNIVYSRLKLVECTKIVIENGLNILGIECPGKM 358 >gi|197294584|ref|YP_001799125.1| Arginyl-tRNA synthetase [Candidatus Phytoplasma australiense] gi|171853911|emb|CAM11874.1| Arginyl-tRNA synthetase [Candidatus Phytoplasma australiense] Length = 557 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 128/598 (21%), Positives = 244/598 (40%), Gaps = 88/598 (14%) Query: 19 DCKIKVEK---KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID 75 + KIK+EK K+L+ V + + + + ++ L+P I + I + Sbjct: 5 NIKIKIEKTLKKLLNEDVFLQEQVNNYDFDFSLPLFAYAKKQKLNPALIFKNIEKELIKT 64 Query: 76 PDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG 134 +++ + GF+N+ L + K IL I YG + K V I++ S N Sbjct: 65 EEIEEIMFLN-GFLNIKLKRKLVAKNILLEINRLQSNYG-DQPNKNKTVVIDYSSPNIAK 122 Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL--ALSVFWRYQQALYNN 192 VGH R V+G+ L ++ G++V ++ D G Q + A + + ++ L + Sbjct: 123 NFSVGHLRSTVLGNALKNIYQKLGFKVIGINHLGDWGTQFGKMIVAYQKWGQKEKILKDP 182 Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE------EKWLPIVKDYSVQAMMKIIR 246 ++L + Y + L D+ + L + E W +D S+ KI Sbjct: 183 INELQKLYLLFHQKAEENQTLNDEANEAFLQLEKKNKEYLELW-KYFRDVSLNEFCKI-- 239 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 K L + D F+ E ++ I+++++ L ++ + + + Sbjct: 240 --YKILGVSFDYFLGESFYN----DQIKELLEELHQKKLLKQ----------------EE 277 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVK 365 K LL + + + K++GS Y DLA K +Y+ ++YV+G++ Y K Sbjct: 278 KMLLIELDQLPPGL---IQKTNGSTLYLTRDLATLKYRYKTYNCQTILYVVGNEQKLYFK 334 Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425 +L+ + + I + LV + DG K+S R F TL V+++ + + + + Sbjct: 335 QLDQIIKKMGYHDVTIENINFGLVLM--DGK--KISTRHHKFTTLMDVINQATNLAEKII 390 Query: 426 MLWR-----------------------KNSELLDFDF-CKVKEQSKENPVFYVQYAYARC 461 KN LD DF + Q K Y+QY AR Sbjct: 391 QEKNPSLTNIKETAQKIAVGAIIFNDLKNDRHLDIDFNLENILQFKGQTAPYLQYTAARL 450 Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 S+ ++ K +DF L N+ Q F LI L+++P ++E + + P L Sbjct: 451 NSLLKKEK-----IDFQLIDENIYQQNHYF-----ALIKLLSQFPWILEKSQKEKMPSIL 500 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 + +L + +G ++ R + ++++ + L L+ AV +I L I+G+ Sbjct: 501 SRHLIKITQNVNGLYAQER-------ILSHDKIIKNTNLLLIKAVLIVIKESLRILGI 551 >gi|302348141|ref|YP_003815779.1| Arginyl-tRNA synthetase [Acidilobus saccharovorans 345-15] gi|302328553|gb|ADL18748.1| Arginyl-tRNA synthetase [Acidilobus saccharovorans 345-15] Length = 633 Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 1/123 (0%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAG-KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 DP +A+++ +R+ D ++ V + KGF NL L K + +G E Sbjct: 48 DPDEVAKILASRLASDYNIHYVDVKNLKGFTNLTFRCGDLVKAVVEWAKNGEELEVPKTS 107 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 + K+ +E SANP P+H+GH R A +GD+LA L+ G+ V +YI+D G Q++ A Sbjct: 108 RPLKIVVEHTSANPIHPLHIGHTRNACIGDSLARLLKSRGHSVVTRFYIDDVGRQVSIAA 167 Query: 179 LSV 181 L V Sbjct: 168 LGV 170 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 65/292 (22%), Positives = 121/292 (41%), Gaps = 51/292 (17%) Query: 324 LLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 LL+SDG+ Y DLAY K+ + D +I V+G+D +L + ++ +N Sbjct: 363 LLRSDGTTLYTTRDLAYSILKFSQANADKVINVIGADQRLPQLQLRVALYGLGHRREALN 422 Query: 383 VLL--CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS--------------------- 419 ++ E+VRL M R G+++TL ++ E+ + Sbjct: 423 LIHYDYEIVRLTTGS----MHGRRGEYVTLDSLLTELSTRALKEVTERNPSMSKEEAMVI 478 Query: 420 ------DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 ++R+ M+ S+ L F K +E+ Y+QY Y R +I + + Sbjct: 479 ARSISVGAIRYFMVHMSASKPLTFSVDKAMNL-RESSGPYLQYTYVRAVNILEKHGKV-- 535 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 DL+ +V P + +L+V + P VI A P L +L DLA F+ Sbjct: 536 DLN------SVDPDKCT--EPRRRLLVKALKTPLVIAKAADDLAPEDLVSHLADLADSFN 587 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++ +R ++L + + +V I G++++G+ + M Sbjct: 588 TWY---EQDSVIREPDVGAKELKALIVDIVRQSLGI---GMSVLGIPTLRRM 633 >gi|330796163|ref|XP_003286138.1| hypothetical protein DICPUDRAFT_150090 [Dictyostelium purpureum] gi|325083883|gb|EGC37324.1| hypothetical protein DICPUDRAFT_150090 [Dictyostelium purpureum] Length = 716 Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 125/596 (20%), Positives = 245/596 (41%), Gaps = 117/596 (19%) Query: 78 VDSVFIAGKGFINLYLSPSYLRKILSSIV--------------VSGIEYGRN-------- 115 ++ + I KG++NL +S YL IL+ + + + Y N Sbjct: 150 IEKIEIGSKGYLNLRVSEEYLLDILNLWIKGHEGKGAEADKFKIKNLIYNENNKTDDNNK 209 Query: 116 -LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 L + KV ++F S N + +HVGH R +G+++ ++ + G++V R + D G + Sbjct: 210 MLPLRSKKVLVDFASPNMSKELHVGHLRSIALGESVCRILEYMGHDVERISHAGDFGTPM 269 Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234 + Q L + + + Y G + KEL+D YS K P Sbjct: 270 GIVIAHSLETKQPFLRH----IWDKEYKGEIIIPTPKELSDIYSESK---ARTKTDPEFN 322 Query: 235 DYSVQAMMKIIR-----DDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQG-YVY 287 ++ + ++ + D + ++ +I+ D R + + D+++ N+ +G Y Sbjct: 323 KRTLASAAELQKGPPTPDGGGSDPDIYNAWIALCDASRIGFNQVFDMMNINVNERGESFY 382 Query: 288 EGILPPPKSKTTQKCDM---DRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFK 342 +LP + T+K + + ++ +F + G+D P++ KSDG+Y Y DLA K Sbjct: 383 REMLPKVIDELTEKGFVKLSEGRKCIF---LFGED-KTPVIVQKSDGAYLYATTDLAAIK 438 Query: 343 CKYERGFDNMIYVMG---SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR-------LY 392 + E ++Y+ SDH + ++ A + +K +++ L +VR Sbjct: 439 HRVENDKQWIVYITDDSQSDHFEQIFKIAENAKWLDLEKTRVDHLSFGVVRGSNGSKLSS 498 Query: 393 RDGMPIKM-----------------------------SKRAGDFITLRHV-----VDEVG 418 RDG P+ + + A D R++ +D+V Sbjct: 499 RDGSPVALIDLLHESIERAKQATSISKSFTRAEKIDSDQNARDITVPRYLDSDETLDDVT 558 Query: 419 SDSVR---------FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 D + F + R NS + +D K N Y+ Y Y R ++F++A Sbjct: 559 DDHFQKIGLGALKYFDLTHRNNSYIFSYDNML---SFKGNTSIYILYCYTRISTLFKRA- 614 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 + + D N I + E LI + + V+++ P + YL+++A Sbjct: 615 ----NFNIDQINLNEI-DFTNLTEKERNLIFLFSRFSDVLKSTEQNLRPGLICDYLWEIA 669 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + FH + E+ + + N+KL + +A I+++GLN++GVE+ ++ Sbjct: 670 NSFHQLY----ESEKFIGSERQNQKLL-----ICYATQRILSTGLNLLGVETVEKL 716 >gi|329888286|ref|ZP_08266884.1| arginyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568] gi|328846842|gb|EGF96404.1| arginyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568] Length = 599 Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 137/586 (23%), Positives = 230/586 (39%), Gaps = 100/586 (17%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A + R+ DP + SV +AG GFIN+ LS + L + + + G + + + Sbjct: 54 NPRELAAKVAERLAADPRLSSVEVAGPGFINMKLSNAALAQRAAEVAADKELAGASRV-E 112 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 KV I++ N PMHVGH R A++G++L L G +VT + + D G Q+ L Sbjct: 113 PRKVVIDYGGPNVAKPMHVGHLRSAIIGESLKRLFRLRGDDVTGDAHFGDWGFQMGLLIT 172 Query: 180 SVFWRYQQALYNNDSDLPEGYY---PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236 + D L + + G + LAD L + K P +D Sbjct: 173 AC----------GDEGLADAFMVEGDGPFPAETPVTLADLDRLYPLAAGKAKEDPAFRDR 222 Query: 237 SVQAMMKI--------------IRDDLKALNIQHDIFISEDDFHRG--DPSPIRD-IIDN 279 + +A ++ + +AL ++D + D G D P+ D +I + Sbjct: 223 ARKATAELQGGRPGYRALWSHFVAVSREALKREYDDLSVDFDLWNGESDADPLMDEMIAD 282 Query: 280 LARQGYVYEG----ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTY 333 L +G + E ++ + T RK+ L +++ PLL S+GS Y Sbjct: 283 LKAKGLLVEDDGAQVIHVARDGET------RKKKLADGSVIEAPSPPPLLVISSEGSAMY 336 Query: 334 FAADLAY-FKCKYERGFDNMIYVMG---SDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 DLA K G D ++YV+ ++H V R +A EK + L Sbjct: 337 GTTDLATILDRKKSIGPDLILYVVDERQAEHFEQVFRAAYLAGYAPEKSLE---HLGFGT 393 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDE-------------VGSD---------------- 420 DG P K RAG + LR ++D+ +G D Sbjct: 394 MNGADGKPFKT--RAGGVLKLRDLIDQATEKARERLHEAKLGDDLPAEEFEDIAHKVAVA 451 Query: 421 SVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 +++F L + FD + + K P Y+ Y R +S+ R+A + L Sbjct: 452 ALKFSDLSNNRTTSYVFDLDRFMSFEGKTGP--YLLYQAVRVKSLLRKAA----EQGVAL 505 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 P VI + +E D L + L + +A + P +A + Y LA F ++ Sbjct: 506 AP-IVIEEAAERD-----LALTLDAFDAATADAYDKRSPNLIAEHAYRLAQSFSKFYAA- 558 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A + RL L A + + L ++G+E+P M Sbjct: 559 -----CPILVAPDEATKGSRLALAAATLHQLETALRLLGIETPERM 599 >gi|332886430|gb|EGK06674.1| arginyl-tRNA synthetase [Dysgonomonas mossii DSM 22836] Length = 598 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 129/598 (21%), Positives = 231/598 (38%), Gaps = 128/598 (21%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS---GIEYGRNLI 117 P A+ I +K + S F KGF+NL ++ + +L+ + + GI N Sbjct: 56 PEQTAQEIGEWLKANASEVSSFNVIKGFLNLTIATTCWIDVLNEVYAAESYGITKADN-- 113 Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 V +E+ S N P+H+GH R ++G L+ ++ +G V + +ND G I Sbjct: 114 -NSPLVMVEYSSPNTNKPLHLGHIRNNLLGFALSEVLKANGNRVVKTNIVNDRGIHICKS 172 Query: 178 ALSVFWRYQQALYNNDSDLPE----------GYYPGVYLKHVGKELADKYSSELLNFPEE 227 L+ W+ + + PE G Y ++ KH ELA+ S L E Sbjct: 173 MLA--WQKW-----GNGETPESTGKKGDHLVGDYYVMFDKHYKAELAELQSKGLSKEEAE 225 Query: 228 KWLPIVK------------DYSVQAMMKIIR--------DDLKALNIQHD-IFISEDDFH 266 ++ D ++ K + + K L + D I+ + + Sbjct: 226 AQSTLMAEARNMLRLWEGGDVETVSLWKKMNSWVYAGFDETYKRLGVDFDEIYYESETYL 285 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 G +D + N + G +Y QK D + T G D + LL+ Sbjct: 286 DG-----KDTVLNGLKNGVLY------------QKED---GSIWIDLTAEGLD-HKLLLR 324 Query: 327 SDGSYTYFAADL--AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 SDG+ Y D+ A + K + + MIYV+G++ + + + L V + + + V Sbjct: 325 SDGTSVYMTQDIGTAQQRFKAHKDLNKMIYVVGNEQNYHFQVLSIVLDKLGFEFGKGLVH 384 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------- 416 + +G KM R G + +VDE Sbjct: 385 FSYGMVELPEG---KMKSREGTVVDADDLVDEMVATAKETSQELGKLEGVSEQEANNIAR 441 Query: 417 -VGSDSVRFMMLW---RKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467 VG ++++ +L +KN E +DF+ N ++QY +AR +SI R+ Sbjct: 442 MVGMGALKYFILKVDPKKNMTFNPKESIDFN---------GNTGPFIQYTHARIQSILRK 492 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 A + + + + E L+ +AEY +++ A P +A Y+YD Sbjct: 493 AAEQGISIP------TTLSADISLSVKEEGLVQQVAEYASIVKQAGDEYNPALIANYIYD 546 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L ++ + ++ N L RL L V ++ SG++++G+E P+ M Sbjct: 547 LVKEYNQFYHD------YTILKEENADLKNFRLILSDNVGRVVKSGMSLLGIEVPDRM 598 >gi|91079400|ref|XP_966449.1| PREDICTED: similar to arginyl-tRNA synthetase [Tribolium castaneum] gi|270004375|gb|EFA00823.1| hypothetical protein TcasGA2_TC003711 [Tribolium castaneum] Length = 554 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 108/494 (21%), Positives = 198/494 (40%), Gaps = 80/494 (16%) Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV--F 182 +EF S N P H+GH R ++G+ + +L +F +VT+ Y+ D G Q + + V Sbjct: 108 VEFSSPNIAKPFHMGHLRSTIIGNFIGNLNSFLNNKVTKLNYLGDWGTQFGFIKVGVDEL 167 Query: 183 WRYQQALYNNDSDLP-EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 Q+A+ NN L E Y L +AD+ E EK P +Y + Sbjct: 168 QHTQEAIKNNPLKLLYESYVHANKLAEKDPTVADRARQEFNKL--EKGAPEGLEY-WKEY 224 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRG-DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 M+ +++L+A + + E +F I+++ID L+ + V + + Sbjct: 225 MQYSQNELEATYKRLGVVFDEYNFESNYSAKDIQNVIDILSSKHIVQK------EGDGKL 278 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359 D++++++ ++KSDGS Y D+A +Y R FD M+Y++ + Sbjct: 279 SVDVNKRKV-------------SIMKSDGSTLYLTRDIAAAIDRYNRYSFDKMLYIVDNS 325 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--- 416 S + L+A+ +S A ++ + G MS R G + LR ++DE Sbjct: 326 QSDHFNNLKAILHKMSLPWAH-------KLQHVKFGRIRGMSTRKGTAVFLRDILDECRE 378 Query: 417 ------VGSDSVRFMMLWRKNSELLDFDFCKVKE-----------------QSKENPVFY 453 V S + R + S++L V + Q + + Sbjct: 379 LMIKKQVESPNTRVPIEDSAVSDILGVSCVIVNDLKQRRQKDYEFTWDSVLQVQGDTGVK 438 Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513 +QY + R S+ R + P+ VIP E + L+ +A + ++ + Sbjct: 439 LQYTHCRLYSLERNSGAT--------RPKKVIP-EVLKEPEATALVREIARFHEILNRSN 489 Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR--KLTMMRLQLVHAVASIIN 571 E L YL+ L + N L+ + N ++ RL L ++ Sbjct: 490 EQLEACILVTYLFRLCNQI---------NKALKVLPVKNTDPEIASQRLLLFITARQVLG 540 Query: 572 SGLNIIGVESPNEM 585 G++I+G+ +EM Sbjct: 541 KGMSILGLHPLDEM 554 >gi|296121593|ref|YP_003629371.1| arginyl-tRNA synthetase [Planctomyces limnophilus DSM 3776] gi|296013933|gb|ADG67172.1| arginyl-tRNA synthetase [Planctomyces limnophilus DSM 3776] Length = 660 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 1/139 (0%) Query: 39 DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98 D G N AM + + +G IAE IV +KID + +AG GFINL L S+L Sbjct: 34 DTRFGDFQANCAMPMQKSVGKPAREIAEQIVQGLKIDDICEPATVAGPGFINLKLKESWL 93 Query: 99 RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG 158 + + ++ G + ++F S N PMHVGH R V+G L ++ G Sbjct: 94 EQAATE-CAHDVQLGLEPASPSRRYIVDFSSPNVAKPMHVGHLRSTVIGHALYKVLKKLG 152 Query: 159 YEVTREYYINDAGAQINTL 177 + V + +I D G Q + Sbjct: 153 HSVQSDNHIGDWGTQFGMI 171 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 66/294 (22%), Positives = 109/294 (37%), Gaps = 50/294 (17%) Query: 326 KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 KSDG++TY DLA + + + D ++YV+ S S + L A A + ++ + Sbjct: 383 KSDGAFTYATTDLATIEYRVDSLQADAILYVVDSRQSEHFDMLFATARKLGYSNVELTHV 442 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------- 416 + L D P K R+GD + L ++DE Sbjct: 443 KFGTI-LGEDKRPFKT--RSGDTVGLESLLDEAVVRARQIVNAGDDGKPTGAELDDTTRQ 499 Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VG + + L F F K+ ++ + Y+QYAYAR IFR+ Sbjct: 500 AIAEIVGIGGIIYADLHHSRESDYTFSFEKML-ATRGDTATYMQYAYARTHGIFRKGGID 558 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 L P + E L + L + + + P L YL++ A+ Sbjct: 559 IEQLRKGKHPLRLT------QPYERMLALQLVRFGEALHDVAAEYRPNVLTQYLFETANR 612 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + E P L+ + R RL L A ++ GL ++G+ +M Sbjct: 613 FSTFFD---ECPVLKETDDSIRN---SRLLLCDWTARVMKEGLGLLGIRVAEKM 660 >gi|229828295|ref|ZP_04454364.1| hypothetical protein GCWU000342_00353 [Shuttleworthia satelles DSM 14600] gi|229792889|gb|EEP29003.1| hypothetical protein GCWU000342_00353 [Shuttleworthia satelles DSM 14600] Length = 588 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 120/609 (19%), Positives = 240/609 (39%), Gaps = 97/609 (15%) Query: 29 LDRIVIE-RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87 L R+ + RP C + N AM ++ P IA+ I + D S G Sbjct: 25 LGRVTVSNRPDLCEY---QCNGAMAGAKTYHKAPFMIADEIADCLSGDEMFASAESVKPG 81 Query: 88 FINLYLSPSYLRKILSSIVVS----GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143 F+N+ +S +L + + G+E RN + I++ N P+HVGH R Sbjct: 82 FLNIRVSGDFLADYANQMAADQERLGLEKERN----PRSIIIDYGGPNVAKPLHVGHLRS 137 Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203 A++G+ + + F+G +V + ++ D G Q+ + + R +Y D+D +G YP Sbjct: 138 AIIGEAVKRIARFAGNQVLGDIHLGDWGLQMGLIITELRERKPDLVYF-DADY-QGAYPE 195 Query: 204 -----------VYLKHVGKELADK-YSSELLNFPEE-----KWLPIVKDYSVQAMMKIIR 246 +Y GK D+ Y + + E + + ++ ++ + ++ Sbjct: 196 EAPFTISELEEIYPCASGKSKEDEGYHAAAMQATNELQQGRRGYQALLEHILRVSVSDLK 255 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 + + L++ D+++ E D P+ +++ + R G+ Y + Sbjct: 256 KNYEKLSVSFDLWMGESDAQPYIPA----MVEKMKRDGFAY----------------LSE 295 Query: 307 KQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSG 362 L+ D + P +LKSDGS Y DLA + ER D +IYV+ Sbjct: 296 GALVVDVAEGSDTKEMPPCMILKSDGSALYNTTDLATLVMREERYQPDEIIYVVDKRQEL 355 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 + + VA + ++ + RDG P K R G + L +++ +V + Sbjct: 356 HFTQCFRVARKTKIVPPETGLVFLGFGTMNGRDGKPFKT--RDGGVMRLENLLADVNAKM 413 Query: 422 VRFMMLWR--------KNSELLDFDFCK---VKEQSKENPVF--------------YVQY 456 + ++ + +E++ K + Q+ ++ VF Y+ Y Sbjct: 414 LEKILEGGHMQKEEAGRTAEIVGLAALKYGDLSNQASKDYVFDLDRFTSAEGNTGPYILY 473 Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 R +SI ++ ++ + L V+P S + +QL + R A Sbjct: 474 TIVRIKSILKRYEE-----ENSLEGLRVLPPASPSEKDLMQLAARFGDNFRT---AYEEL 525 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 P+KL Y+Y+L++ F+ + + + + + + L+ I+ +++ Sbjct: 526 APHKLCAYIYELSNAFNRFYHE------TKILSEEDEEKKASWIALLSLTKRILEKSIDL 579 Query: 577 IGVESPNEM 585 +G +P M Sbjct: 580 LGFAAPERM 588 >gi|159900648|ref|YP_001546895.1| arginyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779] gi|159893687|gb|ABX06767.1| arginyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779] Length = 591 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 4/125 (3%) Query: 54 SRPLGLDPLTIAELIVARIKIDPD--VDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGI 110 ++ G P +A+ +VA ++ PD V S I+G ++N L+P ++ + +L+ I G Sbjct: 48 AKSRGSTPAQVAQELVAALQFAPDSLVASATISGP-YVNFNLNPQTFAKAVLADIQAGGA 106 Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170 YG + G KV +E+ S N MHVGH R ++G +A+L GYEV R+ ++ D Sbjct: 107 TYGSSTKGNNRKVIVEYSSPNIAKRMHVGHIRSTIIGQAIANLYQRLGYEVIRDNHLGDY 166 Query: 171 GAQIN 175 G Q Sbjct: 167 GKQFG 171 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 66/294 (22%), Positives = 120/294 (40%), Gaps = 56/294 (19%) Query: 326 KSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383 +SDG Y D+A K + E+ + D MIY++G + ++ A++ A+ A++ + Sbjct: 320 RSDGGTLYMTRDIATIKYR-EQTYNPDAMIYIVGQPQELHFRQTFAISKALGYTDAEL-I 377 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416 + G P +S R G+ I L ++DE Sbjct: 378 HISFGTVFDAKGQP--LSTRKGNMIYLETLLDEARNRAKALIEQKMAEGKTQLTAELIDQ 435 Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDI 471 VG +V + L++ + D+ ++ + +P Y+QY +ARC SI R + Sbjct: 436 VAEQVGVGAVMYNDLYQDTKRNITVDWDRMLAFEGNSSP--YLQYMHARCCSILRDFGKL 493 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 D L ++E L+ LA P++IE A P+ +A +LY A Sbjct: 494 PASYDGSLLSH----------SAETGLLKELARLPQIIEEAAARYAPFVVADWLYATARA 543 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + ++A +L + R +V A A + +GL ++ + +P M Sbjct: 544 FSAFYDA------CSVLKAETPELRVARGHVVAATAQALRNGLALLSIAAPERM 591 >gi|73973434|ref|XP_539032.2| PREDICTED: similar to arginyl-tRNA synthetase-like isoform 1 [Canis familiaris] Length = 578 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 136/608 (22%), Positives = 255/608 (41%), Gaps = 116/608 (19%) Query: 27 KILDRIVIERPRDCAHGHLSTNAAMI----LSRPLGLDPLTIAELIVARIKIDPDVDSVF 82 K + + I R + A LS ++ + SRP D A + ++K D V + Sbjct: 26 KSISAVPISRKEEVADFQLSVDSLLENNNDHSRP---DTQVQARKLAEKLKCDSVVSEI- 81 Query: 83 IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYG-RNLIGKG---TKVNIEFVSANPTGPMH 137 G+G +N ++ L K +L ++ G +YG ++ + G K+ +EF S N H Sbjct: 82 STGQGTVNFKINRELLTKTVLQQVIKDGSKYGLKSELFSGLPQKKIVVEFSSPNIAKKFH 141 Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDL 196 VGH R ++G+ +A+L G++VTR Y+ D G Q L + Y++ L ++ Sbjct: 142 VGHLRSTIIGNFIANLKEALGHQVTRINYLGDWGMQFGLLGTGFQLFGYEEKLQSS---- 197 Query: 197 PEGYYPGVYLKHVGKELAD-----KYSSEL---LNFPEEKWLPI---VKDYSVQAMMKII 245 P + VY++ V KE AD K + E L + + L + +D S++ +++ Sbjct: 198 PLQHLFEVYVQ-VNKEAADDKNVAKSAHEFFQRLELGDTQALALWQKFRDLSIEEYVRVY 256 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 K L + D + S + F+R + ++D+ +G + + I K T D+ Sbjct: 257 ----KRLGVHFDEY-SGESFYREKSQEVLKLLDS---KGLLQKTI------KGTAIVDLS 302 Query: 306 RKQLLFRSTMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY 363 GD L++SDG+ Y DLA + ++ FD MIYV + Sbjct: 303 GN---------GDPSSICTLMRSDGTSLYATRDLAAAIDRMDKYNFDTMIYVTDKGQKKH 353 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 +++ + + A+ C+ V G+ M R GD L V++E+ ++ Sbjct: 354 FQQVFQMLQIMGYDWAE----RCQHVPF---GVVQGMKTRKGDVTFLEDVLNEIRLRMLQ 406 Query: 424 FMMLWR-------------------------KNSELLDFDFCKVKE-QSKENPVFYVQYA 457 M + K L D+ F + QS+ + ++QY Sbjct: 407 NMASLKTTKVLENPQETAERVGLAALIIQDFKGLLLSDYQFSWDRVFQSRGDTGVFLQYT 466 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ------LIVHLAEYPRVIEN 511 +AR S+ ++ F ++F+T+ LQ ++ HL + V+ Sbjct: 467 HARLHSL----EETFG-----------CGYLNDFNTACLQEPQSVSILQHLLRFDEVLYR 511 Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571 ++ +P + YL L+ + G + L +V+ + ++ RL L AV S++ Sbjct: 512 SSQDLQPRHIVSYLLTLSHL------AGMAHKTL-YVKDSPPEVAGARLHLFRAVRSVLA 564 Query: 572 SGLNIIGV 579 +G+ ++G+ Sbjct: 565 NGMKLLGI 572 >gi|195384810|ref|XP_002051105.1| GJ14045 [Drosophila virilis] gi|194147562|gb|EDW63260.1| GJ14045 [Drosophila virilis] Length = 594 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 119/605 (19%), Positives = 236/605 (39%), Gaps = 127/605 (20%) Query: 43 GHLSTNAAMILSRPL---GLD--PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N AM LS+ + G++ P I I P ++ + +AG GF+N++LS + Sbjct: 45 GDYQCNNAMGLSKKMKDEGINKSPRDIGLEIQRCCPASPIIEKIEVAGPGFVNIFLSKEF 104 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 L+ ++ G++ + ++ ++F S N MHVGH R ++G++++ L+ F Sbjct: 105 AVSSLTRMLREGVKPPKV---PRKRILVDFSSPNIAKQMHVGHLRSTIIGESISRLLEFL 161 Query: 158 GYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQALYNNDSDLPE 198 ++V R ++ D G Q L L F++ + ++ D + Sbjct: 162 QHDVIRINHLGDWGTQFGMLIAHLEDRFPNFLNESPPIGDLQEFYKESKKRFDADESFKK 221 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y V G+ A K W Q + + R + + + + D+ Sbjct: 222 RAYNRVVTLQSGEPAATK-----------AW---------QQICDVSRKEFQKIYDRLDV 261 Query: 259 FISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315 I E RG+ S + +++ L +G + ++D + + + Sbjct: 262 TIQE----RGESYYQSRMLTVVEFLRNKGLL----------------ELDDGREIMWPDV 301 Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN-MIYVMGSDHSGYVKRLEAVAAAV 374 + ++KSDG +TY +D+A +C+ E +IYV+ + S + + A Sbjct: 302 NKSGIPLTIVKSDGGFTYDTSDMAAIRCRLEEDLATWLIYVVDAGQSTHFHGIFKAA--- 358 Query: 375 SEKKAQINVLLCEL------VRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416 E+ +N + + V L DG K R+GD + L ++DE Sbjct: 359 -ERAGILNPNIHRVDHVQFGVVLGEDGK--KFKTRSGDTVKLSDLLDEGLKYSLKQLQER 415 Query: 417 -----------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459 V +++ L F F K+ + + N Y+ Y Y Sbjct: 416 GRDQILTPNELVEAQEAVAYGCIKYTDLCHNRISDYIFSFDKMLD-DRGNTAVYLLYTYT 474 Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 R SI R + + F +L ++ + I E E E +L+ L + V+ + Sbjct: 475 RICSIARNSGEDFSNLA-EILDKFQIVLEHE---KEWKLVKTLLKLHDVLMKCANGLFLH 530 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR----KLTMMRLQLVHAVASIINSGLN 575 L + Y++ +VF + + ++ N K+ R+ + A A+++ + + Sbjct: 531 FLCEFCYEVCTVFAEFYDN------CYCIEKNKAGEICKINHSRILICEATAAVLRTCFH 584 Query: 576 IIGVE 580 I+G++ Sbjct: 585 ILGLK 589 >gi|313224957|emb|CBY20749.1| unnamed protein product [Oikopleura dioica] Length = 653 Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/146 (29%), Positives = 75/146 (51%), Gaps = 6/146 (4%) Query: 37 PRDCAHGHLSTNAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 P+ G N++M ++ L + P +A+ I+ I + + IAG GFIN+ Sbjct: 97 PKQEKFGDYQCNSSMQIAGMLKDAGEKIAPRDVAKKILDNIPSNNLIKETTIAGPGFINV 156 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 ++ Y+ + + G++Y ++ +G KV +++ S N MHVGH R ++GD++A Sbjct: 157 FMCQKYMVNRIGELNNLGVQYDKSK-SRGRKVVVDYSSPNIAKEMHVGHLRSTIIGDSIA 215 Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177 +L GYEV R ++ D G Q L Sbjct: 216 NLFEAYGYEVLRINHVGDWGTQFGML 241 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 62/306 (20%), Positives = 124/306 (40%), Gaps = 51/306 (16%) Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVA---- 371 G ++ ++K+ G YTY +DL + E D +IYV+ + +++ A A Sbjct: 362 GIEIPLTVVKTGGGYTYDTSDLTALNYRVNEIKGDILIYVVDCGQELHFRQVFAAASKAG 421 Query: 372 ----AAVSEKKAQINVLLCELVRLY--RDGMPIKMS-------KRAGDFI---------- 408 A + A V+L E + + R G +++ KRA D + Sbjct: 422 FYDAAQTRVEHAGFGVVLGEDKKKFKTRSGETVRLVDLLDEGIKRANDQLLERGREKELT 481 Query: 409 --TLRHVVDEVGSDSVRFMMLW--RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 ++ D V +++ L RKN + FD + N Y+ Y R RS+ Sbjct: 482 AQEMKDAADAVAYGCIKYADLKSNRKNDYVFSFDQML---DIRGNTAAYLLYQLTRIRSV 538 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTS---ELQLIVHLAEYPRVIENATIAQEPYKL 521 R+ + D + + I +FD + E +L + + ++ A + + Sbjct: 539 NRKVEGKITDEEI-----SKIATSGQFDLADPREFKLAKTILRFHEILSQAQRDLLIHPI 593 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRK--LTMMRLQLVHAVASIINSGLNIIGV 579 ++YDL++ F + + ++ + K + + RL L A AS++ + I+G+ Sbjct: 594 CEWMYDLSNAFSQFYD------KCYIIEKKDGKEEIKVGRLILASATASVMEAAFKILGI 647 Query: 580 ESPNEM 585 + ++M Sbjct: 648 RTLHKM 653 >gi|315046758|ref|XP_003172754.1| arginyl-tRNA synthetase [Arthroderma gypseum CBS 118893] gi|311343140|gb|EFR02343.1| arginyl-tRNA synthetase [Arthroderma gypseum CBS 118893] Length = 634 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 148/623 (23%), Positives = 236/623 (37%), Gaps = 152/623 (24%) Query: 46 STNAAMILS----RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK- 100 +TNA ++L + G++P +A+ IV++ P ++ +A F+ L SP L Sbjct: 67 ATNADLMLVTARLKLKGINPKQLAQDIVSKFPSTPLLNPP-VANGIFVPLSFSPDTLPNL 125 Query: 101 ILSSIVVSGIEYGRNLI-----------GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 IL I YG N + GK KV +EF S N H GH R ++G Sbjct: 126 ILPFIFDRRASYGSNQLQGLQDPKDESSGK-KKVIVEFSSPNIAKEFHAGHLRSTIIGAY 184 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 +++L G++V R Y+ D G Q LA V W+ + E + LKH+ Sbjct: 185 ISNLYESMGWDVVRVNYLGDWGKQFGLLA--VGWQRFGS---------EELFAKEPLKHL 233 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 E+ K +S L PE++ +D + K L + + F + GD Sbjct: 234 -LEVYAKINS--LFAPEKEASEQARDRGEDTS----EIESKGLFAERNAFFQK--MEDGD 284 Query: 270 PSPI------RDI-----IDNLARQGY---VYEGILPPPKSKTTQKCDMDRKQLLFRSTM 315 P I RD+ I AR VY G T + +++ +LL + Sbjct: 285 PDAIALWKRFRDVSIERYISTYARLNIKFDVYSG------ESTVKALTVEKAELLLKEKG 338 Query: 316 V--------------------GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIY 354 V G V R + G+ TY D+A + E+ FD MIY Sbjct: 339 VYTEDNGTWIIDFKKHGAPNLGIAVARTRI---GTTTYLLRDVAAVLERVEKYQFDKMIY 395 Query: 355 VMGSDHSGYVKRLEAVAAA-----VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 V+ ++ Y +RL V+ K +N G MS R G Sbjct: 396 VVSTEQDLYFQRLFKTIELMGYPDVAAKLEHVNF-----------GKVQGMSSRLGTVKI 444 Query: 410 LRHVVDEVGSDSVRFMMLWRKN----------SELLD---------------------FD 438 L ++DE GS M RKN +E+ D FD Sbjct: 445 LSDILDECGSAMHNVM---RKNPTKYDQIEKPAEVADILGITAVMVQDMAGKRIHNYPFD 501 Query: 439 FCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF--DTSE 495 K+ + P Y+QYA+AR SI R+ D+ P+ + + Sbjct: 502 IAKMTSFEGDTGP--YLQYAHARLCSIVRKV---------DIDPQEITTANFSLLKEPHA 550 Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555 + ++ +A+YP V NA EP YL+ LA + ++ + A + ++ Sbjct: 551 INILRLMAQYPDVTCNALKTLEPTTTLTYLFRLAHQVSSGYD------VIKVIGAESHEV 604 Query: 556 TMMRLQLVHAVASIINSGLNIIG 578 T+ RL L ++ +G+ ++G Sbjct: 605 TVARLALYEGARQVLENGMRLLG 627 >gi|281343256|gb|EFB18840.1| hypothetical protein PANDA_015081 [Ailuropoda melanoleuca] Length = 548 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 129/575 (22%), Positives = 242/575 (42%), Gaps = 108/575 (18%) Query: 54 SRP-LGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIE 111 SRP + + + +AE ++K D V + G+G +N ++ L K +L ++ G + Sbjct: 27 SRPDIQVQAMRLAE----KLKCDTVVSEI-STGQGTVNFKINRELLTKTVLQQVINDGSK 81 Query: 112 YG-RNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167 YG ++ + G K+ +EF S N HVGH R ++G+ +A+L G++VTR Y+ Sbjct: 82 YGLKSELFSGLPQKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVTRINYL 141 Query: 168 NDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-----KYSSEL 221 D G Q L + Y++ L +N P + VY++ V KE D K + E Sbjct: 142 GDWGMQFGLLGTGFQLFGYEEKLQSN----PLQHLFEVYVQ-VNKEATDDKNIAKSAHEF 196 Query: 222 ---LNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275 L + + L + +D S++ ++I K L + + + S + F+R + Sbjct: 197 FQRLELGDTQALALWQKFRDLSIEEYVRI----YKRLGVHFNEY-SGESFYREKSQEVLK 251 Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR-PLLKSDGSYTYF 334 ++D+ +G+L K T D+ GD +++SDG+ Y Sbjct: 252 LLDS--------KGLLQKT-VKGTAVVDLSGN---------GDPSSICTVMRSDGTSLYA 293 Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393 DLA + ++ FD MIYV + +++ + + A E R Sbjct: 294 TRDLAAAIDRMDKYNFDTMIYVTDKGQKKHFQQVFQMLQIMGYDWA-------ERCRHVP 346 Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL-----------------LD 436 G+ M R G+ L V++E+ S ++ M + EL D Sbjct: 347 FGVVQGMKTRRGNVTFLEDVLNEIRSRMLQNMASIKTTRELENPQETAERVGLAALIIQD 406 Query: 437 FDFCKVKE---------QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487 F + + QS+ + ++QY +AR S+ ++ F + F + Q Sbjct: 407 FKGLLLSDYQFSWDRVFQSRGDTGVFLQYTHARLHSL----EETFGCGYLNDFNTGCL-Q 461 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD---LASVFHGHWSHGRENPR 544 E + + ++ HL + V+ ++ +P + YL LA+V H + Sbjct: 462 EPQ----SVSILQHLLRFDEVLYRSSQDLQPRHIVSYLLTLSHLAAVAH----------K 507 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 F++ + ++ RL L AV S++ +G+ ++G+ Sbjct: 508 TLFIKDSPPEVAGARLHLFRAVRSVLANGMKLLGI 542 >gi|254388302|ref|ZP_05003537.1| arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|294814347|ref|ZP_06772990.1| Arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|326442738|ref|ZP_08217472.1| arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|197702024|gb|EDY47836.1| arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|294326946|gb|EFG08589.1| Arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] Length = 587 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 80/295 (27%), Positives = 130/295 (44%), Gaps = 51/295 (17%) Query: 323 PLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRL-EAVAAAVSEKK 378 PL+ KS+G Y Y A DL+ + + +R G D +IYV+ + S + K + E A + Sbjct: 312 PLIVRKSNGGYGYAATDLSAIRDRVQRLGADTLIYVVDARQSLHFKMVFETARRAGWLGE 371 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 V L L DG P K R G+ + L ++DE Sbjct: 372 GVKAVQLAFGTVLGSDGKPFKT--REGETVRLVDLLDEAIDRASAVVREKARDLTDEEIA 429 Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VG +V++ L + FD ++ + + V Y+QYAYAR +SI R+A ++ Sbjct: 430 ERGTQVGIGAVKYADLSTSAARDYKFDLDQMVSLNGDTSV-YLQYAYARIQSIKRKAGEV 488 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 P +L +E L +HL ++ I A EP+KLA YLY LAS Sbjct: 489 RPKAHPEL----------ALAPAERALGLHLDQFAETIAEVAAAYEPHKLAAYLYQLAS- 537 Query: 532 FHGHWSHGRENPRLRFVQANN-RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H + R + + + A N ++ RL L+ A ++ G+ ++G+ +P + Sbjct: 538 ---HLT--RFYDQCQVLSAENPPEVVENRLFLIDLTARTLHQGMGLLGIRTPERL 587 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 1/133 (0%) Query: 45 LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104 N + L++ L +P +A +V I + + + ++G GF+N+ L+ + + L++ Sbjct: 41 FQANGILALAKKLKGNPRELAAQVVDAIGENDVLKEIEVSGPGFLNITLTDGAIVRTLAA 100 Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164 G L I++ N MHVGH R AV+G + ++ F+G V R Sbjct: 101 RAADD-RLGVPLRDHPGTTVIDYAQPNVAKEMHVGHLRSAVIGAAMTEILEFTGETVVRR 159 Query: 165 YYINDAGAQINTL 177 ++I D G Q L Sbjct: 160 HHIGDWGTQFGML 172 >gi|301114575|ref|XP_002999057.1| arginyl-tRNA synthetase, putative [Phytophthora infestans T30-4] gi|262111151|gb|EEY69203.1| arginyl-tRNA synthetase, putative [Phytophthora infestans T30-4] Length = 815 Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 13/169 (7%) Query: 19 DCKIKVEKKILDRIVIERPR----DCAHGHLSTNAAMILSRPL------GLDPLTIAELI 68 D IK LD +E R + G N+AM + L P +A I Sbjct: 242 DAAIKAAYPGLDVPPVEVTRTNVKNAKFGDYQCNSAMSIFTALKGTPNAARSPRDVANTI 301 Query: 69 VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128 +A + +D + +AG GFIN +L+ ++ L +++ +G++ K + ++F Sbjct: 302 IAAMPETRVLDRLTVAGAGFINAFLTKEFVAARLQNVLANGVQPAPQ---KKQTIVVDFS 358 Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 S N MHVGH R ++GDT++ ++ F GY+V R ++ D G Q L Sbjct: 359 SPNIAKDMHVGHLRSTIIGDTMSRILEFQGYDVKRINHVGDWGTQFGML 407 >gi|195175085|ref|XP_002028293.1| GL14083 [Drosophila persimilis] gi|194117430|gb|EDW39473.1| GL14083 [Drosophila persimilis] Length = 664 Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 93/399 (23%), Positives = 170/399 (42%), Gaps = 63/399 (15%) Query: 42 HGHLSTNAAMILSRPL---GLD--PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS 96 +G N AM L++ + G++ P IA + + P ++ + + G GF+N+YLS Sbjct: 114 YGDYQCNNAMGLAKKMKEMGVNRTPRDIANELQKCCPLSPIINKLEVGGAGFVNVYLSKD 173 Query: 97 YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 Y + L +I+ +GI+ R L +V ++F S N MHVGH R ++G+++ L+ F Sbjct: 174 YAAQSLKNILRNGIKPPRVL---KRRVLVDFSSPNIAKQMHVGHLRSTIIGESVCRLLEF 230 Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216 ++V R ++ D G Q L + R+ L + P G Y KE + Sbjct: 231 LQHDVIRINHLGDWGTQFGMLIAHLEDRFPDFL---NKSPPIGDLQSFY-----KESKKR 282 Query: 217 YSSELLNFPEEKWLPIVKDYS--------VQAMMKIIRDDLKALNIQHDIFISE--DDFH 266 + +E F + + +V S Q + + R + +A+ + D+ + E + F+ Sbjct: 283 FDTE-EEFKKRAYNRVVSLQSGEPNSRKAWQLICDVSRQEFQAIYDRLDVTLRERGESFY 341 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 + + D + N + +L + + + DR + ++K Sbjct: 342 QSRMLSVVDFLRN--------KNMLEHDEGRQIMWPNEDRSGIPL-----------TIVK 382 Query: 327 SDGSYTYFAADLAYFKCKYERGFDN-MIYVMGSDHSGYVKRLEAVA--------AAVSEK 377 SDG +TY +D+A + + E +IYV+ S S + + A A Sbjct: 383 SDGGFTYDTSDMAAIRHRIEEEHCTWIIYVVDSGQSTHFNTIFKAAERCCILNPTAHRVH 442 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 Q V+L E DG K R+GD + L +++E Sbjct: 443 HVQFGVVLGE------DGKKFKT--RSGDTVKLSDLLNE 473 >gi|319952158|ref|YP_004163425.1| arginyl-tRNA synthetase [Cellulophaga algicola DSM 14237] gi|319420818|gb|ADV47927.1| arginyl-tRNA synthetase [Cellulophaga algicola DSM 14237] Length = 592 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 131/578 (22%), Positives = 222/578 (38%), Gaps = 90/578 (15%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P+ I I A + + S F KGF+NL ++ ++ +I + +G Sbjct: 53 NPVQIGNEIGAYLVQEVAEVSGFNVIKGFLNLVITDAHYLADFKTIAAN-TTFGFVEQDA 111 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTL 177 V +E+ S N P+H+GH R ++G +A ++ SG +V + IND G I + L Sbjct: 112 SNAVMVEYSSPNTNKPLHLGHVRNNLLGYAVAEILKASGKKVYKTQIINDRGIHICKSML 171 Query: 178 ALSVFWRYQQALYNN-DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV--- 233 A F + + D G Y + K E+AD + L EK PI+ Sbjct: 172 AWQKFGKGETPESTGLKGDKLVGNYYVAFDKAYKVEIADLVAGGLAKEAAEKQAPILLEA 231 Query: 234 ---------KDYSVQAMMKIIRD--------DLKALNIQHDIFISEDDFHRGDPSPIRDI 276 D V ++ K + K L + D E D + Sbjct: 232 KQMLLKWEAGDEEVVSLWKTMNQWVYKGFAVTYKNLGVDFDTLYYESDTY---------- 281 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336 L + V EG+ KT + + T G D ++ +L+SDG+ Y Sbjct: 282 ---LLGKDVVAEGL------KTGVFFKKEDGSVWIDLTDEGLD-EKIVLRSDGTAVYMTQ 331 Query: 337 DL--AYFKCKYERGFDNMIYVMGSDHSGYVKRL----EAVAAAVSEKKAQINVLLCELVR 390 D+ A + K M+Y +G++ + K L + + + S+ ++ + +L Sbjct: 332 DIGTAIQRVKDNPDVSGMVYTVGNEQDYHFKVLFLILKKLGFSWSKNLFHLSYGMVDLPS 391 Query: 391 ---LYRDGMPI-------KMSKRAGDFIT----LRHVVDEVGSDSVRFMMLWRKNSELLD 436 R+G + +M+ AG+ L D D + + L +L Sbjct: 392 GKMKSREGTVVDADDLMQEMTTTAGEISQELGKLEDYSDAEKQDLYKMIGLGALKYYILK 451 Query: 437 FDFCK---------VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487 D K V Q P ++QY YAR +SI R+A+++ N Sbjct: 452 VDPKKRILFDPEESVDFQGNTGP--FIQYTYARIQSILRKAEEL---------SLNGFAG 500 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 + E +LI L YP I+ A P +A Y YDL F+ + +N + Sbjct: 501 LTTLHEKEKELIKQLQGYPEAIQLAAANYSPALVANYTYDLVKEFNSFY----QNVSILG 556 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++K R+QL V+ +I S ++G+E P M Sbjct: 557 EEEEHKK--AFRIQLSKKVSEVIQSSFKLLGIEVPERM 592 >gi|323651380|gb|ADX97536.1| arginyl-tRNA synthetase [Terra1 virus] Length = 438 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 76/303 (25%), Positives = 137/303 (45%), Gaps = 54/303 (17%) Query: 318 DDVDRPLL--KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374 D+ + PL+ KSDG +TY +DLA K ++ E+ D +IYV+ S S + + + +A + Sbjct: 155 DEFEIPLILVKSDGGFTYDTSDLAAIKYRFMEQKVDRVIYVVDSGQSQHFQMIFKLANQL 214 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434 S K + + V L +G +K R+G+ + LR V+ +V ++ R+N + Sbjct: 215 SWCKNEQCYHIGFGVILGNNGKRLK--TRSGETVLLRDVLQQVQDRAILVTKSLRQN-DT 271 Query: 435 LDFDFCKVKE----------------------------QSKENPVFYVQYAYARCRSIFR 466 L+ D K+ + +K N Y+ Y ARC I R Sbjct: 272 LEHDISKISKIIANNCIKYSDLNNPRENNYRFDVDKMTNTKGNTAVYLMYTLARCHGILR 331 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 + ++ LD D+ + ++ DT L ++ L +Y IE + P+ + YLY Sbjct: 332 KISNLSVILDGDI-------EINDADTRCLAIL--LLKYVEFIEKSIKEHAPHYICNYLY 382 Query: 527 DLASVFHGHWSHGR----ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 +L+ +S+ R EN + +V N R++L+H I++ +IG+ES Sbjct: 383 ELSVQITKFYSNNRCLEIENGEIIYVYHN-------RIRLIHLAIIIMSKMFELIGLESV 435 Query: 583 NEM 585 ++ Sbjct: 436 EQI 438 >gi|222617773|gb|EEE53905.1| hypothetical protein OsJ_00455 [Oryza sativa Japonica Group] Length = 588 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 6/143 (4%) Query: 48 NAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 NA + SR G +P+ + + I + ++S+ +AG G+IN+ LS +++ + + Sbjct: 52 NAMSVFSRIRGSATNFRNPMAVGQAIANNLPQSNIIESISVAGPGYINITLSSNWIAQRI 111 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 ++V GI+ ++ V ++F S N MHVGH R ++GDTLA + F+ EV Sbjct: 112 QDMLVCGIKTWAPILPVKRAV-LDFSSPNIAKEMHVGHIRSTIIGDTLAHMFEFTNVEVL 170 Query: 163 REYYINDAGAQINTLALSVFWRY 185 R ++ D G Q L +F ++ Sbjct: 171 RRNHVGDWGTQFGMLIEFLFEQF 193 Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%) Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS-KENPVFYVQYAYARCRSIFRQA 468 L + +G +V++ L KN+ L D+ F + S K N Y+QYA+AR SI R+A Sbjct: 430 LDRTSEAIGYGAVKYSDL--KNNRLTDYTFSFDQMLSDKGNTAVYLQYAHARICSIIRKA 487 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 L I + E L +HL ++ V+E A +P++L YLY L Sbjct: 488 SKDVEKLKMT----GAITLGHPY---ERFLGLHLIQFTEVVEQACADLQPHRLCDYLYSL 540 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 + F +++ Q RL L A I+ +++G+ Sbjct: 541 SLTFSKFYTN---------CQVVGSPEETSRLLLCEATGIIMRQCFHLLGI 582 >gi|298207765|ref|YP_003715944.1| arginyl-tRNA synthetase [Croceibacter atlanticus HTCC2559] gi|83850403|gb|EAP88271.1| arginyl-tRNA synthetase [Croceibacter atlanticus HTCC2559] Length = 592 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 122/563 (21%), Positives = 216/563 (38%), Gaps = 100/563 (17%) Query: 80 SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139 S F KGF+N+ +S Y I+ S +G +G V +E+ S N P+H+G Sbjct: 73 SAFNVVKGFLNIVISDLYYNAAFQEIL-SEKHFGFKK-AEGDAVMVEYSSPNTNKPLHLG 130 Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199 H R ++G +++ ++ SG V + IND G I L+ + ++ + + L Sbjct: 131 HIRNNLLGYSVSEILKASGKNVYKTQIINDRGIHICKSMLA-WQKFGKGETPESTGLKGD 189 Query: 200 YYPGVYLKHVGKELADKYSSELLNFPEEK----WLPIVKDYSVQAMMKI----------- 244 G Y KE + + + + EEK P++ + QAM+K Sbjct: 190 KLVGNYYVRFDKEYKKQVAEIVASGTEEKEAKTQAPLLLE--AQAMLKQWEAGDEDVVNL 247 Query: 245 -----------IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 + L + D + E D + +DII+ +G ++ Sbjct: 248 WKMMNGWVYKGFEETYTNLGVDFDTYYYESDTYLLG----KDIIETGLEKGVFFK----- 298 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL-LKSDGSYTYFAADL--AYFKCKYERGFD 350 K + CD+ D +D L L+SDG+ Y DL A + K Sbjct: 299 -KEDGSVWCDLTE-----------DGLDEKLVLRSDGTAVYMTQDLGTAVQRVKDYPDVG 346 Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI-- 408 MIY +G++ + K L + + A+ L L D KM R G + Sbjct: 347 GMIYTVGNEQDYHFKVLFLILQKLGYSWAE---YLYHLSYGMVDLPSGKMKSREGTVVDA 403 Query: 409 ------------TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF---- 452 TL + ++ S K L + +K K+ +F Sbjct: 404 DDLMVDMTQTAKTLSEDLGKLDGYSAEEKEELYKTIGLGALKYYILKVDPKKRILFNPEE 463 Query: 453 ----------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 ++QY YAR +SI R++K + + P+++ P+E E L+ + Sbjct: 464 SVDFQGNTGPFIQYTYARIQSILRKSK-LDTNAPVAETPKSLHPKEKE-------LLKIM 515 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 ++P VI+ A P +A Y YDL F+ + + + + ++ L R+ L Sbjct: 516 LQFPEVIQQAAQQHSPALIANYTYDLVKEFNSFYQN------VTILGTDDEVLKTFRVAL 569 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 V+ +I +++G++ P M Sbjct: 570 SFKVSELIKDAFSLLGIQVPVRM 592 >gi|298242069|ref|ZP_06965876.1| Arginine--tRNA ligase [Ktedonobacter racemifer DSM 44963] gi|297555123|gb|EFH88987.1| Arginine--tRNA ligase [Ktedonobacter racemifer DSM 44963] Length = 682 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 3/129 (2%) Query: 57 LGLDPLTIAELIVARIKI--DPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYG 113 LG PL IAE + I P++++V GF+N L+ + + R I+ ++ G ++G Sbjct: 65 LGRPPLQIAEALATYINELHVPELENVNATKPGFVNFRLNRAGVGRSIIERVLEEGPDFG 124 Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173 +N +G ++ +E + N HVGH R + +GDT+ ++ GY V E YI+D+G Q Sbjct: 125 QNEVGLNQRIIVEHTAINTNKAAHVGHLRNSCLGDTVVRMLRSQGYHVEAENYIDDSGVQ 184 Query: 174 INTLALSVF 182 + + + + Sbjct: 185 VADVVVGML 193 Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 11/164 (6%) Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 + + ++R+ M+ +++ D +V + + V Y+QY+YAR SI R+ + + Sbjct: 525 LAASAIRYFMIRFNLQQIITLDIDEVLRPNGDTGV-YLQYSYARSNSILRRLQASGYTIP 583 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 L N +P+ + + SE +L+ H+ YPR + A LA Y YDLA+ + Sbjct: 584 TRL---NGLPE--QLEQSEWELLRHIDAYPRRLAEAAEQMSASALAAYAYDLAAHISDFY 638 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 H P + V+ N ++ R LV A +N+ L I+G E Sbjct: 639 EH---TPPI--VKEENEQMKAFRALLVQATVQTMNNVLRILGFE 677 >gi|78778575|ref|YP_396687.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312] gi|109895016|sp|Q31CZ4|SYR_PROM9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|78712074|gb|ABB49251.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312] Length = 604 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 134/602 (22%), Positives = 236/602 (39%), Gaps = 102/602 (16%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAE----LIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98 G N + LS+ P I+E L+ I S+ IAG GFIN+ L L Sbjct: 46 GDYQCNVCLCLSKIYKKKPREISEDFVYLLNKNKSISKLCKSLEIAGPGFINIKLKDEVL 105 Query: 99 -RKILSSIVV--SGIEYGRNLIGKG--TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 +I S+I +GI + + G KV ++F S N MHVGH R ++GD+++ + Sbjct: 106 INEIKSNIQCPRAGIPLIKKDLDSGLSNKVIVDFSSPNIAKEMHVGHLRSTIIGDSISRI 165 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK-- 211 GY+V R ++ D G Q L + + LY+ND L+ +GK Sbjct: 166 FELRGYQVLRLNHVGDWGTQFGMLITQL-----KDLYSND------------LEEIGKIK 208 Query: 212 --ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 +L + Y + F E + S + ++K+ D K++ + D R + Sbjct: 209 ISDLVEFYKASKKRFDNESEF---QKRSREEVVKLQSGDSKSIQAWKLLC----DQSRKE 261 Query: 270 PSPI-RDIIDNLARQGYVY-----EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323 I +++ + +G + + ++ K K D K + + P Sbjct: 262 FDEIYKNLKIKIKERGESFYNPFLKSVIEDLKFKKILIEDQGAKCVFLDGMTNKEGKPLP 321 Query: 324 LL--KSDGSYTYFAADLAYFKCKYERGFDN-----MIYVMGSDHSGYVKRLEAVAAAVS- 375 L+ K DG + Y DLA + ++ + + +IYV + + + VA Sbjct: 322 LIVQKKDGGFNYATTDLAAIRYRFNKAPNGDDASRIIYVTDHGQANHFAGVFQVAKKAKW 381 Query: 376 -EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------ 416 K Q++ + LV+ DG +K R G+ I L+ +++E Sbjct: 382 IPDKCQVDHVPFGLVQGI-DGKKLKT--REGETIRLKDLLNEAVRRAKEDLLKRLEDEDR 438 Query: 417 -------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463 +G +V++ L + F F K+ + N Y+ Y R Sbjct: 439 YETEEFIANTSRIIGLGAVKYADLSQNRITNYQFSFDKMLSLNG-NTAPYLLYTLVRISG 497 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ ++ DF I E + SE +LI L ++ VI + P +L Sbjct: 498 IKRKNDFVYDSEDF-----QYINYEHK---SEWKLIRKLLKFDEVIISIEKDLMPNRLCN 549 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 YL++L F+ + + P L+ + + + RL L A + L ++G+E+ Sbjct: 550 YLFELCQTFNRFYD---QVPILK----EEKNIKISRLNLCDLTAKTLKLSLELLGIETLE 602 Query: 584 EM 585 M Sbjct: 603 RM 604 >gi|9757672|dbj|BAB08191.1| unnamed protein product [Oryza sativa Japonica Group] Length = 605 Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 6/143 (4%) Query: 48 NAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 NA + SR G +P+ + + I + ++S+ +AG G+IN+ LS +++ + + Sbjct: 64 NAMSVFSRIRGSATNFRNPMAVGQAIANNLPQSNIIESISVAGPGYINITLSSNWIAQRI 123 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 ++V GI+ ++ V ++F S N MHVGH R ++GDTLA + F+ EV Sbjct: 124 QDMLVCGIKTWAPILPVKRAV-LDFSSPNIAKEMHVGHIRSTIIGDTLAHMFEFTNVEVL 182 Query: 163 REYYINDAGAQINTLALSVFWRY 185 R ++ D G Q L +F ++ Sbjct: 183 RRNHVGDWGTQFGMLIEFLFEQF 205 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%) Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS-KENPVFYVQYAYARCRSIFRQA 468 L + +G +V++ L KN+ L D+ F + S K N Y+QYA+AR SI R+A Sbjct: 447 LDRTSEAIGYGAVKYSDL--KNNRLTDYTFSFDQMLSDKGNTAVYLQYAHARICSIIRKA 504 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 L I + E L +HL ++ V+E A +P++L YLY L Sbjct: 505 SKDVEKLKMT----GAITLGHPY---ERFLGLHLIQFTEVVEQACADLQPHRLCDYLYSL 557 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 + F +++ Q RL L A I+ +++G+ Sbjct: 558 SLTFSKFYTN---------CQVVGSPEETSRLLLCEATGIIMRQCFHLLGI 599 >gi|225024090|ref|ZP_03713282.1| hypothetical protein EIKCOROL_00958 [Eikenella corrodens ATCC 23834] gi|224943115|gb|EEG24324.1| hypothetical protein EIKCOROL_00958 [Eikenella corrodens ATCC 23834] Length = 572 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 124/587 (21%), Positives = 234/587 (39%), Gaps = 80/587 (13%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 +V++ ++ G N M ++ +P +A+ + + + S +AG GFINL Sbjct: 25 VVLQPAKNPEFGDFQINGVMGAAKQRKQNPRELAQKVADALANSELIASAEVAGPGFINL 84 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+P +L K + + + S G + I++ S N MHVGH R +++GD+L Sbjct: 85 RLNPQFLAKQVHAALQSS-RLGVAQAAAPQTIIIDYSSPNLAKEMHVGHLRSSIIGDSLN 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH--- 208 + +F G+ V + ++ D G Q L + + Q + +DL E +Y ++ Sbjct: 144 RVHSFLGHRVIAQNHVGDWGTQFGMLVAYLVEQQAQNEHFELADL-EQFYRNAKVRFDED 202 Query: 209 -VGKELADKYSSELLNFPEEK---WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 + A +Y +L + E W V + S+Q K+ L L + D ++ + Sbjct: 203 PAFADTAREYVVKLQSGDEAVLALWRQFV-EISLQHAEKVYA-KLGLLLTRED--VAGES 258 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 + D P ++++L +G E +K + K+ G+ + Sbjct: 259 KYNDDLQP---VVNDLIAKGLAVE----DDGAKVVFLDEFKNKE--------GEPAAYIV 303 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDN-MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383 K G + Y DLA + R N ++YV+ + +L A +++ Sbjct: 304 QKKGGGFLYSTTDLACIRDYVGRLKGNRLLYVVDHRQGLHFGQLFAT--------SRLAG 355 Query: 384 LLCELVRLYRDGMPIKMSK-------RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 L E V+ G M K R+GD + L ++DE + ++ KN EL D Sbjct: 356 YLPENVKAEFIGFGTMMGKDGKPFKTRSGDTVKLVELLDEAVERAT--ALVKEKNPELDD 413 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCR-------SIFRQAKDIFPDLDFDLFP-RNVIPQE 488 ++ V Y + R ++ + P L + ++V+ + Sbjct: 414 ATAAQIGRSVGIGAVKYADLSKNRTSDYIFDWDNMLSFEGNTAPYLQYAYTRVQSVLKKA 473 Query: 489 SEFDTSE---------LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 E+ +E QL L ++ V++ + P+ LA YLY +AS+F Sbjct: 474 GEWSRTEQPVFTEPLECQLAAELLKFEDVLQTVADSSYPHYLAAYLYQVASLFS------ 527 Query: 540 RENPRLRFVQA-----NNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 RF +A + RLQL + +GL+++G+++ Sbjct: 528 ------RFYEACPILKAEGSVRNTRLQLAALTGQTLQTGLSLLGIDT 568 >gi|297838167|ref|XP_002886965.1| hypothetical protein ARALYDRAFT_894178 [Arabidopsis lyrata subsp. lyrata] gi|297332806|gb|EFH63224.1| hypothetical protein ARALYDRAFT_894178 [Arabidopsis lyrata subsp. lyrata] Length = 623 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 1/125 (0%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P + + ++ + V+S IAG GF+N+ LS ++ K + ++++ GI+ + Sbjct: 106 PPAVGQALIKNLPSSEMVESCSIAGPGFVNVVLSAKWIAKSIENMLIDGIDTWAPTLSVK 165 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 V ++F S N MHVGH R ++GDTLA ++ +S EV R ++ D G Q L Sbjct: 166 RAV-VDFSSPNIAKEMHVGHLRSTIIGDTLARMLEYSKVEVLRRNHVGDWGTQFGMLIEF 224 Query: 181 VFWRY 185 +F ++ Sbjct: 225 LFEKF 229 >gi|297157207|gb|ADI06919.1| arginyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1] Length = 332 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 53/201 (26%), Positives = 98/201 (48%), Gaps = 16/201 (7%) Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 CE+ +G + + AG I+ ++ +GSD+ R+ +L +L D D ++ Q Sbjct: 147 CEVA----EGGAVLAVRPAG--ISAEELLGLLGSDASRWALLRAAAHDLPDLDPGRLLAQ 200 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAE 504 + NP+F V+YA++R R++ R D+ D P + +S +D + + LI L + Sbjct: 201 RESNPLFRVRYAHSRVRALLRNGVDLGVD------PDSSRSADSAYDHPTAVALISLLGD 254 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 YPR++E+A + P +LA +L A F + P L + RL L Sbjct: 255 YPRLLESAARHRAPDRLARHLEATADAF---FRFHDACPPLPRGEQKPLAAHRSRLALAE 311 Query: 565 AVASIINSGLNIIGVESPNEM 585 A +++ GL+++G+ +P + Sbjct: 312 AAGTVLAGGLHLLGISAPEHL 332 Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust. Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 5/101 (4%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLD-----PLTIAELIVARIKIDPDVDSVFIA 84 +R+ ++ P G +TN A+ L++ + D L +AE++ R+ + P + V IA Sbjct: 21 ERVKVQAPPRAGCGDYATNVALQLAKLVKGDGGPAVALRVAEVLRRRLVVTPGIAGVEIA 80 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 G GF+N+ + ++ ++ G +YGR+ GT V + Sbjct: 81 GPGFLNITVDSGGHAALVRGVLERGEDYGRSDALAGTLVRL 121 >gi|123965451|ref|YP_001010532.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515] gi|123199817|gb|ABM71425.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515] Length = 602 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 148/644 (22%), Positives = 257/644 (39%), Gaps = 106/644 (16%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKK----ILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58 ++ + + R + L ++ IK EKK + + +I + G N ++LS+ Sbjct: 4 IYQELTKRFEETL--LESLIKNEKKEEFENIRKNLINQASKEEFGDYQCNICLVLSKIYK 61 Query: 59 LDPLTIAELIVARIKIDPDV----DSVFIAGKGFINLYLSPSYL-RKILSSIVV--SGIE 111 +P IA V ++K + ++ +++ IAG GFIN+ L + L KI S+I +G+ Sbjct: 62 RNPREIAIEFVQKLKENKEISNLCEALEIAGPGFINIKLKNNLLIAKIKSNIKCPRAGVP 121 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 N KV ++F S N MHVGH R ++GD++A + GY V R ++ D G Sbjct: 122 LSNNNSHSQKKVIVDFSSPNIAKEMHVGHLRSTIIGDSIAKIFELRGYTVLRLNHVGDWG 181 Query: 172 AQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYSSELLNFP-- 225 Q L + Y L D SDL E Y E + E++ Sbjct: 182 TQFGMLITQLKDLYSSDLREIDKITISDLVEFYKASKKRFDNETEFKKRSREEVVKLQSG 241 Query: 226 EEKWLPIVKDYSVQAMMKIIRDDL-KALNIQHDIFISEDDFHRGDP--SP-IRDIIDNLA 281 ++K + K Q+ + D++ K LNI+ I E RG+ +P ++ II++L Sbjct: 242 DKKSIKAWKLLCNQSRKEF--DEIYKILNIK----IKE----RGESFYNPFLKSIIEDLT 291 Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLA 339 + + E D K + + PL+ K DG + Y DLA Sbjct: 292 FKKILVE--------------DQGAKCVFLHGMTNKEGNPLPLIIKKKDGGFNYATTDLA 337 Query: 340 YFKCKY--ERGFDN---MIYVMGSDHSGYVKRLEAVAAAVS--EKKAQINVLLCELVRLY 392 + ++ E DN +IYV S + + VA + + ++N + LV+ Sbjct: 338 ALRYRFRKEPHGDNATRIIYVTDHGQSNHFAGVFQVAKRANWIPEDCEVNHVPFGLVQGI 397 Query: 393 RDGMPIKMSKRAGDFITLRHVVDE-------------------------------VGSDS 421 DG +K R GD I L+ ++ E +G + Sbjct: 398 -DGKKLKT--REGDIIKLKDLLSESIKRAKEDLLKRLEKESRFETEEFILNTSKVIGIGA 454 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 V++ L + F F K+ + N Y+ Y R I R+ +++ D Sbjct: 455 VKYADLSQNRITNYQFSFEKMLSLNG-NTAPYLLYTLVRISGINRK-----NNMNEDAVN 508 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 I + E +LI L ++ VI + P +L YL++L F+ + + Sbjct: 509 SESIAYSHDL---EWKLIRKLLKFDEVIVSIEKDLMPNRLCNYLFELCQSFNRFY----D 561 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V+ N + + RL L + L ++G++S M Sbjct: 562 QVSILKVEMNTK---ISRLTLCALTEKTLKLSLELLGIDSLERM 602 >gi|209560234|ref|YP_002286706.1| arginyl-tRNA synthetase [Streptococcus pyogenes NZ131] gi|229558814|sp|B5XJ77|SYR_STRPZ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|209541435|gb|ACI62011.1| Arginyl-tRNA synthetase [Streptococcus pyogenes NZ131] Length = 563 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 74/291 (25%), Positives = 130/291 (44%), Gaps = 51/291 (17%) Query: 323 PLLK-SDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV-------- 370 PL+K SDG+ + LA Y K Y+ F +YV+G++ + + K+L+AV Sbjct: 296 PLIKKSDGATLHITRALAPALYRKRTYD--FAKSVYVVGNEQAAHFKQLKAVLKEMGYDW 353 Query: 371 ---------------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 A +S +K + +LL V + ++ + + V Sbjct: 354 SDDMTHVAFGLVTKGGAKLSTRKGNV-ILLEPTVAEAINRAASQIEAKNPNLADKEAVAH 412 Query: 416 EVGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 VG +++F L DFD V + + P YVQYA+AR +SI R+A Sbjct: 413 AVGVGAIKFYDLKTDRMNGYDFDLEAMVSFEGETGP--YVQYAHARIQSILRKAD----- 465 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 F + S D ++I + ++PR+I+ + EP +A + +LA F+ Sbjct: 466 -----FTPSATTTYSLADAESWEIIKLIQDFPRIIKRTSDNFEPSIMAKFAINLAQSFNK 520 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H R + N+ + RL L +A A+++ L ++GV++PNEM Sbjct: 521 YYAH------TRILDDNSERDN--RLVLCYATATVLKEALRLLGVDAPNEM 563 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 41/149 (27%), Positives = 75/149 (50%), Gaps = 4/149 (2%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P++ G L+ A L++ L P IA + +I + + V G +IN + Sbjct: 26 LLETPKNSDMGDLAF-PAFSLAKVLRKAPQMIASELAEQID-ESQFEKVVAVGP-YINFF 82 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + ++L ++ +G +Y + G+G V I+ S N P +GH R V+GD+LA Sbjct: 83 LDKVKISSQVLEQVITAGSDYAQQDEGQGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALS 180 ++ A GY+ + ++ D G Q L ++ Sbjct: 143 NIFAKMGYQPVKINHLGDWGKQFGMLIVA 171 >gi|323651378|gb|ADX97535.1| arginyl-tRNA synthetase [Courdo11 virus] Length = 438 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 76/303 (25%), Positives = 137/303 (45%), Gaps = 54/303 (17%) Query: 318 DDVDRPLL--KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374 D+ + PL+ KSDG +TY +DLA K ++ E+ D +IYV+ S S + + + +A + Sbjct: 155 DEFEIPLILVKSDGGFTYDTSDLAAIKYRFMEQKVDRVIYVVDSGQSQHFQMIFKLANQL 214 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434 S K + + V L +G +K R+G+ + LR V+ +V ++ R+N + Sbjct: 215 SWCKNEQCYHIGFGVILGNNGKRLK--TRSGETVLLRDVLQQVQDRAILVTKSLRQN-DT 271 Query: 435 LDFDFCKVKE----------------------------QSKENPVFYVQYAYARCRSIFR 466 L+ D K+ + +K N Y+ Y ARC I R Sbjct: 272 LEHDISKISKIIANNCIKYSDLNNPRENNYRFDVDKMINTKGNTAAYLMYTLARCHGILR 331 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 + ++ LD D+ + ++ DT L ++ L +Y IE + P+ + YLY Sbjct: 332 KISNLSVILDGDI-------EINDADTRCLAIL--LLKYVEFIEKSIKEHAPHYICNYLY 382 Query: 527 DLASVFHGHWSHGR----ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 +L+ +S+ R EN + +V N R++L+H I++ +IG+ES Sbjct: 383 ELSVQITKFYSNNRCLEIENGEIIYVYHN-------RIRLIHLAIIIMSKMFELIGLESV 435 Query: 583 NEM 585 ++ Sbjct: 436 EQI 438 >gi|320035651|gb|EFW17592.1| arginyl-tRNA synthetase [Coccidioides posadasii str. Silveira] Length = 714 Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 131/605 (21%), Positives = 235/605 (38%), Gaps = 117/605 (19%) Query: 58 GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL- 116 G P +AE I A+ V+S AG + + + ++ SI+ + YG N Sbjct: 150 GRKPTDLAEEIAAKFPQSDLVESPKAAGTHLQFHFRAQPLIHTVIPSILENKATYGTNAN 209 Query: 117 IG--------KGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167 IG KG K + +EF S N P H GH R ++G LA+L G++V + Y+ Sbjct: 210 IGLRDPRDPSKGKKRIVVEFSSPNIAKPFHAGHLRSTIIGGFLANLYRIMGWDVIKMNYL 269 Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLKHVGKELADKYSSELLNF 224 D G Q LA +Y N+ +L P + VY+K + K++ ++ + Sbjct: 270 GDWGKQYGLLANGY------KMYGNEEELLKDPINHLFEVYVK-INKDVGEQ-EGPIKEL 321 Query: 225 PEEKWLPIVKDYSVQAMMKIIRD--DLKALNIQHDIFISEDDFHRGDPSPI------RDI 276 E+ L K V A+ K + D F S +D GD + RD+ Sbjct: 322 KEQIKLKKEKGEDVAALEKELETLVDASWDEKARRYFKSMED---GDEDALALWRRFRDL 378 Query: 277 IDNLARQGY--------VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--- 325 +Q Y VY G +S+ Q+ + + + V +D + ++ Sbjct: 379 SIEKYKQTYARLNIDFDVYSG-----ESQVKQES-LSKVYQTMQEKGVSEDSEGAIIVDF 432 Query: 326 --------------KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 + DG+ Y D+ A F+ FD M+YV+ + ++ +L Sbjct: 433 TKHGAKKLGKAIVVRKDGTPLYLTRDIAAIFERDETFHFDKMLYVVAAQQDLHLAQLFKT 492 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG--------SDSV 422 + K L E + GM MS R G L ++ +VG ++V Sbjct: 493 VELMGRKD------LAERCQHINFGMVRGMSTRKGTVKFLNDILKDVGDKMHEVMKKNAV 546 Query: 423 RFMMLWR--KNSELLDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRS 463 ++ + + ++ L V++ S + + Y+QYA+AR S Sbjct: 547 KYEQVQNPDETADTLGITSVMVQDMSGKRINGYEFNLEDMTSFEGDTGPYLQYAHARLCS 606 Query: 464 IFRQAK---DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520 + R+A+ + D L ++ + L+ L+++P V+ N+ EP Sbjct: 607 VNRKAEIDPSVLGSADLSLLT----------ESHAVDLVRLLSQWPDVVLNSMKTLEPTT 656 Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + YL+ + S G + + V + +L R+ L H ++N+G+ ++G+ Sbjct: 657 IITYLFRMTHTL----SSGYDTLK---VVGSEPELKKARMALYHCARQVLNNGMRLLGLN 709 Query: 581 SPNEM 585 M Sbjct: 710 PVERM 714 >gi|119190465|ref|XP_001245839.1| arginyl-tRNA synthetase [Coccidioides immitis RS] gi|303315135|ref|XP_003067575.1| arginyl-tRNA synthetase, cytoplasmic, putative [Coccidioides posadasii C735 delta SOWgp] gi|240107245|gb|EER25430.1| arginyl-tRNA synthetase, cytoplasmic, putative [Coccidioides posadasii C735 delta SOWgp] Length = 647 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 131/605 (21%), Positives = 235/605 (38%), Gaps = 117/605 (19%) Query: 58 GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL- 116 G P +AE I A+ V+S AG + + + ++ SI+ + YG N Sbjct: 83 GRKPTDLAEEIAAKFPQSDLVESPKAAGTHLQFHFRAQPLIHTVIPSILENKATYGTNAN 142 Query: 117 IG--------KGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167 IG KG K + +EF S N P H GH R ++G LA+L G++V + Y+ Sbjct: 143 IGLRDPRDPSKGKKRIVVEFSSPNIAKPFHAGHLRSTIIGGFLANLYRIMGWDVIKMNYL 202 Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLKHVGKELADKYSSELLNF 224 D G Q LA +Y N+ +L P + VY+K + K++ ++ + Sbjct: 203 GDWGKQYGLLANGY------KMYGNEEELLKDPINHLFEVYVK-INKDVGEQ-EGPIKEL 254 Query: 225 PEEKWLPIVKDYSVQAMMKIIRD--DLKALNIQHDIFISEDDFHRGDPSPI------RDI 276 E+ L K V A+ K + D F S +D GD + RD+ Sbjct: 255 KEQIKLKKEKGEDVAALEKELETLVDASWDEKARRYFKSMED---GDEDALALWRRFRDL 311 Query: 277 IDNLARQGY--------VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--- 325 +Q Y VY G +S+ Q+ + + + V +D + ++ Sbjct: 312 SIEKYKQTYARLNIDFDVYSG-----ESQVKQES-LSKVYQTMQEEGVSEDSEGAIIVDF 365 Query: 326 --------------KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 + DG+ Y D+ A F+ FD M+YV+ + ++ +L Sbjct: 366 TKHGAKKLGKAIVVRKDGTPLYLTRDIAAIFERDETFHFDKMLYVVAAQQDLHLAQLFKT 425 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG--------SDSV 422 + K L E + GM MS R G L ++ +VG ++V Sbjct: 426 VELMGRKD------LAERCQHINFGMVRGMSTRKGTVKFLNDILKDVGDKMHEVMKKNAV 479 Query: 423 RFMMLWR--KNSELLDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRS 463 ++ + + ++ L V++ S + + Y+QYA+AR S Sbjct: 480 KYEQVQNPDETADTLGITSVMVQDMSGKRINGYEFNLEDMTSFEGDTGPYLQYAHARLCS 539 Query: 464 IFRQAK---DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520 + R+A+ + D L ++ + L+ L+++P V+ N+ EP Sbjct: 540 VNRKAEIDPSVLGSADLSLLT----------ESHAVDLVRLLSQWPDVVLNSMKTLEPTT 589 Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + YL+ + S G + + V + +L R+ L H ++N+G+ ++G+ Sbjct: 590 IITYLFRMTHTL----SSGYDTLK---VVGSEPELKKARMALYHCARQVLNNGMRLLGLN 642 Query: 581 SPNEM 585 M Sbjct: 643 PVERM 647 >gi|160893430|ref|ZP_02074215.1| hypothetical protein CLOL250_00980 [Clostridium sp. L2-50] gi|156864825|gb|EDO58256.1| hypothetical protein CLOL250_00980 [Clostridium sp. L2-50] Length = 563 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 110/505 (21%), Positives = 206/505 (40%), Gaps = 72/505 (14%) Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 +G + G + I++ S N HVGH R ++G++L + + GY+V R ++ D G Sbjct: 100 FGGSDEGADKVICIDYSSPNVAKNFHVGHLRTTIIGNSLYKIYSKLGYKVIRINHLGDWG 159 Query: 172 AQINTLALSV-FWRYQQALYNND-SDLPEGYYPGVYLKHVGKELADKYSSEL--LNFPEE 227 Q L ++ W ++A+ + ++L Y EL D+ + + +E Sbjct: 160 TQFGKLIVAYKNWGTKEAVEKDGVAELMRLYVKFHEEADKNPELVDEARAWFSKMEHGDE 219 Query: 228 KWLPIVKDYSVQAMMKIIRD-DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286 + L I + + ++++ R DL L + D ++ E F+R +D++D L + Sbjct: 220 EALSIWQWFKDISLVEYKRTYDL--LGMDFDYYLGES-FYR---DKCQDVVDQLTNANLL 273 Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA-YFKCKY 345 E + D D + + K DGS Y DLA F K Sbjct: 274 KES----EGAMIVDLSDYDMAPCI-------------VTKKDGSSIYATRDLAAIFYRKN 316 Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405 F +YV G + + ++ V + A+ +++ + +G K+S R+G Sbjct: 317 TYHFTKCLYVTGQEQKLHFAQVFKVVELLGNDWAKDSLVHIPYGLVSLEGA--KLSTRSG 374 Query: 406 DFITLRHVVDE-------------------------VGSDSVRFMMLWRKNSELLDFDFC 440 + I ++ + VG SV F L+ + + + F + Sbjct: 375 NIIYAEDILHDAIKKSFEIISEKSPNLPDKEEVAKIVGVGSVLFNDLYNQRIKDVSFSWD 434 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500 KV E YVQY +ARC S+ R A++ FD P + + + + L+ Sbjct: 435 KVLNFDGETGP-YVQYTHARCSSVVRLAEN------FD--PAKPVDYSTISEPDAMNLLK 485 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 + +P+V+ +A EP +A + D+A F+ ++ R N V N K R+ Sbjct: 486 EINRFPKVVSDAAEKYEPSVVARFAVDVAQAFNKFYNSTRIN-----VPEENVK--NARV 538 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 L + ++ L+++G+ +P M Sbjct: 539 MLTYLTKKTLHDALDLLGINAPEAM 563 >gi|291396590|ref|XP_002714514.1| PREDICTED: arginyl-tRNA synthetase 2, mitochondrial [Oryctolagus cuniculus] Length = 625 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 137/608 (22%), Positives = 258/608 (42%), Gaps = 117/608 (19%) Query: 27 KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK 86 K + + + R + A LS ++ + + D A+ + ++K D V + G+ Sbjct: 74 KSISAVPVSRKEEVADFQLSLDSLLANNNHSSSDIQVQAKRLAEKLKCDTVVSEI-STGR 132 Query: 87 GFINLYLSPSYLRK-ILSSIVVSGIEYG-RNLIGKGT---KVNIEFVSANPTGPMHVGHC 141 G +N ++ L K +L ++ G +YG ++ + G K+ +EF S N HVGH Sbjct: 133 GTVNFKINRELLTKTVLQQVIEDGSKYGLKSELFSGVPQKKIVVEFSSPNIAKKFHVGHL 192 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGY 200 R ++G+ +A+L G++VTR Y+ D G Q L + Y++ L +N P + Sbjct: 193 RSTIIGNFIANLKEALGHQVTRINYLGDWGMQFGLLGTGFQLFGYEEKLQSN----PLQH 248 Query: 201 YPGVYLKHVGKELAD-----KYSSELLNFPE-------EKWLPIVKDYSVQAMMKIIRDD 248 +Y++ V KE AD K + E E W +D S++ ++I Sbjct: 249 LFEIYVQ-VNKEAADDKSVAKSAQEFFQRLELGDAQAFSLWQKF-RDLSIEEYIRI---- 302 Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308 K L++ D + S + F+R I ++D+ +G+L K T D+ Sbjct: 303 YKRLDVYFDEY-SGESFYREKSREILKLLDS--------KGLLKKT-VKGTAVVDL---- 348 Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV------------ 355 S +++SDG+ Y DLA + ++ FD MIYV Sbjct: 349 ----SGNSDPSSICTVMRSDGTSLYATRDLAAAIDRMDKYNFDTMIYVTDKGQKKHFQQV 404 Query: 356 ------MGSDHSGYVKRLE----AVAAAVSEKKAQINVL---LCEL-VRLYRDGMPIKMS 401 MG D +V+R + V + ++ + L L E+ +R+ ++ IK + Sbjct: 405 FQMLKIMGYD---WVERCQHVPFGVVQGMKTRRGDVTFLEDVLNEIQLRMLQNMASIKTT 461 Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYAR 460 K+ + + ++VG ++ + + L D+ F + QS+ + ++QY +AR Sbjct: 462 KKLEN---PQETAEKVGLAALIIQDF--RGALLSDYQFSWDRIFQSRGDTGVFLQYTHAR 516 Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ------LIVHLAEYPRVIENATI 514 S+ + F N +F+T+ LQ ++ HL + V+ ++ Sbjct: 517 LHSL---------EETFGCGYLN------DFNTACLQEPQSVSILQHLLRFDEVLYRSSQ 561 Query: 515 AQEPYKLAFYLYD---LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571 +P + YL LA+V H H +++P ++ RL L AV S++ Sbjct: 562 DLQPRHIVSYLLTLSHLAAVAHKTL-HIKDSP---------PEVAGARLHLFKAVRSVLA 611 Query: 572 SGLNIIGV 579 +G+ ++G+ Sbjct: 612 NGMKLLGI 619 >gi|242020388|ref|XP_002430637.1| predicted protein [Pediculus humanus corporis] gi|212515809|gb|EEB17899.1| predicted protein [Pediculus humanus corporis] Length = 569 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 103/501 (20%), Positives = 194/501 (38%), Gaps = 84/501 (16%) Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KV +E+ S N P HVGH R ++G+++A++ G V + Y+ D G Q + L Sbjct: 118 GKKVIVEYSSPNIAKPFHVGHLRSTIIGNSIANIKKKLGNNVFKLNYLGDWGTQFGIIQL 177 Query: 180 SVFWRYQQALYNNDSDLP-----EGYYPGVYLKHVGKELADKYSSE--LLNFPEEKWLPI 232 V ++ ++ P + Y G L + ++ +K LL +EK + + Sbjct: 178 GV--EHENYTIDDIKKDPINLLFKAYVKGNQLSKLDQDAYEKAKKNFYLLERQDEKLIQL 235 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 Y + + ++ K L ++ D F E D+ R + +++ +GIL Sbjct: 236 WDKYRMWTLEEL-NATYKRLGVEFDSFSWESDYRRSHADNVLKLLEE--------KGILS 286 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL-AYFKCKYERGFDN 351 + + + V DD PL+KSD + Y DL A FD Sbjct: 287 TDEFQ--------------KKVAVIDDKVIPLIKSDNTTLYICRDLMAVLDRISTHNFDE 332 Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 M YV+ + + + L + + K +I +R + G M R G+ I L+ Sbjct: 333 MYYVVDNGQAEHFTNLFKLCEKLEISKNKI-------LRQIKFGKINGMKTRKGNVIFLK 385 Query: 412 HVVDEV---------GSDSVRFMMLWRKNSELL--------DFDFCKVKE---------Q 445 V+DE + + + R+ +++L D + K+ Q Sbjct: 386 DVIDEARERVLAKQQSTKTTKTSADDRETADVLGVSAVIINDLKRSRTKDYAAKWEDMLQ 445 Query: 446 SKENPVFYVQYAYAR-CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 + ++QY + R C K + D PQ + + + LI +A Sbjct: 446 MTSDTGVFLQYCHCRLCNLSLECGKTMASYCD---------PQALK-EIEAINLIKQIAN 495 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 Y ++ + +P +L YL+ L +G + V++++ RL L Sbjct: 496 YESILIKSNETLQPKELVSYLFALCRATNGALKNLN-------VKSSDDHTGSQRLLLFE 548 Query: 565 AVASIINSGLNIIGVESPNEM 585 S++ G+ ++G++ +M Sbjct: 549 KTRSVLEDGMKLLGLKPLRKM 569 >gi|305665103|ref|YP_003861390.1| arginyl-tRNA synthetase [Maribacter sp. HTCC2170] gi|88709855|gb|EAR02087.1| arginyl-tRNA synthetase [Maribacter sp. HTCC2170] Length = 595 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 120/560 (21%), Positives = 225/560 (40%), Gaps = 91/560 (16%) Query: 80 SVFIAGKGFINLYLSPSYLRKILSSIV-VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138 S F KGF+N+ +S S+ + SI + Y N GK V +E+ S N P+H+ Sbjct: 73 SGFNVVKGFLNIVISDSHYIEFFKSIKKIKNFGYRAN-AGK-EAVMVEYSSPNTNKPLHL 130 Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRYQQALYNN-DSD 195 GH R ++G ++A ++ +G +V + IND G I + LA F + + D Sbjct: 131 GHIRNNLLGYSVAEILKAAGKKVYKTQIINDRGIHICKSMLAWQKFGKGETPQNTGLKGD 190 Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV------------KDYSVQAMMK 243 G Y + K E+ + S + EK PI+ D V + K Sbjct: 191 KLVGNYYVAFDKAYKAEIEEMVSKGVEKKQAEKEAPILLEAQSMLRKWEASDDEVVGLWK 250 Query: 244 IIR--------DDLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294 + + K L + D ++ D + G +D++ + +G Y+ Sbjct: 251 TMNGWVYKGFDETYKNLGVDFDKLYYESDTYLLG-----KDVVASGLEKGVFYK------ 299 Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL--AYFKCKYERGFDNM 352 K + D+ + L ++ +L+SDG+ Y D+ A + K M Sbjct: 300 KEDGSVWIDLTDEGL----------DEKIVLRSDGTAVYMTQDIGTAIQRVKDYSDITGM 349 Query: 353 IYVMGSDHSGYVKRL----EAVAAAVSEKKAQINVLLCEL----------VRLYRDGMPI 398 +Y +G++ + K L + + +E+ ++ + +L + D + I Sbjct: 350 VYTVGNEQDYHFKVLFLILKKLGFTWAERLHHLSYGMVDLPSGKMKSREGTVVDADDLMI 409 Query: 399 KMSKRAGDFITLRHVVDE------------VGSDSVRFMMLWRKNSELLDFDFCK-VKEQ 445 MS+ A +D+ +G ++++ +L + + FD + V Q Sbjct: 410 DMSETAAKISEELGKLDDYSVTEKQGLFKMIGLGALKYYILKVDPKKRILFDPEESVDFQ 469 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 P ++QY YAR +SI R+ +I D ++ P E + E +L+ + + Sbjct: 470 GNTGP--FIQYTYARIQSILRKGDEIANVWDSEVEPA------MELHSKEKELLKQVQAF 521 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 P I+ A P +A Y YDL F+ + ++ + + + + R+QL Sbjct: 522 PETIQLAAENYSPALIANYTYDLVKEFNSFYQ------QVSILGESVEQKKVFRVQLSKK 575 Query: 566 VASIINSGLNIIGVESPNEM 585 V +I S ++G++ P M Sbjct: 576 VGEVIQSAFLLLGIQVPERM 595 >gi|290988574|ref|XP_002676976.1| predicted protein [Naegleria gruberi] gi|284090581|gb|EFC44232.1| predicted protein [Naegleria gruberi] Length = 536 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 128/581 (22%), Positives = 231/581 (39%), Gaps = 110/581 (18%) Query: 64 IAELIVARIKIDPDVDSVFIAGKG-FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +A+ I +K DV G+G ++N + P++L K + + R K Sbjct: 7 LAKEISRIVKEKTDVVVENCVGEGPYVNFFYQPAHLGKAIEEVHNGNFLSVRE--SKNEN 64 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V IE+ N HVGH R A +G++L L + GY V YI D + ++ F Sbjct: 65 VMIEYSQPNTHKTFHVGHMRNAALGNSLVLLYEWCGYNVHAVNYIGDVVDKQGVISQG-F 123 Query: 183 WRYQQALYNNDSDLPEGYYP-----GVYLKHVGKELADKYSSELLNFPEE---------K 228 Q L ++++ +P G+ L +G++ AD +N +E Sbjct: 124 ILSQAELGSSENKEKIHIFPADSPVGIELTELGRK-ADCNVDASINIGQEFKKRESQCKT 182 Query: 229 WLPIVKDY--SVQAMMKIIR----DDLKAL----NIQHDIFISEDDFHRGDPSPIRDIID 278 L ++D+ ++ + +I R +D K++ + + D F E D GD S ++I+ Sbjct: 183 LLRAMEDHKKNISMLWEITRTWSIEDFKSIYKWSDCRFDHFFHESDV--GDES--KEIVL 238 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR----PLLKSDGSYTYF 334 +G +L+ +G D+ + LL S G+ Y Sbjct: 239 KAYEEG-----------------------KLIKSDGAIGADLGKLGFCVLLTSAGTGLYA 275 Query: 335 AADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393 DLA K K+E D +YV+ S + +++ + ++A+ L + + Sbjct: 276 TKDLALAKRKFEEFKVDRSVYVVDVSQSLHFQQVFKTLEVLGFEQAKKCKHLAYGMVVLP 335 Query: 394 DGMPIKMSKRAGDFI----------------------------TLRHVVDEVGSDSVRFM 425 DG KMS R G+ I + ++ ++++ Sbjct: 336 DG---KMSSRKGNIIYFSTLQKSLTQNITDNFMSKYEGEWPKEEIEETTRKIAISAIKYG 392 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNV 484 ML + N++ + F + +S N Y+ YAYAR S+ + D +D+ L Sbjct: 393 MLNQDNNKDITFVLKEWASKSG-NTGPYLMYAYARAVSVVNKIGLDSSVTIDYSLLT--- 448 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 D +E +L+ + +Y V+E A +P L +LY+L +S E Sbjct: 449 -------DETERKLLSTILQYSIVVERAAEQYKPQLLCIFLYNLCK----QYSKMYEAVS 497 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +R A +L RL+LV A ++ GL ++G+ + M Sbjct: 498 IR--DAATPELKQTRLRLVAGFAKVLKHGLGLLGISTAERM 536 >gi|114570763|ref|YP_757443.1| arginyl-tRNA synthetase [Maricaulis maris MCS10] gi|122315492|sp|Q0AMI8|SYR_MARMM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|114341225|gb|ABI66505.1| arginyl-tRNA synthetase [Maricaulis maris MCS10] Length = 588 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 128/542 (23%), Positives = 216/542 (39%), Gaps = 90/542 (16%) Query: 48 NAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVV 107 N AM ++ +P +A ++ + P + + IAG GFINL + +L ++ + Sbjct: 43 NGAMPAAKQAKTNPRELAAKLIEALHGIPQIGAAEIAGPGFINLRPA-EHLYGERAAEIA 101 Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167 G L V I+F N PMHVGH R +V+GD+L L F G V + ++ Sbjct: 102 GDDRAGAPLAAAPRTVMIDFGGPNVAKPMHVGHLRSSVLGDSLQRLFRFRGDTVVSDIHL 161 Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDLPEGY--------------YPGVYLK-HVGKE 212 D G Q+ L ++ Q L D+ + +GY YP +K G E Sbjct: 162 GDWGLQMGHL-ITELHEEQPDLVYFDAAITDGYPSEPPVTIEDLARLYPQASVKAKAGPE 220 Query: 213 LAD--KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 + + ++ L + +++ + + + ++ D AL + D++ E D DP Sbjct: 221 RLEISRSATAELQAGRPGYRALLRHF-IDVSVAALKRDFGALGVHFDLWKGESDV---DP 276 Query: 271 SPIRDIIDNLARQGYV--YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 I ++++ +G EG L ++ D D+K+L + ++ L+ Sbjct: 277 L-IPGLVEDFKARGVAEESEGALIVRVAR-----DGDKKEL---APLI-------LVSKT 320 Query: 329 GSYTYFAADLAY-FKCKYERGFDNMIYVMG---SDHSGYVKRLEAVAAAVSE------KK 378 G+ Y DLA K D +YV+ DH V R A E K Sbjct: 321 GAALYGTTDLATILDRKQSVDPDLTLYVVDLAQGDHFEQVFRAAEKAGLAEEGALEHVKF 380 Query: 379 AQINVLLCELVRLYRDGMPIKMS--------------KRAG---DFITLRH--VVDEVGS 419 +N + +R RDG +++ K AG D H V VG Sbjct: 381 GTVNGTDGKRLR-TRDGGTFRLADLIASAIERADERLKEAGLAADVSAEEHARVARMVGL 439 Query: 420 DSVRFMML--WRKNSELLDFD-FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 +++F L +R + + D D F + K P Y+ YA R +S+ R+A + Sbjct: 440 AAIKFADLQNYRTTNYVFDLDRFTSF--EGKTGP--YLLYAAVRVKSLMRRAAEA----- 490 Query: 477 FDLFPRNVIPQESEFDTSELQ-LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 V P E D E + L++ L + ++NA + P L + + LA F Sbjct: 491 ------GVTPGEILVDAQEERDLVLCLDAFGAALDNAADNRAPNALCDHAFTLAQAFSKF 544 Query: 536 WS 537 +S Sbjct: 545 YS 546 >gi|58269318|ref|XP_571815.1| arginine-tRNA ligase [Cryptococcus neoformans var. neoformans JEC21] gi|134114239|ref|XP_774367.1| hypothetical protein CNBG3480 [Cryptococcus neoformans var. neoformans B-3501A] gi|50257002|gb|EAL19720.1| hypothetical protein CNBG3480 [Cryptococcus neoformans var. neoformans B-3501A] gi|57228051|gb|AAW44508.1| arginine-tRNA ligase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 622 Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 108/484 (22%), Positives = 191/484 (39%), Gaps = 102/484 (21%) Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169 + YG G G + ++F S N P H GH R ++G + +L +G++VTR Y+ D Sbjct: 142 LAYGTTTEGAGKHLVVDFSSPNIAKPFHAGHLRSTIIGAVICNLHEANGWKVTRLNYLGD 201 Query: 170 AGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLK------------HVGKELA 214 G Q L++ Y N+ +L P + VY+K G+ + Sbjct: 202 WGTQYGLLSVGF------DKYGNEEELVKDPIHHLFQVYVKINNARDEQKKKFEAGETIP 255 Query: 215 DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR-DDL---------KALNIQHDIFISEDD 264 D+ + LL +K ++D +A+ + R DL K LN+ D++ E Sbjct: 256 DEENIHLL---AKKVFKDMEDGEPKAIAQWARFRDLSIEKLKGTYKKLNVHFDVYWGESQ 312 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 +++ R + + + C+ DR LL T +D+ + Sbjct: 313 VSE----------ESMERAVRIVQ--------EKNLTCE-DRGALLVDLTKF--KMDKAI 351 Query: 325 L-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS---------------GYVKRL 367 + K DG+ Y DL KY++ FD IYV+ + + Y +L Sbjct: 352 VRKGDGTSIYLTRDLGGAYDKYQKYKFDKHIYVVQAAQTLHFNQLFKTLELMGEPYADKL 411 Query: 368 EAVA----AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSD 420 E V +S +K + V L +++ D M +M + + +G+ Sbjct: 412 EHVTFGLVKGMSTRKGTV-VFLEDIIAEATDVMHEQMKSNEAKYAQVEDPEGTSAIIGTT 470 Query: 421 SVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 +V+ + + DFD + + P ++QY++ R S+ R+ Sbjct: 471 AVKIQDMAGRRINDYDFDIKRCTSFEGDFGP--FIQYSHVRLCSVQRKN----------- 517 Query: 480 FPRNVIPQE-SEFDTSELQ------LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 P ++PQ +E D S L +I+HLA YP + NA + EP +L + + L + Sbjct: 518 -PNVLVPQSINEIDLSILNEPKVNDIIMHLALYPTHVRNAFLQSEPSQLVTWCFKLGHLV 576 Query: 533 HGHW 536 W Sbjct: 577 GAAW 580 >gi|194216244|ref|XP_001500381.2| PREDICTED: similar to Probable arginyl-tRNA synthetase, mitochondrial precursor (Arginine--tRNA ligase) (ArgRS) (Arginyl-tRNA synthetase-like) [Equus caballus] Length = 578 Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 130/576 (22%), Positives = 235/576 (40%), Gaps = 110/576 (19%) Query: 54 SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEY 112 SRP D A + ++K D V + G+G +N ++ L K +L ++ G +Y Sbjct: 57 SRP---DMQVQATRLAEKLKCDTVVSEI-STGQGTVNFKINRELLTKTVLQQVIEDGPKY 112 Query: 113 G------RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166 G +L K K+ +EF S N HVGH R ++G+ +A+L G++VTR Y Sbjct: 113 GLKSELFSDLPQK--KIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVTRINY 170 Query: 167 INDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS------ 219 + D G Q L + Y++ L +N P + VY++ V KE AD S Sbjct: 171 LGDWGMQFGLLGTGFQLFGYEEKLQSN----PLQHLFEVYVQ-VNKEAADDKSVAKSARE 225 Query: 220 --ELLNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274 + L + + L + +D S++ ++I K L + D + S + F+R + Sbjct: 226 FFQRLELGDMQALALWQKFRDLSIEEYVRIY----KRLGVHFDEY-SGESFYREKSQEVL 280 Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTY 333 ++D+ +G + + I K T D+ GD +++SDG+ Y Sbjct: 281 KLLDS---KGLLQKTI------KGTAVVDLSGN---------GDPSSICTVMRSDGTSLY 322 Query: 334 FAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 DLA + ++ FD MIYV + +++ + + A+ C+ V Sbjct: 323 ATRDLAAAIDRMDKYHFDRMIYVTDKGQKKHFQQVFQLLQIMGYDWAE----RCQHVPF- 377 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL-----------------L 435 G+ M R GD L V++E+ ++ M + EL Sbjct: 378 --GVVQGMKTRRGDVTFLEDVLNEIQLRMLQNMASIKTTKELENPQETAERVGLAALIIQ 435 Query: 436 DFDFCKVKE---------QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 DF + + QS+ + ++QY +AR S+ + F N Sbjct: 436 DFKGLLLSDYQFSWDRVFQSRGDTGVFLQYTHARLHSL---------EETFGCGYLNDCN 486 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD---LASVFHGHWSHGRENP 543 + + ++ HL + V+ ++ +P + YL LA+V H H +++P Sbjct: 487 TACLQEPQSVSILQHLLRFDEVLYRSSQDLQPRHIVSYLLTLSHLAAVAHKTL-HVKDSP 545 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 ++ RL L AV S++ +G+ ++G+ Sbjct: 546 ---------PEVAGARLHLFRAVRSVLANGMKLLGI 572 >gi|239980243|ref|ZP_04702767.1| arginyl-tRNA synthetase [Streptomyces albus J1074] gi|291452098|ref|ZP_06591488.1| arginyl-tRNA synthetase [Streptomyces albus J1074] gi|291355047|gb|EFE81949.1| arginyl-tRNA synthetase [Streptomyces albus J1074] Length = 599 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 42/132 (31%), Positives = 68/132 (51%), Gaps = 2/132 (1%) Query: 47 TNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIV 106 N + L++ L +P +A +V I D + + ++G GF+NL LS + + + L++ Sbjct: 43 ANGILALAKKLKGNPRELATKVVDAIGADEVIQDIEVSGPGFLNLTLSDAAITRNLAARA 102 Query: 107 VSGIEYGRNLI-GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREY 165 G L GT V I++ N MHVGH R AV+GD + ++ F+G +V R + Sbjct: 103 ADPARLGVPLAEAPGTTV-IDYAQPNVAKEMHVGHLRSAVIGDAVVRMLEFTGEQVVRRH 161 Query: 166 YINDAGAQINTL 177 +I D G Q L Sbjct: 162 HIGDWGTQFGML 173 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 73/297 (24%), Positives = 126/297 (42%), Gaps = 53/297 (17%) Query: 323 PLL--KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 PL+ KSDG + Y A DL+ + + ++ D ++YV+ + S + K + A Sbjct: 322 PLIVQKSDGGFGYAATDLSAIRDRVFQLKADTLLYVVDARQSLHFKMVFETARRAGWLGE 381 Query: 380 QIN-VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 + V L L +DG P K R G+ + L ++DE Sbjct: 382 DVKAVQLAFGTVLGKDGKPFKT--REGETVRLVDLLDEAVERATAVVREKDVKEQLTEEQ 439 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 VG +V++ L + FD ++ + + V Y+QYAYAR RSI R+A Sbjct: 440 IAERGAEVGIGAVKYADLSTSAARDYKFDLDQMVSLNGDTSV-YLQYAYARIRSILRRAG 498 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 + P V E +E L +HL ++ + +A P+KLA YLY A Sbjct: 499 EARP----------VAHPELALAPAERALGLHLDQFGEIASDAAAEYAPHKLAAYLYQTA 548 Query: 530 SVFHGHWSHGRENPRLRFVQANN-RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 S++ + + + A+N +L RL L ++ G+ ++G+ +P ++ Sbjct: 549 SLYTTFYD------QCHVLSADNPPELVENRLFLCDLTGRTLHQGMELLGIRTPEQL 599 >gi|159116602|ref|XP_001708522.1| Arginyl-tRNA synthetase [Giardia lamblia ATCC 50803] gi|157436634|gb|EDO80848.1| Arginyl-tRNA synthetase [Giardia lamblia ATCC 50803] Length = 621 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 116/505 (22%), Positives = 206/505 (40%), Gaps = 72/505 (14%) Query: 78 VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT----KVNIEFVSANPT 133 +++V IAG FIN+ L+P+YL I ++ + +G L T +V ++F S N Sbjct: 105 IEAVNIAG-CFINIALTPAYLLSKCFDIYMA-VPFG-TLPKPPTLPRKRVVVDFSSPNVA 161 Query: 134 GPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND 193 MHVGH R ++GD++ L + GY+V R ++ D G Q L + Sbjct: 162 KSMHVGHLRSTIIGDSICRLYEYVGYDVHRINHVGDWGTQFGMLITHL------------ 209 Query: 194 SDL-PEGYYPGVYLKHVG----KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248 +D+ PE + + + L Y + F + P + + +A++K+ R + Sbjct: 210 TDMHPEIADAAAHCRRITMLPIDNLVAFYKAAKERFDND---PAFQKRAYEAVVKLQRLN 266 Query: 249 LKALNIQHDIF-ISEDDFHR-GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 L + I IS +F R D I+ ID Y ++ + K M Sbjct: 267 LAEFYLWCKICDISRHEFQRIYDRLDIK--IDEFGESSYKFKLGTTVARLKRLHLTQMSD 324 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA--YFKCKYERGFDNMIYVMGSDHSGYV 364 K + + G D ++KSDG +TY D+A Y + + D +YV+ + S + Sbjct: 325 KATVI--PIEGMDYPLIIVKSDGGFTYDTTDMAAIYHRTQVLHA-DKCVYVVDAGQSSHF 381 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 + A V + V L DG +K RAG+ + L ++DE ++S+R Sbjct: 382 DLVFKAAEKAGWITKDQAVHVPFGVVLGSDGKRLK--TRAGETVKLEDLLDEAVTESMRL 439 Query: 425 MMLWRKNSELLDFDFCKVKEQS----------------------------KENPVFYVQY 456 + ++ E + +V E K N Y+ Y Sbjct: 440 LEERNRDQEFSQEEMRQVAEAVGYGAVKYADLSSHRIKDYKYDPKRMLNLKGNTAAYLLY 499 Query: 457 AYARCRSIFRQAKDIFPDLDF-DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515 ++ R SI R+A +D +L+ + + S + SE+ L+V L + I Sbjct: 500 SFTRISSICRKA-----GIDREELYTSDTLRNLSITEPSEINLLVALLKVRDTILFTLED 554 Query: 516 QEPYKLAFYLYDLASVFHGHWSHGR 540 P+++ ++Y +AS + + R Sbjct: 555 LCPHRICDWVYSVASAYTDFYEKCR 579 >gi|54290192|dbj|BAD61080.1| putative arginyl-tRNA synthetase [Oryza sativa Japonica Group] Length = 631 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 6/143 (4%) Query: 48 NAAMILSRPLG-----LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 NA + SR G +P+ + + I + ++S+ +AG G+IN+ LS +++ + + Sbjct: 16 NAMSVFSRIRGSATNFRNPMAVGQAIANNLPQSNIIESISVAGPGYINITLSSNWIAQRI 75 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 ++V GI+ ++ V ++F S N MHVGH R ++GDTLA + F+ EV Sbjct: 76 QDMLVCGIKTWAPILPVKRAV-LDFSSPNIAKEMHVGHIRSTIIGDTLAHMFEFTNVEVL 134 Query: 163 REYYINDAGAQINTLALSVFWRY 185 R ++ D G Q L +F ++ Sbjct: 135 RRNHVGDWGTQFGMLIEFLFEQF 157 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 12/142 (8%) Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS-KENPVFYVQYAYARCRSIFRQA 468 L + +G +V++ L KN+ L D+ F + S K N Y+QYA+AR SI R+A Sbjct: 394 LDRTSEAIGYGAVKYSDL--KNNRLTDYTFSFDQMLSDKGNTAVYLQYAHARICSIIRKA 451 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 L I + E L +HL ++ V+E A +P++L YLY L Sbjct: 452 SKDVEKLKMT----GAITLGHPY---ERFLGLHLIQFTEVVEQACADLQPHRLCDYLYSL 504 Query: 529 ASVFHGHWSHGR--ENPRLRFV 548 + F +++ + ENP+L F+ Sbjct: 505 SLTFSKFYTNCQVLENPKLGFL 526 >gi|221061383|ref|XP_002262261.1| arginyl-trna synthetase [Plasmodium knowlesi strain H] gi|193811411|emb|CAQ42139.1| arginyl-trna synthetase, putative [Plasmodium knowlesi strain H] Length = 588 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 140/611 (22%), Positives = 249/611 (40%), Gaps = 135/611 (22%) Query: 43 GHLSTNAAMILSRPLGLD-----PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 GH N A + + G + +++LI+ I + + + + +GFI + LS Y Sbjct: 37 GHFQCNNAFNIFKKYGKELNVENAQKLSQLIIENIS-ENFFEEIKSSPQGFITVKLSKQY 95 Query: 98 LRKIL----------SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 + K L S+ + ++ G + G +V ++F S N MHVGH R ++G Sbjct: 96 IEKSLLKLYKNNKIEISVNIDEVKSGND--GDYKRVLVDFSSPNIAKEMHVGHLRSTILG 153 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN--NDSDLPEGYYPGVY 205 D++ ++ F + R +I D G Q + + Y N ++L Y Sbjct: 154 DSICNIFEFLNVQTIRVNHIGDWGTQFGMIINYIVTNYPNFKENMPELTNLTSLYQEAKK 213 Query: 206 LKHVGKEL---ADKYSSELLNFPEEK---WLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259 + V KE + Y+ +L N E+ W I + S + KI K L+I+ D + Sbjct: 214 IYDVDKEFEKNSKNYAIKLQNNDEDSLFIWKKICES-SKKEFNKI----YKILDIKLD-Y 267 Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319 + E + PS ++ + D ++LL T VGD Sbjct: 268 VGESHYINMIPSTLKILKD----------------------------QELL---TNVGDA 296 Query: 320 V-------DRPLL--KSDGSYTYFAADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRLE 368 + PL KS+G Y Y + D+A +++ K E D +IYV + + + + Sbjct: 297 ICYHSENFKVPLFLQKSNGGYGYDSTDVAALHYRLK-ELNADCVIYVTDNGQLSHFETIF 355 Query: 369 AV---AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425 V A +EK I+V L + K R+G I L ++++E G++ + Sbjct: 356 EVARRAQWANEKTKLIHVGF----GLVLNADNKKFKTRSGTTIKLINLINE-GTERAKKD 410 Query: 426 MLWR---KNSELLDF----DFCKVKEQ----------------------------SKENP 450 +L R K+ E + + D K+ E+ K N Sbjct: 411 LLERIQLKSEEEISYFEGVDIDKLSEELCVSAIKYFDIKQNRNTDYKFSYDNMLNVKGNT 470 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 Y+ YAY+R SIFR+ ++D D ++ + S + E+ L +H+ ++P V Sbjct: 471 GLYIIYAYSRMCSIFRKC-----NIDMDQLSKDELNLVSPY---EVNLGLHILKFPDVFY 522 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +KLA Y YDL ++F + EN ++ + + N K RL L S++ Sbjct: 523 FILKNMLIHKLAEYTYDLTTIFTAFY----ENCKV--INSENEK---SRLILCAISKSLL 573 Query: 571 NSGLNIIGVES 581 L ++G+++ Sbjct: 574 QICLKLLGLKA 584 >gi|307331363|ref|ZP_07610483.1| arginyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113] gi|306882986|gb|EFN14052.1| arginyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113] Length = 595 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 75/296 (25%), Positives = 128/296 (43%), Gaps = 50/296 (16%) Query: 323 PLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 PL+ KSDG + Y A DL+ + + + D ++YV+ + S + K + A + Sbjct: 317 PLIVQKSDGGFGYAATDLSAIRDRVQHLKADTLLYVVDARQSLHFKMVFETARRIGWLND 376 Query: 380 QIN-VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 Q++ V L L +DG P K RAG+ + L ++DE Sbjct: 377 QVHAVQLAFGTVLGKDGKPFKT--RAGETVRLEDLLDEATERAAAVVREKSEKLGLTEED 434 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 +G +V++ L S FD ++ + + V Y+QYAYAR +SI R+A+ Sbjct: 435 ILERGAQLGVGAVKYADLSTSASRDYKFDLDQMVSLNGDTSV-YLQYAYARIQSILRRAE 493 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 + R V E +E L +HL ++ + EP+KLA YLY LA Sbjct: 494 E---------GQRTVAHPELPLTKAERALGLHLDQFGETLGEVAAGFEPHKLAGYLYQLA 544 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 S++ + + P L+ ++ RL L A + G+ ++G+ +P + Sbjct: 545 SLYTTFYD---QCPVLKAEGGPSQ--VENRLFLCDITARTLRQGMTLLGIRTPERL 595 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 14/143 (9%) Query: 45 LSTNAAMILSRPLGLDPLTIAELIVARIKI-------DPDVDSVFIAGKGFINLYLSPSY 97 N + L++ L +P +A +V+ + + DP + + ++G GF+N+ ++ S Sbjct: 41 FQANGMLALAKKLQGNPRELAAKVVSHLPVAATSADPDPVIADIEVSGPGFLNITIADSA 100 Query: 98 LRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154 + L++ G+ + + GT V I++ N MHVGH R AV+GD + ++ Sbjct: 101 ITATLAARAADDRLGVPFAQ---APGTTV-IDYAQPNVAKEMHVGHLRSAVIGDAVVRIL 156 Query: 155 AFSGYEVTREYYINDAGAQINTL 177 F+G +V R ++I D G Q L Sbjct: 157 EFAGEKVVRRHHIGDWGTQFGML 179 >gi|332297543|ref|YP_004439465.1| Arginyl-tRNA synthetase [Treponema brennaborense DSM 12168] gi|332180646|gb|AEE16334.1| Arginyl-tRNA synthetase [Treponema brennaborense DSM 12168] Length = 598 Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 128/580 (22%), Positives = 232/580 (40%), Gaps = 111/580 (19%) Query: 59 LDPLTIAELIVARIKIDPD--VDSVFIAGKGFINLYLSPSY-LRKILSSIVVSGIEYGR- 114 + P IA+ A P V F A ++N+ L+ S + IL + YG Sbjct: 61 MAPPIIAQKTAAYACAHPSAAVTGCFTAAGPYVNVKLNKSAAVSAILGRVAAQNASYGSC 120 Query: 115 NLIGKGT----KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170 N G +V +EF S N P+H+GH R +G++++ ++ +G EV + IN+ Sbjct: 121 NTDGVAPLADRRVMVEFSSPNTNKPLHLGHLRNDALGESVSRILKAAGAEVYKVNIINNR 180 Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPE--GYYPGVYLKHVGKELADKYSSELLNFPEEK 228 G I L+ + ++ +A D PE G ++ E DKYS + Sbjct: 181 GVHICKSMLA-YKKFHEAA----GDTPEKLGVKSDRFVGDCYVEF-DKYSKTDAAAESQA 234 Query: 229 WLPIVK----DYSVQAMMKIIRD--------DLKALNIQHD-IFISEDDFHRGDPSPIRD 275 +VK D SV+A+ K + D K + D ++ D + +G ++ Sbjct: 235 QELLVKWEQGDESVRALWKRMNDWAIRGITQTYKRTGVSFDKLYYESDTYLKGKEEILKG 294 Query: 276 IIDNL---ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + D + G V+ + + +D+K LL+ DG+ Sbjct: 295 LADGIFYREEDGSVWVDL---------AEIGLDKKV---------------LLRKDGTAL 330 Query: 333 YFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCELVR 390 Y D+ ++ + F+ ++YV+GS+ + K L V + E +++ L +V Sbjct: 331 YMTQDIGTAIYRHGDWAFNQLVYVVGSEQQYHFKVLFYVLKKLGYEWASRLYHLSYGMVN 390 Query: 391 LYRDGMPIKMSKRAGDFI-------TLR--------------------HVVDEVGSDSVR 423 L KM R G + TLR V +++ ++ Sbjct: 391 LPEG----KMKSREGTVVDADDLINTLRDGALEEIAAKGREEAVGDPAAVAEKIALGALH 446 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVF------YVQYAYARCRSIFRQAKDIFPDLDF 477 + +L ++ + F+ KE+ F Y+QY AR SI R+A D Sbjct: 447 YYLLQTTPTKDMLFN-------PKESLAFNGNTGPYLQYMGARICSILRKAADTGLQAAS 499 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 ++ E+E+ +L+ L +YP V+ A +P +L +LYD+A F G + Sbjct: 500 PAQAAALLTHETEW-----ELVKLLGDYPSVVVKAAENLDPSQLTGFLYDVAKAF-GKFY 553 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 H E P + + + N L RL L+ +++ + + ++ Sbjct: 554 H--ECPAVG-IASENPALASARLALIAGTRTVLENAMQLV 590 >gi|269860527|ref|XP_002649984.1| arginyl-tRNA synthetase [Enterocytozoon bieneusi H348] gi|220066603|gb|EED44079.1| arginyl-tRNA synthetase [Enterocytozoon bieneusi H348] Length = 559 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 111/528 (21%), Positives = 213/528 (40%), Gaps = 93/528 (17%) Query: 95 PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154 Y+++IL++++ ++G +GKG K+ +++ S N HVGH R ++G+ + L+ Sbjct: 88 KKYVKEILTTVLTKDEKFGSVDVGKGEKIVLDYSSPNIAKIFHVGHFRTTILGNFIKHLL 147 Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL---KHVGK 211 F+G+E Y+ D G Q L L + ++ D L ++ V + K + Sbjct: 148 KFNGFEPVSINYLGDWGKQFG-LVLLGYEKFGDKKKLQDDALMHLFHVYVEINKHKEFHQ 206 Query: 212 ELADKYSS-ELLNFPE--EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 E D + + E + PE ++W + +D S++ + K LN++ D++ E +++ Sbjct: 207 EARDIFKAMEEGSNPEYLKQW-QLFRDISIEKYKTL----YKKLNVEFDVYSGESLYNQK 261 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KS 327 I T+ D D S + D + L+ K+ Sbjct: 262 GKKIIEKC---------------------TSIVTDED------GSKYINTDYGKALVQKN 294 Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAV----SEKKAQIN 382 DG+ Y D+A + E +IY++ S+ + ++L +A + EK +N Sbjct: 295 DGTTLYITRDIAAIIDRMETYNPKQIIYIVSSEQDQHFQQLFYIAEHILKYPKEKFLHVN 354 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS------DSVRFMMLWRKNSELLD 436 G+ MS R G + V+D S D ++ K + +L Sbjct: 355 Y-----------GLVKGMSTREGTVHFIDDVIDLATSVFREFVDEKENVLDKEKTALILA 403 Query: 437 FDFCKVKEQSKENPVFY-------------------VQYAYARCRSIFRQAKDIFPDLDF 477 F V + + + Y +QY + R I Q +I D + Sbjct: 404 ISFLIVNDFTAKRIKGYTFDIKKKATTQKGQALGPTLQYTHCRLCGIEEQNAEIVID-NI 462 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 D N++ D + L+ L + +V E + EP ++ FYL DL +V + + Sbjct: 463 DKLNFNLVSN----DDTVANLMYKLLWFEQVNEQTLLDYEPSRVVFYLQDLCNVINSIIN 518 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R V+ + ++ +RL + A ++ +GL I+G+ +M Sbjct: 519 ILR-------VKDTDTEIAQIRLAVFKAAKIVLRNGLKILGLTVLEKM 559 >gi|221504188|gb|EEE29863.1| arginyl-tRNA synthetase, putative [Toxoplasma gondii VEG] Length = 607 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 118/551 (21%), Positives = 207/551 (37%), Gaps = 137/551 (24%) Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GF+ + +S ++L K L I+ K +V ++F S N MHVGH R ++ Sbjct: 97 GFVTVDISGAWLCKDLKEILKQKGHLQVPQAEKKLRVMVDFSSPNVAKEMHVGHLRSTII 156 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQ 187 G+++ ++AF G+EV R +I D G Q L L+ F++ + Sbjct: 157 GESICRILAFHGHEVQRINHIGDWGTQFGMLIEYLHSQFPDYKANMPDISDLNAFYKKAK 216 Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247 A ++ D D V G E A E W I + R Sbjct: 217 AAFDADEDFKTRSREMVVKLQGGDEAA-----------LESWRLIC---------DVSRK 256 Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM--- 304 + + + + D+ + E RG+ Y +LP + T K + Sbjct: 257 EFEKVYKRLDVSLEE----RGES---------------YYNAVLPKVVQELTDKGMVTVS 297 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGY 363 D + +F +V +KSDG + Y + DLA + + ER D +IYV + Sbjct: 298 DGAKCVFTKV---SEVPLMAVKSDGGFGYDSTDLAAVRDRLVERRGDWLIYVTDLGQEEH 354 Query: 364 VKRLEAVAAAVS---EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416 ++ A A K +++ + +V+ +DG K R+G+ + L ++DE Sbjct: 355 FTKIFAAAEQAGWHLPPKTRLDHMGFGVVQ-GQDGKRFKT--RSGEVVKLVDLLDEAKAR 411 Query: 417 ---------------------------------------------VGSDSVRFMMLWRKN 431 +G +V++ L + Sbjct: 412 ALKELRRRKEEEKEEEKRESGDGCNASPCTGTTVADEEMDNAAEAIGYSAVKYFDLKQNR 471 Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491 F + ++ + K N Y+ YAYAR +IFR+A LD P+E + Sbjct: 472 HTDYKFSYDRMLD-PKGNTAVYMMYAYARICAIFRKADVDISTLD---------PEELKI 521 Query: 492 DT-SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR------ENPR 544 + +E +L V LA++P V+ ++LA Y+Y ++ F + + +N R Sbjct: 522 EEPAERKLAVTLAQFPDVLATILDDLHIHRLAEYMYKVSGAFTDFYQACKVLGSPQQNTR 581 Query: 545 LRFVQANNRKL 555 L +A + L Sbjct: 582 LLLCEATRKVL 592 >gi|308806864|ref|XP_003080743.1| Arginyl-tRNA synthetase (ISS) [Ostreococcus tauri] gi|116059204|emb|CAL54911.1| Arginyl-tRNA synthetase (ISS) [Ostreococcus tauri] Length = 628 Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 1/94 (1%) Query: 88 FINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 + N+ L+ P ++ S G +G KG +V IE S+NP P+H+G+ R ++ Sbjct: 67 YANMTLNRPMVFEAVMKSAAKQGATFGHTNAAKGKRVIIEHTSSNPNAPLHIGNLRNVMI 126 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 G LA LM G+EV +Y+ND GAQI AL+ Sbjct: 127 GAHLAKLMKACGHEVQEAFYVNDLGAQIGLTALA 160 >gi|262341218|ref|YP_003284073.1| arginine-tRNA ligase [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272555|gb|ACY40463.1| arginine-tRNA ligase [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 584 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 110/574 (19%), Positives = 237/574 (41%), Gaps = 136/574 (23%) Query: 82 FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 F +GF+N +Y +L ++ + Y L K ++ IE+ S N P+H+GH Sbjct: 77 FSVIEGFLNFIFKENYYIHLLKKMLNTNF-YHLKLPSK--RIMIEYSSPNTNKPLHLGHV 133 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG-Y 200 R +++G ++A ++ G+++ + IND G I+ + W+ DS +G + Sbjct: 134 RNSLIGSSIAKILKMVGHKIIKIQIINDRG--IHICKSMIAWKKFGKGETPDSIKMKGDH 191 Query: 201 YPGVYLKHVGKELADK-YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF 259 + G Y L DK Y E+ ++ +PI+ ++A R+ LK Sbjct: 192 FVGKYY-----SLFDKIYREEIRKTSKQDKIPIL----IEA-----RELLKK-------- 229 Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTM--VG 317 + GDP+ R I + + +VY G +T +K ++ ++ + S + +G Sbjct: 230 -----WECGDPTT-RSIWKKMNK--WVYNGF-----EETYRKLEISFDKIEYESNVYKIG 276 Query: 318 DDV----------------------------DRPLLKSDGSYTYFAADLAYFKCKYER-G 348 ++ + LL+SD + Y D+ ++ + Sbjct: 277 KEIIKKGLEKGIFFKKEDGSIWIDLIQEGFDQKLLLRSDQTSVYITQDIGTSVERFRKYN 336 Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI---KMSKRAG 405 D ++Y++G + + + L ++ + + + +L L + + + +M R G Sbjct: 337 IDQLVYIVGKEQDYHFQILFSILKRLG------YIWVNKLFHLSYEMVYLPSGRMKSREG 390 Query: 406 DFITLRHVVDEVGSDSVR-FMMLWRKNSE--------------LLDFDFCKVKEQSK--- 447 + I + E+ S + + F+ K+ E L + F K+ + K Sbjct: 391 NVIDADSFILEMYSIAKKNFLKKTSKSKEKVEQEKSYEILGLGALKYYFLKIDPRKKIIF 450 Query: 448 --ENPV-------FYVQYAYARCRSIFRQ-------AKDIFPDLDFDLFPRNVIPQESEF 491 E + Y+QY Y+R RS+ R+ D + ++ FD++ +N+I Sbjct: 451 YPEKSIDFKGKTGTYIQYTYSRIRSLERKFFEVCSLLNDYWSNIKFDMYEKNMIKI---- 506 Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551 L +YP +++ + P +A Y+Y+++ F+ + + L + +N Sbjct: 507 ----------LQKYPSILKKSATTFNPSLIANYIYEVSKTFNLLYEKKKLIDSLDLIHSN 556 Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + ++H +++ SG+N++G++ + M Sbjct: 557 ------ICMNIIHVTGNVLKSGMNLLGIKMLDRM 584 >gi|326562857|gb|EGE13145.1| arginyl-tRNA synthetase [Moraxella catarrhalis 103P14B1] gi|326567639|gb|EGE17747.1| arginyl-tRNA synthetase [Moraxella catarrhalis 12P80B1] Length = 412 Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 8/148 (5%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++ + G N M ++ LG++P A+ ++ + ID + + IAG GFIN++ Sbjct: 27 LVRQSNKIQFGDYQANGIMGAAKKLGINPREFAQTVLDHLSIDDIAEKLEIAGPGFINIF 86 Query: 93 LSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 L ++ K + +S G+ +N V +++ S N MHVGH R ++GD+ Sbjct: 87 LKNEWISKHANQANISRTLGVNAAQN-----DTVVVDYSSPNVAKEMHVGHLRSTIIGDS 141 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTL 177 + + F G V R ++ D G Q L Sbjct: 142 VVRTLEFLGNTVIRANHVGDWGTQFGML 169 >gi|237843883|ref|XP_002371239.1| arginyl-tRNA synthetase, putative [Toxoplasma gondii ME49] gi|211968903|gb|EEB04099.1| arginyl-tRNA synthetase, putative [Toxoplasma gondii ME49] gi|221483811|gb|EEE22123.1| arginyl-tRNA synthetase, putative [Toxoplasma gondii GT1] Length = 607 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 118/551 (21%), Positives = 207/551 (37%), Gaps = 137/551 (24%) Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GF+ + +S ++L K L I+ K +V ++F S N MHVGH R ++ Sbjct: 97 GFVTVDISGAWLCKDLKEILKQKGHLQVPHAEKKLRVMVDFSSPNVAKEMHVGHLRSTII 156 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLA-------------------LSVFWRYQQ 187 G+++ ++AF G+EV R +I D G Q L L+ F++ + Sbjct: 157 GESICRILAFHGHEVQRINHIGDWGTQFGMLIEYLHSQFPDYKANMPDISDLNAFYKKAK 216 Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247 A ++ D D V G E A E W I + R Sbjct: 217 AAFDADEDFKTRSREMVVKLQGGDEAA-----------LESWRLIC---------DVSRK 256 Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM--- 304 + + + + D+ + E RG+ Y +LP + T K + Sbjct: 257 EFEKVYKRLDVSLEE----RGES---------------YYNAVLPKVVQELTDKGMVTVS 297 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGY 363 D + +F +V +KSDG + Y + DLA + + ER D +IYV + Sbjct: 298 DGAKCVFTKV---SEVPLMAVKSDGGFGYDSTDLAAVRDRLVERRGDWLIYVTDLGQEEH 354 Query: 364 VKRLEAVAAAVS---EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---- 416 ++ A A K +++ + +V+ +DG K R+G+ + L ++DE Sbjct: 355 FTKIFAAAEQAGWHLPPKTRLDHMGFGVVQ-GQDGKRFKT--RSGEVVKLVDLLDEAKAR 411 Query: 417 ---------------------------------------------VGSDSVRFMMLWRKN 431 +G +V++ L + Sbjct: 412 ALKELRRRKEEEKEEEKRESGDGCNASPCTGTTVADEEMDNAAEAIGYSAVKYFDLKQNR 471 Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491 F + ++ + K N Y+ YAYAR +IFR+A LD P+E + Sbjct: 472 HTDYKFSYDRMLD-PKGNTAVYMMYAYARICAIFRKADVDISTLD---------PEELKI 521 Query: 492 DT-SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR------ENPR 544 + +E +L V LA++P V+ ++LA Y+Y ++ F + + +N R Sbjct: 522 EEPAERKLAVTLAQFPDVLATILDDLHIHRLAEYMYKVSGAFTDFYQACKVLGSPQQNTR 581 Query: 545 LRFVQANNRKL 555 L +A + L Sbjct: 582 LLLCEATRKVL 592 >gi|302383831|ref|YP_003819654.1| arginyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264] gi|302194459|gb|ADL02031.1| arginyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264] Length = 600 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 123/582 (21%), Positives = 229/582 (39%), Gaps = 91/582 (15%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A + R+ DP + +V +AG GFINL ++ + L + + G + + Sbjct: 54 NPRELAGRVAERLAADPRLSAVEVAGPGFINLKIADAALSARAAEVASDADHAGASPVAA 113 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 KV I+F N PMHVGH R A++G++L L F G +VT + + D G Q+ L + Sbjct: 114 PRKVVIDFGGPNVAKPMHVGHLRSAIIGESLKRLFRFRGDDVTGDAHFGDWGFQMGLLIV 173 Query: 180 SV--------FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-------KYSSELLNF 224 + F + +S + G +Y G+ D + ++ L Sbjct: 174 ACGDEGLADGFMADGDGPFPAESPVTLGDLDRLYPLAAGRAKEDPAFRDRARKATAELQG 233 Query: 225 PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQG 284 +L + + + + ++R + L + D++ E D DP I ++ +L + Sbjct: 234 GRPGYLALWRHFVAVSREALVR-EYGTLAVDFDLWNGESD---ADPL-IAGMVVDLKTKA 288 Query: 285 YVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFK 342 + E + + RK+ L ++V PLL S+GS Y DLA Sbjct: 289 LLVED--DGAQVVHVARPGETRKKKLADGSVVEAPSPPPLLVVSSEGSAMYGTTDLATIL 346 Query: 343 CKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL--LCELVRLYRDGMPIK 399 + R D ++YV+ + + +++ A++ + A+ L L DG P K Sbjct: 347 DRRNRIDPDLILYVVDERQAEHFEQV--FRASILARYAEPGSLEHLGFGTMNGTDGKPFK 404 Query: 400 MSKRAGDFITLRHVVD-------------EVGSD----------------SVRFMMLWRK 430 RAG + L ++ E+G+D +++F L Sbjct: 405 T--RAGGVLKLNDLITQATDKARDRLREAELGADLDEATFEDTAHKVAIAALKFADLSNS 462 Query: 431 NSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489 + FD + + K P Y+ Y R +S+ R+A + QE+ Sbjct: 463 RTTSYVFDLDRFMSFEGKTGP--YLLYQVVRIKSLLRRAAE----------------QEA 504 Query: 490 EF------DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + + +E L + L + + + A + P+ +A + Y LA F ++ Sbjct: 505 KAGLVAISEPAERDLALTLDAFDQAVVEAYDKRSPHVIAEHAYRLAQAFSKFYAA----- 559 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A + RL L A + L ++G+++P M Sbjct: 560 -CPVLAAADPATVGSRLTLSKAALDQLVIALGLLGIDAPERM 600 >gi|229196421|ref|ZP_04323168.1| Arginyl-tRNA synthetase 2 [Bacillus cereus m1293] gi|228587058|gb|EEK45129.1| Arginyl-tRNA synthetase 2 [Bacillus cereus m1293] Length = 595 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 83/300 (27%), Positives = 125/300 (41%), Gaps = 77/300 (25%) Query: 326 KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 KSDG+ Y DL A + GFD +YV+G + S + Q + Sbjct: 333 KSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQSLHFN--------------QFFTV 378 Query: 385 LCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE----------------- 416 L +L + DGM P KMS R G I L V++E Sbjct: 379 LKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPNLK 438 Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIF 465 VG +V F L KN + + +F +K + + P YVQY +AR SI Sbjct: 439 QKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSIL 494 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 R+ F F L D ++ L ++P+VIE A EP ++ Y+ Sbjct: 495 RKESVEFETCTFALK-----------DDHSWNIVKLLNKFPKVIEAACNKNEPSVISKYV 543 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 D+A F+ ++ + +R + N K + RL LV+AV ++ GL ++GVE+P EM Sbjct: 544 LDVAQSFNKYYGN------VRILDENAEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 595 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ + L I +++ILD +IE P+ G + L++ P IA Sbjct: 35 DYKKQFAESLSNIFTNELTQQQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPAIIA 91 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V G ++N++ + + +L +I+ EYG N G V Sbjct: 92 KEVAQKLS-DPFFAKVEAVGP-YVNVFFNRETVSDTVLKTILAEKEEYGHNHFGYEKTVV 149 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 150 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 202 >gi|114797992|ref|YP_761395.1| arginyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444] gi|123128508|sp|Q0BYP8|SYR_HYPNA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|114738166|gb|ABI76291.1| arginyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444] Length = 589 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 45/123 (36%), Positives = 62/123 (50%), Gaps = 1/123 (0%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P IA I AR+K V S +AG GFINL +S + L + + Sbjct: 54 NPREIAGEIAARLKEHASVLSAEVAGPGFINLRVSDAALSARAEHVRGDAMAGAEKAADA 113 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 V I+F AN PMHVGH R AV+GDTL + F+G EVT + ++ D G Q+ L Sbjct: 114 AVTV-IDFGGANVAKPMHVGHLRSAVIGDTLQRICRFAGDEVTSDVHLGDWGLQMGHLVT 172 Query: 180 SVF 182 ++ Sbjct: 173 ELY 175 >gi|238008168|gb|ACR35119.1| unknown [Zea mays] Length = 390 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 68/300 (22%), Positives = 125/300 (41%), Gaps = 60/300 (20%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P I + I + ++S +AG GF+N+ LS ++ + + ++V+GI+ ++ Sbjct: 128 NPNAIGQAIAKNLPSSDIIESTSVAGPGFVNIVLSNRWVAQRIQDMLVNGIKTWAPILPV 187 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA- 178 V I+F S N MHVGH R ++GDTLA + FS +V R ++ D G Q L Sbjct: 188 KRAV-IDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSNVDVLRRNHVGDWGTQFGMLIE 246 Query: 179 -------------------LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 L +F++ + ++ND + GV G+E +Y Sbjct: 247 YLFEKFPNWQEIGSQAIGDLQIFYKASKHRFDNDPEFKARAQQGVVRLQGGEE---RY-- 301 Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279 E W I I R + + + ++ + E +P I +++ Sbjct: 302 ------REAWKKIC---------DISRSEFDLVYKRLNVVLEEKGESFYNPY-IPQVLEE 345 Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339 L+ +G + E + +++F + G + ++KSDG + Y + DLA Sbjct: 346 LSSKGLIKES---------------EGARVIF---IQGHQIPLIVVKSDGGFNYASTDLA 387 >gi|323308834|gb|EGA62071.1| Msr1p [Saccharomyces cerevisiae FostersO] Length = 530 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 107/464 (23%), Positives = 188/464 (40%), Gaps = 83/464 (17%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIG 118 DP+ +A + + V G F+ +L YL + + +I++ +YG+ Sbjct: 92 DPVAVANRWAIELSTHGCIGKVCAKGP-FLQFFLDQRYLIQSTVPNILLQKGKYGQKKSR 150 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KV +EF S N P H GH R ++G L++L G+ VTR Y+ D G Q LA Sbjct: 151 HQKKVVVEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEAMGWSVTRMNYLGDWGRQFGLLA 210 Query: 179 LSVFWRY--QQALYNNDSDLPEGYYPGVYLKHVGKELADK---------YSSELLNF--- 224 + F RY ++ L P + VY+K + +LA + S E +F Sbjct: 211 VG-FKRYGDEKTLQKQ----PIQHLFDVYVK-INMDLAKEEINGNSKCGISGEARSFFKN 264 Query: 225 ---PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII--DN 279 +E + I K + ++ I+ LNI DIF E + + DI +N Sbjct: 265 LENGDENAIKIWKRFRSLSIHHYIQ-TYSRLNINFDIFSGESQVSKESMNEALDIFRKNN 323 Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL- 338 L ++ +G L ++ +++ +G V + KSDG+ Y D+ Sbjct: 324 LVKE---IDGALVIDLTQWSKR--------------LGRVV---VQKSDGTTLYLRRDVG 363 Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 A + K FD M+YV+ S Y+ + + ++N + ++ GM Sbjct: 364 AAIERKKNLHFDKMVYVISSQQDLYMSQFFMIL-------KKMNFEWAKDLQHINFGMVQ 416 Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWR--------------------------KNS 432 MS R G+ + L ++DE +++ M + K+ Sbjct: 417 GMSTRKGNVVFLDTILDEARDKALQIMENNKMKISQVDNPQRVADLIGVSAIIIQDMKSK 476 Query: 433 ELLDFDFCKVKEQSKENPVF-YVQYAYARCRSIFRQAKDIFPDL 475 + +++F + S E Y+QY ++R RS+ R + D D+ Sbjct: 477 RINNYEFNWNRMLSFEGDTGPYLQYTHSRLRSLERTSSDFTTDM 520 >gi|254293416|ref|YP_003059439.1| arginyl-tRNA synthetase [Hirschia baltica ATCC 49814] gi|254041947|gb|ACT58742.1| arginyl-tRNA synthetase [Hirschia baltica ATCC 49814] Length = 610 Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 3/143 (2%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P IA + +I+ V+SV +AG GF+N+ +S + L + I+ G + G + Sbjct: 54 NPREIAGEVAPKIEALELVESVDVAGPGFLNITVSAAALEGRTTEILADG-KAGGGSVET 112 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 V I+F N PMH+GH R ++GD+L L F G +VT + ++ D G Q+ L + Sbjct: 113 PRNVMIDFGGWNVAKPMHIGHLRSTIIGDSLQRLFRFLGDDVTSDVHLGDWGLQMGLLIV 172 Query: 180 SVFWRYQQALYNNDSDLPEGYYP 202 V Y +D+ EG YP Sbjct: 173 GVSEEQPDLPYFDDN--FEGEYP 193 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 41/175 (23%), Positives = 82/175 (46%), Gaps = 20/175 (11%) Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 + D+V +++F L ++ FD + V + K P Y+ YA R +S+ R+AK+ Sbjct: 454 IADKVALAAIKFADLSNVRTKNYVFDLDQFVAFEGKTGP--YLLYAAVRVKSLMRRAKE- 510 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQ-LIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 ++ + + E + L + L + ++ A + P+ + ++Y+LA Sbjct: 511 ----------EGIVAGAMKIELKEERVLALQLDAFEGALKLAYANRTPHGICDHVYNLAQ 560 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F W++ P L+ ++ K + RL L A + +GL++IG+E+P M Sbjct: 561 AFSSFWTNA---PILKAGVPDDVKAS--RLALAQATLKQLETGLSLIGIETPERM 610 >gi|225864159|ref|YP_002749537.1| arginyl-tRNA synthetase [Bacillus cereus 03BB102] gi|229184415|ref|ZP_04311622.1| Arginyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1] gi|225790718|gb|ACO30935.1| arginine--tRNA ligase [Bacillus cereus 03BB102] gi|228599211|gb|EEK56824.1| Arginyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1] Length = 562 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 83/300 (27%), Positives = 124/300 (41%), Gaps = 77/300 (25%) Query: 326 KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 KSDG+ Y DL A + GFD +YV+G + S + Q + Sbjct: 300 KSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQSLHFN--------------QFFTV 345 Query: 385 LCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE----------------- 416 L +L + DGM P KMS R G I L V++E Sbjct: 346 LKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPNLK 405 Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIF 465 VG +V F L KN + + +F +K + + P YVQY +AR SI Sbjct: 406 QKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSIL 461 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 R+ F F L D ++ L ++P VIE A EP ++ Y+ Sbjct: 462 RKESVEFETCTFTLK-----------DDYSWNIVKLLNKFPEVIEAACNKNEPSVISKYV 510 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 D+A F+ ++ + +R + N K + RL LV+AV ++ GL ++GVE+P EM Sbjct: 511 LDVAQSFNKYYGN------VRILDENAEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 562 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ + L I +K+ILD +IE P+ G + L++ P IA Sbjct: 2 DYKMQFAESLSNIFTNELTQKQILD--LIESPKQDEFGD-AAFPCFTLAKQYKKAPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V G ++N++ + + +L +I+ EYG+N G V Sbjct: 59 KEVAEKLS-DPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNYFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|229091172|ref|ZP_04222395.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock3-42] gi|228692303|gb|EEL46039.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock3-42] Length = 562 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 83/300 (27%), Positives = 124/300 (41%), Gaps = 77/300 (25%) Query: 326 KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 KSDG+ Y DL A + GFD +YV+G + S + Q + Sbjct: 300 KSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQSLHFN--------------QFFTV 345 Query: 385 LCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE----------------- 416 L +L + DGM P KMS R G I L V++E Sbjct: 346 LKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPNLK 405 Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIF 465 VG +V F L KN + + +F +K + + P YVQY +AR SI Sbjct: 406 QKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSIL 461 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 R+ F F L D ++ L ++P VIE A EP ++ Y+ Sbjct: 462 RKESVEFETCTFTLK-----------DDYSWNIVKLLNKFPEVIEAACNKNEPSVISKYV 510 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 D+A F+ ++ + +R + N K + RL LV+AV ++ GL ++GVE+P EM Sbjct: 511 LDVAQSFNKYYGN------VRILDENAEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 562 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ + L I +K+ILD +IE P+ G + L++ P IA Sbjct: 2 DYKMQFAESLSNIFTNELTQKQILD--LIESPKQDEFGD-AAFPCFTLAKQYKKAPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V G ++N++ + + +L +I+ EYG+N G V Sbjct: 59 KEVAEKLS-DPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNYFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|118477608|ref|YP_894759.1| arginyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] gi|118416833|gb|ABK85252.1| arginyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] Length = 562 Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 83/300 (27%), Positives = 124/300 (41%), Gaps = 77/300 (25%) Query: 326 KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 KSDG+ Y DL A + GFD +YV+G + S + Q + Sbjct: 300 KSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQSLHFN--------------QFFTV 345 Query: 385 LCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE----------------- 416 L +L + DGM P KMS R G I L V++E Sbjct: 346 LKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPNLK 405 Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIF 465 VG +V F L KN + + +F +K + + P YVQY +AR SI Sbjct: 406 QKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSIL 461 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 R+ F F L D ++ L ++P VIE A EP ++ Y+ Sbjct: 462 RKESVEFETCTFTLK-----------DDYSWNIVKLLNKFPEVIEAACNKNEPSVISKYV 510 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 D+A F+ ++ + +R + N K + RL LV+AV ++ GL ++GVE+P EM Sbjct: 511 LDVAQSFNKYYGN------VRILDENAEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 562 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ + L I +K+ILD +IE P+ G + L++ P IA Sbjct: 2 DYKMQFAESLSNIFTNELTQKQILD--LIESPKQDEFGD-AAFPCFTLAKQYKKAPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V G ++N++ + + +L +I+ EYG+N G V Sbjct: 59 KEVAEKLS-DPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNYFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|111115422|ref|YP_710040.1| arginyl-tRNA synthetase [Borrelia afzelii PKo] gi|216263411|ref|ZP_03435406.1| arginyl-tRNA synthetase [Borrelia afzelii ACA-1] gi|123145673|sp|Q0SMR4|SYR_BORAP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|110890696|gb|ABH01864.1| arginyl-tRNA synthetase [Borrelia afzelii PKo] gi|215980255|gb|EEC21076.1| arginyl-tRNA synthetase [Borrelia afzelii ACA-1] Length = 585 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 130/600 (21%), Positives = 241/600 (40%), Gaps = 105/600 (17%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I I++P G +S LS+ L L TI+E I+ +K ++ A ++N+ Sbjct: 33 INIQKPPKSDLGDISI-LIFELSKTLKLPIETISEEIIKALKAKYEIK----AMGPYLNI 87 Query: 92 YL-SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + Y+ + + YG + K+ +EF S N P+HVGH R V+G++L Sbjct: 88 KIPRKEYIHNTIQMVNAQKDTYGTSKYLDNKKIILEFSSPNTNKPLHVGHLRNDVIGESL 147 Query: 151 ASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRY---QQALYNNDSDLPEGYYPGVY 205 + ++ G ++ + IND G I + LA F ++A D + + Y Sbjct: 148 SRILKAVGAKIIKLNLINDRGVHICKSMLAYKKFGNEITPEKAFKKGDHFIGDFYVQYNK 207 Query: 206 LKHVGKELADKYSSELLNFPE------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHD-I 258 + ++ LL + + E W + +++++ I++ K N D I Sbjct: 208 YAQENENAEEEIQDLLLKWEQKDASTIELWKKL-NNWAIEG----IKETYKITNTSFDKI 262 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPPPKSKTTQKCDMDRKQLLFRST 314 ++ + F G ++++ +G+ Y+ I + +K D KQ Sbjct: 263 YLESEIFEIG-----KNVVLEGLEKGFCYKREDGAICIDLPLDSDEKTDTKVKQ------ 311 Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRL----EA 369 + L++S+G+ Y DL + E F+ MIYV+GS+ + K L E Sbjct: 312 -------KVLIRSNGTSIYLTQDLGNIAVRIKEFNFEEMIYVVGSEQIQHFKNLFFVSEK 364 Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--------TLRHVVDEVGSD- 420 + + ++K ++ + LV DG KM R G+ I + ++ E+ Sbjct: 365 LGISKNKKLFHLSHGMVNLV----DG---KMKSREGNVIDGDNLILDLMESILPEITQKI 417 Query: 421 ----------------SVRFMMLWRKNSELLDFDFCKVKEQS-KENPVFYVQYAYARCRS 463 ++ + +L K++ D F K + S N Y+QY AR S Sbjct: 418 ENKENAKKNALDIALGAIHYYLL--KSAIHKDIVFNKKESLSFTGNSGPYIQYVGARINS 475 Query: 464 IFRQAKD----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 I + I ++F+L + E E+D +I ++E I A P Sbjct: 476 ILEKYNTLSIPIIKKINFEL-----LEHEKEWD-----IIKIISELEENIIKAAKDLNPS 525 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 L Y Y LA F ++ +R + NN LT R++ + A+ I + + ++ + Sbjct: 526 ILTSYSYSLAKHFSAYYQ------EVRVIDINNIDLTAARIEFLKAILQTIKNCMYLLNI 579 >gi|229178575|ref|ZP_04305939.1| Arginyl-tRNA synthetase 2 [Bacillus cereus 172560W] gi|228604733|gb|EEK62190.1| Arginyl-tRNA synthetase 2 [Bacillus cereus 172560W] Length = 562 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 83/302 (27%), Positives = 127/302 (42%), Gaps = 81/302 (26%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG+ Y DL Y + Y GFD +YV+G + S + Q Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343 Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416 +L +L + DGM P KMS R G I L V++E Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463 VG +V F L KN + + +F +K + + P YVQY +AR S Sbjct: 404 LKQKEVVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ F F L D ++ L ++P+VIE A EP ++ Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEAAFNKNEPSIISK 508 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+ D+A F+ ++ + +R ++ + K + RL LV+AV ++ GL ++GVE+P Sbjct: 509 YILDVAQSFNKYYGN------VRILEESKEKDS--RLALVYAVTVVLKEGLRLLGVEAPE 560 Query: 584 EM 585 EM Sbjct: 561 EM 562 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ + L I +K+ILD +IE P+ G + L++ P IA Sbjct: 2 DYKMQFVESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ +P V G ++N++ + + +L +++ E+G+N G V Sbjct: 59 KEVAEKLN-NPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|315645723|ref|ZP_07898847.1| hypothetical protein PVOR_09605 [Paenibacillus vortex V453] gi|315279201|gb|EFU42511.1| hypothetical protein PVOR_09605 [Paenibacillus vortex V453] Length = 285 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/145 (35%), Positives = 70/145 (48%), Gaps = 14/145 (9%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVF---IAGKGFI 89 +E+P HG +TN AM L++ L PL IAELI ++ D P VF + GFI Sbjct: 33 VEQPSSMEHGDYATNIAMQLAKLLRKAPLHIAELIKTELEQDVPFKQLVFATEVVAPGFI 92 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 NL++ + + E K+ IE S NP H+GH R + +GDT Sbjct: 93 NLHIDWEAWANHPFELPPATHE----------KIVIEHTSINPNKSAHIGHLRNSCIGDT 142 Query: 150 LASLMAFSGYEVTREYYINDAGAQI 174 L LM GY+V YI+D G Q+ Sbjct: 143 LVRLMRKLGYKVEAHNYIDDLGNQL 167 >gi|229011482|ref|ZP_04168670.1| Arginyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048] gi|228749773|gb|EEL99610.1| Arginyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048] Length = 562 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 83/302 (27%), Positives = 129/302 (42%), Gaps = 81/302 (26%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG+ Y DL Y + Y GFD +YV+G + S + Q Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343 Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416 +L +L + DGM P KMS R G I L V++E Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRIILLEEVLEEAVALAEQNIEEKNPN 403 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463 VG +V F L KN + + +F +K + + P YVQY +AR S Sbjct: 404 LKQKEDVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ F F L + ++ S ++L L ++P+VIE A EP ++ Sbjct: 460 ILRKESVEFETCTFAL--------KDDYSWSVVKL---LNKFPQVIEAAFNKNEPSTISK 508 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+ D+A F+ ++ + +R ++ N K + RL L +AV ++ GL ++GV +P Sbjct: 509 YVLDVAQAFNKYYGN------VRILEENEEKES--RLALAYAVTVVLKEGLRLLGVGAPE 560 Query: 584 EM 585 EM Sbjct: 561 EM 562 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 ++ ++ L I + +ILD +IE P+ G + L++ P IA Sbjct: 2 NYKTQFAKSLSNIFTNELTQNQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V G ++N++ + + ++L I+ EYG+N G V Sbjct: 59 KELAEKLN-DPFFTKVEAVGP-YVNVFFNRETVSDEVLKIILAEKEEYGQNHFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|323457135|gb|EGB13001.1| hypothetical protein AURANDRAFT_18800 [Aureococcus anophagefferens] Length = 584 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 11/178 (6%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLD-------PLTIAELIVARIKIDPDVDSVFIAGK 86 + R + A G NA M + + L + P + E I A + + + S +A Sbjct: 23 VMRCGNAAFGDYQCNAPMGIFKTLKANGVARLPSPRAVGEAIAAAVPANGVLKSASVAPA 82 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNL--IGKGTKVNIEFVSANPTGPMHVGHCRCA 144 GFIN ++ S L + SG+ L G KV ++F S N MHVGH R Sbjct: 83 GFINAHVEESLLSAHAQRVAASGVAAPPPLSAFGGARKVLVDFSSPNIAKEMHVGHLRST 142 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN--NDSDLPEGY 200 ++GDT+ ++ F G++V R ++ D G Q L + Y L N N +DL Y Sbjct: 143 IIGDTICRVLEFCGHDVRRVNHVGDWGTQFGMLITHMEEAYPDFLQNPPNITDLTTFY 200 >gi|228965172|ref|ZP_04126266.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto str. T04001] gi|228794406|gb|EEM41918.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto str. T04001] Length = 481 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 83/302 (27%), Positives = 127/302 (42%), Gaps = 81/302 (26%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG+ Y DL Y + Y GFD +YV+G + S + Q Sbjct: 219 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 262 Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416 +L +L + DGM P KMS R G I L V++E Sbjct: 263 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 322 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463 VG +V F L KN + + +F +K + + P YVQY +AR S Sbjct: 323 LKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 378 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ F F L D ++ L ++P+VIE A EP ++ Sbjct: 379 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEAAFNKNEPSIISK 427 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+ D+A F+ ++ + +R ++ + K + RL LV+AV ++ GL ++GVE+P Sbjct: 428 YVLDVAQSFNKYYGN------VRILEESEEKDS--RLALVYAVTVVLKEGLRLLGVEAPE 479 Query: 584 EM 585 EM Sbjct: 480 EM 481 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 39/77 (50%) Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 +L +++ E+G+N G V I++ S N P +GH R ++G++L + GYE Sbjct: 12 VLKTVLAEKEEFGQNHFGCEKTVVIDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYE 71 Query: 161 VTREYYINDAGAQINTL 177 V YI D G Q L Sbjct: 72 VVGINYIGDWGTQFGKL 88 >gi|194378726|dbj|BAG63528.1| unnamed protein product [Homo sapiens] Length = 454 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 107/507 (21%), Positives = 201/507 (39%), Gaps = 110/507 (21%) Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA----------------- 178 MHVGH R ++G++++ L F+GY+V R ++ D G Q L Sbjct: 1 MHVGHLRSTIIGESISRLFEFAGYDVLRLNHVGDWGTQFGMLIAHLQDKFPDYLTVSPPI 60 Query: 179 --LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236 L VF++ + ++ + + + Y V L GK N K ++ D Sbjct: 61 GDLQVFYKESKKRFDTEEEFKKRAYQCVVLLQ-GK-----------NPDITKAWKLICDV 108 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 S Q + KI AL++ + + F++ + DI+ +G+V Sbjct: 109 SRQELNKI----YDALDVS--LIERGESFYQ---DRMNDIVKEFEDRGFV---------- 149 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYV 355 + D D ++++F + G + ++KSDG YTY +DLA K + +E D +IYV Sbjct: 150 ----QVD-DGRKIVF---VPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYV 201 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI-------KMSKRAGDFI 408 + + S + + + A A + ++ R++ G + K R+G+ + Sbjct: 202 VDNGQSVHFQTIFAAAQMIGWYDPKVT-------RVFHAGFGVVLGEDKKKFKTRSGETV 254 Query: 409 TLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDF 439 L ++ E V +++ L F F Sbjct: 255 RLMDLLGEGLKRSMDKLKEKERDKVLTAEELNAAQTSVAYGCIKYADLSHNRLNDYIFSF 314 Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQL 498 K+ + + N Y+ YA+ R RSI R A ++D ++ + + D E L Sbjct: 315 DKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEEMLQKAARETKILLDHEKEWNL 368 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 + +P +++ + L Y+Y+LA+ F + + R K+ M Sbjct: 369 GRCILRFPEILQKILDDLFLHTLCDYIYELATAFTEFYDSCYCVEKDR-QTGKILKVNMW 427 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 R+ L AVA+++ G +I+G++ M Sbjct: 428 RMLLCEAVAAVMAKGFDILGIKPVQRM 454 >gi|299138914|ref|ZP_07032091.1| Arginine--tRNA ligase [Acidobacterium sp. MP5ACTX8] gi|298599068|gb|EFI55229.1| Arginine--tRNA ligase [Acidobacterium sp. MP5ACTX8] Length = 661 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 89/360 (24%), Positives = 156/360 (43%), Gaps = 45/360 (12%) Query: 10 RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69 R+++ L E K VE L +VIE P G ++ A L++ L P IA+ + Sbjct: 12 RIQSLLAE---KYGVE---LTNLVIELPPKIEFGEMALPVAFELAKRLKKAPRAIAQELQ 65 Query: 70 ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129 + + P V SV IAG G++NL L + +++ + ++ G G ++ +E S Sbjct: 66 SALAELPGVASVEIAGAGYLNLKLDRA------ATVQRIAADEHASVGGAGFRL-VEHTS 118 Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMA----FSGYEVTREYYINDAGAQINTLALSVFWRY 185 NP HVGH R A++GD+ A ++ GYE + YI++ G Q+ + ++V Sbjct: 119 INPNKAAHVGHLRNAILGDSFARMLKPDEFKPGYETGVQNYIDNTGVQVADIVVAVTAVK 178 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKEL----ADKYSSELLNFPEEKWLPIVKDYSVQA- 240 L L E L +V +L + Y S+ K L + + ++A Sbjct: 179 GMTLDAVREWLTELLETNQRLDYVCWDLYAAVSQWYDSDPAQAAARKQLRLDTLHKIEAG 238 Query: 241 -----------MMKIIRDDLKA---LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286 ++R L+ L I++D E + + ARQ V Sbjct: 239 GNDTAEIAELISTGVLRRHLQTMERLGIEYDFLPRESEI-------LHLKFWETARQLMV 291 Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKY 345 +G+L + C + R+ + +T+ G D D + +++S+G+ TY D+AY K+ Sbjct: 292 EKGVLYLETEGKNKGCWVMRRAGV-EATLEGPDEDAKIIIRSNGTVTYVGKDIAYHLWKF 350 >gi|228914787|ref|ZP_04078396.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228845106|gb|EEM90148.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 562 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 82/300 (27%), Positives = 127/300 (42%), Gaps = 77/300 (25%) Query: 326 KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 KSDG+ Y DL A + GFD +YV+G + S + Q + Sbjct: 300 KSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQSLHFN--------------QFFTV 345 Query: 385 LCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE----------------- 416 L +L + DGM P KMS R G I L V++E Sbjct: 346 LKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPNLK 405 Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIF 465 VG+ +V F L KN + + +F +K + + P YVQY +AR SI Sbjct: 406 QKEEVAKQVGAGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSIL 461 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 R+ F F L D ++ L ++P+VIE A EP ++ Y+ Sbjct: 462 RKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEIAFNKNEPSVISKYV 510 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 D+A F+ ++ + +R ++ + K + RL LV+AV ++ GL ++GVE+P EM Sbjct: 511 LDVAQSFNKYYGN------VRILEESEEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 562 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ ++ L I +++ILD +IE P+ G + L++ P IA Sbjct: 2 DYKTQFAESLSNIFTNELTQQQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V G ++N++ + + +L +I+ EYG+N G V Sbjct: 59 KEVAEKLS-DPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGQNHFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|229190292|ref|ZP_04317293.1| Arginyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876] gi|228593076|gb|EEK50894.1| Arginyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876] Length = 562 Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 83/302 (27%), Positives = 127/302 (42%), Gaps = 81/302 (26%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG+ Y DL Y + Y GFD +YV+G + S + Q Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343 Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416 +L +L + DGM P KMS R G I L V++E Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463 VG +V F L KN + + +F +K + + P YVQY +AR S Sbjct: 404 LKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ F F L D ++ L ++P+VIE A EP ++ Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEAAFNKNEPSIISK 508 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+ D+A F+ ++ + +R ++ + K + RL LV+AV ++ GL ++GVE+P Sbjct: 509 YILDVAQSFNKYYGN------VRILEESAEKDS--RLALVYAVTVVLKEGLRLLGVEAPE 560 Query: 584 EM 585 EM Sbjct: 561 EM 562 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ + L I +K+ILD +IE P+ G + L++ P IA Sbjct: 2 DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + + D V G ++N++ + + +L +++ E+G+N G V Sbjct: 59 KEVAEKFN-DQFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|303390226|ref|XP_003073344.1| arginyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506] gi|303302490|gb|ADM11984.1| arginyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506] Length = 563 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 115/530 (21%), Positives = 217/530 (40%), Gaps = 97/530 (18%) Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 L+ +L I + +G N IGKG ++ +E+ S N H+GH R ++G + +L+ S Sbjct: 89 LKDVLGYIQSNKETFGNNSIGKGKRMVVEYSSPNIAKIFHIGHLRTTILGQFIVNLLKAS 148 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLKHV--GKE 212 GYE Y D G Q + L + Y ++ +L P + VY+K KE Sbjct: 149 GYETVSMNYFGDWGKQFGFVLLGY------SKYGSEEELEKDPLKHLFNVYVKISADAKE 202 Query: 213 --LADKYSSELLNFPEE---KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 D + E+ EE +W + + ++ + + LN++ D++ E +++ Sbjct: 203 NPEVDLEAREIFRKMEEENDEWCMNLWKRFRELSVEKYKSLYERLNVRFDVYSGESLYNK 262 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 ++I++ Y+ + K D D ++ +G + ++K+ Sbjct: 263 KG----KEIVE-------AYKEV----------KTDEDGSKVF----DLGKNRKVLVMKN 297 Query: 328 DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386 DG+ Y D+A + E+ + +IYV+ ++ + + + L + + +++ Sbjct: 298 DGTTLYITRDIAAAIERLEKYSPEKIIYVVSTEQNKHFEDLFKILGILGHDESKF----- 352 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML-WRKN-------------- 431 L Y G+ MS RAG L ++ E S + MM KN Sbjct: 353 -LHVSY--GLVAGMSTRAGKAQFLEDIIQESTSVMKKVMMSDSTKNSFTMDEIDQTAEVL 409 Query: 432 --SELLDFDFC-------------KVKEQSKENPVFYVQYAYARCRSIFRQAKDI-FPDL 475 S LL DF + + S P Y+QYA+ R +SI + D+ + D+ Sbjct: 410 AISTLLVMDFTARRVKGYEFDIEKRARNTSGTGP--YLQYAHCRLKSIESRNSDVDYSDI 467 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + F +P+ L+ L + +E EP ++ YL DLAS + Sbjct: 468 NTIDFSLIHVPE-------VFNLVYKLLWFEHAVEKCLDDYEPSRIVTYLQDLASCVNVA 520 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + V ++L RL ++ + ++++GL I+G N+M Sbjct: 521 INSLK-------VLGVEKELARARLLVLSSARIVLHNGLKILGATPLNKM 563 >gi|156083208|ref|XP_001609088.1| arginyl-tRNA synthetase [Babesia bovis T2Bo] gi|154796338|gb|EDO05520.1| arginyl-tRNA synthetase, putative [Babesia bovis] Length = 669 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 118/581 (20%), Positives = 224/581 (38%), Gaps = 92/581 (15%) Query: 36 RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLS 94 R D G + T A +S+ + T A + +K + D V F+ G ++N+ L Sbjct: 68 RIADGCEGDIHTKIAHTVSKLAQIPIETAAIRLRDELKKESDAVKDCFVTGNHYVNIVLH 127 Query: 95 PSYLRKILSSIVV-SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 Y+R +L + + G + GT V +++ S N +H+GH R A +G L+++ Sbjct: 128 DGYIRNVLREMDSDQAVRLGVPYMSSGTVV-VDYFSPNVGKDLHMGHLRSAAIGAALSNI 186 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQ----QALYNNDSD---------LPEGY 200 + F G V R ++ D G+Q + + Y +A + +D L +GY Sbjct: 187 LEFCGSRVIRRNHVGDFGSQSGQI-MRYLMEYDPTSIEAFTESQTDKERAKEFTRLIDGY 245 Query: 201 -----------------YPGVYLKHVGKELADKY--SSELLNFPEEKWLPIVKDYSVQAM 241 PGV + + + + Y + EL + E L ++ ++ Sbjct: 246 SIWSIKGITTSGRFSRPTPGVSAELIINTMGEIYKNAKELCDTDPEFQLRSKEETALLQR 305 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI------------IDNLARQGYVYE- 288 K + + ++ I D + IRD+ +D L +QG+ Sbjct: 306 GKHMYQECWKSIVKTSIASHRDILEQFKLDAIRDVPESCYAKRVFAFVDRLVKQGHALAR 365 Query: 289 ---GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345 I+ P ++ Q D ++L D L+ +G+ TY A D+ + + Sbjct: 366 PDGSIVIPWQALNEQSGDTPTEELH----------DLVLITKEGAATYLAVDITALEYRL 415 Query: 346 -ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404 E + +IY+ + ++ A+A + K Q L L DG ++ + Sbjct: 416 SEHKPNEIIYITDLAQKPHFDKVIAIARHIGFLKDQKIEHLGFGAVLSEDGKKMRSRTKT 475 Query: 405 GDFI------TLRHVVDEV------------------GSDSVRFMMLWRKNSELLDFDFC 440 G + TL+ +DEV S+ + L K+++ F Sbjct: 476 GVNVHDIWKYTLKRCLDEVEKKGEFLGQASMCMAHKLAVGSMLYADLSTKHTDTYVFSTD 535 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 ++ Q N + + Y Y R RSI R+ +D ++ DL+ ++ + + S QL Sbjct: 536 RLLNQGGNN-LISILYPYVRARSILRKIEQDAIKVVNEDLW---LVGGKPFLNRSARQLA 591 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 +H+ I + P++L Y+ L +F + + R Sbjct: 592 LHILGLENAIFTTAYLKTPHRLCKYVRSLGRIFTHFYDNNR 632 >gi|206971991|ref|ZP_03232939.1| arginyl-tRNA synthetase [Bacillus cereus AH1134] gi|206732914|gb|EDZ50088.1| arginyl-tRNA synthetase [Bacillus cereus AH1134] Length = 562 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 83/302 (27%), Positives = 127/302 (42%), Gaps = 81/302 (26%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG+ Y DL Y + Y GFD +YV+G + S + Q Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343 Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416 +L +L + DGM P KMS R G I L V++E Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463 VG +V F L KN + + +F +K + + P YVQY +AR S Sbjct: 404 LKQKEVVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ F F L D ++ L ++P+VIE A EP ++ Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEAAFNKNEPSIISK 508 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+ D+A F+ ++ + +R ++ + K + RL LV+AV ++ GL ++GVE+P Sbjct: 509 YILDVAQSFNKYYGN------VRILEESKEKDS--RLALVYAVTFVLKEGLRLLGVEAPE 560 Query: 584 EM 585 EM Sbjct: 561 EM 562 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ + L I +K+ILD +IE P+ G + L++ P IA Sbjct: 2 DYKMQFVESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + + DP V G ++N++ + + +L +++ E+G+N G V Sbjct: 59 KEVAEKFN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|323454276|gb|EGB10146.1| hypothetical protein AURANDRAFT_22930 [Aureococcus anophagefferens] Length = 644 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/145 (35%), Positives = 74/145 (51%), Gaps = 12/145 (8%) Query: 43 GHLSTNAAMILSRPLGLD--PLTIAELIVARIKIDPDVDSVF-----IAGKGFINLYLSP 95 G NAA+ LS+ LG P +A IV ++ D V SV IAG GF+NL LS Sbjct: 84 GDFQCNAALALSKKLGAPRPPRDVAADIVRALEADAGVASVVSFPLEIAGPGFVNLRLSD 143 Query: 96 SYLRKILSSIVVSGIEYGRNLIGKGT---KVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 YL + +++ GR + + V +++ S N MHVGH R V+GD LA+ Sbjct: 144 DYLARTAAAMAAD--ADGRCGVPRAAAPRTVVVDYSSPNIAKEMHVGHLRSTVIGDALAN 201 Query: 153 LMAFSGYEVTREYYINDAGAQINTL 177 + F+G++V R ++ D G Q L Sbjct: 202 CLEFAGHDVRRVNHVGDWGTQFGML 226 >gi|30262191|ref|NP_844568.1| arginyl-tRNA synthetase [Bacillus anthracis str. Ames] gi|47527469|ref|YP_018818.1| arginyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49185032|ref|YP_028284.1| arginyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|165872247|ref|ZP_02216885.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|167632845|ref|ZP_02391171.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0442] gi|167641054|ref|ZP_02399310.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0193] gi|170686613|ref|ZP_02877834.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0465] gi|170708447|ref|ZP_02898890.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|177650788|ref|ZP_02933685.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0174] gi|190567906|ref|ZP_03020817.1| arginyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I] gi|227815009|ref|YP_002815018.1| arginyl-tRNA synthetase [Bacillus anthracis str. CDC 684] gi|229600399|ref|YP_002866544.1| arginine--tRNA ligase [Bacillus anthracis str. A0248] gi|254737206|ref|ZP_05194910.1| arginyl-tRNA synthetase [Bacillus anthracis str. Western North America USA6153] gi|254743609|ref|ZP_05201294.1| arginyl-tRNA synthetase [Bacillus anthracis str. Kruger B] gi|254751521|ref|ZP_05203558.1| arginyl-tRNA synthetase [Bacillus anthracis str. Vollum] gi|254759036|ref|ZP_05211063.1| arginyl-tRNA synthetase [Bacillus anthracis str. Australia 94] gi|38372561|sp|Q81R81|SYR2_BACAN RecName: Full=Arginyl-tRNA synthetase 2; AltName: Full=Arginine--tRNA ligase 2; Short=ArgRS 2 gi|30256817|gb|AAP26054.1| arginine--tRNA ligase [Bacillus anthracis str. Ames] gi|47502617|gb|AAT31293.1| arginyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49178959|gb|AAT54335.1| arginyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|164712040|gb|EDR17579.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|167510952|gb|EDR86342.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0193] gi|167531657|gb|EDR94322.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0442] gi|170126686|gb|EDS95570.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|170669689|gb|EDT20431.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0465] gi|172083249|gb|EDT68310.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0174] gi|190560961|gb|EDV14935.1| arginyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I] gi|227004400|gb|ACP14143.1| arginine--tRNA ligase [Bacillus anthracis str. CDC 684] gi|229264807|gb|ACQ46444.1| arginine--tRNA ligase [Bacillus anthracis str. A0248] Length = 562 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 82/300 (27%), Positives = 127/300 (42%), Gaps = 77/300 (25%) Query: 326 KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 KSDG+ Y DL A + GFD +YV+G + S + Q + Sbjct: 300 KSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQSLHFN--------------QFFTV 345 Query: 385 LCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE----------------- 416 L +L + DGM P KMS R G I L V++E Sbjct: 346 LKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPNLK 405 Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIF 465 VG+ +V F L KN + + +F +K + + P YVQY +AR SI Sbjct: 406 QKEEVAKQVGAGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSIL 461 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 R+ F F L D ++ L ++P+VIE A EP ++ Y+ Sbjct: 462 RKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEIAFNKNEPSVISKYV 510 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 D+A F+ ++ + +R ++ + K + RL LV+AV ++ GL ++GVE+P EM Sbjct: 511 LDVAQSFNKYYGN------VRILEESEEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 562 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ ++ L I +++ILD +IE P+ G + L++ P IA Sbjct: 2 DYKTQFAESLSNIFTNELTQQQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V G ++N++ + + +L +I+ EYG+N G V Sbjct: 59 KEVAEKLS-DPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNYFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|229150431|ref|ZP_04278647.1| Arginyl-tRNA synthetase 2 [Bacillus cereus m1550] gi|228632924|gb|EEK89537.1| Arginyl-tRNA synthetase 2 [Bacillus cereus m1550] Length = 562 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 82/302 (27%), Positives = 127/302 (42%), Gaps = 81/302 (26%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG+ Y DL Y + Y GFD +YV+G + S + Q Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343 Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416 +L +L + DGM P KMS R G I L V++E Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463 VG +V F L KN + + +F +K + + P YVQY +AR S Sbjct: 404 LKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ F F L D ++ L ++P++IE A EP ++ Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIEAAFNKNEPSIISK 508 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+ D+A F+ ++ + +R ++ + K + RL LV+AV ++ GL ++GVE+P Sbjct: 509 YILDVAQSFNKYYGN------VRILEESKEKDS--RLALVYAVTVVLKEGLRLLGVEAPE 560 Query: 584 EM 585 EM Sbjct: 561 EM 562 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ + L I +K+ILD +IE P+ G + L++ P IA Sbjct: 2 DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + + DP V G ++N++ + + +L +++ E+G+N G V Sbjct: 59 KEVAEKFN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|320010139|gb|ADW04989.1| arginyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331] Length = 589 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 80/303 (26%), Positives = 126/303 (41%), Gaps = 65/303 (21%) Query: 323 PLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVSEK 377 PL+ K++G Y Y A DL+ + + D ++YV+ + S + K + A A Sbjct: 312 PLIVKKTNGGYGYAATDLSAIRDRVRNLKADTLLYVVDARQSLHFKMVFETARRAGWLND 371 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416 + + L V L +DG P K R G + L ++DE Sbjct: 372 DVKAHQLAFGTV-LGKDGKPFKT--REGTTVRLEDLLDEAVERATAVVREKAEKVGLSEE 428 Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG +V++ L FD ++ + + V Y+QYAYAR RSI R+A Sbjct: 429 EIVENGRYVGVGAVKYADLSTSAVRDYKFDLDQMVSLNGDTSV-YLQYAYARIRSILRKA 487 Query: 469 KDIFPDL--DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 D P + DL P +E L +HL ++ V+E EP+KLA YLY Sbjct: 488 GDAKPAAHPELDLAP------------AERALGLHLDQFGAVLEEVAEGYEPHKLAAYLY 535 Query: 527 DLASVFHGHWSHGR----ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 LAS + + ENP ++ RL LV A ++ G+ ++G+ +P Sbjct: 536 QLASHLTTFYDQCQVLSDENP---------AEVVENRLFLVELTARTLHQGMKLLGIRTP 586 Query: 583 NEM 585 + Sbjct: 587 ERL 589 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 2/150 (1%) Query: 45 LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104 N + L++ L +P +A + A + + + ++G GF+N+ L+ + L++ Sbjct: 41 FQANGILALAKKLKGNPRELASQVTAALPAGDLIKDIEVSGPGFLNVTLTDRAIITTLAA 100 Query: 105 IVVSGIEYG-RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR 163 G G GT V I++ N MHVGH R AV+GD + ++ F+G V R Sbjct: 101 RAADGDRLGVPPKAAPGTTV-IDYAQPNVAKEMHVGHLRSAVIGDAMVQILEFTGENVVR 159 Query: 164 EYYINDAGAQINTLALSVFWRYQQALYNND 193 ++I D G Q L +F + + D Sbjct: 160 RHHIGDWGTQFGMLIQYLFEHPDELRHGGD 189 >gi|229069737|ref|ZP_04203022.1| Arginyl-tRNA synthetase 2 [Bacillus cereus F65185] gi|228713358|gb|EEL65248.1| Arginyl-tRNA synthetase 2 [Bacillus cereus F65185] Length = 562 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 82/302 (27%), Positives = 127/302 (42%), Gaps = 81/302 (26%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG+ Y DL Y + Y GFD +YV+G + S + Q Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343 Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416 +L +L + DGM P KMS R G I L V++E Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463 VG +V F L KN + + +F +K + + P YVQY +AR S Sbjct: 404 LKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ F F L D ++ L ++P++IE A EP ++ Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIEAAFNKNEPSIISK 508 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+ D+A F+ ++ + +R ++ + K + RL LV+AV ++ GL ++GVE+P Sbjct: 509 YILDVAQSFNKYYGN------VRILEESKEKDS--RLALVYAVTVVLKEGLRLLGVEAPE 560 Query: 584 EM 585 EM Sbjct: 561 EM 562 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ + L I +K+ILD +IE P+ G + L++ P IA Sbjct: 2 DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ +P V G ++N++ + + +L +++ E+G+N G V Sbjct: 59 KEVAEKLN-NPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|282854895|ref|ZP_06264229.1| arginine--tRNA ligase [Propionibacterium acnes J139] gi|282582041|gb|EFB87424.1| arginine--tRNA ligase [Propionibacterium acnes J139] Length = 556 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 7/138 (5%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH +N A+ L++ P +A IVA++ I+ ++ IAG GFINL L L ++ Sbjct: 31 GHFQSNVALRLAKEEKRPPRDVAADIVAKLDIEDLCETPEIAGPGFINLRLRADVLARVA 90 Query: 103 SSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 S V +GI K +V I++ + N MHVGH R ++GD +++ G+ Sbjct: 91 SDFVTDPNAGIAQAE----KPERVVIDYSAPNVAKQMHVGHLRSTIIGDCFNRVLSAQGH 146 Query: 160 EVTREYYINDAGAQINTL 177 V + +I D G Q L Sbjct: 147 TVIPQNHIGDWGTQFGML 164 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 29/282 (10%) Query: 321 DRPLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA--AAVS 375 D P++ K DG + Y A DLA + + + D +IYV S + + L VA A Sbjct: 287 DAPMIVRKRDGGFGYDATDLAAIRRRVGKLKADRIIYVTDVRQSHHFEVLFQVARMAGFL 346 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML----WRKN 431 + + +V L DG P K R G ++L ++DE + + + L + Sbjct: 347 PDDVEAEHVGYGMV-LGPDGRPFKT--REGGTVSLSDLLDEAETHAAPNIALAAIKYADL 403 Query: 432 SELLDFDFCKVKE---QSKENPVFYVQYAYARCRSIFRQAK-----DIFPDLDFDLFPRN 483 S L D+ E Q+ + Y+QYA+AR I R+A ++ P+ D D Sbjct: 404 SNGLQKDYVFDAERMVQTTGDTGPYLQYAHARVSQILRKAAAEANPNVDPEADLDAMDWG 463 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 I E +E QL + L+ + ++E P+KL YLY+LA + + + P Sbjct: 464 RISVLDE--PAEQQLALLLSRFGEIVEVVATDLTPHKLCTYLYELAGAYSVFYE---QCP 518 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LR + ++ RL L A ++ GL+++G+++P+ M Sbjct: 519 VLR----STGEVRGSRLALCAATRRVLGRGLDLLGIDAPDRM 556 >gi|254721052|ref|ZP_05182843.1| arginyl-tRNA synthetase [Bacillus anthracis str. A1055] Length = 562 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 82/300 (27%), Positives = 127/300 (42%), Gaps = 77/300 (25%) Query: 326 KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 KSDG+ Y DL A + GFD +YV+G + S + Q + Sbjct: 300 KSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQSLHFN--------------QFFTV 345 Query: 385 LCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE----------------- 416 L +L + DGM P KMS R G I L V++E Sbjct: 346 LKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPNLK 405 Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIF 465 VG+ +V F L KN + + +F +K + + P YVQY +AR SI Sbjct: 406 QKEEVAKQVGAGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSIL 461 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 R+ F F L D ++ L ++P+VIE A EP ++ Y+ Sbjct: 462 RKESVEFETYTFALK-----------DDHSWSVVKLLNKFPQVIEIAFNKNEPSVISKYV 510 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 D+A F+ ++ + +R ++ + K + RL LV+AV ++ GL ++GVE+P EM Sbjct: 511 LDVAQSFNKYYGN------VRILEESEEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 562 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ ++ L I +++ILD +IE P+ G + L++ P IA Sbjct: 2 DYKTQFAESLSNIFTNELTQQQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V G ++N++ + + +L +I+ EYG+N G V Sbjct: 59 KEVAEKLS-DPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNYFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|228955955|ref|ZP_04117891.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228803735|gb|EEM50418.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 562 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 82/302 (27%), Positives = 127/302 (42%), Gaps = 81/302 (26%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG+ Y DL Y + Y GFD +YV+G + S + Q Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343 Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416 +L +L + DGM P KMS R G I L V++E Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463 VG +V F L KN + + +F +K + + P YVQY +AR S Sbjct: 404 LKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ F F L D ++ L ++P++IE A EP ++ Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIEAAFNKNEPSIISK 508 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+ D+A F+ ++ + +R ++ + K + RL LV+AV ++ GL ++GVE+P Sbjct: 509 YILDVAQSFNKYYGN------VRILEESEEKDS--RLALVYAVTVVLKEGLRLLGVEAPE 560 Query: 584 EM 585 EM Sbjct: 561 EM 562 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ + L I +K+ILD +IE P+ G + L++ P IA Sbjct: 2 DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ +P V G ++N++ + + +L +++ E+G+N G V Sbjct: 59 KEVAEKLN-NPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|145481313|ref|XP_001426679.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124393755|emb|CAK59281.1| unnamed protein product [Paramecium tetraurelia] Length = 600 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 124/573 (21%), Positives = 224/573 (39%), Gaps = 133/573 (23%) Query: 75 DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG 134 D + V KGF+N+ L+ ++ + +++++V+G+++ + K KV ++F S N Sbjct: 89 DNVIQKVEAIDKGFLNIQLNDKFIEEEINALLVNGLKFP---LEKKQKVAVDFSSPNIAK 145 Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS 194 MHVGH R ++G++L ++ F G EV R +I D G Q L + Y N Sbjct: 146 EMHVGHLRSTILGESLCRILEFQGQEVVRINHIGDWGTQFGMLINHLLEEYPDYQTNR-- 203 Query: 195 DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254 P + KEL D Y F +++ V++ +++ L+AL Sbjct: 204 -------PAL------KELEDLYKEAKKKFDSN------EEFKVKSQQFVVK--LQAL-- 240 Query: 255 QHDIFISEDDFHRGDPSPIR--DIIDNLARQGY--VY-----------EGILPPPKSKTT 299 DP I +I L+RQ Y +Y E P ++ Sbjct: 241 --------------DPICIDAWKMICELSRQEYNKIYQRLNVKITEYGESYYNPILNEIV 286 Query: 300 QKC------DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNM 352 ++C ++D+ + R + G+ V ++K DG Y Y D+A K + E D + Sbjct: 287 KECEAKGIVELDQGAKIIR--VKGEKVPLMIVKKDGGYNYDTTDMAAAKTRILEWKCDRL 344 Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKK---AQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 +Y+ + K + A + + + + LV L DG K R+GD + Sbjct: 345 LYLTDVGQWNHFKLVFEGAKLMGWHQPPNTSMEHMGFGLV-LGPDGK--KFKTRSGDTVK 401 Query: 410 LRHVVDE---------------------------------------VGSDSVRFMMLWRK 430 L ++DE +G ++++ L + Sbjct: 402 LIDLLDEAKERALKQIQQRVQENQQGKEFSTGTALSPEEFETAAERMGIAAIKYYDLKQN 461 Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490 +FD+ K+ + K N Y+ Y+Y R SI R++ DF++F + + Sbjct: 462 RISDYNFDYDKMLD-PKGNTAVYLMYSYVRMLSILRKS----GIQDFEVFKAD-----HK 511 Query: 491 FDTS---ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 F + E L L + V+++ T L Y+YD+ ++ R Sbjct: 512 FKITHQHERHLAAQLLRFVDVLQSVTDQLAINWLCDYIYDICVKIAEAYNQYR------- 564 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 N + T RL L AV ++ ++G+E Sbjct: 565 --ILNDEHTQTRLLLCEAVRMVLLQSFYLVGIE 595 >gi|291333572|gb|ADD93266.1| hypothetical protein [uncultured archaeon MedDCM-OCT-S08-C92] Length = 196 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 4/97 (4%) Query: 86 KGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 K F N+ L +L I I S EYGR + K + +E SAN TGP H+G R Sbjct: 78 KAFCNIVLDWDFLFEDIFDEINNS--EYGRG-VSKPDSILLEHTSANATGPFHMGRARNP 134 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 ++GD+++ L+ + GYEV+ EYY+ND G Q T+A + Sbjct: 135 IIGDSVSRLLKYYGYEVSTEYYVNDTGRQAATVAYGI 171 >gi|228939320|ref|ZP_04101912.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228972198|ref|ZP_04132813.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978812|ref|ZP_04139182.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407] gi|228780914|gb|EEM29122.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407] gi|228787511|gb|EEM35475.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820344|gb|EEM66377.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326939896|gb|AEA15792.1| arginyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis CT-43] Length = 562 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 82/302 (27%), Positives = 127/302 (42%), Gaps = 81/302 (26%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG+ Y DL Y + Y GFD +YV+G + S + Q Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343 Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416 +L +L + DGM P KMS R G I L V++E Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463 VG ++ F L KN + + +F +K + + P YVQY +AR S Sbjct: 404 LKQKEVVAKQVGVGAIIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ F F L D ++ L ++P+VIE A EP ++ Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEAAFNKNEPSIISK 508 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+ D+A F+ ++ + +R ++ + K + RL LV+AV ++ GL ++GVE+P Sbjct: 509 YVLDVAQSFNKYYGN------VRILEESEEKDS--RLALVYAVTVVLKEGLRLLGVETPE 560 Query: 584 EM 585 EM Sbjct: 561 EM 562 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ + L I +K+ILD +IE P+ G + L++ P IA Sbjct: 2 DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V G ++N++ + + +L ++ E+G+N G V Sbjct: 59 KEVAEKLN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVSAEKEEFGQNHFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|29831291|ref|NP_825925.1| arginyl-tRNA synthetase [Streptomyces avermitilis MA-4680] gi|39932148|sp|Q82E68|SYR_STRAW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|29608406|dbj|BAC72460.1| putative arginyl-tRNA synthetase [Streptomyces avermitilis MA-4680] Length = 590 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 65/133 (48%) Query: 45 LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104 N + L++ +P +A +VAR++ + + ++G GF+N+ ++ + + L++ Sbjct: 41 FQANGILALAKKAKANPRDLATQVVARVESGEVIKDIEVSGPGFLNITITDQAITRNLAA 100 Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164 G G L I++ N MHVGH R AV+GD + ++ F+G V R Sbjct: 101 RYEDGERLGVPLAEHPGTTVIDYAQPNVAKEMHVGHLRSAVIGDAVVQILEFTGENVVRR 160 Query: 165 YYINDAGAQINTL 177 ++I D G Q L Sbjct: 161 HHIGDWGTQFGML 173 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 78/297 (26%), Positives = 127/297 (42%), Gaps = 53/297 (17%) Query: 323 PLL--KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVA--AAVSEK 377 PL+ KSDG Y Y A DL+ + + + +++IYV+ + S + K + A A Sbjct: 313 PLIVKKSDGGYGYAATDLSAIRDRVFNLKANSLIYVVDARQSLHFKMVFETARRAGWLND 372 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416 Q L V L +DG P K R G+ I L ++DE Sbjct: 373 DVQAQQLAFGTV-LGKDGKPFKT--REGETIRLVDLLDEAIDRATAVVREKAEKVGLSEQ 429 Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG +V++ L FD ++ + + V Y+QYAYAR RSIF +A Sbjct: 430 EIEENGRYVGIGAVKYADLSTSAVRDYKFDLDQMVSLNGDTSV-YLQYAYARIRSIFGKA 488 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 D P + E E +E L +HL + ++ P+KLA YLY L Sbjct: 489 GDRTP----------LAHPELELAPAERALGLHLDRFGETLDEVAAEYAPHKLAAYLYQL 538 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 AS++ + + P ++ A +++ RL L A ++ G+ ++G+ +P + Sbjct: 539 ASLYTTFYD---QCPVIK--PAPAQEVAENRLFLCDLTARTLHQGMALLGIRTPERL 590 >gi|94985140|ref|YP_604504.1| arginyl-tRNA synthetase [Deinococcus geothermalis DSM 11300] gi|94555421|gb|ABF45335.1| arginyl-tRNA synthetase [Deinococcus geothermalis DSM 11300] Length = 628 Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 14/197 (7%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D + LK +++ ++ +D + E P + G T AA +++ LG +P +A Sbjct: 21 DLKAELKAAVQQAAAELGAP---VDVAIQETPANKP-GDYGTPAAFQMAKALGQNPAQVA 76 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 + ++++ + V AG F+N ++ + + V + +E + + KV I Sbjct: 77 AQLAQKVRLPAGIARVEAAGP-FLNFFVD-------VGAFVRAVVEEPTRIPAQSGKVVI 128 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFW 183 E S NP +HVGH R V+GD+LA + +G+ V + YI+D G Q + A+ + Sbjct: 129 EHTSVNPNKELHVGHLRNVVLGDSLARIFRAAGHTVEVQNYIDDTGRQTAESLFAVKHYG 188 Query: 184 RYQQALYNNDSDLPEGY 200 R + D L EGY Sbjct: 189 RVWDGVQKYDHWLGEGY 205 Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 43/175 (24%), Positives = 80/175 (45%), Gaps = 10/175 (5%) Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 + +G ++RF ML + + +DF + + + + YVQYA R +I R+A++ Sbjct: 462 IARRIGIGAIRFAMLKAEPTRKIDFRWDQALALNGDT-APYVQYAAVRAANILRKAQEAG 520 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 D + +P + D + +++ L P V+ A P+ +A Y DLA+ F Sbjct: 521 YATDGSGADWSALP---DIDVNLAKMVARL---PEVVAQAVRVHSPHVVAQYALDLATAF 574 Query: 533 HGHWSHGREN--PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++ +N P +Q + L RL LV + L++IG++ P M Sbjct: 575 NAWYNAKDKNGKPATNVLQ-SPAGLREARLALVARLRKGFEETLDLIGIQVPAAM 628 >gi|75760440|ref|ZP_00740481.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218897175|ref|YP_002445586.1| arginyl-tRNA synthetase [Bacillus cereus G9842] gi|228900799|ref|ZP_04065014.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222] gi|74492065|gb|EAO55240.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218545741|gb|ACK98135.1| arginyl-tRNA synthetase [Bacillus cereus G9842] gi|228858725|gb|EEN03170.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222] Length = 562 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 82/302 (27%), Positives = 127/302 (42%), Gaps = 81/302 (26%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG+ Y DL Y + Y GFD +YV+G + S + Q Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343 Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416 +L +L + DGM P KMS R G I L V++E Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463 VG +V F L KN + + +F +K + + P YVQY +AR S Sbjct: 404 LKQKEVVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ F F L D ++ L ++P++IE A EP ++ Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIEAAFNKNEPSIISK 508 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+ D+A F+ ++ + +R ++ + K + RL LV+AV ++ GL ++GVE+P Sbjct: 509 YVLDVAQSFNKYYGN------VRILEESKEKDS--RLALVYAVTVVLKEGLRLLGVEAPE 560 Query: 584 EM 585 EM Sbjct: 561 EM 562 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ + L I +K+ILD +IE P+ G + L++ P IA Sbjct: 2 DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKKYKKAPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ +P V G ++N++ + + +L +++ E+G+N G V Sbjct: 59 KEVAEKLN-NPFFMKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|302535095|ref|ZP_07287437.1| arginyl-tRNA synthetase [Streptomyces sp. C] gi|302443990|gb|EFL15806.1| arginyl-tRNA synthetase [Streptomyces sp. C] Length = 589 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 79/296 (26%), Positives = 128/296 (43%), Gaps = 52/296 (17%) Query: 323 PLL--KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRL-EAVAAAVSEKK 378 PL+ KSDG + Y A DL+ + + + ++IYV+ + S + K + E A Sbjct: 313 PLIVQKSDGGFGYAATDLSAIRNRVTDLAATSLIYVVDARQSLHFKMVFETARRAGWLND 372 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 V L L +DG P K R G+ + L ++DE Sbjct: 373 GVKAVQLAFGTVLGKDGKPFKT--REGETVRLVDLLDEAVERATAVVREKAEKVGLTEAE 430 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 VG +V++ L + FD ++ + + V Y+QYAYAR RSI R A Sbjct: 431 IVENGQYVGIGAVKYADLSTSAARDYKFDLDQMVSLNGDTSV-YLQYAYARIRSIMRNAG 489 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 D P V E E +E L +HL + +IE A P+KLA YLY L+ Sbjct: 490 DRKP----------VAHPELELAPAERALGLHLDGFGALIEEAAADYAPHKLAAYLYQLS 539 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 S++ ++ + P L+ A+ + RL L A ++ G+ ++G+ +P ++ Sbjct: 540 SLYTTFYA---DCPVLK---ADTPEQVENRLFLCDLTARTLSKGMALLGIRTPEKL 589 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 10/163 (6%) Query: 24 VEKKILDRIVIERP---------RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI 74 VE+++ D + P R N + L++ +P +A ++ + Sbjct: 11 VEQRVSDALASALPEAGAADPLLRRSDRADFQANGILALAKKAKANPRELAATVLEGLDK 70 Query: 75 DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG 134 + V ++G GF+N+ +S + + L++ G L G I++ N Sbjct: 71 SGVIKEVEVSGPGFLNITVSDEAIIRTLAARAADD-RLGVPLNGSAGTTVIDYAQPNVAK 129 Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 MHVGH R AV+G + ++ F+G +V R ++I D G Q L Sbjct: 130 EMHVGHLRSAVIGAAMVEILEFTGEKVIRRHHIGDWGTQFGML 172 >gi|228920921|ref|ZP_04084259.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228838710|gb|EEM84013.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 562 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 82/302 (27%), Positives = 127/302 (42%), Gaps = 81/302 (26%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG+ Y DL Y + Y GFD +YV+G + S + Q Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343 Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416 +L +L + DGM P KMS R G I L V++E Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463 VG +V F L KN + + +F +K + + P YVQY +AR S Sbjct: 404 LKQKEVVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ F F L D ++ L ++P++IE A EP ++ Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIEAAFNKNEPSFISK 508 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+ D+A F+ ++ + +R ++ + K + RL LV+AV ++ GL ++GVE+P Sbjct: 509 YILDVAQSFNKYYGN------VRILEESKEKDS--RLALVYAVTVVLKEGLRLLGVEAPE 560 Query: 584 EM 585 EM Sbjct: 561 EM 562 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ + L I +K+ILD +IE P+ G + L++ P IA Sbjct: 2 DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + + DP V G ++N++ + + +L +++ E+G+N G V Sbjct: 59 KEVAEKFN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|149638964|ref|XP_001513391.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 695 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 121/565 (21%), Positives = 235/565 (41%), Gaps = 95/565 (16%) Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRN----LIGK 119 A+ + ++K D V + G G +N ++ L K +L + +YG L Sbjct: 182 AQSLAKKLKCDTVVSEI-STGPGTVNFKINRELLTKTVLQQVFEDDSKYGLKSELFLELP 240 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 KV +EF S N H GH R ++G+ +A+L G+ VTR Y+ D G Q L Sbjct: 241 PKKVVVEFSSPNVAKKFHAGHLRSTIIGNFIANLNEALGHRVTRINYLGDWGMQFGLLGT 300 Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE--------LLNFPEEKWL 230 + Y++ L +N P + VY++ V KE AD + E L +++ L Sbjct: 301 GFQLFGYEEKLQSN----PLQHLYDVYVQ-VNKEAADDKNVEKSAHEFFRRLETGDQEAL 355 Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290 + K + ++ +R K L + D + E +H ++++ L +G + + + Sbjct: 356 SLWKKFRDLSITDYVR-VYKRLGVHFDDYSGESFYHEKS----QEVLKLLDSKGLLQKTM 410 Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GF 349 ++K D S+++ ++++DG+ Y DLA + ++ F Sbjct: 411 QGAAVVDLSEKGD---------SSLIC-----AVMRNDGTSLYATRDLAAAIDRMDKYHF 456 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 D+MIYV + +++ + + + A+ C+ V G+ M R GD Sbjct: 457 DSMIYVTDKSQRRHFQQVFQILRLMGYEWAE----RCQHVPF---GIVQGMKTRRGDVTF 509 Query: 410 LRHVVDE---------VGSDSVRFMMLWRKNSE----------------LLDFDFCKVKE 444 L V++E S + + + ++ +E L D+ F + Sbjct: 510 LEDVLNEACLRMLDNMASSKTTKGLENPQETAERVGLAALIVHDLRGLLLSDYQFSWDRV 569 Query: 445 -QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503 Q++ + ++QY +AR S+ ++ F + F + + QE + + ++ HL Sbjct: 570 LQTRGDTGVFLQYTHARLHSL----EETFGCAGLNGFNASCL-QEPQ----SVSILQHLL 620 Query: 504 EYPRVIENATIAQEPYKLAFYLY---DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 Y V+ ++ +P + YL LA+V H S ++ + ++ RL Sbjct: 621 RYDEVLYKSSQDLQPRHIVNYLLILSHLAAVAHKTLS----------IRNSPTEVAEARL 670 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 L AV S++ SG+ ++G+ +M Sbjct: 671 HLFKAVRSVLASGMKLLGITPVTKM 695 >gi|297622706|ref|YP_003704140.1| arginyl-tRNA synthetase [Truepera radiovictrix DSM 17093] gi|297163886|gb|ADI13597.1| arginyl-tRNA synthetase [Truepera radiovictrix DSM 17093] Length = 607 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 74/303 (24%), Positives = 131/303 (43%), Gaps = 32/303 (10%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKI 101 G + A L+R L +P IA+ +V R+++ V G ++N +L P +++R + Sbjct: 35 GDYGSPVAFGLARVLRKNPAAIAQELVERLELPAGVARAEAVGP-YLNFHLDPGAFVRGV 93 Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161 +E L +G KV +E S NP HVGH R V+GD +A ++ +GYEV Sbjct: 94 --------VEGELALPERGKKVIVEHTSVNPNKEAHVGHLRNIVLGDAVARILRAAGYEV 145 Query: 162 TREYYINDAGAQI--NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS 219 + YI+D G Q + A+ F D L + Y K E ++ S Sbjct: 146 EVQNYIDDTGRQAAESLFAVGYFGATYDGAEKYDHWLGKLYVRLTQAKETDAETIERGVS 205 Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279 + ++ E L ++ +++ + AL ++D+ + E D + + ++ Sbjct: 206 QTMHRLERGEL----RGEIERVLRAQLETYHALGAEYDLLVWESDIVK--SGFLARALEV 259 Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAA 336 L R E + P + K MD +L+ ++ P L++SDG+ Y A Sbjct: 260 LKRS----EDVFTPSEGKYAGALVMDVSKLI-------PGLEEPLVVLVRSDGNAMYVAK 308 Query: 337 DLA 339 D+ Sbjct: 309 DIG 311 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 14/176 (7%) Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 V +VG ++RF ML + ++DF + + + Q P YVQYA+AR SI R A + Sbjct: 443 VARQVGVGALRFAMLKSEARRVIDFRWEQALSLQGDSAP--YVQYAHARACSILRAACEA 500 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 ++ R E++L LA P +I +A P+ + Y D+A+ Sbjct: 501 GVGESGAVWER--------LGPLEVKLAQELARLPEIIGSAARDFAPHLVGQYCLDVATA 552 Query: 532 FHGHWSH--GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ +++H P + ++A L RL LV V + + L ++G+E+P EM Sbjct: 553 WNAYYNHRGADGKPDTQVLKAEP-GLREARLALVRKVKETLATSLGLLGIEAPEEM 607 >gi|325188174|emb|CCA22714.1| arginyltRNA synthetase putative [Albugo laibachii Nc14] Length = 803 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 19/181 (10%) Query: 34 IERPRDCAHGHLSTNAAMIL-----SRPLGL-DPLTIAELIVARIKI--DPDVDS-VFIA 84 + R ++ G N+AM + P L P +A I+ +K +P + S + +A Sbjct: 246 VTRTKNAQFGDYQCNSAMSIFTAMKGTPNALKSPRDVANAIINAMKQIENPVLQSELTVA 305 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 G GFIN L PS+L L S++ G + KV ++F S N MHVGH R Sbjct: 306 GAGFINARLEPSFLSARLVSLLKHGAQASPET--NRIKVVVDFSSPNIAKDMHVGHLRST 363 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-----WRYQQALYNNDSDLPEG 199 ++GD + ++ F GY+V R ++ D G Q L + W +Q N +DL + Sbjct: 364 IIGDAICRILEFQGYDVARINHVGDWGTQFGMLICHLIDAYPTWESEQP---NVTDLTKL 420 Query: 200 Y 200 Y Sbjct: 421 Y 421 >gi|16120221|ref|NP_395809.1| arginine-tRNA synthetase [Halobacterium sp. NRC-1] gi|169237481|ref|YP_001690685.1| arginine--tRNA ligase [Halobacterium salinarum R1] gi|23822206|sp|Q9HHN2|SYR_HALSA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|10584349|gb|AAG20944.1| arginine-tRNA synthetase [Halobacterium sp. NRC-1] gi|167728708|emb|CAP15552.1| arginine--tRNA ligase [Halobacterium salinarum R1] Length = 631 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 85/329 (25%), Positives = 136/329 (41%), Gaps = 54/329 (16%) Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP--LLKSDGSYTYFAADLAYFKCK 344 YE + P + D R+ + D D P ++KSDGS Y DLA + + Sbjct: 327 YENVGDPQAADVDASLDRARQMREANDDLEDADFD-PFYIVKSDGSTLYGTRDLATIEYR 385 Query: 345 YER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403 E D +YV+ ++ + Y ++L A + ++ + L+ L MS R Sbjct: 386 IEEYDADQSVYVVANEQNQYFQQLFVAARKMGYNDIKLKHIDYGLISLPEG----SMSTR 441 Query: 404 AGDFITLRHVVD--------------------------EVGSDSVRFMMLWRKNSELLDF 437 G IT R V+D ++ ++++ M+ K F Sbjct: 442 KGQIITAREVLDRAQDRAEEIIAEKGRIDDAEAQSVATKIALATIKYEMVAAKRERDTTF 501 Query: 438 DFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 D + V + P YVQYA R SI A D P++D DL P S F+ +++ Sbjct: 502 DIDESVALEGDTGP--YVQYAATRGYSILDGA-DAAPEID-DLDP-------SVFNDTDV 550 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ LA YP V+E + LA YL LA VF+ + + + A N + Sbjct: 551 ELLFELARYPLVLERCEERYDAAPLAHYLLQLAHVFNSFYH------KNAVLDAENARTE 604 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L A I ++GL ++G++ EM Sbjct: 605 --RLLLTKATTQIFDNGLGLLGIDVLEEM 631 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%) Query: 77 DVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGP 135 +V++V + G G IN + + L LS+I+ G EYG + + S N P Sbjct: 79 EVEAVTVEG-GHINYHADTTDLADATLSTILRDGSEYGTRTDADPDTILADVSSPNIAKP 137 Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 +HVGH R ++ D + +++ G++VTR+ ++ D G Q L Sbjct: 138 LHVGHLRNTILSDAVMNILEARGHDVTRDNHLGDWGVQFGNL 179 >gi|297192854|ref|ZP_06910252.1| arginyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486] gi|297151518|gb|EFH31212.1| arginyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486] Length = 587 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 70/136 (51%), Gaps = 7/136 (5%) Query: 45 LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104 N + L++ LG +P +A +V I + + + ++G GF+N+ ++ + + L++ Sbjct: 41 FQANGILALAKKLGGNPRELAAKVVDAIGPNDVLGDIEVSGPGFLNITITDKAITETLAA 100 Query: 105 IVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161 G+ + G GT V I++ N MHVGH R AV+GD + ++ F+G +V Sbjct: 101 RAADDRLGVPFA---AGSGTTV-IDYAQPNVAKEMHVGHLRSAVIGDAMVQILEFTGEKV 156 Query: 162 TREYYINDAGAQINTL 177 R ++I D G Q L Sbjct: 157 VRRHHIGDWGTQFGML 172 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 76/297 (25%), Positives = 127/297 (42%), Gaps = 53/297 (17%) Query: 323 PLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 PL+ KS+G Y Y A DL+ + + + G + ++YV+ + S + K + A Sbjct: 310 PLIVKKSNGGYGYAATDLSAIRDRVQNLGANTLVYVVDARQSLHFKMVFETARRAGWLND 369 Query: 380 QIN-VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 ++ V L L +DG P K R G+ + L ++DE Sbjct: 370 KVKAVQLAFGTVLGKDGKPFKT--REGETVRLVDLLDEAIDRATAVVREKAEKVGLSEQE 427 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 VG +V++ L FD ++ + + V Y+QYAYAR +SI R+A Sbjct: 428 IVENGRYVGVGAVKYADLSTSAVRDYKFDLDQMVSLNGDTSV-YLQYAYARIQSIKRKAG 486 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 D P V E E +E L +HL ++ V+ + EP+KLA YLY LA Sbjct: 487 DRRP----------VAHPELELAPAERALGLHLDQFGEVLAEVASSYEPHKLAAYLYQLA 536 Query: 530 SVFHGHWSHGRENPRLRFVQANN-RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 S + + + A+N ++ RL LV ++ G+ ++G+ +P + Sbjct: 537 SHLTTFYD------QCHVLSADNPAEVVENRLFLVDLTGRTLHQGMALLGIRTPERL 587 >gi|217959719|ref|YP_002338271.1| arginyl-tRNA synthetase [Bacillus cereus AH187] gi|222095806|ref|YP_002529863.1| arginyl-tRNA synthetase [Bacillus cereus Q1] gi|217066344|gb|ACJ80594.1| arginyl-tRNA synthetase [Bacillus cereus AH187] gi|221239864|gb|ACM12574.1| arginine--tRNA ligase (arginyl-tRNA synthetase) [Bacillus cereus Q1] Length = 562 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 83/300 (27%), Positives = 125/300 (41%), Gaps = 77/300 (25%) Query: 326 KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 KSDG+ Y DL A + GFD +YV+G + S + Q + Sbjct: 300 KSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQSLHFN--------------QFFTV 345 Query: 385 LCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE----------------- 416 L +L + DGM P KMS R G I L V++E Sbjct: 346 LKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPNLK 405 Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIF 465 VG +V F L KN + + +F +K + + P YVQY +AR SI Sbjct: 406 QKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSIL 461 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 R+ F F L D ++ L ++P+VIE A EP ++ Y+ Sbjct: 462 RKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEIAFNKNEPSVISKYV 510 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 D+A F+ ++ + +R + N K + RL LV+AV ++ GL ++GVE+P EM Sbjct: 511 LDVAQSFNKYYGN------VRILNENAEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 562 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ + L I +++ILD +IE P+ G + L++ P IA Sbjct: 2 DYKKQFAESLSNIFTNELTQQQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V G ++N++ + + +L +I+ EYG N G V Sbjct: 59 KEVAQKLS-DPFFAKVEAVGP-YVNVFFNRETVSDTVLKTILAEKEEYGHNHFGYEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|157412544|ref|YP_001483410.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215] gi|157387119|gb|ABV49824.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215] Length = 604 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 147/659 (22%), Positives = 259/659 (39%), Gaps = 138/659 (20%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L F L + L++ D K + E IL + +I + G N + LS+ +P Sbjct: 8 LTKQFEQSLLDSLEKNDKKGEFE--ILRKNLITQSSKEEFGDYQCNVCLSLSKIYKKNPR 65 Query: 63 TIAE----LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI- 117 I+ L+ I S+ IAG GFIN+ L + +L + + + I+ R I Sbjct: 66 DISNDFINLLNKNKSISKLCKSLEIAGPGFINIKLKDA----VLINEIKANIQCNRAGIP 121 Query: 118 --------GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169 G KV ++F S N MHVGH R ++GD+++ + GYEV R ++ D Sbjct: 122 LIKKDLDSGLSNKVIVDFSSPNIAKEMHVGHLRSTIIGDSISRIFELRGYEVLRLNHVGD 181 Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK----ELADKYSSELLNFP 225 G Q L + + LY+ND L+ +GK +L + Y F Sbjct: 182 WGTQFGMLITQL-----KDLYSND------------LEEIGKIKISDLVEFYKESKKRFD 224 Query: 226 EEKWLPIVKDYSVQAMMKIIRDDLKALN---------------IQHDIFISEDDFHRGDP 270 E + S + ++K+ D+K++ I ++ I ++ Sbjct: 225 NESEF---QKRSREEVVKLQSGDIKSIKAWKLLCDQSRKEFDEIYKNLKIKIEERGESFY 281 Query: 271 SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL----L 325 +P ++ +ID+L + + E KC +F M + +PL Sbjct: 282 NPFLKSLIDDLNLKKILVED--------QGAKC-------VFLDGMTNKE-GKPLPLIIQ 325 Query: 326 KSDGSYTYFAADLAYFKCKYER---GFD--NMIYVMG---SDHSGYVKRLEAVAAAVSEK 377 K DG + Y DLA + ++ + G D +IYV ++H V ++ A + E Sbjct: 326 KKDGGFNYATTDLAAIRYRFNQPPNGDDASRIIYVTDHGQANHFAGVFQVAKKAKWIPEN 385 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416 + Q++ + LV+ DG +K R G+ I L+ +++E Sbjct: 386 R-QVDHVPFGLVQGI-DGKKLKT--REGETIRLKDLLNEAVRRAKEDLLKRLKDEDRYET 441 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466 +G +V++ L + F F K+ + N Y+ Y R I R Sbjct: 442 EEFIANTSRIIGLGAVKYADLSQNRITNYQFSFDKMLSLNG-NTAPYLLYTLVRILGIKR 500 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 + ++ D I E + SE +LI L ++ VI + P +L YL+ Sbjct: 501 KNDFVYDSKDL-----QYINYEHK---SEWKLIRKLLKFDEVIISIEKDLMPNRLCNYLF 552 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +L F+ + + P L+ + + + RL L A + L ++G+E+ M Sbjct: 553 ELCQTFNRFYD---QVPILK----EEKYIKISRLNLCDLTAKTLKLSLELLGIETLERM 604 >gi|229109648|ref|ZP_04239234.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock1-15] gi|228673689|gb|EEL28947.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock1-15] Length = 562 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 81/302 (26%), Positives = 127/302 (42%), Gaps = 81/302 (26%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG+ Y DL Y + Y GFD +YV+G + S + Q Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343 Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416 +L +L + DGM P KMS R G I L V++E Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463 VG ++ F L KN + + +F +K + + P YVQY +AR S Sbjct: 404 LKQKEVVAKQVGVGAIIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ F F L D ++ L ++P++IE A EP ++ Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIEAAFNKNEPSIISK 508 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+ D+A F+ ++ + +R ++ + K + RL LV+AV ++ GL ++GVE+P Sbjct: 509 YILDVAQSFNKYYGN------VRILEESKEKDS--RLALVYAVTVVLKEGLRLLGVEAPE 560 Query: 584 EM 585 EM Sbjct: 561 EM 562 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ + L I +K+ILD +IE P+ G + L++ P IA Sbjct: 2 DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + + DP V G ++N++ + + +L +++ E+G+N G V Sbjct: 59 KEVAEKFN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|145481811|ref|XP_001426928.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124394006|emb|CAK59530.1| unnamed protein product [Paramecium tetraurelia] Length = 600 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 125/586 (21%), Positives = 229/586 (39%), Gaps = 133/586 (22%) Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 + +A+ I A D + V KGF+ + L+ ++ ++SI+ +G+++ + K Sbjct: 76 VEVAQKIAATEGQDNVIQKVEAIEKGFLTIQLNNQFIEDEINSILANGLKFP---LEKKQ 132 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 KV +++ S N MHVGH R ++G++L ++ F G EV R ++ D G Q L + Sbjct: 133 KVVVDYSSPNIAKEMHVGHLRSTILGESLCRILEFQGQEVVRVNHVGDWGTQFGMLINHL 192 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 Y N P + KEL D Y F +++ +++ Sbjct: 193 LEEYPDYQTNK---------PAL------KELEDLYKEAKKKFDSN------EEFKLKSQ 231 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR--DIIDNLARQGY--VY---------- 287 +++ L+AL DP I +I +L+RQ Y +Y Sbjct: 232 QFVVK--LQAL----------------DPVCIDAWKMICDLSRQEYNKIYQRLNVKITEY 273 Query: 288 -EGILPPPKSKTTQKC------DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340 E P ++ ++C ++D+ + R + G+ V ++K DG Y Y D+A Sbjct: 274 GESYYNPILNEIVKECEAKGIVELDQGAKIIR--VKGEKVPLMIVKKDGGYNYDTTDMAA 331 Query: 341 FKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK---AQINVLLCELVRLYRDGM 396 K + E D ++Y+ + K + A + + + + LV L DG Sbjct: 332 AKTRILEWKCDRLLYLTDVGQWNHFKLVFEGAKLMGWHQPPNTSMEHMGFGLV-LGPDGK 390 Query: 397 PIKMSKRAGDFITLRHVVDE---------------------------------------V 417 K R+GD + L ++DE + Sbjct: 391 --KFKTRSGDTVKLIDLLDEAKERALKQIQLRVQENQQGKEFSTGTALSPEEFETAAERM 448 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G ++++ L + +FD+ K+ + K N Y+ Y+Y R SI R++ DF Sbjct: 449 GIAAIKYYDLKQNRISDYNFDYDKMLD-PKGNTAVYLMYSYVRMLSILRKS----GIQDF 503 Query: 478 DLFPRNVIPQESEFDTS---ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 ++F E +F + E L L + V+++ T L Y+YD+ Sbjct: 504 EVFKG-----EHKFKITHQHERHLAAQLLRFVDVLQSVTDQLAINWLCDYIYDICVKIAE 558 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 ++ R N + T RL L AV ++ +++G+E Sbjct: 559 AYNQYR---------ILNDEHTQTRLLLCEAVKMVLLQSFHLVGIE 595 >gi|307327898|ref|ZP_07607080.1| Arginine--tRNA ligase [Streptomyces violaceusniger Tu 4113] gi|306886416|gb|EFN17420.1| Arginine--tRNA ligase [Streptomyces violaceusniger Tu 4113] Length = 341 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 21/187 (11%) Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467 ++ R ++ +G D+ R+ +L +L D D + Q ++N +F VQYA+AR R++ R Sbjct: 167 VSGRDLLTRLGPDAARWALLRPAGHDLPDLDPAHLLSQREDNALFRVQYAHARTRALMRN 226 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE---------YPRVIENATIAQEP 518 A F + P PQ SE + H AE +PR IE A + P Sbjct: 227 AS------QFGIVPE---PQSDSGSDSEPGMYGHPAEAALLALLADHPRTIEAAARHRAP 277 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 +LA L +A F + P L + + RL L A +++ GL+++G Sbjct: 278 DRLARQLVAVADGF---FRFHDACPALPAGECKPSAVHRSRLALADAAGAVLAGGLHLLG 334 Query: 579 VESPNEM 585 + +P + Sbjct: 335 ISAPEHL 341 Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 4/102 (3%) Query: 28 ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD----PLTIAELIVARIKIDPDVDSVFI 83 + +R+ + P G +TN A++L+ G L IAE++ R+ +DP + V I Sbjct: 27 VPERVKVRIPPRPGCGDYATNVALLLASGSGDGGDGDALGIAEVLRRRLVLDPGIARVDI 86 Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 AG GF+N+ L + +++ +++ G+ YG G V + Sbjct: 87 AGPGFLNITLEGTSHAQLVRAVLSQGLRYGHGDALAGVSVPL 128 >gi|33860747|ref|NP_892308.1| arginyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|39932084|sp|Q7V396|SYR_PROMP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|33633689|emb|CAE18646.1| Arginyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 603 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 109/405 (26%), Positives = 172/405 (42%), Gaps = 62/405 (15%) Query: 43 GHLSTNAAMILSRPLGLDPLTIA----ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98 G N ++LS+ +P IA E + KI +++ IAG GFIN+ L L Sbjct: 46 GDYQCNICLVLSKIYKSNPREIAIAFIETLKENKKISNLCENLEIAGPGFINIKLKNKVL 105 Query: 99 RKILSSIVV---SGIEYG-RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154 + + S + +G+ +N I KV ++F S N MHVGH R ++GD+++ + Sbjct: 106 IEAIKSNIKCPRAGVPLSHKNNIYSKKKVIVDFSSPNIAKEMHVGHLRSTIIGDSISKIF 165 Query: 155 AFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND----SDLPEGYYPGVYLKHVG 210 F GY V R +I D G Q L + Y L D SDL E Y Sbjct: 166 EFRGYIVLRLNHIGDWGTQFGMLITQLKDLYSSDLKEIDRIKISDLVEFYKASKKRFDNE 225 Query: 211 KELADKYSSELLNFPE------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 E + E++ E W ++ + S + +I K LNI+ I E Sbjct: 226 TEFQKRSREEVVQLQSGDKKSIEAW-KLLCNQSRKEFDQI----YKTLNIK----IKE-- 274 Query: 265 FHRGDP--SP-IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 RG+ +P ++ II++L Y+ IL + KC +F M + + Sbjct: 275 --RGESFYNPFLKSIIEDLN-----YKKILIEDQG---AKC-------VFLDGMTNKEGN 317 Query: 322 -RPLL--KSDGSYTYFAADLAYFKCKYERG--FDN---MIYVMGSDHSGYVKRLEAVAAA 373 PL+ K DG + Y DLA + ++ + DN +IYV S + + VA Sbjct: 318 PLPLIIQKKDGGFNYATTDLAALRYRFTKEPYGDNAARIIYVTDHGQSNHFAGVFQVAKR 377 Query: 374 VS--EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 + K ++N + LV+ DG K+ R GD I L+ ++ E Sbjct: 378 ANWIPKDCEVNHVPFGLVQGI-DGK--KLKTREGDTIKLKDLLSE 419 >gi|197106356|ref|YP_002131733.1| arginyl-tRNA synthetase [Phenylobacterium zucineum HLK1] gi|238690131|sp|B4R8T9|SYR_PHEZH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|196479776|gb|ACG79304.1| arginyl-tRNA synthetase [Phenylobacterium zucineum HLK1] Length = 593 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 135/600 (22%), Positives = 230/600 (38%), Gaps = 104/600 (17%) Query: 45 LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104 +N A+ ++ +G +P IA + R++ DP + SV IAG GF+NL ++ + L + Sbjct: 39 FQSNGALAAAKRVGKNPREIATAVAGRLQGDPRLASVEIAGPGFLNLKVADAALAARADA 98 Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164 I G + +V +++ N PMHVGH R +++G+++ L F G V + Sbjct: 99 IAAD-PRAGAGTVPAPRRVIVDYGGPNVAKPMHVGHLRASIIGESVKRLYRFRGDTVIGD 157 Query: 165 YYINDAGAQINTLALSVFWRYQQ--ALYN--NDSDLPEGYYPGVYLKHVGKELADKYSSE 220 + D G Q+ L +V + AL + N S P G P + + +L Y Sbjct: 158 AHFGDWGYQMGLLIGAVCDEDAEIRALVDQLNASGDPNGEIPAAFERVTLADLDRLYP-- 215 Query: 221 LLNFPEEKWLPIVKDYS------VQA-------MMKIIRD--------DLKALNIQHDIF 259 L + K P +D + +QA + + RD D AL + D + Sbjct: 216 -LAAAKGKEDPAYRDRARKLTADLQAHKPGCYLLWRRFRDVTQVALERDFHALGVDFDWW 274 Query: 260 ISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD 319 E D I+ ++ LA +G + + D+ + R GD Sbjct: 275 KGESDVDH----LIQPMVAELADKGLLVD----------------DQGARIVRVAREGDK 314 Query: 320 VDRP---LLKSDGSYTYFAADLAYFKCKYERGFDNMIYV-----MGSDHSGYVKRLEAVA 371 + P ++ S+GS Y DLA +R FD + + +DH V R +A Sbjct: 315 RELPPLLVVSSEGSAMYGTTDLATI-LDRKREFDPQLVIYCVDQRQADHFEIVFRAAYLA 373 Query: 372 AAVSE-------------------KKAQINVL-LCELVRLYRDGMPIKMSKRA-GDFITL 410 E K + VL L +L+ + R ++ + G+ + Sbjct: 374 GYAEEGQLEHIGFGTMNGTDGKPFKTREGGVLKLADLIEMTRSKARERLHEAGLGEDLPA 433 Query: 411 RHVVDEVGSDSVRFMML-----WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 D G +V + +R S + D D E K P Y+ Y R +S+ Sbjct: 434 EEFEDIAGKVAVAALKFADLSNFRGTSYVFDLDRFTSFE-GKTGP--YLLYQAVRVKSLL 490 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 R+A+ P V + +E L++ L + ++ A + P LA + Sbjct: 491 RKAEAEGAQAG----PVTVA------EPAERDLVLTLDAFETALQEAYDKKAPNALAEHA 540 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 Y L+ F ++ P L A + RL L A + L+I+G+ P M Sbjct: 541 YRLSQAFSKFYA---ACPIL----AAPPPVRGSRLTLAQATLRQLELALDILGIAVPERM 593 >gi|126466471|ref|YP_001041580.1| DALR anticodon binding domain-containing protein [Staphylothermus marinus F1] gi|126015294|gb|ABN70672.1| DALR anticodon binding domain protein [Staphylothermus marinus F1] Length = 770 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 1/93 (1%) Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGR-NLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 G+IN Y+ + ++ I+ +S + + GKG K+ +E SANP P+HVG R AV Sbjct: 101 GYINFYIDYNLMKDIIFENYLSKKIFDQIKSFGKGEKIVVEHTSANPVHPLHVGSGRNAV 160 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 +G+T A+L+ + G+ V +Y+ND G Q+ L Sbjct: 161 IGNTYANLLRYLGFNVEERFYVNDMGRQVAVLV 193 >gi|47570082|ref|ZP_00240741.1| arginyl-tRNA synthetase [Bacillus cereus G9241] gi|47553243|gb|EAL11635.1| arginyl-tRNA synthetase [Bacillus cereus G9241] Length = 562 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 85/312 (27%), Positives = 132/312 (42%), Gaps = 79/312 (25%) Query: 316 VGDDVDRPLL--KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372 +G++ P L KSDG+ Y DL A + GFD +YV+G + S + Sbjct: 288 LGEEGMPPCLIRKSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQSLHFN------- 340 Query: 373 AVSEKKAQINVLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE----- 416 Q +L +L + DGM P KMS R G I L V++E Sbjct: 341 -------QFFTVLKKLGYTWGDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELA 393 Query: 417 --------------------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFY 453 VG +V F L KN + + +F +K + + P Y Sbjct: 394 KQNIEEKNPNLKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--Y 449 Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513 VQY +AR SI R+ F F L D ++ L ++P+VIE A Sbjct: 450 VQYTHARACSILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEIAF 498 Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573 EP ++ Y+ D+A F+ ++ + +R ++ + K + RL LV+AV ++ G Sbjct: 499 NKNEPSVISKYVLDVAQSFNKYYGN------VRILEESEEKDS--RLALVYAVTVVLKEG 550 Query: 574 LNIIGVESPNEM 585 L ++GVE+P EM Sbjct: 551 LRLLGVEAPEEM 562 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 6/155 (3%) Query: 24 VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83 +K+IL+ +IE P+ G + L++ P IA+ + ++ DP V Sbjct: 20 TQKQILE--LIESPKQDEFGD-AAFPCFSLAKQYKKAPAIIAKEVAQKLS-DPFFTKVEA 75 Query: 84 AGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 G ++N++ + + +L +I+ EYG N G V I++ S N P +GH R Sbjct: 76 VGP-YVNVFFNRETVSDTVLKTILAEKEEYGHNHFGCEKTVVIDYSSPNIAKPFSMGHLR 134 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 ++G++L + GYEV YI D G Q L Sbjct: 135 STMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|228907938|ref|ZP_04071789.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200] gi|228851697|gb|EEM96500.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200] Length = 562 Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 84/302 (27%), Positives = 130/302 (43%), Gaps = 81/302 (26%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG+ Y DL Y + Y GFD +YV+G + S + Q Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343 Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416 +L +L + DGM P KMS R G I L V++E Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463 VG +V F L KN + + +F +K + + P YVQY +AR S Sbjct: 404 LKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ F F L + + S ++L L ++P+VIE A EP ++ Sbjct: 460 ILRKESVEFETCTFAL--------KGDHSWSVVKL---LNKFPQVIEAAFNKNEPSIISK 508 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+ D+A F+ ++ + +R ++ + K + RL LV+AV ++ GL ++GVE+P Sbjct: 509 YVLDVAQSFNKYYGN------VRILEESEEKDS--RLALVYAVTVVLEEGLRLLGVEAPE 560 Query: 584 EM 585 EM Sbjct: 561 EM 562 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ + L I +K+ILD +IE P+ G + L++ P IA Sbjct: 2 DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V AG ++N++ + + +L +++ E+G+N G V Sbjct: 59 KEVAEKLN-DPFFTKV-EAGGPYVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|32473878|ref|NP_866872.1| arginyl-tRNA synthetase [Rhodopirellula baltica SH 1] gi|39932074|sp|Q7URC7|SYR_RHOBA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|32444414|emb|CAD74413.1| arginyl-tRNA synthetase [Rhodopirellula baltica SH 1] Length = 671 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 2/143 (1%) Query: 36 RPR-DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS 94 RP D G +NAAM L++ +G +A +V + + + +AG GFINL L Sbjct: 30 RPAADPKFGDYQSNAAMPLAKRVGKTSRDVAAELVQNLNVTDLFEEPEVAGPGFINLRLK 89 Query: 95 PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154 S L + +++ G + KV ++F S N PMHVGH R V+GD LA + Sbjct: 90 DSVLFDSIQQMLLDE-RVGVSKTTDPKKVIVDFSSPNVAKPMHVGHIRSTVIGDCLARTL 148 Query: 155 AFSGYEVTREYYINDAGAQINTL 177 F G +V + ++ D G Q + Sbjct: 149 RFYGEDVVTDNHLGDWGTQFGII 171 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 68/303 (22%), Positives = 121/303 (39%), Gaps = 48/303 (15%) Query: 321 DRPLL--KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 D P++ K DG++ Y DLA + + E D ++YV+ S + K+ A+A + Sbjct: 379 DSPMIIQKRDGAFLYATTDLATLQYRRDEFQPDEILYVVDSRQGEHFKKFFAMAEPLGMA 438 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416 + Q+ V + L DG P+K R+G I L ++++ Sbjct: 439 EVQL-VHVNFGTVLGPDGRPMKT--RSGSLIGLESLLNDAVSRAKEVVCNPDRLATMDPP 495 Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 VG ++++ L + FD K+ + N YVQY+YAR +SI Sbjct: 496 MGGEEQQQIAEIVGIGAIKYADLSHHRTSDYKFDVDKMVAL-EGNTATYVQYSYARTQSI 554 Query: 465 FRQAKD--IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 R+A D P + + + +E L + L + IE + P L Sbjct: 555 LRRASDGEGLPAFEQAIEQAAATQPMTFTHPNERSLALMLMRFEEAIEQVRLNYAPNALC 614 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 YL++ A + N R + ++ + RL LV ++ GL+++G++ Sbjct: 615 DYLFETAKTYSSF------NESCRVLGNDDPAVMQTRLALVVLTGRVLKKGLSLLGIDVA 668 Query: 583 NEM 585 M Sbjct: 669 ERM 671 >gi|332982126|ref|YP_004463567.1| arginine--tRNA ligase [Mahella australiensis 50-1 BON] gi|332699804|gb|AEE96745.1| Arginine--tRNA ligase [Mahella australiensis 50-1 BON] Length = 449 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 62/192 (32%), Positives = 91/192 (47%), Gaps = 28/192 (14%) Query: 18 IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD 77 I C+ E K+ + RD +G TN + + R IA ++ I Sbjct: 29 ITCRNAYEVKV------NKTRDIKYGDFYTNMPIEMVRLTARPSDYIARTLLEHADISGT 82 Query: 78 -VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 +D + IAG GFIN++L P + +L+ I+ EYGR IG KV I F P M Sbjct: 83 YIDRMEIAGSGFINIFLKPKWFYDVLTLILKERDEYGRVDIGDNRKVLIGF----PDIDM 138 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA--QIN--TLALSVF------WRYQ 186 + V GD +A+++ +GYEV RE Y+N + +IN + L ++ W Y+ Sbjct: 139 Y-----SIVWGDCVANILETAGYEVLRECYVNSHKSMREINDEIVNLRLYGVVLSSWFYE 193 Query: 187 QALYNNDSDLPE 198 Q LY DSDL E Sbjct: 194 QQLY--DSDLQE 203 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 54/272 (19%) Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 D L+ +G +T A +AY++ K ++ G+D +I +G A A Sbjct: 226 DTHGALILKEGRFTNIAMRMAYYRRKIFKEGYD-LIIEIGD---------RASADTFETV 275 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDF 437 + + L CEL + P D+ H+++ +G D++RF++ Sbjct: 276 REAMICLGCELEHMEYLVSP--------DY---SHLLENIGRDALRFLL----------- 313 Query: 438 DFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT---- 493 +++ ++ +F VQYAYAR SI R P+ L P P+E +F Sbjct: 314 --SSSRDKEDDDSLFEVQYAYARICSILRHMD---PN-RLALMP----PEEIDFSMLRHP 363 Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553 +E L+ L + P + A ++P L YL D+A +FH + R V+ NN Sbjct: 364 AEQALMRCLPDLPHKVRLAAQCRQPAILTDYLVDVADLFHKFYDECR-------VRINNN 416 Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L RL L+ A ++ +GL I+ +++P + Sbjct: 417 DLMYARLGLLEAARVVLANGLYILNIDAPERL 448 >gi|41615001|ref|NP_963499.1| hypothetical protein NEQ208 [Nanoarchaeum equitans Kin4-M] gi|40068725|gb|AAR39060.1| NEQ208 [Nanoarchaeum equitans Kin4-M] Length = 537 Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 121/525 (23%), Positives = 209/525 (39%), Gaps = 115/525 (21%) Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +++ S N P HVG+ R A++G+ L +++ GY V + D G Q L Sbjct: 64 LDYFSPNIGKPPHVGNLRSAIIGNPLKNILRKVGYNVISINWWGDFGTQFGELI------ 117 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 Y ++ +L + P +KH+ EL ++ EL PE +K+Y+ Sbjct: 118 YAFKTKGDEKELRKN--P---IKHLF-ELYTWFNRELEKNPE------IKNYA------- 158 Query: 245 IRDDLKALN--IQHDIFISEDDFHRGDPSPIRDIIDNLARQ---------------GYVY 287 R++ K L + I I F G P+ +++ N R+ Y+ Sbjct: 159 -REEFKYLEEAMYKGIQIDVSPFFEG--KPLSELLKNKTREEQNYILWKIFREITIKYMR 215 Query: 288 EGILPPPK---------SKTTQKCDMDRKQLLFRSTMVGDD----VDRP-----LLKSDG 329 E P K S +K K+LL + D V P LLKSDG Sbjct: 216 EQFYPKLKLEFDEESGESFFLKKAKEVAKELLEKGVAEEDKNSIIVRTPYGVALLLKSDG 275 Query: 330 SYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCE 387 + Y DLA YE+ FD IYV+ ++ S + +L +A + A ++ L Sbjct: 276 TTLYLTRDLAAAIEHYEKYKFDKKIYVVANEQSQHFNQLIYIAKKANYPFADKLYHLKFG 335 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------VGSD 420 L+ L + K S R G + ++++ +G Sbjct: 336 LLLLKTEEGVKKFSTRKGRAVFAEDILEKAYELAKEEILKRNKDKPLEEIEKNAKIIGYG 395 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +V + ++ + + FD+ K+ + + VF +QY+ R + I + Sbjct: 396 AVIYAIVRYDPKKDIIFDWDKILSLNGKTSVF-IQYSAVRAKHILDKY------------ 442 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 I + + + E +L++ L Y V+E + +P LA YLY+LA F+ + R Sbjct: 443 -NKPIERPNNLEKDEERLLLWLFYYYAVLEESARKLKPNILAEYLYNLAEEFNRFYEKNR 501 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V +NR+ R+ LV+ I+ GLN++G++ P M Sbjct: 502 -------VIGSNRE--KERVWLVNKTYQILKEGLNLLGIDVPTFM 537 >gi|327542711|gb|EGF29180.1| arginyl-tRNA synthetase [Rhodopirellula baltica WH47] Length = 671 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 2/143 (1%) Query: 36 RPR-DCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS 94 RP D G +NAAM L++ +G +A +V + + + +AG GFINL L Sbjct: 30 RPAADPKFGDYQSNAAMPLAKRVGKTSRDVAAELVQNLNVTDLFEEPEVAGPGFINLRLK 89 Query: 95 PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154 S L + +++ G + KV ++F S N PMHVGH R V+GD LA + Sbjct: 90 DSVLFDSIQQMLLDE-RVGVSKTTDPKKVIVDFSSPNVAKPMHVGHIRSTVIGDCLARTL 148 Query: 155 AFSGYEVTREYYINDAGAQINTL 177 F G +V + ++ D G Q + Sbjct: 149 RFYGEDVVTDNHLGDWGTQFGII 171 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 68/303 (22%), Positives = 121/303 (39%), Gaps = 48/303 (15%) Query: 321 DRPLL--KSDGSYTYFAADLAYFKCKYERGF-DNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 D P++ K DG++ Y DLA + + + D ++YV+ S + K+ A+A + Sbjct: 379 DSPMIIQKRDGAFLYATTDLATLQYRRDEFHPDEILYVVDSRQGEHFKKFFAMAEPLGMG 438 Query: 378 KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------------- 416 + Q+ V + L DG P+K R+G I L ++++ Sbjct: 439 EVQL-VHVNFGTVLGPDGRPMKT--RSGSLIGLESLLNDAVSRAKEVVCNPDRLATMDPP 495 Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 VG ++++ L + FD K+ + N YVQY+YAR +SI Sbjct: 496 MGGEEQQQIAEIVGIGAIKYADLSHHRTSDYKFDVDKMVAL-EGNTATYVQYSYARTQSI 554 Query: 465 FRQAKD--IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 R+A D P + L + +E L + L + IE + P L Sbjct: 555 LRRASDGEGLPTFEQALEQAAATQPMTFTHPNERSLALMLMRFEEAIEQVRLNYAPNALC 614 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 YL++ A + N R + ++ + RL LV ++ GL+++G++ Sbjct: 615 DYLFETAKTYSSF------NESCRVLGNDDPAVMQTRLALVVLTGRVLKKGLSLLGIDVA 668 Query: 583 NEM 585 M Sbjct: 669 ERM 671 >gi|229079375|ref|ZP_04211917.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock4-2] gi|228703908|gb|EEL56352.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock4-2] Length = 562 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 82/302 (27%), Positives = 126/302 (41%), Gaps = 81/302 (26%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG+ Y DL Y + Y GFD +YV+G + S + Q Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343 Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416 +L +L + DGM P KMS R G I L V++E Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463 VG +V F L KN + + +F +K + + P YVQY +AR S Sbjct: 404 LKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ F F L D ++ L ++P++IE A EP ++ Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIEAAFNKNEPSIISK 508 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+ D+A F+ ++ + +R ++ + K RL LV+AV ++ GL ++GVE+P Sbjct: 509 YILDVAQSFNKYYGN------VRILEESKEKDG--RLALVYAVTVVLKEGLRLLGVEAPE 560 Query: 584 EM 585 EM Sbjct: 561 EM 562 Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ + L I +K+ILD +IE P+ G + L++ P IA Sbjct: 2 DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ +P V G ++N++ + + +L +++ E+G+N G V Sbjct: 59 KEVAEKLN-NPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|229127604|ref|ZP_04256593.1| Arginyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4] gi|228655681|gb|EEL11530.1| Arginyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4] Length = 562 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 81/302 (26%), Positives = 127/302 (42%), Gaps = 81/302 (26%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG+ Y DL Y + Y GFD +YV+G + S + Q Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343 Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416 +L +L + DGM P KMS R G I L V++E Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463 VG +V F L KN + + +F +K + + P YVQY +AR S Sbjct: 404 LKQKEVVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ F F L D ++ L ++P++IE A EP ++ Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIEAAFNKNEPSIISK 508 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+ D+A F+ ++ + +R ++ + K + R+ LV+AV ++ GL ++GVE+P Sbjct: 509 YILDVAQSFNKYYGN------VRILEESKEKDS--RIALVYAVTVVLKEGLRLLGVEAPE 560 Query: 584 EM 585 EM Sbjct: 561 EM 562 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ + L I +K+ILD +IE P+ G + L++ P IA Sbjct: 2 DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + + DP V G ++N++ + + +L +++ E+G+N G V Sbjct: 59 KEVAEKFN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|157820403|ref|NP_001100113.1| probable arginyl-tRNA synthetase, mitochondrial [Rattus norvegicus] gi|149045596|gb|EDL98596.1| arginyl-tRNA synthetase-like (predicted) [Rattus norvegicus] gi|165971667|gb|AAI58745.1| Arginyl-tRNA synthetase 2, mitochondrial [Rattus norvegicus] Length = 578 Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 138/572 (24%), Positives = 237/572 (41%), Gaps = 109/572 (19%) Query: 59 LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYG---- 113 LD A+ + ++K D V ++ AG +N ++ + L K +L + G +YG Sbjct: 59 LDTQDQAQRLAEKLKCDTVVTAI-SAGPRTLNFKINRALLTKAVLQQVTEDGSKYGLKSE 117 Query: 114 --RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 +L K ++ +EF S N HVGH R ++G+ +A+L G++VTR YI D G Sbjct: 118 LFSDLPQK--RIVVEFSSPNIAKKFHVGHLRSTIIGNFIANLKEALGHQVTRINYIGDWG 175 Query: 172 AQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-----KYSSEL---L 222 Q L + Y++ L N P + VY++ V KE D K + E L Sbjct: 176 MQFGLLGTGFQLFGYEEKLQAN----PLQHLFDVYVQ-VNKEATDDKNVTKLAHEFFHRL 230 Query: 223 NFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279 + + L + +D S++ +I K L I D + S + F+R + ++D+ Sbjct: 231 ELGDTQALALWQRFRDLSIEEYTQIY----KRLGIYFDEY-SGESFYREKSQDVLKLLDS 285 Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339 +G+L +K D+ L V ++SDG+ Y DLA Sbjct: 286 --------KGLLQKT-AKGNVVVDVSETGDLSSVCTV--------MRSDGTSLYATRDLA 328 Query: 340 ---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396 + K KY FD MIYV + +++ + + + A+ C+ V G+ Sbjct: 329 AAIHRKDKY--NFDTMIYVADKGQKRHFQQVFQMLKIMGHEWAE----RCQHVPF---GI 379 Query: 397 PIKMSKRAGDFITLRHVVDEVGS---------DSVRFMMLWRKNSE-------------- 433 M R G+ L V++EV S + + M R+ +E Sbjct: 380 VKGMKTRRGEVTFLEDVLNEVQSRMLQNMASIKTTKKMENPRETAEKVGLAALIIQDFRG 439 Query: 434 --LLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490 L D+ F + QS+ + ++QY +AR S+ ++ F + F NV + Sbjct: 440 LLLSDYQFSWDRVFQSRGDTGVFLQYTHARLCSL----EETFGCGYLNDF--NVACLQEP 493 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD---LASVFHGHWSHGRENPRLRF 547 S LQ HL + V+ A+ +P + YL LA+V H Sbjct: 494 QSVSILQ---HLLRFDEVLYTASQDLQPKHIVSYLLTLSHLAAVAHKTLQ---------- 540 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 V+ + ++ RL L AV S++ +G+ ++G+ Sbjct: 541 VKDSPPEVAGARLHLFKAVRSVLANGMKLLGI 572 >gi|168014459|ref|XP_001759769.1| predicted protein [Physcomitrella patens subsp. patens] gi|162688899|gb|EDQ75273.1| predicted protein [Physcomitrella patens subsp. patens] Length = 606 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 3/106 (2%) Query: 78 VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI-EYGRNLIGKGTKVNIEFVSANPTGPM 136 DSV +AG GF+N+ LS ++ K L ++ G+ E+ L K +V ++F S N M Sbjct: 103 TDSVSVAGPGFVNIKLSDRWIEKKLHQLLSHGVGEWAPALSYK--RVVVDFSSPNIAKEM 160 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 HVGH R ++GD+L ++ + G EV R ++ D G Q L +F Sbjct: 161 HVGHLRSTIIGDSLCRMLEYCGVEVLRRNHVGDWGTQFGMLIEYLF 206 >gi|296502777|ref|YP_003664477.1| arginyl-tRNA synthetase [Bacillus thuringiensis BMB171] gi|296323829|gb|ADH06757.1| arginyl-tRNA synthetase [Bacillus thuringiensis BMB171] Length = 562 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 81/302 (26%), Positives = 127/302 (42%), Gaps = 81/302 (26%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG+ Y DL Y + Y GFD +YV+G + S + Q Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343 Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416 +L +L + DGM P KMS R G I L V++E Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463 VG +V F L KN + + +F +K + + P YVQY +AR S Sbjct: 404 LKQKEVVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ F F L D ++ L ++P++IE A EP ++ Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIEAAFNKNEPSIISK 508 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+ D+A F+ ++ + +R ++ + K + R+ LV+AV ++ GL ++GVE+P Sbjct: 509 YILDVAQSFNKYYGN------VRILEESKEKDS--RIALVYAVTVVLKEGLRLLGVEAPE 560 Query: 584 EM 585 EM Sbjct: 561 EM 562 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 6/155 (3%) Query: 24 VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83 +K+ILD +IE P+ G + L++ P IA+ + + DP V Sbjct: 20 TQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIAKEVAEKFN-DPFFTKVEA 75 Query: 84 AGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 G ++N++ + + +L +++ E+G+N G V I++ S N P +GH R Sbjct: 76 VGP-YVNVFFNRETVSDAVLKTVLGEKEEFGQNHFGCEKTVVIDYSSPNIAKPFSMGHLR 134 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 ++G++L + GYEV YI D G Q L Sbjct: 135 STMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|229155777|ref|ZP_04283883.1| Arginyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342] gi|228627763|gb|EEK84484.1| Arginyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342] Length = 562 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 82/300 (27%), Positives = 126/300 (42%), Gaps = 77/300 (25%) Query: 326 KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 KSDG+ Y DL A + GFD +YV+G + S + Q + Sbjct: 300 KSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQSLHFN--------------QFFTV 345 Query: 385 LCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE----------------- 416 L +L + DGM P KMS R G I L V++E Sbjct: 346 LKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPNLK 405 Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIF 465 VG +V F L KN + + +F +K + + P YVQY +AR SI Sbjct: 406 QKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSIL 461 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 R+ F F L D ++ L ++P+VIE A EP ++ Y+ Sbjct: 462 RKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEIAFNKNEPSVISKYV 510 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 D+A F+ ++ + +R ++ + K + RL LV+AV ++ GL ++GVE+P EM Sbjct: 511 LDVAQSFNKYYGN------VRILEESEEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 562 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ L I +K+ILD +IE P+ G + L++ P IA Sbjct: 2 DYKMHFAESLSNIFTNELTQKQILD--LIESPKQDEFGD-AAFPCFSLAKQYKKAPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V G ++N++ + + +L +I+ EYG N G V Sbjct: 59 KEVAQKLS-DPFFTKVEAVGP-YVNVFFNRETVSDTVLKTILAEKEEYGHNHFGYEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|317123532|ref|YP_004097644.1| arginyl-tRNA synthetase [Intrasporangium calvum DSM 43043] gi|315587620|gb|ADU46917.1| arginyl-tRNA synthetase [Intrasporangium calvum DSM 43043] Length = 586 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 12/138 (8%) Query: 45 LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104 + NAA+ L + +G P +A IVA + +D + V ++G GF+N+ S ++L +L+ Sbjct: 39 VQVNAALALGKKVGAAPRDVAARIVAALDLDGVAEKVEVSGPGFVNITFSDAWLASLLAD 98 Query: 105 I-----VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 + + +E +N + I++ + N MHVGH R +VGD+LA + G+ Sbjct: 99 VDQDDRLGVPVEEPQN-------IPIDYSAPNVAKEMHVGHLRTTIVGDSLARTLEHLGH 151 Query: 160 EVTREYYINDAGAQINTL 177 V R+ +I D G L Sbjct: 152 HVIRQNHIGDWGTPFGML 169 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 75/292 (25%), Positives = 124/292 (42%), Gaps = 45/292 (15%) Query: 323 PLL--KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAA------ 373 PL+ KSDG Y Y DLA K + + G ++YV+G+ + ++ + A Sbjct: 311 PLIIRKSDGGYGYPTTDLATIKYRVGDLGAHRVLYVIGAPQALHLNMVWDTARLAGWLPD 370 Query: 374 -VSEKKAQINVLLCELVRLY--RDGMPIKMSKRAGDFIT-LRHVVDE------------- 416 V+ QI +L E ++ R G +++ + + R ++DE Sbjct: 371 DVTPVHIQIGNVLGEDRKILKTRSGSSLRLMALLDEAVAKARGLIDETRPDLSEEERATI 430 Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +V++ L ++ FD ++ + N Y+QY AR RSIFRQA Sbjct: 431 ARQVGIGAVKYADLSVAHNSEYVFDLDRMVSLTG-NTGPYLQYVVARVRSIFRQAG---- 485 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 L P + E L L + V+ EP++L YL++LA F Sbjct: 486 -----LDPLTQHAPITLGTPHERALGQQLLGFGDVVTEVGAEYEPHRLCGYLFELAQAFS 540 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + EN ++A +L RL L V + +GL+++G+ESP +M Sbjct: 541 AFY----EN--CPVLKAETPELRESRLTLSALVLRTMVTGLDLLGLESPEQM 586 >gi|182414382|ref|YP_001819448.1| arginyl-tRNA synthetase [Opitutus terrae PB90-1] gi|177841596|gb|ACB75848.1| arginyl-tRNA synthetase [Opitutus terrae PB90-1] Length = 590 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 2/144 (1%) Query: 36 RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLS 94 R D HG N + ++ +P +AE +VA + + V IAG GFIN L+ Sbjct: 34 RVADAQHGDYQANGVLGYAKSRKQNPRALAEKLVAALPAEFTQSTRVTIAGPGFINFTLA 93 Query: 95 PSYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 P L L + + + G G +++ S N MHVGH R AV+G+ + L Sbjct: 94 PGSLLAWLRTYATAEQLAAGAAADHAGQTWVVDYSSPNTAKQMHVGHLRSAVIGEAICRL 153 Query: 154 MAFSGYEVTREYYINDAGAQINTL 177 +AF+G V R+ ++ D G Q L Sbjct: 154 LAFTGARVIRDNHLGDWGTQFGKL 177 Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 7/120 (5%) Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R + + VG +V++ L + S F + K+ + N Y+ YA AR SIFR+A Sbjct: 430 RAIAEAVGVGAVQYADLSQNRSSNYVFSWEKMLSL-EGNTAPYLLYAVARIHSIFRKAGA 488 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 + P +E+ L L ++P + AT P+ L+ YL++LA Sbjct: 489 TPGE------PATESAATEPETPTEIALARKLLKFPDAVRLATETLRPHFLSLYLFELAG 542 >gi|2415551|emb|CAA04301.1| arginyl-tRNA synthetase [Campylobacter jejuni] Length = 97 Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats. Identities = 33/86 (38%), Positives = 54/86 (62%), Gaps = 1/86 (1%) Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143 A G++N +S ++L ++ + + + ++ + K + + +E+VSANPTGP+H+GH R Sbjct: 13 AVNGYLNFRISKTFLNELANQALTNPNDFTKGEKNKESFL-LEYVSANPTGPLHIGHARG 71 Query: 144 AVVGDTLASLMAFSGYEVTREYYIND 169 AV GDTL L GY+ EYY+ND Sbjct: 72 AVFGDTLTRLARHLGYKFNTEYYVND 97 >gi|320538434|ref|ZP_08038301.1| arginyl-tRNA synthetase [Treponema phagedenis F0421] gi|320144696|gb|EFW36445.1| arginyl-tRNA synthetase [Treponema phagedenis F0421] Length = 594 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 132/610 (21%), Positives = 250/610 (40%), Gaps = 115/610 (18%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP---DVDSVFIAGK 86 D+I +E P + G + ++ L P IA + A ++ +P D+ +V I G Sbjct: 34 DQITMEVPPNPEMGDVGF-PLFPFAKLLRAAPAKIAADVHALLQKNPALKDMGTVKIIGP 92 Query: 87 GFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 +IN++L + K L +++ G YG+ KG K+ +EF S N P+H+GH R Sbjct: 93 -YINVFLPKDKIAEKTLRAVIEQGKNYGKTESLKGKKIMVEFSSPNTNKPLHLGHLRNDA 151 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRYQQALYNNDSDLPE--GYY 201 +G++++ + F G +V + IND G I + LA F D PE G Sbjct: 152 IGESISRIFEFCGADVYKVNIINDRGVHICKSMLAYMKF---------ADGKTPESLGIK 202 Query: 202 PGVYLKHV----------GKELADKYSSELL------NFPE--EKWLPIVKDYSVQAMMK 243 P ++ + E A++ + ELL + PE E W + D+++Q Sbjct: 203 PDRFVGEMYVRFNTYSKENPEKAEQEAQELLRSWEAGDKPEVLELWRKM-NDWAIQG--- 258 Query: 244 IIRDDLKALNIQHD-IFISEDDFHRGDPSPIRDIIDNLAR-------QGYVYEGILPPPK 295 I+ + + D ++ + + +G ++++ LA+ G ++ + P Sbjct: 259 -IKQTYERTGVSFDKLYFESETYLKGR----EEVLEGLAKGLFYKEEDGSIWVDLSP--- 310 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354 +D+K LL+ DG+ Y D ++ + FD +IY Sbjct: 311 ------IKLDKKV---------------LLRGDGTALYITQDFGTAIFRHNDWPFDRLIY 349 Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQ---------IN-------------VLLCELVRLY 392 V+G++ + K L V + A+ +N V +L+ Sbjct: 350 VVGNEQEYHFKVLFYVLGLLGYDWAKNLYHLSYGMVNLPEGKMKSREGTIVDADDLINSL 409 Query: 393 RDG--MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS-KEN 449 RD I+ R+ + V +++ ++ + +L + S D F + S N Sbjct: 410 RDAALAEIEQKGRSEAVGDPKEVAEKIALAALHYFLL--QVSPKKDMLFNPQESLSFNGN 467 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 Y+QY AR SI ++A+ + + +V P + SE L+ + ++P+ + Sbjct: 468 TGPYLQYMGARITSILKKAET--EEGKQSISGGSVKPALLTHE-SEWTLLKTIEDFPQQV 524 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 A + + YLY+L+ F + + P + A N L + RL+L AV + Sbjct: 525 SRAADQYDSSIVTAYLYELSKNFSRFY---HDCP---ILSAGNADLAVTRLELARAVKIV 578 Query: 570 INSGLNIIGV 579 + + + ++ V Sbjct: 579 LENAVRLVLV 588 >gi|297526805|ref|YP_003668829.1| Arginine--tRNA ligase [Staphylothermus hellenicus DSM 12710] gi|297255721|gb|ADI31930.1| Arginine--tRNA ligase [Staphylothermus hellenicus DSM 12710] Length = 770 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 5/124 (4%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAG----KGFINLYLSPSYLRKILSSIVVSGIEYGR- 114 D TIA I++ ++ +D ++ G+IN Y+ + ++ +L +S + + Sbjct: 70 DWETIASKIISYLENRGLLDKCYVRKAEYVNGYINFYIDYNLMKNVLFENYLSMKIFDQI 129 Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 G G KV +E SANP P+HVG R AV+G+T A+L+ + G+ V +Y+ND G Q+ Sbjct: 130 KSFGDGEKVVVEHTSANPVHPLHVGSGRNAVIGNTYANLLRYMGFNVEERFYVNDMGRQV 189 Query: 175 NTLA 178 L Sbjct: 190 AVLV 193 >gi|229167047|ref|ZP_04294791.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH621] gi|228616400|gb|EEK73481.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH621] Length = 562 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 83/302 (27%), Positives = 129/302 (42%), Gaps = 81/302 (26%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG+ Y DL Y + YE FD +YV+G + S + Q Sbjct: 300 KSDGATIYATRDLTAALYRQNTYE--FDKALYVVGPEQSLHFN--------------QFF 343 Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416 +L +L + DGM P KMS R G I L V++E Sbjct: 344 TVLKKLGYNWVDGMEHVPFGFILKDGKKMSTRKGRIILLEEVLEEAVALAEQNIEEKNPN 403 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463 VG +V F L KN + + +F +K + + P YVQY +AR S Sbjct: 404 LKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ F F L + ++ S ++L L ++P+VIE A EP ++ Sbjct: 460 ILRKESVEFETCTFAL--------KDDYSWSVVKL---LNKFPQVIEAAFNKNEPSIISK 508 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+ D+A F+ ++ + +R ++ N K + RL L + V ++ GL ++GVE+P Sbjct: 509 YVLDVAQAFNKYYGN------VRILEENEEKES--RLALAYTVTVVLKEGLRLLGVEAPE 560 Query: 584 EM 585 EM Sbjct: 561 EM 562 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 ++ ++ L I + +ILD +IE P+ G + L++ P IA Sbjct: 2 NYKTQFAKSLSNIFTNELTQNQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V G ++N++ + + ++L I+ EYG+N G V Sbjct: 59 KELAEKLN-DPFFTKVEAVGP-YVNVFFNRETVSDEVLKIILAEKEEYGQNHFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|15639817|ref|NP_219267.1| arginyl-tRNA synthetase [Treponema pallidum subsp. pallidum str. Nichols] gi|189026055|ref|YP_001933827.1| arginyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14] gi|6094412|sp|O83803|SYR_TREPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|238689346|sp|B2S469|SYR_TREPS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|3323142|gb|AAC65797.1| arginyl-tRNA synthetase (argS) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018630|gb|ACD71248.1| arginyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14] gi|291060187|gb|ADD72922.1| arginyl-tRNA synthetase [Treponema pallidum subsp. pallidum str. Chicago] Length = 589 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 117/607 (19%), Positives = 251/607 (41%), Gaps = 100/607 (16%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI--AGKGF 88 ++V+E P + G ++ + ++ + P +A+ + ++ D + + A + Sbjct: 31 QLVMEEPPEPGMGDIAF-PLFLFAKRVRRSPAQLAQQLCTLLEEDTSMCAYGTPQARGPY 89 Query: 89 INLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 +N++L+ + L +I G YG +G ++ +EF S N P+HVGH R +G Sbjct: 90 LNVFLNKECVAAHTLDAIFAQGERYGHTQYLQGKRIMVEFSSPNTNKPLHVGHLRNNAIG 149 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 ++L+ ++AF G +V + IND G I ++ + ++ + + + G + Sbjct: 150 ESLSRIIAFCGADVFKVNIINDRGVHICK-SMCAYQKFAHGKTPAHTGIKSDRFVGDWYV 208 Query: 208 HVGKELADKYSSELLNFPEE----------KWLPIVKDYSVQAMMKI--------IRDDL 249 ++Y+ + +PEE +W D V+A+ + I+ Sbjct: 209 QF-----NRYAQQ---YPEEAEHDVRDLLQRWES--ADPHVRALWRTMNEWALRGIKQTY 258 Query: 250 KALNIQHD-IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308 + I D ++ + + +G R+ + G Y+ M+ Sbjct: 259 ERTGISFDKLYFESETYTKG-----REEVRRGLACGVFYQ---------------MEDNS 298 Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADL--AYFKCKYERGFDNMIYVMGSDHSGYVKR 366 + + +G D + LL+SDG+ Y D+ A F+ + + FD ++YV+G++ + + K Sbjct: 299 IWVDLSSLGLD-KKALLRSDGTTMYITQDIGTAIFRAQ-DWPFDQLLYVVGNEQNYHFKV 356 Query: 367 LEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS------ 419 L V + A Q++ + +V L +M R G + ++D + S Sbjct: 357 LFFVLRLLGYPWAQQLHHVSYGMVNLPHG----RMKSREGTVVDADDILDRLHSAAEEEI 412 Query: 420 ------DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF--------------YVQYAYA 459 ++++ +N + + ++ +++ VF Y+QY A Sbjct: 413 AKKGRENALKHAQCIAENVAIAALHYFLLQVSPQKDMVFHPEESLSFNGNTGPYLQYMGA 472 Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEP 518 R S+ ++ ++ D++ PR V + +E +L+ LA +P + A +P Sbjct: 473 RISSLLKKVQE---DVE-QKGPREVRCDPALLTHEAEWELVKALARFPACVTRAAQGHDP 528 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 + YLY L+ F + + P L + + RL+LV AV ++ + + ++ Sbjct: 529 SVITGYLYTLSKSFSRFY---HDCPILCEARPD---YACARLELVRAVRIVLRTAMRLVL 582 Query: 579 VESPNEM 585 + EM Sbjct: 583 IPFLEEM 589 >gi|124028037|ref|YP_001013357.1| arginyl-tRNA synthetase [Hyperthermus butylicus DSM 5456] gi|123978731|gb|ABM81012.1| Arginyl-tRNA synthetase [Hyperthermus butylicus DSM 5456] Length = 661 Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 3/101 (2%) Query: 79 DSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMH 137 D +F+ +G++N+ L+ + K I ++ + G YG K ++ IE SANP P+H Sbjct: 86 DVLFV--RGYLNIKLNAAEAAKLIFNAARLDGESYGIIKTDKPMRIVIEHTSANPVHPLH 143 Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 +GH R A +GDTLA ++ G+ V +YIND G Q+ +A Sbjct: 144 IGHARNASLGDTLARMLRARGHVVQTRFYINDLGRQVAVMA 184 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 68/301 (22%), Positives = 128/301 (42%), Gaps = 47/301 (15%) Query: 318 DDVDRP---LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAA 373 +D D P L +SDG+ Y D+AY K+ E D + V+ ++ ++ A Sbjct: 375 EDYDVPPLILQRSDGTTLYTTRDIAYSIKKFREFNADKVYNVIAAEQRLEQLQVRLALIA 434 Query: 374 VSEKKAQINVL--LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------- 416 + ++ +N + E+V L KMS R G ++TL +V++ Sbjct: 435 LGYRREGLNTIHYAYEMVNLPGQ----KMSGRRGRYVTLDELVEQAIRVAREEVEKRSPH 490 Query: 417 ------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 VG ++R+ ++ + + FD + + N Y+ YA+AR SI Sbjct: 491 LSAEEKERIARAVGVAAMRYALVSVSALKPMTFDLREALNFER-NSAPYIMYAHARASSI 549 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 +A + LD++ ++ +E + LI+ YP + A +P + + Sbjct: 550 LSKAAERGISLDWE----SIEYAAAEENQLRRSLILLALSYPYIFAKAADELKPELIVAF 605 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 L LA +F+ ++ G V ++ M +L +V+ V +I+ SGL ++G+E Sbjct: 606 LNKLADLFNKWYASGDS-----VVNEPDKGKQMFKLAMVYTVKNIVASGLRLLGIEPIER 660 Query: 585 M 585 M Sbjct: 661 M 661 >gi|303278782|ref|XP_003058684.1| predicted protein [Micromonas pusilla CCMP1545] gi|226459844|gb|EEH57139.1| predicted protein [Micromonas pusilla CCMP1545] Length = 580 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 46/79 (58%) Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161 + ++ SG YG G + IE S+NP P+H+G+ R ++G LA L A GY+V Sbjct: 1 MDAVAASGETYGHTNAAGGKRCIIEHTSSNPNAPLHIGNLRNVIIGAHLAKLQAACGYDV 60 Query: 162 TREYYINDAGAQINTLALS 180 + +Y+ND GAQI AL+ Sbjct: 61 KQAFYVNDLGAQIGLTALA 79 >gi|65319476|ref|ZP_00392435.1| COG0018: Arginyl-tRNA synthetase [Bacillus anthracis str. A2012] Length = 562 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 82/300 (27%), Positives = 126/300 (42%), Gaps = 77/300 (25%) Query: 326 KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 KSDG+ Y DL A + GFD +YV+G + S + Q + Sbjct: 300 KSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQSLHFN--------------QFFTV 345 Query: 385 LCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE----------------- 416 L +L + DGM P KMS R G I L V++E Sbjct: 346 LKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPNLK 405 Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIF 465 VG+ +V F L KN + + +F +K + + P YVQY +AR SI Sbjct: 406 QKEEVAKQVGAGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSIL 461 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 R+ F F L D ++ L + P+VIE A EP ++ Y+ Sbjct: 462 RKESVEFETCTFALK-----------DDHSWSVVKLLNKXPQVIEIAFNKNEPSVISKYV 510 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 D+A F+ ++ + +R ++ + K + RL LV+AV ++ GL ++GVE+P EM Sbjct: 511 LDVAQSFNKYYGN------VRILEESEEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 562 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ ++ L I +++ILD +IE P+ G + L++ P IA Sbjct: 2 DYKTQFAESLSNIFTNELTQQQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V G ++N++ + + +L +I+ EYG+N G V Sbjct: 59 KEVAEKLS-DPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNYFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|229144803|ref|ZP_04273200.1| Arginyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24] gi|228638525|gb|EEK94958.1| Arginyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24] Length = 562 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 81/302 (26%), Positives = 127/302 (42%), Gaps = 81/302 (26%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG+ Y DL Y + Y GFD +YV+G + S + Q Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343 Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416 +L +L + DGM P KMS R G I L V++E Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRAILLEEVLEEAIELAKQNIEEKNPN 403 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463 VG +V F L KN + + +F +K + + P YVQY +AR S Sbjct: 404 LKQKEVVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ F F L D ++ L ++P++IE A EP ++ Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIEAAFNKNEPSIISK 508 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+ D+A F+ ++ + +R ++ + K + R+ LV+AV ++ GL ++GVE+P Sbjct: 509 YILDVAQSFNKYYGN------VRILEESKEKDS--RIALVYAVTVVLKEGLRLLGVEAPE 560 Query: 584 EM 585 EM Sbjct: 561 EM 562 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ + L I +K+ILD +IE P+ G + L++ P IA Sbjct: 2 DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + + D V G ++N++ + + +L +++ E+G+N G V Sbjct: 59 KEVAEKFN-DTFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|195041309|ref|XP_001991229.1| GH12545 [Drosophila grimshawi] gi|193900987|gb|EDV99853.1| GH12545 [Drosophila grimshawi] Length = 668 Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 125/597 (20%), Positives = 239/597 (40%), Gaps = 101/597 (16%) Query: 43 GHLSTNAAMILSRPL---GLD--PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N AM L + L G++ P IA I P + + +AG GFIN++LS Y Sbjct: 119 GDYQCNNAMGLVKKLKEAGINKSPREIAAEIQKCCPDSPIIKKIEVAGAGFINVFLSKEY 178 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + +++ G++ R +V ++F S N MHVGH R ++G++++ L+ F Sbjct: 179 AVNSIINMLRDGVKPPR---VPRKRVLVDFSSPNIAKQMHVGHLRSTIIGESISRLLEFM 235 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY 217 ++V R ++ D G Q L + + N ++ P P L+ KE ++ Sbjct: 236 QHDVIRINHLGDWGTQFGMLIAHL----EDCFPNFVNESP----PIGDLQEFYKESKKRF 287 Query: 218 SSELLNFPEEKWLPIVKDYS--------VQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 ++ NF + + +V S Q + + R + + + + D+ I+E RG+ Sbjct: 288 DAD-DNFKKRAYNRVVSLQSGDPKSTKAWQLICDVSRKEFQKIYDRLDVTITE----RGE 342 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 ++ I+ +SK + D R+ + + G + ++KSDG Sbjct: 343 SFYQSRML-----------AIVELLRSKNLLELDEGREIMWTDDSKSG--IPLTVVKSDG 389 Query: 330 SYTYFAADLAYFKCKYERGFD-NMIYVMGSDHSGYVKRLEAVAAAVS--------EKKAQ 380 +TY +D+A + + E +IYV+ S S + + A Q Sbjct: 390 GFTYDTSDMAAIRHRIEEDLAIWIIYVVDSGQSTHFNTIFKAAERCGILNPNVHRVDHVQ 449 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 V+L E DG K R+GD + L ++DE S++ + ++ L + Sbjct: 450 FGVVLGE------DGKKFKT--RSGDTVKLSDLLDEGMKYSLKQLQERGRDQILTHTELV 501 Query: 441 KVKE----------------------------QSKENPVFYVQYAYARCRSIFRQAKDIF 472 + +E + N Y+ Y Y R SI R + + F Sbjct: 502 EAQEAVAYGCIKYTDLCHNRISDYVFSFEKMLDDRGNTAVYLLYTYTRICSIARNSGEDF 561 Query: 473 PDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 ++ L N+ E D E +L L ++ V+ + L + Y++ S Sbjct: 562 SNVAAILDKYNL-----ELDHEKEWKLAKTLLKFHDVLIKCANGLFLHFLCEFCYEVCSA 616 Query: 532 FHGHWSHG---RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + +N + ++ N+ R+ + A A+++ + I+G+++ +M Sbjct: 617 FTEFYDSCYCIEKNKDGKIIKINHS-----RILICEATAALLRTCFKILGLKTVAKM 668 >gi|73973436|ref|XP_867850.1| PREDICTED: similar to arginyl-tRNA synthetase-like isoform 2 [Canis familiaris] Length = 421 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 101/414 (24%), Positives = 180/414 (43%), Gaps = 62/414 (14%) Query: 27 KILDRIVIERPRDCAHGHLSTNAAMI----LSRPLGLDPLTIAELIVARIKIDPDVDSVF 82 K + + I R + A LS ++ + SRP D A + ++K D V + Sbjct: 26 KSISAVPISRKEEVADFQLSVDSLLENNNDHSRP---DTQVQARKLAEKLKCDSVVSEI- 81 Query: 83 IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYG-RNLIGKG---TKVNIEFVSANPTGPMH 137 G+G +N ++ L K +L ++ G +YG ++ + G K+ +EF S N H Sbjct: 82 STGQGTVNFKINRELLTKTVLQQVIKDGSKYGLKSELFSGLPQKKIVVEFSSPNIAKKFH 141 Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDL 196 VGH R ++G+ +A+L G++VTR Y+ D G Q L + Y++ L ++ Sbjct: 142 VGHLRSTIIGNFIANLKEALGHQVTRINYLGDWGMQFGLLGTGFQLFGYEEKLQSS---- 197 Query: 197 PEGYYPGVYLKHVGKELAD-----KYSSEL---LNFPEEKWLPI---VKDYSVQAMMKII 245 P + VY++ V KE AD K + E L + + L + +D S++ +++ Sbjct: 198 PLQHLFEVYVQ-VNKEAADDKNVAKSAHEFFQRLELGDTQALALWQKFRDLSIEEYVRV- 255 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 K L + D + S + F+R + ++D+ +G + + I K T D+ Sbjct: 256 ---YKRLGVHFDEY-SGESFYREKSQEVLKLLDS---KGLLQKTI------KGTAIVDLS 302 Query: 306 RKQLLFRSTMVGDDVD-RPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY 363 GD L++SDG+ Y DLA + ++ FD MIYV + Sbjct: 303 GN---------GDPSSICTLMRSDGTSLYATRDLAAAIDRMDKYNFDTMIYVTDKGQKKH 353 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 +++ + + A+ C+ V G+ M R GD L V++E+ Sbjct: 354 FQQVFQMLQIMGYDWAE----RCQHVPF---GVVQGMKTRKGDVTFLEDVLNEI 400 >gi|325118008|emb|CBZ53559.1| putative arginyl-tRNA synthetase [Neospora caninum Liverpool] Length = 944 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 48/151 (31%), Positives = 76/151 (50%), Gaps = 24/151 (15%) Query: 61 PLTIAELIVARIK-----IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS---GIEY 112 P IAE ++ ++ ++P V+ ++G+GFIN LS YL L ++ +S G Sbjct: 97 PEAIAEGLLNNLQSERRLLEPVVELTGVSGRGFINFRLSAGYLAARLVNMFLSPKEGTRL 156 Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG- 171 G + +V +++ S N +HVGH R AVVGD LA+L+ F+G+ V R+ ++ D G Sbjct: 157 GFPKVLTPERVVVDYASPNICKDLHVGHLRSAVVGDALANLLEFAGHRVVRQNHLGDFGC 216 Query: 172 ---------------AQINTLALSVFWRYQQ 187 A+ + ALS R QQ Sbjct: 217 PAALVLGALEDAELRARPDVQALSAALREQQ 247 Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust. Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 11/139 (7%) Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF----DTSELQLIVHL 502 K N Y+ Y+ R + I R+A + +L N + + + + + QL V L Sbjct: 809 KGNTAPYILYSLVRVKGILRRA-GWTAGVPTELHGHNNLQSDIVYHLHQNGLDRQLAVRL 867 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 + +++A P KL YLY L F+ + + +A + L + RL L Sbjct: 868 LGFAMAVQDAIETLMPSKLTAYLYSLCLAFNAFYE------KCEVTKAVDEGLRLTRLLL 921 Query: 563 VHAVASIINSGLNIIGVES 581 VH V I+ + L+++G+++ Sbjct: 922 VHGVRQILETSLDLLGIQA 940 >gi|224534693|ref|ZP_03675265.1| arginine--tRNA ligase [Borrelia spielmanii A14S] gi|224513941|gb|EEF84263.1| arginine--tRNA ligase [Borrelia spielmanii A14S] Length = 586 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 125/596 (20%), Positives = 240/596 (40%), Gaps = 96/596 (16%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I I++P G +S +S+ L L TI+E I+ +K ++ A ++N+ Sbjct: 33 INIQKPPKNDLGDISI-LIFEISKTLKLPIATISEEIIKNLKAKYEIK----AMGPYLNI 87 Query: 92 YL-SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + Y++ + I YG + K+ +EF S N P+HVGH R +G++L Sbjct: 88 KIPRKEYIKNTIQMINTQKDTYGTSKYLDNKKIILEFSSPNTNKPLHVGHLRNDAIGESL 147 Query: 151 ASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRY---QQALYNNDSDLPEGYYPGVY 205 + ++ G ++T+ IND G I + LA F ++A D + + Y Sbjct: 148 SRILKAVGAKITKINLINDRGVHICKSMLAYKKFGNGITPEKAFKKGDHFIGDFYVQYNK 207 Query: 206 LKHVGKELADKYSSELLNFPE------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHD-I 258 + ++ LL + + E W + K ++++ I++ K N D I Sbjct: 208 YAQENENAEEEIQDLLLKWEQKDASTIELWEKLNK-WAIEG----IKETYKITNTSFDKI 262 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYE----GILPPPKSKTTQKCDMDRKQLLFRST 314 ++ + F G ++++ +G+ Y+ I + +K D KQ Sbjct: 263 YLESEIFEIG-----KNVVLEGLEKGFCYKREDGAICIDLPLDSDEKVDTKVKQ------ 311 Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAA 373 + L++S+G+ Y DL + E F+ MIYV+G++ + K L V+ Sbjct: 312 -------KVLIRSNGTSIYLTQDLGNIAVRTKEFNFEEMIYVVGNEQIQHFKSLFFVSEK 364 Query: 374 VS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----TLRHVVDEVGSDSVRFMMLW 428 + K ++ L +V L DG KM R G+ I + +++ + S + + Sbjct: 365 LGISKNKKLFHLSHGMVNLI-DG---KMKSREGNVIDGDNLISDLMESIMSPEITQKIEN 420 Query: 429 RKNSE-------LLDFDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQ 467 ++N++ L + +K ++ +F Y+QY AR SI + Sbjct: 421 KENAKKNALNIALGAIHYYLLKSAVHKDIIFNKKESLSFTGNSGPYIQYVGARINSILEK 480 Query: 468 ----AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 + I +DF+L E +++ ++E I A P L Sbjct: 481 YNALSIPIMEKIDFELLKHE----------KEWEIVKIISELEENIIKAAKDLNPSILTS 530 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 Y Y LA F ++ +R + N LT R++ + A+ I + + ++ + Sbjct: 531 YSYSLAKHFSAYYQ------EVRVIDTFNIDLTTARIEFLKAILQTIKNCMYLLNI 580 >gi|260833402|ref|XP_002611646.1| hypothetical protein BRAFLDRAFT_117121 [Branchiostoma floridae] gi|229297017|gb|EEN67656.1| hypothetical protein BRAFLDRAFT_117121 [Branchiostoma floridae] Length = 485 Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 7/124 (5%) Query: 43 GHLSTNAAMILSRPLGLD-----PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N+AM + + L P IA+ IV+ + V+ V IAG GFIN+++ S+ Sbjct: 112 GDYQCNSAMSIGQLLKAQGKKAVPREIAQAIVSNLPESGIVEKVEIAGPGFINIHVRKSF 171 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + ILS+ + G++ + + +V I++ S N MHVGH R ++GD+ A LM F Sbjct: 172 VSSILSTALREGVKPPP--VDRKLRVVIDYSSPNIAKEMHVGHLRSTIIGDSFARLMKFV 229 Query: 158 GYEV 161 G++V Sbjct: 230 GHDV 233 >gi|42781301|ref|NP_978548.1| arginyl-tRNA synthetase [Bacillus cereus ATCC 10987] gi|42737223|gb|AAS41156.1| arginyl-tRNA synthetase [Bacillus cereus ATCC 10987] Length = 433 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 78/289 (26%), Positives = 129/289 (44%), Gaps = 55/289 (19%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHS-------------GY--VKRL 367 KSDG+ Y DL Y + Y FD +YV+G + S GY V + Sbjct: 171 KSDGATIYATRDLTAALYRQNTY--AFDKALYVVGPEQSLHFNQFFTVLKKLGYTWVDGM 228 Query: 368 EAV--------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 E V +S +K +I +LL E++ D + ++ + V +VG Sbjct: 229 EHVPFGFILKDGKKMSTRKGRI-ILLEEVLEEAIDLAKQNIEEKNPNLKQKEEVAKQVGV 287 Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 +V F L KN + + +F +K + + P YVQY +AR SI R+ F Sbjct: 288 GAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSILRKESVEFETCT 343 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 F L D ++ L ++P++IE A EP ++ Y+ D+A F+ ++ Sbjct: 344 FALK-----------DDYSWSVVKFLNKFPQIIEAAFNKNEPSIISKYILDVAQSFNKYY 392 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +R ++ + K + RL LV+AV ++ GL ++GVE+P EM Sbjct: 393 GN------VRILEESKEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 433 >gi|47224362|emb|CAG09208.1| unnamed protein product [Tetraodon nigroviridis] Length = 600 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 131/577 (22%), Positives = 232/577 (40%), Gaps = 97/577 (16%) Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIE-YGRNL-----I 117 E + +++K D V+ V AG G IN + L +K+L E +G N + Sbjct: 65 TEHLASQLKPDRVVEDV-SAGSGVINFKVHRKLLVQKMLEPFGKGQDEMFGLNSDLFSSL 123 Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 +GT + +E+ S N H GH R V+G+ +A+L G +V R Y+ D G Q L Sbjct: 124 NRGTTL-VEYSSPNIAKKFHAGHLRSTVIGNFIANLKQSLGNKVIRMNYLGDWGMQFGLL 182 Query: 178 ALSVFWRY--QQALYNNDSDLPEGYYPGVYLK-------HVGKELADKYSSELLNFPEEK 228 + F ++ Q+ L N P + VY+K G A + L E++ Sbjct: 183 G-AGFGQFGCQEELKQN----PLQHLFEVYVKANQEAESSGGLAQAAREFFRRLEQREQE 237 Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288 L + + + + + R + L + D++ E G +++++ L +G + Sbjct: 238 ALALWQQFREITVTEYQR-VYERLGVHFDVYSGESSHQDG----VQEVLQQLEGRGLLKT 292 Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSY------TYFAADLAYF 341 + DM + RS + R +L ++ S+ + + DLA Sbjct: 293 SERGTGVVDLSPDGDMSSVCTVLRSDGTSLYITRSVLPEAQPSHPPEELTSPRSRDLAAA 352 Query: 342 KCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400 + ER FD MIYV S + ++L + + A C V G+ M Sbjct: 353 IDRMERYSFDEMIYVTDKSQSNHFRQLFQLLPTLGHSWAD----RCRHVPF---GLVRGM 405 Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD------------------------ 436 R+GD + L V+DE + +R M + ++ + Sbjct: 406 KTRSGDVVFLEDVLDEARARMLRNMEQSKTTKQMENPEETAEKVGIAALIIQDFKGPLLS 465 Query: 437 ---FDFCKVKEQSKENPVFYVQYAYARCRSIFRQA-----KDIFPDLDFDLFPRNVIPQE 488 FD+ +V + + VF +QY +AR S+ R++ +D P L D P V Sbjct: 466 DYTFDWDRVLQAQGDTGVF-LQYTHARLCSLVRRSGAAEVRDFEPSLLLD--PTGVA--- 519 Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548 ++ HL Y ++ + +P L +L L+ H S RE P V Sbjct: 520 ---------VLQHLLRYDELLYQSAQDLQPKHLVGFLLKLS---HLIASAHRELP----V 563 Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +++++ RL+L A S++ SG++I+G+ M Sbjct: 564 KGSSQEVAQARLRLFGAARSVLASGMSILGIAPVERM 600 >gi|150015905|ref|YP_001308159.1| arginyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] gi|189083528|sp|A6LS73|SYR_CLOB8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|149902370|gb|ABR33203.1| arginyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052] Length = 563 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 119/536 (22%), Positives = 209/536 (38%), Gaps = 87/536 (16%) Query: 88 FINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N ++ + + + G YG + IG+G V +E+ S N P HVGH + Sbjct: 77 YVNFFVDKGVFAENTIKKALEDGENYGASNIGEGKTVCVEYSSPNIAKPFHVGHLFTTAI 136 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF--WRYQQALYNNDSDLPEGYYPGV 204 G++L + GY ++ D G Q L +S + W ++AL P + Sbjct: 137 GNSLYKMFKKEGYNTVGLNHLGDWGTQFGKL-ISAYDRWVDEEAL----EKAPIDELLRI 191 Query: 205 YLK-HVGKELADKYSSEL-LNFPEEKWLPIVKDYSVQAMMKIIRD-DLKALNIQHDIFIS 261 Y+K H E E NF K L D A+ RD LK ++I Sbjct: 192 YVKFHEEAEKDPSLEDEARANF---KALE-TGDEKATALWTRFRDLSLKEFERVYNILGV 247 Query: 262 EDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + D G+ + +++ L +G + E S Q ++ + + GD Sbjct: 248 KFDSLAGEAFYNDKMDVVVNELKEKGLLVE-------SNGAQVVMLEEYNMPPCIVLKGD 300 Query: 319 DVDRPLLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375 G+ Y DLA Y K Y+ F +YV+G+ + + K++ V Sbjct: 301 ----------GASIYATRDLAAAMYRKKTYD--FHKCVYVVGTPQALHFKQVFKVLELAG 348 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435 + A+ V + + + D K+S R G + L ++ E ++ ++ KN EL Sbjct: 349 HEWAKDCVHVGFGLVKFADR---KLSTRNGSIVLLDDLLREAVEKTME--VINEKNPELE 403 Query: 436 DFD------------FCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAK 469 + + F +K +++ VF YVQY+YAR SI + K Sbjct: 404 NKEEVAKKIGVGAVIFTYLKNSREKDIVFDWKEILSFDGETGPYVQYSYARGNSILNRGK 463 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 + +D+ E +L+ +A + VI A EP L Y+ ++A Sbjct: 464 ECTGTVDYSKLS----------SKEEFELVKSIANFNSVITLALDKLEPSILTRYVIEVA 513 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ ++ + + L RL LV A +I +GL ++G++ +M Sbjct: 514 KGFNKFYNAH------SVLNLEDEDLKATRLNLVKASLQVIKNGLELLGIDVVEKM 563 >gi|229043945|ref|ZP_04191639.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH676] gi|228725385|gb|EEL76648.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH676] Length = 562 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 82/302 (27%), Positives = 126/302 (41%), Gaps = 81/302 (26%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG+ Y DL Y + Y GFD +YV+G + S + Q Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343 Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416 +L +L + DGM P KMS R G I L V++E Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463 VG +V F L KN + + +F +K + + P YVQY +AR S Sbjct: 404 LKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ F F L D ++ L ++P+VIE A EP ++ Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEAAFNKNEPSIISK 508 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+ D+A F+ ++ + +R ++ + K + RL LV+AV ++ GL ++GV +P Sbjct: 509 YILDVAQSFNKYYGN------VRILEESKEKDS--RLALVYAVTVVLKEGLRLLGVGAPE 560 Query: 584 EM 585 EM Sbjct: 561 EM 562 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ + L I +K+ILD +IE P+ G + L++ P IA Sbjct: 2 DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + + DP V G ++N++ + + +L +++ E+G+N G V Sbjct: 59 KEVAEKFN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|229017498|ref|ZP_04174399.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH1273] gi|229023712|ref|ZP_04180204.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH1272] gi|228737637|gb|EEL88141.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH1272] gi|228743822|gb|EEL93923.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH1273] Length = 562 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 83/302 (27%), Positives = 131/302 (43%), Gaps = 81/302 (26%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG+ Y DL Y + Y FD +YV+G + S + Q Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--AFDKALYVVGPEQSLHFN--------------QFF 343 Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416 +L +L + DGM P KMS R G I L V++E Sbjct: 344 TVLKKLGYNWVDGMEHVPFGFILKDGKKMSTRKGRIILLEEVLEEAVALAEQNIEEKNPN 403 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463 VG +V F L KN + + +F +K + + P YVQY +AR S Sbjct: 404 LKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ F F L + ++ S ++L L ++P+VIE A EP ++ Sbjct: 460 ILRKESVEFETCTFAL--------KDDYSWSVVKL---LNKFPQVIEAAFNKNEPSIISK 508 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+ D+A F+ ++ + +R ++ + K + RL LV+AV ++ GL+++GVE+P Sbjct: 509 YVLDVAQSFNKYYGN------VRILEESEEKDS--RLALVYAVTVVLKEGLHLLGVEAPE 560 Query: 584 EM 585 EM Sbjct: 561 EM 562 Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ ++ L I + +ILD +IE P+ G + L++ P IA Sbjct: 2 DYKTQFAKSLSNIFTNELTKNQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V G ++N++ + + ++L +I+ EYG+N G V Sbjct: 59 KEVAEKLN-DPFFTKVEAVGP-YVNIFFNRETVSDEVLKTILAKKEEYGQNHFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|70607149|ref|YP_256019.1| arginyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639] gi|76363443|sp|Q4J904|SYR_SULAC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|68567797|gb|AAY80726.1| arginyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639] Length = 618 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 55/92 (59%), Gaps = 2/92 (2%) Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 ++N ++ L K+L + + +YG ++ +E SANP P+H+GH R +++G Sbjct: 73 YVNAFVDEKELFKLLFTEMQD--DYGVEKTENPKRIVVEHTSANPIHPLHIGHLRNSILG 130 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 DT++ ++ G++V R +Y+NDAG Q+ L L Sbjct: 131 DTISRMLKIRGHDVNRRFYVNDAGRQVAILTL 162 Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 64/284 (22%), Positives = 125/284 (44%), Gaps = 40/284 (14%) Query: 324 LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 L +SDG+ Y D+AY K+ + D +I V+ S +L A + ++ N Sbjct: 353 LTRSDGTSLYTTRDIAYTVKKFSDFKADTVINVIAEQQSIPQMQLRASLYLLGYERLAQN 412 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG---------------------SDS 421 ++ + GM +MS R G FI+L V+++V + + Sbjct: 413 LVHYSYGMVNLQGM--RMSGRLGRFISLDDVIEKVSEVAKKKIEEKSGDITNLRDIVNSA 470 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 +R+ +L +++ + F+ + + ++N Y+QY YAR +I + +D D DL Sbjct: 471 IRYAILSVASNKPVTFNINNIVD-FEQNSGPYLQYTYARAYNILAKNQDEIKLTDADL-- 527 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 S+ + +L++ +A +P A P L +L A VF+ W + Sbjct: 528 -------SDLIGDKRRLLLLIARFPETFNKAIDELRPEDLIDFLRRTADVFN-RWYNFE- 578 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +Q + + + RL +V + ++ +GLN +G++ ++M Sbjct: 579 ----RVLQEPDYRKRITRLFIVKGIERVLYNGLNALGIKPLSKM 618 >gi|218234429|ref|YP_002366898.1| arginyl-tRNA synthetase [Bacillus cereus B4264] gi|218162386|gb|ACK62378.1| arginine--tRNA ligase [Bacillus cereus B4264] Length = 562 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 82/302 (27%), Positives = 126/302 (41%), Gaps = 81/302 (26%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG+ Y DL Y + Y GFD +YV+G + S + Q Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343 Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416 +L +L + DGM P KMS R G I L V++E Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463 VG +V F L KN + + +F +K + + P YVQY +AR S Sbjct: 404 LKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ F F L D ++ L ++P+VIE A EP ++ Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEAAFNKNEPSIISK 508 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+ D+A F+ ++ + +R ++ + K + RL LV+AV ++ GL ++GV +P Sbjct: 509 YILDVAQSFNKYYGN------VRILEESKEKDS--RLALVYAVTVVLKEGLRLLGVGAPE 560 Query: 584 EM 585 EM Sbjct: 561 EM 562 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ + L I +K+ILD +IE P+ G + L++ P IA Sbjct: 2 DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + + DP V G ++N++ + + +L +++ E+G+N G V Sbjct: 59 KEVAEKFN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTVLAEKEEFGQNHFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|229059878|ref|ZP_04197253.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH603] gi|228719423|gb|EEL71026.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH603] Length = 314 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 83/302 (27%), Positives = 129/302 (42%), Gaps = 81/302 (26%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG+ Y DL Y + YE FD +YV+G + S + Q Sbjct: 52 KSDGATIYATRDLTAALYRQNTYE--FDKALYVVGPEQSLHFN--------------QFF 95 Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416 +L +L + DGM P KMS R G I L V++E Sbjct: 96 TVLKKLGYDWVDGMEHVPFGFILKDGKKMSTRKGRIILLEEVLEEAVALAEQNIEEKNPN 155 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463 VG +V F L KN + + +F +K + + P YVQY +AR S Sbjct: 156 LKQKEEVAKQVGIGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 211 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ F F L + ++ S ++L L ++P+VIE A EP ++ Sbjct: 212 ILRKDSVEFETCTFAL--------KDDYSWSVVKL---LNKFPQVIEAAFNKNEPSTISK 260 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+ D+A F+ ++ + +R ++ N K + RL L +AV ++ GL ++GV +P Sbjct: 261 YVLDVAQAFNKYYGN------VRILEENEEKES--RLALAYAVTVVLKEGLRLLGVGAPE 312 Query: 584 EM 585 EM Sbjct: 313 EM 314 >gi|302543493|ref|ZP_07295835.1| arginine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653] gi|302461111|gb|EFL24204.1| arginine-tRNA ligase [Streptomyces himastatinicus ATCC 53653] Length = 601 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 73/141 (51%), Gaps = 14/141 (9%) Query: 47 TNAAMILSRPLGLDPLTIAELIVARIKIDP---DVDSVF----IAGKGFINLYLSPSYLR 99 N + L++ L +P +A +V R+ + P D DSV ++G GF+N+ ++ S + Sbjct: 43 ANGMLALAKQLKGNPRELAGKVVERLPVAPSSADPDSVIADIEVSGPGFLNITVADSAIT 102 Query: 100 KILSSIVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 L++ G+ + + GT V I++ N MHVGH R AV+GD + ++ F Sbjct: 103 ATLAARAADDRLGVPFAAD---AGTTV-IDYAQPNVAKEMHVGHLRSAVIGDAVVKILEF 158 Query: 157 SGYEVTREYYINDAGAQINTL 177 +G +V R ++I D G Q L Sbjct: 159 TGEKVIRRHHIGDWGTQFGML 179 Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 36/181 (19%) Query: 323 PLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 PL+ KSDG + Y A DL+ + + + D ++YV+ + S + K + A + Sbjct: 317 PLIVQKSDGGFGYAATDLSAIRDRVQNLQADTLLYVVDARQSLHFKMVFETARRIGWLNE 376 Query: 380 QIN-VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 +++ V L L +DG P K R G+ + L ++DE Sbjct: 377 KVHAVQLAFGTVLGKDGKPFKT--REGETVRLEDLLDEASERAAAVVREKSEKLGLTEAE 434 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 VG +V++ L S FD ++ + + V Y+QYAYAR +SI R+A Sbjct: 435 ILERGGQVGIGAVKYADLSTSASRDYKFDLDQMVSLNGDTSV-YLQYAYARIQSILRRAD 493 Query: 470 D 470 + Sbjct: 494 E 494 >gi|229029913|ref|ZP_04185982.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH1271] gi|228731421|gb|EEL82334.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH1271] Length = 562 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 75/289 (25%), Positives = 129/289 (44%), Gaps = 55/289 (19%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHS---------------GYVKRL 367 KSDG+ Y DL Y + Y FD +YV+G + S +V + Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--AFDKALYVVGPEQSLHFNQFFTVLKKIGYNWVDGM 357 Query: 368 EAV--------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 E V +S +K ++ +LL E++ D + ++ + V +VG+ Sbjct: 358 EHVPFGFILKDGKKMSTRKGRV-ILLEEVLEEAIDLAKRNIEEKNPNLKQKEEVAKQVGA 416 Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 +V F L KN + + +F +K + + P YVQY +AR SI R+ F Sbjct: 417 GAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSILRKESVEFETCT 472 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 F L D ++ L ++P+VIE A EP ++ Y+ D+A F+ ++ Sbjct: 473 FALK-----------DDHSWSVVKLLNKFPQVIEAAFNKNEPSIISKYVLDVAQSFNKYY 521 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +R ++ + K + RL LV+AV ++ GL ++GV++P EM Sbjct: 522 GN------VRILEESEEKDS--RLALVYAVTVVLKEGLRLLGVDAPEEM 562 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ ++ L I + +ILD +IE P+ G ++ L++ P IA Sbjct: 2 DYKTQFAESLSNIFTNELTQNQILD--LIETPKQDDFGDVAF-PCFSLAKQYKKSPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ +P V G ++N++ + + +L +++ EYG+N G V Sbjct: 59 KEVAKKLS-NPFFTKVEAVGP-YVNVFFNREIVSDAVLKTVLAEKEEYGQNYFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|229172904|ref|ZP_04300458.1| Arginyl-tRNA synthetase 2 [Bacillus cereus MM3] gi|228610649|gb|EEK67917.1| Arginyl-tRNA synthetase 2 [Bacillus cereus MM3] Length = 595 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 82/302 (27%), Positives = 126/302 (41%), Gaps = 81/302 (26%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG+ Y DL Y + Y FD +YV+G + S + Q Sbjct: 333 KSDGATIYATRDLTAALYRQNTY--AFDKALYVVGPEQSLHFN--------------QFF 376 Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416 +L +L + DGM P KMS R G I L V++E Sbjct: 377 TVLKKLGFTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIDLAKQNIEEKNPN 436 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463 VG +V F L KN + + +F +K + + P YVQY +AR S Sbjct: 437 LKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 492 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ F F L D ++ L ++P+VIE A EP ++ Sbjct: 493 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQVIEAAFNKNEPSIISK 541 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+ D+A F+ ++ + +R ++ + K + RL LV+AV ++ GL ++GVE+P Sbjct: 542 YVLDVAQSFNKYYGN------VRILEESEEKDS--RLALVYAVTVVLKEGLRLLGVEAPE 593 Query: 584 EM 585 EM Sbjct: 594 EM 595 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ ++ L I + +ILD +IE P+ G + L++ P IA Sbjct: 35 DYKTQFAESLSNIFTNELTQNQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 91 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGKGTKVN 124 + + ++ DP V G ++N++ + + + +++G E YG+N G V Sbjct: 92 KEVEEKLN-DPFFAKVEAVGP-YVNVFFNRETVSDAVLKTILAGKEKYGQNHFGCEKTVV 149 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 150 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 202 >gi|67970581|dbj|BAE01633.1| unnamed protein product [Macaca fascicularis] Length = 454 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 107/507 (21%), Positives = 198/507 (39%), Gaps = 110/507 (21%) Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA----------------- 178 MHVGH R ++G++++ L F+GY+V R + D G Q L Sbjct: 1 MHVGHLRSTIIGESVSRLFEFAGYDVLRLNRVGDWGTQFGMLIAHLQDKFPDYLTVSPPI 60 Query: 179 --LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236 L F++ + ++ + + + Y V L GK N K ++ D Sbjct: 61 GDLQAFYKESKKRFDTEEEFKKRAYQCVVLLQ-GK-----------NPDITKAWKLICDV 108 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 S Q KI AL++ + + F++ + DI+ +G+V Sbjct: 109 SRQEFNKI----YDALDVS--LIERGESFYQ---DRMNDIVQEFEDRGFV---------- 149 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355 + D D ++++F + G + ++KSDG YTY +DLA K + E D +IYV Sbjct: 150 ----QVD-DGRKIVF---VPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLSEEKADMIIYV 201 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI-------KMSKRAGDFI 408 + S S + + + A A + ++ R++ G + K RAG+ + Sbjct: 202 VDSGQSVHFQTIFAAAQMIGWYDPKVT-------RVFHAGFGVVLGEDKKKFKTRAGETV 254 Query: 409 TLRHVVDE-----------------------------VGSDSVRFMMLWRKNSELLDFDF 439 L ++ E + +++ L F F Sbjct: 255 RLMDLMGEGLKRSMDKLKEKERDKVLTAEELNAAQTSIAYGCIKYADLSHNRLNDYIFSF 314 Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD-TSELQL 498 K+ + + N Y+ YA+ R RSI R A ++D ++ + + D E +L Sbjct: 315 DKMLD-DRGNTAAYLLYAFTRIRSIARLA-----NIDEEMLQKAARETKILLDHEKEWKL 368 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 + +P +++ + L Y+Y+LA+ F + + R K+ M Sbjct: 369 GRCILRFPEILQKILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDR-QTGKILKVNMW 427 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 R+ L AVA+++ G +I+G++ M Sbjct: 428 RMLLCEAVAAVMAKGFDILGIKPVQRM 454 >gi|296393184|ref|YP_003658068.1| arginyl-tRNA synthetase [Segniliparus rotundus DSM 44985] gi|296180331|gb|ADG97237.1| arginyl-tRNA synthetase [Segniliparus rotundus DSM 44985] Length = 590 Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 11/145 (7%) Query: 38 RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 R H N + L+R L +P +A + AR++ V +G GF+NL + S Sbjct: 40 RPSEHADYQANGVLALARQLKANPRELAGKVAARLESSELFAQVEASGPGFLNLVFADSA 99 Query: 98 LRKILSSIVVSGIEYGRNLIG-----KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 L L+ +G +G +G I++ + N MHVGH R ++GD L Sbjct: 100 LTGQLAE------RHGDPRLGLGAPKQGRTTVIDYSAPNIAKEMHVGHLRSTIIGDALVR 153 Query: 153 LMAFSGYEVTREYYINDAGAQINTL 177 L+ F+G +V R+ ++ D G Q L Sbjct: 154 LLTFTGSQVIRQNHVGDWGTQFGML 178 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 68/289 (23%), Positives = 118/289 (40%), Gaps = 47/289 (16%) Query: 326 KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 KSDG + Y A DLA + + + ++YV+GS + + K + A + V Sbjct: 320 KSDGGFGYAATDLATLRHRVRDLKATRLLYVVGSPQALHFKMVFETARRAGYLPDGVEVA 379 Query: 385 LCELVR-LYRDGMPIKMSKRAGDFITLRHVVDE--------------------------- 416 + L DG P K R G+ I L ++DE Sbjct: 380 HVQFGSVLGADGKPFK--SREGETIRLIALLDEAVARAKATIAERSPELEPNAQELRAHE 437 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG + ++ L + FD ++ + N Y+QYA+AR RS+ +A + P Sbjct: 438 VGIGAAKYADLSTSRTRDYVFDLDRMLSL-QGNTGVYLQYAHARIRSLLARAGEAGP--- 493 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 P V + + +E L++ L E+ V+++ + EP++L YLY LA F + Sbjct: 494 ---APEGV---PAPLEPAERALLLALDEFGDVLKSVDESLEPHRLCAYLYTLAQAFSDFY 547 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P + A R+L R + + GL+++G+ +P + Sbjct: 548 E---ACPVAKAPTAGQRRL---RTAICELTGDTLALGLSLLGIAAPERL 590 >gi|320100813|ref|YP_004176405.1| arginine--tRNA ligase [Desulfurococcus mucosus DSM 2162] gi|319753165|gb|ADV64923.1| Arginine--tRNA ligase [Desulfurococcus mucosus DSM 2162] Length = 754 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 5/99 (5%) Query: 88 FINLYLS-----PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 FIN Y++ S + + S++ + IG G V +E SANP P+H+G R Sbjct: 91 FINGYVNVEVDYSSIFKSFMESLLTGKLLEDLRSIGTGRSVVVEHTSANPVHPLHIGSGR 150 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 +V+GDT + L+ + G+ V+R +Y+ND G Q+ LA V Sbjct: 151 NSVIGDTYSRLLKYLGFNVSRLFYVNDLGRQVAVLAYGV 189 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 85/394 (21%), Positives = 154/394 (39%), Gaps = 73/394 (18%) Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDP--SPIRDIIDNLARQGY--VYEGILPPPKS 296 ++K + L +N+ D F D+ D R ++D + GY V +G + + Sbjct: 385 VLKGFLETLSKINVSFDGF----DYESSDEVLELSRKVVDRVIESGYARVVDGAVEVDLN 440 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY-V 355 K + D + + LF G + R +SDG+ Y D+AY K+ R +Y V Sbjct: 441 KAGE--DHEYVKNLFHPDQPGRFIIR---RSDGTTLYVTRDIAYTLMKFTRHRAEKVYNV 495 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR------------ 403 + + S K+L+AV + ++ N++ ++ GM +MS R Sbjct: 496 IAVEQSRAQKQLKAVLYLLGYRREADNLVHFSYEMVHLKGM--RMSGRRGIYYTVDELLM 553 Query: 404 ---------------------AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 GD++ LR V + ++ R ++L + ++L FD ++ Sbjct: 554 DMENSIIGKHLEETGGFKREATGDYMELRSVAGILAVNNTRALLLSVEPGKVLSFDPGRI 613 Query: 443 KEQSKENPVF----YVQYAYARCRSIFRQAKDIFPDLDFDLFP-------RNVIPQESEF 491 VF V Y R +SI R+ + P D + ++ +E F Sbjct: 614 -------GVFEHGITVTYGLVRAQSILRRLWGVEPLDDASIVKTRGLDTLSSLKQEELGF 666 Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551 + E QL+ L YP V+ A P +L Y L+ F+ R + R + Sbjct: 667 NVEEKQLLEALVGYPMVLREAYEYMRPDRLLEYASGLSLAFN------RMYEKHRVINEP 720 Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +R+ L AV +++ +I+G P + Sbjct: 721 DPVRKNIRVLLTIAVLLVLSDLADIMGFHKPRRL 754 >gi|320106629|ref|YP_004182219.1| arginine--tRNA ligase [Terriglobus saanensis SP1PR4] gi|319925150|gb|ADV82225.1| Arginine--tRNA ligase [Terriglobus saanensis SP1PR4] Length = 661 Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 77/343 (22%), Positives = 148/343 (43%), Gaps = 44/343 (12%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 L +I E+P G ++ A L++ L P IA+ + ++ + SV IAG G+ Sbjct: 25 LAQIAAEQPPKTELGEVALPVAFELAKRLKKAPRVIAQELADEMRGVEGIASVDIAGAGY 84 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 +NL + L + ++ + ++ G G ++ +E S NP HVGH R A++GD Sbjct: 85 LNLKFDRASLVRAMA------VGQHADVGGLGFRL-VEHTSINPNKAAHVGHLRNAILGD 137 Query: 149 TLASLMA----FSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL----PEGY 200 T L+ +GY V + YI++ G Q+ + + + ++L + S L +G Sbjct: 138 TFQRLLRKDDFKNGYGVGVQNYIDNTGVQVADVVVGLTHLEGKSLADVRSLLIDLKAKGQ 197 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWL---------------PIVKDYSVQAMMKII 245 YL + ++ Y+ + + K L I+ D A+++ Sbjct: 198 RIDYYLWDLYARVSRWYTEDPADIGARKELRLATLHLIEEGGNDTAIIADIVATAVIERH 257 Query: 246 RDDLKALNIQHDIFISEDD---FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 + ++ L+I++D E + H D AR + +G+L + C Sbjct: 258 LETMQRLDIEYDFLPRESEILHLHFWDA----------ARALMIEKGVLYEETEGKNKGC 307 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345 + R+ ++ DD + +++S+G+ TY D+AY K+ Sbjct: 308 WVMRRPGTEQTEGTDDDA-KVIVRSNGTVTYVGKDIAYHLWKF 349 Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 6/121 (4%) Query: 416 EVGSDSVRFMMLWRKNSELLDFDFC-KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 ++ ++R+ ML + ++ FD + + + P YVQYA R +I R+A + D Sbjct: 498 QIAVGALRYFMLKFTRNTVIAFDLRDALSFEGETGP--YVQYAIVRAGNILRKAG-VEQD 554 Query: 475 LDFDLFPR-NVIPQ-ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 D+ +V Q + + + S ++ + + VIE A +A EP LA Y + LA F Sbjct: 555 ASLDVLADVDVAAQIDGDENNSVWEIWLMASRLTTVIEAAIVAAEPALLARYAFQLAQAF 614 Query: 533 H 533 + Sbjct: 615 N 615 >gi|229102811|ref|ZP_04233507.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock3-28] gi|228680596|gb|EEL34777.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock3-28] Length = 562 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 76/289 (26%), Positives = 128/289 (44%), Gaps = 55/289 (19%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHS---------------GYVKRL 367 KSDG+ Y DL Y + Y FD +YV+G + S +V + Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--AFDKALYVVGPEQSLHFNQFFTVLKKLGYNWVDGM 357 Query: 368 EAV--------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 E V +S +K ++ +LL E++ D + ++ + V +VG Sbjct: 358 EHVPFGFILKDGKKMSTRKGRV-ILLEEVLEEAIDLAKQNIEEKNPNLKQKEEVAKQVGV 416 Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 +V F L KN + + +F +K + + P YVQY +AR SI R+ F Sbjct: 417 GAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSILRKESVEFETCT 472 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 F L D ++ L ++P+VIE A EP ++ Y+ D+A F+ ++ Sbjct: 473 FALK-----------DDHSWSVVKLLNKFPQVIEAAFNKNEPSIISKYVLDVAQSFNKYY 521 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +R ++ + K + RL LV+AV ++ GL ++GVE+P EM Sbjct: 522 GN------VRILEESKEKDS--RLVLVYAVTVVLKEGLRLLGVEAPEEM 562 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 ++ ++ L I + +ILD +IE P+ G + L++ P IA Sbjct: 2 EYKTQFAKSLSNIFVNELTQNQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + I ++ DP V G ++N++ + + +L +I+ EYG+N G V Sbjct: 59 KEIAEKVN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTILAKKEEYGQNYFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|229074894|ref|ZP_04207903.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock4-18] gi|228708231|gb|EEL60395.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock4-18] Length = 562 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 76/289 (26%), Positives = 128/289 (44%), Gaps = 55/289 (19%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHS---------------GYVKRL 367 KSDG+ Y DL Y + Y FD +YV+G + S +V + Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--AFDKALYVVGLEQSLHFNQFFTVLKKLGYNWVDGM 357 Query: 368 EAV--------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 E V +S +K ++ +LL E++ D + ++ + V +VG Sbjct: 358 EHVPFGFILKDGKKMSTRKGRV-ILLEEVLEEAIDLAKQNIEEKNPNLKQKEEVAKQVGV 416 Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 +V F L KN + + +F +K + + P YVQY +AR SI R+ F Sbjct: 417 GAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSILRKESVEFETCT 472 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 F L D ++ L ++P+VIE A EP ++ Y+ D+A F+ ++ Sbjct: 473 FALK-----------DDHSWSVVKLLNKFPQVIEAAFNKNEPSIISKYVLDVAQSFNKYY 521 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +R ++ + K + RL LV+AV ++ GL ++GVE+P EM Sbjct: 522 GN------VRILEESKEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 562 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 ++ ++ L I + ++LD +IE P+ G + L++ P IA Sbjct: 2 EYKTQFAKSLSNIFVNELTQNQMLD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + I ++ DP V G ++N++ + + +L +I+ EYG+N G V Sbjct: 59 KEIAEKVN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTILAKKEEYGQNYFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|145349392|ref|XP_001419119.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579350|gb|ABO97412.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 652 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%) Query: 88 FINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++NL ++ P + ++ G ++G KG +V IE S+NP P+H+G+ R ++ Sbjct: 36 YVNLKMNRPMVFEATMKAVARRGGKFGHTDAAKGKRVIIEHTSSNPNAPLHIGNLRNVMI 95 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 G L+ +M G++V +Y+ND GAQI AL+ Sbjct: 96 GAHLSRMMKACGHDVKEAFYVNDLGAQIGLTALA 129 >gi|255079666|ref|XP_002503413.1| predicted protein [Micromonas sp. RCC299] gi|226518679|gb|ACO64671.1| predicted protein [Micromonas sp. RCC299] Length = 481 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 1/94 (1%) Query: 88 FINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++NL++ + R ++ ++ G ++G G +V IE S+NP P+H+G+ R ++ Sbjct: 11 YLNLFVDRARVFRLVIRAVSAQGDKFGHTKAAGGKRVIIEHTSSNPNAPLHIGNLRNVMI 70 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 G LA + A G+ V + +Y+ND GAQI AL+ Sbjct: 71 GAHLAKMQAACGFAVKQAFYVNDLGAQIGLTALA 104 >gi|163939982|ref|YP_001644866.1| arginyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] gi|163862179|gb|ABY43238.1| arginyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] Length = 562 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 82/302 (27%), Positives = 129/302 (42%), Gaps = 81/302 (26%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG+ Y DL Y + YE FD +YV+G + S + Q Sbjct: 300 KSDGATIYATRDLTAALYRQNTYE--FDKALYVVGPEQSLHFN--------------QFF 343 Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416 +L +L + DGM P KMS R G I L V++E Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRIILLEEVLEEAVALAEQNIEEKNPN 403 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463 VG +V F L KN + + +F +K + + P YVQY +AR S Sbjct: 404 LKQKEDVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ F F L + ++ S ++L L ++P+VIE A EP ++ Sbjct: 460 ILRKESVEFETCTFAL--------KDDYSWSVVKL---LNKFPQVIEAAFNKNEPSTISK 508 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+ D+A F+ ++ + +R ++ + K + RL L +AV ++ GL ++GV +P Sbjct: 509 YVLDVAQAFNKYYGN------VRILEESEEKES--RLALAYAVTVVLKEGLRLLGVGAPE 560 Query: 584 EM 585 EM Sbjct: 561 EM 562 Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 ++ ++ L I + +ILD +IE P+ G + L++ P IA Sbjct: 2 NYKTQFAKSLSNIFTNELTKNQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V G ++N++ + + K+L +I+ EYG+N G V Sbjct: 59 KELAEKLN-DPFFTKVEAVGP-YVNVFFNRETVSDKVLKTILAEKEEYGQNHFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|228958480|ref|ZP_04120200.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pakistani str. T13001] gi|228801107|gb|EEM48004.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pakistani str. T13001] Length = 562 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 81/302 (26%), Positives = 126/302 (41%), Gaps = 81/302 (26%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG+ Y DL Y + Y GFD +YV+G + S + Q Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--GFDKALYVVGPEQSLHFN--------------QFF 343 Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416 +L +L + DGM P KMS R G I L V++E Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPN 403 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463 VG +V F L KN + + +F +K + + P YVQY +AR S Sbjct: 404 LKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ F F L D ++ L ++P++I A EP ++ Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWSVVKLLNKFPQIIGAAFNKNEPSIISK 508 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+ D+A F+ ++ + +R ++ + K + RL LV+AV ++ GL ++GVE+P Sbjct: 509 YILDVAQSFNKYYGN------VRILEESKEKDS--RLALVYAVTVVLKEGLRLLGVEAPE 560 Query: 584 EM 585 EM Sbjct: 561 EM 562 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ + L I +K+ILD +IE P+ G + L++ P IA Sbjct: 2 DYKMQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKAPALIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + + DP V G ++N++ + + +L +I+ E+G+N G V Sbjct: 59 KEVAEKFN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTILAEKEEFGQNHFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|66806687|ref|XP_637066.1| arginyl-tRNA synthetase [Dictyostelium discoideum AX4] gi|60465463|gb|EAL63548.1| arginyl-tRNA synthetase [Dictyostelium discoideum AX4] Length = 738 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 126/605 (20%), Positives = 247/605 (40%), Gaps = 124/605 (20%) Query: 78 VDSVFIAGKGFINLYLSPSYLRKIL----------SSIVVSGIEY------------GRN 115 ++ + ++ KG +NL +S YL IL S ++ +++ + Sbjct: 153 IEKLELSNKGHLNLRVSDEYLTTILKLWINPNEDKSKFLIDNLKFQDDVNLNEMEKENKL 212 Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175 L + KV ++F S N + +HVGH R +G+++ ++ + G++V R + D G + Sbjct: 213 LPIRSKKVLVDFASPNMSKELHVGHLRSIALGESICRILEYMGHDVERISHAGDFGTPLG 272 Query: 176 TL---ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232 + +L Y + + + E P KEL++ Y++ ++ Sbjct: 273 IVLAHSLETNADYLKHIQDPTCKDNEPIIP------TPKELSELYTTSKKRTKSDEQFSK 326 Query: 233 VKDYSVQAMMK--IIRDDLKALNIQ------HDIFISEDDFHRGDPSPIRDIID-NLARQ 283 ++ K I D + I +D ++S + R + + ++D N+ + Sbjct: 327 RTLWTAAEFQKGPPIYDKVSGEQIGGSDPIVYDAWLSLCEASRIGFNKVFQMLDINVNER 386 Query: 284 G-YVYEGILPPPKSKTTQK-----CDMDRKQLLFRSTMVGD-DVDRPLLKSDGSYTYFAA 336 G Y +LP T+ D RK + T D V + KSDG+Y Y Sbjct: 387 GESFYRDMLPGVIEDLTKMGFVDISDDGRKCIFLDKTKCKDSQVPVVVQKSDGAYLYATT 446 Query: 337 DLAYFKCKYERGFDNMIYVMG---SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR--- 390 D+A K + E G + +I + SDH V ++ A ++ K+ +++ L +VR Sbjct: 447 DIAAIKHRVENGKEWVIVITDDSQSDHFQQVFKIAEDANWLNRKQTRVDHLSFGVVRGPN 506 Query: 391 ----LYRDGMP----------IKMSKRA------------------GDFITLRHVVD--- 415 RDG P I+ SK+A + + + ++D Sbjct: 507 GQKLSSRDGNPIALIDLLQESIERSKQATSLSKSFTRSEKLDITQNANNVEINRMLDTFE 566 Query: 416 -------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456 ++G ++++ L +N+ + F + + K N Y+ Y Sbjct: 567 NNNNDDNNNETTIDEKHFLKIGMGALKYYDLAHRNNPYV-FSYDSIL-SFKGNTSIYILY 624 Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 Y R ++ R+A F L+ + N+I + EF E L+ ++ + V++ + Sbjct: 625 CYTRISTLLRRAN--FDGLNLN---PNLI-EFKEFTEKERNLVFIMSRFSDVMKGTEQSL 678 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 +P + YL+DLA+ FH + + + N R+ RL + AV I+++GL++ Sbjct: 679 KPGFICDYLWDLANSFHQFYETEK-------IIGNERQ--DQRLFICLAVQRILSTGLHL 729 Query: 577 IGVES 581 +GVE+ Sbjct: 730 LGVET 734 >gi|324326226|gb|ADY21486.1| arginyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 562 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 81/302 (26%), Positives = 125/302 (41%), Gaps = 81/302 (26%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG+ Y DL Y + Y FD +YV+G + S + Q Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--AFDKALYVVGPEQSLHFN--------------QFF 343 Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416 +L +L + DGM P KMS R G I L V++E Sbjct: 344 TVLKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIDLAKQNIEEKNPN 403 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463 VG +V F L KN + + +F +K + + P YVQY +AR S Sbjct: 404 LKQKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ F F L D ++ L ++P VIE A EP ++ Sbjct: 460 ILRKESVEFETCTFALK-----------DDHSWNIVKLLNKFPEVIEAACNKNEPSVISK 508 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+ D+A F+ ++ + +R ++ + K + RL LV+AV ++ GL ++GV++P Sbjct: 509 YVLDVAQSFNKYYGN------VRILEESEEKDS--RLALVYAVTVVLKEGLRLLGVDAPE 560 Query: 584 EM 585 EM Sbjct: 561 EM 562 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ ++ L I +K+ILD +IE P+ G + L++ P IA Sbjct: 2 DYKTQFAESLSNIFTNELTQKQILD--LIETPKQDEFGD-AAFPCFSLAKQYEKSPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V G ++N++ + + ++L +I+ EYG+N G V Sbjct: 59 KEVAEKLS-DPFFTKVEAVGP-YVNVFFNRETVSDEVLKTILAEKEEYGQNHFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|227501367|ref|ZP_03931416.1| arginine--tRNA ligase [Anaerococcus tetradius ATCC 35098] gi|227216466|gb|EEI81876.1| arginine--tRNA ligase [Anaerococcus tetradius ATCC 35098] Length = 565 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 7/128 (5%) Query: 53 LSRPLGLDPLTIAELIVARIKIDP--DVDSVFIAGKGFINLYLSPS-YLRKILSSIVVSG 109 L+R + +P IAE + + + + ++++ ++N Y+ + + L+ I+ Sbjct: 46 LARTMRKNPAIIAEELASSLDLKAFEKIENL----NAYVNFYVDRKMFEEETLNEIIEKK 101 Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169 +Y + IGKG + +EF S N P H+GH R V+GD L ++ F GY YI D Sbjct: 102 EKYASSDIGKGKNIVVEFSSVNIAKPFHIGHIRSTVIGDALRNIHKFLGYNTIASNYIGD 161 Query: 170 AGAQINTL 177 G Q T+ Sbjct: 162 YGTQFGTM 169 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 63/286 (22%), Positives = 121/286 (42%), Gaps = 42/286 (14%) Query: 324 LLKSDGSYTYFAADLAY-FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA---------- 372 ++KS+GS Y D+A K FD +YV+ + + + +L A+ Sbjct: 298 VIKSNGSSAYITRDIATAINRKKVYDFDKNLYVVATQQNLHFDQLFAILKLMGYDFYKDC 357 Query: 373 -------------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 +S +K Q+ V L +++ + M R + + VG Sbjct: 358 KHVSFGMVSLKDQTLSTRKGQV-VFLEDVLNKAIEKTKEVMESRHTEIEDIEETAKIVGI 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 +V+F L+ + FD+ +V E Y+QY YAR +S+ R+A F + Sbjct: 417 GAVKFQELYNNRIKDYVFDWDEVLNFDGETGP-YIQYTYARAKSVLRKAG--FEKAEKMN 473 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 F + I + EF L+ LA + ++ A EP + +L ++A F+ ++ Sbjct: 474 FTK--ITSDEEF-----ALVKSLANFKDIVIKACEKYEPSLITRHLTEIAKNFNKFYNTC 526 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++++ RL L +A + +I GL ++G+++ +M Sbjct: 527 Q-------VNVEDKEVKEERLALTYASSLVIKIGLGLLGIKTVEKM 565 >gi|218883811|ref|YP_002428193.1| Arginyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n] gi|218765427|gb|ACL10826.1| Arginyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n] Length = 758 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 57/100 (57%), Gaps = 9/100 (9%) Query: 87 GFINLYLS-----PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 G+IN+ + S++ +LS ++S + IG G + +E SANP P+H+G Sbjct: 98 GYINVEVDYSTIFKSFMESLLSGRLLSELRS----IGFGKNIVVEHTSANPVHPLHIGSG 153 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 R +V+GDT A L+ + G+ V R +Y+ND G Q+ LA V Sbjct: 154 RNSVIGDTYARLLKYLGFNVVRLFYVNDLGRQVAVLAYGV 193 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 87/379 (22%), Positives = 156/379 (41%), Gaps = 63/379 (16%) Query: 210 GKELADKYSSELLNF-----PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 G E A++ SE++ PE + L ++D S + I + L+ +NI D F D Sbjct: 356 GYEDAEREISEIMKRAEGGDPEVRRL--LRDISGNVLRGFI-ETLEKINIGFDGF----D 408 Query: 265 FHRGDP--SPIRDIIDNLARQGY--VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 + D + I+D + + Y + +G + +K ++ R LF G + Sbjct: 409 YESSDEVLELSKGIVDEVVKTAYTRIVDGAVEVDLNKAGEENKYVRS--LFHPDQPGRFI 466 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY-VMGSDHSGYVKRLEAVAAAVSEKKA 379 R + DG+ Y D+AY K++R +Y V+ + + K+L+A+ + K+ Sbjct: 467 IR---RRDGTTLYVTRDIAYTLIKFKRYNAERVYNVIAVEQARAQKQLKAILYLLGYKRE 523 Query: 380 QINVL--LCELVRLY------RDGMPIKM-----------------------SKRAGDFI 408 N++ E+V L R G+ M + G +I Sbjct: 524 ADNLVHFSYEMVHLKNMRMSGRRGIYYTMDELLMDMEDSIVARGIEGSSSFKQEAEGKYI 583 Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 L + ++VR ++L + ++L FD K+ S E+ + V Y R +SI R+ Sbjct: 584 DLMETARMLAVNNVRALLLSVEPGKVLSFDPSKIG--SFEHGIT-VTYGLVRAQSILRKL 640 Query: 469 KDIFPDLDFDLFPRNVI-------PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 + P ++ + I + EF+T E Q++ L YPRV+ A P KL Sbjct: 641 WGLEPLVEINAVRSRSIEIYTSLNTESMEFNTEEKQILEMLVGYPRVLREAYEYMRPDKL 700 Query: 522 AFYLYDLASVFHGHWSHGR 540 Y +L+ F+ + R Sbjct: 701 LEYAVELSLFFNRMYEKHR 719 >gi|282865622|ref|ZP_06274673.1| arginyl-tRNA synthetase [Streptomyces sp. ACTE] gi|282559666|gb|EFB65217.1| arginyl-tRNA synthetase [Streptomyces sp. ACTE] Length = 606 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 74/296 (25%), Positives = 119/296 (40%), Gaps = 51/296 (17%) Query: 323 PLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 PL+ K++G Y Y A DL+ + + + D ++YV+ + S + K + A Sbjct: 329 PLIVKKTNGGYGYAATDLSAIRDRVQGLKADTLLYVVDARQSLHFKMVFETARRAGWLNE 388 Query: 380 QINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 + L L +DG P K R G + L ++DE Sbjct: 389 DVTAHQLAFGTVLGKDGKPFKT--REGTTVRLEDLLDEAVERATAVVREKAEKVGLSEEE 446 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 VG +V++ L FD ++ + + V Y+QYAYAR RSI R+A Sbjct: 447 IVENGRYVGVGAVKYADLSTSAVRDYKFDLDQMVSLNGDTSV-YLQYAYARIRSILRKAG 505 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 D P E E +E L +HL ++ V+ EP+KLA YLY LA Sbjct: 506 DANP----------AAHPELELAPAERALGLHLDQFGAVLSEVAEGYEPHKLAAYLYQLA 555 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 S + + N ++ RL LV A ++ G+ ++G+ +P + Sbjct: 556 SHLTTFYDQCQ-----VLSDDNPAEVVENRLFLVELTARTLHQGMRLLGIRTPERL 606 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/138 (25%), Positives = 64/138 (46%) Query: 45 LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104 N + L++ L +P +A + + + + ++G GF+N+ L+ + + L++ Sbjct: 58 FQANGILALAKKLKGNPRELAAKVTDTLPSGELIKDIEVSGPGFLNITLTDRAITETLAA 117 Query: 105 IVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTRE 164 G G + I++ N MHVGH R AV+GD + ++ F+G V R Sbjct: 118 RAADGDRLGVPVKADAGTTVIDYAQPNVAKEMHVGHLRSAVIGDAMVQILEFTGETVVRR 177 Query: 165 YYINDAGAQINTLALSVF 182 ++I D G Q L +F Sbjct: 178 HHIGDWGTQFGMLIQYLF 195 >gi|169835629|ref|ZP_02868817.1| arginyl-tRNA synthetase [candidate division TM7 single-cell isolate TM7a] Length = 596 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 67/146 (45%), Gaps = 3/146 (2%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP--DVDSVFIAGK-GF 88 + + P + A LS+ L P I E I + D D A + GF Sbjct: 30 VTVTVPTQLDKADFVCDVAFRLSKILHTAPYVIGESIAKEVNSTQLQDGDYTLEAARPGF 89 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 IN++L+ L KIL I + YGRN I G + IE S NP MH+GH R ++G Sbjct: 90 INVHLTDVSLSKILIHINDTNQNYGRNDILAGQRWVIEHTSPNPNKAMHIGHLRNNLIGM 149 Query: 149 TLASLMAFSGYEVTREYYINDAGAQI 174 +A++ A+ G V R+ N+ G I Sbjct: 150 AVANIAAYCGASVVRDCIDNNRGIAI 175 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 71/290 (24%), Positives = 131/290 (45%), Gaps = 54/290 (18%) Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKK 378 D +LKSDG+ Y D+A K K R D + +V+G + S +K++ A+ + K Sbjct: 326 DTIVLKSDGTSLYITQDIALTKLKKNRFKADKLFWVIGPEQSLAMKQVFAICEQLGIGKL 385 Query: 379 AQINVLLCELVRLY--RDGMPIKMSKRAGDFITLRHVVDEV------------------- 417 + L L+ + + G KMS R G+ + + +++DEV Sbjct: 386 SDFTHLPYGLISIVDKQTGAKKKMSSRDGNTLYIDNLLDEVRDSLLNSGRDYDEKTADLI 445 Query: 418 GSDSVRFMML--WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 D+V+F +L R + +LD + K + Y+ Y +R S+ + Sbjct: 446 AIDAVKFAVLKPSRNSDSVLDI---QESINLKGDSGIYILYTLSRINSLLSKYTG----- 497 Query: 476 DFDLFPRNVIPQESEFDTS--ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 DL +PQ E S E ++++ +A +P+ I +A + P L Y+ D+A VF+ Sbjct: 498 --DL----TLPQSEELALSSEERKIVMLMAYFPKRITDALESYAPNILIEYILDIAHVFN 551 Query: 534 GHWSHGRENPRLRFVQ---ANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 ++ + +F+ AN RK +L L ++A +I + L ++G++ Sbjct: 552 SIYA------KEQFISEDVANTRK----KLYLSKSIAIVITNALKLLGIK 591 >gi|229161178|ref|ZP_04289165.1| Arginyl-tRNA synthetase 2 [Bacillus cereus R309803] gi|228622274|gb|EEK79113.1| Arginyl-tRNA synthetase 2 [Bacillus cereus R309803] Length = 562 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 78/291 (26%), Positives = 125/291 (42%), Gaps = 59/291 (20%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG+ Y DL Y + Y FD +YV+G + S + + V + K Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--AFDKALYVVGPEQSLHFNQFFTVLKKLGYKWVD-G 356 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------V 417 + + +DG KMS R G I L V++E V Sbjct: 357 MEHVPFGFILKDGK--KMSTRKGRVILLEEVLEEAIGLAKQNIEEKNPNLKQKEEVAKQV 414 Query: 418 GSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 G +V F L KN + + +F +K + + P YVQY +AR SI R+ F Sbjct: 415 GVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSILRKESVEFET 470 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 F L D ++ L ++P+VIE A EP ++ Y+ D+A F+ Sbjct: 471 CTFALK-----------DDHSWSVVKLLNKFPQVIEAAFHKNEPSIISKYVLDVAQSFNK 519 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + +R ++ + K + RL LV+AV ++ GL ++GV++P EM Sbjct: 520 YYGN------VRILEESEEKDS--RLALVYAVTVVLKEGLRLLGVDAPEEM 562 Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 ++ ++ L I + +ILD +IE P+ G + L++ P IA Sbjct: 2 EYKTQFAKSLSNIFTNELTQNQILD--LIETPKQDDFGD-AAFPCFSLAKQYKKSPALIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V G ++N++ + + +L +I+ EYG+N G V Sbjct: 59 KEVAEKLD-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTILAEKGEYGQNHFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|198456442|ref|XP_002136329.1| GA24005 [Drosophila pseudoobscura pseudoobscura] gi|198142680|gb|EDY71404.1| GA24005 [Drosophila pseudoobscura pseudoobscura] Length = 282 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 74/141 (52%), Gaps = 8/141 (5%) Query: 42 HGHLSTNAAMILSRPL---GLD--PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS 96 +G N AM L++ + G++ P IA + + P ++ + + G GF+N+YLS Sbjct: 114 YGDYQCNNAMGLAKKMKEMGVNRTPRDIANELQKCCPLSPIINKLEVGGAGFVNVYLSKD 173 Query: 97 YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 Y + L +I+ GI+ R L +V ++F S N MHVGH R ++G+++ L+ F Sbjct: 174 YAAQSLKNILRHGIKPPRVL---KRRVLVDFSSPNIAKQMHVGHLRSTIIGESVCRLLEF 230 Query: 157 SGYEVTREYYINDAGAQINTL 177 ++V R ++ D G Q L Sbjct: 231 LQHDVIRINHLGDWGTQFGML 251 >gi|239929677|ref|ZP_04686630.1| arginyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672] gi|291437997|ref|ZP_06577387.1| arginyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672] gi|291340892|gb|EFE67848.1| arginyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672] Length = 591 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 72/297 (24%), Positives = 125/297 (42%), Gaps = 55/297 (18%) Query: 323 PLL--KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 PL+ KSDG + Y A DL+ + + + D ++YV+ + + + + + A Sbjct: 316 PLIVQKSDGGFGYAATDLSAIRDRVFHLKADTLLYVVDARQALHFRMVFETARRAGWLND 375 Query: 380 QIN-VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 + V L L +DG P K RAG+ + L ++DE Sbjct: 376 DVKAVQLAFGTVLGKDGKPFKT--RAGETVRLVDLLDEAIERASAVVREKAQDLSEEEIA 433 Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VG +V++ L + FD ++ + + V Y+QYAYAR RSI R+A Sbjct: 434 ERGTQVGIGAVKYADLSTSANRDYKFDLDQMVSLNGDTSV-YLQYAYARIRSILRKA--- 489 Query: 472 FPDLDFDLFPRNVIPQ---ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 P V P E +E L +H+ + + A P+KLA YLY L Sbjct: 490 ---------PEGVRPAAHPELSLHEAERALGLHVDAFAETVAEAAREYAPHKLAAYLYQL 540 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 AS++ + + ++A + + RL L A+ ++ G+ ++G+ +P + Sbjct: 541 ASLYTSFYD------KCPVLKAESPEQVANRLFLCDVTAATLHRGMALLGIRTPERL 591 Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 15/141 (10%) Query: 45 LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104 N + L++ +P +A +VA + + V ++G GF+N+ ++ R I+ + Sbjct: 41 FQANGILALAKKAKANPRELAAEVVAHVVTGDVIKDVEVSGPGFLNITITD---RAIIEN 97 Query: 105 IVVS--------GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 + G+ + GT V I++ N MHVGH R AV+GD++ L+ F Sbjct: 98 LAARYADDTGRLGVPFAER---PGTTV-IDYAQPNVAKEMHVGHLRSAVIGDSVVQLLEF 153 Query: 157 SGYEVTREYYINDAGAQINTL 177 +G V R ++I D G Q L Sbjct: 154 TGENVIRRHHIGDWGTQFGML 174 >gi|291459323|ref|ZP_06598713.1| arginine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262] gi|291418577|gb|EFE92296.1| arginine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262] Length = 634 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 134/620 (21%), Positives = 245/620 (39%), Gaps = 107/620 (17%) Query: 29 LDRIVIE-RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID-----PDVDSVF 82 L R+ + RP C + +N AM ++ +P+ IA+ + R++ P V Sbjct: 59 LGRVTVSNRPDLCEY---QSNGAMAGAKRYHKNPMEIAKELAERLREQGSTEVPIFRRVE 115 Query: 83 IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG----KGTKVNIEFVSANPTGPMHV 138 GF+NL L ++L L+ + + +G +G ++ +++ AN P+HV Sbjct: 116 AVRPGFLNLDLGEAFLSGYLNEMNA------KEKLGLDPKEGKRIIVDYGGANVAKPLHV 169 Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198 GH R AV+G+ L L G + ++ D G Q+ + + R S+L E Sbjct: 170 GHLRSAVIGEALKRLALRMGNHAIGDVHLGDWGLQMGLIIAELSDRGLSCEDLTLSELEE 229 Query: 199 GYYPGVYLKHVGKELADKYSSELLNFPE--EKWLPIVKDYSV---------QAMMKIIRD 247 YP K K+ + ELLN P+ ++ K+ + +M++ + Sbjct: 230 -IYPAASKKAKEKDA----NGELLN-PDFAKRAHEATKELQSGDKACRRIWEKIMELSKA 283 Query: 248 DLK----ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 DLK AL++ +++ E D +P I +I+ L R+G YE Sbjct: 284 DLKKNYDALDVHFELWKGESD---AEPY-IPGLIEELVRKGLAYE--------------- 324 Query: 304 MDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGS 358 + L+ GD + P + KSDG+ Y +DL E+ F D IY+ S Sbjct: 325 -SQGALVVDIAEPGDKKELPPCMIRKSDGASLYATSDLGTI-LDREKNFHLDRYIYIADS 382 Query: 359 DHSGYVKRLEAVAAAVS-----------------------EKKAQINVLLCE-LVRLYRD 394 S + + VA K + VL E L+R R+ Sbjct: 383 RQSLHYTQFFRVAKKAGFVPPDTELDYIGFGTMNGKDGRPFKTREGGVLRLELLIRDTRE 442 Query: 395 GMPIKMSKRAGDFITLR---HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 + ++ G+ ++ R D V ++++ L + + FD K + N Sbjct: 443 SVLARIRASRGEEMSGREAEETADVVALAALKYGDLQNQATRDYVFDLEKFT-AFEGNTG 501 Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF------DTSELQLIVHLAEY 505 Y+ Y R SI R+ + ++F + SEF + S +L + LA + Sbjct: 502 PYILYTIVRIASILRKYAEA-KGMEFHGAEDWIREHGSEFEIRIMEEKSGYELQLSLARF 560 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 ++ A P+K+ Y+Y L++ F+ + ++ + + + RL + Sbjct: 561 QDEMKAAWKELAPHKICSYIYKLSNDFNSFYHE------VKILAEPDEEKKKSRLATLIL 614 Query: 566 VASIINSGLNIIGVESPNEM 585 I+N ++ +G +P M Sbjct: 615 SWKILNDCIHTLGFSAPERM 634 >gi|228927257|ref|ZP_04090319.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229121744|ref|ZP_04250965.1| Arginyl-tRNA synthetase 2 [Bacillus cereus 95/8201] gi|228661660|gb|EEL17279.1| Arginyl-tRNA synthetase 2 [Bacillus cereus 95/8201] gi|228832404|gb|EEM77979.1| Arginyl-tRNA synthetase 2 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 562 Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 83/300 (27%), Positives = 128/300 (42%), Gaps = 77/300 (25%) Query: 326 KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 KSDG+ Y DL A + FD +YV+G + S + Q + Sbjct: 300 KSDGATIYATRDLTAALYRQNTFSFDKALYVVGPEQSLHFN--------------QFFTV 345 Query: 385 LCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE----------------- 416 L +L + DGM P KMS R G I L V++E Sbjct: 346 LKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIDLAKQNIEEKNPNLK 405 Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIF 465 VG +V F L KN + + +F +K + + P YVQY +AR SI Sbjct: 406 QKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSIL 461 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 R+ F F L + ++ S ++L L ++P+VIE A EP ++ Y+ Sbjct: 462 RKESVEFETCTFAL--------KDDYSWSVVKL---LNKFPQVIEIAFNKNEPSVISKYV 510 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 D+A F+ ++ + +R + N K + RL LV+AV ++ GL ++GVE+P EM Sbjct: 511 LDVAQSFNKYYGN------VRILDENAEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 562 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ L I +K+ILD +IE P+ G + L++ P IA Sbjct: 2 DYKMHFAESLSNIFTNELTQKQILD--LIESPKQDEFGD-AAFPCFSLAKQYKKAPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V G ++N+Y + + +L +I+ EYG+N G V Sbjct: 59 KEVAQKLS-DPFFTKVEAVGP-YVNVYFNRDTVSDAVLKTILAEKEEYGQNYFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|258510427|ref|YP_003183861.1| arginyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477153|gb|ACV57472.1| arginyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 565 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 128/591 (21%), Positives = 234/591 (39%), Gaps = 89/591 (15%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P + A G L+ +R + +P+ IAE + R++ V+S A KGF+N+ Sbjct: 26 MLEYPPNPALGDLAL-PCFPFAREMRKNPVQIAEELAERVRQVDGVESAH-AEKGFLNIR 83 Query: 93 LSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L+ S + +++ + S + G+G I++ S N P VGH R ++G L Sbjct: 84 LARSQFAERVVGQAIASVHDLFSEERGRGRTAVIDYSSPNIAKPFGVGHLRSTIIGHALK 143 Query: 152 SLMAFSGYEVTREYYINDAGAQIN-TLALSVFWRYQQALYNNDSDLPEGYYPGVYLK-HV 209 +M G+ V ++ D G Q +A + W + + + P +Y++ H Sbjct: 144 RMMREDGWRVEGVNHLGDWGTQFGKVIAAYLKWGSEDEVRKD----PVKELFRLYVRFHQ 199 Query: 210 GKELADKYSSELLNFPEEKWLPIVKDYSVQAM---MKIIRDDLKALNIQHDIFISEDDFH 266 E SS L W +++ +A I + L+A +D+ E + + Sbjct: 200 EAE-----SSPELEDEGRLWFKKLEEGDPEATRLWRWFIDESLRAFKQVYDLLGVEFEHY 254 Query: 267 RGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL----LFRSTMVGDD 319 G+ + I+ L +G + E + + D+ + + +S Sbjct: 255 IGESFYNDKMDAIVQELREKGLLVE-------DQGAEVVDLSAYGMPPCIIVKSDGTSIY 307 Query: 320 VDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 R L +D + F A D ++YV+G++ + +++ V + A Sbjct: 308 ATRDLAAADYRHHAFGA-------------DTLLYVVGAEQKLHFEQVFKVLELMGRDYA 354 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITL-----------RHVVDE------------ 416 + N + + + +G ++S R G + L R ++DE Sbjct: 355 K-NCVHVQFGLMKFNGQ--RLSTRRGHVVYLEDVLQKAIEETRAIIDEKNPGLENKDAIA 411 Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 VG +V F L +DF + V E YVQY +AR S+ R+A+ Sbjct: 412 RQVGVGAVIFNDLKTYRVHEVDFRYEDVLNFDGETGP-YVQYTHARASSVLRKAEADA-- 468 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 + E D +E LI LA+ +E A +P +A Y + F+ Sbjct: 469 -------AAKWAPDYEPDDAEWALIFLLAQANESLERAVDTYDPSVIARYALQMCHAFNR 521 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++P +QA+ T RL L AV + L ++G+E+P EM Sbjct: 522 FY---HDHP---ILQADEPART-SRLALTRAVREALAKSLYLLGIEAPEEM 565 >gi|163752874|ref|ZP_02159998.1| arginyl-tRNA synthetase [Kordia algicida OT-1] gi|161326606|gb|EDP97931.1| arginyl-tRNA synthetase [Kordia algicida OT-1] Length = 592 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 120/561 (21%), Positives = 214/561 (38%), Gaps = 108/561 (19%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCA 144 KGF+NL + SY + +G G K V +E+ S N P+H+GH R Sbjct: 79 KGFLNLVIDDSYYLNFFAE-ANKNDAFGHETSKAGDKAVMVEYSSPNTNKPLHLGHIRNN 137 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVFWRYQ--QALYNNDSDLPEGY 200 ++G ++A ++ SG +V + IND G I + LA F + Q+ L Y Sbjct: 138 LLGYSVAEIIKASGKKVYKTQIINDRGIHICKSMLAWQRFGNGETPQSTGLKGDKLVGNY 197 Query: 201 YPG---VYLKHVGKELADKYSSE--------LLNFPE--EKWLPIVKDYSVQAMMKIIR- 246 Y Y + + +A+ + + LL E KW D + A+ K + Sbjct: 198 YVAFDKAYKAEIAQLIAEGKTEDDAKKEAPILLEAQEMLRKWE--AGDEEIVALWKQMNQ 255 Query: 247 -------DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP---KS 296 + L + D E D + L + +V EG++ K Sbjct: 256 WVYDGFAETYTNLGVDFDALYYESDTY-------------LLGKDFVKEGLVSGVFYMKD 302 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL--AYFKCKYERGFDNMIY 354 + CD+ + L ++ +L+SDG+ Y D+ A + K MIY Sbjct: 303 DGSVWCDLTEEGL----------DEKIVLRSDGTAVYMTQDIGTAIQRVKDYPDIGGMIY 352 Query: 355 VMGSDHSGYVKRLEAVAAAVS-EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI----- 408 +G++ + K L + + E ++ L +V L KM R G + Sbjct: 353 TVGNEQDYHFKVLFLILKKLGFEWSKNLHHLSYGMVDLPSG----KMKSREGTVVDADDL 408 Query: 409 ------TLRHVVDE------------------VGSDSVRFMMLWRKNSELLDFDFCKVKE 444 T + + +E +G ++++ ML + + FD + Sbjct: 409 MQEMVDTAKQIANEKGKLDGYSEEEKNSIHNKIGLGALKYQMLKVDPKKRILFDPEDSID 468 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 + ++ F +Q Y R R+I R+A + D+ N+ E E +L+ L Sbjct: 469 FNGDSGPF-IQMMYVRTRAILRKA-----NFDYSEVITNI-----ELHEKEKELLKVLEN 517 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 YP VI+ A Q P +A Y +DL+ F ++ + + ++ + R+QL Sbjct: 518 YPTVIQTAASNQSPALIANYAFDLSKEFSSYYQ------MVSILGETDKAKKVFRVQLSK 571 Query: 565 AVASIINSGLNIIGVESPNEM 585 + I ++G++ P M Sbjct: 572 KIGDTIKLAFGLLGIQVPERM 592 >gi|261414873|ref|YP_003248556.1| arginyl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371329|gb|ACX74074.1| arginyl-tRNA synthetase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302325605|gb|ADL24806.1| arginine--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 570 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 142/577 (24%), Positives = 227/577 (39%), Gaps = 107/577 (18%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +I P D +HG+ T L++ L P IAE + A++++ + V A G++N + Sbjct: 26 LISVPPDTSHGNY-TIPCFSLAKTLRKAPKLIAEDLAAKVQLPAGLSKV-EAVNGYLNFF 83 Query: 93 LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + +L K L+ I G+EYG + G V I++ S N + H R ++G++LA Sbjct: 84 IDRGFLAKSTLNEIAAKGLEYG-HAASNGKVVCIDYSSPNIGKELAFHHLRSTMIGNSLA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 + +GY+V R ++ D G L + ++ L +++ L K Sbjct: 143 RIYKAAGYKVERINHLGDWGTAFGKL---IVMYLREKLPTDEATLN---------ALTVK 190 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD--------------LKALNIQHD 257 EL Y+S EE P ++D + A K+ + D LK L +D Sbjct: 191 ELNILYASFSKASKEE---PGLEDEARAAFTKLEQGDEFYRKLWTAFRAATLKELMRIYD 247 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 + D + G+ +E +P + +K + Q R ++ Sbjct: 248 MMGVGFDHYTGES---------------FFEDKIPAVLDELREKNLLVNSQE--RDVVML 290 Query: 318 DDVD-RPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371 D+ D P L KSDGS Y DLA Y K +Y FD +YV+ + + K++ V Sbjct: 291 DEFDLNPCLIRKSDGSTLYATRDLAAAIYRKKEY--NFDKCLYVVDLGQALHFKQVFHVL 348 Query: 372 AAVSEK--KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------------- 415 + + K ++ ++++ DG K R G LR V++ Sbjct: 349 KKMGREWYKDMYHIPFGVILQMV-DGKWEKGKTRTGTASLLRDVIEAAQKKILEFIDEKN 407 Query: 416 -----------EVGSDSVRFMMLWRKNSELLD--FDFCKVKE-QSKENPVFYVQYAYARC 461 ++G ++ F L KNS L D FD+ V + P YVQ A+ R Sbjct: 408 PGLENKELIARQIGISALTFNDL--KNSRLKDVRFDWDAVMSFEGDTGP--YVQNAHVRL 463 Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 SI R+A P D D D + LI LA+ I A EP L Sbjct: 464 CSIMRKAGYTVPVADVDYAQLT--------DDAAYSLINILAKKGEKILAAVKDDEPSVL 515 Query: 522 AFYLYDLASVFHGHWSHGR------ENPRLRFVQANN 552 A Y ++A H R E RL VQ+ Sbjct: 516 AQYALEIAEAAHKFIHEDRVLGSAEEKSRLFLVQSTQ 552 >gi|146304478|ref|YP_001191794.1| arginyl-tRNA synthetase [Metallosphaera sedula DSM 5348] gi|145702728|gb|ABP95870.1| arginyl-tRNA synthetase [Metallosphaera sedula DSM 5348] Length = 619 Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 89/383 (23%), Positives = 164/383 (42%), Gaps = 61/383 (15%) Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF-HRGD-PSPIRDIIDNLARQGYVYEG 289 IV+ Y V +++ R+ L LNI+ D F E D G+ S +R + + AR Y Sbjct: 269 IVRKY-VNHVLEGFRESLGRLNIEFDEFDYESDLLWSGEVKSVLRSALSSRARIEY---- 323 Query: 290 ILPPPKSKTTQKCDMDR--KQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCK 344 K T+ D+D+ + + + ++ P L +SDG+ Y D+AY K Sbjct: 324 -------KGTEALDLDKYLDDEVRKELRIPAGLEIPPLVLTRSDGTTLYTVRDIAYTIRK 376 Query: 345 Y-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403 + + +I V+ + +L A + + N++ + GM MS R Sbjct: 377 FLTSKAEQVINVIAEQQTVPQIQLRAALYLLGYPEMAKNLIHYSYSMVTLPGM--TMSGR 434 Query: 404 AGDFITLRHV--------------------VDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443 G +I+L V + E+ + ++R+ +L + + F+ KV Sbjct: 435 LGRYISLDEVYEKVKQAVEEKTKDRGNQVNIAEIVNSAIRYALLSVSADKPITFNVGKVT 494 Query: 444 EQSKENPVFYVQYAYARCRSIFRQ-AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 ++N Y+QY Y R +I + +I D+D+ + + +L++ + Sbjct: 495 -NFEQNSGPYLQYTYVRAYNILSKFTGEINLDVDY-----------GDLVGEKRRLLLAI 542 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 A++P +N+ + EP L YL LA F+ + + R +Q + K M RL L Sbjct: 543 AKFPETFKNSADSLEPELLVSYLRYLADTFNAWYD------KERVLQEQDEKKRMTRLNL 596 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 V V ++ +GL ++G+ S +M Sbjct: 597 VKGVEVVMRNGLRVLGISSLTKM 619 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 4/91 (4%) Query: 88 FINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 F+NL L + L ++ SS+ +YG + K ++ IE SANP P+H+GH R +++ Sbjct: 73 FLNLRLDETQLFMEVFSSM---DQDYGIEKVEKPKRIVIEHTSANPIHPLHIGHLRNSII 129 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTL 177 GD L L G+EV +Y+ND+G Q+ L Sbjct: 130 GDALVRLSRARGHEVISRFYVNDSGRQVAIL 160 >gi|149173497|ref|ZP_01852127.1| arginyl-tRNA synthetase [Planctomyces maris DSM 8797] gi|148847679|gb|EDL62012.1| arginyl-tRNA synthetase [Planctomyces maris DSM 8797] Length = 238 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 11/180 (6%) Query: 1 MYLFADFSSRLKNYLKEI--DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILS-RPL 57 M + A+ SR + L E D +E +++ +D G N AM L+ R Sbjct: 1 MNILAEIRSRFEPVLTEWTDDPSSVIE-------MLKASQDAKFGDYQANFAMPLAARIP 53 Query: 58 GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117 L P +A IV ++ + + + +AG GFIN+ L +L ++V G Sbjct: 54 DLKPRDLATQIVEKVDLSDFCEPLEVAGPGFINIKLKQEWLNTQTQNLVADE-RLGVVPA 112 Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 KV ++F + N PMHVGH R V+GD ++ F G++V + +I D G Q + Sbjct: 113 ESPQKVVVDFSAPNVAKPMHVGHLRSTVIGDANYRVLKFLGHDVVGDNHIGDWGTQFGMI 172 >gi|32490878|ref|NP_871132.1| hypothetical protein WGLp129 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|31340440|sp|Q8D372|SYR_WIGBR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|25166084|dbj|BAC24275.1| argS [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 576 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 128/541 (23%), Positives = 214/541 (39%), Gaps = 88/541 (16%) Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 G+IN++L S++ L I S + G + + K T + I++ S N MHVGH R ++ Sbjct: 82 GYINIFLKKSWIEDNLLKIYHSN-KLGISKLKKKTII-IDYSSPNIGKEMHVGHMRSTII 139 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN--NDSDLPEGYYPGV 204 GD+++ ++ G++V R +I D G Q L L+ F Q ++ +DL E YY Sbjct: 140 GDSISLILELLGHKVIRANHIGDWGNQFGML-LAYFNEKQNLKFSEITCTDL-ENYYINA 197 Query: 205 YLKHVGKELADKYSSELLNFPEEK--------WLPIVKDYSVQAMMKIIRDDLKALNIQH 256 K+ K+L K S+ +K W I + S++ KI LN H Sbjct: 198 KKKY-DKDLEFKKKSQFFTLKLQKKEKDCINIWKKIT-NLSIENNQKIYDQLNIKLNKTH 255 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 + E ++ P I D+ P K+ K L Sbjct: 256 --IMGESLYNDFVPYIISDL----------------PKKNLAINKSGNIMVILNNFKNKQ 297 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375 G + L K +G+Y Y D+A K +Y+ +IY S S + L V V Sbjct: 298 GKSMGVILKKRNGTYLYSVIDIACIKYRYDFFKAQKIIYYTDSRQS---QHLLQVFDIVR 354 Query: 376 EKKAQINVLLCELVR----LYRDGMPIKMSKRAGDFITLRHV------------------ 413 + K N + E + L +D P K R+GD I L + Sbjct: 355 KAKYIPNFVKLEHHKFGMVLKKDKTPFKT--RSGDTIKLSDLLKKSKEKAKKLIIKKNPN 412 Query: 414 --VDE-------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 +DE +G S+++ L + F++ + + N Y+QYAY R S+ Sbjct: 413 TSIDEIESLSQAIGIGSIKYFELSKNRETDYIFNWDNILSFN-GNTAPYIQYAYTRVISL 471 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 ++ K + L + E E D S + L ++ +I + + P+ L Y Sbjct: 472 IKKNKLKNKNNVKFLLKK-----EEEIDLS-----ICLLQFEEIINDVSKLGTPHILCNY 521 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 LYDL+ F + EN + ++ + RL L + + GL ++G+ + Sbjct: 522 LYDLSKTFSVFY----ENCSI--IKTKEESVKNSRLFLSILTSRTLKVGLELLGIPMVEK 575 Query: 585 M 585 M Sbjct: 576 M 576 >gi|258508781|ref|YP_003171532.1| arginyl-tRNA synthetase [Lactobacillus rhamnosus GG] gi|257148708|emb|CAR87681.1| Arginyl-tRNA synthetase [Lactobacillus rhamnosus GG] gi|259650087|dbj|BAI42249.1| arginyl-tRNA synthetase [Lactobacillus rhamnosus GG] Length = 560 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 54/288 (18%) Query: 326 KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA----- 379 KSDG+ Y DLA + E F +YV+G++ + ++L+AV + + A Sbjct: 299 KSDGATLYMTRDLAAAIFRKEHYHFVQSLYVVGNEQREHFQQLKAVLLEMGYEWANDIHH 358 Query: 380 ----------------QINVLLCELVRLYRDGMPI---KMSKRAGDFITLRHVVDEVGSD 420 + N++L E ++ +D + + ++ ++ D V EVG Sbjct: 359 IPFGLITANGKKLSTRRGNIILLE--KVLKDAVGLAQQQIDEKHPDLPNAEKVAHEVGVG 416 Query: 421 SVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 +V F L KN L +FDF V+ + + P YVQY AR SI R+A +I P Sbjct: 417 AVIFHDL--KNERLDNFDFNLEEVVRFEGETGP--YVQYTNARAHSILRKA-NIAP---- 467 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 P+ + D + ++ L +YP ++ A EP +A Y LA F+ +++ Sbjct: 468 -------APEVALSDPAAWDVLRALGDYPSIVVRAAKEYEPSVIAKYALRLAKAFNKYYA 520 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + V + +L RL +V A ++ + L+++GV +P EM Sbjct: 521 NVK-------VLVEDSELP-ARLAMVSATTQVLENALHLLGVAAPEEM 560 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 5/149 (3%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 ++E P+ G + L++ L P IA +VA+I P + V G G++N Y Sbjct: 27 LVETPKSSDLGDFAF-PTFSLAKILHQAPKMIASDLVAKIDASP-FEQVKAVG-GYVNFY 83 Query: 93 LSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L S+ ++L +I SG +G +G+G V I+ S N PM +GH R V+G+ LA Sbjct: 84 LDKISFAHEVLKAIAQSGEHFGDAKLGEGN-VPIDMSSPNIAKPMSMGHLRSTVIGNALA 142 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALS 180 +++ GY + ++ D G Q L ++ Sbjct: 143 NILQKVGYSPIKINHLGDWGTQFGKLIVA 171 >gi|115384424|ref|XP_001208759.1| arginyl-tRNA synthetase [Aspergillus terreus NIH2624] gi|114196451|gb|EAU38151.1| arginyl-tRNA synthetase [Aspergillus terreus NIH2624] Length = 666 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 123/531 (23%), Positives = 202/531 (38%), Gaps = 110/531 (20%) Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 K+ IEF S N P H GH R ++G LA+L G++V + Y+ D G Q LA Sbjct: 156 KIIIEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNYLGDWGKQYGLLANG- 214 Query: 182 FWRYQQALYNNDSDL---PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 ++Y + N+ +L P + VY+K + N E+ PI + Sbjct: 215 -YKY----FGNEEELLKDPINHLFNVYVK-------------INNMVAEQDGPIKELKEQ 256 Query: 239 QAMMKIIRDDLKALNIQHD--IFISEDDFHR--------GDPSPI------RDIIDNLAR 282 K +D+ L Q D + +SED+ R GD + RD+ R Sbjct: 257 IKTKKEKNEDVSELQAQLDKLVDVSEDEKARRYFKSMEDGDQEALALWRRFRDLSIQKYR 316 Query: 283 QGY--------VYEGILPPPKS------KTTQKCDMDRKQ-----LLFRSTMVGDDVDRP 323 Q Y VY G KT +K + K + F Sbjct: 317 QTYARLNIDFDVYSGESQIKNESMTAAYKTMEKAGVSEKSDGAVIVDFTKHGAKKLGKAI 376 Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA---------- 372 +++ DG+ Y D+ + E FD MIYV+ ++ +L + Sbjct: 377 IVRKDGTPLYLTRDIGAILERDEAYHFDKMIYVVAMQQDLHLAQLFKITELMGYKDLASR 436 Query: 373 ----------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL---RHVVDEVGS 419 +S +K + L ++++ RD M M K + + D +G Sbjct: 437 CQHVNFGMVRGMSTRKGTVK-FLDDILQDVRDKMHEVMKKNTEKYEQVADPEKTADILGI 495 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAK-DIF----P 473 SV + K DF+ + + P Y+QYA+AR SI R++ D+ Sbjct: 496 TSVMVQDMTGKRINGYDFNLEAMTSFEGDTGP--YLQYAHARLCSIVRKSGLDVTQLGSA 553 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 +LD P V L+ LA++P V+ N T EP + YL+ + + Sbjct: 554 NLDILTEPHAV------------NLVRLLAQWPDVLMNTTRTLEPTTIITYLFRMTHMLS 601 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 + + V + ++ M R+ L + ++NSG+ I+G+ SP E Sbjct: 602 SSYD-------VLKVVGSEPEVKMARMALYESARLVLNSGMRILGL-SPVE 644 >gi|296198734|ref|XP_002746843.1| PREDICTED: probable arginyl-tRNA synthetase, mitochondrial-like [Callithrix jacchus] Length = 578 Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 132/584 (22%), Positives = 238/584 (40%), Gaps = 126/584 (21%) Query: 54 SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEY 112 SRP D A+ + +++ D V + G+ +N ++ L K +L ++ G +Y Sbjct: 57 SRP---DIQVHAKRLAEKLRCDTVVSEI-STGERTVNFKINRELLTKTVLQQVIEDGSKY 112 Query: 113 G------RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166 G +L K K+ +EF S N HVGH R ++G+ +A+L G++V R Y Sbjct: 113 GLKSELFSDLPQK--KIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVIRINY 170 Query: 167 INDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-----KYSSE 220 + D G Q L + Y++ L +N P + VY++ V KE AD K + E Sbjct: 171 LGDWGMQFGLLGTGFQLFGYEEKLQSN----PLQHLFEVYVQ-VNKEAADDKSVAKSAQE 225 Query: 221 LLNFPEEK-------WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273 EE W +D S++ ++I K L I D + S + F+R Sbjct: 226 FFQRLEEGDVRALSLWQKF-RDLSIEEYIRI----YKRLGIYFDEY-SGESFYR---EKS 276 Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYT 332 ++++ L +G + + I K T D+ GD +++SDG+ Sbjct: 277 QEVLKLLESKGLLLKTI------KGTAVIDLSGN---------GDPSSICTVMRSDGTSL 321 Query: 333 YFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 Y DLA + ++ FD MIYV + +++ + + A+ C+ V Sbjct: 322 YATRDLAAAIDRMDKYNFDTMIYVTDKGQKKHFQQVFQMLKLMGYDWAE----RCQHVPF 377 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD--------------- 436 G+ M R GD L V++E+ ++ M + EL + Sbjct: 378 ---GVVQGMKTRRGDVTFLEDVLNEIQLRMLQNMASIKTTKELKNPQETAERVGLAALII 434 Query: 437 ------------FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 F++ +V QS+ + ++QY +AR S+ ++ F Sbjct: 435 QDFKGLLLSDYKFNWDRVF-QSRGDTGVFLQYTHARLHSL----EETFG----------- 478 Query: 485 IPQESEFDTSELQ------LIVHLAEYPRVIENATIAQEPYKLAFYLYD---LASVFHGH 535 ++F+T+ LQ ++ HL + V+ ++ +P + YL LA+V H Sbjct: 479 CGYLNDFNTACLQEPQSVSILQHLLRFDEVLYRSSQDLQPRHIVSYLLTLSHLAAVAHKT 538 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 P ++ RL+L AV S++ +G+ ++G+ Sbjct: 539 LQIKDSPP----------EVAGARLRLFKAVRSVLANGMKLLGI 572 >gi|294630717|ref|ZP_06709277.1| arginyl-tRNA synthetase [Streptomyces sp. e14] gi|292834050|gb|EFF92399.1| arginyl-tRNA synthetase [Streptomyces sp. e14] Length = 590 Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 9/138 (6%) Query: 45 LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104 N + L++ +P +A +VA++ + + ++G GF+N+ +S R I+ + Sbjct: 41 FQANGILALAKKAKANPRELATQVVAQVTAGDLIKDIEVSGPGFLNITVSD---RAIVEN 97 Query: 105 IVVSGIE-YGRNLIGK----GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 + + GR + + GT V I++ N MHVGH R AV+GD L L+ F+G Sbjct: 98 LAARATDPAGRLGVPQADHPGTTV-IDYAQPNVAKEMHVGHLRSAVIGDALVQLLEFTGE 156 Query: 160 EVTREYYINDAGAQINTL 177 V R ++I D G Q L Sbjct: 157 SVVRRHHIGDWGTQFGML 174 Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 71/296 (23%), Positives = 120/296 (40%), Gaps = 51/296 (17%) Query: 323 PLL--KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 PL+ KSDG Y Y A DL+ + + + ++YV+ + S + K + A Sbjct: 313 PLIVQKSDGGYGYAATDLSAIRDRVFNLKASTLLYVVDARQSLHFKMVFETARRAGWLGD 372 Query: 380 QINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 + L L +DG P K RAG+ + L+ ++D Sbjct: 373 DVTAHQLAFGTVLGKDGKPFKT--RAGETVKLQDLLDSAVERATAVVREKAEKVGLTEEE 430 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 VG +V++ L FD ++ + + V Y+QYAYAR +SI R+A Sbjct: 431 IVENGRYVGIGAVKYADLSTSAVRDYKFDLDQMVSLNGDTSV-YLQYAYARIQSILRKAG 489 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 + P E E +E +L + L + + + EP+KLA YLY LA Sbjct: 490 EARP----------AAHPELELAPAERELGLQLDRFGETVLEVAASYEPHKLAAYLYQLA 539 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 S+ + + N ++ RL LV A ++ G+ ++G+ +P + Sbjct: 540 SLLTTFYDQCQ-----VLSPDNAPEVVENRLFLVDLTARTLHQGMTLLGIRTPERL 590 >gi|207366683|emb|CAR64264.1| arginyl-tRNA synthetase [Glycine max] Length = 597 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 2/126 (1%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P + + I+ + ++S +AG GF+N+ LS ++ + L +++ GI+ + Sbjct: 75 PQAVGQAILNHLPQSEMIESCSVAGPGFVNIVLSKKWIAQRLERLLIDGIDKWAPRLPVK 134 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE-VTREYYINDAGAQINTLAL 179 T V ++F S N MHVGH R ++GDTLA + FS E + R ++ D G Q L Sbjct: 135 T-VLVDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSRVETLIRRNHLGDWGTQFGMLIA 193 Query: 180 SVFWRY 185 +F Y Sbjct: 194 HLFDTY 199 Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 15/134 (11%) Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 K N Y+QYA+AR SI R++ ++ + N++ + E L +HL ++P Sbjct: 474 KGNTAVYLQYAHARICSIMRKSGKDMEEIKKN---GNIVSNHED----ERALGLHLIQFP 526 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 V E + P L YLY+L +F + Q RL L A Sbjct: 527 EVFEESLTNLLPNVLCEYLYNLTEIFTKKFYTN--------CQVVGSPEETSRLLLCEAT 578 Query: 567 ASIINSGLNIIGVE 580 +++ ++G+E Sbjct: 579 VTVMRQCFYLLGIE 592 >gi|196046133|ref|ZP_03113361.1| arginyl-tRNA synthetase [Bacillus cereus 03BB108] gi|196023188|gb|EDX61867.1| arginyl-tRNA synthetase [Bacillus cereus 03BB108] Length = 562 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 80/300 (26%), Positives = 125/300 (41%), Gaps = 77/300 (25%) Query: 326 KSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 KSDG+ Y DL A + GFD +YV+G + S + Q + Sbjct: 300 KSDGATIYATRDLTAALYRQNTFGFDKALYVVGPEQSLHFN--------------QFFTV 345 Query: 385 LCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE----------------- 416 L +L + DGM P KMS R G I L V++E Sbjct: 346 LKKLGYTWVDGMEHVPFGFILKDGKKMSTRKGRVILLEEVLEEAIELAKQNIEEKNPNLE 405 Query: 417 --------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIF 465 VG +V F L KN + + +F +K + + P YVQY +AR SI Sbjct: 406 QKEEVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSIL 461 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 R+ F F L D ++ L ++ +V+E A EP ++ Y+ Sbjct: 462 RKESVEFETCTFALK-----------DDHSWSVVKLLNKFSQVVEAAFNKNEPSIISKYV 510 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 D+A F+ ++ + +R ++ + K + RL LV+AV ++ GL ++GVE+P EM Sbjct: 511 LDVAQSFNKYYGN------VRILEESEEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 562 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D+ + L I +K+ILD +IE P+ G + L++ P IA Sbjct: 2 DYKMQFAESLSNIFTNELTQKQILD--LIESPKQDEFGD-AAFPCFTLAKQYKKAPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V G ++N++ + + +L +I+ EYG+N G V Sbjct: 59 KEVAEKLS-DPFFTKVEAVGP-YVNVFFNRDTVSDAVLKTILAEKEEYGKNYFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|148224766|ref|NP_001085437.1| probable arginyl-tRNA synthetase, mitochondrial precursor [Xenopus laevis] gi|82184665|sp|Q6GQJ7|SYRM_XENLA RecName: Full=Probable arginyl-tRNA synthetase, mitochondrial; AltName: Full=Arginine--tRNA ligase; Short=ArgRS; AltName: Full=Arginyl-tRNA synthetase-like; Flags: Precursor gi|49117831|gb|AAH72745.1| MGC79100 protein [Xenopus laevis] Length = 580 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 127/563 (22%), Positives = 219/563 (38%), Gaps = 92/563 (16%) Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRN--LIGKGT 121 AE + ++ D + + +G + ++ L R +L I G YG N L + + Sbjct: 68 AEQLAGKLVCDSVISDIGTT-RGSVTFKINRDLLTRNVLQQISKDGSLYGLNTELFSELS 126 Query: 122 --KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA- 178 K +E+ S N HVGH R ++G+ +A+L G EV R Y+ D G Q L Sbjct: 127 RRKTIVEYSSPNIAKKFHVGHLRSTIIGNFIANLKQAVGNEVVRINYLGDWGLQFGLLGA 186 Query: 179 -LSVFWRYQQALYNNDSDLPEGYYP--GVYLKHVGKELADKYSSELLNFPEEKWLPI--- 232 S F ++ L N L E Y K G +L+ + L + L + Sbjct: 187 GFSSFGSKEKLLANPLQHLFEVYVKVNTAAEKDNGIKLSAQEFLRRLEGGDPHALSLWMH 246 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 +D S+Q KI K L D + S + F++ ++++ L +G + Sbjct: 247 FRDISIQEYAKIY----KRLGAHFDDY-SGESFYK---EKSQEVLKQLESKGLLL----- 293 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDN 351 K+ D+ + L + V ++SDG+ Y D+A + ER FD Sbjct: 294 --KTDKGTVIDLSEEGNLSSYSTV--------MRSDGTSLYITRDMAAAVDRMERYNFDE 343 Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 MIYV + ++L + + + +A C+ V G+ M R G+ + L Sbjct: 344 MIYVTDKSQKNHFQQLFKILKIMGKDQAD----RCQHVPF---GLVQGMKTRRGEVVFLE 396 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLD---------------------------FDFCKVKE 444 V+DE S ++ M + +L D FD+ + + Sbjct: 397 DVLDEARSRMLQNMAASETSKQLDDPSDTAEKIGIAALIVQDFKGQLVSDYHFDWDQALQ 456 Query: 445 QSKENPVFYVQYAYARCRSI--FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 + + VF +QY +AR S+ R +D DF++ S + + + HL Sbjct: 457 STGDTGVF-LQYTHARLHSLQALRCPRDT---EDFEI--------ASLREPCVIATLQHL 504 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 Y VI +P L YL L GH ++ R V+ ++ + RL Sbjct: 505 LRYDEVIYKCLEDLQPRYLVTYLLSL-----GHLANVAH--RTLQVKGSSSEAAHARLLF 557 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 V ++ +G+ ++G+ N M Sbjct: 558 FKNVQMVLGNGMKLLGITPVNNM 580 >gi|167957304|ref|ZP_02544378.1| arginyl-tRNA synthetase [candidate division TM7 single-cell isolate TM7c] Length = 237 Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 67/146 (45%), Gaps = 3/146 (2%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP--DVDSVFIAGK-GF 88 + + P + A LS+ L P I E I + D D A + GF Sbjct: 30 VTVTVPTQLDKADFVCDVAFRLSKILHTAPYVIGESIAKEVNSTQLQDGDYTLEAARPGF 89 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 IN++L+ L KIL I + YGRN I G + IE S NP MH+GH R ++G Sbjct: 90 INVHLTDVSLSKILIHINDTNQNYGRNDILAGQRWVIEHTSPNPNKAMHIGHLRNNLIGM 149 Query: 149 TLASLMAFSGYEVTREYYINDAGAQI 174 +A++ A+ G V R+ N+ G I Sbjct: 150 AVANIAAYCGASVVRDCIDNNRGIAI 175 >gi|67540396|ref|XP_663972.1| hypothetical protein AN6368.2 [Aspergillus nidulans FGSC A4] gi|40739562|gb|EAA58752.1| hypothetical protein AN6368.2 [Aspergillus nidulans FGSC A4] gi|259479413|tpe|CBF69611.1| TPA: arginyl-tRNA synthetase (AFU_orthologue; AFUA_2G14030) [Aspergillus nidulans FGSC A4] Length = 650 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 118/535 (22%), Positives = 208/535 (38%), Gaps = 115/535 (21%) Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA--L 179 K+ +EF S N P H GH R ++G LA+L G++V + Y+ D G Q LA Sbjct: 160 KIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNYLGDWGKQYGLLANGY 219 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 F Q+ L + + L E VY+K + N E+ PI + Sbjct: 220 KKFGDEQKLLQDPINHLFE-----VYVK-------------INNIVSEQEGPIKELKEQI 261 Query: 240 AMMKIIRDDLKAL--NIQHDIFISEDDFHR--------GDPSPI------RDIIDNLARQ 283 K +D+ L + + +SED+ R GDP + RD+ R+ Sbjct: 262 KAKKEKNEDVSKLEQELAKLVDVSEDENARRYFKSMEDGDPDALSLWRRFRDLSIKKYRE 321 Query: 284 GY--------VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDD------VDRP------ 323 Y VY G +S+ Q+ M + + +ST V ++ VD P Sbjct: 322 TYARLNIDYDVYSG-----ESQIKQES-MSKANEILQSTGVSENSDGATIVDFPKHGAKK 375 Query: 324 -----LLKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA----- 372 +++ DG+ Y D+ A F+ FD MIYV+ + ++ +L + Sbjct: 376 LGKAVIVRKDGTPLYLTRDIGAIFERDEAYHFDKMIYVVAAQQDLHLAQLFKIVELMGFK 435 Query: 373 ---------------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV--- 414 +S +K + L +++R D M M K + + + V Sbjct: 436 DLASRCQHINFGMVRGMSTRKGTVK-FLDDILRDVADKMHETMKKNEEKYAQIENPVETA 494 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAK---D 470 D +G SV + + DF+ + + P Y+QYA++R SI R+A+ + Sbjct: 495 DILGITSVMVQDMSGRRINGYDFNLDAMTSFEGDTGP--YLQYAHSRLCSILRKAEANVE 552 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 P + DL ++ + L+ L+ + ++ EP + YL+ L Sbjct: 553 ELPSANLDLLT----------ESHAVNLVRLLSSWHDILMMTNKTLEPTTILTYLFRLTH 602 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + V + +L RL L A ++++G+ I+G+ + M Sbjct: 603 MISSSYD-------VLQVIGSEPELKKARLALYEAARQVLHNGMRILGLSPVSRM 650 >gi|229133023|ref|ZP_04261864.1| Arginyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196] gi|228650441|gb|EEL06435.1| Arginyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196] Length = 562 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 82/302 (27%), Positives = 129/302 (42%), Gaps = 81/302 (26%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 KSDG+ Y DL Y + YE FD +YV+G + S + Q Sbjct: 300 KSDGATIYATRDLTAALYRQNTYE--FDKALYVVGPEQSLHFN--------------QFF 343 Query: 383 VLLCELVRLYRDGM---PI--------KMSKRAGDFITLRHVVDE--------------- 416 +L +L + DGM P KMS R G I L V++E Sbjct: 344 TVLKKLGYDWVDGMEHVPFGFILKDGKKMSTRKGRIILLEEVLEEAVALAEQNIEEKNPN 403 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRS 463 VG +V F L KN + + +F +K + + P YVQY +AR S Sbjct: 404 LKQKEDVAKQVGVGAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACS 459 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I R+ F F L + ++ S ++L L ++P+VIE A EP ++ Sbjct: 460 ILRKESVEFETCTFAL--------KDDYSWSVVKL---LNKFPQVIEAAFNKNEPSIISK 508 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y+ D+A F+ ++ + +R ++ + K + RL L +AV ++ GL ++GV +P Sbjct: 509 YVLDVAQAFNKYYGN------VRILEESEEKES--RLALAYAVTVVLKEGLRLLGVGAPE 560 Query: 584 EM 585 EM Sbjct: 561 EM 562 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 ++ ++ L I + +ILD +IE P+ G + L + P IA Sbjct: 2 NYKTQFAKSLSNIFTNELTQNQILD--LIETPKQNEFGD-AAFPCFSLVKQYKKSPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++K DP V G ++N++ + + K+L I+V EYG+N G V Sbjct: 59 KELAEKLK-DPFFTKVEAVGP-YVNVFFNRETVSDKVLKIILVEKEEYGQNHFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|167461684|ref|ZP_02326773.1| arginine-tRNA ligase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 367 Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 78/297 (26%), Positives = 129/297 (43%), Gaps = 56/297 (18%) Query: 324 LLKSDGSYTYFAADLAYFKCKYE--RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381 + KSDG+ Y DLA +++ +G D ++YV+G + + K++ AV K + Sbjct: 92 ITKSDGTTIYPTRDLATAIYRHDVMKG-DKLLYVVGGEQKLHFKQVFAVLG----KLGKT 146 Query: 382 NVLLCELVRL-YRDGMPIKMSKRAGDFITLR-------------------------HVVD 415 V CE V KMS R G ++L HV + Sbjct: 147 WVESCEHVPFGLMKFAGKKMSTRRGRVVSLEEVLQEAVNRAREIIEEKNPLLPDKEHVAE 206 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 VG ++ F L KN+ + + DF + + P YVQY +AR +S+ +A Sbjct: 207 AVGIGAIVFGDL--KNNRVNEIDFSLDEALNFDGETGP--YVQYTFARTQSVLAKA---- 258 Query: 473 PDLDFDLFPRNVIPQESEFDT----SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 + +F L I S+ ++ S QLI L+ YP+ IE A EP +A Y + Sbjct: 259 -EWNFSLADCKNILSHSDLNSINHSSVWQLIKQLSLYPQAIERAVKRNEPSVVARYALET 317 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A F+ ++ R + A + K +L + A A II L+++G+++P +M Sbjct: 318 AKAFNRFYNLNR-------ILAEDEKEQKAKLIVTTAAAEIIRRSLHLLGLKTPKQM 367 >gi|308068745|ref|YP_003870350.1| Arginyl-tRNA synthetase (arginine--tRNA ligase) [Paenibacillus polymyxa E681] gi|305858024|gb|ADM69812.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) [Paenibacillus polymyxa E681] Length = 576 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 128/559 (22%), Positives = 218/559 (38%), Gaps = 111/559 (19%) Query: 84 AGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 A ++N+ L S ++ +L+ + S ++ R IG G +V I+ S N P +GH R Sbjct: 72 ASGAYVNITLDRSVHIPLMLAEL--SKADFLRPNIGHGQRVVIDMSSPNIAKPFGIGHLR 129 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQIN-TLALSVFWRYQQALYNNDSDLPEGYY 201 V+G L ++ +GY ++ D G Q +A W ++ L ++ P G Sbjct: 130 STVIGAALYRILDETGYIPISVNHLGDWGTQFGKQIAAYKRWGNEEQLQHD----PIGES 185 Query: 202 PGVYLK-HVGKELADKYSSELLNF----------PEEKWLPIVKDYSVQAMMKIIRDDLK 250 +Y++ H E E + ++ W ++ V+ + + Sbjct: 186 LKLYVRFHQEAEHDPTLEDEGREWFRRLEHGDAEAQQLW-----EFFVEVSLGEFDRMYQ 240 Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310 LNI D + E ++ ++ ++ L +G + E LL Sbjct: 241 RLNITFDHVLGESFYN----DKMQTVVAQLRAKGLLEE----------------SDGALL 280 Query: 311 FRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKR 366 R +D + P +LK DG+ Y DLA ++E D ++YV+G + + ++ Sbjct: 281 VRL----EDEELPPCLILKKDGTTIYPTRDLATAIYRHEVMKADRLLYVVGGEQKLHFQQ 336 Query: 367 LEAVAAAVSEKKAQINVLLCELV--RLYRDGMPIKMSKRAGDFITLRHVVDE-------- 416 + AV E A+ CE V L R KMS R G + L V+DE Sbjct: 337 VFAVLKHAGEAWAE----QCEHVPFGLMRFAGK-KMSTRRGKVVKLEEVLDEAIARAQAI 391 Query: 417 -----------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF-YVQYAY 458 VG ++ F L KN+ L + DF + + E YVQY + Sbjct: 392 ITQKNPDLQEQQAVAEDVGIGAIIFGDL--KNNRLNEVDFSLEEALTFEGETGPYVQYTH 449 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPR-NVIPQESE-----------FDTSELQLIVHLAEYP 506 AR RS+ +A D+D + P N + Q+S + L+ L Y Sbjct: 450 ARIRSLLEKAY-ARADVDVNTNPSDNDLVQDSHSRDLNDVLDGMLGNAGWALLKQLGRYH 508 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 + A EP +A + D A F+ ++ + R V R+QL Sbjct: 509 GQLIRAARQLEPSVIARFALDTAQAFNRFYA------KERIVDGGQ-----WRIQLAEQT 557 Query: 567 ASIINSGLNIIGVESPNEM 585 A I+ L ++G+++PN M Sbjct: 558 ADILACALQLLGLKAPNRM 576 >gi|269838307|ref|YP_003320535.1| arginyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745] gi|269787570|gb|ACZ39713.1| arginyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745] Length = 724 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 88/366 (24%), Positives = 157/366 (42%), Gaps = 72/366 (19%) Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY--VYEGILPPPKSKTTQKCDMDRKQL 309 L++ D++ E + P R I+ L +G + +G+ P K +K ++++ Sbjct: 399 LDVHFDVWFYESEVE----EPGRQIVQELLERGIAEISDGL---PVVKIDEKLGLEKE-- 449 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLE 368 +R+ P+L+SDG+ Y DLA K K+E+ D I+V+ S Y +++ Sbjct: 450 TYRTL--------PILRSDGTTLYSTKDLALTKMKFEQYHVDRSIWVVDVRQSLYFQQIF 501 Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI-----------TLRHVVDE- 416 + ++A+ L + G MS R+G+ + R ++DE Sbjct: 502 KIMELWGFEQAEKCYHLSYETVMLPTGA---MSSRSGNVVLYEDIAARVLQRAREIIDEK 558 Query: 417 ---------------VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYAR 460 VG S+++ ML R N+ +L FD + + P Y+QYA+AR Sbjct: 559 NPSLPDEVKDRIANDVGLGSMKYGMLMRDNNRVLVFDIEEALSFEGHAAP--YIQYAHAR 616 Query: 461 CRSIFRQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 I + I + L F ++ T E+ LI +A +P +E A +P Sbjct: 617 ACRILEKVDQIPTEGLTF-----------TDLTTEEINLIQQVAIFPSEVERAAAEYKPL 665 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 +A Y+Y+LA F+ + R P L QA + + + A ++ N GL ++G+ Sbjct: 666 VIANYVYELAKRFNDFY---RACPVL---QAEEPQRSARLALVAAARQTLAN-GLGLLGI 718 Query: 580 ESPNEM 585 +P M Sbjct: 719 AAPETM 724 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 66/126 (52%), Gaps = 7/126 (5%) Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINL-YLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 IAE + R++ SV A G+IN+ + + + +++ +++ +G +YGR K Sbjct: 86 AIAEQVAERLRAADGFASV-EAVNGYINIGFDTNRFSNEVVHAVLTTGEDYGRGE-PKTD 143 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 +V +E+ N HVGH R +G+ L+ +M F+G++V + YI D G + + Sbjct: 144 RVMVEYSQPNTHKAFHVGHLRNVCLGNALSRIMKFAGFDVLQANYIGDIGLHV----IKT 199 Query: 182 FWRYQQ 187 W YQ+ Sbjct: 200 LWCYQR 205 >gi|330861410|emb|CBX71639.1| hypothetical protein YEW_GQ28430 [Yersinia enterocolitica W22703] Length = 199 Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 2/135 (1%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G N M +++ LG+ P +AE ++ + +D V IAG GFIN++L ++ + Sbjct: 37 GDYQANGVMAVAKKLGMQPRQLAEKVIELLDLDGIARKVEIAGPGFINIFLDRQWVASKV 96 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 + + G + T V +++ + N MHVGH R ++GD + F G+ V Sbjct: 97 EE-ALKAPKLGVQPVEPQTIV-VDYSAPNVAKQMHVGHLRSTIIGDAAVRTLEFLGHNVI 154 Query: 163 REYYINDAGAQINTL 177 R ++ D G Q L Sbjct: 155 RANHVGDWGTQFGML 169 >gi|325283885|ref|YP_004256426.1| Arginyl-tRNA synthetase [Deinococcus proteolyticus MRP] gi|324315694|gb|ADY26809.1| Arginyl-tRNA synthetase [Deinococcus proteolyticus MRP] Length = 609 Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 12/156 (7%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 LD + E P G T AA L++ LG +P +A+ + I++ + V AG F Sbjct: 22 LDPAIQETPA-GKKGDYGTPAAFQLAKMLGRNPAEVAQDLARSIQLPAGIARVEAAGP-F 79 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 +N ++ ++ V +E + + KV IE S NP +HVGH R V+GD Sbjct: 80 LNFFVD-------VADFVRGVVENPTPMPQQEGKVVIEHTSVNPNKELHVGHLRNVVLGD 132 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +LA +M +G+ V + YI+D G Q A S+F R Sbjct: 133 SLARIMRAAGHTVEVQNYIDDTGRQA---AESLFAR 165 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 12/177 (6%) Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 + +G ++RF ML + + +DF + + + YVQYA R +I R+A+ Sbjct: 442 EIARRIGIGAIRFAMLKAEPTRQIDFRWDSALALTGDT-APYVQYAAVRAGNILRKAEAE 500 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 +D +P +L L +A P V+E AT P+ +A Y DLA+ Sbjct: 501 GYAVDGSGADWAALPD------IDLALAKAVARLPEVVEQATRIHSPHVVAQYALDLATT 554 Query: 532 FHGHWSHGRE---NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ W + ++ P +Q+ L RL LV V L++IG+E P M Sbjct: 555 FN-SWYNAKDKVGKPATNVLQSPE-GLREARLALVGRVRRAFEETLDLIGIEVPAAM 609 >gi|281208239|gb|EFA82417.1| arginyl-tRNA synthetase [Polysphondylium pallidum PN500] Length = 711 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 132/632 (20%), Positives = 242/632 (38%), Gaps = 151/632 (23%) Query: 53 LSRPLGLDPLTIAELIVARIK--IDPDVDSVFI-----AGKGFINLYLSPSYLRKILSSI 105 LSR LG D I E + I+ ID + D + + K F+N+ LS YL + L+ Sbjct: 132 LSRQLGGDNKKIVEQMRQLIQKDIDENRDGMSLIKDVSVEKNFVNVSLSQDYLEQSLAVW 191 Query: 106 V---------VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 + + L + +V ++F S N + +HVGH R +G+++ ++ + Sbjct: 192 LKGEAPLYELTKQHKQSLQLPLEPKEVLVDFASPNMSKELHVGHLRSLALGESVCRILEY 251 Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK 216 + V R ++ AG + + + + AL N +L+H+ DK Sbjct: 252 RNHRVER---VSHAGDFGTPMGMVISY----ALENK----------AEFLRHIW----DK 290 Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-----ISEDDFHRGDPS 271 S L + P ++P K S I D K L F ++ + +G P+ Sbjct: 291 QSG-LSSMP---FIPTPKQLST------IYSDAKKLTKTDSEFSKRAHLAAAELQKGPPT 340 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL------FRS-TMVGD------ 318 +N +Y L ++ + +++L RS MV + Sbjct: 341 TTSGDNNNGGSDPDIYRAWLDLMDINVKERGESWYREMLEPAIEELRSLNMVSESEGAVC 400 Query: 319 ----DVDRPLL--KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD-HSGYVKRLEAVA 371 D P++ KSDG+Y Y D+A K + + ++ D + +++ +A Sbjct: 401 VFLEDQKTPVIIKKSDGAYLYATTDIAAIKNRLVTNKKQWVIIITDDSQKQHFQQVFTIA 460 Query: 372 AAVS----EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV---------- 417 + + +++ L +VR +G+ K+S R GD + L ++ E Sbjct: 461 QLAGWYRPDTEHRVDHLSFGVVR-GENGL--KLSSREGDPLALEELLQEAIQRAKDATIT 517 Query: 418 --------------------GSDSV--RFMM----LW------------------RKNSE 433 G+D V RF + W R NS Sbjct: 518 SRSLTRAEKLDQTHTAQQLDGADRVEDRFELDQYNTWEHYRKIGLGAIKYFDLSQRSNSY 577 Query: 434 LLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT 493 FD K N Y+ Y Y R ++ ++A+ +D + F + EF Sbjct: 578 TFSFDRML---SFKGNTSIYILYCYTRISTLMKRAQFDINAIDLNTF------KFKEFSE 628 Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553 E +L++ ++++P VI P L YL+D++ FH + R VQ Sbjct: 629 KERKLVLMISKFPDVIRATESTLRPAVLCDYLWDISDCFHHFYESERVIGSDTMVQ---- 684 Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +L + H + +IIN+G +++G+E+ + + Sbjct: 685 -----KLLIAHVIQNIINTGFHLLGLETVDRL 711 >gi|297291297|ref|XP_001092575.2| PREDICTED: probable arginyl-tRNA synthetase, mitochondrial [Macaca mulatta] Length = 593 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 127/580 (21%), Positives = 240/580 (41%), Gaps = 118/580 (20%) Query: 54 SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEY 112 SRP D A+ + +++ D V + G+ +N ++ L K +L ++ G +Y Sbjct: 72 SRP---DIQVQAKRLAEKLRCDTVVSEI-STGQRTVNFKINRELLTKTVLQQVIEDGSKY 127 Query: 113 G-RNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168 G ++ + G K+ +EF S N HVGH R ++G+ +A+L G++V R Y+ Sbjct: 128 GLKSELFSGLPRKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVIRINYLG 187 Query: 169 DAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS-------- 219 D G Q L + Y++ L +N P + VY++ V KE AD S Sbjct: 188 DWGMQFGLLGTGFQLFGYEEKLQSN----PLQHLFEVYVQ-VNKEAADDKSVAKSAQEFF 242 Query: 220 ELLNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276 + L + + L + +D S++ +++ K L + D + S + F+R +++ Sbjct: 243 QRLELGDVQALSLWQKFRDLSIEEYVRV----YKRLGVYFDEY-SGESFYR---EKSQEV 294 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFA 335 + L +G + + I K T D+ GD +++SDG+ Y Sbjct: 295 LKLLESKGLLLKTI------KGTAVVDLSGN---------GDSSSICTVMRSDGTSLYAT 339 Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394 DLA + ++ FD MIYV + +++ + + A+ C+ V Sbjct: 340 RDLAAAIDRMDKYNFDTMIYVTDKGQKKHFQQVFQMLKIMGYDWAE----RCQHVPF--- 392 Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL-----------------LDF 437 G+ M R GD L V++E+ ++ M + EL DF Sbjct: 393 GVVQGMKTRRGDVTFLEDVLNEIQLRMLQNMASIKTTKELKNPQETAERVGLAALIIQDF 452 Query: 438 DFCKVKE---------QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488 + + QS+ + ++QY +AR S+ ++ F Sbjct: 453 KGLLLSDYKFSWDRVFQSRGDTGVFLQYTHARLHSL----EETFG-----------CGYL 497 Query: 489 SEFDTSELQ------LIVHLAEYPRVIENATIAQEPYKLAFYLYD---LASVFHGHWSHG 539 ++F+T+ LQ ++ HL + V+ ++ +P + YL LA+V H Sbjct: 498 NDFNTACLQEPQSVSILQHLLRFDEVLYKSSQDLQPRHIVSYLLTLSHLAAVAH------ 551 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 R ++ + ++ RL L AV S++ +G+ ++G+ Sbjct: 552 ----RTLQIKDSPPEVAGARLHLFKAVRSVLANGMKLLGI 587 >gi|290958345|ref|YP_003489527.1| arginyl-tRNA synthetase [Streptomyces scabiei 87.22] gi|260647871|emb|CBG70976.1| putative arginyl-tRNA synthetase [Streptomyces scabiei 87.22] Length = 589 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 7/134 (5%) Query: 48 NAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVV 107 N + L++ +P +A +VAR++ + + ++G GF+N+ L+ + + L++ Sbjct: 43 NGILALAKKAKANPRELATQVVARVESGELIGEIEVSGPGFLNITLTDRAITQNLAARYA 102 Query: 108 SGIEYGRNLIGK----GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR 163 + GR + GT V I++ N MHVGH R AV+GD + ++ F+G V R Sbjct: 103 D--DTGRLGVPTAERPGTTV-IDYAQPNVAKEMHVGHLRSAVIGDAVVQILEFTGENVVR 159 Query: 164 EYYINDAGAQINTL 177 ++I D G Q L Sbjct: 160 RHHIGDWGTQFGML 173 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 74/298 (24%), Positives = 130/298 (43%), Gaps = 55/298 (18%) Query: 323 PLL--KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVA---AAVSE 376 PL+ KSDG Y Y A DL+ + + + ++++YV+ + S + K + A +++ Sbjct: 312 PLIVKKSDGGYGYAATDLSAIRDRVFHLKANSLLYVVDARQSLHFKMVFETARRAGWLND 371 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416 + L V L +DG P K R G+ I L ++DE Sbjct: 372 DDVKAFQLAFGTV-LGKDGKPFKT--REGETIRLVDLLDEAIDRATAVVREKAEKVGLTE 428 Query: 417 ---------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467 VG +V++ L FD ++ + + V Y+QYAYAR +SI R+ Sbjct: 429 DEIVENGRYVGIGAVKYADLSTSAVRDYKFDLDQMVSLNGDTSV-YLQYAYARIQSILRK 487 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 A + P E E +E L +HL ++ + + EP+KLA YL+ Sbjct: 488 AGEAGP----------AAHPELELAPAERALGLHLDQFGEAVAEVAESYEPHKLAAYLFR 537 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA++ + + P L+ A + RL LV A ++ G+ ++G+ +P+++ Sbjct: 538 LATLLTSFYD---QCPVLK---AESPAQVENRLFLVDLTARTLHRGMALLGIRTPDKL 589 >gi|330834376|ref|YP_004409104.1| arginyl-tRNA synthetase [Metallosphaera cuprina Ar-4] gi|329566515|gb|AEB94620.1| arginyl-tRNA synthetase [Metallosphaera cuprina Ar-4] Length = 619 Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 28/67 (41%), Positives = 42/67 (62%) Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170 +YG + + K+ IE SANP P+H+GH R A++GDTL L G++V +Y+ND+ Sbjct: 95 DYGLEKVERPKKIIIEHTSANPIHPLHIGHLRNAIIGDTLVRLSKARGHDVISRFYVNDS 154 Query: 171 GAQINTL 177 G Q+ L Sbjct: 155 GRQVALL 161 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 82/382 (21%), Positives = 165/382 (43%), Gaps = 60/382 (15%) Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD-FHRGD-PSPIRDIIDNLARQGYVYEG 289 +V+ Y V +++ R+ L+ L I D F E D G+ S +R + + AR Y Sbjct: 270 VVRKY-VNYVLEGFRESLEKLGITFDYFDYESDILWSGEVKSVLRSALSSKARIEY---- 324 Query: 290 ILPPPKSKTTQKCDMDR--KQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCK 344 K T+ ++++ + + R + + ++ P L +SDG+ Y D+AY K Sbjct: 325 -------KGTEALELNKYVDEEIRRELRIPEGLEIPPLVLTRSDGTTLYTVRDIAYTIRK 377 Query: 345 Y-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403 + + +I V+ S +L A + + N++ + G MS R Sbjct: 378 FISTNAEQVINVIAEQQSVPQIQLRAALYLLGYPEMAKNLIHYSYSMVTLPGT--TMSGR 435 Query: 404 AGDFITLRHVVD-------------------EVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 G +I+L + D E+ + ++R+ ++ + + F+ KV Sbjct: 436 LGRYISLDEIYDKVMLTVLEKTKDRGGVNVAEIVNSAIRYAIISVSANRPITFNVSKVT- 494 Query: 445 QSKENPVFYVQYAYARCRSIF-RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503 ++N Y+QY Y R +I + +I ++D+ ++ + ++++ L Sbjct: 495 NFEQNSGPYLQYTYVRAYNILAKYPHEINLNVDY-----------TDVVMEKRKILMALL 543 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 ++P V + + + +P L YL LA F+ + + R +Q + + M RL LV Sbjct: 544 KFPEVFKVSADSLQPETLVSYLRSLADSFNSWYD------KERVIQEPDERKRMTRLNLV 597 Query: 564 HAVASIINSGLNIIGVESPNEM 585 V ++I +GL ++G+ S +M Sbjct: 598 KGVETVIRNGLQVLGISSLTKM 619 >gi|126662120|ref|ZP_01733119.1| arginyl-tRNA synthetase [Flavobacteria bacterium BAL38] gi|126625499|gb|EAZ96188.1| arginyl-tRNA synthetase [Flavobacteria bacterium BAL38] Length = 595 Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 77/303 (25%), Positives = 125/303 (41%), Gaps = 50/303 (16%) Query: 315 MVGDDVDRPL-LKSDGSYTYFAADL--AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371 + D +DR + L+SDG+ Y D+ A + K M+Y +G++ + K L + Sbjct: 311 LTADGLDRKIVLRSDGTAVYMTQDIGTAIQRVKDFPDVGGMVYTVGNEQDYHFKVLFLIL 370 Query: 372 AAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFI-----------TLRHVVDEVG- 418 + A + L +V L KM R G + T + + +E+G Sbjct: 371 KKLGFDWADSLYHLSYGMVELPSG----KMKSREGTVVDADDLMAEMTTTAQAISEELGK 426 Query: 419 ----SDSVRFMMLWRKNSELLDFDFCKV--KEQSKENPV----------FYVQYAYARCR 462 S+S + + L + KV K+Q NP ++QY YAR + Sbjct: 427 LEGYSESEKSKLYTTIGLGALKYYMLKVDPKKQMMFNPEESVDFAGNTGSFIQYTYARIQ 486 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 SI R+A DFD F V E E E +LI + +P VI+NA P +A Sbjct: 487 SILRKA-------DFD-FENVVTSSEVEMHEKEKELIKQVQLFPEVIQNAAENHSPALIA 538 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 Y YDL F+ + ++ + N + R+QL +V + I + ++G+E P Sbjct: 539 NYTYDLVKEFNSFYQ------QVSILGEENHDKKVFRVQLSKSVGNTIKNAFQLLGIEVP 592 Query: 583 NEM 585 M Sbjct: 593 ERM 595 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 8/160 (5%) Query: 22 IKVEKKILD--RIVIERPR-DCAHGHLSTNAAMI---LSRPLGLDPLTIAELIVARIKID 75 + ++K +L+ I IE+ + M+ L + L +P+ I I + + Sbjct: 9 VHIQKAVLELFNISIEKVEFQATRKEFEGDVTMVVFPLVKALKGNPVEIGNQIGNYLVAN 68 Query: 76 PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTG 134 + F GF+N+ +S +Y + +SI + +G +G K V +E+ S N Sbjct: 69 IHEVAKFNVVGGFLNIVISDAYYIEFFNSIK-NNETFGFLAPKEGEKAVMVEYSSPNTNK 127 Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 P+H+GH R ++G ++A ++ SG +V + IND G I Sbjct: 128 PLHLGHIRNNLLGYSVAEIIKASGKKVYKTQIINDRGIHI 167 >gi|289643118|ref|ZP_06475248.1| Arginine--tRNA ligase [Frankia symbiont of Datisca glomerata] gi|289507082|gb|EFD28051.1| Arginine--tRNA ligase [Frankia symbiont of Datisca glomerata] Length = 344 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 85/183 (46%), Gaps = 17/183 (9%) Query: 410 LRHVVDEVGSDSVRFMML-------WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462 L +V VG+D+ R+ + ++ +L+D D + Q+ NPVF VQYA+ R Sbjct: 172 LADLVSTVGTDAARYSLARLPPGSAGARDIDLIDLDV--ITRQANGNPVFRVQYAHTRIC 229 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 + R A + +D + +++ E D L+ L + PR + A PY++A Sbjct: 230 LLLRNAGQLGLGVDVEGADVSLLTHPREGD-----LLRALGDLPRAVAAAAELWAPYRVA 284 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 YL +LA + H HG R A LT RL L A ++ GL+++GV +P Sbjct: 285 RYLEELADTY--HRFHGVCEVLPRGNDAAG-ALTGARLLLADATRIVLAGGLHLLGVSAP 341 Query: 583 NEM 585 M Sbjct: 342 TRM 344 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 4/121 (3%) Query: 5 ADFSSRLKNYLKEI--DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 AD + L+ + ++ D ++ VE + + +ERPR HG +T A+ L+RP P Sbjct: 4 ADLAETLRAIVCDLVADDELDVEAPTM--VPVERPRIAGHGDYTTAIALRLARPARRPPR 61 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 IAE + AR+++D V V +A GF+N+ L+ +I IV +G Y R+ + T Sbjct: 62 EIAEAVAARLRLDQAVSGVDVAAGGFLNIRLASDARGEIARMIVRAGDGYVRDTAARDTA 121 Query: 123 V 123 Sbjct: 122 A 122 >gi|225154902|ref|ZP_03723400.1| Arginine--tRNA ligase [Opitutaceae bacterium TAV2] gi|224804432|gb|EEG22657.1| Arginine--tRNA ligase [Opitutaceae bacterium TAV2] Length = 606 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 4/145 (2%) Query: 36 RPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK--IDPDVDSVFIAGKGFINLYL 93 R D HG N + ++ +P +AE + A + + D D + IAG GFIN L Sbjct: 34 RTADPKHGDYQANGVLGYAKREKQNPRALAEKLTAALPPPLRADFD-ITIAGPGFINFTL 92 Query: 94 SPSYLRKILSSI-VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 PS + L++ + G G +++ S N MHVGH R AV+G+ + Sbjct: 93 RPSAAQAWLNAYGTRQKLGAGAAAACAGQTWVVDYSSPNTAKQMHVGHLRSAVIGEAICR 152 Query: 153 LMAFSGYEVTREYYINDAGAQINTL 177 L+AF+G V R+ ++ D G Q L Sbjct: 153 LLAFAGARVIRDNHLGDWGTQFGKL 177 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 12/179 (6%) Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R + VG SV++ L + S F + K+ N Y+ YA AR RSIFR+ Sbjct: 436 REIARAVGVGSVQYADLSQNRSSNYVFSWDKMLALDG-NTAPYLLYAVARIRSIFRKLGL 494 Query: 471 IFPDL---DFDLFPRNVIPQESEFDT-SELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 PD D + S+ +T +E+ L L + P + AT P+ L YLY Sbjct: 495 PPPDQESGDEGQRAEDYAAAASQIETPAEMSLARKLVKLPDTLALATGQLRPHFLCLYLY 554 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +LA F ++ + V ++ + RL L ++ +GL+++G+ + M Sbjct: 555 ELAGEFSAFYAAEK-------VAVDDPAVRARRLLLCARTLLVLETGLHLLGLRTLERM 606 >gi|149179591|ref|ZP_01858117.1| arginyl-tRNA synthetase [Planctomyces maris DSM 8797] gi|148841572|gb|EDL56009.1| arginyl-tRNA synthetase [Planctomyces maris DSM 8797] Length = 109 Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats. Identities = 32/71 (45%), Positives = 48/71 (67%), Gaps = 1/71 (1%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + +E PRD +HG L+TNAAM+L++ +P +AE IV + +PD+ IAG GFINL Sbjct: 37 VTVEPPRDPSHGDLATNAAMVLAKKAKTNPRALAEKIVEHLTREPDITEASIAGPGFINL 96 Query: 92 YLSP-SYLRKI 101 LS ++LR++ Sbjct: 97 CLSEQAWLREL 107 >gi|317127046|ref|YP_004093328.1| arginyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522] gi|315471994|gb|ADU28597.1| arginyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522] Length = 561 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 10/171 (5%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IE+P+ G L+ LS+ L P IA I +++ + SV + G ++N++ Sbjct: 28 LIEKPKYENLGDLAF-PCFQLSKLLRKSPAIIANEIAEKLQ-SSSISSVEVKG-AYVNVF 84 Query: 93 LSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + K I+ ++ G YG N + KV I+F S N P +GH R V+G+ LA Sbjct: 85 FDKVLVGKAIIDKVIARGTSYGSNDVNSRGKVVIDFSSPNIAKPFSMGHLRSTVIGNALA 144 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202 ++ +GYE + ++ D G Q L + L+ N+ ++ E P Sbjct: 145 AIAEKNGYESVKINHLGDWGTQFGKLITAY------KLWGNEEEVRENTIP 189 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 73/290 (25%), Positives = 125/290 (43%), Gaps = 58/290 (20%) Query: 326 KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 K+DG+ Y DLA K + E F +Y++G + + ++L V + E+ A +++ Sbjct: 300 KNDGTTLYATRDLAAAKFRKETYDFVKCLYIVGGEQQLHFQQLFQVLQIMDEEWAA-DMV 358 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------VGS 419 + +DG KMS R G + L V+ E VG Sbjct: 359 HIPFGLILKDGK--KMSTRKGKVVLLEEVLQEAINKTKQNIIDKNPLLDNIDDVAKQVGV 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF-YVQYAYARCRSIFRQAKD---IFPDL 475 +V F L KN + + +F + + E YVQY AR ++ +AK F L Sbjct: 417 GAVIFHDL--KNERIGNVEFNLDQMLTFEGETGPYVQYTIARGNTLLAKAKTKQHSFKGL 474 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 D DL ++I L ++P VIE A A EP +A Y+ LA F+ Sbjct: 475 DGDL---------------SWEVIKLLEQFPAVIERAFTAYEPSIVAKYVIKLAQAFNSF 519 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + ++ +Q + + + RL L +V ++ GL ++G+++P +M Sbjct: 520 YGN------VKILQEDKHQES--RLALTQSVTIVLTEGLRLLGMQAPEKM 561 >gi|315271275|gb|ACO45989.2| putative Arginine--tRNA ligase (Arginine translase) (Arginyl-tRNA synthetase) [Deinococcus deserti VCD115] Length = 609 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 12/161 (7%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKI 101 G T AA +++ G +P IA + +++ + V AG F+N +L + ++R + Sbjct: 35 GDYGTPAAFQMAKSAGGNPAQIAAQLAQTVQLPTGIKRVEAAGP-FLNFFLDTAMFVRDV 93 Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161 + + V + G KV IE S NP +HVGH R V+GD++A + +G+ V Sbjct: 94 VENPFV--------MPSLGGKVVIEHTSVNPNKELHVGHLRNVVLGDSMARIFRAAGHTV 145 Query: 162 TREYYINDAGAQINT--LALSVFWRYQQALYNNDSDLPEGY 200 + YI+D G Q A++ + R D L EGY Sbjct: 146 EVQNYIDDTGRQAAEALFAINHYHREWDGTQKYDHWLGEGY 186 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 12/176 (6%) Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 + +G ++RF ML + + +DF + + + + YVQYA R SI R+A++ Sbjct: 443 IARRIGIGAIRFAMLKAEPTRKIDFRWEQALALNGDT-APYVQYAAVRAASILRKAQEAG 501 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 +++ + +P +L L +A P V+ + P+ +A Y DLA+ F Sbjct: 502 HNINGSGADWDALPD------VDLALAKMVARLPEVVAQSVRVHSPHVVAQYALDLATAF 555 Query: 533 HGHWSHGRE---NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + W + ++ P +Q+ L RL LV + L++IG+E P M Sbjct: 556 NA-WFNAKDRQGKPATNVLQSEP-GLREARLALVGRLRRAFEETLDLIGIEVPAAM 609 >gi|255730453|ref|XP_002550151.1| arginyl-tRNA synthetase [Candida tropicalis MYA-3404] gi|240132108|gb|EER31666.1| arginyl-tRNA synthetase [Candida tropicalis MYA-3404] Length = 352 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 81/346 (23%), Positives = 140/346 (40%), Gaps = 54/346 (15%) Query: 277 IDNLARQGYVY-----EGILPPPKSKTTQK-------CDMDRKQLLFRSTMVGDDVDRPL 324 ID AR Y E +P K K K D+DR L T + + L Sbjct: 24 IDTYARLNIKYDVYSGESQVPQEKMKEATKMFEDKGLIDIDRGAKLIDLTKFNKKLGKAL 83 Query: 325 L-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS---------------GYVKRL 367 + KSDG+ Y D+ +YE FD MIYV+ + + K L Sbjct: 84 VEKSDGTSLYLTRDVGEAIKRYETYKFDKMIYVIAAQQDLHCAQFFEILKQMGFDWAKNL 143 Query: 368 EAV----AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR---HVVDEVGSD 420 E V +S +K + V L +++ ++ M M K + + + D +G Sbjct: 144 EHVNFGMVQGMSTRKGTV-VFLDNILQETKEKMHEVMQKNEEKYAQIEDPDKIADLIGIS 202 Query: 421 SVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 +V + K +F + ++ + P Y+QYA++R SI R++ +L+ Sbjct: 203 AVMIQDMQSKRIHNYEFKWDRMTSFEGDTGP--YLQYAHSRLCSIQRKSGISIEELEHAN 260 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 F V P + L+ LA+YP +I+ A + EP + YL++L + + Sbjct: 261 FDLLVEP-------CAVNLVRTLAQYPDIIKRAVNSLEPSTIVTYLFNLTHIVSQCYD-- 311 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +V + L + RL L A ++N+G+ ++G+ M Sbjct: 312 -----ILWVAGQEKDLAVARLALYEATRQVVNNGMKLLGLTPVERM 352 >gi|10435519|dbj|BAB14608.1| unnamed protein product [Homo sapiens] Length = 578 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 129/580 (22%), Positives = 236/580 (40%), Gaps = 118/580 (20%) Query: 54 SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEY 112 SRP D A+ + +++ D V + G+ +N ++ L K +L ++ G +Y Sbjct: 57 SRP---DIQVQAKRLAEKLRCDTVVSEI-STGQRTVNFKINRELLTKTVLQQVIEDGSKY 112 Query: 113 G-RNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168 G ++ + G K+ +EF S N HVGH R V+G+ +A+L G++V R Y+ Sbjct: 113 GLKSELFSGLPQKKIVVEFSSPNVAKKFHVGHLRSTVIGNFIANLKEALGHQVIRINYLG 172 Query: 169 DAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS-------- 219 D G Q L + Y++ L +N P + VY++ V KE AD S Sbjct: 173 DWGMQFGLLGTGFQLFGYEEKLQSN----PLQHLFEVYVQ-VNKEAADDKSVAKAAQEFF 227 Query: 220 ELLNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276 + L + + L + +D S++ +++ K L + D + S + F+R +++ Sbjct: 228 QRLELGDVQALSLWQKFRDLSIEEYIRV----YKRLGVYFDEY-SGESFYR---EKSQEV 279 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFA 335 + L +G + + I K T D+ GD +++SDG+ Y Sbjct: 280 LKLLESKGLLLKTI------KGTAVVDLSGN---------GDPSSICTVMRSDGTSLYAT 324 Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394 DLA + ++ FD MIYV + +++ + + A+ C+ V Sbjct: 325 RDLAAAVDRMDKYNFDTMIYVTDKGQKKHFQQVFQMLKIMGYDWAE----RCQHVPF--- 377 Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL-----------------LDF 437 G+ M R GD L V++E+ ++ M + EL DF Sbjct: 378 GVVQGMKTRRGDVTFLEDVLNEIQLRMLQNMASIKTTKELKNPQETAERVGLAALIIQDF 437 Query: 438 DFCKVKE---------QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488 + + QS+ + ++QY +AR S+ + F N Sbjct: 438 KGLLLSDYKFSWDRVFQSRGDTGVFLQYTHARLHSL---------EETFGCGYLN----- 483 Query: 489 SEFDTSELQ------LIVHLAEYPRVIENATIAQEPYKLAFYLYD---LASVFHGHWSHG 539 +F+T+ LQ ++ HL + V+ ++ +P + YL LA+V H Sbjct: 484 -DFNTACLQEPQSVSILQHLLRFDEVLYKSSQDFQPRHIVSYLLTLSHLAAVAHKTLQIK 542 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 P ++ RL L AV S++ +G+ ++G+ Sbjct: 543 DSPP----------EVAGARLHLFKAVRSVLANGMKLLGI 572 >gi|226356003|ref|YP_002785743.1| arginyl-tRNA synthetase [Deinococcus deserti VCD115] Length = 633 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 12/161 (7%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS-YLRKI 101 G T AA +++ G +P IA + +++ + V AG F+N +L + ++R + Sbjct: 59 GDYGTPAAFQMAKSAGGNPAQIAAQLAQTVQLPTGIKRVEAAGP-FLNFFLDTAMFVRDV 117 Query: 102 LSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161 + + V + G KV IE S NP +HVGH R V+GD++A + +G+ V Sbjct: 118 VENPFV--------MPSLGGKVVIEHTSVNPNKELHVGHLRNVVLGDSMARIFRAAGHTV 169 Query: 162 TREYYINDAGAQINT--LALSVFWRYQQALYNNDSDLPEGY 200 + YI+D G Q A++ + R D L EGY Sbjct: 170 EVQNYIDDTGRQAAEALFAINHYHREWDGTQKYDHWLGEGY 210 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 12/176 (6%) Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 + +G ++RF ML + + +DF + + + + YVQYA R SI R+A++ Sbjct: 467 IARRIGIGAIRFAMLKAEPTRKIDFRWEQALALNGDT-APYVQYAAVRAASILRKAQEAG 525 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 +++ + +P +L L +A P V+ + P+ +A Y DLA+ F Sbjct: 526 HNINGSGADWDALPD------VDLALAKMVARLPEVVAQSVRVHSPHVVAQYALDLATAF 579 Query: 533 HGHWSHGRE---NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + W + ++ P +Q+ L RL LV + L++IG+E P M Sbjct: 580 NA-WFNAKDRQGKPATNVLQSEP-GLREARLALVGRLRRAFEETLDLIGIEVPAAM 633 >gi|330467703|ref|YP_004405446.1| arginyl-tRNA synthetase [Verrucosispora maris AB-18-032] gi|328810674|gb|AEB44846.1| arginyl-tRNA synthetase [Verrucosispora maris AB-18-032] Length = 573 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 75/303 (24%), Positives = 123/303 (40%), Gaps = 59/303 (19%) Query: 318 DDVDRPLL--KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAV 374 D PL+ K DG + Y A DLA + + E D ++YV+ + S + + A Sbjct: 295 DGAPSPLIVRKRDGGFGYAATDLAALRQRVAELHADRLLYVVDARQSLHFTMVFDTARRA 354 Query: 375 SEKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433 Q++ + L DG P K RAGD + L ++ E D R ++ KN E Sbjct: 355 GWLPPQVSAVHVAFGTVLGPDGRPFK--TRAGDTVRLVDLLTEA-VDRAR-EVVAAKNPE 410 Query: 434 LL-------------------DFDFCKVKEQSKE---------NPVFYVQYAYARCRSIF 465 L D + ++ + + N Y+QYA+AR RS+ Sbjct: 411 LTGAALHERARQVGIGAVKYADLATSRTRDHTYDPQRMLALTGNTGVYLQYAHARIRSLL 470 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 +A D P + + + +E LI+ L + + EP++L YL Sbjct: 471 ARAGD----------PAITVDPTTTLEPAERALILDLDGFADTLTEVLAHYEPHRLCGYL 520 Query: 526 YDLASVFHGHWSHGRENPRLRF---VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 Y LA F + H P LR V++N RL L H +++GL+++G+ +P Sbjct: 521 YRLAQTFTTFYEH---CPVLRAPDPVRSN-------RLALCHLTGDTLHTGLSLLGIPAP 570 Query: 583 NEM 585 + Sbjct: 571 THL 573 Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 40/142 (28%), Positives = 61/142 (42%), Gaps = 7/142 (4%) Query: 38 RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 R H + + +R L P IA +V ++ D V V AG GF+NL L+ Sbjct: 31 RRSEHADFQADGVLAAARTLRRRPRDIAAEVVEALRADDLVAEV--AGPGFVNLDLAD-- 86 Query: 98 LRKILSSIV--VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMA 155 R +L+ + ++ G G +++ N MHVGH R ++GD L ++ Sbjct: 87 -RTLLTQLAGRLADPRLGVGTPETGITTVVDYSQPNIAKEMHVGHLRSTIIGDALVRILE 145 Query: 156 FSGYEVTREYYINDAGAQINTL 177 G V R +I D G Q L Sbjct: 146 HLGGTVVRRNHIGDWGTQFGML 167 >gi|297810839|ref|XP_002873303.1| hypothetical protein ARALYDRAFT_349990 [Arabidopsis lyrata subsp. lyrata] gi|297319140|gb|EFH49562.1| hypothetical protein ARALYDRAFT_349990 [Arabidopsis lyrata subsp. lyrata] Length = 417 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 91/181 (50%), Gaps = 20/181 (11%) Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE-YGRNLIGKGTKVNI 125 LIV+ V S + G GFIN+ +S ++ K + +++++GI+ + L K + + Sbjct: 74 LIVSNFPASEMVKSCSVTGCGFINVVISSDFMAKSIENMLINGIDTWAPTLPVK--RAVV 131 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 +F S + +HVGH R ++GDT+A L+ +S +V R ++ D G Q+ + +F + Sbjct: 132 DFYSPSIAKQLHVGHLRSPIIGDTIARLLEYSKVQVVRRNHVGDWGTQLGLIIEYLFEDF 191 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245 ND+ + Y +Y+K K F E+ P+ K+ + +A++++ Sbjct: 192 PG--LPNDAVITIEYIEALYIKSKAK------------FDED---PVFKEKAKRALVRLQ 234 Query: 246 R 246 R Sbjct: 235 R 235 >gi|116250831|ref|YP_766669.1| arginyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841] gi|115255479|emb|CAK06555.1| putative arginyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841] Length = 568 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 123/553 (22%), Positives = 214/553 (38%), Gaps = 100/553 (18%) Query: 79 DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138 + V +AG GF+N L+ + + ++++ + I+F N +HV Sbjct: 70 EDVSVAGPGFVNFRLADAVVAAEATAMLADPSLAAEK--ADPMRTVIDFGGPNVAKALHV 127 Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN----TLALSVFWRYQQALYNNDS 194 GH R V+G++L ++ G++V + ++ D G Q+ AL+ W+ Sbjct: 128 GHLRSFVIGESLRRILVEIGHDVLSDIHLGDWGLQMGKLLLGAALAAGWKA--------G 179 Query: 195 DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ------------AMM 242 DL P + +EL Y S +E L + + + + A M Sbjct: 180 DLTSFIDPLAFEAMTVEELGALYMSGNAACEDEALLALARILTTKLQDGDPLLTAAWARM 239 Query: 243 KI-----IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 + I D + L+ D+ E D H + + ++D+L +G + S+ Sbjct: 240 RAISLASISDTAEMLDAHFDLLQGESDAH----AEVAPMLDDLMARGLARQ-------SE 288 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKY-ERGFDNMIY 354 D+ L D+V PLL KSDG+ Y DLA + + E G ++Y Sbjct: 289 GALIIDVSADGL-------PDNVP-PLLLRKSDGAALYGTTDLATLRQRVREIGARQIVY 340 Query: 355 VMGSDHSGYVKRL-EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 + ++ + A A + ++ VR DG P K R G +LR + Sbjct: 341 CTDDRQALHISSVFSAARKAGYAEGVELRHATFGTVR-GNDGRPFK--TRDGFAASLREM 397 Query: 414 VD-----------------EVGSDSVRFMMLW--RKNSELLDFDFCKVKEQSKENPVFYV 454 +D VG +++F L RK + D D + + + P Y+ Sbjct: 398 IDLALTKSSEKVADSQAATVVGLGALKFADLSTPRKTGYVFDIDK-MISSEGRTGP--YL 454 Query: 455 QYAYARCRSIFRQAKD--IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 QYAYAR SI +A++ I P D S SE +++ YP + A Sbjct: 455 QYAYARICSILDKAEEAGITPAAD----------TVSISHPSERAVLIECLWYPHSLSEA 504 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572 EP+++A Y +A F ++ + P L+ + RL VA +I Sbjct: 505 ARHLEPFEIADRAYQVADAFSRFYT---DCPVLKAEDPSG------RLATCKLVARVIGK 555 Query: 573 GLNIIGVESPNEM 585 L ++G+ + M Sbjct: 556 CLELLGIGTVRRM 568 >gi|149173496|ref|ZP_01852126.1| arginyl-tRNA synthetase [Planctomyces maris DSM 8797] gi|148847678|gb|EDL62011.1| arginyl-tRNA synthetase [Planctomyces maris DSM 8797] Length = 393 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 71/294 (24%), Positives = 126/294 (42%), Gaps = 50/294 (17%) Query: 326 KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 K DG++TY DLA K + E D ++YV+ S S + + L A + ++ + Sbjct: 116 KQDGAFTYATTDLATIKYRAEELKADRVLYVVDSRQSEHFQLLFATVNEWGFQNLELQHV 175 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------------- 416 V L +DG P+K RAGD + L ++DE Sbjct: 176 SFGSV-LGKDGKPLKT--RAGDNVGLESLLDESIQRAYAIIAENDDAKPEGSELSEERRQ 232 Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 +G +++ L FD+ K+ ++ + Y+QYAYAR IFR+ Sbjct: 233 EIAEIIGLGGIKYADLKHNRDSDYMFDWDKML-ANRGDTATYMQYAYARVCGIFRKG--- 288 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 ++D N + + D +E L + + Y +E+ I P L YL++L+++ Sbjct: 289 --EIDRVTLRENQSALKLQ-DETERALALQINRYSETLESVAIEARPNYLTNYLFELSNL 345 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F ++ + P L+ A ++ RL L A +I+ GL+++G+ + M Sbjct: 346 FSTFYN---QCPVLK---AEEEQVKSSRLLLCDLTARVIDHGLSLLGIRTCERM 393 >gi|404607|gb|AAD10550.1| uncertain [Mycoplasma genitalium] Length = 106 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 30/80 (37%), Positives = 49/80 (61%) Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 + LY++ +++SKRAG+ IT+ ++ + D+ R+ ML + N ++ D Q+ Sbjct: 6 ITLYKNKELVRLSKRAGNVITIETMLSMISEDAARWFMLSQNNGTIIKIDLDIANLQNSA 65 Query: 449 NPVFYVQYAYARCRSIFRQA 468 NPV+YVQYA+AR SI R A Sbjct: 66 NPVYYVQYAFARMNSILRIA 85 >gi|237837873|ref|XP_002368234.1| arginyl-tRNA synthetase, putative [Toxoplasma gondii ME49] gi|211965898|gb|EEB01094.1| arginyl-tRNA synthetase, putative [Toxoplasma gondii ME49] gi|221508998|gb|EEE34567.1| arginyl-tRNA synthetase, putative [Toxoplasma gondii VEG] Length = 861 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 3/92 (3%) Query: 83 IAGKGFINLYLSPSYLRKILSSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139 ++G+GFIN LS +YL L +++ SG G + ++ +++ S N +HVG Sbjct: 72 VSGRGFINFRLSSNYLASRLVDMLLNTESGSCLGFQKVETPERIVVDYASPNICKDLHVG 131 Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 H R AVVGDTLA+L+ F+G+ V R ++ D G Sbjct: 132 HLRSAVVGDTLANLLEFAGHRVFRHNHLGDFG 163 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 29/148 (19%) Query: 447 KENPVFYVQYAYARCRSIFRQAK-------------DIFPDLDFDLFPRNVIPQESEFDT 493 K N Y+ Y+ R + I R+A ++ D+ + L RN + + Sbjct: 726 KGNTAPYILYSLVRVKGILRRAGWAAGIPSELRGKPNLLSDMVYHLH-RNDLDR------ 778 Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553 QL V L + IE+A P KL YLY + +F+ + +A + Sbjct: 779 ---QLGVRLLGFAIAIEDAIQTLMPSKLTAYLYSVCLLFNAFYEE------CEVTKATDE 829 Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVES 581 L + RL LVH V ++ L+++G+++ Sbjct: 830 GLRLTRLLLVHGVRQVLEKCLDLLGIQA 857 >gi|114608416|ref|XP_518630.2| PREDICTED: probable arginyl-tRNA synthetase, mitochondrial [Pan troglodytes] Length = 578 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 129/580 (22%), Positives = 237/580 (40%), Gaps = 118/580 (20%) Query: 54 SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEY 112 SRP D A+ + +++ D V + G+ +N ++ L K +L ++ G +Y Sbjct: 57 SRP---DIQVQAKRLAEKLRCDTVVSEI-STGQRTVNFKINRELLTKTVLQQVIEDGSKY 112 Query: 113 G-RNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168 G ++ + G K+ +EF S N HVGH R ++G+ +A+L G++V R Y+ Sbjct: 113 GLKSELFSGLPQKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVIRINYLG 172 Query: 169 DAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-----KYSSEL- 221 D G Q L + Y++ L +N P + VY++ V KE AD K + E Sbjct: 173 DWGMQFGLLGTGFQLFGYEEKLQSN----PLQHLFEVYVQ-VNKEAADDKSVAKAAQEFF 227 Query: 222 --LNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276 L + + L + +D S++ +++ K L + D + S + F+R +++ Sbjct: 228 QRLELGDVQALSLWQKFRDLSIEEYIRV----YKRLGVYFDEY-SGESFYR---EKSQEV 279 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFA 335 + L +G + + I K T D+ GD +++SDG+ Y Sbjct: 280 LKLLESKGLLLKTI------KGTAVVDLSGN---------GDPSSICTVMRSDGTSLYAT 324 Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394 DLA + ++ FD MIYV + +++ + + A+ C+ V Sbjct: 325 RDLAAAIDRMDKYNFDTMIYVTDKGQEKHFQQVFQMLKIMGYDWAE----RCQHVPF--- 377 Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL-----------------LDF 437 G+ M R GD L V++E+ ++ M + EL DF Sbjct: 378 GVVQGMKTRRGDVTFLEDVLNEIQLRMLQNMASIKTTKELKNPQETAERVGLAALIIQDF 437 Query: 438 DFCKVKE---------QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488 + + QS+ + ++QY +AR S+ + F N Sbjct: 438 KGLLLSDYKFSWDRVFQSRGDTGVFLQYTHARLHSL---------EETFGCGYLN----- 483 Query: 489 SEFDTSELQ------LIVHLAEYPRVIENATIAQEPYKLAFYLYD---LASVFHGHWSHG 539 +F+T+ LQ ++ HL + V+ ++ +P + YL LA+V H Sbjct: 484 -DFNTACLQEPQSVSILQHLLRFDEVLYKSSQDFQPRHIVSYLLTLSHLAAVAHKTLQIK 542 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 P ++ RL L AV S++ +G+ ++G+ Sbjct: 543 DSPP----------EVAGARLHLFKAVRSVLANGMKLLGI 572 >gi|197100773|ref|NP_064716.2| probable arginyl-tRNA synthetase, mitochondrial precursor [Homo sapiens] gi|74744409|sp|Q5T160|SYRM_HUMAN RecName: Full=Probable arginyl-tRNA synthetase, mitochondrial; AltName: Full=Arginine--tRNA ligase; Short=ArgRS; AltName: Full=Arginyl-tRNA synthetase-like; Flags: Precursor gi|55859660|emb|CAI10899.1| arginyl-tRNA synthetase 2, mitochondrial [Homo sapiens] gi|56203448|emb|CAI20376.1| arginyl-tRNA synthetase 2, mitochondrial [Homo sapiens] gi|119568969|gb|EAW48584.1| arginyl-tRNA synthetase-like, isoform CRA_a [Homo sapiens] gi|189055050|dbj|BAG38034.1| unnamed protein product [Homo sapiens] Length = 578 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 129/580 (22%), Positives = 237/580 (40%), Gaps = 118/580 (20%) Query: 54 SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEY 112 SRP D A+ + +++ D V + G+ +N ++ L K +L ++ G +Y Sbjct: 57 SRP---DIQVQAKRLAEKLRCDTVVSEI-STGQRTVNFKINRELLTKTVLQQVIEDGSKY 112 Query: 113 G-RNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168 G ++ + G K+ +EF S N HVGH R ++G+ +A+L G++V R Y+ Sbjct: 113 GLKSELFSGLPQKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVIRINYLG 172 Query: 169 DAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-----KYSSEL- 221 D G Q L + Y++ L +N P + VY++ V KE AD K + E Sbjct: 173 DWGMQFGLLGTGFQLFGYEEKLQSN----PLQHLFEVYVQ-VNKEAADDKSVAKAAQEFF 227 Query: 222 --LNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276 L + + L + +D S++ +++ K L + D + S + F+R +++ Sbjct: 228 QRLELGDVQALSLWQKFRDLSIEEYIRV----YKRLGVYFDEY-SGESFYR---EKSQEV 279 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFA 335 + L +G + + I K T D+ GD +++SDG+ Y Sbjct: 280 LKLLESKGLLLKTI------KGTAVVDLSGN---------GDPSSICTVMRSDGTSLYAT 324 Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394 DLA + ++ FD MIYV + +++ + + A+ C+ V Sbjct: 325 RDLAAAIDRMDKYNFDTMIYVTDKGQKKHFQQVFQMLKIMGYDWAE----RCQHVPF--- 377 Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL-----------------LDF 437 G+ M R GD L V++E+ ++ M + EL DF Sbjct: 378 GVVQGMKTRRGDVTFLEDVLNEIQLRMLQNMASIKTTKELKNPQETAERVGLAALIIQDF 437 Query: 438 DFCKVKE---------QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488 + + QS+ + ++QY +AR S+ + F N Sbjct: 438 KGLLLSDYKFSWDRVFQSRGDTGVFLQYTHARLHSL---------EETFGCGYLN----- 483 Query: 489 SEFDTSELQ------LIVHLAEYPRVIENATIAQEPYKLAFYLYD---LASVFHGHWSHG 539 +F+T+ LQ ++ HL + V+ ++ +P + YL LA+V H Sbjct: 484 -DFNTACLQEPQSVSILQHLLRFDEVLYKSSQDFQPRHIVSYLLTLSHLAAVAHKTLQIK 542 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 P ++ RL L AV S++ +G+ ++G+ Sbjct: 543 DSPP----------EVAGARLHLFKAVRSVLANGMKLLGI 572 >gi|221488492|gb|EEE26706.1| hypothetical protein TGGT1_113470 [Toxoplasma gondii GT1] Length = 861 Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 3/92 (3%) Query: 83 IAGKGFINLYLSPSYLRKILSSIVV---SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139 ++G+GFIN LS +YL L +++ SG G + ++ +++ S N +HVG Sbjct: 72 VSGRGFINFRLSTNYLASRLVDMLLNTESGSCLGFQKVETPERIVVDYASPNICKDLHVG 131 Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 H R AVVGDTLA+L+ F+G+ V R ++ D G Sbjct: 132 HLRSAVVGDTLANLLEFAGHRVFRHNHLGDFG 163 Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust. Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 29/148 (19%) Query: 447 KENPVFYVQYAYARCRSIFRQAK-------------DIFPDLDFDLFPRNVIPQESEFDT 493 K N Y+ Y+ R + I R+A ++ D+ + L RN + + Sbjct: 726 KGNTAPYILYSLVRVKGILRRAGWAAGIPSELRGKPNLLSDMVYHLH-RNDLDR------ 778 Query: 494 SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR 553 QL V L + IE+A P KL YLY + +F+ + +A + Sbjct: 779 ---QLGVRLLGFAIAIEDAIQTLMPSKLTAYLYSVCLLFNAFYEE------CEVTKATDE 829 Query: 554 KLTMMRLQLVHAVASIINSGLNIIGVES 581 L + RL LVH V ++ L+++G+++ Sbjct: 830 GLRLTRLLLVHGVRQVLEKCLDLLGIQA 857 >gi|116624961|ref|YP_827117.1| arginyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076] gi|116228123|gb|ABJ86832.1| arginyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076] Length = 642 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 6/143 (4%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + IE+PR G ++ AA L++ L P IA +V I V S+ +AG G+IN+ Sbjct: 27 VSIEQPRQSDFGEIAVPAAFQLAKQLRQAPKKIAAELVDEIGPIAGVASLEVAGNGYINI 86 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L R ++ +VSG G G K+ +E + NP H+GH R A +GDT Sbjct: 87 RLD----RGAYAAALVSGAG--EAAAGSGGKIIVEHTNINPNKAAHIGHLRNATLGDTFV 140 Query: 152 SLMAFSGYEVTREYYINDAGAQI 174 ++ G +V + YI++ G Q+ Sbjct: 141 RMLRAGGKQVEVQNYIDNTGVQV 163 >gi|167043988|gb|ABZ08674.1| putative DALR anticodon binding domain protein [uncultured marine crenarchaeote HF4000_APKG3K8] Length = 623 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 87/173 (50%), Gaps = 23/173 (13%) Query: 13 NYLKEIDCKIKVEKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 N +KE KI + +K D++ V+E R G ++ N A +L++ L +P IA+ A Sbjct: 8 NRVKENTSKI-INEKGYDKVDFVVEYSR-SGFGDITCNVAFLLAKNLKKNPQEIAQEFAA 65 Query: 71 RIKIDPDVDSVFIAGKGFINLYLS---------PSYLRKILSSIVVSGIEYGRNLIGKGT 121 + D++ V G++N +++ P L++ YG IGK + Sbjct: 66 EYILGNDLEKVEAHKSGYLNFFINNNSFNNTVLPESLKE----------NYGSIDIGKNS 115 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 K+ +E S NP +H+GH R +GD ++ +++ + Y+V Y++D+G Q+ Sbjct: 116 KLVVEHTSVNPNKALHIGHLRNVAIGDAVSRILSKANYDVKVLNYVDDSGLQV 168 Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust. Identities = 37/180 (20%), Positives = 77/180 (42%), Gaps = 16/180 (8%) Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 D +L + V ++R+ ++ +++ FD + + + Y+QY+ R I Sbjct: 460 DDASLNEIAHNVAVGTIRYELIKPDLGKIITFDI-NTSLKLEGDTCSYIQYSCVRAARIL 518 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 ++ P+ D N +E++T+ LI + + + +A P +A Y Sbjct: 519 EKSGS-EPNFDVQFDQLN-----TEYETN---LIKQIGLFEIFVNDAAKNHSPKVIAKYC 569 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 YDLA F + H + ++A+ +L R LV + + L+++G+ +P M Sbjct: 570 YDLAVAFSSFYEH------VNVLKADTPELINARSCLVSSFKLTLEKALDLLGITAPQRM 623 >gi|304320020|ref|YP_003853663.1| arginyl-tRNA synthetase [Parvularcula bermudensis HTCC2503] gi|303298923|gb|ADM08522.1| arginyl-tRNA synthetase [Parvularcula bermudensis HTCC2503] Length = 592 Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 124/582 (21%), Positives = 225/582 (38%), Gaps = 102/582 (17%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSG-IEYGRNLIG 118 +P I E + R+ +P + V +AG GF+NL + L + +S+ + + + Sbjct: 57 NPRAIGEAVKRRLDDNPIFEKVELAGPGFLNLTPADGALAEAAASLSTDPHLGAWQRPVD 116 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 + + +++ N P+HVGH R A++G++L L G +V + ++ D G Q+ L Sbjct: 117 ERQTIILDYGGPNVAKPLHVGHLRAAIIGESLKRLFRAVGDDVLGDIHLGDWGLQMGQL- 175 Query: 179 LSVFWRYQQALYNNDSDLPEGYYP-----------GVYLKHVGKELAD---KYSSELLNF 224 ++ Q L D+D G YP +Y + AD + +++ Sbjct: 176 ITQLAEEQPDLPYFDADF-TGPYPTQSPVTVDDLAALYPRASAASKADPDRRAAAQAATM 234 Query: 225 PEEKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281 ++ P + + V + D L + D++ E I + + L Sbjct: 235 DLQQGRPGYRALWAHFVDVSKAALEADYAELGVTFDLWRGEASVQ----DRIGPLTERLK 290 Query: 282 RQGYVYEGILPPPKSKTTQKCDMDR---KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 +G V E S+ D+ R K+ L M+ KS+GS Y + D+ Sbjct: 291 AKGVVTE-------SEGALVIDVAREADKKTLNPVMMI---------KSNGSVGYHSTDV 334 Query: 339 AYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR---- 393 A + + E G + ++YV+ + + E V AV E+ I E Sbjct: 335 ATIEERVEEFGAERIVYVVDQRQA---QHFEEVFRAV-ERAGLIEADRLEHAGFGTMNGP 390 Query: 394 DGMPIKMSKRAGDFITLRHVVDE-----------------------------VGSDSVRF 424 DG P K R G + LR ++D+ VG +++F Sbjct: 391 DGRPFKT--REGGVLRLRDLIDQVVEAARRRLAEGGFSADEDSAVREDTARKVGIAALKF 448 Query: 425 MMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 L + FD + V + K P Y+ Y R RS+ +A + PD + Sbjct: 449 GDLSNPRTSDYVFDVDRFVTFEGKTGP--YLLYGVVRVRSVIAKAGE-RPDPAAPIL--- 502 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 D +E QL++ ++ Y +E A + P+ + + Y LA F ++H Sbjct: 503 ------LTDEAERQLVLEMSLYGDAVEAAYRRRLPHLICDHAYRLAQAFSRFYTH----- 551 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R + + RL L A + + L ++G++ P +M Sbjct: 552 -CRIGDEADPAVRASRLALALLTARQLEAALTLLGIDVPEKM 592 >gi|229096711|ref|ZP_04227682.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock3-29] gi|228686917|gb|EEL40824.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock3-29] Length = 562 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 75/289 (25%), Positives = 127/289 (43%), Gaps = 55/289 (19%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHS---------------GYVKRL 367 KSDG+ Y DL Y + Y FD +YV+G + S +V + Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--AFDKALYVVGLEQSLHFNQFFTVLKKLGYNWVDGM 357 Query: 368 EAV--------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 E V +S +K ++ +LL E++ D + ++ + V +VG Sbjct: 358 EHVPFGFILKDGKKMSTRKGRV-ILLEEVLEEAIDLAKQNIEEKNPNLKQKEEVAKQVGV 416 Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 +V F L KN + + +F +K + + P YVQY +AR SI R+ F Sbjct: 417 GAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSILRKESVEFETCT 472 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 F L D ++ L ++ +VIE A EP ++ Y+ D+A F+ ++ Sbjct: 473 FALK-----------DDHSWSVVKLLNKFRQVIEAAFNKNEPSIISKYVLDVAQSFNKYY 521 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +R ++ + K + RL LV+AV ++ GL ++GVE+P EM Sbjct: 522 GN------VRILEESKEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 562 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 ++ ++ L I + +ILD +IE P+ G + L++ P IA Sbjct: 2 EYKTQFAKSLSNIFVNELTQNQILD--LIETPKQDEFGD-AAFPCFSLAKQYKKSPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + I ++ DP V G ++N++ + + +L +I+ EYG+N G V Sbjct: 59 KEIAEKVN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTILAKKEEYGQNYFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|229115688|ref|ZP_04245093.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock1-3] gi|228667830|gb|EEL23267.1| Arginyl-tRNA synthetase 2 [Bacillus cereus Rock1-3] Length = 562 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 75/289 (25%), Positives = 127/289 (43%), Gaps = 55/289 (19%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHS---------------GYVKRL 367 KSDG+ Y DL Y + Y FD +YV+G + S +V + Sbjct: 300 KSDGATIYATRDLTAALYRQNTY--AFDKALYVVGLEQSLHFNQFFTVLKKLGYNWVDGM 357 Query: 368 EAV--------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 E V +S +K ++ +LL E++ D + ++ + V +VG Sbjct: 358 EHVPFGFILKDGKKMSTRKGRV-ILLEEVLEEAIDLAKQNIEEKNPNLKQKEEVAKQVGV 416 Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 +V F L KN + + +F +K + + P YVQY +AR SI R+ F Sbjct: 417 GAVIFHDL--KNERMHNIEFSLENMLKFEGETGP--YVQYTHARACSILRKESVEFETCT 472 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 F L D ++ L ++ +VIE A EP ++ Y+ D+A F+ ++ Sbjct: 473 FALK-----------DDHSWSVVKLLNKFRQVIEAAFNKNEPSIISKYVLDVAQSFNKYY 521 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +R ++ + K + RL LV+AV ++ GL ++GVE+P EM Sbjct: 522 GN------VRILEESKEKDS--RLALVYAVTVVLKEGLRLLGVEAPEEM 562 Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 ++ ++ L I + +ILD +IE P+ G + L++ P IA Sbjct: 2 EYKTQFAKSLSNIFVNELTQNQILD--LIETPKQDEFGD-AAFPCFSLAKQYEKSPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + I ++ DP V G ++N++ + + +L +I+ EYG+N G V Sbjct: 59 KEIAEKVN-DPFFTKVEAVGP-YVNVFFNRETVSDAVLKTILAKKEEYGQNYFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|207080008|ref|NP_001128754.1| probable arginyl-tRNA synthetase, mitochondrial precursor [Pongo abelii] gi|75042508|sp|Q5REH3|SYRM_PONAB RecName: Full=Probable arginyl-tRNA synthetase, mitochondrial; AltName: Full=Arginine--tRNA ligase; Short=ArgRS; AltName: Full=Arginyl-tRNA synthetase-like; Flags: Precursor gi|14714568|gb|AAH10420.1| Arginyl-tRNA synthetase 2, mitochondrial [Homo sapiens] gi|55726121|emb|CAH89834.1| hypothetical protein [Pongo abelii] Length = 578 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 129/580 (22%), Positives = 236/580 (40%), Gaps = 118/580 (20%) Query: 54 SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEY 112 SRP D A+ + +++ D V + G+ +N ++ L K +L ++ G +Y Sbjct: 57 SRP---DIQVQAKRLAEKLRCDTVVSEI-STGQRTVNFKINRELLTKTVLQQVIEDGSKY 112 Query: 113 G-RNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168 G ++ + G K+ +EF S N HVGH R ++G+ +A+L G++V R Y+ Sbjct: 113 GLKSELFSGLPQKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVIRINYLG 172 Query: 169 DAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-----KYSSEL- 221 D G Q L + Y++ L +N P + VY++ V KE AD K + E Sbjct: 173 DWGMQFGLLGTGFQLFGYEEKLQSN----PLQHLFEVYVQ-VNKEAADDKSVAKAAQEFF 227 Query: 222 --LNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276 L + + L + +D S++ +++ K L + D + S + F+R +++ Sbjct: 228 QRLELGDVQALSLWQKFRDLSIEEYIRV----YKRLGVYFDEY-SGESFYR---EKSQEV 279 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFA 335 + L +G + I K T D+ GD +++SDG+ Y Sbjct: 280 LKLLESKGLLLRTI------KGTAVVDLSGN---------GDPSSICTVMRSDGTSLYAT 324 Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394 DLA + ++ FD MIYV + +++ + + A+ C+ V Sbjct: 325 RDLAAAIDRMDKYNFDTMIYVTDKGQKKHFQQVFQMLKIMGYDWAE----RCQHVPF--- 377 Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL-----------------LDF 437 G+ M R GD L V++E+ ++ M + EL DF Sbjct: 378 GVVQGMKTRRGDVTFLEDVLNEIQLRMLQNMASIKTTKELKNPQETAERVGLAALIIQDF 437 Query: 438 DFCKVKE---------QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488 + + QS+ + ++QY +AR S+ + F N Sbjct: 438 KGLLLSDYKFSWDRVFQSRGDTGVFLQYTHARLHSL---------EETFGCGYLN----- 483 Query: 489 SEFDTSELQ------LIVHLAEYPRVIENATIAQEPYKLAFYLYD---LASVFHGHWSHG 539 +F+T+ LQ ++ HL + V+ ++ +P + YL LA+V H Sbjct: 484 -DFNTACLQEPQSVSILQHLLRFDEVLYKSSQDFQPRHIVSYLLTLSHLAAVAHKTLQIK 542 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 P ++ RL L AV S++ +G+ ++G+ Sbjct: 543 DSPP----------EVAGARLHLFKAVRSVLANGMKLLGI 572 >gi|270693073|ref|ZP_06222954.1| arginine--tRNA ligase [Haemophilus influenzae HK1212] gi|270316008|gb|EFA28051.1| arginine--tRNA ligase [Haemophilus influenzae HK1212] Length = 237 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 2/95 (2%) Query: 83 IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 IAG GFIN++L+P++L +S+ +S G K T V I++ S N MHVGH R Sbjct: 2 IAGPGFINIFLNPTWLTTEISA-ALSHKNLGIQATNKQTVV-IDYSSPNVAKEMHVGHLR 59 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 ++GD + + F G+ V R ++ D G Q L Sbjct: 60 STIIGDAVVRTLEFLGHNVIRANHVGDWGTQFGML 94 >gi|123387375|ref|XP_001299401.1| DALR anticodon binding domain containing protein [Trichomonas vaginalis G3] gi|121880240|gb|EAX86471.1| DALR anticodon binding domain containing protein [Trichomonas vaginalis G3] Length = 689 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 9/118 (7%) Query: 84 AGKGFINLYLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 A K ++N + + +I V S G EYG + + + V++E SANP +H+G+ R Sbjct: 81 ADKIYVNFKVDRAQCFQIAYDAVTSMGNEYGSSKLPEPKTVDVEHTSANPNASLHIGNLR 140 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 ++G LA L+ + GY V Y++ND GAQI A+ + R + PEGY Sbjct: 141 SVLIGAHLARLLKWVGYNVRELYFVNDLGAQIGLTAVG-YARL-------NGKFPEGY 190 >gi|225874400|ref|YP_002755859.1| arginine--tRNA ligase [Acidobacterium capsulatum ATCC 51196] gi|225794344|gb|ACO34434.1| arginine--tRNA ligase [Acidobacterium capsulatum ATCC 51196] Length = 689 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 15/153 (9%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP--DVDSVFIAGKGFINL 91 +E+P + G + A L+R L P IAE IVA + + P + +AG G+IN Sbjct: 35 VEQPPESKFGDYALPLAFELARALRKAPRKIAEEIVAALAVHPIPGFAAFEVAGAGYINA 94 Query: 92 YLS-PSYLRKILSSIVV--SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 L +++R + + G+ Y + +E S NP HVGH R A++GD Sbjct: 95 RLDRAAFVRDFVKRRMYWKQGLAY----------ILVEHTSINPNKAAHVGHLRNAILGD 144 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 T L+ G+ V + YI++ G Q+ + +++ Sbjct: 145 TFVRLLEAQGFLVGVQNYIDNTGVQVADIVVAL 177 >gi|322792442|gb|EFZ16426.1| hypothetical protein SINV_15311 [Solenopsis invicta] Length = 554 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 111/519 (21%), Positives = 209/519 (40%), Gaps = 110/519 (21%) Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175 + G + +EF S N P HVGH R ++G+ +A++ +F +V + Y+ D G Q Sbjct: 97 FMNNGKNIVVEFSSPNIAKPFHVGHLRSTIIGNYVANINSFVKNKVKKINYLGDWGTQYG 156 Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV-GKELADKYSS------ELLNFPE-- 226 + L + A D ++ +Y +V +LA+ SS ++ N E Sbjct: 157 LVQLG----FDMANIGED-EMRRSPIKALYTAYVTANKLAETDSSILDRARKIFNDLENG 211 Query: 227 -----EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281 E+W + K Y+V+ +LK + + I I+ D++H ++I Sbjct: 212 TVVTHEQW-KMFKQYTVE--------ELKT--VYNRIGITFDEYHWESMYSAKNI----- 255 Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341 E + K + + + DRK + +G++ + P++KSDGS Y A D+A Sbjct: 256 -----EEIVTLMEKMQLLTRDEQDRKVV-----SLGNEKNIPIIKSDGSTLYIARDIAAA 305 Query: 342 KCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400 ++E FD M YV+ + + + L + K+ Q+ E ++ + G M Sbjct: 306 IDRFENNYFDCMYYVVDNTQANHFLNLLEIL-----KRMQMP--WAERLKHVKFGRLQGM 358 Query: 401 SKRAGDFITLRHVVD---------EVGSDSVRFMM-------------------LWRKNS 432 R G+ + L ++D ++ S + + + L RK Sbjct: 359 RTRRGNAVFLEDILDTARDIVKQKQIDSPTTKVCLDSNDKSSDILGISAMIVNDLKRKRQ 418 Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492 FD+ + + V +QY + R S+ R I SE + Sbjct: 419 RDYTFDWNAAFDLKGDTGV-KLQYTHCRLISLERNCGAILI---------------SECE 462 Query: 493 TSELQ------LIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 S LQ L++ +A++ V+ + EP L YL++L++ + + +L Sbjct: 463 PSLLQEEIVDDLVILIAKFEEVVLRSYEEIEPCILTTYLFNLSNTINKAF-------KLL 515 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V+ + RL L H +++ G+ ++G+ EM Sbjct: 516 KVKDEVADVAKQRLLLFHVARNVLAQGMKLLGLIPLEEM 554 >gi|332218449|ref|XP_003258367.1| PREDICTED: LOW QUALITY PROTEIN: probable arginyl-tRNA synthetase, mitochondrial-like [Nomascus leucogenys] Length = 578 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 127/580 (21%), Positives = 236/580 (40%), Gaps = 118/580 (20%) Query: 54 SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEY 112 SRP D A+ + +++ D V + G+ +N ++ L K +L ++ G +Y Sbjct: 57 SRP---DIQVQAKRLAEKLRCDTVVSEI-STGQRTVNFKINRELLTKTVLQQVIEDGSKY 112 Query: 113 G-RNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168 G ++ + G K+ +EF S N HVGH R ++G+ +A+L G++V R Y+ Sbjct: 113 GLKSELFSGLPQKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVIRINYLG 172 Query: 169 DAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS-------- 219 D G Q L + Y++ L +N P + VY++ V KE AD S Sbjct: 173 DWGMQFGLLGTGFQLFGYEEKLQSN----PLQHLFEVYVQ-VNKEAADDKSVAKAAQEFF 227 Query: 220 ELLNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276 + L + + L + +D S++ +++ K L + D + S + F+R + + Sbjct: 228 QRLELGDVQALSLWQKFRDLSIEEYIRV----YKRLGVYFDEY-SGESFYREKSEEVLKL 282 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFA 335 +++ +G + + I K T D+ GD +++SDG+ Y Sbjct: 283 LES---KGLLLKTI------KGTAVVDLSGN---------GDPSSICTVMRSDGTSLYAT 324 Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394 DLA + ++ FD MIYV + +++ + + A+ C+ V Sbjct: 325 RDLAAAIDRMDKYNFDTMIYVTDKGXKKHFQQVFQMLKIMGFDWAE----RCQHVPF--- 377 Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL-----------------LDF 437 G+ M R GD L V++E+ ++ M + EL DF Sbjct: 378 GVVQGMKTRRGDVTFLEDVLNEIQLRMLQNMASIKTTKELKNPQETAERVGLAALIIQDF 437 Query: 438 DFCKVKE---------QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488 + + QS+ + ++QY +AR S+ + F N Sbjct: 438 KGLLLSDYKFSWDRVFQSRGDTGVFLQYTHARLHSL---------EETFGCGYLN----- 483 Query: 489 SEFDTSELQ------LIVHLAEYPRVIENATIAQEPYKLAFYLYD---LASVFHGHWSHG 539 +F+T+ LQ ++ HL + V+ ++ +P + YL LA+V H Sbjct: 484 -DFNTACLQEPQSVSILQHLLRFDEVLYKSSQDLQPRHIVSYLLTLSHLAAVAHKTLQIK 542 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 P ++ RL L AV S++ +G+ ++G+ Sbjct: 543 DSPP----------EVAGARLHLFKAVRSVLANGMRLLGI 572 >gi|260790573|ref|XP_002590316.1| hypothetical protein BRAFLDRAFT_58413 [Branchiostoma floridae] gi|229275508|gb|EEN46327.1| hypothetical protein BRAFLDRAFT_58413 [Branchiostoma floridae] Length = 496 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 87/337 (25%), Positives = 136/337 (40%), Gaps = 53/337 (15%) Query: 99 RKILSSIVVSGIEYGR--NLIG--KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154 R +LS + +YGR +L G KG KV +E+ S N P H GH R ++G+ +A L Sbjct: 74 RSVLSKVQEDREQYGRRSDLFGVRKGEKVVVEYSSPNIAKPFHAGHLRSTIIGNFIAKLH 133 Query: 155 AFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLK--HVGK 211 G +V R Y+ D G Q LA+ + ++AL N P + VY+K + Sbjct: 134 HALGNKVVRINYLGDWGVQFGLLAVGFQLFGSEEALQTN----PIQHLFEVYVKVNQAAE 189 Query: 212 ELAD--KYSSELLNFPEEK-------WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262 E D + + E E + W + S++ +I K L +Q D + E Sbjct: 190 ENEDIHRQAREFFRLLEHRDPTALALWTRF-RGLSIEEYSRI----YKRLGVQFDEYSGE 244 Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR-KQLLFRSTMVGDDVD 321 + D S + +I L G L + T D+ + F ST+ Sbjct: 245 SMY--SDRS--QQVISQLREAG------LLQTTERGTGVVDLSEDNSMSFYSTVT----- 289 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 +SDG+ Y D+A +YER FD M YV+ + ++L EK Sbjct: 290 ----RSDGTSLYITRDIAAAVDRYERFKFDRMYYVVDKSQEDHFRQL----FKTLEKMGY 341 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 C V+ G M R G+ + L +++E Sbjct: 342 TWADRCHHVKF---GRVQGMKTRRGEVVLLEDILNEA 375 >gi|281425987|ref|ZP_06256900.1| arginine--tRNA ligase [Prevotella oris F0302] gi|281399880|gb|EFB30711.1| arginine--tRNA ligase [Prevotella oris F0302] Length = 641 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 72/297 (24%), Positives = 125/297 (42%), Gaps = 56/297 (18%) Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 LL+SDG+ Y D+ +++ D MIYV+G++ + + + L + + K + Sbjct: 366 LLRSDGTSVYMTQDIGTADMRFKDFPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKEL 425 Query: 383 VLLC-ELVRL------YRDGMPI--------------KMSKRAGDFITL-----RHVVDE 416 V +V L R+G + K S G F + ++V Sbjct: 426 VHFSYGMVELPNGKMKSREGTVVDADDLIAAMIDDARKTSDELGKFKDMTEEEKQNVARI 485 Query: 417 VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG ++++ +L RKN E +DF+ N ++QY YAR RSI R+A Sbjct: 486 VGLGALKYFILKVDARKNMLFNPEESIDFN---------GNTGPFIQYTYARIRSILRKA 536 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 + ++ + E+ + E+QLI L E+ +E A P +A Y Y+L Sbjct: 537 EA------ENIAVPTTLSTEAPLNEKEIQLIQKLNEFGAAVEQAGKDYSPSGIANYCYEL 590 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ + + A+ + RL L VA +I +G+ ++G+E P M Sbjct: 591 TKDFNQFYHD------YSILNADTETEKITRLMLAKNVAKVIKNGMELLGIEVPERM 641 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 47/95 (49%) Query: 80 SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139 + F KGF+NL ++ +L+ I + + V IE+ S N P+H+G Sbjct: 111 AAFNVVKGFLNLTVAKEAWIGLLNDINADEKFGEKKVTDNSPLVMIEYSSPNTNKPLHLG 170 Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 H R ++G +LA +M +G +V + +ND G I Sbjct: 171 HVRNNLLGWSLAQIMEANGNKVVKTNIVNDRGIHI 205 >gi|325115167|emb|CBZ50723.1| arginyl-tRNAsynthetase, related [Neospora caninum Liverpool] Length = 594 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 6/141 (4%) Query: 43 GHLSTNAAMILSRPLGLDPLTI------AELIVARIKIDPDVDSVFIAGKGFINLYLSPS 96 G N+AM L + D L + E I +K +P +V + +GF+ + ++ Sbjct: 35 GDFQCNSAMALFKQKSKDELGVQSPKEAGEKIAEHLKGEPLFSNVQASPQGFVTVDVAGD 94 Query: 97 YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 +L + L ++ K +V ++F S N MHVGH R ++G+++ ++AF Sbjct: 95 WLSQDLKQVLRQKGPLQLPHADKKLRVMVDFSSPNVAKEMHVGHLRSTIIGESICRILAF 154 Query: 157 SGYEVTREYYINDAGAQINTL 177 G+EV R +I D G Q L Sbjct: 155 HGHEVQRINHIGDWGTQFGML 175 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 21/152 (13%) Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 + +G +V++ L + F + ++ + K N Y+ YAYAR +IFR+A Sbjct: 440 AAEAIGYSAVKYFDLKQNRHTDYKFSYDRMLD-PKGNTAVYMMYAYARICAIFRKAGVDI 498 Query: 473 PDLDFDLFPRNVIPQESEFDT-SELQLIVHLAEYPRVIENATIAQE--PYKLAFYLYDLA 529 LD P+E + + +E +L V LA++P V+ ATI ++ ++LA Y+Y ++ Sbjct: 499 STLD---------PEELKIEEPAERKLAVTLAQFPDVL--ATIVEDLHIHRLAEYMYKVS 547 Query: 530 SVFHGHWSH-----GR-ENPRLRFVQANNRKL 555 F + GR +N RL +A + L Sbjct: 548 GAFTDFYQACKVLGGRQQNTRLLLCEATRKIL 579 >gi|15807552|ref|NP_296288.1| arginyl-tRNA synthetase [Deinococcus radiodurans R1] gi|39932240|sp|Q9RRC4|SYR_DEIRA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|6460396|gb|AAF12109.1|AE002086_1 arginyl-tRNA synthetase [Deinococcus radiodurans R1] Length = 609 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 16/198 (8%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D ++LK +++ ++ + +D + E P + G T AA +++ G +P IA Sbjct: 2 DLKAQLKAAVEQAAHQMGMP---VDAAIQETPANKP-GDYGTPAAFQMAKAAGGNPAQIA 57 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYL-SPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 + + + + V G F+N +L + +++R + +E L + KV Sbjct: 58 AQLAQTVVLPAGIRRVEATGP-FLNFFLDAGAFVRGV--------VERPFELPKREGKVV 108 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI--NTLALSVF 182 IE S NP +HVGH R V+GD++A ++ +G+ V + YI+D G Q + A + Sbjct: 109 IEHTSVNPNKELHVGHLRNVVLGDSMARILRAAGHTVEVQNYIDDTGRQAAESLFATQHY 168 Query: 183 WRYQQALYNNDSDLPEGY 200 R + D L EGY Sbjct: 169 GRVWDGVQKYDQWLGEGY 186 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 12/177 (6%) Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 + +G ++RF ML + + +DF + + + + YVQYA R +I ++A++ Sbjct: 442 EIARRIGLGAIRFAMLKAEPTRKIDFRWEQALALNGDT-APYVQYAAVRAANILKKAEEA 500 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 D + +P +L L +A+ P V A P+ +A Y DLA+ Sbjct: 501 GYATDGTGADWDALPD------IDLVLAKQIAKLPEVAAQAARIHSPHVVAQYALDLATS 554 Query: 532 FHGHWSHGRE---NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ W + + P +Q + L RL L+ + L++IG+E P M Sbjct: 555 FNA-WYNAKTKQGKPATNVLQ-SEEGLREARLALIVRLRKAFEDTLDLIGIEIPAAM 609 >gi|319900803|ref|YP_004160531.1| arginyl-tRNA synthetase [Bacteroides helcogenes P 36-108] gi|319415834|gb|ADV42945.1| arginyl-tRNA synthetase [Bacteroides helcogenes P 36-108] Length = 605 Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 72/307 (23%), Positives = 130/307 (42%), Gaps = 57/307 (18%) Query: 315 MVGDDVD-RPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAV-- 370 + G+ +D + LL++DG+ Y D+ K ++ + D MIYV+G++ + + + L + Sbjct: 320 LTGEGLDHKLLLRADGTSVYMTQDIGTAKLRFADYPIDKMIYVVGNEQNYHFQVLSILLD 379 Query: 371 AAAVSEKKAQIN-----VLLCELVRLYRDGMPIKMSKRAGDFI-TLRHVVDE-------- 416 K ++ V L E R+G + + I T + DE Sbjct: 380 KLGFEWGKGLVHFSYGMVELPEGKMKSREGTVVDADDLMAEMIETAKETSDELGKLDGLT 439 Query: 417 ----------VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAY 458 VG ++++ +L RKN E +DF+ N ++QY Y Sbjct: 440 KEEADNIARIVGLGALKYFILKVDARKNMTFNPKESIDFN---------GNTGPFIQYTY 490 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 AR +S+ R+AK+ ++ L P E E LI +A++ V++ A P Sbjct: 491 ARIQSVLRKAKEAGIEIPARL------PDGIELSEKEEGLIQMIADFASVVKQAGEDYSP 544 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 +A Y YDL ++ + ++ N L + RL L VA ++ G+ ++G Sbjct: 545 SVIANYTYDLVKEYNQFYHD------FSILREENEALKVFRLALSENVAKVVRLGMGLLG 598 Query: 579 VESPNEM 585 +E P+ M Sbjct: 599 IEVPDRM 605 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 6/112 (5%) Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYG-RNLIGKGTK 122 I E ++A +P V + F KGF+NL ++ S ++L+ I YG + K Sbjct: 63 IGEYLLAN---EPSV-AAFNVIKGFLNLTVASSAWIELLNGIHAES-SYGIVPVTDKSPL 117 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 V IE+ S N P+H+GH R ++G+ LA+++A +G +V + +ND G I Sbjct: 118 VMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHI 169 >gi|297159433|gb|ADI09145.1| arginyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1] Length = 602 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 74/303 (24%), Positives = 128/303 (42%), Gaps = 63/303 (20%) Query: 323 PLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAV---SE 376 PL+ KSDG + Y A DL+ + + + D+++YV+ + S + K + A + +E Sbjct: 323 PLIVQKSDGGFGYAATDLSAIRDRIQNLQADSLVYVVDARQSLHFKMVFETARRIGWLNE 382 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------- 416 K + + L +DG P K R G+ + L ++DE Sbjct: 383 KTHAYQLAFGTV--LGKDGKPFKT--REGETVRLGDLLDEAIERATAVVREKSKGKIDLT 438 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466 VG +V++ L + FD ++ + + V Y+QYAYAR +SI R Sbjct: 439 EEEIAERGAQVGIGAVKYADLSTSAARDYKFDLDQMVSLNGDTSV-YLQYAYARIQSILR 497 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 A + + V E +E L +HL ++ ++ EP+KLA YLY Sbjct: 498 LAGE---------GQKPVAHPELPLAPAERALGLHLDQFAEILREVAAGYEPHKLAAYLY 548 Query: 527 DLASVFHGHWSHGRENPRLRF----VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 LAS + + + P L+ Q N RL L A ++ G++++G+ +P Sbjct: 549 QLASFYTTFYD---KCPVLKAEGGPAQVEN------RLFLCDLTARTLHQGMDLLGIRTP 599 Query: 583 NEM 585 + Sbjct: 600 ERL 602 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 7/136 (5%) Query: 45 LSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSS 104 N + L++ L +P +A +V + + + ++G GF+N+ +S + K L++ Sbjct: 41 FQANGMLALAKKLKGNPRELAAKVVESLPAGELIADIEVSGPGFLNITVSDEAIVKTLAA 100 Query: 105 IVVS---GIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161 G+ Y + GT V +++ N MHVGH R AV+GD + ++ F+G +V Sbjct: 101 RAADARLGVPYAES---PGTTV-VDYAQPNVAKEMHVGHLRSAVIGDAVVRILEFAGEKV 156 Query: 162 TREYYINDAGAQINTL 177 R ++I D G Q L Sbjct: 157 VRRHHIGDWGTQFGML 172 >gi|322435660|ref|YP_004217872.1| Arginine--tRNA ligase [Acidobacterium sp. MP5ACTX9] gi|321163387|gb|ADW69092.1| Arginine--tRNA ligase [Acidobacterium sp. MP5ACTX9] Length = 674 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 19/156 (12%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID----PDVDSVFIA 84 L ++ +E+P A G L+ A L++ L P IA + + D P V SV +A Sbjct: 25 LTQLAVEQPPSIALGELALPVAFELAKRLRKAPRAIAMELAEALNGDLASLPGVASVEVA 84 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGR--NLIGKGTKVNIEFVSANPTGPMHVGHCR 142 G G++N+ L + V I R +L G G ++ IE S NP H+GH R Sbjct: 85 GAGYLNVRLD--------RAAAVQSIAADRHADLGGAGFRL-IEHTSINPNKAAHIGHLR 135 Query: 143 CAVVGDTLASLMA----FSGYEVTREYYINDAGAQI 174 A++GDT L+ +GY+V + YI++ G Q+ Sbjct: 136 NAILGDTFQRLLRKDEYKTGYDVGVQNYIDNTGVQV 171 >gi|303274520|ref|XP_003056579.1| arginyl-tRNA synthetase [Micromonas pusilla CCMP1545] gi|226462663|gb|EEH59955.1| arginyl-tRNA synthetase [Micromonas pusilla CCMP1545] Length = 654 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 132/592 (22%), Positives = 219/592 (36%), Gaps = 143/592 (24%) Query: 60 DPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115 +P ++AE I+ I P +S F +AG GFIN+ S +L + + + Sbjct: 130 NPRSLAEAIIQAI---PAENSFFEKLAVAGPGFINITFSREFLAQEALRVFHCSADGTFE 186 Query: 116 LIGKGTKVNIEFVSANPTGP--------MHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167 K K+ + + + P MHVGH R ++G+T+ + F G EV R ++ Sbjct: 187 TTRKFRKLTAKRAVVDYSSPNIAKEMQEMHVGHLRSTIIGETICRALEFVGVEVIRLNHV 246 Query: 168 NDAGAQINTL----------------ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 D G Q L L ++ + +++D D + V G Sbjct: 247 GDWGTQFGMLLAHLEDISESSDFEVKNLQELYKQSKIRFDSDEDFKKRARAAVVHLQAG- 305 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 DK+ +EKW I ++ R D + + D+ I E RG+ Sbjct: 306 ---DKH-------LKEKWTDIC---------EVSRQDFEEIYRLLDVHILE----RGES- 341 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQK---CDMDRKQLLFRSTMVGDDVDRPLL--K 326 Y ++P S+ +K D +F D D PL+ K Sbjct: 342 --------------YYNYLIPDVLSELIEKEIAVQSDGALCIF-----ADGSDSPLICRK 382 Query: 327 SDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE----KKAQI 381 S+GS+ Y + DLA + + D +IYV G K +A+ A S K+ Sbjct: 383 SNGSFNYASTDLAALWQRISDLCADWIIYVT---DVGQKKHFDAIFDAASRAGWLKRENG 439 Query: 382 NVLLCEL---VRLYRDGMPIKMSKRAGDFITLRHVVDEVGS------------------- 419 NV L + + + DG + R+GD + L+ ++ E S Sbjct: 440 NVSLDHVGFGLVMGVDGK--RFRTRSGDTVPLKSLLREAQSRCLDSLRGRESTLSDDELE 497 Query: 420 DSVRFMMLWR------KNSELLDFDFCKVKEQS-KENPVFYVQYAYARCRSIFRQAKDIF 472 D+ R M + N+ L ++ F + K N Y+ Y +AR S+ +A Sbjct: 498 DASRIMGVAAVKYADLHNNRLTNYTFSYERMLDLKGNTAVYLLYTHARISSLLERAH--- 554 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 D + N + + EF E L + + ++P V+E+ P +L Y Y L F Sbjct: 555 -TQDLEPLSINDLVLKDEF---ERVLALTIMKFPDVVESVVQDLLPSRLCDYTYSLCVTF 610 Query: 533 HGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + + G E R R L A A + +I+G+E Sbjct: 611 NEFYGSCKVLGGEQERSRTF-------------LCQATAISLRQCFHILGIE 649 >gi|328866635|gb|EGG15018.1| arginyl-tRNA synthetase [Dictyostelium fasciculatum] Length = 570 Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 118/491 (24%), Positives = 194/491 (39%), Gaps = 85/491 (17%) Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EF S N P H GH R ++G+ L +L GY+VT Y+ D G Q LA+ F R Sbjct: 123 LEFSSPNIAKPFHAGHLRSTIIGNFLVNLHRAVGYKVTSMNYLGDWGKQYGLLAIG-FER 181 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE-LLNFPEEKWLPIVKDYSVQAMM- 242 + ++ +L + P +L HV ++ + +E ++ + ++D V A+ Sbjct: 182 -----FGSEEELQKD--PIAHLFHVYVKINAQAETEPSIHDDARSYFKRMEDGDVDALAI 234 Query: 243 -KIIRD----DLKA----LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 K RD KA LN+ DI+ E G + D L + V E Sbjct: 235 WKRFRDVSIEKYKAIYARLNVSFDIYSGESLMCDG----MVHAYDKLVEKNLVIE----- 285 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNM 352 S+ + D++ +L K DGS Y D+A + E FD M Sbjct: 286 --SEGAKVIDLEAYKLGKVLVK----------KKDGSTLYITRDIAAANYRKEDLKFDKM 333 Query: 353 IYVMGSDHSGYVKRLEAV-------------------AAAVSEKKAQINVLLCELVRLYR 393 IYV+ S + ++L + +S +K + V L +++ + Sbjct: 334 IYVVASQQELHFRQLFKIVETMGYEWSKDLTHIGFGMVKGMSTRKGTV-VFLEDILNESK 392 Query: 394 DGMPIKMSKRAGDFITLR---HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKEN 449 M M K + + V D + +V K ++ DF++ ++ + Sbjct: 393 QIMGEVMKKNEAKYAEIEKPDEVADILAVSAVVIQDFSAKRNKDYDFNWDRMLSFEGDTG 452 Query: 450 PVFYVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 P Y+QYA+AR S+ R+ I D D L E E T L V + Y V Sbjct: 453 P--YLQYAHARLCSMERKNNVAINKDADLGLLT------EPEAYT----LAVTIGRYGDV 500 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 ++ A EP +A YL++L S + +V+ + L R L H Sbjct: 501 LQGALNNLEPNVVATYLFELCHAISSAHS-------VLYVKDREQNLAEARTALFHCAKI 553 Query: 569 IINSGLNIIGV 579 I+ +GL I+G+ Sbjct: 554 ILGNGLRILGL 564 >gi|85057596|ref|YP_456512.1| arginyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma AYWB] gi|84789701|gb|ABC65433.1| arginyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma AYWB] Length = 601 Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 133/570 (23%), Positives = 234/570 (41%), Gaps = 105/570 (18%) Query: 54 SRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIE 111 ++ + +P I E I +I I+ D +F+ GF+N+ L + L KIL I Sbjct: 87 AKKIKTNPHIIFENIKKKIVAINEIQDLIFL--NGFLNIKLKRASLAHKILIKINKLQTN 144 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG N + + I++ S N VGH R V+G+ L ++ G++V ++ D G Sbjct: 145 YG-NSPNQNQTIVIDYSSPNIAKNFSVGHLRSTVIGNALKNIYQKLGFKVVGINHLGDWG 203 Query: 172 AQINTL--ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK---ELADKYSSELLNFPE 226 Q + A + ++ L + ++L + Y V+ K EL ++ + L + Sbjct: 204 TQFGKMIVAYQKWGNKEKTLKDPINELQKLY---VFFHQKAKTNPELNEQANFAFLQLEQ 260 Query: 227 --EKWLPIVK---DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281 +K+L + K + S+Q KI +DI DF+ G+ S D I Sbjct: 261 QNQKYLDLWKWFREVSLQEFCKI-----------YDILGISFDFYLGE-SFYNDKI---- 304 Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV----GDDVDRPLL-KSDGSYTYFAA 336 +++E ++++K+LL V D++ L+ K++GS Y Sbjct: 305 --AHLFE--------------ELEQKKLLKEEDKVLLIELDNLPPGLVKKTNGSNLYLTR 348 Query: 337 DLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395 DL FK +Y N++YV+G++ Y K+L + + +I + LV + DG Sbjct: 349 DLTTFKYRYNTFNCQNILYVVGNEQKLYFKQLAQIIEKMGYCDTKIKHINFGLVLM--DG 406 Query: 396 MPIKMSKRAGDFITLRHVVDE-------------------------VGSDSVRFMMLWRK 430 K+S R F TL V+++ + ++ F L K Sbjct: 407 K--KISTRNHKFTTLIEVINQATILAKKIIEEKNPHLSDINQNARKIAVGAIIFNDL--K 462 Query: 431 NSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489 N LD DF + Q K Y+QY AR S+ ++ K LD L + + + Sbjct: 463 NDRHLDIDFNLETILQFKGQTGPYLQYTAARLNSLLKKEK-----LDISLIDKTIYQKGH 517 Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549 F ++L L +P +++ A P LA Y + + +S + + Sbjct: 518 YFILAKL-----LDYFPLILQKAQKDNMPSILARYTLKITQNVNFLYSQEK-------IL 565 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 +++ T L L+ AV + L I+GV Sbjct: 566 TDDKTTTNTNLLLIQAVFITLKESLRILGV 595 >gi|73544389|ref|XP_848089.1| arginyl-tRNA synthetase [Leishmania major strain Friedlin] gi|321438443|emb|CBZ12199.1| putative arginyl-tRNA synthetase [Leishmania major strain Friedlin] Length = 692 Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 65/127 (51%), Gaps = 3/127 (2%) Query: 55 RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR 114 +P+ + P + E + + + +D KGFIN+ + +L +++ ++ GI R Sbjct: 61 QPIKMSPQMVGEELKKNLVDNDIIDEFEPTSKGFINVSIRKEWLARMVKEVLKQGI---R 117 Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 + K +V ++F + N MHVGH R ++G++++ L+ F ++V R +I D G Sbjct: 118 PPVVKKQRVLVDFSAPNIAKEMHVGHLRSTIIGESISRLLEFCQHDVARINHIGDWGTAF 177 Query: 175 NTLALSV 181 L L + Sbjct: 178 GMLVLYI 184 >gi|296242193|ref|YP_003649680.1| arginine--tRNa ligase [Thermosphaera aggregans DSM 11486] gi|296094777|gb|ADG90728.1| Arginine--tRNA ligase [Thermosphaera aggregans DSM 11486] Length = 750 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 5/99 (5%) Query: 88 FINLYLS-----PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 F+N YL+ S + +L + G + + G G + +E SANP P+H+G R Sbjct: 93 FVNGYLNVTIDYSSIISNLLKEFLEDGFKKTLSSYGGGRTIVVEHTSANPVHPLHIGSGR 152 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 +++GDT + L G+ V +Y+ND G Q+ LA V Sbjct: 153 NSIIGDTFSKLSKKLGFNVVTRFYVNDLGRQVAVLAYGV 191 >gi|212550359|ref|YP_002308676.1| arginyl-tRNA synthetase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212548597|dbj|BAG83265.1| arginyl-tRNA synthetase [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 592 Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 113/574 (19%), Positives = 223/574 (38%), Gaps = 128/574 (22%) Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 A KGF+NL LS +Y L++I + YG + + + IE+ S N P+H+GH R Sbjct: 75 AIKGFLNLTLSSTYWINSLNTIHRTK-NYGMKKITNNSPLIMIEYSSPNTNKPLHLGHIR 133 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW-RYQQALYNNDSDLPEGYY 201 ++G +++ ++ +G ++ + +ND G I L+ W ++ N S + Sbjct: 134 NILLGYSISEILKATGNQIVKTNIVNDRGIHICKSMLA--WKKWGNGETPNSSGKKGDHL 191 Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 G Y +E Y E+L P + M + R+ L+ Sbjct: 192 IGEYYVKFNQE----YKKEILTMEASGLTPKEAEEKSLLMFE-AREMLRK---------- 236 Query: 262 EDDFHRGDPSPIR--DIIDNLARQGY--VYE--GILPPPKSKTTQKCDMDRKQLL----- 310 + GDP I I +N G+ Y+ G+ +Q +K++L Sbjct: 237 ---WETGDPETIHLWKITNNWVHIGFKETYKTLGVDFDKIYYESQTYLEGKKKILEGFEK 293 Query: 311 --------------FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355 S +G+ + LL+SDG+ Y D+ K +++ + MIY+ Sbjct: 294 GIFYKKEDGSIWANLASNGLGEKL---LLRSDGTSVYITQDIGTAKLRFDDYSINKMIYI 350 Query: 356 MGSDHSGYVKR----LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI--- 408 G++ + + + L+ + S+ + + EL +G KM R G + Sbjct: 351 AGNEQNYHFQALSLLLDKLGFEFSKNLIHFSYGMVEL----PEG---KMKSREGTVVDAD 403 Query: 409 --------TLRHVVDEVGS------------------DSVRFMMLW---RKN-----SEL 434 T + + +++G ++++ +L RKN E Sbjct: 404 DLIEEMIQTAKEISNKLGKLGKCTDKETNEVYKIISMGALKYFILKVDPRKNMTFNPKES 463 Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK---DIFPDLDFDLFPRNVIPQESEF 491 +DF+ N ++QY YAR +SI +++ + ++F Sbjct: 464 IDFN---------GNTGPFIQYTYARIKSILKKSNIKIQCIKSISTNIF----------L 504 Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551 + E +I L+++P +++ A +P +A Y + +A ++ + + ++ Sbjct: 505 NEKEKNIIQLLSDFPTIVQEAADNFDPSIIANYTFCIAKEYNQFYHN------YSILKEE 558 Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N + RL L + + II ++G+ P M Sbjct: 559 NEDIQKFRLILSYNTSKIIKMSFKLLGINVPERM 592 >gi|329936047|ref|ZP_08285847.1| arginyl-tRNA synthetase [Streptomyces griseoaurantiacus M045] gi|329304525|gb|EGG48403.1| arginyl-tRNA synthetase [Streptomyces griseoaurantiacus M045] Length = 587 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 72/294 (24%), Positives = 122/294 (41%), Gaps = 50/294 (17%) Query: 323 PLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 PL+ KSDG Y Y A DL+ + + R + ++YV+ + S + K + A Sbjct: 313 PLIVQKSDGGYGYAATDLSAIRDRVFRLKANTLLYVVDARQSLHFKMVFETARRAGWLGE 372 Query: 380 QINV-LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 + L L DG P K RAG+ + L ++DE Sbjct: 373 DVTAHQLAFGTVLGADGKPFKT--RAGETVRLVDLLDEAVDRAAAVVREKAQDLSEAEIA 430 Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VG +V++ L + FD ++ + + V Y+QYAYAR +SI R+A D+ Sbjct: 431 ERGAQVGIGAVKYADLSTSANRDYKFDLDQMVSLNGDTSV-YLQYAYARIQSILRKAGDV 489 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 P E E +E L +H+ + + +A P+KL YLY LAS+ Sbjct: 490 AP----------AAHPELELAPAERALGLHVDAFAEAVADAAAEYAPHKLTAYLYQLASL 539 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + ++A + RL L A ++ G+ ++G+ +P + Sbjct: 540 YTTFYD------KCPVLKAESPAQVENRLLLCDVTARTLHRGMALLGIRTPERL 587 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 68/135 (50%), Gaps = 7/135 (5%) Query: 47 TNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIV 106 N + L++ +P +A +V+ + + V ++G GF+N+ ++ + + L++ Sbjct: 43 ANGILALAKKEKANPRELATQVVSHVVTGEVIADVEVSGPGFLNVTVADGAIVRNLAARA 102 Query: 107 VSGIEYGRNLIGK----GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 GR + + GT V +++ N MHVGH R AV+GD++ L+ F+G V Sbjct: 103 AD--PEGRLGVPRAERPGTTV-VDYAQPNVAKEMHVGHLRSAVIGDSVVQLLEFTGESVV 159 Query: 163 REYYINDAGAQINTL 177 R ++I D G Q L Sbjct: 160 RRHHIGDWGTQFGML 174 >gi|299142422|ref|ZP_07035554.1| arginine--tRNA ligase [Prevotella oris C735] gi|298576144|gb|EFI48018.1| arginine--tRNA ligase [Prevotella oris C735] Length = 605 Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 72/297 (24%), Positives = 125/297 (42%), Gaps = 56/297 (18%) Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 LL+SDG+ Y D+ +++ D MIYV+G++ + + + L + + K + Sbjct: 330 LLRSDGTSVYMTQDIGTADMRFKDFPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKEL 389 Query: 383 VLLC-ELVRL------YRDGMPI--------------KMSKRAGDFITL-----RHVVDE 416 V +V L R+G + K S G F + ++V Sbjct: 390 VHFSYGMVELPNGKMKSREGTVVDADDLIAAMIDDARKTSDELGKFKDMTEEEKQNVARI 449 Query: 417 VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG ++++ +L RKN E +DF+ N ++QY YAR RSI R+A Sbjct: 450 VGLGALKYFILKVDARKNMLFNPEESIDFN---------GNTGPFIQYTYARIRSILRKA 500 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 K ++ + ++ + E+QLI L E+ +E A P +A Y Y+L Sbjct: 501 K------AENIAIPTTLSTDAPLNEKEIQLIQKLNEFGAAVEQAGKDYSPSGIANYCYEL 554 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ + + A+ + RL L VA +I +G+ ++G+E P M Sbjct: 555 TKDFNQFYHD------YSILNADTEIEKITRLMLAKNVAKVIKNGMELLGIEVPERM 605 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 48/95 (50%) Query: 80 SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139 + F KGF+NL ++ +L+ I + +I V IE+ S N P+H+G Sbjct: 75 AAFNVVKGFLNLTVAKEAWIGLLNDINADEKFGEKKVIDNSPLVMIEYSSPNTNKPLHLG 134 Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 H R ++G +LA +M +G +V + +ND G I Sbjct: 135 HVRNNLLGWSLAQIMEANGNKVVKTNIVNDRGIHI 169 >gi|162447348|ref|YP_001620480.1| arginyl-tRNA synthetase [Acholeplasma laidlawii PG-8A] gi|161985455|gb|ABX81104.1| arginyl-tRNA synthetase, class 1c [Acholeplasma laidlawii PG-8A] Length = 559 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 120/542 (22%), Positives = 211/542 (38%), Gaps = 92/542 (16%) Query: 81 VFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139 VF AG F+N+YL + K IL+SI +G T V I++ S N VG Sbjct: 73 VFTAG--FLNIYLKRVDVSKSILNSIHDEKQSFGTQPNNNKTIV-IDYSSPNIAKSFSVG 129 Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNNDSDLPE 198 H R V+G++L + GY V ++ D G Q ++ ++ W + + N D + Sbjct: 130 HLRSTVIGNSLKLIYQKLGYNVVGINHLGDWGTQFGSMMVAYRMWGDKDKIKANPIDELQ 189 Query: 199 GYYPGVYLKHVGKE-LADKYSSELLNF----PE-EKWLPIVKDYSVQAMMKIIRDDLKAL 252 Y + E L K L PE K ++ S+Q M + L Sbjct: 190 ALYVRFHEAAEKDESLKQKARDAFLKLEQGDPEYTKLWTYFREVSLQEFMTM----YDIL 245 Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312 ++ D + E ++ ++++ D + +L + K + D +L + Sbjct: 246 DVSFDSYNGEAFYNDKMDRVVKELED---------KHLLVEDQGAMVVKLEDDTPPVLIK 296 Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA 371 +SDG+ Y DLA + + FD +YV+G++ + + L+ V Sbjct: 297 -------------RSDGATLYTTRDLAALLYRNDTYHFDKALYVVGNEQKLHFENLKKVV 343 Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE--------------- 416 + N+ + +DG KMS R G L +V+++ Sbjct: 344 KMMG---YDFNIEHINFGLVLQDGK--KMSTRKGKTTKLDYVLNQAVLKAKQAIEEKNPN 398 Query: 417 ----------VGSDSVRFMMLWRKNSELLDFDF---CKVKEQSKENPVFYVQYAYARCRS 463 VG +V F L KN L+ +F +K + + P Y+ Y+ R S Sbjct: 399 LENKDQVAKVVGIGAVIFNDL--KNDRTLNIEFDLDGMLKFEGQTGP--YLLYSIVRIFS 454 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 I + +D+ L+ D LI L ++P V++ A + P +A Sbjct: 455 ILKSNTIDITQVDYTLYQ----------DEIYYSLIKVLDQFPSVVQRAAESYSPSTVAK 504 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 YL L+ F+ ++ + N V+ N L LV ++ +I+ GL ++G++ Sbjct: 505 YLLQLSQEFNTFYAKVKINDSNDVVRQTN-------LLLVESILNILIEGLRLLGMKHLE 557 Query: 584 EM 585 M Sbjct: 558 AM 559 >gi|39938941|ref|NP_950707.1| arginyl-tRNA synthetase [Onion yellows phytoplasma OY-M] gi|39722050|dbj|BAD04540.1| arginyl-tRNA synthetase [Onion yellows phytoplasma OY-M] Length = 557 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 120/535 (22%), Positives = 216/535 (40%), Gaps = 100/535 (18%) Query: 87 GFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 GF+N+ L + L +IL I YG N + + I++ S N VGH R V Sbjct: 75 GFLNIKLKRASLAYEILLKINELQANYG-NFPNQNQIIVIDYSSPNIAKNFSVGHLRSTV 133 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF-WRYQQALYNNDSDLPEGYYPGV 204 +G+ L ++ G+EV ++ D G Q + ++ W ++ + + + + Y V Sbjct: 134 IGNALKNIYQKLGFEVVGINHLGDWGTQFGKMIVAYQKWGNKEKILKDPINELQKLY--V 191 Query: 205 YLKHVGK---ELADKYSSELLNFPE--EKWLPIVK---DYSVQAMMKIIRDDLKALNIQH 256 + K EL ++ + L + +K+L + K + S+Q KI L I Sbjct: 192 FFHQQAKTNPELNEQANFAFLQLEQQNQKYLDLWKWFREVSLQEFCKI----YDILGISF 247 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D F+ E F+ +P+ + ++++K+LL V Sbjct: 248 DFFLGE-SFYNDKIAPLFE---------------------------ELEQKKLLKEEDQV 279 Query: 317 ----GDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV 370 D++ L+ K++GS Y DL FK ++ N++YV+G++ Y K+L + Sbjct: 280 LLIELDNLPPGLVKKTNGSTLYLTRDLTTFKYRFNTFNCQNVLYVVGNEQKLYFKQLAQI 339 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------- 416 + +I + LV + DG K+S R F TL V+++ Sbjct: 340 IEKMGYCDTKIKHINFGLVLM--DGK--KISTRHHKFTTLIEVINQATILAQKIIEEKNP 395 Query: 417 -----------VGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSI 464 + ++ F L KN LD DF + Q K Y+QY AR S+ Sbjct: 396 HLSNLNQTARKIAVGAIIFNDL--KNDRHLDIDFNLETILQFKGQTGPYLQYTAARLNSL 453 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 + K LD +L + + ++ F +L L ++P +++ A P LA Y Sbjct: 454 LNKEK-----LDTNLIDKTIYQKDHYFILVKL-----LDQFPLILQKAQKDNMPSILARY 503 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 + + + +S + + +++ T L L+ AV + L I+GV Sbjct: 504 MLKITQNVNFLYSQEK-------ILTDDKTTTNTNLLLIQAVFITLKESLRILGV 551 >gi|19112869|ref|NP_596077.1| mitochondrial and cytoplasmic arginine-tRNA ligase Rrs1/Mrs1 (predicted) [Schizosaccharomyces pombe 972h-] gi|23822212|sp|O74781|SYRC_SCHPO RecName: Full=Probable arginyl-tRNA synthetase, cytoplasmic; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|3738212|emb|CAA21267.1| mitochondrial and cytoplasmic arginine-tRNA ligase Rrs1/Mrs1 (predicted) [Schizosaccharomyces pombe] Length = 618 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/87 (39%), Positives = 42/87 (48%) Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 PS + IL I YGRN G G IEF S N P H GH R ++G LA+L Sbjct: 114 GPSLTKLILPIIWEQRENYGRNESGSGKVAVIEFSSPNIAKPFHAGHLRSTIIGSFLANL 173 Query: 154 MAFSGYEVTREYYINDAGAQINTLALS 180 G++V R Y+ D G Q LA+ Sbjct: 174 HESQGWKVHRVNYLGDWGKQFGLLAIG 200 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 66/281 (23%), Positives = 118/281 (41%), Gaps = 47/281 (16%) Query: 326 KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRL----EAVAAAVSEKKAQ 380 K DG+ Y D+ +YE+ FD IYV+ S Y +L E + ++K Sbjct: 352 KRDGTTLYLTRDIGTAYKRYEKYKFDKSIYVVSSQQDMYFSQLFKIFELMGFDWAKKCVH 411 Query: 381 IN--------------VLLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVR 423 IN V L +++ + ++ M M K + + + V D VG ++R Sbjct: 412 INYGLVQGMSTRKGKAVFLDDIMEVAKEEMHKVMQKNEEKYAQVENPEEVADIVGKTAIR 471 Query: 424 FMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 K FD+ ++ + P Y+QYA++R S+ R + D + Sbjct: 472 IQDSTGKRINNYAFDWSRMTSFEGDTGP--YLQYAHSRLSSVRRNVN--YTDEEIMGANL 527 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL----ASVFHGHWSH 538 ++ + +D L+ L +YP V++NA QE + YL+ L + ++ W Sbjct: 528 ELLTEPDAYD-----LVRLLGQYPDVLKNAFRFQETSTVVTYLFKLTHAVSKLYDILWVR 582 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 GRE R + + RL L A ++N+G+ ++G+ Sbjct: 583 GRE-----------RDIQLARLALFGAAKQVLNNGMTLLGL 612 >gi|271970123|ref|YP_003344319.1| arginine--tRNA ligase [Streptosporangium roseum DSM 43021] gi|270513298|gb|ACZ91576.1| Arginine--tRNA ligase [Streptosporangium roseum DSM 43021] Length = 584 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 79/296 (26%), Positives = 125/296 (42%), Gaps = 48/296 (16%) Query: 321 DRPL----LKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAA-- 373 D+PL KSDG Y Y D+A + + D ++YV+G+ + ++ L A A Sbjct: 306 DQPLPFMIRKSDGGYGYATTDMATIHYRVQDLKVDRILYVIGATQALHMSMLFASARMAG 365 Query: 374 -----VSEKKAQINVLLCELVRLY--RDGMPIKM-------SKRAGDFITLRHVVDE--- 416 V + QI +L +++ R G IK+ RA + R D Sbjct: 366 WLPDHVRAEHVQIGSVLGSDGKMFKTRSGESIKLLDLLDEAETRAAAVLAGRDYDDAARA 425 Query: 417 -----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VG +V++ L + FDF ++ + N Y+QYA AR RSIFR+A Sbjct: 426 EIGHAVGMGAVKYADLSVSHDSEYVFDFDRMLALTG-NTGPYLQYATARIRSIFRKA--- 481 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 D+ P +E L + + + +++ P+KLA YL++ ASV Sbjct: 482 ------DVAPATATGPILLGHPAERALALQVLGFGSIVDEVAEGSMPHKLAAYLFETASV 535 Query: 532 FHGHWSHGREN-PRLR-FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + EN P L+ V R RL L ++ +GL+++GV P M Sbjct: 536 FTTFY----ENCPVLKDDVDPATRA---SRLALCALTLRVLETGLDLLGVPVPERM 584 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 14/140 (10%) Query: 48 NAAMILSRPLGLDPLTIAELIVARI-------KIDPDVDSVFIAGKGFINLYLSPSYLRK 100 N AM LS+ L P +A+ I + + D +V ++G GF+N+ LS ++ + Sbjct: 42 NVAMSLSKRLRRAPREVAQEIADHLSGRAEGTQGDAFPGTVEVSGPGFLNITLSDDWIAE 101 Query: 101 ILSSIVVSGIEYGRNLIGKGT---KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 + ++ R+ + + T V I++ + N MHVGH R +VGD LA + Sbjct: 102 QTAEVMADP----RSGVAQATPPQTVVIDYSAPNAAKEMHVGHLRTTIVGDALARVHEHL 157 Query: 158 GYEVTREYYINDAGAQINTL 177 G +V R+ ++ D G L Sbjct: 158 GNKVIRQNHLGDWGTPFGML 177 >gi|298374553|ref|ZP_06984511.1| arginine--tRNA ligase [Bacteroides sp. 3_1_19] gi|298268921|gb|EFI10576.1| arginine--tRNA ligase [Bacteroides sp. 3_1_19] Length = 597 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 72/305 (23%), Positives = 127/305 (41%), Gaps = 66/305 (21%) Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS------------------ 361 ++ LL++DG+ Y D+ K +++ + MIYV+G++ + Sbjct: 319 EKLLLRADGTSVYMTQDIGTAKLRFDDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEFG 378 Query: 362 --------GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL--- 410 G V+ E + + L+ E++ R+ +S+ G + Sbjct: 379 KGLVHFSYGMVELPEGKMKSREGTVVDADDLMAEMISTARE-----ISQELGKLNEMTPE 433 Query: 411 --RHVVDEVGSDSVRFMMLW---RKN-----SELLDFDFCKVKEQSKENPVFYVQYAYAR 460 ++ VG S+++ +L RKN E +DF+ N ++QY YAR Sbjct: 434 EAENIARIVGLGSLKYFILKVDPRKNMTFNPKESIDFN---------GNTGPFIQYTYAR 484 Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520 RS+ R+A + L L P E LI +A+Y +++ A P Sbjct: 485 IRSVLRKAAEQGITLPEQL------PLTFAISEKEENLIQMIADYAEIVKEAGKLYSPAC 538 Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 +A Y+YDL ++ + + P LR N +L RL L VA I+ SG++++G+E Sbjct: 539 VANYIYDLVKEYNQFY---HDFPILR---EENPELKNFRLVLSANVAKIVKSGMDLLGIE 592 Query: 581 SPNEM 585 P M Sbjct: 593 VPERM 597 Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 2/90 (2%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCA 144 KGF+NL ++ S +L+SI YG + + + V IE+ S N P+H+GH R Sbjct: 81 KGFLNLTVACSCWIDLLNSINEQPA-YGIIPVTEQSPLVMIEYSSPNTNKPLHLGHVRNN 139 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQI 174 ++G +L+ +M +G ++ + +ND G I Sbjct: 140 LLGYSLSKIMKANGNQIVKTNIVNDRGIHI 169 >gi|322492952|emb|CBZ28234.1| putative arginyl-tRNA synthetase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 692 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 67/128 (52%), Gaps = 5/128 (3%) Query: 55 RPLGLDPLTIAELIVARIKIDPDVDSVF-IAGKGFINLYLSPSYLRKILSSIVVSGIEYG 113 +P+ + P + E + + +D D+ VF KGFIN+ + ++ ++ ++ GI Sbjct: 61 QPIKMSPQMVGEELKKNL-VDNDIIDVFEPTSKGFINVSIRKEWVTSMVKEVLKQGI--- 116 Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173 R + K +V ++F + N MHVGH R ++G++++ L+ F ++V R +I D G Sbjct: 117 RPPVVKKQRVLVDFSAPNIAKEMHVGHLRSTIIGESISRLLEFCQHDVARINHIGDWGTA 176 Query: 174 INTLALSV 181 L L + Sbjct: 177 FGMLILYI 184 >gi|121716278|ref|XP_001275748.1| arginyl-tRNA synthetase [Aspergillus clavatus NRRL 1] gi|119403905|gb|EAW14322.1| arginyl-tRNA synthetase [Aspergillus clavatus NRRL 1] Length = 733 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 125/536 (23%), Positives = 209/536 (38%), Gaps = 113/536 (21%) Query: 119 KGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 KG K + +EF S N P H GH R ++G LA+L G++V + Y+ D G Q L Sbjct: 152 KGKKRIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNYLGDWGKQYGLL 211 Query: 178 A--LSVFWRYQQALYNNDSDLPEGYYPGVYLK---HVG------KEL-----ADKYSSEL 221 A +F ++ L N P + VY+K VG KEL A K SE Sbjct: 212 ANGFKLFGNEEELLKN-----PINHLFDVYVKINQIVGQQEGPIKELKEQIKAKKEKSED 266 Query: 222 LNFPEEKWLPIVK-----------------DYSVQAMMKIIRD--------DLKALNIQH 256 ++ E + +V D A+ + RD LNI Sbjct: 267 VSELEAELAKLVDVSEDEKARRYFKSMEDGDQDALALWRRFRDLSIEKYKQTYARLNIDF 326 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ E S I++ A Q G+ KS+ D + + + Sbjct: 327 DVYSGE--------SQIKNESMTAAYQSMEKAGV--SEKSEGAVIVDFTKHG----AKKL 372 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA--- 372 G + +++ DG+ Y D+ + E FD MIYV+ + ++ +L + Sbjct: 373 GKAI---IVRKDGTPLYLTRDIGAIMERDEAYHFDKMIYVVAAQQDLHLAQLFKITELMG 429 Query: 373 -----------------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH--- 412 +S +K + L +++R D M M K + + + Sbjct: 430 HKDLASRCQHINFGMVRGMSTRKGTVK-FLDDILRDVADKMHEVMKKNQEKYDQVENPEA 488 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDI 471 V D +G SV + K DF+ + + P Y+QYA+AR S+ R++ Sbjct: 489 VADILGLTSVMVQDMTGKRINGYDFNLEAMTSFEGDTGP--YLQYAHARLCSMGRKSGLS 546 Query: 472 FPDLD---FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 +LD DL +T LI LA +P V+ N T EP + YL+ + Sbjct: 547 VEELDSANLDLLT----------ETHATDLIRLLATWPDVLLNTTKTLEPTTIINYLFRM 596 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 + S G ++ + V + ++ R+ L A ++++G+ ++G+ SP E Sbjct: 597 THIL----SSGYDSLK---VVGSEPEVKKARMALYAAARQVLHNGMRVLGL-SPVE 644 >gi|150010178|ref|YP_001304921.1| arginyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503] gi|166232818|sp|A6LHY5|SYR_PARD8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|149938602|gb|ABR45299.1| putative arginyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503] Length = 597 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 68/308 (22%), Positives = 127/308 (41%), Gaps = 72/308 (23%) Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS------------------ 361 ++ LL++DG+ Y D+ K +++ + MIYV+G++ + Sbjct: 319 EKLLLRADGTSVYMTQDIGTAKLRFDDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEFG 378 Query: 362 --------GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL--- 410 G V+ E + + L+ E++ R+ +S+ G + Sbjct: 379 KGLVHFSYGMVELPEGKMKSREGTVVDADDLMAEMISTARE-----ISQELGKLDEMTPE 433 Query: 411 --RHVVDEVGSDSVRFMMLW---RKN-----SELLDFDFCKVKEQSKENPVFYVQYAYAR 460 ++ VG S+++ +L RKN E +DF+ N ++QY YAR Sbjct: 434 EAENIARIVGLGSLKYFILKVDPRKNMTFNPKESIDFN---------GNTGPFIQYTYAR 484 Query: 461 CRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 RS+ R+A + + P+ +P E LI +A+Y +++ A Sbjct: 485 IRSVLRKAAEQGIVLPEQ---------LPLTFAISEKEENLIQMIADYAEIVKEAGKLYS 535 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 P +A Y+YDL ++ + ++ N +L RL L VA I+ SG++++ Sbjct: 536 PACVANYIYDLVKEYNQFYHD------FSILREENPELKNFRLVLSANVAKIVKSGMDLL 589 Query: 578 GVESPNEM 585 G+E P M Sbjct: 590 GIEVPERM 597 Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 2/90 (2%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCA 144 KGF+NL ++ S +L+SI YG + + + V IE+ S N P+H+GH R Sbjct: 81 KGFLNLTVACSCWIDLLNSINEQPA-YGIIPVTEQSPLVMIEYSSPNTNKPLHLGHVRNN 139 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQI 174 ++G +L+ ++ +G ++ + +ND G I Sbjct: 140 LLGYSLSKIIKANGNQIVKTNIVNDRGIHI 169 >gi|256839001|ref|ZP_05544511.1| LOW QUALITY PROTEIN: arginyl-tRNA synthetase [Parabacteroides sp. D13] gi|256739920|gb|EEU53244.1| LOW QUALITY PROTEIN: arginyl-tRNA synthetase [Parabacteroides sp. D13] Length = 571 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 68/308 (22%), Positives = 127/308 (41%), Gaps = 72/308 (23%) Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS------------------ 361 ++ LL++DG+ Y D+ K +++ + MIYV+G++ + Sbjct: 293 EKLLLRADGTSVYMTQDIGTAKLRFDDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEFG 352 Query: 362 --------GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL--- 410 G V+ E + + L+ E++ R+ +S+ G + Sbjct: 353 KGLVHFSYGMVELPEGKMKSREGTVVDADDLMAEMISTARE-----ISQELGKLDEMTPE 407 Query: 411 --RHVVDEVGSDSVRFMMLW---RKN-----SELLDFDFCKVKEQSKENPVFYVQYAYAR 460 ++ VG S+++ +L RKN E +DF+ N ++QY YAR Sbjct: 408 EAENIARIVGLGSLKYFILKVDPRKNMTFNPKESIDFN---------GNTGPFIQYTYAR 458 Query: 461 CRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 RS+ R+A + + P+ +P E LI +A+Y +++ A Sbjct: 459 IRSVLRKAAEQGIVLPE---------QLPLTFAISEKEENLIQMIADYAEIVKEAGKLYS 509 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 P +A Y+YDL ++ + ++ N +L RL L VA I+ SG++++ Sbjct: 510 PACVANYIYDLVKEYNQFYHD------FSILREENPELKNFRLVLSANVAKIVKSGMDLL 563 Query: 578 GVESPNEM 585 G+E P M Sbjct: 564 GIEVPERM 571 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 47/89 (52%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 KGF+NL ++ S +L+SI + + V IE+ S N P+H+GH R + Sbjct: 55 KGFLNLTVACSCWIDLLNSINKQPAYGIIPVTEQSPLVMIEYSSPNTNKPLHLGHVRNNL 114 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQI 174 +G +L+ +M +G ++ + +ND G I Sbjct: 115 LGYSLSKIMKANGNQIVKTNIVNDRGIHI 143 >gi|213615487|ref|ZP_03371313.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 433 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 75/305 (24%), Positives = 121/305 (39%), Gaps = 60/305 (19%) Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGY-------VKRLE 368 GD + + K DG Y Y D+A K +YE D ++Y + S + V++ Sbjct: 153 GDPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWTIVRKAG 212 Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416 V +V + ++L +DG P K R G + L ++DE Sbjct: 213 YVPDSVPLEHHMFGMMLG------KDGKPFKT--RTGGTVKLADLLDEALERARRLVAEK 264 Query: 417 ---------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461 VG +V++ L + + FD+ + + N Y+QYAY R Sbjct: 265 NPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRV 323 Query: 462 RSIFRQAKDIFPDLDFD-LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520 S+FR+A D+D L VI E E QL L ++ + P+ Sbjct: 324 LSVFRKA-----DIDEQALASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHV 374 Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + YLYD+A +F G + H + A N + RL+L A + GL+ +G+E Sbjct: 375 MCAYLYDVAGLFSGFYEH------CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIE 428 Query: 581 SPNEM 585 + M Sbjct: 429 TVERM 433 >gi|327261527|ref|XP_003215581.1| PREDICTED: probable arginyl-tRNA synthetase, mitochondrial-like [Anolis carolinensis] Length = 579 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 122/559 (21%), Positives = 219/559 (39%), Gaps = 84/559 (15%) Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYG--RNLIGKGT 121 A+ + ++K D V + G G +N ++ L K +L + G +YG L Sbjct: 67 AQNMAKKLKCDGVVSRIG-TGDGTVNFTINRELLAKTVLQQVFDDGPQYGLKSELFSDLP 125 Query: 122 KVNI--EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 K NI EF S N HVGH R ++G+ +A+L G+ V R Y+ D G Q L Sbjct: 126 KRNIIIEFSSPNIAKKFHVGHLRSTIIGNFVANLKEACGHYVKRINYLGDWGMQFGLLGA 185 Query: 180 SVFWRY--QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---LNFPEEKWLPIVK 234 F R+ ++ L +N Y V +E K + + L EE+ + + + Sbjct: 186 G-FQRFGSEEKLRSNPLQHLFEVYVQVNKASEEEENTKKQAQDFFRKLEMREEQAVSLWQ 244 Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294 + ++ + I+ K L + D + E D+ ++ ++D +G+L Sbjct: 245 HFRNVSIEEYIQ-MYKRLGVCFDEYSGESDYQEKSQKVLK-MLDT--------KGLLKKT 294 Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMI 353 K T + + GD +++SDG+ Y DLA + ++ D MI Sbjct: 295 KEGTG----------VVHLSENGDQ-SVVIMRSDGTSLYLTRDLAAAIDRMDKYNPDTMI 343 Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 YV + + +++ + + + + C+ + G M R G+ + L V Sbjct: 344 YVTDKNQVPHFQQVFQILRLLGYEWTE----RCQHLPF---GRVQGMKTRKGEVVFLEDV 396 Query: 414 VDEVGSDSVRFMMLWRKNSEL-------------------------LDFDFCKVKE-QSK 447 +DE S + L + EL D+ F + QS+ Sbjct: 397 LDEARSMVLERSALAKTTKELDNPLETAENIGLAALIIQDFKGLLSSDYQFSWDRVLQSR 456 Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 + ++QY +AR S+ D+ + + I D + LI HL Y Sbjct: 457 GDTGVFLQYTHARLWSL--------EDMCGTVNQVSHINMACLQDPPAVSLIQHLLRYDE 508 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF-VQANNRKLTMMRLQLVHAV 566 ++ ++ +P + YL L SH R V+ + +L RL L AV Sbjct: 509 ILYQSSKDLQPKHIVNYLLKL--------SHLTAVAHKRLPVKGSVPELAESRLCLFQAV 560 Query: 567 ASIINSGLNIIGVESPNEM 585 +++ SG+ ++G+ N+M Sbjct: 561 RTVLGSGMKLLGITPVNKM 579 >gi|154491896|ref|ZP_02031522.1| hypothetical protein PARMER_01523 [Parabacteroides merdae ATCC 43184] gi|154088137|gb|EDN87182.1| hypothetical protein PARMER_01523 [Parabacteroides merdae ATCC 43184] Length = 597 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 71/306 (23%), Positives = 128/306 (41%), Gaps = 68/306 (22%) Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 ++ LL++DG+ Y D+ K +++ + MIYV+G++ + + + L + + + Sbjct: 319 EKLLLRADGTSVYMTQDIGTAKLRFDDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEFG 378 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFI-----------TLRHV------VDE------ 416 + V + +G KM R G + T R + VDE Sbjct: 379 KGLVHFSYGMVELPEG---KMKSREGTVVDADDLMEEMVGTAREISQELGKVDEMTPEEA 435 Query: 417 ------VGSDSVRFMMLW---RKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCR 462 VG S+++ +L RKN E +DF+ N ++QY YAR R Sbjct: 436 ENIARMVGLGSLKYFILKVDPRKNMTFNPKESIDFN---------GNTGPFIQYTYARIR 486 Query: 463 SIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 S+ R+A + + P+ +P + E LI+ +A+Y V+ A P Sbjct: 487 SVLRKAAEQGIVLPEQ---------LPTTTTISEKEENLILMIADYASVVREAGKEYSPA 537 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 +A Y YDL ++ + ++ N ++ RL L VA I+ S ++++G+ Sbjct: 538 LIANYTYDLVKEYNQFYHD------FSILREENEEVKEFRLVLSANVAKIVKSAMSLLGI 591 Query: 580 ESPNEM 585 E P M Sbjct: 592 EVPERM 597 Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 71/146 (48%), Gaps = 3/146 (2%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 +++ +++ + GHL+ L T E+ ++ +P V + F KGF+ Sbjct: 26 NQVQLQKTKKEFKGHLTLVVFPFLRMSKKSPEQTAQEIGEYLLRHEPAV-AEFNVIKGFL 84 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGD 148 NL ++ + +L+ I YG + + + V IE+ S N P+H+GH R ++G Sbjct: 85 NLTIACACWIDLLNEIN-GQPSYGIIPVTEQSPLVMIEYSSPNTNKPLHLGHVRNNLLGY 143 Query: 149 TLASLMAFSGYEVTREYYINDAGAQI 174 +L+ +M +G +V + +ND G I Sbjct: 144 SLSEIMKANGNKVVKTNIVNDRGIHI 169 >gi|255012560|ref|ZP_05284686.1| arginyl-tRNA synthetase [Bacteroides sp. 2_1_7] Length = 597 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 68/308 (22%), Positives = 127/308 (41%), Gaps = 72/308 (23%) Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS------------------ 361 ++ LL++DG+ Y D+ K +++ + MIYV+G++ + Sbjct: 319 EKLLLRADGTSVYMTQDIGTAKLRFDDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEFG 378 Query: 362 --------GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL--- 410 G V+ E + + L+ E++ R+ +S+ G + Sbjct: 379 KGLVHFSYGMVELPEGKMKSREGTVVDADDLMAEMISTARE-----ISQELGKLDEMTPE 433 Query: 411 --RHVVDEVGSDSVRFMMLW---RKN-----SELLDFDFCKVKEQSKENPVFYVQYAYAR 460 ++ VG S+++ +L RKN E +DF+ N ++QY YAR Sbjct: 434 EAENIARIVGLGSLKYFILKVDPRKNMTFNPKESIDFN---------GNTGPFIQYTYAR 484 Query: 461 CRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 RS+ R+A + + P+ +P E LI +A+Y +++ A Sbjct: 485 IRSVLRKAAEQGIVLPE---------QLPLTFAISEKEENLIQMIADYAEIVKEAGKLYS 535 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 P +A Y+YDL ++ + ++ N +L RL L VA I+ SG++++ Sbjct: 536 PACVANYIYDLVKEYNQFYHD------FSILREENPELKNFRLVLSANVAKIVKSGMDLL 589 Query: 578 GVESPNEM 585 G+E P M Sbjct: 590 GIEVPERM 597 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 2/90 (2%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCA 144 KGF+NL ++ S +L+SI YG + + + V IE+ S N P+H+GH R Sbjct: 81 KGFLNLTVACSCWIDLLNSINEQPA-YGIIPVTEQSPLVMIEYSSPNTNKPLHLGHVRNN 139 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQI 174 ++G +L+ +M +G ++ + +ND G I Sbjct: 140 LLGYSLSKIMKANGNQIVKTNIVNDRGIHI 169 >gi|227827629|ref|YP_002829409.1| arginyl-tRNA synthetase [Sulfolobus islandicus M.14.25] gi|229584833|ref|YP_002843335.1| arginyl-tRNA synthetase [Sulfolobus islandicus M.16.27] gi|227459425|gb|ACP38111.1| arginyl-tRNA synthetase [Sulfolobus islandicus M.14.25] gi|228019883|gb|ACP55290.1| arginyl-tRNA synthetase [Sulfolobus islandicus M.16.27] Length = 625 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 38/66 (57%) Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG I K ++ +E SANP P+H+GH R ++GD LA + G+ V +Y+ND G Sbjct: 99 YGLEKIEKPKRIVVEHTSANPIHPLHIGHLRNTILGDALARALKARGHSVNVRFYVNDTG 158 Query: 172 AQINTL 177 Q+ L Sbjct: 159 RQVAVL 164 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/290 (21%), Positives = 131/290 (45%), Gaps = 52/290 (17%) Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 L++SDG+ Y D+AY K+ + D +I V+ + Y+ +++ A ++ Sbjct: 360 LMRSDGTTLYTVRDIAYTIFKFNQFNADFVINVIAEEQ--YIPQIQLRGALELLGYSR-- 415 Query: 383 VLLCELVRLYRDGM----PIKMSKRAGDFITLRHV---------------------VDEV 417 E + Y GM ++MS R G IT+ + +D++ Sbjct: 416 --FAENLLHYSYGMVNIQGLRMSGRLGKIITIDEIYEKLDNIVRNKLKEKGGNMENIDDI 473 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP--DL 475 + ++R+ +L ++ L FD ++ ++N Y+QY YAR +I ++ + + Sbjct: 474 ANAALRYAILSVSANKPLSFDLNRIT-SFEQNSGPYLQYTYARAANILAKSTENLSMDKV 532 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 DF S+ + +++ +A++P V +NA L +L +L+ +F+ Sbjct: 533 DF-----------SDLVGDKRNILILIAKFPEVFKNAVDNLRLEDLVAFLRELSDIFNSW 581 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + R +Q + + M+RL +V V+ ++ +GL+++G+ S M Sbjct: 582 YD------KERVLQEQDPRKRMLRLYIVKGVSVVLKNGLSVLGIRSLERM 625 >gi|322819381|gb|EFZ26522.1| arginyl-tRNA synthetase, putative [Trypanosoma cruzi] Length = 692 Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 6/133 (4%) Query: 50 AMILSR---PLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIV 106 A +LS+ P+ + P+ + E + ++ + ++ +GFIN+ + + ++S ++ Sbjct: 53 AKLLSKATPPMKMSPINVGEELRKNLEENDLIERFEPTPQGFINIAIKQEWAATMVSRLL 112 Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166 GI+ I KV ++F S N MHVGH R ++G+T+ L F G+EV R + Sbjct: 113 KMGIQPP---ILPPKKVLVDFSSPNIAKEMHVGHLRSTIIGETICRLFEFCGFEVHRVNH 169 Query: 167 INDAGAQINTLAL 179 + D G L L Sbjct: 170 VGDWGTAFGMLIL 182 >gi|256394710|ref|YP_003116274.1| arginyl-tRNA synthetase [Catenulispora acidiphila DSM 44928] gi|256360936|gb|ACU74433.1| arginyl-tRNA synthetase [Catenulispora acidiphila DSM 44928] Length = 619 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 75/301 (24%), Positives = 124/301 (41%), Gaps = 53/301 (17%) Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA---A 372 GD V + KSDG Y Y A DLA + + D ++YV+ S + + + + A Sbjct: 340 GDPVPLMVRKSDGGYGYAATDLAAVRYRVNTLKADEILYVVDSRQALHFRMVFETARRAG 399 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------- 416 + E ++V + L DG P K RAG I L ++D Sbjct: 400 YLPEGVEAVHVQFGSV--LGTDGKPFKT--RAGKTIRLIELLDSAVDHAVATVEEKNPDL 455 Query: 417 -----------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 VG +V++ L ++ FD ++ N Y+QYA+AR SI Sbjct: 456 AAADARTEAKLVGIGAVKYADLSTSRTKDYIFDLDRMVSLHG-NTSVYLQYAHARIHSIL 514 Query: 466 RQAKDIFPD-LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R+ P + DL + +E +L +HL ++ + T EP++LA Y Sbjct: 515 RKLPPGTPARIHTDLV----------LEPAERKLALHLDDFGATLATVTENFEPHRLATY 564 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 LY LA F + EN ++A + R LV + +GL ++G+ +P++ Sbjct: 565 LYALAQTFSDFY----EN--CPVLKAPTDAVRENRAALVQLTGETLKAGLALLGISAPDQ 618 Query: 585 M 585 + Sbjct: 619 L 619 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 1/100 (1%) Query: 78 VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMH 137 + +V +AG GF+NL L+ + L + + G G G I++ N MH Sbjct: 108 IAAVDVAGPGFLNLTLTDAALAAQAAE-RLGDPRLGVAPTGVGRTAVIDYSQPNIAKEMH 166 Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 VGH R V+GD L L+ F G V R+ ++ D G Q L Sbjct: 167 VGHLRSTVIGDALVRLLEFDGRTVVRQNHLGDWGTQFGML 206 >gi|317504598|ref|ZP_07962568.1| arginine--tRNA ligase [Prevotella salivae DSM 15606] gi|315664292|gb|EFV03989.1| arginine--tRNA ligase [Prevotella salivae DSM 15606] Length = 605 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 74/298 (24%), Positives = 129/298 (43%), Gaps = 58/298 (19%) Query: 324 LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 LL+SDG+ Y D+ ++ + D MIYV+G++ + + + L + + K + Sbjct: 330 LLRSDGTSVYMTQDIGTADMRFKDYPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKAL 389 Query: 383 VLLC-ELVRL------YRDGMPI--------------KMSKRAGDFITL-----RHVVDE 416 V +V L R+G + K S G F + ++V Sbjct: 390 VHFSYGMVELPNGKMKSREGTVVDADDLVAAMIDDARKTSDELGKFKDMTEEEKQNVARI 449 Query: 417 VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 VG ++++ +L RKN E +DF+ N ++QY YAR RSI R+A Sbjct: 450 VGLGALKYFILKVDARKNMLFNPEESIDFN---------GNTGPFIQYTYARIRSILRKA 500 Query: 469 K-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 + + P P + ++ + E+QLI L ++ +E A P +A Y Y+ Sbjct: 501 EAENIP------LPE-TLSTDAPLNEKEIQLIQKLNDFGAAVEQAGKDYSPSGIANYCYE 553 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L F+ + + + +N K+T RL L VA +I +G+ ++G+E P M Sbjct: 554 LTKDFNQFY----HDYSILNADSNGEKIT--RLVLAKNVAKVIKNGMELLGIEVPERM 605 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 2/96 (2%) Query: 80 SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHV 138 S F KGF+NL + +L+ I ++G + + V IE+ S N P+H+ Sbjct: 75 SSFNVVKGFLNLVVGKDAWLSLLNDINADE-KFGEKKVSDDSPLVMIEYSSPNTNKPLHL 133 Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 GH R ++G +LA +M +GY+V + +ND G I Sbjct: 134 GHVRNNLLGWSLAQIMQANGYKVVKTNIVNDRGIHI 169 >gi|229582117|ref|YP_002840516.1| arginyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51] gi|228012833|gb|ACP48594.1| arginyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51] Length = 625 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 38/66 (57%) Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG I K ++ +E SANP P+H+GH R ++GD LA + G+ V +Y+ND G Sbjct: 99 YGLEKIEKPKRIVVEHTSANPIHPLHIGHLRNTILGDALARALKARGHSVNVRFYVNDTG 158 Query: 172 AQINTL 177 Q+ L Sbjct: 159 RQVAVL 164 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/290 (21%), Positives = 131/290 (45%), Gaps = 52/290 (17%) Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 L++SDG+ Y D+AY K+ + D +I V+ + Y+ +++ A ++ Sbjct: 360 LMRSDGTTLYTVRDIAYTIFKFNQFNADFVINVIAEEQ--YIPQIQLRGALELLGYSR-- 415 Query: 383 VLLCELVRLYRDGM----PIKMSKRAGDFITLRHV---------------------VDEV 417 E + Y GM ++MS R G IT+ + +D++ Sbjct: 416 --FAENLLHYSYGMVNIQGLRMSGRLGKIITIDEIYEKLDNIVRNKLKEKGGNMENIDDI 473 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP--DL 475 + ++R+ +L ++ L FD ++ ++N Y+QY YAR +I ++ + + Sbjct: 474 ANAALRYAILSVSANKPLSFDLNRIT-SFEQNSGPYLQYTYARAANILAKSTENLSMDKV 532 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 DF S+ + +++ +A++P V +NA L +L +L+ +F+ Sbjct: 533 DF-----------SDLVGDKRNILILIAKFPEVFKNAVDNLRLEDLVAFLRELSDIFNSW 581 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + R +Q + + M+RL +V V+ ++ +GL+++G+ S M Sbjct: 582 YD------KERVLQEQDPRKRMLRLYIVKGVSVVLKNGLSVLGIRSLERM 625 >gi|238619786|ref|YP_002914612.1| arginyl-tRNA synthetase [Sulfolobus islandicus M.16.4] gi|238380856|gb|ACR41944.1| arginyl-tRNA synthetase [Sulfolobus islandicus M.16.4] gi|323474679|gb|ADX85285.1| arginyl-tRNA synthetase [Sulfolobus islandicus REY15A] gi|323477413|gb|ADX82651.1| arginyl-tRNA synthetase [Sulfolobus islandicus HVE10/4] Length = 625 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 38/66 (57%) Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG I K ++ +E SANP P+H+GH R ++GD LA + G+ V +Y+ND G Sbjct: 99 YGLEKIEKPKRIVVEHTSANPIHPLHIGHLRNTILGDALARALKARGHSVNVRFYVNDTG 158 Query: 172 AQINTL 177 Q+ L Sbjct: 159 RQVAVL 164 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/290 (21%), Positives = 131/290 (45%), Gaps = 52/290 (17%) Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 L++SDG+ Y D+AY K+ + D +I V+ + Y+ +++ A ++ Sbjct: 360 LMRSDGTTLYTVRDIAYTIFKFNQFNADFVINVIAEEQ--YIPQIQLRGALELLGYSR-- 415 Query: 383 VLLCELVRLYRDGM----PIKMSKRAGDFITLRHV---------------------VDEV 417 E + Y GM ++MS R G IT+ + +D++ Sbjct: 416 --FAENLLHYSYGMVNIQGLRMSGRLGKIITIDEIYEKLDNIVRNKLKEKGGNMENIDDI 473 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP--DL 475 + ++R+ +L ++ L FD ++ ++N Y+QY YAR +I ++ + + Sbjct: 474 ANAALRYAILSVSANKPLSFDLNRIT-SFEQNSGPYLQYTYARAANILAKSTENLSMDKV 532 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 DF S+ + +++ +A++P V +NA L +L +L+ +F+ Sbjct: 533 DF-----------SDLVGDKRNILILIAKFPEVFKNAVDNLRLEDLVAFLRELSDIFNSW 581 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + R +Q + + M+RL +V V+ ++ +GL+++G+ S M Sbjct: 582 YD------KERVLQEQDPRKRMLRLYIVKGVSVVLKNGLSVLGIRSLERM 625 >gi|188994229|ref|YP_001928481.1| arginyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277] gi|238691463|sp|B2RHN9|SYR_PORG3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|188593909|dbj|BAG32884.1| arginyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277] Length = 597 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 68/300 (22%), Positives = 119/300 (39%), Gaps = 56/300 (18%) Query: 321 DRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHS------------------ 361 ++ LL++DG+ Y D+ K ++ + + MIYV+G++ + Sbjct: 319 EKLLLRADGTSVYMTQDIGTAKMRFNDYPINRMIYVVGNEQNYHFQVLSILLDRLGFEFG 378 Query: 362 --------GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 G V+ E + + L+ E++R + D R V Sbjct: 379 KGLVHFSYGMVELPEGKMKSREGTVVDADDLMDEMIRTAAEIAAEAGKAAEKDEEESREV 438 Query: 414 VDEVGSDSVRFMMLW---RKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 VG S+++ +L RKN E +DF+ N +VQY YAR RS+ Sbjct: 439 ARIVGLGSLKYFILKVDPRKNMTFNPKESIDFN---------GNTGSFVQYTYARIRSLM 489 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 R+A+ D+ L P + E LI ++EY V+ A + P +A Y+ Sbjct: 490 RRAEAAGYDIPSQL------PTDLPLSEKEEALIQKVSEYAEVVSEAGRSYSPALIANYI 543 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 YDL ++ + ++ + ++ RL L VA + G ++G+E P M Sbjct: 544 YDLVKEYNQFYHD------FSVLKEEDERIRAFRLALSEVVALTMRKGFALLGIEMPERM 597 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 2/90 (2%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCA 144 KGF+NL ++P ++L+ I I +G + + + V +E+ S N P+H+GH R Sbjct: 81 KGFLNLTIAPRVWLELLNEIRAD-INFGHKVATEDSPLVMVEYSSPNTNKPLHLGHVRNN 139 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQI 174 ++G +L+ +M +GY V + +ND G I Sbjct: 140 LLGYSLSEIMKANGYRVVKTNIVNDRGIHI 169 >gi|15897753|ref|NP_342358.1| arginyl-tRNA synthetase [Sulfolobus solfataricus P2] gi|227830317|ref|YP_002832097.1| arginyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15] gi|229579142|ref|YP_002837540.1| arginyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14] gi|284997739|ref|YP_003419506.1| arginyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5] gi|23822202|sp|Q97ZN1|SYR_SULSO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|13814038|gb|AAK41148.1| Arginyl-tRNA synthetase (argS) [Sulfolobus solfataricus P2] gi|227456765|gb|ACP35452.1| arginyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15] gi|228009856|gb|ACP45618.1| arginyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14] gi|284445634|gb|ADB87136.1| arginyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5] Length = 625 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 38/66 (57%) Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG I K ++ +E SANP P+H+GH R ++GD LA + G+ V +Y+ND G Sbjct: 99 YGLEKIEKPKRIVVEHTSANPIHPLHIGHLRNTILGDALARALKARGHSVNVRFYVNDTG 158 Query: 172 AQINTL 177 Q+ L Sbjct: 159 RQVAVL 164 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 62/290 (21%), Positives = 131/290 (45%), Gaps = 52/290 (17%) Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 L++SDG+ Y D+AY K+ + D +I V+ + Y+ +++ A ++ Sbjct: 360 LMRSDGTTLYTVRDIAYTIFKFNQFNADFVINVIAEEQ--YIPQIQLRGALELLGYSR-- 415 Query: 383 VLLCELVRLYRDGM----PIKMSKRAGDFITLRHV---------------------VDEV 417 E + Y GM ++MS R G IT+ + +D++ Sbjct: 416 --FAENLLHYSYGMVNIQGLRMSGRLGKIITIDEIYEKLDNIVRNKLKEKGGNMENIDDI 473 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP--DL 475 + ++R+ +L ++ L FD ++ ++N Y+QY YAR +I ++ + + Sbjct: 474 ANAALRYAILSVSANKPLSFDLNRIT-SFEQNSGPYLQYTYARAANILAKSTENLSMDKV 532 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 DF S+ + +++ +A++P V +NA L +L +L+ +F+ Sbjct: 533 DF-----------SDLVGDKRNILILIAKFPEVFKNAVDNLRLEDLVAFLRELSDIFNSW 581 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + R +Q + + M+RL +V V+ ++ +GL+++G+ S M Sbjct: 582 YD------KERVLQEQDPRKRMLRLYIVKGVSVVLKNGLSVLGIRSLERM 625 >gi|71668488|ref|XP_821124.1| arginyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener] gi|70886493|gb|EAN99273.1| arginyl-tRNA synthetase, putative [Trypanosoma cruzi] Length = 692 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 25/208 (12%) Query: 50 AMILSR---PLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIV 106 A +LS+ P+ + P+ + E + ++ + ++ +GFIN+ + + ++S ++ Sbjct: 53 AKLLSKATPPMKMSPINVGEELRKNLEENDLIERFEPTPQGFINIAIKQEWAATMVSRLL 112 Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166 GI+ I KV ++F S N MHVGH R ++G+T+ L F G+EV R + Sbjct: 113 KMGIQPP---IIPPKKVLVDFSSPNIAKEMHVGHLRSTIIGETICRLFEFCGFEVHRINH 169 Query: 167 INDAGAQINTLALSVFWRYQQALYN--NDSDLPEGYYPGVYLKHVGKELADKYSSELLNF 224 + D G L L + ++ L + +DL + Y A K E F Sbjct: 170 VGDWGTAFGMLILYLKRQHPNFLTEMPDITDLTKFYRE-----------AKKCFDEDPKF 218 Query: 225 PEEKWLPIVK-----DYSVQAMMKIIRD 247 EE L +VK + S+QA KII D Sbjct: 219 KEEARLQVVKLQALENESIQA-WKIICD 245 >gi|225010550|ref|ZP_03701021.1| arginyl-tRNA synthetase [Flavobacteria bacterium MS024-3C] gi|225005379|gb|EEG43330.1| arginyl-tRNA synthetase [Flavobacteria bacterium MS024-3C] Length = 595 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 20/137 (14%) Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP----QESEFDTSELQLIVHLAEYPRV 508 ++QY YAR +SI R+A DFD +V+P QES E+ L+ L +P Sbjct: 475 FMQYTYARIQSILRKA-------DFD---TSVVPDFERQESFLHEKEVALLKQLFLFPET 524 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 I+ A P +A Y YDL F+ + + + + +N +L + R+ L VA Sbjct: 525 IQLAAHNYSPALVANYTYDLVKAFNSFYQN------VSILGESNEELKVFRVGLSRKVAQ 578 Query: 569 IINSGLNIIGVESPNEM 585 +I L ++G+E P M Sbjct: 579 VIQDALGLLGIEVPERM 595 >gi|221632568|ref|YP_002521789.1| arginyl-tRNA synthetase [Thermomicrobium roseum DSM 5159] gi|221156547|gb|ACM05674.1| arginyl-tRNA synthetase [Thermomicrobium roseum DSM 5159] Length = 716 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 81/360 (22%), Positives = 157/360 (43%), Gaps = 60/360 (16%) Query: 252 LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF 311 L++ D++ E + +R++++ + + +G+ P K +K ++++ + Sbjct: 391 LDVHFDVWFFESEVEEEGRQIVRELLERGIAE--ISDGL---PVVKIDEKLGLEKE--TY 443 Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV 370 R+ P+L+SDG+ Y DLA K K+E+ D I+V+ + Y++++ V Sbjct: 444 RTL--------PILRSDGTTLYSTKDLALTKRKFEQYHVDRAIWVVDVRQTLYLQQIFKV 495 Query: 371 AAAVS-EKKAQINVLLCELVRLYRDGMPIKMS-------------KRAGDFITLRH---- 412 ++ A+ L E V L M ++ +RA + I ++ Sbjct: 496 MELWGFQQAAKCYHLAYETVMLPSGAMSSRLGNVVLYEDVARQVLERALEIIEEKNPTLP 555 Query: 413 ------VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIF 465 V +VG S+++ ML R N+ ++ FD + + P Y+QYA+AR I Sbjct: 556 PEVKASVARQVGLGSLKYGMLSRDNNRVIVFDIEEALSFEGHAAP--YIQYAHARACRIL 613 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 + D P+ + L E+ LI +A +P ++ A +P +A Y+ Sbjct: 614 EKV-DTLPEGPYAL---------DALTREEIDLIEQIALFPDEVQRAADEYKPLVIANYV 663 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 Y+LA F+ + R P L+ + RL +V A + +GL ++G+ +P M Sbjct: 664 YELAKRFNEFY---RVCPVLQAPEPQR----SARLAIVAAARQTLANGLQLLGIAAPEVM 716 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 23/150 (15%) Query: 26 KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85 KK R+V ER R+ A ++ A LSR G AR++ A Sbjct: 66 KKEAKRLVQERVRERAQA-IAEELARRLSRHTGF----------ARVE----------AI 104 Query: 86 KGFINL-YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 G++N+ Y S + +L +++ G E+GR +G +V +E+ N HVGH R Sbjct: 105 NGYLNIVYDSNRFANDVLRTVLAEGSEFGRGE-ARGERVMVEYSQPNTHKAFHVGHLRNV 163 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQI 174 +G+ L+ ++ F+G++V YI D G + Sbjct: 164 CLGNALSRVLRFAGFDVLEANYIGDIGLHV 193 >gi|284175555|ref|ZP_06389524.1| arginyl-tRNA synthetase [Sulfolobus solfataricus 98/2] gi|261602455|gb|ACX92058.1| arginyl-tRNA synthetase [Sulfolobus solfataricus 98/2] Length = 625 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 5/101 (4%) Query: 78 VDSVFIAGKGFINLYLSPSYLRKILSSIVVS-GIEYGRNLIGKGTKVNIEFVSANPTGPM 136 ++ + IAG ++N L+P R + SI +YG + K ++ +E SANP P+ Sbjct: 68 IEKIEIAGI-YLNAKLNP---RNLFVSIFSKLDDDYGLEKVEKPKRIVVEHTSANPIHPL 123 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 H+GH R ++GD LA + G+ V +Y+ND G Q+ L Sbjct: 124 HIGHLRNMILGDALARALRARGHSVNVRFYVNDTGRQVAVL 164 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 60/294 (20%), Positives = 130/294 (44%), Gaps = 60/294 (20%) Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 L++SDG+ Y D+AY K+ + D +I V+ + Y+ +++ A + Sbjct: 360 LMRSDGTTLYTVRDIAYTIFKFNQFNADLVINVIAEEQ--YIPQIQLRGA--------LE 409 Query: 383 VL----LCELVRLYRDGM----PIKMSKRAGDFITLRHV--------------------- 413 +L E + Y GM ++MS R G IT+ + Sbjct: 410 ILGYSRFAENLLHYSYGMVNIQGLRMSGRLGKIITIDEIYEKLDSIVRNKLKEKGGNMEN 469 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 ++++ + ++R+ +L ++ L FD ++ ++N Y+QY YAR +I ++ + Sbjct: 470 INDISNAALRYTILSVSANKPLSFDLNRIT-SFEQNSGPYLQYTYARAANILAKSTESLS 528 Query: 474 --DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 +DF+ + + ++++ +A++P V +N L +L +L+ V Sbjct: 529 IDKVDFN-----------DLVGDKRKILLLIAKFPEVFKNTVDNLRLEDLVAFLRELSDV 577 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ + + R +Q + M++L +V V+ ++ +GL ++G+ S M Sbjct: 578 FNSWYD------KERVLQEQDPGKRMLKLYIVKGVSVVLKNGLGVLGIRSLERM 625 >gi|269986149|gb|EEZ92462.1| Arginine--tRNA ligase [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 589 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 75/302 (24%), Positives = 127/302 (42%), Gaps = 45/302 (14%) Query: 58 GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK---ILSSIVVSGIEYGR 114 G DP IAE I I V V +A G++N+ L+ L K ILS I + + Sbjct: 38 GKDPSVIAEGIAKGI-TSKYVKKV-VALNGYVNINLNFEELEKQEAILSKIELKNT---K 92 Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 NL G + +E S NP +H+GH R + +G+ L + +S V +I D GAQ+ Sbjct: 93 NLFS-GKIIRLEHTSVNPNKALHIGHMRNSYIGEFLRKSLVYSSANVITSNFIEDTGAQV 151 Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE--LLNFPEEKWLPI 232 + + + ++ N DL Y + KE+ + Y ++ LL +E L I Sbjct: 152 ADIIVGFKYMNKKIETNEKFDL--------YCSKIYKEVNESYENDESLLEKRKEVLLKI 203 Query: 233 VK---------DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ 283 DY V ++ L NI++++ D R + ++ Sbjct: 204 EHGDKETLEFLDYIVNKVLLAQLSTLIGENIKYNLL----DLER-----------YILKE 248 Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343 G V + K + + ++ + + + G++V L +SDG+ Y A D+AY Sbjct: 249 GIVKAALDKLMSEKIAKISENEKNKGCIVTDVGGNEV--TLTRSDGTSLYIAKDIAYAMI 306 Query: 344 KY 345 K+ Sbjct: 307 KH 308 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 20/143 (13%) Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 V + S+ +R+ +L S+++ FD ++ V YV Y+Y+R SI ++A Sbjct: 441 VSTLASNVIRYYILRFSPSKMVIFDINDATSLKGDSAV-YVNYSYSRALSILKKANK--- 496 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 DF + FD +E + I + + +++NA +P + YL+ ++ F+ Sbjct: 497 -KDFKVVS---------FDEAENKFIREIIFWDEILDNAVSNLKPNLVCEYLHRISDAFN 546 Query: 534 GHWSHG------RENPRLRFVQA 550 + RE RL V A Sbjct: 547 AFYEKNRIIGDEREESRLLIVTA 569 >gi|71754737|ref|XP_828283.1| arginyl-tRNA synthetase [Trypanosoma brucei TREU927] gi|70833669|gb|EAN79171.1| arginyl-tRNA synthetase, putative [Trypanosoma brucei] Length = 692 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 26/209 (12%) Query: 54 SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYG 113 S P+ P + E + ++ + ++S +GFIN+ + P ++ + ++ GI Sbjct: 60 SPPIKTSPALVGEELKKNLEENDMIESFEPTPQGFINITIKPMWVAGTVGKVLREGIR-P 118 Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173 NL + KV ++F S N MHVGH R ++G+ + L F YEV R +I D G Sbjct: 119 PNLPKQ--KVLVDFSSPNIAKEMHVGHLRSTIIGEAICRLFEFCQYEVHRINHIGDWGTA 176 Query: 174 INTLALSVFWRYQQALYN----NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229 L L F R + + N SDL Y A K E F E+ Sbjct: 177 FGMLIL--FLRRKHPNFTEEVPNISDLTTFYRE-----------AKKCFDEDAEFKEQAR 223 Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 L +VK +QA+ + + +KA I DI Sbjct: 224 LQVVK---LQALEE---ESMKAWKIICDI 246 >gi|261334106|emb|CBH17100.1| arginyl-tRNA synthetase, putative [Trypanosoma brucei gambiense DAL972] Length = 692 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 26/209 (12%) Query: 54 SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYG 113 S P+ P + E + ++ + ++S +GFIN+ + P ++ + ++ GI Sbjct: 60 SPPIKTSPALVGEELKKNLEENDMIESFEPTPQGFINITIKPMWVAGTVGKVLREGIR-P 118 Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173 NL + KV ++F S N MHVGH R ++G+ + L F YEV R +I D G Sbjct: 119 PNLPKQ--KVLVDFSSPNIAKEMHVGHLRSTIIGEAICRLFEFCQYEVHRINHIGDWGTA 176 Query: 174 INTLALSVFWRYQQALYN----NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229 L L F R + + N SDL Y A K E F E+ Sbjct: 177 FGMLIL--FLRRKHPNFTEEVPNISDLTTFYRE-----------AKKCFDEDAEFKEQAR 223 Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 L +VK +QA+ + + +KA I DI Sbjct: 224 LQVVK---LQALEE---ESMKAWKIICDI 246 >gi|320162608|gb|EFW39507.1| arginyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864] Length = 618 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 133/616 (21%), Positives = 233/616 (37%), Gaps = 139/616 (22%) Query: 54 SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS-----PSYLRKILSSIVVS 108 S+ +D LT +L ARI+ + S I + + P++ + +L S + Sbjct: 48 SQSPAVDKLTGGQL-AARIQNELQTSSQAITSVATLGQLIQFGFHRPTFTKDVLHSALTQ 106 Query: 109 GIEYGR-NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167 G +YG IG G ++F S N P H GH R A++G+ L +L+ GY+ Y+ Sbjct: 107 GSKYGEARSIGAGKTAVLDFSSPNIAKPFHAGHLRSAIIGNVLRNLLQAVGYKTVAINYL 166 Query: 168 NDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP 225 D G Q L + F +Y Q+ L ++ P + VY+K +N Sbjct: 167 GDWGKQYGLLGVG-FAKYGSQEKLASS----PLQHLAEVYVK--------------IN-R 206 Query: 226 EEKWLPIVKDYSVQAMMKIIRDDLKA---------------------LNIQHDIFISEDD 264 E + P + D + Q K+ D + LN+Q D++ E Sbjct: 207 EAETDPAIHDQARQHFRKMETGDPETLATWRQFKSLSEVEYRSMYARLNVQFDVYDGESL 266 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD--- 321 H + ++D L G + +S TT ++ + + G V Sbjct: 267 QHELVQQHVASLVDKL---GVKTASEIAASQSDTTTNQALESPPVTLKREDNGALVALFA 323 Query: 322 ----RP--LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAV 374 +P L K++ S TY D+A ++++ D +YV+G + + + ++L + + Sbjct: 324 NPQLKPTVLAKANESSTYLTRDIAAAVSRWQKYKPDLALYVVGPEQALHFEQLFELLRVL 383 Query: 375 --SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD-------EVGSDS--VR 423 SE A C V G MS R G+ + L V++ E+G + R Sbjct: 384 GYSEYAAA-----CRHVAF---GKVEGMSSRTGNMVLLSDVLEEGEQHMREIGEERGLAR 435 Query: 424 FMMLWRKNSELLD-------------------------------------FDFCKVKEQS 446 ++E D FD+ +V Q+ Sbjct: 436 SERTATSSAESTDDASAADQLVDRARVSRSTALAAIVVQDLKSRRLRGYKFDWNQVL-QT 494 Query: 447 KENPVFYVQYAYARCRSIFRQ--AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 Y+ Y +AR S+ R+ + + D+D+ L + S + ++ +A Sbjct: 495 TGTTGPYLLYTHARLCSLKRKMGSNAVAADVDWSLLS----------EPSAMYIVDVVAA 544 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 YP I A EP L L DLA S G + R V+ + ++ RL L Sbjct: 545 YPDAIVRAATQLEPSLLVDQLMDLALAV----SAGLRDLR---VKGASEEVARARLALFE 597 Query: 565 AVASIINSGLNIIGVE 580 + + +GL ++G++ Sbjct: 598 SARINLANGLCLLGLD 613 >gi|310641644|ref|YP_003946402.1| arginyl-tRNA synthetase 2 [Paenibacillus polymyxa SC2] gi|309246594|gb|ADO56161.1| Arginyl-tRNA synthetase 2 [Paenibacillus polymyxa SC2] Length = 574 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 124/556 (22%), Positives = 218/556 (39%), Gaps = 107/556 (19%) Query: 84 AGKGFINLYLSPS-YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 A ++N+ L S ++ +L+ + S E+ + G G +V I+ S N P +GH R Sbjct: 72 ASGAYVNITLDRSVHIPPMLAEL--SKAEFLKPNTGYGQRVVIDMSSPNIAKPFGIGHLR 129 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQIN-TLALSVFWRYQQALYNNDSDLPEGYY 201 V+G L ++ +GY ++ D G Q +A W ++ L ++ P G Sbjct: 130 STVIGAALYRILGETGYVPISVNHLGDWGTQFGKQIAAYKRWGNEEQLQHD----PIGES 185 Query: 202 PGVYLK-HVGKELADKYSSELLNF----------PEEKWLPIVKDYSVQAMMKIIRDDLK 250 +Y++ H E E + ++ W ++ V+ + + Sbjct: 186 LKLYVRFHQEAEHDPSLEEEGREWFRRLEQGDTEAQQLW-----EFFVEVSLSEFDRMYQ 240 Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310 LNI D + E ++ ++ ++ L +G + E S ++ +QL Sbjct: 241 RLNISFDHVLGESFYN----DKMQAVVAQLRAKGLLEE-------SDGALVVRLEDEQL- 288 Query: 311 FRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRL 367 P L K DG+ Y DLA ++E D ++YV+G + + +++ Sbjct: 289 -----------PPCLILKKDGTTIYPTRDLATAIYRHEVMKADRLLYVVGGEQKLHFQQV 337 Query: 368 EAVAAAVSEKKAQINVLLCELV--RLYRDGMPIKMSKRAGDFITLRHVVDE--------- 416 AV E A+ CE V L R KMS R G + L V+DE Sbjct: 338 FAVLKHAGEIWAE----QCEHVPFGLMRFAGK-KMSTRRGKVVKLEEVLDEAVARAQAII 392 Query: 417 ----------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF-YVQYAYA 459 VG ++ F L KN+ L + DF + + E YVQY +A Sbjct: 393 TEKNPNLLEQQAIAEDVGIGAIIFGDL--KNNRLNEVDFSLEEALTFEGETGPYVQYTHA 450 Query: 460 RCRSIFRQAK---DIFPDLDFDLFPR-------NVIPQESEFDTSELQLIVHLAEYPRVI 509 R RS+ +A+ D+ + ++ + N++ E D L+ L Y + Sbjct: 451 RIRSLLEKARARSDVDSNSSDNVLAQDGHSPDLNIVSDEMLGDAG-WALLKQLDRYHGQL 509 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 A EP +A + D A F+ ++ + R V R+QL A + Sbjct: 510 IRAARQLEPSVIARFALDTAQAFNRFYA------KERIVDGGQ-----WRIQLAEQTADM 558 Query: 570 INSGLNIIGVESPNEM 585 + S L ++G+++PN M Sbjct: 559 LASTLRLLGLKAPNRM 574 >gi|290977172|ref|XP_002671312.1| predicted protein [Naegleria gruberi] gi|284084880|gb|EFC38568.1| predicted protein [Naegleria gruberi] Length = 517 Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 123/523 (23%), Positives = 215/523 (41%), Gaps = 110/523 (21%) Query: 51 MILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSG 109 M L L P+ +A+ + I + + V+ + I G I+L L Y+++ +S I Sbjct: 1 MQLGNQLKQSPIDVAKSLGESILNNSEIVEKIDIINNGVISLSLCDEYVKRKISEIFNQQ 60 Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSG-YEVTREYYIN 168 ++ I +V ++F S N MHVGH R ++GD + ++ + G +EV R ++ Sbjct: 61 PLNVKDKI----RVIVDFSSPNMAKRMHVGHLRSTIIGDCICRILEYDGRFEVERINHVG 116 Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLP--EGYYPGVYLKHVGKELADKYSSELLNFPE 226 D G Q L L+ R N DL + P L+ V K D S +L + Sbjct: 117 DFGTQFGML-LAFIER-------NSIDLEKLQTQNPPEQLETVEKYYKD--SKKLFDSD- 165 Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID-NLARQGY 285 P+ KD + Q ++ + + + +++ H I+ + R + I + +D L +G Sbjct: 166 ----PLFKDLAHQKVIALQQGNDESI---HKIWKYLLECSRYEFDSIYERLDVRLVEKGE 218 Query: 286 VY---------EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYF 334 Y E + P + KC K+ + T+ D + PL+ K+DG YTY Sbjct: 219 SYYRDFIPKTLEILNPLIQESNGAKCIFTEKE---QETITEDQKEPPLMVQKADGGYTYD 275 Query: 335 AADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV---------------------A 371 DLA +++ +G +IYV + + ++ V A Sbjct: 276 TTDLATLWYRLFVSKG-KWLIYVTDFGQASHFNKVFKVGEMMKWIDPLENSRDLVWSENA 334 Query: 372 AAVSEKKAQIN-----VLLCELVRLY--RDGMPIKMS-------KRAGDFITLRH----- 412 +++ K +I+ V+L E + + R G +K+ KR+ + I L++ Sbjct: 335 TSLTSSKVRIDHVGFGVVLDEEKKKFRTRSGDTVKLHDLLDEAIKRSYEIIKLKNDERCK 394 Query: 413 -------VVDE--------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457 + DE VG +V++ L + F F K+ + + N Y+ YA Sbjct: 395 ENEEISSLTDEQIMAASKIVGYGAVKYADLRTNRTTNYTFSFDKMLD-FRGNTAVYLLYA 453 Query: 458 YARCRSIFRQA---------KDIFPDLDFDLFPRNVIPQESEF 491 YAR SI ++ KD D LF N+ ESE+ Sbjct: 454 YARISSIIEKSGERELMKEYKDQVAKGDLSLFT-NLKQSESEW 495 >gi|330886170|gb|EGH20071.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. mori str. 301020] Length = 142 Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 1/114 (0%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +E RD HG ++N AM+L++P G+ P +AE ++A + D V V IAG GF+N Sbjct: 30 IQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLIAALPADEQVSKVEIAGPGFLNF 89 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 + + + ++ G +V ++ + N MHVGH R + Sbjct: 90 FQN-TAALAARLDAALADAHLSVRKAGAVQRVVVDLSAPNLAKEMHVGHLRSTI 142 >gi|19354292|gb|AAH24878.1| Arginyl-tRNA synthetase 2, mitochondrial [Mus musculus] Length = 578 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 128/564 (22%), Positives = 221/564 (39%), Gaps = 105/564 (18%) Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYG------RNLI 117 A + ++K D V ++ AG +N ++ L K +L + G +YG +L Sbjct: 65 ARRLAEKLKCDTVVTAI-SAGPRTLNFKINRELLTKAVLQQVTEDGCKYGLKSELFSDLP 123 Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 K ++ +EF S N HVGH R ++G+ +A+L G++VTR YI D G Q L Sbjct: 124 KK--RIVVEFSSPNIAKKFHVGHLRSTIIGNFIANLKEALGHQVTRINYIGDWGMQFGLL 181 Query: 178 ALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-----KYSSEL---LNFPEEK 228 + Y++ L N P + VY++ V KE D K + E L + + Sbjct: 182 GTGFQLFGYEEKLQTN----PLQHLFDVYVQ-VNKEATDDKNVTKLAHEFFHRLEMGDTQ 236 Query: 229 WLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285 L + +D S++ +I K L I D + S + F+R + ++D+ Sbjct: 237 ALSLWQRFRDLSIEEYTQI----YKRLGIYFDEY-SGESFYREKSQDVLKLLDSKGLLQK 291 Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345 EG + S T G +++SDG+ Y DLA + Sbjct: 292 TAEGNVVVDLSGTG-----------------GLSSVCTVMRSDGTSLYATRDLAAAIHRM 334 Query: 346 ER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404 ++ FD MIYV + +++ + + A+ C+ V G+ M R Sbjct: 335 DKYNFDTMIYVADKGQRRHFQQVFQMLKIMGYDWAE----RCQHVPF---GIVKGMKTRR 387 Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSE-------------------------LLDFDF 439 G L V++EV S ++ M + + L D+ F Sbjct: 388 GGVTFLEDVLNEVQSRMLQNMASIKTTKQLENPQETAERVGLAAVIIQDFRGTLLSDYQF 447 Query: 440 CKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498 + QS+ + ++QY +AR S+ + L NV + S LQ Sbjct: 448 SWDRVFQSRGDTGVFLQYTHARLCSLEETFGCGY------LNDSNVACLQEPQSVSILQ- 500 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYD---LASVFHGHWSHGRENPRLRFVQANNRKL 555 HL + V+ ++ +P + YL LA+V H V+ + + Sbjct: 501 --HLLRFDEVLYLSSQDLQPKHIVSYLLTLSHLAAVAHKTLK----------VKDSPPDV 548 Query: 556 TMMRLQLVHAVASIINSGLNIIGV 579 RL L AV S++ +G+ ++G+ Sbjct: 549 AGARLHLFKAVRSVLANGMKLLGI 572 >gi|262382533|ref|ZP_06075670.1| arginyl-tRNA synthetase [Bacteroides sp. 2_1_33B] gi|301308226|ref|ZP_07214180.1| arginine--tRNA ligase [Bacteroides sp. 20_3] gi|262295411|gb|EEY83342.1| arginyl-tRNA synthetase [Bacteroides sp. 2_1_33B] gi|300833696|gb|EFK64312.1| arginine--tRNA ligase [Bacteroides sp. 20_3] Length = 597 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 69/305 (22%), Positives = 125/305 (40%), Gaps = 66/305 (21%) Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS------------------ 361 ++ LL++DG+ Y D+ K +++ + MIYV+G++ + Sbjct: 319 EKLLLRADGTSVYMTQDIGTAKLRFDDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEFG 378 Query: 362 --------GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL--- 410 G V+ E + + L+ E++ R+ +S+ G + Sbjct: 379 KGLVHFSYGMVELPEGKMKSREGTVVDADDLMAEMISTARE-----ISQELGKLDEMTPE 433 Query: 411 --RHVVDEVGSDSVRFMMLW---RKN-----SELLDFDFCKVKEQSKENPVFYVQYAYAR 460 ++ VG S+++ +L RKN E +DF+ N ++QY YAR Sbjct: 434 EAENIARIVGLGSLKYFILKVDPRKNMTFNPKESIDFN---------GNTGPFIQYTYAR 484 Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520 RS+ R+A + L L P E LI +A+Y +++ A P Sbjct: 485 IRSVLRKAAEQGIALPEQL------PLTFAISEKEENLIQMIADYAEIVKEAGKLYSPAC 538 Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 +A Y+YDL ++ + ++ N +L RL L VA I+ SG++++G+E Sbjct: 539 VANYIYDLVKEYNQFYHD------FSILREENPELKNFRLVLSANVAKIVKSGMDLLGIE 592 Query: 581 SPNEM 585 P M Sbjct: 593 VPERM 597 Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 2/90 (2%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCA 144 KGF+NL ++ S +L+SI YG + + + V IE+ S N P+H+GH R Sbjct: 81 KGFLNLTVACSCWIDLLNSINEQPA-YGIIPVTEQSPLVMIEYSSPNTNKPLHLGHVRNN 139 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQI 174 ++G +L+ +M +G ++ + +ND G I Sbjct: 140 LLGYSLSKIMKANGNQIVKTNIVNDRGIHI 169 >gi|168334916|ref|ZP_02693036.1| arginyl-tRNA synthetase [Epulopiscium sp. 'N.t. morphotype B'] Length = 565 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 122/537 (22%), Positives = 214/537 (39%), Gaps = 87/537 (16%) Query: 87 GFINLYLSPSYL-RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 +IN Y+ + + + +L ++ YG + I++ S N P H+GH R V Sbjct: 78 AYINFYVDKTVVVQAVLDKVLAEKDGYGFAAKKDKGNIVIDYSSPNIAKPFHIGHLRSTV 137 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205 +G++L + GY ++ D G Q L ++ Y++ Y+ D+ + G+ Sbjct: 138 IGNSLYRIFEALGYNCIGINHLGDWGTQFGKLIVA----YEK--YSTKEDVEQ---KGI- 187 Query: 206 LKHVGKELADKYSSELLNFPEE-KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIF-ISED 263 +EL Y + F +E K P ++D + + K+ + D AL + IS Sbjct: 188 -----QELLRIY----VKFHDEAKSDPSLEDLARENFTKMEQGDANALALWRWFKEISLK 238 Query: 264 DFHRGDPSPIRDI-IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS---TMVGDD 319 +F R + DI D+L + + + + K ++D K+L S ++ D Sbjct: 239 EFER--VYKMLDISFDSLNGEAFYNDKMDRVIK-------ELDDKKLTKISEGAKIIELD 289 Query: 320 VDRPLL--KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDH----SGYVKRLEAV 370 P L K DGS Y D+ Y K Y+ F IYV S + K +E + Sbjct: 290 NMSPCLITKKDGSSLYATRDITAALYRKETYD--FKKCIYVTALAQNLHFSQFFKVIEKM 347 Query: 371 AAAVSEKKAQI-----------------NVLLCE--LVRLYRDGMPIKMSKRAGDFITLR 411 A S + NVLL E L + I + ++ + Sbjct: 348 GYAWSVDLVHVPFGMVSMETGSLSTRSGNVLLLEEILAEAVKKTKEI-IEEKNPNLENKE 406 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 V +VG ++ F ++ + + F + KV E YVQY YAR S+ R++ Sbjct: 407 EVAQDVGIGAIIFDDMYNTIIKDIQFSWEKVLNFDGETGP-YVQYTYARANSVLRKSGMA 465 Query: 472 FPDLD---FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 D++ DL D + L+ + + +I A EP +A Y +L Sbjct: 466 ISDIENICVDLI----------IDEQSVALVKQIGAFNSMITEAAEKYEPSVIARYAVNL 515 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A F+ + + ++ KL RL LV + I + L ++G+++P +M Sbjct: 516 AKCFNKFYHDNS-------ILVDDMKLKKARLALVVSTMYTIKNALWLLGIKAPKQM 565 >gi|239612563|gb|EEQ89550.1| arginyl-tRNA synthetase [Ajellomyces dermatitidis ER-3] Length = 634 Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 135/618 (21%), Positives = 242/618 (39%), Gaps = 124/618 (20%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTI---AELIVARIKIDPDVDSVFIAGKGFIN 90 I+R + AHG + A + + +D + + ++L + +P VFI Sbjct: 61 IQRTQVLAHGDVMVVVARLRLKGANVDQVALDLSSKLCGISLISNPVPKGVFIP------ 114 Query: 91 LYLSPSYL-RKILSSIV----------VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139 ++ S + L R IL I ++G++ N KV +EF S N H G Sbjct: 115 IFFSATTLPRLILPYIFDRRQLYGHDKIAGLKQPENEAAGKKKVIVEFSSPNIAKEFHAG 174 Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLP 197 H R ++G +A+L G++V + Y+ D G Q LA V W+ + L+ + Sbjct: 175 HLRSTIIGAYIANLYESMGWDVVKINYLGDWGKQFGLLA--VGWQKFGSEELFQKEP--- 229 Query: 198 EGYYPGVYLKHVGKELADKYSS-ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 LKH L D Y+ L PE++ +D Q +I + K L + Sbjct: 230 --------LKH----LLDVYAKINTLFKPEQEASKNARDNG-QDTSEI---ENKGLYAER 273 Query: 257 DIFISEDDFHRGDPSPI------RDI-ID---------NLARQGYVYEGILPPPKSKTTQ 300 + F + GDP + RDI I+ N+A Y E + P ++ + Sbjct: 274 NAFFKK--MEDGDPDALSLWRRFRDISIERYIRTYARLNIAFDEYSGESTVRPETIESVE 331 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD 359 K M +++ ++ ++ +R G+ TY D+A + + FD MIYV+ ++ Sbjct: 332 K--MLKEKGIYEE----NEGNR-----GGTTTYLLRDIAAVLERVGKYKFDKMIYVVSAE 380 Query: 360 HSGYVKRLEAVAAA-----VSEKKAQINV--------------LLCELVRLYRDGMPIKM 400 Y +R+ ++ K +N LL +++ + M M Sbjct: 381 QDSYFQRVFKTIEIMGYPDIATKLVHVNFGKVQGMSSRLGTVKLLSDILDECGNAMHEVM 440 Query: 401 SKRAGDFITL---RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQY 456 + + + V D VG +V + K FD ++ + P Y+QY Sbjct: 441 RANEAKYAQVPDPKAVADVVGITAVMAQDMSGKRINNYAFDITRMTSFEGDTGP--YLQY 498 Query: 457 AYARCRSIFRQAK---DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513 ++AR SI R+A+ D DF L + + ++ +A+YP + +A Sbjct: 499 SHARLCSIMRKAQLTADQVAKADFTLLK----------EPHAVDIVRLVAQYPDITSHAF 548 Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM-RLQLVHAVASIINS 572 EP + YL+ L + ++ + N M+ R L ++ + Sbjct: 549 KTLEPITVLTYLFRLTHQVSSAYD------VIKVLGMNEGPEVMLARSALYEGARQVLEN 602 Query: 573 GLNIIGV-----ESPNEM 585 G+ ++G ESP+EM Sbjct: 603 GMRLLGFTPVARESPSEM 620 >gi|240120047|ref|NP_852071.2| probable arginyl-tRNA synthetase, mitochondrial precursor [Mus musculus] gi|115502849|sp|Q3U186|SYRM_MOUSE RecName: Full=Probable arginyl-tRNA synthetase, mitochondrial; AltName: Full=Arginine--tRNA ligase; Short=ArgRS; AltName: Full=Arginyl-tRNA synthetase-like; Flags: Precursor gi|74220703|dbj|BAE33614.1| unnamed protein product [Mus musculus] gi|123232893|emb|CAM26873.1| arginyl-tRNA synthetase 2, mitochondrial (putative) [Mus musculus] gi|148673526|gb|EDL05473.1| arginyl-tRNA synthetase-like, isoform CRA_a [Mus musculus] Length = 578 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 128/567 (22%), Positives = 222/567 (39%), Gaps = 111/567 (19%) Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYG------RNLI 117 A + ++K D V ++ AG +N ++ L K +L + G +YG +L Sbjct: 65 ARRLAEKLKCDTVVTAI-SAGPRTLNFKINRELLTKAVLQQVTEDGCKYGLKSELFSDLP 123 Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 K ++ +EF S N HVGH R ++G+ +A+L G++VTR YI D G Q L Sbjct: 124 KK--RIVVEFSSPNIAKKFHVGHLRSTIIGNFIANLKEALGHQVTRINYIGDWGMQFGLL 181 Query: 178 ALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-----KYSSEL---LNFPEEK 228 + Y++ L N P + VY++ V KE D K + E L + + Sbjct: 182 GTGFQLFGYEEKLQTN----PLQHLFDVYVQ-VNKEATDDKNVTKLAHEFFHRLEMGDTQ 236 Query: 229 WLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGY 285 L + +D S++ +I K L I D + S + F+R + ++D+ Sbjct: 237 ALSLWQRFRDLSIEEYTQI----YKRLGIYFDEY-SGESFYREKSQDVLKLLDSKGLLQK 291 Query: 286 VYEGILPPPKSKT---TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342 EG + S T + C +++SDG+ Y DLA Sbjct: 292 TAEGNVVVDLSGTGDLSSVC--------------------TVMRSDGTSLYATRDLAAAI 331 Query: 343 CKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401 + ++ FD MIYV + +++ + + A+ C+ V G+ M Sbjct: 332 HRMDKYNFDTMIYVADKGQRRHFQQVFQMLKIMGYDWAE----RCQHVPF---GIVKGMK 384 Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE-------------------------LLD 436 R G L V++EV S ++ M + + L D Sbjct: 385 TRRGGVTFLEDVLNEVQSRMLQNMASIKTTKQLENPQETAERVGLAAVIIQDFRGTLLSD 444 Query: 437 FDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495 + F + QS+ + ++QY +AR S+ + L NV + S Sbjct: 445 YQFSWDRVFQSRGDTGVFLQYTHARLCSLEETFGCGY------LNDSNVACLQEPQSVSI 498 Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYD---LASVFHGHWSHGRENPRLRFVQANN 552 LQ HL + V+ ++ +P + YL LA+V H V+ + Sbjct: 499 LQ---HLLRFDEVLYLSSQDLQPKHIVSYLLTLSHLAAVAHKTLQ----------VKDSP 545 Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGV 579 + RL L AV S++ +G+ ++G+ Sbjct: 546 PDVAGARLHLFKAVRSVLANGMKLLGI 572 >gi|218264603|ref|ZP_03478391.1| hypothetical protein PRABACTJOHN_04097 [Parabacteroides johnsonii DSM 18315] gi|218221889|gb|EEC94539.1| hypothetical protein PRABACTJOHN_04097 [Parabacteroides johnsonii DSM 18315] Length = 597 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 68/308 (22%), Positives = 125/308 (40%), Gaps = 72/308 (23%) Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHS------------------ 361 ++ LL++DG+ Y D+ K +++ + MIYV+G++ + Sbjct: 319 EKLLLRADGTSVYMTQDIGTAKLRFDDYPINKMIYVVGNEQNYHFQVLSILLDKLGFEFG 378 Query: 362 --------GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL--- 410 G V+ E + + L+ E+V R+ +S+ G + Sbjct: 379 KGLVHFSYGMVELPEGKMKSREGTVVDADDLMEEMVGTARE-----ISQELGKMDEMTPE 433 Query: 411 --RHVVDEVGSDSVRFMMLW---RKN-----SELLDFDFCKVKEQSKENPVFYVQYAYAR 460 ++ VG S+++ +L RKN E +DF+ N ++QY YAR Sbjct: 434 EAENIARMVGLGSLKYFILKVDPRKNMTFNPKESIDFN---------GNTGPFIQYTYAR 484 Query: 461 CRSIFRQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 RS+ R+A + + P+ +P + E LI +A+Y V+ A Sbjct: 485 IRSVLRKAAEQGIVLPEQ---------LPTTTTISEKEENLIQMIADYASVVREAGKEYS 535 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 P +A Y YDL ++ + ++ N ++ RL L VA I+ S ++++ Sbjct: 536 PALIANYTYDLVKEYNQFYHD------FSILREENEEVKEFRLVLSANVAKIVKSAMSLL 589 Query: 578 GVESPNEM 585 G+E P M Sbjct: 590 GIEVPERM 597 Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 71/146 (48%), Gaps = 3/146 (2%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 +++ +++ + GHL+ L T E+ ++ +P V + F KGF+ Sbjct: 26 NQVQLQKTKKEFKGHLTLVVFPFLRMSKKSPEQTAQEIGEYLLRHEPAV-AEFNVIKGFL 84 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGD 148 NL ++ + +L+ I YG + + + V IE+ S N P+H+GH R ++G Sbjct: 85 NLTIACACWIDLLNGIN-GQPSYGIVPVTEQSPLVMIEYSSPNTNKPLHLGHVRNNLLGY 143 Query: 149 TLASLMAFSGYEVTREYYINDAGAQI 174 +L+ +M +G +V + +ND G I Sbjct: 144 SLSEIMKANGNKVVKTNIVNDRGIHI 169 >gi|330836969|ref|YP_004411610.1| arginyl-tRNA synthetase [Spirochaeta coccoides DSM 17374] gi|329748872|gb|AEC02228.1| arginyl-tRNA synthetase [Spirochaeta coccoides DSM 17374] Length = 587 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 69/286 (24%), Positives = 127/286 (44%), Gaps = 47/286 (16%) Query: 324 LLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 LL+SDG+ Y D+ ++E FD++IYV+ S+ + + L V + A Sbjct: 313 LLRSDGTSLYMTQDIGTAVQRHEDWPFDSLIYVVASEQQYHFRVLFHVLEKLGYSWAPTL 372 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD------ 436 L + +G KM R G + ++D + + + ++ + +++ D Sbjct: 373 YHLSYGMVNLPEG---KMKSREGTVVDADDLIDNLTALAKEEIISKGRENDVDDINATAA 429 Query: 437 ------FDFCKVKEQSKENPVF--------------YVQYAYARCRSIFRQAKDI---FP 473 ++ ++ ++ +F Y+QY AR S+ R+ +D+ F Sbjct: 430 SIALGALNYYLLQVTPSKDMIFNPKDSISFNGNTGPYLQYMGARISSMMRKWEDMREDFK 489 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 D+ FD P +I + E +L+ LA YP V+ A ++P L YLYDL+ F Sbjct: 490 DVPFD--PSVLILDD------ERELVRSLAAYPEVVGKAGEGKDPSVLTAYLYDLSRTFS 541 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 W H +NP L+ A+++ L R++L V ++ + +IGV Sbjct: 542 -RWYH--DNPVLK---ADSKSLVCARVELSSMVLYVLKNAFYLIGV 581 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 4/117 (3%) Query: 61 PLTIAELIVARIKIDPD--VDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLI 117 P IA L+ +I+ P + ++G ++N+ + P+ ++ S I G YG+ Sbjct: 62 PPHIAALLKEKIEALPTRPAGELLVSGP-YLNVKIDIPTIAAELSSMIAREGTSYGKGSA 120 Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 G +V +EF N P+H+GH R +G++++ ++ +G +V + IN+ G I Sbjct: 121 FDGKRVMVEFSCPNTNKPLHLGHLRNDSLGESVSRILKANGADVRKVNLINNRGVHI 177 >gi|294934539|ref|XP_002781131.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983] gi|239891437|gb|EER12926.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983] Length = 508 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 90/348 (25%), Positives = 149/348 (42%), Gaps = 46/348 (13%) Query: 43 GHLSTNAAMILSR------PLGLD-PLTIAELIVARIKIDP--DVDSVFIAGKGFINLYL 93 G N AM L++ P G+ P I E I + + + + +SV +A GF+ + L Sbjct: 41 GDYQCNNAMGLAKKFKSELPDGMKIPKQIGEKIKSNLMEESPEEFESVTVAPAGFVTVKL 100 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGT--KVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 S ++ K L+S G + +L K KV ++ S N MHVGH R ++G+T++ Sbjct: 101 SSGWIAKQLTSKCKDG-KVTLDLPNKEAPRKVIVDMSSPNIAKEMHVGHLRSTILGETVS 159 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK 211 ++ +SG +V R ++ D G Q L + Y L+ + P V Sbjct: 160 RILEYSGNDVHRINHVGDWGTQFGMLIEHMKDAYPDFLH---------HTPEV------S 204 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD---LKALNIQHDIFISEDDFHRG 268 +L Y + F EE P K S + ++ + D KA I D IS F Sbjct: 205 DLQTFYKAAKKRFDEE---PDFKKRSQEEVVALQSGDEYARKAWQICCD--ISRKSF--- 256 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK----CDMDRKQLLFRSTMVGDDVDRPL 324 + R I+ L QG + + P +T +K + + + +F DDV + Sbjct: 257 EEVYNRLGIEGLKEQGESFYNEMIGPTVETLEKEGLVVESNGAKCIFTDV---DDVPMMV 313 Query: 325 LKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371 +KSDG Y Y + D+ A + + D ++Y+ + K+L VA Sbjct: 314 VKSDGGYGYDSTDVTAVWYRLTQLHADEVVYITDLGQEVHFKKLFEVA 361 >gi|227872248|ref|ZP_03990609.1| possible arginine--tRNA ligase [Oribacterium sinus F0268] gi|227841934|gb|EEJ52203.1| possible arginine--tRNA ligase [Oribacterium sinus F0268] Length = 310 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 66/248 (26%), Positives = 110/248 (44%), Gaps = 23/248 (9%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-----KIDPDVDSVFIAGKG 87 V RP C + +N A++ ++ +P+ +AE + + K P SV G Sbjct: 30 VSNRPDLCDY---QSNGALMGAKKYQENPIALAEKVKGFLEKKSYKDTPLFSSVEAVKPG 86 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGK-GTKVNIEFVSANPTGPMHVGHCRCAVV 146 F+N+ LSP +L L + E L K G K+ +++ AN P+HVGH R AV+ Sbjct: 87 FLNVKLSPQFLGAYLQGMQT---EEQNGLHEKEGRKILLDYGGANVAKPLHVGHLRSAVI 143 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206 G+ L + G V + ++ D G Q+ + + R + S+L E YP Sbjct: 144 GEALKRMGKRLGNNVVGDVHLGDWGLQMGLIITELEDRGELEKPFTISELEE-IYPFASK 202 Query: 207 KHVGK-ELADKYSSELLNFPEEKWLPIVKDYSV-----QAMMKIIRDDLK----ALNIQH 256 K K E + + E N +E L + + V + +M++ DLK AL++ Sbjct: 203 KAKEKDEAGNLLNEEYANRAKENTLKLQQGDPVFHKVWERIMEVSVADLKKNYEALDVHF 262 Query: 257 DIFISEDD 264 D++ E D Sbjct: 263 DLWKGESD 270 >gi|89099438|ref|ZP_01172314.1| arginyl-tRNA synthetase [Bacillus sp. NRRL B-14911] gi|89085824|gb|EAR64949.1| arginyl-tRNA synthetase [Bacillus sp. NRRL B-14911] Length = 562 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 4/146 (2%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IE P++ AHG L+ L++ + P IA +++ +D G ++N++ Sbjct: 28 LIEVPKNTAHGDLAF-PCFTLAKKMKQAPAVIAAEAAGKLQ-HSLIDQAEAHGP-YLNIF 84 Query: 93 LSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 S + +IL S++ +G YG + +G G + I+F + N P +GH R V+G++++ Sbjct: 85 FSKEKVGLEILQSLLEAGSLYGNSSVGTGKTITIDFSAPNIAKPFSMGHLRSTVIGNSIS 144 Query: 152 SLMAFSGYEVTREYYINDAGAQINTL 177 + GYEV R ++ D G Q L Sbjct: 145 LIAEKCGYEVIRINHLGDWGTQFGKL 170 >gi|332827351|gb|EGK00111.1| arginyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286] Length = 598 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 73/308 (23%), Positives = 129/308 (41%), Gaps = 58/308 (18%) Query: 315 MVGDDVD-RPLLKSDGSYTYFAADL--AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVA 371 + D +D + LL+SDG+ Y D+ A + K + MIYV+G++ + + + L V Sbjct: 312 LTADGLDHKLLLRSDGTSVYMTQDIGTAQQRFKAHKDLSEMIYVVGNEQNYHFQVLSIVL 371 Query: 372 AAVSEK--KAQIN-----VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------- 416 + + K ++ V L E R+G + + I+ V E Sbjct: 372 DKLGYEFGKGLVHFSYGMVELPEGKMKSREGTVVDADDLVEEMISTAKVTSEELGKLDGA 431 Query: 417 -----------VGSDSVRFMMLW---RKN-----SELLDFDFCKVKEQSKENPVFYVQYA 457 VG ++++ +L +KN E +DF+ N ++QY Sbjct: 432 TEDEANNIARIVGMGALKYFILKVDPKKNMTFNPKESIDFN---------GNTGPFIQYT 482 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 YAR +S+ R+A D + L P +++ E LI AEY V++ A Sbjct: 483 YARIQSVIRKAGDQGLSIPLSL-PTDIV-----LTPKEENLIQLAAEYAAVVKQAGDEYN 536 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 P +A Y+Y+L ++ + ++ N L RL L V I+ SG++++ Sbjct: 537 PALIANYIYELVKEYNQFYHD------YTILKEENAALRDFRLVLSQEVGKIVKSGMSLL 590 Query: 578 GVESPNEM 585 G+E P+ M Sbjct: 591 GIEVPDRM 598 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%) Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYG-RNLIGKGTK 122 I E +VA +V+S F KGF+NL +S + + L+S V S YG + + Sbjct: 63 IGEWLVANT---SEVES-FNVIKGFLNLTISGACWLQELNS-VRSVANYGIQEIKADAPL 117 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 V +E+ S N P+H+GH R ++G L+ ++ +G V + +ND G I Sbjct: 118 VMVEYSSPNTNKPLHLGHVRNNLLGFALSEVLKANGKRVLKTNIVNDRGIHI 169 >gi|34540109|ref|NP_904588.1| arginyl-tRNA synthetase [Porphyromonas gingivalis W83] gi|39932030|sp|Q7MXD5|SYR_PORGI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|34396420|gb|AAQ65487.1| arginyl-tRNA synthetase [Porphyromonas gingivalis W83] Length = 597 Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 69/305 (22%), Positives = 123/305 (40%), Gaps = 66/305 (21%) Query: 321 DRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHS------------------ 361 ++ LL++DG+ Y D+ K ++ + + MIYV+G++ + Sbjct: 319 EKLLLRADGTSVYMTQDIGTAKMRFNDYPINRMIYVVGNEQNYHFQVLSILLDRLGFEFG 378 Query: 362 --------GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL--- 410 G V+ E + + L+ E++R +++ AG + Sbjct: 379 KGLVHFSYGMVELPEGKMKSREGTVVDADDLMDEMIR-----TAAEIAAEAGKAAEMDEE 433 Query: 411 --RHVVDEVGSDSVRFMMLW---RKN-----SELLDFDFCKVKEQSKENPVFYVQYAYAR 460 R V VG S+++ +L RKN E +DF+ N +VQY YAR Sbjct: 434 ESREVARIVGLGSLKYFILKVDPRKNMTFNPKESIDFN---------GNTGSFVQYTYAR 484 Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520 RS+ R+A+ D+ L P + E LI ++EY V+ A + P Sbjct: 485 IRSLMRRAEAAGYDIPSQL------PTDLPLSEKEEALIQKVSEYAEVVSEAGHSYSPAL 538 Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 +A Y+YDL ++ + ++ + ++ RL L VA + G ++G+E Sbjct: 539 IANYIYDLVKEYNQFYHD------FSVLKEEDERIRAFRLALSEVVALTMRKGFALLGIE 592 Query: 581 SPNEM 585 P M Sbjct: 593 MPERM 597 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 2/90 (2%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCA 144 KGF+NL ++P ++L+ I I +G + + + V +E+ S N P+H+GH R Sbjct: 81 KGFLNLTIAPRVWLELLNEIRAD-INFGHKVATEDSPLVMVEYSSPNTNKPLHLGHVRNN 139 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQI 174 ++G +L+ +M +GY V + +ND G I Sbjct: 140 LLGYSLSEIMKANGYRVVKTNIVNDRGIHI 169 >gi|225389885|ref|ZP_03759609.1| hypothetical protein CLOSTASPAR_03634 [Clostridium asparagiforme DSM 15981] gi|225044078|gb|EEG54324.1| hypothetical protein CLOSTASPAR_03634 [Clostridium asparagiforme DSM 15981] Length = 350 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 36/279 (12%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA-GKGFIN 90 ++ RP C + N +M ++ P+ IA +V ++ + S+ A GFIN Sbjct: 29 VLSNRPDLCEY---QCNGSMAAAKAYRKKPIDIANGVVEQLGDGQGMFSMVQAVMPGFIN 85 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 L LS +L + + +G + G K + +++ AN P+HVGH R AV+G+++ Sbjct: 86 LKLSGQFLADYMKGMA-AGEKLGLEKPEKPETIIVDYGGANVAKPLHVGHLRAAVIGESI 144 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 L F G+ + + ++ D G Q+ + + R + +Y ++S G YP +G Sbjct: 145 KRLGNFLGHHMIGDVHLGDWGLQMGLIIEELRDRKPELVYFDESYT--GEYPEEAPFTIG 202 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMK--------------IIR---DDLKA-- 251 EL + Y + E++ K+ + QA +K IIR DLK Sbjct: 203 -ELEEIYPAASAKSKEDE---AFKERAHQATLKLQNGYAPFRAIWNHIIRVSVTDLKKNY 258 Query: 252 --LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288 LN+ D++ E D +P I +I+ L +G YE Sbjct: 259 SNLNVTFDLWKGESD---AEPY-IPKLINLLTEKGLAYE 293 >gi|330721860|gb|EGG99825.1| Arginyl-tRNA synthetase [gamma proteobacterium IMCC2047] Length = 462 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 73/295 (24%), Positives = 130/295 (44%), Gaps = 58/295 (19%) Query: 326 KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVA---AAVSEKKAQI 381 KSDG + Y +DLA + + E + ++Y + + + +++++ +A V+E Sbjct: 191 KSDGGFLYATSDLAALRYRQNELNAERILYFVDARQALHLQQVFTIARKAGFVNENTGLE 250 Query: 382 NVLLCELVRLYRDGMPIKMS---------------KRAGDFI----------TLRHVVDE 416 ++ + + +DG P K +RA I T + V + Sbjct: 251 HLAFGTM--MGQDGKPFKTRTGGTVKLAALLEESVERAAQLIAEKDPDLDAETRQQVARK 308 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARCRSIFRQAKDIFPDL 475 VG +V++ L + + D+ F S E N Y+QYAY+R +SIFR+A Sbjct: 309 VGIGAVKYADLSKNRTS--DYIFNWDSMLSFEGNTAPYLQYAYSRIQSIFRKA------- 359 Query: 476 DFDLFPRNVIPQESEFD-----TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 V PQ E + ++E+ L + L ++ V+E P L YLY+LAS Sbjct: 360 -------GVEPQALEGELQLALSNEVALGLKLLQFSEVVEQVADDCAPNVLCAYLYELAS 412 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + P L+ + + + RLQL H VA +++GL+++G+E M Sbjct: 413 EYMSFY---EACPILK--EGVDEQTRGSRLQLCHLVARTLSTGLDLLGIEVMERM 462 Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 30/53 (56%) Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 +++ N MHVGH R ++GD + ++ FSG +V R+ ++ D G Q L Sbjct: 1 MDYSGPNLAKEMHVGHLRSTIIGDAVVRVLEFSGDKVIRQNHMGDWGTQFGML 53 >gi|289812032|ref|ZP_06542661.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 259 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 67/269 (24%), Positives = 115/269 (42%), Gaps = 28/269 (10%) Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI--EFVSANPTGPMHVGHCR 142 G GFIN++L P++L + + + S R + + T+ I ++ + N MHVGH R Sbjct: 1 GPGFINIFLEPAFLAEQVQQALTSD----RLGVSQPTRQTIVVDYSAPNVAKEMHVGHLR 56 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202 ++GD + F G+ V R ++ D G Q L + W +Q N D+ Sbjct: 57 STIIGDAAVRTLEFLGHHVIRANHVGDWGTQFGML---IAWLEKQQ-QENAGDMALADLE 112 Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262 G Y A K+ E F E +VK +Q+ R+ + L DI +++ Sbjct: 113 GFYRD------AKKHYDEDETFAERARNYVVK---LQSGDTYFREMWRKLV---DITMTQ 160 Query: 263 DD--FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV---G 317 + + R + + RD + + + GI+ K+K + + ++F G Sbjct: 161 NQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGL-AVESEGATVVFLDEFKNKEG 219 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYE 346 D + + K DG Y Y D+A K +YE Sbjct: 220 DPMGVIIQKKDGGYLYTTTDIACAKYRYE 248 >gi|329764907|ref|ZP_08256496.1| arginyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329138576|gb|EGG42823.1| arginyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 516 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 23/178 (12%) Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE-NPVFYVQYAYARC-RSIFRQ 467 + H+V VG+ +R+ M+ + +++ FD VK S E + Y+QY +AR R I + Sbjct: 360 IAHIV-SVGT--LRYEMIKQDLDKIITFDL--VKSLSLEGDTASYIQYTHARASRIIEKS 414 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 + D+DF L D SEL L+ + + V+ NA P +A Y +D Sbjct: 415 GRSPSIDVDFSLLT----------DDSELGLVKTIGLFELVVLNAAQNLSPKVIARYCHD 464 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA F+ + H ++ + ++KL RL LV++ + L ++G+E+P++M Sbjct: 465 LAVSFNSFYEH------VKVIDLGDQKLENSRLCLVNSFKMTLEKSLGLLGIEAPDKM 516 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 37/58 (63%) Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 +GK + + +E S NP +H+GH R ++GDT+A ++ S Y+V Y++D+G Q+ Sbjct: 1 MGKNSSIVVEHTSVNPNKALHIGHIRNIIIGDTIARILKKSNYKVNVLNYVDDSGLQV 58 >gi|148655458|ref|YP_001275663.1| arginyl-tRNA synthetase [Roseiflexus sp. RS-1] gi|148567568|gb|ABQ89713.1| arginyl-tRNA synthetase [Roseiflexus sp. RS-1] Length = 613 Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 5/134 (3%) Query: 54 SRPLGLDPLTIAELIVARIKIDPD--VDSVFIAGKGFINLYL-SPSYLRKILSSIVVSGI 110 ++ G+ P +A+ IV + ++ + SV G F+N L +P +L + G Sbjct: 48 AKEAGIAPPQLAQRIVEKAQVPAGSLIGSVEATGP-FVNFSLDAPGLAAAVLDEVERLGA 106 Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170 YG + G G + I++ S N MHVGH R ++G +L + F GY V + ++ D Sbjct: 107 RYGSDDQGAGKTIVIDYSSPNVAKTMHVGHIRSTIIGQSLYHIFDFLGYRVIGDNHLGDW 166 Query: 171 GAQIN-TLALSVFW 183 G Q +A V W Sbjct: 167 GKQFGMNIAAIVRW 180 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 72/295 (24%), Positives = 123/295 (41%), Gaps = 54/295 (18%) Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFD--NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381 L +SD Y DLA + ER F +IYV+ + + ++L A+A A+ + I Sbjct: 340 LQRSDSGTLYHTRDLACIVYR-EREFHPAKIIYVVDARQELHFRQLFALARAMGYAQ-DI 397 Query: 382 NVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDE------------------------ 416 ++ ++ + G P +S RAG+ + L ++DE Sbjct: 398 ELIHVRFGTIFDQQGRP--LSTRAGNMVYLADLLDEAHARARAVVEQASPDLSEAEKEAI 455 Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD--- 470 VG +V + L++ + D+ ++ + N Y+QY +ARC SI R+A + Sbjct: 456 AEAVGVGAVIYNDLYQDPRRDIRLDWERML-AIEGNSAPYIQYMHARCCSILRKAAEEGI 514 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 D L SE +I LA+ P + A P+ +A + Y+ A Sbjct: 515 AAEGGDAALLTH----------PSETAVIKQLAKLPGAVREAGERYAPFVIAEWCYETAR 564 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R+ LR A L RL+LV A A + +GL ++G+++P M Sbjct: 565 ALSAFY---RDCSVLR---AETPALRAARLRLVAATAQGLRNGLALLGIKAPERM 613 >gi|254382504|ref|ZP_04997863.1| arginyl-tRNA synthetase [Streptomyces sp. Mg1] gi|194341408|gb|EDX22374.1| arginyl-tRNA synthetase [Streptomyces sp. Mg1] Length = 600 Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 19/169 (11%) Query: 24 VEKKILDRIVIERP---------RDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI 74 V +++ D +V P R N + L++ +P +A +V I Sbjct: 11 VNQRVADALVSALPEAGAADPLLRRSDRADFQANGILALAKKAKANPRELATTVVGGIPT 70 Query: 75 DPDVD---SVFIAGKGFINLYLSPSYLRKILSSIVVS---GIEYGRNLIGKGTKVNIEFV 128 + D + ++G GF+N+ +S + + L++ G+ + N GT V I++ Sbjct: 71 GGEGDVIREIEVSGPGFLNITVSDRAIIETLAARAGDDRLGVPFSPN---AGTTV-IDYA 126 Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 N MHVGH R AV+G + ++ F+G +V R ++I D G Q L Sbjct: 127 QPNVAKEMHVGHLRSAVIGAAMVEILEFTGEKVVRRHHIGDWGTQFGML 175 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 77/297 (25%), Positives = 121/297 (40%), Gaps = 50/297 (16%) Query: 323 PLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 PL+ KSD + Y A DL+ + + +IYV+ + S + K + A Sbjct: 320 PLIVQKSDSGFGYAATDLSAIRDRVGGLKASTLIYVVDARQSLHFKMVFETARRAGWLNE 379 Query: 380 QIN-VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---------------------- 416 + V L L +DG P K R G+ + L ++DE Sbjct: 380 DVQAVQLAFGTVLGKDGKPFKT--REGETVRLVDLLDEAVDRATAVVREKAGKVGLSEAE 437 Query: 417 -------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 VG +V++ L + FD ++ + + V Y+QYAYAR RSI R+A Sbjct: 438 IVENGRFVGIGAVKYADLSTSAARDYKFDLDQMVSLNGDTSV-YLQYAYARIRSILRKAA 496 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 + D P V E E +E L +HL ++ +I A P+KLA YLY L+ Sbjct: 497 EAG-----DRTP--VAHPELELAPAERALGLHLDQFGELIAEAAAEHAPHKLAAYLYQLS 549 Query: 530 SVFHGHWSHGRE-NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 S+F + P V N RL L A + G++++G+ +P + Sbjct: 550 SLFTTFYDQCPVIKPEPELVVGEN------RLFLCDLTARTLTKGMSLLGIRTPERL 600 >gi|126649241|ref|XP_001388293.1| RIKEN cDNA 2610011N19 gen [Cryptosporidium parvum Iowa II] gi|126117131|gb|EAZ51231.1| RIKEN cDNA 2610011N19 gen [Cryptosporidium parvum Iowa II] Length = 616 Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 9/130 (6%) Query: 80 SVFIAGKGFINLYLSPSYLRKILSSI-------VVSGIEYGRNLIGKGTKVNIEFVSANP 132 S+ +A +GFI + LS +++ LS + V +++ K KV ++F S N Sbjct: 84 SIEVAPQGFITIKLSDEFIQNNLSKLQEMDEVKVTPTMKFHCKSGRKTPKVIVDFSSPNI 143 Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN- 191 MHVGH R ++GDT ++ + G+EV R ++ D G Q L + Y + N Sbjct: 144 AKEMHVGHLRSTIIGDTTCRILEYLGFEVLRVNHVGDWGTQFGMLIEYLKEEYPTFVENL 203 Query: 192 -NDSDLPEGY 200 SDL E Y Sbjct: 204 PEISDLQEFY 213 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 18/141 (12%) Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE-SEF-----DTSELQLIV 500 K N Y+ YAYAR +IFR+ + I D VI Q+ S F + E +L + Sbjct: 484 KGNTAVYLLYAYARICAIFRKVEFIQSDNSM------VIKQKVSNFKLKISNNVERKLSI 537 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 L +P V + P +LA Y Y+L+ F ++ R + ++L RL Sbjct: 538 QLLRFPEVFDGILNDFFPNRLADYCYELSECFAQFYTE------CRIIGLEEQQLEQSRL 591 Query: 561 QLVHAVASIINSGLNIIGVES 581 L I+ GL+++GVE+ Sbjct: 592 LLCFLTKQILLKGLDLLGVET 612 >gi|320334541|ref|YP_004171252.1| arginyl-tRNA synthetase [Deinococcus maricopensis DSM 21211] gi|319755830|gb|ADV67587.1| Arginyl-tRNA synthetase [Deinococcus maricopensis DSM 21211] Length = 613 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 13/153 (8%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 VI+ G T AA +L++ L +P A + + I++ + G ++N + Sbjct: 25 VIQETPPGKPGDYGTPAAFLLAKSLRGNPAAFAAQLASTIELPSGIARAEAMGP-YLNFF 83 Query: 93 LS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 + +++R I+ + G K+ IE S NP +HVGH R V+GD++A Sbjct: 84 VDVGTFVRSIVEDTATPEAQSG--------KIVIEHTSVNPNKELHVGHVRNVVLGDSMA 135 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 + +GY V + YI+D G Q A S+F R Sbjct: 136 RIFRAAGYPVEVQNYIDDTGRQA---AESLFAR 165 Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 18/181 (9%) Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAK 469 + + +G ++RF M+ + + +DF + + + Q P YVQYA R +I ++A Sbjct: 445 QEIARRIGLGALRFAMMRNEPTRQIDFRWEQALTLQGDTAP--YVQYAAVRAGNILKKAA 502 Query: 470 D---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 + D Q ++ D + + ++ L P VI A P+ +A Y Sbjct: 503 AEGYVSDGAGADW------AQLTDLDLTLAKTVMRL---PEVIGTAVRVHSPHVVAAYAL 553 Query: 527 DLASVFHGHWSHGR--ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 DLA F+ W + + E V A+ RL LV + + L+++G++ P+ Sbjct: 554 DLAGAFN-SWYNAKTPEGKAATNVLASPAGQREARLALVRKLRATFEETLDLLGIQVPSA 612 Query: 585 M 585 M Sbjct: 613 M 613 >gi|255933225|ref|XP_002558083.1| Pc12g12720 [Penicillium chrysogenum Wisconsin 54-1255] gi|211582702|emb|CAP80899.1| Pc12g12720 [Penicillium chrysogenum Wisconsin 54-1255] Length = 646 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 111/533 (20%), Positives = 216/533 (40%), Gaps = 114/533 (21%) Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 K+ IEF S N P H GH R ++G LA++ G++V + Y+ D G Q LA Sbjct: 156 KIIIEFSSPNIAKPFHAGHLRSTIIGGFLANIYTVMGWDVIKMNYLGDWGKQYGLLANGF 215 Query: 182 -FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-----KYSSELLNFPEEKWLPIVKD 235 ++ ++AL + P + VY+K V +++++ K E + +EK + + Sbjct: 216 KYFGNEEALVKD----PINHLFDVYVK-VNRQVSEQEGPIKELKEQIKAKKEKSEDVAEL 270 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI------RDIIDNLARQGY---- 285 + A + + +D KA F S +D GDP + RD+ +Q Y Sbjct: 271 ETELAKLVDVSEDEKA----RRYFKSMED---GDPEALALWRKFRDLSIEKYKQTYARLN 323 Query: 286 ----VYEGILPPPKSKTTQKCDMDRKQLLFRSTM-------------------VGDDVDR 322 VY G +S+ + D +L+ ++ + +G + Sbjct: 324 IDFDVYSG-----ESQIKSESMTDAYKLMEQAGVSEKSEGAVIVDFTKHGAKKLGKAI-- 376 Query: 323 PLLKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381 +++ DG+ Y D+ A + E FD MIYV+ + ++ +L V + K Sbjct: 377 -IVRKDGTPLYLTRDIGAITERDNEYHFDKMIYVVAAQQDLHLAQLFKVTELMGHKDLAS 435 Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG--------SDSVRFMMLW--RKN 431 C+ + GM MS R G L ++ +VG + V++ + K Sbjct: 436 R---CQHINF---GMVRGMSTRKGTVKFLDDILRDVGDKMHEVMKKNEVKYSQVEDPEKT 489 Query: 432 SELLDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRSIFRQAK---DI 471 +++L V++ + + + Y+QYA+AR S+ R+++ + Sbjct: 490 ADILGITSVMVQDMTGKRVNGYDFNLDAMTSFEGDTGPYLQYAHARLCSMARKSELDVNE 549 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 + +FDL + + L+ LA++P V+ EP + YL+ + + Sbjct: 550 LVNANFDLLT----------EQHAVDLVRLLAQWPDVLLQTAKTLEPITVLSYLFKMTHM 599 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 + + V + + R+ L + ++++G+ ++G+ SP E Sbjct: 600 LSSSYD-------VLKVIGSEPDVKQARMALYASARQVLHNGMRVLGL-SPVE 644 >gi|21672518|ref|NP_660585.1| arginyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|22654287|sp|Q08888|SYR_BUCAP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|21623140|gb|AAM67796.1| arginyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 580 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 1/156 (0%) Query: 22 IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSV 81 IK+ + I + GH + M +S L + P + + I+ I+ + Sbjct: 16 IKINSNYTYEVFIISSKKIELGHYQVDNLMKISSRLKIKPYKLFQKILILIEKKKIYKKI 75 Query: 82 FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 + GFIN+++ +L + L +S G I + I++ S N MHVGH Sbjct: 76 IFSHPGFINIFIKNEWLSEKLEIPFISS-RLGVKYIYPKKNIVIDYSSPNIAKEMHVGHL 134 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 R ++GD ++ F G +V R +I D G Q L Sbjct: 135 RSTIIGDVTVRILEFLGQKVIRANHIGDWGTQFGIL 170 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 75/304 (24%), Positives = 130/304 (42%), Gaps = 48/304 (15%) Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEA 369 F++ M GD + + K D + Y D+A K +Y+ D +IY +D Y L++ Sbjct: 296 FKNRM-GDSMGVIIRKKDKGFLYSTTDIACLKYRYQNLHADRIIYY--TDSRQYQHLLQS 352 Query: 370 VAAAVSEKKAQINVLLCELV---------RLY--RDGMPIKMSK-------RAGDFIT-- 409 A N+LL + R + RDG IK+S RA + I Sbjct: 353 WTIAEKANYISKNLLLEHHMFGMMLSKNRRPFKTRDGNTIKLSNLLNESINRATNLIQKK 412 Query: 410 --------LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461 L + + +G +V++ L + + FD+ K+ + N Y+QYAY R Sbjct: 413 QPNLCKKKLIKLGEIIGISAVKYSDLSKNRNTNYIFDWDKM-LSFEGNTAPYIQYAYTRI 471 Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 SI +++ ++ +I E SE+ L + + E+ +I P+ + Sbjct: 472 ISILKKS-----NIPLHKIKMKIILNEE----SEINLAIKILEFEEIILLIAKNGTPHIM 522 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 YLY L++ F SH EN + F + K+ R++L A I GLN++G+++ Sbjct: 523 CKYLYQLSTYF----SHFYENCSILF--SEKIKIRKSRIKLSFLTAKTIKKGLNLLGIKT 576 Query: 582 PNEM 585 +M Sbjct: 577 IKKM 580 >gi|330861412|emb|CBX71641.1| hypothetical protein YEW_GQ28450 [Yersinia enterocolitica W22703] Length = 244 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 33/210 (15%) Query: 393 RDGMPIKMS-------KRAGDFIT----------LRHVVDEVGSDSVRFMMLWRKNSELL 435 R G +K+S +RAG I L+ VV+ VG +V++ L + + Sbjct: 51 RSGGTVKLSDLLDEAIERAGKLIAEKNPDMPADELKQVVEAVGIGAVKYADLSKSRTTDY 110 Query: 436 DFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE 495 FD+ + N Y+QYAY R S+F++A +L L VI ++ E Sbjct: 111 IFDWDNMLALDG-NTAPYMQYAYTRVVSVFKRAGVDESNLILPL----VITEDRE----- 160 Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555 L L ++ VI P+ + YLYDLA +F + H + + A++ + Sbjct: 161 AALATRLLQFEEVITTVAREGTPHVMCSYLYDLAGLFSSFYEH------CQILNADSEES 214 Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL+L A + GL+ +G+++ M Sbjct: 215 RQSRLKLAMLTAKTLKQGLDTLGIQTVERM 244 >gi|224008801|ref|XP_002293359.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220970759|gb|EED89095.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 553 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 116/535 (21%), Positives = 211/535 (39%), Gaps = 99/535 (18%) Query: 56 PLGLD-PLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI--- 110 P G++ P +A+ I+ + D P + + + G GFI + YL + ++ I+ +G Sbjct: 14 PEGVNSPQDVAKAIIDAVPSDNPVLCEMNVNGPGFIMSRIKREYLERGVNHIIKNGAPTK 73 Query: 111 --EYGRN-LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167 GRN G G V ++F S N MHVGH R ++G+++ ++++ G++V R ++ Sbjct: 74 PKSAGRNDASGGGGVVVVDFSSPNIAKEMHVGHLRSTIIGESVCRILSYVGHDVKRINHV 133 Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227 D G Q L Q L D G P + +L + Y + + F E Sbjct: 134 GDWGTQFGMLI--------QYLKEEYPDF-HGDIPNI------TDLTEFYKNAKMRFDES 178 Query: 228 KWLPIVKDYSV--------------QAMMKIIRDDLKALNIQHDIFISE--DDFHRGDPS 271 + +V Q + + R + + + + DI + E + F+ + Sbjct: 179 PEFKKISQLNVVKLQAGDEECRKIWQVLCDVSRKEFEKVYDRLDITVEECGESFYNDKIA 238 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 P +I+ +G V + KC K V L KSDG Y Sbjct: 239 P---VIEEFDSRGLV-------SVEEGGAKCVFVPKY----------KVPLMLQKSDGGY 278 Query: 332 TYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA---AAVSEKKAQINVLLCE 387 Y + D+A K + ++ ++Y+ + + + A A VSE +++ + Sbjct: 279 GYDSTDMAAIKYRLDQMKASQIVYITDFTQGDHFQMVFAAAKKIGWVSEDSHRLDHIGFG 338 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------------- 416 V+ DG K R+GD + L ++DE Sbjct: 339 TVQ-GEDGKRFKT--RSGDTVRLVDLLDEAVSRMETSLKERATDGKAAVDDAEIHATASA 395 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 +G +V++ L R + F + ++ + +K N Y+ YA+AR SI + K F +D Sbjct: 396 MGYGAVKYFDLRRNPTSNYIFSYDRMLD-TKGNTAIYLLYAHARLESIISKGKAEF-GVD 453 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 D + + SE L +HL + +E PY + ++Y L++ Sbjct: 454 VDELIKAGKAKIILAHKSERNLGLHLEFFADAVEETLNDLFPYHICDFVYALSNA 508 >gi|154339890|ref|XP_001565902.1| arginyl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134063220|emb|CAM45422.1| putative arginyl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 692 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 74/141 (52%), Gaps = 10/141 (7%) Query: 48 NAAMILSRPLGLDPLTIA---ELIVARIK---IDPDV-DSVFIAGKGFINLYLSPSYLRK 100 N AM L + L P +I +++ +K ++ D+ D KGFIN+ + ++ + Sbjct: 47 NNAMGLVKVLSQQPQSIKMSPQMVGEELKKNLVENDIIDEFEPTTKGFINISIRKEWVAQ 106 Query: 101 ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYE 160 +++ ++ GI R + K +V ++F S N MHVGH R ++G++++ L+ F ++ Sbjct: 107 MVNEVLNQGI---RPPVVKKQRVLVDFSSPNIAKEMHVGHLRSTIIGESISRLLEFCLHD 163 Query: 161 VTREYYINDAGAQINTLALSV 181 V+R +I D G L L + Sbjct: 164 VSRINHIGDWGTAFGMLILYI 184 >gi|325279315|ref|YP_004251857.1| Arginyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712] gi|324311124|gb|ADY31677.1| Arginyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712] Length = 596 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 73/302 (24%), Positives = 122/302 (40%), Gaps = 48/302 (15%) Query: 315 MVGDDVD-RPLLKSDGSYTYFAADLAYFKCKYER----GFDNMIYVMGSDHSGYVKRLEA 369 + GD +D + LL+ DG+ Y D+ YER D MIYV+G++ + + + L Sbjct: 312 LTGDGLDHKLLLRDDGTSVYMTQDIG---TAYERFNEFDMDEMIYVVGNEQNYHFQVLSL 368 Query: 370 VAAAV----SEKKAQINVLLCELVR---LYRDGMPIKMSKRAGDFI-TLRHVVDEVGS-- 419 + + ++K ++ + EL R+G + + I T R E+G Sbjct: 369 ICGKLGFPWADKIKHLSYGMVELPEGKMKSREGTVVDADDLMAEMIDTARETSQELGKLD 428 Query: 420 --DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF--------------YVQYAYARCRS 463 ++RK + L + +K K+ +F ++QY YAR +S Sbjct: 429 GYSEAEAEEVYRKVA-LGALKYFILKVDPKKTMMFNPKESIDFNGNTGPFIQYTYARIQS 487 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 + R+A D + Q SE E LI +A+ P V++ A P LA Sbjct: 488 VLRKA----ADAGASPLSADTHIQLSE---KEQNLIKLVAKLPDVVKEAGTTYSPALLAN 540 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 Y YDLA F+ + ++ N L RL L I + + ++G+E P Sbjct: 541 YAYDLAKEFNQFYHD------FSILKEENEALRNFRLLLAKQCGEAIKNAMGMLGIEMPE 594 Query: 584 EM 585 M Sbjct: 595 RM 596 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 KGF+N+ +S +Y +L+ V +YG G IE+ S N P+H+GH R + Sbjct: 81 KGFLNIEISAAYWVGVLNE-VAQDPKYGYVHENSGHSYMIEYSSPNTNKPLHLGHIRNNL 139 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQI 174 +G +++ + +G+EV +ND G I Sbjct: 140 LGWSVSEIQKANGHEVRMVNLVNDRGIHI 168 >gi|118575544|ref|YP_875287.1| arginyl-tRNA synthetase [Cenarchaeum symbiosum A] gi|118194065|gb|ABK76983.1| arginyl-tRNA synthetase [Cenarchaeum symbiosum A] Length = 607 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 80/326 (24%), Positives = 133/326 (40%), Gaps = 51/326 (15%) Query: 37 PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS 96 P G LS N +L++ G P IA+ + + K + G++N L Sbjct: 19 PSKPGFGDLSCNVPFLLAKSRGRAPFEIAQELAVQYKTGGVIAGAEAHPGGYLNFSLDWG 78 Query: 97 YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAF 156 I + +V G G V +E S NP +H+GH R V+GD++A +++ Sbjct: 79 ----IAAKEIVIEAAGGGPAPAGGGPVTVEHTSVNPNKALHIGHVRNIVIGDSVARILSR 134 Query: 157 SGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG--VYLKHVGKELA 214 GY+V+ YI+D+G Q+ + L + +PE PG + ++ G ++ Sbjct: 135 EGYKVSVLNYIDDSGLQVADIILGF----------TELGIPE-EPPGGKKFDQYCGDDVY 183 Query: 215 DKYSSELLNFP--EEKWLPIVKDY------SVQAMMKIIRDDLK-------ALNIQHDIF 259 K + P +EK I++ + +I R L L +Q+D Sbjct: 184 AKAAGACEEDPGLKEKRAVILRGLEDGTSETAHLADRITRRVLDGQLETCWGLGVQYDCL 243 Query: 260 ISEDDFHRGDPSPIRD-IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 E R S + D + + L + G+L K C +FRS G Sbjct: 244 NFESQIVR---SGLWDEVFERLKKM-----GLLELEKDGKNAGC------WVFRS---GT 286 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCK 344 D D+ +++SDG+ TY A D+ Y K Sbjct: 287 D-DKVVVRSDGTATYIAKDIPYAAWK 311 >gi|326800404|ref|YP_004318223.1| arginyl-tRNA synthetase [Sphingobacterium sp. 21] gi|326551168|gb|ADZ79553.1| Arginyl-tRNA synthetase [Sphingobacterium sp. 21] Length = 589 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 55/89 (61%), Gaps = 2/89 (2%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 KGF+NL L+ S+ ++L + +S ++G + G +V +E+ S N P+H+GH R + Sbjct: 78 KGFLNLSLTDSFWLQLLDT-EISKPDFGE-IPKNGKRVMVEYSSPNTNKPLHLGHVRNNL 135 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQI 174 +G ++A+++ +GYEV + +ND G I Sbjct: 136 LGFSVAAILEAAGYEVIKTNLVNDRGIHI 164 >gi|302558389|ref|ZP_07310731.1| arginine-tRNA ligase [Streptomyces griseoflavus Tu4000] gi|302476007|gb|EFL39100.1| arginine-tRNA ligase [Streptomyces griseoflavus Tu4000] Length = 324 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 3/121 (2%) Query: 12 KNYLKEIDCKI---KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68 + L+ + C + ++ + +R+ + P G +TN A+ L+RP G +AE++ Sbjct: 8 RTVLRAVRCAVDEGELRVAVPERVRVAPPGPGGCGDYATNVALQLARPAGRPAQHVAEVL 67 Query: 69 VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128 R+ DP V V I G GF+N+ L+ + ++ I+ SG YG KG V + V Sbjct: 68 RPRLLRDPGVGDVVITGPGFLNISLADAAPVALVREILRSGTSYGHGDALKGRTVRLRAV 127 Query: 129 S 129 S Sbjct: 128 S 128 Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust. Identities = 69/299 (23%), Positives = 112/299 (37%), Gaps = 36/299 (12%) Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353 P + Q + L R VGD V + G AD A E Sbjct: 55 PAGRPAQHVAEVLRPRLLRDPGVGDVV----ITGPGFLNISLADAAPVALVREILRSGTS 110 Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI---TL 410 Y G G RL AV SE +A ++ + V L G + + AG I Sbjct: 111 YGHGDALKGRTVRLRAV----SEARAVVHSDVVARV-LRSQGALVHLDDPAGVLIRPVPA 165 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 +G D+ R+ +L+ + + Q + NP+F V+YA+AR R++ R A Sbjct: 166 PADPAPLGPDAGRWALLYPAPHDRPRIGGEHLV-QRESNPLFRVRYAHARTRALLRNAG- 223 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA- 529 DL + P V E+ L+ LA++PRV+ A P +LA +L +A Sbjct: 224 ---DLGYGPEPGPVGEAEAR------SLLRVLADHPRVLAAAAAQHAPDRLARHLVAVAD 274 Query: 530 ---SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + G E P +++ GL+++G+++P+ + Sbjct: 275 ALPPLLPAVLPLGEEKPSAAHRARLALADAA---------GTVLAGGLSLLGIDAPDHL 324 >gi|146090829|ref|XP_001466367.1| arginyl-tRNA synthetase [Leishmania infantum JPCM5] gi|134070729|emb|CAM69084.1| putative arginyl-tRNA synthetase [Leishmania infantum JPCM5] Length = 692 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 64/127 (50%), Gaps = 3/127 (2%) Query: 55 RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR 114 +P+ + P + E + + + +D KGFIN+ + ++ +++ ++ GI R Sbjct: 61 QPIKMSPQMVGEELKKNLVGNDIIDEFEPTPKGFINVSIRKEWVARMVKEVLKQGI---R 117 Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 + +V ++F + N MHVGH R ++G++++ L+ F ++V R +I D G Sbjct: 118 PPVVTKQRVLVDFSAPNIAKEMHVGHLRSTIIGESISRLLEFCQHDVARINHIGDWGTAF 177 Query: 175 NTLALSV 181 L L + Sbjct: 178 GMLILYI 184 >gi|322500204|emb|CBZ35281.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 692 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/127 (24%), Positives = 64/127 (50%), Gaps = 3/127 (2%) Query: 55 RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR 114 +P+ + P + E + + + +D KGFIN+ + ++ +++ ++ GI R Sbjct: 61 QPIKMSPQMVGEELKKNLVGNDIIDEFEPTPKGFINVSIRKEWVARMVKEVLKQGI---R 117 Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 + +V ++F + N MHVGH R ++G++++ L+ F ++V R +I D G Sbjct: 118 PPVVTKQRVLVDFSAPNIAKEMHVGHLRSTIIGESISRLLEFCQHDVARINHIGDWGTAF 177 Query: 175 NTLALSV 181 L L + Sbjct: 178 GMLILYI 184 >gi|311244159|ref|XP_003121335.1| PREDICTED: probable arginyl-tRNA synthetase, mitochondrial-like [Sus scrofa] Length = 225 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 87/177 (49%), Gaps = 16/177 (9%) Query: 27 KILDRIVIERPRDCAHGHLSTNAAMI----LSRP-LGLDPLTIAELIVARIKIDPDVDSV 81 K + + I R + A LS ++ + SRP + + + +AE ++K D V + Sbjct: 26 KSISAVPISRKEEVADFQLSVDSLLENNNDHSRPDIQIQAMRLAE----KLKCDTVVSEI 81 Query: 82 FIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYG-RNLIGKG---TKVNIEFVSANPTGPM 136 G+G +N ++ L K +L ++ G +YG ++ + G K+ +EF S N Sbjct: 82 -STGQGTVNFKINRELLTKTVLQQVIEDGSKYGLKSELFSGLPQKKIVVEFSSPNVAKKF 140 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNN 192 HVGH R ++G+ +A+L G++VTR Y+ D G Q L + Y++ L +N Sbjct: 141 HVGHLRSTIIGNFIANLKEALGHQVTRINYLGDWGMQFGLLGTGFQLFGYEEKLQSN 197 >gi|8250401|emb|CAB93578.1| putative arginyl-tRNA synthase [Lactococcus lactis] Length = 262 Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 70/288 (24%), Positives = 119/288 (41%), Gaps = 57/288 (19%) Query: 329 GSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV--AAAVSEKKAQINV 383 G+ Y DLA Y K + F +YV+G + + + K+L+AV A ++V Sbjct: 1 GATLYITRDLATAAYRKKTF--NFVKSLYVVGGEQTNHFKQLKAVLKEAGYDWSDDMVHV 58 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------VG 418 + + + K S R G + L +DE VG Sbjct: 59 PFGMVTQGGK-----KFSTRKGHVVKLEMALDEAVDRAEKQIEAKNPNLENKEEVAKQVG 113 Query: 419 SDSVRFMMLWRKNSELLDFDFCK-VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 +V+F L + DFD + V + + P YVQYA+AR +SI R+A + Sbjct: 114 VGAVKFYDLKTDRNNGYDFDLDEMVSFEGETGP--YVQYAHARIQSILRKANRKVNIDNI 171 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 L D +++ L E+P +++ A EP +A Y LA F+ +++ Sbjct: 172 SLVVS---------DAEAWEIVKALKEFPNIVKRAADNYEPSIIAKYAISLAQAFNKYYA 222 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H R + ++ +L RL L+ A + ++ L ++GV +P M Sbjct: 223 HVR-------ILEDDAQLD-GRLALISATSIVLKEALRLLGVAAPENM 262 >gi|41207537|gb|AAR99638.1| ArgS [Lactococcus lactis subsp. cremoris MG1363] Length = 204 Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 5/154 (3%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +IE+P+ G L+ A L++ L P IA I KID IA ++N + Sbjct: 27 IIEKPKSSDLGDLAF-PAFQLAKTLRKSPQIIAGEIAE--KIDTKGFEKVIAVGPYVNFF 83 Query: 93 LSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLA 151 L + +++ ++ G YG IG+G V I+ + N P +GH R V+GD++A Sbjct: 84 LDKNATASEVIREVLAEGEHYGDANIGEGGNVPIDMSAPNIAKPFSIGHLRSTVIGDSIA 143 Query: 152 SLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 + GY+ + ++ D G Q L ++ + +Y Sbjct: 144 KIYEKLGYQPIKINHLGDWGKQFGLL-ITAYKKY 176 >gi|119568972|gb|EAW48587.1| arginyl-tRNA synthetase-like, isoform CRA_d [Homo sapiens] Length = 359 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 82/331 (24%), Positives = 147/331 (44%), Gaps = 51/331 (15%) Query: 54 SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEY 112 SRP D A+ + +++ D V + G+ +N ++ L K +L ++ G +Y Sbjct: 57 SRP---DIQVQAKRLAEKLRCDTVVSEI-STGQRTVNFKINRELLTKTVLQQVIEDGSKY 112 Query: 113 G-RNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168 G ++ + G K+ +EF S N HVGH R ++G+ +A+L G++V R Y+ Sbjct: 113 GLKSELFSGLPQKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVIRINYLG 172 Query: 169 DAGAQINTLALSV-FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS-------- 219 D G Q L + Y++ L +N P + VY++ V KE AD S Sbjct: 173 DWGMQFGLLGTGFQLFGYEEKLQSN----PLQHLFEVYVQ-VNKEAADDKSVAKAAQEFF 227 Query: 220 ELLNFPEEKWLPI---VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276 + L + + L + +D S++ +++ K L + D + S + F+R +++ Sbjct: 228 QRLELGDVQALSLWQKFRDLSIEEYIRV----YKRLGVYFDEY-SGESFYR---EKSQEV 279 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD-RPLLKSDGSYTYFA 335 + L +G + + I K T D+ GD +++SDG+ Y Sbjct: 280 LKLLESKGLLLKTI------KGTAVVDLSGN---------GDPSSICTVMRSDGTSLYAT 324 Query: 336 ADLAYFKCKYER-GFDNMIYVMGSDHSGYVK 365 DLA + ++ FD MIYV+ S + K Sbjct: 325 RDLAAAIDRMDKYNFDTMIYVIKDKKSIFSK 355 >gi|195137498|ref|XP_002012565.1| GI21379 [Drosophila mojavensis] gi|193918548|gb|EDW17415.1| GI21379 [Drosophila mojavensis] Length = 212 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 14/167 (8%) Query: 43 GHLSTNAAMILSRPL---GL--DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 G N AM L++ + G+ P IA+ I + P ++ V ++ GFIN+++S Sbjct: 45 GDYQCNNAMGLAKKMKEQGIIKTPRDIAQDIQKCVPESPIIEKVEVSSAGFINIFISKKL 104 Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 L++++ GI+ + + K +V ++F S N MHVGH R ++G+++ L+ F Sbjct: 105 AVLSLTNMLRYGIQPPK--VSK-KRVLVDFSSPNIAKQMHVGHLRSTIIGESICRLLEFL 161 Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDS----DLPEGY 200 ++V R ++ D G Q L + R+ + N+S DL E Y Sbjct: 162 QHDVIRINHLGDWGTQFGMLIAHLEDRFPN--FQNESPPIGDLQEFY 206 >gi|320008558|gb|ADW03408.1| DALR anticodon binding domain protein [Streptomyces flavogriseus ATCC 33331] Length = 370 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 16/177 (9%) Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 T +++ +G+D+ R+ +L + D + Q + NP+F V+YA++R R++ R+A Sbjct: 210 TAAELLERLGADATRWGLLRPAGHDRADLGEALLV-QGEANPLFLVRYAHSRARALSREA 268 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 + + +D D L LA++P V+ +A Q P +LA +L + Sbjct: 269 ERLGFTAGYDQ------------DVDAPSLHAALADHPGVLASAARHQAPDRLARHLETV 316 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A F + P L RL L A +++ GL+++G+ +P + Sbjct: 317 AHAF---FDLHDTCPPLPVGDEKPSAAHRSRLALAEAAGTVLAGGLSLLGISAPEHL 370 Score = 40.4 bits (93), Expect = 0.84, Method: Compositional matrix adjust. Identities = 38/158 (24%), Positives = 64/158 (40%), Gaps = 15/158 (9%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 AD S + + ++ + + + R+ +ER R G + A+ L+ P L + Sbjct: 21 ADLSRTVLHAVRRAVDEDALRAPVPARVRVERTRPGGSGDYACAVALQLAGPAALPAREV 80 Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 A L+ R+ P + V I G GF+N L +S +G R ++ +G + Sbjct: 81 AALLRDRVAGTPGIGRVEITGPGFLNFTLD--------ASAGATGAACVRQVLEQGLRYG 132 Query: 125 IEFVSANPTGPMHVGH----CRCAVVGDTLASLMAFSG 158 A G +H H R AVV T+ L+ G Sbjct: 133 W---GAECAGQLHQLHHRREVRAAVVAGTVMKLLRAQG 167 >gi|76800033|ref|ZP_00781958.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) (ArgRS) [Streptococcus agalactiae 18RS21] gi|76584650|gb|EAO61447.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) (ArgRS) [Streptococcus agalactiae 18RS21] Length = 244 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 3/129 (2%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIE 111 +++ L P IA I +IK D + V G ++N +L + + ++L ++ G Sbjct: 1 MAKTLRKAPQIIASDIAEQIKSD-QFEKVEAVGP-YVNFFLDKAAISSQVLKQVLSDGSA 58 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 Y IG+G V I+ S N P +GH R V+GD+LA++ GY + ++ D G Sbjct: 59 YATQNIGEGRNVAIDMSSPNIAKPFSIGHLRSTVIGDSLANIFDKIGYHPVKINHLGDWG 118 Query: 172 AQINTLALS 180 Q L ++ Sbjct: 119 KQFGMLIVA 127 >gi|289449921|ref|YP_003475106.1| arginine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184468|gb|ADC90893.1| arginine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 578 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 133/581 (22%), Positives = 220/581 (37%), Gaps = 113/581 (19%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGK 119 P+ EL P++ + G G++N +L+ SY+++ + ++ Sbjct: 55 PVIATELAGGIAGKLPELTEIRQTG-GYLNFFLNRSSYIKETIGKVLTDPHAVFPTADLH 113 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 V +EF S N P H+GH ++G +A++ +GY V + ++ D G Q L + Sbjct: 114 DKTVLVEFSSPNIAKPFHIGHAFTTILGQVIANMYQTAGYNVVKLNHLGDYGTQFGKLIV 173 Query: 180 SV-FWRYQQALYNNDSDLPEGYYPGVYLK--HVGKELADKYSSELLNF-------PEEKW 229 + W +AL + P +Y+K KE + + F PEEK Sbjct: 174 AYRLWGDAKALETD----PIKELLRIYVKFHKEAKEKPELENQARFAFKCLEEGRPEEK- 228 Query: 230 LPIVKDYSVQAMMKIIRD-DLKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGY 285 AM + RD L N +D + D + G+ I +++ L ++G Sbjct: 229 ----------AMWQKFRDLSLVEFNRVYDRLGIKFDNYNGESFYSDKIPAVVEMLRQKGL 278 Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLA--- 339 + E S Q + DD+ P +LKSDG+ Y + DLA Sbjct: 279 MVE-------SDGAQVVQL-------------DDLKLPPCIILKSDGTTIYASRDLAAIL 318 Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL-LCELVRLYRDGMPI 398 Y + F IYV+G+ + + +++ AV KKA + CE V P Sbjct: 319 YRDATWH--FYKNIYVVGTPQALHFRQVFAVL-----KKAGYDCADRCEHVGFGLVKFPE 371 Query: 399 -KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN--------SELLDFDFCK-------- 441 KMS R GD I L ++ E + + + RKN SE D + Sbjct: 372 GKMSTREGDVIFLEDLLSEAVAKTFEII---RKNAAERYEDMSEAEQADIAEKVGLGAVT 428 Query: 442 ---VKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 ++ + + VF Y+QY YAR S+ R+A + Sbjct: 429 YAFLRNGRERDIVFSWEEMLNFEGDTAPYLQYTYARAHSMLRKAGVVNAKEQL----LAA 484 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 + S + SE L + NA EP LA + +A F+ ++ E P Sbjct: 485 VAAGSLNEESEFNLCRQIEALAAAFNNALKNNEPSILAKQINAVAHAFNKFYT---ECPI 541 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L+ +L RL L A + GL+I+ ++ M Sbjct: 542 LK----AEGELRTSRLALAMATCFALKQGLSILNIQVVERM 578 >gi|254387532|ref|ZP_05002771.1| arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|294815080|ref|ZP_06773723.1| arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|326443443|ref|ZP_08218177.1| arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|197701258|gb|EDY47070.1| arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] gi|294327679|gb|EFG09322.1| arginyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064] Length = 335 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 48/95 (50%) Query: 24 VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFI 83 +E + D + +ERPR G +T A+ L+ P G P +AE++ RI P + +V I Sbjct: 23 LEVPVPDTVTVERPRPGGRGDWATTIALRLAGPAGKAPRAVAEILRERIAGTPGIAAVEI 82 Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 G GF+NL L ++ ++ G YG + G Sbjct: 83 TGPGFLNLSLVDGSQAALVRRVLEQGPAYGHRVTG 117 Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 26/145 (17%) Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 Q + NP+F V+YA+AR R++ R A L F P + DT+ LI + Sbjct: 213 QHESNPLFTVRYAHARSRALTRNAA----ALGFRGEPLEHV------DTALDGLI---GD 259 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVF----HGHWSHGRENPRLRFVQANNRKLTMMRL 560 YP V+ +A P +LA +L A H G E P A +R RL Sbjct: 260 YPDVLASAARLHAPDRLARHLEATADALLAFQHTVLPRGEEKP-----SAAHRS----RL 310 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 L A +++ GL+++GV +P+ + Sbjct: 311 ALAEAAGTVLAGGLSLLGVSAPDHL 335 >gi|260061933|ref|YP_003195013.1| arginyl-tRNA synthetase [Robiginitalea biformata HTCC2501] gi|88786067|gb|EAR17236.1| arginyl-tRNA synthetase [Robiginitalea biformata HTCC2501] Length = 594 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 23/145 (15%) Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 Q P ++QY YAR RSI R+A D + D DL ++ +E QL+ L E Sbjct: 469 QGNTGP--FIQYTYARIRSILRKAGDGYAVPDKDLLSLSLHEKEK-------QLLKDLLE 519 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH----GRENPRLRFVQANNRKLTMMRL 560 +P V+ A P +A Y YDL F+ + G E+ V N R+ Sbjct: 520 FPEVVLQAAEQYSPALVANYTYDLVKNFNSLYQQVSILGEEDA----VHRN------FRV 569 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 QL V ++ G ++G+E P M Sbjct: 570 QLTGEVGRVVARGCKLLGIEVPERM 594 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 62/120 (51%), Gaps = 1/120 (0%) Query: 55 RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR 114 R + +P I E I A + + + S + KGF+NL + ++ + + + +YG Sbjct: 48 RQVKGNPAAIGEAIGAYLAENLEEVSGYNVIKGFLNLVIDDAWYLEFFTRMRADA-DYGL 106 Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 + + + +E+ S N P+H+GH R ++G +++ ++ +GY+V + IND G I Sbjct: 107 HTGARRGSILVEYSSPNTNKPLHLGHIRNNLLGYSVSEILKAAGYKVYKTQIINDRGIHI 166 >gi|207111174|ref|ZP_03245336.1| arginyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1] Length = 62 Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 42/61 (68%) Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463 AG+FI ++ V+D+VG D++RF+ L ++ L+FD +K+Q NP++Y+ YA +R + Sbjct: 2 AGNFILIKDVIDDVGKDALRFIFLSKRLDTHLEFDVNTLKKQDSSNPIYYIHYANSRIHT 61 Query: 464 I 464 + Sbjct: 62 M 62 >gi|167957303|ref|ZP_02544377.1| arginyl-tRNA synthetase [candidate division TM7 single-cell isolate TM7c] Length = 371 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 71/290 (24%), Positives = 131/290 (45%), Gaps = 54/290 (18%) Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVS-EKK 378 D +LKSDG+ Y D+A K K R D + +V+G + S +K++ A+ + K Sbjct: 101 DTIVLKSDGTSLYITQDIALTKLKKNRFKADKLFWVIGPEQSLAMKQVFAICEQLGIGKL 160 Query: 379 AQINVLLCELVRLY--RDGMPIKMSKRAGDFITLRHVVDEV------------------- 417 + L L+ + + G KMS R G+ + + +++DEV Sbjct: 161 SDFTHLPYGLISIVDKQTGAKKKMSSRDGNTLYIDNLLDEVRDSLLNSGRDYDEKTADLI 220 Query: 418 GSDSVRFMML--WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 D+V+F +L R + +LD + K + Y+ Y +R S+ + DL Sbjct: 221 AIDAVKFAVLKPSRNSDSVLDI---QESINLKGDSGIYILYTLSRINSLLSKYT---GDL 274 Query: 476 DFDLFPRNVIPQESEFDTS--ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 +PQ E S E ++++ +A +P+ I +A + P L Y+ D+A VF+ Sbjct: 275 --------TLPQSEELALSSEERKIVMLMAYFPKRITDALESYAPNILIEYILDIAHVFN 326 Query: 534 GHWSHGRENPRLRFVQ---ANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 ++ + +F+ AN RK +L L ++A +I + L ++G++ Sbjct: 327 SIYA------KEQFISEDVANTRK----KLYLSKSIAIVITNALKLLGIK 366 >gi|328479565|gb|EGF48791.1| arginyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462] Length = 131 Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats. Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 2/95 (2%) Query: 87 GFINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 G++N YL S+ ++L +IV SG +G +G+G V I+ S N PM +GH R V Sbjct: 10 GYVNFYLDKISFAHEVLKAIVQSGEHFGDAKLGEGN-VPIDMSSPNIAKPMSMGHLRSTV 68 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +G+ LA+++ GY + ++ D G Q L ++ Sbjct: 69 IGNALANILQKVGYSPIKINHLGDWGTQFGKLIVA 103 >gi|255036439|ref|YP_003087060.1| arginyl-tRNA synthetase [Dyadobacter fermentans DSM 18053] gi|254949195|gb|ACT93895.1| arginyl-tRNA synthetase [Dyadobacter fermentans DSM 18053] Length = 592 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 5/162 (3%) Query: 15 LKEIDCKIKVEK--KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72 LKE D + V+K ++ + VI +P T L++ P I ++I + Sbjct: 7 LKE-DIQKAVQKHFQLESQEVILQPTKKEFEGFYTFVTFPLTKAARKAPAEIGQIIGDEL 65 Query: 73 KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP 132 + + F +GF+N+ L S + I S +G L G V +EF S N Sbjct: 66 VASSSLVAGFNVVQGFLNISLKDSTWLDLFGGIH-SDEAFG-TLPSNGKSVMVEFSSPNT 123 Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 P+H+GH R +GD+L+ ++ SGY+V + +ND G I Sbjct: 124 NKPLHLGHLRNNFLGDSLSKILKASGYDVVKTCLVNDRGIHI 165 Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust. Identities = 32/138 (23%), Positives = 63/138 (45%), Gaps = 23/138 (16%) Query: 453 YVQYAYARCRSIFRQAKDI-----FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 ++QY YAR RSI R+A+ P +++ + +E +L+ L++YP Sbjct: 473 FIQYTYARIRSIMRKAEQAGIAAEVPGVNYAM------------HQAERELVFSLSQYPV 520 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 + A P ++ Y ++LA V++ ++ + + + +R+ L AVA Sbjct: 521 KVLAAANEFAPSLISQYAFELAKVYNQFYAE------VSIFSDPDPEAVKLRVALSSAVA 574 Query: 568 SIINSGLNIIGVESPNEM 585 I L ++G++ P M Sbjct: 575 ETIRKALGLLGIDVPERM 592 >gi|301608810|ref|XP_002933968.1| PREDICTED: LOW QUALITY PROTEIN: probable arginyl-tRNA synthetase, mitochondrial-like [Xenopus (Silurana) tropicalis] Length = 573 Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 123/539 (22%), Positives = 197/539 (36%), Gaps = 114/539 (21%) Query: 99 RKILSSIVVSGIEYGRN---LIG-KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLM 154 R +L I G YG N G G K +E+ S N HVGH R ++G+ +A+L Sbjct: 97 RTVLQQISKDGSIYGLNTELFSGLSGRKTVVEYSSPNIAKKFHVGHLRSTIIGNFIANLK 156 Query: 155 AFSGYEVTREYYINDAGAQINTL--ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 G EV R Y+ D G Q L S F ++ + N P + VY+K Sbjct: 157 QAVGNEVIRINYLGDWGLQFGLLGAGFSKFGSEEELVVN-----PLQHLFEVYVKVNTAA 211 Query: 213 LADK----YSSELLNFPE-------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 DK + E L E W+ +D S+Q K+ K L D + Sbjct: 212 EEDKDIKLSAQEFLRRLEGGDPHALSLWMHF-RDLSIQEYAKV----YKRLGAHFDDYSG 266 Query: 262 EDDFHRGDPSPIRDIIDNLARQG-----YVYEGILPPPKSKTT--QKCDMDRKQLLFRST 314 E + ++ + N Q +++ K+ TT QKC L+FR Sbjct: 267 ESFYKEKSQEVLKQLESNGLLQKTEXGLFIWLKTFANVKTYTTCFQKC----LSLIFR-- 320 Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAA 373 D+A + ER FD MIYV + ++L + Sbjct: 321 ----------------------DVAAALDRLERYSFDEMIYVTDKSQKNHFQQLFKILKI 358 Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE 433 + + +A + + G+ M R G+ + L V+DE S ++ M + + Sbjct: 359 LGKDQA-------DRFQHVPFGLVKGMKTRRGEVVFLEDVLDEARSRMLQNMAASGTSKQ 411 Query: 434 LLD---------------------------FDFCKVKEQSKENPVFYVQYAYARCRSIFR 466 L D FD+ + + + + VF +QY +AR S+ Sbjct: 412 LEDPSDTAEKIGIAALIVQDFKGQLLSDYHFDWDQALQSTGDTGVF-LQYTHARLHSL-- 468 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 QA D D I S + + + HL Y VI +P L YL Sbjct: 469 QALWCSRDTD-------DIDIASLREPCVIATLQHLLRYDEVIYKCLEDLQPRYLVTYLM 521 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L GH ++ R V+ ++ + RL + V +++SG+ ++G+ N M Sbjct: 522 SL-----GHLANVAH--RALHVKRSSSEAAHARLFFFNNVRMVLSSGMKLLGISPVNNM 573 >gi|551762|gb|AAA72384.1| arginyl-tRNA synthetase [Buchnera aphidicola] Length = 158 Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats. Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 2/125 (1%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 GH N + ++ L P +A I+ IK + + GFIN ++P ++ + L Sbjct: 36 GHYQLNNLIKIANISNLKPFELANRIILNIKKKYMYKEITFSQPGFINFLINPYWISEQL 95 Query: 103 SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 I +S G N + + I++ S N MH+GH R ++GD +A ++ F G+ V Sbjct: 96 EKIFLSP-RLGINHV-NAQNIVIDYSSPNIAKEMHIGHLRSTIIGDVMARILDFLGHNVI 153 Query: 163 REYYI 167 R +I Sbjct: 154 RANHI 158 >gi|332521375|ref|ZP_08397831.1| arginyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4] gi|332043103|gb|EGI79301.1| arginyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4] Length = 595 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 12/133 (9%) Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 ++QY YAR +SI R+AK N I + E LI L +P VI+NA Sbjct: 475 FIQYTYARIQSILRKAKA------NGTVSLNAIESSFKLHEKEKTLIKQLQVFPEVIQNA 528 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572 P +A Y Y+L F+ + + + + A+N+ R+QL AV++ I + Sbjct: 529 AENHSPALVANYTYELVKDFNSFYQN------VSILGADNQTDKNFRIQLSQAVSNTIKN 582 Query: 573 GLNIIGVESPNEM 585 ++G+ P M Sbjct: 583 AFILLGITVPERM 595 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 1/120 (0%) Query: 55 RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR 114 R + +P+ I E I + + +V F KGF+N+ + +Y + I ++G Sbjct: 48 RVVKGNPVQIGETIGQYLIENVEVVKAFNVVKGFLNIEIEDAYYISFFNEIKADN-KFGY 106 Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 + V +E+ S N P+H+GH R ++G +++ ++ SG +V + IND G I Sbjct: 107 KTPDSTSAVMVEYSSPNTNKPLHLGHVRNVLLGYSVSEIIKASGKKVYKTQIINDRGIHI 166 >gi|156741625|ref|YP_001431754.1| arginyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941] gi|156232953|gb|ABU57736.1| arginyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941] Length = 640 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 69/292 (23%), Positives = 123/292 (42%), Gaps = 48/292 (16%) Query: 324 LLKSDGSYTYFAADLAYFKCKYERGF--DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381 L +SD Y DLA + ER F +IYV+ S + ++L A+A A+ + + Sbjct: 367 LRRSDSGTLYHTRDLACIVYR-EREFRPAKIIYVVDSRQELHFRQLFALARAMGYAQ-ET 424 Query: 382 NVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDE------------------------ 416 ++ + ++ + G P +S RAG+ + L ++DE Sbjct: 425 ELIHVKFGTIFDQQGRP--LSTRAGNMVYLADLLDEAHARARAVVDQASPELPEVEKEAI 482 Query: 417 ---VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 VG +V + L++ + D+ ++ + N Y+QY +ARC SI R+A D Sbjct: 483 AEAVGVGAVVYNDLYQDPRRDIRLDWERML-AIEGNSAPYIQYMHARCCSILRKAADEGV 541 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 D + P E+ +I LA+ P + A P+ +A + Y+ A Sbjct: 542 DAEQGDAALLTHPAET-------AVIKQLAKLPGAVREAGERYAPFVIAEWCYETARALS 594 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++A L RL+LV A A + +GL ++G+++P M Sbjct: 595 AFYRD------CSVLKAETPALRTARLRLVAATAQALRNGLALLGIKAPERM 640 Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 2/104 (1%) Query: 82 FIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140 +A F+N L + L +L + G YG + G G + I++ S N MHVGH Sbjct: 104 IVATGPFVNFSLDAARLAAAVLDEVERLGARYGSDDQGAGKTIVIDYSSPNVAKTMHVGH 163 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN-TLALSVFW 183 R ++G +L + F GY V + ++ D G Q +A V W Sbjct: 164 IRSTIIGQSLYHIFDFLGYRVIGDNHLGDWGKQFGMNIAAIVRW 207 >gi|124002391|ref|ZP_01687244.1| arginyl-tRNA synthetase [Microscilla marina ATCC 23134] gi|123992220|gb|EAY31588.1| arginyl-tRNA synthetase [Microscilla marina ATCC 23134] Length = 701 Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 83/309 (26%), Positives = 121/309 (39%), Gaps = 66/309 (21%) Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEK 377 D D+ LL+S+G+ Y DL KYE + IYV+G++ + K L + Sbjct: 417 DNDKILLRSNGTSVYMTQDLGTADKKYEDHTINKSIYVIGNEQDYHCKVLFQI------- 469 Query: 378 KAQINVLLCELVRLYRDGM----------PI-KMSKRAGDFI-----------TLRHVVD 415 L +L R Y DG+ P KM R G I T R D Sbjct: 470 -------LKDLDRPYADGLYHLSYGMVDLPTGKMKSREGTVIDADDLLAEVKETARKRTD 522 Query: 416 EVG-----SDS-----VRFMMLWRKNSELLDFDFCKVKEQSKENPVFY-------VQYAY 458 ++G SD+ R + L LL D K KE+ V + VQ Y Sbjct: 523 DLGKLDGMSDAEKIEIYRIIALGALKYTLLRVDPKKRMLFDKESSVDFQGDAGPFVQMNY 582 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 R RSI R+A ++ + P V S+ E +LI L +Y V+E A P Sbjct: 583 VRTRSILRKAAEMGISTNE---PWTV----SDLHAMEKELIKLLLQYEAVVEEAGNEYNP 635 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT--MMRLQLVHAVASIINSGLNI 576 +A Y YDLA + ++ E P L+ + + R+ L +I L + Sbjct: 636 SFVAQYAYDLARTYSQFFA---ECPILKMDDGSAASIERRKFRIALSTKTGELIKKALGL 692 Query: 577 IGVESPNEM 585 +G+E P M Sbjct: 693 LGIEVPERM 701 Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 2/92 (2%) Query: 83 IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 +A KGF+N+ ++ +I S +YG+ L K KV +E+ S N P+H+GH R Sbjct: 75 VANKGFLNISIANKVWIDTFGNIAQSS-DYGK-LPHKNQKVMVEYSSPNTNKPLHLGHLR 132 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 +G ++A ++ +GY+V + +ND G I Sbjct: 133 NNFLGYSVARILEAAGYDVVKANLVNDRGVHI 164 >gi|150025554|ref|YP_001296380.1| arginyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86] gi|166232786|sp|A6GZP8|SYR_FLAPJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|149772095|emb|CAL43571.1| Arginine--tRNA ligase [Flavobacterium psychrophilum JIP02/86] Length = 601 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 19/134 (14%) Query: 453 YVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511 ++QY YAR +SI R+A DI + L P+ E +LI + YP VI++ Sbjct: 486 FIQYTYARIQSILRKANFDITVTISTKLHPK------------EKELIKQIEMYPEVIQH 533 Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571 A P +A Y+YDL ++ + + + + N++K+ R+QL VA I Sbjct: 534 AAANHSPALIANYIYDLVKEYNSFY----QTVSILGEEDNDKKV--FRVQLSKKVADTIK 587 Query: 572 SGLNIIGVESPNEM 585 + ++G++ P M Sbjct: 588 TAFTLLGIDVPERM 601 Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 14/95 (14%) Query: 87 GFINLYLSPSYLRKILSSI-------VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139 GF+N+ ++ Y ++I VS E+ + ++ +E+ S N P+H+G Sbjct: 90 GFLNIVIANDYYINFFNTIKTDAQFGFVSPSEHDKAIM-------VEYSSPNTNKPLHLG 142 Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 H R ++G ++A ++ SG +V + IND G I Sbjct: 143 HVRNNLLGYSVAEIIKASGKKVYKTQIINDRGIHI 177 >gi|120437133|ref|YP_862819.1| arginyl-tRNA synthetase [Gramella forsetii KT0803] gi|117579283|emb|CAL67752.1| arginyl-tRNA synthetase [Gramella forsetii KT0803] Length = 623 Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 15/133 (11%) Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 ++QY YAR +SI R+A +FD + +E F E +LI + +P I A Sbjct: 506 FIQYTYARIQSILRKA-------EFDTSAE--LSKEFSFHEKEKELIKQVQLFPETIALA 556 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572 P +A Y Y+L F+ + + ++ + ++ + R+QL VA++I S Sbjct: 557 AENHSPALIANYTYELVKSFNSFYQN------VQILGIDDEAEKVFRVQLSGLVANVIKS 610 Query: 573 GLNIIGVESPNEM 585 G ++G+E P M Sbjct: 611 GFKLLGIEVPERM 623 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 31/121 (25%), Positives = 60/121 (49%), Gaps = 2/121 (1%) Query: 55 RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR 114 + L P +AE I ++ + + + F +GF+N+ +S Y + V ++G Sbjct: 79 KQLRTSPAQLAEKIGKYLEDEVEEVASFNVIQGFLNIVISDQYYINFFND-VKDREDFGI 137 Query: 115 NL-IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173 L + + +E+ S N P+H+GH R ++G +++ ++ +G EV + IND G Sbjct: 138 LLPQSDASGIMVEYSSPNTNKPLHLGHIRNNLLGYSVSEILKAAGNEVYKVQVINDRGIH 197 Query: 174 I 174 I Sbjct: 198 I 198 >gi|300175973|emb|CBK22190.2| unnamed protein product [Blastocystis hominis] Length = 449 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 106/483 (21%), Positives = 192/483 (39%), Gaps = 81/483 (16%) Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195 MHVGH R ++GD L+ ++ + ++V R +I D G Q L Y + + Sbjct: 1 MHVGHLRSTLLGDCLSRVLEYCKHDVIRINHIGDWGTQFGMLLC----------YLKEIN 50 Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQ 255 G + ++L Y + + F E+ P + +S Q ++ + + + L++ Sbjct: 51 SSNGNSLSI------EDLTALYRAAKVRFDED---PTFRLHSHQEVVNLQKGEPWELSVW 101 Query: 256 HDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLF---- 311 + ++ + I L QG + P K +++ K LL Sbjct: 102 KQLCALSCQMYQTIYQRL-GIDPRLKTQGESFYNPFLPELVK-----ELESKNLLTDQEG 155 Query: 312 RSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRL- 367 M + D PL+ K DG + Y + DL K + D +IYV+ S S + ++L Sbjct: 156 SKVMFVPNFDVPLIIQKKDGGFGYDSTDLMALKYRTLVTKADWIIYVVDSGQSLHFQQLF 215 Query: 368 EAVAAAVSEKKAQINVLLCELVR-------LYRDGMPIKMS-------KRAGDFITLR-- 411 EA A +K +++ + LV+ R G ++++ +RA + R Sbjct: 216 EAGRKAGWAQKTRLDHVAFGLVQGKDKKKFKTRSGKNVRLTDLLDEACERATAILRQRVE 275 Query: 412 -------------HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV-FYVQYA 457 ++G V++ L + + L D+ F + S E Y+QY Sbjct: 276 SGLSNLSEEEAIVQTATQLGIGGVKYFDL--RQNRLSDYVFSFDRMLSPEGDTNVYLQYT 333 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 +ARC SI R+A ++D + F S SE L + + +E Sbjct: 334 HARCMSILRKA-----NMDLNGFRE--CGNISLSHRSEWSLACSILRFNDAVEKVAKDLM 386 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 P L YLYDL + + R+ + + N+R L +M A ++ GLN++ Sbjct: 387 PNVLCKYLYDLCISLNAFY---RDCRVIGTPEQNSRLLLIM------AAEKVMRQGLNLL 437 Query: 578 GVE 580 G++ Sbjct: 438 GID 440 >gi|118381734|ref|XP_001024027.1| arginyl-tRNA synthetase family protein [Tetrahymena thermophila] gi|89305794|gb|EAS03782.1| arginyl-tRNA synthetase family protein [Tetrahymena thermophila SB210] Length = 616 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 28/111 (25%), Positives = 56/111 (50%), Gaps = 3/111 (2%) Query: 75 DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG 134 D ++ + + +GF+ + L + +++I+ +G+ Y K K+ ++F S N Sbjct: 91 DCAIEKLGVTDQGFLTIKLKQQVIEDEINNILKNGLNYPTE---KKQKIAVDFSSPNIAK 147 Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 MHVGH R ++G+++ + F +EV R ++ D G Q L + +Y Sbjct: 148 EMHVGHLRSTIIGESICRIFEFQNHEVLRINHLGDWGTQFGMLITYMKRKY 198 >gi|289806421|ref|ZP_06537050.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 229 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 17/177 (9%) Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 L + + VG +V++ L + + FD+ + + N Y+QYAY R S+FR+A Sbjct: 69 LEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML-AFEGNTAPYMQYAYTRVLSVFRKA- 126 Query: 470 DIFPDLDFD-LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 D+D L VI E E QL L ++ + P+ + YLYD+ Sbjct: 127 ----DIDEQALASAPVIISEDR----EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDV 178 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A +F G + H + A N + RL+L A + GL+ +G+E+ M Sbjct: 179 AGLFSGFYEH------CPILSAENDAVRNSRLKLAQLTAKTLKLGLDTLGIETVERM 229 >gi|195036802|ref|XP_001989857.1| GH18567 [Drosophila grimshawi] gi|193894053|gb|EDV92919.1| GH18567 [Drosophila grimshawi] Length = 571 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 26/60 (43%), Positives = 34/60 (56%) Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 ++ +EF S N P HVGH R ++G+ LA+L GY TR Y+ D G Q LAL V Sbjct: 114 RIVVEFSSPNIAKPFHVGHLRSTIIGNVLANLHKHLGYRTTRLNYLGDWGTQFGLLALGV 173 Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust. Identities = 68/302 (22%), Positives = 120/302 (39%), Gaps = 45/302 (14%) Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV 370 R +V D P++KSDGS Y A D+A + +R F M+YV+ + + + L Sbjct: 287 REIVVVDQRRVPVIKSDGSTLYLARDIAALLERQQRLQFSRMLYVVDNGQADHFNALFQT 346 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE---VGSDSVRFMML 427 AA + ++ L + ++ + G MS R G+ I L V++E V + Sbjct: 347 AAKLDKR-------LTDKLQHVKFGRIHGMSTRQGNAIFLSDVLNEARDVMREKRSNSST 399 Query: 428 WRKNSELLDFDFCKV-----------KEQSKENPVFYVQYA------------YARCRSI 464 + N L D + C + K++ + + F Q A Y CR Sbjct: 400 TKVNVALNDDELCDILGVSAVLVNVLKQRRQRDHEFSWQQALQVNGDTGIKLQYTHCR-- 457 Query: 465 FRQAKDIFPDLDF-DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 D F ++ ++ P +E + + L+ LA + + + A E L Sbjct: 458 LHSLLDNFRHIELAEIKPS--WQHLTEEPSDAIDLLYELARFEQCVWQAKEQLEACVLVN 515 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 YL+ L + + R RL Q + RL L HA + G+ ++G++ + Sbjct: 516 YLFGLCN------ATSRALKRLPVKQEKCLQKQTQRLLLFHAAKRTLQQGMQLLGLKPLD 569 Query: 584 EM 585 +M Sbjct: 570 QM 571 >gi|189502012|ref|YP_001957729.1| arginyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2] gi|238692307|sp|B3ERZ8|SYR_AMOA5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|189497453|gb|ACE06000.1| hypothetical protein Aasi_0599 [Candidatus Amoebophilus asiaticus 5a2] Length = 596 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 62/297 (20%), Positives = 128/297 (43%), Gaps = 49/297 (16%) Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDN-MIYVMGSDHSGYVKRLEAVAAAVSEKKA 379 ++ LL++DG+ Y DL +Y+ N ++YV+G++ + + L + A + A Sbjct: 317 EKLLLRADGTSVYITQDLGTADLRYQDFKPNKLVYVVGNEQDYHFEVLAKIMARLGRPYA 376 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE----------------------- 416 L L D KM R G + ++DE Sbjct: 377 ---TDLYHLSYGMVDLPTGKMKSREGTVVDADMLIDEMIETAEEHTRELGKIDGFSKEEA 433 Query: 417 ------VGSDSVRFMMLWRKNSELLDFD-FCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 + ++++ +L + L FD + Q P ++QY +AR ++ R+ + Sbjct: 434 KDLYHILAMGALKYFLLRVDAKKRLLFDPQASIDFQGDTGP--FIQYTHARIAAVLRKVQ 491 Query: 470 DIFPDLDFDLFPRNVIPQES-EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 D+ F+ +++ QE+ E ++IV LA +P+ ++ + +A P LA ++ ++ Sbjct: 492 Q--ADIAFN----DIVEQENFVLHPLEREVIVELAAFPKKLQESALAYAPAILAQHVLEI 545 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A ++ R L + + K+ + R+QL VA +I + ++++G+ P M Sbjct: 546 AKAYN------RMYAELSILHEQDTKVQLFRIQLSVLVAQVIKTVMHLLGIVVPERM 596 Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust. Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 2/116 (1%) Query: 59 LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 + P IA I ++ + + + KGF+NL + + + + + +G L Sbjct: 54 VSPEVIANKIGDWMQTNTQAIASYNVVKGFLNLSIKDTIWLASFNQMYQNK-HFGY-LPS 111 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 K+ +E+ S N P+H+GH R +G ++ ++ +GYEV + +ND G I Sbjct: 112 NRQKIVVEYSSPNTNKPLHLGHLRNNFLGHAVSEILQAAGYEVYKVNLVNDRGIHI 167 >gi|289672019|ref|ZP_06492909.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5] Length = 270 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 30/183 (16%) Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 LR + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 111 LRSIAKAVGISAVKYADLSKHRASDYSFNFDQMLS-FEGNTAPYLLYAYTRVAGVFRKLG 169 Query: 470 DIFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 F D ++ PQE E L LA++ + N P+ L YLY Sbjct: 170 SAF-----DASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLY 217 Query: 527 DLASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 DLA +F + + G ENP + RL+L + GL+++G+E+ Sbjct: 218 DLAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETL 267 Query: 583 NEM 585 M Sbjct: 268 ERM 270 >gi|255016789|ref|ZP_05288915.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL F2-515] Length = 108 Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats. Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 1/86 (1%) Query: 22 IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDS 80 + +E+ + I++E P+D HG STN AM L+R P IAE IV +K D + Sbjct: 23 VGLEETEVPEILLEVPKDKKHGDYSTNIAMQLARVAKKAPRQIAESIVPELKKDNKLIKE 82 Query: 81 VFIAGKGFINLYLSPSYLRKILSSIV 106 V IAG GFIN YL +YL ++ I+ Sbjct: 83 VEIAGPGFINFYLDNAYLTDLVPVIL 108 >gi|240275922|gb|EER39435.1| arginyl-tRNA synthetase [Ajellomyces capsulatus H143] Length = 898 Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 22/173 (12%) Query: 58 GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNL 116 G P + IV + + + ++G I Y P L K ++SSI+ + YG N Sbjct: 82 GKKPAEVTAQIVENLPPSDLIGTPVVSGT-HIQFYFKPEPLTKTVISSILKNRATYGTNA 140 Query: 117 -IG--------KGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166 +G KG K + +EF S N P H GH R ++G LA+L G++V + Y Sbjct: 141 NVGLRDPADPSKGKKKIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNY 200 Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLKHVGKELADK 216 + D G Q LA Y++ Y N+ +L P + VY+K + K++A++ Sbjct: 201 LGDWGKQYGLLANG----YEK--YGNEEELIKDPINHLFDVYVK-INKDVAEQ 246 >gi|325093284|gb|EGC46594.1| arginyl-tRNA synthetase [Ajellomyces capsulatus H88] Length = 1295 Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 22/173 (12%) Query: 58 GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNL 116 G P + IV + + + ++G I Y P L K ++SSI+ + YG N Sbjct: 479 GKKPAEVTAQIVENLPPSDLIGTPVVSGT-HIQFYFKPEPLTKTVISSILKNRATYGTNA 537 Query: 117 -IG--------KGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166 +G KG K + +EF S N P H GH R ++G LA+L G++V + Y Sbjct: 538 NVGLRDPADPSKGKKKIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNY 597 Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLKHVGKELADK 216 + D G Q LA Y++ Y N+ +L P + VY+K + K++A++ Sbjct: 598 LGDWGKQYGLLANG----YEK--YGNEEELIKDPINHLFDVYVK-INKDVAEQ 643 >gi|258648951|ref|ZP_05736420.1| arginine--tRNA ligase [Prevotella tannerae ATCC 51259] gi|260850551|gb|EEX70420.1| arginine--tRNA ligase [Prevotella tannerae ATCC 51259] Length = 642 Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 69/307 (22%), Positives = 127/307 (41%), Gaps = 57/307 (18%) Query: 315 MVGDDVDRPLL-KSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAA 372 + D +D+ LL ++DG+ Y D+ ++ + D MIYV+G++ + K L + Sbjct: 357 LAADGLDQKLLLRADGTSVYMTQDIGTATQRFNDYDIDKMIYVVGNEQDYHFKVLSLLLD 416 Query: 373 AVSEKKAQINVLLC-ELVRL------YRDGMPI-------KMSKRAGDFITL-------- 410 + K + V +V L R+G + M A + I Sbjct: 417 KLGFKWGKELVHFSYGMVELPNGKMKSREGTVVDADDLIAAMQDEAAETIEAAGKFEDRP 476 Query: 411 ----RHVVDEVGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAY 458 + V VG ++++ +L RKN E +DF+ N ++QY Y Sbjct: 477 AEEKQEVARIVGLGALKYFLLKVDARKNMVFNPEESIDFN---------GNTGPFIQYTY 527 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 AR RS+ R+A++ + L ++ E ++ LAE+P ++ A P Sbjct: 528 ARIRSVIRKAEEGGISIPATL------AAGAKLSDKEESIVQRLAEFPAIVRQAGAEYAP 581 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 +A Y YDL ++ + ++ + + RL L VA +I +G++++G Sbjct: 582 NAIANYCYDLVKEYNQFYHD------FSILREADEEKKRFRLVLSANVAKVIRTGMSLLG 635 Query: 579 VESPNEM 585 +E P M Sbjct: 636 IEVPERM 642 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 2/115 (1%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYG-RNLIGK 119 P A+ I A +K +V + F KGF+NL + + L+ I + YG + + Sbjct: 93 PEETAQEIGAYLKEHSNVVADFNVVKGFLNLCIDSAAWIDTLNDIHTAE-NYGLQPVTAD 151 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 V IEF S N P+H+GH R ++G +LA ++ +G V + +ND G I Sbjct: 152 APLVMIEFSSPNTNKPLHLGHVRNNLLGWSLAKILEANGNRVVKTNIVNDRGIHI 206 >gi|225563328|gb|EEH11607.1| arginyl-tRNA synthetase [Ajellomyces capsulatus G186AR] Length = 1042 Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 22/173 (12%) Query: 58 GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNL 116 G P + IV + + + ++G I Y P L K ++SSI+ + YG N Sbjct: 479 GKKPAEVTAQIVENLPPSDLIGTPVVSGT-HIQFYFKPEPLTKTVISSILKNRATYGTNA 537 Query: 117 -IG--------KGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166 +G KG K + +EF S N P H GH R ++G LA+L G++V + Y Sbjct: 538 NVGLRDPADPSKGKKKIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNY 597 Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLKHVGKELADK 216 + D G Q LA Y++ Y N+ +L P + VY+K + K++A++ Sbjct: 598 LGDWGKQYGLLANG----YEK--YGNEEELIKDPINHLFDVYVK-INKDVAEQ 643 >gi|154281911|ref|XP_001541768.1| arginyl-tRNA synthetase [Ajellomyces capsulatus NAm1] gi|150411947|gb|EDN07335.1| arginyl-tRNA synthetase [Ajellomyces capsulatus NAm1] Length = 517 Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 22/173 (12%) Query: 58 GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNL 116 G P + IV + + + ++G I Y P L K ++SSI+ + YG N Sbjct: 82 GKKPAEVTAQIVENLPPSDLIGTPVVSGT-HIQFYFKPEPLTKTVISSILKNRATYGTNA 140 Query: 117 -IG--------KGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166 +G KG K + +EF S N P H GH R ++G LA+L G++V + Y Sbjct: 141 NVGLRDPADPSKGKKKIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNY 200 Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLKHVGKELADK 216 + D G Q LA Y++ Y N+ +L P + VY+K + K++A++ Sbjct: 201 LGDWGKQYGLLANG----YEK--YGNEEELIKDPINHLFDVYVK-INKDVAEQ 246 >gi|149921434|ref|ZP_01909887.1| hypothetical protein PPSIR1_26758 [Plesiocystis pacifica SIR-1] gi|149817754|gb|EDM77219.1| hypothetical protein PPSIR1_26758 [Plesiocystis pacifica SIR-1] Length = 619 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 71/304 (23%), Positives = 117/304 (38%), Gaps = 64/304 (21%) Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 L KSDG+ Y DLA + K+E G D IYV+ + S + +++ + +AQ Sbjct: 326 LRKSDGTGLYATKDLALARMKFEEYGVDRSIYVVDARQSDHFRQVFLTLKKMGFDQAQ-- 383 Query: 383 VLLCELVRLYRDGMP-IKMSKRAGDFITLRHV---------------------------- 413 LCE V +P MS R G+ I R + Sbjct: 384 --LCEHVAYEMVELPDGAMSSRKGNVILFRALREQLAAALESSHFEGIRSNPDMLAEWGA 441 Query: 414 ------------VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461 +++V ++++ ML R N++ + FD K + + +QY AR Sbjct: 442 DEASANAAMAKAIEDVSLGAIKYGMLARDNNQKIVFDMDKWTMVAGGDGGAALQYVTARS 501 Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYK 520 S+ R+ I LD L + + +E L+ L P + +A+ P Sbjct: 502 ASLLRKNAAIGKTLDPALLEDGATLEPGTLTEPAERGLMQELINLPGTVAHASKLLRPSL 561 Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK-----LTMMRLQLVHAVASIINSGLN 575 L LY ++ ++ RF Q N K L RL LV A ++ GL+ Sbjct: 562 LCAQLYAISRAYN------------RFQQTCNVKNQEGGLLQSRLLLVQATREALSWGLS 609 Query: 576 IIGV 579 ++G+ Sbjct: 610 LLGI 613 Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 2/89 (2%) Query: 88 FINLYLSPSYLRKILSSIVVSG--IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 ++NL L+P +L G +Y KV +EF N HVGH R Sbjct: 91 YLNLRLNPHRTGALLLPAWARGERPDYAGTAAHGDAKVMVEFSQPNTHKGFHVGHMRNLC 150 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQI 174 +GD L L+ +G EV Y+ D G + Sbjct: 151 LGDALVRLLRATGNEVVAANYLGDVGTHV 179 >gi|255070885|ref|XP_002507524.1| arginyl-tRNA synthetase [Micromonas sp. RCC299] gi|226522799|gb|ACO68782.1| arginyl-tRNA synthetase [Micromonas sp. RCC299] Length = 646 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 124/530 (23%), Positives = 207/530 (39%), Gaps = 97/530 (18%) Query: 60 DPLTIAELIVARIKIDPDVDSVF----IAGKGFINLYLSPSYLRK-ILSSIVVSGIEY-- 112 +P ++AE IV I P + +F +AG GF+N+ S S+L +L ++V S E Sbjct: 123 NPRSLAEAIVEAI---PGREHLFAQTSVAGPGFVNVTFSASFLAAGVLDTVVNSTDEKIR 179 Query: 113 ---GRNL-IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168 RN+ I K V+ + MHVGH R ++G+T+ + G E R ++ Sbjct: 180 IPPQRNMSIPKRAVVDYSSPNIAKASEMHVGHLRSTIIGETICRALESFGVETVRLNHVG 239 Query: 169 DAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK 228 D G Q L L+ Q +DL E Y V K L F ++ Sbjct: 240 DWGTQFGML-LTHLHDMQMGSDFAITDLQEFY-------KVAK----------LRFDKD- 280 Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE-DDFHRGDPSPIRDIID--NLARQGY 285 D+ +A ++R L+A ++Q E + R D I ++D + R Sbjct: 281 -----DDFKARAQSAVVR--LQAGDVQMRKLWEEICEISRRDFEEIYRVLDISIIERGES 333 Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADL-AYFK 342 Y I+P + +K Q + G+ PL+ KSDG + Y + DL A ++ Sbjct: 334 FYNEIIPLVLDELVKKGIAVEDQGAL--CIFGNLESTPLICRKSDGGFNYASTDLAALWQ 391 Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVS-----EKKAQINVLLCEL---VRLYRD 394 + D +IYV G K EA+ A + +KK + L + + + D Sbjct: 392 RTTQLEADQIIYVT---DVGQSKHFEAIFDAANRAGWLDKKDNTKIRLDHVGFGLVMGED 448 Query: 395 GMPIKMSKRAGDFITLRHVVDE---------------------------VGSDSVRFMML 427 G + R+G + LR ++ E +G +V++ L Sbjct: 449 GK--RFRTRSGGTVPLRSLLSEAQSRCLESLQTRSSDLDDKELLEASHIMGIAAVKYADL 506 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487 S F + ++ + K N Y+ Y +AR ++ +A+D DL + Q Sbjct: 507 HNNRSTNYVFSYDRMLDM-KGNTAVYLLYTHARISTLLSRAED--QDLT------SPAHQ 557 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 D E L V + + P + P +L Y Y L ++ +S Sbjct: 558 MVFTDEKERALAVAILKLPDALRAVVQDLLPSRLCDYAYHLCVAYNEFYS 607 >gi|295135663|ref|YP_003586339.1| arginyl-tRNA synthetase [Zunongwangia profunda SM-A87] gi|294983678|gb|ADF54143.1| arginyl-tRNA synthetase [Zunongwangia profunda SM-A87] Length = 599 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 15/133 (11%) Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 ++QY +AR +SI R+A DF+ + + E E E +LI + YP I+ A Sbjct: 482 FIQYTHARIQSILRKA-------DFEY--ESQLVSEYELQNKEKELIKQIQLYPETIQLA 532 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572 P +A Y YDL F+ + + + + A +R QL VA+II S Sbjct: 533 AENHSPALIANYTYDLVKEFNSFYQN------VSILGAEKDMERQLRTQLSKMVANIIKS 586 Query: 573 GLNIIGVESPNEM 585 ++G++ P+ M Sbjct: 587 SFGLLGIQVPDRM 599 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 63/121 (52%), Gaps = 2/121 (1%) Query: 55 RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYG- 113 R + +P+ + E I ++ + + S F KGF+N+ L+ +Y + I + +YG Sbjct: 55 RQVKTNPVKLGEDIGKYLQENVTIVSRFNVVKGFLNILLNDAYYLDFFNEIK-NDPDYGF 113 Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173 + K+ +E+ S N P+H+GH R ++G ++A ++ +G EV + IND G Sbjct: 114 VKELEDPRKIMVEYSSPNTNKPLHLGHIRNNLLGFSVAEILEAAGNEVYKTQIINDRGIH 173 Query: 174 I 174 I Sbjct: 174 I 174 >gi|156052483|ref|XP_001592168.1| arginyl-tRNA synthetase [Sclerotinia sclerotiorum 1980] gi|154704187|gb|EDO03926.1| arginyl-tRNA synthetase [Sclerotinia sclerotiorum 1980 UF-70] Length = 686 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 13/142 (9%) Query: 55 RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL-SSIVVSGIEYG 113 R G P +AE A+ P V G ++ + L ++L +I+ G +G Sbjct: 127 RVKGKKPNELAEEWAAKYPESPLVHKPTTNGV-YLQFFFKADKLNELLIPTIIRQGSNFG 185 Query: 114 RN----LI-----GKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR 163 N L+ KG K + IEF S N P H GH R ++G L++L A G+ VTR Sbjct: 186 ENKYLGLVDPEDPSKGQKKIVIEFSSPNIAKPFHAGHLRSTIIGGFLSNLYAAVGWNVTR 245 Query: 164 EYYINDAGAQINTLALSVFWRY 185 Y+ D G Q LAL F RY Sbjct: 246 VNYLGDWGKQYGLLALG-FDRY 266 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 66/304 (21%), Positives = 124/304 (40%), Gaps = 62/304 (20%) Query: 316 VGDDVDRPLLKS-DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAA 373 +G + + ++K DG+ Y D++ + E+ FD MIYV+ +D ++++L + Sbjct: 408 IGKGLGKAIVKRRDGTALYLTRDISELLQRKEKYDFDQMIYVVATDQELHLQQLFKIIEL 467 Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-- 431 + K+ + C+ + G+ MS R G L ++ +V M +KN Sbjct: 468 LGYKELRDK---CQHINF---GLVHGMSTRRGTVKFLDDILRDVAEKMHEVM---QKNEA 518 Query: 432 -----------SELLDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRS 463 S++L V++ S + + Y+QYA+AR S Sbjct: 519 KYEQIADPLATSDILGISSVMVQDMSGKRVNGYTFNMDTMTSFEGDTGPYLQYAHARLCS 578 Query: 464 IFRQAK---DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520 I R+A + D L + LI L++YP V++N EP Sbjct: 579 ITRKAALTAEEIASADLSLLT----------EIHAQNLIRTLSQYPDVVQNTVKTLEPTT 628 Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 + YL+ + V + H R + + +++ R+ L A ++ +G+ I+G+ Sbjct: 629 ILTYLFKMTHVLSSSYDHLR-------IMGSEKEVMKARMALYDAARVVLYNGMRILGL- 680 Query: 581 SPNE 584 SP E Sbjct: 681 SPVE 684 >gi|331009577|gb|EGH89633.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 259 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 47/185 (25%), Positives = 78/185 (42%), Gaps = 30/185 (16%) Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467 + LR + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 98 VELRSIAKAVGISAVKYADLSKHRASDYSFNFDQMLS-FEGNTAPYLLYAYTRVAGVFRK 156 Query: 468 AKDIFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 FD ++ PQE E L LA++ + N P+ L Y Sbjct: 157 L-----GTPFDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAY 204 Query: 525 LYDLASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 LYDLA +F + + G ENP + RL+L + GL+++G+E Sbjct: 205 LYDLAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLE 254 Query: 581 SPNEM 585 + M Sbjct: 255 TLERM 259 >gi|310797950|gb|EFQ32843.1| arginyl-tRNA synthetase [Glomerella graminicola M1.001] Length = 633 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 77/308 (25%), Positives = 134/308 (43%), Gaps = 70/308 (22%) Query: 316 VGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRL----EA 369 G ++RP++ K DG+ Y D++ + ++ FD+MIYV+ S ++K+L E Sbjct: 356 AGKSLERPIIRKKDGTALYLTRDISELLHREKKYNFDHMIYVVASQQDLHLKQLFKIIEL 415 Query: 370 VAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428 + + KK Q IN GM + MS R G L ++ +VG M Sbjct: 416 MGYPETAKKCQHINF-----------GMVLGMSTRKGTVKFLDDILRDVGDKMHEVM--- 461 Query: 429 RKN-------------SELLDFDFCKVKEQSKE---NPVF--------------YVQYAY 458 +KN +++L V++ S + N F Y+QYA+ Sbjct: 462 KKNETKYSQVENPEATADILGISSVMVQDMSGKRINNYKFDMDTMTSFEGDTGPYLQYAH 521 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSE--LQLIVHLAEYPRVIENATIAQ 516 AR SIFR+A P+ V+ + T + ++LI +++YP V++N Sbjct: 522 ARLCSIFRKAG--VPE-------EEVVKADLSLLTEKHAIELIRVVSQYPDVVQNTLKTL 572 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 EP + YL+ L V + LR V + ++ RL L + +++ +G+ + Sbjct: 573 EPTTVLTYLFRLTHVVSSSYD------VLRIV-GSEPEIQKARLALYSSARTVLYNGMRL 625 Query: 577 IGVESPNE 584 +G+ SP E Sbjct: 626 LGL-SPVE 632 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 K+ +EF S N P H GH R ++G +A+L +G++VTR Y+ D G Q LAL Sbjct: 154 KIIVEFSSPNIAKPFHAGHLRSTIIGGFIANLYDGAGWDVTRINYLGDWGKQYGLLALG- 212 Query: 182 FWRY 185 F R+ Sbjct: 213 FERF 216 >gi|302542536|ref|ZP_07294878.1| arginine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653] gi|302460154|gb|EFL23247.1| arginine-tRNA ligase [Streptomyces himastatinicus ATCC 53653] Length = 358 Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 41/181 (22%) Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 G + R ++ +GSD+ R+ +L +L D D + Q + NP+F V+YA+A Sbjct: 219 GAGVGARELLTRLGSDAARWGLLRAAAHDLPDLDPAHLLAQREGNPLFRVRYAHA----- 273 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 L R+V E+E + L+ L ++PR +E+A + P ++A + Sbjct: 274 --------------LAKRSVGDAEAE-GADDSALLGLLGDFPRTVESAARHRAPDRVARH 318 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 L A F+ RK +L A ++ +GL ++G+ +PN Sbjct: 319 LVATADA---------------FLPGTRRK------RLAEATRVVLANGLRLLGISAPNR 357 Query: 585 M 585 + Sbjct: 358 I 358 >gi|239982303|ref|ZP_04704827.1| arginyl-tRNA synthetase [Streptomyces albus J1074] gi|291454148|ref|ZP_06593538.1| arginyl tRNA synthetase [Streptomyces albus J1074] gi|291357097|gb|EFE83999.1| arginyl tRNA synthetase [Streptomyces albus J1074] Length = 324 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 56/109 (51%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 AD S + + ++ ++ + +R+V+ERP G ++N A+ L+R G P + Sbjct: 4 ADLSRAVLSAVRSAVDGGELAVAVPERVVVERPGPGGAGEWASNVALRLAREAGRPPREV 63 Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYG 113 AE++ +R+ P V V + G GF+N+ L+ + ++ I G YG Sbjct: 64 AEVLRSRLVAAPGVAGVEVTGPGFLNVTLAGDSVGALVDRIAAEGEAYG 112 Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 14/117 (11%) Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 +G D +R+ +L +L +V EQ NP+F V+YAYAR R + + Sbjct: 171 LGDDGLRWALLHPAPHDL--PHGAEVLEQRARNPLFRVRYAYARSRGLVAGGAAL----- 223 Query: 477 FDLFPRNVIPQESEFDTSELQLIVH-LAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 ++P +++ L E P V+ A P +LA L LA F Sbjct: 224 ------GIVPGSGPVTGEAARVLTGLLGEQPAVLVAAARKGAPDRLARQLVTLADAF 274 >gi|299144758|ref|ZP_07037826.1| arginine--tRNA ligase [Bacteroides sp. 3_1_23] gi|298515249|gb|EFI39130.1| arginine--tRNA ligase [Bacteroides sp. 3_1_23] Length = 694 Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 65/303 (21%), Positives = 124/303 (40%), Gaps = 68/303 (22%) Query: 324 LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 LL+ DG+ Y D+ K ++ + + MIYV+G++ + + + L + + + + Sbjct: 419 LLRGDGTSVYMTQDIGTAKLRFADYPINKMIYVVGNEQNYHFQVLSILLDKLGFEWGKSL 478 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416 V + +G KM R G + +++E Sbjct: 479 VHFSYGMVELPEG---KMKSREGTVVDADDLMEEMIATAKETSQELGKLDGLTQEEADDI 535 Query: 417 ---VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 VG ++++ +L RKN E +DF+ N ++QY YAR +S+ Sbjct: 536 ARIVGLGALKYFILKVDARKNMTFNPKESIDFN---------GNTGPFIQYTYARIQSVL 586 Query: 466 RQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 R+A + + P+ IP E E LI +A++ V++ A P +A Sbjct: 587 RKAAESGIVIPEQ---------IPAGIELSEKEEGLIQMVADFAAVVKQAGEDYSPSIIA 637 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 Y YDL ++ + ++ N + + R+ L VA ++ G+N++G+E P Sbjct: 638 NYTYDLVKEYNQFYHD------YSILREENEAVKVFRIALSANVAKVVRLGMNLLGIEVP 691 Query: 583 NEM 585 + M Sbjct: 692 SRM 694 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 63/118 (53%), Gaps = 8/118 (6%) Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P A+ I +K + + F KGF+NL ++ + ++L+ I +YG + K Sbjct: 56 PEQTAQEIGEYLKANDPAVAAFNVIKGFLNLTIASATWIELLNEIQADE-QYG---LVKA 111 Query: 121 TK----VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 T+ V IE+ S N P+H+GH R ++G+ LA+++A +G +V + +ND G I Sbjct: 112 TETSPLVMIEYSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHI 169 >gi|163786141|ref|ZP_02180589.1| arginyl-tRNA synthetase [Flavobacteriales bacterium ALC-1] gi|159878001|gb|EDP72057.1| arginyl-tRNA synthetase [Flavobacteriales bacterium ALC-1] Length = 592 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 1/115 (0%) Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P I E I ++ + D+ F KGF+N+ + SY SI YG + Sbjct: 53 NPAVIGEQIGQYLQDNVDLIKGFNVVKGFLNIEIDDSYYLDFFQSIK-GKTNYGFANLKD 111 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 V +E+ S N P+H+GH R ++G ++A ++ SG +V + IND G I Sbjct: 112 DKAVMVEYSSPNTNKPLHLGHVRNVLLGYSVAEILKASGKKVYKTQIINDRGIHI 166 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 14/133 (10%) Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 ++QY YAR +SI R+A LD ++ N I E E QL+ L ++P VI+N+ Sbjct: 474 FIQYTYARIQSILRKATS--TSLDGQVY--NSI----ELHEKEKQLLKQLEQFPEVIQNS 525 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572 P +A + YDL F+ + + + + A+ + R++L V I + Sbjct: 526 AEQHSPALIANFTYDLVKDFNSFYQN------VSILGADTEEEKSFRVELSRTVGQTIKN 579 Query: 573 GLNIIGVESPNEM 585 ++G+ P M Sbjct: 580 AFGVLGITVPERM 592 >gi|169828341|ref|YP_001698499.1| arginyl-tRNA synthetase 2 [Lysinibacillus sphaericus C3-41] gi|168992829|gb|ACA40369.1| Arginyl-tRNA synthetase 2 [Lysinibacillus sphaericus C3-41] Length = 557 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 15/154 (9%) Query: 33 VIERPRDCAHGHLST---NAAMILSRPLGLDPLTIAELIVARIK--IDPDVDSVFIAGKG 87 ++E+P+ G ++ A I +P P IA I ++++ I V SV G Sbjct: 25 LLEKPKSLERGDMAFPCFTLAKIWKKP----PQQIAIDIASQLQNEIIHQVQSV----GG 76 Query: 88 FINLYLSP-SYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 ++N++L +++L I+ YG N +G+ V ++F S N P +GH R V+ Sbjct: 77 YVNIFLHQVKVTQQVLGLIMQEQQNYGTNQAERGSVV-LDFSSPNIAKPFSMGHLRSTVI 135 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 G+ LA++ +GY+ R ++ D G Q L ++ Sbjct: 136 GNALANIAVKNGYQAIRINHLGDWGTQFGKLIVA 169 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 73/291 (25%), Positives = 125/291 (42%), Gaps = 55/291 (18%) Query: 324 LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 + K+DG+ Y DLA Y + +Y+ + + YV+G++ + + K+L V + A+ Sbjct: 293 ITKTDGATLYATRDLAAAFYRQQQYQP--NKIFYVVGNEQTLHFKQLFQVIEKMGYGWAK 350 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416 ++ + +DG KMS R G + L V+ E Sbjct: 351 -DLQHVPFGMMLKDGK--KMSTRKGKVVLLADVLAEAIATAKRNIEDKNPHLQQKERVAQ 407 Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF-YVQYAYARCRSIFRQAKDIFPD 474 VG +V F L K L D +F + + E YVQY+YAR SI AK P Sbjct: 408 QVGVGAVIFNDL--KYHRLNDIEFSIEQMMNFEGETGPYVQYSYARICSIL--AKGNVPS 463 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 P +I+ L ++P+V++ + +P +A Y LA +F+ Sbjct: 464 QLKSYAP---------LGQQAWSIILLLEQFPQVVDASFNQADPSLIAKYALQLARLFNK 514 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++H + + A++ + RL L H VA ++ L ++G+ESP M Sbjct: 515 YYAHQK-------ILADDAQ-QASRLALCHCVAIVLKESLALLGIESPENM 557 >gi|326476808|gb|EGE00818.1| arginyl-tRNA synthetase [Trichophyton tonsurans CBS 112818] Length = 584 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 132/598 (22%), Positives = 224/598 (37%), Gaps = 132/598 (22%) Query: 50 AMILSRPLGLDPLTIAELIVARIKIDPDV--DSVFIAGKGFINLYLSPSYLRKILSSIVV 107 A +LS P+ + IAE+I ++ D D D+V A + + L I + + + Sbjct: 28 ANVLSAPVDIYRSYIAEIIQKLVECDEDTAYDAVQWANAS------TNADLMLITARLKL 81 Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167 G+ N + +F S N H GH R ++G +++L G++V + Y+ Sbjct: 82 KGV----NPKQLAEDIASKFSSPNIAKEFHAGHLRSTIIGAYISNLYESMGWDVIKVNYL 137 Query: 168 NDAGAQINTLALSVFWRY--QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL---- 221 D G Q LA V W+ + L+ + P + VY K +K +SE Sbjct: 138 GDWGKQFGLLA--VGWQRFGSEELFAEE---PLKHLLEVYAKINSLFAPEKEASEQARDR 192 Query: 222 ---LNFPEEKWLPIVKDYSVQ----------AMMKIIRD--------DLKALNIQHDIFI 260 + E K L ++ Q A+ K RD LNI+ D++ Sbjct: 193 GEDTSEIESKGLFAARNAFFQKMEDGDPDAIALWKRFRDVSIERYISTYARLNIKFDVYS 252 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 E S + ++L ++ VY + T D + + +G V Sbjct: 253 GESTV----KSSTVEKAESLLKEKGVY------TEDNGTWIIDFKKHG----APHLGVAV 298 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA-----AAV 374 R + G+ TY ++A + E+ FD MIYV+ ++ Y +RL V Sbjct: 299 ARTRI---GTTTYLLRNIAAALERVEKYQFDKMIYVVSTEQDLYFQRLFKTIELMGYTDV 355 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN--- 431 + K IN G + MS R G L ++DE G M RKN Sbjct: 356 AAKLEHINF-----------GKVMGMSSRLGTVKILSDILDECGRAMHDVM---RKNPAK 401 Query: 432 -------SELLD---------------------FDFCKVKE-QSKENPVFYVQYAYARCR 462 +E+ D FD K+ + P Y QYA+AR Sbjct: 402 YEQIENPAEVSDTLGITAVMVQDMAGKRIHNYPFDIAKMTSFEGDTGP--YHQYAHARLC 459 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEF--DTSELQLIVHLAEYPRVIENATIAQEPYK 520 SI R+ D+ P+ + + + ++ +A+YP V NA EP Sbjct: 460 SIVRKV---------DIDPKEITTANFSLLKEPHAINILRLMAQYPDVTCNALKTLEPTT 510 Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 + YL+ LA + ++ + A + ++ + RL L ++ +G+ ++G Sbjct: 511 ILTYLFRLAHQVSSGYD------VIKVIGAESHEIMIARLALYEGARQVLENGMRLLG 562 >gi|154296931|ref|XP_001548894.1| hypothetical protein BC1G_12554 [Botryotinia fuckeliana B05.10] gi|150843081|gb|EDN18274.1| hypothetical protein BC1G_12554 [Botryotinia fuckeliana B05.10] Length = 634 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 43/137 (31%), Positives = 63/137 (45%), Gaps = 12/137 (8%) Query: 55 RPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL-SSIVVSGIEYG 113 R G P +AE A+ P V G ++ + L ++L +I+ +G Sbjct: 81 RVKGKKPNELAEEWAAKFPESPLVHKPTTNGV-YLQFFFKADKLNELLIPTIIQQKTSFG 139 Query: 114 RN----LI-----GKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR 163 +N L+ KG K + IEF S N P H GH R ++G L++L A G++VTR Sbjct: 140 QNKYLGLVDPEDPSKGQKKIVIEFSSPNIAKPFHAGHLRSTIIGGFLSNLYAAVGWDVTR 199 Query: 164 EYYINDAGAQINTLALS 180 Y+ D G Q LAL Sbjct: 200 VNYLGDWGKQYGLLALG 216 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 64/280 (22%), Positives = 111/280 (39%), Gaps = 52/280 (18%) Query: 316 VGDDVDRPLLKS-DGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAA 373 VG + + ++K DG+ Y D++ + E+ FD MIYV+ +D ++++L + Sbjct: 362 VGKGLGKAIVKRRDGTALYLTRDISELLQRKEKYDFDQMIYVVATDQELHLQQLFKIIEL 421 Query: 374 VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN-- 431 + K+ + C+ + G+ MS R G L ++ +V M +KN Sbjct: 422 LGYKELRDK---CQHINF---GLVHGMSTRRGTVKFLDDILRDVAEKMHEVM---QKNEA 472 Query: 432 -----------SELLDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRS 463 S++L V++ S + + Y+QYA+AR S Sbjct: 473 KYEQIADPVATSDILGISSVMVQDMSGKRVNGYTFNMETMTSFEGDTGPYLQYAHARLCS 532 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTS--ELQLIVHLAEYPRVIENATIAQEPYKL 521 I R+A L P + + T LI L++YP V++N EP + Sbjct: 533 ITRKAA---------LTPEEIASADLSLLTEVHAQNLIRTLSQYPDVVQNTVKTLEPTTI 583 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 YL+ + V + H R R V L M+L+ Sbjct: 584 LTYLFKMTHVLSSSYDHLRIMGSEREVMKARMALLTMQLE 623 >gi|330886169|gb|EGH20070.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. mori str. 301020] Length = 430 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 30/183 (16%) Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 LR + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 271 LRSIAKAVGISAVKYADLSKHRASDYSFNFDQML-SFEGNTAPYLLYAYTRVAGVFRKL- 328 Query: 470 DIFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 FD ++ PQE E L LA++ + N P+ L YLY Sbjct: 329 ----GTPFDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLY 377 Query: 527 DLASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 DLA +F + + G ENP + RL+L + GL+++G+E+ Sbjct: 378 DLAGLFSSFYENCPILGAENPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETL 427 Query: 583 NEM 585 M Sbjct: 428 ERM 430 >gi|229059877|ref|ZP_04197252.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH603] gi|228719422|gb|EEL71025.1| Arginyl-tRNA synthetase 2 [Bacillus cereus AH603] Length = 178 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 6/173 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 ++ ++ L I + +ILD +IE P+ G + L++ P IA Sbjct: 2 NYKTQFAKSLSNIFTNELTQNQILD--LIETPKQDEFGDAAF-PCFSLAKQYKKSPAIIA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVN 124 + + ++ DP V G ++N++ + + ++L I+ EYG+N G V Sbjct: 59 KELAEKLN-DPFFTKVEAVGP-YVNVFFNRETVSDEVLKIILAEKEEYGQNHFGCEKTVV 116 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 I++ S N P +GH R ++G++L + GYEV YI D G Q L Sbjct: 117 IDYSSPNIAKPFSMGHLRSTMIGNSLKHIAEKCGYEVVGINYIGDWGTQFGKL 169 >gi|156103177|ref|XP_001617281.1| arginyl-tRNA synthetase [Plasmodium vivax SaI-1] gi|148806155|gb|EDL47554.1| arginyl-tRNA synthetase, putative [Plasmodium vivax] Length = 591 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 133/602 (22%), Positives = 242/602 (40%), Gaps = 117/602 (19%) Query: 43 GHLSTNAAMILSRPLGLD-----PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 GH N A+ + + G + ++++I+ I + + + + +GFI + LS Y Sbjct: 40 GHFQCNNALNIFKKYGKELNVENAQKLSQMIIENIS-ENFFEEIKSSPQGFITVKLSKEY 98 Query: 98 LRKIL----------SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 + K L S+ + ++ G + G +V ++F S N MHVGH R ++G Sbjct: 99 IEKSLLKLYKNNQIDISVDIDEVKGGND--GDYKRVLVDFSSPNIAKEMHVGHLRSTILG 156 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D++ + F + R +I D G Q + + + N ++PE L Sbjct: 157 DSICRIFEFLKVQTIRVNHIGDWGTQFGMIINHIVSTHP----NFKENMPE-LTNLTSLY 211 Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 K+L D ++++ K+Y++ K+ +D L + + S + Sbjct: 212 QEAKKLYD---------ADKEFEKSSKNYAI----KLQNNDEDCLFVWKKLCESS----K 254 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV------- 320 + I I+D + YV E S Q + +QLL + VGD + Sbjct: 255 KEFDKIYKILD--IKLEYVGESHYISMISPALQM--LKDEQLL---SNVGDAICYQSENF 307 Query: 321 DRPLL--KSDGSYTYFAADLA--YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV-AAAVS 375 + PL KS+G Y Y + D+A +++ K D +IYV +G + E + A Sbjct: 308 NVPLFLQKSNGGYGYDSTDVAAIHYRLKVLNS-DCLIYVTD---NGQLTHFETIFELAKK 363 Query: 376 EKKAQINVLLCEL-VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR----K 430 K A N L + L + K R+G I L ++++E G++ + +L R Sbjct: 364 AKWASENTKLVHVGFGLVLNADNKKFKTRSGTNIKLINLINE-GTERAKKDLLERIQLKS 422 Query: 431 NSELLDFDFCKVKEQSKENPVFYVQY-------------------------------AYA 459 E F + + S+E V ++Y AY+ Sbjct: 423 EEEKTYFKGIDIDQLSEELCVSAIKYFDLKQHRNTDYKFSYDNMLNVKGNTGLYIIYAYS 482 Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 R SIFR+ +D D ++ + S + E+ L +H+ ++P V + Sbjct: 483 RMCSIFRKC-----SVDMDELSKDELNLVSPY---EVNLGLHILKFPDVFYFVLKNMLIH 534 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 KLA Y YDL + F + EN ++ + + N K RL L S++ L ++G+ Sbjct: 535 KLAEYTYDLTTTFTAFY----ENCKV--LNSENEK---TRLILCAIAKSLLQICLGLLGM 585 Query: 580 ES 581 ++ Sbjct: 586 KA 587 >gi|189465272|ref|ZP_03014057.1| hypothetical protein BACINT_01618 [Bacteroides intestinalis DSM 17393] gi|189437546|gb|EDV06531.1| hypothetical protein BACINT_01618 [Bacteroides intestinalis DSM 17393] Length = 605 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 64/300 (21%), Positives = 123/300 (41%), Gaps = 62/300 (20%) Query: 324 LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 LL++DG+ Y D+ K ++ + D MIYV+G++ + + + L + + + + Sbjct: 330 LLRADGTSVYMTQDIGTAKLRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKGL 389 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416 V + +G KM R G + +++E Sbjct: 390 VHFSYGMVELPEG---KMKSREGTVVDADDLIEEMVNTAKETSNELGKLDGLTQEEADNI 446 Query: 417 ---VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 VG ++++ +L RKN E +DF+ N ++QY YAR +S+ Sbjct: 447 ARIVGLGALKYFILKVDARKNMTFNPKESIDFN---------GNTGPFIQYTYARIQSVL 497 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 R+A + + + IP E E LI +A++ V++ A P +A Y Sbjct: 498 RKAAEAGIAVPAE------IPVGIELSEKEEGLIQMVADFAAVVKQAGSDYSPSIIANYT 551 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 YDL ++ + ++ + + + RL L VA ++ G+ ++G+E P+ M Sbjct: 552 YDLVKEYNQFYHD------FSILREEDEAVKVFRLALSENVAKVVRLGMGLLGIEVPDRM 605 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 3/145 (2%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 ++ +++ + GHL+ L R P A+ I +K + + F KGF+N Sbjct: 27 QVQLQKTKKEFEGHLTLVVFPFL-RMSKKGPEQTAQEIGEYLKANEPSVAAFNVIKGFLN 85 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDT 149 L ++ S ++L++I +YG + V IE+ S N P+H+GH R ++G+ Sbjct: 86 LTIASSAWIELLNNIHADK-QYGITAATDHSPLVMIEYSSPNTNKPLHLGHVRNNLLGNA 144 Query: 150 LASLMAFSGYEVTREYYINDAGAQI 174 LA+++ +G +V + +ND G I Sbjct: 145 LANIVMANGNKVVKTNIVNDRGIHI 169 >gi|320590291|gb|EFX02734.1| arginyl-tRNA synthetase [Grosmannia clavigera kw1407] Length = 694 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 14/118 (11%) Query: 88 FINLYLSPSYLRKI-LSSIVVSGIEYGRNLI---------GKGTK-VNIEFVSANPTGPM 136 FI Y P L K+ L +I+ G +G + KG K + +EF S N P Sbjct: 188 FIQFYFKPGPLAKLTLPTILREGKAFGNDKTNGLQDPKDASKGRKRLVVEFSSPNIAKPF 247 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNN 192 H GH R ++G LA+L G++V R Y+ D G Q LAL+ + R+ ++AL N Sbjct: 248 HAGHLRSTIIGGFLANLHEGVGWDVVRINYLGDWGKQYGLLALA-YERFGDEEALSKN 304 Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust. Identities = 59/266 (22%), Positives = 106/266 (39%), Gaps = 51/266 (19%) Query: 349 FDNMIYVMGSDHSGYVKRLEAVA-----AAVSEKKAQINV--------------LLCELV 389 FD MIYV+ S ++K+L + +++K + +N L +++ Sbjct: 451 FDKMIYVVASAQDLHLKQLFKIVELMGYKEIADKCSHVNFGLVLGMSTRRGTVKFLDDIL 510 Query: 390 RLYRDGMPIKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-Q 445 R D M M + + + V D +G +V + K FD K+ + Sbjct: 511 RDVADKMHEVMKTNEVKYSQVENPEAVADVLGISAVMVQDMTGKRINNYTFDIAKMTSFE 570 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL------QLI 499 P Y+QYA+AR SI R++ DL+ DT+ L +I Sbjct: 571 GDTGP--YLQYAHARVCSIERRSGLSHSDLE-------------TADTTLLAEAHATNII 615 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 LA++P V++N EP + YL+ + + H + V + +L R Sbjct: 616 RLLAQWPDVVQNTLKTLEPTTVLTYLFKMTHALSSSYDHLQ-------VIGSEPELLKAR 668 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 + L A ++ +G+ I+G+ + M Sbjct: 669 MALYGAARIVLGNGMRILGLSPVDRM 694 >gi|153805808|ref|ZP_01958476.1| hypothetical protein BACCAC_00045 [Bacteroides caccae ATCC 43185] gi|149130485|gb|EDM21691.1| hypothetical protein BACCAC_00045 [Bacteroides caccae ATCC 43185] Length = 605 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 64/300 (21%), Positives = 122/300 (40%), Gaps = 62/300 (20%) Query: 324 LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 LL+ DG+ Y D+ K ++ + D MIYV+G++ + + + L + + + + Sbjct: 330 LLRGDGTSVYMTQDIGTAKLRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKSL 389 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416 V + +G KM R G + +++E Sbjct: 390 VHFSYGMVELPEG---KMKSREGTVVDADDLMEEMIATAKETSQELGKLDGLTQEEADDI 446 Query: 417 ---VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 VG ++++ +L RKN E +DF+ N ++QY YAR +S+ Sbjct: 447 ARIVGLGALKYFILKVDARKNMTFNPKESIDFN---------GNTGPFIQYTYARIQSVL 497 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 R+A + + IP E E LI +A++ V++ A P +A Y Sbjct: 498 RKAA------ESGIVVPGQIPAGIELSEKEEGLIQMVADFAAVVKQAGEDYSPSIIANYT 551 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 YDL ++ + ++ N + + R+ L VA ++ G++++G+E P+ M Sbjct: 552 YDLVKEYNQFYHD------FSILREENEAVKVFRIALSANVAKVVRLGMSLLGIEVPSRM 605 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 42/149 (28%), Positives = 76/149 (51%), Gaps = 13/149 (8%) Query: 32 IVIERPRDCAHGHLSTNAA--MILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 + I++ + GHL+ + +SR P A+ I +K++ + F KGF+ Sbjct: 28 VQIQKTKKEFEGHLTLVVFPFLKMSRK---GPEQTAQEIGEYLKVNEPAVAAFNVIKGFL 84 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK----VNIEFVSANPTGPMHVGHCRCAV 145 NL ++ + +L+ I +YG + K T+ V IE+ S N P+H+GH R + Sbjct: 85 NLTIASATWIDLLNEIQADE-QYG---LVKATETSPLVMIEYSSPNTNKPLHLGHVRNNL 140 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQI 174 +G+ LA+++A +G +V + +ND G I Sbjct: 141 LGNALANIVAANGNKVVKTNIVNDRGIHI 169 >gi|329572537|gb|EGG54187.1| arginine--tRNA ligase [Enterococcus faecalis TX1467] Length = 292 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 63/236 (26%), Positives = 101/236 (42%), Gaps = 46/236 (19%) Query: 326 KSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAV------------ 370 KSDG+ Y DLA Y K Y+ F +YV+G++ S + K+L+AV Sbjct: 55 KSDGATLYITRDLAAALYRKRTYD--FAKSLYVVGNEQSNHFKQLKAVLKELGFEWSDDM 112 Query: 371 -----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 +S +K +I VLL E++ +++++ D V +VG Sbjct: 113 EHIPFGLITQGGKKLSTRKGKI-VLLEEVLNEAVTLAGNQINEKNPDLANREEVAKQVGV 171 Query: 420 DSVRFMMLWRKNSELLDFDFC---KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 +V F L KN L +FDF V+ + + P YVQY +AR SI R+A Sbjct: 172 GAVIFHDL--KNDRLNNFDFVLDEVVRFEGETGP--YVQYTHARAMSILRKAN------- 220 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 F + + + D +++ L ++P + A EP +A + LA F Sbjct: 221 ---FTPDATQRYALNDKDSWEVVKLLQKFPETVMQAAEKYEPSVIAKHSIHLAQAF 273 >gi|71005906|ref|XP_757619.1| hypothetical protein UM01472.1 [Ustilago maydis 521] gi|46097112|gb|EAK82345.1| hypothetical protein UM01472.1 [Ustilago maydis 521] Length = 392 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 61/301 (20%), Positives = 116/301 (38%), Gaps = 57/301 (18%) Query: 326 KSDGSYTYFAADLAYFKCKYER-----GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 + DG+ Y D+A ++++ GFD MIYV+ S ++ + V + AQ Sbjct: 85 RKDGTPLYITRDIAEAAQRFDKSFDGNGFDKMIYVVASQQDLHLAQFFKVLELMGYPWAQ 144 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416 + + GM + MS R G + L +++DE Sbjct: 145 KETSRLQHINF---GMILGMSTRKGTVVFLDNILDETRDKMHEVMKANEAKYAQVEDPER 201 Query: 417 ----VGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKD- 470 VG +V+ + K +FD+ ++ + P Y+QY + R S+ R+AKD Sbjct: 202 TADIVGMTAVKIQDMSSKRINNYNFDWSRMLSFEGDTGP--YLQYNHVRLCSVERKAKDS 259 Query: 471 -----IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 DLD ++I + D L++ +A++P ++ A +P + Y Sbjct: 260 DGLELATADLDLSSINLDLISEPKARD-----LVMLIAQWPDTVKAAMKDHQPSTIVTYA 314 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L + W V+ + L + RL + ++ S L ++ + + Sbjct: 315 FRLTHLISSCWE-------FLLVKGQEKDLALARLFVFRCCKDVLGSALRLLTITPLEHL 367 Query: 586 S 586 S Sbjct: 368 S 368 >gi|332291119|ref|YP_004429728.1| arginyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5] gi|332169205|gb|AEE18460.1| arginyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5] Length = 592 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 14/133 (10%) Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 ++QY Y R ++I R+AK++ ++ I QE E +L+ + EYP I+ A Sbjct: 474 FIQYTYVRIQAILRKAKEMNVPVE--------IAQERTLHPKEKELLKIIQEYPATIQLA 525 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572 + P +A Y YDL ++ + +++ + +N + R+ L V +I S Sbjct: 526 AAQKSPAIIANYTYDLVKEYNSFFQ------QVQILGTDNIEDQSFRVALSKEVGLVIES 579 Query: 573 GLNIIGVESPNEM 585 +++G+E P M Sbjct: 580 AFSLLGIEVPERM 592 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 2/95 (2%) Query: 80 SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139 + F KGF+NL ++ S+ + I + +GR G V +E+ S N P+H+G Sbjct: 73 TAFNVVKGFLNLVIADSFYMSSFADIQAAE-NFGRTP-ESGKAVMVEYSSPNTNKPLHLG 130 Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 H R ++G +++ ++ +G +V + IND G I Sbjct: 131 HVRNVLLGYSVSEIIKAAGSKVYKTQIINDRGIHI 165 >gi|255689975|ref|ZP_05413650.1| arginine--tRNA ligase [Bacteroides finegoldii DSM 17565] gi|260624582|gb|EEX47453.1| arginine--tRNA ligase [Bacteroides finegoldii DSM 17565] Length = 605 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 65/303 (21%), Positives = 122/303 (40%), Gaps = 68/303 (22%) Query: 324 LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 LL+ DG+ Y D+ K ++ + D MIYV+G++ + + + L + + + + Sbjct: 330 LLRGDGTSVYMTQDIGTAKLRFADYPIDKMIYVVGNEQNYHFQVLSILLDKLGFEWGKSL 389 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE-------------------------- 416 V + +G KM R G + +++E Sbjct: 390 VHFSYGMVELPEG---KMKSREGTVVDADDLMEEMIATAKETSQELGKLDGLTQEEADDI 446 Query: 417 ---VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 VG ++++ +L RKN E +DF+ N ++QY YAR +S+ Sbjct: 447 ARIVGLGALKYFILKVDARKNMTFNPKESIDFN---------GNTGPFIQYTYARIQSVL 497 Query: 466 RQAKD---IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 R+A + + P+ IP E E LI +A++ V++ A P +A Sbjct: 498 RKAAESGIVVPEQ---------IPAGIELSEKEEGLIQMVADFAAVVKQAGEDYSPSIIA 548 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 Y YDL ++ + ++ N + + R+ L VA ++ G+ ++G+E P Sbjct: 549 NYTYDLVKEYNQFYHD------FSILREENEAVKVFRIALSANVAKVVRLGMGLLGIEVP 602 Query: 583 NEM 585 M Sbjct: 603 ARM 605 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 86/168 (51%), Gaps = 17/168 (10%) Query: 13 NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAA--MILSRPLGLDPLTIAELIVA 70 N LK + C +V +K++ +++ + GHL+ + +SR P A+ I Sbjct: 13 NGLKAL-CGQEVPEKMVQ---LQKTKKEFEGHLTLVVFPFLKMSRK---GPEQTAQEIGE 65 Query: 71 RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK----VNIE 126 +K + + F KGF+NL ++ + ++L+ I +YG + K T+ V IE Sbjct: 66 YLKANEPAVAAFNVIKGFLNLTIASATWIELLNEIQADE-QYG---LVKATETSPLVMIE 121 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 + S N P+H+GH R ++G+ LA+++A +G +V + +ND G I Sbjct: 122 YSSPNTNKPLHLGHVRNNLLGNALANIVAANGNKVVKTNIVNDRGIHI 169 >gi|311896743|dbj|BAJ29151.1| putative arginyl-tRNA synthetase [Kitasatospora setae KM-6054] Length = 498 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 35/56 (62%) Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 +G +V +E S NP PMH+G R ++G +LA L+ +G EV Y++ND G Q+ Sbjct: 75 RGRRVIVEHTSINPVHPMHLGALRSTLIGGSLARLLRSAGAEVRVHYFVNDHGRQV 130 >gi|327355532|gb|EGE84389.1| arginyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188] Length = 635 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 123/570 (21%), Positives = 219/570 (38%), Gaps = 120/570 (21%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTI---AELIVARIKIDPDVDSVFIAGKGFIN 90 I+R + AHG + A + + +D + + ++L + +P VFI Sbjct: 61 IQRTQVLAHGDVMVVVARLRLKGANVDQVALDLSSKLCGISLISNPVPKGVFIP------ 114 Query: 91 LYLSPSYL-----------RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139 ++ S + L R++ ++G++ N KV +EF S N H G Sbjct: 115 IFFSATTLPRLILPYIFDRRQLYGHDKIAGLKQPENEAAGKKKVIVEFSSPNIAKEFHAG 174 Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSDLP 197 H R ++G +A+L G++V + Y+ D G Q LA V W+ + L+ + Sbjct: 175 HLRSTIIGAYIANLYESMGWDVVKINYLGDWGKQFGLLA--VGWQKFGSEELFQKEP--- 229 Query: 198 EGYYPGVYLKHVGKELADKYSS-ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 LKH L D Y+ L PE++ +D Q +I + K L + Sbjct: 230 --------LKH----LLDVYAKINTLFKPEQEASKNARDNG-QDTSEI---ENKGLYAER 273 Query: 257 DIFISEDDFHRGDPSPI------RDI-ID---------NLARQGYVYEGILPPPKSKTTQ 300 + F + GDP + RDI I+ N+A Y E + P ++ + Sbjct: 274 NAFFKK--MEDGDPDALSLWRRFRDISIERYIRTYARLNIAFDEYSGESTVRPETIESVE 331 Query: 301 KCDMDRKQLLFR--------------STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346 K M +++ ++ + +G V R G+ TY D+A + Sbjct: 332 K--MLKEKGIYEENEGSWVIDFKKHGARKLGTAVVR---NRGGTTTYLLRDIAAVLERVG 386 Query: 347 R-GFDNMIYVMGSDHSGYVKRLEAVAAA-----VSEKKAQINV--------------LLC 386 + FD MIYV+ ++ Y +R+ ++ K +N LL Sbjct: 387 KYKFDKMIYVVSAEQDSYFQRVFKTIEIMGYPDIATKLVHVNFGKVQGMSSRLGTVKLLS 446 Query: 387 ELVRLYRDGMPIKMSKRAGDFITL---RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443 +++ + M M + + + V D VG +V + K FD ++ Sbjct: 447 DILDECGNAMHEVMRANEAKYAQVPDPKAVADVVGITAVMAQDMSGKRINNYAFDITRMT 506 Query: 444 E-QSKENPVFYVQYAYARCRSIFRQAK---DIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 + P Y+QY++AR SI R+A+ D DF L + + ++ Sbjct: 507 SFEGDTGP--YLQYSHARLCSIMRKAQLTADQVAKADFTLLK----------EPHAVDIV 554 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 +A+YP + +A EP + YL+ L Sbjct: 555 RLVAQYPDITSHAFKTLEPITVLTYLFRLT 584 >gi|311244166|ref|XP_003121341.1| PREDICTED: probable arginyl-tRNA synthetase, mitochondrial-like [Sus scrofa] Length = 275 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 68/129 (52%), Gaps = 11/129 (8%) Query: 54 SRP-LGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIE 111 SRP + + + +AE ++K D V S G+G +N ++ L K +L ++ G + Sbjct: 57 SRPDIQIQAMRLAE----KLKCD-TVVSEISTGQGTVNFKINRELLTKTVLQQVIEDGSK 111 Query: 112 YG-RNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167 YG ++ + G K+ +EF S N HVGH R ++G+ +A+L G++VTR Y+ Sbjct: 112 YGLKSELFSGLPQKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVTRINYL 171 Query: 168 NDAGAQINT 176 D G Q T Sbjct: 172 GDWGMQFVT 180 >gi|212544232|ref|XP_002152270.1| arginyl-tRNA synthetase, putative [Penicillium marneffei ATCC 18224] gi|210065239|gb|EEA19333.1| arginyl-tRNA synthetase, putative [Penicillium marneffei ATCC 18224] Length = 831 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 115/524 (21%), Positives = 195/524 (37%), Gaps = 102/524 (19%) Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167 S +E GR K+ IEF S N H R ++G +A+ G++VTR Y+ Sbjct: 148 SSLEAGRK------KLLIEFSSPNIASEFQARHLRSTILGAYIANQYENMGWDVTRLNYL 201 Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY-------------LKHVGKELA 214 D G + L ++ + L+ D P G+ +Y K + E Sbjct: 202 GDWGKPMGLLGVAWEKFGSEELFQAD---PAGHLHDIYHKILELFVPEQAASKKIRDEGG 258 Query: 215 DKYSSELLNFPEEK--WLPIVKDYSVQA--MMKIIRD-------DLKA-LNIQHDIFISE 262 D S E E+ + ++D QA + K RD DL A LN++ D + E Sbjct: 259 DPASIEGQGVFAERNAFFKRMEDDDEQAVALWKRARDVNIKNYTDLYARLNVRFDEYSGE 318 Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322 + +I L +G E S + D+ + + + ++ D Sbjct: 319 SQVRLETMMEVEEI---LKSRGISEE-------SAGSWMIDLKKHAKISGTAIIRDRT-- 366 Query: 323 PLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSD-HSGYVKRLEAV---------- 370 GS TY DLA + + FD MIYV+ +D H+ + RL + Sbjct: 367 ------GSSTYLLRDLAAVLERSRKYSFDKMIYVVAADQHTTHFSRLFKILELMDMSDLA 420 Query: 371 ----------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 + +SEK + L E++ ++ M L H + + S Sbjct: 421 NKLQHVQFSNVSKMSEKFGN-DRTLDEILDQFQKAMCESFKIHPEMASLLGHSEESIFSI 479 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVF--YVQYAYARCRSIFRQAKDIFPDLDFD 478 ++ ++ +S+ + +V + P Y+QY YAR +I D Sbjct: 480 AISALVAGELSSKRAQDNAFEVTRMTSFEPGTGPYLQYWYARLCTIL------------D 527 Query: 479 LFPRNVIPQESEFDT---SELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + ++ P E EFDT + L+ L ++P + A + EP + YL +LA Sbjct: 528 AYETSIKPSEEEFDTLSDEDFSLLRLLVQFPDITHLAYESLEPATVMAYLVNLAVQLEVC 587 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 + N QAN L A ++ SG+ ++G+ Sbjct: 588 FDECENNVANNLTQAN----------LYEATRRVMESGMKLLGI 621 >gi|194246825|ref|YP_002004464.1| Arginyl-tRNA synthetase [Candidatus Phytoplasma mali] gi|193807182|emb|CAP18623.1| Arginyl-tRNA synthetase [Candidatus Phytoplasma mali] Length = 565 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 125/541 (23%), Positives = 223/541 (41%), Gaps = 92/541 (17%) Query: 87 GFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 GF+N+ L+ + L K IL +IV S +YG T V +++ S N +GH R V Sbjct: 75 GFLNIKLNRNLLTKNILLNIVDSKDKYGSKEYNNQTIV-LDYSSPNIAKNFSIGHLRSTV 133 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV--FWRYQQALYNNDSDLPEGYYPG 203 +G+ L ++ G++ ++ D G Q L L+ + +++ L + ++L + Y Sbjct: 134 IGNALKNIYQKLGFKTISINHLGDWGTQFGKLILAYKKWGNHKKVLEDPMNELQKLY--- 190 Query: 204 VYLKHVGK--ELADKYSSELLNFPEEK-------WLPIVKDYSVQAMMKIIRDDLKALNI 254 V+ K ++ +S+L E+K W + K+ S++ KI DL L I Sbjct: 191 VFFHEQAKINPKLNQEASDLFYQLEQKNEELIGLW-KLFKEISLKEFHKIY--DL--LGI 245 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 + D +I E Y +P + QK + Q + T Sbjct: 246 KFDYYIGES----------------------FYNDQIPDLILELKQKKLLKLDQNAYIVT 283 Query: 315 MVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA 371 + +D+ P L K +GS Y D+A ++ F ++YV+G++ + ++L+ V Sbjct: 284 L--NDMLPPALIQKKNGSTVYLTRDIAALLYRFRHYNFSKILYVVGNEQKLHFQQLKQVV 341 Query: 372 AAVSEKKAQINV----LLCELVRL-YRDGMPIKM-------SKRAGDFITLRH------- 412 + +N+ +L + +L R IK+ K A IT+++ Sbjct: 342 FKMGYDIDLVNINFGLILFKGKKLSTRFQKTIKLIDVIEQIKKLAKKIITIKNPNLLNIE 401 Query: 413 -VVDEVGSDSVRFMMLWRKNSELLDFDF-CKVKEQSKENPVFYVQYAYARCRSIFRQA-- 468 + +++ S+ F L KN+ LD DF + Q + Y+QY R SI + Sbjct: 402 DISNKIAIGSIIFNDL--KNNRHLDIDFDIERMIQFEGQTGSYLQYTCVRINSILEKIKK 459 Query: 469 ----KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 + ++ +L+ I S LI L + ++E I P LA Y Sbjct: 460 EKKKQIVWHELE--------INNNSYLKEHYFILIKLLDRFSLILEQTKIENMPSILARY 511 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 L +A F+ +S + +Q N L LV +V I+ GL ++G+ N+ Sbjct: 512 LLKIAKKFNHFYSKEKIITSQIILQNTN-------LLLVQSVFIILKEGLRLLGIPLLNK 564 Query: 585 M 585 M Sbjct: 565 M 565 >gi|242783546|ref|XP_002480208.1| arginyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500] gi|218720355|gb|EED19774.1| arginyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500] Length = 641 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 19/141 (13%) Query: 89 INLYLSPSYLRK-ILSSIVVSGIEYGRNL-IG--------KGTK-VNIEFVSANPTGPMH 137 + + P+ L K ++S I+ + YG N +G KG K + +EF S N P H Sbjct: 119 LQFFFKPAPLTKTVISRILENKSTYGTNGNLGLRDPSDPSKGKKKMIVEFSSPNIAKPFH 178 Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY--QQALYNNDSD 195 GH R ++G LA+L +G+EV + Y+ D G Q LA + F RY ++AL + Sbjct: 179 AGHLRSTIIGGFLANLFTITGWEVIKMNYLGDWGKQYGLLA-NGFERYGSEEALTKD--- 234 Query: 196 LPEGYYPGVYLKHVGKELADK 216 P + VY+K + K++A++ Sbjct: 235 -PINHLFDVYVK-INKDMAEQ 253 Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust. Identities = 30/127 (23%), Positives = 64/127 (50%), Gaps = 14/127 (11%) Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 Y+QYA+AR SI R+A +++ + P+ + +E + + L +LA++P V+ N Sbjct: 503 YLQYAHARLCSILRKA-----EINVEDLPKANLSLLTE--SHAIDLARYLAQWPDVVLNT 555 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572 EP + YL+ + + + LR V ++L + R+ L + ++++ Sbjct: 556 VKTLEPTTVLTYLFRMTHMLSSSYD------ILRIV-GREQELALARMALYESARQVLHN 608 Query: 573 GLNIIGV 579 G+ ++G+ Sbjct: 609 GMKLLGL 615 >gi|94969059|ref|YP_591107.1| arginyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345] gi|94551109|gb|ABF41033.1| arginyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345] Length = 647 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 7/146 (4%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 L +V++ P G + + L++ L P IAE + + + +AG G+ Sbjct: 25 LPTLVVDAPPKVEMGEYALPFSFELAKRLRKAPRKIAEEVATELPPIEGFEKPEVAGAGY 84 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 IN L R ++ + G + K+ +E S NP H+GH R +++GD Sbjct: 85 INFRLK----RGDAATALAKG---ESTPVTHDGKILVEHTSINPNKAAHIGHLRNSILGD 137 Query: 149 TLASLMAFSGYEVTREYYINDAGAQI 174 T L+ +G V + YI++ G Q+ Sbjct: 138 TFVRLLRAAGRTVDIQNYIDNTGVQV 163 >gi|327349062|gb|EGE77919.1| arginyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188] Length = 710 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 22/173 (12%) Query: 58 GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNL 116 G P + +V + + + ++G + Y P L K ++SSI + YG N Sbjct: 146 GRKPAEVTAQLVENLPPSDLIGTPVVSGT-HVQFYFKPEPLTKTVISSIQKNRATYGTNA 204 Query: 117 -IG--------KGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166 +G KG K + +EF S N P H GH R ++G LA+L G++V + Y Sbjct: 205 NVGLRDPADPSKGKKKIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLHTVMGWDVVKMNY 264 Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLKHVGKELADK 216 + D G Q LA Y++ Y N+ +L P + VY+K + K++A++ Sbjct: 265 LGDWGKQYGLLANG----YEK--YGNEEELVKDPINHLFDVYVK-INKDVAEQ 310 >gi|167044615|gb|ABZ09287.1| putative DALR anticodon binding domain protein [uncultured marine crenarchaeote HF4000_APKG7F19] Length = 543 Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 39/63 (61%) Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 YG IGK +K+ +E S NP +H+GH R +GD ++ +++ + Y+V YI+D+G Sbjct: 26 YGSIDIGKNSKLVVEHTSVNPNKALHIGHLRNVAIGDAVSRILSKANYDVKVLNYIDDSG 85 Query: 172 AQI 174 Q+ Sbjct: 86 LQV 88 Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust. Identities = 39/180 (21%), Positives = 78/180 (43%), Gaps = 16/180 (8%) Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 D +L + V ++R+ ++ +++ FD + + Y+QY+ R I Sbjct: 380 DNASLCEIAHNVAVGTIRYELIKPDLGKIITFDI-NTSLKLDGDTCSYIQYSCVRALRIL 438 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 ++ + P+ D N +E++TS LI + + + +A P +A Y Sbjct: 439 EKSGN-EPNFDVQFDQLN-----TEYETS---LIKQIGLFEVFVNDAAKNYSPKVIAKYC 489 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 YDLA F + H ++ ++A +L RL LV + + L+++G+ +P M Sbjct: 490 YDLAVAFSSFYEH------VKVLKAETPELINARLCLVLSFKLTLEKALDLLGITAPQRM 543 >gi|302345955|ref|YP_003814308.1| arginine--tRNA ligase [Prevotella melaninogenica ATCC 25845] gi|302150153|gb|ADK96415.1| arginine--tRNA ligase [Prevotella melaninogenica ATCC 25845] Length = 606 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 67/301 (22%), Positives = 120/301 (39%), Gaps = 63/301 (20%) Query: 324 LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 LL+ DG+ Y D+ + ++ + D MIYV+G++ + + + L + + K + Sbjct: 330 LLRKDGTSVYMTQDIGTAEMRFNDYPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKDL 389 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFI----------------------TLRHVVDE---- 416 V + +G KM R G + L + +E Sbjct: 390 VHFSYGMVELPNG---KMKSREGTVVDADDLVASMIENAKSLSEDKVNKLEGITEEEKNE 446 Query: 417 ----VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 VG ++++ +L RKN E +DF+ N ++QY YAR RSI Sbjct: 447 IARIVGMGALKYFILKVDARKNMLFNPEESIDFN---------GNTGPFIQYTYARIRSI 497 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R+A+ L L ++ + E+ LI L ++ + A I P +A Y Sbjct: 498 LRKAEAQNITLPASL------NDDAPLNEKEIALIQKLNDFGAAVAQAGIDYSPSGIANY 551 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 Y+L F+ + + A+ + RL + VA +I +G+ ++G+E P Sbjct: 552 CYELTKEFNQFYHD------YSILNADTEAEKITRLMIAKNVAKVIKNGMALLGIEVPER 605 Query: 585 M 585 M Sbjct: 606 M 606 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 48/89 (53%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 KGF+NL ++ + ++L+ I + + + V IE+ S N P+H+GH R + Sbjct: 81 KGFLNLVIAQAAWTELLNDINADEKFGEKRVTDESPLVMIEYSSPNTNKPLHLGHVRNNL 140 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQI 174 +G +LA +M +G +V + +ND G I Sbjct: 141 LGWSLAQIMEANGNKVVKTNIVNDRGIHI 169 >gi|282861109|ref|ZP_06270174.1| DALR anticodon binding domain protein [Streptomyces sp. ACTE] gi|282563767|gb|EFB69304.1| DALR anticodon binding domain protein [Streptomyces sp. ACTE] Length = 386 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 27/147 (18%) Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 Q++ NP+F V+YA+AR R++ R A+ L F E D L LA+ Sbjct: 261 QTEANPLFLVRYAHARARALTRGAE----QLGFT--------GAYEQDVDAPALHAALAD 308 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVF------HGHWSHGRENPRLRFVQANNRKLTMM 558 +P V+ +A P +LA +L +A F G G E P A +R Sbjct: 309 HPGVLASAARHHAPDRLARHLESVARAFFDLHDTAGPLPVGDEKP-----SAAHRS---- 359 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 RL L A +++ GL+++G+ +P + Sbjct: 360 RLALAEAAGTVLAGGLSLLGISAPRHL 386 Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust. Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 14/161 (8%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 AD S + + ++ + + + R+ +ER R G + A+ L+ P L + Sbjct: 32 ADLSRTVLHAVRRAVDEDALRAPVPARVRVERTRPGGSGDYACAVALQLAGPAALPAREV 91 Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVS----GIEYGRNLIGKG 120 A ++ R+ P V V I G GF+N L +S+V + G +YG + G Sbjct: 92 ARILRDRVAAAPGVGHVEITGPGFLNFTLDAPADADARASVVRAVLDRGPQYGHVTVDNG 151 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161 T + H R AV+ T+ L+ G +V Sbjct: 152 TLHRLH----------HPPEVRAAVLARTVGHLLRAQGGQV 182 >gi|315224424|ref|ZP_07866254.1| arginine--tRNA ligase [Capnocytophaga ochracea F0287] gi|314945627|gb|EFS97646.1| arginine--tRNA ligase [Capnocytophaga ochracea F0287] Length = 631 Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 2/123 (1%) Query: 53 LSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE 111 L R + +P+ I E I +K D+ + F KGF+NL ++ SY L V + + Sbjct: 81 LLRHIKGNPVQIGEQIGGYLKEKAGDLVTDFNVIKGFLNLVIADSYYIDFLKE-VKNNPQ 139 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 +G + +E+ S N P+H+GH R ++G ++A ++ +G++V + IND G Sbjct: 140 FGLATPNSKEAILVEYSSPNTNKPLHLGHIRNNLLGYSVAEILKAAGHKVYKTQIINDRG 199 Query: 172 AQI 174 I Sbjct: 200 IHI 202 Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust. Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 24/139 (17%) Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRN--VIPQESEFDTSELQLIVHLAEYPRVIE 510 ++QY YAR +SI R+ ++ RN I + + E L+ + +P V++ Sbjct: 511 FIQYTYARIQSIMRKYT--------EMGGRNEAAIEKVNGLHEKEKALLKSITLFPSVVQ 562 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAV 566 +A + P +A Y+YDL F+ + + G E R R+ L + Sbjct: 563 DAADSYSPAIIANYVYDLVKDFNSFYQNVSILGEEEESKR----------DFRVMLSKKI 612 Query: 567 ASIINSGLNIIGVESPNEM 585 II ++G++ P M Sbjct: 613 GEIIAESFKMLGIQVPERM 631 >gi|86133816|ref|ZP_01052398.1| Arginyl-tRNA synthetase [Polaribacter sp. MED152] gi|85820679|gb|EAQ41826.1| Arginyl-tRNA synthetase [Polaribacter sp. MED152] Length = 591 Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 19/134 (14%) Query: 453 YVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511 ++QY YAR +SI R+A+ D + DL + E +L+ LA +P I+ Sbjct: 476 FIQYTYARIQSIIRKAEFDYSNSVTIDLHEK------------EKELLKQLALFPETIQQ 523 Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571 A P +A Y YDL F+ + + + + N+ + R+QL VA I Sbjct: 524 AASNYSPAVIANYTYDLVKEFNSFYQN------VSILGEENQDKKIFRVQLSKKVADTIK 577 Query: 572 SGLNIIGVESPNEM 585 +++G++ P M Sbjct: 578 IAFSLLGIQVPERM 591 Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 2/90 (2%) Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCA 144 KGF+NL +S ++ +SI +G + K + +E+ S N P+H+GH R Sbjct: 79 KGFLNLVISDAFYLDFFNSIYKDE-NFGTAAAKEDEKAIMVEYSSPNTNKPLHLGHVRNN 137 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQI 174 ++G +++ ++ +G +V + IND G I Sbjct: 138 LLGFSVSEIIKAAGKKVYKTQIINDRGIHI 167 >gi|291333570|gb|ADD93264.1| hypothetical protein [uncultured archaeon MedDCM-OCT-S08-C92] Length = 252 Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 62/277 (22%), Positives = 117/277 (42%), Gaps = 50/277 (18%) Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 Y D+AY K+ R F+ + ++G DH L + K + L V L Sbjct: 2 YTTRDIAYHLNKFTR-FNKALNILGEDHKLQSNLLNIALEELGSNKP--DNLFYSFVNLP 58 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEV------------GSDSVRFMMLWRKNSELLDFDFC 440 KMS RAG + L ++D++ SD+ + ++ + L ++ Sbjct: 59 GG----KMSTRAGRVVYLDDMMDQIVDASLERLREVDMSDNQKRLLSEKIGIGSLRYNVL 114 Query: 441 KVKEQS------------KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488 KV+ + + + + Y++AR SI R+ + P+ D Sbjct: 115 KVQPEKGFTFSIDDALSIQGDSAPFAMYSHARMSSILRRYEASIPNSKLD---------- 164 Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548 S+ SE++LI +A++P+ +E+A + + Y++ L+S F+ + + + Sbjct: 165 SDLVESEIELIRTMAKWPKTVESAVDKFAIHIIPNYVHQLSSKFNNFYRD------CKVI 218 Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 N L R+ LV + I+ L+I+GVE+P+ M Sbjct: 219 GDTNEAL---RINLVSSSKRILFDALDILGVEAPDRM 252 >gi|329572536|gb|EGG54186.1| arginine--tRNA ligase domain protein [Enterococcus faecalis TX1467] Length = 196 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 39/169 (23%), Positives = 83/169 (49%), Gaps = 7/169 (4%) Query: 25 EKKILDRI--VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVF 82 E+ +D+I ++E P+ HG ++ A L++ P IA + +I + + + Sbjct: 17 EELTMDQIEQLLENPKSVDHGDVAF-PAFSLAKIYRKAPQQIAAELAEKID-GTNFEKIE 74 Query: 83 IAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 + G ++N +++ + + ++ +V YG + G V I+ S N P+ +GH Sbjct: 75 VVGP-YLNFFMNKEAVSQAVIGEVVKEKNNYGNSTFGNNGNVPIDMSSPNIAKPISMGHL 133 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQAL 189 R V+G+++A ++ GY+ R ++ D G Q L ++ W ++A+ Sbjct: 134 RSTVIGNSIAFILEKIGYQPIRINHLGDWGTQFGKLIVAYKKWGSEEAV 182 >gi|260593384|ref|ZP_05858842.1| arginine--tRNA ligase [Prevotella veroralis F0319] gi|260534660|gb|EEX17277.1| arginine--tRNA ligase [Prevotella veroralis F0319] Length = 606 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 69/301 (22%), Positives = 120/301 (39%), Gaps = 63/301 (20%) Query: 324 LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 LL+ DG+ Y D+ + ++ + D MIYV+G++ + + + L + + K + Sbjct: 330 LLRKDGTSVYMTQDIGTAEMRFNDFPIDKMIYVVGNEQNYHFQVLSILLDRLGFKWGKDL 389 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVV-----------------------DE--- 416 V + +G KM R G + +V DE Sbjct: 390 VHFSYGMVELPNG---KMKSREGTVVDADDLVASMIENAKTLSEDKVNKLEGITEDEKNE 446 Query: 417 ----VGSDSVRFMML---WRKN-----SELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 VG ++++ +L RKN E +DF+ N ++QY YAR RSI Sbjct: 447 IARIVGMGALKYFILKVDARKNMLFNPEESIDFN---------GNTGPFIQYTYARIRSI 497 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R+A+ L L ++ + E+ LI L ++ + A I P +A Y Sbjct: 498 LRKAEAQSIALPASL------TDDAPLNEKEIALIQKLNDFGAAVAQAGIDYSPSGIANY 551 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 Y+L F+ + + A+ + RL L VA +I +G+ ++G+E P Sbjct: 552 CYELTKEFNQFYHD------YSILNADTEAEKITRLVLAKNVAKVIKNGMALLGIEVPER 605 Query: 585 M 585 M Sbjct: 606 M 606 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 3/144 (2%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 I +++ R G+L T L + P A+ I +K + + F KGF+NL Sbjct: 28 IQLQKTRSDFEGNL-TLVTFPLLKTSHKKPEDTAQEIGEYLKKNCKAIADFNVVKGFLNL 86 Query: 92 YLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTL 150 ++ + +L+ I + ++G + + + V IE+ S N P+H+GH R ++G +L Sbjct: 87 VIAQAAWVGLLNDINANE-KFGEKSVTENSPLVMIEYSSPNTNKPLHLGHVRNNLLGWSL 145 Query: 151 ASLMAFSGYEVTREYYINDAGAQI 174 A +M +G +V + +ND G I Sbjct: 146 AQIMEANGNKVVKTNIVNDRGIHI 169 >gi|145631015|ref|ZP_01786791.1| arginyl-tRNA synthetase [Haemophilus influenzae R3021] gi|144983482|gb|EDJ90958.1| arginyl-tRNA synthetase [Haemophilus influenzae R3021] Length = 321 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 64/304 (21%), Positives = 112/304 (36%), Gaps = 58/304 (19%) Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY--------VKRLE 368 GD + + K DG + Y D+A K +YE N V ++ Sbjct: 41 GDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKANRTLVFSDTRQSQHMQQAWLITRKAG 100 Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------ 416 V + S + ++L +DG P K R G + L ++DE Sbjct: 101 YVPDSFSLEHKNFGMMLG------KDGKPFKT--RTGGTVKLADLLDEAIERATVLINEK 152 Query: 417 ---------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461 +G SV++ L + + FD+ + + N Y+QYAY R Sbjct: 153 NTNLSNDEKQAVIEAIGIGSVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRI 211 Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 RSIF + + P + D E L + L ++ ++ P+ L Sbjct: 212 RSIFNKTE--INSTALLAAPLTIK------DDKERTLAIKLLQFEEAVQTVGKEGTPHVL 263 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 YLY+LA +F + H + A + + + RL+L + GL ++G+++ Sbjct: 264 CAYLYELAGIFSSFYEH------CPILNAEDEAVKLSRLKLALLTEKTLKQGLALLGIKT 317 Query: 582 PNEM 585 +M Sbjct: 318 VEKM 321 >gi|256819031|ref|YP_003140310.1| arginyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271] gi|256580614|gb|ACU91749.1| arginyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271] Length = 597 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 2/123 (1%) Query: 53 LSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE 111 L R + +P+ I E I +K D+ + F KGF+NL ++ SY L V + + Sbjct: 47 LLRHIKGNPVQIGEQIGGYLKEKAGDLVTDFNVIKGFLNLVIADSYYIDFLKE-VKNNPQ 105 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 +G + +E+ S N P+H+GH R ++G ++A ++ +G++V + IND G Sbjct: 106 FGLATPNSKEAILVEYSSPNTNKPLHLGHIRNNLLGYSVAEILKAAGHKVYKTQIINDRG 165 Query: 172 AQI 174 I Sbjct: 166 IHI 168 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 24/139 (17%) Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRN--VIPQESEFDTSELQLIVHLAEYPRVIE 510 ++QY YAR +SI R+ ++ RN + + S E L+ + +P V++ Sbjct: 477 FIQYTYARIQSIMRKYA--------EMGGRNEAAVEKVSGLHEKEKALLKSITLFPSVVQ 528 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAV 566 +A + P +A Y+YDL F+ + + G E R R+ L + Sbjct: 529 DAADSYSPAIIANYVYDLVKDFNSFYQNVSILGEEEESKR----------DFRVMLSKKI 578 Query: 567 ASIINSGLNIIGVESPNEM 585 II ++G++ P M Sbjct: 579 GEIIAESFKMLGIQVPERM 597 >gi|296816723|ref|XP_002848698.1| arginyl-tRNA synthetase [Arthroderma otae CBS 113480] gi|238839151|gb|EEQ28813.1| arginyl-tRNA synthetase [Arthroderma otae CBS 113480] Length = 591 Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 69/287 (24%), Positives = 106/287 (36%), Gaps = 73/287 (25%) Query: 333 YFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA-----AVSEKKAQINVLLC 386 Y D+A + E+ FD MIYV+ ++ Y +RL VS K IN Sbjct: 330 YLLRDIAAVLERVEKYKFDKMIYVVSTEQDLYFQRLFKTIELMGHPEVSSKLEHINF--- 386 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD---------- 436 G MS R G L ++DE GS M RKN D Sbjct: 387 --------GKVQGMSSRLGTVKLLGDILDECGSAMHDVM---RKNPSKYDQVENPTWVAD 435 Query: 437 ---------------------FDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 FD K+ + P Y+QYA+AR SI R+ D Sbjct: 436 VLGITAVMVQDMAGKRIHNYPFDIAKMTSFEGDTGP--YLQYAHARLCSIVRKVNIDLKD 493 Query: 475 L---DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 + DF L +T + ++ + +YP V NA EP + YL+ LA Sbjct: 494 ITAADFSLLK----------ETHAISILRLMTQYPEVTNNALKTLEPTTILTYLFRLAHQ 543 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 + ++ + A + ++T+ RL L ++ +G+ ++G Sbjct: 544 VSSGYD------VIKVIGAESHEVTVARLALYEGARQVLENGMRLLG 584 >gi|315051012|ref|XP_003174880.1| arginyl-tRNA synthetase [Arthroderma gypseum CBS 118893] gi|311340195|gb|EFQ99397.1| arginyl-tRNA synthetase [Arthroderma gypseum CBS 118893] Length = 645 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 54/131 (41%), Gaps = 10/131 (7%) Query: 58 GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL- 116 G P IA I A+ V+ + G Y ++ SI+ + YG N Sbjct: 82 GKKPQEIAADIAAKFPKSDLVEPPVVVGAHLQFFYSHKPMTENVIRSILANKDAYGSNPN 141 Query: 117 --------IGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167 KG K V +EF S N P H GH R ++G +A+L G+EV + Y+ Sbjct: 142 VGLRDQRDASKGKKKVVVEFSSPNIAKPFHAGHLRSTIIGGFIANLYTVLGWEVLKINYL 201 Query: 168 NDAGAQINTLA 178 D G Q LA Sbjct: 202 GDWGKQYGLLA 212 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 65/291 (22%), Positives = 118/291 (40%), Gaps = 62/291 (21%) Query: 324 LLKSDGSYTYFAADLAYF-KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 +++ DG+ Y D+A + E FD MIYV+ + ++ +L V +K Sbjct: 377 VIRKDGTPLYLTRDIAAIVERDDEYKFDKMIYVVAAQQELHLAQLFKTTELVGKKDLASR 436 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN----------- 431 CE + GM MS R G L ++ +VG M +KN Sbjct: 437 ---CEHISF---GMVRGMSTRKGTVKFLNDILKDVGEKMHEVM---QKNQTKYEQIEDPV 487 Query: 432 --SELLDFDFCKVKEQSK----------ENPVF-------YVQYAYARCRSIFRQAKDIF 472 +++L V++ S EN Y+QYA+AR S+ R+A +I Sbjct: 488 ATADVLGITSVMVQDMSGKRINGYEFNLENMTSFEGDTGPYLQYAHARVCSVTRKA-EIK 546 Query: 473 PD----LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 P+ D L ++ + LI LA++P V+ NA+ EP + YL+ + Sbjct: 547 PEELGGADLSLLT----------ESHAIDLIRLLAQWPDVVFNASKTLEPCTILTYLFRM 596 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 + + V + ++ M R+ L + ++++G+ ++G+ Sbjct: 597 THTLSSGYD-------VLKVVGSEPEVKMARMALYESARQVLHNGMRLLGL 640 >gi|88802725|ref|ZP_01118252.1| arginyl-tRNA synthetase [Polaribacter irgensii 23-P] gi|88781583|gb|EAR12761.1| arginyl-tRNA synthetase [Polaribacter irgensii 23-P] Length = 601 Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 17/133 (12%) Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 ++QY YAR +SI R+A +FD + + E +L+ L YP I+ A Sbjct: 486 FIQYTYARIQSIVRKA-------NFDYSKVVAV----DLHEKEKELLKQLELYPATIQQA 534 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572 + P +A Y YDL F+ + + + + + + R+QL VA I S Sbjct: 535 AASYSPAVIANYTYDLVKEFNSFYQN------VSILGEEDLDKKIFRVQLAKKVADTIKS 588 Query: 573 GLNIIGVESPNEM 585 +++G+E P M Sbjct: 589 AFSLLGIEVPERM 601 Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 28/50 (56%) Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 +E+ S N P+H+GH R ++G +A + SG +V + IND G I Sbjct: 118 VEYSSPNTNKPLHLGHVRNNLLGYAVAEITKASGKKVYKTQIINDRGIHI 167 >gi|295094320|emb|CBK83411.1| arginyl-tRNA synthetase [Coprococcus sp. ART55/1] Length = 419 Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 3/138 (2%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112 L++ L P IA I I ++ + +AG ++N Y+ K + + ++ Sbjct: 43 LAKVLRKAPNMIAADIKEAIGDVDFIEKIDVAG-AYLNFYIKKDVFVKTMIEAANTD-DF 100 Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172 G++ IG+G + I++ S N HVGH R ++G++L + + GY V R ++ D G Sbjct: 101 GKSDIGEGQTICIDYSSPNVAKNFHVGHLRTTIIGNSLYKIHSKLGYNVVRINHLGDWGT 160 Query: 173 QINTLALSV-FWRYQQAL 189 Q L ++ W ++A+ Sbjct: 161 QFGKLIVAYKAWGSKEAV 178 >gi|297596142|ref|NP_001042078.2| Os01g0158500 [Oryza sativa Japonica Group] gi|255672893|dbj|BAF03992.2| Os01g0158500 [Oryza sativa Japonica Group] Length = 80 Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 36/61 (59%) Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 ++F S N MHVGH R ++GDTLA + F+ EV R ++ D G Q+ L + +F + Sbjct: 20 LDFSSPNIAKEMHVGHIRSTIIGDTLAHMFEFTNVEVLRRNHVGDWGTQVLNLNVLIFKQ 79 Query: 185 Y 185 + Sbjct: 80 F 80 >gi|315304822|ref|ZP_07874977.1| arginyl-tRNA synthetase [Listeria ivanovii FSL F6-596] gi|313626812|gb|EFR95790.1| arginyl-tRNA synthetase [Listeria ivanovii FSL F6-596] Length = 109 Score = 53.5 bits (127), Expect = 9e-05, Method: Composition-based stats. Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 16/124 (12%) Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 RS Q D+ D D L + E+E+D L+ L E+ V+ A + + P+++ Sbjct: 2 RSGKEQNLDVSKDADMSL-----LQTEAEYD-----LLKVLGEFADVVAEAAVKRAPHRI 51 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 YL DLAS FH ++ + + +N ++T RL L+ + +GL ++GV + Sbjct: 52 VRYLNDLASAFHRFYNSN------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSA 105 Query: 582 PNEM 585 P +M Sbjct: 106 PEKM 109 >gi|258565281|ref|XP_002583385.1| arginyl-tRNA synthetase [Uncinocarpus reesii 1704] gi|237907086|gb|EEP81487.1| arginyl-tRNA synthetase [Uncinocarpus reesii 1704] Length = 699 Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 126/581 (21%), Positives = 218/581 (37%), Gaps = 173/581 (29%) Query: 98 LRKILSSIVVSGIEYGRNL-IG--------KGTK-VNIEFVSANPTGPMHVGHCRCAVVG 147 ++ ++ SI+ + YG N IG +G K + +EF S N P H GH R ++G Sbjct: 123 IKTVIPSILKNKATYGTNANIGLRDPRDPSQGKKRIVVEFSSPNIAKPFHAGHLRSTIIG 182 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGV 204 F G E + + +W +Y N+ +L P + V Sbjct: 183 -------GFPG-EFAHSLWDGNMA----------YWPNGYKMYGNEEELLKDPINHLFEV 224 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD---DLKALNIQHDIFI- 260 Y+K + K++A++ +KD ++ +K+I+D D AL + D + Sbjct: 225 YVK-INKDVAEQEGP-------------IKD--LKERIKVIKDKGEDAAALEKELDTLVA 268 Query: 261 -SEDDFHR--------GDPSPI------RDIIDNLARQGY--------VYEGILPPPKSK 297 S D+ R GD + RD+ RQ Y VY G +S+ Sbjct: 269 ASWDEKARQYFRSMEDGDEDALALWRRFRDLSITKYRQTYARLNIDFDVYSG-----ESQ 323 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLL-----------------KSDGSYTYFAADLA- 339 Q+ + + V +D + ++ + DG+ Y D+A Sbjct: 324 VKQES-LSTVYNTMQEKGVSEDSEGAIIVDFTKHGAKKLGKAIVVRKDGTPLYLTRDIAA 382 Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399 F+ + FD M+YV+ + ++ +L + K L + + GM Sbjct: 383 IFERETAFNFDKMLYVVAAQQDLHLAQLFKTVELMGRKD------LADKCQHINFGMVRG 436 Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF------- 452 MS R G L ++ +VG M RKN+ VK + ENPV Sbjct: 437 MSTRKGTVKFLNDILKDVGDKMHEVM---RKNA---------VKYEQVENPVETADTLGI 484 Query: 453 --------------------------------YVQYAYARCRSIFRQAKDIFPDL--DFD 478 Y+QYA+AR S+ R+A +I P + D Sbjct: 485 TSVMVQDMSGKRINGYEFNLEDMTSFEGDTGPYLQYAHARLCSVTRKA-EIDPAVLGSAD 543 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L +++ + D + L L+++P V+ NA EP + YL+ + S Sbjct: 544 L---SLLTESHAVDLARL-----LSQWPDVVLNAMKTLEPTTIITYLFRMTHTL----SS 591 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 G E + V + +L R+ L H ++N+G+ ++G+ Sbjct: 592 GYETLK---VVGSEPELKKARMALYHCARQVLNNGMRLLGL 629 >gi|149371672|ref|ZP_01891088.1| arginyl-tRNA synthetase [unidentified eubacterium SCB49] gi|149355299|gb|EDM43859.1| arginyl-tRNA synthetase [unidentified eubacterium SCB49] Length = 593 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 13/133 (9%) Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 ++QY +AR +SI R+ + D+ V Q+ + E +++ L ++P IE A Sbjct: 474 FIQYTFARIQSIIRKGNN-------DVTLSAVEIQDYSLEPKEKEVLKSLQQFPSTIELA 526 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572 P +A Y YDL F+ + + + A N R+ L AV +I + Sbjct: 527 AANYSPAVIANYTYDLVKEFNSFYQN------VPIFSAENETEVKFRVALCAAVGDVIKT 580 Query: 573 GLNIIGVESPNEM 585 ++G++ P M Sbjct: 581 AFGLLGIDVPERM 593 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 4/116 (3%) Query: 60 DPLTIAELIVARIKIDPDVDSV-FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +P+ I E I + +D + V F KGF+N+ LS ++ ++ +G G Sbjct: 53 NPVQIGEAI-GQYLVDNVAEVVRFNVVKGFLNIVLSDAHFLDFFRNVPAWN-NFGVKPQG 110 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 + V +E+ S N P+H+GH R ++G ++A++ +G +V + IND G I Sbjct: 111 E-EAVMVEYASPNTNKPLHLGHVRNVLLGYSVANITKAAGKKVYKTQIINDRGIHI 165 >gi|294878710|ref|XP_002768460.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983] gi|239870913|gb|EER01178.1| arginyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983] Length = 388 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 88/391 (22%), Positives = 150/391 (38%), Gaps = 95/391 (24%) Query: 43 GHLSTNAAMILSRPLGLD-------PLTIAELIVARIKIDP--DVDSVFIAGKGFINLYL 93 G N AM L++ D P I E I + + + + +S +A GF+ + L Sbjct: 41 GDYQCNNAMGLAKKFKSDLPDGMKIPKQIGEKIKSNLMEESPEEFESATVAPAGFVTVKL 100 Query: 94 SPSYLRKIL-SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 S ++ K L SS+V + I Y V ++ S N MHVGH R ++G+T++ Sbjct: 101 SSGWIAKQLTSSVVENTITYWEE-----PSVIVDMSSPNIAKEMHVGHLRSTILGETVSR 155 Query: 153 LMAFSG--------------YEVTREYYINDAGAQINTLA-------------------L 179 ++ +SG +V R ++ D G Q L L Sbjct: 156 ILEYSGNDVCNNIINRSSIDSQVQRINHVGDWGTQFGMLIEHMKDAYPDFLNHTPEVSDL 215 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 F++ + ++ + D + V G E A K W I D S + Sbjct: 216 QSFYKAAKKRFDEEPDFKKRSQEEVVALQSGDEYARK-----------AW-QICCDISRK 263 Query: 240 AMMKII-RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + ++ R ++ L Q + F +E I I++ L ++G V E Sbjct: 264 SFEEVYSRLGIEGLKEQGESFYNE---------MIGPIVEKLEKEGLVVES--------N 306 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL-AYFKCKYERGFDNMIYVMG 357 KC +F DDV ++KSDG Y Y + D+ A + + D ++Y+ Sbjct: 307 GAKC-------IFTDV---DDVPMMVVKSDGGYGYDSTDVTAVWYRLTQLHADEVVYITD 356 Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 + K+L VA K + ++L +L Sbjct: 357 LGQEVHFKKLFEVA------KMAVGIILLKL 381 >gi|971336|emb|CAA90040.1| arginyl tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] Length = 115 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 16/129 (12%) Query: 459 ARCRSIFRQAKD--IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 AR S+ RQ ++ + P D D + I E E+D L+ + +P + A + Sbjct: 1 ARICSMLRQGEEQGLKPAADLDF---SHIQSEKEYD-----LLKTIGGFPEAVAEAAEKR 52 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 P+++ Y+YDLAS H ++ + + N + + RL L+ A +N+ L + Sbjct: 53 IPHRVTNYIYDLASALHSFYNAE------KVIDPENEEKSRARLALMKATQITLNNALQL 106 Query: 577 IGVESPNEM 585 IGV +P +M Sbjct: 107 IGVSAPEKM 115 >gi|145641732|ref|ZP_01797308.1| arginyl-tRNA synthetase [Haemophilus influenzae R3021] gi|145273546|gb|EDK13416.1| arginyl-tRNA synthetase [Haemophilus influenzae 22.4-21] Length = 158 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 76/173 (43%), Gaps = 15/173 (8%) Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 +++ VG +V++ L + + FD+ + + N Y+QYAY R RSIF + Sbjct: 1 MIEAVGIGAVKYADLSKNRTTDYVFDWDNML-SFEGNTAPYMQYAYTRIRSIFNKT---- 55 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 D + P + D E L + L ++ ++ P+ L YLY+LA +F Sbjct: 56 ---DINSTALLAAPLTIK-DDKERTLAIKLLQFEEAVQTVGKEGTPHVLCAYLYELAGIF 111 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + H + A + + + RL+L + GL ++G+++ +M Sbjct: 112 SSFYEH------CPILNAEDESIKLSRLKLALLTEKTLKQGLTLLGIKTVEKM 158 >gi|295114635|emb|CBL35482.1| Arginyl-tRNA synthetase [butyrate-producing bacterium SM4/1] Length = 215 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 46/218 (21%), Positives = 97/218 (44%), Gaps = 39/218 (17%) Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML--------WRKNSELLDFDFCK--- 441 +DG P K R G + L H++DE+ + R + R+ +E++ K Sbjct: 12 KDGGPFK--TRDGGVMRLEHLIDEIDEEVYRKIQEKQRVPEEEMRRTAEMIGLAALKYGD 69 Query: 442 VKEQSKENPVF--------------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487 + Q+ ++ VF ++QY R +SI + ++ + L P + P Sbjct: 70 LSNQATKDYVFDVDRFISFEGNTGPHIQYMVVRIKSILEKYGELMGGT-YSLSP--IRPA 126 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 SE +E +L + L + V+E+A P+++ Y+YDL+ F+ + + Sbjct: 127 ASE---TEKKLQLELCRFGEVVESAFAETAPHRICQYMYDLSDAFNNFYLVN------KI 177 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +R+ + L+ ++N+ ++++G+E+P M Sbjct: 178 IGEEDREKQAGFISLISLTKDVLNACMDLLGMEAPEHM 215 >gi|67587705|ref|XP_665270.1| RIKEN cDNA 2610011N19 gene [Cryptosporidium hominis TU502] gi|54655858|gb|EAL35040.1| RIKEN cDNA 2610011N19 gene [Cryptosporidium hominis] Length = 505 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 34/59 (57%) Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 K KV ++F S N MHVGH R ++GDT + ++ + G+EV R ++ D G Q L Sbjct: 19 KTPKVIVDFSSPNIAKEMHVGHLRSTIIGDTTSRILEYLGFEVLRVNHVGDWGTQFGML 77 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 18/141 (12%) Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE-SEF-----DTSELQLIV 500 K N Y+ YAYAR +IFR+ + I D + VI Q+ S F + E +L + Sbjct: 373 KGNTAVYLLYAYARICAIFRKVEFIQSDDNM------VIKQKVSNFKLKISNNVERKLSI 426 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 L +P V + P +LA Y Y+L+ F ++ R + ++L RL Sbjct: 427 QLLRFPEVFDGILNDFFPNRLADYCYELSESFAQFYTE------CRIIGLEEQQLEQSRL 480 Query: 561 QLVHAVASIINSGLNIIGVES 581 L I+ GL+++GVE+ Sbjct: 481 LLCFLTKQILLKGLDLLGVET 501 >gi|326484474|gb|EGE08484.1| arginyl-tRNA synthetase [Trichophyton equinum CBS 127.97] Length = 632 Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 46/139 (33%), Positives = 64/139 (46%), Gaps = 16/139 (11%) Query: 58 GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNL 116 G++P +AE I ++ +P + S A FI L SP L K IL I YG N Sbjct: 83 GVNPKQLAEDIASKFPSNPLL-SQPTANGIFIPLSFSPDTLPKLILPFIFDRRASYGSNQ 141 Query: 117 I-----------GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREY 165 + GK KV IEF S N H GH R ++G +++L G++V + Sbjct: 142 LQGLRDPHDQSSGK-KKVIIEFSSPNIAKEFHAGHLRSTIIGAYISNLYESMGWDVIKVN 200 Query: 166 YINDAGAQINTLALSVFWR 184 Y+ D G Q LA V W+ Sbjct: 201 YLGDWGKQFGLLA--VGWQ 217 >gi|213962519|ref|ZP_03390781.1| arginyl-tRNA synthetase [Capnocytophaga sputigena Capno] gi|213954845|gb|EEB66165.1| arginyl-tRNA synthetase [Capnocytophaga sputigena Capno] Length = 597 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 34/123 (27%), Positives = 63/123 (51%), Gaps = 2/123 (1%) Query: 53 LSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE 111 L R + +P+ I E I +K ++ + F KGF+NL ++ +Y L+ I + Sbjct: 47 LLRHIKGNPVQIGEQIGTYLKEKAGNLVTDFNVIKGFLNLVIADTYYLNFLTEIK-DNPQ 105 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 +G + +E+ S N P+H+GH R ++G ++A ++ +G++V + IND G Sbjct: 106 FGLATPNSKEAILVEYSSPNTNKPLHLGHIRNNLLGYSVAEILKAAGHKVYKTQIINDRG 165 Query: 172 AQI 174 I Sbjct: 166 IHI 168 Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust. Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 20/137 (14%) Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 ++QY YAR +SI R+ + + + Q E L+ + +P ++++A Sbjct: 477 FIQYTYARIQSILRKYAETNNSKEI------TVIQPDALQEKEKNLLKSITLFPSIVQDA 530 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSH----GRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 P +A Y+YDL F+ + + G E+ AN R R+ L + Sbjct: 531 ADNYSPAVVANYVYDLVKDFNSFYQNVSILGEED-------ANKRHF---RVALSKKIGE 580 Query: 569 IINSGLNIIGVESPNEM 585 II ++G++ P M Sbjct: 581 IIAESFKMLGIQVPERM 597 >gi|126654469|ref|ZP_01726200.1| arginyl-tRNA synthetase [Bacillus sp. B14905] gi|126589066|gb|EAZ83286.1| arginyl-tRNA synthetase [Bacillus sp. B14905] Length = 314 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 76/298 (25%), Positives = 123/298 (41%), Gaps = 69/298 (23%) Query: 324 LLKSDGSYTYFAADLA---YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 + K+DG+ Y DLA Y + +Y+ + + YV+G++ + + K+L V + A+ Sbjct: 50 ITKTDGATLYATRDLAAAFYRQQQYQP--NKIFYVVGNEQTLHFKQLFQVIEKMGYSWAK 107 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------------ 416 ++ + +DG KMS R G + L V+ E Sbjct: 108 -DLQHVPFGMMLKDGK--KMSTRKGKVVLLADVLAEAIATAKRNIEDKNPYLQQKERVAQ 164 Query: 417 -VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF-YVQYAYARCRSIFRQAKDIFPD 474 VG +V F L K L D +F + + E YVQY YAR SI AK P Sbjct: 165 QVGVGAVIFNDL--KYHRLNDIEFSIEQMMNFEGETGPYVQYTYARICSIL--AKGDVPS 220 Query: 475 --LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 F ++ P +I+ L ++P+V++ A +P +A Y LA + Sbjct: 221 HIKTFAPLGQHAWP-----------IILLLEQFPKVVDTAFNQADPSIIAKYALQLARLL 269 Query: 533 HGHWSHGRENPRLRFVQANNRKLT-----MMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++ AN + LT RL L H VA ++ L ++G+ESP M Sbjct: 270 NKYY-------------ANQKILTDDAQQASRLALCHCVAIVLKESLALLGIESPENM 314 >gi|326469809|gb|EGD93818.1| arginyl-tRNA synthetase [Trichophyton tonsurans CBS 112818] gi|326485237|gb|EGE09247.1| arginyl-tRNA synthetase [Trichophyton equinum CBS 127.97] Length = 646 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 54/131 (41%), Gaps = 10/131 (7%) Query: 58 GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL- 116 G P IA I A+ ++ + G Y ++ SI+ + YG N Sbjct: 82 GKKPQEIAADIAAKFPKSDLIEPPVVVGAHLQFFYSHRPMTENVIRSILANKDAYGSNPN 141 Query: 117 --------IGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167 KG K V +EF S N P H GH R ++G +A+L G+EV + Y+ Sbjct: 142 VGLRDQRDASKGKKKVVVEFSSPNIAKPFHAGHLRSTIIGGFIANLYTILGWEVLKINYL 201 Query: 168 NDAGAQINTLA 178 D G Q LA Sbjct: 202 GDWGKQYGLLA 212 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 65/297 (21%), Positives = 120/297 (40%), Gaps = 62/297 (20%) Query: 324 LLKSDGSYTYFAADLAYF-KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 +++ DG+ Y D+A + E FD MIYV+ + ++ +L V +K Sbjct: 377 VIRKDGTPLYLTRDIAAIVERDDEYQFDKMIYVVAAQQELHLAQLFKTTELVGKKDLANR 436 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN----------- 431 CE + GM MS R G L ++ +VG M +KN Sbjct: 437 ---CEHISF---GMVRGMSTRKGTVKFLNDILKDVGEKMHEVM---QKNQAKYEQIEDPV 487 Query: 432 --SELLDFDFCKVKEQSK----------ENPVF-------YVQYAYARCRSIFRQAKDIF 472 +++L V++ S EN Y+QYA+AR S+ R+A +I Sbjct: 488 ATADILGITSVMVQDMSGKRINGYEFNLENMTSFEGDTGPYLQYAHARVCSVTRKA-EIK 546 Query: 473 PD----LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 P+ D L ++ + L+ LA++P V+ NA+ EP + YL+ + Sbjct: 547 PEELGSADLSLLT----------ESHAVDLVRLLAQWPDVVFNASKTLEPCTILTYLFRM 596 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + V + ++ M R+ L + ++++G+ ++G+ M Sbjct: 597 THMLSSGYD-------VLKVVGSEPEVKMARMALYESARQVLHNGMRLLGLNPVKRM 646 >gi|110750821|ref|XP_624685.2| PREDICTED: probable arginyl-tRNA synthetase, mitochondrial-like [Apis mellifera] Length = 508 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 66/290 (22%), Positives = 119/290 (41%), Gaps = 44/290 (15%) Query: 96 SYLRKILSSIVVS-GIEYGRNLIG-------KGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 +Y KI+S++ V E N G + +EF S N P H+GH R ++G Sbjct: 23 AYRHKIMSNLYVKFNKEIESNCFGITPPLLIDNKNIIVEFSSLNIAKPFHIGHLRSTIIG 82 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 + +A+L +F +VT+ Y+ D G Q + L + + + + Y V Sbjct: 83 NCIANLNSFLHNQVTKINYLGDWGTQFGYIYLGMKLSKIDNIEIQKNPIKTLYNVYVDAN 142 Query: 208 HVG------KELADKYSSELL---NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 + KE A K +L N + W +K ++V + KI K L I D Sbjct: 143 KLAENNPDMKEEAKKIFQQLELKDNVIHKNW-ETIKQFTVLELEKI----YKRLGIIFDQ 197 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + E + + I +I+ + + K D +++++ + + Sbjct: 198 YDWESMYTIKN---INKVINTMEEMQLL--------------KLDNHNRKVIY----IDE 236 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRL 367 P+LKSDG+ Y + D+A ++E+ FD M Y++ + S + L Sbjct: 237 QKSVPILKSDGTTLYLSRDIAAAIDRFEKNKFDAMYYIVENGQSDHFTNL 286 >gi|146298015|ref|YP_001192606.1| arginyl-tRNA synthetase [Flavobacterium johnsoniae UW101] gi|189083534|sp|A5FND6|SYR_FLAJO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|146152433|gb|ABQ03287.1| arginyl-tRNA synthetase [Flavobacterium johnsoniae UW101] Length = 592 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 16/133 (12%) Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 ++QY YAR +SI R+A DFD + I + E + ++ + +P VI+NA Sbjct: 476 FIQYTYARIQSIIRKA-------DFDFSNKIEIEELHEKEKELVK---QIELFPEVIQNA 525 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572 P +A Y YDL ++ + + + + + R+QL VA +I S Sbjct: 526 AQNHSPALIANYTYDLVKEYNSFYQS------VHILGEADLTKKIFRVQLSQKVAEVIKS 579 Query: 573 GLNIIGVESPNEM 585 +++G+E P M Sbjct: 580 AFSLLGIEVPERM 592 Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 2/89 (2%) Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK-VNIEFVSANPTGPMHVGHCRCAV 145 GF+N+ +S SY + I ++G K V +E+ S N P+H+GH R + Sbjct: 80 GFLNIVISDSYYVDFFNGIK-DQKQFGFLSPNPEEKAVMVEYSSPNTNKPLHLGHVRNNL 138 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQI 174 +G ++A ++ SG +V + IND G I Sbjct: 139 LGYSVAEILKASGKKVYKTQIINDRGIHI 167 >gi|326776602|ref|ZP_08235867.1| DALR anticodon binding domain protein [Streptomyces cf. griseus XylebKG-1] gi|326656935|gb|EGE41781.1| DALR anticodon binding domain protein [Streptomyces cf. griseus XylebKG-1] Length = 360 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 2/113 (1%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 AD S + + ++ + + + R+ +ER R G + A+ L+RP GL L I Sbjct: 4 ADLSRTVLHAVRRAVDEDALRAPVPARVRVERSRPGGSGDYACAVALQLARPAGLPALEI 63 Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL--RKILSSIVVSGIEYGRN 115 A ++ R+ +P V V I G GF++ L + R +L ++ G+ YG Sbjct: 64 ARILRERVAAEPGVGRVEITGPGFLSFTLDAPAVGDRAVLGAVREQGLGYGHG 116 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 44/189 (23%), Positives = 83/189 (43%), Gaps = 14/189 (7%) Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456 P+ AG+ + + +G D+ R+ +L + ++ Q + NP+F V+Y Sbjct: 186 PVPAGATAGELL------ERLGPDAARWGLLRAAGHDRAALG-PELLVQGEANPLFRVRY 238 Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 A+AR R++ R A + D P P + +D + LI +A++P V+ A + Sbjct: 239 AHARARALTRGATAL--GFTADAAPYGESP--APYDEAARPLIDLIADHPGVLLAAARHR 294 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 P ++A L +V H + P L RL L A +++ GL++ Sbjct: 295 APDRVA---RQLEAVAHAFFDFHDSCPSLPAGDEKPSAAHRARLALAEAAGTVLAGGLSL 351 Query: 577 IGVESPNEM 585 +G+ +P + Sbjct: 352 LGIRAPEHL 360 >gi|302498732|ref|XP_003011363.1| hypothetical protein ARB_02422 [Arthroderma benhamiae CBS 112371] gi|291174913|gb|EFE30723.1| hypothetical protein ARB_02422 [Arthroderma benhamiae CBS 112371] Length = 655 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 71/292 (24%), Positives = 115/292 (39%), Gaps = 75/292 (25%) Query: 329 GSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA-----AAVSEKKAQIN 382 G+ TY D+A + E+ FD MIYV+ ++ Y +RL V+ K IN Sbjct: 369 GTTTYLLRDIAAALERVEKYQFDKMIYVVSTEQDLYFQRLFKTIELMGYTDVAAKLEHIN 428 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN----------S 432 G + MS R G L ++DE GS M RKN + Sbjct: 429 F-----------GKVMGMSSRLGTVKILSDILDECGSAMHDVM---RKNPAKYEQIENPA 474 Query: 433 ELLD---------------------FDFCKVKE-QSKENPVFYVQYAYARCRSIFRQ--- 467 E+ D FD K+ + P Y+QYA+AR SI R+ Sbjct: 475 EVADTLGITAVMVQDMAGKRIHNYPFDIAKMTSFEGDTGP--YLQYAHARLCSIVRKVDI 532 Query: 468 -AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 +K+I +F L + + ++ +A+YP V NA EP + YL+ Sbjct: 533 DSKEI-TTANFSLLK----------EPHAINILRLMAQYPDVTCNALKTLEPTTILTYLF 581 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 LA + ++ + A + ++T+ RL L ++ +G+ ++G Sbjct: 582 RLAHQVSSGYD------VIKVIGAESHEVTVARLALYEGARQVLENGMRLLG 627 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 51/173 (29%), Positives = 76/173 (43%), Gaps = 35/173 (20%) Query: 38 RDCAHGHL-----STNAAMILS----RPLGLDPLTIAELIVARIKI-----DPDVDSVFI 83 +D A+G + +TNA ++L + G++P +AE IV++ P + +FI Sbjct: 54 KDTAYGAVQWANAATNADLMLITARLKLKGINPKQLAEDIVSKFPSTSLLRQPTANGIFI 113 Query: 84 AGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLI-----------GKGTKVNIEFVSAN 131 L P L K IL I YG N + GK KV IEF S N Sbjct: 114 P------LSFCPDTLPKLILPFIFDRRASYGSNSLQGLRNPHDQSAGK-KKVIIEFSSPN 166 Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 H GH R ++G +++L G++V + Y+ D G Q LA V W+ Sbjct: 167 IAKEFHAGHLRSTIIGAYISNLYESMGWDVVKVNYLGDWGKQFGLLA--VGWQ 217 >gi|115965891|ref|XP_001186294.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 428 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 5/116 (4%) Query: 68 IVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYG-RNLIGKGTKVNI 125 I +I V ++ + KG + L P ++ +++L + YG + G +K+NI Sbjct: 83 IAKKITCPEHVQNISVE-KGVLYFSLDPQFIVKQVLQDVSEQQGCYGYQQYPGIESKLNI 141 Query: 126 --EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 E+ S N P H GH R ++G+ LA+L G+ VTR Y+ D G Q L + Sbjct: 142 IVEYSSPNIAKPFHAGHLRSTLIGNFLANLQESLGHNVTRINYLGDWGTQFGILGV 197 >gi|115644319|ref|XP_792125.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 408 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 5/117 (4%) Query: 68 IVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYG-RNLIGKGTKVNI 125 I +I V ++ + KG + L P ++ +++L + YG + G +K+NI Sbjct: 63 IAKKITCPEHVQNISVE-KGVLYFSLDPQFIVKQVLQDVSEQQGCYGYQQYPGIESKLNI 121 Query: 126 --EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 E+ S N P H GH R ++G+ LA+L G+ VTR Y+ D G Q L + Sbjct: 122 IVEYSSPNIAKPFHAGHLRSTLIGNFLANLQESLGHNVTRINYLGDWGTQFGILGVG 178 >gi|295674131|ref|XP_002797611.1| arginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01] gi|226280261|gb|EEH35827.1| arginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01] Length = 584 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 21/154 (13%) Query: 77 DVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNL-IG--------KGTK-VNI 125 D+ + IA I + P L K ++ +I + YG N +G KG K + + Sbjct: 100 DLINTPIAVGTHIQFFFKPEPLTKTVIKAIQENRATYGSNANVGLRDPTDPSKGKKKIIV 159 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EF S N P H GH R ++G LA+L G++V + Y+ D G Q LA Y Sbjct: 160 EFSSPNIAKPFHAGHLRSTIIGGFLANLYTIMGWDVVKMNYLGDWGKQYGLLANG----Y 215 Query: 186 QQALYNNDSDL---PEGYYPGVYLKHVGKELADK 216 ++ Y N+ +L P + VY+K + K++A++ Sbjct: 216 EK--YGNEEELVKDPINHLFDVYVK-INKDVAEQ 246 >gi|225011678|ref|ZP_03702116.1| arginyl-tRNA synthetase [Flavobacteria bacterium MS024-2A] gi|225004181|gb|EEG42153.1| arginyl-tRNA synthetase [Flavobacteria bacterium MS024-2A] Length = 595 Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 4/124 (3%) Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSP-SYLRKILSSIVVSGIE 111 L R + P +AE I + + + F KGF+NL LS Y+ + +S E Sbjct: 48 LLRQVKARPEIVAEEIGNYLVSNLSIVEGFNVVKGFLNLVLSDLFYINQFSEFYKIS--E 105 Query: 112 YGRNLIGKGT-KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170 YG + + V +EF S N P+H+GH R V+G ++A ++ +G V + IND Sbjct: 106 YGHTSVTDSSPTVMVEFSSPNTNKPLHLGHIRNNVLGYSVAKILEANGKRVIKTQIINDR 165 Query: 171 GAQI 174 G I Sbjct: 166 GIHI 169 Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 17/134 (12%) Query: 453 YVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511 ++QY +AR +++ ++A F ++ +FD S D E ++I L YP V+ Sbjct: 478 FIQYTHARIKTLIQRAD--FQNIGNFDTL--------SILDQKEREVIKQLGNYPEVVTL 527 Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571 A P +A Y+YDL ++ + + VQ N R+ L VA +I Sbjct: 528 AGAQYSPALIANYIYDLVKSYNTFYQNVSVLGSDNLVQKN------FRIALSQKVAEVIY 581 Query: 572 SGLNIIGVESPNEM 585 +G ++G+ PN M Sbjct: 582 NGCGLLGINVPNRM 595 >gi|225684678|gb|EEH22962.1| arginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03] Length = 720 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 21/154 (13%) Query: 77 DVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNL-IG--------KGTK-VNI 125 D+ + IA I + P L K ++ +I + YG N +G KG K + + Sbjct: 175 DLINTPIAVGTHIQFFFKPEPLTKTVIKAIQENRATYGSNANVGLRDPTDPSKGKKKIIV 234 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EF S N P H GH R ++G LA+L G++V + Y+ D G Q LA Y Sbjct: 235 EFSSPNIAKPFHAGHLRSTIIGGFLANLYTIMGWDVIKMNYLGDWGKQYGLLANG----Y 290 Query: 186 QQALYNNDSDL---PEGYYPGVYLKHVGKELADK 216 ++ Y N+ +L P + VY+K + K++A++ Sbjct: 291 EK--YGNEEELVKDPINHLFDVYVK-INKDVAEQ 321 >gi|226286772|gb|EEH42285.1| arginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18] Length = 720 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 21/154 (13%) Query: 77 DVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNL-IG--------KGTK-VNI 125 D+ + IA I + P L K ++ +I + YG N +G KG K + + Sbjct: 175 DLINTPIAVGTHIQFFFKPEPLTKTVIKAIQENRATYGSNANVGLRDPTDPSKGKKKIIV 234 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EF S N P H GH R ++G LA+L G++V + Y+ D G Q LA Y Sbjct: 235 EFSSPNIAKPFHAGHLRSTIIGGFLANLYTIMGWDVIKMNYLGDWGKQYGLLANG----Y 290 Query: 186 QQALYNNDSDL---PEGYYPGVYLKHVGKELADK 216 ++ Y N+ +L P + VY+K + K++A++ Sbjct: 291 EK--YGNEEELVKDPINHLFDVYVK-INKDVAEQ 321 >gi|261195450|ref|XP_002624129.1| arginyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081] gi|239588001|gb|EEQ70644.1| arginyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081] gi|239610510|gb|EEQ87497.1| arginyl-tRNA synthetase [Ajellomyces dermatitidis ER-3] Length = 568 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 10/113 (8%) Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166 + +E G ++ K+ +EF S N P H GH R ++G LA+L G++V + Y Sbjct: 63 TNSLEKGDLVLAGKKKIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLHTVMGWDVVKMNY 122 Query: 167 INDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLKHVGKELADK 216 + D G Q LA Y++ Y N+ +L P + VY+K + K++A++ Sbjct: 123 LGDWGKQYGLLANG----YEK--YGNEEELVKDPINHLFDVYVK-INKDVAEQ 168 >gi|295698518|ref|YP_003603173.1| arginyl-tRNA synthetase [Candidatus Riesia pediculicola USDA] gi|291157341|gb|ADD79786.1| arginyl-tRNA synthetase [Candidatus Riesia pediculicola USDA] Length = 584 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 66/290 (22%), Positives = 126/290 (43%), Gaps = 47/290 (16%) Query: 326 KSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYV-------KRLEAVAAAVSEK 377 KSDG Y Y ++A K + ++ D ++Y + S ++ K+ V V + Sbjct: 312 KSDGGYLYTTTEIACLKYRCQKLKADRILYYVDSRQKRHLQQSWIIAKKAGYVEENVKLE 371 Query: 378 KAQINVLLCELVRLYR--DGMPIKMSK-------RAGDFITLR-----------HVVDEV 417 QI ++L + + +R G +K+ + +A FI+ + + ++ Sbjct: 372 HHQIGMILGKDKKPFRTRSGKNVKLFEILEKSIIKAKQFISEKGLKNSRKRNILKIARKI 431 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G SV++ L + F++ + N Y+QY Y+R S+ +++K Sbjct: 432 GIGSVKYSDLSKNRKTDYIFNWSTI-FSFIGNTASYIQYTYSRANSLIKKSK-------- 482 Query: 478 DLFPRNVIPQESEFDTSELQLIV--HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 N I E+ T+ + I+ HL + +++ + P L YLY L++ F Sbjct: 483 --MNLNEIKDETFIATNSYEKIISMHLLRFVEILQETSQKGLPNILCNYLYRLSNEFSKF 540 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + EN + VQ RK RL+LV+ I GLN++G+++ ++M Sbjct: 541 Y----ENCSIINVQDKTRKKN--RLKLVYLTKITIKIGLNLLGIQTISKM 584 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 8/104 (7%) Query: 74 IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPT 133 I+P+ +VF+ K +IN + K LS+I E +N++ I++ S N Sbjct: 79 IEPNFINVFLEEK-WINQQIDCMLSEKYLSTIRSENTE--KNMV-----TIIDYSSPNIA 130 Query: 134 GPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 MHVGH R ++GD++ + F G ++ + +I D G L Sbjct: 131 KNMHVGHLRSTIIGDSIVRISKFLGKKIIKVNHIGDWGTHFGML 174 >gi|226324687|ref|ZP_03800205.1| hypothetical protein COPCOM_02473 [Coprococcus comes ATCC 27758] gi|225207135|gb|EEG89489.1| hypothetical protein COPCOM_02473 [Coprococcus comes ATCC 27758] Length = 422 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 79/380 (20%), Positives = 151/380 (39%), Gaps = 71/380 (18%) Query: 241 MMKIIRDDLKA----LNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 +M + DLK LN++ D++ E D + P D+++ L ++GY + Sbjct: 79 IMNVSVTDLKKNYANLNVEFDLWKGESDAQKYIP----DMVERLKKEGYAH--------- 125 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYERGF--DN 351 +D L+ D + P +LKSDG+ Y DLA + E F + Sbjct: 126 -------IDNGALVVDVKEETDTKEIPPCIILKSDGAALYDTTDLATL-VEREELFQPNE 177 Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY-RDGMPIKMSKRAGDFITL 410 +IYV+ + ++ A K + + +DG P K R G + L Sbjct: 178 VIYVVDKRQELHFVQVFRCAKKTGIVKEDTKLTFLGFGTMNGKDGKPFKT--REGGVMRL 235 Query: 411 RHVVDEVGSDSVRFMMLWRKNSE-----------LLDFDFCKVKEQSKENPVF------- 452 +++ E+ + R SE + + + Q+ ++ VF Sbjct: 236 ENLIREITEKMYEKITENRTVSEEEAKATAKMVGMAAIKYGDLSNQAAKDYVFDVDRFTS 295 Query: 453 -------YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 Y+ Y R +SI + K+ +D D+ ++ SE SE L++ A++ Sbjct: 296 FEGNTGPYILYTIVRIKSILNKYKESGKSMD-DI---KILSATSE---SEKALMLEAAKF 348 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 V+EN P+K+ Y+YDLA+ F+ + + + + + + L+ Sbjct: 349 GSVMENVYEELAPHKICAYIYDLANAFNRFYHE------TKILAEEDEQKQKSYIALLTL 402 Query: 566 VASIINSGLNIIGVESPNEM 585 I+ + ++++G E+P M Sbjct: 403 TRDILTTCIDLLGFEAPERM 422 >gi|302508940|ref|XP_003016430.1| hypothetical protein ARB_04719 [Arthroderma benhamiae CBS 112371] gi|291180000|gb|EFE35785.1| hypothetical protein ARB_04719 [Arthroderma benhamiae CBS 112371] Length = 748 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 10/131 (7%) Query: 58 GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL- 116 G P IA I A+ ++ + G Y ++ SI+ + YG N Sbjct: 142 GKKPQEIAADIAAKFPKSDLIEPPVVVGAHLQFFYSHRPMTENVIRSILANKDAYGSNPN 201 Query: 117 --------IGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167 KG K + +EF S N P H GH R ++G +A+L G+EV + Y+ Sbjct: 202 VGLRDQRDASKGKKKLVVEFSSPNIAKPFHAGHLRSTIIGGFIANLYTILGWEVLKINYL 261 Query: 168 NDAGAQINTLA 178 D G Q LA Sbjct: 262 GDWGKQYGLLA 272 Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust. Identities = 30/131 (22%), Positives = 63/131 (48%), Gaps = 22/131 (16%) Query: 453 YVQYAYARCRSIFRQAKDIFPD----LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 Y+QYA+AR S+ R+A +I P+ D L ++ + L+ LA++P V Sbjct: 631 YLQYAHARVCSVTRKA-EINPEELGSADLSLLT----------ESHAVDLVRLLAQWPDV 679 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 + NA+ EP + YL+ + + + + V + ++ M R+ L + Sbjct: 680 VFNASKTLEPCTILTYLFRMTHMLSSGYD-------VLKVVGSEPEVKMARMALYESARQ 732 Query: 569 IINSGLNIIGV 579 ++++G+ ++G+ Sbjct: 733 VLHNGMRLLGL 743 >gi|198430377|ref|XP_002126846.1| PREDICTED: similar to arginyl-tRNA synthetase 2, mitochondrial [Ciona intestinalis] Length = 526 Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 111/460 (24%), Positives = 188/460 (40%), Gaps = 95/460 (20%) Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 K+ I+F S N HVGH R V+G+ +++++ +G+EV R Y+ D G Q +AL Sbjct: 65 KIVIDFSSPNIAKTFHVGHYRSTVIGNFISNILKAAGHEVCRINYLGDWGLQFALIALG- 123 Query: 182 FWRYQ-QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP---EEKWLPIVK--- 234 F +Y L D P + VY+ K SSE N P EE +K Sbjct: 124 FQKYGCHTLLRKD---PLTHLFDVYV---------KISSESKNNPDVLEEANTIFLKMEN 171 Query: 235 -DYSVQAMMKIIRD-DLKALNIQHD-IFISEDDFHRGDPSPIRD----IIDNLARQGYVY 287 D V +IR LK +D I IS D++ S RD II NL + + Sbjct: 172 NDKKVMEFWDLIRKVSLKEYRKLYDKINISFDEY--NGESEYRDKAKWIISNLQQASLL- 228 Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR--PLLKSDGSYTYFAADLAYFKCKY 345 + K MD L S + + + L +++G+ Y + D+A ++ Sbjct: 229 --------TNVNGKICMD----LSNSDWLDNTPNHTATLARANGTTVYLSRDVAAAIHRH 276 Query: 346 E-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD-GMPIKMSKR 403 + FD IY+ + + ++L A+ + K A+ + E +++ G KM R Sbjct: 277 DVHKFDRSIYITDENQRFHFQQLFAILDKMGYKWARRS----EGRLVHKTFGRISKMQTR 332 Query: 404 AGDFITLRHVVDEV--------------------GSDSVRFMMLWRKNSELLDFDF-CKV 442 G+ + ++DE ++ V+ + L S LL DF K+ Sbjct: 333 KGEVVFFTDILDEAMEKLKTDRQQHGTRKRDIKNENEVVKLLAL----SGLLCHDFKAKL 388 Query: 443 KE----------QSKENPVFYVQYAYARCRSIFRQAK-DIFPDLDFDLFPRNVIPQESEF 491 + SK ++QY + R S+ + +D NV+ Q + Sbjct: 389 HKGYAFSWTAVLSSKGFTGLFLQYTHCRLCSLEENCGVPLVSCIDI-----NVLEQYQDM 443 Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 + +I HL+ Y V++ A ++ EP + YL+ L+ + Sbjct: 444 ----VNIIQHLSCYSEVVKAAYVSLEPSYVLKYLFHLSHL 479 >gi|327303838|ref|XP_003236611.1| arginyl-tRNA synthetase [Trichophyton rubrum CBS 118892] gi|326461953|gb|EGD87406.1| arginyl-tRNA synthetase [Trichophyton rubrum CBS 118892] Length = 646 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 10/131 (7%) Query: 58 GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL- 116 G P IA I A+ ++ + G Y ++ SI+ + YG N Sbjct: 82 GKKPQEIAADIAAKFPKSDLIEPPVVVGAHLQFFYSHRPMTENVIRSILANKDAYGSNPN 141 Query: 117 --------IGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167 KG K + +EF S N P H GH R ++G +A+L G+EV + Y+ Sbjct: 142 VGLRDQRDASKGKKKLVVEFSSPNIAKPFHAGHLRSTIIGGFIANLYTILGWEVLKINYL 201 Query: 168 NDAGAQINTLA 178 D G Q LA Sbjct: 202 GDWGKQYGLLA 212 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 65/297 (21%), Positives = 120/297 (40%), Gaps = 62/297 (20%) Query: 324 LLKSDGSYTYFAADLAYF-KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 +++ DG+ Y D+A + E FD MIYV+ + ++ +L V +K Sbjct: 377 VIRKDGTPLYLTRDIAAIVERDDEYQFDKMIYVVAAQQELHLAQLFKTTELVGKKDLANR 436 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN----------- 431 CE + GM MS R G L ++ +VG M +KN Sbjct: 437 ---CEHISF---GMVRGMSTRKGTVKFLNDILKDVGEKMHEVM---QKNQAKYEQIEDPV 487 Query: 432 --SELLDFDFCKVKEQSK----------ENPVF-------YVQYAYARCRSIFRQAKDIF 472 +++L V++ S EN Y+QYA+AR S+ R+A +I Sbjct: 488 ATADVLGITSVMVQDMSGKRINGYEFNLENMTSFEGDTGPYLQYAHARVCSVTRKA-EIN 546 Query: 473 PD----LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 P+ D L ++ + L+ LA++P V+ NA+ EP + YL+ + Sbjct: 547 PEELGSADLSLLT----------ESHAVDLVRLLAQWPDVVFNASKTLEPCTILTYLFRM 596 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + V + ++ M R+ L + ++++G+ ++G+ M Sbjct: 597 THMLSSGYD-------VLKVVGSEPEVKMARMALYESARQVLHNGMRLLGLNPVKRM 646 >gi|302338315|ref|YP_003803521.1| arginyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293] gi|301635500|gb|ADK80927.1| arginyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293] Length = 593 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 6/92 (6%) Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 + P L+++ S YG+ + G K+ IEF N P+H+GH R +G++++ Sbjct: 106 MMPGLLKQVFSEAEA----YGKTDLYAGEKIMIEFSCPNTNKPLHLGHLRNDALGESVSR 161 Query: 153 LMAFSGYEVTREYYINDAGAQI--NTLALSVF 182 ++ +G +V + IND G I + LA SVF Sbjct: 162 ILKANGADVRKVNLINDRGIHICKSMLAYSVF 193 Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust. Identities = 59/283 (20%), Positives = 110/283 (38%), Gaps = 41/283 (14%) Query: 324 LLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-- 380 LL+SDG+ Y D+ ++ + F +IYV+ S+ + K L V + A+ Sbjct: 319 LLRSDGTTLYLTQDIGTAIARHGDWPFKRLIYVVASEQQYHFKVLFHVLKKLGFDWAENL 378 Query: 381 -------INV-----------------LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 +N+ L+ EL + IK R GD + + Sbjct: 379 YHLSYGMVNLPEGKMKSREGTVVDADDLIAELSSMA--AAEIKTKGREGDVGDVEKTAEA 436 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG ++ + +L ++ + FD K N Y+QY AR S+ R+ ++ Sbjct: 437 VGLAALNYYLLQISPAKDMIFD-PKESISFNGNTGPYLQYMGARISSMLRKFEE-----R 490 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 D F + E +LI ++ +P + A P + YLYDL+ F ++ Sbjct: 491 SDEFKGATVDPSLITTIEERELIKLISLFPEKVAQAGAEFNPSIVTTYLYDLSRTFSRYY 550 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 + + +++ L RL L V ++ + ++G+ Sbjct: 551 HDN------QILNNDDKNLAFTRLSLAKGVLQVLKNAYWLVGI 587 >gi|330883273|gb|EGH17422.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race 4] Length = 224 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 66/158 (41%), Gaps = 25/158 (15%) Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 LR + VG +V++ L + + F+F ++ + N Y+ YAY R +FR+ Sbjct: 80 LRSIAKAVGISAVKYADLSKHRASDYSFNFDQMLS-FEGNTAPYLLYAYTRVAGVFRKL- 137 Query: 470 DIFPDLDFDLFPRNVI---PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 FD ++ PQE E L LA++ + N P+ L YLY Sbjct: 138 ----GTPFDASKGQIVLAAPQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLY 186 Query: 527 DLASVFHGHWSH----GRENP-----RLRFVQANNRKL 555 DLA +F + + G ENP RLR R L Sbjct: 187 DLAGLFSSFYENCPILGAENPDQQQSRLRLAALTGRTL 224 >gi|302661515|ref|XP_003022425.1| hypothetical protein TRV_03489 [Trichophyton verrucosum HKI 0517] gi|291186368|gb|EFE41807.1| hypothetical protein TRV_03489 [Trichophyton verrucosum HKI 0517] Length = 705 Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 10/131 (7%) Query: 58 GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL- 116 G P IA I A+ ++ + G Y ++ SI+ + YG N Sbjct: 142 GKKPQEIAADIAAKFPKSDLIEPPVVVGAHLQFFYSHRPMTENVIRSILANKDAYGSNPN 201 Query: 117 --------IGKGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167 KG K + +EF S N P H GH R ++G +A+L G+EV + Y+ Sbjct: 202 VGLRDQRDASKGKKKLVVEFSSPNIAKPFHAGHLRSTIIGGFIANLYTILGWEVLKINYL 261 Query: 168 NDAGAQINTLA 178 D G Q LA Sbjct: 262 GDWGKQYGLLA 272 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 64/291 (21%), Positives = 119/291 (40%), Gaps = 62/291 (21%) Query: 324 LLKSDGSYTYFAADLAYF-KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 +++ DG+ Y D+A + E FD MIYV+ + ++ +L V +K Sbjct: 437 VIRKDGTPLYLTRDIAAIVERDDEYQFDKMIYVVAAQQELHLAQLFKTTELVGKKDLANR 496 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN----------- 431 CE + GM MS R G L ++ +VG M +KN Sbjct: 497 ---CEHISF---GMVRGMSTRKGTVKFLNDILKDVGEKMHEVM---QKNQAKYEQIEDPV 547 Query: 432 --SELLDFDFCKVKEQSK----------ENPVF-------YVQYAYARCRSIFRQAKDIF 472 +++L V++ S EN Y+QYA+AR S+ R+A +I Sbjct: 548 ATADVLGITSVMVQDMSGKRINGYEFNLENMTSFEGDTGPYLQYAHARVCSVTRKA-EIN 606 Query: 473 PD----LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 P+ D L ++ + L+ LA++P V+ NA+ EP + YL+ + Sbjct: 607 PEELGSADLSLLT----------ESHAVDLVRLLAQWPDVVFNASKTLEPCTILTYLFRM 656 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 + + + V + ++ M R+ L + ++++G+ ++G+ Sbjct: 657 THMLSSGYD-------VLKVVGSEPEVKMARMALYESARQVLHNGMRLLGL 700 >gi|323436087|ref|ZP_01050304.2| arginine-tRNA ligase [Dokdonia donghaensis MED134] gi|321496402|gb|EAQ38703.2| arginine-tRNA ligase [Dokdonia donghaensis MED134] Length = 670 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 14/133 (10%) Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 ++QY Y R ++I R+AK++ + R++ P+E E LI + +YP I+ A Sbjct: 552 FIQYTYVRIQAILRKAKELNVPASVE-GARDLHPKEKE-------LIKLVQDYPATIQLA 603 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572 + P +A Y YDL ++ + +++ + +N R+ L V +I S Sbjct: 604 AAQKSPAIIANYTYDLVKEYNSFFQ------QVQILGTDNVADQSFRVALSKEVGQVIES 657 Query: 573 GLNIIGVESPNEM 585 ++G++ P M Sbjct: 658 AFGLLGIDVPERM 670 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 24/215 (11%) Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 I E +VA++ + + F KGF+NL ++ ++ + I + +G+ G V Sbjct: 88 IGEYLVAQV----EEITAFNVVKGFLNLVVADAFYMNAFAEIQATE-NFGKTPEA-GKAV 141 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +E+ S N P+H+GH R ++G +++ ++ +G +V + IND G I L+ W Sbjct: 142 MVEYSSPNTNKPLHLGHVRNVLLGYSVSEIIKAAGSKVYKTQIINDRGIHICKSMLA--W 199 Query: 184 -RYQQALYNNDSDLP-----EGYY---PGVYLKHVGKEL-ADKYSSELLNFPEEKWLPIV 233 RY + L YY V+ K K L +D+ S+ E + I+ Sbjct: 200 ERYGNGETPESTGLKGDKLVGNYYVKFESVFQKEYTKWLTSDEGLSKFQELKETQLDKIL 259 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 K+ ++ I D+K LN I +SE+D +G Sbjct: 260 KE-----VVSIESKDVK-LNKHLAIEVSEEDLRKG 288 >gi|328885051|emb|CCA58290.1| arginyl tRNA synthetase [Streptomyces venezuelae ATCC 10712] Length = 320 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 10/132 (7%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 R+ +ER R G +++ A+ L+RP G L +A ++ R++ P + V + G GF+N Sbjct: 30 RVKVERARPGGTGEYASSIALTLARPSGRTALDVAGILQERLRDVPGLREVAVTGPGFLN 89 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 L +++ +I +G YG GT V + V+ R +VG T+ Sbjct: 90 FVLGRDSGAELVHAIREAGTSYGSGTALAGTVVRLAEVT----------ESRALLVGRTV 139 Query: 151 ASLMAFSGYEVT 162 L+ G + Sbjct: 140 LRLLRSQGADAA 151 >gi|332880010|ref|ZP_08447694.1| arginine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332682006|gb|EGJ54919.1| arginine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 595 Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 2/123 (1%) Query: 53 LSRPLGLDPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIE 111 L R + +P+ I E I +K ++ S F KGF+NL ++ SY L I Sbjct: 47 LLRHIKGNPVQIGEQIGDYLKKHAGNLVSDFNVIKGFLNLVIADSYYIDFLDQIR-ENKH 105 Query: 112 YGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAG 171 +G + +E+ S N P+H+GH R ++G ++A ++ +G++V + IND G Sbjct: 106 FGLAAPNSKEAILVEYSSPNTNKPLHLGHIRNNLLGYSVAEILKAAGHKVYKTQIINDRG 165 Query: 172 AQI 174 I Sbjct: 166 IHI 168 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 24/138 (17%) Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 +VQY YAR +SI R+ ++ + +P E L+ + +P +++ A Sbjct: 477 FVQYTYARIQSILRKYAEM------GVADSTAMP--DTLHEKEKALLKSITLFPAIVQEA 528 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSH----GRENP-RLRFVQANNRKLTMMRLQLVHAVA 567 P +A Y+YDL F+ + + G + P +L F R+ L + Sbjct: 529 AEEYSPAVIANYVYDLVKDFNSFYQNVSILGEKEPVKLHF-----------RVVLCEKIG 577 Query: 568 SIINSGLNIIGVESPNEM 585 II + ++G++ P M Sbjct: 578 EIIAASFKMLGIQVPERM 595 >gi|323463592|gb|ADX75745.1| arginyl-tRNA synthetase 2 [Staphylococcus pseudintermedius ED99] Length = 554 Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 56/108 (51%), Gaps = 4/108 (3%) Query: 87 GFINLYLS-PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 GF+N +L S +KI+ + ++ N + K+ I++ S N P +GH R V Sbjct: 77 GFLNFFLDRQSSSQKIIECFNENTLK--NNKLLSAEKIVIDYSSPNIAKPFSMGHLRATV 134 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV-FWRYQQALYNN 192 +GD++A ++ +G +V R ++ D G Q L ++ W Q+ + NN Sbjct: 135 IGDSIAKILEANGAKVIRINHLGDWGTQFGKLIVAYKKWGEQKRVENN 182 >gi|330807100|ref|YP_004351562.1| arginine--tRNA ligase (arginyl-tRNA synthetase), C-term [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375208|gb|AEA66558.1| Putative arginine--tRNA ligase (Arginyl-tRNA synthetase), C-term [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 332 Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 10/129 (7%) Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 LR + VG D+V++ L + + F+F + + N Y+ YAY R +FR+ Sbjct: 173 LRKIAKVVGIDAVKYADLSKHRTSDYSFNF-DLMLNFEGNTAPYLLYAYTRVAGVFRKLG 231 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 F ++D + P E E L LA++ V+ N P+ L YLYD+A Sbjct: 232 KSFNEVDGQIVLE--APHEQE-------LAAKLAQFGEVLNNVADKGTPHTLCAYLYDVA 282 Query: 530 SVFHGHWSH 538 +F + + Sbjct: 283 GLFSSFYEN 291 >gi|312374379|gb|EFR21944.1| hypothetical protein AND_15986 [Anopheles darlingi] Length = 612 Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Query: 119 KGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 KG++ + +EF S N P H GH R ++G+ +A++ F G V R Y+ D G Q L Sbjct: 40 KGSQTIVVEFSSPNIAKPFHAGHLRSTIIGNFIANVNEFLGQRVVRLNYLGDWGTQFGYL 99 Query: 178 ALSV 181 AL V Sbjct: 100 ALGV 103 >gi|195359293|ref|XP_002045339.1| GM21064 [Drosophila sechellia] gi|194129328|gb|EDW51371.1| GM21064 [Drosophila sechellia] Length = 499 Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 73/304 (24%), Positives = 122/304 (40%), Gaps = 48/304 (15%) Query: 312 RSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAV 370 R +V D P++KSDGS Y A D+A + R F ++YV+ + + + L Sbjct: 214 REIVVVDGRRIPVIKSDGSTLYLARDIAALLERLSRFQFSRLLYVVDNGQADHFNALFKT 273 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS---DSVRFMML 427 AA+ ++ L E ++ + G MS R G I L+ V+DE S + Sbjct: 274 TAALDDR------LSLEQLQHVKFGRIQGMSTRQGKAIFLKDVLDEARSIMREKRNLSAT 327 Query: 428 WRKNSELLDFDFCKV-----------KEQSKENPVFYVQYA------------YARCRSI 464 R+N L D C + K++ + + F Q A Y CR Sbjct: 328 TRENYNLDDEHVCDILGVSAVLINVLKQRRQRDHEFSWQQALQVNGDTGIKLQYTHCR-- 385 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTS---ELQLIVHLAEYPRVIENATIAQEPYKL 521 D F D+D D ++ P F T L L+ LA + + + + E L Sbjct: 386 LHSLLDNFRDVDLD----DIKPDWKHFATEPADALDLLYALARFDQSVWQSKEQLEACVL 441 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 YL+ L + + R RL Q ++ + + RL L +A + G+ ++G+ Sbjct: 442 VNYLFGLCN------ATSRALKRLPVKQESSLERQLQRLLLFNAAKKTLRQGMELLGLRP 495 Query: 582 PNEM 585 ++M Sbjct: 496 LDQM 499 >gi|302658722|ref|XP_003021062.1| hypothetical protein TRV_04838 [Trichophyton verrucosum HKI 0517] gi|291184938|gb|EFE40444.1| hypothetical protein TRV_04838 [Trichophyton verrucosum HKI 0517] Length = 636 Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 52/173 (30%), Positives = 78/173 (45%), Gaps = 25/173 (14%) Query: 33 VIERPRDCAH-----GHLSTNAAMILS----RPLGLDPLTIAELIVARIKIDPDVDSVFI 83 ++E +D A+ + +TNA ++L + G++P +AE IV++ + S Sbjct: 49 LVECDKDTAYDAVQWANAATNADLMLITARLKLKGINPKQLAEDIVSKFP-STSLLSQPT 107 Query: 84 AGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLI-----------GKGTKVNIEFVSAN 131 A FI L P L K IL I YG N + GK KV IEF S N Sbjct: 108 ANGIFIPLSFCPDTLPKLILPFIFDRRASYGSNPLQGLRDPHDQSSGK-KKVIIEFSSPN 166 Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 H GH R ++G +++L G++V + Y+ D G Q LA V W+ Sbjct: 167 IAKEFHAGHLRSTIIGAYISNLYESMGWDVVKVNYLGDWGKQFGLLA--VGWQ 217 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 67/285 (23%), Positives = 108/285 (37%), Gaps = 71/285 (24%) Query: 329 GSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVA-----AAVSEKKAQIN 382 G+ TY D+A + E+ FD MIYV+ ++ Y +RL V+ K IN Sbjct: 369 GTTTYLLRDIAAALERVEKYQFDKMIYVVSTEQDLYFQRLFKTIELMGYTDVAAKLEHIN 428 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN----------S 432 G + MS R G L ++DE GS M RKN + Sbjct: 429 F-----------GKVMGMSSRLGTVKILSDILDECGSAMHDVM---RKNPAKYEQIENPA 474 Query: 433 ELLD---------------------FDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKD 470 E+ D FD K+ + P Y+QYA+AR SI R+ Sbjct: 475 EVADTLGITAVMVQDMAGKRIHNYPFDIAKMTSFEGDTGP--YLQYAHARLCSIVRKV-- 530 Query: 471 IFPDLDFDLFPRNVIPQESEF--DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 D+ P+ + + + ++ +A+YP V NA EP + YL+ L Sbjct: 531 -------DIDPKEITTANFSLLKEPHAINILRLMAQYPDVTCNAVKTLEPTTILTYLFRL 583 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573 A + ++ + A + ++T+ RL L ++ + Sbjct: 584 AHQVSSGYD------VIKVIGAESHEVTVARLALYEGARQVLENA 622 >gi|55859659|emb|CAI10898.1| arginyl-tRNA synthetase 2, mitochondrial [Homo sapiens] Length = 205 Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 9/125 (7%) Query: 54 SRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEY 112 SRP D A+ + +++ D V + G+ +N ++ L K +L ++ G +Y Sbjct: 84 SRP---DIQVQAKRLAEKLRCDTVVSEI-STGQRTVNFKINRELLTKTVLQQVIEDGSKY 139 Query: 113 G-RNLIGKG---TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIN 168 G ++ + G K+ +EF S N HVGH R ++G+ +A+L G++V R Y+ Sbjct: 140 GLKSELFSGLPQKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVIRINYLG 199 Query: 169 DAGAQ 173 D G Q Sbjct: 200 DWGMQ 204 >gi|328708076|ref|XP_001946117.2| PREDICTED: probable arginyl-tRNA synthetase, mitochondrial-like [Acyrthosiphon pisum] Length = 572 Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 102/497 (20%), Positives = 192/497 (38%), Gaps = 97/497 (19%) Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 I+F S N P HVGH R ++G+ +++L F V R Y+ D G Q L + + Sbjct: 125 IDFSSPNIAKPFHVGHLRSTIIGNFISNLRNFIDGRVVRINYLGDWGPQFGYTLLGL-EQ 183 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 + + N+ + + + + K D S+ K Sbjct: 184 MKPDISKNNMTIESLHNAYILANQMAKN----------------------DSSIHDKAKS 221 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 I +DL+ N DI ++F + + I R G V++ K + D+ Sbjct: 222 IFNDLECGNSTSDINTLWNEFRSITINELEVI---YKRLGIVFDEYDWESKYSKEKIQDV 278 Query: 305 DRKQL----LFR------STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMI 353 KQL L + + ++ ++ + +LK+D S Y D+A +++ G +++ Sbjct: 279 -LKQLSKIGLLKVKEDGSTVVLSNNQETTILKNDNSTLYITRDIAAALRRHKYYGSEDLF 337 Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 YV+ + S + L+++ A ++ + INV R++ MS R G I L + Sbjct: 338 YVVDNTQSKHFYLLKSLIAQIN---SNINVHHIPFGRIH------GMSSRKGQGILLDQL 388 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFD-----------------FCKVKEQSKENPVFY--- 453 +++ S M+L RK SE + +K++ K++ F Sbjct: 389 LNQAKST----MVLKRKYSETTKINSMDDNEVADVLGISAIVINDLKQKRKKDYNFSWES 444 Query: 454 ---------VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 ++ Y CR + + + L P VI E +T L LI+ + Sbjct: 445 ALQVNGDTGIKLQYTHCRLLSLEEVNCNITL-----PDEVIA-ECFTETVALDLILEICR 498 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTM--MRLQL 562 + V+ E L YL+ L++ N L+ + N T+ R+ L Sbjct: 499 FEDVLTETNQELEACILVNYLFRLSNCI---------NKALKVLNVKNSSSTIAQQRILL 549 Query: 563 VHAVASIINSGLNIIGV 579 + +++G+ I+G+ Sbjct: 550 FYRARETLSAGMKILGL 566 >gi|74185395|dbj|BAE30171.1| unnamed protein product [Mus musculus] Length = 397 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 69/300 (23%), Positives = 122/300 (40%), Gaps = 38/300 (12%) Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVS 375 G V ++KSDG YTY +DLA K + +E + +IYV+ + + + + + A A + Sbjct: 105 GCSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYVVDNGQAIHFQTIFAAAQMIG 164 Query: 376 -------------------EKKAQINVLLCELVRLY---RDGMPIKMSK---RAGDFI-- 408 E K + E VRL +G+ M K + D + Sbjct: 165 WYDPKVTLVTHVGFGVVLGEDKKKFKTRSGETVRLMDLLEEGLKRSMDKLKEKERDKVLT 224 Query: 409 --TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466 L+ V +++ L F F K+ + + N Y+ YA+ R RSI R Sbjct: 225 EEELKAAQTSVAYGCIKYADLSHNRLNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIAR 283 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 A ++D + R + D E +L + +P +++ + L Y+ Sbjct: 284 LA-----NIDEAMLQRAARETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYI 338 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 Y+LA+ F + + R K+ M R+ L AVA+++ G +I+G++ M Sbjct: 339 YELATTFTEFYDSCYCVEKDR-QTGKVLKVNMWRMLLCEAVAAVMAKGFDILGIKPVQRM 397 >gi|170052268|ref|XP_001862145.1| arginyl-tRNA synthetase 2 [Culex quinquefasciatus] gi|167873170|gb|EDS36553.1| arginyl-tRNA synthetase 2 [Culex quinquefasciatus] Length = 228 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 32/60 (53%) Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 K +EF S N P H GH R ++G+ LA+L G++V R Y+ D G Q L L V Sbjct: 106 KTLVEFSSPNIAKPFHAGHLRSTIIGNFLANLYDHLGHDVVRLNYLGDWGTQFGYLKLGV 165 >gi|218461787|ref|ZP_03501878.1| putative arginyl-tRNA synthetase [Rhizobium etli Kim 5] Length = 184 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 13/150 (8%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKIL 102 G L N M L++ G + +A + A + D D V +AG GF+N LS + Sbjct: 35 GDLQCNEMMRLAKATGKNTHDLAASVAAAARNDV-FDEVSVAGPGFVNFRLSNETIAAEA 93 Query: 103 SSIV---VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGY 159 S+++ G E R + + I+F N +HVGH R V+G++L +++ G+ Sbjct: 94 SAMLGDPALGAEKQRPI-----RTVIDFGGPNVAKALHVGHLRSFVIGESLRRILSEIGH 148 Query: 160 EVTREYYINDAGAQINTL----ALSVFWRY 185 +V + ++ D G Q+ L A++ W++ Sbjct: 149 DVISDIHLGDWGLQMGKLLYGAAIASGWQH 178 >gi|83273903|ref|XP_729602.1| arginyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL] gi|23487879|gb|EAA21167.1| arginyl-tRNA synthetase, putative [Plasmodium yoelii yoelii] Length = 1643 Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/192 (22%), Positives = 76/192 (39%), Gaps = 45/192 (23%) Query: 43 GHLSTNAAMILSRPLGLD---------PLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 GH N A+ + + G + L+I E I + D + + +GFI + + Sbjct: 37 GHFQCNNAINIYKKYGKELNFENAHKVSLSIIENINENL-----FDDINASPQGFITVKI 91 Query: 94 SPSYLRKIL----------SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143 S Y+ K L ++ + I G N K V I+F S N MHVGH R Sbjct: 92 SKDYIEKSLLKLYKNNKININVDMDEINDGNN--AKYENVLIDFSSPNIAKEMHVGHLRS 149 Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-------------------ALSVFWR 184 ++GD++ + F + R ++ D G Q + +L++ ++ Sbjct: 150 TIIGDSICKIFEFLKVKTHRVNHVGDWGTQFGMIINYIITNYPNYKEEMPELKSLTLLYQ 209 Query: 185 YQQALYNNDSDL 196 + Y+ND D Sbjct: 210 EAKKCYDNDKDF 221 >gi|70952033|ref|XP_745212.1| arginyl-tRNA synthetase [Plasmodium chabaudi chabaudi] gi|56525464|emb|CAH75311.1| arginyl-tRNA synthetase, putative [Plasmodium chabaudi chabaudi] Length = 523 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 26/173 (15%) Query: 43 GHLSTNAAMILSRPLGLD---------PLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 GH N A+ + + G + L+I E I + + + + +GFI + + Sbjct: 40 GHFQCNNAINIFKKYGKELNFENAHKISLSIIENINETL-----FEDINASPQGFITVKI 94 Query: 94 SPSYLRKILSSIVVSG---IEYGRNLIGKGT-----KVNIEFVSANPTGPMHVGHCRCAV 145 S SY+ K L + + I N I G V I+F S N MHVGH R + Sbjct: 95 SRSYIEKSLLKLYENNKINISVDMNEINDGNDAKFENVLIDFSSPNIAKEMHVGHLRSTI 154 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198 +GDT++ + F + R ++ D G Q + V Y N ++PE Sbjct: 155 LGDTISKVFEFLKVKTHRVNHVGDWGTQFGMIINYVVTNYP----NYKEEMPE 203 >gi|295836506|ref|ZP_06823439.1| arginine-tRNA ligase [Streptomyces sp. SPB74] gi|295826064|gb|EFG64651.1| arginine-tRNA ligase [Streptomyces sp. SPB74] Length = 324 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 3/95 (3%) Query: 11 LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 L++ ++E +V + + +R+ + PR +G + N A++ + P PL +A L+ Sbjct: 14 LRHAVRE-GAVAEVSEGVAERVTVAVPRPGGYGDYACNVALLAAGPARTSPLALAALLRE 72 Query: 71 RIKIDPDVDSVFIAGKGFINLYLS--PSYLRKILS 103 R++ DP + V + G GF+N L+ SY R +++ Sbjct: 73 RLRHDPRLAEVRVTGPGFLNFRLAGPASYERDVVA 107 Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust. Identities = 55/209 (26%), Positives = 87/209 (41%), Gaps = 18/209 (8%) Query: 379 AQINVLLCELVRLYR-DGMPIKMSKRAGDFITLR---HVVDEVGSDSVRFMMLWRKNSEL 434 A+ +VL LVRL R G ++ G+ + + D+ R+ +L +E Sbjct: 128 ARAHVLAEALVRLVRAQGGEARLDATGGEPLRAAPPYEATAPLDPDTRRWALLHTAPAER 187 Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTS 494 D + Q ENP+F V+YA+AR R++ R A D+ P+ + Sbjct: 188 PRLD-AGLLVQRVENPLFLVRYAHARARALVRNAADL-----------GYGPEPGDSGPE 235 Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554 L+ LAE+P V+ A + P +LA L LA G H R L Sbjct: 236 AAPLLALLAEHPAVLLRAAEHRAPDRLARRLVRLADALLGF--HDRTGGLLPLGGLKPLA 293 Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPN 583 RL L A +++ GL ++G+ +P Sbjct: 294 AHRARLALAEAAGTVLAGGLTLLGISAPQ 322 >gi|225683425|gb|EEH21709.1| arginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03] Length = 609 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 68/158 (43%), Gaps = 16/158 (10%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 IER + AHG + +I++R L L +I +L + P SVFI N + Sbjct: 61 IERTQVLAHG----DVVLIVAR-LRLKGDSIGQLFALPLISCPSSKSVFIPIH--FNETI 113 Query: 94 SPSYL-------RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 P + R + +G+ +N KV +EF S N H GH R ++ Sbjct: 114 LPRLILPYIFDRRHLYGQDTSTGLRGAKNEAAGRKKVIVEFSSPNIAKEFHAGHLRSTII 173 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 G ++ L G++V + Y+ D G Q LA V W+ Sbjct: 174 GAYISYLYGNMGWDVLKINYLGDWGKQFGLLA--VGWQ 209 >gi|158299141|ref|XP_319244.3| AGAP010086-PA [Anopheles gambiae str. PEST] gi|157014226|gb|EAA14606.3| AGAP010086-PA [Anopheles gambiae str. PEST] Length = 568 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 31/57 (54%) Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 +EF S N P H GH R ++G+ L++L F G V R Y+ D G Q LAL V Sbjct: 117 VEFSSPNIAKPFHAGHLRSTILGNFLSNLNEFLGNRVLRLNYLGDWGTQFGYLALGV 173 >gi|284042472|ref|YP_003392812.1| Arginyl-tRNA synthetase-like protein [Conexibacter woesei DSM 14684] gi|283946693|gb|ADB49437.1| Arginyl-tRNA synthetase-like protein [Conexibacter woesei DSM 14684] Length = 580 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 73/329 (22%), Positives = 143/329 (43%), Gaps = 43/329 (13%) Query: 63 TIAELIVARIKIDP--DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR------ 114 +A+ V ++ DP D DSV + F+ + + + +G+E GR Sbjct: 50 ALADAAVEVLRADPALDADSVTQEQQRFLMRFTDARI------AELGAGLEEGRLPGMET 103 Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 + G + ++F N T +H+GH R +G ++S + +G V R+ +I DAG + Sbjct: 104 RDLRAGERAIVDFCDPNATKALHIGHLRNIALGQAISSALRAAGAHVERQSHIGDAGRSM 163 Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPG-VYLKHVGKE--LADKYSSELLNFPEEKWLP 231 AL+ + RY + ++ + + G +Y ++ +E +AD + P + L Sbjct: 164 GE-ALAGYRRYAEPGTPAEAGVKSDQFVGDLYARYAREESPIADVADE---DAPVARDLD 219 Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291 D + Q + I +DD A+ + + RG + + LAR G +E IL Sbjct: 220 ERDDLAQQLLTGIEQDDADAVALWRTV--------RG--WAVAGQNETLARLGVHFERIL 269 Query: 292 --PPPKSKTTQKCDMDRKQLLF----RST---MVGDDV--DRPLLKSDGSYTYFAADLAY 340 ++T + + ++ +F R T + GDD PL ++DG T+ +A Sbjct: 270 YDSDRTARTAEVARLGIERGVFVREERGTVAYLTGDDSYPVMPLTRADGFPTHHLRVVAM 329 Query: 341 FK-CKYERGFDNMIYVMGSDHSGYVKRLE 368 ++ + +I++ G + +V+ +E Sbjct: 330 WRDMMIDEEGSALIHLSGDEWKAHVQHVE 358 >gi|84998060|ref|XP_953751.1| arginyl-tRNA synthetase [Theileria annulata] gi|65304748|emb|CAI73073.1| arginyl-tRNA synthetase, putative [Theileria annulata] Length = 622 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 108/562 (19%), Positives = 219/562 (38%), Gaps = 128/562 (22%) Query: 117 IGKGT--KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 +GK T V +++ S N +H+GH R +G +++L+ FSG +V R ++ D G Q Sbjct: 96 VGKLTDETVLVDYFSPNVGKNLHMGHIRSLGLGQAISNLLDFSGSKVIRRNHVGDFGLQS 155 Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD---------KYSSE----- 220 + RY + D+ E P + +EL +YS E Sbjct: 156 -----GIIMRY---IIEYDTRAMEALNPATCNRSFMRELFRYQQIGFSPLEYSYEYNTKN 207 Query: 221 -LLNFPEEKW---LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS----- 271 L+FP + + + DY A K D A + + ++ +++ +P Sbjct: 208 LTLSFPLFAYGLVVDTIDDYYKLAFEKFSSDQEFARRAKIETYLLQNEKSFANPQWENVN 267 Query: 272 -----PIRDIIDNLARQGYVYEGILPPPKSK-------------TTQKCDMDRKQLLFRS 313 DI+D Y +G+ P+S +K D + K++++ Sbjct: 268 HISLVQYNDILDY-----YYIKGLKNIPESLYKNVTNRLIEELIKEKKVDQNDKEVVYTI 322 Query: 314 TMVGDDVDRP---------------LLKSDGSYTYFAADLAYFKCKYERGF---DNMIYV 355 + ++P L +GS TY A DL + G+ D +IYV Sbjct: 323 SKSSKQHNKPDNSDNVEVKKEDKTVLRTREGSLTYMATDLGAL--SHRIGWNKPDRIIYV 380 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKA-QINVL---------------------------LCE 387 ++ + ++L + K A ++N+L C Sbjct: 381 TENNQKSHFQKLYTIIYVQLYKIAKKLNILKTCKMEHVGFGQIGLEGTGKIRSRTGNTCT 440 Query: 388 LVRLYRDGMPIKMSK--RAGDFITLRHVV--DEVGSDSVRFMMLWRKNSELLDFDFCKVK 443 + + + + + K + GD++ L+H + ++G S+ F L + +F ++ Sbjct: 441 IKDITKQVVELVTEKFVKRGDYLRLKHPIAARKIGVGSILFSDLSVEPKSGYNFSIERLM 500 Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503 Q N + + Y+Y R +SI + + + P+ IP + E +L + L Sbjct: 501 NQG-YNLLIAILYSYVRSKSILERCESL---------PQ--IPSNEFRNEYERKLGMLLL 548 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 + +I + +EP+++ YL +L+ F+ + + P + + K+ + +LV Sbjct: 549 GFENMIAASISMREPHRVCKYLTNLSKGFNQFY---EKTPVIV-----DDKVNSLSYKLV 600 Query: 564 HAVASIINSGLNIIGVESPNEM 585 + I GL+I+ +++ ++ Sbjct: 601 KMTSKAIEIGLDILNIQTVKQL 622 >gi|289672020|ref|ZP_06492910.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5] Length = 236 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 1/97 (1%) Query: 81 VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140 V IAG GF+N + + + L L + + R G +V ++ + N MHVGH Sbjct: 8 VEIAGPGFLNFFQNTAALAARLDAALADAHLSVRK-AGAAQRVVVDLSAPNLAKEMHVGH 66 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 R ++GD +A+++ F G V R+ ++ D G Q L Sbjct: 67 LRSTIIGDGVANVLTFLGDTVIRQNHVGDWGTQFGML 103 >gi|226324686|ref|ZP_03800204.1| hypothetical protein COPCOM_02472 [Coprococcus comes ATCC 27758] gi|225207134|gb|EEG89488.1| hypothetical protein COPCOM_02472 [Coprococcus comes ATCC 27758] Length = 178 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 33/126 (26%), Positives = 60/126 (47%), Gaps = 4/126 (3%) Query: 25 EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84 EK++ + RP C + N AM ++ P+ IAE +VA+I + + Sbjct: 32 EKELARVTLSNRPDLCEY---QCNGAMAGAKKYHKAPIMIAEEVVAKIPENGYISGAEAV 88 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 GFINL +P+ + L+ + + G + + I++ N P+HVGH R A Sbjct: 89 KPGFINLKTNPAAVADYLNQMEADE-KLGVEEVENPKTIVIDYGGPNVAKPLHVGHLRSA 147 Query: 145 VVGDTL 150 ++G+++ Sbjct: 148 IIGESV 153 >gi|307171176|gb|EFN63163.1| Probable arginyl-tRNA synthetase, mitochondrial [Camponotus floridanus] Length = 391 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 78/316 (24%), Positives = 135/316 (42%), Gaps = 57/316 (18%) Query: 304 MDRKQLLF----RSTMVGDDVDR--PLLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVM 356 M++ QLL +V D D+ PL+KSDGS Y A D+A ++ER FD M YV+ Sbjct: 99 MEKMQLLVTDEQNRKVVNLDNDKIIPLIKSDGSTLYIARDIAAAIDRFERNNFDCMYYVV 158 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 + + + L + ++ V E ++ R G MS R G+ I L +++ Sbjct: 159 DNTQAEHFSNLLEILR-------RMKVPWVERLKHIRFGRLHGMSTRKGNVIFLEDILN- 210 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF-RQAKDIFPDL 475 + R +M ++ LD K++ S +N + + + R+ +D DL Sbjct: 211 ----TTRDIMKQKQ----LDSCTTKIQLDSTDNSSDILGISAMIINDLKKRRQRDYTFDL 262 Query: 476 D--FDL-----------------FPRN---VIPQESE--FDTSEL--QLIVHLAEYPRVI 509 + FDL RN V+P E E E+ +LIV +A++ ++ Sbjct: 263 NAAFDLKGDTGVKLQYTHCRLINLKRNCGAVLPSECEPSLLREEVVDELIVLIAKFEEIV 322 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 + EP L YL+ L+ V + + + V+ + + RL L H +I Sbjct: 323 LKSYEEMEPCILTGYLFHLSHVINKAFKTLK-------VKNESSDVASQRLLLFHVARNI 375 Query: 570 INSGLNIIGVESPNEM 585 + G+ ++G+ EM Sbjct: 376 LAQGMKLLGLMPLEEM 391 >gi|302536935|ref|ZP_07289277.1| predicted protein [Streptomyces sp. C] gi|302445830|gb|EFL17646.1| predicted protein [Streptomyces sp. C] Length = 316 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/110 (25%), Positives = 54/110 (49%), Gaps = 1/110 (0%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 AD S + ++ ++ + +R+V+ER R G ++ A+ +++ L+P + Sbjct: 4 ADLSRAVVQAVRRAVEGGELAAGVPERVVVERTRPGGVGEYASPVALQVAKSARLEPREV 63 Query: 65 AELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYG 113 A ++ R+ D P + V I G GF+N L+P ++ + V G YG Sbjct: 64 ARVLAGRLLADEPGILGVEITGPGFLNFSLAPLSAAALVREVRVRGTRYG 113 Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 21/146 (14%) Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501 V+++S E F V+YA+AR R++ A D L F P P D L+ Sbjct: 186 VQDESSE--FFRVRYAHARARALGINAGD----LGFVSEPAE--PAGPGDDADGHGLLRL 237 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVF----HGHWSHGRENPRLRFVQANNRKLTM 557 L EYP V+E A Q P +L +L +A H G E P Sbjct: 238 LGEYPLVLEAAAHHQAPERLTRHLVAVADALLDFQHQVLPKGDEKPSAAHRARLALAEAA 297 Query: 558 MRLQLVHAVASIINSGLNIIGVESPN 583 +++ GL ++G+++P+ Sbjct: 298 ---------GTVLAGGLALLGIDAPD 314 >gi|126291425|ref|XP_001380293.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 358 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 69/296 (23%), Positives = 121/296 (40%), Gaps = 42/296 (14%) Query: 323 PLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE----- 376 ++KSDG YTY +DLA K + E D +IYV+ S + + + + A + Sbjct: 72 TIVKSDGGYTYDTSDLAAIKQRLMEEKADIIIYVVDSGQAVHFQAIFVAAQMIGWYDPKV 131 Query: 377 ---KKAQINVLLCE--------------LVRLYRDGMPIKMSK---RAGDFI----TLRH 412 A V+L E L+ L +G+ M K + D + L+ Sbjct: 132 TRVSHAGFGVVLGEDKKKFKTRSGDTVRLIDLLEEGLKRSMDKLKEKERDKVLTPEELKA 191 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 V +R+ L F F K+ + + N Y+ YA+ R RSI R A Sbjct: 192 AQTSVAFGCIRYADLSHNRMNDYIFSFDKMLD-DRGNTAAYLLYAFTRIRSIARLA---- 246 Query: 473 PDLDFDLFPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 ++D ++ + + D E +L + +P +++ + L Y+Y+LA+ Sbjct: 247 -NIDEEMLQKAAKETKIILDHEKEWKLGRCILRFPEILQKILDDLFLHTLCDYIYELATT 305 Query: 532 FHGHW--SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F + + E R K+ M R+ L A A+I+ G +I+G++ +M Sbjct: 306 FTEFYDSCYCVEKDR---QTGKILKVNMWRMLLCEATAAIMAKGFDILGIKPLQKM 358 >gi|313230750|emb|CBY08148.1| unnamed protein product [Oikopleura dioica] Length = 144 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 4/84 (4%) Query: 98 LRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFS 157 +R+I+S I+ G ++ I G ++ ++F S N P H+GH R + G + +L+ Sbjct: 1 MRQIISEILKPG---WKSRIRTGKRIVVDFSSPNIAKPFHLGHLRSTITGQCVCNLLEAQ 57 Query: 158 GYEVTREYYINDAGAQ-INTLALS 180 G+EV R Y+ D ++ IN L ++ Sbjct: 58 GHEVIRVNYLGDWESRAINQLTIA 81 >gi|145232355|ref|XP_001399626.1| arginyl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS 513.88] gi|134056541|emb|CAK47665.1| unnamed protein product [Aspergillus niger] Length = 646 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 64/296 (21%), Positives = 116/296 (39%), Gaps = 60/296 (20%) Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA---------- 372 +++ DG+ Y D+ + E FD MIYV+ + ++ +L + Sbjct: 377 IVRKDGTPLYLTRDIGAILEREEAYKFDKMIYVVAAQQDLHLAQLFKITELMGYKDLASR 436 Query: 373 ----------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL---RHVVDEVGS 419 +S +K + L ++++ RD M M K + + D +G Sbjct: 437 CQHINFGMVRGMSTRKGTVK-FLDDILQDVRDKMHEVMKKNTEKYEQVADPEGTADILGM 495 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 SV + K DF+ + + P Y+QYA+AR SI R++ L+ D Sbjct: 496 SSVMVQDMTGKRINGYDFNLDAMTSFEGDTGP--YLQYAHARLCSIVRKS-----GLNVD 548 Query: 479 LFPRNVIPQESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLA 529 E DT+ L L+ LA++P V+ N T EP + YL+ + Sbjct: 549 -----------ELDTANLSLLTETHATDLARLLAQWPDVLLNTTRTLEPTTILTYLFRMT 597 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V + + V + +L R+ L + ++++G+ I+G+ N M Sbjct: 598 HVLSSSYD-------VLKVVGSEPELKKARMALYESARQVLHNGMRILGLSPVNRM 646 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Query: 119 KGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 KG K + +EF S N P H GH R ++G LA+L G++V + Y+ D G Q L Sbjct: 152 KGRKRIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNYLGDWGKQYGLL 211 Query: 178 A 178 A Sbjct: 212 A 212 >gi|297192062|ref|ZP_06909460.1| arginyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486] gi|297151179|gb|EFH30997.1| arginyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC 25486] Length = 259 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 13/120 (10%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINL 91 + +ERPR G +T A+ L+R G + +A + RI P + +V I G GF+N+ Sbjct: 31 VKVERPRPGGRGDYATGIALRLARQAGRPAVEVAAELGHRIAAAPGIAAVDITGPGFLNI 90 Query: 92 YLSPSYLRKILSSIVVSGIEYG-RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 L P + ++ ++ G +YG +L G +E ++ + R AV+ DTL Sbjct: 91 TLEPDTQQGLVRDVLERGEKYGWTDLTGA-----VEEIT-------YRADVRAAVIADTL 138 >gi|167518127|ref|XP_001743404.1| hypothetical protein [Monosiga brevicollis MX1] gi|163778503|gb|EDQ92118.1| predicted protein [Monosiga brevicollis MX1] Length = 586 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 79/332 (23%), Positives = 134/332 (40%), Gaps = 43/332 (12%) Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EF S N P HVGH R ++G+ L +++ +G VT Y+ D G Q+ + + Sbjct: 120 LEFSSPNIAKPFHVGHLRSTIIGNALRNILEATGERVTAINYLGDWGRQLALVMIG---- 175 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 Q L +D G G + L D + + + + P + + + + + Sbjct: 176 --QDLLASDGTTSAGSSAG---SNAPPGLHDLFRAYVAANKAAEADPTILQRA-RDLHRE 229 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV----YEG---ILPPPKSK 297 + L A + QH + + R S D +++ R +V YEG +P +S Sbjct: 230 LEQALVAGDAQHPLL----NRWRALRSDSIDAYEHIYRALHVRFDAYEGESNYVPGARSL 285 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRP---LLKSDGSYTYFAADLAYFKCKYE--RGFDNM 352 + + + + V D D P L K+DGS TY DLA + G D Sbjct: 286 GDRLSALPGAR-VDHGAWVADFADLPTCVLQKADGSSTYLLRDLAAALERAARPEGPDRT 344 Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412 IYV G + K+L+A+ AA+ + + G+ MS R G + L Sbjct: 345 IYVAGGAQDVHFKQLQALLAAMGRSEVATGLQHVGF------GLIKGMSTRQGTVVFLDD 398 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 ++ E F M S++L + K++E Sbjct: 399 LLRE-----TEFHM-----SQVLSLNPQKLRE 420 >gi|333024413|ref|ZP_08452477.1| putative arginyl-tRNA synthetase [Streptomyces sp. Tu6071] gi|332744265|gb|EGJ74706.1| putative arginyl-tRNA synthetase [Streptomyces sp. Tu6071] Length = 326 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 20/147 (13%) Query: 17 EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP 76 E+D V +L R+ + PR +G + N A++ + PL +A L+ R++ DP Sbjct: 22 EVDS---VAADVLARVTVAVPRPGGYGDYACNVALVAAGAARTSPLALAALLRERLRHDP 78 Query: 77 DVDSVFIAGKGFINLYLS--PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG 134 + V + G GF+N L+ +Y R +++ + YG L G V+ P G Sbjct: 79 RLADVRVTGPGFLNFALADPGTYERDLVAETLAP--RYGDALAG-------HHVTLRPLG 129 Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEV 161 R V+ + +A L G EV Sbjct: 130 ------ARAHVLAEAVARLTRAQGGEV 150 >gi|317146750|ref|XP_001821636.2| arginyl-tRNA synthetase, cytoplasmic [Aspergillus oryzae RIB40] Length = 647 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 31/57 (54%) Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 K+ +EF S N P H GH R ++G LA+L G++V + Y+ D G Q LA Sbjct: 157 KIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNYLGDWGKQYGLLA 213 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 61/296 (20%), Positives = 114/296 (38%), Gaps = 60/296 (20%) Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 +++ DG+ Y D+ + E FD MIYV+ ++ +L + + K Sbjct: 378 IIRKDGTPLYLTRDIGAITEREEAYHFDKMIYVVAMQQDLHLAQLFKITELMGHKDLASR 437 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE--------- 433 C+ V GM MS R G T++ + D +G + + +KN E Sbjct: 438 ---CQHVNF---GMVRGMSTRKG---TVKFLDDILGDVRDKMHEVMKKNEEKYQQVENPE 488 Query: 434 ----LLDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRSIFRQAKDIF 472 +L V++ S + + Y+QYA+AR SI R+++ Sbjct: 489 ETADILGITSVMVQDMSGKRINGYDFNLDAMTSFEGDTGPYLQYAHARLCSIIRKSELNV 548 Query: 473 PDL---DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 +L + DL +T L LA++P V+ N T EP + YL+ + Sbjct: 549 EELGSANLDLLT----------ETHATDLARMLAQWPDVLLNTTRTLEPCTILQYLFKMT 598 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + V + +L R+ L + ++ +G+ ++G+ + M Sbjct: 599 HTLSSSY-------EVLKVVGSEPELKKARMALYESARQVLYNGMRVVGLSPVSRM 647 >gi|83769499|dbj|BAE59634.1| unnamed protein product [Aspergillus oryzae] Length = 651 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 31/57 (54%) Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 K+ +EF S N P H GH R ++G LA+L G++V + Y+ D G Q LA Sbjct: 157 KIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNYLGDWGKQYGLLA 213 Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust. Identities = 60/290 (20%), Positives = 112/290 (38%), Gaps = 60/290 (20%) Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 +++ DG+ Y D+ + E FD MIYV+ ++ +L + + K Sbjct: 378 IIRKDGTPLYLTRDIGAITEREEAYHFDKMIYVVAMQQDLHLAQLFKITELMGHKDLASR 437 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE--------- 433 C+ V GM MS R G T++ + D +G + + +KN E Sbjct: 438 ---CQHVNF---GMVRGMSTRKG---TVKFLDDILGDVRDKMHEVMKKNEEKYQQVENPE 488 Query: 434 ----LLDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRSIFRQAKDIF 472 +L V++ S + + Y+QYA+AR SI R+++ Sbjct: 489 ETADILGITSVMVQDMSGKRINGYDFNLDAMTSFEGDTGPYLQYAHARLCSIIRKSELNV 548 Query: 473 PDL---DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 +L + DL +T L LA++P V+ N T EP + YL+ + Sbjct: 549 EELGSANLDLLT----------ETHATDLARMLAQWPDVLLNTTRTLEPCTILQYLFKMT 598 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 + + V + +L R+ L + ++ +G+ ++G+ Sbjct: 599 HTLSSSY-------EVLKVVGSEPELKKARMALYESARQVLYNGMRVVGL 641 >gi|328672623|gb|AEB26870.1| arginyl-tRNA synthetase, degenerate [Anaplasma phagocytophilum HZ] Length = 57 Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 22/46 (47%), Positives = 32/46 (69%), Gaps = 1/46 (2%) Query: 158 GYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203 GY+VT++YY+NDA +Q+ TL VF RY++AL + + G YPG Sbjct: 2 GYDVTKKYYVNDAVSQVKTLVSPVFLRYKEAL-EEEITIGAGLYPG 46 >gi|119481669|ref|XP_001260863.1| arginyl-tRNA synthetase [Neosartorya fischeri NRRL 181] gi|119409017|gb|EAW18966.1| arginyl-tRNA synthetase [Neosartorya fischeri NRRL 181] Length = 664 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 11/101 (10%) Query: 89 INLYLSPSYLRK-ILSSIVVSGIEYGRNL---------IGKGTK-VNIEFVSANPTGPMH 137 + + P L K ++S I+ +G N KG K + +EF S N P H Sbjct: 112 LQFFFKPEPLTKTVISRILKEKATFGTNGNQGLRDPADPSKGKKRIIVEFSSPNIAKPFH 171 Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 GH R ++G LA+L G++V + Y+ D G Q LA Sbjct: 172 AGHLRSTIIGGFLANLYTVMGWDVIKMNYLGDWGKQYGLLA 212 Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust. Identities = 62/289 (21%), Positives = 115/289 (39%), Gaps = 49/289 (16%) Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA---------- 372 +++ DG+ Y D+ + E FD MIYV+ + ++ +L + Sbjct: 377 IVRKDGTPLYLTRDIGAIMERDEAYHFDKMIYVVAAQQDLHLAQLFKITELMGRKDVASR 436 Query: 373 ----------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGS 419 +S +K + L +++R D M M A + + + D +G Sbjct: 437 CQHINFGMVRGMSTRKGTVK-FLDDILRDVADKMHEVMKGNAEKYAQVENPEETADILGL 495 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-- 476 SV + K DF+ + + P Y+QYA+AR SI R++ +LD Sbjct: 496 TSVMVQDMTGKRINGYDFNLDAMTSFEGDTGP--YLQYAHARLCSIVRKSGLNVEELDSA 553 Query: 477 -FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 DL + + L+ LA +P V+ N T EP + YL+ + + Sbjct: 554 NLDLLT----------EPHAVDLVRLLATWPDVLLNTTKTLEPTTILTYLFRMTHILSSS 603 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 + + V + +L R+ L A ++++G+ ++G+ SP E Sbjct: 604 YD-------VLKVVGSEPELKKARMALYEAARQVLHNGMRVLGL-SPVE 644 >gi|167461683|ref|ZP_02326772.1| arginine-tRNA ligase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 155 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 1/86 (1%) Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143 A +INL+ +PS +L +++ E+G+ +G+G +V I+ S N P +GH R Sbjct: 71 AAGPYINLFFTPSVYGDLLLQGMMN-PEFGKPDLGQGKRVIIDMSSPNIAKPFGIGHLRS 129 Query: 144 AVVGDTLASLMAFSGYEVTREYYIND 169 V+G+ L +L +G+E ++ D Sbjct: 130 TVIGNALYNLYKETGFEPVSVNHLGD 155 >gi|296812237|ref|XP_002846456.1| arginyl-tRNA synthetase [Arthroderma otae CBS 113480] gi|238841712|gb|EEQ31374.1| arginyl-tRNA synthetase [Arthroderma otae CBS 113480] Length = 645 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 20/172 (11%) Query: 58 GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL- 116 G P IA I ++ V+ + G + ++ SI+ + YG N Sbjct: 82 GKKPQEIAADIASKFPKSDLVEPPVVVGAHLQFFFSHKPLTEYVIRSILENKDAYGSNAN 141 Query: 117 IG--------KGTK-VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167 +G KG K V +EF S N P H GH R ++G +A+L G++V + Y+ Sbjct: 142 VGLQDQKDPSKGKKKVVVEFSSPNIAKPFHAGHLRSTIIGGFIANLYTVLGWDVLKINYL 201 Query: 168 NDAGAQINTLALSVFWRYQQALYNNDSDL---PEGYYPGVYLKHVGKELADK 216 D G Q LA Y++ Y ++ DL P + VY+K + K++A++ Sbjct: 202 GDWGKQYGLLANG----YEK--YGSEEDLLKDPINHLFEVYVK-INKDVAEQ 246 Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust. Identities = 65/291 (22%), Positives = 117/291 (40%), Gaps = 62/291 (21%) Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 +++ DG+ Y D+A + ++ FD MIYV+ + ++ +L V +K Sbjct: 377 VIRKDGTPLYLTRDIAAIVERDDKYHFDKMIYVVAAQQELHLAQLFKTTELVGKKDLASR 436 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN----------- 431 CE V GM MS R G L ++ +VG M +KN Sbjct: 437 ---CEHVSF---GMVRGMSTRKGTVKFLNDILKDVGEKMHEVM---QKNPAKYEQIEDPV 487 Query: 432 --SELLDFDFCKVKEQSK----------ENPVF-------YVQYAYARCRSIFRQAKDIF 472 +++L V++ S EN Y+QYA+AR S+ R+A +I Sbjct: 488 ATADVLGITSVMVQDMSGKRINGYEFNLENMTSFEGDTGPYLQYAHARVCSVTRKA-EIK 546 Query: 473 P----DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 P D D L ++ + LI LA++P V+ NA+ EP + YL+ + Sbjct: 547 PEELGDADLSLLT----------ESHAIDLIRLLAQWPDVVFNASKTLEPCTILTYLFRM 596 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 + + V + + R+ L + ++++G+ ++G+ Sbjct: 597 THTLSSGYD-------VLKVVGSEPGVKKARMALYESARQVLHNGMRLLGL 640 >gi|238497145|ref|XP_002379808.1| arginyl-tRNA synthetase [Aspergillus flavus NRRL3357] gi|220694688|gb|EED51032.1| arginyl-tRNA synthetase [Aspergillus flavus NRRL3357] Length = 709 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 31/57 (54%) Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 K+ +EF S N P H GH R ++G LA+L G++V + Y+ D G Q LA Sbjct: 219 KIIVEFSSPNIAKPFHAGHLRSTIIGGFLANLYTVMGWDVIKMNYLGDWGKQYGLLA 275 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 61/296 (20%), Positives = 114/296 (38%), Gaps = 60/296 (20%) Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 +++ DG+ Y D+ + E FD MIYV+ ++ +L + + K Sbjct: 440 IIRKDGTPLYLTRDIGAITEREEAYHFDKMIYVVAMQQDLHLAQLFKITELMGHKDLASR 499 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSE--------- 433 C+ V GM MS R G T++ + D +G + + +KN E Sbjct: 500 ---CQHVNF---GMVRGMSTRKG---TVKFLDDILGDVRDKMHEVMKKNEEKYQQVENPE 550 Query: 434 ----LLDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRSIFRQAKDIF 472 +L V++ S + + Y+QYA+AR SI R+++ Sbjct: 551 ETADILGITSVMVQDMSGKRINGYDFNLDAMTSFEGDTGPYLQYAHARLCSIIRKSELNV 610 Query: 473 PDL---DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 +L + DL +T L LA++P V+ N T EP + YL+ + Sbjct: 611 EELGSANLDLLT----------ETHATDLARMLAQWPDVLLNTTRTLEPCTILQYLFKMT 660 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + V + +L R+ L + ++ +G+ ++G+ + M Sbjct: 661 HTLSSSY-------EVLKVVGSEPELKKARMALYESARQVLYNGMRVVGLSPVSRM 709 >gi|146322998|ref|XP_755736.2| arginyl-tRNA synthetase [Aspergillus fumigatus Af293] gi|129558565|gb|EAL93698.2| arginyl-tRNA synthetase [Aspergillus fumigatus Af293] Length = 646 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 11/101 (10%) Query: 89 INLYLSPSYLRK-ILSSIVVSGIEYGRNL---------IGKGTK-VNIEFVSANPTGPMH 137 + + P L K ++S I+ +G N KG K + +EF S N P H Sbjct: 112 LQFFFKPEPLTKTVISRILKEKAAFGTNGNQGLRDPSDPSKGKKRIIVEFSSPNIAKPFH 171 Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 GH R ++G LA+L G++V + Y+ D G Q LA Sbjct: 172 AGHLRSTIIGGFLANLYTVMGWDVIKMNYLGDWGKQYGLLA 212 Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust. Identities = 62/289 (21%), Positives = 115/289 (39%), Gaps = 49/289 (16%) Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA---------- 372 +++ DG+ Y D+ + E FD MIYV+ + ++ +L + Sbjct: 377 IVRKDGTPLYLTRDIGAIMERDEAYHFDKMIYVVAAQQDLHLAQLFKITELMGRKDLASR 436 Query: 373 ----------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGS 419 +S +K + L +++R D M M A + + + D +G Sbjct: 437 CQHINFGMVRGMSTRKGTVK-FLDDILRDVADKMHEVMKGNAEKYAQVENPEETADILGL 495 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-- 476 SV + K DF+ + + P Y+QYA+AR SI R++ +LD Sbjct: 496 TSVMVQDMTGKRINGYDFNLDAMTSFEGDTGP--YLQYAHARLCSIVRKSGLNVEELDSA 553 Query: 477 -FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 DL + + L+ LA +P V+ N T EP + YL+ + + Sbjct: 554 NLDLLT----------EPHAVDLVRLLATWPDVLLNTTKTLEPTTILTYLFRMTHILSSS 603 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 + + V + +L R+ L A ++++G+ ++G+ SP E Sbjct: 604 YD-------VLKVVGSEPELKKARMALYEAARQVLHNGMRVLGL-SPVE 644 >gi|159129792|gb|EDP54906.1| arginyl-tRNA synthetase [Aspergillus fumigatus A1163] Length = 667 Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 11/101 (10%) Query: 89 INLYLSPSYLRK-ILSSIVVSGIEYGRNL---------IGKGTK-VNIEFVSANPTGPMH 137 + + P L K ++S I+ +G N KG K + +EF S N P H Sbjct: 112 LQFFFKPEPLTKTVISRILKEKAAFGTNGNQGLRDPSDPSKGKKRIIVEFSSPNIAKPFH 171 Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 GH R ++G LA+L G++V + Y+ D G Q LA Sbjct: 172 AGHLRSTIIGGFLANLYTVMGWDVIKMNYLGDWGKQYGLLA 212 Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust. Identities = 62/289 (21%), Positives = 115/289 (39%), Gaps = 49/289 (16%) Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAA---------- 372 +++ DG+ Y D+ + E FD MIYV+ + ++ +L + Sbjct: 377 IVRKDGTPLYLTRDIGAIMERDEAYHFDKMIYVVAAQQDLHLAQLFKITELMGRKDLASR 436 Query: 373 ----------AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH---VVDEVGS 419 +S +K + L +++R D M M A + + + D +G Sbjct: 437 CQHINFGMVRGMSTRKGTVK-FLDDILRDVADKMHEVMKGNAEKYAQVENPEETADILGL 495 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLD-- 476 SV + K DF+ + + P Y+QYA+AR SI R++ +LD Sbjct: 496 TSVMVQDMTGKRINGYDFNLDAMTSFEGDTGP--YLQYAHARLCSIVRKSGLNVEELDSA 553 Query: 477 -FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 DL + + L+ LA +P V+ N T EP + YL+ + + Sbjct: 554 NLDLLT----------EPHAVDLVRLLATWPDVLLNTTKTLEPTTILTYLFRMTHILSSS 603 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 + + V + +L R+ L A ++++G+ ++G+ SP E Sbjct: 604 YD-------VLKVVGSEPELKKARMALYEAARQVLHNGMRVLGL-SPVE 644 >gi|302521926|ref|ZP_07274268.1| arginyl tRNA synthetase [Streptomyces sp. SPB78] gi|302430821|gb|EFL02637.1| arginyl tRNA synthetase [Streptomyces sp. SPB78] Length = 326 Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust. Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 20/147 (13%) Query: 17 EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP 76 E+D V +L R+ + PR +G + N A++ + PL +A L+ R++ DP Sbjct: 22 EVDS---VAADVLARVTVGVPRPGGYGDYACNVALVAAGAARTSPLALAALLRERLRHDP 78 Query: 77 DVDSVFIAGKGFINLYLS--PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG 134 + + + G GF+N L+ +Y R +++ + YG L G V+ P G Sbjct: 79 RLADIRVTGPGFLNFALADPGTYERDLVAETLAP--RYGDALAG-------HHVTLRPLG 129 Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEV 161 R V+ + +A L G EV Sbjct: 130 ------ARAHVLAEAVARLTRAQGGEV 150 >gi|291437229|ref|ZP_06576619.1| arginyl tRNA synthetase [Streptomyces ghanaensis ATCC 14672] gi|291340124|gb|EFE67080.1| arginyl tRNA synthetase [Streptomyces ghanaensis ATCC 14672] Length = 351 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 25/146 (17%) Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ-LIVHLA 503 Q ++NP+F V+YA+AR R++ R A D+ P+ +++Q L LA Sbjct: 226 QREDNPLFRVRYAHARTRALLRNAADL-----------GFAPEPGPVTGADVQPLFQALA 274 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLA----SVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 ++PRV+ A + P +LA +L +A + G E P Sbjct: 275 DHPRVLAAAAAHRAPDRLARHLVAVADATPPLLPAVLPVGEEKPSAAHRARLALADAA-- 332 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 +++ GL+++G+++P+ + Sbjct: 333 -------GTVLAGGLSLLGIDAPDHL 351 Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 43/86 (50%) Query: 28 ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87 + +R+V+ PR G +TN A+ L+ P G +AE++ + D + V + G G Sbjct: 3 VPERVVVAPPRPGGCGDYATNVALRLACPAGEPARRVAEILRPHLLRDGGIAEVVVTGPG 62 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYG 113 F+N+ L + ++ I+ G YG Sbjct: 63 FLNISLRSAAPVALVQEILRCGPRYG 88 >gi|239928903|ref|ZP_04685856.1| arginyl tRNA synthetase [Streptomyces ghanaensis ATCC 14672] Length = 375 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 34/146 (23%), Positives = 65/146 (44%), Gaps = 25/146 (17%) Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ-LIVHLA 503 Q ++NP+F V+YA+AR R++ R A D+ P+ +++Q L LA Sbjct: 250 QREDNPLFRVRYAHARTRALLRNAADL-----------GFAPEPGPVTGADVQPLFQALA 298 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLA----SVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 ++PRV+ A + P +LA +L +A + G E P Sbjct: 299 DHPRVLAAAAAHRAPDRLARHLVAVADATPPLLPAVLPVGEEKPSAAHRARLALADAA-- 356 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 +++ GL+++G+++P+ + Sbjct: 357 -------GTVLAGGLSLLGIDAPDHL 375 Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 43/86 (50%) Query: 28 ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87 + +R+V+ PR G +TN A+ L+ P G +AE++ + D + V + G G Sbjct: 27 VPERVVVAPPRPGGCGDYATNVALRLACPAGEPARRVAEILRPHLLRDGGIAEVVVTGPG 86 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYG 113 F+N+ L + ++ I+ G YG Sbjct: 87 FLNISLRSAAPVALVQEILRCGPRYG 112 >gi|148726490|emb|CAN88096.1| novel protein similar to vertebrate arginyl-tRNA synthetase-like (RARSL, zgc:63702) [Danio rerio] Length = 221 Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 68/155 (43%), Gaps = 27/155 (17%) Query: 44 HLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKIL 102 HL + A+ RP G D + +I+ D V+ V I G+G I+ L+ L +K+L Sbjct: 48 HLLQSGAV---RPDG-DLQNTTHTLARQIRTDAVVEEV-IPGRGVIHFRLNKLLLAQKLL 102 Query: 103 SSI------------VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + ++ + GR L+ EF S N H GH R ++G+ + Sbjct: 103 DQLRSDPDGFGVKSEILRRLRVGRTLV--------EFSSPNIAKKFHAGHLRSTIIGNFI 154 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 A+L G EV R Y+ D G Q L S F R+ Sbjct: 155 ANLKKALGNEVIRVNYLGDWGMQFGLLG-SGFERF 188 >gi|313219483|emb|CBY30407.1| unnamed protein product [Oikopleura dioica] Length = 178 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%) Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ- 173 +LI G ++ ++F S N P H+GH R + G + +L+ G+EV R Y+ D ++ Sbjct: 49 SLITTGKRIVVDFSSPNIAKPFHLGHLRSTITGQCVCNLLEAQGHEVIRVNYLGDWESRA 108 Query: 174 INTLALS 180 IN L ++ Sbjct: 109 INQLTIA 115 >gi|261203070|ref|XP_002628749.1| arginyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081] gi|239590846|gb|EEQ73427.1| arginyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081] Length = 526 Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust. Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 22/165 (13%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTI---AELIVARIKIDPDVDSVFIAGKGFIN 90 I+R + AHG + A + + +D + + ++L + +P VFI Sbjct: 61 IQRTQVLAHGDVMVVVARLRLKGANVDQVALDLSSKLCGISLISNPVPKGVFIP------ 114 Query: 91 LYLSPSYL-----------RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139 ++ S + L R++ ++G++ N KV +EF S N H G Sbjct: 115 IFFSATTLPRLILPYIFDRRQLYGHDKIAGLKQPENEAAGKKKVIVEFSSPNIAKEFHAG 174 Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 H R ++G +A+L G++V + Y+ D G Q LA V W+ Sbjct: 175 HLRSTIIGAYIANLYESMGWDVVKINYLGDWGKQFGLLA--VGWQ 217 >gi|318060726|ref|ZP_07979449.1| arginyl-tRNA synthetase [Streptomyces sp. SA3_actG] Length = 326 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 20/147 (13%) Query: 17 EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP 76 E+D V +L R+ + PR G + N A++ + PL +A L+ R++ DP Sbjct: 22 EVDS---VAADVLARVTVGVPRPGGDGDYACNVALVAAGAARTSPLALAALLRERLRHDP 78 Query: 77 DVDSVFIAGKGFINLYLS--PSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG 134 + V + G GF+N L+ +Y R +++ + YG L G V+ P G Sbjct: 79 RLADVRVTGPGFLNFALADPGTYERDLVAETLAP--RYGDALAG-------HHVTLRPLG 129 Query: 135 PMHVGHCRCAVVGDTLASLMAFSGYEV 161 R V+ + +A L G EV Sbjct: 130 ------ARAHVLAEAVARLTRAQGGEV 150 >gi|297202381|ref|ZP_06919778.1| arginyl tRNA synthetase [Streptomyces sviceus ATCC 29083] gi|197710100|gb|EDY54134.1| arginyl tRNA synthetase [Streptomyces sviceus ATCC 29083] Length = 397 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 23/108 (21%) Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDI-FPDLDFDLFPRN----VIPQESEFDTSELQLI 499 Q + NP+F V+YA+AR R++ R A D+ F D+ PR +P+ +T + + Sbjct: 239 QRESNPLFRVRYAHARTRALSRNAADLGFHAEPGDVHPRGDTEAAVPETGVRETDVQETV 298 Query: 500 VH------------------LAEYPRVIENATIAQEPYKLAFYLYDLA 529 V LA++PRV++ A + P +LA +L +A Sbjct: 299 VAETAVAETVVPDTTTLRNVLADHPRVLQAAAVHHAPDRLARHLVTVA 346 Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 21/126 (16%) Query: 37 PRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPS 96 P C G +TN A+ L+RP G PL +AE++ R+ + V + G GF+N+ L S Sbjct: 38 PGGC--GDYATNVALQLARPAGQPPLRVAEILRQRLVQSDGIGDVVVTGPGFLNISLRGS 95 Query: 97 YLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTG---PMHVGH-CRCAVVGDTLAS 152 ++ I+ G+ YG + PTG +H H R VV D +A Sbjct: 96 G-DALVREILRLGLRYGH--------------AERPTGQLVQLHAPHEVRAVVVMDAVAR 140 Query: 153 LMAFSG 158 ++ G Sbjct: 141 ILRSQG 146 >gi|223935965|ref|ZP_03627879.1| Arginine--tRNA ligase [bacterium Ellin514] gi|223895187|gb|EEF61634.1| Arginine--tRNA ligase [bacterium Ellin514] Length = 302 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 80/333 (24%), Positives = 120/333 (36%), Gaps = 89/333 (26%) Query: 306 RKQLLFRSTMVGDDVDRPLL--KSDGSYTYFAADLAYFKCKYERGFDNMI-YVMGSDHSG 362 +KQ F G+ P L KSDG+ Y DLA + E I YV G Sbjct: 6 QKQDPFLKQEDGEWKPNPALIQKSDGAANYATTDLATLAYRLETWNPAEIAYVTGGPQQL 65 Query: 363 YVKRLEAV------AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 + +++ A+ A V +L E DG P K R+G+ + L ++DE Sbjct: 66 HFQQIFAIFRRWHPEAPVKLAHVWFGSILGE------DGKPFKT--RSGETVKLADLLDE 117 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE---------------------------- 448 + + + + + + + +EQ +E Sbjct: 118 AEERAYKVV-----SDKATERETTVPEEQKREIARVVGLGALKYADLLPNRQSDYVFSWD 172 Query: 449 -------NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV- 500 N Y+QYAYAR RSIFR R I E+ + + L Sbjct: 173 RMLALNGNTAPYLQYAYARIRSIFR---------------RGGIENEASGWSGTISLTAP 217 Query: 501 -------HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN-PRLRFVQANN 552 HL + V+E P L YLY+L+ GH++ EN P L+ A Sbjct: 218 DEIILSKHLLNFSLVLEGVAEEYRPNYLCNYLYELS----GHFARFYENCPVLKSEPAER 273 Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L A ++ GL I+G+E +M Sbjct: 274 ----ASRLLLCDLTARVLKQGLEILGIEVLEQM 302 >gi|4582967|gb|AAD24873.1|AF073777_1 arginyl-tRNA-synthetase [Neisseria meningitidis] Length = 170 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 20/170 (11%) Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R + VG +V++ L + FD+ + + N Y+QYAY R +S+FR+A Sbjct: 16 RKIGKTVGIGAVKYADLSKNRHPDYVFDWDAML-SFEGNTAPYLQYAYTRVQSVFRKAG- 73 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 ++D V+ + E QL L ++ V+++ P+ LA YLY +A+ Sbjct: 74 -----EWDANAPTVLTE-----PLEKQLAAELLKFEDVLQSVRGHAYPHYLAAYLYQIAT 123 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 +F S P L+ A+ RLQL + GL+++G++ Sbjct: 124 LF----SLYEACPILKAEGASRNS----RLQLAKLTGDTLKQGLDLLGID 165 >gi|322692397|gb|EFY84312.1| arginyl-tRNA synthetase [Metarhizium acridum CQMa 102] Length = 611 Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 GK T V IEF S N H GH R ++G L++L SGY V R Y+ D G Q L Sbjct: 142 GKKT-VIIEFSSPNIAKKFHAGHLRSTIIGGFLSNLYEKSGYIVVRTNYLGDWGRQYGLL 200 Query: 178 A 178 A Sbjct: 201 A 201 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 22/149 (14%) Query: 436 DFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDL---DFDLFPRNVIPQESEF 491 DFD ++ + P Y+QYA+AR SIFR+ ++ DF L ++ Sbjct: 475 DFDLDRMTSFEGDTGP--YLQYAHARLCSIFRKVDFTVDEMLKSDFSLLSQS-------- 524 Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ-A 550 + L+ +A++P ++ +A EP + YL+ L + H LR V+ Sbjct: 525 -PHAIGLLRVMAQFPDLVNHALKTLEPTTILTYLFKLTHKLSSSYDH------LRVVEPT 577 Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGV 579 +++ R L + ++ +G+ ++G+ Sbjct: 578 EGPAMSLARASLYYGARQVLRNGMVLLGI 606 >gi|315497731|ref|YP_004086535.1| arginine--tRNA ligase [Asticcacaulis excentricus CB 48] gi|315415743|gb|ADU12384.1| Arginine--tRNA ligase [Asticcacaulis excentricus CB 48] Length = 679 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 25/85 (29%), Positives = 41/85 (48%) Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 +INL LS ++ ++ G +G + G +++ S N +H GH R +VG Sbjct: 120 YINLTLSDGWMLNGAQAVTEIGARFGDSDALMGRSAVVDYSSPNVAKTLHAGHIRSTIVG 179 Query: 148 DTLASLMAFSGYEVTREYYINDAGA 172 L++L SG + R +IND G Sbjct: 180 HVLSNLWERSGADTFRVNHINDFGG 204 Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust. Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 29/139 (20%) Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 YV YA R RSI R+ D N+ E D E L++ + + P+ + A Sbjct: 564 YVVYAACRARSILRKN---------DGGTANIDGVSYEIDAQEADLLLKVQQIPQKVVAA 614 Query: 513 TIAQEPYKLAFYLYDLASVFHGHW------SHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 A P L +L D+A++++ ++ S G NP RL + AV Sbjct: 615 AKAANPSVLVRHLMDVAAIYNSYYTRVPVISDGVANP--------------ARLMITQAV 660 Query: 567 ASIINSGLNIIGVESPNEM 585 + L+I +E P + Sbjct: 661 QVALTRALSICHIECPEAI 679 >gi|182435977|ref|YP_001823696.1| putative arginyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178464493|dbj|BAG19013.1| putative arginyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 360 Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust. Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 2/103 (1%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 AD S + + ++ + + + R+ +ER R G + A+ L+RP GL L I Sbjct: 4 ADLSRTVLHAVRRAVDEDALRAPVPARVRVERSRPGGSGDYACAVALQLARPAGLPALEI 63 Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL--RKILSSI 105 A ++ R+ +P V V I G GF++ L + R +L ++ Sbjct: 64 ARILRERVAAEPGVGRVEITGPGFLSFTLDAPAVGDRAVLGAV 106 Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust. Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 14/189 (7%) Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456 P+ AG+ + + +G D+ R+ +L + ++ Q + NP+F V+Y Sbjct: 186 PVPAGATAGELL------ERLGPDAARWGLLRAAGHDRAALG-PELLVQGEANPLFRVRY 238 Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 A+AR R++ R A + D P P + +D + L +A++P V+ A + Sbjct: 239 AHARARALTRGATAL--GFTADAAPYGESP--APYDEAARPLTDLIADHPGVLLAAARHR 294 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 P ++A L +V H + P L RL L A +++ GL++ Sbjct: 295 APDRVA---RQLEAVAHAFFDFHDSCPSLPAGDEKPSAAHRARLALAEAAGTVLAGGLSL 351 Query: 577 IGVESPNEM 585 +G+ +P + Sbjct: 352 LGIRAPEHL 360 >gi|194690392|gb|ACF79280.1| unknown [Zea mays] Length = 240 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 57/233 (24%), Positives = 96/233 (41%), Gaps = 37/233 (15%) Query: 355 VMGSDHSGY-------VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407 V+GSD + V+ +E + A S K+++ L RL +G + + Sbjct: 31 VLGSDGKRFRTRSTEVVRLVELLDEAKSRSKSEL------LQRLTENGKIVDWTDEE--- 81 Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS-KENPVFYVQYAYARCRSIFR 466 L + VG +V++ L KN+ L ++ F + S K N Y+QYA+AR SI R Sbjct: 82 --LEQTSEAVGYGAVKYADL--KNNRLTNYTFSFEQMLSDKGNTAVYLQYAHARICSIIR 137 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 ++ DL P E L ++L + V+E A P + YLY Sbjct: 138 KSNKDVEDLKMTGAISLDHPDER-------VLGLYLIRFAEVVEEACTNLLPNVVCEYLY 190 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 +L+ +F +++ Q RL L A A ++ N++G+ Sbjct: 191 NLSEMFTKFYTN---------CQVVGSPEETSRLLLCQATAVVMRQCFNLLGI 234 >gi|332267363|ref|XP_003282651.1| PREDICTED: arginyl-tRNA synthetase, cytoplasmic-like [Nomascus leucogenys] Length = 257 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 62/261 (23%), Positives = 115/261 (44%), Gaps = 47/261 (18%) Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR---YQQALY-- 190 MHVGH R ++G++++ L F+GY+V R ++ + + L +F Y LY Sbjct: 1 MHVGHLRSTIIGESISRLFEFAGYDVLR---LSGTKDKTPSFILHIFLEDPLYATGLYPG 57 Query: 191 ----NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV----KDYSVQAMM 242 + ++D P L+ KE ++ +E F + + +V K+ + Sbjct: 58 RERSSKETDYLTVSPPIGDLQLFYKESKKRFDTE-EEFKKRAYQCVVLLQGKNPDITKAW 116 Query: 243 KII----RDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPK 295 K+I R + + DI + E RG+ + DI+ +G+V Sbjct: 117 KLICDVSRQEFNKIYDALDISLIE----RGESFYQDRMYDIVKEFEDRGFV--------- 163 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIY 354 + D D ++++F + G + ++KSDG YTY +DLA K + +E D +IY Sbjct: 164 -----QLD-DGRKIVF---VPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIY 214 Query: 355 VMGSDHSGYVKRLEAVAAAVS 375 V+ + S + + + A A + Sbjct: 215 VVDNGQSVHFQAIFAAAQMIG 235 >gi|307211858|gb|EFN87805.1| Probable arginyl-tRNA synthetase, mitochondrial [Harpegnathos saltator] Length = 391 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 64/304 (21%), Positives = 121/304 (39%), Gaps = 63/304 (20%) Query: 316 VGDDVDRPLLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRLEAVAAAV 374 +G+ + P++KSDGS Y D+A ++ER FD M YV+ + +G+ L + Sbjct: 117 LGNGKNIPVIKSDGSTLYITRDIAAAIDRFERNNFDCMYYVVDNTQAGHFSNLLEIL--- 173 Query: 375 SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD---------EVGSDSVRF- 424 Q+ + E ++ R G M R G+ + L +++ ++ S + + Sbjct: 174 ----KQMEIPWVERLKHIRFGRIHGMRTRKGNVMFLEDILNTARDTMKQRQLDSPTTKVP 229 Query: 425 MMLWRKNSELLDFDFCKVKEQSKE-----------------NPVFYVQYAYARCRSIFRQ 467 M L +S++L + + K+ N +QY + R ++ R Sbjct: 230 MNLTDNSSDILGISAMMINDLKKDRQRDYTFDWDAAFDLKGNTGVKLQYTHCRLVNLERN 289 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQ------LIVHLAEYPRVIENATIAQEPYKL 521 I SE + S LQ LI+ +A++ VI + EP L Sbjct: 290 CGAILT---------------SECEPSLLQEEVVDDLILLIAKFDEVILKSYKEMEPCVL 334 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 YL+ L++ + + R V+ + RL L H +++ G+ ++G+ Sbjct: 335 TAYLFKLSNTVNRAFKTLR-------VKDEPTDVASQRLLLFHVAKNVLAQGMRLLGLTP 387 Query: 582 PNEM 585 +M Sbjct: 388 LEKM 391 >gi|68070611|ref|XP_677217.1| arginyl-tRNA synthetase [Plasmodium berghei strain ANKA] gi|56497245|emb|CAI04834.1| arginyl-tRNA synthetase, putative [Plasmodium berghei] Length = 472 Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust. Identities = 43/192 (22%), Positives = 75/192 (39%), Gaps = 45/192 (23%) Query: 43 GHLSTNAAMILSRPLGLD---------PLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 GH N A+ + + G + L+I E I + D + + +GFI + + Sbjct: 40 GHFQCNNAINIYKKYGKELNFENAHKVSLSIIENINENL-----FDDINASPQGFITVKI 94 Query: 94 SPSYLRKIL----------SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143 S Y+ K L ++ + I G N K V I+F S N MHVGH R Sbjct: 95 SKDYIEKSLLKLYKNNKININVDMDEIHDGNN--AKYENVLIDFSSPNIAKEMHVGHLRS 152 Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTL-------------------ALSVFWR 184 ++GD++ + F + ++ D G Q + +L++ ++ Sbjct: 153 TILGDSICKIFEFLKVKTHTINHVGDWGTQFGMIINYVITNYPNYKEEMPELKSLTLLYQ 212 Query: 185 YQQALYNNDSDL 196 + Y+ND D Sbjct: 213 EAKKCYDNDKDF 224 >gi|326562856|gb|EGE13144.1| arginyl-tRNA synthetase [Moraxella catarrhalis 103P14B1] Length = 127 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 16/137 (11%) Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 N Y+QYAY R RSIF +A LD ++ E + E L V L ++ V Sbjct: 7 NTAPYMQYAYTRIRSIFVRA-----GLDMADIGGEIVIHEDK----ERALAVKLLQFEEV 57 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 + P+ L YL++LA +F + P L +++ K RL+L A Sbjct: 58 LLLVAKDGMPHLLCQYLFELAGIFSSFY---EACPIL----SSDDKTKTSRLRLAALTAK 110 Query: 569 IINSGLNIIGVESPNEM 585 + GL ++G+++ +M Sbjct: 111 TLKQGLQLLGIKTVEKM 127 >gi|302554156|ref|ZP_07306498.1| arginyl tRNA synthetase [Streptomyces viridochromogenes DSM 40736] gi|302471774|gb|EFL34867.1| arginyl tRNA synthetase [Streptomyces viridochromogenes DSM 40736] Length = 357 Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust. Identities = 32/146 (21%), Positives = 60/146 (41%), Gaps = 25/146 (17%) Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ-LIVHLA 503 Q + NP+F V+YA+AR R++ R A D+ P+ S+ L+ L Sbjct: 232 QRETNPLFRVRYAHARTRALLRNAADL-----------GFAPEPGPVHASDTAPLLAALG 280 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLA----SVFHGHWSHGRENPRLRFVQANNRKLTMMR 559 ++PR++ + P +LA +L +A V G E P Sbjct: 281 DHPRLLAASATHHTPDRLARHLVTVADATLPVLPAVLPLGEEKPSAAHRARLALAEAA-- 338 Query: 560 LQLVHAVASIINSGLNIIGVESPNEM 585 +++ GL+++G+++P + Sbjct: 339 -------GTVLAGGLSLLGIDAPEHL 357 Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 1/100 (1%) Query: 28 ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKG 87 + +R V+ P G +TN A+ L+ G P +AE++ AR+ + V + G G Sbjct: 27 VPERAVVTPPGPGGCGDYATNIALQLAGAAGQQPRRVAEILRARLLDECRFTDVVVTGPG 86 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIG-KGTKVNIE 126 F+N+ L + +++ I+ G YG G GT V + Sbjct: 87 FLNVSLRSTASAGLVAEILRRGRRYGHVTTGFSGTAVRLR 126 >gi|322702457|gb|EFY94103.1| arginyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23] Length = 627 Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 2/62 (3%) Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 K+ IEF S N H GH R ++G +A+L G++VT+ Y+ D G Q LA V Sbjct: 160 KIIIEFSSPNIAKEFHAGHLRSTIIGAYIANLYESMGWDVTKVNYLGDWGKQFGLLA--V 217 Query: 182 FW 183 W Sbjct: 218 GW 219 Score = 43.5 bits (101), Expect = 0.093, Method: Compositional matrix adjust. Identities = 65/280 (23%), Positives = 110/280 (39%), Gaps = 40/280 (14%) Query: 329 GSYTYFAADLAYF---KCKYERGFDNMIYVMGSDHSGYVKR----LEAVAAA-VSEKKAQ 380 GS TY D+A + KY FD MIYV+ + Y KR LE + + ++ + Sbjct: 341 GSTTYLLRDVAAILEREVKYN--FDKMIYVVSCEQDLYFKRVFRTLELMGRSDLAGRLQH 398 Query: 381 INV--------------LLCELVRLYRDGMPIKMSKRAGDFITLR---HVVDEVGSDSVR 423 IN LL +++ RD M M + + + V + VG +V Sbjct: 399 INFGKVLGMSSRLGNVQLLGDILDQSRDAMHDVMRRNTTKYAQVEDPESVAESVGISAVM 458 Query: 424 FMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 + K FD ++ + P Y+QY++AR SI R+A ++ Sbjct: 459 VQDMSGKRINNYPFDITRMTSFEGDTGP--YLQYSHARVNSILRKAGLTRQEVAEHCLRH 516 Query: 483 NVIPQESEFDTSE-LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 +E DT + L+ +A+YP V A EP + YL+ L + Sbjct: 517 PTSLEEQFSDTPHCVNLLRLIAQYPDVAAAALRNLEPSTILTYLFRLTHQLSSCYD---- 572 Query: 542 NPRLRFVQANN--RKLTMMRLQLVHAVASIINSGLNIIGV 579 + V N R + + R L ++ +G+ ++G+ Sbjct: 573 ---VVQVTGTNEGRDVMLSRAGLYEGARQVLENGMRLLGL 609 >gi|294669638|ref|ZP_06734705.1| hypothetical protein NEIELOOT_01539 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308551|gb|EFE49794.1| hypothetical protein NEIELOOT_01539 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 131 Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats. Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 18/132 (13%) Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 N Y+QYAY R +S+FR+A ++D V+ + E QL L ++ V Sbjct: 13 NTAPYLQYAYTRVQSVFRKAG------EWDATAPTVLTE-----PLEKQLAAELLKFEDV 61 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 +++ P+ LA YLY +A++F + P L+ + R RLQL Sbjct: 62 LQSVADTAYPHYLAAYLYQIATLFSRFY---EACPILK-SEGTTRN---SRLQLAKLTGD 114 Query: 569 IINSGLNIIGVE 580 + GL+++G++ Sbjct: 115 TLKQGLDLLGID 126 >gi|254382307|ref|ZP_04997667.1| arginyl tRNA synthetase [Streptomyces sp. Mg1] gi|194341212|gb|EDX22178.1| arginyl tRNA synthetase [Streptomyces sp. Mg1] Length = 317 Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust. Identities = 32/142 (22%), Positives = 59/142 (41%), Gaps = 20/142 (14%) Query: 19 DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV 78 + ++ + +R+V++R R G +T A +++ G P +A +I + P + Sbjct: 23 EGELPAGTGVPERVVVDRTRPGGVGEYATAVAFQIAKRAGTAPAEVARVIAGMLAGVPGI 82 Query: 79 DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138 + V I G GF+N L+ +++ + G YG F S + Sbjct: 83 ERVEITGAGFLNFVLAERSAAELVREVRERGARYG-------------FASPD------- 122 Query: 139 GHCRCAVVGDTLASLMAFSGYE 160 G R VVGD + ++ G E Sbjct: 123 GELRARVVGDAVRRILWSQGQE 144 >gi|156555207|ref|XP_001604101.1| PREDICTED: similar to GA10066-PA [Nasonia vitripennis] Length = 564 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 63/292 (21%), Positives = 115/292 (39%), Gaps = 55/292 (18%) Query: 324 LLKSDGSYTYFAADLAYFKCKYERG-FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 ++KSDGS Y D+A +YE+ FD M YV+ + + + L V +A + Sbjct: 298 IIKSDGSSLYITRDIAAAISRYEKNRFDTMYYVVDNAQTDHFINLIGVLSA-------MK 350 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV------------------------- 417 + + ++ + G MS R G + L+ +DEV Sbjct: 351 LPWADRLKHVKFGKIKGMSTRKGTAVFLQDFLDEVKAVMKEKQMQSPTTKVNLDYDDPST 410 Query: 418 ---GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 G +V L K + +FD+ K E + + +QYA+ R S+ + Sbjct: 411 EILGVSAVIINDLKHKRHQDYEFDWNKALEMKGDTGI-TLQYAHCRLVSLEENSGATIAS 469 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 IP T+E L+ + ++ + + EPY L YL+ L Sbjct: 470 --------ECIPSLLTEPTAE-DLLYIIGKFDEAVIKSYQELEPYTLVHYLFQL------ 514 Query: 535 HWSHGRENP-RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 SH ++ ++ +L RL L+++ I+ G+ ++G++ N+M Sbjct: 515 --SHATSKALKVLRIKGEPTELANQRLLLMNSARKILAQGMKLLGLKPLNKM 564 Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 30/57 (52%) Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 ++F S N P HVGH R ++G+ +A++ + V R Y+ D G Q + L + Sbjct: 116 VDFSSPNIAKPFHVGHLRSTMIGNYIANINNYFKNNVKRINYLGDWGTQFGFVQLGL 172 >gi|290957374|ref|YP_003488556.1| arginyl tRNA synthetase [Streptomyces scabiei 87.22] gi|260646900|emb|CBG69997.1| putative arginyl tRNA synthetase [Streptomyces scabiei 87.22] Length = 398 Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 4/76 (5%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 R V+ P G +TN A+ L+RP G PL +AE++ + V +V I G GF+N Sbjct: 30 RAVVTPPGPGGSGDYATNIALQLARPAGRPPLQVAEILRPHLSSTEGVAAVEITGPGFLN 89 Query: 91 LYL----SPSYLRKIL 102 ++L + + +R+IL Sbjct: 90 IHLDRAATTTLVRRIL 105 Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 34/183 (18%) Query: 417 VGSDSVRFMMLW-------RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 +G D++R+ +L R ++LL Q NP+F V+YA+AR R++ R A Sbjct: 230 LGPDALRWALLHPAAHDRPRITADLL--------AQRAGNPLFRVRYAHARVRALTRNAA 281 Query: 470 DI-FPDLDFDL----FPRNVIPQESEFDT-SELQLIVHLAEYPRVIENATIAQEPYKLAF 523 + F L P P ++ + L+ L YP + A + P +LA Sbjct: 282 ALGFTAAPGPLGALCGPAEPYPSATQLTADPSIPLVTALTTYPSTLTRAATLRAPDRLAR 341 Query: 524 YLYDLASVF----HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 ++ LA H G E P RL L A +++ GL+++G+ Sbjct: 342 HMVVLADALLAFQHTVLPRGDEKP---------SAAHRARLALAEATGTVLAGGLSLLGI 392 Query: 580 ESP 582 ++P Sbjct: 393 DAP 395 >gi|255029353|ref|ZP_05301304.1| arginyl-tRNA synthetase [Listeria monocytogenes LO28] Length = 76 Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 6/82 (7%) Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 E+ V+ A + P+++ YL DLAS FH ++ + + +N ++T RL L+ Sbjct: 1 EFADVVAEAAAKRAPHRIVRYLNDLASAFHRFYNSN------KVLDMDNLEVTKARLALI 54 Query: 564 HAVASIINSGLNIIGVESPNEM 585 + +GL ++GV +P +M Sbjct: 55 KTAQITLRNGLTLLGVSAPEKM 76 >gi|29829462|ref|NP_824096.1| arginyl-tRNA synthetase [Streptomyces avermitilis MA-4680] gi|29606570|dbj|BAC70631.1| putative arginyl-tRNA synthetase [Streptomyces avermitilis MA-4680] Length = 352 Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust. Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 29/191 (15%) Query: 403 RAGDFITLRHVVDE-----VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457 RAG+ +TLR V +G+D+ R+ +L + + Q + NP+F ++YA Sbjct: 179 RAGEAVTLRPVPAPEDPAPLGADAARWALLHPAAHDRPRITADHLA-QRESNPLFRIRYA 237 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV-HLAEYPRVIENATIAQ 516 +AR R++ R A L F P +V D +++V LA YP + A Sbjct: 238 HARARALTRCAA----RLGFHGEPGDV-----PVDVPGAEVLVRELAGYPHALSAAAAQH 288 Query: 517 EPYKLAFYLYDLASVF----HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572 P +LA +L A F H G E P +++ Sbjct: 289 APDRLARHLVATADAFLAFQHTVLPLGDEKPSAAHRARLALAEAA---------GTVLAG 339 Query: 573 GLNIIGVESPN 583 GL+++G+ +P+ Sbjct: 340 GLSLLGISAPD 350 Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 3/85 (3%) Query: 12 KNYLKEIDCKI---KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68 + L+ + C + ++ + R V+ P G +TN A+ L+RP G P +AE++ Sbjct: 8 RTVLRAVRCAVDEGELSVAVPVRAVVTPPGPGGCGDYATNIALQLARPAGRPPRQVAEIL 67 Query: 69 VARIKIDPDVDSVFIAGKGFINLYL 93 + V V I G GF+N++L Sbjct: 68 RPHLSRTAGVAGVEITGPGFLNIHL 92 >gi|225563350|gb|EEH11629.1| arginyl-tRNA synthetase [Ajellomyces capsulatus G186AR] Length = 636 Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 14/161 (8%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTI---AELIVARIKIDPDVDSVFIAGKGFIN 90 I+R + AHG + A + + + +D + + +L + P VFI F N Sbjct: 61 IQRTQVLAHGDVVLVVARLRLKGVNIDQVAVDLSNKLCTISLISSPVPKGVFIPI--FFN 118 Query: 91 LYLSP----SYL---RKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143 P SY+ R++ ++G++ +N KV +EF S N H GH R Sbjct: 119 ETSLPRLILSYIFDRRQLYGHGNLAGLKNPKNEAAGRKKVIVEFSSPNIAKEFHAGHQRS 178 Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 ++G +++L G++V + Y+ D G Q LA V W+ Sbjct: 179 TIIGAYISNLYKSMGWDVLKINYLGDWGKQFGLLA--VGWQ 217 >gi|290559071|gb|EFD92444.1| arginyl-tRNA synthetase [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 484 Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust. Identities = 75/322 (23%), Positives = 132/322 (40%), Gaps = 50/322 (15%) Query: 58 GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN-- 115 G P AE + RI + + SV A G+IN+ + S L +G G N Sbjct: 38 GKKPKEFAEDLSKRISSEY-IKSVE-AMNGYINISMDFSSLN------THTGFLNGENDN 89 Query: 116 ---LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172 I G + +E S NP +H+GH R + +G+ + +S V +I D GA Sbjct: 90 STENIFSGKNIRLEHTSVNPNKGLHIGHMRNSYIGEFMRRCFLYSSSNVITSNFIEDTGA 149 Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGK------ELADKYSSELLNF-- 224 Q+ + + + ++ D+D+ Y K V + L +K LL+ Sbjct: 150 QVADIIVGFKYLGKKI----DTDIKFDLYCSKIYKEVNQLYESDSTLLEKRRKVLLDIEN 205 Query: 225 PEEKWLPIVKDYSVQAMMKIIRDDLKALN---IQHDIFISEDDFHRGDPSPIRDIIDNLA 281 E+ L I++ + + K++ L L+ I++D+ D R + Sbjct: 206 KNEETLEILE----KIVDKVLSAQLVTLSGERIKYDLL----DLER-----------YIL 246 Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341 +G V + + + K + D+ + + + G +V L +SDG+ Y A DLAY Sbjct: 247 GEGIVKKALDKLLEEKIAFISESDKNKGCIVTLIDGKEV--TLTRSDGTALYIAKDLAYA 304 Query: 342 KCKYERGFDNMIYV-MGSDHSG 362 K+ +N+ Y G ++ G Sbjct: 305 MIKHGILHENIKYKPFGQNYDG 326 >gi|325093305|gb|EGC46615.1| arginyl-tRNA synthetase [Ajellomyces capsulatus H88] Length = 642 Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%) Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166 ++G++ +N KV +EF S N H GH R ++G +++L G++V + Y Sbjct: 88 LAGLKNPKNEAAGRKKVIVEFSSPNIAKEFHAGHLRSTIIGAYISNLYKSMGWDVLKINY 147 Query: 167 INDAGAQINTLALSVFWR 184 + D G Q LA V W+ Sbjct: 148 LGDWGKQFGLLA--VGWQ 163 >gi|76155576|gb|AAX26868.2| SJCHGC06108 protein [Schistosoma japonicum] Length = 242 Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust. Identities = 43/145 (29%), Positives = 58/145 (40%), Gaps = 18/145 (12%) Query: 447 KENPVFYVQYAYARCRSIFRQA--KDIFPDLDFDLFPRNVIPQESEFDT-SELQLIVHLA 503 K N Y+ YAY R RSI R A D + D P N FD E L L Sbjct: 110 KGNTAVYLLYAYTRIRSIIRNAGYSDKSINEIIDTLPLN-------FDHPMEFTLAKALC 162 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG---RENPRLRFVQANNRKLTMMRL 560 P ++ + L YLYDL+ VF + N VQ N R+ Sbjct: 163 RLPDILLKIQNDFLLHSLCDYLYDLSCVFTNFYDTCYCIERNQETGDVQINKE-----RI 217 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 L A A ++ G +I+G+E+ +M Sbjct: 218 LLCEATARVMKCGFDILGIETVEKM 242 >gi|295666582|ref|XP_002793841.1| arginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01] gi|226277494|gb|EEH33060.1| arginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01] Length = 618 Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%) Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167 +G+ +N KV +EF S N H GH R ++G +++L G++V + Y+ Sbjct: 143 TGLRDAKNEAAGRKKVIVEFSSPNIAQEFHAGHLRSTIIGAHISNLYGSMGWDVLKINYL 202 Query: 168 NDAGAQINTLALSVFWR 184 D G Q LA V W+ Sbjct: 203 GDWGKQFGLLA--VGWQ 217 >gi|326567640|gb|EGE17748.1| arginyl-tRNA synthetase [Moraxella catarrhalis 12P80B1] Length = 127 Score = 45.4 bits (106), Expect = 0.029, Method: Composition-based stats. Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 16/137 (11%) Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 N Y+QYAY R RSIF +A LD ++ E + E L V L ++ V Sbjct: 7 NTAPYMQYAYTRIRSIFARA-----GLDMADIGGEIVIHEDK----ERALAVKLLQFEEV 57 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 + P+ L YL++LA +F + P L +++ K RL+L A Sbjct: 58 LLLVAKDGMPHLLCQYLFELAGIFSSFY---EACPIL----SSDDKTKTSRLRLAALTAK 110 Query: 569 IINSGLNIIGVESPNEM 585 + GL ++G+++ +M Sbjct: 111 TLKQGLQLLGIKTVEKM 127 >gi|196005211|ref|XP_002112472.1| hypothetical protein TRIADDRAFT_56525 [Trichoplax adhaerens] gi|190584513|gb|EDV24582.1| hypothetical protein TRIADDRAFT_56525 [Trichoplax adhaerens] Length = 519 Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 3/70 (4%) Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +++ S N P HVGH R +G+ +A++ + G +VTR Y+ D G Q L + F + Sbjct: 126 VDYSSPNIAKPFHVGHLRSTFIGNFIANINEYFGNKVTRINYLGDWGVQFGLLGVG-FQK 184 Query: 185 Y--QQALYNN 192 + ++L NN Sbjct: 185 FGSTESLINN 194 >gi|213610152|ref|ZP_03369978.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 76 Score = 45.1 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK--VNIEFVSANPTGPMHVGHCRCA 144 GFIN++L P++L + + + S R + + T+ + +++ + N MHVGH R Sbjct: 2 GFINIFLEPAFLAEQVQQALTSD----RLGVSQPTRQTIVVDYSAPNVAKEMHVGHLRST 57 Query: 145 VVGDTLASLMAFSGYEVTR 163 ++GD + F G+ V R Sbjct: 58 IIGDAAVRTLEFLGHHVIR 76 >gi|326429873|gb|EGD75443.1| arginyl-tRNA synthetase [Salpingoeca sp. ATCC 50818] Length = 751 Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 1/80 (1%) Query: 106 VVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREY 165 V G R+ G V +E+ S N P H GH R ++G+ LA++ A +G V R Sbjct: 206 VTQGSNLDRDQGGGAPVVVVEYSSPNIAKPFHAGHLRSTIIGNVLANMYAAAGARVVRAN 265 Query: 166 YINDAGAQINTLALSVFWRY 185 Y+ D G QI +AL F RY Sbjct: 266 YLGDWGRQIGLVALG-FERY 284 Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust. Identities = 70/296 (23%), Positives = 114/296 (38%), Gaps = 58/296 (19%) Query: 324 LLKSDGSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRL----------EAVAA 372 L KSDG+ TY + DL +++ FD +YV+ + + + K+L + VA+ Sbjct: 480 LEKSDGTTTYMSRDLGAILDRHDALRFDKHLYVVAYEQALHFKQLLVLLSSVPGGQGVAS 539 Query: 373 -----------AVSEKKAQINVLLCE----------LVRLYRDGMPIKMSKRAGDFITLR 411 +S +K NV+L E L RL +D + S GD T Sbjct: 540 RCEHISYGLVTGLSTRKG--NVILLEEILDAAKEQMLQRLQQDSSRVAGS---GDDPTAE 594 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 V D + S+ L K + F + ++ + + F +QY + R SI R + Sbjct: 595 AVADMLALSSLVVQDLRSKRVKNYQFSWQRMLDAHGDTGTF-LQYTHVRLASIQR-VNPV 652 Query: 472 FPDLDFDLFPRNVIPQESEFDTS-ELQLIVH-LAEYPRVIENATIAQEPYKLAFYLYDLA 529 P D + TS Q ++H LA+ ++ A A EP L YL L+ Sbjct: 653 SPCTD----------AVDDISTSPHSQAVLHLLAQKQDILAAAVRANEPAVLVQYLLQLS 702 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H R V+ + R+ L A + GL ++G+ + M Sbjct: 703 RAVSSALPHVR-------VKGAPEMVARERMALFTAARHTLAQGLELLGLAPLDRM 751 >gi|312069872|ref|XP_003137884.1| hypothetical protein LOAG_02298 [Loa loa] gi|307766950|gb|EFO26184.1| hypothetical protein LOAG_02298 [Loa loa] Length = 500 Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust. Identities = 107/520 (20%), Positives = 202/520 (38%), Gaps = 95/520 (18%) Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173 + L+ + I++ S N HVG+ R V+G + ++ +G +V YI D G Q Sbjct: 28 QKLVKNKKSIVIDYSSPNIAKQFHVGNFRSTVIGRYIDTINRAAGNKVMSINYIGDWGLQ 87 Query: 174 INTLAL-----------SVFWRYQQALY---------NNDSDLPEGYYPGVY--LKHVGK 211 +A W Q L N ++ + + L + Sbjct: 88 FALIAAYWPMMKPSQEEWSAWNTMQRLTLLAKCYVEANKSAERSNSFLQRAHDILASMEN 147 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 L +SE L+F + + S + + + R +N+ D+ E DF Sbjct: 148 SLLTAGTSEHLSFWQS-----ARQLSHEQLHRFYR----RINLSMDVEYFESDF----VV 194 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKC-DMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 +ID + R+G G + +C ++D+ ++ R + R L + Sbjct: 195 SAHQLIDRMLREGQAENG----GNGAISVRCKELDKPIIIRRPNNTTLYLSRDLASALLR 250 Query: 331 YTYFAADLAYFKCKY--ERGFDNMIYV---MGSDHSG------YVKRLEAVAAAVSEKKA 379 +AAD + + + F+N+ Y+ MG + G R++ ++ + E Sbjct: 251 EQLYAADEYLYVVDHAQRQHFNNLKYLLNAMGRNDIGDKIQHVSFGRVKGLSTRLGE--- 307 Query: 380 QINVLLCELV-RLYRDGMPIKMSKRAGDFITLRHVV----DEVGSDSVRFMM-------L 427 ELV ++ G+ + A FIT + DE+ + + L Sbjct: 308 ------VELVSKILDHGLEL-----AKSFITKSKTMKIGQDEISQVAANLSLGTMIIDDL 356 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487 R S F F K + ++ N + +Q ++R SI + + DL + F Sbjct: 357 KRARSTDYSFSFDKAFQMNQNNALL-LQTKHSRLMSIEERNHTLKQDL-MERF------- 407 Query: 488 ESEFDTSE--LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 E +F+T+E +L+ +P V+ + EP +L YL LA++ G + L Sbjct: 408 EGDFETNEASWRLLKQFKAFPDVLYASYQEMEPCRLTVYLLQLANIV------GFASCIL 461 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R + + ++ + RL L+ I+NSG+ ++G+E +M Sbjct: 462 R-ISSEPIEVAIPRLLLLSTARKILNSGMRLLGMEPLKKM 500 >gi|124805963|ref|XP_001350588.1| arginyl-tRNA synthetase, putative [Plasmodium falciparum 3D7] gi|23496712|gb|AAN36268.1|AE014846_67 arginyl-tRNA synthetase, putative [Plasmodium falciparum 3D7] Length = 590 Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust. Identities = 36/151 (23%), Positives = 60/151 (39%), Gaps = 29/151 (19%) Query: 43 GHLSTNAAMILSRPLGLD-----PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSY 97 GH N A+ + + G + I+E I++ I + + + + +GFI + LS Y Sbjct: 40 GHYQCNNAINIYKKYGKELNYENAQKISEFIISNIN-ETIFEEIKSSPQGFITVKLSKDY 98 Query: 98 LRKILSSIV---------------VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 + L + S YG L+ +F S N MHVGH R Sbjct: 99 IETSLKKLFNGEKIDISININDIKESNENYGNVLV--------DFSSPNIAKEMHVGHLR 150 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173 ++GD++ + F R ++ D G Q Sbjct: 151 STIIGDSICRVFEFLKINTHRVNHVGDWGTQ 181 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 12/106 (11%) Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 K N Y+ Y Y+R SIFR++ D+ D I E+ L +H+ ++P Sbjct: 469 KGNTGIYIIYGYSRICSIFRKSTINVEDISKDELSLTSIY--------EINLGLHILKFP 520 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR----ENPRLRFV 548 + +KLA Y+YDL + F + + + EN + R + Sbjct: 521 DIFYYILKNMLVHKLAEYMYDLTTTFTAFYENCKVLNNENEKSRLL 566 >gi|327305635|ref|XP_003237509.1| arginyl-tRNA synthetase [Trichophyton rubrum CBS 118892] gi|326460507|gb|EGD85960.1| arginyl-tRNA synthetase [Trichophyton rubrum CBS 118892] Length = 576 Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust. Identities = 67/289 (23%), Positives = 113/289 (39%), Gaps = 72/289 (24%) Query: 329 GSYTYFAADLAYFKCKYER-GFDNMIYVMGSDHSGYVKRL----EAVA-AAVSEKKAQIN 382 G+ TY D+A + E+ FD MIYV+ ++ Y +RL E ++ V+ K +N Sbjct: 299 GTTTYLLRDIAAALERVEKYQFDKMIYVVSTEQDLYFQRLFKTIELMSYTDVAAKLEHVN 358 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN----------S 432 G + MS R L ++DE GS M RKN + Sbjct: 359 F-----------GKVMGMSSRLSTVKILSDILDECGSAMHDVM---RKNPTKYEQIENPT 404 Query: 433 ELLD---------------------FDFCKVKE-QSKENPVFYVQYAYARCRSIFRQAKD 470 E+ D FD K+ + P Y+QYA+AR SI R+ Sbjct: 405 EVSDTLGITAVMVQDMTGKRIHNYTFDIAKMTSFEGDTGP--YLQYAHARLCSIVRKV-- 460 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE-YPRVIENATIAQEPYKLAFYLYDLA 529 D+ P+ + + F + Q +++ +V NA EP + YL+ LA Sbjct: 461 -------DIDPKEI--TNANFSLLKEQHAINILRLMAQVTSNAVKTLEPTTILTYLFRLA 511 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 + ++ + A + +T+ RL L ++ +G+ ++G Sbjct: 512 HQISSGYD------VIKVIGAESHDVTVARLALYEGARQVLKNGMRLLG 554 >gi|226287045|gb|EEH42558.1| arginyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18] Length = 584 Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (2%) Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169 IE +N KV +EF S N H GH R ++G +++L G++V + Y+ D Sbjct: 95 IEDAKNEAAGRKKVIVEFSSPNIAKEFHAGHLRSTIIGAYISNLYGNMGWDVLKINYLGD 154 Query: 170 AGAQINTLALSVFWR 184 G Q LA V W+ Sbjct: 155 WGKQFGLLA--VGWQ 167 >gi|297520008|ref|ZP_06938394.1| arginyl-tRNA synthetase [Escherichia coli OP50] Length = 95 Score = 44.7 bits (104), Expect = 0.047, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 6/91 (6%) Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554 E QL L ++ + P+ + YLYDLA +F G + H + A N + Sbjct: 11 EAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEH------CPILSAENEE 64 Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL+L A + GL+ +G+E+ M Sbjct: 65 VRNSRLKLAQLTAKTLKLGLDTLGIETVERM 95 >gi|154281943|ref|XP_001541784.1| arginyl-tRNA synthetase [Ajellomyces capsulatus NAm1] gi|150411963|gb|EDN07351.1| arginyl-tRNA synthetase [Ajellomyces capsulatus NAm1] Length = 596 Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%) Query: 107 VSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYY 166 ++G++ +N KV +EF S N H GH R ++G +++L G++V + Y Sbjct: 102 LAGLKNPKNEAAGRKKVIVEFSSPNIAKEFHAGHLRSTIIGAYISNLYKSMGWDVLKINY 161 Query: 167 INDAGAQINTLALSVFWR 184 + D G Q LA V W+ Sbjct: 162 LGDWGKQFGLLA--VGWQ 177 >gi|46107744|ref|XP_380931.1| hypothetical protein FG00755.1 [Gibberella zeae PH-1] Length = 1337 Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 13/107 (12%) Query: 89 INLYLSPSYLRKI-LSSIVVSGIEYGRNLI----------GKGTKVNIEFVSANPTGPMH 137 + ++ SP+ L ++ L I + YG + G+ KV +E+ S N Sbjct: 817 LQVFFSPNTLSRLSLFYISDRNVSYGYDTSLGLTDPAVPDGQKKKVIVEYSSPNMASEFQ 876 Query: 138 VGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 V H R ++G +A++ A G +V R Y+ D G QI LA WR Sbjct: 877 VSHLRSTLLGTYVANIHASMGCDVVRMNYLGDWGKQIGLLAAG--WR 921 >gi|213584201|ref|ZP_03366027.1| arginyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 109 Score = 44.3 bits (103), Expect = 0.060, Method: Composition-based stats. Identities = 35/117 (29%), Positives = 49/117 (41%), Gaps = 19/117 (16%) Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFD-LFPRNVIPQESEFDTSELQLIVHLAEYPR 507 N Y+QYAY R S+FR+A D+D L VI E E QL L ++ Sbjct: 1 NTAPYMQYAYTRVLSVFRKA-----DIDEQALASAPVIISEDR----EAQLAARLLQFEE 51 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSH---------GRENPRLRFVQANNRKL 555 + P+ + YLYD+A +F G + H N RL+ Q + L Sbjct: 52 TLTVVAREGTPHVMCAYLYDVAGLFSGFYEHCPILSAENDAVRNSRLKLAQLTAKTL 108 >gi|328873579|gb|EGG21946.1| arginyl-tRNA synthetase [Dictyostelium fasciculatum] Length = 730 Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 11/135 (8%) Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP-QESEFDTSELQLIVHLAEY 505 K N Y+ Y+ R +I R+AK D + N+ Q EF +E +L+V ++++ Sbjct: 601 KGNTSIYLNYSLTRIATIMRRAK-TERGFDIEEAELNIASFQFQEFTENERRLVVMISKF 659 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 +++A P + YL+D+A FH + V ++R+ RL + + Sbjct: 660 ADTLKSAEGQLRPAIICDYLWDVADTFHRFYETDT-------VLGSDRQ--HQRLLICNT 710 Query: 566 VASIINSGLNIIGVE 580 V I+ +G ++GVE Sbjct: 711 VKKILETGFYLLGVE 725 Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust. Identities = 16/51 (31%), Positives = 31/51 (60%) Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172 +V ++F S N + +HVGH R +G+++ ++ + G+EV R ++ D G Sbjct: 208 RVLVDFASPNMSKELHVGHLRSIALGESVCRILEYRGHEVERISHVGDFGT 258 >gi|329939818|ref|ZP_08289119.1| arginyl tRNA synthetase [Streptomyces griseoaurantiacus M045] gi|329301388|gb|EGG45283.1| arginyl tRNA synthetase [Streptomyces griseoaurantiacus M045] Length = 317 Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 10/132 (7%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 R V+ P G +TN A+ L+R G P +AE++ AR+ V V ++G GF+N Sbjct: 21 RAVVTPPGPGGSGDYATNIALRLAREAGRPPRDVAEILRARLCRADGVADVLVSGPGFLN 80 Query: 91 LYLSPSYLRKIL-SSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 ++L+ L I G+ YG + G + + V P V R VV D+ Sbjct: 81 VHLADDLATSALVRRIRADGVRYGYSEECAGDEPVLLRV------PFDV---RAEVVADS 131 Query: 150 LASLMAFSGYEV 161 L ++A G V Sbjct: 132 LVRIIASQGGRV 143 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 32/143 (22%), Positives = 61/143 (42%), Gaps = 25/143 (17%) Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQ-LIVHLA 503 Q + NP+F V+YA+AR ++ R + +++P+ + ++ + L+ LA Sbjct: 192 QRESNPLFRVRYAHARTCALARAGARL-----------HLVPEPGDTAQTDARPLLRALA 240 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVF----HGHWSHGRENPRLRFVQANNRKLTMMR 559 EYP + +A + P +LA +L A F H G E P Sbjct: 241 EYPHALAHAARHRAPDRLARHLVGTADAFLAVQHTVLPLGDEKPSAAHRARLALAEAA-- 298 Query: 560 LQLVHAVASIINSGLNIIGVESP 582 +++ GL+++G+ +P Sbjct: 299 -------GTVLAGGLSLLGISAP 314 >gi|315605246|ref|ZP_07880292.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310] gi|315313063|gb|EFU61134.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310] Length = 486 Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 35/79 (44%) Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 KV I A G HVGH R AV DTL + SGYEVT + D +I T + Sbjct: 25 KVGIYLCGATVQGSPHVGHLRAAVSFDTLIRWLRRSGYEVTYVRNVTDIDDKILTKSAES 84 Query: 182 FWRYQQALYNNDSDLPEGY 200 W + Y + + + Y Sbjct: 85 GWDWWAWAYRFEREFTQAY 103 >gi|17532153|ref|NP_495227.1| aRginyl aa-tRNA syntheTase family member (rrt-2) [Caenorhabditis elegans] gi|15617714|gb|AAL02449.1|U23169_1 Arginyl aa-trna synthetase protein 2 [Caenorhabditis elegans] Length = 512 Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 5/94 (5%) Query: 108 SGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYI 167 S +E +GK ++ ++F S N HVG+ R ++G + + G EVT Y+ Sbjct: 21 SIVEQKYRTVGKSQRIVVDFSSPNIAKQFHVGNLRSTLIGRYVDKVSRVMGNEVTSVNYL 80 Query: 168 NDAGAQINTLALSVFW---RYQQALYNNDSDLPE 198 D G Q +A FW R +N+ SD+ + Sbjct: 81 GDWGTQFAMIA--AFWPQMRPSDQYWNSLSDVEK 112 >gi|317503327|ref|ZP_07961375.1| isoleucine--tRNA ligase [Prevotella salivae DSM 15606] gi|315665550|gb|EFV05169.1| isoleucine--tRNA ligase [Prevotella salivae DSM 15606] Length = 1211 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 64/156 (41%), Gaps = 28/156 (17%) Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340 A+Q Y +EG L P K T K ++ ++ L ST G V Y+ AD Sbjct: 675 AQQHYPFEGELAPEALKATGKSEVGYRRELVTSTYEGIPV---------PPAYYPADFI- 724 Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400 G D G+ L A++ V + A NV+ LV D KM Sbjct: 725 -----NEGVDQT--------RGWFFTLHAISTMVFDHVAFKNVISTGLVL---DAKGNKM 768 Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 SK G+ ++D+ G+D VRF M+ NSE D Sbjct: 769 SKHVGNVTNPFEMIDKYGADPVRFYMM--TNSEPWD 802 >gi|225389884|ref|ZP_03759608.1| hypothetical protein CLOSTASPAR_03633 [Clostridium asparagiforme DSM 15981] gi|225044077|gb|EEG54323.1| hypothetical protein CLOSTASPAR_03633 [Clostridium asparagiforme DSM 15981] Length = 248 Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust. Identities = 26/133 (19%), Positives = 62/133 (46%), Gaps = 9/133 (6%) Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 Y+ Y R +SI + ++ +D + ++P E +E L++ L Y V+EN+ Sbjct: 125 YILYTIVRIKSILNKYREDGGQVDETAETKVILPPAGE---TEKALMLLLTRYSEVLENS 181 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572 P+K+ Y+++LA+ F+ + + + + + L+ ++ + Sbjct: 182 FAETAPHKICQYVFELANAFNSFYHE------TKILSEGDEARKDSYIGLITLARRVLEA 235 Query: 573 GLNIIGVESPNEM 585 ++++G E+P+ M Sbjct: 236 CIDVLGFEAPDRM 248 >gi|149002906|ref|ZP_01827817.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69] gi|147758909|gb|EDK65904.1| arginyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69] Length = 167 Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 5/94 (5%) Query: 83 IAGKGFINLYLSPSYLR-KILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 +A ++N +L S + ++L ++ Y IGK V I+ S N P +GH Sbjct: 73 VATGPYVNFFLDKSAISAQVLQAVTTEKEHYADQNIGKQENVVIDMSSPNIAKPFSIGHL 132 Query: 142 RCAVVGDTLASLMAFSGYEVTR----EYYINDAG 171 R V+GD+L+ + S + +R E +N+ G Sbjct: 133 RSTVIGDSLSHIFQKSVIKRSRSTIWETGVNNLG 166 >gi|88811586|ref|ZP_01126840.1| arginyl-tRNA synthetase [Nitrococcus mobilis Nb-231] gi|88790977|gb|EAR22090.1| arginyl-tRNA synthetase [Nitrococcus mobilis Nb-231] Length = 681 Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 1/91 (1%) Query: 83 IAGKG-FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 I KG +INL LS +L ++ G +G N +++ S N +H GH Sbjct: 115 IETKGMYINLTLSDRWLLDSAQAVAEFGDAFGGNDSHSERTFVVDYSSPNVAKVLHAGHI 174 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGA 172 R ++G L++L G V R +IND G Sbjct: 175 RSTIIGHVLSNLYEACGALVYRVNHINDFGG 205 >gi|318075516|ref|ZP_07982848.1| arginyl tRNA synthetase [Streptomyces sp. SA3_actF] Length = 314 Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 7/104 (6%) Query: 17 EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP 76 E+D V +L R+ + PR G + N A++ + PL +A L+ R++ DP Sbjct: 22 EVD---SVAADVLARVTVGVPRPGGDGDYACNVALVAAGAARTSPLALAALLRERLRHDP 78 Query: 77 DVDSVFIAGKGFINLYLS-P-SYLRKILSSIVVSGIEYGRNLIG 118 + V + G GF+N L+ P +Y R +++ + YG L G Sbjct: 79 RLADVRVTGPGFLNFALADPGTYERDLVAETLAP--RYGDALAG 120 >gi|332970459|gb|EGK09451.1| ketol-acid reductoisomerase [Kingella kingae ATCC 23330] Length = 337 Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 16/120 (13%) Query: 334 FAADLAYFKC----------KYERGFDNMIYVMG--SDHSGYVKRLEAVAAAVSE--KKA 379 +A ++AYF+C YE G NM Y + +++ YV +E + A E KKA Sbjct: 217 YAPEMAYFECLHELKLIVDLMYEGGIANMNYSISNNAEYGEYVTGVEVITPATKEAMKKA 276 Query: 380 QINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438 + E +++ ++G S A +T H +++VG+ +R MM W ++L+D D Sbjct: 277 LYRIQSGEYAKMFIQEGATNYASMTARRRLTADHQIEKVGA-QLRSMMPWIAKNKLVDQD 335 >gi|224983700|pdb|3GDZ|A Chain A, Crystal Structure Of Arginyl-Trna Synthetase From Klebsiella Pneumoniae Subsp. Pneumoniae gi|224983701|pdb|3GDZ|B Chain B, Crystal Structure Of Arginyl-Trna Synthetase From Klebsiella Pneumoniae Subsp. Pneumoniae gi|224983702|pdb|3GDZ|C Chain C, Crystal Structure Of Arginyl-Trna Synthetase From Klebsiella Pneumoniae Subsp. Pneumoniae gi|224983703|pdb|3GDZ|D Chain D, Crystal Structure Of Arginyl-Trna Synthetase From Klebsiella Pneumoniae Subsp. Pneumoniae Length = 109 Score = 42.4 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 33/56 (58%) Query: 43 GHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98 G N +++ LG P +AE +++ + ++ + V IAG GFIN++L P++L Sbjct: 40 GDYQANGVXAVAKKLGXAPRQLAEQVLSHLDLNGIANKVEIAGPGFINIFLDPAFL 95 >gi|320095413|ref|ZP_08027091.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338] gi|319977656|gb|EFW09321.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338] Length = 437 Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 34/79 (43%) Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 +V I A G HVGH R AV DTL + SGYEVT + D +I T + Sbjct: 21 EVGIYLCGATVQGSPHVGHLRAAVSFDTLIRWLRRSGYEVTYVRNVTDIDDKILTKSAQA 80 Query: 182 FWRYQQALYNNDSDLPEGY 200 W + Y + + Y Sbjct: 81 GWDWWAWAYRYEREFTSAY 99 >gi|83770024|dbj|BAE60159.1| unnamed protein product [Aspergillus oryzae] Length = 538 Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 13/95 (13%) Query: 97 YLRKILSSIVVSGIEYG----------RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 Y IL I+ +G YG N ++ IEF S N P GH R ++ Sbjct: 14 YENAILPLILQNGNNYGSDHRLGLREPNNPDAGRKRIIIEFGSPNIAKPFRAGHLRSTIL 73 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 G LA+L + ++VTR Y+ D G N L + V Sbjct: 74 GGFLANLYEEADWDVTRMNYLGDRG---NVLGVGV 105 >gi|76154141|gb|AAX25642.2| SJCHGC06796 protein [Schistosoma japonicum] Length = 156 Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust. Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%) Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 I++ S N P H+GH R AV G+ + ++ G++V YI D G Q + LA S F + Sbjct: 36 IDYSSPNIAKPFHLGHFRAAVTGNFVKNINEAFGHKVIGINYIGDWGTQFDILA-SGFSK 94 Query: 185 Y 185 Y Sbjct: 95 Y 95 >gi|110736575|dbj|BAF00253.1| arginyl-tRNA synthetase [Arabidopsis thaliana] Length = 272 Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 69/171 (40%), Gaps = 19/171 (11%) Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE-QSKENPVFYVQYAYARCRSIFRQA 468 L + VG +V++ L KN+ L ++ F + K N Y+ YA+AR SI R++ Sbjct: 114 LDQTAEAVGYGAVKYADL--KNNRLTNYTFSFDQMLNDKGNTAVYLLYAHARICSIIRKS 171 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 D D + D L L HL + +E A P L YLY+L Sbjct: 172 GK-----DIDELKKTGKLALDHADERALGL--HLLRFAETVEEACTNLLPSVLCEYLYNL 224 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 + F +S+ Q N RL L A A ++ +++G+ Sbjct: 225 SEHFTRFYSN---------CQVNGSPEETSRLLLCEATAIVMRKCFHLLGI 266 >gi|220932295|ref|YP_002509203.1| valyl-tRNA synthetase [Halothermothrix orenii H 168] gi|219993605|gb|ACL70208.1| valyl-tRNA synthetase [Halothermothrix orenii H 168] Length = 882 Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust. Identities = 53/198 (26%), Positives = 78/198 (39%), Gaps = 35/198 (17%) Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L RD + KMSK G+ I VV++ G+D++RFM++ N+ D F +E+ E Sbjct: 517 LIRDALGRKMSKSLGNGIDPLEVVEKYGADALRFMLI-TGNTPGNDMRF---REERLEAS 572 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH----LAEYP 506 + + R I D+ P SE D ++L+L + L+ Sbjct: 573 RNFANKIWNAARFILMNTDDLDP---------------SEIDENDLKLTLADKWMLSRLQ 617 Query: 507 RVIENATIAQEPY---KLAFYLYDLASVFHGHWSHGRENPRL---------RFVQANNRK 554 +VIE A E Y + A LYD W PRL R Q K Sbjct: 618 KVIEEVDKAFEKYYFGEAAKVLYDFIWSEFCDWYIELIKPRLYQDKDVMEKRTAQYTGLK 677 Query: 555 LTMMRLQLVHAVASIINS 572 + L+L+H V I Sbjct: 678 VLEKILRLLHPVMPFITE 695 >gi|154508503|ref|ZP_02044145.1| hypothetical protein ACTODO_01004 [Actinomyces odontolyticus ATCC 17982] gi|153798137|gb|EDN80557.1| hypothetical protein ACTODO_01004 [Actinomyces odontolyticus ATCC 17982] Length = 485 Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 34/79 (43%) Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 KV I A G HVGH R AV DTL + SGYEVT + D +I + Sbjct: 22 KVGIYLCGATVQGSPHVGHLRAAVSFDTLIRWLRRSGYEVTYVRNVTDIDDKILHKSAEA 81 Query: 182 FWRYQQALYNNDSDLPEGY 200 W + Y + + + Y Sbjct: 82 GWDWWAWAYRFEREFTQAY 100 >gi|300727136|ref|ZP_07060555.1| isoleucine--tRNA ligase [Prevotella bryantii B14] gi|299775680|gb|EFI72271.1| isoleucine--tRNA ligase [Prevotella bryantii B14] Length = 1222 Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust. Identities = 44/156 (28%), Positives = 63/156 (40%), Gaps = 28/156 (17%) Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340 A+Q Y +EG + T K + + ++ L ST G V Y+ AD Sbjct: 686 AQQHYPFEGAMNAEALAATGKSEAEYREELVHSTYTGIPVPP---------AYYPADFI- 735 Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400 G D G+ L A++ V ++ A NV+ LV D KM Sbjct: 736 -----NEGVDQT--------RGWFFTLHAISTMVFDQVAFKNVISSGLVL---DAKGNKM 779 Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 SK G+ ++D+ G+D VRF ML NSE D Sbjct: 780 SKHVGNVTNPFEMIDKYGADPVRFYML--TNSEPWD 813 >gi|293194132|ref|ZP_06609933.1| cysteine--tRNA ligase [Actinomyces odontolyticus F0309] gi|292819774|gb|EFF78785.1| cysteine--tRNA ligase [Actinomyces odontolyticus F0309] Length = 454 Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 34/79 (43%) Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 KV I A G HVGH R AV DTL + SGYEVT + D +I + Sbjct: 22 KVGIYLCGATVQGSPHVGHLRAAVSFDTLIRWLRRSGYEVTYVRNVTDIDDKILHKSAEA 81 Query: 182 FWRYQQALYNNDSDLPEGY 200 W + Y + + + Y Sbjct: 82 GWDWWAWAYRFEREFTQAY 100 >gi|330882951|gb|EGH17100.1| arginyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race 4] Length = 99 Score = 41.6 bits (96), Expect = 0.36, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 21/104 (20%) Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH----GRE 541 PQE E L LA++ + N P+ L YLYDLA +F + + G E Sbjct: 13 PQEQE-------LAARLAQFTETLNNVAEKGTPHVLCAYLYDLAGLFSSFYENCPILGAE 65 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 NP + RL+L + GL+++G+E+ M Sbjct: 66 NPDQQ----------QSRLRLAALTGRTLKQGLDLLGLETLERM 99 >gi|281424358|ref|ZP_06255271.1| isoleucine--tRNA ligase [Prevotella oris F0302] gi|281401627|gb|EFB32458.1| isoleucine--tRNA ligase [Prevotella oris F0302] Length = 1211 Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust. Identities = 45/156 (28%), Positives = 64/156 (41%), Gaps = 28/156 (17%) Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340 A+Q Y +EG + P K T K + + ++ L ST G V Y+ AD Sbjct: 675 AQQHYPFEGEIAPEGLKATGKSEDEYRRELVTSTYEGIPV---------PPAYYPADFI- 724 Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400 G D G+ L A++ V + A NV+ LV D KM Sbjct: 725 -----NEGVDQT--------RGWFFTLHAISTMVFDHVAFKNVISTGLVL---DAKGNKM 768 Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 SK G+ ++D+ G+D VRF M+ NSE D Sbjct: 769 SKHVGNVTNPFEMIDKYGADPVRFYMM--TNSEPWD 802 >gi|326403598|ref|YP_004283680.1| cysteinyl-tRNA synthetase [Acidiphilium multivorum AIU301] gi|325050460|dbj|BAJ80798.1| cysteinyl-tRNA synthetase [Acidiphilium multivorum AIU301] Length = 449 Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 32/55 (58%) Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453 KMSK G+F T++ V+DE ++VRF++L +LDF + E +E FY Sbjct: 268 KMSKSLGNFRTVQDVLDEAPGEAVRFLLLKTHYRGVLDFSTAALAEAKRELDRFY 322 >gi|1572515|gb|AAC44610.1| arginyl tRNA synthetase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] Length = 87 Score = 41.6 bits (96), Expect = 0.40, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 6/91 (6%) Query: 495 ELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRK 554 E QL L ++ + P+ + YLYD+A +F G + H + A N Sbjct: 3 EAQLADRLLQFEETLTVVAREGTPHVMCAYLYDVAGLFSGFYEH------CPILSAENDA 56 Query: 555 LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL+LV A + GL+ G+E+ M Sbjct: 57 VRNSRLKLVQLTAKTLKLGLDTSGIETAERM 87 >gi|187777332|ref|ZP_02993805.1| hypothetical protein CLOSPO_00884 [Clostridium sporogenes ATCC 15579] gi|187774260|gb|EDU38062.1| hypothetical protein CLOSPO_00884 [Clostridium sporogenes ATCC 15579] Length = 645 Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust. Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 23/131 (17%) Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 P+ +H+G+ V DTLA +GY+V ++ G +I LA + Sbjct: 15 PSAKLHIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLAEA----------- 63 Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251 +G P Y+ + + D + +++N +K++ DY V+ + KI K Sbjct: 64 ------KGVTPKAYVDEIVAGIKDLW--KMMNIDYDKFIRTTDDYHVELVQKI----FKT 111 Query: 252 LNIQHDIFISE 262 L + DI+ SE Sbjct: 112 LCDKGDIYKSE 122 >gi|71033807|ref|XP_766545.1| arginyl-tRNA synthetase [Theileria parva strain Muguga] gi|68353502|gb|EAN34262.1| arginyl-tRNA synthetase, putative [Theileria parva] Length = 639 Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust. Identities = 45/197 (22%), Positives = 93/197 (47%), Gaps = 27/197 (13%) Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVV--DEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 ++V+L D M + GD++ L+ V ++G S+ F L + +F ++ Sbjct: 464 QVVKLVTDHMV-----KRGDYLQLKSPVLSRKIGVGSILFSDLSVEPKSGYNFSIERLMN 518 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 Q N + + Y+Y RC+SI ++ + + P+ IP + E +L + L Sbjct: 519 QGY-NLLISILYSYVRCQSILKRCESL---------PQ--IPSNEFRNEYERKLGLVLLG 566 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 + +I + +EP+++ YL +L+ F+ + + P V A++ K+ + L+LV Sbjct: 567 FENIIATSISLREPHRVCKYLTNLSREFNQFY---EKTP----VIADD-KVNSLSLKLVK 618 Query: 565 AVASIINSGLNIIGVES 581 + I GL I+ +++ Sbjct: 619 ITSRAIEIGLGILNIQT 635 Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 16/117 (13%) Query: 117 IGKGT--KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 +GK T V +++ S N +H+GH R +G +++L+ FSG +V R ++ D G Sbjct: 112 VGKLTDETVLVDYFSPNVGKNLHMGHIRSLGIGQAISNLLHFSGSKVIRRNHVGDFG--- 168 Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPG----VYLKHVGKELADKYSSELLNFPEE 227 L + RY + D+ E P V L+ ++L +S LNF + Sbjct: 169 --LHSGIIMRY---IIEYDTRAMEALNPATCDSVRLRETTRQLVAGFSP--LNFSHD 218 >gi|324512866|gb|ADY45313.1| Arginyl-tRNA synthetase [Ascaris suum] Length = 361 Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust. Identities = 37/157 (23%), Positives = 77/157 (49%), Gaps = 13/157 (8%) Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489 +NSE + F F ++ N + +Q ++R S+ ++ +++ +LD + P + E Sbjct: 217 RNSEYI-FSFNDAFHLNQSNALL-LQMKHSRLVSLEKRNEELMHELDAEKDPE--VALEL 272 Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV- 548 E +L+ HL ++ + ++ EP ++ YL LA++ G LR + Sbjct: 273 ELGEETRRLVAHLWQFDEALFSSWQKMEPCRVTVYLLQLANLV------GSAIASLRVMG 326 Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++R L+ RL L A ++ G+ +IG+E ++M Sbjct: 327 EPHDRALS--RLLLFAAARGVLKEGMKLIGLEPLDQM 361 >gi|148244477|ref|YP_001219171.1| isoleucyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA] gi|166229778|sp|A5CX61|SYI_VESOH RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|146326304|dbj|BAF61447.1| isoleucyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA] Length = 955 Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 62/116 (53%), Gaps = 7/116 (6%) Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKC-KYERGFDNM--IYVMGSD-HSGYVKRLEAV 370 +GDDV+ +D +F + +++F K + N+ +Y+ GSD H G+ + Sbjct: 508 FIGDDVNDYDKITDILDVWFDSGMSHFVVLKVRKELSNVADLYLEGSDQHRGWFQSSLIS 567 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 + A+++K NVL V + +DG KMSK G+ I+ + +V+ VG+D +R + Sbjct: 568 SVAINKKAPYKNVLTHGFV-VDKDGK--KMSKSLGNIISPQKIVNNVGADILRLWI 620 >gi|307171177|gb|EFN63164.1| Probable arginyl-tRNA synthetase, mitochondrial [Camponotus floridanus] Length = 57 Score = 40.8 bits (94), Expect = 0.58, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 28/49 (57%) Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173 +EF S N P H+GH R ++G+ +A++ +F V + Y+ D G Q Sbjct: 5 VEFSSPNIAKPFHLGHLRSTIIGNYIANINSFVENNVKKINYLGDWGTQ 53 >gi|34496043|ref|NP_900258.1| ketol-acid reductoisomerase [Chromobacterium violaceum ATCC 12472] gi|50400408|sp|Q7P0H9|ILVC_CHRVO RecName: Full=Ketol-acid reductoisomerase; AltName: Full=Acetohydroxy-acid isomeroreductase; AltName: Full=Alpha-keto-beta-hydroxylacil reductoisomerase gi|34101897|gb|AAQ58264.1| ketol-acid reductoisomerase [Chromobacterium violaceum ATCC 12472] Length = 338 Score = 40.8 bits (94), Expect = 0.62, Method: Compositional matrix adjust. Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 22/121 (18%) Query: 334 FAADLAYFKC----------KYERGFDNMIYVMG--SDHSGYVKRLEAVAAAVSE--KKA 379 +A ++AYF+C YE G NM Y + +++ YV E V AA E KKA Sbjct: 218 YAPEMAYFECLHELKLIVDLMYEGGIANMNYSISNNAEYGEYVTGPEVVTAATKEAMKKA 277 Query: 380 QINVLLCELVRLY----RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435 + E +++ + P ++R +T H +++VG++ +R MM W ++L+ Sbjct: 278 LYRIQSGEYAKMFILEGKTNYPSMTARRR---LTAAHPIEKVGAE-LRAMMPWIAKNKLV 333 Query: 436 D 436 D Sbjct: 334 D 334 >gi|18977468|ref|NP_578825.1| isoleucyl-tRNA synthetase [Pyrococcus furiosus DSM 3638] gi|18266873|sp|P46214|SYI_PYRFU RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|18893167|gb|AAL81220.1| isoleucyl-tRNA synthetase [Pyrococcus furiosus DSM 3638] Length = 1066 Score = 40.8 bits (94), Expect = 0.63, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 14/116 (12%) Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYA 457 KMSK G+ I VV++ G D+ RF MLW N E L F + V++ + + + Y Sbjct: 625 KMSKSLGNIIRPEEVVEKAGRDTFRFYMLWATNPWENLKFSWKGVEQVRRMLNILWNVYV 684 Query: 458 YARCRSIFRQAKDIFPDLD-FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 + + LD FD PRNV +E EF + ++ + + +EN Sbjct: 685 LSAT----------YMSLDNFD--PRNVKVEELEFREEDKWILSRVNNLIKEVENG 728 >gi|282859714|ref|ZP_06268815.1| isoleucine--tRNA ligase [Prevotella bivia JCVIHMP010] gi|282587525|gb|EFB92729.1| isoleucine--tRNA ligase [Prevotella bivia JCVIHMP010] Length = 1220 Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 86/207 (41%), Gaps = 30/207 (14%) Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR-DIIDNLARQGYVYEGI 290 +V DYS + KI DL + + ++E +GDP D+ID G + Sbjct: 633 VVGDYSQENYDKI---DLHRPFVDDIVLVNE----QGDPMHRESDLIDVWFDSGSMPYAQ 685 Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGF 349 L P T K ++R M D+ L+ S +Y A A+F + G Sbjct: 686 LHYPFEGTINKDGLER------LGMTEDEYREKLVHS--TYDGIAVPPAFFPADFINEGV 737 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 D G+ L A+A V + A NV+ LV D KMSK G+ I+ Sbjct: 738 DQT--------RGWFFTLHAIATMVFDSVAFKNVISTGLVL---DAKGNKMSKHVGNVIS 786 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLD 436 ++D+ G+D VRF M+ NSE D Sbjct: 787 PFEMLDKYGADPVRFYMM--TNSEPWD 811 >gi|302924209|ref|XP_003053837.1| hypothetical protein NECHADRAFT_31699 [Nectria haematococca mpVI 77-13-4] gi|256734778|gb|EEU48124.1| hypothetical protein NECHADRAFT_31699 [Nectria haematococca mpVI 77-13-4] Length = 635 Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 30/61 (49%) Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 G K +EF S N V H R +VG +A++ G++V + Y+ D G QI L Sbjct: 155 GSKKKAIVEFSSPNMESEFLVSHLRSTLVGSYVANIHTSMGWDVVKMNYLGDWGKQIGLL 214 Query: 178 A 178 A Sbjct: 215 A 215 >gi|307111087|gb|EFN59322.1| hypothetical protein CHLNCDRAFT_137710 [Chlorella variabilis] Length = 1113 Score = 40.4 bits (93), Expect = 0.73, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 7/106 (6%) Query: 342 KCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400 K ++ERGF G D + G+ L ++ A+ +K A N L+C + L DG KM Sbjct: 564 KERFERGFPADFVAEGLDQTRGWFYTLMVLSTALFDKPAFKN-LVCNGLVLAADGK--KM 620 Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446 SKR ++ VV++ G+D++R ++ NS ++ + K KE+ Sbjct: 621 SKRLKNYPDPMEVVNKHGADALRLYLI---NSPVVRAETLKFKEEG 663 >gi|195953483|ref|YP_002121773.1| cysteinyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1] gi|229558710|sp|B4U9I4|SYC_HYDS0 RecName: Full=Cysteinyl-tRNA synthetase; AltName: Full=Cysteine--tRNA ligase; Short=CysRS gi|195933095|gb|ACG57795.1| cysteinyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1] Length = 488 Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 16/97 (16%) Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 KMSK G+F+TL+ + + D +R ++L+ LDF F K++E K AY Sbjct: 266 KMSKSLGNFVTLKEIYTKYHPDVLRLLVLFTHYRSPLDFSFEKMEETKK---------AY 316 Query: 459 ARCRSIFRQ-------AKDIFPDLDFDLFPRNVIPQE 488 R +S AK+ P +D D + QE Sbjct: 317 ERLKSAIEDIEPLKAIAKEGKPVVDIDFYSLEKSTQE 353 >gi|304383075|ref|ZP_07365550.1| isoleucine--tRNA ligase [Prevotella marshii DSM 16973] gi|304335761|gb|EFM02016.1| isoleucine--tRNA ligase [Prevotella marshii DSM 16973] Length = 1143 Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 6/81 (7%) Query: 357 GSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 G D + G+ L A+A V + A NV+ LV D KMSKR G+ + ++D Sbjct: 654 GVDQTRGWFFTLHAIATMVFDSIAFKNVISTGLVL---DAKGNKMSKRVGNVVNPFDMID 710 Query: 416 EVGSDSVRFMMLWRKNSELLD 436 + G+D+VRF M+ NSE D Sbjct: 711 KYGADAVRFYMM--TNSEPWD 729 >gi|167769712|ref|ZP_02441765.1| hypothetical protein ANACOL_01046 [Anaerotruncus colihominis DSM 17241] gi|167668073|gb|EDS12203.1| hypothetical protein ANACOL_01046 [Anaerotruncus colihominis DSM 17241] Length = 690 Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust. Identities = 26/116 (22%), Positives = 50/116 (43%), Gaps = 19/116 (16%) Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 P+ +H+GH C V D +A G++V ++ G +I AL+ Sbjct: 49 PSDKLHIGHSYCTVATDVMARYKRMQGFDVMFLTGTDEHGQKIEQKALAA---------- 98 Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247 G P Y+ + + + ++ LLN ++++ DY V+++ KI +D Sbjct: 99 -------GVTPQAYVDKIVDGIKELWN--LLNISNDRFVRTTDDYHVESVQKIFKD 145 >gi|242000538|ref|XP_002434912.1| arginyl-tRNA synthetase, putative [Ixodes scapularis] gi|215498242|gb|EEC07736.1| arginyl-tRNA synthetase, putative [Ixodes scapularis] Length = 120 Score = 40.0 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 7/94 (7%) Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551 + S + L V LA++ + A + EP + YLY L+ GR N L V+ + Sbjct: 34 EPSAIALSVELAKFEDAVFGALVELEPCIVVQYLYSLSHAI------GRANKTL-IVKNH 86 Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++ RL L HA ++ GL ++G+ N+M Sbjct: 87 DTTVSSARLLLFHAARLTLSQGLKLLGIPPLNKM 120 >gi|294669508|ref|ZP_06734575.1| hypothetical protein NEIELOOT_01406 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308421|gb|EFE49664.1| hypothetical protein NEIELOOT_01406 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 337 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 16/120 (13%) Query: 334 FAADLAYFKC----------KYERGFDNMIYVMG--SDHSGYVKRLEAVAAAVSE--KKA 379 +A ++AYF+C YE G NM Y + +++ YV E + A E KKA Sbjct: 217 YAPEMAYFECLHELKLIVDLMYEGGIANMNYSISNNAEYGEYVTGPEVITPATKEAMKKA 276 Query: 380 QINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438 + E +++ ++G S A + H +++VG+ +R MM W ++L+D D Sbjct: 277 LYRIQSGEYAKMFIQEGATNYASMTARRRLNADHQIEKVGA-QLRSMMPWIAKNKLVDLD 335 >gi|156097282|ref|XP_001614674.1| arginyl-tRNA synthetase [Plasmodium vivax SaI-1] gi|148803548|gb|EDL44947.1| arginyl-tRNA synthetase, putative [Plasmodium vivax] Length = 977 Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust. Identities = 43/200 (21%), Positives = 84/200 (42%), Gaps = 25/200 (12%) Query: 3 LFADFSSRLKNYLKEI--DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 L A + +L+N K+I D +K+ K L +E + ++ + L LG Sbjct: 91 LHAALNKQLQNVAKQILRDENVKLPKHCL----LEENKLFDQYEYQSSVILFLEHSLGKG 146 Query: 61 PLTIAELI-VARIKIDPDVDSVFIAGKGFINLYLSPSYL-RKILSSIVVSGIEYGRNLIG 118 +E++ + R +DS+ ++ G +N+ ++ +++ R+ L G GR + Sbjct: 147 NDVRSEILRILRGTCADLIDSLHLSPNGILNIRVADAFVVREFLQFYRAGGAHMGRAAVE 206 Query: 119 KGTKVN----------------IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVT 162 GT N ++F N MH+GH + ++G+ L+++ Y V Sbjct: 207 GGTNNNFQKMETPQSGDRHTVLLDFCGVNMAKNMHMGHLKSLLLGNALSNIFRSLNYSVK 266 Query: 163 REYYINDAGAQINTLALSVF 182 +I D + + LS F Sbjct: 267 CRSHIGDWNMNM-AMVLSFF 285 >gi|309389952|gb|ADO77832.1| cysteinyl-tRNA synthetase [Halanaerobium praevalens DSM 2228] Length = 483 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 10/90 (11%) Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 KMSK G+F T R V+ E ++ VR+ +L R +DF + K++E + + Sbjct: 264 KMSKSQGNFFTSREVLKEFSAEVVRYFLLTRHYRSPIDFSYEKLEEAAT---------SL 314 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488 R ++ +Q + LD + N I QE Sbjct: 315 TRIKNTRKQLAKVLS-LDINSAAENKIEQE 343 >gi|257784983|ref|YP_003180200.1| cysteinyl-tRNA synthetase [Atopobium parvulum DSM 20469] gi|257473490|gb|ACV51609.1| cysteinyl-tRNA synthetase [Atopobium parvulum DSM 20469] Length = 493 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 5/97 (5%) Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 KMSK G+F TL+ V+D+ +D+VR +ML LDF F ++ + + ++ Sbjct: 265 KMSKSLGNFYTLKEVLDKYPADAVRLLMLQTHYRAPLDFSFERL--EGTVGTLERMKTCV 322 Query: 459 ARCRSIFRQ--AKDIFPDLDFDLFPRNVIPQESEFDT 493 A R ++Q A+ D D L I Q SEFD Sbjct: 323 ANLRWAYKQSSAQHELSDADRTLAEAINIAQ-SEFDA 358 >gi|14590903|ref|NP_142976.1| isoleucyl-tRNA synthetase [Pyrococcus horikoshii OT3] gi|6647822|sp|O58792|SYI_PYRHO RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|3257481|dbj|BAA30164.1| 1066aa long hypothetical isoleucyl-tRNA synthetase [Pyrococcus horikoshii OT3] Length = 1066 Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 14/116 (12%) Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYA 457 KMSK G+ I VV++ G D+ RF MLW N E L F + V++ + + + Y Sbjct: 625 KMSKSLGNIIRPEEVVEKAGRDTFRFYMLWATNPWENLKFSWKGVEQVRRMLNILWNVYV 684 Query: 458 YARCRSIFRQAKDIFPDLD-FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 + + LD FD PRNV +E F + ++ + R +EN Sbjct: 685 LSAT----------YMSLDNFD--PRNVKVEELAFREEDKWILSRVNSLIREVENG 728 >gi|195130981|ref|XP_002009929.1| GI14973 [Drosophila mojavensis] gi|193908379|gb|EDW07246.1| GI14973 [Drosophila mojavensis] Length = 451 Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust. Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 28/149 (18%) Query: 453 YVQYAYARCRSIFR--QAK------DIFPDLD-FDLFPRNVIPQESEFDTSELQLIV-HL 502 Y+ Y AR ++ R QA+ + P LD DL +V+ E E D QLI +L Sbjct: 315 YILYNSARLETLLRTFQAQVNLGVYESLPPLDKIDL---SVL--EDELD---WQLIYGYL 366 Query: 503 AEYPRVIENATIAQ------EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +P+V+E +T+AQ + L Y+ DLAS+F ++ H + + R N + Sbjct: 367 LTFPKVVE-STLAQLEQGLCAVHSLVRYIVDLASLFSRYYRHKQILVQQR---TNLMPVL 422 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 R+ LV AV ++NS L ++G+E + M Sbjct: 423 YARIYLVKAVRQVLNSALALLGIEPVDYM 451 >gi|291447746|ref|ZP_06587136.1| arginyl tRNA synthetase [Streptomyces roseosporus NRRL 15998] gi|291350693|gb|EFE77597.1| arginyl tRNA synthetase [Streptomyces roseosporus NRRL 15998] Length = 360 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 42/218 (19%), Positives = 80/218 (36%), Gaps = 50/218 (22%) Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456 P+ AG+ + + +G D+ R+ +L + ++ Q + NP+F V+Y Sbjct: 164 PVPAGATAGELL------ERLGPDAARWGLLRAAGHDRAALG-PELLVQGEANPLFRVRY 216 Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--------------- 501 A+AR R++ R A L F P + +D S H Sbjct: 217 AHARARALTRGAA----ALGFTAEP-------APYDESPAGPAAHVASPAAQAANAAPAA 265 Query: 502 --------------LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 +A++P V+ + P ++A L +V H + P L Sbjct: 266 TTAYDAAARPLLDLIADHPGVLLAGARHRAPDRVA---RQLEAVAHAFFDFHDSCPPLPA 322 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL + A +++ GL+++G+ +P + Sbjct: 323 GDEKPSAAHRARLAIAEAAGTVLAGGLSLLGIRAPEHL 360 >gi|148927744|ref|ZP_01811180.1| leucyl-tRNA synthetase [candidate division TM7 genomosp. GTL1] gi|147886907|gb|EDK72441.1| leucyl-tRNA synthetase [candidate division TM7 genomosp. GTL1] Length = 811 Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 132 PTGP-MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190 P+G MHVGH R +GDTLA M SGY V + G A+ QQA+ Sbjct: 43 PSGAAMHVGHVRNYTIGDTLARHMRMSGYNVLHPMGWDAFGLPAENYAIKTGISPQQAIK 102 Query: 191 NN 192 N Sbjct: 103 EN 104 >gi|303232418|ref|ZP_07319110.1| cysteine--tRNA ligase [Atopobium vaginae PB189-T1-4] gi|302481502|gb|EFL44570.1| cysteine--tRNA ligase [Atopobium vaginae PB189-T1-4] Length = 508 Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust. Identities = 20/45 (44%), Positives = 27/45 (60%) Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443 KMSK G+F TL+ V+D +D VR +ML LDF F ++K Sbjct: 266 KMSKSLGNFYTLKDVLDTYSADEVRLLMLQTHYRAPLDFSFERLK 310 >gi|225024862|ref|ZP_03714054.1| hypothetical protein EIKCOROL_01750 [Eikenella corrodens ATCC 23834] gi|224942391|gb|EEG23600.1| hypothetical protein EIKCOROL_01750 [Eikenella corrodens ATCC 23834] Length = 337 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 16/118 (13%) Query: 334 FAADLAYFKC----------KYERGFDNMIYVMG--SDHSGYVKRLEAVAAAVSE--KKA 379 +A ++AYF+C YE G NM Y + +++ YV E + A E KKA Sbjct: 217 YAPEMAYFECLHELKLIVDLMYEGGIANMNYSISNNAEYGEYVTGPEVITPATKEAMKKA 276 Query: 380 QINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 + E +++ ++G S A +T H +++VG+ +R MM W ++L+D Sbjct: 277 LYRIQSGEYAKMFIQEGATNYASMTARRRLTADHQIEKVGA-QLRSMMPWIAKNKLVD 333 >gi|221194861|ref|ZP_03567918.1| cysteinyl-tRNA synthetase [Atopobium rimae ATCC 49626] gi|221185765|gb|EEE18155.1| cysteinyl-tRNA synthetase [Atopobium rimae ATCC 49626] Length = 513 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 19/41 (46%), Positives = 25/41 (60%) Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439 KMSK G+F TL+ V+D +D+VR +ML LDF F Sbjct: 265 KMSKSLGNFYTLKEVLDSYSADAVRLLMLQTHYRASLDFSF 305 >gi|83815822|ref|YP_444601.1| isoleucyl-tRNA synthetase [Salinibacter ruber DSM 13855] gi|83757216|gb|ABC45329.1| isoleucyl-tRNA synthetase [Salinibacter ruber DSM 13855] Length = 1080 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 4/84 (4%) Query: 345 YERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403 +E F G D + G+ L A+A V ++ A NV++ LV L DG KMSK Sbjct: 554 FEANFPADFIAEGVDQTRGWFYSLHAIATVVFDEVAYENVVVNGLV-LDEDGN--KMSKS 610 Query: 404 AGDFITLRHVVDEVGSDSVRFMML 427 G+ + V+D+ G+D VR+ M+ Sbjct: 611 VGNTVEPFEVIDDYGADVVRWFMM 634 >gi|41615033|ref|NP_963531.1| leucyl-tRNA synthetase [Nanoarchaeum equitans Kin4-M] gi|48428516|sp|P61760|SYL_NANEQ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|40068757|gb|AAR39092.1| NEQ239 [Nanoarchaeum equitans Kin4-M] Length = 977 Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust. Identities = 17/38 (44%), Positives = 24/38 (63%) Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 KMSK G+FIT+R + G D+VR + N+EL+D Sbjct: 699 KMSKSKGNFITIREAIQRYGRDAVRLAAAYAGNAELVD 736 >gi|294506347|ref|YP_003570405.1| isoleucyl-tRNA synthetase [Salinibacter ruber M8] gi|294342675|emb|CBH23453.1| isoleucyl-tRNA synthetase [Salinibacter ruber M8] Length = 1080 Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 4/84 (4%) Query: 345 YERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403 +E F G D + G+ L A+A V ++ A NV++ LV L DG KMSK Sbjct: 554 FEANFPADFIAEGVDQTRGWFYSLHAIATVVFDEVAYENVVVNGLV-LDEDGN--KMSKS 610 Query: 404 AGDFITLRHVVDEVGSDSVRFMML 427 G+ + V+D+ G+D VR+ M+ Sbjct: 611 VGNTVEPFEVIDDYGADVVRWFMM 634 >gi|226939092|ref|YP_002794163.1| ketol-acid reductoisomerase [Laribacter hongkongensis HLHK9] gi|254803574|sp|C1DA41|ILVC_LARHH RecName: Full=Ketol-acid reductoisomerase; AltName: Full=Acetohydroxy-acid isomeroreductase; AltName: Full=Alpha-keto-beta-hydroxylacil reductoisomerase gi|226714016|gb|ACO73154.1| IlvC [Laribacter hongkongensis HLHK9] Length = 338 Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 22/121 (18%) Query: 334 FAADLAYFKC----------KYERGFDNMIYVMG--SDHSGYVKRLEAVAAAVSE--KKA 379 +A ++AYF+C YE G NM Y + +++ YV E + AA E KKA Sbjct: 218 YAPEMAYFECLHELKLIVDLMYEGGIANMNYSISNNAEYGEYVTGPEVITAASKEAMKKA 277 Query: 380 QINVLLCELVRLY----RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELL 435 + E +++ + P ++R +T H +++VG++ +R MM W ++L+ Sbjct: 278 LYRIQSGEYAKMFILEGKTNYPSMTARRR---LTADHPIEKVGAE-LRAMMPWIAKNKLV 333 Query: 436 D 436 D Sbjct: 334 D 334 >gi|239944278|ref|ZP_04696215.1| putative arginyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998] gi|239990733|ref|ZP_04711397.1| putative arginyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379] Length = 382 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 42/218 (19%), Positives = 80/218 (36%), Gaps = 50/218 (22%) Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456 P+ AG+ + + +G D+ R+ +L + ++ Q + NP+F V+Y Sbjct: 186 PVPAGATAGELL------ERLGPDAARWGLLRAAGHDRAALG-PELLVQGEANPLFRVRY 238 Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH--------------- 501 A+AR R++ R A L F P + +D S H Sbjct: 239 AHARARALTRGAA----ALGFTAEP-------APYDESPAGPAAHVASPAAQAANAAPAA 287 Query: 502 --------------LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 +A++P V+ + P ++A L +V H + P L Sbjct: 288 TTAYDAAARPLLDLIADHPGVLLAGARHRAPDRVA---RQLEAVAHAFFDFHDSCPPLPA 344 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL + A +++ GL+++G+ +P + Sbjct: 345 GDEKPSAAHRARLAIAEAAGTVLAGGLSLLGIRAPEHL 382 >gi|50549799|ref|XP_502371.1| YALI0D03619p [Yarrowia lipolytica] gi|49648239|emb|CAG80559.1| YALI0D03619p [Yarrowia lipolytica] Length = 532 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 18/171 (10%) Query: 347 RGFDNM---IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403 +GFD + ++++G D ++R A+ A I LV + KMSK Sbjct: 259 QGFDTVSEAVHIVGKD----IQRFHAIYWPAFLLAAGIKPPKSVLVHSHWISEGQKMSKS 314 Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463 G+ + HV+ + GSDSVRF+++ + D DF + K K N + + Sbjct: 315 IGNVVDPMHVISKYGSDSVRFLLMCDGHLH-KDNDFTETKIAEKHNTMLVNKLG----NL 369 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQE------SEFDTSELQLIVHLAEYPRV 508 + R F +D PR ++ EF T+ +LI L E P V Sbjct: 370 LMRITSAKFNLVDSLEQPRQKTVEDMAEFFGPEFTTTRNELIRALKELPDV 420 >gi|114327800|ref|YP_744957.1| cysteinyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1] gi|122327235|sp|Q0BT18|SYC_GRABC RecName: Full=Cysteinyl-tRNA synthetase; AltName: Full=Cysteine--tRNA ligase; Short=CysRS gi|114315974|gb|ABI62034.1| cysteinyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1] Length = 470 Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 10/78 (12%) Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 KMSK G+ +T+R ++ + +++R + L +LDF + +KE KE FY Sbjct: 288 KMSKSLGNVLTVRDLLGQADGEAIRLLFLKTHYRGVLDFRYEALKEAGKELDRFY----- 342 Query: 459 ARCRSIFRQAKDIFPDLD 476 R++ QA PDLD Sbjct: 343 ---RAL--QAHPALPDLD 355 >gi|289450479|ref|YP_003475345.1| isoleucine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289185026|gb|ADC91451.1| isoleucine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 1071 Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust. Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 12/122 (9%) Query: 345 YERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403 +E F D + G+ L A++ + ++ NV++ LV+ +DG IKMSK Sbjct: 568 FEANFPAQFISEAQDQTRGWFYSLMAISTLLFDRTPYENVIVMGLVQ-DKDG--IKMSKH 624 Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD-FDFCKVKEQSKE-------NPVFYVQ 455 G+ I+ + +D +GSD+VR+ N L F F V E + FY+ Sbjct: 625 KGNVISPQEAIDRMGSDAVRWYFYTNSNPWLPSRFSFDSVAEGQRRFMGTLWNTYAFYIL 684 Query: 456 YA 457 YA Sbjct: 685 YA 686 >gi|148260406|ref|YP_001234533.1| cysteinyl-tRNA synthetase [Acidiphilium cryptum JF-5] gi|187629816|sp|A5FYD2|SYC_ACICJ RecName: Full=Cysteinyl-tRNA synthetase; AltName: Full=Cysteine--tRNA ligase; Short=CysRS gi|146402087|gb|ABQ30614.1| cysteinyl-tRNA synthetase [Acidiphilium cryptum JF-5] Length = 449 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 31/55 (56%) Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453 KMSK G+F T++ V+ E ++VRF++L +LDF + E +E FY Sbjct: 268 KMSKSLGNFRTVQDVLGEAPGEAVRFLLLKTHYRGVLDFSTAALAEAKRELDRFY 322 >gi|228470963|ref|ZP_04055808.1| isoleucine-tRNA ligase [Porphyromonas uenonis 60-3] gi|228307360|gb|EEK16374.1| isoleucine-tRNA ligase [Porphyromonas uenonis 60-3] Length = 1137 Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 5/94 (5%) Query: 357 GSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 G D + G+ L A+A A NVL+ LV L +DG KMSKR G+ + V+ Sbjct: 650 GVDQTRGWFFTLHAIATMTQGSIAFRNVLVNGLV-LDKDGN--KMSKRLGNAVDPFGVIQ 706 Query: 416 EVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKE 448 + GSD +R+ M+ N E + FD V+E S++ Sbjct: 707 QYGSDPLRWYMITNANPWENIRFDPKGVEEVSRK 740 >gi|119719481|ref|YP_919976.1| leucyl-tRNA synthetase [Thermofilum pendens Hrk 5] gi|119524601|gb|ABL77973.1| leucyl-tRNA synthetase [Thermofilum pendens Hrk 5] Length = 977 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 1/61 (1%) Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 KMSK AG+FI LR ++ G+D+ RF + NS L D +F + + SK + Y Y + Sbjct: 658 KMSKSAGNFILLREALEYWGADATRFAEAYAGNSGLDDGNF-EPEVASKAVDLLYEWYEF 716 Query: 459 A 459 A Sbjct: 717 A 717 >gi|299140905|ref|ZP_07034043.1| isoleucine--tRNA ligase [Prevotella oris C735] gi|298577871|gb|EFI49739.1| isoleucine--tRNA ligase [Prevotella oris C735] Length = 1211 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 44/156 (28%), Positives = 63/156 (40%), Gaps = 28/156 (17%) Query: 281 ARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAY 340 A+Q Y +EG + K T K + + ++ L ST G V Y+ AD Sbjct: 675 AQQHYPFEGEIASEGLKATGKSEEEYRRELVTSTYEGIPV---------PPAYYPADFI- 724 Query: 341 FKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400 G D G+ L A++ V + A NV+ LV D KM Sbjct: 725 -----NEGVDQT--------RGWFFTLHAISTMVFDHVAFKNVISTGLVL---DAKGNKM 768 Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 SK G+ ++D+ G+D VRF M+ NSE D Sbjct: 769 SKHVGNVTNPFEMIDKYGADPVRFYMI--TNSEPWD 802 >gi|160933682|ref|ZP_02081070.1| hypothetical protein CLOLEP_02543 [Clostridium leptum DSM 753] gi|156867559|gb|EDO60931.1| hypothetical protein CLOLEP_02543 [Clostridium leptum DSM 753] Length = 650 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 19/116 (16%) Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 P+G H+GH C V D +A GY+V ++ G +I A Sbjct: 15 PSGKAHIGHSYCTVATDAIARYKRMQGYDVMFLTGTDEHGQKIELNAAKA---------- 64 Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247 G P Y+ + + + +LLN ++++ DY V+A+ KI ++ Sbjct: 65 -------GVTPKEYVDEIVAGFQELW--KLLNISNDRFIRTTDDYHVKAVQKIFKE 111 >gi|333030518|ref|ZP_08458579.1| Isoleucyl-tRNA synthetase [Bacteroides coprosuis DSM 18011] gi|332741115|gb|EGJ71597.1| Isoleucyl-tRNA synthetase [Bacteroides coprosuis DSM 18011] Length = 1141 Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust. Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 4/72 (5%) Query: 357 GSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 G D + G+ L A+A V + KA NV+ LV L ++G KMSKR G+ + H ++ Sbjct: 649 GVDQTRGWFFTLHAIATMVFDTKAYKNVISNGLV-LDKNGN--KMSKRLGNGVDPFHAIE 705 Query: 416 EVGSDSVRFMML 427 + GSD +R+ M+ Sbjct: 706 KYGSDPLRWYMV 717 >gi|284048830|ref|YP_003399169.1| isoleucyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731] gi|283953051|gb|ADB47854.1| isoleucyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731] Length = 934 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 17/129 (13%) Query: 353 IYVMGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 +Y+ GSD H G+ + + AV+ K +VL V DG KMSK G+ + + Sbjct: 566 MYLEGSDQHRGWFQSSLLTSVAVTGKAPYRSVLTHGYVL---DGEGRKMSKSLGNVVVPQ 622 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY--AYARCRSIFRQAK 469 V+D+ G+D VR LW +S+ K+ + +PV Q AY + R+ R Sbjct: 623 EVIDQYGADIVR---LWAASSDY--------KQDVRISPVILKQLAEAYRKVRNTIRYIL 671 Query: 470 DIFPDLDFD 478 D D++ Sbjct: 672 GNTHDFDYE 680 >gi|124783875|gb|ABN14954.1| arginyl-tRNA synthetase [Taenia asiatica] Length = 207 Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust. Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 7/119 (5%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLD-----PLTIAELIVARIKIDPDVDSVFIAGKG 87 V+ R G N + L+R D P+ A+ I + ++ V IAG G Sbjct: 89 VMTRSSHPNFGDYQCNNGLSLARKFSADGTKISPVEAAKKICEHLVKGLLIEKVDIAGPG 148 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 FIN+++S ++ + ++ +V G + + K ++ S N MHVGH R ++ Sbjct: 149 FINIFISRCFVEEEVNKLVRLG--FSLPPPQRRLKCIVDMSSPNIAKEMHVGHLRSTII 205 >gi|260907530|ref|ZP_05915852.1| arginyl-tRNA synthetase [Brevibacterium linens BL2] Length = 101 Score = 38.9 bits (89), Expect = 2.6, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 3/75 (4%) Query: 30 DRI---VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGK 86 DRI + R + HGH + A+ + + D ++A I +R+ D + V +AG Sbjct: 26 DRIPEPTLRRGQTPRHGHWVSPIALRSAGAVHTDSRSLAVEIASRLHDDASIAEVEVAGP 85 Query: 87 GFINLYLSPSYLRKI 101 GF+N+ L+PS L I Sbjct: 86 GFLNITLTPSALAVI 100 >gi|72162825|ref|YP_290482.1| arginyl-tRNA synthetase [Thermobifida fusca YX] gi|71916557|gb|AAZ56459.1| similar to Arginyl-tRNA synthetase [Thermobifida fusca YX] Length = 416 Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust. Identities = 20/70 (28%), Positives = 31/70 (44%) Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575 +P+ L YL LA+ +H W P + RL L A A ++ +GL Sbjct: 347 HQPHILVRYLESLAAAYHEWWESHSVLPGHEGTADTHTTTVAARLDLCAAAAGVLRAGLL 406 Query: 576 IIGVESPNEM 585 +IGV +P + Sbjct: 407 LIGVSAPTRL 416 >gi|40063564|gb|AAR38353.1| valyl-tRNA synthetase [uncultured marine bacterium 582] Length = 965 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%) Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 +V R+ + AV +K V L +LVR D KMSK G+ I +VDE G+D++ Sbjct: 579 WVARMMMMQQAVVDKDPFHTVYLHQLVR---DEKGHKMSKTKGNVIDPLEIVDEFGADAL 635 Query: 423 RFMM 426 RF M Sbjct: 636 RFTM 639 >gi|256081682|ref|XP_002577097.1| arginyl-tRNA synthetase [Schistosoma mansoni] gi|238662392|emb|CAZ33334.1| arginyl-tRNA synthetase, putative [Schistosoma mansoni] Length = 494 Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V +++ S N P H+GH R V G+ + ++ G++V YI D G Q + LA S F Sbjct: 34 VVVDYSSPNIAKPFHLGHFRATVTGNFVKNVNEAFGHKVIGINYIGDWGTQFDILA-SGF 92 Query: 183 WRY 185 +Y Sbjct: 93 SKY 95 >gi|323126698|gb|ADX23995.1| methionyl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 665 Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust. Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 23/131 (17%) Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 P+G +H+G + D LA GYEV +++ G +I T A Sbjct: 14 PSGKLHIGSAYTTIACDVLARYKRLMGYEVFYLTGLDEHGQKIQTKAAEA---------- 63 Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251 G P Y+ ++ K++ D + +LL+ K++ DY + + + + Sbjct: 64 -------GISPQTYVDNMAKDVKDLW--QLLDISYNKFIRTTDDYHEEVVAAV----FEK 110 Query: 252 LNIQHDIFISE 262 L Q DI++ E Sbjct: 111 LLAQDDIYLGE 121 >gi|114567117|ref|YP_754271.1| leucyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122317896|sp|Q0AWK4|SYL_SYNWW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA ligase; Short=LeuRS gi|114338052|gb|ABI68900.1| leucyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 824 Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 15/107 (14%) Query: 381 INVLLCE--LVRLYRDGMPIK----MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434 INVL C+ RL GM +K MSK G+ ++ ++D G+D+ R +L+ E Sbjct: 557 INVLSCQEPFTRLLTQGMVLKDNAKMSKSKGNVVSPEEIIDTYGADTARLFILFASPPE- 615 Query: 435 LDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI-----FPDLD 476 D ++ EQ E ++ + + KD+ FP+LD Sbjct: 616 RDLEW---SEQGVEGAFRFLNRVWRLVSELAEGIKDLPAAEHFPELD 659 >gi|260906190|ref|ZP_05914512.1| arginyl-tRNA synthetase [Brevibacterium linens BL2] Length = 300 Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust. Identities = 23/92 (25%), Positives = 42/92 (45%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + L L I ++ + + R + HGH + A+ + + D ++A Sbjct: 6 LQTALARALASIASARGIDSDRIPEPTLRRGQTPRHGHWVSPIALRSAGAVHTDSRSLAV 65 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYL 98 I +R+ D + V +AG GF+N+ L+PS L Sbjct: 66 EIASRLHDDASIAEVEVAGPGFLNITLTPSAL 97 >gi|84686162|ref|ZP_01014057.1| valyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654] gi|84665689|gb|EAQ12164.1| valyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654] Length = 1030 Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 11/77 (14%) Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407 GFD + + +V R+ + AV EK+ V L +LVR D KMSK G+ Sbjct: 636 GFDILFF--------WVARMMMMQLAVVEKEPFHTVYLHQLVR---DEKGKKMSKTTGNV 684 Query: 408 ITLRHVVDEVGSDSVRF 424 I ++DE G+D++RF Sbjct: 685 IDPLEIIDEYGADALRF 701 >gi|152964879|ref|YP_001360663.1| cysteinyl-tRNA synthetase [Kineococcus radiotolerans SRS30216] gi|189082067|sp|A6W6G0|SYC_KINRD RecName: Full=Cysteinyl-tRNA synthetase; AltName: Full=Cysteine--tRNA ligase; Short=CysRS gi|151359396|gb|ABS02399.1| cysteinyl-tRNA synthetase [Kineococcus radiotolerans SRS30216] Length = 471 Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 24/48 (50%) Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169 +V I A P G H+GH R VV D L + SGYEVT + D Sbjct: 23 QVGIYVCGATPQGSPHLGHVRAQVVFDVLRRWLVRSGYEVTLVRNVTD 70 >gi|182678882|ref|YP_001833028.1| cysteinyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC 9039] gi|229558617|sp|B2IEE1|SYC_BEII9 RecName: Full=Cysteinyl-tRNA synthetase; AltName: Full=Cysteine--tRNA ligase; Short=CysRS gi|182634765|gb|ACB95539.1| cysteinyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC 9039] Length = 458 Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 32/55 (58%) Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453 KMSK G+F+T+R V+ + ++VRF ML + +D+ ++E +E +Y Sbjct: 269 KMSKSLGNFLTIRDVLKDWPGETVRFTMLKTHYRQPIDWTLSSLRESQRELDRWY 323 >gi|167623065|ref|YP_001673359.1| isoleucyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4] gi|189082332|sp|B0TJA9|SYI_SHEHH RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|167353087|gb|ABZ75700.1| isoleucyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4] Length = 940 Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust. Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 8/119 (6%) Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER----GFDNMIYVMGSD-HSGYVKRL 367 S ++GD+ D+ +D ++ + + R G D +Y+ GSD H G+ Sbjct: 517 SELLGDEADQYRKVTDTLDVWYDSGSTFSTVVAARPEFHGHDIDLYLEGSDQHRGWFMSS 576 Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 ++ A++ K VL DG KMSK G+ I+ +HV +++G+D +R + Sbjct: 577 LMISTAMNGKAPYKQVLTHGFTV---DGQGRKMSKSVGNVISPQHVTNKLGADILRLWV 632 >gi|300120333|emb|CBK19887.2| unnamed protein product [Blastocystis hominis] Length = 1092 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 4/84 (4%) Query: 345 YERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403 +E F G D + G+ L ++ A+ +K A NV++ LV L DG KMSKR Sbjct: 559 FEANFPAQFIAEGLDQTRGWFYTLMVLSTALFDKPAWKNVIVNGLV-LAEDGK--KMSKR 615 Query: 404 AGDFITLRHVVDEVGSDSVRFMML 427 ++ + ++D+ G+DSVR ++ Sbjct: 616 LKNYPDPQTIIDKYGADSVRLYLI 639 >gi|15616769|ref|NP_239981.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11134943|sp|P57249|SYI_BUCAI RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|25293003|pir||C84947 isoleucine-tRNA ligase (EC 6.1.1.5) [imported] - Buchnera sp. (strain APS) gi|10038832|dbj|BAB12867.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 940 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 4/75 (5%) Query: 353 IYVMGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 +++ GSD H G+ ++ +SEKK VL V DG KMSK G+ I+ Sbjct: 560 MFLEGSDQHRGWFMSSLIISTLISEKKPYSEVLTHGFVV---DGKGQKMSKSIGNTISPN 616 Query: 412 HVVDEVGSDSVRFMM 426 +VD +G+D +R + Sbjct: 617 EIVDTLGADILRLWV 631 >gi|219681524|ref|YP_002467909.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682080|ref|YP_002468464.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471205|ref|ZP_05635204.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|254782372|sp|B8D8V0|SYI_BUCA5 RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|254782373|sp|B8D754|SYI_BUCAT RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|219621813|gb|ACL29969.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624367|gb|ACL30522.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311086464|gb|ADP66545.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087045|gb|ADP67125.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 940 Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 4/75 (5%) Query: 353 IYVMGSD-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 +++ GSD H G+ ++ +SEKK VL V DG KMSK G+ I+ Sbjct: 560 MFLEGSDQHRGWFMSSLIISTLISEKKPYSEVLTHGFVV---DGKGQKMSKSIGNTISPN 616 Query: 412 HVVDEVGSDSVRFMM 426 +VD +G+D +R + Sbjct: 617 EIVDTLGADILRLWV 631 >gi|269114822|ref|YP_003302585.1| Valyl-tRNA synthetase [Mycoplasma hominis] gi|268322447|emb|CAX37182.1| Valyl-tRNA synthetase [Mycoplasma hominis ATCC 23114] Length = 839 Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 12/105 (11%) Query: 332 TYFAADLAYF--------KCKYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQIN 382 T+F++ LA F K K +R F + V G D +V R+ + ++K + Sbjct: 439 TWFSSGLAPFVFLGWPQDKSKLKRYFPTSLLVTGYDIIFFWVARMYFFSLYFMDQKPFEH 498 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 +LL LVR D KMSK G+ I V+DE GSD +R ++ Sbjct: 499 LLLHGLVR---DSQGRKMSKSLGNGINPIQVIDEYGSDVLRMSLI 540 >gi|308234253|ref|ZP_07664990.1| cysteinyl-tRNA synthetase [Atopobium vaginae DSM 15829] gi|328943535|ref|ZP_08241000.1| cysteine--tRNA ligase [Atopobium vaginae DSM 15829] gi|327491504|gb|EGF23278.1| cysteine--tRNA ligase [Atopobium vaginae DSM 15829] Length = 490 Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust. Identities = 19/41 (46%), Positives = 25/41 (60%) Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439 KMSK G+F TL+ V+D +D+VR +ML LDF F Sbjct: 265 KMSKSLGNFYTLKEVLDAYPADAVRLLMLQTHYRAPLDFSF 305 >gi|170758335|ref|YP_001785405.1| methionyl-tRNA synthetase [Clostridium botulinum A3 str. Loch Maree] gi|169405324|gb|ACA53735.1| methionine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree] Length = 645 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 31/131 (23%), Positives = 56/131 (42%), Gaps = 23/131 (17%) Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 P+ +H+G+ V DTLA +GY+V ++ G +I LA + Sbjct: 15 PSAKLHIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLAEA----------- 63 Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251 E P Y+ + + D + +++N +K++ +Y V+ + KI K Sbjct: 64 ------EKVTPKAYVDEIVAGIKDLW--KIMNIDYDKFIRTTDEYHVELVQKI----FKT 111 Query: 252 LNIQHDIFISE 262 L + DI+ SE Sbjct: 112 LYDKGDIYKSE 122 >gi|288818357|ref|YP_003432705.1| leucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] gi|288787757|dbj|BAI69504.1| leucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] gi|308751950|gb|ADO45433.1| leucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] Length = 606 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 16/43 (37%), Positives = 25/43 (58%) Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEV 161 +G KV + + P+G +H+GH R +GD +A + F GY V Sbjct: 28 EGKKVYVLEMFPYPSGRIHMGHVRNYTIGDVVARFLRFKGYRV 70 >gi|298709584|emb|CBJ31410.1| Isoleucyl-tRNA Synthetase [Ectocarpus siliculosus] Length = 1193 Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 7/127 (5%) Query: 342 KCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKM 400 K K+E+ F G D + G+ L + AA+ +K A N+++ LV L DG KM Sbjct: 566 KDKFEKNFPADFIAEGLDQTRGWFYTLTVLGAALFDKPAFKNLIVNGLV-LASDGK--KM 622 Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460 SKR ++ V+D G+D++R ++ NS ++ + K KE+ + V V + Sbjct: 623 SKRLKNYPDPMKVIDSHGADALRLYLI---NSPVVRAESLKFKEEGVQATVREVLLPWFN 679 Query: 461 CRSIFRQ 467 F Q Sbjct: 680 AFRFFVQ 686 >gi|15603527|ref|NP_246601.1| isoleucyl-tRNA synthetase [Pasteurella multocida subsp. multocida str. Pm70] gi|81636547|sp|Q9CKF7|SYI_PASMU RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|12722068|gb|AAK03746.1| IleS [Pasteurella multocida subsp. multocida str. Pm70] Length = 932 Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 14/129 (10%) Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER----GFDNMIYVMGS 358 D+D +LL G D D + D +F + Y+ +R G + +Y+ GS Sbjct: 511 DLDTAELL------GADADNYIKVPDTLDVWFDSGSTYYSVVKDRPEFNGQEADMYLEGS 564 Query: 359 D-HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 D H G+ ++ A K VL DG KMSK G+ +T + V+D+ Sbjct: 565 DQHRGWFMSSLMLSTATDNKAPYKQVLTHGFTV---DGQGRKMSKSIGNIVTPQEVMDKF 621 Query: 418 GSDSVRFMM 426 G D +R + Sbjct: 622 GGDILRLWV 630 >gi|27262230|gb|AAN87396.1| Cysteinyl-tRNA synthetase [Heliobacillus mobilis] Length = 454 Score = 37.7 bits (86), Expect = 4.9, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 27/49 (55%) Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 KMSK G+F TLR ++ + D VRF +L LDFD K++ K Sbjct: 239 KMSKSLGNFFTLRQILKKFSGDVVRFYLLSTHYRSPLDFDDTKLEAAQK 287 >gi|294631394|ref|ZP_06709954.1| arginyl-tRNA synthetase [Streptomyces sp. e14] gi|292834727|gb|EFF93076.1| arginyl-tRNA synthetase [Streptomyces sp. e14] Length = 221 Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust. Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 2/86 (2%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 +R+V+ P G +TN A+ L+RP G L +A+++ + + V + G GF+ Sbjct: 29 ERVVVTPPGAGGCGDYATNVALQLARPAGQPALRVADVLRGHLLNLDGIRDVSVTGPGFL 88 Query: 90 NLYL--SPSYLRKILSSIVVSGIEYG 113 N+ L + ++++ I+ G YG Sbjct: 89 NISLRAGDAGAQRLVEEILRRGQRYG 114 >gi|188997007|ref|YP_001931258.1| isoleucyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1] gi|259511518|sp|B2V9T1|SYI_SULSY RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|188932074|gb|ACD66704.1| isoleucyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1] Length = 939 Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 23/159 (14%) Query: 353 IYVMGSD-HSGYVKR--LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 +Y+ GSD H G+ + LE+VA S +A + +L L G KMSK AG+ + Sbjct: 560 MYLEGSDQHRGWFQSSLLESVA---SYNRAPYDTVLTHGFTLDEKGR--KMSKSAGNVVA 614 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR--- 466 V+ E G+D +R ++ +E + F +K +++ Y + R+ FR Sbjct: 615 PEKVIKEYGADILRLWVVTEDYTEDIKIGFNLIKRIAED---------YRKIRNTFRYFL 665 Query: 467 -QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 D P+ D+ P + + + S+LQ I+ +A+ Sbjct: 666 GNLYDFNPNQDY--VPYENLLEIDRWMLSKLQNIIQIAD 702 >gi|57239215|ref|YP_180351.1| isoleucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] gi|161598454|ref|YP_197385.2| isoleucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] gi|57161294|emb|CAH58215.1| isoleucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] Length = 1104 Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 75/191 (39%), Gaps = 33/191 (17%) Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 V +K + DD+KAL DI I DD HR IDNL R P K Sbjct: 504 VYGSIKKVFDDIKALEEDFDIPI--DDLHRP-------YIDNLVRPN------PDDPTGK 548 Query: 298 TTQKCDMDRKQLLFRS-TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + + D F S +M + P + YF AD RG+ ++V+ Sbjct: 549 SMMRRVTDVFDCWFESGSMPYAQLHYPFENKELFENYFPADFITEYVAQTRGWFYTLFVL 608 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 + A+ +K N + C V L G K+SKR ++ + + Sbjct: 609 --------------STALFDKPPFKNCI-CHGVVLDTQGQ--KLSKRLNNYADPMEIFKQ 651 Query: 417 VGSDSVRFMML 427 GSD++RF+ML Sbjct: 652 YGSDAMRFLML 662 >gi|84029517|sp|Q5FH91|SYI_EHRRG RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS Length = 1118 Score = 37.7 bits (86), Expect = 5.5, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 75/191 (39%), Gaps = 33/191 (17%) Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 V +K + DD+KAL DI I DD HR IDNL R P K Sbjct: 517 VYGSIKKVFDDIKALEEDFDIPI--DDLHRP-------YIDNLVRPN------PDDPTGK 561 Query: 298 TTQKCDMDRKQLLFRS-TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + + D F S +M + P + YF AD RG+ ++V+ Sbjct: 562 SMMRRVTDVFDCWFESGSMPYAQLHYPFENKELFENYFPADFITEYVAQTRGWFYTLFVL 621 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 + A+ +K N + C V L G K+SKR ++ + + Sbjct: 622 ST--------------ALFDKPPFKNCI-CHGVVLDTQGQ--KLSKRLNNYADPMEIFKQ 664 Query: 417 VGSDSVRFMML 427 GSD++RF+ML Sbjct: 665 YGSDAMRFLML 675 >gi|161986610|ref|YP_196426.2| isoleucyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel] Length = 1105 Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 75/191 (39%), Gaps = 33/191 (17%) Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 V +K + DD+KAL DI I DD HR IDNL R P K Sbjct: 504 VYGSIKKVFDDIKALEEDFDIPI--DDLHRP-------YIDNLVRPN------PDDPTGK 548 Query: 298 TTQKCDMDRKQLLFRS-TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + + D F S +M + P + YF AD RG+ ++V+ Sbjct: 549 SMMRRVTDVFDCWFESGSMPYAQLHYPFENKELFENYFPADFITEYVAQTRGWFYTLFVL 608 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 + A+ +K N + C V L G K+SKR ++ + + Sbjct: 609 --------------STALFDKPPFKNCI-CHGVVLDTQGQ--KLSKRLNNYADPMEIFKQ 651 Query: 417 VGSDSVRFMML 427 GSD++RF+ML Sbjct: 652 YGSDAMRFLML 662 >gi|84029518|sp|Q5HB43|SYI_EHRRW RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS Length = 1117 Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 75/191 (39%), Gaps = 33/191 (17%) Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 V +K + DD+KAL DI I DD HR IDNL R P K Sbjct: 517 VYGSIKKVFDDIKALEEDFDIPI--DDLHRP-------YIDNLVRPN------PDDPTGK 561 Query: 298 TTQKCDMDRKQLLFRS-TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + + D F S +M + P + YF AD RG+ ++V+ Sbjct: 562 SMMRRVTDVFDCWFESGSMPYAQLHYPFENKELFENYFPADFITEYVAQTRGWFYTLFVL 621 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 + A+ +K N + C V L G K+SKR ++ + + Sbjct: 622 ST--------------ALFDKPPFKNCI-CHGVVLDTQGQ--KLSKRLNNYADPMEIFKQ 664 Query: 417 VGSDSVRFMML 427 GSD++RF+ML Sbjct: 665 YGSDAMRFLML 675 >gi|220930944|ref|YP_002507852.1| cysteinyl-tRNA synthetase [Halothermothrix orenii H 168] gi|219992254|gb|ACL68857.1| cysteinyl-tRNA synthetase [Halothermothrix orenii H 168] Length = 484 Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 29/49 (59%) Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 KMSK G+F T+R ++ E D VR+ +L + +DF+F +V+ K Sbjct: 266 KMSKSLGNFFTVREILKEFKPDEVRYFLLTKHYRSPIDFNFEEVEAARK 314 >gi|58416839|emb|CAI27952.1| Isoleucyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel] Length = 1125 Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 75/191 (39%), Gaps = 33/191 (17%) Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 V +K + DD+KAL DI I DD HR IDNL R P K Sbjct: 524 VYGSIKKVFDDIKALEEDFDIPI--DDLHRP-------YIDNLVRPN------PDDPTGK 568 Query: 298 TTQKCDMDRKQLLFRS-TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + + D F S +M + P + YF AD RG+ ++V+ Sbjct: 569 SMMRRVTDVFDCWFESGSMPYAQLHYPFENKELFENYFPADFITEYVAQTRGWFYTLFVL 628 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 + A+ +K N + C V L G K+SKR ++ + + Sbjct: 629 ST--------------ALFDKPPFKNCI-CHGVVLDTQGQ--KLSKRLNNYADPMEIFKQ 671 Query: 417 VGSDSVRFMML 427 GSD++RF+ML Sbjct: 672 YGSDAMRFLML 682 >gi|58417799|emb|CAI27003.1| Isoleucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] Length = 1124 Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 75/191 (39%), Gaps = 33/191 (17%) Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 V +K + DD+KAL DI I DD HR IDNL R P K Sbjct: 524 VYGSIKKVFDDIKALEEDFDIPI--DDLHRP-------YIDNLVRPN------PDDPTGK 568 Query: 298 TTQKCDMDRKQLLFRS-TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + + D F S +M + P + YF AD RG+ ++V+ Sbjct: 569 SMMRRVTDVFDCWFESGSMPYAQLHYPFENKELFENYFPADFITEYVAQTRGWFYTLFVL 628 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 + A+ +K N + C V L G K+SKR ++ + + Sbjct: 629 ST--------------ALFDKPPFKNCI-CHGVVLDTQGQ--KLSKRLNNYADPMEIFKQ 671 Query: 417 VGSDSVRFMML 427 GSD++RF+ML Sbjct: 672 YGSDAMRFLML 682 >gi|330836491|ref|YP_004411132.1| Isoleucyl-tRNA synthetase [Spirochaeta coccoides DSM 17374] gi|329748394|gb|AEC01750.1| Isoleucyl-tRNA synthetase [Spirochaeta coccoides DSM 17374] Length = 1044 Score = 37.4 bits (85), Expect = 6.4, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 11/119 (9%) Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCE 387 G Y + YF+ + F N G D + G+ L +AAA+ EK A +N ++ Sbjct: 532 GELHYPFENKEYFETHFPADFINE----GLDQTRGWFYTLTIIAAALFEKPAFLNCIVNG 587 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446 ++ L DG KMSK ++ +V + G+D++RF ++ NS + D K E S Sbjct: 588 II-LAADGK--KMSKSEHNYTDPMEIVKQYGADALRFSLM---NSNVTHADDLKFSEDS 640 >gi|302800117|ref|XP_002981816.1| hypothetical protein SELMODRAFT_421269 [Selaginella moellendorffii] gi|300150258|gb|EFJ16909.1| hypothetical protein SELMODRAFT_421269 [Selaginella moellendorffii] Length = 855 Score = 37.4 bits (85), Expect = 6.5, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 54/136 (39%), Gaps = 22/136 (16%) Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF---DTSELQLIVHLA 503 K N Y+ YAYAR SI R++ + I Q E E L +HL Sbjct: 733 KGNTAVYLFYAYARVCSIIRKSGRSIDE----------IKQTCELVVEHPHERSLRLHLI 782 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 ++ +E++ P L YLY L+ +F ++ + L+ RL L Sbjct: 783 QFTETVEDSISRLLPSTLCDYLYTLSELFTQFYTSCKVTRSLQEAS---------RLLLC 833 Query: 564 HAVASIINSGLNIIGV 579 A I GL ++G+ Sbjct: 834 EATRLITKQGLELLGL 849 >gi|91782599|ref|YP_557805.1| ketol-acid reductoisomerase [Burkholderia xenovorans LB400] gi|296160616|ref|ZP_06843431.1| ketol-acid reductoisomerase [Burkholderia sp. Ch1-1] gi|116248122|sp|Q142I6|ILVC_BURXL RecName: Full=Ketol-acid reductoisomerase; AltName: Full=Acetohydroxy-acid isomeroreductase; AltName: Full=Alpha-keto-beta-hydroxylacil reductoisomerase gi|91686553|gb|ABE29753.1| ketol-acid reductoisomerase [Burkholderia xenovorans LB400] gi|295889142|gb|EFG68945.1| ketol-acid reductoisomerase [Burkholderia sp. Ch1-1] Length = 338 Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust. Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 24/122 (19%) Query: 334 FAADLAYFKCK----------YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383 +A ++AYF+C YE G NM Y + S+++ Y + + +E K + Sbjct: 218 YAPEMAYFECLHELKLIVDLIYEGGIANMNYSI-SNNAEYGEYVTGPRIVTAETKKAMKA 276 Query: 384 LLCEL---------VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSEL 434 +L ++ + + G P S+R +T H +++VGS +R MM W ++L Sbjct: 277 VLTDIQTGEYAKSFILENKAGAPTLQSRRR---LTAEHQIEQVGS-KLRAMMPWIAKNKL 332 Query: 435 LD 436 +D Sbjct: 333 VD 334 >gi|332296159|ref|YP_004438082.1| Valyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796] gi|332179262|gb|AEE14951.1| Valyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796] Length = 875 Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 12/127 (9%) Query: 332 TYFAADLAYFKC--------KYERGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQIN 382 T+F++ L F + ++ F + V G D +V R+ ++ A++ K+ N Sbjct: 449 TWFSSSLWPFSTMGWPDNTPELKKFFPTSVLVTGFDIIYFWVARMIMMSIALTGKEPFKN 508 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 V++ LVR D KMSK G+ I +++E G+D++RF + N D K Sbjct: 509 VIIHGLVR---DSQGRKMSKSVGNVIDPMDIIEESGADALRFSLASLSNPAGQDIKMSKE 565 Query: 443 KEQSKEN 449 K + N Sbjct: 566 KVKGARN 572 >gi|251781887|ref|YP_002996189.1| methionyl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390516|dbj|BAH80975.1| methionyl-tRNA synthetase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 666 Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust. Identities = 29/131 (22%), Positives = 55/131 (41%), Gaps = 23/131 (17%) Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 P+G +H+G + D LA G+EV +++ G +I T A Sbjct: 15 PSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAAEA---------- 64 Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251 G P Y+ ++ K++ D + +LL+ +K++ DY + + + + Sbjct: 65 -------GISPQTYVDNMAKDVKDLW--QLLDISYDKFIRTTDDYHEEVVAAV----FEK 111 Query: 252 LNIQHDIFISE 262 L Q DI++ E Sbjct: 112 LLAQDDIYLGE 122 >gi|322411230|gb|EFY02138.1| methionyl-tRNA synthetase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 665 Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust. Identities = 29/131 (22%), Positives = 55/131 (41%), Gaps = 23/131 (17%) Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYN 191 P+G +H+G + D LA G+EV +++ G +I T A Sbjct: 14 PSGKLHIGSAYTTIACDVLARYKRLMGHEVFYLTGLDEHGQKIQTKAAEA---------- 63 Query: 192 NDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKA 251 G P Y+ ++ K++ D + +LL+ +K++ DY + + + + Sbjct: 64 -------GISPQTYVDNMAKDVKDLW--QLLDISYDKFIRTTDDYHEEVVAAV----FEK 110 Query: 252 LNIQHDIFISE 262 L Q DI++ E Sbjct: 111 LLAQDDIYLGE 121 >gi|291522237|emb|CBK80530.1| Protein of unknown function (DUF3048) [Coprococcus catus GD/7] Length = 363 Score = 37.0 bits (84), Expect = 8.2, Method: Compositional matrix adjust. Identities = 27/104 (25%), Positives = 42/104 (40%), Gaps = 3/104 (2%) Query: 125 IEFVSANPTGPMHVGHCRCA---VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 I+F + N +H G + A + D + ++ SGYE Y +D A N Sbjct: 142 IDFANDNDAIYVHYGQSKYALSRIEDDNIMTIHGLSGYESKVFYRSSDRKAPHNVYTTGK 201 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP 225 + D P GY P + HV EL D +++ +N P Sbjct: 202 MLAEGLEVTGLTRDYPAGYTPRLQFNHVDTELKDGINAQKVNIP 245 >gi|330444673|ref|YP_004377659.1| Isoleucyl-tRNA synthetase [Chlamydophila pecorum E58] gi|328807783|gb|AEB41956.1| Isoleucyl-tRNA synthetase [Chlamydophila pecorum E58] Length = 1066 Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 4/84 (4%) Query: 345 YERGFDNMIYVMGSDHS-GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403 +E F G D + G+ L +AAA+ ++ A NV++ ++ L DG KMSKR Sbjct: 543 FENAFPADFISEGLDQTRGWFYTLTVIAAALFDRPAFRNVIVNGII-LAEDGN--KMSKR 599 Query: 404 AGDFITLRHVVDEVGSDSVRFMML 427 ++ + + ++D G+D++R +L Sbjct: 600 LNNYPSPKSILDSYGADALRLYLL 623 >gi|254455929|ref|ZP_05069358.1| leucyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211] gi|207082931|gb|EDZ60357.1| leucyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211] Length = 845 Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust. Identities = 54/242 (22%), Positives = 90/242 (37%), Gaps = 61/242 (25%) Query: 132 PTGPMHVGHCRCAVVGDTLASLMAFSGYEVTR--------------------------EY 165 P+G +H+GH R +GD LA + GY V E Sbjct: 43 PSGKIHMGHVRNYTIGDVLARYKSLQGYNVLHPMGWDSFGMPAENAARQNNLSPKDWTES 102 Query: 166 YINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFP 225 I++ +Q+ L LS+ W + + + D Y KH + + Y L+ Sbjct: 103 NISNMKSQLKRLGLSIDWDREISTCSVD-----------YYKHQQEFFLELYDKGLVYRK 151 Query: 226 EE--KWLPIVKDYSVQAMMKII---------RDDLKALN--------IQHDIFISEDDFH 266 E+ W P+ D +V A ++I + + K LN +++ S D Sbjct: 152 EQDVNWDPV--DQTVLANEQVIDGKGWRSGAQVERKKLNQWFFNITKFSNELLESLDTLD 209 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ--KCDMDRKQLLFRSTMVGDDVDRPL 324 + P+ ++ + N + + E P SK + KC R LF + + VD PL Sbjct: 210 QW-PNKVKIMQKNWIGKSFGCEVKFPISSSKDVREIKCFTTRPDTLFGLSFLALSVDHPL 268 Query: 325 LK 326 K Sbjct: 269 SK 270 >gi|329118886|ref|ZP_08247581.1| ketol-acid reductoisomerase [Neisseria bacilliformis ATCC BAA-1200] gi|327464914|gb|EGF11204.1| ketol-acid reductoisomerase [Neisseria bacilliformis ATCC BAA-1200] Length = 337 Score = 37.0 bits (84), Expect = 8.7, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 16/120 (13%) Query: 334 FAADLAYFKCK----------YERGFDNMIYVMG--SDHSGYVKRLEAVAAAVSE--KKA 379 +A ++AYF+C YE G NM Y + +++ YV +E + + E + A Sbjct: 217 YAPEMAYFECLHEMKLIVDLIYEGGIANMNYSISNNAEYGEYVTGVEVINSQSREAMRNA 276 Query: 380 QINVLLCELVRLY-RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438 + E +++ ++G S A +T H +++VG+ +R MM W ++L+D D Sbjct: 277 LKRIQTGEYAKMFIQEGASNYPSMTARRRLTADHQIEQVGA-KLRGMMPWIAKNKLVDLD 335 >gi|14521127|ref|NP_126602.1| isoleucyl-tRNA synthetase [Pyrococcus abyssi GE5] gi|11135009|sp|Q9V072|SYI_PYRAB RecName: Full=Isoleucyl-tRNA synthetase; AltName: Full=Isoleucine--tRNA ligase; Short=IleRS gi|5458344|emb|CAB49833.1| ileS isoleucyl-tRNA synthetase [Pyrococcus abyssi GE5] Length = 1067 Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust. Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 14/116 (12%) Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS-ELLDFDFCKVKEQSKENPVFYVQYA 457 KMSK G+ I VV+ G D+ RF MLW N E L F + V++ + + + Y Sbjct: 625 KMSKSLGNIIRPEEVVERAGRDTFRFYMLWATNPWENLKFSWKGVEQVRRMLNILWNVYV 684 Query: 458 YARCRSIFRQAKDIFPDLD-FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 A + LD FD PR + P E F + ++ + +EN Sbjct: 685 LAST----------YMSLDNFD--PRKLNPDELPFREEDKWILSRVNSLISEVENG 728 >gi|295098865|emb|CBK87954.1| valyl-tRNA synthetase [Eubacterium cylindroides T2-87] Length = 757 Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 8/133 (6%) Query: 347 RGFDNMIYVMGSDH-SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405 R F N + V G D +V R+ + + +VL+ LVR D KMSK G Sbjct: 471 RYFPNDVLVTGYDIIFFWVARMAFQTRYCMKNRPFKDVLIHGLVR---DSQGRKMSKSLG 527 Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 + I V++ G+D++RF + ++ LD F + K +S N ++ + R + Sbjct: 528 NGIDPMDVIENHGADALRFFLT-TNSTPGLDLRFDEKKMESSWN---FINKIWNAARYVQ 583 Query: 466 RQAKDIFPDLDFD 478 Q D P LD D Sbjct: 584 MQIGDTKPTLDVD 596 Searching..................................................done Results from round 2 >gi|254780285|ref|YP_003064698.1| arginyl-tRNA synthetase [Candidatus Liberibacter asiaticus str. psy62] gi|254039962|gb|ACT56758.1| arginyl-tRNA synthetase [Candidatus Liberibacter asiaticus str. psy62] Length = 586 Score = 813 bits (2101), Expect = 0.0, Method: Composition-based stats. Identities = 586/586 (100%), Positives = 586/586 (100%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD Sbjct: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG Sbjct: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS Sbjct: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA Sbjct: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ Sbjct: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH Sbjct: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD Sbjct: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF Sbjct: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR Sbjct: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS Sbjct: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586 >gi|315122845|ref|YP_004063334.1| arginyl-tRNA synthetase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496247|gb|ADR52846.1| arginyl-tRNA synthetase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 586 Score = 719 bits (1857), Expect = 0.0, Method: Composition-based stats. Identities = 464/586 (79%), Positives = 531/586 (90%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M+LF DFSSR+ NY+K+ID + +EKK LD IV+ERPR+ HGHLSTNAAMILSRPL LD Sbjct: 1 MHLFTDFSSRMINYIKDIDFEKNIEKKYLDCIVVERPRNIMHGHLSTNAAMILSRPLSLD 60 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P+TIAELI+ARIK+DPDVD V I GKGFINLYLSPSYL KILS IVVSGIEYGR+LIGKG Sbjct: 61 PITIAELIIARIKMDPDVDFVSIGGKGFINLYLSPSYLSKILSFIVVSGIEYGRSLIGKG 120 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KVN+E+VSANPTGPMHVGHCRCAVVGD LA+LM FSGYEVTREYYINDAGAQI+TLA S Sbjct: 121 RKVNVEYVSANPTGPMHVGHCRCAVVGDVLANLMEFSGYEVTREYYINDAGAQIDTLAHS 180 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 VF RYQQ L NND DLPEG+YPG YLK +GKEL DKY SELLNF EEKWLPIV+DY+V+A Sbjct: 181 VFLRYQQVLDNNDFDLPEGFYPGAYLKAIGKELVDKYGSELLNFYEEKWLPIVRDYAVKA 240 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM+II+DDLKALNI+HD+F+SE +FHRGD SPIRDII ++ R+GY+YEG+LP PK+K + Sbjct: 241 MMEIIKDDLKALNIRHDVFVSEKNFHRGDHSPIRDIIGDMGRKGYIYEGVLPAPKAKKNK 300 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 D++ +Q+LFRSTMVGDD+DRPL KSDGSYTYFAADLAYFK KYERGFD M+YVMGSDH Sbjct: 301 TFDINCEQILFRSTMVGDDIDRPLFKSDGSYTYFAADLAYFKYKYERGFDQMVYVMGSDH 360 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 SGYVKRLEAVA+AV+ +K+++NVLLCELVRLYRDGMPIKMSKRAGDFITLR+VVDEVG D Sbjct: 361 SGYVKRLEAVASAVAGEKSKVNVLLCELVRLYRDGMPIKMSKRAGDFITLRYVVDEVGCD 420 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD FPD+DFDLF Sbjct: 421 PVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDFFPDIDFDLF 480 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 P+ + Q+ +D +ELQL++HL EYPR++ENATI QEPY+LAFYL+DLASVFH HWSHGR Sbjct: 481 PQKALSQDFAWDIAELQLVMHLLEYPRIVENATIFQEPYRLAFYLHDLASVFHSHWSHGR 540 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586 ENPRL+F+Q +NR+LT+MRLQLV+AVAS+INSGLNIIGVESP+EMS Sbjct: 541 ENPRLKFIQEDNRELTIMRLQLVYAVASVINSGLNIIGVESPHEMS 586 >gi|227821928|ref|YP_002825898.1| arginyl-tRNA synthetase [Sinorhizobium fredii NGR234] gi|227340927|gb|ACP25145.1| arginyl-tRNA synthetase [Sinorhizobium fredii NGR234] Length = 589 Score = 701 bits (1810), Expect = 0.0, Method: Composition-based stats. Identities = 340/586 (58%), Positives = 446/586 (76%), Gaps = 2/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF DF SR+KN L+ +D + + R+ IE PRD +HG ++TNAAM+L++ LG Sbjct: 4 MNLFTDFESRIKNILESLDIVREKRSDVDFGRVSIEPPRDPSHGDVATNAAMVLAKSLGT 63 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A+LIV +++ DP+V V +AG GFIN+ LS SY +K+LS++V +G ++GR+ +G Sbjct: 64 NPRALADLIVDKLRQDPEVAEVSVAGPGFINVRLSVSYWQKLLSAMVSAGTDFGRSTVGA 123 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY+V +EYYINDAG+QI+ LA Sbjct: 124 GRKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYDVAKEYYINDAGSQIDVLAR 183 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY+QAL ++P G YPG YL VG+ LAD++ + L PE+KW+P+VK+ + Sbjct: 184 SAFLRYRQALGEEIGEIPAGLYPGDYLVPVGEALADEFGTSLRIMPEDKWMPLVKERVID 243 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL ALN+ HD+F SE H + IR I++L +G+VY G LPPPK + Sbjct: 244 AMMAMIREDLAALNVNHDVFFSERTLHDNGAARIRTAINDLTFKGHVYIGTLPPPKGQLP 303 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGF MIYV+G+D Sbjct: 304 EDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKDKFDRGFQEMIYVLGAD 362 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEA+A A+SE A++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VVDEVG Sbjct: 363 HGGYVKRLEALARAISEGTAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVDEVGR 422 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQAK+ FPDLD Sbjct: 423 DPVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCCSVFRQAKEAFPDLDLSS 482 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + D +ELQL+ LAEYPRV+E A ++QEP+++AFYLYDLA+ FH W+ G Sbjct: 483 VDLAGAVIGAIVDPAELQLVAKLAEYPRVVEAAALSQEPHRIAFYLYDLAAAFHALWNKG 542 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +ENP LRFV NR+L++ RL LVHAVAS++ SGL++ G +P EM Sbjct: 543 KENPELRFVNDKNRELSIARLGLVHAVASVLKSGLSVTGTSAPEEM 588 >gi|222085780|ref|YP_002544310.1| arginyl-tRNA synthetase [Agrobacterium radiobacter K84] gi|254782936|sp|B9JEG3|SYR_AGRRK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|221723228|gb|ACM26384.1| arginyl-tRNA synthetase [Agrobacterium radiobacter K84] Length = 586 Score = 697 bits (1799), Expect = 0.0, Method: Composition-based stats. Identities = 339/586 (57%), Positives = 450/586 (76%), Gaps = 2/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF DF R+KN L++ID + ++ RI +E PRD +HG ++TNAAM+LS+PLG+ Sbjct: 1 MNLFTDFEVRIKNALEQIDIVREKRSELDFGRIGVEPPRDASHGDVATNAAMVLSKPLGM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +AE+I+A+++ D DV V AG GFIN+ LS Y +++L++++ G ++GR+ +G Sbjct: 61 NPRALAEIIIAKLQEDADVADVSAAGPGFINIRLSVGYWQRLLATMISEGEKFGRSTVGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+VT+EYYINDAG+QI+ LA Sbjct: 121 GQKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLGFAGYDVTKEYYINDAGSQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SVF RY++AL ++P G YPG YL VG+ LA ++ ++L PEE+WLPI+++ ++ Sbjct: 181 SVFIRYREALGEQVGEIPAGLYPGDYLVPVGESLAKEFGTKLRGMPEEQWLPIIRERAID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL+ALN+ HD+F SE H + IR I++L +GYVY+G LPPPK + Sbjct: 241 AMMVMIRADLEALNVHHDVFFSERTLHANGAALIRTAINDLTFKGYVYKGALPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGF+ MIY++G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKNKFDRGFNEMIYILGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA VSE KA++ VLLC+LV+L+R+G P+KMSKR+GDF+TLR VVDEVG Sbjct: 360 HGGYVKRLEAVARGVSEGKAKLTVLLCQLVKLFRNGEPVKMSKRSGDFVTLREVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 DSVRFMML+RK+SE LDFDF KV EQSK+NPVFYVQYA+ARC SIFRQA++ FPDLD Sbjct: 420 DSVRFMMLYRKSSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSIFRQAQEAFPDLDIAS 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 D +ELQL+ +AE+PR+IE A AQEP+++AFYLYDLAS FHGHW+ G Sbjct: 480 LDLAKAVGGVISDPAELQLVAKIAEFPRIIEAAAQAQEPHRIAFYLYDLASSFHGHWNKG 539 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ P LRFV NR+L++ RL LVHAVAS++ SGL I G +P+EM Sbjct: 540 KDLPELRFVNDKNRELSIARLGLVHAVASVLKSGLGITGTAAPDEM 585 >gi|116251801|ref|YP_767639.1| arginyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841] gi|115256449|emb|CAK07533.1| putative arginyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841] Length = 585 Score = 691 bits (1783), Expect = 0.0, Method: Composition-based stats. Identities = 337/586 (57%), Positives = 447/586 (76%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF DF +R+K L++ID + ++ RI +E PRD +HG ++TNAAM+L++PLG Sbjct: 1 MNLFTDFEARIKTALEQIDLVREKRSELDFGRITVEPPRDASHGDVATNAAMVLAKPLGT 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A++I+A++K D DV V +AG GFIN+ L+ Y +++L+S++ +G +YGR+ +G+ Sbjct: 61 NPRALADVIIAKLKEDADVADVSVAGPGFINIRLAVGYWQRLLASMIGAGTDYGRSTLGE 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ LA Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SVF RY++AL ++P G YPG YL VG+ LA Y L N PE++W+PIVKD ++ Sbjct: 181 SVFLRYREALGEKIGEIPSGLYPGDYLVPVGQSLAADYGVRLHNMPEDQWMPIVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL ALN+ HD+F SE H + IR I++L +GYVY+G LPPPK + Sbjct: 241 AMMVMIREDLAALNVHHDVFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKNKFDRGFDEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA VS+ KA++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG Sbjct: 360 HGGYVKRLEAVARGVSDGKAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 DSVRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA++ FPDLD Sbjct: 420 DSVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSVFRQAREAFPDLDVSP 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 D +ELQL+ LAE+PR++E A +QEP+++AFYLYD+AS FH HW+ G Sbjct: 480 ENL-AKTVAGIGDPAELQLVAKLAEFPRIVEAAAQSQEPHRVAFYLYDVASSFHAHWNKG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ P LRFV NR+ ++ RL LV+AVAS++ SGL I G +P+EM Sbjct: 539 KDQPELRFVNDKNRESSIARLGLVYAVASVLKSGLAITGTAAPDEM 584 >gi|325293096|ref|YP_004278960.1| Arginyl-tRNA synthetase [Agrobacterium sp. H13-3] gi|325060949|gb|ADY64640.1| Arginyl-tRNA synthetase [Agrobacterium sp. H13-3] Length = 585 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 346/586 (59%), Positives = 456/586 (77%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF +R+KN L+ +D + +K+ RI +E PRD +HG ++TNAAM+L++PLG Sbjct: 1 MNIFADFDTRIKNALETLDLVKENREKVDFSRITVESPRDLSHGDVATNAAMVLAKPLGT 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +AELIV ++ D DVDSV +AG GFINL +S Y +++L+ ++ GI++GR+ IG Sbjct: 61 NPRALAELIVPALQADGDVDSVNVAGPGFINLKVSVGYWQRLLAYMIGQGIDFGRSKIGT 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G K+N+E+VSANPTGPMHVGHCR AVVGDTLA+L+AF+GY VT+EYYINDAG+QI+ LA Sbjct: 121 GQKINVEYVSANPTGPMHVGHCRGAVVGDTLANLLAFAGYGVTKEYYINDAGSQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SVF RY++AL + +P G+YPG YL VG+ LAD+Y +L PEEKWLPIVKD ++ Sbjct: 181 SVFLRYREALGEDIGAIPSGFYPGDYLVPVGQALADEYGIKLRAMPEEKWLPIVKDKAIA 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL+ LN++HD+F SE H G+ PI I++L +G+VY+G LPPPK + Sbjct: 241 AMMVMIREDLETLNVKHDVFFSERTLHEGNGGPILSAINDLTFKGHVYKGTLPPPKGELP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DR L+KSDGSYTYFAAD+AYFK K++RGF MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDMDRALMKSDGSYTYFAADVAYFKNKFDRGFSEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVSE K+++ VLLC+LV+LYRDG P+KMSKR+GDF+TLR VVDEVG Sbjct: 360 HGGYVKRLEAVARAVSEGKSKLTVLLCQLVKLYRDGEPVKMSKRSGDFVTLRDVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC SIFRQA++ FP L Sbjct: 420 DPVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSIFRQAQEAFPGLALSQ 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + D +ELQL+ LAEYPR+IE+A +A EP++LAFYLYDLAS FHGHW+ G Sbjct: 480 DDMS-SSVALISDINELQLVAKLAEYPRLIESAALAHEPHRLAFYLYDLASSFHGHWNKG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++ LRF+ NR+L++ RL LV+AVA+++ SGL ++G ++P+EM Sbjct: 539 KDHQELRFINDKNRELSIARLGLVNAVANVLKSGLTLLGADAPDEM 584 >gi|86357446|ref|YP_469338.1| arginyl-tRNA synthetase [Rhizobium etli CFN 42] gi|109895025|sp|Q2K975|SYR_RHIEC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|86281548|gb|ABC90611.1| arginyl-tRNA synthetase (Arginine--tRNA ligase) protein [Rhizobium etli CFN 42] Length = 585 Score = 688 bits (1777), Expect = 0.0, Method: Composition-based stats. Identities = 342/586 (58%), Positives = 447/586 (76%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF DF +R+K L++ID + ++ RI +E PRD +HG ++TNAAM+L++PLG Sbjct: 1 MNLFTDFEARIKTALEQIDLVREKRSELDFGRIAVEPPRDASHGDVATNAAMVLAKPLGT 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A++I+A++K D DV V +AG GFIN+ L+ Y +++L+SI+ +GI+YGR+ +G+ Sbjct: 61 NPRALADVIIAKLKEDADVADVSVAGPGFINIRLAVGYWQRLLASIIGAGIDYGRSSLGE 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G VN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ LA Sbjct: 121 GRTVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SVF RY++AL ++P G YPG YL VG+ LA Y L N PEE+W+PIVKD ++ Sbjct: 181 SVFLRYREALGERIGEIPSGLYPGDYLVPVGQSLAADYGVRLHNMPEEEWMPIVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL ALN+ HDIF SE H + IR I++L +GYVY+G LPPPK + Sbjct: 241 AMMAMIREDLAALNVHHDIFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGF+ MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKNKFDRGFEEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA VS+ KA++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG Sbjct: 360 HGGYVKRLEAVARGVSDGKAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 DSVRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQAK+ F LD Sbjct: 420 DSVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSVFRQAKEAFAGLDVSP 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 E D +ELQL+ LAE+PR+IE+A +QEP+++AFYLYDLAS FH HW+ G Sbjct: 480 EDLAKAVAGIE-DPAELQLVAKLAEFPRIIESAAQSQEPHRIAFYLYDLASAFHAHWNKG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ P LRFV NR+ T+ RL LV+AVAS++ SGL I G +P+EM Sbjct: 539 KDQPELRFVNDKNRESTIARLGLVYAVASVLKSGLAITGTAAPDEM 584 >gi|15889018|ref|NP_354699.1| arginyl-tRNA synthetase [Agrobacterium tumefaciens str. C58] gi|23822194|sp|Q8UEP4|SYR_AGRT5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|15156807|gb|AAK87484.1| arginyl-tRNA synthetase [Agrobacterium tumefaciens str. C58] Length = 585 Score = 688 bits (1777), Expect = 0.0, Method: Composition-based stats. Identities = 339/586 (57%), Positives = 451/586 (76%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF +R+KN L+ +D + +K+ RI +E PRD +HG ++TNAAM+L++PLG Sbjct: 1 MNIFADFDTRIKNALETLDLVKENREKVDFSRITVESPRDLSHGDVATNAAMVLAKPLGT 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +AEL+V ++ D DVD V +AG GFINL +S Y +++L+ ++ G+++GR+ +G Sbjct: 61 NPRALAELLVPALQADGDVDGVNVAGPGFINLKVSVGYWQRLLADMIGQGVDFGRSTVGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G K+N+E+VSANPTGPMHVGHCR AVVGDTLA+L+AF+GY VT+EYYINDAG+QI+ LA Sbjct: 121 GQKINVEYVSANPTGPMHVGHCRGAVVGDTLANLLAFAGYGVTKEYYINDAGSQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SVF RY++AL + +P G YPG YL VG+ LAD+Y +L PEEKWLPIVKD ++ Sbjct: 181 SVFLRYREALGEDIGSIPSGLYPGDYLVPVGQALADEYGIKLRAMPEEKWLPIVKDKAID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL LN++HD+F SE H G+ PI I++L +G+VY+G LPPPK + Sbjct: 241 AMMVMIREDLALLNVRHDVFFSERTLHEGNGGPILSAINDLTFKGHVYKGTLPPPKGELP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + DR+Q LFRST VGDD+DR L+KSDGSYTYFAAD+AYFK K++RGF MIYV+G+D Sbjct: 301 DDWE-DREQTLFRSTEVGDDMDRALMKSDGSYTYFAADVAYFKNKFDRGFSEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVSE K+++ VLLC+LV+L+RDG P+KMSKR+GDF+TLR VVDEVG Sbjct: 360 HGGYVKRLEAVARAVSEGKSKLTVLLCQLVKLFRDGEPVKMSKRSGDFVTLRDVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC+SIFRQA++ FP L Sbjct: 420 DPVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCKSIFRQAQEAFPGLAPSA 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 D +ELQL+ LAEYPR+IE+A ++ EP++LAFYLYDLA FHGHW+ G Sbjct: 480 EDMAA-SVALISDINELQLVAKLAEYPRLIESAALSHEPHRLAFYLYDLAGSFHGHWNKG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++ LRF+ NR+L++ RL LV+AVA+++ SGL ++G ++P+EM Sbjct: 539 KDHQELRFINDKNRELSIARLGLVNAVANVLKSGLTLLGADAPDEM 584 >gi|327191799|gb|EGE58799.1| arginyl-tRNA synthetase protein [Rhizobium etli CNPAF512] Length = 585 Score = 688 bits (1777), Expect = 0.0, Method: Composition-based stats. Identities = 340/586 (58%), Positives = 443/586 (75%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF DF +R+K L++ID + ++ RI +E PRD +HG ++TNAAM+L++PLG Sbjct: 1 MNLFTDFEARIKTALEQIDLVREKRSELDFGRITVEPPRDASHGDVATNAAMVLAKPLGS 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A++I+A++K D DV V +AG GFIN+ LS Y +++L+S++ SG +YGR+ +G Sbjct: 61 NPRALADVIIAKLKEDADVADVSVAGPGFINIRLSVGYWQRLLASMIASGTDYGRSTLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ LA Sbjct: 121 GRKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SVF RY++AL ++P G YPG YL VG+ LA Y L N PEE+W+PIVKD ++ Sbjct: 181 SVFLRYREALGERIGEIPSGLYPGDYLVPVGQSLAADYGVRLHNMPEEQWMPIVKDRTIS 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL ALN+ HDIF SE H + IR I++L +GYVY+G LPPPK + Sbjct: 241 AMMVMIREDLAALNVHHDIFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDMDRPLIKSDGSYTYFAADVAYFKNKFDRGFDEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA VS+ KA++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG Sbjct: 360 HGGYVKRLEAVARGVSDGKAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 DSVRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA++ FP L Sbjct: 420 DSVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSVFRQAREAFPGLAVSA 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 D +ELQL+ LAE+PRV+E A +QEP+++AFYLYDLAS FH HW+ G Sbjct: 480 EDL-AKAVAGIGDPAELQLVAKLAEFPRVVEAAAQSQEPHRIAFYLYDLASSFHAHWNKG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ LRFV NR+ ++ RL LV+AVAS++ SGL I G +P+EM Sbjct: 539 KDQTELRFVNDKNRESSIARLGLVYAVASVLKSGLAITGTAAPDEM 584 >gi|190891507|ref|YP_001978049.1| arginyl-tRNA synthetase [Rhizobium etli CIAT 652] gi|238692531|sp|B3PXT5|SYR_RHIE6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|190696786|gb|ACE90871.1| arginyl-tRNA synthetase protein [Rhizobium etli CIAT 652] Length = 585 Score = 688 bits (1777), Expect = 0.0, Method: Composition-based stats. Identities = 340/586 (58%), Positives = 443/586 (75%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF DF +R+K L++ID + ++ RI +E PRD +HG ++TNAAM+L++PLG Sbjct: 1 MNLFTDFEARIKTALEQIDLVREKRSELDFGRITVEPPRDASHGDVATNAAMVLAKPLGS 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A++I+A++K D DV V +AG GFIN+ LS Y +++L+S++ SG +YGR+ +G Sbjct: 61 NPRALADVIIAKLKEDADVADVSVAGPGFINIRLSVGYWQRLLASMINSGTDYGRSTLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ LA Sbjct: 121 GRKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SVF RY++AL ++P G YPG YL VG+ LA Y L N PEE+W+PIVKD ++ Sbjct: 181 SVFLRYREALGERIGEIPSGLYPGDYLVPVGQSLAADYGVRLHNMPEEQWMPIVKDRTIS 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL ALN+ HDIF SE H + IR I++L +GYVY+G LPPPK + Sbjct: 241 AMMVMIREDLAALNVHHDIFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDMDRPLIKSDGSYTYFAADVAYFKNKFDRGFDEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA VS KA++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG Sbjct: 360 HGGYVKRLEAVARGVSNGKAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 DSVRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA++ FP L+ Sbjct: 420 DSVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSVFRQAREAFPGLEVSA 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 D +ELQL+ LAE+PRV+E A +QEP+++AFYLYDLAS FH HW+ G Sbjct: 480 EDL-AKAVAGIGDPAELQLVAKLAEFPRVVEAAAQSQEPHRIAFYLYDLASSFHAHWNKG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ LRFV NR+ ++ RL LV+AVAS++ SGL I G +P+EM Sbjct: 539 KDQTELRFVNDKNRESSIARLGLVYAVASVLKSGLAITGTAAPDEM 584 >gi|15965276|ref|NP_385629.1| arginyl-tRNA synthetase [Sinorhizobium meliloti 1021] gi|307309299|ref|ZP_07588967.1| arginyl-tRNA synthetase [Sinorhizobium meliloti BL225C] gi|23822199|sp|Q92Q31|SYR_RHIME RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|15074456|emb|CAC46102.1| Probable arginyl-tRNA synthetase (arginine--tRNA ligase) [Sinorhizobium meliloti 1021] gi|306900300|gb|EFN30917.1| arginyl-tRNA synthetase [Sinorhizobium meliloti BL225C] Length = 585 Score = 688 bits (1777), Expect = 0.0, Method: Composition-based stats. Identities = 340/586 (58%), Positives = 450/586 (76%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDC-KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF DF +R+ L+ I+ + K + RI +E PRD +HG ++TNAAM+L++PLG+ Sbjct: 1 MNLFTDFEARINRILESIEIIREKRSELDFGRINVEPPRDASHGDVATNAAMVLAKPLGM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A+LIV ++ DP+V V +AG GFIN+ LS SY +K+L++I +G++YGR+ G Sbjct: 61 NPRALADLIVDKLGQDPEVAGVSVAGPGFINVRLSVSYWQKLLAAITRAGVDYGRSTFGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G K+N+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY+VT+EYYINDAG+QI LA Sbjct: 121 GRKINVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYDVTKEYYINDAGSQIEVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY+QAL + +++P G YPG YL VG+ LAD+Y + L PE+KW+P+VK+ + Sbjct: 181 SAFLRYRQALGEDIAEIPAGLYPGDYLVPVGEALADEYGTSLRIMPEDKWVPLVKERVID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL ALN+ HD+F SE H + IR I++L +G+VY+G LPPPK + Sbjct: 241 AMMAMIREDLAALNVNHDVFFSERALHDNGAARIRTAINDLTFKGHVYKGTLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGF MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKDKFDRGFHEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEA+A A+S A++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VVDEVG Sbjct: 360 HGGYVKRLEALARAISGGTAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RK+SE LDFDF KV EQSK+NPVFYVQYA+ARCRS+FRQA + FPDLD Sbjct: 420 DPVRFMMLYRKSSEPLDFDFAKVTEQSKDNPVFYVQYAHARCRSVFRQAAEAFPDLDLSS 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + D +E+QL+ LAEYPRV+E A ++ EP+++AFYLYDLA+VFHGHW+ G Sbjct: 480 VDFAAA-AGAIVDPTEMQLVAKLAEYPRVVEAAALSHEPHRIAFYLYDLAAVFHGHWNKG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +ENP LRFV NR+L++ RL LVHAVAS++ SGL+I G +P+EM Sbjct: 539 KENPELRFVNDKNRELSIARLGLVHAVASVLKSGLSITGTSAPDEM 584 >gi|222148975|ref|YP_002549932.1| arginyl-tRNA synthetase [Agrobacterium vitis S4] gi|254782937|sp|B9JXE6|SYR_AGRVS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|221735961|gb|ACM36924.1| arginyl-tRNA synthetase [Agrobacterium vitis S4] Length = 585 Score = 688 bits (1777), Expect = 0.0, Method: Composition-based stats. Identities = 342/586 (58%), Positives = 443/586 (75%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEID-CKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFADF +R+K L+ +D K K + DRIV+E PRD +HG +TNAAM+L++PLG+ Sbjct: 1 MNLFADFENRIKTALETLDLVKEKRSELSFDRIVVEPPRDASHGDAATNAAMVLAKPLGV 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +A+LI ++K D D+ V +AG GF+N+ LS +Y +++L++++ G ++GR+ G Sbjct: 61 SPRVLADLIGEKLKEDADIAEVSVAGPGFLNIRLSVAYWQRLLANVIAGGTDFGRSQTGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY VT+EYYINDAG+QI+ LA Sbjct: 121 GRKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVTKEYYINDAGSQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SVF RY++AL ++P G YPG YL VG+ LA +Y L N PEE+W+ IVKD ++ Sbjct: 181 SVFLRYREALGEAVGEIPAGLYPGDYLIPVGEALAQEYGVRLHNMPEEQWMEIVKDRAID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL ALN+ HD+F SE H + IR I++L +G+VY G LPPPK + Sbjct: 241 AMMVMIREDLAALNVHHDLFYSERQLHANGAAAIRTAINDLTFKGHVYRGTLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK KY+RGFD MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKDKYDRGFDRMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVSE KA++ VLLC+LV+LYRDG P+KMSKR+GDF+TLR VV+EVG Sbjct: 360 HGGYVKRLEAVAKAVSEGKAKLTVLLCQLVKLYRDGEPVKMSKRSGDFVTLRDVVEEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 DSVRFMML+RK+SE LDFDF KV EQSK+NPVFYVQYA+ARC SIFRQA++ F D+D Sbjct: 420 DSVRFMMLYRKSSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSIFRQAREAFGDIDLSP 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + SE+QLI LAEYPR+IE + + EP+++AFYLYDLAS FH HW+ G Sbjct: 480 DVLEAAVT-GITEPSEVQLIAKLAEYPRIIEASAQSMEPHRIAFYLYDLASSFHAHWNKG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ P LRFV NR+ ++ RL LVHAVAS++ SGL I G ++P EM Sbjct: 539 KDQPELRFVNDKNRQSSLARLGLVHAVASVLQSGLAITGTDAPQEM 584 >gi|209549083|ref|YP_002281000.1| arginyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|238065092|sp|B5ZMF2|SYR_RHILW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|209534839|gb|ACI54774.1| arginyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 585 Score = 688 bits (1776), Expect = 0.0, Method: Composition-based stats. Identities = 338/586 (57%), Positives = 447/586 (76%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF DF +R+K L++ID + ++ RI +E PRD +HG ++TNAAM+L++PLG Sbjct: 1 MNLFTDFEARIKTALEQIDLVREKRSELDFGRIAVEPPRDASHGDVATNAAMVLAKPLGT 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A++I+A+++ D DV V +AG GFIN+ L+ Y +++L++++ +G +YGR+ +G+ Sbjct: 61 NPRALADIIIAKLREDADVADVSVAGPGFINIRLAVGYWQRLLAAMIGAGTDYGRSTLGE 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ LA Sbjct: 121 GRKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SVF RY++AL ++P G YPG YL VG+ LA Y L N PE++W+PIVKD ++ Sbjct: 181 SVFLRYREALGEKIGEIPSGLYPGDYLVPVGQSLAADYGVRLHNMPEDQWMPIVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL +LN+ HDIF SE H + IR I++L +GYVY+G LPPPK + Sbjct: 241 AMMVMIREDLASLNVHHDIFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDMDRPLIKSDGSYTYFAADVAYFKNKFDRGFDEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA VS+ KA++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVGS Sbjct: 360 HGGYVKRLEAVARGVSDGKAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVGS 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 DSVRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA++ F DLD Sbjct: 420 DSVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSVFRQAREAFGDLDVS- 478 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 D +ELQL+ LAE+PR++E A +QEP++LAFYLYDLAS FH HW+ G Sbjct: 479 PEEFAQTVAGIGDPAELQLVAKLAEFPRIVEAAAQSQEPHRLAFYLYDLASSFHAHWNKG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ P LRFV NR+ T+ RL LV+AVAS++ SGL I G +P+EM Sbjct: 539 KDQPELRFVNDKNRESTIARLGLVYAVASVLKSGLAITGTAAPDEM 584 >gi|307317040|ref|ZP_07596481.1| arginyl-tRNA synthetase [Sinorhizobium meliloti AK83] gi|306897128|gb|EFN27873.1| arginyl-tRNA synthetase [Sinorhizobium meliloti AK83] Length = 585 Score = 687 bits (1774), Expect = 0.0, Method: Composition-based stats. Identities = 340/586 (58%), Positives = 451/586 (76%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDC-KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF DF +R+ L+ I+ + K + RI +E PRD +HG ++TNAAM+L++PLG+ Sbjct: 1 MNLFTDFEARINRILESIEIIREKRSELDFGRINVEPPRDASHGDVATNAAMVLAKPLGM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A+LIV ++ DP+V V +AG GFIN+ LS SY +K+L++I +G++YGR+ G Sbjct: 61 NPRALADLIVDKLGQDPEVAGVSVAGPGFINVRLSVSYWQKLLAAITRAGVDYGRSTFGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G K+N+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY+VT+EYYINDAG+QI LA Sbjct: 121 GRKINVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYDVTKEYYINDAGSQIEVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY+QAL + +++P G YPG YL VG+ LAD+Y + L PE+KW+P+VK+ + Sbjct: 181 SAFLRYRQALGEDIAEIPAGLYPGDYLVPVGEALADEYGTSLRIMPEDKWVPLVKERVID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL ALN+ HD+F SE H + IR I++L +G+VY+G LPPPK + Sbjct: 241 AMMAMIREDLAALNVNHDVFFSERALHDNGAARIRTAINDLTFKGHVYKGTLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 ++ + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGF MIYV+G+D Sbjct: 301 EEWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKDKFDRGFHEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEA+A A+S A++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VVDEVG Sbjct: 360 HGGYVKRLEALARAISGGTAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLREVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RK+SE LDFDF KV EQSK+NPVFYVQYA+ARCRS+FRQA + FPDLD Sbjct: 420 DPVRFMMLYRKSSEPLDFDFAKVTEQSKDNPVFYVQYAHARCRSVFRQAAEAFPDLDLSS 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + D +E+QL+ LAEYPRV+E A ++ EP+++AFYLYDLA+VFHGHW+ G Sbjct: 480 VDFAAA-AGAIVDPTEMQLVAKLAEYPRVVEAAALSHEPHRIAFYLYDLAAVFHGHWNKG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +ENP LRFV NR+L++ RL LVHAVAS++ SGL+I G +P+EM Sbjct: 539 KENPELRFVNDKNRELSIARLGLVHAVASVLKSGLSITGTSAPDEM 584 >gi|241204410|ref|YP_002975506.1| arginyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858300|gb|ACS55967.1| arginyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 585 Score = 687 bits (1773), Expect = 0.0, Method: Composition-based stats. Identities = 336/586 (57%), Positives = 444/586 (75%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF DF SR+K L++ID + ++ RI +E PRD +HG ++TNAAM+L++ LG Sbjct: 1 MNLFTDFESRIKTALEQIDLVREKRSELDFGRITVEPPRDASHGDVATNAAMVLAKVLGT 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A++I+ ++K D DV V +AG GFIN+ L+ Y +++L+S++ +G +YGR+ +GK Sbjct: 61 NPRALADVIITKLKEDADVADVSVAGPGFINIRLAVGYWQRLLASMIGAGTDYGRSSLGK 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ LA Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SVF RY++AL ++P G YPG YL VG+ LA Y L N PE++W+PIVKD ++ Sbjct: 181 SVFLRYREALGEKIGEIPSGLYPGDYLVPVGQSLAADYGVRLHNMPEDQWMPIVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IRDDL ALN+ HD+F SE H + IR I++L +GYVY+G LPPPK + Sbjct: 241 AMMVMIRDDLAALNVHHDVFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKNKFDRGFDEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA VS+ +A++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG Sbjct: 360 HGGYVKRLEAVARGVSDGQAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 DSVRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA++ F DLD Sbjct: 420 DSVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSVFRQAREAFADLDVSP 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 D +ELQL+ LAE+PR++E A +QEP+++AFYLYD+AS FH HW+ G Sbjct: 480 ENL-AKTVAGIGDPAELQLVAKLAEFPRIVEAAAQSQEPHRVAFYLYDVASSFHAHWNKG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ P LRFV NR+ ++ RL LV+AVAS++ SGL I G +P+EM Sbjct: 539 KDQPELRFVNDKNRESSIARLGLVYAVASVLKSGLAITGTAAPDEM 584 >gi|150396377|ref|YP_001326844.1| arginyl-tRNA synthetase [Sinorhizobium medicae WSM419] gi|166232845|sp|A6U8M9|SYR_SINMW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|150027892|gb|ABR60009.1| arginyl-tRNA synthetase [Sinorhizobium medicae WSM419] Length = 585 Score = 683 bits (1763), Expect = 0.0, Method: Composition-based stats. Identities = 340/586 (58%), Positives = 448/586 (76%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEID-CKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF DF +R+ L+ ID + K + RI +E PRD +HG ++TNAAM+L++PLG+ Sbjct: 1 MNLFTDFEARINRILESIDVIREKRSELDFRRINVEPPRDASHGDVATNAAMVLAKPLGM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A+LI ++ DP+V V +AG GFIN+ LS SY +K+L+ I +G++YGR+ +G Sbjct: 61 NPRALADLIGDKLAQDPEVAEVSVAGPGFINVRLSVSYWQKLLAVITRAGVDYGRSALGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G K+N+E+VSANPTGPMHVGHCR AVVGD LA+L+AFSG++VT+EYYINDAG+QI LA Sbjct: 121 GRKINVEYVSANPTGPMHVGHCRGAVVGDALANLLAFSGFDVTKEYYINDAGSQIEVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY+QAL + ++P G YPG YL G+ LAD+Y + L PE+KW+P+VK+ + Sbjct: 181 SAFLRYRQALGEDIGEIPAGLYPGDYLVPAGEALADEYGTSLRIMPEDKWMPLVKERVID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL ALN+ HD+F SE H + IR I++L +G+VY+G+LPPPK + Sbjct: 241 AMMAMIREDLAALNVNHDVFFSERALHDNGAARIRTAINDLTFKGHVYKGMLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLIKSDGSYTYFAADVAYFKDKFDRGFDEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEA+A A+S A++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VVDEVG Sbjct: 360 HGGYVKRLEALARAISGGSAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLREVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RK+SE LDFDF KV EQSK+NPVFYVQYA+ARCRS+FRQA + FPDLD Sbjct: 420 DPVRFMMLYRKSSEPLDFDFAKVTEQSKDNPVFYVQYAHARCRSVFRQAAEAFPDLDLSS 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + D +E+QL+ LAEYPRV+E A + EP+++AFYLYDLA+VFHGHW+ G Sbjct: 480 IDLAGA-AGAIADPTEMQLVAKLAEYPRVVEAAAFSHEPHRIAFYLYDLAAVFHGHWNKG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +ENP LRFV NR+L++ RL LVHAVAS++ SGL+I G +P+EM Sbjct: 539 KENPALRFVNDKNRELSIARLGLVHAVASVLKSGLSITGTSAPDEM 584 >gi|163759455|ref|ZP_02166540.1| putative arginyl-tRNA synthetase [Hoeflea phototrophica DFL-43] gi|162283052|gb|EDQ33338.1| putative arginyl-tRNA synthetase [Hoeflea phototrophica DFL-43] Length = 586 Score = 680 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 327/586 (55%), Positives = 434/586 (74%), Gaps = 2/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDC-KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F DF R+K ++ +D + K E R+ +E PRD AH +STNAAM+L++PLG+ Sbjct: 1 MNVFKDFEERIKTAVQALDAVREKGEAVDFARLAVEPPRDPAHDDISTNAAMVLAKPLGV 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +AE I A+ D DV +AG GF+N L+P++ +++++ ++ G+++GR+ +G Sbjct: 61 NPRALAEQIAAQFSGDADVAETSVAGPGFLNFRLTPTFWQRLVADVIGKGVDFGRSNLGD 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+G++VT+EYY+NDAG+QI+ LA Sbjct: 121 GLKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFTGFDVTKEYYVNDAGSQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SVF RY++AL + ++P G YPG YL VG+ LA + L N PEE+WL I+KD ++ Sbjct: 181 SVFLRYREALGEDIGEIPPGLYPGDYLVPVGQALAADFGPRLHNMPEEEWLGILKDRAID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IRDDL LN+ HD+F SE H G + IR I++L +G+VY+G LPPPK + Sbjct: 241 AMMVMIRDDLATLNVHHDVFFSERSLHAGSAAKIRTAINDLTFKGHVYKGTLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGF MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSYTYFAADVAYFKDKFDRGFSEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAV AVSE K ++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG Sbjct: 360 HGGYVKRLEAVNRAVSEGKTKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVGC 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 DSVRFMML+RK+SE LDFDF KV EQSK+NPVFYVQYA+ARC S+ RQA ++FPDLD Sbjct: 420 DSVRFMMLYRKSSESLDFDFAKVTEQSKDNPVFYVQYAHARCASVMRQALEVFPDLDISP 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 SE+ LI L EYPR++E A QEP+++AFYLYDLAS+ H HW+ G Sbjct: 480 EALGAADLSELSHESEVALIAKLGEYPRMLEAAASGQEPHRVAFYLYDLASMLHAHWNKG 539 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R+ P LRFV NR T+ RL LV+AVAS++ SGL+I G ++P EM Sbjct: 540 RDEPGLRFVNDKNRHSTVARLGLVYAVASVLKSGLSITGTDAPEEM 585 >gi|239831756|ref|ZP_04680085.1| arginyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301] gi|239824023|gb|EEQ95591.1| arginyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301] Length = 603 Score = 675 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 330/586 (56%), Positives = 431/586 (73%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF +R+K L++ID K K ++ L RI +E PRD +HG ++TNAAM+LS+ +G Sbjct: 19 MNIFADFDARIKKTLQDIDLKPKDGSELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 78 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A I + D DV++V +AG GFINL L SY ++ L++++ G ++GR+ +G Sbjct: 79 NPRELASRIAEALASDEDVETVDVAGPGFINLRLKASYWQRELAAMLNEGTDFGRSKLGS 138 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 GTKVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA Sbjct: 139 GTKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 198 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL + ++P G YPG YL VG+ELA ++ + LL PE + L +VKD ++ Sbjct: 199 SVMVRYREALGEDIGEIPSGLYPGDYLVPVGQELAKEFGTRLLEMPEAEALALVKDRTID 258 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL ALN+ HD+F SE H IR+ I++L +G+VY+G LPPPK + Sbjct: 259 AMMAMIRADLDALNVHHDVFFSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 318 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDG++TYFA D+AYFK KY+RGF+ MIYV+G+D Sbjct: 319 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGAFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 377 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+RDG P++MSKRAG+FITLR VVDEVG Sbjct: 378 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRDGEPVRMSKRAGEFITLRDVVDEVGR 437 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RKN LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D D D Sbjct: 438 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLADLDR 497 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 D SE+ L+ LAEYPR+IE A I QEP++LAFYLYDLAS FH W+ G Sbjct: 498 VGMAA-NFGKLTDESEIALVRKLAEYPRLIEAAAIHQEPHRLAFYLYDLASAFHSQWNRG 556 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ENP LRF++ N+ L++ RL LV V+ ++ SGL IIG ++P EM Sbjct: 557 TENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 602 >gi|114707222|ref|ZP_01440120.1| arginyl-tRNA synthetase [Fulvimarina pelagi HTCC2506] gi|114537418|gb|EAU40544.1| arginyl-tRNA synthetase [Fulvimarina pelagi HTCC2506] Length = 582 Score = 674 bits (1739), Expect = 0.0, Method: Composition-based stats. Identities = 313/585 (53%), Positives = 416/585 (71%), Gaps = 4/585 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +FADF R++ + + I L+R+ +E PRD AHG L++NAAM+L++P+GL Sbjct: 1 MNMFADFEMRVRAAVSTVLTDIGHAVPDLERVTVEPPRDPAHGDLASNAAMVLAKPMGLK 60 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE I ++ D D+ SV IAG GFIN+ L+P++ + L ++ + ++YGR G Sbjct: 61 PRDLAEKIAEKLGADEDIASVEIAGPGFINMRLAPAFWPRHLREMLNARLDYGRGAPT-G 119 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 K+N+E+VSANPTGPMHVGHCR AVVGD LA L+AFSG EVT+EYY+NDAG QI LA S Sbjct: 120 RKINVEYVSANPTGPMHVGHCRGAVVGDALARLLAFSGEEVTKEYYVNDAGEQIGVLARS 179 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 F RY++AL +PEG YPG YLK +G+ LAD++ L + P+ +W PIV+D +++A Sbjct: 180 AFLRYREALGEKIGMIPEGLYPGDYLKPLGRSLADEFGDSLRDKPQAEWEPIVRDRAIEA 239 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM +IR+DLK L I+H++F SE H D I + I NL +GYVY G LPPPK K + Sbjct: 240 MMDMIREDLKTLGIEHEVFFSERTLHDADGGKIANAIANLEEKGYVYRGALPPPKGKPQE 299 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + DR+Q L RST VGDD DRPL+KS+G YTYFAAD+AYF+ KYERGF MI+V+G+DH Sbjct: 300 DWE-DREQTLLRSTAVGDDQDRPLVKSNGLYTYFAADVAYFRDKYERGFSEMIFVLGADH 358 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 SGYVKRLEAVA A+S A+ +LC+LV+LYRDG P+KMSKR+GDF+TL VV+EVG D Sbjct: 359 SGYVKRLEAVAKAISGGTAKATAILCQLVKLYRDGAPVKMSKRSGDFVTLAEVVEEVGRD 418 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 VRFMML+RK+ LDFDF KV EQSK+NPVFYVQYA+AR SIFRQA++ D + Sbjct: 419 PVRFMMLYRKSDAPLDFDFQKVTEQSKDNPVFYVQYAHARAHSIFRQARETG--FDVSIG 476 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 D E LI LAE+PRV+++A A+EP++LAFYLYDLAS FH ++ G+ Sbjct: 477 APIEADLNLLRDEGETGLIAKLAEFPRVVQSAANAREPHRLAFYLYDLASAFHAQYNRGK 536 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P+LRFV + + ++ RL LV AVA+++ SGL+IIG ++P EM Sbjct: 537 DLPQLRFVNPSAPESSLARLALVDAVATVVRSGLDIIGAQAPEEM 581 >gi|254704184|ref|ZP_05166012.1| arginyl-tRNA synthetase [Brucella suis bv. 3 str. 686] gi|261754853|ref|ZP_05998562.1| arginyl-tRNA synthetase [Brucella suis bv. 3 str. 686] gi|261744606|gb|EEY32532.1| arginyl-tRNA synthetase [Brucella suis bv. 3 str. 686] Length = 585 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 333/586 (56%), Positives = 433/586 (73%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF +R+K L++ID K K ++ L RI +E PRD +HG ++TNAAM+LS+ +G Sbjct: 1 MNIFADFDARIKKTLQDIDLKQKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A I +K D DV+SV +AG GFINL L SY ++ L ++ G ++GR+ +G Sbjct: 61 NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL + ++P G YPG YL VG+ELA ++ ++LL PE + L IVKD ++ Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL ALN+ HD+F SE H IR+ I++L +G+VY+G LPPPK + Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RKN LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D +D D Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 E D SE+ L+ LAEYPR+IE+A I QEP++LAFYLYDLAS FH W+ G Sbjct: 480 VAMG-SHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQWNRG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ENP LRF++ N+ L++ RL LV V+ ++ SGL IIG ++P EM Sbjct: 539 TENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584 >gi|23501763|ref|NP_697890.1| arginyl-tRNA synthetase [Brucella suis 1330] gi|161618837|ref|YP_001592724.1| arginyl-tRNA synthetase [Brucella canis ATCC 23365] gi|225627365|ref|ZP_03785402.1| arginyl-tRNA synthetase [Brucella ceti str. Cudo] gi|254701641|ref|ZP_05163469.1| arginyl-tRNA synthetase [Brucella suis bv. 5 str. 513] gi|254706913|ref|ZP_05168741.1| arginyl-tRNA synthetase [Brucella pinnipedialis M163/99/10] gi|254709979|ref|ZP_05171790.1| arginyl-tRNA synthetase [Brucella pinnipedialis B2/94] gi|254713979|ref|ZP_05175790.1| arginyl-tRNA synthetase [Brucella ceti M644/93/1] gi|254716962|ref|ZP_05178773.1| arginyl-tRNA synthetase [Brucella ceti M13/05/1] gi|256031472|ref|ZP_05445086.1| arginyl-tRNA synthetase [Brucella pinnipedialis M292/94/1] gi|256159598|ref|ZP_05457360.1| arginyl-tRNA synthetase [Brucella ceti M490/95/1] gi|256254878|ref|ZP_05460414.1| arginyl-tRNA synthetase [Brucella ceti B1/94] gi|256369305|ref|YP_003106813.1| arginyl-tRNA synthetase [Brucella microti CCM 4915] gi|260168606|ref|ZP_05755417.1| arginyl-tRNA synthetase [Brucella sp. F5/99] gi|260566566|ref|ZP_05837036.1| arginyl-tRNA synthetase [Brucella suis bv. 4 str. 40] gi|261218767|ref|ZP_05933048.1| arginyl-tRNA synthetase [Brucella ceti M13/05/1] gi|261222062|ref|ZP_05936343.1| arginyl-tRNA synthetase [Brucella ceti B1/94] gi|261314377|ref|ZP_05953574.1| arginyl-tRNA synthetase [Brucella pinnipedialis M163/99/10] gi|261317527|ref|ZP_05956724.1| arginyl-tRNA synthetase [Brucella pinnipedialis B2/94] gi|261321734|ref|ZP_05960931.1| arginyl-tRNA synthetase [Brucella ceti M644/93/1] gi|261752194|ref|ZP_05995903.1| arginyl-tRNA synthetase [Brucella suis bv. 5 str. 513] gi|261758080|ref|ZP_06001789.1| arginyl-tRNA synthetase [Brucella sp. F5/99] gi|265988562|ref|ZP_06101119.1| arginyl-tRNA synthetase [Brucella pinnipedialis M292/94/1] gi|265998027|ref|ZP_06110584.1| arginyl-tRNA synthetase [Brucella ceti M490/95/1] gi|294852229|ref|ZP_06792902.1| arginyl-tRNA synthetase [Brucella sp. NVSL 07-0026] gi|38258388|sp|Q8G146|SYR_BRUSU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|189083524|sp|A9MAQ0|SYR_BRUC2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|23347691|gb|AAN29805.1| arginyl-tRNA synthetase [Brucella suis 1330] gi|161335648|gb|ABX61953.1| arginyl-tRNA synthetase [Brucella canis ATCC 23365] gi|225617370|gb|EEH14415.1| arginyl-tRNA synthetase [Brucella ceti str. Cudo] gi|255999465|gb|ACU47864.1| arginyl-tRNA synthetase [Brucella microti CCM 4915] gi|260156084|gb|EEW91164.1| arginyl-tRNA synthetase [Brucella suis bv. 4 str. 40] gi|260920646|gb|EEX87299.1| arginyl-tRNA synthetase [Brucella ceti B1/94] gi|260923856|gb|EEX90424.1| arginyl-tRNA synthetase [Brucella ceti M13/05/1] gi|261294424|gb|EEX97920.1| arginyl-tRNA synthetase [Brucella ceti M644/93/1] gi|261296750|gb|EEY00247.1| arginyl-tRNA synthetase [Brucella pinnipedialis B2/94] gi|261303403|gb|EEY06900.1| arginyl-tRNA synthetase [Brucella pinnipedialis M163/99/10] gi|261738064|gb|EEY26060.1| arginyl-tRNA synthetase [Brucella sp. F5/99] gi|261741947|gb|EEY29873.1| arginyl-tRNA synthetase [Brucella suis bv. 5 str. 513] gi|262552495|gb|EEZ08485.1| arginyl-tRNA synthetase [Brucella ceti M490/95/1] gi|264660759|gb|EEZ31020.1| arginyl-tRNA synthetase [Brucella pinnipedialis M292/94/1] gi|294820818|gb|EFG37817.1| arginyl-tRNA synthetase [Brucella sp. NVSL 07-0026] Length = 585 Score = 673 bits (1737), Expect = 0.0, Method: Composition-based stats. Identities = 333/586 (56%), Positives = 433/586 (73%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF +R+K L++ID K K ++ L RI +E PRD +HG ++TNAAM+LS+ +G Sbjct: 1 MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A I +K D DV+SV +AG GFINL L SY ++ L ++ G ++GR+ +G Sbjct: 61 NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL + ++P G YPG YL VG+ELA ++ ++LL PE + L IVKD ++ Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL ALN+ HD+F SE H IR+ I++L +G+VY+G LPPPK + Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RKN LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D +D D Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 E D SE+ L+ LAEYPR+IE+A I QEP++LAFYLYDLAS FH W+ G Sbjct: 480 VAMG-SHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQWNRG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ENP LRF++ N+ L++ RL LV V+ ++ SGL IIG ++P EM Sbjct: 539 TENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584 >gi|256060982|ref|ZP_05451140.1| arginyl-tRNA synthetase [Brucella neotomae 5K33] gi|261324984|ref|ZP_05964181.1| arginyl-tRNA synthetase [Brucella neotomae 5K33] gi|261300964|gb|EEY04461.1| arginyl-tRNA synthetase [Brucella neotomae 5K33] Length = 585 Score = 673 bits (1736), Expect = 0.0, Method: Composition-based stats. Identities = 333/586 (56%), Positives = 433/586 (73%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF +R+K L++ID K K ++ L RI +E PRD +HG ++TNAAM+LS+ +G Sbjct: 1 MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A I +K D DV+SV +AG GFINL L SY ++ L ++ G ++GR+ +G Sbjct: 61 NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL + ++P G YPG YL VG+ELA ++ ++LL PE + L IVKD ++ Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL ALN+ HD+F SE H IR+ I++L +G+VY+G LPPPK + Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RKN LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D +D D Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 E D SE+ L+ LAEYPR+IE+A I QEP++LAFYLYDLAS FH W+ G Sbjct: 480 VAMG-SHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQWNRG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ENP LRF++ N+ L++ RL LV V+ ++ SGL IIG ++P EM Sbjct: 539 TENPDLRFIKVNDPNLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584 >gi|306840369|ref|ZP_07473136.1| arginyl-tRNA synthetase [Brucella sp. BO2] gi|306289654|gb|EFM60854.1| arginyl-tRNA synthetase [Brucella sp. BO2] Length = 585 Score = 673 bits (1736), Expect = 0.0, Method: Composition-based stats. Identities = 332/586 (56%), Positives = 432/586 (73%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF +R+K L++ID K K ++ L RI +E PRD +HG ++TNAAM+LS+ +G Sbjct: 1 MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A I +K D DV+SV +AG GFINL L SY ++ L ++ G ++GR+ +G Sbjct: 61 NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL + ++P G YPG YL VG+ LA ++ ++LL PE + L IVKD ++ Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVPVGQALAGEFGTKLLEMPESEALAIVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL ALN+ HD+F SE H IR+ I++L +G+VY+G LPPPK + Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHLDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RKN LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D +D D Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 E D SE+ L+ LAEYPR+IE+A I QEP++LAFYLYDLAS FH W+ G Sbjct: 480 VAMG-SHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQWNRG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ENP LRF++ N+ L++ RL LV V+ ++ SGL IIG ++P EM Sbjct: 539 TENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584 >gi|163843148|ref|YP_001627552.1| arginyl-tRNA synthetase [Brucella suis ATCC 23445] gi|189083525|sp|B0CLK2|SYR_BRUSI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|163673871|gb|ABY37982.1| arginyl-tRNA synthetase [Brucella suis ATCC 23445] Length = 585 Score = 673 bits (1736), Expect = 0.0, Method: Composition-based stats. Identities = 333/586 (56%), Positives = 433/586 (73%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF +R+K L++ID K K ++ L RI +E PRD +HG ++TNAAM+LS+ +G Sbjct: 1 MNIFADFDARIKKTLQDIDLKQKDGGELDLSRIGVEPPRDASHGDIATNAAMLLSKAVGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A I +K D DV+SV +AG GFINL L SY ++ L ++ G ++GR+ +G Sbjct: 61 NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL + ++P G YPG YL VG+ELA ++ ++LL PE + L IVKD ++ Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL ALN+ HD+F SE H IR+ I++L +G+VY+G LPPPK + Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RKN LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D +D D Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 E D SE+ L+ LAEYPR+IE+A I QEP++LAFYLYDLAS FH W+ G Sbjct: 480 VAMG-SHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQWNRG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ENP LRF++ N+ L++ RL LV V+ ++ SGL IIG ++P EM Sbjct: 539 TENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584 >gi|225852389|ref|YP_002732622.1| arginyl-tRNA synthetase [Brucella melitensis ATCC 23457] gi|256264113|ref|ZP_05466645.1| arginyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9] gi|254782946|sp|C0RIL0|SYR_BRUMB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|225640754|gb|ACO00668.1| arginyl-tRNA synthetase [Brucella melitensis ATCC 23457] gi|263094331|gb|EEZ18176.1| arginyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9] gi|326408895|gb|ADZ65960.1| arginyl-tRNA synthetase [Brucella melitensis M28] gi|326538613|gb|ADZ86828.1| arginyl-tRNA synthetase [Brucella melitensis M5-90] Length = 585 Score = 672 bits (1735), Expect = 0.0, Method: Composition-based stats. Identities = 333/586 (56%), Positives = 433/586 (73%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF +R+K L++ID K K ++ L RI +E PRD +HG ++TNAAM+LS+ +G Sbjct: 1 MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A I +K D DV+SV +AG GFINL L SY ++ L ++ G ++GR+ +G Sbjct: 61 NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL + ++P G YPG YL VG+ELA ++ ++LL PE + L IVKD ++ Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL ALN+ HD+F SE H IR+ I++L +G+VY+G LPPPK + Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RKN LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D +D D Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 E D SE+ L+ LAEYPR+IE+A I QEP++LAFYLYDLAS FH W+ G Sbjct: 480 VAMG-SHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQWNRG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ENP LRF++ N+ L++ RL LV V+ ++ SGL IIG ++P EM Sbjct: 539 AENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584 >gi|307946867|ref|ZP_07662202.1| arginyl-tRNA synthetase [Roseibium sp. TrichSKD4] gi|307770531|gb|EFO29757.1| arginyl-tRNA synthetase [Roseibium sp. TrichSKD4] Length = 589 Score = 672 bits (1735), Expect = 0.0, Method: Composition-based stats. Identities = 314/589 (53%), Positives = 424/589 (71%), Gaps = 5/589 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIK-VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F +FS R+K+ LK +D + K L R+ +E PRD AHG L+TNAAM+LS+ +G+ Sbjct: 1 MNIFTEFSERVKDMLKGLDLQTKDGAAPDLSRVTVESPRDPAHGDLATNAAMVLSKQVGM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +AE + +K DPDV V +AG GFIN+ L+ S +K+L S++ G ++GR+ G Sbjct: 61 KPRDLAEKLAEALKNDPDVQDVDVAGPGFINMRLAHSVWQKVLKSVLEQGQDFGRSDFGG 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G K N+E+VSANPTGPMHVGH R AVVGD LA+L+AF+GY+VTREYYINDAG+QI+TLA Sbjct: 121 GKKTNVEYVSANPTGPMHVGHTRGAVVGDVLANLLAFAGYDVTREYYINDAGSQIDTLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY++AL + ++P G YPG YLK VG++LA Y L + PEE+WLP+VK S+ Sbjct: 181 SAFLRYREALGEDIGEIPAGLYPGDYLKPVGEKLAADYKESLKDKPEEEWLPVVKGLSIS 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFH---RGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 MM +IR+DL +LN+ HD+F SE H G+ S I +++D L + VY+G LPPPK Sbjct: 241 MMMDMIREDLASLNVHHDVFFSERTLHSRGEGNVSKIDEMLDALRNRDLVYQGTLPPPKG 300 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + + DR+Q LFR++ GDD DR L KSDGSYTYFAAD+AYF+ K++R F MIYV+ Sbjct: 301 QVPDDWE-DREQTLFRASDYGDDTDRALKKSDGSYTYFAADVAYFRDKFQRDFKEMIYVL 359 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G+DHSGY KRL+AV AVS+ +A++ V C+LV+L+R G P KMSKR+GDFITLR VVDE Sbjct: 360 GADHSGYAKRLQAVGKAVSDSQAEVVVRFCQLVKLFRGGEPFKMSKRSGDFITLRDVVDE 419 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG D VRFMML+RKN LDFDF KV EQSK+NPVFYVQY +ARCRS+ RQA + + Sbjct: 420 VGRDPVRFMMLYRKNDAPLDFDFQKVTEQSKDNPVFYVQYGHARCRSVMRQAAEELSGVA 479 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 D + D+ EL+L+ +A +P+++E A EP+++AFYL+DLAS HGHW Sbjct: 480 IDDKALAEADFSALTDSGELELLAKMAVWPKIVEAAAETHEPHRIAFYLHDLASSLHGHW 539 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + G+E P+LRF+ A++ KLT+ RL +V AV+S+I SGL+++GV++P EM Sbjct: 540 NRGKELPQLRFINADDTKLTVARLAMVRAVSSVIASGLSVLGVDAPEEM 588 >gi|254718981|ref|ZP_05180792.1| arginyl-tRNA synthetase [Brucella sp. 83/13] gi|265983971|ref|ZP_06096706.1| arginyl-tRNA synthetase [Brucella sp. 83/13] gi|306837329|ref|ZP_07470210.1| arginyl-tRNA synthetase [Brucella sp. NF 2653] gi|306843774|ref|ZP_07476372.1| arginyl-tRNA synthetase [Brucella sp. BO1] gi|264662563|gb|EEZ32824.1| arginyl-tRNA synthetase [Brucella sp. 83/13] gi|306275852|gb|EFM57568.1| arginyl-tRNA synthetase [Brucella sp. BO1] gi|306407581|gb|EFM63779.1| arginyl-tRNA synthetase [Brucella sp. NF 2653] Length = 585 Score = 672 bits (1734), Expect = 0.0, Method: Composition-based stats. Identities = 332/586 (56%), Positives = 432/586 (73%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF +R+K L++ID K K ++ L RI +E PRD +HG ++TNAAM+LS+ +G Sbjct: 1 MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A I +K D DV+SV +AG GFINL L SY ++ L ++ G ++GR+ +G Sbjct: 61 NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL + ++P G YPG YL VG+ LA ++ ++LL PE + L IVKD ++ Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVPVGQALAGEFGTKLLEMPEAEALAIVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL ALN+ HD+F SE H IR+ I++L +G+VY+G LPPPK + Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHLDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RKN LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D +D D Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 E D SE+ L+ LAEYPR+IE+A I QEP++LAFYLYDLAS FH W+ G Sbjct: 480 VAMG-SHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQWNRG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ENP LRF++ N+ L++ RL LV V+ ++ SGL IIG ++P EM Sbjct: 539 TENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584 >gi|153009679|ref|YP_001370894.1| arginyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188] gi|166232816|sp|A6X1G1|SYR_OCHA4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|151561567|gb|ABS15065.1| arginyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188] Length = 585 Score = 671 bits (1732), Expect = 0.0, Method: Composition-based stats. Identities = 330/586 (56%), Positives = 432/586 (73%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF +R+K L++ID K K + L RI +E PRD +HG ++TNAAM+LS+ +G Sbjct: 1 MNIFADFDARIKKTLQDIDLKPKDGGDLDLSRIGVEPPRDSSHGDIATNAAMVLSKAVGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A I + D DV++V +AG GFINL L +Y ++ LS+++ G ++GR+ +G Sbjct: 61 NPRELAGRIAEALASDADVETVDVAGPGFINLRLKATYWQRELSAMLNEGKDFGRSKLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G+KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA Sbjct: 121 GSKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL N ++P G YPG YL VG+ELA ++ S+LL PE + L +VKD ++ Sbjct: 181 SVMLRYREALGENIGEIPSGLYPGDYLVPVGQELAKEFGSKLLEMPEAEALALVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL ALN+ HD+F SE H IR+ I++L +G+VY+G LPPPK + Sbjct: 241 AMMAMIRADLDALNVHHDVFFSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDG++TYFA D+AYFK KY+RGF+ MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGAFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+RDG P++MSKR+G+FITLR VVDEVG Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRDGEPVRMSKRSGEFITLRDVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RKN LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D D D Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLADLDR 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + D SE+ L+ LAEYPR+IE A I QEP++LAFYLYDLAS FH W+ G Sbjct: 480 VGMAA-HFDKLTDESEIALVRKLAEYPRLIEAAAIHQEPHRLAFYLYDLASAFHSQWNRG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ENP LRF++ N+ L++ RL LV V+ ++ SGL IIG ++P EM Sbjct: 539 TENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584 >gi|256113415|ref|ZP_05454264.1| arginyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether] gi|265994813|ref|ZP_06107370.1| arginyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether] gi|262765926|gb|EEZ11715.1| arginyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether] Length = 585 Score = 671 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 332/586 (56%), Positives = 432/586 (73%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF +R+K L++ID K K ++ L RI +E PRD +HG ++TNAAM+LS+ +G Sbjct: 1 MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A I +K D DV+SV +AG GFINL L SY ++ L ++ G ++GR+ +G Sbjct: 61 NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL + ++P G YPG YL VG+ELA ++ ++LL PE + L IVKD ++ Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL ALN+ HD+F SE H IR+ I++L +G+VY+G LPPPK + Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RKN LDFDF KV E SK+NPVFYVQYA ARC S+FRQA D +D D Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEPSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 E D SE+ L+ LAEYPR+IE+A I QEP++LAFYLYDLAS FH W+ G Sbjct: 480 VAMG-SHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQWNRG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ENP LRF++ N+ L++ RL LV V+ ++ SGL IIG ++P EM Sbjct: 539 AENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584 >gi|148560686|ref|YP_001258851.1| arginyl-tRNA synthetase [Brucella ovis ATCC 25840] gi|166232762|sp|A5VQ54|SYR_BRUO2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|148371943|gb|ABQ61922.1| arginyl-tRNA synthetase [Brucella ovis ATCC 25840] Length = 585 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 332/586 (56%), Positives = 430/586 (73%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF +R+K L++ID K K ++ L RI +E PRD +HG ++TNAAM+LS+ +G Sbjct: 1 MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A I +K D DV+SV +AG GFINL L SY ++ L ++ G ++GR+ +G Sbjct: 61 NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL + ++P G YPG YL VG+ELA ++ ++LL PE + L IVKD ++ Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL ALN+ HD+F SE H IR+ I++L +G+VY+G LPPPK + Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + D +Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+RGF+ MIYV+G+D Sbjct: 301 GDWE-DCEQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDRGFNEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P +MSKRAG+FITLR VVDEVG Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPARMSKRAGEFITLRDVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RKN LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D +D D Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 E D SE+ L+ LAEYPR+IE+A I QEP++LAFYLYDLAS FH W+ G Sbjct: 480 VAMG-SHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQWNRG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ENP LRF++ N+ L++ RL LV V+ ++ SGL IIG ++P EM Sbjct: 539 TENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584 >gi|17987372|ref|NP_540006.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|256044550|ref|ZP_05447454.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|260563903|ref|ZP_05834389.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|265990976|ref|ZP_06103533.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1] gi|23822196|sp|Q8YGR9|SYR_BRUME RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|17983059|gb|AAL52270.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|260153919|gb|EEW89011.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M] gi|263001760|gb|EEZ14335.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1] Length = 585 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 332/586 (56%), Positives = 432/586 (73%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF +R+K L++ID K K ++ L RI +E PRD +HG ++TNAAM+LS+ +G Sbjct: 1 MNIFADFDARIKKTLQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A I +K D DV+SV +AG GFINL L SY ++ L ++ G ++GR+ +G Sbjct: 61 NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL + ++P G YPG YL VG+ELA ++ ++LL PE + L IVKD ++ Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL ALN+ HD+F SE H IR+ I++L +G+VY+G LPPPK + Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGQLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+AYFK KY+ GF+ MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVAYFKDKYDHGFNEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RKN LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D +D D Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 E D SE+ L+ LAEYPR+IE+A I QEP++LAFYLYDLAS FH W+ G Sbjct: 480 VAMG-SHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQWNRG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ENP LRF++ N+ L++ RL LV V+ ++ SGL IIG ++P EM Sbjct: 539 AENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584 >gi|118589112|ref|ZP_01546519.1| arginyl-tRNA synthetase [Stappia aggregata IAM 12614] gi|118438441|gb|EAV45075.1| arginyl-tRNA synthetase [Stappia aggregata IAM 12614] Length = 589 Score = 669 bits (1727), Expect = 0.0, Method: Composition-based stats. Identities = 308/589 (52%), Positives = 416/589 (70%), Gaps = 5/589 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCK-IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF+ R+K+ L+++D K E L R+V+E PRD AHG L+TNAAM+L++PLG+ Sbjct: 1 MNIFADFTQRVKDALQDLDLKDSNGESPDLSRVVVEAPRDPAHGDLATNAAMVLAKPLGM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +AE +VAR+ DP++ IAG GFINL ++ + ++L+S++ GI +G Sbjct: 61 KPRDVAEQLVARLNADPEITETSIAGPGFINLRVAQTVWHRVLASVLAEGIRFGAQERSP 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 KVN+E+VSANPTGPMHVGH R AVVGD LA+++AF+G EV +EYYINDAG+QI+TLA Sbjct: 121 APKVNVEYVSANPTGPMHVGHIRGAVVGDALANILAFAGNEVVKEYYINDAGSQIDTLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY++AL + ++P G YPG YLK VG++L ++ S L + E +WLP+VK+ ++ Sbjct: 181 SAFLRYREALGEDIGEIPAGLYPGDYLKPVGEKLKAEFGSSLADMEEREWLPLVKERAIA 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFH---RGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 AM+++IR DL AL ++H++F SE H G+ S I +++ L +G +YEG LPPPK Sbjct: 241 AMLELIRQDLAALGVEHEVFYSERTLHDRGEGNGSKIDHMLETLRNKGLIYEGTLPPPKG 300 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + + DR+Q LFR++ GDD DR L KSDGSYTYFAAD+AYF+ K+ERGF IYV+ Sbjct: 301 QVPDDWE-DREQTLFRASDFGDDTDRALKKSDGSYTYFAADVAYFQDKFERGFTETIYVL 359 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G+DH GY KRL+AV A+S+ K ++ V C+LV+L RDG P+KMSKR+GDFITLR VVDE Sbjct: 360 GADHGGYAKRLQAVGKAISDGKTEVVVRFCQLVKLMRDGEPVKMSKRSGDFITLRDVVDE 419 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG D VRFMML+RKN LDFDF KV EQSK+NPVFYVQY +ARC S+ RQA D + Sbjct: 420 VGPDPVRFMMLFRKNDAPLDFDFKKVTEQSKDNPVFYVQYGHARCCSVLRQAADELKEAG 479 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 F + D E +L +AE+P+V+E A EP+++AFYL++LAS HGHW Sbjct: 480 FAVEDLARADFSLLDDVGEQELFAKMAEWPKVVEAAAETHEPHRIAFYLHELASSLHGHW 539 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + G E P LRF+QA N KLT+ RL LV AV+ ++ SGL I+GV +P EM Sbjct: 540 NKGYELPHLRFIQAGNLKLTLARLALVRAVSLVLASGLTILGVNAPEEM 588 >gi|110634164|ref|YP_674372.1| arginyl-tRNA synthetase [Mesorhizobium sp. BNC1] gi|123353590|sp|Q11HB8|SYR_MESSB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|110285148|gb|ABG63207.1| arginyl-tRNA synthetase [Chelativorans sp. BNC1] Length = 585 Score = 669 bits (1727), Expect = 0.0, Method: Composition-based stats. Identities = 319/586 (54%), Positives = 424/586 (72%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADFS R+ N +K ++ K K ++ L R+ +E PRD +HG ++TNAAM+LS+ +G Sbjct: 1 MNIFADFSDRIINAVKALELKPKEGGELDLSRVAVEPPRDPSHGDIATNAAMVLSKAVGE 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P + E + A + DPDV +AG GF+NL L + L +++ +YGR+ +G Sbjct: 61 NPRALGERLAAALAEDPDVAEASVAGPGFVNLRLGNGFWHARLGEMLLLAGDYGRSKMGN 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD L++L+AF+GY+VTREYYINDAGAQI+ L Sbjct: 121 GHKVNVEYVSANPTGPMHVGHCRGAVVGDALSNLLAFAGYDVTREYYINDAGAQIDVLGR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL + +PEG YPG YLK VGK LAD+Y ++LL P E+ L I KD ++ Sbjct: 181 SVLMRYREALGEDIGQIPEGLYPGDYLKPVGKALADEYGTKLLERPAEEALKIAKDTAID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL ALN+ HD+F SE H G+ IR I++L +G+VY+G LPPPK + Sbjct: 241 AMMAMIREDLAALNVHHDVFFSERSLHAGNGGTIRSAINDLTLKGHVYKGKLPPPKGQVL 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDG++TYFAAD+AY K KY RGF+++IYV+G+D Sbjct: 301 EDWE-DREQTLFRSTDVGDDIDRPLIKSDGTFTYFAADVAYMKDKYSRGFEHLIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEA+A A+SE K + VLLC+LV+L+R+G P++MSKRAG+F+TLR V+DEVG Sbjct: 360 HGGYVKRLEALARAISEGKLHLTVLLCQLVKLFRNGEPVRMSKRAGEFVTLRDVIDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+VRFMML+RK+ LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA + FD Sbjct: 420 DAVRFMMLYRKSDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQASEQLNVRKFDR 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 D E+ LI LAEYPR+IE+A A EP++LAFYLY+LA+ FH W+ G Sbjct: 480 EAMKAALH-RLDDPGEIALIRKLAEYPRLIESAAQALEPHRLAFYLYELANQFHVQWNRG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 E RLRFV+ N+ +LT RL LV AV ++ SGL ++G ++P EM Sbjct: 539 SETDRLRFVKVNDPELTHARLGLVQAVCDVVRSGLALVGADAPEEM 584 >gi|62289822|ref|YP_221615.1| arginyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941] gi|82699747|ref|YP_414321.1| arginyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308] gi|189024063|ref|YP_001934831.1| arginyl-tRNA synthetase [Brucella abortus S19] gi|237815307|ref|ZP_04594305.1| arginyl-tRNA synthetase [Brucella abortus str. 2308 A] gi|254689127|ref|ZP_05152381.1| arginyl-tRNA synthetase [Brucella abortus bv. 6 str. 870] gi|254693610|ref|ZP_05155438.1| arginyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya] gi|254697260|ref|ZP_05159088.1| arginyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|254730159|ref|ZP_05188737.1| arginyl-tRNA synthetase [Brucella abortus bv. 4 str. 292] gi|256257376|ref|ZP_05462912.1| arginyl-tRNA synthetase [Brucella abortus bv. 9 str. C68] gi|260545431|ref|ZP_05821172.1| arginyl-tRNA synthetase [Brucella abortus NCTC 8038] gi|260754626|ref|ZP_05866974.1| arginyl-tRNA synthetase [Brucella abortus bv. 6 str. 870] gi|260757849|ref|ZP_05870197.1| arginyl-tRNA synthetase [Brucella abortus bv. 4 str. 292] gi|260761672|ref|ZP_05874015.1| arginyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|260883653|ref|ZP_05895267.1| arginyl-tRNA synthetase [Brucella abortus bv. 9 str. C68] gi|261213876|ref|ZP_05928157.1| arginyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya] gi|297248226|ref|ZP_06931944.1| arginyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196] gi|75496922|sp|Q57DN0|SYR_BRUAB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|109894975|sp|Q2YNJ9|SYR_BRUA2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|238689361|sp|B2S5B0|SYR_BRUA1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|62195954|gb|AAX74254.1| ArgS, arginyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941] gi|82615848|emb|CAJ10852.1| Arginyl-tRNA synthetase, class Ic:Aminoacyl-tRNA synthetase, class I:Arginyl tRNA synthetase N-terminal domain [Brucella melitensis biovar Abortus 2308] gi|189019635|gb|ACD72357.1| arginyl-tRNA synthetase [Brucella abortus S19] gi|237790144|gb|EEP64354.1| arginyl-tRNA synthetase [Brucella abortus str. 2308 A] gi|260096838|gb|EEW80713.1| arginyl-tRNA synthetase [Brucella abortus NCTC 8038] gi|260668167|gb|EEX55107.1| arginyl-tRNA synthetase [Brucella abortus bv. 4 str. 292] gi|260672104|gb|EEX58925.1| arginyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59] gi|260674734|gb|EEX61555.1| arginyl-tRNA synthetase [Brucella abortus bv. 6 str. 870] gi|260873181|gb|EEX80250.1| arginyl-tRNA synthetase [Brucella abortus bv. 9 str. C68] gi|260915483|gb|EEX82344.1| arginyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya] gi|297175395|gb|EFH34742.1| arginyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196] Length = 585 Score = 668 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 331/586 (56%), Positives = 431/586 (73%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF +R+K ++ID K K ++ L RI +E PRD +HG ++TNAAM+LS+ +G Sbjct: 1 MNIFADFDARIKKTFQDIDLKPKDGGELDLSRIGVEPPRDASHGDIATNAAMVLSKAVGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A I +K D DV+SV +AG GFINL L SY ++ L ++ G ++GR+ +G Sbjct: 61 NPRELAARIAEALKADEDVESVDVAGPGFINLRLKASYWQRELLVMLNEGTDFGRSRLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY+V +EYYINDAGAQI+ LA Sbjct: 121 GKKVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLKFAGYDVVKEYYINDAGAQIDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL + ++P G YPG YL VG+ELA ++ ++LL PE + L IVKD ++ Sbjct: 181 SVMLRYREALGESIGEIPAGLYPGDYLVRVGQELAGEFGTKLLEMPEAEALAIVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL ALN+ HD+F SE H IR+ I++L +G+VY+G LPPPK + Sbjct: 241 AMMAMIRADLDALNVHHDVFYSERKLHVDHARAIRNAINDLTLKGHVYKGKLPPPKGRLP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST VGDD+DRPL+KSDGS+TYFA D+ YFK KY+RGF+ MIYV+G+D Sbjct: 301 EDWE-DREQTLFRSTEVGDDIDRPLMKSDGSFTYFAGDVTYFKDKYDRGFNEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEAVA AVS+ KA++ VLLC+LV+L+R+G P++MSKRAG+FITLR VVDEVG Sbjct: 360 HGGYVKRLEAVARAVSDGKAKLTVLLCQLVKLFRNGEPVRMSKRAGEFITLRDVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RKN LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA D +D D Sbjct: 420 DPVRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQAADQLGLVDLDR 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 E D SE+ L+ LAEYPR+IE+A I QEP++LAFYLYDLAS FH W+ G Sbjct: 480 VAMG-SHFEKLTDESEIALVRKLAEYPRLIESAAIHQEPHRLAFYLYDLASSFHSQWNRG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ENP LRF++ N+ L++ RL LV V+ ++ SGL IIG ++P EM Sbjct: 539 AENPDLRFIKVNDPDLSLARLGLVQVVSDVLTSGLTIIGADAPTEM 584 >gi|158424430|ref|YP_001525722.1| arginyl-tRNA synthetase [Azorhizobium caulinodans ORS 571] gi|172047969|sp|A8I9L7|SYR_AZOC5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|158331319|dbj|BAF88804.1| arginyl-tRNA synthetase [Azorhizobium caulinodans ORS 571] Length = 586 Score = 665 bits (1717), Expect = 0.0, Method: Composition-based stats. Identities = 304/586 (51%), Positives = 411/586 (70%), Gaps = 2/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M ++A F+ ++ + + ++ + L RIV+E PRD AHG L+TNAAM+L++ L + Sbjct: 1 MNVYAIFADHVREAVAALAGELPEAGALDLSRIVVEPPRDAAHGDLATNAAMVLAKDLKM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +AE I AR+ P+V V +AG GFINL L Y +L++++ +G ++GR+ +G Sbjct: 61 KPRDLAEKIAARLAQVPNVAKVDVAGPGFINLTLDAGYWPGVLAALLRAGTDFGRSDLGG 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G VN+E+VSANPTGPMHVGHCR AV GD LASL+AF+G++VTREYYINDAGAQ++ LA Sbjct: 121 GEAVNVEYVSANPTGPMHVGHCRGAVFGDALASLLAFAGFKVTREYYINDAGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++A ++P+G YPG YL VGK LA+ + SE L PE +WLPI + +++ Sbjct: 181 SAYLRYREAATGETVEIPDGLYPGDYLVPVGKTLAEVHGSEYLESPESEWLPIFRTFAIG 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM++IRDDL+AL I D+F SE + I+ L R G VYEG LPPPK Sbjct: 241 AMMEMIRDDLQALGISFDVFFSERSLTAAGIDRVGLTIEQLRRTGEVYEGRLPPPKGAPI 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST GDDVDRPL+KSDGSYTYFA D+AY K K++RGF MI V G+D Sbjct: 301 EDWE-DREQSLFRSTAHGDDVDRPLVKSDGSYTYFAGDIAYHKDKFDRGFRRMIDVWGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A AV+ +A ++V LC+LVRL R+G ++MSKRAG F+TLR VVDEVG Sbjct: 360 HGGYVKRMQAAVKAVTAGQATLDVELCQLVRLLRNGEQVRMSKRAGSFVTLREVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+VRFMML+RKN LDFD KV EQS+ENPVFYVQYA+AR +SI R AK+ DL Sbjct: 420 DAVRFMMLFRKNDATLDFDLAKVIEQSRENPVFYVQYAHARAQSILRNAKEQHADLPESG 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 P + D EL L+ LA +PR++E A A+EP+++AFYL+++AS FHG W+ G Sbjct: 480 AIYAHAPLDRLTDEGELGLVKRLAGWPRLVEQAAHAREPHRVAFYLHEVASEFHGQWNRG 539 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ P LRF+ N+R+LTM RL LVH VA+++ SGL ++GVE+ +EM Sbjct: 540 KDLPHLRFIIENDRELTMARLALVHGVAAVLASGLGLLGVEAVDEM 585 >gi|298291873|ref|YP_003693812.1| arginyl-tRNA synthetase [Starkeya novella DSM 506] gi|296928384|gb|ADH89193.1| arginyl-tRNA synthetase [Starkeya novella DSM 506] Length = 588 Score = 664 bits (1714), Expect = 0.0, Method: Composition-based stats. Identities = 315/589 (53%), Positives = 411/589 (69%), Gaps = 6/589 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFA F+ +++ + ++ + V I R+V+E PRD +HG L+TNAAM+L++ G+ Sbjct: 1 MNLFAIFADHVRDAVAQLATEGAVPAGIDTTRVVVEPPRDASHGDLATNAAMVLAKDAGM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +A+ + A++ P V V +AG GFIN+ L SY +IL++++ +G +YGR G Sbjct: 61 KPRELADKLTAKLAALPGVAKVDVAGPGFINIALDGSYWPRILAAVLNAGRDYGRTDAGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G K+N+E+VSANPTGPMHVGHCR AV GD LA+L+AF+G++VTREYYINDAGAQ++ LA Sbjct: 121 GQKINVEYVSANPTGPMHVGHCRGAVFGDALANLLAFAGWKVTREYYINDAGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY++AL S +PEG YPG YL VGK L KY +L+ E +WLP V+ ++ Sbjct: 181 SAFLRYREALGETIS-IPEGLYPGDYLVPVGKALVAKYGRTMLDRSEAEWLPAVRKAAID 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFH---RGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 AMM +IRDDL ALNI HD+F SE H G PS I ++D L + VYEG LPPPK Sbjct: 240 AMMAMIRDDLAALNIHHDVFFSERTLHARPDGQPSIIDRLLDELRARNLVYEGRLPPPKG 299 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + + + DR+Q LFR+T GDDVDRPL+KSDG+YTYFAAD+AY K KY+RGF MI V Sbjct: 300 QPIEDWE-DREQTLFRATDFGDDVDRPLMKSDGAYTYFAADIAYHKDKYDRGFKRMIDVW 358 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G+DH GYVKR++A A S +A ++V LC+LVRL R G P+KMSKRAGDF+TLR VVDE Sbjct: 359 GADHGGYVKRMQAAVKAASGGEASLDVELCQLVRLLRAGEPVKMSKRAGDFVTLREVVDE 418 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG D+VRFMM+ RKN +LDFD KV EQS++NPVFYVQYA+AR SI R AK+ F DL Sbjct: 419 VGRDAVRFMMINRKNDAVLDFDLAKVIEQSRDNPVFYVQYAHARASSILRNAKEAFTDLP 478 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 + D E+ LI +A YPR++E A A+EP++LAFYLYDLAS H W Sbjct: 479 AEAAAFASAELTLLEDEGEIALIKLIASYPRIVEQAAAAREPHRLAFYLYDLASALHAQW 538 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + G++ P LRF+ ++RK T RL LVHAVA II SGL+I+GV +P EM Sbjct: 539 NRGKDLPHLRFIIEDDRKSTYARLALVHAVALIIASGLSILGVGAPEEM 587 >gi|319783184|ref|YP_004142660.1| arginyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169072|gb|ADV12610.1| arginyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 585 Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats. Identities = 310/586 (52%), Positives = 423/586 (72%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVE-KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF++R+ ++ +D K K L RI +E PRD +HG L+TNAAM+L++P G Sbjct: 1 MNIFADFTARIIKAVEALDLKDKDGISPDLSRIAVEPPRDASHGDLATNAAMVLAKPTGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +AE + ++ D DV + +AG GF+NL L + + L++++ G YGR+ +G Sbjct: 61 NPRALAERLAQALRDDKDVAATEVAGPGFVNLRLKDGFWQTHLTALLGEGRNYGRSTVGG 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G K N+E+VSANPTGPMHVGHCR AVVGD LA+LMAF+GY+VT+EY INDAG+QI+ L Sbjct: 121 GRKTNVEYVSANPTGPMHVGHCRGAVVGDALANLMAFAGYDVTKEYVINDAGSQIDVLGR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY++AL ++ ++P G YPG YL VG+ L ++ LL P+++ L IVKD ++ Sbjct: 181 SAFLRYREALGDDIGEIPAGLYPGDYLVPVGQALVAEFGRSLLQMPDDEALAIVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL LN+ HD+F SE H + IR I++L +G++Y+G LPPPK + Sbjct: 241 AMMAMIREDLAMLNVHHDVFFSERTLHADNARKIRSAINDLTLKGHIYKGKLPPPKGEKP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + DR+Q LFRST VGDD+DR L+KSDGS+TYFAAD+AY K K +RGF ++IYV+G+D Sbjct: 301 DDWE-DREQTLFRSTAVGDDMDRALVKSDGSFTYFAADVAYLKDKVDRGFVDLIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEA+A A++ ++ ++ VLLC LV+L+R+G P++MSKR+GDF+TLR VV+EVG Sbjct: 360 HGGYVKRLEALARAIAGEEVKLTVLLCNLVKLFREGEPVRMSKRSGDFVTLREVVEEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D++RFMML+RKN LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA + + +FD Sbjct: 420 DAIRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQASEQLGEANFDR 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 D E+ LI LAEYPR+IE+A +A EP++LAFYLYDLAS FHGHW+ G Sbjct: 480 NSLASA-AALLTDEGEIGLIRKLAEYPRLIESAALALEPHRLAFYLYDLASSFHGHWNRG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +NP LRFV+ N+R+LT RL LV AV+ ++ SGL +IG +P EM Sbjct: 539 TDNPDLRFVKVNDRQLTHARLGLVQAVSDVLTSGLTLIGAAAPTEM 584 >gi|209885394|ref|YP_002289251.1| arginyl-tRNA synthetase [Oligotropha carboxidovorans OM5] gi|209873590|gb|ACI93386.1| arginyl-tRNA synthetase [Oligotropha carboxidovorans OM5] Length = 597 Score = 660 bits (1702), Expect = 0.0, Method: Composition-based stats. Identities = 305/589 (51%), Positives = 407/589 (69%), Gaps = 6/589 (1%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 ++FAD R++ + + + + I L RIV+E P+D +HG ++TNAAM+L++ Sbjct: 9 HIFADILGRVQGVCRALIADGTLPEGIDLSRIVVEPPKDASHGDMATNAAMVLAKEAKTK 68 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A+ I A++ DP V SV +AG GFINL L L +++ +G YGR+ IG G Sbjct: 69 PRDLADKIAAKLGADPQVASVSVAGPGFINLTLKNEAWFDALRAVLNTGAAYGRSEIGAG 128 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KVN+E+VSANPTGPMHVGHCR AV GD LA+L+AF+GY+VT+EYYINDAGAQ++ LA S Sbjct: 129 EKVNVEYVSANPTGPMHVGHCRGAVFGDALATLLAFAGYDVTKEYYINDAGAQVDVLARS 188 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 F RY++AL ++P+G YPG YLK VG+ LA +Y +L+ PE +WLP+V++ ++ Sbjct: 189 AFLRYREALGEAIGEIPDGLYPGDYLKPVGEALAKEYGDKLVKQPEAEWLPLVREKAIAM 248 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM++IR DL ALNI+HD+F SE G + I L +G VYEG LPPPK + Sbjct: 249 MMEMIRGDLAALNIKHDVFFSERSLIVGGTDQVGATIAGLRAKGDVYEGRLPPPKGAPVE 308 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + DR+Q LFR+T GDDVDRPL KSDGSYTYFA+D+AY K K++RGF NM+ V G+DH Sbjct: 309 DYE-DREQTLFRATAFGDDVDRPLKKSDGSYTYFASDIAYHKNKFDRGFRNMVDVWGADH 367 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY+KR++A AV+ + ++V + +LVRL R G P+KMSKRAGDF+TLR VVDEVGSD Sbjct: 368 GGYIKRVQAAIKAVTAGEGTLDVKIVQLVRLLRAGEPVKMSKRAGDFVTLREVVDEVGSD 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD-- 478 +VRFMML+RKN +LDFD KV EQSK+NPVFYVQY +AR S+F+ A+ PDL D Sbjct: 428 AVRFMMLFRKNDAVLDFDLAKVLEQSKDNPVFYVQYGHARGHSVFKNARVTVPDLPEDNG 487 Query: 479 --LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 L P E D EL LI LA +PR +E A A EP+++AFYLYDLAS FH W Sbjct: 488 KRLAFLAGAPVERLTDPVELSLIRQLALFPRTLEAAAAAHEPHRIAFYLYDLASEFHALW 547 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + GR+ P LRF+ N+ ++T+ RL LV V S++ SGL ++GV +PNEM Sbjct: 548 TKGRDAPHLRFIIENDAEMTVARLALVQGVVSVLASGLAVLGVHAPNEM 596 >gi|92117303|ref|YP_577032.1| arginyl-tRNA synthetase [Nitrobacter hamburgensis X14] gi|123265276|sp|Q1QMH5|SYR_NITHX RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|91800197|gb|ABE62572.1| arginyl-tRNA synthetase [Nitrobacter hamburgensis X14] Length = 597 Score = 658 bits (1699), Expect = 0.0, Method: Composition-based stats. Identities = 304/589 (51%), Positives = 405/589 (68%), Gaps = 6/589 (1%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 +LFAD +R+ + + + + L RIV+E PR+ +HG ++TNAAM+L++ Sbjct: 9 HLFADVLARVHAVCSALVEEGALPAGLDLSRIVVEPPREASHGDMATNAAMVLAKGAKSK 68 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE + A+++ D +D IAG GFINL L P L +++ G YGR+ IG G Sbjct: 69 PRDLAEKVAAKLRADGLIDKAEIAGPGFINLTLKPQVWSDALRTVLREGDGYGRSAIGAG 128 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KVN+E+VSANPTGPMHVGHCR AV GD LASL++F+GY VTREYYINDAGAQ++ LA S Sbjct: 129 EKVNVEYVSANPTGPMHVGHCRGAVFGDALASLLSFAGYGVTREYYINDAGAQVDVLARS 188 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 + RY++AL + ++PEG YPG YLK VG+ LA ++ LL PE +WLP+ + ++ Sbjct: 189 AYLRYREALGQDIGEIPEGLYPGDYLKPVGQALAAEHGDSLLKAPEAEWLPVARAKAIAM 248 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM++I+ DL ALNIQH++F SE G + ID L +G VYEG LPPPK + Sbjct: 249 MMEMIKGDLAALNIQHEVFFSERSLIEGGSDRVAATIDFLRAKGDVYEGRLPPPKGAPVE 308 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + DR+Q LFR+T GDD+DRPL KSDG YTYFA+D+AY K K++RGF NM+ V G+DH Sbjct: 309 DYE-DREQTLFRATAYGDDIDRPLKKSDGGYTYFASDIAYHKTKFDRGFLNMVDVWGADH 367 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY+KR++A AV+ KA ++V + +LV+L R+G P+KMSKR+GDF+TLR VVDEVGSD Sbjct: 368 GGYIKRVQAAIKAVTSGKATLDVKIVQLVKLLRNGEPVKMSKRSGDFVTLREVVDEVGSD 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +VRFMML+RKN +LDFD KV EQSK+NPVFYVQY +AR SIFR A++ FPDL D Sbjct: 428 AVRFMMLFRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGFSIFRNAREAFPDLPEDAS 487 Query: 481 PRNVIPQ----ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 R E D +EL L+ LA YPR +E A +A EP+++AFYLYDLAS FH W Sbjct: 488 KRAAFLAAAAVERLTDPAELGLLRRLALYPRTVEAAALAHEPHRIAFYLYDLASEFHALW 547 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + GR+ P LRF+ N+ +T RL LV V S++ SGL ++GV +PNEM Sbjct: 548 TKGRDMPHLRFIINNDAVITRARLALVQGVVSVLASGLAVLGVHAPNEM 596 >gi|39935919|ref|NP_948195.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris CGA009] gi|81562421|sp|Q6N5W6|SYR_RHOPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|39649773|emb|CAE28295.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris CGA009] Length = 597 Score = 658 bits (1698), Expect = 0.0, Method: Composition-based stats. Identities = 298/589 (50%), Positives = 408/589 (69%), Gaps = 6/589 (1%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 +LFA SR+ + + + I L R+V+E P+D +HG ++TNAAM+L++ Sbjct: 9 HLFARLLSRVHAVCAALIEEGALPAGIDLSRVVVEPPKDASHGDMATNAAMVLAKDAKAK 68 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A+ I +++ + +D V IAG GFINL L P+ + L +++ +G YGR+ +G G Sbjct: 69 PRDLADKIADKLRAEELIDQVAIAGPGFINLTLKPAVWAEALRAVLDAGAGYGRSTVGGG 128 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KVN+E+VSANPTGPMHVGHCR AV GD LA+L+ +GY+VTREYYINDAGAQ++ LA S Sbjct: 129 EKVNVEYVSANPTGPMHVGHCRGAVFGDALANLLDTAGYDVTREYYINDAGAQVDVLARS 188 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 F RY++AL ++PEG YPG YLK VG+ L ++ + L + PE +WLP V+ ++ Sbjct: 189 AFLRYREALGETIGEIPEGLYPGDYLKPVGEALKAEHGAALKDMPEAQWLPTVRATAIAM 248 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM+ I+ DL ALNI H++F SE G + + + I+ L +G VY+G LPPPK + Sbjct: 249 MMEAIKGDLAALNITHEVFFSERSLIEGGRNRVAETIEFLRAKGDVYQGRLPPPKGAPVE 308 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + DR+Q LFR+T GDDVDRPLLKSDGSYTYFA+D+AY K K++ GF NM+ V G+DH Sbjct: 309 DYE-DREQTLFRATAYGDDVDRPLLKSDGSYTYFASDIAYHKVKFDAGFANMVDVWGADH 367 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY+KR++A AV+ K ++V + +LVRL R+G P+KMSKRAGDF+TLR VVDEVGSD Sbjct: 368 GGYIKRMQAAIQAVTAGKGALDVKIVQLVRLLRNGEPVKMSKRAGDFVTLREVVDEVGSD 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +VRFMML+RKN +LDFD KV EQSK+NPVFYVQY +AR SIFR A+++ PDL D Sbjct: 428 AVRFMMLFRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGHSIFRNAREVVPDLPEDSK 487 Query: 481 PRNV----IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 R P E D +EL+L+ LA YPR++E A A EP+++AFYL +LAS FH W Sbjct: 488 ARAAMLRQAPLERLNDPAELELLKRLALYPRIVEAAAQAHEPHRIAFYLNELASEFHALW 547 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +HGR+ P LRF+ N+ ++T RL +V V S++ SGL I+GV +P+EM Sbjct: 548 THGRDLPHLRFIINNDAEITRARLAMVQGVVSVLASGLAILGVTAPDEM 596 >gi|90419380|ref|ZP_01227290.1| arginyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1] gi|90336317|gb|EAS50058.1| arginyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1] Length = 583 Score = 657 bits (1696), Expect = 0.0, Method: Composition-based stats. Identities = 315/586 (53%), Positives = 410/586 (69%), Gaps = 5/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +FADF SR+K ++ + + L R+ +E PRD AHG L+TNAAM+L++PLGL Sbjct: 1 MNIFADFESRVKAAVEAVLSDSENGVPDLARVTVEPPRDAAHGDLATNAAMVLAKPLGLK 60 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A I A + DPDV++ IAG GFINL L + L+ I+ +G ++GR G Sbjct: 61 PRDLATRIAAHLARDPDVETAEIAGPGFINLKLRQPFWIAHLAGILAAGGDFGRAPAT-G 119 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +VN+E+VSANPTGPMHVGHCR AVVGD +ASLMAF G EVT EYYINDAG Q+N LA S Sbjct: 120 RRVNVEYVSANPTGPMHVGHCRGAVVGDAVASLMAFGGDEVTTEYYINDAGEQVNVLARS 179 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 RY++AL ++P G YPG YLK VG++LA ++ LL E +WLP+V++ ++ A Sbjct: 180 ALLRYREALGETIDEIPAGLYPGEYLKPVGEKLASEFGDRLLAMDEAEWLPLVRERAIDA 239 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM +IR DLK L I+ D+F SE H + I I +L +G+VY+G LPPPK + + Sbjct: 240 MMAMIRADLKLLGIEQDVFFSERTLHDDNGGKIAAAIADLRERGFVYQGSLPPPKGQLPE 299 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + DR+Q L RST VGDD DRPL+KSDG YTYFAAD+AYF K+ERGF M+YV+G+DH Sbjct: 300 DWE-DREQTLLRSTEVGDDQDRPLVKSDGRYTYFAADVAYFHDKFERGFQEMVYVLGADH 358 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GYVKRLEAVA AVS A +VLLC+LV+LYR+G P+ MSKR+G+F+TL VV+EVG D Sbjct: 359 GGYVKRLEAVARAVSGGTATADVLLCQLVKLYRNGEPVTMSKRSGNFVTLADVVEEVGRD 418 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFDL 479 VRFMML+RK+ LDFDF KV EQSK+NPVFYVQYA+AR +IFRQA + L DF Sbjct: 419 PVRFMMLFRKSDAPLDFDFQKVTEQSKDNPVFYVQYAHARSAAIFRQAVEAGLTLPDFAS 478 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 R + D E+ LI LAE+PR+I++A A+EP++LAFYLYDLAS FH ++ G Sbjct: 479 LDRETLNL--LNDEGEIGLIRKLAEFPRLIKSAADAKEPHRLAFYLYDLASSFHAQYNRG 536 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ P LRFV A+ K+T RL LV AVA ++ +GL +IGV++P EM Sbjct: 537 KDLPELRFVNADEAKITFARLALVKAVALVLATGLGLIGVDAPEEM 582 >gi|260459783|ref|ZP_05808037.1| arginyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075] gi|259034585|gb|EEW35842.1| arginyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075] Length = 585 Score = 657 bits (1695), Expect = 0.0, Method: Composition-based stats. Identities = 313/586 (53%), Positives = 420/586 (71%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVE-KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF++R+ ++ +D K K L RI +E PRD +HG L+TNAAM+L++P G Sbjct: 1 MNIFADFTARVIKAVEALDLKDKDGVSPDLSRIAVEPPRDASHGDLATNAAMVLAKPTGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A+ + ++ D DV + +AG GF+NL L + + LS+++ G YGR+ IG Sbjct: 61 NPRVLADRLALVLRDDVDVAAAEVAGPGFVNLRLKDGFWQAHLSALLGEGRNYGRSTIGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G K N+E+VSANPTGPMHVGHCR AVVGD LA++MAF+GY+VT+EY INDAG+QI+ L Sbjct: 121 GRKTNVEYVSANPTGPMHVGHCRGAVVGDALANIMAFAGYDVTKEYVINDAGSQIDVLGR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY +AL + ++P G YPG YL VG+ L ++ LL P+++ L IVKD ++ Sbjct: 181 SAFLRYSEALGEDIGEIPPGLYPGDYLVPVGEGLVKEFGRSLLQMPDDEALAIVKDRTID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL LN+ HD+F SE H + IR I++L +G++Y+G LPPPK + Sbjct: 241 AMMAMIREDLALLNVHHDVFFSERTLHADNARKIRSAINDLTLKGHIYKGKLPPPKGEKP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + DR+Q LFRST VGDD+DR L+KSDGS+TYFAAD+AY K K +RGF ++IYV+G+D Sbjct: 301 DDWE-DREQTLFRSTAVGDDMDRALVKSDGSFTYFAADVAYLKDKVDRGFVDLIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEA+A A++ ++ VLLC LV+L+RDG P++MSKR+GDF+TLR VV+EVG Sbjct: 360 HGGYVKRLEALARAIAGDDVKLTVLLCNLVKLFRDGEPVRMSKRSGDFVTLREVVEEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D +RFMML+RKN LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA + + +FD Sbjct: 420 DPIRFMMLYRKNDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQASEQLGEANFDR 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 V S D E+ LI LAEYPR+IE+A +A EP++LAFYLYDLAS FHGHW+ G Sbjct: 480 NSL-VAAVTSLTDEGEIGLIRKLAEYPRLIESAALALEPHRLAFYLYDLASSFHGHWNRG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +NP LRFV+ N+R+LT RL LV AV+ ++ SGL +IG +P EM Sbjct: 539 TDNPDLRFVKVNDRELTHARLGLVQAVSDVLTSGLTLIGAAAPTEM 584 >gi|328543964|ref|YP_004304073.1| Arginyl-tRNA synthetase ArgS [polymorphum gilvum SL003B-26A1] gi|326413708|gb|ADZ70771.1| Arginyl-tRNA synthetase ArgS [Polymorphum gilvum SL003B-26A1] Length = 589 Score = 656 bits (1694), Expect = 0.0, Method: Composition-based stats. Identities = 312/589 (52%), Positives = 414/589 (70%), Gaps = 5/589 (0%) Query: 1 MYLFADFSSRLKNYLKEIDC-KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F +F++R++ + ++ L RI +E PRD AHG L+TNAAMIL++PLG+ Sbjct: 1 MNIFVEFTARVQAAVAGLEAVAAAGPDLDLSRITVESPRDPAHGDLATNAAMILAKPLGM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +AE I A + D +V V +AG GFINL ++P+ ++L + V G ++GR+ +G Sbjct: 61 KPRDLAEQIAAALGRDDEVAEVSVAGPGFINLKVAPAVWERVLRAAVTEGSDFGRSRLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 GTKVN+E+VSANPTGPMHVGH R AV GD LA+L+A++GYEVTREYYINDAG+QI TLA Sbjct: 121 GTKVNVEYVSANPTGPMHVGHTRGAVFGDALANLLAYAGYEVTREYYINDAGSQIETLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY++AL + ++P G YPG YLK VG LA + LL+ E WLPIVKD ++ Sbjct: 181 SAFLRYREALGEDIGEIPAGLYPGDYLKPVGAALAAAHGQALLSMNEAGWLPIVKDAAIT 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHR---GDPSPIRDIIDNLARQGYVYEGILPPPKS 296 MM +IR DL+ LN+ HD+F SE H G PS I ++D L +G VYEG LPPPK Sbjct: 241 GMMDLIRADLELLNVHHDVFFSERTLHERSDGTPSQIDLMLDRLRSRGLVYEGTLPPPKG 300 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + + + DR+Q LFR+T GDD+DRPL KSDG+YTYFAAD+AYF KY+RGF+ M+YV+ Sbjct: 301 QLPEDWE-DREQTLFRATDFGDDIDRPLKKSDGTYTYFAADVAYFLSKYQRGFEEMVYVL 359 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G+DH GYVKRLEAV A+S +A + V LC+LV+L+R G P++MSKR+GDFITLR VV+E Sbjct: 360 GADHGGYVKRLEAVGKAISGGEATVIVRLCQLVKLFRAGEPVRMSKRSGDFITLRDVVEE 419 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG D VRFMML+RKN LDFDF KV EQSK+NPVFYVQY +ARC S+ RQA + PDLD Sbjct: 420 VGRDPVRFMMLFRKNDAPLDFDFQKVTEQSKDNPVFYVQYGHARCCSVLRQAGEELPDLD 479 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 + D EL LI LA +P++++ A A EP+++AF+L+DLAS H HW Sbjct: 480 LSDAALSAADLSHLRDVGELDLIAKLALWPKMVDAAAEAHEPHRIAFFLHDLASSLHAHW 539 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + G+E P+LRF+ N T+ RL LV AV+ ++ SGL ++GV++P EM Sbjct: 540 NRGKEMPQLRFINTENTGSTLARLALVRAVSLVLASGLAVLGVDAPPEM 588 >gi|209964346|ref|YP_002297261.1| arginyl-tRNA synthetase [Rhodospirillum centenum SW] gi|209957812|gb|ACI98448.1| arginyl-tRNA synthetase ArgS [Rhodospirillum centenum SW] Length = 584 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 272/586 (46%), Positives = 389/586 (66%), Gaps = 4/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F DF +++K L+E+ + + + L R+ +E PRD +HG +STNAAM+L++P G Sbjct: 1 MNVFKDFEAKIKAALEELMADGSLPQGLDLSRVTVEPPRDPSHGDVSTNAAMVLAKPAGK 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +IAE +VAR++ DV + +AG GF+NL ++P Y + LS ++V+G+ YG + +G Sbjct: 61 PPRSIAEALVARLRSVADVTAAEVAGPGFVNLRMAPDYWCRRLSDVLVAGVTYGASTMGN 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G++VN+E+VSANPTGP+H H R AVVGD LA+L+ +G+EVTREYYINDAGAQ+ L Sbjct: 121 GSRVNVEYVSANPTGPLHAAHARGAVVGDALAALLEKAGFEVTREYYINDAGAQVEVLGR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++A+ ++ +P G YPG YLK VG+ +A + L PE +WLP+++D++V Sbjct: 181 STYLRYREAVTGEEASIPAGLYPGEYLKEVGQAIARRDGDRWLTAPEAEWLPVMRDFAVG 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 +M I++DL ++NI HD+F SE + + + L Q +Y G+L PPK K Sbjct: 241 MIMGWIKEDLASMNIHHDVFTSERALVQ--SGAVDAALQTLRDQDLIYVGVLEPPKGKKP 298 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + R Q LF++T GDDVDRPL KSDGS+TYFA D+AY K RG +I V G+D Sbjct: 299 DDWE-PRPQTLFKATQFGDDVDRPLQKSDGSWTYFANDIAYHYDKARRGSPTLIDVWGAD 357 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR+EA AV+ ++V +C+LV L +G P+KMSKRAG F+TLR V++ VG Sbjct: 358 HGGYVKRMEAAVKAVTGGAGVLDVKICQLVHLLENGQPVKMSKRAGTFVTLRDVMEAVGR 417 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRF+ML R+N + L+FD+ KV EQSK+NPVFYVQYA+ARCRS+ R A++ PD D Sbjct: 418 DVVRFIMLTRRNDQTLEFDYAKVTEQSKDNPVFYVQYAHARCRSVLRHAEEAHPDWDITG 477 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + E++LI + +PR IE A A EP+++AFYLYDLAS FH W+ G Sbjct: 478 PALAGVDLARLSAPEEIELIRQMLSWPRQIEAAAEAHEPHRVAFYLYDLASAFHALWNKG 537 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++ LRF+ ++ +LT RL LV AV+ +I SGL ++GV EM Sbjct: 538 KDDATLRFLIESDPELTKARLALVKAVSIVIASGLQVMGVVPVEEM 583 >gi|192291567|ref|YP_001992172.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1] gi|192285316|gb|ACF01697.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1] Length = 592 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 300/589 (50%), Positives = 407/589 (69%), Gaps = 6/589 (1%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 +LFA SR+ + + + I L RIV+E P+D +HG ++TNAAM+L++ Sbjct: 4 HLFARLLSRVHAVCAALIEEGALPAGIDLSRIVVEPPKDASHGDMATNAAMVLAKDAKAK 63 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A+ I +++ + +D V IAG GFINL L P+ + L +++ +G YGR+ +G G Sbjct: 64 PRDLADKIADKLRAEELIDQVAIAGPGFINLTLKPAVWAEALRAVLDAGAGYGRSTVGGG 123 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KVN+E+VSANPTGPMHVGHCR AV GD LA+L+ +GY VTREYYINDAGAQ++ LA S Sbjct: 124 EKVNVEYVSANPTGPMHVGHCRGAVFGDALANLLDTAGYAVTREYYINDAGAQVDVLARS 183 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 F RY++AL ++PEG YPG YLK VG+ L +Y + L + PE +WLP V+ ++ Sbjct: 184 AFLRYREALGETIGEIPEGLYPGDYLKPVGEALKAEYGAALNDMPEAQWLPTVRATAIAM 243 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM+ I+ DL ALNI H++F SE G + + + I+ L +G VY+G LPPPK + Sbjct: 244 MMEAIKGDLAALNITHEVFFSERSLIEGGRNRVAETIEFLRAKGDVYQGRLPPPKGAPVE 303 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + DR+Q LFR+T GDDVDRPLLKSDGSYTYFA+D+AY K K++ GF NM+ V G+DH Sbjct: 304 DYE-DREQTLFRATAYGDDVDRPLLKSDGSYTYFASDIAYHKVKFDAGFANMVDVWGADH 362 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY+KR++A AV+ K ++V + +LVRL R+G P+KMSKRAGDF+TLR VVDEVGSD Sbjct: 363 GGYIKRMQAAIQAVTAGKGALDVKIVQLVRLLRNGEPVKMSKRAGDFVTLREVVDEVGSD 422 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +VRFMML+RKN +LDFD KV EQSK+NPVFYVQY +AR SIFR A+++ PDL D Sbjct: 423 AVRFMMLFRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGHSIFRNAREVVPDLPEDSK 482 Query: 481 PRNV----IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 R P E D +EL+L+ LA YPR++E A A EP+++AFYL +LAS FH W Sbjct: 483 ARAAMLRQAPLERLNDPAELELLKRLALYPRIVEAAAQAHEPHRIAFYLNELASEFHALW 542 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +HGR+ P LRF+ N+ ++T RL +V V S++ SGL I+GV +P+EM Sbjct: 543 THGRDLPHLRFIINNDAEITRARLAMVQGVVSVLASGLAILGVTAPDEM 591 >gi|83953782|ref|ZP_00962503.1| arginyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1] gi|83841727|gb|EAP80896.1| arginyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1] Length = 580 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 273/586 (46%), Positives = 389/586 (66%), Gaps = 8/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFAD S + + L + + + + D I +E PRD AHG ++TNAAM+L++P + Sbjct: 1 MNLFADIRSLVLSTLDTLVADGFLPEGLSFDAITVEPPRDAAHGDMATNAAMVLAKPARM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + ++ DP + + +AG GF+NL LS + + ++ +++ G ++GR +G+ Sbjct: 61 KPRDIAEKLAEKLGEDPRITAADVAGPGFLNLRLSAAVWQGVVGAVLGQGTDFGRGDLGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGP+HVGH R AV GD LASL+ F+G++VTREYYIND GAQ++ LA Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGFDVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + + PEG YPG YL VG L DK ++ E WL V++++ Sbjct: 181 SVYLRYLEA-HGQEVAFPEGTYPGDYLIDVGAALKDKVGDAYIDADESVWLEDVRNFATD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MMK+IRDDL +L ++ D+F SE + I ID+L +G +YEG+L PPK K Sbjct: 240 EMMKLIRDDLASLGVEMDVFYSEKSLY--GTGRIESAIDDLKAKGLIYEGVLEPPKGKKP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP++KSDG +TYFA D+AY K +RGFD +I V G+D Sbjct: 298 EDWE-PREQTLFKSTAHGDDVDRPVMKSDGGWTYFAPDIAYHYDKVQRGFDMLIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+SE +++ L +LV+L+++G KMSKRAG F+TLR VVD+VG Sbjct: 357 HGGYVKRMKAAVSALSEGAVPLDIKLTQLVKLFKNGKEFKMSKRAGTFVTLRDVVDQVGP 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN +LDFDF KV EQS+ENPVFYVQYA+AR S+ R+A + D D + Sbjct: 417 DVTRFVMLTRKNDAMLDFDFAKVLEQSRENPVFYVQYAHARVHSVLRKAAEAGVDTDMET 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 R + Q +EL+L LAE+PR++E A + EP+++AFYLY+LA FHG W+ G Sbjct: 477 LQRADLSQ--LDHEAELKLAQKLAEWPRMVETAARSNEPHRIAFYLYELAGDFHGLWNRG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P LRF+Q ++ L+ ++ L A A +I SGL I+GV+ EM Sbjct: 535 NDVPELRFLQ-DDAALSQSKIALAQAAAIVIASGLGILGVKPAEEM 579 >gi|254469368|ref|ZP_05082773.1| arginyl-tRNA synthetase [Pseudovibrio sp. JE062] gi|211961203|gb|EEA96398.1| arginyl-tRNA synthetase [Pseudovibrio sp. JE062] Length = 584 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 299/585 (51%), Positives = 404/585 (69%), Gaps = 2/585 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +FADF+ R+ + +K +D + L R+ +E PRD AHG L+TNAAM+L++ L + Sbjct: 1 MNIFADFAERVNSVVKGLDLAADAPELDLRRVTVEPPRDAAHGDLATNAAMVLAKQLKMK 60 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE I ++ D +V++V +AG GFIN+ +S + +++ +V G ++G + G G Sbjct: 61 PRDLAEKIAEGLRADSEVEAVDVAGPGFINIRVSKTLWERVIGDVVAKGDKFGASARGDG 120 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KVN+E+VSANPTGPMHVGH R AVVGD LASL+ F+GY+VTREY INDAG+QI+TLA S Sbjct: 121 LKVNVEYVSANPTGPMHVGHTRGAVVGDALASLLQFAGYDVTREYVINDAGSQIDTLANS 180 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 F RY++AL + +PEGYYPG YL VGK LA++Y L + + L ++K Y+V Sbjct: 181 AFLRYREALGEDIGQIPEGYYPGEYLIPVGKSLAEEYGESLKDMAPAERLALLKGYTVDK 240 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM +IR DL ALN++HD+F SE H G + I +D L ++ VY G LPPPK + + Sbjct: 241 MMDMIRGDLGALNVKHDVFFSEKTMH-GQGNAIDLTLDALRKRDLVYNGTLPPPKGEVPE 299 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + DR+Q LFRS+ GDD DR L+KSDGSYTYFAAD+AY + K ERGF +I+V+G+DH Sbjct: 300 DWE-DREQTLFRSSNYGDDSDRALVKSDGSYTYFAADVAYMRDKIERGFKEIIFVLGADH 358 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 +GYVKRLEA+ A+S + V LC+LV+L++ G KMSKR+G+FITLR VVDEVG D Sbjct: 359 AGYVKRLEAIGNAISGGDVDVIVRLCQLVKLFKGGAEFKMSKRSGNFITLRDVVDEVGVD 418 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +VRFMML+RKN LDFDF KVKEQSK+NPVFYVQY +ARC S+ RQA + Sbjct: 419 AVRFMMLYRKNDAQLDFDFDKVKEQSKDNPVFYVQYGHARCHSVLRQAAEELDWFSNTAE 478 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 D EL LI +A++PR+++ A EP+++AFYLY+LAS HGHWS G+ Sbjct: 479 ELQSADFAQLEDEGELALIAKMAQWPRIVDGAAENHEPHRIAFYLYELASALHGHWSRGK 538 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 E P+LRF+ +LT RL LV+AV+ +I SGLN++GV +PNEM Sbjct: 539 EKPQLRFINDKTPELTKARLALVYAVSQVIASGLNVLGVTAPNEM 583 >gi|86749867|ref|YP_486363.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris HaA2] gi|109895027|sp|Q2IWF8|SYR_RHOP2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|86572895|gb|ABD07452.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris HaA2] Length = 597 Score = 653 bits (1686), Expect = 0.0, Method: Composition-based stats. Identities = 297/589 (50%), Positives = 405/589 (68%), Gaps = 6/589 (1%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 +LFA +R+ + + + L RIV+E P+D +HG ++TNAAM+L++ Sbjct: 9 HLFAHILARVHAVCAALTDEGALPTGTDLSRIVVEPPKDASHGDMATNAAMVLAKDAKAK 68 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE I +++ + +D+V IAG GFINL L P+ + L +++ +G YGR+ +G Sbjct: 69 PRDLAEKIAEKLRAEDQIDTVSIAGPGFINLTLKPAVWAEALRAVLDAGAGYGRSRVGGA 128 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KVNIE+VSANPTGPMHVGHCR AV GD LA+L+ +GY+VTREYYINDAGAQ++ LA S Sbjct: 129 EKVNIEYVSANPTGPMHVGHCRGAVFGDALANLLETAGYDVTREYYINDAGAQVDVLARS 188 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 F RY++AL + +PEG YPG YL VG L ++ + L PE +WLP+V+ S+ Sbjct: 189 AFLRYREALGEDIGAIPEGLYPGDYLVPVGTALVAEHGAALKELPEPQWLPMVRAKSIAM 248 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM++I+ DL AL I H++F SE G+ + + D ID L +G VY+G LPPPK + Sbjct: 249 MMEMIKADLAALAITHEVFFSERSLIEGERNRVADTIDFLRAKGDVYQGRLPPPKGAPVE 308 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + DR+Q LFR+T GDDVDRPLLKSDG+YTYFA+D+AY K K++ GF NM+ V G+DH Sbjct: 309 DYE-DREQTLFRATAYGDDVDRPLLKSDGTYTYFASDIAYHKVKFDAGFGNMVDVWGADH 367 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY+KR++A AV+ K ++V + +LVRL R+G P+KMSKR+GDF+TLR VVDEVGSD Sbjct: 368 GGYIKRMQAAITAVTSGKGALDVKIVQLVRLLRNGEPVKMSKRSGDFVTLREVVDEVGSD 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL----D 476 +VRFMML+RKN +LDFD KV EQSK+NPVFYVQY +AR SIFR AK++FPDL + Sbjct: 428 AVRFMMLFRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGHSIFRNAKELFPDLPDATE 487 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 + E D SEL L+ LA +PR +E A +A EP+++AFYLYDLAS FH W Sbjct: 488 ARIAFLKDANAERLTDPSELDLLRRLALFPRTVEAAALAHEPHRVAFYLYDLASEFHALW 547 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + GR+ P LRF+ N+ ++T RL +V V S++ SGL I+GV +P+EM Sbjct: 548 TRGRDLPHLRFIINNDAEITKARLAMVQGVVSVLASGLAILGVTAPDEM 596 >gi|240850752|ref|YP_002972152.1| arginyl-tRNA synthetase [Bartonella grahamii as4aup] gi|240267875|gb|ACS51463.1| arginyl-tRNA synthetase [Bartonella grahamii as4aup] Length = 585 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 304/586 (51%), Positives = 425/586 (72%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F +F ++K ++ D K K + + L +I ++ PRD +HGHLSTNAAM+L++ +G+ Sbjct: 1 MNIFKNFEKKIKRSIELSDIKGKNGEDLDLSKITVDPPRDSSHGHLSTNAAMVLAKSIGI 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A+ I+ +K D ++++ +AG GFIN+ L+ + + + S++ SG YGR +G+ Sbjct: 61 NPRALADKIIELLKNDSSIENIDVAGPGFINIKLTKLFWQDAIKSMLESGTSYGRIPMGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGPMHVGHCR AVVGD L++L+ F+GY +T+EYYINDAG QI LA Sbjct: 121 GKRVNVEYVSANPTGPMHVGHCRGAVVGDVLSNLLQFTGYNITKEYYINDAGQQIEVLAH 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL +++PEG YPG YL +G+ LA ++ +LL +++ L +VK+ ++ Sbjct: 181 SVLLRYREALGQEINEIPEGLYPGEYLIPLGQSLAQEFGDQLLTMDKDEALSLVKERAIH 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL ALNI HDIF SE + + IR+ I++L GY+Y+G LPPPK + T Sbjct: 241 AMMTMIREDLAALNIYHDIFFSERMLYADNARAIRNTINDLTLNGYIYKGKLPPPKGQNT 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + Q LFRST VGDD DR L+KSDGSYTYFAAD+AYF+ K+ R FD MIY++G+D Sbjct: 301 EDWEPSE-QTLFRSTNVGDDQDRVLVKSDGSYTYFAADVAYFRDKFNRHFDEMIYILGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H+GYVKRLEA+A A+S KA+++V LC+LV+L+R+G P++MSKRAG F+TLR VV+EVG Sbjct: 360 HAGYVKRLEAMAKAISGDKAKLSVFLCQLVKLFRNGHPVRMSKRAGSFVTLRDVVEEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RK LDFDF KV EQSK+NP+FYVQYA ARC S+FRQA++ +F Sbjct: 420 DPVRFMMLYRKCEAPLDFDFAKVTEQSKDNPIFYVQYASARCHSVFRQAQEALHIKNFSN 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + D E+ LI L+EYPR+IE A I +EP++LAFYLYDLAS FH HW+ G Sbjct: 480 DTL-IAHLHRLTDDHEILLIRKLSEYPRIIEQAVIHKEPHRLAFYLYDLASSFHTHWNKG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 EN LRF+Q ++++L+ RL L+ AV +I++SGL IIGVE+P EM Sbjct: 539 SENLNLRFIQPDDKELSFARLGLIQAVINILSSGLTIIGVEAPIEM 584 >gi|46201881|ref|ZP_00054144.2| COG0018: Arginyl-tRNA synthetase [Magnetospirillum magnetotacticum MS-1] Length = 576 Score = 653 bits (1684), Expect = 0.0, Method: Composition-based stats. Identities = 278/585 (47%), Positives = 392/585 (67%), Gaps = 10/585 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M LF F + ++ I + ++ E PR+ AHG ++TNAAM+L++ G+ Sbjct: 1 MNLFKYFREEIIKSVEAI-----IPGLDTSKVTAEPPRETAHGDVATNAAMVLTKAAGMK 55 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE I R++ P V V +AG GFINL L+ S+ + L+ ++ +G+ YG++ +GKG Sbjct: 56 PRDLAEKIAERLRAHPAVTEVEVAGPGFINLRLADSFWYERLAEVLAAGVTYGQSEMGKG 115 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KVN+E+VSANPTGPMH+GH R AV GD LASL+ +GY+VTREYY+NDAG+Q++ LA S Sbjct: 116 HKVNVEYVSANPTGPMHIGHARGAVFGDALASLLVKAGYDVTREYYVNDAGSQVDVLARS 175 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 F RY++AL ++PEG YPG YLK G+ LA K+ L + EE+WLP ++ ++V A Sbjct: 176 AFLRYREALGEEIGEIPEGLYPGEYLKPAGQALAKKHGPALKDKSEEEWLPELRSFAVDA 235 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 M+ +I+DDL L ++HD+F+SE G +++ +D L QG +YEG+L PPK K Sbjct: 236 MLDMIKDDLAGLGVRHDVFVSERGLVEG--GKVQESLDYLNSQGLIYEGVLEPPKGKLPD 293 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + R Q LF++T GDDVDRPL KSDGS+TYFA+D+AY + KY RGF +MI V G+DH Sbjct: 294 DWEA-RPQTLFKATGFGDDVDRPLKKSDGSWTYFASDIAYHQDKYRRGFASMIDVWGADH 352 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GYVKR++A AVS+ ++V LC++V L + G P KMSKRAG F+TLR +V+ VG D Sbjct: 353 GGYVKRMQAAVKAVSQGGGDLDVKLCQMVNLLKGGQPYKMSKRAGTFVTLRDLVEAVGKD 412 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 VRF+ML RKN LDFD KV EQS++NPVFYVQYA+ARC S+ R A ++P+ Sbjct: 413 VVRFIMLTRKNDAHLDFDLDKVLEQSRDNPVFYVQYAHARCHSVMRHAAGMWPESVGHTP 472 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 +V+ D +EL LI LA +PR +E+A A EP+++AFYLY+LA+ FHG W+ G+ Sbjct: 473 GVDVL--ARLTDPAELGLIRLLAGWPRQVESAAEAHEPHRVAFYLYELAAAFHGLWNKGK 530 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ LRF+ +R++++ RL L+ AV +I SGL I GV EM Sbjct: 531 DDTSLRFLIEGDREVSLARLGLLRAVVGVIASGLGIFGVTPVEEM 575 >gi|312114440|ref|YP_004012036.1| arginyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100] gi|311219569|gb|ADP70937.1| arginyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100] Length = 585 Score = 653 bits (1684), Expect = 0.0, Method: Composition-based stats. Identities = 285/586 (48%), Positives = 394/586 (67%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F +F +R+++ L ++ + + + LD V+E PR HG L+TNAAM+L++P Sbjct: 1 MNIFQNFETRIRDILLQMQAEGMLPEDAKLDTFVVEPPRQATHGDLATNAAMVLAKPARQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +AE I A++ DPDV+ V IAG GFINL L P+ +L +++ G +YGR +G Sbjct: 61 NPKALAEAIAAKLAHDPDVEKVEIAGPGFINLTLKPAIWGDVLRTVLTQGADYGRGTLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G VN+E+VSANPTGPMHVGH R AV GD LASL+ F+G++ REYYINDAGAQ++ LA Sbjct: 121 GQPVNVEYVSANPTGPMHVGHTRGAVFGDALASLLDFAGFKPAREYYINDAGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S RY++AL + ++P G YPG YLK VG+ LA ++ L E +WLP V++ ++ Sbjct: 181 SAHLRYREALGEDIGEIPAGLYPGDYLKPVGEALAKEFGDT-LRGDEAEWLPKVRERTIA 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AM+ +IRDDL +L I+H++F SE I + ID L +G +YEG L PPK K Sbjct: 240 AMLDLIRDDLASLGIKHEVFFSERSLTANGEDKIAETIDFLKAKGLIYEGRLAPPKGKLP 299 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + DR+Q LFR+T GDDVDR L KSDGSYTYFAAD+AY K K ERGF +I V+G+D Sbjct: 300 DDWE-DREQTLFRATDFGDDVDRALKKSDGSYTYFAADMAYHKTKIERGFKTLINVLGAD 358 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+KRL A A+S +AQ++V +C+LVRL+R G P+KMSKRAG F+TLR VVDEVG+ Sbjct: 359 HGGYIKRLTAAVKALSGGEAQVDVKICQLVRLFRGGEPVKMSKRAGSFVTLREVVDEVGA 418 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 VRF+ML RKN LDFDF KV EQS +NPVFYVQYA+AR S+ +A + FPD+D Sbjct: 419 GPVRFIMLTRKNDATLDFDFEKVLEQSNDNPVFYVQYAHARACSVLGKAHEGFPDMDLSP 478 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 D +E+ + LAEYPR++E A A EP+++AFY +++A++FH W+ G Sbjct: 479 DSLAKADFSLLVDDAEVAIARKLAEYPRLVEQAAQAHEPHRVAFYAHEIAALFHSLWARG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +E P LRF+ + +TM R+ L+ A ++ S L ++GVE+ +EM Sbjct: 539 KELPHLRFMVPASSDITMARMALITGTALVLRSSLKLLGVEAISEM 584 >gi|83311628|ref|YP_421892.1| arginyl-tRNA synthetase [Magnetospirillum magneticum AMB-1] gi|109894999|sp|Q2W492|SYR_MAGMM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|82946469|dbj|BAE51333.1| Arginyl-tRNA synthetase [Magnetospirillum magneticum AMB-1] Length = 576 Score = 652 bits (1682), Expect = 0.0, Method: Composition-based stats. Identities = 278/585 (47%), Positives = 390/585 (66%), Gaps = 10/585 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M LF F + ++ I + ++ E PR+ +HG ++TNAAM+L++ G+ Sbjct: 1 MNLFKYFREEIIKSVEAIVPGLDT-----SKVTAEPPREVSHGDVATNAAMVLTKAAGMK 55 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE I ++ P V V +AG GFINL L+ S+ + L+ ++ +G YG++ +G+G Sbjct: 56 PRDLAEKIAEVLRAHPAVTGVEVAGPGFINLRLADSFWFERLAEVLAAGTAYGQSDLGRG 115 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KVN+E+VSANPTGPMH+GH R AV GD LASL+ +GY+VTREYY+NDAG+Q++ LA S Sbjct: 116 HKVNVEYVSANPTGPMHIGHARGAVFGDALASLLVKAGYDVTREYYVNDAGSQVDVLARS 175 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 F RY++AL ++PEG YPG YLK G+ LA K+ L + PEE+WLP ++ ++V A Sbjct: 176 AFLRYREALGEEIGEIPEGLYPGEYLKPAGEALAKKHGPALKDKPEEEWLPELRGFAVDA 235 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 M+ +I+ DL L ++HD+F+SE + ++D +D L +G +YEG+L PPK K Sbjct: 236 MLDMIKGDLAGLGVRHDVFVSERGLV--EAGKVQDALDYLTAKGLIYEGVLEPPKGKLPD 293 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + R Q LF++T GDDVDRPL KSDGS+TYFA+D+AY KY RGF MI V G+DH Sbjct: 294 DWEA-RPQTLFKATEFGDDVDRPLKKSDGSWTYFASDIAYHLDKYRRGFGAMIDVWGADH 352 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GYVKR++A AVSE ++V LC++V L + G P KMSKRAG F+TLR +V+ VG D Sbjct: 353 GGYVKRMQAAVKAVSEGGGDLDVKLCQMVNLLKGGQPYKMSKRAGTFVTLRDLVEAVGKD 412 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 VRF+ML RKN LDFD KV EQS++NPVFYVQYA+ARC S+ R A ++PD + Sbjct: 413 VVRFIMLTRKNDAHLDFDLDKVLEQSRDNPVFYVQYAHARCHSVMRHAAGMWPDAVGPVP 472 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 V+ D +EL LI LA +PR++E+A A EP+++AFYLYDLA+ FHG W+ G+ Sbjct: 473 GVEVLAH--LTDPAELGLIRLLAGWPRLVESAAEAHEPHRVAFYLYDLAAAFHGLWNKGK 530 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ LRF+ ++R+L++ RL L+ AV +I SGL I GV EM Sbjct: 531 DDTSLRFLIEDDRELSLARLGLLRAVVGVIASGLGIFGVAPVEEM 575 >gi|91977265|ref|YP_569924.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris BisB5] gi|91683721|gb|ABE40023.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris BisB5] Length = 597 Score = 652 bits (1682), Expect = 0.0, Method: Composition-based stats. Identities = 298/589 (50%), Positives = 404/589 (68%), Gaps = 6/589 (1%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 +LFA +R+ + + + I L RIV+E P+D +HG ++TNAAM+L++ Sbjct: 9 HLFAHVLARVHAVCAVLTDEGVLPAGINLARIVVEPPKDASHGDMATNAAMVLAKDAKAK 68 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A I +++ + + V IAG GFINL L P+ + L +++ G YGR+ +G Sbjct: 69 PRDLANKIAEKLRAEDQIAEVAIAGPGFINLTLKPAVWAQALRAVLDEGSAYGRSRVGGS 128 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KVN+E+VSANPTGPMHVGHCR AV GD LA+L+ +GY+VTREYYINDAGAQ++ LA S Sbjct: 129 EKVNVEYVSANPTGPMHVGHCRGAVFGDALANLLDAAGYDVTREYYINDAGAQVDVLARS 188 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 F RY++AL + +P+G YPG YL VG ELA ++ S L P+ +WLP+V+ S+ Sbjct: 189 AFLRYREALGEDIGAIPDGLYPGDYLVPVGAELAAEHGSALKEMPDSQWLPLVRAKSIAM 248 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM++I+ DL AL I H++F SE GD + + D ID L +G VY+G LPPPK + Sbjct: 249 MMEMIKGDLAALAITHEVFFSERSLIEGDRNRVADTIDFLRAKGDVYQGRLPPPKGAPVE 308 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + DR+Q LFR+T GDDVDRPLLKSDGSYTYFA+D+AY K K++ GF NM+ V G+DH Sbjct: 309 DYE-DREQTLFRATAYGDDVDRPLLKSDGSYTYFASDIAYHKVKFDAGFGNMVDVWGADH 367 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY+KR++A AV+E K ++V + +LVRL R+G P+KMSKRAGDF+TLR VVDEVGSD Sbjct: 368 GGYIKRMQAAITAVTEGKGALDVKIVQLVRLLRNGEPVKMSKRAGDFVTLREVVDEVGSD 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL----D 476 +VRFMML+RKN +LDFD KV EQSK+NPVFYVQY +AR SIFR A++ FPDL D Sbjct: 428 AVRFMMLFRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGHSIFRNAREAFPDLPESTD 487 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 + E D +EL L+ LA +PR +E A +A EP+++AFYLYDLAS FH W Sbjct: 488 ARIAFLKDAKTERLTDPAELDLLRRLALFPRTVEAAALAHEPHRVAFYLYDLASEFHALW 547 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + GR+ P LRF+ N+ ++T RL +V V S++ SGL ++GV +P+EM Sbjct: 548 TRGRDLPHLRFIINNDAEITKARLAMVQGVVSVLASGLAMLGVTAPDEM 596 >gi|85716513|ref|ZP_01047484.1| arginyl-tRNA synthetase, class Ic [Nitrobacter sp. Nb-311A] gi|85696702|gb|EAQ34589.1| arginyl-tRNA synthetase, class Ic [Nitrobacter sp. Nb-311A] Length = 597 Score = 652 bits (1682), Expect = 0.0, Method: Composition-based stats. Identities = 302/589 (51%), Positives = 407/589 (69%), Gaps = 6/589 (1%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 +LFAD +R+ + + + + L RIV+E P+D AHG ++TNAAM+L++ Sbjct: 9 HLFADVLARVHKACAALAEEGALPSGLDLTRIVVEPPKDAAHGDMATNAAMVLAKDAKAK 68 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE IV +++ D +++ IAG GFINL L +L ++ G YGR+ IG G Sbjct: 69 PRDLAERIVTKLRADDLIENAEIAGPGFINLTLRLPVWFDVLRDVLRDGEGYGRSAIGGG 128 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KVN+E+VSANPTGPMHVGHCR AV GD LASL++F+GY+VTREYYINDAG+Q++ LA S Sbjct: 129 EKVNVEYVSANPTGPMHVGHCRGAVFGDALASLLSFAGYDVTREYYINDAGSQVDVLARS 188 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 F RY++AL + ++P+G YPG YLK VG+ LA ++ L+ PE WLP+V+ ++ Sbjct: 189 AFLRYREALGEDIGEIPDGLYPGDYLKPVGRALAAEHGDSLVKAPEAGWLPLVRAKAIGM 248 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM++IR DL ALNI+HD+F SE G+ + + ID L +G VYEG LPPPK + Sbjct: 249 MMEMIRGDLAALNIRHDVFFSERSLIEGNADRVAETIDFLREKGDVYEGRLPPPKGAPVE 308 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + DR+Q LFR+T GDDVDRPL KSDG YTYFA+D+AY K K++RGF NM+ V G+DH Sbjct: 309 DYE-DREQTLFRATAYGDDVDRPLKKSDGGYTYFASDIAYHKTKFDRGFHNMVDVWGADH 367 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY+KR++A AV+ +A ++V + +LV+L R+G P+KMSKRAGDF+TLR VVDEVGSD Sbjct: 368 GGYIKRVQAAIKAVTSGRATLDVKIVQLVKLLRNGEPVKMSKRAGDFVTLREVVDEVGSD 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +VRFMML+RKN +LDFD KV EQSK+NPVFYVQY +AR SIFR A+++FPDL Sbjct: 428 AVRFMMLFRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGFSIFRNAREVFPDLPEADA 487 Query: 481 PR----NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 R E D +EL L+ LA YPR +E A A EP+++AFYLYDLAS FH W Sbjct: 488 ARKQFLGTADMERLSDPAELGLLRRLALYPRTVEAAAAAHEPHRIAFYLYDLASEFHTLW 547 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + GR+ P LRF+ N+ ++T RL LV V +++ SGL ++GV +P EM Sbjct: 548 TKGRDLPHLRFIINNDAQITRARLALVQGVVAVLASGLTVLGVHAPTEM 596 >gi|49475743|ref|YP_033784.1| arginyl-tRNA synthetase [Bartonella henselae str. Houston-1] gi|81647809|sp|Q6G316|SYR_BARHE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|49238550|emb|CAF27790.1| Arginyl-tRNA synthetase [Bartonella henselae str. Houston-1] Length = 585 Score = 651 bits (1681), Expect = 0.0, Method: Composition-based stats. Identities = 304/586 (51%), Positives = 425/586 (72%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F +F ++K L+ D K K + + L +I ++ PRD +HGHLSTNAAM+L++ GL Sbjct: 1 MNVFKNFEKKIKKSLESSDIKGKNGEDLDLSKITVDPPRDSSHGHLSTNAAMVLAKSTGL 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +AE I+ +K DP V+S+ +AG GFIN+ L+ + + ++ S++ GI YGR +G+ Sbjct: 61 NPRALAEKIIELLKNDPSVESINVAGPGFINIKLTKPFWQDLIKSMLEKGISYGRIPMGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G ++N+E+VSANPTGPMHVGHCR AVVGD L++L+ F GY +T+EYYINDAG QI LA Sbjct: 121 GKRINVEYVSANPTGPMHVGHCRGAVVGDVLSNLLQFVGYNITKEYYINDAGKQIEVLAH 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL +++PEG YPG YL +G+ LA ++ +LL +E+ L IVK+ ++ Sbjct: 181 SVLLRYREALGQKINEIPEGLYPGEYLIPLGQSLAQEFGDKLLTIDKEEALSIVKERAIH 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM +IR DL ALNI HDIF SE + + IR+ I++L +GY+Y+G LPPPK + T Sbjct: 241 EMMSMIRKDLAALNIYHDIFFSERMLYADNARAIRNTINDLTLKGYIYKGKLPPPKGQNT 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + +Q LFRST VGDD DR L+KSDGSYTYFAAD+AYF+ K+ R FD MIY++G+D Sbjct: 301 EDWE-PCEQTLFRSTDVGDDQDRVLIKSDGSYTYFAADVAYFRDKFNRHFDEMIYILGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H+GYVKRLEA+A A+S KA+++V LC+LV+L+R+G P++MSKRAG F+TLR VV+EVGS Sbjct: 360 HAGYVKRLEAMAKAISNDKAKLSVFLCQLVKLFRNGHPVRMSKRAGSFVTLRDVVEEVGS 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RK LDFDF KV EQSK+NP+FYVQYA ARC S+FRQA++ + Sbjct: 420 DPVRFMMLYRKCEAPLDFDFAKVTEQSKDNPIFYVQYASARCHSVFRQAQETLCIENIS- 478 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + D +E+ LI L+EYPR+IE A + +EP++LAFYLYDLAS FH HW+ G Sbjct: 479 NDKIIEHLNRLTDDNEIFLIRKLSEYPRIIEQAVVHKEPHRLAFYLYDLASSFHTHWNKG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +N LRF+Q ++R L+ RL L+ A+ +I++SGL I+G+++ EM Sbjct: 539 SDNLNLRFIQPDDRNLSFARLGLIQAIMNILSSGLAIVGIKAATEM 584 >gi|316933987|ref|YP_004108969.1| arginyl-tRNa synthetase [Rhodopseudomonas palustris DX-1] gi|315601701|gb|ADU44236.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris DX-1] Length = 592 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 297/589 (50%), Positives = 404/589 (68%), Gaps = 6/589 (1%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 +LFA SR+ + + + I L RIV+E P+D +HG ++TNAAM+L++ Sbjct: 4 HLFARLLSRVHAVCAGLIEEGALPAGIDLSRIVVEPPKDASHGDMATNAAMVLAKDAKAK 63 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A+ I +++ + +D V IAG GFINL L P+ + L +++ +G YGR+ +G G Sbjct: 64 PRDLADKIADKLRAEELIDQVAIAGPGFINLTLKPAVWAEALRAVLDAGTGYGRSAVGGG 123 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KVN+E+VSANPTGPMHVGHCR AV GD LA+L+ +G+ VTREYYINDAGAQ++ LA S Sbjct: 124 EKVNVEYVSANPTGPMHVGHCRGAVFGDALANLLDTAGFAVTREYYINDAGAQVDVLARS 183 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 F RY++AL ++PEG YPG YLK VG L ++ + L PE +WLP V+ ++ Sbjct: 184 AFLRYREALGEAIGEIPEGLYPGDYLKPVGVALKAEHGAALKELPEAQWLPTVRAKAIAM 243 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM+ I+ DL ALNI H++F SE G + + + I+ L +G VY+G LPPPK + Sbjct: 244 MMEAIKGDLAALNITHEVFFSERSLIEGGRNRVAETIEFLRAKGDVYQGRLPPPKGAPVE 303 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + DR+Q LFR+T GDDVDRPLLKSDGSYTYFA+D+AY K K++ GF NM+ V G+DH Sbjct: 304 DYE-DREQTLFRATAYGDDVDRPLLKSDGSYTYFASDIAYHKVKFDAGFANMVDVWGADH 362 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY+KR++A AV+ K ++V + +LVRL R+G P+KMSKRAGDF+TLR VVDEVG D Sbjct: 363 GGYIKRMQAAIQAVTAGKGALDVKIVQLVRLLRNGEPVKMSKRAGDFVTLREVVDEVGFD 422 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +VRFMML+RKN +LDFD KV EQSK+NPVFYVQY +AR SIFR A+++ PDL D Sbjct: 423 AVRFMMLFRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGHSIFRNAREVVPDLPEDSK 482 Query: 481 PRNV----IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 R P E D +EL+L+ LA YPR++E A A EP+++AFYL +LAS FH W Sbjct: 483 ARAAMLRQAPLERLSDPAELELLKRLALYPRIVEAAAQAHEPHRIAFYLNELASEFHALW 542 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +HGR+ P LRF+ N+ ++T RL +V V S++ SGL I+GV +P+EM Sbjct: 543 THGRDLPHLRFIINNDAEITRARLAMVQGVVSVLASGLAILGVTAPDEM 591 >gi|90424008|ref|YP_532378.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris BisB18] gi|109895028|sp|Q214X7|SYR_RHOPB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|90106022|gb|ABD88059.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris BisB18] Length = 597 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 303/589 (51%), Positives = 404/589 (68%), Gaps = 6/589 (1%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 +LFA SR+ + + + + I L RIV+E P+D +HG ++TNAAM+L++ Sbjct: 9 HLFAVMLSRVHAVCEALAAEGALPAGIDLARIVVEPPKDASHGDMATNAAMVLAKEAKAK 68 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE I +++ D V +V +AG GFINL L P + L +++ G YGR+ +G G Sbjct: 69 PRDLAEKIAEKLRADDLVAAVEVAGPGFINLTLQPKVWSEALRTVLADGAGYGRSAVGAG 128 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KVN+E+VSANPTGPMHVGHCR AV GD LASL+ F+GY+VTREYYINDAGAQ++ LA S Sbjct: 129 EKVNVEYVSANPTGPMHVGHCRGAVFGDALASLLDFAGYDVTREYYINDAGAQVDVLARS 188 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 R ++AL ++PEG YPG YLK VG+ LA +Y +LL E +WLPI + S+ Sbjct: 189 ALLRTREALGEEIGEIPEGLYPGDYLKPVGEALAAEYGDKLLAMDEAEWLPIARAKSIAM 248 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM++IR DL ALNI H+ F SE GD + ID L +G VYEG LPPPK + Sbjct: 249 MMQMIRGDLAALNITHEEFFSERSLIAGDTDRVAATIDFLRGKGDVYEGRLPPPKGAPIE 308 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + DR+Q LFR+T GDDVDRPLLKSDGSYTYFA+D+AY K K++RGF NMI V GSDH Sbjct: 309 DYE-DREQTLFRATAYGDDVDRPLLKSDGSYTYFASDIAYHKTKFDRGFRNMIDVWGSDH 367 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY+KR++A AV+ + ++V + +LV+L R+G P+KMSKR+GDF+TLR VVDEVGSD Sbjct: 368 GGYIKRVQAAIKAVTGGQGALDVKIVQLVKLLRNGEPVKMSKRSGDFVTLREVVDEVGSD 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +VRFMML+RKN +LDFD KV EQSK+N VFYVQY +AR S+FR A+++ PDL + Sbjct: 428 AVRFMMLFRKNDAVLDFDLAKVIEQSKDNAVFYVQYGHARGHSVFRNAREVVPDLPEETV 487 Query: 481 PRNVIPQ----ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 R E DT+EL L+ LA YPR++E A +A EP+++AFYLY+LAS FH W Sbjct: 488 ARAAFLADAAVERLTDTAELGLLRQLALYPRIVEAAALAHEPHRIAFYLYELASEFHALW 547 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + GR+ P LRF+ N+ ++T RL LV S++ SGL ++GV +P+EM Sbjct: 548 TRGRDLPHLRFIINNDAEITKARLALVQGAVSVLASGLAVLGVHAPDEM 596 >gi|299134946|ref|ZP_07028137.1| arginyl-tRNA synthetase [Afipia sp. 1NLS2] gi|298589923|gb|EFI50127.1| arginyl-tRNA synthetase [Afipia sp. 1NLS2] Length = 597 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 302/589 (51%), Positives = 406/589 (68%), Gaps = 6/589 (1%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 +LFAD R+ +++ + + + I L RIV+E P+D HG ++TNAAM+L++ + Sbjct: 9 HLFADILGRVHGVCRDLMTEGVLPEGIDLSRIVVEPPKDATHGDMATNAAMVLAKEAKVK 68 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A+ I +++ DP V +V +AG GFINL L + L +++ +G YGR+ +G G Sbjct: 69 PRDLADRISDKLRTDPLVLAVSVAGPGFINLTLKNEAWFEALRTVLRTGEGYGRSHVGAG 128 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KVN+E+VSANPTGPMHVGHCR AV GD LA+L+A +GY VT+EYYINDAGAQ++ LA S Sbjct: 129 EKVNVEYVSANPTGPMHVGHCRGAVFGDALATLLASAGYAVTKEYYINDAGAQVDVLARS 188 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 RY++AL ++PEG YPG YLK VG+ LA +Y +L+ PE +WLP+V+D S+ Sbjct: 189 AHLRYREALGETIGEIPEGLYPGDYLKPVGEALAREYGDKLVKQPEAEWLPLVRDKSIGM 248 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM++IR DL ALNI+HD+F SE G + I L +G VYEG LPPPK + Sbjct: 249 MMEMIRGDLAALNIKHDVFFSERSLIAGGTDQVGATIAGLRAKGDVYEGHLPPPKGAPVE 308 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + DR+Q LFR+T GDDVDRPL KSD SYTYFA+D+AY K K++RGF NM+ V G+DH Sbjct: 309 DYE-DREQTLFRATAFGDDVDRPLKKSDNSYTYFASDIAYHKNKFDRGFRNMVDVWGADH 367 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY+KR++A AV+ + +++V + +LVRL R+G P+KMSKRAGDF+TLR VVDEVGSD Sbjct: 368 GGYIKRVQAAIKAVTAGEGELDVKIVQLVRLLRNGEPVKMSKRAGDFVTLREVVDEVGSD 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +VRFMML+RKN +LDFD KV EQSK+NPVFYVQY +AR S+F+ A+ PDL D Sbjct: 428 AVRFMMLFRKNDAVLDFDLAKVLEQSKDNPVFYVQYGHARGHSVFKNARATVPDLPEDDG 487 Query: 481 PRNV----IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 R E D EL LI LA +PR +E+A +A EP+++AFYLYDLAS FH W Sbjct: 488 KRRAYLGSAEVERLNDPVELSLIRQLALFPRTLESAALAHEPHRIAFYLYDLASEFHALW 547 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + GR+ P LRF+ N+ +T RL LV V S++ SGL ++GV +PNEM Sbjct: 548 TKGRDAPHLRFIMENDAGITTARLALVQGVVSVLASGLAVLGVHAPNEM 596 >gi|260433438|ref|ZP_05787409.1| arginyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157] gi|260417266|gb|EEX10525.1| arginyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157] Length = 581 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 271/586 (46%), Positives = 394/586 (67%), Gaps = 7/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF+D R+ + L ++ + + + + D + +E PRD AHG ++TNAAM+L++P + Sbjct: 1 MNLFSDIRGRVLDALTQMQSEGALPEGLSFDNVAVEPPRDAAHGDMATNAAMVLAKPAKM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + A++ D + S +AG GF+NL L+PS + +L +++ G +YGR+ +G+ Sbjct: 61 KPRDIAETLAAKLAEDERITSAEVAGPGFLNLRLAPSVWQGVLGAVLEKGTDYGRSTMGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGP+HVGH R AV GD LASL+A+SG++VTREYYIND GAQ++ LA Sbjct: 121 GLKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLAYSGHDVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++A ++ EG YPG YL +G+ L +KY LL+ PE +WL V++++ + Sbjct: 181 SAYERYREA-NGLSPEIAEGLYPGDYLIPIGEALKEKYGDSLLDKPESEWLAEVREFATE 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DLKAL ++ D+F SE + I ++ L +G +Y+G+L PPK K Sbjct: 240 AMMDLIRADLKALGVEMDVFFSEKSLY--GTGKIEAALEALNEKGLIYQGVLEPPKGKKP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LFRST GDDVDRP+ KSDGS+TYFA D+AY K RGFD +I V G+D Sbjct: 298 EDWE-PREQTLFRSTAHGDDVDRPVKKSDGSWTYFAPDIAYHYDKVTRGFDALIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ K +++ L +LV+L+++G P KMSKRAG+F+TLR VVD+VG Sbjct: 357 HGGYVKRMKAAVSALSDGKVPLDIKLTQLVKLWKNGEPFKMSKRAGNFVTLRDVVDQVGP 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN LDFDF KV EQS+ENPVFYVQYA+AR S+ R+A + D+ + Sbjct: 417 DVTRFVMLTRKNDAPLDFDFDKVLEQSRENPVFYVQYAHARVMSVLRRAAEAGIDVSDET 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + +EL + LAE+PR++E A EP+++AFYLY+LA FH W+ G Sbjct: 477 LRGADL--AALDHPAELTVARKLAEWPRLVEIAARTNEPHRIAFYLYELAGDFHALWNRG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P LRF+Q + + ++ L AV+ +I++GL I+GV EM Sbjct: 535 NDEPALRFLQDGDVATSQSKIALARAVSVVISAGLGILGVTPAQEM 580 >gi|115524697|ref|YP_781608.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris BisA53] gi|115518644|gb|ABJ06628.1| arginyl-tRNA synthetase [Rhodopseudomonas palustris BisA53] Length = 597 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 298/589 (50%), Positives = 404/589 (68%), Gaps = 6/589 (1%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 +LFA R+ + ++ + + + + L R+V+E P+D HG ++TNAAM+L++ Sbjct: 9 HLFALMLGRVHAVCRALEGEGALPQNLDLARVVVEPPKDPTHGDMATNAAMVLAKEAKAK 68 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE I A+++ D V SV +AG GFINL L+P L +++ G YGR+ +G Sbjct: 69 PRDLAEAIAAKLRADDLVASVEVAGPGFINLTLAPKVWADALRTVLAQGARYGRSSVGAK 128 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KVN+E+VSANPTGPMHVGHCR AV GD LASL+ F+GY+VTREYYINDAGAQ++ LA S Sbjct: 129 QKVNVEYVSANPTGPMHVGHCRGAVFGDALASLLDFAGYDVTREYYINDAGAQVDVLARS 188 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 RY++AL + ++PEG YPG YLK VG+ L ++ LL PE +WLP+V+ S+ Sbjct: 189 ALLRYREALGEDIGEIPEGLYPGDYLKPVGEALKAEHGDRLLALPEAEWLPLVRAKSIAM 248 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM++IR DL ALNI H+ F SE G + + I L +G VYEG LPPPK + Sbjct: 249 MMEMIRGDLAALNITHEEFFSERSLIEGGSDRVGETIAFLRAKGDVYEGRLPPPKGAPIE 308 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + DR+Q LFR+T GDDVDRPLLKSDGSYTYFA+D+AY K K++RG+ M+ V G+DH Sbjct: 309 DYE-DREQTLFRATAYGDDVDRPLLKSDGSYTYFASDIAYHKTKFDRGYRTMVDVWGADH 367 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY+KR++A AV++ K ++V + +LV+L R+G P+KMSKR+GDF+TLR VV+EVGSD Sbjct: 368 GGYIKRVQAAIKAVTDGKGDLDVKIVQLVKLLRNGEPVKMSKRSGDFVTLREVVEEVGSD 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 + RFMML+RKN +LDFD KV EQSK+N VFYVQY +AR S+FR A+++ PDL + Sbjct: 428 ATRFMMLFRKNDAVLDFDLAKVIEQSKDNAVFYVQYGHARGHSVFRNAREVIPDLPEEAA 487 Query: 481 PRNVIPQ----ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 R Q E DT+EL L+ LA YPRV+E A +A EP+++AFYLYDLAS FH W Sbjct: 488 ARAAFLQDAAVERLTDTAELDLLRRLALYPRVVEAAALAHEPHRVAFYLYDLASEFHALW 547 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + GR+ P LRF+ N+ +T RL LV S+I SGL ++GV++P EM Sbjct: 548 TRGRDLPHLRFIINNDALITKARLALVQGAVSVIASGLAVLGVDAPTEM 596 >gi|154248165|ref|YP_001419123.1| arginyl-tRNA synthetase [Xanthobacter autotrophicus Py2] gi|238686740|sp|A7IN73|SYR_XANP2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|154162250|gb|ABS69466.1| arginyl-tRNA synthetase [Xanthobacter autotrophicus Py2] Length = 586 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 291/586 (49%), Positives = 396/586 (67%), Gaps = 2/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M ++A F+ ++ + + + + K + L R+V+E PRD +HG L+TNAAM+L++ GL Sbjct: 1 MNVYAIFADHVREAVAALVAEGIIAKDLDLARVVVEPPRDASHGDLATNAAMVLAKDAGL 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +AE I ++ V V +AG GFIN+ L ++ +L++++ G+++GR+ +G Sbjct: 61 KPRELAERIAGKLGTVAGVKKVDVAGPGFINIALDGTFWPVVLAAVLTQGLDFGRSALGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGHCR AV GD LA LM F+G+ VT+EYYINDAGAQ++ LA Sbjct: 121 GEKVNVEYVSANPTGPMHVGHCRGAVFGDALARLMDFAGFAVTKEYYINDAGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY++AL ++PEG YPG YL VG++LA + L E WLP+V+ ++ Sbjct: 181 SAFLRYREALGEAIGEIPEGLYPGDYLVPVGQKLAAAHGPALKEKSETDWLPLVRAEAIA 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM IR+DL AL I D+F SE G + I+ L G VYEG LPPPK Sbjct: 241 TMMVAIREDLAALGISFDVFFSERSLSTGAVDRVGAAIEALRASGEVYEGRLPPPKGAPI 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFRST GDDVDRPL KSDGSYTYFA D+AY K K +RGF MI V G+D Sbjct: 301 EDWE-DREQTLFRSTDFGDDVDRPLKKSDGSYTYFAGDIAYHKDKVDRGFLKMIDVWGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A AVS +A ++V L +LVRL+R G P++MSKR+G F+TLR VVDEVG Sbjct: 360 HGGYVKRMQAAVKAVSGGRATLDVELIQLVRLFRAGEPVRMSKRSGSFVTLREVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+VRFMML+RKN LDFD KV EQS+ENPVFYVQYA+AR +SI R A + F DL Sbjct: 420 DAVRFMMLFRKNDAPLDFDLAKVIEQSRENPVFYVQYAHARAKSILRNAAEEFADLPQQA 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 P D E+ L+ LA +PR++E A A+EP++++F+L++LAS FHG W+ G Sbjct: 480 ASFATAPLARLDDEGEITLLRRLASWPRLVEQAAGAREPHRISFFLHELASEFHGQWNRG 539 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ P LRF+ N+R+LT RL LVH VA+++ SGL ++GV + +EM Sbjct: 540 KDLPHLRFIIENDRELTSARLALVHGVATVLASGLKVLGVTAVDEM 585 >gi|148255782|ref|YP_001240367.1| arginyl-tRNA synthetase [Bradyrhizobium sp. BTAi1] gi|166232760|sp|A5EJW7|SYR_BRASB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|146407955|gb|ABQ36461.1| arginyl-tRNA synthetase [Bradyrhizobium sp. BTAi1] Length = 598 Score = 648 bits (1671), Expect = 0.0, Method: Composition-based stats. Identities = 301/591 (50%), Positives = 402/591 (68%), Gaps = 7/591 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 ++LFAD +R+ + + I + R+V+E PRD +HG ++TNAAM+L++ Sbjct: 8 LHLFADVLARVHAICAALAKDGNWPEGIDVSRVVVEPPRDPSHGDMATNAAMVLAKEAKA 67 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +AE I R++ D V V +AG GFINL L P + L +I+ G YGR Sbjct: 68 KPRDLAEAIAERLRADELVAKVDVAGPGFINLTLHPVVWARQLGTILRDGDAYGRIAPVV 127 Query: 120 G-TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G KVN+E+VSANPTGPMHVGHCR AV GD L SL+ F+G +VTREYYINDAGAQ++ LA Sbjct: 128 GAPKVNVEYVSANPTGPMHVGHCRGAVFGDALCSLLQFAGRDVTREYYINDAGAQVDVLA 187 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 S F RY++AL +PEG YPG YLK VG+ LA ++ L PE +WLPIV+D ++ Sbjct: 188 RSAFLRYREALGEEIGAIPEGLYPGDYLKPVGQALAAEHGDRLKAMPEAQWLPIVRDKAI 247 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 MM I+DDL ALNI+HD+F SE G + + + I+ L +G VYEG LPPPK Sbjct: 248 AMMMAEIKDDLAALNIRHDVFFSERSLIAGSTNKVAETIEFLRERGDVYEGRLPPPKGAP 307 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + + DR+QLLFR+T GDDVDRPL+KSDGSYTYFA+D+A + K+ERGF ++I V G+ Sbjct: 308 VEDWE-DREQLLFRATAYGDDVDRPLIKSDGSYTYFASDIANHRHKFERGFADLIDVFGA 366 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+KR++A AV+ +A ++V + +LV+L R+G P+KMSKR+GDF+TLR VVDEVG Sbjct: 367 DHGGYIKRMQAAVKAVTAAQAVLDVKVVQLVKLLRNGEPVKMSKRSGDFVTLREVVDEVG 426 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+VRFMML+RKN +LDFD KV EQS++NPVFYVQY +AR SIFR A+D FP L + Sbjct: 427 RDAVRFMMLYRKNDAVLDFDLAKVIEQSRDNPVFYVQYGHARGHSIFRNARDSFPSLPVE 486 Query: 479 LFPRNV----IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 R E D SE+ L+ LA YPR +E+A +A EP+++AFYLYDLAS FH Sbjct: 487 EGARLAFLRQAKLEKLADPSEIDLLKRLALYPRTVESAALAHEPHRVAFYLYDLASEFHA 546 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W+ GR+ P LRF+ ++ +LTM RL +V V S++ SGL I+GV +P+ M Sbjct: 547 LWTRGRDLPYLRFIIDDDAELTMARLAMVQGVVSVLASGLAILGVNAPDAM 597 >gi|319898837|ref|YP_004158930.1| Arginyl-tRNA synthetase [Bartonella clarridgeiae 73] gi|319402801|emb|CBI76352.1| Arginyl-tRNA synthetase [Bartonella clarridgeiae 73] Length = 588 Score = 648 bits (1671), Expect = 0.0, Method: Composition-based stats. Identities = 317/589 (53%), Positives = 427/589 (72%), Gaps = 6/589 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F +F +++K ++ D K K K + L +IV + PRD HG LSTNAAM+L++ +GL Sbjct: 1 MNVFKNFENKIKKLIELSDIKEKNGKILDLSKIVADPPRDSLHGDLSTNAAMVLAKSVGL 60 Query: 60 DPLTIAELIVARIKID---PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116 +P +AE I+ + D +D + +AG GFIN+ + S+ ++ L +++ GI YGR Sbjct: 61 NPRALAEKIIELLNNDQSFDYIDHINVAGPGFINIKFTQSFWQETLKTMIEKGISYGRTE 120 Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176 IG+G KVNIE+VSANPTGPMHVGHCR AV+GD LA+L+ F+G+EVT+EYYINDAG QI Sbjct: 121 IGQGKKVNIEYVSANPTGPMHVGHCRGAVIGDVLANLLQFTGHEVTKEYYINDAGEQIKI 180 Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236 LA SV RY++AL S++PEG YPG YL +G+ LA K+ +LL +E+ L IVK++ Sbjct: 181 LAHSVMLRYREALGQTISEIPEGLYPGEYLIPLGQSLAQKFGEKLLIIDQEEALSIVKEH 240 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 ++ +MM IIR DL ALNI HD+F SE + + IR I++L GY+Y+G LPPPK Sbjct: 241 AIDSMMAIIRKDLAALNIYHDVFFSERTLYENNAQAIRSTINDLTLSGYIYKGTLPPPKG 300 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + + + R+Q LFRST +GDD DR L+KSDGSYTYFAAD+AYF+ K+ R FD MIY++ Sbjct: 301 QNIEDWE-PREQTLFRSTDIGDDQDRALIKSDGSYTYFAADVAYFRDKFNRHFDEMIYIL 359 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G+DH+GYVKRLEAVA A+S KA + VLLC+LV+L+RDG P++MSKRAG F+TLR VV+E Sbjct: 360 GADHTGYVKRLEAVAKAISGNKATLTVLLCQLVKLFRDGQPVRMSKRAGSFVTLRDVVEE 419 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG D VRFMML+RK LDFDF KV EQSK+NP+FYVQYA ARC SIFRQ ++ F + Sbjct: 420 VGYDPVRFMMLYRKCEAPLDFDFAKVTEQSKDNPIFYVQYANARCHSIFRQTQESFLTEN 479 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 + + D SE+ LI LAEYPR+IE A I +EP++LAFYLYDLAS FHGHW Sbjct: 480 LS-NDTMIAHLDQLVDESEILLIRKLAEYPRIIEQAVIHKEPHRLAFYLYDLASHFHGHW 538 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + G +NP LRF++ +N++L++ RL L+ A+ +I++SGL IIGV++P EM Sbjct: 539 NKGNDNPNLRFIKTDNKELSLARLGLIQAIINILSSGLTIIGVKAPTEM 587 >gi|304391801|ref|ZP_07373743.1| arginyl-tRNA synthetase [Ahrensia sp. R2A130] gi|303296030|gb|EFL90388.1| arginyl-tRNA synthetase [Ahrensia sp. R2A130] Length = 587 Score = 648 bits (1671), Expect = 0.0, Method: Composition-based stats. Identities = 304/586 (51%), Positives = 401/586 (68%), Gaps = 4/586 (0%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 +F DF R+ N L+ + ++ + R+ +E PRD +HG L+TNAAMIL++P+ +P Sbjct: 3 NVFQDFEQRITNVLQALPDVVE-SGADVSRLTVEPPRDLSHGDLATNAAMILAKPMKTNP 61 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +A I A ++ D DV SV IAG GFINL L + + L+ ++ G YG + G G Sbjct: 62 RALAATIAAELEKDADVASVEIAGPGFINLRLVDGFWSRELTRVLTEGRRYGADATGNGK 121 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 KVN+E+VSANPTGPMHVGHCR AVVGD +A+L+ F+GY+V REYY NDAG QI+ LA S Sbjct: 122 KVNVEYVSANPTGPMHVGHCRGAVVGDAMANLLEFAGYDVVREYYTNDAGGQIDVLARSA 181 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 F RY++AL + +PEG YPG YLK +G+ L D + LL E L IV+ ++ AM Sbjct: 182 FLRYREALGQDIGKIPEGLYPGEYLKPLGQSLVDAHGDALLTMDESDMLAIVRPAAIDAM 241 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDP--SPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M +IR DL AL + HD+F SE H G S I ++ L G VY G LPPPK Sbjct: 242 MDLIRADLAALGVHHDVFFSERSLHAGGEQGSAISKAVNRLTDMGLVYTGTLPPPKGTAP 301 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+QLLFRST VGDD+DR L KS G YTYFAAD+ YF+ K++RGF+ M++V+G+D Sbjct: 302 EDWE-DREQLLFRSTDVGDDMDRALQKSSGDYTYFAADVGYFQDKFDRGFEEMVFVLGAD 360 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR+EA+ A+SE A++ + LC+LV+L+RDG P+ MSKR+G+FITLR VVDEVG Sbjct: 361 HGGYVKRMEALGKAISEDTAKVTIRLCQLVKLFRDGEPVTMSKRSGNFITLREVVDEVGR 420 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+VRFMML+RKN LDFDF KVKEQS++NP+FYVQYA+ARC S+ RQA P+LD Sbjct: 421 DAVRFMMLYRKNDAPLDFDFAKVKEQSRDNPIFYVQYAHARCHSVLRQAARDMPNLDISA 480 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 E D E L+ LAEYPRVI+ A +QEP++L+FYLYDLA++ HG W+ G Sbjct: 481 DALRAAKTELLLDDGEDGLMRKLAEYPRVIDAAARSQEPHRLSFYLYDLAALLHGQWNKG 540 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R++ LRF+ N +LT+ RL LV AV+ II SGL IIG ++P EM Sbjct: 541 RDDVTLRFIHQENPELTLARLGLVTAVSEIIASGLAIIGADAPQEM 586 >gi|75675999|ref|YP_318420.1| arginyl-tRNA synthetase, class Ic [Nitrobacter winogradskyi Nb-255] gi|109895011|sp|Q3SRM3|SYR_NITWN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|74420869|gb|ABA05068.1| arginyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255] Length = 597 Score = 647 bits (1670), Expect = 0.0, Method: Composition-based stats. Identities = 299/589 (50%), Positives = 403/589 (68%), Gaps = 6/589 (1%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 +LFAD +R+ + + + + L RIV+E PRD +HG ++TNAAM+L++ Sbjct: 9 HLFADVLARVHRACAALAEEGALPSGLDLARIVVEPPRDASHGDMATNAAMVLAKDAKAK 68 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE IV +++ D ++S IAG GFINL L +L ++ G YGR+ IG G Sbjct: 69 PRDLAERIVTKLRADDLIESADIAGPGFINLTLKLPVWADVLRDVLRDGEGYGRSAIGAG 128 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KVN+E+VSANPTGPMHVGHCR AV GD LASL++F+GY+VTREYYINDAG+Q++ LA S Sbjct: 129 EKVNVEYVSANPTGPMHVGHCRGAVFGDALASLLSFAGYDVTREYYINDAGSQVDVLARS 188 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 F RY++AL + ++P+G YPG YLK VG+ LA + L+ PE +WL +V+ ++ Sbjct: 189 AFLRYREALGEDIGEIPDGLYPGDYLKPVGQALAAGHGDSLVKAPEAEWLGLVRAKAIGM 248 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM++IR DL ALNI+HD+F SE G + + I L +G VYEG LPPPK + Sbjct: 249 MMEMIRGDLAALNIRHDVFFSERSLIDGSADRVAETIGFLREKGDVYEGRLPPPKGAPVE 308 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + DR+Q LFR+T GDDVDRPL KSDG YTYFA+D+AY K K++RGF NM+ V G+DH Sbjct: 309 DYE-DREQTLFRATAYGDDVDRPLKKSDGGYTYFASDIAYHKTKFDRGFHNMVDVWGADH 367 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY+KR++A AV+ K ++V + +LV+L R+G P+KMSKRAGDF+TLR VV+EVGSD Sbjct: 368 GGYIKRVQAAIKAVTSGKGTLDVKIVQLVKLLRNGEPVKMSKRAGDFVTLREVVEEVGSD 427 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +VRFMML+RKN +LDFD +V EQSK+NPVFYVQY +AR SIFR A+++FPDL Sbjct: 428 AVRFMMLFRKNDAVLDFDLARVIEQSKDNPVFYVQYGHARGFSIFRNAREVFPDLPEADA 487 Query: 481 PR----NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 R E D +EL L+ LA YPR +E A A EP+++AFYLYDLAS FH W Sbjct: 488 ERRQFLGTADLERLSDPAELGLLRKLALYPRTVEAAAAAHEPHRIAFYLYDLASEFHALW 547 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + GR+ P LRF+ N+ ++T RL LV V +++ SGL ++GV +P EM Sbjct: 548 TKGRDLPHLRFIINNDAQITRARLALVQGVVAVLASGLTVLGVHAPTEM 596 >gi|121602184|ref|YP_989046.1| arginyl-tRNA synthetase [Bartonella bacilliformis KC583] gi|166232758|sp|A1USU3|SYR_BARBK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|120614361|gb|ABM44962.1| arginyl-tRNA synthetase [Bartonella bacilliformis KC583] Length = 585 Score = 647 bits (1670), Expect = 0.0, Method: Composition-based stats. Identities = 313/586 (53%), Positives = 421/586 (71%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F +F ++K LKE D K K + + L +I ++ PRD HG LSTNA+M+L++ +GL Sbjct: 1 MNVFKNFEQKIKKSLKESDIKGKNGENLDLSKITVDPPRDSLHGDLSTNASMVLAKSVGL 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P T+AE I+A +K DP +D + +AG GFIN+ L+ S+ +L ++ SG +YGR IG+ Sbjct: 61 NPRTLAEKIIALLKDDPSIDHLEVAGSGFINIKLTKSFWHDVLKLMITSGTDYGRTQIGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGPMHVGHCR AVVGD LA+L+ F+GY VT+EYYINDAG QI LA Sbjct: 121 GKQVNVEYVSANPTGPMHVGHCRGAVVGDVLANLLQFAGYNVTKEYYINDAGKQIEILAA 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL + +PEG YPG YL +G+ L ++ +LL EK L IVK+ S+ Sbjct: 181 SVLLRYREALGETINKIPEGLYPGEYLIPLGQSLVQEFGDKLLTMDNEKALSIVKERSID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL LNI HD+F SE + + IR+ I++L GYVY+G L PPK +T Sbjct: 241 AMMTMIRQDLATLNIHHDVFFSERMLYMNNAQAIRNTINDLTLNGYVYKGKLSPPKGQTL 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + +Q LFRST VGDD DR L+KSDGSYTYFAAD+AYF+ K+ R FD MIYV+G+D Sbjct: 301 EDWE-PHEQTLFRSTDVGDDQDRVLIKSDGSYTYFAADVAYFRDKFHRHFDEMIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H+GYVKRLEAVA A+S KA++ LC+LV+L+R+G P++MSKR G FITLR VV EVG Sbjct: 360 HAGYVKRLEAVAKAISGNKAKLTAFLCQLVKLFRNGHPVRMSKREGSFITLRDVVKEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RK LDFD KV EQSK+NP+FYVQYA+ARC S+FRQA++ ++ Sbjct: 420 DPVRFMMLYRKCEAPLDFDLEKVTEQSKDNPIFYVQYAHARCHSVFRQAQENLQ-IENPS 478 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + + SE+ LI LA+YPR+IE A + +EP++LAFYLYDLAS FHGHW+ G Sbjct: 479 NDLMIAHLDQLTNDSEISLIHKLAQYPRIIEQAIVYKEPHRLAFYLYDLASNFHGHWNKG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +NP LRF++ NN+KL++ RL LV A ++++SGL I+ V++P EM Sbjct: 539 NDNPELRFIKPNNKKLSLARLGLVQAFINVLSSGLKIVEVKAPTEM 584 >gi|220922162|ref|YP_002497463.1| arginyl-tRNA synthetase [Methylobacterium nodulans ORS 2060] gi|254782972|sp|B8I9T2|SYR_METNO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|219946768|gb|ACL57160.1| arginyl-tRNA synthetase [Methylobacterium nodulans ORS 2060] Length = 590 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 291/591 (49%), Positives = 394/591 (66%), Gaps = 8/591 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FA F R+ L + ++ + + L R+V+E PRD +HG L+TNAA++L++ Sbjct: 1 MNIFAAFEERIGEALASLTRAGQLPEGLDLGRVVVEPPRDPSHGDLATNAALVLAKEART 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +AE + A ++ DP V +AG GF+NL L+P ++ + + +G +GR Sbjct: 61 NPKALAERLAAELRSDPRVTEASVAGPGFLNLRLAPQVYGDVVRAALRAGEAFGRGAKQP 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G N+E+VSANPTGPMHVGH R AV GD LA+L+ +G EV REYYINDAGAQ++ LA Sbjct: 121 GLV-NVEYVSANPTGPMHVGHGRGAVFGDALANLLVAAGREVVREYYINDAGAQVDVLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY++AL +PEG YPG YLK VG LA + LL PE +WLP+V++ ++ Sbjct: 180 SAFLRYREALGEEIGTIPEGLYPGDYLKPVGAMLAKTHGRSLLGKPEAEWLPLVREAAIG 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPS-----PIRDIIDNLARQGYVYEGILPPP 294 AMM+ IR+DL AL I+HD+F SE G + +I+ L + VY G LPPP Sbjct: 240 AMMERIREDLAALGIRHDVFFSERTLQEGGKEGGEGGAVARLIEALRARDLVYVGRLPPP 299 Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354 K + + + DR Q LFRST GDD+DRPLLKSDGSYTYFA+D+AY K ERG +I Sbjct: 300 KGQLPEDWE-DRDQTLFRSTAFGDDIDRPLLKSDGSYTYFASDIAYHASKVERGATELID 358 Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414 V+G+DH GYVKR++A AVS+ +A ++V LC+LVRL R G P+KMSKRAG+F+TLR V+ Sbjct: 359 VLGADHGGYVKRMQAAVRAVSDGRASLDVKLCQLVRLLRGGEPVKMSKRAGEFVTLREVI 418 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 DEVG D VRFMML+RKN LDFD KV EQSK+NPVFYVQYA+AR S+FRQA++ FP Sbjct: 419 DEVGRDPVRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYAHARTASVFRQAREAFPG 478 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 D D+ E +++ +A+YPRV+E+A A EP++LAFYLY+LAS FH Sbjct: 479 EDLSAEALAGADLSLLTDSGEAEIMRLIAQYPRVVESAGSAHEPHRLAFYLYELASAFHS 538 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W+ G++ P+LRFV +R T+ RL LV A+ ++ SGL I+GV +P+EM Sbjct: 539 FWNKGKDLPQLRFVNQTDRMSTLSRLALVAALRGVLASGLGILGVTAPDEM 589 >gi|319405600|emb|CBI79223.1| Arginyl-tRNA synthetase [Bartonella sp. AR 15-3] Length = 588 Score = 646 bits (1668), Expect = 0.0, Method: Composition-based stats. Identities = 312/589 (52%), Positives = 427/589 (72%), Gaps = 6/589 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F +F +++K ++ D K K E+ + L +IV + PRD HG LSTNAAM+L++ +GL Sbjct: 1 MNVFNNFENKIKKLIELSDIKGKNEEILDLSKIVTDPPRDSLHGDLSTNAAMVLAKSVGL 60 Query: 60 DPLTIAELIVARIKIDPDVDSV---FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116 +P +A+ I+ I D +++ +AG GFIN+ + S+ + L S++ GI YG+ Sbjct: 61 NPRALAQKIINLINSDQSFENINHIDVAGPGFINIKFTQSFWQNALKSMIEKGISYGQIQ 120 Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176 IG+G KVNIE+VSANPTGPMHVGHCR AV+GD LA+L+ F+GYEVT+EYYINDAG QI Sbjct: 121 IGQGKKVNIEYVSANPTGPMHVGHCRGAVIGDVLANLLQFTGYEVTKEYYINDAGEQIKV 180 Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236 LA SV RY++AL S++PEG YPG YL +G+ LA K+S +LL +++ L IV ++ Sbjct: 181 LARSVMLRYREALGEKISEIPEGLYPGEYLIPLGQSLAKKFSDKLLIIDQKEALSIVAEH 240 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 ++ AMM +IR DL ALNI HD+F SE + + IR I++L GY+Y+G LPPPK Sbjct: 241 AIDAMMVMIRKDLAALNIYHDVFFSERTLYENNAQAIRSTINDLTLSGYIYKGTLPPPKG 300 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + + + R+Q LFRST +GDD DR L+KSDGSYTYFA D+AYF+ K+ R FD MIY++ Sbjct: 301 QNLEDWE-PREQTLFRSTDIGDDQDRSLIKSDGSYTYFATDVAYFRDKFNRHFDEMIYIL 359 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G+DH+GYVKRLEAVA A+S KA++ VLLC+LV+L+R G P++MSKRAG F+TLR VV+E Sbjct: 360 GADHTGYVKRLEAVAKAISGNKAKLTVLLCQLVKLFRHGRPVRMSKRAGSFVTLRDVVEE 419 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG D +RFMML+RK LDFDF KV E+SK+NP+FYVQYA+ARC SIFRQA+++F + + Sbjct: 420 VGHDPIRFMMLYRKCEVPLDFDFAKVTEKSKDNPIFYVQYAHARCHSIFRQAQEVFLNEN 479 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 + D SE+ LI LAEYPR+IE A +EP++LAFYLYDLAS FHGHW Sbjct: 480 PSNHTMTA-HLDQLIDESEILLIRKLAEYPRIIEQAVTHKEPHRLAFYLYDLASYFHGHW 538 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + G +NP LRF+ +N++L++ RL L+ A+ +I++SGL IIGV++P EM Sbjct: 539 NKGNDNPNLRFIIPDNKELSLARLGLIQAILNILSSGLTIIGVKAPTEM 587 >gi|254501189|ref|ZP_05113340.1| arginyl-tRNA synthetase [Labrenzia alexandrii DFL-11] gi|222437260|gb|EEE43939.1| arginyl-tRNA synthetase [Labrenzia alexandrii DFL-11] Length = 579 Score = 646 bits (1667), Expect = 0.0, Method: Composition-based stats. Identities = 298/579 (51%), Positives = 401/579 (69%), Gaps = 5/579 (0%) Query: 11 LKNYLKEIDCKI-KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69 +K L+ ++ + L R+V+E PRD AHG +TNAAM+L++PLG+ P +AE +V Sbjct: 1 MKKCLEALELEGPDGNAPDLSRVVVEAPRDPAHGDFATNAAMVLAKPLGMKPRDLAERLV 60 Query: 70 ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129 + DP++ +AG GFINL ++ S +KIL I+ G+ YG +KVN+E+VS Sbjct: 61 VELSKDPEITETTVAGPGFINLRVAQSVWQKILGRILAEGLGYGGTKTADPSKVNVEYVS 120 Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189 ANPTGPMHVGH R AVVGD LA+L+ F+G EV +EYYINDAG+QI+TLA S F RY++AL Sbjct: 121 ANPTGPMHVGHIRGAVVGDALANLLEFAGNEVVKEYYINDAGSQIDTLARSAFLRYREAL 180 Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249 + ++P G YPG YL VG L D++ S+L + E WLP VK+ ++ AM+++IR DL Sbjct: 181 GEDIGEIPAGLYPGDYLVPVGVALKDEFGSDLRDQDEADWLPKVKERAISAMLELIRSDL 240 Query: 250 KALNIQHDIFISEDDFHR---GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 AL ++H++F SE H + S I ++D L +G VYEG LPPPK + + + DR Sbjct: 241 AALGVEHEVFFSERSLHERSDSNGSKIDHMLDGLRAKGLVYEGTLPPPKGQVPEDWE-DR 299 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366 +Q LFR++ GDD DR L KSDGSYTYFAAD+AYF+ K++RGF IYV+G+DH GY KR Sbjct: 300 EQTLFRASDYGDDTDRALKKSDGSYTYFAADVAYFEDKFKRGFKEAIYVLGADHGGYAKR 359 Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 L+AV AVS ++ V C+LV+L RDG P+KMSKR+GDFITLR VVDEVGSD VRFMM Sbjct: 360 LQAVGKAVSGGDTEVIVRFCQLVKLMRDGAPVKMSKRSGDFITLREVVDEVGSDPVRFMM 419 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 L+RKN LDFDF KV EQSK+NPVFYVQY +ARC S+ RQA + D Sbjct: 420 LFRKNDAPLDFDFKKVTEQSKDNPVFYVQYGHARCCSVLRQAAEELSGQDLGDSVLASAD 479 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 DT EL+LI +AE+P+V+E A EP+++AFYL++LAS HGHW+ G+E P LR Sbjct: 480 YSLLDDTGELELIGKMAEWPKVVEAAADTHEPHRIAFYLHELASSLHGHWNRGKELPHLR 539 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 F+ ++N KLT+ R+ LV AV+ +++SGL I+GV++P EM Sbjct: 540 FIDSSNTKLTVARVALVRAVSLVLSSGLAILGVQAPEEM 578 >gi|254486265|ref|ZP_05099470.1| arginyl-tRNA synthetase [Roseobacter sp. GAI101] gi|214043134|gb|EEB83772.1| arginyl-tRNA synthetase [Roseobacter sp. GAI101] Length = 580 Score = 646 bits (1667), Expect = 0.0, Method: Composition-based stats. Identities = 271/586 (46%), Positives = 387/586 (66%), Gaps = 8/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFAD + + + L + + + + + D I +E PRD AHG ++TNAAM+L++P GL Sbjct: 1 MNLFADIRTLVLSALDALVAEGFLPEGLNFDAIAVEPPRDAAHGDMATNAAMVLAKPAGL 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + ++ D + S +AG GF+NL L+PS + I+ +++ G ++GR +GK Sbjct: 61 KPREIAERLAVKLVDDARISSADVAGPGFLNLRLAPSVWQGIVGAVLAEGTDFGRGDLGK 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGP+HVGH R AV GD LASL+ F+G++VTREYYIND GAQ++ LA Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGWDVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + + P+G YPG YL VG+ L K ++ E WL V++++ + Sbjct: 181 SVYLRYLEA-HGQEVAFPDGTYPGDYLIGVGEALKAKVGDAYIDQDESVWLEDVRNFATE 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MMK+IRDDL +L ++ D+F SE + I I++L +G +YEG+L PPK K Sbjct: 240 EMMKLIRDDLASLGVEMDVFYSEKSLY--GTGKIEAAIEDLKSKGLIYEGVLEPPKGKLP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP++KSDG +TYFA D+AY K +RGFD +I V G+D Sbjct: 298 EDWE-PREQTLFKSTAHGDDVDRPVMKSDGGWTYFAPDIAYHYDKVQRGFDMLIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S +++ L +LV+L++DG KMSKRAG F+TLR VVD+VGS Sbjct: 357 HGGYVKRMKAAVSALSGGTVPLDIKLTQLVKLFKDGKEFKMSKRAGTFVTLRDVVDQVGS 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN +LDFDF KV EQS+ENPVFYVQYA+AR S+ R+A + D Sbjct: 417 DVTRFVMLTRKNDAMLDFDFAKVLEQSRENPVFYVQYAHARVNSVLRKAAEAGVATDLAA 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + +EL+L LAE+PR++E A + EP+++AFYLY+LA FHG W+ G Sbjct: 477 LQAADLGL--LDHEAELKLAAKLAEWPRLVETAARSNEPHRVAFYLYELAGDFHGLWNRG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P LRF+Q ++ ++ ++ L A A +I SGL I+GV EM Sbjct: 535 NDVPSLRFLQ-DDAAVSQAKIALAKATAIVIASGLGILGVTPAEEM 579 >gi|126729733|ref|ZP_01745546.1| Arginyl-tRNA synthetase, class I [Sagittula stellata E-37] gi|126709852|gb|EBA08905.1| Arginyl-tRNA synthetase, class I [Sagittula stellata E-37] Length = 580 Score = 643 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 278/586 (47%), Positives = 381/586 (65%), Gaps = 8/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFAD + + + + + + + + D + E PRD AHG ++TNAAM+L++P G Sbjct: 1 MNLFADIRALVLDAITTLVTEGVLPDGLNTDAVTTEPPRDPAHGDMATNAAMVLAKPAGK 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + ++ DP V S +AG GF+NL L PS + + +I+ G YGR+ +GK Sbjct: 61 KPRDIAEALAVKLADDPRVASAEVAGPGFLNLRLEPSVWQALPKAILGGGTAYGRSDMGK 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVNIE+VSANPTGPMHVGH R A+VGD +ASL+A++GY+VTREYYIND GAQ++ LA Sbjct: 121 GEKVNIEYVSANPTGPMHVGHARGAIVGDAMASLLAYAGYDVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RYQ+A ++ D PEG YPG YL VG+ L DK L PE+ WLP V++++ Sbjct: 181 SVYLRYQEA-HDLSVDWPEGSYPGDYLIPVGEALKDKVGDVWLEAPEKVWLPEVREFATA 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IRDDL AL + D+F SE + I ID L G +Y G+LP PK K Sbjct: 240 AMMALIRDDLAALGVHMDVFFSEKSLY--GTGRIEAAIDALKEMGLIYWGVLPKPKGKAE 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + +R+Q LF+ST GDD DRP++K+DGS+ YFA D+AY K +RGFD +I + G+D Sbjct: 298 EDWE-EREQWLFKSTDFGDDEDRPVMKADGSWAYFAPDIAYHYDKVQRGFDLLINIFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRL+AV A+S+ + +++ L +LV+L+++G P KMSKRAG FITLR +VDEVG+ Sbjct: 357 HGGYVKRLKAVVKALSQDRVPLDIKLIQLVKLFKNGAPFKMSKRAGTFITLRDLVDEVGA 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF ML RK+ LDFDF KV EQSKENPVFYVQYA+AR S+ R+A +D Sbjct: 417 DVARFHMLTRKSDATLDFDFDKVVEQSKENPVFYVQYAHARICSVLRKAG--AEGIDVSD 474 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 +EL L LAE+PR++E A EP+++A YL +LA+ HG W+ G Sbjct: 475 ATLAAQDLSGMTHPAELHLAAKLAEWPRLVEIAARTHEPHRVATYLGELAADLHGLWNRG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P LRF+Q ++ T ++ L A A +I++GL I+GV EM Sbjct: 535 NDEPALRFLQ-DDPVATQSKIALARATAVVISAGLGILGVTPVEEM 579 >gi|163852810|ref|YP_001640853.1| arginyl-tRNA synthetase [Methylobacterium extorquens PA1] gi|254782971|sp|A9W7L3|SYR_METEP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|163664415|gb|ABY31782.1| arginyl-tRNA synthetase [Methylobacterium extorquens PA1] Length = 585 Score = 643 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 281/587 (47%), Positives = 399/587 (67%), Gaps = 5/587 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FA F +R++ L+ + ++ + + L R+V+E PRD +HG L+TNAA++L++ Sbjct: 1 MNIFALFETRVREALESLTRSGRLPEGLDLSRVVVEPPRDASHGDLATNAALVLAKEAKQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P + E + ++ DP + +AG GFINL L+P + ++ + + G +GR Sbjct: 61 NPKALGEALAEELRTDPRIVEASVAGPGFINLRLAPEVFQDVIRAALSEGENFGRGQ-MP 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G VNIE+VSANPTGPMHVGH R AV GD LA+L+A +G VTREYYINDAGAQ++ LA Sbjct: 120 GGPVNIEYVSANPTGPMHVGHGRGAVFGDALANLLAAAGRPVTREYYINDAGAQVDVLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++AL +PEG YPG YLK VG LA+ + LL+ PE +WLP V+ +++ Sbjct: 180 SAYLRYREAL-GETITIPEGLYPGDYLKPVGMRLAETHGRTLLDQPEHEWLPQVRRFAID 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL A+ I+HD+F SE + + +++D L ++G VYEG LPPPK + Sbjct: 239 AMMAMIREDLAAIGIRHDVFFSEATLQGENGGKVAELLDALRQKGLVYEGRLPPPKGQLP 298 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + DR+Q LFRS+ GDDVDR LLKSDGS+TYFA+D+AY + K+ RG + +I V+G+D Sbjct: 299 DDWE-DREQTLFRSSQFGDDVDRALLKSDGSFTYFASDIAYHRDKWLRGANELIDVLGAD 357 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A AVS+ +A+++V LC+LVRL R G P+KMSKRAG+F+TLR V+DEVG Sbjct: 358 HGGYVKRMQAAVKAVSDGQARLDVKLCQLVRLLRAGEPVKMSKRAGEFVTLRDVIDEVGR 417 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D++RFMML+RKN LDFD KV EQSK+NPVFYVQY +AR S+ RQA++ P DF Sbjct: 418 DAIRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYGHARRFSVLRQAREALPGEDFSP 477 Query: 480 FP-RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 D E++++ +A+YPRV+E+A A EP+++AFYLY+ AS H W+ Sbjct: 478 AALLADADLSVLTDPGEIEMMRLIAQYPRVLESAAAAHEPHRIAFYLYETASSLHSFWNK 537 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G++ P+LR V +R T RL LV A+ ++ SGL ++GV +PNEM Sbjct: 538 GKDLPQLRIVNPTDRNSTRARLALVEALGGVLASGLAVLGVSAPNEM 584 >gi|218531636|ref|YP_002422452.1| arginyl-tRNA synthetase [Methylobacterium chloromethanicum CM4] gi|254782970|sp|B7KWG7|SYR_METC4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|218523939|gb|ACK84524.1| arginyl-tRNA synthetase [Methylobacterium chloromethanicum CM4] Length = 585 Score = 642 bits (1657), Expect = 0.0, Method: Composition-based stats. Identities = 281/587 (47%), Positives = 399/587 (67%), Gaps = 5/587 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FA F +R++ L+ + ++ + + L R+V+E PRD +HG L+TNAA++L++ Sbjct: 1 MNIFALFETRVREALESLTRSGRLPEGLDLSRVVVEPPRDASHGDLATNAALVLAKEAKQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P + E + ++ DP + +AG GFINL L+P + ++ + + G +GR Sbjct: 61 NPKALGEALAEELRTDPRIVEASVAGPGFINLRLAPEVFQDVIRAALSEGENFGRGQ-MP 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G VNIE+VSANPTGPMHVGH R AV GD LA+L+A +G VTREYYINDAGAQ++ LA Sbjct: 120 GGPVNIEYVSANPTGPMHVGHGRGAVFGDALANLLAAAGRPVTREYYINDAGAQVDVLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++AL +PEG YPG YLK VG LA+ + LL+ PE +WLP V+ +++ Sbjct: 180 SAYLRYREAL-GETITIPEGLYPGDYLKPVGMRLAETHGRALLDQPEHEWLPQVRRFAID 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL A+ I+HD+F SE + + +++D L ++G VYEG LPPPK + Sbjct: 239 AMMAMIREDLAAIGIRHDVFFSEATLQGENGGKVAELLDALRQKGLVYEGRLPPPKGQLP 298 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + DR+Q LFRS+ GDDVDR LLKSDGS+TYFA+D+AY + K+ RG + +I V+G+D Sbjct: 299 DDWE-DREQTLFRSSQFGDDVDRALLKSDGSFTYFASDIAYHRDKWLRGANELIDVLGAD 357 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A AVS+ +A+++V LC+LVRL R G P+KMSKRAG+F+TLR V+DEVG Sbjct: 358 HGGYVKRMQAAVKAVSDGQARLDVKLCQLVRLLRAGEPVKMSKRAGEFVTLRDVIDEVGR 417 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D++RFMML+RKN LDFD KV EQSK+NPVFYVQY +AR S+ RQA++ P DF Sbjct: 418 DAIRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYGHARRFSVLRQAREALPGEDFSP 477 Query: 480 FP-RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 D E++++ +A+YPRV+E+A A EP+++AFYLY+ AS H W+ Sbjct: 478 AALLADADLSVLTDPGEIEMMRLIAQYPRVLESAAAAHEPHRIAFYLYETASSLHSFWNK 537 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G++ P+LR V +R T RL LV A+ ++ SGL ++GV +PNEM Sbjct: 538 GKDLPQLRIVNPTDRNSTRARLALVEALGGVLASGLAVLGVSAPNEM 584 >gi|319407165|emb|CBI80804.1| Arginyl-tRNA synthetase [Bartonella sp. 1-1C] Length = 588 Score = 641 bits (1654), Expect = 0.0, Method: Composition-based stats. Identities = 315/589 (53%), Positives = 423/589 (71%), Gaps = 6/589 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F +F +++K ++ D K K + + L +IV + PRD HG LSTNAAM+L++ +GL Sbjct: 1 MNVFKNFENKIKKLIESSDIKGKNGEILDLSKIVADPPRDSLHGDLSTNAAMVLAKSVGL 60 Query: 60 DPLTIAELIVARIKID---PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116 P +AE I+ + D D+D + IAG GFIN+ S+ + L S++ GI YG+ Sbjct: 61 SPRALAEKIIKLLNSDQSVSDIDHIDIAGPGFINIKFKQSFWQNALKSMIEKGISYGQIE 120 Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176 IG+G K+NIE+VSANPTGPMHVGHCR AV+GD LA+L+ F+GYEVT+EYYINDAG QI Sbjct: 121 IGQGKKINIEYVSANPTGPMHVGHCRGAVIGDVLANLLQFAGYEVTKEYYINDAGEQIKI 180 Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236 LA SV RY+QAL S++PEG YPG YL +G+ LA K+ +LL +E+ L I++++ Sbjct: 181 LARSVMLRYRQALGQIISEIPEGLYPGEYLIPLGQSLAKKFGDKLLIIDQEEALSIIQEH 240 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 ++ AMM IR DL ALNI HD+F SE + + IR I +L GY+Y+G LPPPK Sbjct: 241 AIDAMMATIRKDLAALNIYHDVFFSERTLYENNAQAIRSTITDLTLSGYIYKGTLPPPKG 300 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 K + + R+Q LFRST VGDD DR L+KSD SYTYFAAD+AYF+ K+ R FD MIY++ Sbjct: 301 KNIEDWE-PREQTLFRSTDVGDDQDRALIKSDNSYTYFAADVAYFRDKFNRHFDEMIYIL 359 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G+DH+GYVKRLEAVA A+S K ++ VLLC+LV+L+RDG P++MSKRAG F+TLR VV+E Sbjct: 360 GADHTGYVKRLEAVAKAISGNKVKLTVLLCQLVKLFRDGQPVRMSKRAGSFVTLRDVVEE 419 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG D VRFMML+RK LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA+++F + Sbjct: 420 VGRDPVRFMMLYRKCEAPLDFDFAKVTEQSKDNPVFYVQYAHARCHSVFRQAQEVFLTEN 479 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 + + D +E+ LI L EYPR+IE A I +EP++LAFYLYDLAS FHGHW Sbjct: 480 PSNSTM-IAHLDQLVDENEILLIRKLTEYPRIIEQAVIYKEPHRLAFYLYDLASNFHGHW 538 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + G +NP LRF++ +N++L++ RL L+ A+ +I++SGL IIGV++ EM Sbjct: 539 NKGNDNPNLRFIKPDNKELSLARLGLIQAIINILSSGLTIIGVKALTEM 587 >gi|163746495|ref|ZP_02153853.1| arginyl-tRNA synthetase [Oceanibulbus indolifex HEL-45] gi|161380380|gb|EDQ04791.1| arginyl-tRNA synthetase [Oceanibulbus indolifex HEL-45] Length = 581 Score = 641 bits (1654), Expect = 0.0, Method: Composition-based stats. Identities = 271/587 (46%), Positives = 388/587 (66%), Gaps = 9/587 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFA+ + L+++ + + + D I E PRD AHG ++TNAAM+L++P GL Sbjct: 1 MNLFAEIRHLIIATLEQMVAQDALPATLNFDPITAEPPRDPAHGDMATNAAMVLAKPAGL 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + A+++ DP + S +AG GFINL L+PS + + ++ G ++GR ++G Sbjct: 61 KPRDIAEALAAQLQNDPRITSAEVAGPGFINLRLAPSVWQNVARQVLSQGTDFGRAILGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGP+HVGH R AV GD LASL+ F+GY+VTREYYIND GAQ++ LA Sbjct: 121 GQRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGYDVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + P+G YPG YL +G+ L+ Y +L++ PE +WL +++++ Sbjct: 181 SVYLRYLEA-NGKEVAFPDGTYPGDYLIPLGQALSKMYGDKLVDQPESEWLDDIREFASD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL +L ++ D+F SE + I I +L +G +YEG+L PPK K Sbjct: 240 AMMNLIREDLASLGVEMDVFYSEKSLY--GTGQIEAAIASLEAKGLIYEGVLEPPKGKKP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP+ KSDGS+TYFA D+AY K R FD +I V G+D Sbjct: 298 EDWE-PREQTLFKSTKHGDDVDRPVKKSDGSWTYFAPDIAYHYDKVSRDFDMLIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ +++ L +LV+LY++G P KMSKRAG F+TLR VVD+VG Sbjct: 357 HGGYVKRMKAAVSALSDGHVPLDIKLTQLVKLYKNGEPFKMSKRAGTFVTLRDVVDQVGP 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFD 478 D RF+ML RKN +LDFDF KV EQS+ENPVFYVQYA+AR SI R+A++ + D Sbjct: 417 DVTRFVMLTRKNDAMLDFDFDKVLEQSRENPVFYVQYAHARVASILRKAQEAGVKVADAT 476 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L ++ + +EL L+ LAE+PR++E A + EP+++AFYLY+LAS FH + Sbjct: 477 LRDADLTKLDH---DAELGLLRKLAEWPRLVETAARSNEPHRVAFYLYELASDFHSLYHL 533 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 GR LR +Q + + ++ L AVA +I +GL I+GV EM Sbjct: 534 GRSEDGLRALQEGDAATSQAKIALSRAVAIVIAAGLGILGVTPAQEM 580 >gi|240140137|ref|YP_002964614.1| arginyl-tRNA synthetase [Methylobacterium extorquens AM1] gi|240010111|gb|ACS41337.1| arginyl-tRNA synthetase [Methylobacterium extorquens AM1] Length = 585 Score = 641 bits (1654), Expect = 0.0, Method: Composition-based stats. Identities = 281/587 (47%), Positives = 400/587 (68%), Gaps = 5/587 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FA F +R++ L+ + ++ + + L R+V+E PRD +HG L+TNAA++L++ Sbjct: 1 MNIFALFETRVREALESLTRSGRLPEGLDLSRVVVEPPRDASHGDLATNAALVLAKEAKQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P + E++ ++ DP + +AG GFINL L+P + ++ + + G +GR Sbjct: 61 NPKALGEVLAEELRTDPRIVEASVAGPGFINLRLAPEVFQDVIRAALSEGENFGR-GHMP 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G VNIE+VSANPTGPMHVGH R AV GD LA+L+A +G VTREYYINDAGAQ++ LA Sbjct: 120 GGPVNIEYVSANPTGPMHVGHGRGAVFGDALANLLAAAGRPVTREYYINDAGAQVDVLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++AL +PEG YPG YLK VG LA+ + LL+ PE +WLP V+ +++ Sbjct: 180 SAYLRYREAL-GETITIPEGLYPGDYLKPVGMRLAETHGRALLDQPEHEWLPQVRRFAID 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL A+ I+HD+F SE + + +++D L ++G VYEG LPPPK + Sbjct: 239 AMMAMIREDLAAIGIRHDVFFSEATLQGENGGKVAELLDALRQKGLVYEGRLPPPKGQLP 298 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + DR+Q LFRS+ GDDVDR LLKSDGS+TYFA+D+AY + K+ RG + +I V+G+D Sbjct: 299 DDWE-DREQTLFRSSQFGDDVDRALLKSDGSFTYFASDIAYHRDKWLRGANELIDVLGAD 357 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A AVS+ +A+++V LC+LVRL R G P+KMSKRAG+F+TLR V+DEVG Sbjct: 358 HGGYVKRMQAAVKAVSDGQARLDVKLCQLVRLLRAGEPVKMSKRAGEFVTLRDVIDEVGR 417 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D++RFMML+RKN LDFD KV EQSK+NPVFYVQY +AR S+ RQA++ P DF Sbjct: 418 DAIRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYGHARRFSVLRQAREALPGEDFSP 477 Query: 480 FP-RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 D E++++ +A+YPRV+E+A A EP+++AFYLY+ AS H W+ Sbjct: 478 AALLADADLSVLTDPGEIEMMRLIAQYPRVLESAAAAHEPHRIAFYLYETASSLHSFWNK 537 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G++ P+LR V +R T RL LV A+ ++ SGL ++GV +PNEM Sbjct: 538 GKDLPQLRIVNPTDRNSTRARLALVEALGGVLASGLAVLGVSAPNEM 584 >gi|163868520|ref|YP_001609729.1| arginyl-tRNA synthetase [Bartonella tribocorum CIP 105476] gi|189083523|sp|A9IVK4|SYR_BART1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|161018176|emb|CAK01734.1| Arginyl-tRNA synthetase [Bartonella tribocorum CIP 105476] Length = 585 Score = 641 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 300/586 (51%), Positives = 422/586 (72%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F +F ++K ++ D K K + + L +I ++ PRD +HGHLSTNAAM+L++ +GL Sbjct: 1 MNIFKNFEKKIKKSIELSDIKGKNGEDLDLSKITVDPPRDSSHGHLSTNAAMVLAKSIGL 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +A+ I+ +K D ++++ +AG GFIN+ L+ + + + ++ G+ YGR +G+ Sbjct: 61 SPRALADKIIELLKNDISIENIDVAGPGFINIKLTKLFWQDAVKYMLELGLSYGRIPMGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G ++N+E+VSANPTGPMHVGHCR AVVGD L++L+ F+GY +T+EYYINDAG QI LA Sbjct: 121 GKRINVEYVSANPTGPMHVGHCRGAVVGDVLSNLLQFAGYNITKEYYINDAGQQIEVLAH 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL +++PEG YPG YL +G+ LA ++ +LL ++ L IVK+ ++ Sbjct: 181 SVLLRYREALGQKINEIPEGLYPGEYLIPLGQALAQEFGDQLLTMDRDEALSIVKERAIH 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM +IR+DL ALNI HDIF SE + + IR+ I++L GY+Y+G LPPPK + Sbjct: 241 TMMSMIREDLAALNIYHDIFFSERMLYADNARAIRNTINDLTLNGYIYKGKLPPPKGQNI 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + Q LFRST VGDD DR L+KSDGSYTYFAAD+AYF+ K+ R FD MIY++G+D Sbjct: 301 EDWEPSE-QTLFRSTNVGDDQDRVLIKSDGSYTYFAADVAYFRDKFNRHFDEMIYILGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H+GYVKRLEA+A A+S KA+++V LC+LV+L+R+G P++MSKRAG F+TLR VV+EVG Sbjct: 360 HAGYVKRLEAMAKAISGNKAKLSVFLCQLVKLFRNGQPVRMSKRAGSFVTLRDVVEEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RK LDFDF KV EQSK+NP+FYVQYA ARC S+FRQA+++ F Sbjct: 420 DPVRFMMLYRKCEAPLDFDFAKVTEQSKDNPIFYVQYANARCHSVFRQAQEVLHIESFS- 478 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + D +E+ LI L+EYPR+IE A + +EP++LAFYLYDLAS FH HW+ G Sbjct: 479 NDILITYLHRLIDDNEILLIRKLSEYPRIIEQAVVHKEPHRLAFYLYDLASCFHTHWNKG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 EN LRF+Q ++++L+ RL L+ AV +I++SGL+IIGVE+P EM Sbjct: 539 SENLNLRFIQPHDKELSFARLGLIQAVINILSSGLSIIGVEAPIEM 584 >gi|254562575|ref|YP_003069670.1| arginyl-tRNA synthetase [Methylobacterium extorquens DM4] gi|254269853|emb|CAX25831.1| arginyl-tRNA synthetase [Methylobacterium extorquens DM4] Length = 585 Score = 641 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 281/587 (47%), Positives = 399/587 (67%), Gaps = 5/587 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FA F +R++ L+ + ++ + + L R+V+E PRD +HG L+TNAA++L++ Sbjct: 1 MNIFALFETRVREALESLTRSGRLPEGLDLSRVVVEPPRDASHGDLATNAALVLAKEAKQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P + E + ++ DP + +AG GFINL L+P + ++ + + G +GR Sbjct: 61 NPKALGEALAEELRTDPRIVEASVAGPGFINLRLAPEVFQDVIRAALSEGENFGRGQ-MP 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G VNIE+VSANPTGPMHVGH R AV GD LA+L+A +G VTREYYINDAGAQ++ LA Sbjct: 120 GGPVNIEYVSANPTGPMHVGHGRGAVFGDALANLLAAAGRPVTREYYINDAGAQVDVLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++AL +PEG YPG YLK VG LA+ + LL+ PE +WLP V+ +++ Sbjct: 180 SAYLRYREAL-GEAITIPEGLYPGDYLKPVGVRLAETHGRALLDRPEHEWLPQVRRFAID 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL A+ I+HD+F SE + + +++D L ++G VYEG LPPPK + Sbjct: 239 AMMAMIREDLAAIGIRHDVFFSEATLQGENGGKVAELLDALRQKGLVYEGRLPPPKGQLP 298 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + DR+Q LFRS+ GDDVDR LLKSDGS+TYFA+D+AY + K+ RG + +I V+G+D Sbjct: 299 DDWE-DREQTLFRSSQFGDDVDRALLKSDGSFTYFASDIAYHRDKWLRGANELIDVLGAD 357 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A AVS+ +A+++V LC+LVRL R G P+KMSKRAG+F+TLR V+DEVG Sbjct: 358 HGGYVKRMQAAVKAVSDGQARLDVKLCQLVRLLRAGEPVKMSKRAGEFVTLRDVIDEVGR 417 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D++RFMML+RKN LDFD KV EQSK+NPVFYVQY +AR S+ RQA++ P DF Sbjct: 418 DAIRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYGHARRFSVLRQAREALPGEDFSP 477 Query: 480 FP-RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 D E++++ +A+YPRV+E+A A EP+++AFYLY+ AS H W+ Sbjct: 478 AALLADADLSVLTDPGEIEMMRLIAQYPRVLESAAAAHEPHRIAFYLYETASSLHSFWNK 537 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G++ P+LR V +R T RL LV A+ ++ SGL ++GV +PNEM Sbjct: 538 GKDLPQLRIVNPTDRNSTRARLALVEALGGVLASGLAVLGVSAPNEM 584 >gi|13471188|ref|NP_102757.1| arginyl-tRNA synthetase [Mesorhizobium loti MAFF303099] gi|23822203|sp|Q98LC0|SYR_RHILO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|14021932|dbj|BAB48543.1| arginyl-tRNA synthetase [Mesorhizobium loti MAFF303099] Length = 585 Score = 640 bits (1652), Expect = 0.0, Method: Composition-based stats. Identities = 316/586 (53%), Positives = 422/586 (72%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVE-KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FADF++R+ ++ +D K K L RI +E PRD +HG L+TNAAM+L++P G Sbjct: 1 MNIFADFTARVTKAVEALDLKDKDGISPDLSRIAVEPPRDASHGDLATNAAMVLAKPTGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +AE + ++ D DV + +AG GF+NL L + + LS+++ G YGR+ +G Sbjct: 61 NPRALAEKLALALRDDKDVAAAEVAGPGFVNLRLKDGFWQAHLSALLGDGRNYGRSTVGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G K N+E+VSANPTGPMHVGHCR AVVGD LA+LMAF+GY+VT+EY INDAG QI+ L Sbjct: 121 GRKTNVEYVSANPTGPMHVGHCRGAVVGDALANLMAFAGYDVTKEYVINDAGGQIDVLGR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL + ++P G YPG YL +G+ LA ++ LL PE++ L IVKD ++ Sbjct: 181 SVILRYREALGDEIGEIPPGLYPGDYLVPLGQALAKEFGHGLLQMPEDEALAIVKDRAID 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IRDDL LN+ HD+F SE H + IR I++L +G++Y+G LPPPK + Sbjct: 241 AMMAMIRDDLALLNVHHDVFFSERTLHADNARKIRSAINDLTLKGHIYKGKLPPPKGEKP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + DR+Q LFRST VGDD+DR L+KSDGS+TYFAAD+AY K K +RGF ++IYV+G+D Sbjct: 301 DDWE-DREQTLFRSTAVGDDMDRALVKSDGSFTYFAADVAYLKDKVDRGFVDLIYVLGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKRLEA+A A++ + ++ VLLC LV+LYRDG PI+MSKR+GDF+TLR VV+EVG Sbjct: 360 HGGYVKRLEALARAIAGDEVKLTVLLCNLVKLYRDGEPIRMSKRSGDFVTLREVVEEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D++RFMML+RK+ LDFDF KV EQSK+NPVFYVQYA ARC S+FRQA + + +FD Sbjct: 420 DAIRFMMLYRKSDAPLDFDFAKVTEQSKDNPVFYVQYASARCHSVFRQASEQLGEANFD- 478 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 S D E+ LI LAEYPR+IE+A +A EP++LAFYLYDLAS FHGHW+ G Sbjct: 479 RKSLAAAAASLTDEGEIGLIRKLAEYPRLIESAALALEPHRLAFYLYDLASSFHGHWNRG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +NP LRFV+ N+R+LT RL LV AV+ ++ SGL +IG +P EM Sbjct: 539 TDNPDLRFVKVNDRQLTHARLGLVQAVSDVLTSGLTLIGAAAPTEM 584 >gi|126462356|ref|YP_001043470.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029] gi|166232830|sp|A3PK32|SYR_RHOS1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|126104020|gb|ABN76698.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029] Length = 580 Score = 640 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 271/586 (46%), Positives = 384/586 (65%), Gaps = 8/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF + + + L + + + L + +E PRD AHG +STNAAM+L++P G Sbjct: 1 MNLFTEIRTLVTAELGAMTEAGDLPAGLDLSAVAVEPPRDPAHGDMSTNAAMVLAKPSGK 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + R+ DP + S +AG GF+NL L P+ + ++++I+ +G YGR+ IG Sbjct: 61 PPRAIAEALATRLAADPRISSAEVAGPGFLNLRLRPAVWQGMVATILQAGDTYGRSTIGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+EFVSANPTGPMHVGH R AVVGD LA L+A++G+ VTREYYIND GAQ++ LA Sbjct: 121 GQKVNVEFVSANPTGPMHVGHVRGAVVGDALARLLAYAGWNVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY++A + + ++ EG YPG YL VG+ L KY LL+ E+ WL V++++ + Sbjct: 181 SAFERYREA-HGLEPEIREGLYPGDYLIPVGEALKAKYGDSLLDKGEQHWLKEVREFATE 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM++IR+DL AL ++ D++ SE + I +D L +YEG+L PPK KT Sbjct: 240 MMMQMIREDLAALGVEMDVYSSEKALY--GTGKIEAALDRLKEMDLIYEGVLEPPKGKTP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LFRST GDDVDRP+ KSDGS+TYFA D+AY K RGFD +I + G+D Sbjct: 298 EDWE-PREQTLFRSTAHGDDVDRPVKKSDGSWTYFAPDIAYHYDKVTRGFDQLIDIFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A AA+S + +++ L +LV+L+++G P KMSKRAG ++TLR VV++VG+ Sbjct: 357 HGGYVKRMKAAVAALSAGRVPLDIKLIQLVKLWKNGEPFKMSKRAGTYVTLRDVVEQVGT 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN LDFDF KV EQSKENPVFYVQYA AR S+ R+A++ +D Sbjct: 417 DVTRFVMLTRKNDATLDFDFDKVLEQSKENPVFYVQYANARINSVLRKAREQG--MDVSD 474 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + +E+ LI LAE+PR++E A EP+++AFYL++LAS HG W+ G Sbjct: 475 ATLATADLDRLDHPAEIALIAKLAEWPRLVEIAARTNEPHRVAFYLHELASELHGLWNRG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + LRF+Q ++ ++ ++ L AV +I +GL I+GV EM Sbjct: 535 NDEAGLRFLQ-DDPVVSQAKIALARAVGVVICAGLGILGVTPVEEM 579 >gi|319404147|emb|CBI77740.1| Arginyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498] Length = 588 Score = 639 bits (1649), Expect = 0.0, Method: Composition-based stats. Identities = 312/589 (52%), Positives = 423/589 (71%), Gaps = 6/589 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F +F +++K ++ D K K + + L +IV + PRD HG LSTNAAM+L++ +GL Sbjct: 1 MNVFKNFENKIKKLIELSDIKGKNGEILDLSKIVADPPRDALHGDLSTNAAMVLAKSVGL 60 Query: 60 DPLTIAELIVARIKIDPDVDSVF---IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116 +P +AE I+ + D V + IAG GFIN+ S+ + L ++ GI YG+ Sbjct: 61 NPRALAEKIIKLLNSDQSVSDIDYINIAGPGFINIKFKQSFWQNALKLMIEKGISYGQIE 120 Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176 IG+G K+NIE+VSANPTGPMHVGHCR AV+GD LA+L+ F+GYEVT+EYYINDAG QI Sbjct: 121 IGQGKKINIEYVSANPTGPMHVGHCRGAVIGDVLANLLQFAGYEVTKEYYINDAGEQIKV 180 Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236 LA SV RY++AL S++PEG YPG YL +G+ LA K+ +LL +E+ L ++++ Sbjct: 181 LARSVMLRYREALGQTISEIPEGLYPGEYLIPLGQSLAKKFGDKLLIIDQEEALSTIQEH 240 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 ++ AMM +IR DL ALNI HD+F SE + + IR I +L GY+Y+GILPPPK Sbjct: 241 AIDAMMAMIRKDLAALNIYHDVFFSERTLYENNAQAIRSTITDLTLSGYIYKGILPPPKG 300 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 K + + R+Q LFRST +GDD DR L+KSD SYTYFAAD+AYF+ K+ R FD MIY++ Sbjct: 301 KNVEDWE-PREQTLFRSTDIGDDQDRALIKSDNSYTYFAADVAYFRDKFNRHFDEMIYIL 359 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G+DH+GYVKRLEAVA A+S KA++ VLLC+LV+L+RDG P++MSKRAG F+TLR VV+E Sbjct: 360 GADHTGYVKRLEAVAKAISGNKAKLTVLLCQLVKLFRDGQPVRMSKRAGSFVTLRDVVEE 419 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG D VRFMML+RK LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA+++F + Sbjct: 420 VGRDPVRFMMLYRKCEAPLDFDFAKVTEQSKDNPVFYVQYAHARCHSVFRQAQEVFRTEN 479 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 + + D +E+ LI L EYPR+IE A I +EP++LAFYLYDLAS FHGHW Sbjct: 480 PSNSTM-IAHLDQLVDENEILLIRKLTEYPRIIEQAVIYKEPHRLAFYLYDLASNFHGHW 538 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + G +NP LRF++ +N++L++ RL L+ A+ +I++SGL IIGV++ EM Sbjct: 539 NKGNDNPNLRFIKPDNKELSLARLGLIQAIINILSSGLTIIGVKALTEM 587 >gi|146340981|ref|YP_001206029.1| arginyl-tRNA synthetase [Bradyrhizobium sp. ORS278] gi|166232761|sp|A4YV78|SYR_BRASO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|146193787|emb|CAL77804.1| arginyl-tRNA synthetase [Bradyrhizobium sp. ORS278] Length = 598 Score = 639 bits (1649), Expect = 0.0, Method: Composition-based stats. Identities = 298/590 (50%), Positives = 403/590 (68%), Gaps = 7/590 (1%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 YLFAD +R+ + + I R+V+E PRD +HG ++TNAAM+L++ Sbjct: 9 YLFADMLARVHAICAALAKSGGWPEGIDFSRVVVEPPRDPSHGDMATNAAMVLAKEAKAK 68 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE I R++ D V V +AG GFINL L PS K L++I+ G YGR G Sbjct: 69 PRDLAEQIAERLRADELVAKVDVAGPGFINLTLQPSVWSKALATILREGAAYGRVAPVPG 128 Query: 121 -TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 KVN+E+VSANPTGPMHVGHCR AV GD L+SL+ F+G +VTREYYINDAGAQ++ LA Sbjct: 129 APKVNVEYVSANPTGPMHVGHCRGAVFGDALSSLLQFAGRDVTREYYINDAGAQVDVLAR 188 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++AL + +PEG YPG YLK VG+ L ++ +L P+ +WLPIV+D ++ Sbjct: 189 SAYLRYREALGEDIGAIPEGLYPGDYLKPVGQALKTEHGDKLKAMPDAQWLPIVRDKAIA 248 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM I+DDL ALNI+HD+F SE G + + + ID L +G VYEG LPPPK Sbjct: 249 MMMDEIKDDLAALNIRHDVFFSERSLITGGNNKVAETIDFLRERGDVYEGRLPPPKGAPV 308 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+QLLFR+T GDDVDRPL+KSDGSYTYFA+D+A + K+ERGF ++I V G+D Sbjct: 309 EDWE-DREQLLFRATAFGDDVDRPLIKSDGSYTYFASDIANHRHKFERGFADLIDVFGAD 367 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+KR++A AV+ +A ++V + +LV+L R+G P+KMSKR+GDF+TLR VVDEVG Sbjct: 368 HGGYIKRMQAAVKAVTAAQATLDVKVVQLVKLLRNGEPVKMSKRSGDFVTLREVVDEVGR 427 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+VRFMML+RKN +LDFD KV EQSK+NPVFYVQY +AR SIFR A++ P+L + Sbjct: 428 DAVRFMMLYRKNDAVLDFDLAKVIEQSKDNPVFYVQYGHARGHSIFRNARESLPELPEEE 487 Query: 480 FPRNV----IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 R E D++E L+ LA YPR +E+A +A EP+++AFYLY+LAS FH Sbjct: 488 GARIAFLREAKLERLADSAEHDLLKRLALYPRTVESAAMAHEPHRIAFYLYELASEFHAL 547 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W+ GR+ P LRF+ ++ +LT RL +V V S++ SGL I+GV +P+ M Sbjct: 548 WTRGRDLPYLRFIIDDDAELTKARLAMVQGVVSVLASGLAILGVNAPDAM 597 >gi|77463500|ref|YP_353004.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1] gi|109895030|sp|Q3J281|SYR_RHOS4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|77387918|gb|ABA79103.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1] Length = 583 Score = 639 bits (1648), Expect = 0.0, Method: Composition-based stats. Identities = 272/586 (46%), Positives = 385/586 (65%), Gaps = 8/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF + + + L + + + L + +E PRD AHG +STNAAM+L++P G Sbjct: 4 MNLFTEIRTLVTAELGAMTEAGDLPAGLDLSAVAVEPPRDPAHGDMSTNAAMVLAKPSGK 63 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P TIAE + R+ DP + S +AG GF+NL L P+ + ++++I+ +G YGR+ IG Sbjct: 64 PPRTIAEALATRLAADPRISSAEVAGPGFLNLRLRPAVWQGMVATILQAGDTYGRSTIGA 123 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+EFVSANPTGPMHVGH R AVVGD LA L+A++G+ VTREYYIND GAQ++ LA Sbjct: 124 GQKVNVEFVSANPTGPMHVGHVRGAVVGDALARLLAYAGWNVTREYYINDGGAQVDVLAR 183 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY++A + + ++ EG YPG YL VG+ L KY LL+ E+ WL V++++ + Sbjct: 184 SAFERYREA-HGLEPEIREGLYPGDYLIPVGEALKAKYGDSLLDKGEQHWLTEVREFATE 242 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM++IR+DL AL ++ D++ SE + I +D L +YEG+L PPK KT Sbjct: 243 MMMQMIREDLAALGVEMDVYSSEKALY--GTGKIEAALDRLKEMDLIYEGVLEPPKGKTP 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LFRST GDDVDRP+ KSDGS+TYFA D+AY K RGFD +I + G+D Sbjct: 301 EDWE-PREQTLFRSTAHGDDVDRPVKKSDGSWTYFAPDIAYHYDKVTRGFDQLIDIFGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A AA+S + +++ L +LV+L+++G P KMSKRAG ++TLR VV++VG+ Sbjct: 360 HGGYVKRMKAAVAALSAGRVPLDIKLIQLVKLWKNGEPFKMSKRAGTYVTLRDVVEQVGT 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN LDFDF KV EQSKENPVFYVQYA AR S+ R+A++ +D Sbjct: 420 DVTRFVMLTRKNDATLDFDFDKVLEQSKENPVFYVQYANARINSVLRKAREQG--MDVSD 477 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + +E+ LI LAE+PR++E A EP+++AFYL++LAS HG W+ G Sbjct: 478 ATLATADLDRLDHPAEIALIAKLAEWPRLVEIAARTNEPHRVAFYLHELASELHGLWNRG 537 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + LRF+Q ++ ++ ++ L AV +I +GL I+GV EM Sbjct: 538 NDEAGLRFLQ-DDPVVSQAKIALARAVGVVICAGLGILGVTPVEEM 582 >gi|49474356|ref|YP_032398.1| arginyl-tRNA synthetase [Bartonella quintana str. Toulouse] gi|81646981|sp|Q6FZH0|SYR_BARQU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|49239860|emb|CAF26254.1| Arginyl-tRNA synthetase [Bartonella quintana str. Toulouse] Length = 585 Score = 638 bits (1647), Expect = 0.0, Method: Composition-based stats. Identities = 303/586 (51%), Positives = 423/586 (72%), Gaps = 3/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F +F ++K L+ D K K + + L +I ++ PRD +HGHLSTNAAM+L++ +GL Sbjct: 1 MNVFKNFEKKIKKSLELSDIKGKNGEDLNLSKITVDPPRDSSHGHLSTNAAMVLAKSIGL 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +AE I+ +K D +D + IA GFIN+ L+ S+ + + S++ G YGR +G+ Sbjct: 61 NPHALAEKIIELLKNDSSIDCIDIAAPGFINIKLTKSFWQDAIKSMLKKGTSYGRIPMGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G ++N+E+VSANPTGPMHVGHCR AV GD L++L+ F GY +T+EYYINDAG QI LA Sbjct: 121 GKRINVEYVSANPTGPMHVGHCRGAVFGDVLSNLLQFVGYNITKEYYINDAGKQIEVLAH 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL +++PEG YPG YL +G+ LA ++S +LL +++ L IVK+ ++ Sbjct: 181 SVLLRYREALGQKINEIPEGLYPGEYLIPLGQSLAQEFSDQLLTIDKDEALSIVKERAIY 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL ALNI HDIF SE + + IR+ I++L GY+Y+G LPPPK + T Sbjct: 241 AMMSMIRKDLAALNIYHDIFFSERMLYADNARAIRNTINDLTLNGYIYKGELPPPKGQNT 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LFRST VGDD DR L+KSDGSYTYFAAD+AYF+ K+ R FD MIY++G+D Sbjct: 301 EDWE-PREQTLFRSTDVGDDQDRVLVKSDGSYTYFAADVAYFRDKFNRHFDEMIYILGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H+GYVKRLEA+A A+S A+++V LC+LV+L+R+G P++MSKRAG F+TLR VV+EVG Sbjct: 360 HAGYVKRLEAMAKAISGNSAKLSVFLCQLVKLFRNGHPVRMSKRAGSFVTLRDVVEEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML+RK LDFDF KV EQSK+NP+FYVQYA ARC S+FRQA++IF + Sbjct: 420 DPVRFMMLYRKCEAPLDFDFAKVTEQSKDNPIFYVQYASARCHSVFRQAQEIFRIENVS- 478 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + D +E+ LI L+EYPR+IE A + +EP++LAFYLYDLAS FH HW+ G Sbjct: 479 NDTMIAHLNRLTDDNEIFLIRKLSEYPRIIEQAVVHKEPHRLAFYLYDLASSFHAHWNKG 538 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +N LRF+Q ++++L+ RL L+ A+ +I++SGL I+G+E+ EM Sbjct: 539 SDNFDLRFIQPDDKELSFARLGLIQAIMNILSSGLAIVGIEAATEM 584 >gi|221639361|ref|YP_002525623.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides KD131] gi|254782980|sp|B9KSX6|SYR_RHOSK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|221160142|gb|ACM01122.1| Arginyl-tRNA synthetase [Rhodobacter sphaeroides KD131] Length = 580 Score = 638 bits (1647), Expect = 0.0, Method: Composition-based stats. Identities = 271/586 (46%), Positives = 383/586 (65%), Gaps = 8/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF + + + L + + + L + +E PRD AHG +STNAAM+L++P G Sbjct: 1 MNLFTEIRTLVTAELGAMTEAGDLPAGLDLSAVAVEPPRDPAHGDMSTNAAMVLAKPSGK 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + R+ DP + S +AG GF+NL L P+ + ++++I+ +G YGR+ IG Sbjct: 61 PPRAIAEALATRLAADPRISSAEVAGPGFLNLRLRPAVWQGMVATILKAGDTYGRSTIGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+EFVSANPTGPMHVGH R AVVGD LA L+A++G+ VTREYYIND GAQ++ LA Sbjct: 121 GQKVNVEFVSANPTGPMHVGHVRGAVVGDALARLLAYAGWNVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY++A + + ++ EG YPG YL VG+ L KY LL+ E+ WL V++++ + Sbjct: 181 SAFERYREA-HGLEPEIREGLYPGDYLIPVGEALKAKYGDSLLDKGEQHWLTEVREFATE 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM++IR+DL AL ++ D++ SE + I +D L +YEG+L PPK KT Sbjct: 240 MMMQMIREDLAALGVEMDVYSSEKALY--GTGKIEAALDRLKEMDLIYEGVLEPPKGKTP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LFRST GDDVDRP+ KSDGS+TYFA D+AY K RGFD +I + G+D Sbjct: 298 EDWE-PREQTLFRSTAHGDDVDRPVKKSDGSWTYFAPDIAYHYDKVTRGFDQLIDIFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A AA+S + +++ L +LV+L+++G P KMSKRAG ++TLR VV++VG+ Sbjct: 357 HGGYVKRMKAAVAALSAGRVPLDIKLIQLVKLWKNGEPFKMSKRAGTYVTLRDVVEQVGT 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN LDFDF KV EQSKENPVFYVQYA AR S+ R+A++ +D Sbjct: 417 DVTRFVMLTRKNDATLDFDFDKVLEQSKENPVFYVQYANARINSVLRKAREQG--MDVSD 474 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + +E+ LI LAE+PR++E A EP+++AFYL++LAS HG W+ G Sbjct: 475 ATLATADLDRLDHPAEIALIAKLAEWPRLVEIAARTNEPHRVAFYLHELASELHGLWNRG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + LRF+Q + ++ ++ L AV +I +GL I+GV EM Sbjct: 535 NDEAGLRFLQ-EDPVVSQAKIALARAVGVVICAGLGILGVTPVEEM 579 >gi|144899909|emb|CAM76773.1| Arginyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1] Length = 580 Score = 638 bits (1647), Expect = 0.0, Method: Composition-based stats. Identities = 280/585 (47%), Positives = 381/585 (65%), Gaps = 6/585 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M LF F + L +D ++ ++ E PR+ AHG ++TNAAM+LS+ G Sbjct: 1 MNLFKYFRQEIIAALSRLDLPSGLDT---SKVTAEPPREEAHGDVATNAAMVLSKAAGQK 57 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE + A+++ P V +V IAG GFINL L S+ + L+ ++ +G YG + +G Sbjct: 58 PRDLAEALAAQLRAHPAVAAVEIAGPGFINLRLVDSFWAERLAEVLQAGAAYGDSDMGGK 117 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 + +N+E+VSANPTGPMH+GH R AV+GD LASL+A +GY VTREYYINDAGAQ++ LA S Sbjct: 118 SPINVEYVSANPTGPMHIGHARGAVIGDALASLLAKAGYAVTREYYINDAGAQVDVLARS 177 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 + RY++AL ++PEG YPG YL+ GK LA + + N PE +WL + ++V A Sbjct: 178 IHLRYREALGEEIGEIPEGLYPGDYLQPAGKTLAAIHGDDFKNAPESEWLARFRLFAVDA 237 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM +IRDDL AL ++HD+F SE + + +D LA G VYEG+L PPK K Sbjct: 238 MMDMIRDDLAALGVKHDVFTSERGLV--ESGKVDAALDFLAGLGQVYEGVLEPPKGKVLD 295 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + R Q LFR+T GDDVDRPL KSDGS+TYFA+D+AY KY RGF MI + G+DH Sbjct: 296 DWE-PRPQTLFRATAFGDDVDRPLKKSDGSWTYFASDIAYHLDKYRRGFPAMIDIWGADH 354 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GYVKR++A AVSE ++V LC++V L + G P KMSKRAG F+TLR +VD+VG D Sbjct: 355 GGYVKRMQAAVKAVSEGGGDLDVKLCQMVNLMKGGQPFKMSKRAGTFVTLRDLVDQVGKD 414 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 VRF+ML RKN LDFD KV EQS++NPVFYVQYA+ARC S+ R P D Sbjct: 415 VVRFIMLTRKNDAHLDFDLDKVLEQSRDNPVFYVQYAHARCHSVLRHGVQALPGADLSAA 474 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 P D +EL +I LA +PR++E+A A EP+++AFYL D+A+ FHG W+ G+ Sbjct: 475 ALAAGPLARLTDPAELAVIKLLAGWPRLVESAAEAHEPHRVAFYLNDVAAAFHGLWNKGK 534 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ +LRF+ + +L++ R+ LV AVA +I SGL + GVE EM Sbjct: 535 DDTQLRFLIEGDAELSLARMGLVRAVADVIASGLAVFGVEPVEEM 579 >gi|332558380|ref|ZP_08412702.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides WS8N] gi|332276092|gb|EGJ21407.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides WS8N] Length = 580 Score = 638 bits (1645), Expect = 0.0, Method: Composition-based stats. Identities = 272/586 (46%), Positives = 385/586 (65%), Gaps = 8/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF + + + L + + + L + +E PRD AHG +STNAAM+L++P G Sbjct: 1 MNLFTEIRTLVIAELGAMTEAGDLPAGLDLSAVAVEPPRDPAHGDMSTNAAMVLAKPSGK 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P TIAE + R+ DP + S +AG GF+NL L P+ + ++++I+ +G YGR+ IG Sbjct: 61 PPRTIAEALATRLAADPRISSAEVAGPGFLNLRLRPAVWQGMVATILQAGDTYGRSTIGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+EFVSANPTGPMHVGH R AVVGD LA L+A++G+ VTREYYIND GAQ++ LA Sbjct: 121 GQKVNVEFVSANPTGPMHVGHVRGAVVGDALARLLAYAGWNVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY++A + + ++ EG YPG YL VG+ L KY LL+ E+ WL V++++ + Sbjct: 181 SAFERYREA-HGLEPEIREGLYPGDYLIPVGEALKAKYGDSLLDKGEQHWLTEVREFATE 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM++IR+DL AL ++ D++ SE + I +D L +YEG+L PPK KT Sbjct: 240 MMMQMIREDLAALGVEMDVYSSEKALY--GTGKIEAALDRLKEMDLIYEGVLEPPKGKTP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LFRST GDDVDRP+ KSDGS+TYFA D+AY K RGFD +I + G+D Sbjct: 298 EDWE-PREQTLFRSTAHGDDVDRPVKKSDGSWTYFAPDIAYHYDKVTRGFDQLIDIFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A AA+S + +++ L +LV+L+++G P KMSKRAG ++TLR VV++VG+ Sbjct: 357 HGGYVKRMKAAVAALSAGRVPLDIKLIQLVKLWKNGEPFKMSKRAGTYVTLRDVVEQVGT 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN LDFDF KV EQSKENPVFYVQYA AR S+ R+A++ +D Sbjct: 417 DVTRFVMLTRKNDATLDFDFDKVLEQSKENPVFYVQYANARINSVLRKAREQG--MDVSD 474 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + +E+ LI LAE+PR++E A EP+++AFYL++LAS HG W+ G Sbjct: 475 ATLATADLDRLDHPAEIALIAKLAEWPRLVEIAARTNEPHRVAFYLHELASELHGLWNRG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + LRF+Q ++ ++ ++ L AV +I +GL I+GV EM Sbjct: 535 NDEAGLRFLQ-DDPVVSQAKIALARAVGVVICAGLGILGVTPVEEM 579 >gi|159044277|ref|YP_001533071.1| arginyl-tRNA synthetase [Dinoroseobacter shibae DFL 12] gi|157912037|gb|ABV93470.1| arginyl-tRNA synthetase [Dinoroseobacter shibae DFL 12] Length = 581 Score = 638 bits (1645), Expect = e-180, Method: Composition-based stats. Identities = 264/586 (45%), Positives = 380/586 (64%), Gaps = 7/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF D + + L E+ + + + + + +E PRD AHG ++TNAAM+L++P + Sbjct: 1 MNLFTDIRAGVLAALTEMQAEGTLPEGLDFANVTVEPPRDAAHGDMATNAAMVLAKPAKM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + ++ DP V S +AG GF+NL L+P+ + ++ +++ +G +GR+ +G+ Sbjct: 61 KPRDIAEALAGKLAADPRVASAEVAGPGFLNLRLAPTLWQDVVRAVLTTGTGFGRSSMGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGP+HVGH R AV GD LASL+ F+GY+VTREYYIND GAQ++ LA Sbjct: 121 GRRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGYDVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + +G YPG YL VG+ L DK ++ E+ WL V+D++ Sbjct: 181 SVYLRYLEA-HGQQVAFEDGTYPGDYLIAVGEALKDKVGDAFVDKGEQFWLAEVRDFATD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL +L ++ D F SE + I I +L +G +Y G L PPK K Sbjct: 240 AMMDLIRADLASLGVKMDRFFSEKSLY--GTGRIEAAIADLDAKGLIYRGTLEPPKGKVP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LFRST GDDVDRP+ KSDGS+TYFA D+AY K RG+D +I V G+D Sbjct: 298 EDWE-PREQTLFRSTAHGDDVDRPIKKSDGSWTYFAPDIAYHYDKVNRGYDALIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ K +++ L +LVRL+++G P KMSKRAG F+TL VV++VG Sbjct: 357 HGGYVKRMKAAVSALSDGKTPLDIKLTQLVRLFKNGEPFKMSKRAGTFVTLSDVVEQVGP 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN LDFDF KV EQS+ENPVFYVQYA+AR S+ R+A + +D Sbjct: 417 DVTRFVMLTRKNDAPLDFDFDKVLEQSRENPVFYVQYAHARVCSVLRKAAEAGVPVDDAN 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + D +EL+L LAE+PR++E A EP++++F LYD+A+ H W+ G Sbjct: 477 LAQADLS--GMTDPAELKLARALAEWPRLVEIAARTNEPHRISFALYDIAADLHALWNKG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++P LRF+Q + T ++ LV A A +I++GL I+GV EM Sbjct: 535 NDDPSLRFLQEGDSAATQAKIALVRACAVVISTGLGILGVSPVEEM 580 >gi|163735841|ref|ZP_02143270.1| arginyl-tRNA synthetase [Roseobacter litoralis Och 149] gi|161390927|gb|EDQ15267.1| arginyl-tRNA synthetase [Roseobacter litoralis Och 149] Length = 580 Score = 637 bits (1644), Expect = e-180, Method: Composition-based stats. Identities = 268/586 (45%), Positives = 389/586 (66%), Gaps = 8/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFA+ + + L ++ + + + + +E PRD +HG ++TNAAM+L++P G Sbjct: 1 MNLFAEMRALVLACLDQMVTAGHLPADLNMANVTVEPPRDASHGDMATNAAMVLAKPAGK 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + A + DP + S +AG GF+NL ++P R +L S++ +G ++GR +G Sbjct: 61 KPREIAEALAACLVADPRITSAEVAGPGFLNLRIAPDAWRAVLLSVLGAGTDFGRATLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGP+HVGH R AV GD LASL+ ++G++VTREYYIND GAQ++ LA Sbjct: 121 GQKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDYAGFDVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + + P+G YPG YL VG++L D + PEE WL ++ ++ Sbjct: 181 SVYLRYLEA-HGQEVAFPDGTYPGDYLIPVGQQLKDLKGDSYVGQPEEAWLQDIRTFATD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DLK+L ++ D+F SE + I I++L +G +Y+G+L PPK K Sbjct: 240 AMMDLIRADLKSLGVEMDVFYSEKSLY--GTGRIEAAIEDLKSKGLIYDGVLEPPKGKKP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP++KSDGS+TYFA D+AY K RG+D +I V G+D Sbjct: 298 EDWE-PREQTLFKSTEHGDDVDRPVMKSDGSWTYFAPDIAYHYDKVSRGYDALIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ K +++ L +LV+L+++G P KMSKRAG F+TLR VVD+VG Sbjct: 357 HGGYVKRMKAAVSALSDGKVPLDIKLTQLVKLFKNGEPFKMSKRAGTFVTLRDVVDQVGP 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN +LDFDF KV EQS+ENPVFYVQYA+AR S+ R+A+ +D D Sbjct: 417 DVARFVMLTRKNDAMLDFDFDKVMEQSRENPVFYVQYAHARVASVMRKAEAAGIAVDMDT 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + +EL LI L+E+PR++E A + EP+++AFYLY+L+ VFH W+ G Sbjct: 477 LKAADLSL--LDHEAELGLIAKLSEWPRLVETAARSNEPHRVAFYLYELSGVFHALWNRG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P LRFVQ ++ K+T ++ L A + +I +GL I+GV EM Sbjct: 535 NDVPELRFVQ-DDPKVTQAKIALARACSVVIAAGLGILGVTPAQEM 579 >gi|154253462|ref|YP_001414286.1| arginyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1] gi|171769666|sp|A7HXJ6|SYR_PARL1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|154157412|gb|ABS64629.1| arginyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1] Length = 583 Score = 636 bits (1642), Expect = e-180, Method: Composition-based stats. Identities = 276/586 (47%), Positives = 379/586 (64%), Gaps = 5/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F F R++ L+ ++ + + + L R+ +E PRD +HG LSTNAAM+L++P G+ Sbjct: 1 MNIFRFFEGRVEAALRSLEEEGVLPSGLDLTRVAVEPPRDPSHGDLSTNAAMVLAKPAGM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +AE + ++ + V V +AG GFINL L+P++ + + I+ SG YG + +G Sbjct: 61 KPRELAEQLAVKLGGEEAVTEVDVAGPGFINLRLNPAFWQARIPEILRSGPAYGASDVGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G VN+E+VSANPTGPMHVGH R AV GD L +L+ GY V REYYINDAG QI LA Sbjct: 121 GEAVNVEYVSANPTGPMHVGHVRGAVFGDALCNLLEKVGYRVCREYYINDAGGQIEVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY++AL + +PEG YPG YLK VG+ L + LL E + L IV++ +V+ Sbjct: 181 SAFLRYREALGEDIGQIPEGLYPGGYLKPVGQALVAAHGRSLLEKDEPEALSIVREAAVE 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM++IR DL L I H+ F SE HR + + L +G +Y G L PPK + Sbjct: 241 AMMELIRGDLGVLGIVHETFFSELALHR--SGFVEQTLKVLEDKGLIYIGELEPPKGEVP 298 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + R Q LFRST GDD DR L KSDGS+TYFA D+AY KY RG+ +I V G+D Sbjct: 299 DDWEA-RPQTLFRSTEFGDDTDRALKKSDGSWTYFAPDIAYHLDKYNRGYRTLIDVWGAD 357 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 HSGY+KR+ A A V++ A+ +V +C+LVRL+R+G P+KMSKR+GDF+TLR VVDEVG Sbjct: 358 HSGYIKRMRAAIAGVTDGNAEFDVKICQLVRLFRNGEPVKMSKRSGDFVTLREVVDEVGK 417 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRFMML RKN LDFDF KV EQS++NPVFYVQYA AR S+ R + D Sbjct: 418 DVVRFMMLTRKNDAPLDFDFAKVMEQSRDNPVFYVQYANARIHSVLRNVAEEGT-YDLSD 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 D +E+ L+ +A +PR++E A +A EP+++AFYL DLA+ FHG W+ G Sbjct: 477 GALANADFTLLTDEAEMALVRLMAGFPRLVEQAALAHEPHRIAFYLDDLAAAFHGLWNKG 536 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++ LRF++A++R +T+ RL L+ + A +I +GL I+GVE EM Sbjct: 537 KDDHSLRFIRADHRDVTLARLALIRSAAYVIAAGLAILGVEPTEEM 582 >gi|182679625|ref|YP_001833771.1| arginyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC 9039] gi|254782941|sp|B2IJG9|SYR_BEII9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|182635508|gb|ACB96282.1| arginyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC 9039] Length = 590 Score = 636 bits (1640), Expect = e-180, Method: Composition-based stats. Identities = 288/590 (48%), Positives = 392/590 (66%), Gaps = 6/590 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLG- 58 M +F +F +R+ L+ I ++ + + L R V+E PR+ AHG L+ NAAM+ ++ Sbjct: 1 MNIFTEFHARIAAILRGIIGSGRLPEDLDLTRFVVEPPREAAHGDLAANAAMVYAKEAKP 60 Query: 59 --LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116 +P +A I + D DV +AG GFIN+ L P + ++L + + G ++GR Sbjct: 61 AFANPRQLAVEIAVALAEDGDVAEAEVAGPGFINIRLKPEFFGRLLGAALEQGSDFGRPA 120 Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176 K+N+E+VSANPTGPMHVGH R AV GD LA+L+AF+G+ VTREYYINDAGAQ++ Sbjct: 121 TAAQEKINVEYVSANPTGPMHVGHGRGAVFGDALANLLAFAGFGVTREYYINDAGAQVDV 180 Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236 LA S RY++AL +PEG YPG YLK VG LA + E+WL I + Sbjct: 181 LARSAHLRYREALGETIGAIPEGLYPGDYLKSVGASLAQAHGDTYRGSNGEEWLEIFRLA 240 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS-PIRDIIDNLARQGYVYEGILPPPK 295 ++ MM +IRDDL ALNI H++F SE R + + I L +G VYEG LPPPK Sbjct: 241 AIDGMMAMIRDDLAALNITHEVFFSERSLTRSEDGDQVAAAIAFLRDRGLVYEGRLPPPK 300 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 + + + DR+Q+LF+ST GDDVDRPL KSDG+YTYFA+D+AY K K +RG+ +I V Sbjct: 301 GQAIEDWE-DREQVLFKSTDFGDDVDRPLKKSDGTYTYFASDIAYHKTKIDRGYSVLIDV 359 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 G+DH GYVKR+ A A+SE + ++V LC+LV+L R G P+KMSKRAGDF+TLR VVD Sbjct: 360 WGADHGGYVKRMAAAVKALSEGRVTLDVKLCQLVKLMRGGEPVKMSKRAGDFVTLREVVD 419 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 EVG D+VRFMML+RKN +L+FD KV EQSK+NPVFYVQYA+AR +S+FRQA + PDL Sbjct: 420 EVGVDAVRFMMLFRKNDAVLEFDLAKVIEQSKDNPVFYVQYAHARVKSVFRQAATLLPDL 479 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 D L D E +LI +A++PRV+E A +A EP+++AFYL+DLAS H H Sbjct: 480 DCSLAALKTADFSLLGDEGEARLIKIIAQFPRVVEGAALAHEPHRIAFYLHDLASELHAH 539 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W+ G++ P LRF+ R LT+ RL LVH +A ++ SGL+++GV +P+EM Sbjct: 540 WTRGKDQPHLRFIYEERRDLTLARLALVHIMAEVLASGLSLLGVSAPSEM 589 >gi|170749174|ref|YP_001755434.1| arginyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831] gi|254782974|sp|B1M335|SYR_METRJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|170655696|gb|ACB24751.1| arginyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831] Length = 583 Score = 636 bits (1640), Expect = e-180, Method: Composition-based stats. Identities = 280/587 (47%), Positives = 398/587 (67%), Gaps = 7/587 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FA F +R+++ ++ + + + + L R+V+E PRD +HG L+TNAA++L++ Sbjct: 1 MNIFALFEARVRDAVEALTRAGHLPEGLDLGRVVVEPPRDASHGDLATNAALVLAKEARA 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P + E + A ++ DP + +AG GFINL L P+ ++ + + +GR + Sbjct: 61 NPKALGESLAAELRADPRIVEASVAGPGFINLRLDPAIFHAVVRDALEAPEAFGRARL-P 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +N+E+VSANPTGPMHVGH R AV GD L +L+ +G +VTREYYINDAG Q++ LA Sbjct: 120 GGPINVEYVSANPTGPMHVGHGRGAVFGDALCNLLVAAGRQVTREYYINDAGVQVDVLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY++AL + EG YPG YLK VG LA+ + LL+ PE +WLP V++ ++ Sbjct: 180 SAFQRYREAL-GEPFAIAEGLYPGDYLKPVGARLAETHGRALLDKPEAEWLPTVRETALG 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM +IR DL A+ I+HD+F SE + ++ ++ L +G VYEG LPPPK + Sbjct: 239 MMMDMIRADLAAIGIRHDVFFSERTLQ--ESGAVKALLAELRAKGLVYEGRLPPPKGQLP 296 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + DR+Q LFR+ GDD DRPLLKSDGSYTYFA+D+AY + KY G +I V+G+D Sbjct: 297 EDWE-DREQTLFRTKEFGDDSDRPLLKSDGSYTYFASDIAYHRAKYLAGATELIDVLGAD 355 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A AVS+ KA ++V LC+LVRL R G P+KMSKRAG+F+TLR V+DEVG Sbjct: 356 HGGYVKRMQAAVKAVSDGKATLDVKLCQLVRLLRAGEPVKMSKRAGEFVTLRDVIDEVGR 415 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D++RFMML+RKN LDFD KV EQSK+NPVFYVQYA+AR RS+ RQA++ FPD D + Sbjct: 416 DAIRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYAHARVRSVQRQAREAFPDADLSV 475 Query: 480 FPRN-VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 D E++++ +A+YPRV+E+A +A EP+++AF+LY+LAS H W+ Sbjct: 476 AALAREADLAVLSDPGEIEMMRLIAQYPRVLESAALAHEPHRIAFHLYELASALHSFWNK 535 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G++ P+LRFV A +RK T RL LV A+ S + +GL I+GV +P+EM Sbjct: 536 GKDLPQLRFVNATDRKSTWARLALVEALRSTLAAGLAILGVTAPDEM 582 >gi|260575254|ref|ZP_05843254.1| arginyl-tRNA synthetase [Rhodobacter sp. SW2] gi|259022514|gb|EEW25810.1| arginyl-tRNA synthetase [Rhodobacter sp. SW2] Length = 580 Score = 635 bits (1639), Expect = e-180, Method: Composition-based stats. Identities = 271/586 (46%), Positives = 378/586 (64%), Gaps = 8/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF+D S + + + ++ + + L + +E PRD HG ++TNAAM+L++P GL Sbjct: 1 MNLFSDIRSLVIASIDAMVAAGELPQGLDLAAVAVEPPRDAGHGDMATNAAMVLAKPAGL 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + AR+ DP + V +AG GF+NL L P+ + ++ +++ G +YGR +G Sbjct: 61 APRAIAESLAARLARDPRIAGVEVAGPGFLNLRLQPAVWQGLVGAVLRQGADYGRATLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+EFVSANPTGPMHVGH R AVVGD LA L+AF+G+ VTREYYIND G Q++ LA Sbjct: 121 GRRVNVEFVSANPTGPMHVGHVRGAVVGDALARLLAFAGWNVTREYYINDGGGQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++A ++ EG YPG YL VG+ L KY + LL PE WL ++ +S Sbjct: 181 SAYERYREAC-GLSPEIREGLYPGDYLIPVGEALKAKYGTSLLEQPESVWLADLRTFSTD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM +IR DL AL + D++ SE + I I+ L G +YEG L PPK K Sbjct: 240 MMMTMIRADLAALGVTMDVYSSEKALY--GTGRIEAAIETLRGMGLIYEGTLEPPKGKEP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R Q LFRST GDDVDRP++KSDGS+TYFA D+AY K +RGFD +I + G+D Sbjct: 298 EDWE-PRLQTLFRSTAHGDDVDRPVMKSDGSWTYFAPDIAYHYDKVQRGFDELIDIFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S + +++ L +LV+L+++G P KMSKRAG F+TLR V+D VG+ Sbjct: 357 HGGYVKRMKAAVSALSNGRVPLDIKLVQLVKLWKNGEPFKMSKRAGTFVTLRDVIDLVGA 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN LDFDF KV EQSK+NPVFYVQYA AR S+ R+A++ +D Sbjct: 417 DVTRFVMLTRKNDAALDFDFDKVLEQSKDNPVFYVQYANARINSVLRRAREAGVAVDDAT 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + +E+ L +AE+PRV+E A EP+++AFYLY+LAS HG W+ G Sbjct: 477 LAAADLG--KLDHEAEIGLAKKIAEWPRVVEIAARGNEPHRVAFYLYELASDLHGLWNRG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P+LRFVQ ++ +T ++ L A +I+SGL I+GV EM Sbjct: 535 NDAPQLRFVQ-DDSAITQAKIALARATGVVISSGLAILGVTPVEEM 579 >gi|254510090|ref|ZP_05122157.1| arginyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11] gi|221533801|gb|EEE36789.1| arginyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11] Length = 581 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 264/586 (45%), Positives = 388/586 (66%), Gaps = 7/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF++ + + L ++ + + + D + +E PRD AHG ++TNAAM+L++P + Sbjct: 1 MNLFSEIRGLVLDALAQMQSDGALPEGLSFDNVAVEPPRDAAHGDMATNAAMVLAKPAKM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ + ++ D + S +AG GF+NL L+PS + +L++++ G +YGR+ +G+ Sbjct: 61 KPRDIADALAGKLAADDRITSAEVAGPGFLNLRLAPSVWQGVLTAVLAQGTDYGRSTMGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGP+HVGH R AV GD LASL+A+SG++VTREYYIND GAQ++ LA Sbjct: 121 GQKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLAYSGHDVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++A ++ EG YPG YL +G+ L KY L++ PE +WL +++++ Sbjct: 181 SAYERYREA-NGLSPEIAEGLYPGDYLIPIGEALKAKYGDSLIDKPESEWLEDLRNFATD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DLKAL ++ D+F SE + I + +L +G +YEG+L PPK K Sbjct: 240 AMMDLIRADLKALGVEMDVFFSEKSLY--GTGRIEAALQSLTDKGLIYEGVLEPPKGKKP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP+ KSDG++TYFA D+AY K RGFD +I V G+D Sbjct: 298 EDWE-PREQTLFKSTEHGDDVDRPVKKSDGAWTYFAPDIAYHYDKVSRGFDALIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ K +++ L +LV+L+++G P KMSKRAG+F+TLR VVD+VG Sbjct: 357 HGGYVKRMKAAVSALSDGKVSLDIKLTQLVKLWKNGEPFKMSKRAGNFVTLRDVVDQVGP 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN LDFDF KV EQS+ENPVFYVQYA+AR S+ R+A + D Sbjct: 417 DVTRFVMLTRKNDAPLDFDFDKVLEQSRENPVFYVQYAHARVMSVLRRAAEAGIAADDAT 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + SEL + LAE+PR++E A EP+++AFYLY+LA FH W+ G Sbjct: 477 LAGADLG--TIDHASELTVAKKLAEWPRLVEIAARTNEPHRVAFYLYELAGDFHALWNKG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 E +LRF+Q + + ++ L +V+ +I++GL I+GV EM Sbjct: 535 NEETQLRFIQDGDVATSQSKIALARSVSVVISAGLGILGVTPAQEM 580 >gi|170740711|ref|YP_001769366.1| arginyl-tRNA synthetase [Methylobacterium sp. 4-46] gi|254782975|sp|B0UI81|SYR_METS4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|168194985|gb|ACA16932.1| arginyl-tRNA synthetase [Methylobacterium sp. 4-46] Length = 586 Score = 634 bits (1635), Expect = e-179, Method: Composition-based stats. Identities = 297/587 (50%), Positives = 397/587 (67%), Gaps = 4/587 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FA F R+ L + ++ + + L R+V+E PRD HG L+TNAA++L++ Sbjct: 1 MNIFAAFEERIGEALATLTRAGQLPEGLDLGRVVVEPPRDPGHGDLATNAALVLAKEART 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +AEL+ A ++ DP V +AG GF+NL L+P +++ + + SG +GR Sbjct: 61 NPKALAELLAAELRQDPRVTEASVAGPGFLNLRLAPEVFAEVVRAALASGEAFGRGARRP 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G N+E+VSANPTGPMHVGH R AV GD LA+L+A SG EV REYYINDAGAQ++ LA Sbjct: 121 GLV-NVEYVSANPTGPMHVGHGRGAVFGDALANLLAASGREVVREYYINDAGAQVDVLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++AL + +PEG YPG YLK VG+ LA+ + LL PE WLP+V+D+++ Sbjct: 180 SAYLRYREALGDAIGAIPEGLYPGDYLKPVGRRLAETHGRALLREPESAWLPVVRDFAIA 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD-IIDNLARQGYVYEGILPPPKSKT 298 AMM +IRDDL AL I+HD+F SE G +I L +G VY G LPPPK + Sbjct: 240 AMMDLIRDDLAALGIRHDVFFSERTLQGGGDGGAVGALIAELREKGLVYVGRLPPPKGQL 299 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + + DR Q LFRST GDD+DRPLLKSDG+YTYFA+D+AY K RG ++I V+G+ Sbjct: 300 PEDWE-DRDQTLFRSTAFGDDIDRPLLKSDGTYTYFASDIAYHASKVARGATDLIDVLGA 358 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GYVKR++A AVS+ +A ++V LC+LVRL R G P+KMSKRAG+F+TLR V+DEVG Sbjct: 359 DHGGYVKRMQAAVRAVSDGRASLDVKLCQLVRLLRGGEPVKMSKRAGEFVTLREVIDEVG 418 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D VRFMML+RKN LDFD KV EQSK+NPVFYVQYA+AR S+FRQA++ FP D Sbjct: 419 RDPVRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYAHARTASVFRQAREAFPGEDLS 478 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 D+ E ++ +A+YPRVIE A A EP++LAFYLY+LAS FH W+ Sbjct: 479 PQALAGADLSLLRDSGEADIMRLVAQYPRVIEAAGSAHEPHRLAFYLYELASAFHSFWNK 538 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G++ P+LRFV +RK T+ RL LV A+ ++ SGL I+GV +P+EM Sbjct: 539 GKDLPQLRFVNQTDRKSTLSRLALVAALRGVLASGLGILGVTAPDEM 585 >gi|84500943|ref|ZP_00999178.1| arginyl-tRNA synthetase [Oceanicola batsensis HTCC2597] gi|84391010|gb|EAQ03428.1| arginyl-tRNA synthetase [Oceanicola batsensis HTCC2597] Length = 581 Score = 634 bits (1635), Expect = e-179, Method: Composition-based stats. Identities = 271/585 (46%), Positives = 377/585 (64%), Gaps = 7/585 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFAD + + + L + + + + + +E PRD HG ++TNAAM+L++P GL Sbjct: 1 MNLFADIRATVLDSLAAMQQEGDLPGGLDFANVTVEPPRDPGHGDMATNAAMVLAKPAGL 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + R+ D + S +AG GF+NL L P+ I+ +++ SG +YGR+ +G+ Sbjct: 61 KPRDIAEALADRLAADDRITSAEVAGPGFLNLRLDPAVWADIVRTVLQSGPQYGRSAMGR 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGP+HVGH R AV GD LASL+ ++GYEVTREYYIND GAQ++ LA Sbjct: 121 GLKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDYAGYEVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + ++ G YPG YL VG+ L K ++ PEE WL V++ + + Sbjct: 181 SVYLRYLEA-HGHEVTFEGGTYPGDYLISVGEALKSKVGDAYVDQPEEVWLDDVREMATE 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM++IR DL L +Q D F SE + I ID+L+ +G +Y+G L PPK K Sbjct: 240 AMMELIRVDLGLLGVQMDHFFSEKALY--GTGRIEAAIDSLSDKGLIYQGTLEPPKGKVP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LFRST GDDVDRP+ KSDGS+TYFA D+AY K RG+D +I V G+D Sbjct: 298 EDWE-PREQTLFRSTEHGDDVDRPIRKSDGSWTYFAPDIAYHYDKISRGYDLLIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ + +++ LC+LV+L++DG P KMSKRAG FITLR VV+EVG Sbjct: 357 HGGYVKRMKAAVSALSDGRVPVDIKLCQLVKLFKDGEPFKMSKRAGTFITLRDVVEEVGP 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN LDFDF KV EQS+ENPVFYVQYA+AR S+ R+A + D Sbjct: 417 DVTRFVMLTRKNDAPLDFDFDKVLEQSRENPVFYVQYAHARIASVLRKAGEAGIAHDDAT 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + D +E + L E+PR++E A EP+++AFYLY+LA H W+ G Sbjct: 477 LAAADLS--GMTDEAEQSVAKKLTEWPRLVEIAARTNEPHRVAFYLYELAGDLHTLWNRG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 + P LRF+ + L+ +L L AVA +I++GL I+GV E Sbjct: 535 NDKPELRFLHEGDAALSQSKLALARAVAVVISAGLAILGVTPAEE 579 >gi|296447938|ref|ZP_06889847.1| arginyl-tRNA synthetase [Methylosinus trichosporium OB3b] gi|296254575|gb|EFH01693.1| arginyl-tRNA synthetase [Methylosinus trichosporium OB3b] Length = 592 Score = 631 bits (1629), Expect = e-179, Method: Composition-based stats. Identities = 292/593 (49%), Positives = 398/593 (67%), Gaps = 10/593 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F+DF + + L+ I ++ + + R V+E P+D AHG L+TN AM+ ++ Sbjct: 1 MNIFSDFHAIIAAILERIKASGRLPETLDASRFVVEPPKDAAHGDLATNVAMVFAKEAKP 60 Query: 60 ---DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116 +P +A I A + +P+V +AG GFIN+ L PS +L S++ G YGR Sbjct: 61 HFPNPRQLAVEIAAALVNEPNVAEAEVAGPGFINIRLKPSVYADVLRSVLAEGDAYGRPH 120 Query: 117 IGKG--TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 ++N+E+VSANPTGPMHVGH R AV GD LA+L+AF+G +VTREYYINDAGAQ+ Sbjct: 121 GRGALAGRINVEYVSANPTGPMHVGHGRGAVFGDALANLLAFAGADVTREYYINDAGAQV 180 Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234 + LA S F RY++AL ++PEG YPG YLK G+ +A + LL+ PE +WL VK Sbjct: 181 DVLARSAFLRYREAL-GETIEIPEGLYPGDYLKVAGEAIAKAHGRALLDKPEAEWLEPVK 239 Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR--GDPSPIRDIIDNLARQGYVYEGILP 292 ++ AMM++IRDDL AL+I+H++F SE H S I ID L +G VY+G LP Sbjct: 240 RAAIDAMMEMIRDDLAALDIRHEVFFSERTLHAKVNGVSQIDKEIDELRARGLVYDGRLP 299 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 PPK + + DR+Q LFRST GDD+DRPL KSDG+ TYFAAD+AY K K +RGF + Sbjct: 300 PPKGQLPDDWE-DREQTLFRSTDFGDDIDRPLKKSDGANTYFAADIAYHKSKIDRGFTTL 358 Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412 + V G+DH GYVKR+ A AA+S K +++V LC+LV+L R+G P+KMSKR+GDF+TLR Sbjct: 359 VDVWGADHGGYVKRMAAAVAALSAGKVELDVKLCQLVKLMRNGEPVKMSKRSGDFVTLRE 418 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 VVDEVG D+VRFMML+RKN L+FD KV EQSK+NPVFYVQYA+AR +S RQA F Sbjct: 419 VVDEVGVDAVRFMMLYRKNDAPLEFDLAKVIEQSKDNPVFYVQYAHARAKSAVRQALAAF 478 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 PDLD +P E D E+ L +A +PR++E A A EP+++AFYL+DLASVF Sbjct: 479 PDLDVSPAALASVPLELLTDEGEIALAKAIAHFPRLVEQAAAAHEPHRVAFYLHDLASVF 538 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H HW+ G++ P+LRFV A++R T R+ LV ++ ++ SG ++GV +P+EM Sbjct: 539 HAHWNKGKDRPQLRFVNADDRNSTCARIALVASLTCVLASGSRLLGVSAPDEM 591 >gi|146276951|ref|YP_001167110.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025] gi|166232831|sp|A4WQZ1|SYR_RHOS5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|145555192|gb|ABP69805.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025] Length = 580 Score = 631 bits (1629), Expect = e-179, Method: Composition-based stats. Identities = 268/586 (45%), Positives = 385/586 (65%), Gaps = 8/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF + S + L + ++ + L + +E PRD AHG ++TNAAM+L++P G Sbjct: 1 MNLFTEIRSLVTAELGAMAEAGELPAGLDLSAVAVEPPRDPAHGDMATNAAMVLAKPAGK 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + R+ DP + S +AG GF+NL L P+ + +++ ++ +G YGR+ IG Sbjct: 61 PPRAIAEALATRLAADPRILSAEVAGPGFLNLRLRPAVWQGLVARVLQAGDAYGRSTIGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+EFVSANPTGPMHVGH R AVVGD LA L+ F+G++VTREYYIND GAQ++ LA Sbjct: 121 GQRVNVEFVSANPTGPMHVGHVRGAVVGDALARLLVFAGWDVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++A + + ++ EG YPG YL VG+ L KY LL+ E WL V++++ + Sbjct: 181 SAYERYREA-HGLEPEIREGLYPGDYLIPVGEALKAKYGDSLLDKGEHCWLTDVREFATE 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM++IR+DL AL ++ D++ SE + I + L G +YEG+L PPK KT Sbjct: 240 MMMQMIREDLAALGVEMDVYSSEKALY--GTGKIEAALQRLQDMGLIYEGVLEPPKGKTP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LFRST GDDVDRP+ KSDGS+TYFA D+AY K RGFD +I + G+D Sbjct: 298 EDWE-PREQTLFRSTAHGDDVDRPVKKSDGSWTYFAPDIAYHYDKVTRGFDQLIDIFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A AA+S+ + +++ L +LV+L+++G P KMSKRAG ++TLR VV++VG+ Sbjct: 357 HGGYVKRMKAAVAALSDGRVPLDIKLIQLVKLWKNGEPFKMSKRAGTYVTLRDVVEQVGA 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN LDFDF KV EQSKENPVFYVQYA AR S+ R+A++ +D Sbjct: 417 DVTRFVMLTRKNDAALDFDFDKVLEQSKENPVFYVQYANARINSVLRKAREQG--MDVAD 474 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + +E+ LI LAE+PR++E A EP+++AFYL++L+S HG W+ G Sbjct: 475 AALACADLDRLDHPAEIALIAKLAEWPRLVEIAARTNEPHRIAFYLHELSSDLHGLWNRG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P LRF+Q ++ ++ ++ L AV +I +GL I+GV EM Sbjct: 535 NDEPGLRFLQ-DDPVVSQAKIALARAVGVVICAGLGILGVTPVEEM 579 >gi|188582826|ref|YP_001926271.1| arginyl-tRNA synthetase [Methylobacterium populi BJ001] gi|179346324|gb|ACB81736.1| arginyl-tRNA synthetase [Methylobacterium populi BJ001] Length = 594 Score = 631 bits (1628), Expect = e-179, Method: Composition-based stats. Identities = 285/596 (47%), Positives = 400/596 (67%), Gaps = 14/596 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +FA F +R++ L+ + ++ + + L R+V+E PRD AHG L+TNAA++L++ Sbjct: 1 MNIFALFETRVREALESLTRSGRLPEGLDLSRVVVEPPRDPAHGDLATNAALVLAKDAKQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P + E + ++ DP + +AG GFINL L+P +++ + + G +GR Sbjct: 61 NPKALGEALAEALRSDPRIVEASVAGPGFINLRLAPEVFHEVIRAALHDGEAFGRGN-MP 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G VNIE+VSANPTGPMHVGH R AV GD LA+L+A +G VTREYYINDAGAQ++ LA Sbjct: 120 GGPVNIEYVSANPTGPMHVGHGRGAVFGDALANLLAAAGRPVTREYYINDAGAQVDVLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++AL +PEG YPG YLK VG+ L + LL PE +WLP V+ +++ Sbjct: 180 SAYLRYREAL-GETITIPEGLYPGDYLKPVGEGLKQAHGDALLGKPEHEWLPTVRRFAID 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDP---------SPIRDIIDNLARQGYVYEGI 290 AMM +IR+DL A+ I+HD+F SE G + + +++D L +G VYEG Sbjct: 239 AMMDMIREDLAAIGIRHDVFFSEATLQGGSGGQGGGQGGSNRVAELLDALRAKGLVYEGR 298 Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350 LPPPK + + + DR+Q LFRST GDDVDRPLLKSDGSYTYFA+D+AY + K+ RG Sbjct: 299 LPPPKGQLPEDWE-DREQTLFRSTQFGDDVDRPLLKSDGSYTYFASDIAYHRDKWLRGAS 357 Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 +I V+G+DH GYVKR++A AVS+ +A+++V LC+LVRL R G P+KMSKRAG+F+TL Sbjct: 358 ELIDVLGADHGGYVKRMQAAVKAVSDGEARLDVKLCQLVRLLRAGEPVKMSKRAGEFVTL 417 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R V+DEVG D++RFMML+RKN LDFD KV EQSK+NPVFYVQY +AR S+ RQA++ Sbjct: 418 RDVIDEVGRDAIRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYGHARRFSVLRQARE 477 Query: 471 IFPDLDFDLFPRNVIPQES-EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 P DF + S D E++++ +A+YPRV+E+A A EP+++AFYLY+ A Sbjct: 478 ALPSEDFSREGLLADAELSVLTDPGEIEMMRLIAQYPRVLESAAAAHEPHRIAFYLYETA 537 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 S H W+ G++ P+LR V +R T RL LV A+ ++ SGL ++GV +P+EM Sbjct: 538 SSLHSFWNKGKDLPQLRIVNPTDRNSTRARLALVEALGGVLASGLAVLGVSAPDEM 593 >gi|84516347|ref|ZP_01003707.1| arginyl-tRNA synthetase [Loktanella vestfoldensis SKA53] gi|84510043|gb|EAQ06500.1| arginyl-tRNA synthetase [Loktanella vestfoldensis SKA53] Length = 598 Score = 631 bits (1628), Expect = e-179, Method: Composition-based stats. Identities = 275/586 (46%), Positives = 384/586 (65%), Gaps = 8/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFAD R+ L ++ + + + LD + +E PRD AHG ++TNAAM+L++P GL Sbjct: 19 MNLFADVRGRVLACLDQMVADGALPQGLALDAVAVEPPRDAAHGDMATNAAMVLAKPAGL 78 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P IA+ + ++ DP + S +AG GF+N++L P+ + I+ S + +GR+ +G+ Sbjct: 79 NPRAIADALAVKLAADPLIASADVAGPGFLNMHLVPAAWQGIVKSALSDK-GFGRSRLGQ 137 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G ++ +E+VSANPTGP+HVGH R AV GD LASL+ ++GY+VTREYYIND GAQ++ LA Sbjct: 138 GQRMLVEYVSANPTGPLHVGHTRGAVFGDALASLLDYAGYDVTREYYINDGGAQVDVLAR 197 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A ++ D PEG YPG YL VG+ L +K SE L+ E+ WL V+ ++ Sbjct: 198 SVYLRYVEA-HDLTVDWPEGSYPGDYLIPVGEALKEKVGSEYLDQSEDVWLDDVRLFATD 256 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL L I+ D F SE + I I L +G +Y+G+L PK KT Sbjct: 257 AMMALIRADLAQLGIEMDSFYSEKSLY--GSGLIEKAIAELDAKGLIYQGVLEAPKGKTP 314 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP+ KSDG++TYFA D+AY K +RGFD +I V G+D Sbjct: 315 EDWE-PREQTLFKSTAHGDDVDRPVQKSDGAWTYFAPDIAYHYDKVQRGFDALIDVFGAD 373 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A AA+S+ K +++ L +LV+LY++G P KMSKRAG FITLR VVDEVG Sbjct: 374 HGGYVKRMKAAVAALSDGKVPLDIKLTQLVKLYQNGAPFKMSKRAGTFITLRDVVDEVGP 433 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF ML RKN LDFDF KV EQSK+NPVFYVQYA+AR S+ R+A+D +D Sbjct: 434 DVTRFHMLTRKNDAPLDFDFAKVLEQSKDNPVFYVQYAHARVNSVLRKAQDAGVAVD--D 491 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + +EL + +AE+PR++E A EP+++AFYLYDLAS FH W+ G Sbjct: 492 ATLAAVDLSGLTHEAELAVARKIAEWPRLVEIAAKGHEPHRIAFYLYDLASDFHALWNRG 551 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ LRF+Q + T ++ L+ AVA +I+ GL I+GV EM Sbjct: 552 NDDASLRFLQMGDSDTTQAKIALIRAVAIVISHGLGILGVTPAEEM 597 >gi|288960182|ref|YP_003450522.1| arginyl-tRNA synthetase [Azospirillum sp. B510] gi|288912490|dbj|BAI73978.1| arginyl-tRNA synthetase [Azospirillum sp. B510] Length = 586 Score = 631 bits (1627), Expect = e-178, Method: Composition-based stats. Identities = 273/586 (46%), Positives = 381/586 (65%), Gaps = 5/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F F + ++ L+E+ + + + R+ +E PR+ +HG LSTNAAMIL++P + Sbjct: 1 MNIFKAFETDIRKLLEELAAEGAIPAGLDGSRLTVEPPREASHGDLSTNAAMILAKPAKM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +AEL+VA++K DV SV IAG GF+NL L P R + ++ +G +G + +G Sbjct: 61 APRALAELLVAKLKGRADVASVEIAGPGFVNLRLMPDVWRDRIRDVLTAGTAFGDSELGG 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 T VN+E+VSANPTGP+H H R AV GD LASL+ +GY VTREYYINDAGAQ++ LA Sbjct: 121 KTPVNVEYVSANPTGPLHAAHGRGAVFGDALASLLRKAGYAVTREYYINDAGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY++AL ++P G YPG YLK VG+ LA++ + + E +WLP +++++ Sbjct: 181 STFIRYREALGEAVGEIPAGLYPGEYLKEVGQALAERDGNRWVGTDEAEWLPACREFAIA 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 +M I++DL L I D++ SE + + L +G +Y G+L PPK K Sbjct: 241 MIMGWIKEDLGVLGITMDVYSSERALVA--AGAVNTALAALEERGLIYTGVLEPPKGKKP 298 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + R Q LF+S+ GDDVDRPL KSDGS+TYFA D+AY KY RG ++I V+G+D Sbjct: 299 DDWE-PRPQTLFKSSEFGDDVDRPLKKSDGSFTYFANDIAYHYDKYRRGAASLIDVLGAD 357 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A A+S A+++V LC+LV L +DG P+KMSKRAG F+TLR V+D+VG Sbjct: 358 HGGYVKRMQAATRAISGGAAELDVKLCQLVHLMQDGQPVKMSKRAGTFVTLRDVIDQVGK 417 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRF+ML R+N + LDFDF KV EQSK+NPVFYVQYA+ARCRS+ R A P LD Sbjct: 418 DVVRFIMLTRRNDQTLDFDFAKVTEQSKDNPVFYVQYAHARCRSVLRHAATALPQLDQTP 477 Query: 480 FPRNVIPQESEFD-TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + D E+ L +A +PR++E A A EP+++AF+LYDLAS FH W+ Sbjct: 478 ASLAASANLARLDAEEEMALAKRMATWPRIVEAAAEAHEPHRIAFFLYDLASDFHALWNR 537 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 GR++ LRF+ + +LT RL L+ AVA++I SGL ++GVE E Sbjct: 538 GRDDASLRFLIEGDAELTTARLALIAAVATVIASGLAVMGVEPVEE 583 >gi|83952167|ref|ZP_00960899.1| arginyl-tRNA synthetase [Roseovarius nubinhibens ISM] gi|83837173|gb|EAP76470.1| arginyl-tRNA synthetase [Roseovarius nubinhibens ISM] Length = 581 Score = 630 bits (1626), Expect = e-178, Method: Composition-based stats. Identities = 266/586 (45%), Positives = 377/586 (64%), Gaps = 7/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF + + L+ + + + L + +E PRD HG ++TNAAM+L++P GL Sbjct: 1 MNLFTEIRGTVIAALEAMMDADTLPAGLDLSNVAVEPPRDPLHGDMATNAAMVLAKPAGL 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + AR+ DP + S +AG GF+NL L+P ++L +++ +G ++GR+ +G+ Sbjct: 61 KPRDIAEDLAARLADDPRIASAEVAGPGFLNLRLAPGQWHEVLRAVLAAGPDFGRSTMGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGP+HVGH R AV GD LASL+ F+G+EVTREYYIND GAQ++ LA Sbjct: 121 GRKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFTGHEVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + + +G YPG YL VG+ L + + PEE WL V++++ + Sbjct: 181 SVYLRYLEA-HGQEVAFEDGTYPGDYLIPVGEALKSEVGDAYVGQPEEVWLEKVREFATE 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM +IR+DLK+L ++ D F SE + I + L +G +YEG+L PPK K Sbjct: 240 KMMGLIREDLKSLGVEMDEFYSEKSLY--GTGRIEAALAELESKGLIYEGVLEPPKGKKP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP+ KSDG++TYFA D+AY K RGFD +I V G+D Sbjct: 298 EDWE-PREQTLFKSTEHGDDVDRPVKKSDGAWTYFAPDIAYHYDKVSRGFDALIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ + +++ LC+LV+LY++G P KMSKRAG F+TLR VVD VG+ Sbjct: 357 HGGYVKRMKAAVSALSDGRVPLDIKLCQLVKLYKNGEPFKMSKRAGTFVTLRDVVDMVGA 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF ML RKN LDFDF KV EQSK+NPVFYVQYA AR S+ R+A + D Sbjct: 417 DVTRFHMLTRKNDAPLDFDFDKVVEQSKDNPVFYVQYANARVSSVLRKAAEAGIAADDAT 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + +EL L +AE+PR++E A EP+++AFYLYDLAS H W+ G Sbjct: 477 LAKADLS--ILSHEAELTLARKIAEWPRLVEIAGRTNEPHRVAFYLYDLASDLHALWNRG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P LRF+Q + + ++ L A +I++GL I+GV EM Sbjct: 535 HDEPGLRFLQEGDAATSQAKIALARAATVVISAGLGILGVTPVEEM 580 >gi|85703270|ref|ZP_01034374.1| arginyl-tRNA synthetase [Roseovarius sp. 217] gi|85672198|gb|EAQ27055.1| arginyl-tRNA synthetase [Roseovarius sp. 217] Length = 581 Score = 630 bits (1626), Expect = e-178, Method: Composition-based stats. Identities = 266/586 (45%), Positives = 379/586 (64%), Gaps = 7/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF D + + L + ++ + + L + +E PRD AHG ++TNAAM+L++P GL Sbjct: 1 MNLFTDMRALVVETLAAMQTGGQLPEGLDLANVTVEPPRDAAHGDMATNAAMVLAKPAGL 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + AR+ DP ++ V +AG GF+NL LSP + + + + G+ +GR+ +G+ Sbjct: 61 KPREIAEALAARLGDDPRIEHVEVAGPGFLNLQLSPLLWQNVARAALQQGVTFGRSTMGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+EFVSANPTGP+HVGH R AV GD LASL+ F GYEVTREYYIND GAQ++ LA Sbjct: 121 GRRVNVEFVSANPTGPLHVGHTRGAVFGDALASLLDFVGYEVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + +G YPG YL VG+ L + + PE+ WL ++D++ Sbjct: 181 SVYLRYLEA-HGQAVAFADGTYPGDYLIEVGEALKAEVGDVYVGQPEDVWLEPIRDFATD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM +IR+DL AL ++ D+F SE + I I++L +G +Y G+L PPK K Sbjct: 240 RMMALIREDLAALGVEMDVFYSEKSLY--GTGLIEAAIEDLRSKGLIYRGVLEPPKGKMP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP++KSDG +TYFA D+AY K RGFD +I V G+D Sbjct: 298 EDWE-PREQTLFKSTEHGDDVDRPIMKSDGGWTYFAPDIAYHYDKISRGFDLLIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S + +++ LC+LV+L+++G P KMSKRAG F+TLR VVD+VG+ Sbjct: 357 HGGYVKRMKAAVSALSNGRVPVDIKLCQLVKLFKNGEPFKMSKRAGTFVTLRDVVDQVGA 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN LDFDF KV EQSK+NPVFYVQYA AR S+ R+A + +D Sbjct: 417 DVTRFVMLTRKNDAPLDFDFDKVLEQSKDNPVFYVQYANARVNSVLRKAAEAGMAVDDAT 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + +EL + +AE+PR++E A EP+++AFYLYDLAS H W+ G Sbjct: 477 LAQADLS--GLTHEAELNVARKIAEWPRLVEIAGRTNEPHRVAFYLYDLASDLHALWNRG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ LRF+Q + + ++ L AV +I++GL I+GV EM Sbjct: 535 NDDASLRFIQEGDVATSQAKIALARAVTVVISAGLGILGVTPAEEM 580 >gi|163739603|ref|ZP_02147012.1| arginyl-tRNA synthetase [Phaeobacter gallaeciensis BS107] gi|161387062|gb|EDQ11422.1| arginyl-tRNA synthetase [Phaeobacter gallaeciensis BS107] Length = 581 Score = 629 bits (1623), Expect = e-178, Method: Composition-based stats. Identities = 263/586 (44%), Positives = 371/586 (63%), Gaps = 7/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF D S + + L + + + + + + +E PRD AHG ++TNAAM+L++P + Sbjct: 1 MNLFTDIRSLVLDCLTAMVDEGTLPEGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAKM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ + ++ D V S +AG GF+NL L S + +L +++ I++GR+ +G Sbjct: 61 KPRDIADALAGKLAADARVTSAEVAGPGFLNLRLDRSSWQSVLGAVLAEDIKFGRSDLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGP+HVGH R AV GD LASL+ F GY+VTREYYIND G Q++ LA Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFVGYDVTREYYINDGGGQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + + +G YPG YL VG+ L DK +N PE+ WL +++++ Sbjct: 181 SVYLRYLEA-HGQEVAFVDGTYPGDYLVPVGQALKDKVGDAYVNQPEDVWLEEIRNFATD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL +L IQ D F SE + I + +L +G +YEG+L PPK K Sbjct: 240 AMMDLIRADLASLGIQMDKFFSEKSLY--GTGLIESALKSLDDKGLIYEGVLEPPKGKKP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + R+Q LF+ST GDDVDRP+ KSDG++TYFA D+AY K ERGFD +I + G+D Sbjct: 298 DDWE-PREQTLFKSTEHGDDVDRPVKKSDGAWTYFAPDIAYHYDKVERGFDMLIDIFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ + +++ LC+LV+L++DG KMSKRAG F+TLR VVD VG Sbjct: 357 HGGYVKRMKAAVSALSDGRVPLDIKLCQLVKLFKDGQEFKMSKRAGTFVTLRDVVDAVGP 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RFM+L RKN + DFD K EQSK+NPVFYVQYA AR S R+A + D Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPVFYVQYANARICSTLRKAAEAGITTDDAT 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + D ++L + LAE+PR++E A EP+++AFYLYDLAS HG + G Sbjct: 477 LAAADLTL--LQDDAQLTVAKKLAEWPRLVEIAARTNEPHRVAFYLYDLASELHGLYHLG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + N LRFV +N T ++ L AV+ +I++GL I+GV EM Sbjct: 535 KTNEGLRFVNESNPSATHAKMALAKAVSIVISAGLGILGVTPAQEM 580 >gi|163793124|ref|ZP_02187100.1| Arginyl-tRNA synthetase [alpha proteobacterium BAL199] gi|159181770|gb|EDP66282.1| Arginyl-tRNA synthetase [alpha proteobacterium BAL199] Length = 585 Score = 628 bits (1621), Expect = e-178, Method: Composition-based stats. Identities = 262/585 (44%), Positives = 380/585 (64%), Gaps = 4/585 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F F +++ L+++ + + DR+ +E PRD +HG +STNAAM+L++P+G Sbjct: 1 MNVFNQFREKIQAALEDLARRQGWPDGLPFDRVTVEPPRDLSHGDISTNAAMLLAKPVGT 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P IA + + P+V+S +AG GFINL L+ S +++I+ G YG + G+ Sbjct: 61 NPRAIAAPLAEALARLPEVESAEVAGPGFINLRLAASVWLAEVAAILSEGTAYGSSTTGE 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGP+H H R AV GD LA+L+ +G+ VTREYYINDAGAQ+ TLA Sbjct: 121 GRRVNVEYVSANPTGPLHAAHARGAVFGDALAALLKKAGFTVTREYYINDAGAQVETLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S RY++AL + +PEG+YPG YLK VG+ +A+ + PE +WL + + +V+ Sbjct: 181 STHLRYREALGEDIGAIPEGHYPGEYLKDVGQAIAESDGDRWVGKPESEWLEVFRARAVE 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM ++ DL A+ IQ D F SE + ++ D L +G VY G+L PPK KT Sbjct: 241 LMMTEVKRDLLAMGIQFDTFSSERALV--EAGAVQRAFDTLDGRGLVYTGVLEPPKGKTP 298 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + R QLLF+++ GDDVDRPL KSDGS+TYFA D+AY K+ RG +I V+G+D Sbjct: 299 DDWE-PRPQLLFKASEFGDDVDRPLKKSDGSWTYFANDIAYHLDKFLRGSPELIDVLGAD 357 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A A+S + ++V LC+LV L+ G P++MSKRAG F+TLR V+D VGS Sbjct: 358 HGGYVKRMKAAVTAISGGEGSLDVKLCQLVHLFDGGKPVRMSKRAGTFVTLRDVIDSVGS 417 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 DSVRF+ML R+N + L+FD+ KV+EQS++NPVFYVQYA+AR S+ R A + P D Sbjct: 418 DSVRFIMLTRRNDQTLEFDYQKVQEQSRDNPVFYVQYAHARATSVIRHAGEALPGHDLSD 477 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + S D EL LI LA +PR++E+A A EP+++AFYL ++A+ FH W+ G Sbjct: 478 AALAKVSLGSLTDPDELGLIRLLAGWPRLVESAADAHEPHRVAFYLGEVAAAFHSLWNKG 537 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 ++ LRF+ ++ T+ R+ LV A A++I SGL ++GV+ E Sbjct: 538 KDEAHLRFILPDDTATTLARMALVRATATVIASGLGVMGVQPVEE 582 >gi|217976682|ref|YP_002360829.1| arginyl-tRNA synthetase [Methylocella silvestris BL2] gi|217502058|gb|ACK49467.1| arginyl-tRNA synthetase [Methylocella silvestris BL2] Length = 598 Score = 628 bits (1619), Expect = e-177, Method: Composition-based stats. Identities = 291/590 (49%), Positives = 387/590 (65%), Gaps = 6/590 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M ++ADF R+ L+ I ++ ++ L+R V+E PRD +HG L+ NAAM+ ++ Sbjct: 9 MNIYADFHQRIAAILETIVASGRLPAELDLNRFVVEPPRDASHGDLAANAAMVYAKEAKA 68 Query: 60 ---DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116 +P +A I + DPDV S +AG GFIN+ L P +IL + G ++G+ Sbjct: 69 SFSNPRQLASEIAFALAEDPDVASAEVAGPGFINISLKPDVFGRILRRALELGADFGKGA 128 Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176 G KVN+E+VSANPTGPMHVGH R AV GD LA+L+ F+G +VTREYYINDAGAQ++ Sbjct: 129 AKAGGKVNVEYVSANPTGPMHVGHGRGAVFGDALANLLEFAGADVTREYYINDAGAQVDV 188 Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236 LA S RY++AL D+PEG YPG YLK VG LA ++ L+ PE +W+ + Sbjct: 189 LARSAHLRYREALGEEIGDIPEGLYPGDYLKSVGATLAARFGDSLVQRPETEWMEPARAA 248 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS-PIRDIIDNLARQGYVYEGILPPPK 295 +++ MM +IRDDL AL+I H IF SE RG+ + I L G VYEG LPPPK Sbjct: 249 AIEGMMAMIRDDLAALDITHAIFFSERSLTRGEAGDQVAAAIAALRADGLVYEGRLPPPK 308 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 + + + DR+Q LFRST GDDVDRPLLKSDG YTYFA+D+AY K K +RGF +I V Sbjct: 309 GQAAEDWE-DREQTLFRSTAFGDDVDRPLLKSDGGYTYFASDIAYHKTKIDRGFALLIDV 367 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 G+DH GYV R+ A A+S KA ++V LC+LV+L R G P+KMSKR+GDF+TLR VVD Sbjct: 368 WGADHGGYVSRMRAAVEALSRGKASLDVKLCQLVKLMRAGEPVKMSKRSGDFVTLREVVD 427 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 EVG D+VRFMML+RKN L+FD KV EQSK+NPVFYVQYA+AR RS+ RQA P Sbjct: 428 EVGRDAVRFMMLFRKNDAPLEFDLSKVIEQSKDNPVFYVQYAHARARSVLRQAHVSIPAN 487 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 D EL L+ +A++PRVIE A A EP++LAFYL++LAS HGH Sbjct: 488 KLTTSAFEEAELGLLVDPGELYLVKLVAQFPRVIEAAASAHEPHRLAFYLHELASALHGH 547 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 W+ G++ P+LRF+ LT+ RL LV +A ++++GL ++GV +P+EM Sbjct: 548 WTRGKDQPQLRFLNEEMPNLTIARLALVKVLAGVLSAGLGVLGVSAPDEM 597 >gi|126739455|ref|ZP_01755148.1| arginyl-tRNA synthetase [Roseobacter sp. SK209-2-6] gi|126719555|gb|EBA16264.1| arginyl-tRNA synthetase [Roseobacter sp. SK209-2-6] Length = 581 Score = 627 bits (1617), Expect = e-177, Method: Composition-based stats. Identities = 261/586 (44%), Positives = 371/586 (63%), Gaps = 7/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF D S + + L + + + + + + +E PRD AHG ++TNAAM+L++P + Sbjct: 1 MNLFTDIRSLVIDSLTAMSAEGALPEGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAKM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + ++ D V S +AG GF+NL L+P + ++ +++ +G ++GR+ G Sbjct: 61 KPRDIAEALAGKLAADARVTSAEVAGPGFLNLRLAPVVWQGVVDAVLKAGTDFGRSDQGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGP+HVGH R AV GD LASL+A++GY+VTREYYIND G Q++ LA Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLAYAGYDVTREYYINDGGGQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + + +G YPG YL VG+ L DK L+ PE+ WL V+++S Sbjct: 181 SVYLRYLEA-HGQEIAFADGTYPGDYLVPVGEALKDKVGDAYLDQPEDVWLADVREFSTD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL L I+ D+F SE + I + L +G +Y+G+L PPK K Sbjct: 240 AMMDLIRADLARLGIEMDVFYSEKSLY--GTGRIEAALKELEEKGLIYQGVLEPPKGKKP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + R+Q LF+ST GDDVDR + KSDG++TYFA D+AY K RGFD +I + G+D Sbjct: 298 DDWE-PREQTLFKSTDHGDDVDRAVKKSDGAWTYFAPDIAYHYDKVSRGFDELIDIFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ K +++ LC+LV+L++DG KMSKRAG F+ LR VVD VG Sbjct: 357 HGGYVKRMKAAVSALSDGKVPLDIKLCQLVKLFKDGQEFKMSKRAGTFVMLRDVVDAVGP 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RFM+L RKN + DFD K EQSK+NPVFYVQYA AR S R+A D D Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPVFYVQYANARICSTLRRAAAEGIAGDDDT 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + S D ++L ++ L E+PR +E A EP+++AFYLYDLAS HG + G Sbjct: 477 LKSADLTLIS--DPAQLSVVKKLGEWPRQVEIAARTNEPHRIAFYLYDLASELHGLYHLG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + N LRFV +++ T L L +V+ +I++GL I+GV+ EM Sbjct: 535 KSNEGLRFVNESSQSATHANLALARSVSIVISAGLGILGVKPAQEM 580 >gi|84687542|ref|ZP_01015418.1| arginyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654] gi|84664451|gb|EAQ10939.1| arginyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654] Length = 572 Score = 626 bits (1615), Expect = e-177, Method: Composition-based stats. Identities = 268/586 (45%), Positives = 381/586 (65%), Gaps = 16/586 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFAD S + L + + + + + +E PRD AHG ++TNAAM+L++P G Sbjct: 1 MNLFADIRSLVIASLDALVAEGALPAGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAGA 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ + A++ D + S +AG GF+NL L P L V++ +YG + +G+ Sbjct: 61 KPRDIADALSAKLAADDRIASAEVAGPGFLNLRLEPGVWAA-LVEGVLADPDYGTSDMGQ 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGP+HVGH R AV GD LASL+A++G++VTREYYIND GAQ++ LA Sbjct: 120 GQKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLAYAGHDVTREYYINDGGAQVDVLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + + +G YPG YL VG+ L K + E+ WL V+D++ Sbjct: 180 SVYLRYLEA-HGQEVAFEDGTYPGDYLIEVGEALKAKVGDAFVGKGEQFWLEDVRDFATD 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AM+ +IR DLKAL ++ D+F SE + I I++L +G +Y+G L PPK K + Sbjct: 239 AMLDLIRADLKALGVEMDVFFSEKSLY--GTGRIEAAIEDLRGKGLIYKGTLEPPKGKLS 296 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP++KSDG++TYFA D+AY K RGFD +I V G+D Sbjct: 297 EDWE-PREQTLFKSTDYGDDVDRPIMKSDGAWTYFAPDIAYHYDKVTRGFDQLIDVFGAD 355 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A AA+S+ K +++ L +LV+LY++G P KMSKRAG F+TLR VVDEVG Sbjct: 356 HGGYVKRMKAAVAALSDNKVPLDIKLTQLVKLYKNGEPFKMSKRAGTFVTLRDVVDEVGP 415 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN LDFDF K EQSK+NPVFYVQYA AR S+ R+A D+ + Sbjct: 416 DVTRFIMLTRKNDAPLDFDFDKALEQSKDNPVFYVQYANARVHSVLRKAADMGVEPG--- 472 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + S D +E+++ LAE+PR++E A EP+++AFYLY+LAS FH W+ G Sbjct: 473 -------KPSLTDEAEIKVAQKLAEWPRLVEIAARTHEPHRIAFYLYELASEFHALWNKG 525 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++P LRF+ ++ + T ++ L AV+ +I++GL I+GV EM Sbjct: 526 NDHPELRFLAESDSQATAAKIALPKAVSVVISAGLGILGVTPLEEM 571 >gi|254477547|ref|ZP_05090933.1| arginyl-tRNA synthetase [Ruegeria sp. R11] gi|214031790|gb|EEB72625.1| arginyl-tRNA synthetase [Ruegeria sp. R11] Length = 581 Score = 626 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 261/586 (44%), Positives = 371/586 (63%), Gaps = 7/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF D S + + L + + + + + + +E PRD AHG ++TNAAM+L++P + Sbjct: 1 MNLFTDIRSLVLDCLNAMVAEGTLPEGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAKM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + ++ D V S +AG GF+NL L + +LS+++ G +GR+ +G+ Sbjct: 61 KPRDIAEALATKLAADARVTSAEVAGPGFLNLRLDQGSWQAVLSNVLAEGTNFGRSNMGE 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGP+HVGH R AV GD LASL+ F G++VTREYYIND G Q++ LA Sbjct: 121 GKKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFVGFDVTREYYINDGGGQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + + +G YPG YL VG+ L K + PEE WL +++++ Sbjct: 181 SVYLRYLEA-HGQEVAFVDGTYPGDYLVPVGEALKAKVGDAYVGQPEEVWLEEIRNFATD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL +L ++ D F SE + I + +L +G +YEG+L PPK K Sbjct: 240 AMMDLIREDLASLGVKMDKFFSEKSLY--GTGLIEAALKSLDDKGLIYEGVLEPPKGKKP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + R+Q LF+ST GDDVDRP+ KSDG++TYFA D+AY K ERGFD +I V G+D Sbjct: 298 DDWE-PREQTLFKSTDHGDDVDRPVKKSDGAWTYFAPDIAYHYDKVERGFDMLIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+SE K +++ LC+LV+L++DG KMSKRAG F+TLR VVD VG Sbjct: 357 HGGYVKRMKAAVSALSEGKVPLDIKLCQLVKLFKDGQEFKMSKRAGTFVTLRDVVDAVGP 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RFM+L RKN + DFD K EQSK+NPVFYVQYA AR S R+A++ +D Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPVFYVQYANARICSSLRKAEEAGIAVDDAT 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + D ++L + +AE+PR++E A EP+++AFYLYDLAS HG + G Sbjct: 477 LAAADLSL--LDDDAQLAVAKKIAEWPRLVEIAARTNEPHRVAFYLYDLASELHGLYHLG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + N LRFV ++ T ++ L V+ +I++GL I+GV EM Sbjct: 535 KTNEGLRFVNESSASATHAKMALAKTVSIVISAGLGILGVTPAQEM 580 >gi|99080744|ref|YP_612898.1| arginyl-tRNA synthetase [Ruegeria sp. TM1040] gi|122984355|sp|Q1GI80|SYR_SILST RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|99037024|gb|ABF63636.1| arginyl-tRNA synthetase [Ruegeria sp. TM1040] Length = 580 Score = 626 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 259/586 (44%), Positives = 370/586 (63%), Gaps = 7/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF D + + + L + + + + + + +E PRD AHG ++TNAAM+L++P + Sbjct: 1 MNLFTDIRTLVIDSLAAMTAEGALPEGLDFANVTVEPPRDAAHGDMATNAAMVLAKPAKM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + A++ D + S +AG GF+NL L S + +L + + YGR+ +G+ Sbjct: 61 KPRDIAEALAAKLAQDKRITSAEVAGPGFLNLRLDLSVWQDVLGKALNAEEAYGRSDMGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGP+HVGH R AV GD LASL+ F+GY+VTREYYIND GAQ++ LA Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGYDVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY +A + + P+G YPG YLK VG L DK+ + PEE WL V++++ Sbjct: 181 SAYLRYLEA-HGQSVEFPDGTYPGEYLKDVGAALKDKFGDRFVGQPEETWLEEVRNFATD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM +IR+DL L ++ D+F SE + I +++L +G +YEG+L PPK K Sbjct: 240 MMMDLIREDLALLGVEMDVFYSEKSLY--GTGRIEAALESLDAKGLIYEGVLEPPKGKKP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + R Q LF+ST GDDVDRP+ KSDG++TYFA D+AY K RGFD +I + G+D Sbjct: 298 DDWE-PRIQTLFKSTEHGDDVDRPVKKSDGAWTYFAPDIAYHYDKVSRGFDMLIDIFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ K ++V LC+LV+L++DG KMSKRAG F+TLR VVD VG+ Sbjct: 357 HGGYVKRMKAAVSALSDGKVPLDVKLCQLVKLFKDGQEFKMSKRAGTFVTLRDVVDAVGA 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RFM+L RKN + DFD K EQSK+NPVFYVQYA AR S R+A++ D Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPVFYVQYANARIHSTLRKAREAGIACDEAT 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + ++L + +AE+PR +E A EP+++AF+LY+LAS HG + G Sbjct: 477 LSGADLSL--LTHDAQLAVARKVAEWPRQVEIAARTNEPHRIAFFLYELASDLHGLYHLG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + LRFV ++ T L L AV+ +I++GL I+GV+ EM Sbjct: 535 KSEESLRFVNESSELATHANLALARAVSIVISAGLGILGVKPAQEM 580 >gi|259419075|ref|ZP_05742992.1| arginyl-tRNA synthetase [Silicibacter sp. TrichCH4B] gi|259345297|gb|EEW57151.1| arginyl-tRNA synthetase [Silicibacter sp. TrichCH4B] Length = 580 Score = 625 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 257/586 (43%), Positives = 371/586 (63%), Gaps = 7/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF D + + + L + + + + + + +E PRD AHG ++TNAAM+L++P + Sbjct: 1 MNLFTDIRTLVIDSLAAMTAEGALPEGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAKM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + A++ D + S +AG GF+NL L S + +L + G YGR+ +G+ Sbjct: 61 KPRDIAEALAAKLGQDARITSAEVAGPGFLNLRLDLSVWQSVLGKALHEGEAYGRSDMGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGP+HVGH R AV GD LASL+ ++GY+VTREYYIND GAQ++ LA Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDYAGYDVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY +A + + P+G YPG YLK VG L +K+ + PE+ WL V+ ++ + Sbjct: 181 SAYLRYLEA-HGQSVEFPDGTYPGEYLKDVGAALKEKFGDTFVGQPEDVWLEEVRAFATE 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM +IR+DL L ++ D+F SE + I +++L +G +YEG+L PPK K Sbjct: 240 MMMDLIREDLGLLGVKMDVFYSEKSLY--GTGRIEAALESLDAKGLIYEGVLEPPKGKKP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + R Q LF+ST GDDVDRP+ KSDG++TYFA D+AY K RGFD +I + G+D Sbjct: 298 DDWE-PRVQTLFKSTAHGDDVDRPVKKSDGAWTYFAPDIAYHYDKVSRGFDMLIDIFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ + +++ LC+LV+L++DG KMSKRAG F+TLR VVD VG+ Sbjct: 357 HGGYVKRMKAAVSALSDGQVPLDIKLCQLVKLFKDGQEFKMSKRAGTFVTLRDVVDAVGA 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RFM+L RKN + DFD K EQSK+NPVFYVQYA AR S R+A++ D Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPVFYVQYANARIHSTLRKAREAGIACDDAT 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + Q ++L + +AE+PR +E A EP+++AF+LYDLAS HG + G Sbjct: 477 LNAADLSQ--LTHEAQLSVARKIAEWPRQVEIAARTNEPHRIAFFLYDLASDLHGLYHLG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + LRFV ++ T L L AV+ +I++GL I+GV+ EM Sbjct: 535 KSEESLRFVNESSESATHANLALARAVSIVISAGLGILGVKPAQEM 580 >gi|149202735|ref|ZP_01879707.1| arginyl-tRNA synthetase [Roseovarius sp. TM1035] gi|149144017|gb|EDM32051.1| arginyl-tRNA synthetase [Roseovarius sp. TM1035] Length = 581 Score = 625 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 262/586 (44%), Positives = 375/586 (63%), Gaps = 7/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF D + L + ++ + + + +E PRD AHG ++TNAAM+L++P GL Sbjct: 1 MNLFTDMRDLVLETLAAMQAGGQLPAGLDMTSVTVEPPRDAAHGDMATNAAMVLAKPAGL 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ + AR+ D V+S +AG GF+NL L P+ +++ + + G YGR+ +G Sbjct: 61 KPREIADALAARLAEDGRVESAEVAGPGFLNLRLVPAVWQRVARAALTEGTGYGRSTLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGP+HVGH R AV GD LA L+ + GYEVTREYYIND GAQ++ LA Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALARLLDYVGYEVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + +G YPG YL VG+ L + + PEE WL ++D++ Sbjct: 181 SVYLRYLEA-HGQAVAFADGTYPGDYLIEVGEALKVQVGDAYVGQPEEVWLEPIRDFATD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM +IR+DL AL ++ D+F SE + I I++L +G +Y G+L PPK K Sbjct: 240 KMMALIREDLAALGVEMDVFYSEKSLY--GTGLIEAAIEDLRSKGLIYRGVLEPPKGKMP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP++KSDG +TYFA D+AY K RGFD +I V G+D Sbjct: 298 EDWE-PREQTLFKSTEHGDDVDRPIMKSDGGWTYFAPDIAYHYDKISRGFDLLIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S + +++ LC+LV+LY++G P KMSKRAG F+TLR VVD+VG+ Sbjct: 357 HGGYVKRMKAAVSALSNGRVPVDIKLCQLVKLYKNGEPFKMSKRAGTFVTLRDVVDQVGA 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN LDFDF KV EQSK+NPVFYVQYA AR S+ R+A + ++ Sbjct: 417 DVTRFVMLTRKNDAPLDFDFDKVLEQSKDNPVFYVQYANARVNSVLRKAAEAGIAVEDAT 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + +EL + +AE+PR++E A + EP+++AFYLYDLAS H W+ G Sbjct: 477 LAQADLS--GLTHEAELAVARKIAEWPRLVEIAGRSNEPHRVAFYLYDLASDLHALWNRG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ LRF+Q + + ++ L AV +I++GL I+GV EM Sbjct: 535 NDDASLRFIQEGDVATSQAKIALARAVTVVISAGLGILGVTPAEEM 580 >gi|56697351|ref|YP_167719.1| arginyl-tRNA synthetase [Ruegeria pomeroyi DSS-3] gi|81349499|sp|Q5LQI6|SYR_SILPO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|56679088|gb|AAV95754.1| arginyl-tRNA synthetase [Ruegeria pomeroyi DSS-3] Length = 581 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 263/586 (44%), Positives = 382/586 (65%), Gaps = 7/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF + + L+++ + + + + + +E PRD AHG ++TNAAM+L++P G Sbjct: 1 MNLFTEMRGLVLEALEQMQAEGALPQGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAGQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + AR+ D V +AG GF+NL L+ ++++ ++++ G YGR+ +G+ Sbjct: 61 KPRDIAETLAARLAADARVAKAEVAGPGFLNLTLAAPVWQRVVGTVLLDGTAYGRSDMGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGP+HVGH R AV GD LASL+ ++GY+VTREYYIND GAQ++ LA Sbjct: 121 GKKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDYAGYQVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + + +G YPG YL VG+ L DK + PEE WL ++D++ Sbjct: 181 SVYLRYLEA-HGQAVEFVDGTYPGEYLVEVGQALKDKVGDAYVGQPEEVWLEAIRDFATD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM++IR DL L ++ D+F SE + I ID+L +G +Y G L PPK K Sbjct: 240 AMMELIRADLAQLGVKMDVFYSEKSLY--GTGRIEAAIDSLRAKGLIYRGTLEPPKGKLP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP++KSDG++TYFA D+AY K RGFD +I V G+D Sbjct: 298 EDWE-PREQTLFKSTEHGDDVDRPIMKSDGAWTYFAPDIAYHYDKVSRGFDALIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ + +++ LC+LV+L+++G P KMSKRAG+F+TLR VVD+VG+ Sbjct: 357 HGGYVKRMKAAVSALSDGRVPLDIKLCQLVKLWKNGEPFKMSKRAGNFVTLRDVVDQVGA 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN LDFDF KV EQS+ENPVFYVQYA+AR S+ R+A + +D Sbjct: 417 DVTRFVMLTRKNDAPLDFDFDKVLEQSRENPVFYVQYAHARVSSVLRRAAEAG--IDTSD 474 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 +EL ++ LAE+PR++E A EP+++AFYLY+LA FH W+ G Sbjct: 475 TALRAADLGLLGHEAELAVMRKLAEWPRLVEIAARTNEPHRIAFYLYELAGDFHALWNRG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + LRF+Q + + ++ L +VA +I++GL I+GV EM Sbjct: 535 NDVSELRFIQDGDEGTSQAKIALARSVAVVISAGLAILGVTPAEEM 580 >gi|300022780|ref|YP_003755391.1| arginyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888] gi|299524601|gb|ADJ23070.1| arginyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888] Length = 586 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 279/586 (47%), Positives = 386/586 (65%), Gaps = 2/586 (0%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F++ +R++ L+ + + + + L E PRD +HG ++ NAA++L++ Sbjct: 1 MNVFSEVEARVRAALEALKTEGVLPSDLALPEFDAEPPRDASHGDIAVNAALVLAKAAKK 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ + A+++ D+ + +AG GF+N+ P ++ I+ G YG Sbjct: 61 KPRDIADALKAKLEAHGDIQKIEVAGPGFLNITFKPEVWHGLVRDILSEGGRYGAGSSRG 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 K+N+E+VSANPTGPMHVGHCR AV GD LA+L+ F+GY+VTREYYINDAG Q+N LA Sbjct: 121 DGKLNVEYVSANPTGPMHVGHCRGAVFGDALANLLVFAGYDVTREYYINDAGGQVNVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S F RY++AL + +PEG YPG YLK VG+ LA ++ L+N PEE+WLPIV+ +++ Sbjct: 181 SAFLRYREALGEDIGAIPEGLYPGDYLKPVGEALAKEHGPSLINMPEERWLPIVRSIAIE 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM +I+DDL ALNI+HD+F SE I+ I L ++G +YEG L PK Sbjct: 241 KMMAMIKDDLAALNIRHDVFFSEASLQADGKDQIKAAIAELEKKGLIYEGKLEKPKGHDD 300 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + DR Q LF+ST GDD DR L KSDG+YTYFA D+AY K RGF ++I V G+D Sbjct: 301 DDWE-DRVQTLFKSTDFGDDEDRALKKSDGTYTYFAGDVAYHYDKLSRGFRHLINVFGAD 359 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ R++AV AA+S+K A ++V + +LVRL++ G P KMSKRAG F+TLR VVDEVG Sbjct: 360 HVGYIPRIKAVVAALSDKTADLDVKVVQLVRLFKAGEPYKMSKRAGTFVTLRDVVDEVGR 419 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VR+MML+RKN E LDFDF KV EQSK+NPVFYVQYA+AR S+ R A + P LD + Sbjct: 420 DPVRYMMLYRKNQETLDFDFAKVTEQSKDNPVFYVQYAHARSASVLRNAVEQIPGLDVSV 479 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 DT E+ LI LA +PR++E A A EP+++AFYLYDLAS H W+ G Sbjct: 480 DVLRRADLSLLTDTGEIDLIKRLASFPRLVEGAASAHEPHRIAFYLYDLASALHSQWTRG 539 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++P LRF+Q+N+ T RL L+ A ++I SGL+++GVE+P+ M Sbjct: 540 NDSPHLRFIQSNDGVATSARLALIAATKTVIKSGLDVLGVEAPDAM 585 >gi|163741411|ref|ZP_02148802.1| arginyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10] gi|161385145|gb|EDQ09523.1| arginyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10] Length = 581 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 263/586 (44%), Positives = 371/586 (63%), Gaps = 7/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF D S + + L + + + + + + +E PRD AHG ++TNAAM+L++P + Sbjct: 1 MNLFTDIRSLVLDCLTAMVAEGTLPEGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAKM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ + ++ D V S +AG GF+NL L S + +L +++ I++GR+ +G Sbjct: 61 KPRDIADALAGKLAADARVTSAEVAGPGFLNLRLDRSSWQSVLGAVLAEDIKFGRSDLGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGP+HVGH R AV GD LASL+ F GY+VTREYYIND G Q++ LA Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFVGYDVTREYYINDGGGQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + + +G YPG YL VG+ L DK +N PE+ WL +++++ Sbjct: 181 SVYLRYLEA-HGQEVAFVDGTYPGDYLVPVGQALKDKVGDAYVNQPEDVWLEEIRNFATD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL +L IQ D F SE + I + +L +G +YEG+L PPK K Sbjct: 240 AMMDLIRADLASLGIQMDKFFSEKSLY--GTGLIESALKSLDDKGLIYEGVLEPPKGKKP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + R+Q LF+ST GDDVDRP+ KSDG++TYFA D+AY K ERGFD +I + G+D Sbjct: 298 DDWE-PREQTLFKSTEHGDDVDRPVKKSDGAWTYFAPDIAYHYDKVERGFDMLIDIFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ + +++ LC+LV+L++DG KMSKRAG F+TLR VVD VG Sbjct: 357 HGGYVKRMKAAVSALSDGRVPLDIKLCQLVKLFKDGQEFKMSKRAGTFVTLRDVVDAVGP 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RFM+L RKN + DFD K EQSK+NPVFYVQYA AR S R+A + + D Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPVFYVQYANARICSTLRKAAEAG--IATDD 474 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 D ++L + LAE+PR++E A EP+++AFYLYDLAS HG + G Sbjct: 475 ATLAAADLTLLQDDAQLTVAKKLAEWPRLVEIAARTNEPHRVAFYLYDLASELHGLYHLG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + N LRFV +N T ++ L AV+ +I++GL I+GV EM Sbjct: 535 KTNEGLRFVNESNPSATHAKMALAKAVSIVISAGLGILGVTPAQEM 580 >gi|310816694|ref|YP_003964658.1| arginyl-tRNA synthetase [Ketogulonicigenium vulgare Y25] gi|308755429|gb|ADO43358.1| arginyl-tRNA synthetase [Ketogulonicigenium vulgare Y25] Length = 580 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 267/586 (45%), Positives = 384/586 (65%), Gaps = 8/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF + + L ++ + + + D + +E PRD HG ++TNAAM+L++P G+ Sbjct: 1 MNLFTQMRALVIACLDQLATEGVIPAGLPTDNVAVEPPRDAGHGDMATNAAMVLAKPAGV 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ + A++ +DP V S +AG GF+NL LS + ++ +++ +GR+ +G Sbjct: 61 QPRVIADALAAKLVLDPRVASAEVAGPGFLNLRLSADIWQGVVKAVLSD-AGFGRSTLGA 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGPMHVGH R AV GD LASL+A++GY+VTREYYIND GAQ++ LA Sbjct: 120 GKRVNVEYVSANPTGPMHVGHTRGAVFGDALASLLAYAGYDVTREYYINDGGAQVDVLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++A + D+ EG YPG YL VG+ L +KY LL+ E+ WL +++++ Sbjct: 180 SAYERYREA-HGQQPDIREGLYPGDYLIEVGQALKEKYGDTLLDKGEQYWLAEIREFATL 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM++IR DL LN++ D+F SE + I I L QG +YEG+L PPK K Sbjct: 239 QMMEMIRGDLAMLNVKMDVFSSEKALY--GTGKIEAAIAKLEEQGLIYEGVLEPPKGKLP 296 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LFRST+ GDDVDRP+ KSDG +TYFA D+AY K +RGFD +I V G+D Sbjct: 297 EDWE-PREQTLFRSTLHGDDVDRPIKKSDGQWTYFAPDIAYHYDKVQRGFDLLIDVFGAD 355 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S +++ L +LV+L+++G P KMSKRAG F+TLR VV++ G+ Sbjct: 356 HGGYVKRMKAAVSALSGGTVPLDIKLIQLVKLFKNGEPFKMSKRAGTFVTLRDVVEQAGA 415 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN LDFDF KV EQSK+NPVFYVQYA+AR S+ R+A+ LD Sbjct: 416 DVTRFVMLTRKNDAPLDFDFDKVLEQSKDNPVFYVQYAHARVHSVLRRAQAAG--LDVSD 473 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 +EL+++ LAE+PR+IE A EP+++AFYLY+LAS FHG W+ G Sbjct: 474 AALIGADLTRVGHEAELKVMRQLAEWPRLIEIAARGNEPHRIAFYLYELASDFHGLWNRG 533 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ LRF+Q + + + ++ L+ AVA +I+ GL I+GV EM Sbjct: 534 NDDTALRFLQEGDAETSQAKIALIRAVAVVISEGLGILGVTPVEEM 579 >gi|86138649|ref|ZP_01057222.1| arginyl-tRNA synthetase [Roseobacter sp. MED193] gi|85824709|gb|EAQ44911.1| arginyl-tRNA synthetase [Roseobacter sp. MED193] Length = 581 Score = 624 bits (1609), Expect = e-176, Method: Composition-based stats. Identities = 264/586 (45%), Positives = 376/586 (64%), Gaps = 7/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEK-KILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF+D + + + L + + + + + + +E PRD AHG ++TNAAM+L++P + Sbjct: 1 MNLFSDIRALVIDSLTAMTAEGALPEGQDFANVAVEPPRDSAHGDMATNAAMVLAKPAKM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ + A++ D + S +AG GF+NL LSP + +L +++ G++YGR +G+ Sbjct: 61 KPRDIADALAAKLAQDARIASAEVAGPGFLNLRLSPVVWQSVLGAVLEGGLDYGRANLGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGP+HVGH R AV GD LASL+ ++GY+VTREYYIND G Q++ LA Sbjct: 121 GKKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLGYAGYDVTREYYINDGGGQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + + +G YPG YLK VG L DK LN E+ WL V+++S Sbjct: 181 SVYLRYLEA-HGQEVAFADGTYPGDYLKPVGAALKDKVGDAYLNKGEDVWLSEVREFSTD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL L I+ D+F SE + I ++ L +G +Y+G+L PPK K Sbjct: 240 AMMDLIREDLALLGIKMDVFYSEKSLY--GTGRIEAALEELESKGLIYQGVLEPPKGKKP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + R+Q LF+ST GDDVDR + KSDG++TYFA D+AY K RGFD +I V G+D Sbjct: 298 DDWE-PREQTLFKSTDHGDDVDRAVKKSDGAWTYFAPDIAYHYDKVSRGFDELIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ K +++ LC+LV+L++DG KMSKRAG F+TLR VVD VG+ Sbjct: 357 HGGYVKRMKAAVSALSDGKVPLDIKLCQLVKLFKDGQEFKMSKRAGTFVTLRDVVDAVGA 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RFM+L RKN + DFD K EQSK+NP+FYVQYA AR S R+A + D + Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPIFYVQYANARICSTLRKAGEADIATDDAV 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + Q S ++L ++ LAE+PR IE A EP+++AFYLYDLAS HG + G Sbjct: 477 LGAADLAQVS--HPAQLAVVKKLAEWPRQIEIAARTNEPHRVAFYLYDLASELHGLYHLG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + LRFV ++ T L L +V+ +I++GL I+GV+ EM Sbjct: 535 KTEFGLRFVNESSETATHANLALARSVSIVISAGLGILGVKPAQEM 580 >gi|149914960|ref|ZP_01903489.1| arginyl-tRNA synthetase [Roseobacter sp. AzwK-3b] gi|149811148|gb|EDM70985.1| arginyl-tRNA synthetase [Roseobacter sp. AzwK-3b] Length = 581 Score = 623 bits (1608), Expect = e-176, Method: Composition-based stats. Identities = 270/586 (46%), Positives = 377/586 (64%), Gaps = 7/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF + + L + + K+ + + + +E PRD AHG ++TNAAM+L++P GL Sbjct: 1 MNLFTEIHGLVLAELGRLQAEGKLPEALDFANVAVEPPRDPAHGDMATNAAMVLAKPAGL 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + AR+ D ++S +AG GF+NL LS ++ + + G +GR+ +G Sbjct: 61 QPRAIAEDLAARLLEDDRIESADVAGPGFLNLRLSSGMWHAVVRAALQDGEAFGRSAMGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGP+HVGH R AV GD LASL+ + GYEVTREYYIND GAQ++ LA Sbjct: 121 GKKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDYVGYEVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + +G YPG YL VG+ L + + ++ PE+ WL V+ ++ Sbjct: 181 SVYLRYLEA-HGQAVAFEDGTYPGDYLIEVGEALKAEVGAAYVDQPEDVWLAEVRSFATD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM +IRDDLK+L ++ D+F SE + I + +L +G +YEG+L PPK KT Sbjct: 240 RMMDLIRDDLKSLGVEMDVFFSEKSLY--GTGLIEKALKSLEDRGLIYEGVLEPPKGKTP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LFRST GDDVDRP+ KSDGS+TYFA D+AY K RGFD +I V G+D Sbjct: 298 EDWE-PREQTLFRSTDYGDDVDRPVKKSDGSWTYFAPDIAYHYDKITRGFDKLIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A A+S+ + +++ LC+LV+LY++G P KMSKRAG F+TLR VVD+VG Sbjct: 357 HGGYVKRMKAAVGALSDNRVPLDIKLCQLVKLYKNGEPFKMSKRAGTFVTLRDVVDQVGP 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN LDFDF KV EQSK+NPVFYVQYA AR S+ R+A++ D++ Sbjct: 417 DVTRFVMLTRKNDAPLDFDFDKVLEQSKDNPVFYVQYANARVNSVLRKAREAGIDVEDAT 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + EL + LAE+PR+ E A EP+++AFYLYDLAS H W+ G Sbjct: 477 LAKADLS--GLVHEVELAVARKLAEWPRMAELAGRTHEPHRVAFYLYDLASDLHALWNRG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P LRF+Q +N + ++ L +V +I+SGL I+GV EM Sbjct: 535 NDEPALRFLQEDNPATSQAKIALARSVTVVISSGLGILGVTPAEEM 580 >gi|254462799|ref|ZP_05076215.1| arginyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083] gi|206679388|gb|EDZ43875.1| arginyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083] Length = 577 Score = 623 bits (1607), Expect = e-176, Method: Composition-based stats. Identities = 263/586 (44%), Positives = 380/586 (64%), Gaps = 11/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF D S + L+ + + + + + +E PRD AHG ++TNAAM+L++P + Sbjct: 1 MNLFDDIRSAVLTSLEAMQAQGVLPADLDFANVAVEPPRDGAHGDMATNAAMVLAKPAKM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ + + +DP ++SV +AG GF+N+ LS + + ++ +++ G ++GR+ +G+ Sbjct: 61 KPRDIADALARHLILDPRIESVDVAGPGFLNMRLSSALWQGVIGTVLDQGADFGRSDMGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGP+HVGH R AV GD LASL+ ++GY VTREYYIND GAQ++ LA Sbjct: 121 GKKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDYAGYAVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + + +G YPG YL VG+EL +K S + E WL V+++S + Sbjct: 181 SVYLRYLEA-HGQEVAFEDGTYPGDYLIPVGEELKEKVSDAYVGKHESDWLLDVREFSTE 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM ++R DL +L I+ D+F SE + I ID L +G +YEG+L PPK K Sbjct: 240 KMMDLVRADLASLGIEMDVFYSEKSLY--GTGRIEAAIDALKDKGLIYEGVLEPPKGKKP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP++KSDG++TYFA D+AY K RGFD +I V G+D Sbjct: 298 EDWE-PREQTLFKSTEHGDDVDRPVMKSDGAWTYFAPDIAYHYDKVSRGFDMLIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ K +++ L +LV+L+++G P KMSKRAG F+TLR VVD+VG+ Sbjct: 357 HGGYVKRMKAAVSALSDGKVPLDIKLTQLVKLFKNGEPFKMSKRAGTFVTLRDVVDQVGA 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 + RF ML RKN LDFDF KV EQSK+NPVFYVQYA AR S+ R+A D DL Sbjct: 417 GATRFHMLTRKNDAPLDFDFDKVLEQSKDNPVFYVQYANARVHSVLRKASDAGLDL---- 472 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 +E+ + LAE+PR++ A EP+++AFYLYDLAS FH ++ G Sbjct: 473 --SATPDLTQLNHEAEIAVAKKLAEWPRLVALAARTNEPHRIAFYLYDLASEFHALYNRG 530 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 E P LRF+Q ++ ++ L +V+ +I +GL I+GV+ EM Sbjct: 531 NELPELRFLQDGQDATSISKIALARSVSVVICAGLGILGVDPVEEM 576 >gi|260427188|ref|ZP_05781167.1| arginyl-tRNA synthetase [Citreicella sp. SE45] gi|260421680|gb|EEX14931.1| arginyl-tRNA synthetase [Citreicella sp. SE45] Length = 585 Score = 621 bits (1602), Expect = e-176, Method: Composition-based stats. Identities = 261/586 (44%), Positives = 387/586 (66%), Gaps = 8/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF D + + ++ + + + + + + +E PRD HG ++TNAAM+L++P Sbjct: 6 MNLFTDIRALVLQAIEALQAEGILPEGLNTAPVTVEPPRDPLHGDMATNAAMVLAKPAKA 65 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + A+I D + + +AG GF+NL L+PS + + +++ G ++GR+ +G+ Sbjct: 66 RPRDIAEALAAKIGADDRIVAAEVAGPGFLNLRLAPSVWQALPGAVLTQGTDFGRSDMGQ 125 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G ++N+E+VSANPTGP+HVGH R AV GD LASL+ F+GY+VTREYYIND GAQ++ LA Sbjct: 126 GARINVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGYDVTREYYINDGGAQVDVLAR 185 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +AL ++ + +G YPG YL VG+ LA + + ++ PEE WL +++++ Sbjct: 186 SVYLRYLEAL-GHEVEFADGTYPGDYLIPVGEMLAARVGEQYVDQPEEVWLEEIRNFATD 244 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MMK+IR+DLK L ++ D F SE + I I++L +G +Y G+L PPK KT Sbjct: 245 EMMKLIREDLKLLGVEMDHFFSEKSLY--GTGRIEAAIESLDAKGLIYRGVLEPPKGKTP 302 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP+ KSDG++TYFA D+AY K RGFD +I V G+D Sbjct: 303 EDWE-PREQTLFKSTEHGDDVDRPIKKSDGAWTYFAPDIAYHYDKVSRGFDQLIDVFGAD 361 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ K +++ L +LV+L+++G P KMSKRAG F+TLR VV+EVG Sbjct: 362 HGGYVKRMKAAVSALSDGKTPLDIKLIQLVKLFKNGEPFKMSKRAGTFVTLRDVVEEVGP 421 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN LDFDF K EQSKENPVFYVQYA+AR S+ R+A + D+ Sbjct: 422 DVTRFVMLTRKNDASLDFDFAKAVEQSKENPVFYVQYAHARICSVMRKAVEQGIDVSDAA 481 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 R + + +EL L+ +AE+PR++E A EP+K+A +L +LAS HG W+ G Sbjct: 482 LARADLT--ALDHEAELGLMKKVAEWPRLVEIAAKGHEPHKVAIWLNELASELHGLWNRG 539 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P LRF+Q ++ + + ++ L +VA +I++GL I+GV EM Sbjct: 540 HDEPGLRFLQ-DDAETSQRKIALARSVAVVISAGLGILGVTPAEEM 584 >gi|294676411|ref|YP_003577026.1| arginyl-tRNA synthetase [Rhodobacter capsulatus SB 1003] gi|294475231|gb|ADE84619.1| arginyl-tRNA synthetase [Rhodobacter capsulatus SB 1003] Length = 581 Score = 621 bits (1601), Expect = e-175, Method: Composition-based stats. Identities = 266/586 (45%), Positives = 383/586 (65%), Gaps = 7/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFAD + + L + + + + + + +E PRD AHG ++TNAAM+L++P G Sbjct: 1 MNLFADVRAVVLAALDAMVAEGALPAGLDTQAVAVEPPRDAAHGDMATNAAMVLAKPAGT 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +AE +VA++ D + S +AG GFINL L+P ++ + + +G ++GR+ +G+ Sbjct: 61 NPRALAEGLVAKLAADARIVSAEVAGPGFINLRLAPGLWADVVRAALTAGSDFGRSTLGR 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGPMHVGH R AV GD LASL+ F+GY+VTREYYIND GAQ++ LA Sbjct: 121 GIKVNVEYVSANPTGPMHVGHTRGAVFGDALASLLDFAGYDVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++A + ++ EG YPG YL VG+ L +KY + L++ PE WL V+ ++ + Sbjct: 181 SAYERYREA-NGLEPEIREGLYPGDYLIPVGEALKEKYGASLIDKPESDWLAEVRVFATE 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL L ++ D+F SE + I + L G +YEG+L PPK K Sbjct: 240 AMMAMIREDLALLGVKMDVFYSEKSLY--GTGQIEAALQRLQDLGLIYEGVLEPPKGKLP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + +R+Q LFRST GDDVDRP+ KSDG++TYFA D+AY K ERGFD +I V G+D Sbjct: 298 EDWE-EREQTLFRSTSYGDDVDRPVKKSDGAWTYFAPDIAYHWTKIERGFDQLIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A AA+SE + +++ L +LV+L+++G P KMSKRAG F+TLR VV++ G+ Sbjct: 357 HGGYVKRMKAAVAALSENRVPLDIKLIQLVKLFKNGEPFKMSKRAGTFVTLRDVVEQAGA 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 RF ML RKN LDFDF KV EQSK+NPVFYVQYA+AR S+ R+A D+ +D Sbjct: 417 GVTRFHMLTRKNDAPLDFDFDKVLEQSKDNPVFYVQYAHARVASVLRKAVDLG--IDVTD 474 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + +E L +AE+PR +E A A EP+++AF+LY++AS H W+ G Sbjct: 475 AALAAADLDRNTHEAERALAKKIAEWPRQVEIAARANEPHRVAFFLYEIASDLHALWNRG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P LRF+Q + + ++ L A A +I++GL I+GV EM Sbjct: 535 NDEPSLRFLQEGDLAASSAKIALARASAVVISAGLGILGVTPAEEM 580 >gi|110680351|ref|YP_683358.1| arginyl-tRNA synthetase [Roseobacter denitrificans OCh 114] gi|123361735|sp|Q164C1|SYR_ROSDO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|109456467|gb|ABG32672.1| arginyl-tRNA synthetase [Roseobacter denitrificans OCh 114] Length = 580 Score = 618 bits (1594), Expect = e-175, Method: Composition-based stats. Identities = 268/586 (45%), Positives = 389/586 (66%), Gaps = 8/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFA+ + + + ++ ++ + + + +E PRD AHG ++TNAAM+L++P G Sbjct: 1 MNLFAEMRALVLECVDQMVTAGQLPADLNMTNVTVEPPRDAAHGDMATNAAMVLAKPAGK 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + + D + S +AG GF+NL ++P+ R +L S++ G ++GR IG Sbjct: 61 KPRDIAEALAQLLAADARIASAEVAGPGFLNLRIAPTAWRAVLLSVLDKGTDFGRADIGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGP+HVGH R AV GD LASL+ ++G++VTREYYIND GAQ++ LA Sbjct: 121 GQKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDYAGFDVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + + P+G YPG YL VG++L D + PEE WL ++ ++ Sbjct: 181 SVYLRYLEA-HGQEVAFPDGTYPGDYLIPVGQQLKDLKGDSYVGQPEEAWLQDIRTFATD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DLK+L ++ D+F SE + I I++L +G +Y+G+L PPK K Sbjct: 240 AMMDLIRADLKSLGVEMDVFYSEKSLY--GTGRIEAAIEDLKSKGLIYDGVLEPPKGKKP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP++KSDGS+TYFA D+AY K RG+D +I V G+D Sbjct: 298 EDWE-PREQTLFKSTEHGDDVDRPVMKSDGSWTYFAPDIAYHYDKVSRGYDALIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ K +++ L +LV+L+++G P KMSKRAG F+TLR VVD+VG Sbjct: 357 HGGYVKRMKAAVSALSDGKVPLDIKLTQLVKLFKNGEPFKMSKRAGTFVTLRDVVDQVGP 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN +LDFDF KV EQS+ENPVFYVQYA+AR S+ R+A+ +D D Sbjct: 417 DVARFVMLTRKNDAMLDFDFDKVMEQSRENPVFYVQYAHARVASVMRKAEAAGIAVDMDT 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + +EL LI L+E+PR++E A + EP+++AFYLY+L+ VFHG W+ G Sbjct: 477 LKAADLSL--LNHEAELGLIAKLSEWPRLVETAARSNEPHRVAFYLYELSGVFHGLWNRG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P LRFVQ ++ K+T ++ L A + +I +GL I+GV EM Sbjct: 535 NDVPELRFVQ-DDPKVTQAKIALARACSVVIAAGLGILGVTPAQEM 579 >gi|255263999|ref|ZP_05343341.1| arginyl-tRNA synthetase [Thalassiobium sp. R2A62] gi|255106334|gb|EET49008.1| arginyl-tRNA synthetase [Thalassiobium sp. R2A62] Length = 579 Score = 617 bits (1591), Expect = e-174, Method: Composition-based stats. Identities = 260/586 (44%), Positives = 372/586 (63%), Gaps = 9/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFA+ + + L+ + + + +D + +E PRD AHG ++TNAAM+L++P + Sbjct: 1 MNLFANIRTLVIESLEALVADGVLPADLNMDNVTVEPPRDAAHGDMATNAAMVLAKPAKM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + +++ + + +AG GF+NL L+ + ++ G YG++++G Sbjct: 61 KPRDIAEALATKLQDENRITVAEVAGPGFLNLRLADWVWQALVKKTYDGG--YGQSIMGT 118 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 GT+VN+E+VSANPTGP+HVGH R AV GD LASL+A++GY+VTREYYIND GAQ++ LA Sbjct: 119 GTRVNVEYVSANPTGPLHVGHVRGAVFGDALASLLAYAGYDVTREYYINDGGAQVDVLAR 178 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SVF RY +A + +G YPG YL +G+ L + + L+ E WL V++++ Sbjct: 179 SVFLRYLEA-NGQEVAFEDGTYPGDYLIPLGQALFEMHGDALVGKDEADWLEDVREFATD 237 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL AL I+ D+F SE + I I L +G +Y G L PPK K Sbjct: 238 AMMNLIRSDLAALGIEMDVFYSEKSLY--GTGQIEKSIAELDAKGLIYRGTLEPPKGKKP 295 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP+ KSDG++TYFA D+AY K R FD +I V G+D Sbjct: 296 EDWE-PREQTLFKSTEHGDDVDRPIQKSDGAWTYFAPDIAYHYDKISREFDELIDVFGAD 354 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ + ++V L +LV+L ++G P KMSKRAG FITLR VVD+VG Sbjct: 355 HGGYVKRMKAAVSALSDGQVPLDVKLTQLVKLTKNGEPFKMSKRAGTFITLRDVVDQVGP 414 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RK LDFDF KV EQSK+NPVFYVQYA+AR +S+ R+A + D+ D Sbjct: 415 DVTRFVMLTRKQDAPLDFDFDKVTEQSKDNPVFYVQYAHARVQSVLRKAVEANIDVSDDA 474 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + EL L +AE+PR++E A EP+++AFYLY+LA FH W+ G Sbjct: 475 LSS--VDLAGMTNEGELALAKKIAEWPRLVEIAARTNEPHRIAFYLYELAGEFHALWNRG 532 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + LRF Q + + T ++ L+ A A +I++GL I+GV NEM Sbjct: 533 NTDESLRFFQEGDSETTQAKIALIRAAAVVISAGLGILGVTPANEM 578 >gi|114762852|ref|ZP_01442284.1| arginyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601] gi|114544462|gb|EAU47469.1| arginyl-tRNA synthetase [Roseovarius sp. HTCC2601] Length = 580 Score = 611 bits (1575), Expect = e-172, Method: Composition-based stats. Identities = 264/586 (45%), Positives = 382/586 (65%), Gaps = 8/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF D + + ++ + + + + + + +E PRD HG ++TNAAM+L++P Sbjct: 1 MNLFTDIRALVLQAIEALQAEGALPEGLATAAVTVEPPRDPLHGDMATNAAMVLAKPAKA 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + A+I D VD +AG GF+NL L+PS + + ++ +G ++GR+ +G+ Sbjct: 61 KPRDIAEALAAKIAADDRVDHAEVAGPGFLNLRLAPSVWQALPQGVLAAGTDFGRSQMGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGP+HVGH R AV GD LASL+ F+GY+VTREYYIND GAQ++ LA Sbjct: 121 GAKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGYDVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A ++ + +G YPG YL VG++L ++ + PEE WL V++++ Sbjct: 181 SVYLRYLEA-QGHEVEFADGTYPGDYLIPVGEKLKEQVGDRYVGQPEEVWLEEVRNFATD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM +IR+DLK L ++ D F SE + I I++L +G +Y G+L PPK K Sbjct: 240 EMMALIREDLKMLGVEMDQFFSEKSLY--GTGRIEAAIESLDAKGLIYRGVLEPPKGKKP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP++KSDG++TYFA D+AY K RG+D +I V G+D Sbjct: 298 EDWE-PREQTLFKSTEHGDDVDRPIMKSDGAWTYFAPDIAYHYDKVSRGYDQLIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ K +++ L +LV+LY++G P KMSKRAG F+TLR VV+EVG Sbjct: 357 HGGYVKRMKAAVSALSDGKTPLDIKLIQLVKLYKNGEPFKMSKRAGTFVTLRDVVEEVGP 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN LDFDF K EQSKENPVFYVQYA+AR S+ R+A + D+ Sbjct: 417 DVTRFVMLTRKNDASLDFDFAKAVEQSKENPVFYVQYAHARICSVMRKATEAGVDVSDAA 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + S +EL L+ LAE+PR++E A EP+K+A +L +LAS H W+ G Sbjct: 477 LAGADVSVLS--HEAELGLMKKLAEWPRLVEIAAKGHEPHKVAIWLNELASDLHALWNKG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P LRF+Q ++ L+ ++ L AVA +I++GL I+GV EM Sbjct: 535 HDEPALRFLQ-DDAALSQSKIALARAVAVVISAGLGILGVTPVEEM 579 >gi|295707249|ref|YP_003600324.1| arginyl-tRNA synthetase [Bacillus megaterium DSM 319] gi|294804908|gb|ADF41974.1| arginyl-tRNA synthetase [Bacillus megaterium DSM 319] Length = 556 Score = 611 bits (1575), Expect = e-172, Method: Composition-based stats. Identities = 211/587 (35%), Positives = 335/587 (57%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + +LK +++ K + EK L +++E P+D HG STN AM L+R Sbjct: 1 MNIVEQVQQKLKAEIQDAVVKAGLAEKAELPEVLLETPKDKTHGDYSTNMAMQLARIAKK 60 Query: 60 DPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA ++ + IAG GFIN Y++ SYL +++ +IV +G YG+ +G Sbjct: 61 APRVIAEELVANFDKSKASIEKIDIAGPGFINFYMNNSYLTELIPTIVKAGEAYGQTNVG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G KV +EFVSANPTG +H+GH R A VGD+L +++ +GY+V+REYYINDAG QIN LA Sbjct: 121 NGQKVQVEFVSANPTGDLHLGHARGAAVGDSLCNVLEKAGYDVSREYYINDAGNQINNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 SV RY QAL + ++P Y G + ++GKELA ++ + +N EE+ + Y + Sbjct: 181 YSVEARYMQAL-GLEKEMPADGYHGADIINIGKELAKEHGDKYVNASEEERFEFFRQYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + ++ DL+ ++ D++ SE ++ D I ++ L +QG+VYE Sbjct: 240 DYELAKLKRDLEQFRVKFDVWYSETSLYKND--KISVALETLKKQGHVYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRST GDD DR L+K+DGS+TY D+AY + K +RGFD +I + G+ Sbjct: 288 ------EEGATWFRSTTFGDDKDRVLIKNDGSFTYLTPDIAYHQDKIQRGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ +K + V + ++V+LY++G +KMSKR G +T+R +V+EVG Sbjct: 342 DHHGYIPRMKAAIQALGYEKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTMRDLVEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ R LDFD QS ENPV+Y QYA+AR SI RQ +++ Sbjct: 402 LDATRYFFAMRSADTHLDFDLDLAVSQSNENPVYYAQYAHARICSILRQGEEMG------ 455 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + E +L+ + E+P+ + A + P+++ Y++DLAS FH ++ Sbjct: 456 IQSTSGADLSLISAEKETELLKKIGEFPQAVAEAATKRIPHRITNYVFDLASTFHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + ++N + + R++LV AV + + L +IGV +P +M Sbjct: 516 E------KVLDSDNVETSKARIELVKAVQVTLQNSLKLIGVSAPEKM 556 >gi|296284542|ref|ZP_06862540.1| arginyl-tRNA synthetase [Citromicrobium bathyomarinum JL354] Length = 581 Score = 610 bits (1574), Expect = e-172, Method: Composition-based stats. Identities = 266/587 (45%), Positives = 374/587 (63%), Gaps = 16/587 (2%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 ++A ++ R+ L ++ + + + + +E PRD AHG ++TNAAM+L++P +P Sbjct: 7 IYAAYAERIDAVLSALEAEGTLPPDVSRANVSVEPPRDPAHGDIATNAAMVLAKPAKTNP 66 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +AE IV +K DPD++S IAG GFINL ++ + +I G EYGR+ +GK T Sbjct: 67 RALAEQIVEHLKRDPDIESAEIAGPGFINLRIADRAWVDEIRAIGSLGGEYGRSSMGKDT 126 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 ++N+E+VSANPTGPMH+GHCR AVVGD LASL+ +G+ VTREYY+NDAG Q++ LA S Sbjct: 127 RINVEYVSANPTGPMHMGHCRGAVVGDALASLLDATGHSVTREYYVNDAGGQVDVLARSA 186 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 RY++AL + ++PEG YPG YL VGK LA+++ E PE +WLP+ + +V AM Sbjct: 187 HVRYREALGESVGEIPEGLYPGEYLIPVGKALAEEFGDEYAAAPESEWLPLFRPRAVAAM 246 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 M +IR DL L I HD+F SE + + L QG VY+G L PK KT + Sbjct: 247 MDLIRADLAKLGIAHDVFASEAELQA--AGKPAEAEAWLREQGLVYDGELEKPKGKTPED 304 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 + L FRST GDD DRP+ KS+GS+TYF ADLAY K E D +I + G+DH+ Sbjct: 305 WEPVELPL-FRSTQFGDDQDRPIKKSNGSWTYFGADLAYHMQKAE-NADALIDIWGADHA 362 Query: 362 GYVKRLEAVAAAVSEKKAQ---INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 G VKR++A AA+S+ + + +V L ++V+L RDG P+KMSKR+G+F+TL VVDEVG Sbjct: 363 GTVKRIKAAVAALSQGQGKPIPFDVKLVQMVQLMRDGEPVKMSKRSGNFVTLADVVDEVG 422 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D VRF ML RK +DFDF KV E SK+NPVFYVQYA+AR S R+A + Sbjct: 423 KDVVRFTMLTRKPEAQMDFDFAKVVEASKDNPVFYVQYAHARICSTMRKAAEEG------ 476 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L P + D + L+ A+YPR++E+A A+EP+++AFYLYDLA+ FH W+ Sbjct: 477 LAPSDEALDALTADD--VALVKLAAQYPRLVESAAQAREPHRIAFYLYDLAAAFHAFWNA 534 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G ++ R + +RKL+ RL LV + +I +GL ++GVE+ EM Sbjct: 535 GNDDSSKRVILTQDRKLSGARLYLVAQIGQVIRNGLGLLGVEAVEEM 581 >gi|114771796|ref|ZP_01449189.1| arginyl-tRNA synthetase [alpha proteobacterium HTCC2255] gi|114547612|gb|EAU50503.1| arginyl-tRNA synthetase [alpha proteobacterium HTCC2255] Length = 576 Score = 610 bits (1573), Expect = e-172, Method: Composition-based stats. Identities = 269/586 (45%), Positives = 381/586 (65%), Gaps = 12/586 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF+D + + L+ + + K++ + +E PRD +HG +STNAAM+L++P G+ Sbjct: 1 MNLFSDIRNLVLASLEILQSNGTLPKELNFSNVTVEPPRDASHGDMSTNAAMVLAKPAGM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P IA+ + + D V S +AG GF+NL L Y I+ ++ G YGR IG Sbjct: 61 NPRLIADALSLLLVNDERVISADVAGPGFLNLCLKQDYWTSIIPFVLNMGTNYGRATIGT 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTGP+HVGH R AV GD LASL+ F+G++VTREYYIND GAQ++ LA Sbjct: 121 GIKVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGFDVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + +G YPG YL +G +L +KY L++ PE +W+ ++ ++ + Sbjct: 181 SVYLRYLEA-NGQAVEFVDGTYPGDYLVELGVDLKNKYGDSLVDKPETEWIAELRLFATE 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM +IR DL L I+ D+F SE + I + +L +G VY+G+L PPK K Sbjct: 240 KMMDLIRSDLALLGIRMDVFFSEKSLY--GTGLIEAALADLDGKGLVYQGVLEPPKGKKP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + R+Q LF+ST GDDVDRP+ KSDGS+TYFA D+AY K +RGFD +I + G+D Sbjct: 298 DDWE-PREQTLFKSTEHGDDVDRPIAKSDGSWTYFAPDIAYHFDKVQRGFDQLIDIFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S ++ +++ L +LV+LY++G P KMSKRAG F+TLR VV++VG Sbjct: 357 HGGYVKRMKAAVSALSNQQVSLDIKLTQLVKLYKNGEPFKMSKRAGTFVTLRDVVEQVGP 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN LDFDF KV+EQSK+NPVFYVQYA+AR S+ +AKD +D Sbjct: 417 DVTRFVMLTRKNDAPLDFDFAKVQEQSKDNPVFYVQYAHARISSVLSKAKDANMKIDVKT 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 F S SE+ +I LAE+PR++E A EP+++AFYLY+LA FH W+ G Sbjct: 477 FK-------SLKHPSEITVIKKLAEWPRLLELAAKHNEPHRVAFYLYELAGDFHALWNIG 529 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +E P RF+Q +N +L+ +L +V AV I +GL I+GV +EM Sbjct: 530 KEAPETRFLQEDNPELSAEKLSMVSAVQLTIAAGLTILGVAPIDEM 575 >gi|294501901|ref|YP_003565601.1| arginyl-tRNA synthetase [Bacillus megaterium QM B1551] gi|294351838|gb|ADE72167.1| arginyl-tRNA synthetase [Bacillus megaterium QM B1551] Length = 556 Score = 609 bits (1571), Expect = e-172, Method: Composition-based stats. Identities = 211/587 (35%), Positives = 335/587 (57%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + +LK +++ K + EK L +++E P+D HG STN AM L+R Sbjct: 1 MNIVEQVQQKLKAEIQDAVVKAGLAEKAELPEVLLETPKDKTHGDYSTNMAMQLARIAKK 60 Query: 60 DPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA ++ + IAG GFIN Y++ SYL +++ +IV +G YG+ +G Sbjct: 61 APRVIAEELVANFDKSQASIEKIDIAGPGFINFYMNNSYLAELIPTIVKAGEAYGQTNVG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G KV +EFVSANPTG +H+GH R A VGD+L +++ +GY+V+REYYINDAG QIN LA Sbjct: 121 NGQKVQVEFVSANPTGDLHLGHARGAAVGDSLCNVLEKAGYDVSREYYINDAGNQINNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 SV RY QAL + ++P Y G + ++GKELA ++ + N EE+ + Y + Sbjct: 181 YSVEARYMQAL-GLEKEMPADGYHGADIINIGKELAKEHGDKYANASEEERFEFFRQYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + ++ DL+ ++ D++ SE ++ D I ++ L +QG+VYE Sbjct: 240 DYELAKLKRDLEQFRVKFDVWYSETSLYKND--KISIALETLKKQGHVYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRST GDD DR L+K+DGS+TY D+AY + K +RGFD +I + G+ Sbjct: 288 ------EEGATWFRSTTFGDDKDRVLIKNDGSFTYLTPDIAYHQDKIQRGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ +K + V + ++V+LY++G +KMSKR G +T+R +V+EVG Sbjct: 342 DHHGYIPRMKAAIQALGYEKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTMRDLVEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ R LDFD QS ENPV+Y QYA+AR SI RQ +++ Sbjct: 402 LDATRYFFAMRSADTHLDFDLDLAVSQSNENPVYYAQYAHARICSILRQGEEMG------ 455 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + E++L+ + E+P+ + A + P+++ Y++DLAS FH ++ Sbjct: 456 IQSTSGADLSLISAEKEMELLKKIGEFPQAVAEAATKRIPHRITNYVFDLASTFHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + ++N + + R++LV AV + + L +IGV +P +M Sbjct: 516 E------KVLDSDNVETSKARIELVKAVQVTLQNSLKLIGVSAPEKM 556 >gi|89101282|ref|ZP_01174100.1| arginyl-tRNA synthetase [Bacillus sp. NRRL B-14911] gi|89084002|gb|EAR63185.1| arginyl-tRNA synthetase [Bacillus sp. NRRL B-14911] Length = 556 Score = 609 bits (1571), Expect = e-172, Method: Composition-based stats. Identities = 217/587 (36%), Positives = 336/587 (57%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVE-KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + S LK +K+ K + ++ + +++E P++ AHG STN AM L+R Sbjct: 1 MNIVEQVQSNLKEEIKQAVIKAGLAAEEQIPDVILETPKEKAHGDYSTNMAMQLARIAKK 60 Query: 60 DPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE ++ ++ + IAG GFIN Y++ SYL ++ +++ +G +YG G Sbjct: 61 APRMIAEQLIENFDSSKASIEKIEIAGPGFINFYMNNSYLTNLIPTVLDAGAQYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G KV IEFVSANPTG +H+GH R A VGD+L+S++A +GY+V+REYYINDAG QIN LA Sbjct: 121 NGQKVQIEFVSANPTGDLHLGHARGAAVGDSLSSILAKAGYDVSREYYINDAGNQINNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL + ++P Y G + +G+ LAD++ + +N E++ ++Y + Sbjct: 181 LSVEARYFQAL-GMEKEMPADGYHGADIIGIGQRLADEFGDKYVNADEKERFDAFREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + M+ ++ DL+ + D++ SE ++ I D + L G+VYE Sbjct: 240 KYEMEKLKKDLEDFRVPFDVWYSETSLYQN--GKIDDALKALKENGHVYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRST GDD DR L+K+DGSYTY D+AY K K ERGF+ +I V G+ Sbjct: 288 ------EEGATWFRSTEFGDDKDRVLIKNDGSYTYLTPDIAYHKDKLERGFEKLINVWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + +LV LY++G +KMSKR G +T+R +VDEVG Sbjct: 342 DHHGYIPRMKAAIQALGYGKDALEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLVDEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+VR+ R +DFD QS +NPV+Y QYA+AR SI RQ ++ L D Sbjct: 402 LDAVRYFFAMRSADTHMDFDLDLAVSQSNDNPVYYAQYAHARISSILRQGEEQGMALSAD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 ++I E E+ L+ L E+P+ + A + P+++ Y+++LAS FH ++ Sbjct: 462 -ADFSLISAE-----KEIDLLKKLGEFPQAVAEAAEKRMPHRITNYIFELASAFHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + ++N + T RL L+ AV + + + L +IGV +P +M Sbjct: 516 E------KVLDSDNPEKTKARLGLIKAVQTALRNALKLIGVSAPEKM 556 >gi|323137650|ref|ZP_08072726.1| arginyl-tRNA synthetase [Methylocystis sp. ATCC 49242] gi|322396947|gb|EFX99472.1| arginyl-tRNA synthetase [Methylocystis sp. ATCC 49242] Length = 593 Score = 609 bits (1571), Expect = e-172, Method: Composition-based stats. Identities = 302/594 (50%), Positives = 399/594 (67%), Gaps = 11/594 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL- 59 M +F F +R+ + L+ I ++ + L R V+E P+D + G L+ NAAM+ +R Sbjct: 1 MNIFDIFHARIASILEGIKADGRLPEPDLARFVVEPPKDASLGDLACNAAMVFAREAKAH 60 Query: 60 --DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117 +P +A I + V + +AG GFIN+ L P ++L + ++ YGR Sbjct: 61 FANPRELAVEICYALAQSEGVATAEVAGPGFINIRLKPEIFAQVLRAALLDPDNYGRVEK 120 Query: 118 GK----GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173 G+ KVN+E+VSANPTGPMHVGH R AV GD LA+L+AFSG EVTREYYINDAGAQ Sbjct: 121 GRAGALQGKVNVEYVSANPTGPMHVGHGRGAVFGDALANLLAFSGCEVTREYYINDAGAQ 180 Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233 ++ LA S F RY++AL +PEG YPG YLK VG+ LA + ELL+ PE +WLP+V Sbjct: 181 VDVLARSAFLRYREAL-GETITIPEGLYPGDYLKPVGEALAKAHGRELLDRPEGEWLPVV 239 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR--GDPSPIRDIIDNLARQGYVYEGIL 291 + ++ AMM +IRDDL ALNI+H+IF SE H PS I I+ L +G VYEG L Sbjct: 240 RREAIDAMMDMIRDDLAALNIRHEIFFSERTLHDRSNGPSKIDAAIEWLREKGLVYEGRL 299 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351 PPPK + + DR+Q LFRST GDDVDR L KSDGS TYFA+D+AY K K +RGFD Sbjct: 300 PPPKGQLPDDWE-DREQTLFRSTDFGDDVDRALKKSDGSPTYFASDIAYHKDKIDRGFDT 358 Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 ++ V G+DH GYVKR+ A AA+S +K ++V LC+LV+L R+G P+KMSKRAGDF+TLR Sbjct: 359 LVDVWGADHGGYVKRMGAAVAALSGRKVALDVKLCQLVKLMRNGEPVKMSKRAGDFVTLR 418 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 VVDEVG D+VRFMML+RKN LDFD KV EQSK+N VFYVQYA+AR +S+ RQA Sbjct: 419 EVVDEVGVDAVRFMMLYRKNDAPLDFDLAKVIEQSKDNAVFYVQYAHARAKSVMRQALAA 478 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 FPDLD + + E D ELQL +A+YPR IE A A EP+++AFYL++L+SV Sbjct: 479 FPDLDISMAALSGAKFEMLTDEGELQLARVIAQYPRAIEAAAAAHEPHRVAFYLHELSSV 538 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 FH HW+ G++ P+LRFV + R LT R+ LV ++ ++ SGL ++GV +P+EM Sbjct: 539 FHSHWNKGKDQPQLRFVNSTERDLTSARVALVLSLTVVLGSGLRLLGVSAPDEM 592 >gi|56421936|ref|YP_149254.1| arginyl-tRNA synthetase [Geobacillus kaustophilus HTA426] gi|261420805|ref|YP_003254487.1| arginyl-tRNA synthetase [Geobacillus sp. Y412MC61] gi|297531600|ref|YP_003672875.1| arginyl-tRNA synthetase [Geobacillus sp. C56-T3] gi|319768475|ref|YP_004133976.1| arginyl-tRNA synthetase [Geobacillus sp. Y412MC52] gi|81346254|sp|Q5KUF0|SYR_GEOKA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|56381778|dbj|BAD77686.1| arginyl-tRNA synthetase [Geobacillus kaustophilus HTA426] gi|261377262|gb|ACX80005.1| arginyl-tRNA synthetase [Geobacillus sp. Y412MC61] gi|297254852|gb|ADI28298.1| arginyl-tRNA synthetase [Geobacillus sp. C56-T3] gi|317113341|gb|ADU95833.1| arginyl-tRNA synthetase [Geobacillus sp. Y412MC52] Length = 557 Score = 609 bits (1570), Expect = e-172, Method: Composition-based stats. Identities = 218/587 (37%), Positives = 329/587 (56%), Gaps = 32/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + ++K +++ + + L +++E PRD AHG STN AM L+R Sbjct: 1 MNIVGQIKEKMKEEIRQAAVRAGLASADELPDVLLEVPRDKAHGDYSTNIAMQLARIAKK 60 Query: 60 DPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IV ++ + V + IAG GFIN Y+ YL ++ +I+ +G YG + +G Sbjct: 61 PPRAIAEAIVGQLDRERMSVARIEIAGPGFINFYMDNRYLTAVVPAILQAGQAYGESNVG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G KV +EFVSANPTG +H+GH R A VGD+L +++A +G++VTREYYINDAG QI LA Sbjct: 121 NGEKVQVEFVSANPTGDLHLGHARGAAVGDSLCNILAKAGFDVTREYYINDAGKQIYNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 SV RY QAL D LPE Y G + +GK+LA++Y + EE+ L +DY + Sbjct: 181 KSVEARYFQAL-GVDMPLPEDGYYGDDIVEIGKKLAEEYGDRFVEMEEEERLAFFRDYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + ++ I+ DL + D++ SE + + I + + L +GY+YE Sbjct: 240 RYELEKIKKDLADFRVPFDVWYSETSLY--ESGKIDEALSTLRERGYIYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 FRST GDD DR L+K DG+YTY D+AY + K RGF +I + G+ Sbjct: 288 ------QDGATWFRSTAFGDDKDRVLIKQDGTYTYLLPDIAYHQDKLRRGFKKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A AA+ + V + ++V LY++G +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMKAAIAALGYDPEALEVEIIQMVNLYQNGERVKMSKRTGKAVTMRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+VR+ R LDFD QS ENPV+YVQYA+AR SI RQA++ D D Sbjct: 402 VDAVRYFFAMRSGDTHLDFDMDLAVSQSNENPVYYVQYAHARVSSILRQAEEQHISYDGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L +++ E E++L+ L ++P V+ A + + P+++ Y +DLAS H ++ Sbjct: 462 LALHHLVETE-----KEIELLKVLGDFPDVVAEAALKRMPHRVTAYAFDLASALHSFYNA 516 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N + T RL LV AV + + L +IGV +P +M Sbjct: 517 E------KVLDLDNIEKTKARLALVKAVQITLQNALALIGVSAPEQM 557 >gi|16080786|ref|NP_391614.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|221311696|ref|ZP_03593543.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|221316022|ref|ZP_03597827.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320933|ref|ZP_03602227.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. JH642] gi|221325218|ref|ZP_03606512.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SMY] gi|2851477|sp|P46906|SYR_BACSU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|2224756|emb|CAB09703.1| arginyl tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|2636270|emb|CAB15761.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168] gi|291486320|dbj|BAI87395.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195] Length = 556 Score = 608 bits (1568), Expect = e-172, Method: Composition-based stats. Identities = 213/587 (36%), Positives = 323/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + LK +K K + E+ + +V+E P+D HG STN AM L+R Sbjct: 1 MNIAEQMKDVLKEEIKAAVLKAGLAEESQIPNVVLETPKDKTHGDYSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IVA K ++ + IAG GFIN Y++ YL K++ S++ +G YG IG Sbjct: 61 APRQIAEEIVAHFDKGKASIEKLDIAGPGFINFYMNNQYLTKLIPSVLEAGEAYGETNIG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G +V +EFVSANPTG +H+GH R A VGD+L ++++ +GY+V+REYYINDAG QIN LA Sbjct: 121 NGERVQVEFVSANPTGDLHLGHARGAAVGDSLCNVLSKAGYDVSREYYINDAGNQINNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY +AL + +PE Y G + +GK LA++Y +N E + L ++Y + Sbjct: 181 LSVEVRYFEAL-GLEKPMPEDGYRGEDIIAIGKRLAEEYGDRFVNEEESERLAFFREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + ++ +R DL+ + D++ SE ++ I ++ L +G+VYE Sbjct: 240 KYELEKLRKDLENFRVPFDVWYSETSLYQN--GKIDKALEALREKGHVYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRST GDD DR L+K DG+YTY D+AY K K +RGFD +I V G+ Sbjct: 288 ------EDGATWFRSTTFGDDKDRVLIKKDGTYTYLLPDIAYHKDKLDRGFDKLINVWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ +K + V + +LV LY++G +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMKAAIEALGYEKGTLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+VR+ R +DFD S ENPV+Y QYA+AR S+ RQ ++ Sbjct: 402 LDAVRYFFAMRSADTHMDFDLDLAVSTSNENPVYYAQYAHARICSMLRQGEEQG------ 455 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L P + E L+ + +P + A + P+++ Y+YDLAS H ++ Sbjct: 456 LKPAADLDFSHIQSEKEYDLLKTIGGFPEAVAEAAEKRIPHRVTNYIYDLASALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + N + + RL L+ A +N+ L +IGV +P +M Sbjct: 516 E------KVIDPENEEKSRARLALMKATQITLNNALQLIGVSAPEKM 556 >gi|229542451|ref|ZP_04431511.1| arginyl-tRNA synthetase [Bacillus coagulans 36D1] gi|229326871|gb|EEN92546.1| arginyl-tRNA synthetase [Bacillus coagulans 36D1] Length = 558 Score = 608 bits (1567), Expect = e-171, Method: Composition-based stats. Identities = 218/588 (37%), Positives = 330/588 (56%), Gaps = 33/588 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + LK +KE K + + + IV+E+P++ AHG + N AM L+R Sbjct: 1 MNIAEQMQETLKTEIKEAVMKTGLVAEADIPAIVLEKPKEKAHGDYAANIAMQLARTAKK 60 Query: 60 DPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IV I ++ V IAG GFIN YL +YL +++ SI+ G +YGR+ G Sbjct: 61 APRQIAEAIVEHIDKSKTSIEKVEIAGPGFINFYLDNTYLTRLIPSILHDGADYGRSDAG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G K+ +EFVSANPTG +H+GH R A VGD+L +++ +GYEVTREYYINDAG QI+ LA Sbjct: 121 GGKKIQVEFVSANPTGDLHLGHARGAAVGDSLCNILEKAGYEVTREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL + ++P Y G + +GK+LAD+Y + ++ E+ + Y + Sbjct: 181 LSVEARYFQAL-GIEKEMPADGYYGQDIIDLGKKLADEYGRKFVDTDEKTRYEFFRQYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 M ++ DL+ ++ D++ SE ++ I +++ + +G++YE Sbjct: 240 DYEMAKLKKDLEDFRVRFDVWYSETSLYK--SGKIDEMLKLMREKGHIYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 FRST GDD DR L+K+DG+YTY D+AY K K++RGFD +I + G+ Sbjct: 288 ------KDGATWFRSTAFGDDKDRVLIKNDGTYTYLTPDIAYHKDKFDRGFDTLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ + V + +LV LY++G +KMSKR G +T+R ++DEVG Sbjct: 342 DHHGYIPRMKAAMEALGYNSDNLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRELIDEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ R + LDFD +S ENPV+Y QYA+AR SI RQA + D D Sbjct: 402 LDATRYFFAMRSSDTHLDFDLDLAVSESNENPVYYAQYAHARICSILRQAVEKGFAPDTD 461 Query: 479 L-FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 +VI E E D ++ L E+P+VI A + P+++ Y+ +LA+ FH ++ Sbjct: 462 AHADFSVIRSEKETD-----VLKKLGEFPQVIAEAAEKRIPHRITNYINELAANFHSFYN 516 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + + T RL LV AV + + L +IGV +P +M Sbjct: 517 A------VKVIDPAHADATKARLALVKAVQITLKNALQLIGVSAPEKM 558 >gi|321313283|ref|YP_004205570.1| arginyl-tRNA synthetase [Bacillus subtilis BSn5] gi|320019557|gb|ADV94543.1| arginyl-tRNA synthetase [Bacillus subtilis BSn5] Length = 556 Score = 607 bits (1566), Expect = e-171, Method: Composition-based stats. Identities = 213/587 (36%), Positives = 322/587 (54%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + LK +K K + E+ + +V+E P+D HG STN AM L+R Sbjct: 1 MNIAEQMKDVLKEEIKAAVLKAGLAEESQIPNVVLETPKDKTHGDYSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IVA K ++ + IAG GFIN Y++ YL K++ S++ +G YG IG Sbjct: 61 APRQIAEEIVAHFDKGKASIEKLDIAGPGFINFYMNNQYLTKLIPSVLEAGEAYGETNIG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G +V +EFVSANPTG +H+GH R A VGD+L ++++ +GY+V+REYYINDAG QIN LA Sbjct: 121 NGERVQVEFVSANPTGDLHLGHARGAAVGDSLCNVLSKAGYDVSREYYINDAGNQINNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY +AL + +PE Y G + +GK LA++Y +N E + L ++Y + Sbjct: 181 LSVEVRYFEAL-GLEKPMPEDGYRGEDIIAIGKRLAEEYGDRFVNEEESERLAFFREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + +R DL+ + D++ SE ++ I ++ L +G+VYE Sbjct: 240 KYELDKLRKDLENFRVPFDVWYSETSLYQN--GKIDTALEALREKGHVYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRST GDD DR L+K DG+YTY D+AY K K +RGFD +I V G+ Sbjct: 288 ------EDGATWFRSTTFGDDKDRVLIKKDGTYTYLLPDIAYHKDKLDRGFDKLINVWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ +K + V + +LV LY++G +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMKAAIEALGYEKGTLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+VR+ R +DFD S ENPV+Y QYA+AR S+ RQ ++ Sbjct: 402 LDAVRYFFAMRSADTHMDFDLDLAVSTSNENPVYYAQYAHARICSMLRQGEEQG------ 455 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L P + E L+ + +P + A + P+++ Y+YDLAS H ++ Sbjct: 456 LKPAADLDFSHIQSEKEYDLLKTIGGFPEAVAEAAEKRIPHRVTNYIYDLASALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + N + + RL L+ A +N+ L +IGV +P +M Sbjct: 516 E------KVIDPENEEKSRARLALMKATQITLNNALQLIGVSAPEKM 556 >gi|126734650|ref|ZP_01750396.1| arginyl-tRNA synthetase [Roseobacter sp. CCS2] gi|126715205|gb|EBA12070.1| arginyl-tRNA synthetase [Roseobacter sp. CCS2] Length = 579 Score = 607 bits (1566), Expect = e-171, Method: Composition-based stats. Identities = 262/586 (44%), Positives = 374/586 (63%), Gaps = 9/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFAD +R+ + L ++ + + + + +E PRD +HG ++TNAAM+L++P + Sbjct: 1 MNLFADMRARVLDCLDQMVAEGTLPADLATAAVSVEPPRDASHGDMATNAAMVLAKPAKM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P IA+ + A++ DP + V +AG GF+N+ L P + ++ + + YG++ +G+ Sbjct: 61 NPRVIADALAAKLLADPQIAVVEVAGPGFLNMRLVPEVWQGVVKAALSD-PAYGQSNLGQ 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G K+ +E+VSANPTGP+HVGH R AV GD LA L+ ++G++VT+EYYIND GAQ++ LA Sbjct: 120 GQKMMVEYVSANPTGPLHVGHTRGAVFGDALARLLDYAGFDVTKEYYINDGGAQVDVLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + + P+G YPG YLK VGK L K ++ E+ WL +++++ + Sbjct: 180 SVYLRYLEA-HGQEVAFPDGTYPGDYLKPVGKALKAKVGDAYVDKGEQYWLEEIREFATE 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL L + D F SE + I I L +G +Y G L PPK K Sbjct: 239 AMMDLIRADLAQLGVVMDNFYSEKSLY--GTGLIEKAIAELDEKGLIYRGTLEPPKGKMP 296 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP+ KSDGS+TYFA D+AY K +RGFD +I V G+D Sbjct: 297 EDWE-PREQTLFKSTAHGDDVDRPVQKSDGSWTYFAPDIAYHYDKVQRGFDQLIDVFGAD 355 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ K ++V L +LV+LY++G P KMSKRAG F+TLR VVD+VG+ Sbjct: 356 HGGYVKRMKAAVSALSDGKVPLDVKLTQLVKLYKNGEPFKMSKRAGTFVTLRDVVDQVGA 415 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 + RF ML RKN LDFDF KV EQSK+NPVFYV YAYAR S +A D L Sbjct: 416 NVTRFHMLTRKNDAPLDFDFDKVLEQSKDNPVFYVNYAYARVNSAVGKAGAFTDVSDVTL 475 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 ++ E +EL +I LAE+PR++E A EP+++AFYLYDLAS FH + G Sbjct: 476 ADVDLSGLTHE---AELAVIRKLAEWPRLVEIAARGHEPHRIAFYLYDLASDFHALYHQG 532 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + LRFVQ + + T ++ L+ AVA +I GL I+GV EM Sbjct: 533 NADEALRFVQEGDSETTQAKIALIRAVAIVILHGLGILGVTPAEEM 578 >gi|254454733|ref|ZP_05068170.1| arginyl-tRNA synthetase [Octadecabacter antarcticus 238] gi|198269139|gb|EDY93409.1| arginyl-tRNA synthetase [Octadecabacter antarcticus 238] Length = 578 Score = 606 bits (1564), Expect = e-171, Method: Composition-based stats. Identities = 258/586 (44%), Positives = 369/586 (62%), Gaps = 10/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFAD + + + L + + + + + +E PRD +HG ++TNA M+L++P G+ Sbjct: 1 MNLFADIRATVIDCLDALTIEGVLPAGLDFANVTVEPPRDASHGDMATNAVMVLAKPSGM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ + A++ D + S IAG GF+NL L ++S+++ ++G++ +G Sbjct: 61 KPRDIADALAAKLVADTRITSADIAGPGFLNLALDAGVWAGVVSAVLTD-ADFGKSNLGA 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G K+N+E++SANPTGP+HVGH R AV GD LASL+A++GY+VTREYYIND GAQ++ LA Sbjct: 120 GKKMNVEYISANPTGPLHVGHTRGAVFGDALASLLAYAGYDVTREYYINDGGAQVDVLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + +G YPG YL G++L + + EE WL V+++ Sbjct: 180 SVYLRYLEA-HGQAVTFEDGTYPGEYLIQAGQDLKARVGDAYVGQGEEVWLDDVREFGTD 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL +L ++ D+F SE + I I +L +G +Y+G L PPK K Sbjct: 239 AMMALIREDLDSLGVKMDVFYSEKSLY--GTGLIEAAIADLKTKGLIYKGTLEPPKGKLP 296 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP+ KSDG++TYFA D+AY K RGFD +I V G+D Sbjct: 297 EDWE-PREQTLFKSTEFGDDVDRPIQKSDGAWTYFAPDIAYHYDKISRGFDALIDVFGAD 355 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A AA+S+ ++V L +LV+LY+ G P KMSKRAG FI LR +V EVG Sbjct: 356 HGGYVKRMKAAVAALSDNAVPLDVKLTQLVKLYKKGEPFKMSKRAGTFIMLRDLVAEVGP 415 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF ML RKN LDFDF KV EQSK+NPVFYVQYA AR S+ R+A + D+ Sbjct: 416 DVTRFHMLTRKNDAPLDFDFDKVTEQSKDNPVFYVQYASARIHSVMRKAVEAG----VDV 471 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 +EL + LAE+PR++E A EP+++AFYLYDLAS HG W+ G Sbjct: 472 SDLAHADLSLATHPAELAMAAKLAEWPRLVEIAAKGHEPHRIAFYLYDLASELHGLWNRG 531 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ LRF+Q +N T ++ L+ +V+ +I+ GL I+GV EM Sbjct: 532 SDDASLRFLQVDNIPATQAKIALIKSVSVVISHGLGILGVTPAEEM 577 >gi|288554437|ref|YP_003426372.1| arginyl-tRNA synthetase [Bacillus pseudofirmus OF4] gi|288545597|gb|ADC49480.1| arginyl-tRNA synthetase [Bacillus pseudofirmus OF4] Length = 556 Score = 606 bits (1562), Expect = e-171, Method: Composition-based stats. Identities = 208/587 (35%), Positives = 327/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +LK +K + + +L +V+E P+D AHG +TN AM L+R Sbjct: 1 MNSVEQMKQKLKEEIKAAVISAGLATEDVLPEVVLEAPKDKAHGDYATNMAMQLARIAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE + +++ K + + IAG GFIN +++ SYLR+I+ +++ + YG +G Sbjct: 61 APRQIAEELTSQLDKEKASIQKIDIAGPGFINFFMNKSYLREIVPAVLSAKEAYGETNVG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G K+ +EFVSANPTG +H+GH R A VGD L ++++ +GY+V REYYINDAG QIN LA Sbjct: 121 NGEKIQVEFVSANPTGSLHLGHARGAAVGDALCNVLSKAGYDVEREYYINDAGNQINNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LS+ RY QAL D ++PE Y G + GK LA+++ + +N E + + Y + Sbjct: 181 LSLEARYFQAL-GQDKEMPEEGYRGQDIVDFGKALAEEHGDKYVNVSESERREFFRQYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 Q + I+ DLK ++ D + SE + + + + ++++ L +G YE Sbjct: 240 QKELDKIKSDLKEFRVEFDNWFSETSLY--ESNKVIEVLETLDEKGETYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 FRST GDD DR L+K+DG+YTY D+AY + K +RGFD +I + G+ Sbjct: 288 ------QDGATWFRSTTYGDDKDRVLIKNDGTYTYLTPDIAYHQDKMQRGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R+ A A+ Q V + ++V LY+ G +KMSKR G +TLR ++DEVG Sbjct: 342 DHHGYIPRMRAAIQALGYSPEQFEVQIIQMVSLYQGGEKVKMSKRTGKAVTLRDLMDEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+VR+ R LDFD +S ENPVFYVQYA+AR S+ RQ +++ D D + Sbjct: 402 IDAVRYFFAMRSADSQLDFDMDLAVSKSNENPVFYVQYAHARVCSMLRQGEELGLDYDEN 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + E E+D L+ + ++P ++ A + P+++ Y +DLAS H ++ Sbjct: 462 T-DLSAVSTEKEYD-----LLKAIGDFPAIVAEAAEKKMPHRITNYAHDLASALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R + + ++ + RL L+ A I + L+++GV +P +M Sbjct: 516 ER------VIDSEDQDKSKARLALMKATQITIQNALSLVGVSAPEKM 556 >gi|138896975|ref|YP_001127428.1| arginyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2] gi|196249795|ref|ZP_03148491.1| arginyl-tRNA synthetase [Geobacillus sp. G11MC16] gi|166232790|sp|A4ITM9|SYR_GEOTN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|134268488|gb|ABO68683.1| Arginyl tRNA synthetase [Geobacillus thermodenitrificans NG80-2] gi|196210671|gb|EDY05434.1| arginyl-tRNA synthetase [Geobacillus sp. G11MC16] Length = 557 Score = 606 bits (1562), Expect = e-171, Method: Composition-based stats. Identities = 219/587 (37%), Positives = 332/587 (56%), Gaps = 32/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + +LK +++ K + + L +++E PR+ AHG STN AM L+R Sbjct: 1 MNIVGQMKEQLKEEIRQAVGKAGLVAAEELPEVLLEVPREKAHGDYSTNIAMQLARIAKK 60 Query: 60 DPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IV + + V + +AG GFIN Y+ YL ++ +I+ +G YG + +G Sbjct: 61 PPRAIAEAIVEKFDAERVSVARIEVAGPGFINFYMDNRYLTAVVPAILQAGQAYGESNVG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV +EFVSANPTG +H+GH R A VGD+L++++A +G++VTREYYINDAG QI LA Sbjct: 121 KGEKVQVEFVSANPTGNLHLGHARGAAVGDSLSNILAKAGFDVTREYYINDAGKQIYNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 SV RY QAL D LPE Y G + +GK+LAD+Y ++ EE+ L ++Y + Sbjct: 181 KSVEARYFQAL-GTDMPLPEDGYYGDDIVEIGKKLADEYGDRFVHVDEEERLAFFREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + I++DL A + D++ SE + + I + + L +GY+YE Sbjct: 240 RYELDKIKNDLAAFRVPFDVWYSETSLY--ESGKIDEALSTLRERGYIYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 FRST GDD DR L+K DG+YTY D+AY + K RGF +I V G+ Sbjct: 288 ------QDGATWFRSTAFGDDKDRVLIKQDGTYTYLLPDIAYHQDKLRRGFTKLINVWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A AA+ + V + ++V LY++G +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMKAAIAALGYDPEALEVEIIQMVNLYQNGERVKMSKRTGKAVTMRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+VR+ R LDFD QS ENPV+YVQYA+AR SI RQAK+ + D Sbjct: 402 VDAVRYFFAMRSGDTHLDFDMDLAVAQSNENPVYYVQYAHARVSSILRQAKEHQLSYEGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + +++ E E++L+ L ++P V+ A + + P+++ Y +DLAS H ++ Sbjct: 462 VDLHHLVETE-----KEIELLKALGDFPDVVAEAALKRMPHRVTAYAFDLASALHSFYNA 516 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + + T RL LV AV + + L +IGV +P +M Sbjct: 517 E------KVLDLDQIEKTKARLALVKAVQITLQNALALIGVSAPEQM 557 >gi|148556836|ref|YP_001264418.1| arginyl-tRNA synthetase [Sphingomonas wittichii RW1] gi|148502026|gb|ABQ70280.1| arginyl-tRNA synthetase [Sphingomonas wittichii RW1] Length = 576 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 267/584 (45%), Positives = 373/584 (63%), Gaps = 13/584 (2%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 L+A F+ R+ L ++ + + R + +E PRD AHG L+TNAAM+L++P G +P Sbjct: 4 LYASFADRIGAILDDLQASGALPAGLDRRNVAVEPPRDPAHGDLATNAAMVLAKPAGTNP 63 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +AELIV ++ P++ S +AG GFIN+ L+ R L+ I+ SG +YGR G+GT Sbjct: 64 RALAELIVPKLAALPEIASAEVAGPGFINVRLTEQSWRDELAGILSSGGDYGRTATGRGT 123 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 +VN+E+VSANPTGPMH+GHCR AVVGD LA+L+ F+GY VTREYY+NDAGAQ+ TLA S Sbjct: 124 RVNVEYVSANPTGPMHMGHCRGAVVGDALAALLEFAGYAVTREYYVNDAGAQVQTLARSA 183 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 RY++AL ++PEG+YPG YL +G+ LA ++ + PE WL + ++ +V AM Sbjct: 184 HLRYREAL-GETIEIPEGFYPGDYLIPIGQALAAEFGDAYVGKPESAWLDLFREKTVAAM 242 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 M +IR DL L I+H++F SE + + +D L +G VYEG L PPK + Sbjct: 243 MDMIRADLALLGIEHEVFASEAAVQK--AGKVDVALDRLRGEGLVYEGTLEPPKGELPDD 300 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 + + LF++T GDD DRP+ KSDG TYF DLAY K E D +I + G+DH+ Sbjct: 301 WE-PTEMTLFKATAFGDDSDRPVRKSDGGLTYFGTDLAYHAQKAET-ADMLIDIWGADHA 358 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 G VKR++A A++ K +V L ++VRL R G P+KMSKR+G F+TL VV EVG D Sbjct: 359 GTVKRIKAAVQALTGGKVAFDVKLVQMVRLLRGGEPVKMSKRSGSFVTLADVVREVGKDV 418 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 VRF ML RK +DFDF KV E SK+NPVFYVQYA+AR RS+ R+A + DL Sbjct: 419 VRFTMLTRKADAQMDFDFAKVVEASKDNPVFYVQYAHARGRSLHRRAAEAGIDL------ 472 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 S D EL L+ A++PR++E A A EP+++AFYLYDLA++FH W+ G + Sbjct: 473 -APAADLSLLDAEELALVKLAAQFPRIVEGAAQAHEPHRIAFYLYDLAAMFHALWNRGND 531 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +P RF+ ++ ++T RL L A+ II +GL ++GV + EM Sbjct: 532 DPARRFLLSDKPEITRARLALSDAIGQIIRNGLGVMGVTAAEEM 575 >gi|89053998|ref|YP_509449.1| arginyl-tRNA synthetase [Jannaschia sp. CCS1] gi|109894997|sp|Q28S88|SYR_JANSC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|88863547|gb|ABD54424.1| arginyl-tRNA synthetase [Jannaschia sp. CCS1] Length = 575 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 265/586 (45%), Positives = 374/586 (63%), Gaps = 12/586 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFA+ + + + + + + + +E PRD +HG ++TNAAM+L++P G+ Sbjct: 1 MTLFAEIRDTVLAAIDTLVADNVLPSGLEMRAVTVEPPRDASHGDMATNAAMVLAKPAGM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + A++ D +D+V +AG GF+NL LS R +++ + G YGR+ IG Sbjct: 61 KPRDIAEALAAKLADDARIDTVDVAGPGFLNLRLSGDVWRGVIADALTQGEAYGRSKIGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGP+HVGH R AV GD LASL+ +GY+VTREYYIND GAQ++ L Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDVAGYDVTREYYINDGGAQVDVLVR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + D +G YPG YL VG+ L DK ++ E+ WL +++++ + Sbjct: 181 SVYLRYLEA-HGQDVAFEDGTYPGDYLIDVGQALKDKVGDAFVDKGEQFWLAEIREFATE 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM +IR DL L ++ D+F SE + I ID+L +G +YEG L PPK KT Sbjct: 240 QMMDLIRKDLALLGVEMDVFYSEKSLY--GTGRIEAAIDDLRGKGLIYEGYLEPPKGKTP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP++KSDGS+TYFA D+AY K RGFD +I V G+D Sbjct: 298 EDWE-PREQTLFKSTEHGDDVDRPVMKSDGSWTYFAPDIAYHFDKVSRGFDELIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S ++V L +LV+L R +KMSKRAG F+TL VV+ VG+ Sbjct: 357 HGGYVKRMKAAVSALSGGDVPLDVKLTQLVKLRRGDEELKMSKRAGTFVTLADVVEMVGA 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF ML RKN LDFD KV+EQSK+NPV+YVQYA+AR +S+ R+A++ D Sbjct: 417 DVTRFHMLTRKNDAPLDFDVDKVREQSKDNPVWYVQYAHARIKSVLRKAEEAGMSPDPAN 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + D +EL L +AEYPR+IE A EP+++AFYL+DLAS FHG W+ G Sbjct: 477 LN-------AVNDPAELALAAKIAEYPRLIEIAAKGNEPHRVAFYLFDLASDFHGLWNKG 529 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LRF Q ++ T +L L+ AVA +I++GL I+GV ++M Sbjct: 530 NAETHLRFFQDDDPSATSGKLCLISAVAIVISNGLGILGVTPVDQM 575 >gi|89068216|ref|ZP_01155626.1| arginyl-tRNA synthetase [Oceanicola granulosus HTCC2516] gi|89046133|gb|EAR52191.1| arginyl-tRNA synthetase [Oceanicola granulosus HTCC2516] Length = 580 Score = 605 bits (1560), Expect = e-171, Method: Composition-based stats. Identities = 261/586 (44%), Positives = 373/586 (63%), Gaps = 8/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFAD + + + L + + + + +E PRD AHG ++TNAAM+L++P G+ Sbjct: 1 MNLFADIRALVVDRLAALAADGTIPDGLDTANVAVEPPRDPAHGDMATNAAMVLAKPAGM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ + AR+ DP + +AG GF+N+ L+ + ++ ++ YGR+ +G Sbjct: 61 KPRDIADALAARLADDPRIALAEVAGPGFLNIRLADGVWQDLVRQVLRDD-SYGRSDMGA 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+EFVS NPTGPMH+GH R A GD LASL+ ++G+EVTREYYIND GAQ++ LA Sbjct: 120 GEKVNVEFVSVNPTGPMHLGHVRNAAFGDALASLLDYAGHEVTREYYINDGGAQVDVLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + + +G YPG YL VG+ L + ++ E+ WL V+++S Sbjct: 180 SVYLRYLEA-HGREVRFEDGTYPGDYLVAVGEALKAEVGDAYVDQNEDVWLKHVREFSTD 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM++I+DDL AL + D + SE + I I++L +G +Y+G L PPK K Sbjct: 239 RMMQVIKDDLAALGVVMDNYFSEKSLY--GTGKIEGAIESLRDKGLIYKGTLEPPKGKVP 296 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LFRST GDDVDRP++KSDG++TYFA D+AY K ERGF +I V+G+D Sbjct: 297 EDWE-PREQTLFRSTAHGDDVDRPIMKSDGTWTYFAPDIAYHHDKLERGFTQLIDVLGAD 355 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ + ++V L +LV+LY++G P KMSKRAG F+TL VVD VG Sbjct: 356 HGGYVKRMKAAVSAMSDGQVPLDVKLIQLVKLYKNGEPFKMSKRAGTFVTLADVVDMVGP 415 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF ML RKN LDFDF KV EQSK+NPVFYVQYA+AR +S+ R+A + +D + Sbjct: 416 DVTRFHMLTRKNDAPLDFDFDKVTEQSKDNPVFYVQYAHARVQSVLRKAAEEG--IDTET 473 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + SEL L LAE+PR++E A EP+++AFYLY+LAS H W+ G Sbjct: 474 ATLAEVDLSGLTHESELALAKKLAEWPRLVEIAARTHEPHRVAFYLYELASELHALWNKG 533 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 E+ LRF+Q + T ++ L A A +I++GL I+GV +EM Sbjct: 534 NEDHSLRFLQEGDAAATQAKIALPRAAAIVISAGLGILGVTPVDEM 579 >gi|296331374|ref|ZP_06873846.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676361|ref|YP_003868033.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str. W23] gi|296151489|gb|EFG92366.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414605|gb|ADM39724.1| arginyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str. W23] Length = 556 Score = 604 bits (1559), Expect = e-170, Method: Composition-based stats. Identities = 209/587 (35%), Positives = 323/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + LK +K K + E+ + +V+E P+D HG STN AM L+R Sbjct: 1 MNIAEQMKDVLKEEIKSAVLKAGLAEESQIPNVVLETPKDKTHGDYSTNMAMQLARIAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +V+ K ++ + IAG GFIN Y++ YL K++ S++ +G YG IG Sbjct: 61 APRQIAEELVSHFDKGKASIEKLDIAGPGFINFYMNNQYLTKLIPSVLEAGEAYGETNIG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G +V +EFVSANPTG +H+GH R A VGD+L ++++ +GY+V+REYYINDAG QIN LA Sbjct: 121 NGERVQVEFVSANPTGDLHLGHARGAAVGDSLCNVLSKAGYDVSREYYINDAGNQINNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY +AL + +PE Y G + +GK +A++Y +N E + L ++Y + Sbjct: 181 LSVEVRYFEAL-GLEKPMPEDGYRGEDIIAIGKRIAEEYGDRFVNEEESERLAFFREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + ++ +R DL+ + D++ SE ++ I ++ + +G+VYE Sbjct: 240 KYELEKLRKDLENFRVPFDVWYSETSLYQN--GKIDKALEAIREKGHVYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRST GDD DR L+K DG+YTY D+AY K K +RGFD +I V G+ Sbjct: 288 ------EDGATWFRSTTFGDDKDRVLIKKDGTYTYLLPDIAYHKDKLDRGFDKLINVWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ +K + V + +LV LY++G +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMKAAIEALGYEKGTLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+VR+ R +DFD S ENPV+Y QYA+AR S+ RQ ++ Sbjct: 402 LDAVRYFFAMRSADTHMDFDLDLAVSTSNENPVYYAQYAHARICSMLRQGEEQG------ 455 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L P + E L+ + +P + A + P+++ Y+YDLAS H ++ Sbjct: 456 LKPAVDLDFSHIQSEKEYDLLKTIGSFPEAVAEAAEKRIPHRVTNYIYDLASALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + N + + RL L+ A +N+ L +IGV +P +M Sbjct: 516 E------KVIDPENEEKSRARLALMKATQITLNNALQLIGVSAPEKM 556 >gi|254464840|ref|ZP_05078251.1| arginyl-tRNA synthetase [Rhodobacterales bacterium Y4I] gi|206685748|gb|EDZ46230.1| arginyl-tRNA synthetase [Rhodobacterales bacterium Y4I] Length = 581 Score = 604 bits (1557), Expect = e-170, Method: Composition-based stats. Identities = 268/586 (45%), Positives = 378/586 (64%), Gaps = 7/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF D S + + L + + + + + + +E PRD AHG ++TNAAM+L++P + Sbjct: 1 MNLFTDIRSLVIDSLTAMTGEGALPEGLDFANVAVEPPRDAAHGDMATNAAMVLAKPAKM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + A++ D + S +AG GF+NL+L+P + +L S++ +G ++GR+ IG Sbjct: 61 KPRDIAEALAAKLAADERITSAEVAGPGFLNLWLAPGIWQGVLKSVLDAGTDFGRSGIGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGP+HVGH R AV GD LA+L+A++GY+VTREYYIND G Q++ LA Sbjct: 121 GKRVNVEYVSANPTGPLHVGHTRGAVFGDALAALLAYAGYDVTREYYINDGGGQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + D +G YPG YL VG+ L DK L+ PEE WL V++++ Sbjct: 181 SVYLRYLEA-HGQDIAFADGTYPGDYLVPVGQALKDKAGDAYLDQPEEVWLAEVREFATD 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL L I+ D+F SE + I + L +G +Y+G+L PPK K Sbjct: 240 AMMALIREDLAQLGIEMDVFYSEKSLY--GTGKIEAALKALESKGLIYQGVLEPPKGKKP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + R+Q LF+ST GDDVDR + KSDG++TYFA D+AY K ERGFD +I V G+D Sbjct: 298 DDWE-PREQTLFKSTDHGDDVDRAVKKSDGTWTYFAPDIAYHYDKVERGFDELIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S+ K +++ LC+LV+LY+DG KMSKRAG F+TLR VVD VG Sbjct: 357 HGGYVKRMKAAVSALSDGKVPLDIKLCQLVKLYKDGQEFKMSKRAGTFVTLRDVVDAVGP 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RFM+L RKN + DFD K EQSK+NPVFYVQYA AR S R+A++ D Sbjct: 417 DVTRFMLLTRKNDQGFDFDLDKALEQSKDNPVFYVQYANARICSTLRKAEEQGIAADDAA 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + S D ++L + LAE+PR++E A EP+++AFYLYDLAS HG + G Sbjct: 477 LNAADLSLVS--DPAQLAVAKKLAEWPRLVEVAARTHEPHRVAFYLYDLASELHGLYHMG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + LRFV +++ T L L AV+ +I++GL I+GV+ EM Sbjct: 535 KSQEGLRFVNESSQSATHANLALAKAVSVVISAGLGILGVKPAEEM 580 >gi|126725250|ref|ZP_01741092.1| arginyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150] gi|126704454|gb|EBA03545.1| arginyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150] Length = 593 Score = 604 bits (1557), Expect = e-170, Method: Composition-based stats. Identities = 263/586 (44%), Positives = 378/586 (64%), Gaps = 7/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFAD + + + L + + + + + +E PRD +HG ++TNAAM+L++ Sbjct: 13 MNLFADIRALVIDSLTVMTDEGVLPSGLDFANVTVEPPRDASHGDMATNAAMVLAKAAKS 72 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + A++ D VD +AG GF+NL LS + + ++ + +G ++GR+ +G+ Sbjct: 73 KPRDIAEALAAKLAEDARVDLAEVAGPGFLNLRLSSAIWHNVTAATLANGTDFGRSNMGE 132 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 +VN+E+VSANPTGP+HVGH R AV GD LASL+ F+G++VTREYYIND GAQ++ LA Sbjct: 133 NKRVNVEYVSANPTGPLHVGHTRGAVFGDALASLLDFAGFDVTREYYINDGGAQVDVLAR 192 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RYQ+A + +G YPG YL VG+ L +K L+ E WL V++YS + Sbjct: 193 SVYLRYQEA-HGQKVAFEDGTYPGDYLIEVGQALKEKVGDAYLDQDESVWLQEVREYSTE 251 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL AL ++ D F SE + I + +L +G +Y+G L PPK K Sbjct: 252 AMMNLIREDLLALGVKMDHFYSEKSLY--GTGQIEAALADLDEKGLIYQGYLEPPKGKLP 309 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LFRST GDDVDRP+ KSDGS+TYFA D+AY K RG+D +I + G+D Sbjct: 310 EDWEA-REQTLFRSTAHGDDVDRPVKKSDGSWTYFAPDIAYHYDKVTRGYDLLIDIFGAD 368 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A +A+S +++ L +LV+L ++G P KMSKRAG F+TLR VVD+VG Sbjct: 369 HGGYVKRMKAAVSALSNGTVPLDIKLTQLVKLLKNGEPFKMSKRAGTFVTLRDVVDQVGR 428 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF+ML RKN LDFDF KV EQSK+NPVFYVQYA+AR +S+ R+A D +D Sbjct: 429 DVTRFVMLTRKNDAPLDFDFDKVVEQSKDNPVFYVQYAHARIKSVMRRATDAG--IDVSP 486 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 +EL L LAE+PR++E A + EP+++AFYLY+L+S H HW+ G Sbjct: 487 AALAAADMSRASHDAELGLAKKLAEWPRLVEIAARSNEPHRIAFYLYELSSDLHAHWNKG 546 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ LRF+Q + + T ++ L+ AV+ +I++GL I+GVE EM Sbjct: 547 NDDVSLRFLQEGDSETTQAKIALIFAVSIVISAGLGILGVEPVEEM 592 >gi|85707713|ref|ZP_01038779.1| arginyl-tRNA synthetase [Erythrobacter sp. NAP1] gi|85689247|gb|EAQ29250.1| arginyl-tRNA synthetase [Erythrobacter sp. NAP1] Length = 583 Score = 604 bits (1557), Expect = e-170, Method: Composition-based stats. Identities = 260/587 (44%), Positives = 368/587 (62%), Gaps = 14/587 (2%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKK-ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 L+A ++ ++ L+ + + + + +E PRD +HG L+TNAAM+L++P +P Sbjct: 7 LYAAYAGTIQTALQALVADGTLPEGTSFANVTLEPPRDPSHGDLATNAAMVLAKPAKTNP 66 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +AE I ++K DP + S IAG GF+NL L PS L +I G EYGR+ +G GT Sbjct: 67 RALAEAIATKLKSDPTIVSAEIAGPGFLNLRLDPSAWLGELETITKLGDEYGRSSMGAGT 126 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 VN+E+VSANPTGPMH+GHCR AVVGD LASL+ +G+EVTREYYINDAG Q++TLA S Sbjct: 127 TVNVEYVSANPTGPMHMGHCRGAVVGDALASLLELAGHEVTREYYINDAGGQVDTLARSA 186 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 RY++AL N ++PEGYYPG YL +G+ LA + + + PEE+WLP + +V+ M Sbjct: 187 HLRYREALGENIGEIPEGYYPGAYLIPIGEYLAQEVGEKYRDAPEEEWLPYFRAEAVEKM 246 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 M +I+ DL L I HD+F SE H + L VY+G+L PK K + Sbjct: 247 MDLIKSDLALLGIHHDVFASEAALHA--AGKPDEAEKWLREHDLVYDGVLEAPKGKAPPE 304 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 + LFRST GDD DRP+ KSDG +TYF ADLAY K D +I + G+DH+ Sbjct: 305 DWEPVELPLFRSTKFGDDQDRPIKKSDGKWTYFGADLAYHMQK-AADADELIDIWGADHA 363 Query: 362 GYVKRLEAVAAAVSEKKAQ---INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 G VKR++A AA+SE K + +V L ++V+L R G P+KMSKR+G+FIT+ +V+EVG Sbjct: 364 GTVKRIKAAVAALSEGKGKPTPFDVKLVQMVQLMRGGEPVKMSKRSGNFITIADMVEEVG 423 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D VRF ML RK ++FDF KV E SK+NPV+YVQYA+AR +S R+A D + Sbjct: 424 KDVVRFTMLTRKPEAQMEFDFAKVVEASKDNPVWYVQYAHARIQSTIRKAADE-EGVTPS 482 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 N + + E+ LI A++PR +E+A A+EP+++AFYLYDLA+ + +S Sbjct: 483 TDALNQLGSD------EIALIRRAAQFPREVESAAKAREPHRIAFYLYDLATDLNSFYSL 536 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G P RF+ +++ LT RL L A+ ++ +GL ++GVE+ + M Sbjct: 537 GNTEPEKRFILKHDKGLTAARLFLASAIGQVLRNGLRVLGVEAVDRM 583 >gi|294083991|ref|YP_003550748.1| arginyl-tRNa synthetase [Candidatus Puniceispirillum marinum IMCC1322] gi|292663563|gb|ADE38664.1| Arginyl-tRNA synthetase [Candidatus Puniceispirillum marinum IMCC1322] Length = 572 Score = 604 bits (1557), Expect = e-170, Method: Composition-based stats. Identities = 267/586 (45%), Positives = 387/586 (66%), Gaps = 15/586 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F F ++ + ++ + K++ + R+V E PRD HG L+TNAAM+L++ + Sbjct: 1 MNIFTYFETQFAALITQLGASGHITKELDISRVVFELPRDPDHGDLATNAAMVLAKSAAM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +A L+ +K VD+V IAG GFINL ++P + +S I+ +G +YGRN G+ Sbjct: 61 KPRELAVLLSEELKKIDGVDAVEIAGPGFINLQINPLLWAREISDILTAGYDYGRNNAGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G VNIE+VSANPTGP+H H R AV+GD LA LMAFSG++VT+EYY+NDAG Q++ LA Sbjct: 121 GANVNIEYVSANPTGPLHAAHARGAVIGDALAGLMAFSGWQVTKEYYVNDAGGQVDILAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +AL + ++ G YPG YLK VG +LA KY + PE +WL + +SV Sbjct: 181 SVYLRYCEAL-GDTIEIEAGLYPGAYLKDVGTKLAAKYGDKFHKRPEAEWLSTFRLFSVS 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 +M+ I+DDL+AL IQ D F SE + + ++ ID L G+VY G+L PPK K Sbjct: 240 DIMEGIKDDLQALGIQMDRFSSERELV--ESGAVQKAIDKLKANGHVYTGVLQPPKGKEP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+QLLFRST GDD DRPL KS+GS+TYFA+D++Y K ER +I ++G D Sbjct: 298 EDWE-PREQLLFRSTEFGDDTDRPLQKSNGSWTYFASDVSYHFDKLERTKGPLIDILGVD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+KR+ A A+S +K +++ C+LV L +G P+KMSKRAG+F+T+R V+D VGS Sbjct: 357 HGGYLKRMTAAVEAISGQKNMLDIRFCQLVNLMENGKPVKMSKRAGNFVTVRDVIDAVGS 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D +RF+ML R+N + LDFD+ KV EQS++NPVFYVQYA+AR S+ RQ + + D + Sbjct: 417 DVIRFIMLTRRNDQTLDFDYAKVTEQSRDNPVFYVQYAHARACSVLRQIGKVPHEADLSV 476 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 D +EL ++ LA +P+++E+A A E +++AF+L DLAS FH W+ G Sbjct: 477 LK----------DPAELAVLKMLASWPKLVESAARAHEAHRIAFFLVDLASSFHSLWNAG 526 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 RENP LRF+ +N+ +T RLQLV A + +I +GLN++ +++ +EM Sbjct: 527 RENPELRFILDDNQTITAARLQLVKATSLVIATGLNVLSIKALDEM 572 >gi|241762271|ref|ZP_04760352.1| arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260752688|ref|YP_003225581.1| arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|241373174|gb|EER62804.1| arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258552051|gb|ACV74997.1| arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 574 Score = 603 bits (1556), Expect = e-170, Method: Composition-based stats. Identities = 269/586 (45%), Positives = 374/586 (63%), Gaps = 13/586 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M L+ F+++L + L + + + + R+ +E PRD +HG L+ NAAM+L++ Sbjct: 1 MTLYRHFAAQLSSILDTFEAEGLLPAGLDRSRVAVEPPRDPSHGDLAINAAMVLAKAAKT 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +AE +V + V+SV IAG GFIN+ L+ RK L+ I+ G +YGR+ IG+ Sbjct: 61 APRALAEKLVESLSQLEGVESVEIAGPGFINIRLTDDCWRKELTHILEQGQDYGRSDIGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 +VN+E+VSANPTGPMH+GHCR AVVGD LASL+ F+GY+VTREYY+NDAG Q+ TLA Sbjct: 121 NLRVNVEYVSANPTGPMHMGHCRGAVVGDALASLLDFAGYKVTREYYVNDAGQQVQTLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++AL + +PEG YPG YL VGK LA+KY LN PE +WL + ++ +V Sbjct: 181 SAYMRYREAL-GEEITIPEGLYPGDYLVPVGKLLAEKYGDRYLNAPESEWLALFRETTVA 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IRDDL L I HD F SE H+ ++ ID L ++G +Y+G+L PK +T Sbjct: 240 AMMDMIRDDLALLGIHHDKFTSEAALHK--AGIVQKAIDKLEKEGLIYKGVLEAPKGETP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + + LFR+T GDD DRP+ KSDGSYTYF ADLAY K D ++ + G+D Sbjct: 298 EDWE-PVELTLFRATKFGDDSDRPVQKSDGSYTYFGADLAYHAEKAAT-ADQLVDIWGAD 355 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H+G VKR++A AA+++ K ++V L ++V L R G P+KMSKR+G+F+TL VV EVG Sbjct: 356 HAGTVKRIKAAVAALTQNKVPLDVKLVQMVHLLRGGEPVKMSKRSGNFVTLADVVSEVGR 415 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRF ML RK +DFDF KV E SK+NPVFYVQYA+AR S+ R+ L + Sbjct: 416 DVVRFSMLTRKADAQMDFDFEKVIEASKDNPVFYVQYAHARVHSLHRR-------LVSEN 468 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + D EL LI A++PR+IE A +A EP+++ FYL+ LA+ FH W+ G Sbjct: 469 ITLPEKADLNLLDKEELALIQQAAQFPRLIEAAAVAHEPHRIVFYLFTLAADFHSLWNKG 528 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +NP RF+ +N T RL L AV +I +GL ++GV + EM Sbjct: 529 NDNPDRRFLLPDNPAKTAARLALADAVGQVIRNGLGVVGVNASEEM 574 >gi|239828630|ref|YP_002951254.1| arginyl-tRNA synthetase [Geobacillus sp. WCH70] gi|259511648|sp|C5D9R0|SYR_GEOSW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|239808923|gb|ACS25988.1| arginyl-tRNA synthetase [Geobacillus sp. WCH70] Length = 556 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 207/587 (35%), Positives = 325/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLK-EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + R+K +K + ++ + +++E PR+ AHG STN AM L+R Sbjct: 1 MNIVEQMKERIKEEIKRAVVSAGFAAEEEVPEVILEVPREKAHGDYSTNMAMQLARIAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IV + K ++ + IAG GFIN Y+ YL +++ +I+ +G YG +G Sbjct: 61 PPRAIAEEIVQHMDKTKASIEKIDIAGPGFINFYMDNRYLTELIPTIIQAGASYGETNVG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV +EFVSANPTG +H+GH R A VGD+L +++ +G++VTREYYINDAG QI LA Sbjct: 121 KGQKVQVEFVSANPTGDLHLGHARGAAVGDSLCNILEKAGFDVTREYYINDAGNQIYNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 SV RY QAL D ++PE Y G + +GK+LA+++ + ++ E++ L ++Y + Sbjct: 181 KSVEARYFQAL-GIDKEMPEDGYYGEDIIEIGKKLAEEHGDKYVHMDEQERLAFFREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 ++ I+ DL + D++ SE + I + + L +G++YE Sbjct: 240 NYELEKIKKDLADFRVTFDVWYSETSLYT--SGKIDETLALLRERGHIYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 FRST GDD DR L+K DG+YTY D+AY + K RGF +I + G+ Sbjct: 288 ------KDGATWFRSTTFGDDKDRVLIKKDGTYTYLLPDIAYHQDKLRRGFTKIINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ + V + +LV LY++G +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMKAAIEALGYDPDVLEVEIIQLVNLYQNGERVKMSKRTGKAVTMRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ R + LDFD QS ENPV+YVQYA+AR SI RQ +++ + D Sbjct: 402 LDATRYFFAMRSSDTHLDFDMDLAVSQSNENPVYYVQYAHARVSSILRQGEELQLSYEGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L + E++L+ L E+P + A I + P+++ Y+++LAS H ++ Sbjct: 462 L------QLDYIQTEKEIELLKKLGEFPSAVSEAAIKRMPHRITGYVFELASALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + N + + RL L+ AV + + L +IGV +P +M Sbjct: 516 E------KVLDPENIEKSRARLALMKAVQITLQNALALIGVSAPEKM 556 >gi|85373141|ref|YP_457203.1| arginyl-tRNA synthetase [Erythrobacter litoralis HTCC2594] gi|84786224|gb|ABC62406.1| arginyl-tRNA synthetase [Erythrobacter litoralis HTCC2594] Length = 581 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 258/587 (43%), Positives = 366/587 (62%), Gaps = 16/587 (2%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 + A F++++ L ++ + + + R + +E PRD +HG L+TNAAM+L++ +P Sbjct: 7 IHAAFAAKVDAVLSALEAEGTLPAGVERRNVTVEPPRDPSHGDLATNAAMVLAKQAATNP 66 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +AE IV ++ DPD+ IAG GFINL L+ L +I G YGR+ +G+G Sbjct: 67 RALAEKIVEHLERDPDITETAIAGPGFINLRLADRAWLGELEAIAALGEGYGRSQMGEGK 126 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 +VN+E+VSANPTGPMH+GHCR AVVGD LA+L+ ++G+EVTREYY+NDAG Q++TLA S Sbjct: 127 RVNVEYVSANPTGPMHMGHCRGAVVGDALAALLEYAGHEVTREYYVNDAGGQVDTLARSA 186 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 RY++AL + +P G YPG YLK VG+ LA + + PE++WLPI + +V+ M Sbjct: 187 HLRYREALGEDIGAIPGGLYPGDYLKPVGEYLAQELGDRFKDAPEDEWLPIFRAEAVEKM 246 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 M +IR DL L I HD+F SE L G VY+G+L PK K + Sbjct: 247 MDVIRADLALLGIHHDLFSSEAALQA--AGKPEQAEAWLREHGLVYDGVLEQPKGKVIED 304 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 + L FRST GDD DRP+ KSDG +TYF ADLAY K E D +I + G+DH+ Sbjct: 305 WEPVELPL-FRSTKFGDDQDRPIRKSDGKWTYFGADLAYHMQKAEE-ADALIDIWGADHA 362 Query: 362 GYVKRLEAVAAAVSEKKAQ---INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 G VKR++A AA+SE + + +V L ++V+L R G P+KMSKR+G+FIT+ +V+EVG Sbjct: 363 GTVKRIKAAVAALSEGQGKPIPFDVKLVQMVQLMRAGEPVKMSKRSGNFITIADMVEEVG 422 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D VRF ML RK +DFDF KV E SK+NPVFYVQYA+AR S R+A+ + + Sbjct: 423 KDVVRFTMLTRKPEAQMDFDFAKVVEASKDNPVFYVQYAHARIHSTLRKARAEGIEPSTE 482 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + EL LI A++PR++E A A+EP+++AF+LYDLAS FH ++ Sbjct: 483 AIAQ--------LGEEELGLIKQAAQFPRIVEAAAAAREPHRIAFFLYDLASAFHSFYNL 534 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G +NP R + A + L+ RL L+ + +I +GL ++GVE+ EM Sbjct: 535 GNDNPSKRVILAQDPALSAARLFLIDTIGQVIRNGLTLLGVEAVEEM 581 >gi|212640560|ref|YP_002317080.1| arginyl-tRNA synthetase [Anoxybacillus flavithermus WK1] gi|226701372|sp|B7GMJ3|SYR_ANOFW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|212562040|gb|ACJ35095.1| Arginyl-tRNA synthetase [Anoxybacillus flavithermus WK1] Length = 556 Score = 601 bits (1550), Expect = e-169, Method: Composition-based stats. Identities = 211/587 (35%), Positives = 322/587 (54%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + +LK +KE + V + + +++E P+D AHG STN AM L+R Sbjct: 1 MNIVEQMKQKLKEEIKEAVIRSGVATEADVPSVILETPKDKAHGDYSTNVAMQLARVAKK 60 Query: 60 DPLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IV + V IAG GFIN Y+ YL +++ +I+ +G YG +G Sbjct: 61 APRMIAEDIVRHFNGEAVFVKKVDIAGPGFINFYMDNRYLTELVPAILQAGDAYGETNVG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 +G KV +EFVSANPTG +H+GH R A VGD+L +++ +G++VTREYYINDAG QI LA Sbjct: 121 QGQKVQVEFVSANPTGSLHLGHARGAAVGDSLCNILKKAGFDVTREYYINDAGNQIANLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 SV RY QAL D+PE Y G + +GK+LA+++ + + E++ L + ++Y + Sbjct: 181 KSVEARYFQAL-GIKKDMPEDGYFGEDIIELGKKLAEEHGDKFVALDEQERLQLFREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 M I+ DL + D++ SE + I ++ L +G++YE Sbjct: 240 AFEMDKIKKDLADFRVTFDVWYSETSLYHN--GKIDKALETLREKGHIYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 FRST GDD DR L+K DG+YTY D+AY + K ERGF+ +I + G+ Sbjct: 288 ------QDGATWFRSTTFGDDKDRVLIKQDGTYTYLLPDIAYHQDKLERGFEKIINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A AA+ + V + +LV LY++G ++MSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIAALGYDPDVLEVEIIQLVSLYQNGEKVRMSKRTGKAVTLRDLMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ R + LDFD QS ENPV+Y QYA+AR S+ RQ ++ D D Sbjct: 402 LDATRYFFAMRSSDTHLDFDMDLAVSQSNENPVYYAQYAHARVCSMLRQGEEQGWRYDGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L E E+ L+ L E+P + A + + P+++ Y++DLAS H ++ Sbjct: 462 L------SFTYELAEKEIDLLKKLGEFPSAVAEAAVKRSPHRMTNYIFDLASALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + A N + + RL L+ AV + + L ++GV +P +M Sbjct: 516 E------KVLDAANVEKSRARLALMKAVQITLKNALALVGVHAPEKM 556 >gi|319408659|emb|CBI82314.1| Arginyl-tRNA synthetase [Bartonella schoenbuchensis R1] Length = 534 Score = 601 bits (1550), Expect = e-169, Method: Composition-based stats. Identities = 288/537 (53%), Positives = 395/537 (73%), Gaps = 6/537 (1%) Query: 51 MILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI 110 M+L++ +GL+P +AE I+ +K D ++ + +AG GFIN+ L+ S+ + +L S++ +GI Sbjct: 1 MVLAKSVGLNPRILAEKIIELLKNDQSIECINVAGPGFINIKLTRSFWQDVLKSMIEAGI 60 Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170 YGR+ IG+G +VN+E+VSANPTGPMHVGHCR AV+GD L++L+ F GY VT+EYYINDA Sbjct: 61 AYGRSQIGQGKRVNVEYVSANPTGPMHVGHCRGAVIGDVLSNLLQFVGYNVTKEYYINDA 120 Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230 G Q+ LA SV RY+QAL +++PEG YPG YL +G+ L ++ +LL + + L Sbjct: 121 GGQVEVLAHSVLLRYRQALGQTINEIPEGLYPGEYLIPLGQSLVQEFGDQLLTIDKSEAL 180 Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290 IVK+ ++ AMM +IRDDL ALNIQHD+F SE + + IR+ I++L GY+Y+GI Sbjct: 181 SIVKERAIDAMMAMIRDDLSALNIQHDVFFSERMLYADNAQAIRNAINDLTLNGYIYKGI 240 Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350 L PPK K + + +Q LFRST VGDD DR L+KS+GSYTYFAAD+AYF+ K+ R FD Sbjct: 241 LSPPKGKILEDWE-PHEQTLFRSTDVGDDQDRVLIKSNGSYTYFAADIAYFRDKFNRHFD 299 Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 MIY++G+DH+GYVKRLEAVA A+S KA++ V LC+LV+L+R+G P++MSKR G F+TL Sbjct: 300 EMIYILGADHAGYVKRLEAVAKAISGDKAKLAVFLCQLVKLFRNGQPVRMSKREGSFVTL 359 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R VV+EVG D VRFMML+RK LDFDF KV EQSK+NP+FYVQYA ARC S+FRQA++ Sbjct: 360 RDVVEEVGCDPVRFMMLYRKCEAPLDFDFTKVTEQSKDNPIFYVQYASARCHSVFRQAQE 419 Query: 471 IFPDLDFDLFPRNVIP--QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 L D N++ + D SE+ LI LAEYPR+IE A I +EP++LAFYLYDL Sbjct: 420 ---SLHIDNLSSNIMIPYLDKLIDDSEISLIRKLAEYPRIIEQAVIHKEPHRLAFYLYDL 476 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 AS FHGHW+ G +NP LRF + +++L++ RL L+ AV +I++SGL I+G+++ EM Sbjct: 477 ASNFHGHWNKGNDNPDLRFTKLEDKELSLARLGLIQAVINILSSGLQIVGIKASTEM 533 >gi|307294518|ref|ZP_07574360.1| arginyl-tRNA synthetase [Sphingobium chlorophenolicum L-1] gi|306878992|gb|EFN10210.1| arginyl-tRNA synthetase [Sphingobium chlorophenolicum L-1] Length = 575 Score = 601 bits (1550), Expect = e-169, Method: Composition-based stats. Identities = 265/586 (45%), Positives = 365/586 (62%), Gaps = 13/586 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGL 59 M L+ F++ L L ++ + + + + +E PRD +HG L+TNAAM+L++P G Sbjct: 1 MSLYNRFTAHLDAVLDALEADGTLPAGLNRKPVTVEPPRDPSHGDLATNAAMVLAKPAGT 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A+ IVA ++ +V+ IAG GFINL L+ + R L++I EYGR+ G+ Sbjct: 61 NPRALAQKIVAGLERLDEVEGASIAGPGFINLRLTDATWRAELAAIHAEAEEYGRSSTGE 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G VN+E+VSANPTGPMH+GHCR AVVGD LA+L+ G++V REYYINDAG Q++ LA Sbjct: 121 GVTVNVEYVSANPTGPMHMGHCRGAVVGDALATLLEHVGHKVIREYYINDAGGQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S RY++AL + +PEG YPG YL VG+ LA +Y + + PE +WL + +V Sbjct: 181 SAHVRYREALSEDVGGIPEGLYPGDYLVPVGQALAAEYGDKYVGAPESEWLASFRTKAVA 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL L I HDIF SE + L VY+G+L PK +T Sbjct: 241 AMMDMIRSDLALLGIHHDIFSSEAELQA--AGKPEAAEKWLREHDLVYDGVLEAPKGETP 298 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + L FRST GDD DRP+ KS+GS+TYF AD+AY K + D +I + G+D Sbjct: 299 EDWEPVELPL-FRSTKFGDDQDRPIKKSNGSWTYFGADMAYHYQKAQT-ADQLIDIWGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H G VKR++A AA++E KA+ +V L ++VRL RDG P+KMSKRAG+F+TL VV EVG Sbjct: 357 HGGTVKRIQAAVAALTEGKARFDVKLIQMVRLLRDGEPVKMSKRAGNFVTLADVVREVGK 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRF ML RK +DFDF KV E SK+NPVFYVQYA+AR S+ R+A++ DL Sbjct: 417 DVVRFTMLTRKADAQMDFDFAKVVEASKDNPVFYVQYAHARISSLGRRAEEAGIDLP--- 473 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 P S T EL L+ ++PRV+E A A+EP+++AFYL DLAS FH W+ G Sbjct: 474 -----APDLSRLGTDELGLVKLAVQFPRVVEGAASAREPHRIAFYLNDLASAFHSWWNLG 528 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +NP+ R + ++ T RL L + II +GL ++GV + EM Sbjct: 529 NDNPQARVILTDDPATTSARLFLSRGIGQIIRNGLALMGVAALTEM 574 >gi|283856343|ref|YP_162578.2| arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4] gi|283775340|gb|AAV89467.2| arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4] Length = 574 Score = 601 bits (1550), Expect = e-169, Method: Composition-based stats. Identities = 269/586 (45%), Positives = 374/586 (63%), Gaps = 13/586 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M L+ F+++L + L + + + + R+ +E PRD +HG L+ NAAM+L++ Sbjct: 1 MTLYRHFAAQLSSILDTFEAEGLLPAGLDRSRVAVEPPRDPSHGDLAINAAMVLAKAAKT 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +AE +V + V+SV IAG GFIN+ L+ RK L+ I+ G +YGR+ IG+ Sbjct: 61 APRALAEKLVESLSQLEGVESVEIAGPGFINIRLTDDCWRKELTHILEQGQDYGRSDIGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 +VN+E+VSANPTGPMH+GHCR AVVGD LASL+ F+GY+VTREYY+NDAG Q+ TLA Sbjct: 121 NLRVNVEYVSANPTGPMHMGHCRGAVVGDALASLLDFAGYKVTREYYVNDAGQQVQTLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++AL + +PEG YPG YL VGK LA+KY LN PE +WL + ++ +V Sbjct: 181 SAYMRYREAL-GEEITIPEGLYPGDYLVPVGKLLAEKYGDRYLNAPESEWLALFRETTVA 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IRDDL L I HD F SE H+ ++ ID L ++G +Y+G+L PK +T Sbjct: 240 AMMDMIRDDLALLGIHHDKFTSEAALHK--AGIVQKAIDKLEKEGLIYKGVLEAPKGETP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + + LFR+T GDD DRP+ KSDGSYTYF ADLAY K D ++ + G+D Sbjct: 298 EDWE-PVELTLFRATKFGDDSDRPVQKSDGSYTYFGADLAYHAEKAAT-ADQLVDIWGAD 355 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H+G VKR++A AA+++ K ++V L ++V L R G P+KMSKR+G+F+TL VV EVG Sbjct: 356 HAGTVKRIKAAVAALTQNKVPLDVKLVQMVHLLRGGEPVKMSKRSGNFVTLADVVSEVGR 415 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRF ML RK +DFDF KV E SK+NPVFYVQYA+AR S+ R+ L + Sbjct: 416 DVVRFSMLTRKADAQMDFDFEKVIEASKDNPVFYVQYAHARVHSLHRR-------LVSEN 468 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + D EL LI A++PR+IE A +A EP+++ FYL+ LA+ FH W+ G Sbjct: 469 ITLPEKADLNLLDKEELALIQQAAQFPRLIEAAAVAPEPHRIVFYLFTLAADFHSLWNKG 528 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +NP RF+ +N T RL L AV +I +GL ++GV + EM Sbjct: 529 NDNPDRRFLLPDNPAKTAARLALADAVGQVIRNGLGVVGVNASEEM 574 >gi|322419462|ref|YP_004198685.1| arginyl-tRNA synthetase [Geobacter sp. M18] gi|320125849|gb|ADW13409.1| arginyl-tRNA synthetase [Geobacter sp. M18] Length = 554 Score = 601 bits (1549), Expect = e-169, Method: Composition-based stats. Identities = 210/584 (35%), Positives = 325/584 (55%), Gaps = 31/584 (5%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + + ++ + ++ I +E+P HG +TN AM +++ P Sbjct: 1 MKEQLRACILKGIEGCFADGTLTSGVVPAINVEKPAHAEHGDFATNVAMQMAKQERKAPR 60 Query: 63 TIAELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +AE++V ++ ++S+ IAG GFIN ++ S RK+LS I +G YG++ +G G Sbjct: 61 AVAEILVQKLAGASELIESLEIAGPGFINFFIKDSAWRKVLSEIDRAGDRYGKSSVGAGK 120 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 KV +EFVSANPTGP+H+GH R A GD +ASL+ +G++V REYYINDAG Q+NTL LS Sbjct: 121 KVQVEFVSANPTGPLHIGHGRGAATGDAVASLLCSAGFDVQREYYINDAGNQMNTLGLSG 180 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 RYQ+ L D PE Y G Y+K + ++ ++ LN P+E+ + Sbjct: 181 LLRYQELL-GQKIDFPENCYQGDYIKDIARDAIARHGDRFLNAPQEEGGAFFAKMGGDLI 239 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 +K I +DL+ I+ D + SE D + I + +G++YE Sbjct: 240 LKGIDEDLQDFGIRFDNWFSEQSLF--DEGKVTSAIAEMQEKGHIYEL------------ 285 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 L F++T GDD DR +++S+G TYFA+D+AY + K+ RGFD +I V G+DH Sbjct: 286 ----DGALWFKTTAFGDDKDRVVVRSNGVTTYFASDIAYHRDKFARGFDWVIDVWGADHH 341 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 GYV RL++V + K + ++L +LV L RDG P+ MS R+G+F+TL+ VVDEVG D+ Sbjct: 342 GYVPRLKSVVQGLGRKPEDLGIILVQLVSLLRDGQPVAMSTRSGEFVTLKEVVDEVGRDA 401 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 RF L R++ LDFD K QS +NPV+YVQYA+AR +SIF A++ FD Sbjct: 402 ARFFFLMRRSDSQLDFDLELAKRQSSDNPVYYVQYAHARIKSIFDTARERGVAPAFDGVR 461 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 ++ + + LI L+ YP ++E A + EP+++ +YL +LA FH ++ R Sbjct: 462 LELLESADD-----MSLIKKLSLYPEILEGAAVNFEPHRITYYLQELAGEFHSFYNKSR- 515 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +LT RL L+H VA + + L ++G+ +P M Sbjct: 516 -----VITPEEPELTQARLFLLHCVAITLKNALTVLGISAPERM 554 >gi|52082258|ref|YP_081049.1| arginyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|52787649|ref|YP_093478.1| arginyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|319648132|ref|ZP_08002349.1| arginyl-tRNA synthetase [Bacillus sp. BT1B_CT2] gi|81384315|sp|Q65DS9|SYR_BACLD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|52005469|gb|AAU25411.1| arginyl-tRNA synthetase [Bacillus licheniformis ATCC 14580] gi|52350151|gb|AAU42785.1| ArgS [Bacillus licheniformis ATCC 14580] gi|317389767|gb|EFV70577.1| arginyl-tRNA synthetase [Bacillus sp. BT1B_CT2] Length = 556 Score = 601 bits (1549), Expect = e-169, Method: Composition-based stats. Identities = 213/587 (36%), Positives = 326/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + LK +KE K + E+ + +V+E P+D +HG STN AM L+R Sbjct: 1 MNIVEQMKDVLKQEIKEAVMKAGLAEESEIPEVVLEVPKDKSHGDYSTNMAMQLARIAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IVA K +D + IAG GFIN Y++ YL K++ +++ +G YG IG Sbjct: 61 APRNIAEEIVASFDKGKASIDKLDIAGPGFINFYMNNQYLTKLIPAVLEAGEAYGETNIG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G +V +EFVSANPTG +H+GH R A VGD+L +++ +GYEV+REYYINDAG QIN LA Sbjct: 121 GGERVQVEFVSANPTGNLHLGHARGAAVGDSLCNVLEKAGYEVSREYYINDAGNQINNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL D +PE Y G +K +G++LAD++ ++ E + L ++Y + Sbjct: 181 LSVEARYFQAL-GKDKPMPEDGYHGEDIKEIGQKLADEFGDRFVHEEESERLAFFREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + +R+DL+ + D++ SE ++ I ++ L +G++YE Sbjct: 240 KYELGKLREDLENFRVPFDVWYSETSLYQN--GKIDQALEALREKGHIYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRST GDD DR L+K DGSYTY D+AY K K +RGF +I V G+ Sbjct: 288 ------EDGATWFRSTAFGDDKDRVLIKKDGSYTYLLPDIAYHKDKLDRGFQKLINVWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + +LV LY++G +KMSKR G +T+R ++DEVG Sbjct: 342 DHHGYIPRMKAAIEALGYDKETLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIDEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+VR+ R +DFD S ENPV+Y QYA+AR S+ RQ ++ + + Sbjct: 402 LDAVRYFFAMRSADTHMDFDLDLAVSTSNENPVYYAQYAHARICSMLRQGEEKGISFEGN 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L E L+ + +P + +A + P+++ Y+++LASV H ++ Sbjct: 462 L------DLTKIGSEKEYDLLKVIGSFPEAVADAAEKRIPHRITNYIFELASVLHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + + + RL L+ A +N+ L +IGV +P +M Sbjct: 516 E------KVLDPADEEKSRARLSLMKATQITLNNALKLIGVSAPEKM 556 >gi|94496953|ref|ZP_01303527.1| arginyl-tRNA synthetase [Sphingomonas sp. SKA58] gi|94423629|gb|EAT08656.1| arginyl-tRNA synthetase [Sphingomonas sp. SKA58] Length = 575 Score = 600 bits (1548), Expect = e-169, Method: Composition-based stats. Identities = 265/586 (45%), Positives = 370/586 (63%), Gaps = 13/586 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGL 59 M L+ F++ L L ++ + + + + +E PRD +HG L+TNAAM+L++P G Sbjct: 1 MSLYTRFTAHLDAVLDALEADGVLPAGLNRKPVTVEPPRDSSHGDLATNAAMVLAKPAGT 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +AE IVA+++ +V S IAG GFIN+ L+ + R L++I G YGR+ +G+ Sbjct: 61 NPRALAEAIVAKLQALDEVTSAAIAGPGFINMTLTDATWRAELAAIHADGANYGRSALGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G VN+E+VSANPTGPMH+GHCR AVVGD LA+L+ ++G++V REYYINDAG Q++ LA Sbjct: 121 GVSVNVEYVSANPTGPMHMGHCRGAVVGDALATLLEYAGHKVIREYYINDAGGQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S RY++AL + +PEG YPG YL VG+ LA +Y PE WL + ++V Sbjct: 181 SAHLRYREALGEDVGAIPEGLYPGDYLVPVGQALAAEYGDRFAGAPESDWLVTFRTFAVA 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 MM +IR DL L I HDIF SE + + L VY+G+L PK + Sbjct: 241 KMMDMIRSDLALLGIHHDIFASEAELQA--AGKPDEAEAWLRAHDLVYDGVLEAPKGELP 298 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + L FRST GDD DRP+ KS+G++TYF AD+AY K + D +I + G+D Sbjct: 299 DDWEPVELPL-FRSTKFGDDQDRPIKKSNGAWTYFGADMAYHFQKAQ-SADQLIDIWGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H+G VKR++A AA++E KA+ +V L ++VRL RDG P+KMSKRAG+F+TL VV EVG Sbjct: 357 HAGTVKRIQAAVAALTEGKARFDVKLIQMVRLLRDGEPVKMSKRAGNFVTLADVVQEVGK 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRF ML RK +DFDF KV E SK+NPVFYVQYA+AR S+ R+A++ L Sbjct: 417 DVVRFTMLTRKADAQMDFDFAKVVEASKDNPVFYVQYAHARISSLGRRAEEAGIALP--- 473 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 P S T+EL L+ A++PRV+E A A+EP+++AFYL DLAS FHG W+ G Sbjct: 474 -----APDLSLLGTAELSLVKLAAQFPRVVEGAAQAREPHRIAFYLNDLASAFHGWWNMG 528 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++P R ++A++ LT RL L + II +GL ++GV + EM Sbjct: 529 NDDPGARVIRADDPALTSTRLSLAQGIGQIIRNGLALMGVAALTEM 574 >gi|311032050|ref|ZP_07710140.1| arginyl-tRNA synthetase [Bacillus sp. m3-13] Length = 556 Score = 600 bits (1547), Expect = e-169, Method: Composition-based stats. Identities = 216/587 (36%), Positives = 328/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + RLK +K K + ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNIVEQVQERLKEEIKASVLKAGLATEEQIPAVVLETPKDKTNGDYSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IV ++ + IAG GFIN Y+ +YL ++ +I+ +G +YGR+ IG Sbjct: 61 APRMIAEEIVKNFDQSKASIEKIDIAGPGFINFYMDNAYLTDLIPTILKAGTDYGRSNIG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG K+N+EFVSANPTG +H+GH R A VGD+L +++ +GYEVTREYYINDAG QIN LA Sbjct: 121 KGEKINVEFVSANPTGDLHLGHARGAAVGDSLCNVLDKAGYEVTREYYINDAGNQINNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL D ++PE Y G + +G+ +AD++ +N EE ++Y + Sbjct: 181 LSVEARYFQAL-GQDKEMPEDGYHGKDIIGIGQAIADEFGDRFVNESEEDRRSFFREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + MK ++ DL+ ++ D++ SE + I + + L QG++YE Sbjct: 240 KYEMKKLQQDLEEFRVRFDVWYSETSLYNN--GKIDEALATLREQGHIYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRST GDD +R L+K+DGSYTY D+AY + K +RG D +I + G+ Sbjct: 288 ------EEGATWFRSTEFGDDKNRVLIKNDGSYTYLTPDIAYHQDKLKRGHDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + +LV L+++G +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMKAAIEALGYGKDALEVEIIQLVHLFQNGEKMKMSKRTGKAVTMRDLMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+VR+ R LDFD QS ENPVFY QYA+AR S+ RQ ++ L+ + Sbjct: 402 LDAVRYFFAMRSGDTHLDFDMDLAVSQSNENPVFYAQYAHARICSMLRQGEEQGLSLEGN 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 E E+ L+ L EYP + A + P+++ Y ++LAS H ++ Sbjct: 462 FA------LEHISSEKEIDLLKKLGEYPLAVAEAAEKRIPHRITNYTFELASALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + A+N + + RL L+ AV + L +IGV +P +M Sbjct: 516 E------KVLDADNMEKSKARLGLMKAVQITLQDALKLIGVSAPEKM 556 >gi|319650937|ref|ZP_08005072.1| arginyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2] gi|317397293|gb|EFV77996.1| arginyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2] Length = 555 Score = 599 bits (1546), Expect = e-169, Method: Composition-based stats. Identities = 206/587 (35%), Positives = 327/587 (55%), Gaps = 34/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVE-KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + +LK +K+ K + ++ + +++E P++ AHG STN AM L+R Sbjct: 1 MNIVEQVQDKLKQEIKDAVVKAGLAAEEQIPDVILEIPKEKAHGDYSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE ++A ++ + IAG GFIN Y++ SYL ++ +++ +G +YG +G Sbjct: 61 APRMIAEELIAHFDSSKASIEKIEIAGPGFINFYMNNSYLTDLIPAVLEAGDQYGETTVG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 K+ +EFVSANPTG +H+GH R A VGD+L +++ +GYEV+REYYINDAG QIN LA Sbjct: 121 NSQKIQVEFVSANPTGDLHLGHARGAAVGDSLCNILDKAGYEVSREYYINDAGNQINNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL + ++P Y G + +GK+LAD+Y + ++ E++ ++Y + Sbjct: 181 LSVEARYFQAL-GLEKEMPADGYHGEDIIGIGKKLADEYGDKYVHADEKERFDFFREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + M ++ DL+ + D++ SE + I + L G++YE Sbjct: 240 KYEMAKLKQDLEDFRVPFDVWYSETSLYNN--GKIDTALQALKDNGHIYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRST GDD DR L+K+DGSYTY D+AY K K ERGF+ +I + G+ Sbjct: 288 ------EEGATWFRSTAFGDDKDRVLIKNDGSYTYLTPDIAYHKDKLERGFEKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ + + V + +LV LY++G +KMSKR G +T+R +V+EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDREALEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLVEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ R LDFD QS ENPV+Y QYA+AR SI RQ ++ + Sbjct: 402 LDATRYFFAMRSADTHLDFDLDLAVSQSNENPVYYAQYAHARISSILRQGEEQGMSAEAA 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + E+ ++ + E+P+ + A + P+++ Y+Y+LAS FH ++ Sbjct: 462 DYSLIQA-------EKEIDVLKKIGEFPQAVGEAAQKRMPHRITNYIYELASSFHSFYNA 514 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + A N + T RL L+ AV + + + L +IGV +P +M Sbjct: 515 E------KVLDAENPERTKARLALIKAVQTTLKNALKLIGVSAPEKM 555 >gi|294012801|ref|YP_003546261.1| arginyl-tRNA synthetase [Sphingobium japonicum UT26S] gi|292676131|dbj|BAI97649.1| arginyl-tRNA synthetase [Sphingobium japonicum UT26S] Length = 575 Score = 599 bits (1546), Expect = e-169, Method: Composition-based stats. Identities = 268/586 (45%), Positives = 368/586 (62%), Gaps = 13/586 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGL 59 M L+ F++ L L ++ + + + + +E PRD +HG L+TNAAM+L++P G Sbjct: 1 MSLYNRFTAHLDAVLDALEADGTLPAGLNRKPVTVEPPRDASHGDLATNAAMVLAKPAGS 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +AE I A ++ +V+ IAG GFINL L+ + R L++I V +YGR+ G Sbjct: 61 NPRALAEKIAAGLERLDEVEGASIAGPGFINLRLTDATWRAELAAIHVEAEDYGRSSTGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G VN+E+VSANPTGPMH+GHCR AVVGD LA+L+ G++V REYYINDAG Q++ LA Sbjct: 121 GVTVNVEYVSANPTGPMHMGHCRGAVVGDALATLLEHVGHKVIREYYINDAGGQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S RY++AL ++PEG YPG YL VG+ LA +Y + PE +WL + + +V Sbjct: 181 SAHVRYREALGETVGEIPEGLYPGDYLVPVGQALAAEYGDRYVGAPEGEWLVLFRTKAVA 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM++IR DL L I HDIF SE + L VY+G+L PK +T Sbjct: 241 AMMEMIRSDLALLGIHHDIFSSEAELQA--AGKPEAAEKWLREHDLVYDGVLEAPKGETP 298 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + L FRST GDD DRP+ KS+GS+TYF AD+AY K + D +I + G+D Sbjct: 299 EDWEPVELPL-FRSTRFGDDQDRPIRKSNGSWTYFGADMAYHYQKAQT-ADQLIDIWGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H G VKR++A AA++E KA+ +V L ++VRL RDG P+KMSKRAG+F+TL VV EVG Sbjct: 357 HGGTVKRIQAAVAALTEGKARFDVKLIQMVRLLRDGEPVKMSKRAGNFVTLADVVREVGK 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRF ML RK +DFDF KV E SK+NPVFYVQYA+AR S+ R+A++ DL Sbjct: 417 DVVRFTMLTRKADAQMDFDFAKVVEASKDNPVFYVQYAHARISSLGRRAEEAGMDLP--- 473 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 P S T EL L+ A++PRV+E A +A+EP+++AFYL DLAS FHG W+ G Sbjct: 474 -----APDLSRLGTEELGLVKLAAQFPRVVEGAALAREPHRIAFYLNDLASAFHGWWNLG 528 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +NPR R + ++ T RL L + II +GL ++GV + EM Sbjct: 529 NDNPRARVILTDDPATTSARLFLSRGIGQIIRNGLALMGVAALTEM 574 >gi|15616370|ref|NP_244675.1| arginyl-tRNA synthetase [Bacillus halodurans C-125] gi|20139930|sp|Q9K6C1|SYR1_BACHD RecName: Full=Arginyl-tRNA synthetase 1; AltName: Full=Arginine--tRNA ligase 1; Short=ArgRS 1 gi|10176433|dbj|BAB07527.1| arginyl-tRNA synthetase [Bacillus halodurans C-125] Length = 556 Score = 599 bits (1544), Expect = e-169, Method: Composition-based stats. Identities = 200/587 (34%), Positives = 324/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLK-EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +L+ + + + + +++E P++ AHG +TN AM L+R Sbjct: 1 MNKMEQMKQQLREEIVVAVKAAGLATDETIPEVILETPKEKAHGDFATNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE + A++ ++ + IAG GFIN +L SYLR+++ +++ + YG +G Sbjct: 61 APRLIAEELTAKLDRKRAAIEKIEIAGPGFINFFLDNSYLREMIPTVLRAESAYGETNVG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV +EFVSANPTG +H+GH R A VGD L +++A +GY+V+REYYINDAG QIN LA Sbjct: 121 KGKKVQVEFVSANPTGNLHLGHARGAAVGDALCNILAKAGYDVSREYYINDAGNQINNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LS+ RY QAL + D+PE Y G + GK+LA+ + + ++ E+ L ++Y + Sbjct: 181 LSLEARYFQAL-GMEKDMPEDGYHGEDIIQFGKDLAETHGDKFVHESSEERLAFFREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + ++ I+ DL+ + D + SE + + ++ L +G YE Sbjct: 240 KRELEKIKSDLEEFRVPFDNWYSETSLYT--TGKVEKTLNVLKEKGKTYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 L FRST GDD DR L+K+DGSYTY D++Y + K+ RGF+ +I + G+ Sbjct: 288 ------QDGALWFRSTEYGDDKDRVLVKNDGSYTYLTPDISYHEDKFLRGFEKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ +K Q++V + ++V L+++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYEKDQLDVQIIQMVSLFQNGEKVKMSKRTGKAVTLRDLMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ R LDFD +S ENPV+YVQYA+AR S+ R+ K++ D Sbjct: 402 IDATRYFFAMRSADSHLDFDMDLAVSKSNENPVYYVQYAHARVCSMLRKGKELGLSFDES 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + E L+ + E+P V+ A Q P+++ Y+++LAS H ++ Sbjct: 462 TDLSPIAS------EKEYDLLKKIGEFPEVVAEAAQKQMPHRITNYVHELASTLHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + N + + RL L+ A + + L+++GVE+P M Sbjct: 516 EQ------VINPENDEQSKARLALMKATQVTLKNALSLVGVEAPERM 556 >gi|329114103|ref|ZP_08242867.1| Arginyl-tRNA synthetase [Acetobacter pomorum DM001] gi|326696642|gb|EGE48319.1| Arginyl-tRNA synthetase [Acetobacter pomorum DM001] Length = 599 Score = 599 bits (1544), Expect = e-169, Method: Composition-based stats. Identities = 274/600 (45%), Positives = 378/600 (63%), Gaps = 23/600 (3%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 +F + + ++E+ V ++ L R+ + RD AHG ++TNAA++L++ P Sbjct: 5 VFQRYRQHVLAIVQELLP--NVPEETLARVELTPTRDPAHGDMATNAALLLAKVARRKPS 62 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 IA +VA ++ V SV AG GF+N+ L P +R +L +++ +G YG + GKG + Sbjct: 63 DIAADLVAALQKVDGVASVAAAGPGFVNITLKPDVMRSVLPAVLRAGEAYGASQAGKGLR 122 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VN+E+VSANPTGPMHVGHCR AVVGD LA+LMA +G+ VT+E+YINDAGAQ+ LA + + Sbjct: 123 VNVEYVSANPTGPMHVGHCRGAVVGDALANLMAKAGFAVTKEFYINDAGAQVKALAWAAY 182 Query: 183 WRYQQAL-----YNNDSDLPEGY--YPGVYLKHVGKELADKYSSELLN---------FPE 226 WRY QAL ++ S L G Y G YL VG ELA +Y ++L PE Sbjct: 183 WRYLQALGTKMTQDDFSALAPGGLQYQGEYLIPVGMELAAEYGNKLTETDADGAPLPAPE 242 Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD-FHRGDPSPIRDIIDNLARQGY 285 WL V+ ++V M+ I++DL AL + HD+F SE + HRG I L +QG Sbjct: 243 ATWLETVRGFAVAHMLTAIKEDLAALGVHHDVFTSEAEVLHRG---VTDAAISKLEQQGL 299 Query: 286 VYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY 345 +YEG+L PPK K + + +R+QLLFRST GDDVDRPL KSDG+ TYFA D+ Y K Sbjct: 300 LYEGVLEPPKGKLPEDWE-EREQLLFRSTQFGDDVDRPLRKSDGTNTYFANDIGYHADKV 358 Query: 346 ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAG 405 RG MI V G+DH GYVKR++A A++ + V+LC++V + RDG P+KMSKRAG Sbjct: 359 ARGAQMMIDVWGADHGGYVKRMKAAVKAITGDTVPLEVVLCQIVHILRDGQPVKMSKRAG 418 Query: 406 DFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF 465 F+TLR ++DEVG D+VRF ML RK+ ++FD V Q ++NPVFYVQYA+ARCRS+ Sbjct: 419 TFVTLRDLIDEVGRDAVRFTMLTRKSDAQMEFDLDLVVAQQRDNPVFYVQYAHARCRSVL 478 Query: 466 RQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 R A + D D ES +E+ LI LAE+PR++E A +A+EP+++AFYL Sbjct: 479 RAAAEAAVYGDTDDAALASASLESLTSDAEMALIRRLAEWPRMVEAAALAREPHRVAFYL 538 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 D+A FH W+ GR++ LRF+Q + + T RL LV A A +I SGL I+GVE EM Sbjct: 539 ADVAGDFHALWNRGRDDASLRFLQPDAVEATRARLALVAATAVVIRSGLAIMGVEPVEEM 598 >gi|311070252|ref|YP_003975175.1| arginyl-tRNA synthetase [Bacillus atrophaeus 1942] gi|310870769|gb|ADP34244.1| arginyl-tRNA synthetase [Bacillus atrophaeus 1942] Length = 556 Score = 599 bits (1544), Expect = e-169, Method: Composition-based stats. Identities = 208/587 (35%), Positives = 323/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + LK +K K + E+ + +++E P+D HG STN AM L+R Sbjct: 1 MNIAEQMKDVLKEEIKAAVLKAGLAEENQIPNVILETPKDKTHGDYSTNMAMQLARIAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IVA K ++ + IAG GFIN Y+ YL K++ S++ +G YG IG Sbjct: 61 APRQIAEDIVASFDKGKASIEKLDIAGPGFINFYMDNQYLTKLIPSVLEAGEAYGETNIG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G ++ +EFVSANPTG +H+GH R A VGD+L +++A +GY+V+REYYINDAG QIN LA Sbjct: 121 NGERIQVEFVSANPTGDLHLGHARGAAVGDSLCNVLAKAGYDVSREYYINDAGNQINNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY +AL + ++PE Y G + +GK LA++Y + E + ++Y + Sbjct: 181 LSVEVRYFEAL-GLEKEMPEDGYRGEDIIAIGKRLAEEYGDRFVKEEESERQKFFREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + ++ +R DL+ + +++ SE + + I ++ L +QG+VYE Sbjct: 240 KYELEKLRVDLENFRVPFNVWYSETSLY--ENGKIDKALEALRKQGHVYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRST GDD DR L+K DG+YTY D+AY K K +RGFD +I V G+ Sbjct: 288 ------EDGATWFRSTTFGDDKDRVLIKKDGTYTYLLPDIAYHKDKLDRGFDKLINVWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ +K + V + +LV LY++G +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMKAAIEALGYQKGTLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+VR+ R +DFD S +NPV+Y QYA+AR S+ RQ ++ Sbjct: 402 LDAVRYFFAMRSADTHMDFDLDLAVSTSNDNPVYYAQYAHARICSMLRQGEEQG------ 455 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L P + + E L+ + +P + A + P+++ Y+YDLA+ H ++ Sbjct: 456 LTPAADLDFSAVNSEKEYDLLKTIGGFPEAVAEAAEKRIPHRVTNYIYDLAASLHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + N + + RL L+ A +N+ L +IGV +P +M Sbjct: 516 E------KVIDPENEEKSRARLALMKATQITLNNALQLIGVSAPEKM 556 >gi|308175459|ref|YP_003922164.1| arginyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7] gi|307608323|emb|CBI44694.1| arginyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7] gi|328555439|gb|AEB25931.1| arginyl-tRNA synthetase [Bacillus amyloliquefaciens TA208] gi|328913809|gb|AEB65405.1| arginyl-tRNA synthetase [Bacillus amyloliquefaciens LL3] Length = 556 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 211/587 (35%), Positives = 322/587 (54%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + LK +K K + E+ + +++E P+D HG STN AM L+R Sbjct: 1 MNIAEQMKDVLKEEIKAAVLKAGLAEESQIPSVLLETPKDKTHGDYSTNMAMQLARIAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IVA K ++ + IAG GFIN Y++ YL K++ S++ +G YG +G Sbjct: 61 APRQIAEEIVAAFDKGKASIEKMDIAGPGFINFYMNNGYLTKLIPSVLEAGEHYGETNVG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 +G K+ +EFVSANPTG +H+GH R A VGD L S+++ +GY+V+REYYINDAG QIN LA Sbjct: 121 QGEKIQVEFVSANPTGDLHLGHARGAAVGDVLCSVLSKAGYDVSREYYINDAGNQINNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY +AL + +PE Y G + +GK+LA+ + ++ E + ++Y + Sbjct: 181 LSVEVRYFEAL-GLEKPMPEDGYRGEDIIAIGKKLAEDFGDRFVHEEESERQAFFREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + +R DL+ + D++ SE + + I ++ L +G+VYE Sbjct: 240 KYELDKLRSDLENFRVPFDVWYSETSLY--ENGKIDQALEALREKGHVYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRST GDD DR L+K DGSYTY D+AY K K +RGFD +I V G+ Sbjct: 288 ------EDGATWFRSTTFGDDKDRVLIKKDGSYTYLLPDIAYHKDKLDRGFDKLINVWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ KK + V + +LV LY++G +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMKAAIEALGYKKGTLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+VR+ R +DFD S ENPV+Y QYA+AR S+ RQ ++ Sbjct: 402 LDAVRYFFAMRSADTHMDFDLDLAVSTSNENPVYYAQYAHARICSMLRQGEEQG------ 455 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L P + E L+ + +P + A + P+++ Y+YDLAS H ++ Sbjct: 456 LKPAADLDFSHIQSEKEYDLLKTIGGFPEAVAEAAEKRIPHRITNYIYDLASALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + N++ + RL L+ A +N+ L +IGV +P +M Sbjct: 516 E------KVIDPENKEKSRARLALMKATQITLNNALQLIGVSAPEKM 556 >gi|149186244|ref|ZP_01864558.1| arginyl-tRNA synthetase [Erythrobacter sp. SD-21] gi|148830275|gb|EDL48712.1| arginyl-tRNA synthetase [Erythrobacter sp. SD-21] Length = 579 Score = 598 bits (1543), Expect = e-169, Method: Composition-based stats. Identities = 259/587 (44%), Positives = 363/587 (61%), Gaps = 18/587 (3%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 L A F++++ ++ + + + + +E PRD +HG L+TNAAM+L++ +P Sbjct: 7 LHAGFAAKIDAVFNALEMEGSLPPETDRSNVTVEPPRDPSHGDLATNAAMVLAKKAKTNP 66 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +AE IV + +PD+ IAG GFINL LS + L +I G +YGR+ IG G Sbjct: 67 RALAEKIVEHLTREPDITEASIAGPGFINLCLSEQAWLRELEAIAALGADYGRSQIGGGK 126 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 VNIE+VSANPTGPMH+GHCR AVVGD LA L+ FSG+ V REYY+NDAG Q++ LA S Sbjct: 127 TVNIEYVSANPTGPMHMGHCRGAVVGDALAGLLEFSGHTVIREYYVNDAGGQVDVLARSA 186 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 RY++AL + +PEG YPG YLK VG+ LA ++ + + PE WLP+ ++ +V AM Sbjct: 187 HLRYREALGEDIGAIPEGLYPGDYLKPVGERLAQEFGAAYKDAPESDWLPLFRERAVAAM 246 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 M +IR+DL L I HD+F SE + L G+VY+G+L PK K + Sbjct: 247 MDMIREDLALLGIHHDLFSSEAKLQA--AGKPEEAEAWLREHGFVYDGVLEAPKGKAPPE 304 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 + LFRST GDD DRP+ KS+G++TYF ADLAY K E D +I + G+DH+ Sbjct: 305 DWEPVELPLFRSTEFGDDQDRPIKKSNGAWTYFGADLAYHFQKAE-NADALIDIWGADHA 363 Query: 362 GYVKRLEAVAAAVSEKKAQ---INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 G VKR++A AA+++ + +V L ++V L R+G P+KMSKRAG F+TL VV+EVG Sbjct: 364 GTVKRIKAAVAALTKGAGRDVPFDVKLVQMVNLVRNGEPVKMSKRAGTFVTLADVVNEVG 423 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D VRF ML RK ++FDF KV E SK+NPVFY+QYA+AR RS R+A D D Sbjct: 424 KDVVRFTMLTRKPEAQMEFDFAKVVEASKDNPVFYLQYAHARIRSTLRKAGVEPSDAHLD 483 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + EL L+ A++PRV+E A A+EP+++AF+L DLA+ FH W+ Sbjct: 484 RLGAD-----------ELALVREAAQFPRVVEAAAKAREPHRIAFFLGDLAAAFHSFWNA 532 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G ++P R +Q ++ +LT RL + V +I +GL I+GVE+ EM Sbjct: 533 GNDDPAKRIIQEDDAELTAARLFVAAQVGQVIRNGLGILGVEAVEEM 579 >gi|254436491|ref|ZP_05049985.1| arginyl-tRNA synthetase [Octadecabacter antarcticus 307] gi|198251937|gb|EDY76251.1| arginyl-tRNA synthetase [Octadecabacter antarcticus 307] Length = 578 Score = 598 bits (1542), Expect = e-168, Method: Composition-based stats. Identities = 264/586 (45%), Positives = 371/586 (63%), Gaps = 10/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LFAD + + + L + + + + +E PRD HG ++TNAAM+L++P GL Sbjct: 1 MNLFADIRAAVIDCLNVLTNDGVLPAGLDFANVTVEPPRDATHGDMATNAAMVLAKPAGL 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + A++ D + S IAG GF+NL L ++ +++ G ++G++ +G Sbjct: 61 KPRDIAEALAAKLLADRRIMSADIAGPGFLNLALDAGVWAGVVRAVLTDG-DFGKSNLGT 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G K+N+E+VSANPTGP+HVGH R AV GD LASL+A++GY+VTREYYIND G Q++ LA Sbjct: 120 GLKINVEYVSANPTGPLHVGHTRGAVFGDALASLLAYAGYDVTREYYINDGGGQVDVLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV+ RY +A + +G YPG YL G++L K + E+ WL V+D+ Q Sbjct: 180 SVYLRYLEA-HGQAVTFEDGTYPGEYLIKAGQDLKTKVGDAYVGQGEDVWLDDVRDFGTQ 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL L ++ D+F SE + I I +L +G +Y+G L PPK K Sbjct: 239 AMMALIREDLDMLGVKMDVFYSEKSLY--GTGRIEAAIADLKSKGLIYKGTLEPPKGKLP 296 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LF+ST GDDVDRP+ KSDG++TYFA D+AY K RGFD +I V G+D Sbjct: 297 EDWE-PREQTLFKSTDFGDDVDRPIQKSDGAWTYFAPDIAYHFDKVSRGFDALIDVFGAD 355 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR++A AA+S+ +++ L +LV+LY++G P KMSKRAG FI LR +VDEVG Sbjct: 356 HGGYVKRMKAAVAALSDNAVPLDIKLTQLVKLYKNGEPFKMSKRAGTFIMLRDLVDEVGP 415 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF ML RKN LDFDF KV EQSK+NPVFYVQYA AR S+ R+A + D+ Sbjct: 416 DVTRFHMLTRKNDAPLDFDFDKVTEQSKDNPVFYVQYASARIHSVLRKAAEAGVDVG--- 472 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + +EL + LAE+PR++E A EP+++AFYLYDLAS HG W+ G Sbjct: 473 -DLAIADLSLATHPAELAMAAKLAEWPRLVEIAAKGHEPHRIAFYLYDLASELHGLWNRG 531 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ LRF+Q +N T ++ L+ AV+ +I+ GL+I+GV EM Sbjct: 532 NDDASLRFLQVDNIPATQAKIALIKAVSVVISHGLSILGVTPAEEM 577 >gi|312112663|ref|YP_003990979.1| arginyl-tRNA synthetase [Geobacillus sp. Y4.1MC1] gi|311217764|gb|ADP76368.1| arginyl-tRNA synthetase [Geobacillus sp. Y4.1MC1] Length = 556 Score = 598 bits (1541), Expect = e-168, Method: Composition-based stats. Identities = 207/587 (35%), Positives = 325/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLK-EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + R+K +K + +++ + +++E PR+ AHG STN AM L+R Sbjct: 1 MNIVEQMKERMKEEIKRAVVSAGLAKEEEVPDVILEVPREKAHGDYSTNMAMQLARIAKK 60 Query: 60 DPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IV V + IAG GFIN Y+ YL +++ I+ +G YG +G Sbjct: 61 PPRAIAEEIVKHFDQTKVSVKKIDIAGPGFINFYMDNRYLTELIPMIIEAGASYGETNVG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV +EFVSANPTG +H+GH R A VGD+L +++ +G++VTREYYINDAG QI LA Sbjct: 121 KGQKVQVEFVSANPTGDLHLGHARGAAVGDSLCNILEKAGFDVTREYYINDAGNQIYNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 SV RY QAL D ++PE Y G + +GK+LA+++ + ++ E++ L ++Y + Sbjct: 181 KSVEARYFQAL-GIDKEMPEDGYYGDDIIEIGKKLAEEHGDKYVHMDEQERLAFFREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + ++ I+ DL + D++ SE ++ I + + L +G++YE Sbjct: 240 RYELEKIKKDLADFRVTFDVWYSETSLYK--SGKIDEALAVLRERGHIYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 FRST GDD DR L+K DG+YTY D+AY + K RGF +I + G+ Sbjct: 288 ------KDGATWFRSTTFGDDKDRVLIKQDGTYTYLLPDIAYHQDKLRRGFAKIINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A AA+ + V + +LV LY++G +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMKAAIAALGYDPDVLEVEIIQLVNLYQNGERVKMSKRTGKAVTMRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ R + LDFD QS ENPV+YVQYA+AR SI RQ +++ + D Sbjct: 402 LDATRYFFAMRSSDTHLDFDMDLAVSQSNENPVYYVQYAHARVSSILRQGEELQLSYEGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L + E++L+ L E+P + A + + P+++ Y+++LAS H ++ Sbjct: 462 L------QLDYIQTEKEIELLKKLGEFPGAVSEAALKRMPHRITGYVFELASALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + N + + RL L+ AV + + L +IGV +P +M Sbjct: 516 E------KVLDPENAEKSRARLALMKAVQITLQNALALIGVSAPEKM 556 >gi|154687847|ref|YP_001423008.1| arginyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42] gi|166232756|sp|A7Z9V1|SYR_BACA2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|154353698|gb|ABS75777.1| ArgS [Bacillus amyloliquefaciens FZB42] Length = 556 Score = 597 bits (1539), Expect = e-168, Method: Composition-based stats. Identities = 211/587 (35%), Positives = 323/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + LK +K K + ++ + +++E P++ HG STN AM L+R Sbjct: 1 MNIAEQMKDVLKEEIKAAVLKAGLADESQIPSVLLETPKEKTHGDYSTNMAMQLARIAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IVA K ++ + IAG GFIN Y++ SYL K++ S++ +G YG IG Sbjct: 61 APRQIAEEIVASFDKGKASIEKMDIAGPGFINFYMNNSYLTKLIPSVLEAGEHYGETNIG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 +G K+ +EFVSANPTG +H+GH R A VGD L S+++ +GY+V+REYYINDAG QIN LA Sbjct: 121 QGEKIQVEFVSANPTGDLHLGHARGAAVGDALCSVLSKAGYDVSREYYINDAGNQINNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY +AL + +PE Y G + +GK+LA+ + ++ E + ++Y + Sbjct: 181 LSVEVRYFEAL-GLEKPMPEDGYRGEDIIAIGKKLAEDFGDRFVHEEESERQAFFREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + +R DL+ + D++ SE + + I ++ L +G+VYE Sbjct: 240 KYELDKLRSDLENFRVPFDVWYSETSLY--ENGKIDQALEALREKGHVYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRST GDD DR L+K DGSYTY D+AY K K +RGFD +I V G+ Sbjct: 288 ------EDGATWFRSTTFGDDKDRVLIKKDGSYTYLLPDIAYHKDKLDRGFDKLINVWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ KK + V + +LV LY++G +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMKAAIEALGYKKGTLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+VR+ R +DFD S ENPV+Y QYA+AR S+ RQ ++ Sbjct: 402 LDAVRYFFAMRSADTHMDFDLDLAVSTSNENPVYYAQYAHARICSMLRQGEEQG------ 455 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L P + E L+ + +P + A + P+++ Y+YDLAS H ++ Sbjct: 456 LKPAADLDFSHIQSEKEYDLLKTIGGFPEAVAEAAEKRIPHRVTNYIYDLASALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + N++ + RL L+ A +N+ L +IGV +P +M Sbjct: 516 E------KVIDPENKEKSRARLALMKATQITLNNALQLIGVSAPEKM 556 >gi|197118664|ref|YP_002139091.1| arginyl-tRNA synthetase [Geobacter bemidjiensis Bem] gi|238690877|sp|B5EEF0|SYR_GEOBB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|197088024|gb|ACH39295.1| arginyl-tRNA synthetase [Geobacter bemidjiensis Bem] Length = 554 Score = 596 bits (1537), Expect = e-168, Method: Composition-based stats. Identities = 206/584 (35%), Positives = 324/584 (55%), Gaps = 31/584 (5%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + + ++ + + I +E+P HG +TN AM +++ P Sbjct: 1 MKEQLRACILKGIEGCFADGTLTSGEVPAINVEKPAHAEHGDFATNVAMQMAKQQRKAPR 60 Query: 63 TIAELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +AE++VA++ ++S+ IAG GFIN ++ S R+ L+ I +G +G++ IG+G Sbjct: 61 AVAEILVAKLAGASDLIESLEIAGPGFINFFIKDSAWRRTLTEIDRAGDAWGKSGIGRGK 120 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 KV +EFVSANPTGP+H+GH R A GD +ASL++ +G++V REYYINDAG Q+NTL LS Sbjct: 121 KVQVEFVSANPTGPLHIGHGRGAATGDAVASLLSAAGFDVQREYYINDAGNQMNTLGLSG 180 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 RY++ L D PE Y G Y+K + ++ KY L +E + + Sbjct: 181 LLRYKELL-GEKIDFPETCYQGDYMKDIARDAVTKYGDRFLKVSQEDGVAFFSKMGGDLI 239 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 + I DL+ I+ D + SE D ++ I+ + +G +YE Sbjct: 240 LAGIDQDLQDFGIRFDHWFSEQSLF--DEGKVKSAIEEMQAKGLIYE------------- 284 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 L FR+T GDD DR +++S+G TYFA+D+AY + K+ RGFD +I V G+DH Sbjct: 285 ---QEGALWFRTTDYGDDKDRVVVRSNGVTTYFASDIAYHRDKFARGFDWVIDVWGADHH 341 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 GYV RL++V + + + ++L +LV L RDG+P+ MS R+G+F+TL+ VVDEVG D+ Sbjct: 342 GYVPRLKSVVQGLGRDASDLGIILVQLVSLLRDGVPVAMSTRSGEFVTLKEVVDEVGRDA 401 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 RF L R++ LDFD K QS +NPV+YVQYA+AR +SIF A++ + FD Sbjct: 402 ARFFFLMRRSDSQLDFDLELAKRQSNDNPVYYVQYAHARIKSIFDTARERGVEPRFDSVK 461 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 ++ +L L+ L+ YP ++E + EP+++ +YL +LA FH ++ R Sbjct: 462 LELLQT-----PEDLSLVKKLSVYPEILEGGAVNFEPHRITYYLQELAGEFHSFYNKSR- 515 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +LT RL L+H VA + + L ++G+ +P M Sbjct: 516 -----VITPEEPELTQARLFLLHCVAITLKNALTVLGISAPERM 554 >gi|253577362|ref|ZP_04854679.1| arginyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] gi|251843262|gb|EES71293.1| arginyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14] Length = 559 Score = 596 bits (1537), Expect = e-168, Method: Composition-based stats. Identities = 210/586 (35%), Positives = 314/586 (53%), Gaps = 32/586 (5%) Query: 2 YLFADFSSRLKNY-LKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 + LK L I +++ + IV+E P+D AHG +TNAAM LSR + Sbjct: 4 NPLEQMNQALKEAILDAIVSAGLAQREEIPAIVLEVPKDKAHGDFATNAAMQLSRIAKKN 63 Query: 61 PLTIAELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE I+ ++ ++ +AG GFIN LS SYL IL + G YGR +G Sbjct: 64 PRQIAEEILGQLDYGKAGIEKAEVAGPGFINFTLSKSYLYPILLQVYREGENYGRTTLGN 123 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KV +EFVSANPTG +H+GH R A VGD L +++ F GY+VTREYYINDAG QI L Sbjct: 124 GKKVQVEFVSANPTGSLHLGHARGAAVGDALCNVLDFVGYDVTREYYINDAGNQIVNLIK 183 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ RY+Q L D ++PE Y G +K KEL + +LL PEE+ ++ + ++ Sbjct: 184 SIEARYRQEL-GQDVEMPEDGYHGEDIKGFAKELVAEQGDKLLGMPEEERTAFLRKFGLE 242 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 + I+ DL+ ++ D++ SE ++ + + L +G YE Sbjct: 243 KELSKIQRDLERFRVRFDVWFSETSLYQ--DGQVEASLSELREKGQTYE----------- 289 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 ++T GDD DR L+K+DG+YTY D+AY + KY+RGFD +I + G+D Sbjct: 290 -----QDGATWLKTTAYGDDKDRVLVKNDGTYTYLTPDIAYHRNKYDRGFDRIINIWGAD 344 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ R++A A+ + ++ VL+ ++V L++DG +KMSKR G +T+ ++DEVG Sbjct: 345 HHGYIPRVKAAMQAIGKDPEKLTVLIAQMVSLFQDGEKVKMSKRTGKAVTMVDLMDEVGV 404 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D +R+ R LDFD S ENPV+YVQYA+AR SIFRQA++ + Sbjct: 405 DPIRYFFTMRSMDSHLDFDMDLAISTSNENPVYYVQYAHARICSIFRQAEEQGIQIP--- 461 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + E L+ L E P I A P++L Y+Y+LA++FH ++ Sbjct: 462 -AAENVNLSKLTAEHEYDLLRKLGELPEEINVAAENYAPHRLVRYVYELAALFHSYYRAE 520 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R V + + RL L+ V +++ + L +IGV +P +M Sbjct: 521 R-------VITEDAEQAAARLVLLGGVRTVLANVLRLIGVSAPEKM 559 >gi|295697794|ref|YP_003591032.1| arginyl-tRNA synthetase [Bacillus tusciae DSM 2912] gi|295413396|gb|ADG07888.1| arginyl-tRNA synthetase [Bacillus tusciae DSM 2912] Length = 557 Score = 596 bits (1537), Expect = e-168, Method: Composition-based stats. Identities = 219/587 (37%), Positives = 322/587 (54%), Gaps = 32/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + RL+ L + + + DR+ +E PRD HG S+NAAM L++ + Sbjct: 1 MSTLLNVQERLRRELAAAAGRCGLSVE-ADRVHLEVPRDKRHGDYSSNAAMQLAKEVRRP 59 Query: 61 PLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +A+ + + V+ V +AG GF+N YL YL IL ++ YGR + + Sbjct: 60 PRALAQQLAETLDCRAAGVERVEVAGPGFLNFYLDTGYLDDILREVLKEKGAYGRRAVPR 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G++V +EFVSANPTG +H+GH R A GD L ++ + GYEV REYYINDAG Q++ LA+ Sbjct: 120 GSRVQVEFVSANPTGRLHIGHARGAAYGDALCRILEWDGYEVQREYYINDAGNQVHNLAI 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ RY QAL D +P+ Y G + + + L + EEK +K ++ Sbjct: 180 SLEARYFQAL-GRDVPMPDDGYYGRDVVELAERLVREEGDRYAQMSEEKRYEALKQKGLE 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AM++ IRDDL ++ D + SE + + + + ++ L R+G+VYE Sbjct: 239 AMLQQIRDDLTRFRVRFDRWFSERALY--ESGAVEETVEELRRRGWVYEA---------- 286 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 L FRST GDD DR L+KSDGSYTY D+AY + K ERGFD +I V G D Sbjct: 287 ------DGALWFRSTAFGDDKDRVLIKSDGSYTYLTPDIAYHRDKLERGFDRLIDVWGQD 340 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYV R++A AA+ ++ V LC+LV LYR+G P++MSKR G+ +T+ ++DEVG Sbjct: 341 HHGYVGRMKAAVAALGGDPERLVVRLCQLVALYRNGEPVRMSKRTGNAVTMAELMDEVGV 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF-PDLDFD 478 D+ R+ +L R N +DFD QS +NPV+YVQYA+AR SI RQA + PD+D Sbjct: 401 DAARYFLLRRSNDSHIDFDLDLAVSQSNDNPVYYVQYAHARICSILRQASERGYPDVDQA 460 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 N+ E E+ L+ L +P +E+A A P+ + YL +LA FH ++ Sbjct: 461 AESANLRVLRREP---EVDLLKWLGNFPTEVESAAAAYAPHHIVHYLEELAKRFHSFYTS 517 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R V ++ + RL LV V + GL+++GV +P +M Sbjct: 518 CR-------VLGEAPEIEVARLALVRGVQWTLRVGLDLLGVAAPEQM 557 >gi|253700562|ref|YP_003021751.1| arginyl-tRNA synthetase [Geobacter sp. M21] gi|259511647|sp|C6E805|SYR_GEOSM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|251775412|gb|ACT17993.1| arginyl-tRNA synthetase [Geobacter sp. M21] Length = 554 Score = 596 bits (1536), Expect = e-168, Method: Composition-based stats. Identities = 205/584 (35%), Positives = 323/584 (55%), Gaps = 31/584 (5%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + + ++ + + I +E+P HG +TN AM +++ P Sbjct: 1 MKEQLRACILKGIEGCFADGTLTSGEVPAINVEKPAHAEHGDFATNVAMQMAKQQRKAPR 60 Query: 63 TIAELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +AE++VA++ ++S+ IAG GFIN ++ R+ LS I +G +G++ IG+G Sbjct: 61 AVAEILVAKLAGASDLIESLEIAGPGFINFFIKDGAWRRTLSEIDRAGDAWGKSGIGRGK 120 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 KV +EFVSANPTGP+H+GH R A GD +ASL++ +G++V REYYINDAG Q+NTL LS Sbjct: 121 KVQVEFVSANPTGPLHIGHGRGAATGDAVASLLSAAGFDVQREYYINDAGNQMNTLGLSG 180 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 RY++ L + PE Y G Y+K + ++ KY L +E+ + + Sbjct: 181 LLRYKELL-GEKIEFPETCYQGDYMKDIARDAVTKYGDRFLKVSQEEGVAFFSKMGGDLI 239 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 + I DL+ ++ D + SE D + I+ + +G +YE Sbjct: 240 LAGIDQDLQDFGVRFDHWFSEQSLF--DEGKVNSAIEEMQAKGLIYE------------- 284 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 L FR+T GDD DR +++S+G TYFA+D+AY + K+ RGFD +I V G+DH Sbjct: 285 ---QEGALWFRTTDYGDDKDRVVVRSNGVTTYFASDIAYHRDKFARGFDWVIDVWGADHH 341 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 GYV RL++V + + + ++L +LV L RDG+P+ MS R+G+F+TL+ VVDEVG D+ Sbjct: 342 GYVPRLKSVVQGLGRDASDLGIILVQLVSLLRDGVPVAMSTRSGEFVTLKEVVDEVGRDA 401 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 RF L R++ LDFD K QS +NPV+YVQYA+AR +SIF A++ + FD Sbjct: 402 ARFFFLMRRSDSQLDFDLELAKRQSNDNPVYYVQYAHARIKSIFDTARERGVEPLFDSVK 461 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 ++ +L LI L+ YP ++E + EP+++ +YL +LA FH ++ R Sbjct: 462 FELLQT-----PEDLSLIKKLSVYPEILEGGAVNFEPHRITYYLQELAGEFHSFYNKSR- 515 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +LT RL L+H VA + + L ++G+ +P M Sbjct: 516 -----VITPEEPELTQARLFLLHCVAITLKNALTVLGISAPERM 554 >gi|157694133|ref|YP_001488595.1| arginyl-tRNA synthetase [Bacillus pumilus SAFR-032] gi|166980180|sp|A8FIG8|SYR_BACP2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|157682891|gb|ABV64035.1| arginine--tRNA ligase [Bacillus pumilus SAFR-032] Length = 557 Score = 595 bits (1534), Expect = e-168, Method: Composition-based stats. Identities = 203/587 (34%), Positives = 324/587 (55%), Gaps = 32/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + LK + K + ++ + +++E P+D HG STN AM L+R Sbjct: 1 MNIAEQVKDALKEEIIAAVVKAGLADESQVPDVLLEVPKDKTHGDYSTNMAMQLARIAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IV K ++ + IAG GFIN Y++ YL K++ +++ + YG G Sbjct: 61 APRQIAEDIVKAFDKGKASIEKMDIAGPGFINFYMNNQYLTKLIPAVLEAKEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G KV +EFVSANPTG +H+GH R A VGD+L +++ +G++V+REYYINDAG QIN LA Sbjct: 121 GGQKVQVEFVSANPTGDLHLGHARGAAVGDSLCNILDKAGFDVSREYYINDAGNQINNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY +AL + ++PE Y G +K +G++LAD++ ++ EE+ + ++Y + Sbjct: 181 LSVEVRYFEAL-GLEKEMPEDGYRGEDIKGIGQKLADEFGDRFVHESEEERMKFFREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + ++ +R DL+ + D++ SE + + I ++ L +GYV+E Sbjct: 240 KYELEKLRVDLENFRVPFDVWYSETSLY--ENGKIEPALETLREKGYVFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + RST GDD DR L+K DGS+TY D+AY K K +RGFD +I + G+ Sbjct: 288 ------EDGATWLRSTDFGDDKDRVLIKKDGSFTYLLPDIAYHKDKLDRGFDQLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ ++ V + +LV LY++G +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYPAGKLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ R + +DFD S ENPV+Y QYA+AR S+ RQ ++ + + + Sbjct: 402 LDATRYFFAMRSAATHMDFDLDLAISTSNENPVYYAQYAHARICSMLRQGEEKGYEPNLE 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + I E E+D L+ + +P V+ A + P+++ Y+YDLAS H ++ Sbjct: 462 KADFSHIQSEKEYD-----LLKIIGGFPEVVAEAAEKRIPHRVTNYIYDLASALHSFYNA 516 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + N T RL L+ A + + L +IGV +P +M Sbjct: 517 E------KVIDVENETKTTARLSLMKATQITLANALKLIGVSAPEKM 557 >gi|258543179|ref|YP_003188612.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01] gi|256634257|dbj|BAI00233.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01] gi|256637317|dbj|BAI03286.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03] gi|256640369|dbj|BAI06331.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07] gi|256643426|dbj|BAI09381.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22] gi|256646481|dbj|BAI12429.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26] gi|256649534|dbj|BAI15475.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32] gi|256652520|dbj|BAI18454.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655578|dbj|BAI21505.1| arginyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12] Length = 599 Score = 594 bits (1533), Expect = e-168, Method: Composition-based stats. Identities = 270/599 (45%), Positives = 375/599 (62%), Gaps = 21/599 (3%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 +F + + ++E+ V ++ L R+ + RD AHG ++TNAA++L++ P Sbjct: 5 VFQRYRQHVLAIVQELLP--NVPEETLARVELTPTRDPAHGDMATNAALLLAKVARRKPA 62 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 IA +V ++ V SV AG GF+N+ L P +R IL +++ +G YG + GKG + Sbjct: 63 DIAADLVTALQKVEGVASVAAAGPGFVNITLKPDVMRGILPAVLNAGEAYGASQAGKGLR 122 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VN+E+VSANPTGPMHVGHCR AVVGD LA+LMA +G+ VT+E+YINDAGAQ+ LA + + Sbjct: 123 VNVEYVSANPTGPMHVGHCRGAVVGDALANLMAKAGFAVTKEFYINDAGAQVRALAWAAY 182 Query: 183 WRYQQAL-----YNNDSDLPEGY--YPGVYLKHVGKELADKYSSELLN---------FPE 226 WRY QAL ++ S L G Y G YL VG ELA +Y ++L PE Sbjct: 183 WRYLQALGTKMTQDDFSALAPGGLQYQGEYLIPVGMELAAEYGNKLTETDADGSPLPAPE 242 Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286 WL V+ ++V M+ I++DL AL + HD+F SE + R I L +QG + Sbjct: 243 VTWLETVRGFAVTHMLTAIKEDLAALGVHHDVFTSEAEVLR--RGVTDAAISKLEQQGLL 300 Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346 YEG+L PPK K + + +R+QLLFRST GDDVDRPL KSDG+ TYFA D+ Y K Sbjct: 301 YEGVLEPPKGKLPEDWE-EREQLLFRSTQFGDDVDRPLRKSDGTNTYFANDIGYHADKVA 359 Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406 RG MI V G+DH GYVKR++A A++ + V+LC++V + RDG P+KMSKRAG Sbjct: 360 RGAQMMIDVWGADHGGYVKRMKAAVKAITGDTVPLEVVLCQIVHILRDGQPVKMSKRAGT 419 Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466 F+TLR ++DEVG D+VRF ML RK+ ++FD V Q ++NPVFYVQYA+ARCRS+ R Sbjct: 420 FVTLRDLIDEVGRDAVRFTMLTRKSDAQMEFDLDLVVAQQRDNPVFYVQYAHARCRSVLR 479 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 A + + D ES +E+ LI LAE+PR++E A +A+EP+++AFYL Sbjct: 480 AAAEAAAYGETDDAALASASLESLTSDAEMALIRRLAEWPRMVEAAALAREPHRVAFYLA 539 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 D+A FH W+ GR++ LRF+Q + + T RL LV A A +I SGL ++GVE EM Sbjct: 540 DVAGDFHALWNRGRDDASLRFLQPDAVEATRARLALVAATAVVIRSGLAVMGVEPVEEM 598 >gi|194016224|ref|ZP_03054838.1| arginyl-tRNA synthetase [Bacillus pumilus ATCC 7061] gi|194011697|gb|EDW21265.1| arginyl-tRNA synthetase [Bacillus pumilus ATCC 7061] Length = 557 Score = 594 bits (1533), Expect = e-167, Method: Composition-based stats. Identities = 205/587 (34%), Positives = 326/587 (55%), Gaps = 32/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + LK + K + ++ + +++E P+D HG STN AM L+R Sbjct: 1 MNIAEQVKDALKEEIIAAVVKAGLADESQVPDVLLEVPKDKTHGDYSTNMAMQLARIAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IV K ++ + IAG GFIN+Y++ YL K++ +++ + YG G Sbjct: 61 APRQIAEDIVKAFDKGKASIEKLDIAGPGFINIYMNNQYLTKLIPAVLEAKEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G KV +EFVSANPTG +H+GH R A VGD+L +++ +G+EV+REYYINDAG QIN LA Sbjct: 121 GGQKVQVEFVSANPTGDLHLGHARGAAVGDSLCNILDKAGFEVSREYYINDAGNQINNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY +AL + ++PE Y G +K +G++LAD++ ++ PEE+ + ++Y + Sbjct: 181 LSVEVRYFEAL-GLEKEMPEDGYRGEDIKGIGQKLADEFGDRFVHEPEEERMKFFREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + ++ +R DL+ + D++ SE + + I ++ L +GYV+E Sbjct: 240 KYELEKLRVDLENFRVPFDVWYSETSLY--ENGKIEPALETLRAKGYVFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + RST GDD DR L+K DGS+TY D+AY K K +RGFD +I + G+ Sbjct: 288 ------EDGATWLRSTDFGDDKDRVLIKKDGSFTYLLPDIAYHKDKLDRGFDQLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ ++ V + +LV LY++G +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYPAGKLEVEIIQLVHLYKNGEKMKMSKRTGKAVTMRDLIEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ R + +DFD S ENPV+Y QYA+AR S+ RQ ++ + + + Sbjct: 402 LDATRYFFAMRSAATHMDFDLDLAISTSNENPVYYAQYAHARICSMLRQGEEKGYEPNLE 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + I E E+D L+ + +P V+ A + P+++ Y+YDLAS H ++ Sbjct: 462 KADFSHIQSEKEYD-----LLKIIGSFPEVVAEAAEKRIPHRVTNYIYDLASALHSFYNA 516 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + N T RL L+ A + + L +IGV +P +M Sbjct: 517 E------KVIDVENETKTTARLSLMKATQITLANALKLIGVSAPEKM 557 >gi|332187136|ref|ZP_08388876.1| arginyl-tRNA synthetase [Sphingomonas sp. S17] gi|332012836|gb|EGI54901.1| arginyl-tRNA synthetase [Sphingomonas sp. S17] Length = 574 Score = 593 bits (1530), Expect = e-167, Method: Composition-based stats. Identities = 257/587 (43%), Positives = 375/587 (63%), Gaps = 16/587 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGL 59 M L+ F++ + L + + + R + +E PRD +HG L+TNAAM+L++P G Sbjct: 1 MTLYTRFAAHIDAALDTLVAAGTLPGGLDRRNVTVELPRDASHGDLATNAAMVLAKPAGT 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +AE I + +V+SV +AG GF+N+ L+ + R L++I +G +YGR+ G+ Sbjct: 61 NPRALAEAIAVELGKLDEVESVSVAGPGFLNMRLTKAAWRDELAAIPQAGGDYGRSARGE 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G VNIE+VSANPTGPMH+GHCR AVVGD LA+L+ F+G++V REYY+NDAG Q++ LA Sbjct: 121 GVTVNIEYVSANPTGPMHMGHCRGAVVGDALATLLEFAGHKVIREYYVNDAGGQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S RY++AL ++PEG YPG YLK VG+ LA ++ + ++ PE +WL + + +V Sbjct: 181 SAHLRYREAL-GETIEIPEGLYPGEYLKPVGEALAAEFGNAYVDAPESEWLVLFRTRAVA 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL L I HD+F SE + L +G VY+G+L PK +T Sbjct: 240 AMMAMIREDLALLGIHHDLFSSEAELQA--AGKPEAAEAELRSRGLVYDGVLEAPKGETP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + L FRS+ GDD DRP+ KS+G++TYF ADLAY K + D +I + G+D Sbjct: 298 EDWEPVELPL-FRSSQFGDDQDRPIKKSNGAWTYFGADLAYHYQKAQT-ADQLIDIWGAD 355 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H+G VKR+ A A++ K + +V L ++VRL R G P+KMSKRAG+F+TL VV EVG Sbjct: 356 HAGTVKRIVAAVEALTGGKTKFDVKLVQMVRLLRGGEPVKMSKRAGNFVTLADVVREVGK 415 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFD 478 D VRF ML R++ +DFDF KV E SK+NPVFYVQYA+AR S+ R+A + + D D Sbjct: 416 DVVRFTMLTRRSDAQMDFDFAKVVEASKDNPVFYVQYAHARIASLKRRAAEAGIEGGDAD 475 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L S D ++ L+ A++PR++E A +A+EP+++AFYLYDLA+ FH W+ Sbjct: 476 L---------SLLDAEDIALVKLAAQFPRIVETAAVAREPHRIAFYLYDLAAAFHAAWNV 526 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G + P RF+ A + +T RL L + +I +GL ++GVE+ +EM Sbjct: 527 GNDRPDRRFLIAEDAAVTRARLFLSEGIGQVIRNGLALMGVEAVSEM 573 >gi|95930475|ref|ZP_01313211.1| arginyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684] gi|95133515|gb|EAT15178.1| arginyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684] Length = 554 Score = 593 bits (1528), Expect = e-167, Method: Composition-based stats. Identities = 221/584 (37%), Positives = 327/584 (55%), Gaps = 31/584 (5%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + L++ + + IE P HG + NAAM+++R P Sbjct: 1 MKTRLKEAVALALRQCFDAETLISNEIPDFAIEVPNRSDHGDFAVNAAMLMARTEKKAPR 60 Query: 63 TIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 IAE++VA++K D V IAG GFIN +LS S + L I G +G+ +G G Sbjct: 61 QIAEILVAQLKEQQGLWDRVEIAGPGFINFFLSASCWHEALKQIYAQGAGFGKCDVGAGK 120 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 +V +EFVSANPTGP+H+GH R A GD +AS++ +G+EV REYYINDAG Q++TL S+ Sbjct: 121 RVQVEFVSANPTGPLHIGHGRGAATGDAVASVLQEAGFEVQREYYINDAGNQMDTLGRSI 180 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 + RY Q L + D PE Y G Y++ +++ D L+ E + +A+ Sbjct: 181 YLRYCQ-LQGQEVDFPEDCYQGDYIRDYAQQVLDGEGRRFLDMEEADAIAWFSREGGEAI 239 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 + I DL+ I+ D + SE + D ++ ID L R GY YE Sbjct: 240 RQGIDADLQQFGIRFDNWYSEQTLY--DRDLVKQGIDALTRDGYTYE------------- 284 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 + FR+T GDD DR L++S+G+ TYFA+D+AY + KY+RGFD +I V G+DH Sbjct: 285 ---QDGAIWFRTTDFGDDKDRVLIRSNGATTYFASDVAYHREKYQRGFDIVIDVWGADHH 341 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 GYV R++AV AA+ + ++L +LV L R+G I MS RAG F+TL+ VVDEVG D+ Sbjct: 342 GYVPRMKAVLAALGRNPEDLQIILVQLVNLLREGEQIAMSTRAGKFVTLKEVVDEVGRDA 401 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 RF L R++ LDFD K+QS ENPV+YVQYA+AR SI R A++ L Sbjct: 402 CRFFFLMRRSDSQLDFDLELAKKQSTENPVYYVQYAHARVCSINRNAEESG----VALLG 457 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + + E+ ELQL ++ YP V+ +A + EP+K+ FYL +LA+ FH +++ R Sbjct: 458 GDEVKLEALTLPEELQLTKMMSRYPEVVASAALNYEPHKITFYLQELAAQFHSYYNQHR- 516 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V ++ ++ RL LV+AV +++S L ++GV +P +M Sbjct: 517 ------VIVDDVDVSQARLYLVNAVKQVVSSALTVLGVSAPEKM 554 >gi|5834360|gb|AAD53926.1|AF179611_10 arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4] Length = 580 Score = 593 bits (1528), Expect = e-167, Method: Composition-based stats. Identities = 264/580 (45%), Positives = 363/580 (62%), Gaps = 12/580 (2%) Query: 7 FSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 F L + L + + + + R+ +E PRD +HG L+ NAAM+L++ P +A Sbjct: 12 FCRALSSILDTFEAEGLLPAGLDRSRVAVEPPRDPSHGDLAINAAMVLAKAAKTAPRALA 71 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 E +V + V+SV IAG GFIN+ L+ RK L+ I+ G +YGR+ IG+ +VN+ Sbjct: 72 EKLVESLSQLEGVESVEIAGPGFINIRLTDDCWRKELTHILEQGQDYGRSDIGQNLRVNV 131 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 E+VSANPTGPMH+GHCR AVVGD LASL+ F+GY+VTREYY+NDAG Q+ TLA S + RY Sbjct: 132 EYVSANPTGPMHMGHCRGAVVGDALASLLDFAGYKVTREYYVNDAGQQVQTLARSAYMRY 191 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245 ++AL + +PEG YPG YL VGK LA+KY LN PE +WL + ++ +V AMM +I Sbjct: 192 REAL-GEEITIPEGLYPGDYLVPVGKLLAEKYGDRYLNAPESEWLALFRETTVAAMMDMI 250 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 RDDL L I HD F SE H+ ++ ID L ++G +Y+G+L PK +T + Sbjct: 251 RDDLALLGIHHDKFTSEAALHK--AGIVQKAIDKLEKEGLIYKGVLEAPKGETPEDLVTC 308 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365 R L+ R+T DD DRP+ SDGSYTYF ADLAY K D ++ + G+DH+G VK Sbjct: 309 RTDLVSRATKFSDDSDRPVQISDGSYTYFGADLAYHARKAAT-ADQLVDIWGADHAGTVK 367 Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425 R++A AA+++ K ++V L ++V L R G P+KMSKR +F+TL VV EVG D VRF Sbjct: 368 RIKAAVAALTQNKVPLDVKLVQMVHLLRGGEPVKMSKRFRNFVTLADVVSEVGRDVVRFS 427 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 ML RK +DFDF KV E SK+NPVFYVQYA+AR S+ R+ L + Sbjct: 428 MLTRKADAQMDFDFEKVIEASKDNPVFYVQYAHARVHSLHRR-------LVSENITLPEK 480 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 + D EL LI A++PR+IE A +A EP+++ FYL+ LA+ FH W+ G +NP Sbjct: 481 ADLNLLDKEELALIQQAAQFPRLIEAAAVAHEPHRIVFYLFTLAADFHSLWNKGNDNPDR 540 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 RF+ +N T RL L AV +I +GL ++GV + EM Sbjct: 541 RFLLPDNPAKTAARLALADAVGQVIRNGLGVVGVNASEEM 580 >gi|317130799|ref|YP_004097081.1| arginyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522] gi|315475747|gb|ADU32350.1| arginyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522] Length = 555 Score = 593 bits (1528), Expect = e-167, Method: Composition-based stats. Identities = 211/587 (35%), Positives = 328/587 (55%), Gaps = 34/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LK+ + K ++ + + +VIE P++ HG +TN AM L+R Sbjct: 1 MSQVEQLKETLKSEIIAAVIKAQLATTENIPGVVIESPKEKEHGDYATNMAMQLARIAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IA+ IVA K V+ + IAG GFIN ++ YL +I+S+++ G +G+ +G Sbjct: 61 APRMIADDIVANFNKEAASVEKIEIAGPGFINFFMKKDYLSEIVSTVLKQGNAFGKVNVG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 +G ++ +EFVSANPTG +H+GH R A VGD+L +++ +GY+V REYYINDAG QI LA Sbjct: 121 EGKRLQVEFVSANPTGTLHLGHARGAAVGDSLCNILEKAGYDVAREYYINDAGNQIENLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 S+ RY QAL D +PE Y G + KE+AD Y ++ E++ L ++Y + Sbjct: 181 RSIDARYLQAL-GKDVPMPEDGYHGQDIIGFAKEIADTYGDRFIDAEEKERLAFFREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + +++DL + D + SE + + + D++ L +G YE Sbjct: 240 KRELDKLKEDLADFRVNFDHWYSETSLYTTE--KVTDVLTELKNRGETYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + + FRST GDD DR L+KSDGSYTY D++Y K K+ RGF+ +I + G+ Sbjct: 288 ------EDGAVWFRSTTYGDDKDRVLVKSDGSYTYLTPDISYHKDKFARGFEELINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ +K Q++V + ++V L+ +G +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYEKEQLSVQIIQMVNLFENGEKVKMSKRTGKAVTMRDLMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ R LDFD K QS ENPV+YVQYA+AR S+ RQA+D+ ++D Sbjct: 402 IDATRYFFAMRAADTHLDFDMSLAKSQSTENPVYYVQYAHARICSMLRQARDLGYEVD-- 459 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 E EL L+ L EYP + +A + P+++A Y+YDLA H ++ Sbjct: 460 ----PHAQFERLTAEKELDLMKKLGEYPEAVADAAKKRAPHRMANYVYDLAQTLHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V + +LT RL L+ AV + + L ++GVE+P +M Sbjct: 516 EK-------VINEDSELTKARLGLMEAVRATLQDALKLVGVEAPEKM 555 >gi|309390229|gb|ADO78109.1| arginyl-tRNA synthetase [Halanaerobium praevalens DSM 2228] Length = 553 Score = 592 bits (1526), Expect = e-167, Method: Composition-based stats. Identities = 225/581 (38%), Positives = 332/581 (57%), Gaps = 38/581 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 A+ S L +K+ ++ + + + IE PR+ HG +TN AM+L+ G++P I Sbjct: 11 AELVSFLVESVKKAIFAGDLDLEKVPEVSIEVPREKEHGDYATNLAMVLAGKAGMNPRKI 70 Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 AE+IVA + V+S IAG GFIN L+ ++L L I G +YG+ GKG V Sbjct: 71 AEIIVANFE-SEIVESTNIAGPGFINFKLNNAWLWNNLKLITERGADYGKIDAGKGKSVQ 129 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGP+HVGH R AVVGD AS+M +GY+V REYYINDAG Q++ LA S R Sbjct: 130 VEFVSANPTGPLHVGHSRGAVVGDVTASIMETAGYDVEREYYINDAGNQMDILAESTLLR 189 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 Y++ L + ++PE Y G Y+K + +EL +Y ++L+ E K L I ++Y+ Q M+K Sbjct: 190 YREIL-GEEIEMPEDVYAGDYIKEIAQELYAEYGADLIEKEESKKLEICREYAYQKMLKN 248 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 I DL I+ D + SE H P I I+ L +GY++E Sbjct: 249 IEADLGEFGIEFDNWFSERSLH---PDKIEAAIEILKEKGYIFE---------------- 289 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 + L F++T GDD DR ++KSDGS TY AAD+AY K ERGFD +I V G+DH GY+ Sbjct: 290 EEDALWFKATDFGDDKDRVIIKSDGSPTYLAADMAYHLDKLERGFDKLINVWGADHHGYI 349 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 R+ AV A K ++ V++ ++V L R+G + MSKRAG F+T+ V EVG D+ R+ Sbjct: 350 PRVRAVIEAFGHKPDKLEVIVVQMVTLLRNGKKMPMSKRAGSFVTMNEVNKEVGIDAARY 409 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 + R LDFD KE+S NPV+YVQYA+AR SI ++ + DL Sbjct: 410 YYVMRSTDSHLDFDLELAKEESTNNPVYYVQYAHARIHSIIDNSELEAKAENLDLLT--- 466 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 SE+ L+ LA++P I+ + +++P+ L Y YDLA+ FH +++ R Sbjct: 467 -------HESEIALMKMLAKFPEEIKMSAESRQPHHLTTYAYDLATEFHSFYNNCR---- 515 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V ++++L RL LV+A ++ + L ++G+ +P +M Sbjct: 516 ---VNTDSKELAEARLYLVNAARQVLKNVLTVLGISAPEQM 553 >gi|327441472|dbj|BAK17837.1| arginyl-tRNA synthetase [Solibacillus silvestris StLB046] Length = 555 Score = 591 bits (1523), Expect = e-166, Method: Composition-based stats. Identities = 201/587 (34%), Positives = 331/587 (56%), Gaps = 34/587 (5%) Query: 1 MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K LK ID VE I +E P+D A+G +TN AM L++ Sbjct: 1 MNAVEQLQQSIKAALKAAIDQAGLVEAGTEINIHLETPKDKANGDFATNIAMQLTKLAKK 60 Query: 60 DPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE I+A + + D++ + IAG GF+N+ + +L ++++ G YGR+ G Sbjct: 61 PPRAIAEAILAHLTTEGTDIEKIEIAGPGFMNITVRKDFLASVVTATFEQGENYGRSTAG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G KV +EFVSANPTG +H+GH R A VGD+L +++ F+G++V+REYYINDAG QIN LA Sbjct: 121 AGEKVQVEFVSANPTGDLHLGHARGASVGDSLCNVLDFAGFDVSREYYINDAGNQINNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 S+ RY+QAL ++++PE Y G + + +LA++Y + +L+ +E+ +++ + Sbjct: 181 YSLEARYKQAL-GMEAEMPEDGYHGPDIIGIAGKLAEEYGATILDKSDEERFKFFREHGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + +++DLK ++ D++ SE + + I +D L G+V++ Sbjct: 240 KLELAKLQNDLKNFRVEFDVWYSETSLY--ENGKIDVALDKLKANGHVFD---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRST GDD DR L+K+DGSYTY D+AY + K RGFD +I + G+ Sbjct: 288 ------EDGATWFRSTTFGDDKDRVLIKNDGSYTYLTPDIAYHEDKLRRGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ + + V + ++V+LY++G KMSKR G+ +T+R +V+EVG Sbjct: 342 DHHGYIPRMKAAIEALGYDRGTLEVDIIQMVQLYKNGEKFKMSKRTGNAVTMRELVEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+VR+ + +DFD QS ENPV+Y QYA+AR SI R A + + + Sbjct: 402 LDAVRYFFVKTAGDSHMDFDLDLAVSQSNENPVYYAQYAHARISSILRAANEQGFEASLE 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 V E ++ + +P+++ +A + P+++A Y+ DLA+ FH ++ Sbjct: 462 NLNLLVA-------EKEEDVLKKVGAFPQIVADAAKHRTPHRIANYIQDLAAAFHSFYNA 514 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N++LT RL L+ AV + + + L +IGV +P +M Sbjct: 515 E------KVLNQDNKELTEARLALITAVKTTLANALKLIGVSAPEKM 555 >gi|299821825|ref|ZP_07053713.1| arginine--tRNA ligase [Listeria grayi DSM 20601] gi|299817490|gb|EFI84726.1| arginine--tRNA ligase [Listeria grayi DSM 20601] Length = 556 Score = 591 bits (1523), Expect = e-166, Method: Composition-based stats. Identities = 204/587 (34%), Positives = 319/587 (54%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEI-DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + +L +K + + + + I++E P++ HG STN AM L+R Sbjct: 1 MNVIQKSQKQLIEQIKAATVAALGLSESEIPDILLEVPKEKQHGDYSTNIAMQLARVAKK 60 Query: 60 DPLTIAELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE I+ I D + + +AG GFIN ++ +YL +++ I+ +G YG + G Sbjct: 61 APKQIAEAIIKEIDTEDSLIRKIDVAGPGFINFFVDNAYLTELVPVILEAGDSYGESDFG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG K+ +EFVSANPTG +H+GH R A +GD+LA++++ +G++V+REYYINDAG QIN L Sbjct: 121 KGQKIQLEFVSANPTGDLHLGHARGAAIGDSLANILSTAGFDVSREYYINDAGNQINNLV 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LS RY +A D PE Y GV +K +G +L +KY + + E++ + + ++ Sbjct: 181 LSAEARYFEAC-GIDKPFPEDGYHGVDIKELGNKLFEKYGDKYIEAEEQERRDVFRTEAL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 +R DL+A + D + SE + + I ++ L + GYVYE Sbjct: 240 AFETAKLRTDLEAFRVGFDNWFSESSLYAEN--KILPTLEVLRKNGYVYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 R+T GDD DR L+K+DGSYTYF D+AY K ERGFD +I + G+ Sbjct: 288 ------QDGATWLRTTDFGDDKDRVLIKTDGSYTYFLPDIAYHLNKLERGFDILIDIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R+ A+ Q+ V + +LV LY +G +KMSKR G +T+R +V+EVG Sbjct: 342 DHHGYIPRMRGAIEALGYAPTQLEVEIIQLVHLYENGEQVKMSKRTGKSVTMRDLVEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+VR+ R + ++FD K S ENPV+YVQYA+AR SI R ++ + D Sbjct: 402 LDAVRYFFAMRSSDTHMNFDLGLAKATSNENPVYYVQYAHARISSILRSGEEQGIVVS-D 460 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 +++ E+E D L+ L E+ V+ A + P+++ YL DLAS FH ++ Sbjct: 461 GLDVSLLQTETEID-----LLKVLGEFSDVVAEAAAKRAPHRIVRYLNDLASAFHRFYNT 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + ++ RL L+ A + +GL ++GV +P +M Sbjct: 516 N------KVLNPDEADISKARLALIKAAQVTLRNGLKLLGVSAPEKM 556 >gi|251794170|ref|YP_003008901.1| arginyl-tRNA synthetase [Paenibacillus sp. JDR-2] gi|247541796|gb|ACS98814.1| arginyl-tRNA synthetase [Paenibacillus sp. JDR-2] Length = 559 Score = 590 bits (1522), Expect = e-166, Method: Composition-based stats. Identities = 211/586 (36%), Positives = 320/586 (54%), Gaps = 32/586 (5%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEK-KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 + ++K + + + + L V+E P+D AHG L+TNAAM L++ + Sbjct: 4 NVLEQMYEKVKEAIADAAVAGGLAAREELPAFVLEVPKDKAHGDLATNAAMQLTKLAKKN 63 Query: 61 PLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE I+A + + + S IAG GFIN + SYL ++ I +G +YGR G Sbjct: 64 PRQIAETIIANLNGEKFGIQSAEIAGPGFINFRMDKSYLYSVVGEITAAGDDYGRTKEGS 123 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +V +EFVSANPTG +H+GH R A VGD L +++ F+GYEVTREYYINDAG Q+N LA Sbjct: 124 GQRVEVEFVSANPTGNLHLGHARGAAVGDALCNVLDFAGYEVTREYYINDAGNQVNNLAR 183 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ RY+QAL D+++PE Y G + GK LA++ LL+ +E+ + + ++ Sbjct: 184 SIEARYRQAL-GQDAEMPEDGYHGEDIVGFGKLLAEEKGDSLLSLSDEERFAFFRQFGLE 242 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 + I+ DL + DI+ SE + + + ++ L +G VYE Sbjct: 243 KELDKIKRDLGLFRVNFDIWYSETSLY--ESGQVETALEALKAKGQVYE----------- 289 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + GDD +R L+K+DGSYTY D+AY + K+ RG+D MI + G+D Sbjct: 290 -----EEGATWLSTMPYGDDKNRVLVKNDGSYTYLTPDIAYHQDKFSRGYDKMINIWGAD 344 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ R++A AA+ ++ VL+ ++V L++DG +KMSKR G +T++ ++DEVG Sbjct: 345 HHGYIPRVKAAMAALGNDPDKLVVLIAQMVSLFQDGEKVKMSKRTGKAVTMQDLMDEVGV 404 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D++R+ R LDFD S ENPVFYVQYA+AR SIFRQA++ + Sbjct: 405 DAIRYFFTMRSMDSHLDFDMDLAISTSNENPVFYVQYAHARICSIFRQAEEQ----SVAI 460 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 P I +E L+ L E P+ + A P++L Y+Y+LAS FH ++ Sbjct: 461 LPIGDIDFGKLSSEAEFDLLRKLGELPQEVSEAAAQYAPHRLIRYVYELASQFHSYYKAE 520 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R V + T R+ L+ AV +I + L ++GV +P M Sbjct: 521 R-------VITEDAAQTQARIALLGAVRIVIANTLRLVGVSAPERM 559 >gi|149182460|ref|ZP_01860935.1| arginyl-tRNA synthetase [Bacillus sp. SG-1] gi|148849853|gb|EDL64028.1| arginyl-tRNA synthetase [Bacillus sp. SG-1] Length = 556 Score = 590 bits (1521), Expect = e-166, Method: Composition-based stats. Identities = 206/587 (35%), Positives = 335/587 (57%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + +L+ +K K + + L +++E P++ +HG STN AM L+R Sbjct: 1 MNIAEQVQDKLRTEIKSAVLKAGLATEDQLPDVILETPKEKSHGDYSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IA+ I A I + ++ + IAG GFIN ++ YL +++++I+ +G EYGR+ G Sbjct: 61 APRMIADDIAANIDKEAASIEKIDIAGPGFINFFMRNEYLTELVANILEAGDEYGRSDAG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG ++N+EFVSANPTG +H+GH R A VGD+L +++ +GY+VTREYYINDAG QI+ LA Sbjct: 121 KGERINVEFVSANPTGDLHLGHARGASVGDSLCNVLDKAGYKVTREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL +D +PE Y G + +G++LAD++ + + EE+ ++Y + Sbjct: 181 LSVEARYFQAL-GHDKAVPEDGYQGADIIGIGQKLADEFGDKYIEASEEERYKFFREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + M+ ++ DL+ + +++ SE + + I D + L ++YE Sbjct: 240 KFEMEKLKKDLEDFRVPFNVWYSETSLY--ENGKIDDALKALKDNNHIYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRST +GDD DR L+K+DG+YTY D++Y + K+ERG D +I + G+ Sbjct: 288 ------EDGATWFRSTELGDDKDRVLIKNDGTYTYLTPDISYHRDKFERGHDILINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ + ++ V + +LV L+++G +KMSKR G +T+R +V+EVG Sbjct: 342 DHHGYIPRMKAAIEALGYDREKLEVEVIQLVHLFKNGEKMKMSKRTGKAVTMRDLVEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+VR+ R +DFD QS ENPV+Y QYA+AR SI RQA + + + Sbjct: 402 LDAVRYFFAMRSADTHMDFDLDLAVSQSNENPVYYAQYAHARICSILRQAAEQGINFEEG 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 ++L+ L ++P V+ +A + P+++A Y+ +LAS FH ++ Sbjct: 462 ------TDYSLLKAEKTIELLKKLGDFPGVVADAAAKRTPHRVANYINELASTFHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + N +LT RL L+ AV + + L +IGV +P +M Sbjct: 516 E------KVLDMENMELTKARLSLIKAVRLTMKNALKLIGVSAPEKM 556 >gi|304407316|ref|ZP_07388969.1| arginyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] gi|304343757|gb|EFM09598.1| arginyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9] Length = 558 Score = 589 bits (1519), Expect = e-166, Method: Composition-based stats. Identities = 206/584 (35%), Positives = 320/584 (54%), Gaps = 34/584 (5%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L+ + + L N + ++ L V+E PRD +HG L+TNAAM L++ +P Sbjct: 8 LYDNVKTALANAV---VAAGLATREELPAFVLEVPRDKSHGDLATNAAMQLTKLAKRNPR 64 Query: 63 TIAELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 IAE I+A + ++S IAG GFIN L+ SYL +++ ++ +G YGR G G Sbjct: 65 QIAEAIIANLDTASASIESAEIAGPGFINFRLNKSYLYPVVTEVLAAGENYGRVNAGAGK 124 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 +V +EFVSANPTG +H+GH R A VGD L +++ F+G+EVTREYYINDAG Q+ LA S+ Sbjct: 125 RVEVEFVSANPTGSLHLGHARGAAVGDALCNVLDFAGHEVTREYYINDAGKQVENLAFSI 184 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 RY+QAL ++ +PE Y G + +ELA + LL+ P+++ + Y ++ Sbjct: 185 EARYKQAL-GQEAVMPEDGYHGADIVGFAQELAAQEGDRLLSLPDDERFIFFRQYGLERE 243 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 + I+ DL + D++ SE + + + +D L G+VYE Sbjct: 244 LDKIKRDLGRFRVGFDLWYSETSLY--EQGLVEQGLDALRATGHVYE------------- 288 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 + + GDD +R L+K+DGSYTY D+AY + KY RG+D +I + G+DH Sbjct: 289 ---EEGATWLNTMQFGDDKNRVLVKNDGSYTYLTPDIAYHRVKYGRGYDRLINIWGADHH 345 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 GY+ R++A A+ ++ VL+ ++V L+++G +KMSKR G +T+ ++DEVG D+ Sbjct: 346 GYIPRMKAAMEALGNDPGKLTVLIAQMVSLFQNGEKVKMSKRTGKAVTMEDLMDEVGVDA 405 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 +R+ R LDFD S ENPVFYVQYA+AR SIFRQA++ + Sbjct: 406 IRYFFTMRSMDSHLDFDMDLAVSTSNENPVFYVQYAHARICSIFRQAEEQG----IAMRS 461 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + I E L+ L E P+ I +A P++L Y+Y+LA+ FH ++ R Sbjct: 462 LSEIDLSRLVTEQEYDLLRKLGELPQEITDAAEQYAPHRLIRYVYELAAQFHSYYKAER- 520 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V ++ + T RL L+ + +I + L ++GV +P M Sbjct: 521 ------VMTDDAEQTQARLALLASTRIVIANVLKLVGVTAPERM 558 >gi|288572901|ref|ZP_06391258.1| arginyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568642|gb|EFC90199.1| arginyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 558 Score = 589 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 210/581 (36%), Positives = 321/581 (55%), Gaps = 32/581 (5%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + L ++ + +V +L + +ERP+ G +TN AM + LG P +A Sbjct: 8 LRDLIGEALSDMARQKEVSSDLLPEVHLERPKREDQGDWATNVAMQACKLLGEKPRDLAA 67 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 ++V R+K D + SV +AG GFIN +L+ ++ ++SS++ SG +YGR +GKG KV +E Sbjct: 68 MVVDRLKDDEHIRSVEVAGPGFINFFLADRWIGNVISSVLSSGDDYGRCDLGKGRKVQVE 127 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+HVGH R A VGD + +++ FSG++V +EYY+NDAG Q++ L S RY Sbjct: 128 FVSANPTGPLHVGHGRGAAVGDIVGNILDFSGWKVEKEYYVNDAGLQMSNLGKSTQSRYF 187 Query: 187 QALYNND-SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245 + L D + PE Y G Y+ + +++ D + E L+ E+ LP +D+S + ++ I Sbjct: 188 ELLGQADKAPFPEDGYKGDYIYDLARQVIDDHGDEYLSVDLEESLPFFRDFSSKVILDGI 247 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 + DLK + D + SE + D + D ++ L ++GY YE + Sbjct: 248 KADLKRFGVTFDCWFSEKSLYEND--QVLDTVEALRKRGYSYE----------------E 289 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365 + FRST GDD DR L +S+G TYFA+D+AY K K++RGFD I V G+DH GYV Sbjct: 290 DGAIWFRSTDFGDDKDRVLFRSNGVPTYFASDVAYHKNKFDRGFDLAIDVWGADHHGYVP 349 Query: 366 RLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 R+ A A+ + V L + V L RDG + MS R+G F+TL V+DEVG D+ RF Sbjct: 350 RMRAAVEALGKSPDDNFAVTLIQFVNLLRDGEQVSMSTRSGQFVTLSDVIDEVGVDATRF 409 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 + R++ LDFD K +S +NPVFYVQYA AR SI R +D + + Sbjct: 410 YFVMRRSDSHLDFDLELAKRESSDNPVFYVQYANARIASITRNLRDKG----IAMPSVDE 465 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 + + + E +LI L+ +P +E A + P+++ Y++DLA FH ++ R Sbjct: 466 LDESLISSSEEKKLITRLSMFPEEVEKAAVEMAPHRIVNYVHDLAGDFHSFYNAHR---- 521 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V N R+ LV A ++ + L I+G+ +P M Sbjct: 522 ---VLDENPS-RPSRILLVKATHVVLTNALRILGISAPERM 558 >gi|126652598|ref|ZP_01724762.1| arginyl-tRNA synthetase [Bacillus sp. B14905] gi|126590589|gb|EAZ84706.1| arginyl-tRNA synthetase [Bacillus sp. B14905] Length = 555 Score = 588 bits (1517), Expect = e-166, Method: Composition-based stats. Identities = 197/587 (33%), Positives = 322/587 (54%), Gaps = 34/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K L + K + + + I +E P+D A+G +TN AM L++ Sbjct: 1 MNAVEQVQQAIKAALAQAVKKAGLVEADTELTIHLETPKDKANGDYATNIAMQLTKLAKK 60 Query: 60 DPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE I+ + + D++ + IAG GF+N+ + +L +++ ++ G +YGR+ G Sbjct: 61 PPRAIAEAILENLDTEGTDIEKIDIAGPGFMNITVRKDFLTGVVTQVIEQGADYGRSNAG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G KV IEFVSANPTG +H+GH R A VGD+L +++ +GY V+REYYINDAG QIN LA Sbjct: 121 AGEKVQIEFVSANPTGDLHLGHARGASVGDSLCNVLDMAGYSVSREYYINDAGNQINNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 S+ RY+QAL D+++PE Y G + + +LA ++ +L +E+ + + + Sbjct: 181 NSLEARYKQAL-GLDAEMPEDGYHGPDIIEIAGKLAIEHGDAILTKSDEERFAFFRQHGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + ++ DL + D++ SE + + I +D L G+V+E Sbjct: 240 ALELDKLKTDLANFRVNFDVWYSETSLY--ENGKIEVALDKLKANGHVFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRST GDD DR L+K+DGS+TY D+AY + K RGFD +I + G+ Sbjct: 288 ------EDGATWFRSTTFGDDKDRVLIKNDGSFTYLTPDIAYHEDKIVRGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ + + V + ++V+LY++G KMSKR G+ +T+R +V+EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDRDTLEVEVIQMVQLYKNGEKFKMSKRTGNAVTMRELVEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+VR+ + +DFD QS ENPV+Y QYA+AR SI R A + + Sbjct: 402 LDAVRYFFVKTAGDSHMDFDLDLAVSQSNENPVYYAQYAHARISSILRSANEQGFAATSE 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 E+ L+ + ++P+V+ +A + P+++A Y+ + A+ FH ++ Sbjct: 462 NLNL-------LTAEKEIDLLKKIGDFPQVVADAAKHRTPHRIANYIQETAAAFHSFYNA 514 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + A+N++LT RL L+ AV + I + L +IGV +P +M Sbjct: 515 E------KVLDASNKELTEARLALITAVRTTIANALRLIGVSAPEKM 555 >gi|119384607|ref|YP_915663.1| arginyl-tRNA synthetase [Paracoccus denitrificans PD1222] gi|166232819|sp|A1B373|SYR_PARDP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|119374374|gb|ABL69967.1| arginyl-tRNA synthetase [Paracoccus denitrificans PD1222] Length = 581 Score = 588 bits (1517), Expect = e-166, Method: Composition-based stats. Identities = 269/586 (45%), Positives = 380/586 (64%), Gaps = 7/586 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF+D + + L +++ ++ + + +E PRD AHG ++TNAAM+L++P G Sbjct: 1 MNLFSDIRTLVIGALAQMEQAGELPAGLDTANVTVEPPRDAAHGDMATNAAMVLAKPAGK 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + AR+ DP + S +AG GF+NL L + ++ + + G +YGR+ +G+ Sbjct: 61 KPRDIAEALAARLAADPRIASAEVAGPGFLNLRLVSGEWQSVVRAALAEGGDYGRSEMGR 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G ++N+EFVSANPTGPMHVGH R AV GD LA+L+ FSG+EVTREYYIND GAQ++ LA Sbjct: 121 GQRINVEFVSANPTGPMHVGHTRGAVFGDALAALLDFSGHEVTREYYINDGGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S + RY++A + ++ EG YPG YL VG+ L KY LL+ PEE+WL V+D++ + Sbjct: 181 SAYERYREA-NGLEPEIREGLYPGDYLIPVGEALKTKYGETLLDKPEEEWLAEVRDFATR 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR+DL LN+ D+F SE + I I+ L + G +YEG+L PPK KT Sbjct: 240 AMMDMIREDLALLNVHMDVFSSEKALY--GTGRIEAAIERLRQAGLIYEGVLEPPKGKTP 297 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R+Q LFRST GDDVDRP+ KSDGS+TYFA D+AY K ERG+D +I V G+D Sbjct: 298 EDWE-PREQTLFRSTAHGDDVDRPVKKSDGSWTYFAPDIAYHWDKIERGYDALIDVFGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYVKR+ A A+S+ + ++V L +LVRL+++G P KMSKRAG F+TLR VV++ G+ Sbjct: 357 HGGYVKRMTAAVKALSDGRVPLDVKLIQLVRLFKNGEPFKMSKRAGTFVTLRDVVEQAGA 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D RF ML RKN LDFDF +V EQSK+NPV+YVQYA AR S+ +A + +D Sbjct: 417 DVTRFHMLTRKNDAALDFDFARVLEQSKDNPVWYVQYASARVNSVLNKAAGMG--VDTTD 474 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 +EL+L +AE+PR +E A A EP+++AF+LYD+AS H W+ G Sbjct: 475 AALAQADLAQLSHPAELELARKVAEWPRTVEIAARAHEPHRIAFFLYDIASELHSLWNRG 534 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P LRF+Q + ++ L +V +I++GL I+GV EM Sbjct: 535 NDEPALRFLQEGDPAAMAAKIALARSVGVVISAGLGILGVTPAKEM 580 >gi|312142763|ref|YP_003994209.1| arginyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus'] gi|311903414|gb|ADQ13855.1| arginyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus'] Length = 553 Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats. Identities = 219/581 (37%), Positives = 334/581 (57%), Gaps = 38/581 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 A S L LK+ + ++E + + I +E+PR+ HG +TN AM + G++P I Sbjct: 11 AKLISALAESLKKAIYEGELELEGVPEISVEQPREKEHGDYATNLAMAAASQAGMNPRKI 70 Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 AE+IV + + + + IAG GFIN L ++L + L I +YG+ G+G +V Sbjct: 71 AEIIVDNFEGEGV-EEISIAGPGFINFKLKKNWLYENLKLINKLKDDYGKIDTGQGKRVQ 129 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 IEFVSANPTGP+HVGH R AVVGD AS+M +GY+V REYYINDAG Q++ LA S R Sbjct: 130 IEFVSANPTGPLHVGHSRGAVVGDVCASIMEAAGYDVEREYYINDAGNQMDILAESTLLR 189 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 Y++ + + LPE Y G Y+ + ++L +Y ++L E+K L I ++++ Q M++ Sbjct: 190 YRE-ICGKEIKLPEDVYAGDYVIEIAEDLYQEYGRDILEEEEQKQLDICREFAYQDMLQK 248 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 I++DL I+ D + SE H P+ I + +D L +GY+YE Sbjct: 249 IKEDLNKFGIEFDNWFSERTLH---PAKINEAVDVLRDKGYIYE---------------- 289 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 + L F+S+ GDD DR ++KSDGS TY AAD+AY K ERGFD +I V G+DH GY+ Sbjct: 290 EEAALWFKSSEFGDDKDRVVIKSDGSPTYLAADIAYHLDKLERGFDKLINVWGADHHGYI 349 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 R++AV A + + +++ ++V L R+G ++MSKRAG F+T+ V +EVG+D+ R+ Sbjct: 350 PRMKAVIEAFGYGRDTLEIIVVQMVNLLRNGEKMQMSKRAGSFVTMNEVNEEVGTDAARY 409 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 + R LDFD KE+S NPV+YVQYA+AR SI A+ + L Sbjct: 410 YYIMRSTDSHLDFDLELAKEESSNNPVYYVQYAHARIHSIIDNAEIEPDSENLKLLS--- 466 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 D +E+ L+ LA +P I+ + +++P+ L Y YDLA+ FH +++ R Sbjct: 467 -------DPAEVDLMKMLASFPEEIKLSAESRQPHHLTAYAYDLATAFHAFYNNCR---- 515 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V +N +L+ RL LV A ++ + L ++G+ +P EM Sbjct: 516 ---VNTDNNELSGARLYLVDAARQVLKNVLTLLGISAPAEM 553 >gi|169826545|ref|YP_001696703.1| arginyl-tRNA synthetase [Lysinibacillus sphaericus C3-41] gi|168991033|gb|ACA38573.1| Arginyl-tRNA synthetase [Lysinibacillus sphaericus C3-41] Length = 556 Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats. Identities = 196/587 (33%), Positives = 321/587 (54%), Gaps = 34/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K L + K + + + I +E P+D A+G +TN AM L++ Sbjct: 2 MNAVEQVQQAIKAALAQAVKKAGLVEADTELMIHLETPKDKANGDYATNIAMQLTKLAKK 61 Query: 60 DPLTIAELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE I+ + D++ + IAG GF+N+ + +L +++ ++ G +YGR+ G Sbjct: 62 PPRAIAEAILENLDTAGTDIEKIDIAGPGFMNITVRKDFLTGVVTQVLEQGNDYGRSNAG 121 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G K+ IEFVSANPTG +H+GH R A VGD+L +++ +GY V+REYYINDAG QIN LA Sbjct: 122 AGEKIQIEFVSANPTGDLHLGHARGASVGDSLCNVLDMAGYSVSREYYINDAGNQINNLA 181 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 S+ RY+QAL D+++PE Y G + + +LA ++ +L +E+ + + + Sbjct: 182 YSLEARYKQAL-GLDAEMPEDGYHGPDIIEIAGKLAKEHGDAILAKSDEERFAFFRQHGL 240 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + ++ DL + D++ SE + + I +D L G+V+E Sbjct: 241 ALELDKLKTDLANFRVNFDVWYSETSLY--ENGKIEVALDKLKANGHVFE---------- 288 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRST GDD DR L+K+DGS+TY D+AY + K RGFD +I + G+ Sbjct: 289 ------EDGATWFRSTTFGDDKDRVLIKNDGSFTYLTPDIAYHEDKIVRGFDKLINIWGA 342 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ + + V + ++V+LY++G KMSKR G+ +T+R +V+EVG Sbjct: 343 DHHGYIPRMKAAIQALGYDRDTLEVEVIQMVQLYKNGEKFKMSKRTGNAVTMRELVEEVG 402 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+VR+ + +DFD QS ENPV+Y QYA+AR SI R A + + Sbjct: 403 LDAVRYFFVKTAGDSHMDFDLDLAVSQSNENPVYYAQYAHARISSILRSANEQGFAATSE 462 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 E+ L+ + ++P+V+ +A + P+++A Y+ + A+ FH ++ Sbjct: 463 NLTL-------LTAEKEIDLLKKIGDFPQVVADAAKHRTPHRIANYIQETAAAFHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + A+N++LT RL L+ AV + I + L +IGV +P +M Sbjct: 516 E------KVLDASNKELTEARLALITAVRTTIANALRLIGVSAPEKM 556 >gi|47093569|ref|ZP_00231328.1| arginyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858] gi|226225108|ref|YP_002759215.1| arginyl tRNA synthetase [Listeria monocytogenes Clip81459] gi|259511650|sp|C1KYX7|SYR_LISMC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|47018040|gb|EAL08814.1| arginyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858] gi|225877570|emb|CAS06284.1| arginyl tRNA synthetase [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|328465162|gb|EGF36430.1| arginyl-tRNA synthetase [Listeria monocytogenes 1816] Length = 556 Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats. Identities = 212/587 (36%), Positives = 326/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + + +L ++K+ + + +E+ + I++E P+D HG STN AM L+R Sbjct: 1 MNVMQENQIKLIEHIKQGVVQAVGLEEAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKK 60 Query: 60 DPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IV +K D + V IAG GFIN YL +YL ++ I+ +YG + G Sbjct: 61 APRQIAESIVPELKKDNKLIKEVEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG K IEFVSANPTG +H+GH R A +GD+LA++M +G++V+REYYINDAG QIN L Sbjct: 121 KGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLV 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LS RY +AL DS+ PE Y G + +GK+LA KY + ++ EE+ + + ++ Sbjct: 181 LSAEARYFEAL-GLDSEFPEDGYRGADIISLGKDLAAKYGDKYVHTSEEERRSVFRVDAL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 +R DL+ + D + SE + + + + ++ L GY+YE Sbjct: 240 AFETGKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 R+T DD DR L+KSDGSYTYF D+AY K ERGFD +I + G+ Sbjct: 288 ------QDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R+ A A+ Q+ V + +LV L+ DG+ +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ R + ++FD K S +NPV+YVQYA+AR SI R K+ ++ D Sbjct: 402 LDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 +++ E+E+D L+ L E+ V+ A + P+++ YL DLAS FH ++ Sbjct: 462 -ADMSLLQTEAEYD-----LLKVLGEFADVVAEAATKRAPHRIVRYLNDLASSFHRFYNS 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N ++T RL L+ + +GL ++GV +P +M Sbjct: 516 N------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 556 >gi|217963335|ref|YP_002349013.1| arginyl-tRNA synthetase [Listeria monocytogenes HCC23] gi|254782969|sp|B8DBE8|SYR_LISMH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|217332605|gb|ACK38399.1| arginyl-tRNA synthetase [Listeria monocytogenes HCC23] gi|307572087|emb|CAR85266.1| argS [Listeria monocytogenes L99] Length = 556 Score = 588 bits (1516), Expect = e-165, Method: Composition-based stats. Identities = 212/587 (36%), Positives = 326/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + + +L ++K+ + + +E+ + I++E P+D HG STN AM L+R Sbjct: 1 MNVMQENQIKLIAHIKQAVVQAVGLEEAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKK 60 Query: 60 DPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IV +K D + V IAG GFIN YL +YL ++ I+ +YG + G Sbjct: 61 APRQIAESIVPELKKDNKLIKEVEIAGPGFINFYLDNAYLTDLVPVILTEDKQYGESDFG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG K IEFVSANPTG +H+GH R A +GD+LA++M +G++V+REYYINDAG QIN L Sbjct: 121 KGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLV 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LS RY +AL DS+ PE Y G + +GK+LA KY + ++ EE+ + + ++ Sbjct: 181 LSAEARYFEAL-GLDSEFPEDGYRGADIISLGKDLAAKYGDKYVHTSEEERRSVFRVDAL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 +R DL+ + D + SE + + + + ++ L GY+YE Sbjct: 240 AFETGKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 R+T DD DR L+KSDGSYTYF D+AY K ERGFD +I + G+ Sbjct: 288 ------QDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R+ A A+ Q+ V + +LV L+ DG+ +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ R + ++FD K S +NPV+YVQYA+AR SI R K+ ++ D Sbjct: 402 LDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 +++ E+E+D L+ L E+ V+ A + P+++ YL DLAS FH ++ Sbjct: 462 -ADMSLLQTEAEYD-----LLKVLGEFADVVAEAATKRAPHRIVRYLNDLASAFHRFYNS 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N ++T RL L+ + +GL ++GV +P +M Sbjct: 516 N------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 556 >gi|46908732|ref|YP_015121.1| arginyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. F2365] gi|254826340|ref|ZP_05231341.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J1-194] gi|254854387|ref|ZP_05243735.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL R2-503] gi|255519904|ref|ZP_05387141.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J1-175] gi|300766060|ref|ZP_07076028.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL N1-017] gi|67461793|sp|Q71WL8|SYR_LISMF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|46882004|gb|AAT05298.1| arginyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. F2365] gi|258607786|gb|EEW20394.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL R2-503] gi|293595581|gb|EFG03342.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J1-194] gi|300513206|gb|EFK40285.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL N1-017] Length = 556 Score = 588 bits (1515), Expect = e-165, Method: Composition-based stats. Identities = 212/587 (36%), Positives = 326/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + + +L ++K+ + + +E+ + I++E P+D HG STN AM L+R Sbjct: 1 MNVMQENQIKLIEHIKQAVVQAVGLEEAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKK 60 Query: 60 DPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IV +K D + V IAG GFIN YL +YL ++ I+ +YG + G Sbjct: 61 APRQIAESIVPELKKDNKLIKEVEIAGPGFINFYLDNAYLTDLVPVILTEDKQYGESDFG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG K IEFVSANPTG +H+GH R A +GD+LA++M +G++V+REYYINDAG QIN L Sbjct: 121 KGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLV 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LS RY +AL DS+ PE Y G + +GK+LA KY + ++ EE+ + + ++ Sbjct: 181 LSAEARYFEAL-GLDSEFPEDGYRGADIISLGKDLAAKYGDKYVHTSEEERRSVFRVDAL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 +R DL+ + D + SE + + + + ++ L GY+YE Sbjct: 240 AFETGKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 R+T DD DR L+KSDGSYTYF D+AY K ERGFD +I + G+ Sbjct: 288 ------QDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R+ A A+ Q+ V + +LV L+ DG+ +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ R + ++FD K S +NPV+YVQYA+AR SI R K+ ++ D Sbjct: 402 LDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 +++ E+E+D L+ L E+ V+ A + P+++ YL DLAS FH ++ Sbjct: 462 -ADMSLLQTEAEYD-----LLKVLGEFADVVAEAATKRAPHRIVRYLNDLASSFHRFYNS 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N ++T RL L+ + +GL ++GV +P +M Sbjct: 516 N------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 556 >gi|290892723|ref|ZP_06555715.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J2-071] gi|290557783|gb|EFD91305.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J2-071] Length = 556 Score = 588 bits (1515), Expect = e-165, Method: Composition-based stats. Identities = 212/587 (36%), Positives = 326/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + + +L ++K+ + + +E+ + I++E P+D HG STN AM L+R Sbjct: 1 MNVMQENQIKLIAHIKQAVVQAVGLEEAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKK 60 Query: 60 DPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IV +K D + V IAG GFIN YL +YL ++ I+ +YG + G Sbjct: 61 APRQIAESIVPELKKDNKLIKEVEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG K IEFVSANPTG +H+GH R A +GD+LA++M +G++V+REYYINDAG QIN L Sbjct: 121 KGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLV 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LS RY +AL DS+ PE Y G + +GK+LA KY + ++ EE+ + + ++ Sbjct: 181 LSAEARYFEAL-GLDSEFPEDGYRGADIISLGKDLAAKYGDKYVHTSEEERRSVFRVDAL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 +R DL+ + D + SE + + + + ++ L GY+YE Sbjct: 240 AFETGKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 R+T DD DR L+KSDGSYTYF D+AY K ERGFD +I + G+ Sbjct: 288 ------QDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R+ A A+ Q+ V + +LV L+ DG+ +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ R + ++FD K S +NPV+YVQYA+AR SI R K+ ++ D Sbjct: 402 LDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 +++ E+E+D L+ L E+ V+ A + P+++ YL DLAS FH ++ Sbjct: 462 -ADMSLLQTEAEYD-----LLKVLGEFADVVAEAATKRAPHRIVRYLNDLASAFHRFYNS 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N ++T RL L+ + +GL ++GV +P +M Sbjct: 516 N------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 556 >gi|312879774|ref|ZP_07739574.1| arginyl-tRNA synthetase [Aminomonas paucivorans DSM 12260] gi|310783065|gb|EFQ23463.1| arginyl-tRNA synthetase [Aminomonas paucivorans DSM 12260] Length = 558 Score = 587 bits (1514), Expect = e-165, Method: Composition-based stats. Identities = 209/588 (35%), Positives = 324/588 (55%), Gaps = 36/588 (6%) Query: 4 FADFSSRLKNYLKEIDCKIKVEKKILD----RIVIERPRDCAHGHLSTNAAMILSRPLGL 59 D L+ ++ + + EK R+++ERPR G + NAAM L++ L Sbjct: 1 MEDMREALQKKVEAVLASLAQEKGTALPEGFRVLLERPRRSGQGDWACNAAMQLAKTFSL 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +A + R+ D + +AG GF+NL LSP ++++++ I+ +YGR +G+ Sbjct: 61 SPRDLATQLAERLGKDDLLAGAEVAGPGFLNLTLSPVWVKELVGRILDQKEDYGRVDVGR 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KV +EFVSANPTGP+H+GH R A VGD AS++AF+G++V REYYINDAG Q+ L Sbjct: 121 GRKVQVEFVSANPTGPLHMGHGRGAAVGDIAASVLAFAGWKVEREYYINDAGLQMELLGR 180 Query: 180 SVFWRYQQALY-NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 S RY + L +++ LPE Y G Y+ + +++ ++ + PEE+ LP D + Sbjct: 181 SARSRYFELLGRGDEAPLPEDGYHGEYMTDLARQILEEEGPGWADLPEEEALPRFSDATA 240 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + ++ IR DL+A + D++ SE ++ D ++ I+ L +GY Y+ Sbjct: 241 KRVLDWIRRDLEAFGVVFDVWFSEKSLYQDD--QVQRAIEALKGRGYAYDA--------- 289 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRST GDD DR +++S+G+ TYF +D+ Y K KY+RGFD ++ V G+ Sbjct: 290 -------DGAVWFRSTAFGDDKDRVMIRSNGAPTYFTSDVVYHKNKYDRGFDLVVNVWGA 342 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R+++ +A+ + V+L +LV L R G P+ MSKRAG FITL+ V+DEVG Sbjct: 343 DHHGYIPRMKSAVSAMGRDPEDLQVMLIQLVNLLRGGEPVSMSKRAGTFITLQDVMDEVG 402 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF-PDLDF 477 D+ RF + R+ LDFD K+ S +NPVFYVQYA+AR SI R+ + P Sbjct: 403 VDATRFFFVMRRCDSHLDFDLELAKKSSSDNPVFYVQYAHARICSILRETEARGLPSPTP 462 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 + N++ EL L LA +P I A EP+++A+Y +LA FHG ++ Sbjct: 463 EDLDPNLLST-----PEELALATVLARFPEEIRKAAEGLEPHRVAYYAQELAEAFHGFYN 517 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R + L R+ L+ A + + L ++GV +P M Sbjct: 518 AAR-------ILGVEEPLRKARMLLLEATRITLVNALRLLGVRAPERM 558 >gi|56965653|ref|YP_177387.1| arginyl-tRNA synthetase [Bacillus clausii KSM-K16] gi|81364951|sp|Q5WB34|SYR_BACSK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|56911899|dbj|BAD66426.1| arginyl-tRNA synthetase [Bacillus clausii KSM-K16] Length = 556 Score = 587 bits (1514), Expect = e-165, Method: Composition-based stats. Identities = 200/587 (34%), Positives = 313/587 (53%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +L+ ++ + ++ + + +++E P+D AHG +TN AM L+R Sbjct: 1 MNHMERKKEQLRVEVRRAVLQAELATESEVPSVLLEAPKDKAHGDFATNIAMQLARIAKK 60 Query: 60 DPLTIAELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA ++ + IAG GFIN +L YLR+++ ++ +YG + +G Sbjct: 61 APRAIAEELVANFDRKQAGIEKIEIAGPGFINFFLDNGYLRELIPQVLTEKDDYGSSDVG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 +G KV IEFVSANPTG +H+GH R A VGDT+A++M +GY+V+REYYINDAG QI LA Sbjct: 121 QGEKVLIEFVSANPTGDLHLGHARGAAVGDTIANIMDKAGYKVSREYYINDAGNQIENLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 S+ RY Q L D +PE Y G + + K+L D+ + E++ L ++DY + Sbjct: 181 ASLNARYLQVL-GEDQPMPEDGYHGQDIIDIAKQLVDEAGDQYRQLDEKERLAFMRDYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + ++ I+ DL A ++ D + SE + + + + L + YE Sbjct: 240 KKELEKIKQDLNAYRVEFDKWFSETSLY--ESGQVERGLQVLKDKNETYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 RST GDD DR L+K DG+YTY D++Y K++RG D +I V+G+ Sbjct: 288 ------KDGATWLRSTAYGDDKDRVLVKQDGTYTYLTPDISYHLDKFDRGHDRLIDVLGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R+ A A+ A+ NV + ++V L++ G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMRAAIQALGYDPARFNVQIIQMVSLFQGGEKVKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ R LDFD +S ENPV+Y+QYA+AR SI RQ +++ + Sbjct: 402 VDATRYFFAMRSPDTHLDFDMDLAVSKSNENPVYYIQYAHARVCSILRQGEELGIPYSAN 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + E +L+ + E+P + A Q P ++A Y YDLA H ++ Sbjct: 462 TDLSPIAS------EKEYELLKAIGEFPGAVAEAATKQIPQRIANYAYDLAQALHSFYN- 514 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R + N+ L+ RL L+ A I + L ++GVE+P +M Sbjct: 515 -----VTRVIDTENKDLSAARLALMKATQMTIKNALALLGVEAPEKM 556 >gi|254932197|ref|ZP_05265556.1| arginyl-tRNA synthetase [Listeria monocytogenes HPB2262] gi|293583753|gb|EFF95785.1| arginyl-tRNA synthetase [Listeria monocytogenes HPB2262] gi|328471050|gb|EGF41959.1| arginyl-tRNA synthetase [Listeria monocytogenes 220] gi|332312990|gb|EGJ26085.1| Arginyl-tRNA synthetase [Listeria monocytogenes str. Scott A] Length = 556 Score = 587 bits (1514), Expect = e-165, Method: Composition-based stats. Identities = 212/587 (36%), Positives = 326/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + + +L ++K+ + + +E+ + I++E P+D HG STN AM L+R Sbjct: 1 MNVMQENQIKLIEHIKQAVVQAVGLEEAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKK 60 Query: 60 DPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IV +K D + V IAG GFIN YL +YL ++ I+ +YG + G Sbjct: 61 APRQIAESIVPELKKDNKLIKEVEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG K IEFVSANPTG +H+GH R A +GD+LA++M +G++V+REYYINDAG QIN L Sbjct: 121 KGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLV 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LS RY +AL DS+ PE Y G + +GK+LA KY + ++ EE+ + + ++ Sbjct: 181 LSAEARYFEAL-GLDSEFPEDGYRGADIISLGKDLAAKYGDKYVHTSEEERRSVFRVDAL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 +R DL+ + D + SE + + + + ++ L GY+YE Sbjct: 240 AFETGKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 R+T DD DR L+KSDGSYTYF D+AY K ERGFD +I + G+ Sbjct: 288 ------QDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R+ A A+ Q+ V + +LV L+ DG+ +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ R + ++FD K S +NPV+YVQYA+AR SI R K+ ++ D Sbjct: 402 LDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 +++ E+E+D L+ L E+ V+ A + P+++ YL DLAS FH ++ Sbjct: 462 -ADMSLLQTEAEYD-----LLKVLGEFADVVAEAATKRAPHRIVRYLNDLASSFHRFYNS 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N ++T RL L+ + +GL ++GV +P +M Sbjct: 516 N------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 556 >gi|296114981|ref|ZP_06833625.1| arginyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769] gi|295978443|gb|EFG85177.1| arginyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769] Length = 629 Score = 587 bits (1514), Expect = e-165, Method: Composition-based stats. Identities = 261/600 (43%), Positives = 376/600 (62%), Gaps = 22/600 (3%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 LF + S ++ L ++ + I+ R+ + RD +HG L+TNAA+++++ P Sbjct: 34 LFVRYLSHVREALGQVVP--HLPPAIVARVEVTPTRDPSHGDLATNAALLVAKVARRKPA 91 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 IA + ++ P + + AG GF+NL L+P+ L+++ + ++ +G YG +G G K Sbjct: 92 DIAADLARVLESVPGITAAQAAGPGFVNLKLAPAVLQEVAAQVLRAGDSYGDGHVGDGVK 151 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VN+E+VSANPTGPMHVGHCR AVVGD LA+L++ +GY VT+EYYINDAGAQ+ LA + + Sbjct: 152 VNVEYVSANPTGPMHVGHCRGAVVGDALANLLSKAGYGVTKEYYINDAGAQVTALAWAAY 211 Query: 183 WRYQQAL-----YNNDSDLPEGY--YPGVYLKHVGKELADKYSSELLN-----FPEEKWL 230 WRY QA+ + + L G Y G YL VG+ELA ++ + L P + W+ Sbjct: 212 WRYLQAIGTTLTQDEFAALVPGGIQYGGDYLVPVGEELAARHGTSLAADGGRPAPVDVWM 271 Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290 V+ +V MM +IR+DL+AL + HD+F SE ID L +G +YEG+ Sbjct: 272 QTVRTETVARMMAMIREDLEALGVHHDVFTSEAKILA--DGETNRAIDRLTAKGLIYEGV 329 Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350 L PPK K + + R Q LFRST GDDVDRPL KSDGS TYFA D+ Y K RG D Sbjct: 330 LEPPKGKLPEDWEA-RPQTLFRSTEFGDDVDRPLRKSDGSNTYFANDIGYHADKIARGAD 388 Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEK-KAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 +I V G+DH GYV R++A AA+ + K +++VLLC++VR+ RDG P++MSKRAG F+T Sbjct: 389 VLIDVWGADHGGYVTRMKAAVAALGQDGKPELDVLLCQIVRIVRDGQPVRMSKRAGTFVT 448 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 LR ++DEVG D+VRF ML RK ++FD +V QS++NPVFYVQYA+ARC S+ R A Sbjct: 449 LRDLIDEVGRDAVRFTMLTRKADAQMEFDLDQVVAQSRDNPVFYVQYAHARCCSVLRGAA 508 Query: 470 DIFP----DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 ++ D + +EL L+ +A++PRV+E+A IA EP+++AFYL Sbjct: 509 ELAQAGRLAGDLSAEALAALDLSGLSSDAELALLGRMAQWPRVVESAAIAHEPHRIAFYL 568 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +LA+ FH W+ GR++ LRF+ ++ +LT +L LV A A +I SGL ++GVE EM Sbjct: 569 QELAADFHALWNRGRDDATLRFLHEDDAQLTRTKLALVEATARVIRSGLRVLGVEPVKEM 628 >gi|116873927|ref|YP_850708.1| arginyl-tRNA synthetase [Listeria welshimeri serovar 6b str. SLCC5334] gi|123461434|sp|A0ALP7|SYR_LISW6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|116742805|emb|CAK21929.1| arginyl-tRNA synthetase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 556 Score = 587 bits (1514), Expect = e-165, Method: Composition-based stats. Identities = 210/587 (35%), Positives = 326/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + + +L ++K+ + + + + + I++E P+D HG STN AM L+R Sbjct: 1 MNVMQENQIKLIEHIKQAVVQAVGLPEVEVPEILLEVPKDKKHGDYSTNIAMQLARVAKK 60 Query: 60 DPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IV +K D + V IAG GFIN YL +YL +++ I+ +YG + G Sbjct: 61 APRQIAESIVPELKKDNKLIKEVEIAGPGFINFYLDNAYLTELVPVILTEDHKYGESDFG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG K IEFVSANPTG +H+GH R A +GD+LA++M +G++V+REYYINDAG QIN L Sbjct: 121 KGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLV 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LS RY +AL +S+ PE Y G + +GK+LA KY + +N EE+ + + ++ Sbjct: 181 LSAEARYFEAL-GLESEFPEDGYRGADIISLGKDLAAKYGDKYVNTSEEERRSVFRVDAL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 +R DL+ + D + SE + + + + ++ L GY+YE Sbjct: 240 AFETGKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 R+T DD DR L+KSDGSYTYF D+AY K ERGFD +I + G+ Sbjct: 288 ------QDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R+ A A+ Q+ V + +LV L+ DG+ +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ R + ++FD K S +NPV+YVQYA+AR SI R K+ ++ D Sbjct: 402 LDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 +++ E+E+D L+ L E+ V+ A + P+++ YL DLA+ FH ++ Sbjct: 462 -ADMSLLQTEAEYD-----LLKVLGEFADVVAEAAAKRAPHRIVRYLNDLATAFHRFYNS 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N ++T RL L+ + +GL ++GV +P +M Sbjct: 516 N------KVLDMDNLEVTQARLSLIKTAQITLRNGLTLLGVSAPEKM 556 >gi|16801767|ref|NP_472035.1| arginyl-tRNA synthetase [Listeria innocua Clip11262] gi|21542253|sp|Q927T2|SYR_LISIN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|16415242|emb|CAC97932.1| arginyl tRNA synthetase [Listeria innocua Clip11262] Length = 556 Score = 587 bits (1514), Expect = e-165, Method: Composition-based stats. Identities = 211/587 (35%), Positives = 327/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + + +L ++K+ + + +E+ + I++E P+D HG STN AM L+R Sbjct: 1 MNVMQENQIKLIEHIKQAVVQAVGLEETEVPEILLEVPKDKKHGDYSTNIAMQLARVAKK 60 Query: 60 DPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IV +K D + V IAG GFIN YL +YL ++ I+ +YG + G Sbjct: 61 APRQIAESIVPELKKDTKLIKEVEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG K IEFVSANPTG +H+GH R A +GD+LA++M +G++V+REYYINDAG QIN L Sbjct: 121 KGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLV 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LS RY +AL +S+ PE Y G + +GK+LA KY + +N EE+ + + ++ Sbjct: 181 LSAEARYFEAL-GLESEFPEDGYRGSDIIALGKDLAAKYGDKYVNASEEERRSVFRVDAL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 +R DL+ + D + SE + + + + ++ L GY+YE Sbjct: 240 AFETGKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 R+T DD DR L+KSDGSYTYF D+AY K ERGFD +I + G+ Sbjct: 288 ------QDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R+ A A+ Q+ V + +LV L+ DG+ +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ R + ++FD K S +NPV+YVQYA+AR SI R K+ ++ D Sbjct: 402 LDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVSKD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 +++ E+E+D L+ L E+ V+ A + + P+++ YL DLA+ FH ++ Sbjct: 462 -ANMSLLETEAEYD-----LLKVLGEFADVVAEAAVKRAPHRIVRYLNDLATAFHRFYNS 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N ++T RL L+ + +GL ++GV +P +M Sbjct: 516 N------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 556 >gi|23100470|ref|NP_693937.1| arginyl-tRNA synthetase [Oceanobacillus iheyensis HTE831] gi|38372527|sp|Q8EM45|SYR_OCEIH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|22778703|dbj|BAC14971.1| arginine-tRNA ligase [Oceanobacillus iheyensis HTE831] Length = 556 Score = 587 bits (1514), Expect = e-165, Method: Composition-based stats. Identities = 208/587 (35%), Positives = 323/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + +LK + ++ + + I++E+P+D AHG +TN AM L+R Sbjct: 1 MNVLEQTEQKLKEQIHHAVIHAELATEDQVPDIILEKPKDKAHGDFATNIAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IA+ I +++ K + V+ V IAG GFIN ++ +L +++ +++ +G YG++ G Sbjct: 61 APRQIADDIASKLNKSEASVEKVEIAGPGFINFFMKQDFLGEVIDTVLSAGDNYGKSTGG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G KV +EFVS NPTG +H+GH R A GD L ++ A +GYEV REYYINDAG QIN L Sbjct: 121 NGEKVQVEFVSVNPTGDLHLGHARNAAFGDVLCNVFAAAGYEVEREYYINDAGNQINNLG 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY Q + D D+PE Y G + + KEL K + + E+ L K+Y + Sbjct: 181 LSVEARYLQEI-GQDVDMPEDGYQGQAIIEIAKELVKKDGEKWADKDHEERLDFFKEYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 +A ++ I DLK ++ D + SE + I D + L GY +E Sbjct: 240 KASLRNIESDLKDFRVEFDHWFSERSLFK--DGQIDDTLAVLDDGGYTFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 L F++T GDD DR L+K DG+YTY D+AY K K +RGFD +I V GS Sbjct: 288 ------KDGALWFKTTEFGDDKDRVLIKGDGNYTYLTPDIAYHKNKLDRGFDRIINVWGS 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R+ A A+ + +V + ++V L+ G +KMSKR G ++LR ++DEVG Sbjct: 342 DHHGYIPRMRAALQALGYPVEKFDVKIIQMVNLFEAGEKVKMSKRTGKAVSLRELMDEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+VR+ + R N LDFD K QS +NPV+Y QYA+AR ++ QAK + + + Sbjct: 402 IDAVRYYFVARSNDSQLDFDMDLAKSQSNDNPVYYAQYAHARICTMLSQAKSKGFNTEAE 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 F +++ E E D L+ + E P++I +A P+K+ Y+++LA++ H ++ Sbjct: 462 -FDASLLTAEKELD-----LLKKIGELPQMIVDAADKHTPHKVTQYIFELATLLHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + A+N T R+ L+ AV + + + IIG+ +P +M Sbjct: 516 E------KVLDADNEARTHARIALMKAVRQTLANAMTIIGISAPEKM 556 >gi|254993097|ref|ZP_05275287.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J2-064] Length = 556 Score = 587 bits (1513), Expect = e-165, Method: Composition-based stats. Identities = 212/587 (36%), Positives = 322/587 (54%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + + +L ++K+ + + +E+ + I++E P+D HG STN AM L+R Sbjct: 1 MNVMQENQIKLIEHIKQAVVQAVGLEEAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKK 60 Query: 60 DPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IV +K D + V IAG GFIN YL +YL ++ I+ +YG + G Sbjct: 61 APRQIAESIVPELKKDNKLIKEVEIAGPGFINFYLDNAYLTDLVPVILTEDKQYGESDFG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG K IEFVSANPTG +H+GH R A +GD+LA++M +G++V+REYYINDAG QIN L Sbjct: 121 KGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLV 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LS RY +AL DS+ PE Y G + +GK+LA KY + ++ EE+ + Sbjct: 181 LSAEARYFEAL-GLDSEFPEDGYRGADIISLGKDLAAKYGDKYVHTSEEERRSVFXXXXX 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 R DL+ + D + SE + + + + ++ L GY+YE Sbjct: 240 XXXXXXXRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 R+T DD DR L+KSDGSYTYF D+AY K ERGFD +I + G+ Sbjct: 288 ------QDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R+ A A+ Q+ V + +LV L+ DG+ +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ R + ++FD K S +NPV+YVQYA+AR SI R K+ ++ D Sbjct: 402 LDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 +++ E+E+D L+ L E+ V+ A + P+++ YL DLAS FH ++ Sbjct: 462 -ADMSLLQTEAEYD-----LLKVLGEFADVVAEAATKRAPHRIVRYLNDLASSFHRFYNS 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N ++T RL L+ + +GL ++GV +P +M Sbjct: 516 N------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 556 >gi|299537939|ref|ZP_07051225.1| arginyl-tRNA synthetase [Lysinibacillus fusiformis ZC1] gi|298726521|gb|EFI67110.1| arginyl-tRNA synthetase [Lysinibacillus fusiformis ZC1] Length = 555 Score = 587 bits (1513), Expect = e-165, Method: Composition-based stats. Identities = 195/587 (33%), Positives = 319/587 (54%), Gaps = 34/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCK-IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K + + K +E I +E P+D A+G +TN AM L++ Sbjct: 1 MNAVEQVQQAIKAAIVQAVEKAGLIEAGTELSIHLETPKDKANGDYATNIAMQLTKLAKK 60 Query: 60 DPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE I+ + D++ + IAG GF+N+ + +L ++++ ++ G +YGR+ G Sbjct: 61 PPRAIAEAILENLDTTGTDIEKIDIAGPGFMNITVRKDFLTEVVTQVLEQGTDYGRSNAG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G KV +EFVSANPTG +H+GH R A VGD+L +++ +GY V+REYYINDAG QIN LA Sbjct: 121 AGEKVQVEFVSANPTGDLHLGHARGASVGDSLCNVLDMAGYSVSREYYINDAGNQINNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 S+ RY+QAL +++PE Y G + + +LA ++ +L +++ + + + Sbjct: 181 YSLEARYKQAL-GMKAEMPEDGYHGQDIIDIAGKLAKEHGDAILAKSDDERFAFFRQHGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + ++ DL + D++ SE + + I +D L G+V+E Sbjct: 240 ALELDKLKTDLANFRVNFDVWYSETSLY--ENGKIEVALDKLKANGHVFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRST GDD DR L+K+DGS+TY D+AY + K RGFD +I + G+ Sbjct: 288 ------EDGATWFRSTTFGDDKDRVLIKNDGSFTYLTPDIAYHEDKIVRGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ + + V + ++V+LY++G KMSKR G+ +T+R +V+EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDRDTLEVEVIQMVQLYKNGEKFKMSKRTGNAVTMRELVEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+VR+ + +DFD QS ENPV+Y QYA+AR SI R A + Sbjct: 402 LDAVRYFFVKTAGDSHMDFDLDLAVSQSNENPVYYAQYAHARISSILRSANEQG------ 455 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 F E+ L+ + ++P+V+ A + P+++A Y+ + A+ FH ++ Sbjct: 456 -FAATTEHLNLLTAEKEIDLLKKIGDFPKVVAEAAKHRTPHRIANYIQETAAAFHSFYNA 514 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + A+N++LT RL L+ AV + I + L +IGV +P +M Sbjct: 515 E------KVLDASNKELTEARLALITAVRTTIANALRLIGVSAPEKM 555 >gi|16804599|ref|NP_466084.1| arginyl-tRNA synthetase [Listeria monocytogenes EGD-e] gi|47097104|ref|ZP_00234673.1| arginyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854] gi|224500484|ref|ZP_03668833.1| arginyl-tRNA synthetase [Listeria monocytogenes Finland 1988] gi|224503648|ref|ZP_03671955.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL R2-561] gi|254829538|ref|ZP_05234225.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] gi|254900987|ref|ZP_05260911.1| arginyl-tRNA synthetase [Listeria monocytogenes J0161] gi|254913799|ref|ZP_05263811.1| arginyl-tRNA synthetase [Listeria monocytogenes J2818] gi|254938188|ref|ZP_05269885.1| arginyl-tRNA synthetase [Listeria monocytogenes F6900] gi|255025720|ref|ZP_05297706.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL J2-003] gi|284802999|ref|YP_003414864.1| arginyl-tRNA synthetase [Listeria monocytogenes 08-5578] gi|284996140|ref|YP_003417908.1| arginyl-tRNA synthetase [Listeria monocytogenes 08-5923] gi|21542250|sp|Q8Y493|SYR_LISMO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|16412049|emb|CAD00639.1| arginyl tRNA synthetase [Listeria monocytogenes EGD-e] gi|47014509|gb|EAL05473.1| arginyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854] gi|258601953|gb|EEW15278.1| arginyl-tRNA synthetase [Listeria monocytogenes FSL N3-165] gi|258610800|gb|EEW23408.1| arginyl-tRNA synthetase [Listeria monocytogenes F6900] gi|284058561|gb|ADB69502.1| arginyl-tRNA synthetase [Listeria monocytogenes 08-5578] gi|284061607|gb|ADB72546.1| arginyl-tRNA synthetase [Listeria monocytogenes 08-5923] gi|293591816|gb|EFG00151.1| arginyl-tRNA synthetase [Listeria monocytogenes J2818] Length = 556 Score = 587 bits (1513), Expect = e-165, Method: Composition-based stats. Identities = 212/587 (36%), Positives = 326/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + + +L ++K+ + + +E+ + I++E P+D HG STN AM L+R Sbjct: 1 MNVMQENQIKLIEHIKQAVVQAVGLEETEVPEILLEVPKDKKHGDYSTNIAMQLARVAKK 60 Query: 60 DPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IV +K D + V IAG GFIN YL +YL ++ I+ +YG + G Sbjct: 61 APRQIAESIVPELKKDNKLIKEVEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG K IEFVSANPTG +H+GH R A +GD+LA++M +G++V+REYYINDAG QIN L Sbjct: 121 KGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLV 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LS RY +AL +S+ PE Y G + +GK+LA KY + ++ EE+ I + ++ Sbjct: 181 LSAEARYFEAL-GLESEFPEDGYRGADIISLGKDLAAKYGDKYVHTSEEERRSIFRVDAL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 +R DL+ + D + SE + + + + ++ L GY+YE Sbjct: 240 AFETGKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 R+T DD DR L+KSDGSYTYF D+AY K ERGFD +I + G+ Sbjct: 288 ------QDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R+ A A+ Q+ V + +LV L+ DG+ +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ R + ++FD K S +NPV+YVQYA+AR SI R K+ ++ D Sbjct: 402 LDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 +++ E+E+D L+ L E+ V+ A + P+++ YL DLAS FH ++ Sbjct: 462 -ADMSLLQTEAEYD-----LLKVLGEFADVVAEAAAKRAPHRIVRYLNDLASAFHRFYNS 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N ++T RL L+ + +GL ++GV +P +M Sbjct: 516 N------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 556 >gi|315644448|ref|ZP_07897581.1| arginyl-tRNA synthetase [Paenibacillus vortex V453] gi|315280198|gb|EFU43491.1| arginyl-tRNA synthetase [Paenibacillus vortex V453] Length = 559 Score = 586 bits (1511), Expect = e-165, Method: Composition-based stats. Identities = 204/565 (36%), Positives = 306/565 (54%), Gaps = 31/565 (5%) Query: 22 IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDS 80 V ++ L I +E P+D +HG L+TNAAM L+R +P IAE I+ + ++ Sbjct: 25 GLVSREELPAITLEVPKDKSHGDLATNAAMQLTRIAKKNPRQIAEAILEHLDTAKASIEK 84 Query: 81 VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140 IAG GFIN L YL I++ + G YGR IG+G KV +EFVSANPTG +H+GH Sbjct: 85 AEIAGPGFINFTLDKGYLYPIVALVQEQGDNYGRITIGEGQKVQMEFVSANPTGSLHLGH 144 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R A VGD L +++ ++GYEVTREYYINDAG Q+ L S+ RY Q L D+++PE Sbjct: 145 ARGAAVGDALCNVLDYAGYEVTREYYINDAGNQVVNLIKSLEARYLQEL-GQDAEMPEDG 203 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G +K KEL + LL+ + +++ ++ + I+ DL + D + Sbjct: 204 YHGEDIKGFAKELVAEKGDSLLSMSPGERTAFFREFGLEKELGKIKRDLNRFRVHFDEWF 263 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE + + + ++ L +G YE R+T GDD Sbjct: 264 SETSLY--EDGLVEKSLEELRSKGEAYE----------------KDGATWLRTTDYGDDK 305 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR L+K+DG+YTY D+AY + KYERG+D ++ + G+DH GYV R++A A+ + Sbjct: 306 DRVLVKNDGTYTYLTPDIAYHRNKYERGYDKILNIWGADHHGYVPRMKAAMEALGNDPDK 365 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + VL+ ++V L++DG +KMSKR G +T+ ++DEVG D++R+ R LDFD Sbjct: 366 LIVLIAQMVSLFQDGEKVKMSKRTGKAVTMEDLMDEVGVDAIRYFFTMRSMDSHLDFDMD 425 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500 S ENPVFYVQYA+AR S+FRQA++ +L P + E ++ Sbjct: 426 LAVSTSNENPVFYVQYAHARICSVFRQAEEQG----INLLPLAEVNLSVLTAEHEYDILR 481 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 + E P+ + A P++L Y+Y+LAS FH ++ R V + T RL Sbjct: 482 KIGELPQEVSLAADNYAPHRLIRYVYELASSFHSYYRAER-------VITEDADQTQARL 534 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 L+ AV ++I + L ++GV +P M Sbjct: 535 ALLGAVRTVIANVLRLMGVSAPERM 559 >gi|313617044|gb|EFR89624.1| arginyl-tRNA synthetase [Listeria innocua FSL S4-378] Length = 556 Score = 586 bits (1511), Expect = e-165, Method: Composition-based stats. Identities = 210/587 (35%), Positives = 327/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + + +L ++K+ + + +E+ + I++E P+D HG STN AM L+R Sbjct: 1 MNVMQENQIKLIEHIKQAVVQAVGLEETEVPEILLEVPKDKKHGDYSTNIAMQLARVAKK 60 Query: 60 DPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IV +K D + V IAG GFIN YL +YL ++ I+ +YG + G Sbjct: 61 APRQIAESIVPELKKDSKLIKEVEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG K IEFVSANPTG +H+GH R A +GD+LA++M +G++V+REYYINDAG QIN L Sbjct: 121 KGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLV 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LS RY +AL +++ PE Y G + +GK+LA KY + +N EE+ + + ++ Sbjct: 181 LSAEARYFEAL-GLEAEFPEDGYRGSDIIALGKDLAAKYGDKYVNASEEERRSVFRVDAL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 +R DL+ + D + SE + + + + ++ L GY+YE Sbjct: 240 AFETGKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 R+T DD DR L+KSDGSYTYF D+AY K ERGFD +I + G+ Sbjct: 288 ------QDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R+ A A+ Q+ V + +LV L+ DG+ +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ R + ++FD K S +NPV+YVQYA+AR SI R K+ ++ D Sbjct: 402 LDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVSKD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 +++ E+E+D L+ L E+ V+ A + + P+++ YL DLA+ FH ++ Sbjct: 462 -ANMSLLETEAEYD-----LLKVLGEFADVVAEAAVKRAPHRIVRYLNDLATAFHRFYNS 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N ++T RL L+ + +GL ++GV +P +M Sbjct: 516 N------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 556 >gi|329930208|ref|ZP_08283821.1| arginine--tRNA ligase [Paenibacillus sp. HGF5] gi|328935230|gb|EGG31711.1| arginine--tRNA ligase [Paenibacillus sp. HGF5] Length = 559 Score = 586 bits (1511), Expect = e-165, Method: Composition-based stats. Identities = 203/563 (36%), Positives = 304/563 (53%), Gaps = 31/563 (5%) Query: 24 VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDSVF 82 V ++ L I +E P+D +HG L+TN AM L+R +P IAE I+ + ++ Sbjct: 27 VSREELPAITLEVPKDKSHGDLATNVAMQLTRIAKKNPRQIAEAILEHLDTAKASIEKAE 86 Query: 83 IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 IAG GFIN L YL I++ + G YGR G+G KV +EFVSANPTG +H+GH R Sbjct: 87 IAGPGFINFTLDKGYLYPIVALVQEQGDNYGRIATGEGQKVQMEFVSANPTGSLHLGHAR 146 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202 A VGD L +++ F+GYEVTREYYINDAG Q+ L S+ RY Q L D+++PE Y Sbjct: 147 GAAVGDALCNVLDFAGYEVTREYYINDAGNQVVNLVKSLEARYLQEL-GQDAEMPEDGYH 205 Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262 G +K KEL + LL+ + ++ + ++ + I+ DL + D + SE Sbjct: 206 GEDIKGFAKELVAEKGDSLLSMDPGERTAFLRQFGLEKELGKIKRDLNRFRVHFDEWFSE 265 Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322 + + + ++ L +G YE R+T GDD DR Sbjct: 266 TSLY--EDGLVEKSLEELKAKGEAYE----------------KDGATWLRTTDYGDDKDR 307 Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 L+K+DG+YTY D+AY + KYERG+D ++ + G+DH GYV R++A A+ ++ Sbjct: 308 VLVKNDGTYTYLTPDIAYHRNKYERGYDKILNIWGADHHGYVPRMKAAMEALGNDPDKLI 367 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 VL+ ++V L++DG +KMSKR G +T+ ++DEVG D++R+ R LDFD Sbjct: 368 VLIAQMVSLFQDGEKVKMSKRTGKAVTMEDLMDEVGVDAIRYFFTMRSMDSHLDFDMDLA 427 Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 S ENPVFYVQYA+AR S+FRQA++ L P + E ++ + Sbjct: 428 VSTSNENPVFYVQYAHARICSVFRQAEEQG----VSLLPLADVNLSVLTAEHEYDILRKM 483 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 E P+ + A P++L Y+Y+LAS+FH ++ R V + T RL L Sbjct: 484 GELPQEVSLAAENYAPHRLIRYVYELASLFHSYYRAER-------VITEDANQTQARLAL 536 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 + AV ++I + L ++GV +P M Sbjct: 537 LGAVRTVIANVLRLMGVSAPERM 559 >gi|261403996|ref|YP_003240237.1| arginyl-tRNA synthetase [Paenibacillus sp. Y412MC10] gi|261280459|gb|ACX62430.1| arginyl-tRNA synthetase [Paenibacillus sp. Y412MC10] Length = 559 Score = 586 bits (1510), Expect = e-165, Method: Composition-based stats. Identities = 202/563 (35%), Positives = 304/563 (53%), Gaps = 31/563 (5%) Query: 24 VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDSVF 82 V ++ L I +E P+D +HG L+TN AM L+R +P IAE I+ + ++ Sbjct: 27 VSREELPAITLEVPKDKSHGDLATNVAMQLTRIAKKNPRQIAEAILEHLDTAKASIEKAE 86 Query: 83 IAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCR 142 IAG GFIN L YL I++ + G YGR G+G KV +EFVSANPTG +H+GH R Sbjct: 87 IAGPGFINFTLDKGYLYPIVALVQEQGDNYGRIASGEGQKVQMEFVSANPTGSLHLGHAR 146 Query: 143 CAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYP 202 A VGD L +++ F+GYEVTREYYINDAG Q+ L S+ RY Q L D+++PE Y Sbjct: 147 GAAVGDALCNVLDFAGYEVTREYYINDAGNQVVNLVKSLEARYLQEL-GQDAEMPEDGYH 205 Query: 203 GVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262 G +K KEL + LL+ ++ ++ + ++ + I+ DL + D + SE Sbjct: 206 GEDIKGFAKELVAEKGDSLLSMDPDERTAFLRQFGLEKELGKIKRDLNRFRVHFDEWFSE 265 Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322 + + + ++ L +G YE R+T GDD DR Sbjct: 266 TSLY--EDGLVEKSLEELKAKGEAYE----------------KDGATWLRTTDYGDDKDR 307 Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 L+K+DG+YTY D+AY + KYERG+D ++ + G+DH GYV R++A A+ ++ Sbjct: 308 VLVKNDGTYTYLTPDIAYHRNKYERGYDKILNIWGADHHGYVPRMKAAMEALGNDPDKLI 367 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 VL+ ++V L++DG +KMSKR G +T+ ++DEVG D++R+ R LDFD Sbjct: 368 VLIAQMVSLFQDGEKVKMSKRTGKAVTMEDLMDEVGVDAIRYFFTMRSMDSHLDFDMDLA 427 Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 S ENPVFYVQYA+AR S+FRQA++ P + E ++ + Sbjct: 428 VSTSNENPVFYVQYAHARICSVFRQAEEQG----VSFLPLADVNLSVLTAEHEYDILRKM 483 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQL 562 E P+ + A P++L Y+Y+LAS+FH ++ R V + T RL L Sbjct: 484 GELPQEVSLAAENYAPHRLIRYVYELASLFHSYYRAER-------VITEDANQTQARLAL 536 Query: 563 VHAVASIINSGLNIIGVESPNEM 585 + AV ++I + L ++GV +P M Sbjct: 537 LGAVRTVIANVLRLMGVSAPERM 559 >gi|313622316|gb|EFR92809.1| arginyl-tRNA synthetase [Listeria innocua FSL J1-023] Length = 556 Score = 585 bits (1509), Expect = e-165, Method: Composition-based stats. Identities = 210/587 (35%), Positives = 327/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + + +L ++K+ + + +E+ + I++E P+D HG STN AM L+R Sbjct: 1 MNVMQENQIKLIEHIKQAVVQAVGLEETEVPEILLEVPKDKKHGDYSTNIAMQLARVAKK 60 Query: 60 DPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IV +K D + V IAG GFIN YL +YL ++ I+ +YG + G Sbjct: 61 APRQIAESIVPGLKKDSKLIKEVEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG K IEFVSANPTG +H+GH R A +GD+LA++M +G++V+REYYINDAG QIN L Sbjct: 121 KGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMKMAGFDVSREYYINDAGNQINNLV 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LS RY +AL +++ PE Y G + +GK+LA KY + +N EE+ + + ++ Sbjct: 181 LSAEARYFEAL-GLEAEFPEDGYRGSDIIALGKDLAAKYGDKYVNASEEERRSVFRVDAL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 +R DL+ + D + SE + + + + ++ L GY+YE Sbjct: 240 AFETGKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 R+T DD DR L+KSDGSYTYF D+AY K ERGFD +I + G+ Sbjct: 288 ------QDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R+ A A+ Q+ V + +LV L+ DG+ +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ R + ++FD K S +NPV+YVQYA+AR SI R K+ ++ D Sbjct: 402 LDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVSKD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 +++ E+E+D L+ L E+ V+ A + + P+++ YL DLA+ FH ++ Sbjct: 462 -ANMSLLETEAEYD-----LLKVLGEFADVVAEAAVKRAPHRIVRYLNDLATAFHRFYNS 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N ++T RL L+ + +GL ++GV +P +M Sbjct: 516 N------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 556 >gi|289435829|ref|YP_003465701.1| hypothetical protein lse_2468 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172073|emb|CBH28619.1| argS [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 556 Score = 585 bits (1509), Expect = e-165, Method: Composition-based stats. Identities = 211/587 (35%), Positives = 325/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + + +L ++K+ + + +E + I++E P+D HG STN AM L+R Sbjct: 1 MNVMQENQVKLIQHIKQAVVQAVGLEAAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKK 60 Query: 60 DPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IV +K D + V IAG GFIN YL +YL ++ I+ YG++ G Sbjct: 61 APRQIAESIVPELKKDNKLIKEVEIAGPGFINFYLDNAYLTDLVPVILTEDDAYGKSDFG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG K IEFVSANPTG +H+GH R A +GD+LA++M +GY V+REYYINDAG QIN L Sbjct: 121 KGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMTMAGYNVSREYYINDAGNQINNLV 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LS RY +AL ++D PE Y G + +GK+LA KY + ++ EE+ + + ++ Sbjct: 181 LSAEARYFEAL-GLEADFPEDGYRGADIISLGKDLAAKYGDKYVSTSEEERRSVFRVDAL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 +R DL+ + D + SE + + + + ++ L GY+YE Sbjct: 240 DFETDKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 R+T DD DR L+KSDGSYTYF D+AY K ERGFD +I + G+ Sbjct: 288 ------QDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R+ A A+ Q+ V + +LV L+ DG+ +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ R + ++FD K S +NPV+YVQYA+AR SI R K+ D+ + Sbjct: 402 LDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRAGKEQNLDVSKE 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 +++ E+E+D L+ L E+ V+ A + + P+++ YL DLA+ FH ++ Sbjct: 462 -ADMSLLQTEAEYD-----LLKVLGEFADVVAEAAVKRAPHRIVRYLNDLAAAFHRFYNS 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N ++T RL L+ + +GL ++GV +P +M Sbjct: 516 N------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 556 >gi|254831015|ref|ZP_05235670.1| arginyl-tRNA synthetase [Listeria monocytogenes 10403S] Length = 556 Score = 585 bits (1508), Expect = e-165, Method: Composition-based stats. Identities = 210/587 (35%), Positives = 326/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + + +L ++K+ + + +E+ + I++E P+D HG STN AM L+R Sbjct: 1 MNVMQENQIKLVEHIKQAVVQAVGLEEAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKK 60 Query: 60 DPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IV +K D + V IAG GFIN YL +YL ++ I+ +YG + G Sbjct: 61 APRQIAESIVPELKKDNKLIKEVEIAGPGFINFYLDNAYLTDLVPVILTEDKKYGESDFG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG K IEFVSANPTG +H+GH R A +GD+LA++M +G++V+REYYINDAG QIN L Sbjct: 121 KGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMNMAGFDVSREYYINDAGNQINNLV 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LS RY +AL +S+ PE Y G + +GK+LA KY + +N EE+ + + ++ Sbjct: 181 LSAEARYFEAL-GLESEFPEDGYRGADIISLGKDLAAKYGDKYVNASEEERRSVFRVDAL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 +R DL+ + D + SE + + + + ++ L GY+YE Sbjct: 240 AFETGKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 R+T DD DR L+K+DGSYTYF D+AY K ERGFD +I + G+ Sbjct: 288 ------QDGATWLRTTDFEDDKDRVLIKTDGSYTYFLPDIAYHLNKLERGFDVLIDIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R+ A A+ Q+ V + +LV L+ DG+ +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ R + ++FD K S +NPV+YVQYA+AR SI R K+ ++ D Sbjct: 402 LDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRSGKEQGLEVTKD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 +++ E+E+D L+ L E+ V+ A + P+++ YL DLA+ FH ++ Sbjct: 462 -ADMSLLQTEAEYD-----LLKVLGEFADVVAEAAAKRAPHRIVRYLNDLATAFHRFYNS 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N ++T RL L+ + +GL ++GV +P +M Sbjct: 516 N------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 556 >gi|282857140|ref|ZP_06266386.1| arginine--tRNA ligase [Pyramidobacter piscolens W5455] gi|282585075|gb|EFB90397.1| arginine--tRNA ligase [Pyramidobacter piscolens W5455] Length = 559 Score = 584 bits (1507), Expect = e-165, Method: Composition-based stats. Identities = 209/581 (35%), Positives = 318/581 (54%), Gaps = 31/581 (5%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + + L+ I + + L + ERP+ HG +TNAAM RPLG P +AE Sbjct: 8 LKALVWGALEAIAREKGKDPASLGELHFERPKQENHGDWATNAAMQNCRPLGCKPRDLAE 67 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 I RI D + V +AG GFIN YLS ++ I+ ++ +G +YGR +GKG K +E Sbjct: 68 DIARRIGSDRRIRRVEVAGPGFINFYLSNLWMGDIVRDVLAAGSDYGRVDLGKGRKAQVE 127 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+HVGH R A VGD ++++F+G+ V +EYY+NDAG Q+N L S RY Sbjct: 128 FVSANPTGPLHVGHGRGAAVGDVTGNILSFAGWNVEKEYYVNDAGLQMNILGRSTQSRYF 187 Query: 187 QALY-NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245 + L PE Y G Y+ + +E+ D E L P E+ LP + Y+ +++ I Sbjct: 188 ELLGRPEKFPFPEESYKGRYIYDIAQEVVDARGEEFLERPLEESLPFFRTYAAGRILEQI 247 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 +++L + D F SE + D + + L +G++YE Sbjct: 248 KNELGEFGVTFDNFFSEKSLY--DRDLVAAAVQTLKERGHLYE----------------Q 289 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365 + L FRST GDD DR L++S+G TYF +D+AY K K++RGF+ +I V G+DH GYV Sbjct: 290 DEALWFRSTEYGDDKDRVLMRSNGVPTYFTSDIAYHKEKFDRGFERVIDVWGADHHGYVP 349 Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425 R++A A+ + +LL + V L RDG +KMS R+G F+ L+ VV EVG D+ R+ Sbjct: 350 RMKAAIEALGYDPKKFTILLIQFVNLLRDGEQVKMSTRSGQFVELQEVVREVGVDAARYY 409 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNV 484 L R++ LDFD K QS +NPV+YVQYA+AR SI ++A + + F +V Sbjct: 410 FLMRRSDSHLDFDLELAKSQSADNPVYYVQYAHARLCSILQKAAEKGIAVPGVSAFDPDV 469 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 I E +L LA++P + A EP+++ Y+Y+LA FH ++++G Sbjct: 470 IAT-----PEEKRLFTKLAQFPEEVGRAAADLEPHRIVSYVYELAGDFHSYYNNGGR--- 521 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + L L +V A+ ++I + L ++G+ +P +M Sbjct: 522 ---ILEESGALRDSHLLMVAAIRTVIANALRLLGISAPEKM 559 >gi|315283742|ref|ZP_07871832.1| arginyl-tRNA synthetase [Listeria marthii FSL S4-120] gi|313612612|gb|EFR86664.1| arginyl-tRNA synthetase [Listeria marthii FSL S4-120] Length = 556 Score = 584 bits (1506), Expect = e-164, Method: Composition-based stats. Identities = 210/587 (35%), Positives = 320/587 (54%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + + +L ++K+ + + +E+ + I++E P+D HG STN AM L+R Sbjct: 1 MNVMQENQIKLIEHIKQAVVQAVGLEETEVPEILLEVPKDKKHGDYSTNIAMQLARVAKK 60 Query: 60 DPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IV +K D + V IAG GFIN YL +YL ++ I+ +YG + G Sbjct: 61 APRQIAESIVPELKKDNKLIKEVEIAGPGFINFYLDNAYLTDLVPVILKEDEKYGESDFG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG K IEFVSANPTG +H+GH R A +GD+LA++M+ +G++V+REYYINDAG QIN L Sbjct: 121 KGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMSVAGFDVSREYYINDAGNQINNLV 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LS RY +AL +S+ PE Y G + +GK+LA KY + +N EE+ + + ++ Sbjct: 181 LSAEARYFEAL-GLESEFPEDGYRGADIISLGKDLAAKYGDKYVNASEEERRSVFRVDAL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 +R DL+ + D + SE + + + + ++ L GY+YE Sbjct: 240 AFETGKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 R+T DD DR L+KSDGSYTYF D+AY K ERGFD +I + G+ Sbjct: 288 ------QDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R+ A A+ Q+ V + +LV L+ DG+ +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVTMRDLIEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ R + ++FD K S +NPV+YVQYA+AR SI R K+ D Sbjct: 402 LDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRSGKEQ------D 455 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L +E L+ L E+ V+ A + P+++ YL DLA+ FH ++ Sbjct: 456 LEVTEAADMSLLQTEAEYDLLKVLGEFADVVAEAAAKRAPHRIVRYLNDLAAAFHRFYNS 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N ++T RL L+ + +GL ++GV +P +M Sbjct: 516 N------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 556 >gi|330993304|ref|ZP_08317240.1| Arginyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1] gi|329759706|gb|EGG76214.1| Arginyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1] Length = 601 Score = 583 bits (1504), Expect = e-164, Method: Composition-based stats. Identities = 263/601 (43%), Positives = 376/601 (62%), Gaps = 23/601 (3%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 LFA + + +++ L+ I + L R+ + RD AHG L+TNAA+++S+ P Sbjct: 5 LFARYLTHVRDALRTIMP--DLPDAALARVEVTPTRDPAHGDLATNAALVISKAARRRPA 62 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 IA +V + P + +AG GF+N++L+P+ + + +++ +G YG + G G K Sbjct: 63 EIAAGLVTALATVPGIARAEVAGPGFVNMHLTPAVWQGVARAVLAAGEGYGTSTAGNGVK 122 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VN+E+VSANPTGPMHVGHCR AVVGD LA+L+A +GY VT+EYYINDAGAQ+ LA + + Sbjct: 123 VNVEYVSANPTGPMHVGHCRGAVVGDVLANLLAKAGYAVTKEYYINDAGAQVIALAWATY 182 Query: 183 WRYQQALYNNDSD------LPEGY--YPGVYLKHVGKELADKYSSELLN-----FPEEKW 229 WRY QAL + S+ +P G Y G YL VG+ LA+++ L W Sbjct: 183 WRYLQALGTSVSEAEFAQSVPGGAIQYGGDYLVPVGRALAERHGDALAAPGLRPAEPALW 242 Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 L VK +V MM +IR+DL AL + HD+F SE I L +G +YEG Sbjct: 243 LDTVKTEAVDTMMGMIREDLAALGVHHDVFTSEAKILA--DGETDRAIAALDAKGLIYEG 300 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349 +L PPK K + R Q LFRST GDDVDRPL KSDGS TYFA D+ Y K RG Sbjct: 301 VLEPPKGKLPDDWEA-RPQTLFRSTEFGDDVDRPLRKSDGSNTYFANDIGYHADKIRRGA 359 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEK-KAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 D ++ V G+DH GYV R++A AA++ + ++VLLC++VR+ RDG P++MSKRAG F+ Sbjct: 360 DVLVDVWGADHGGYVTRMKAAVAALATDGRPVLDVLLCQIVRIVRDGQPVRMSKRAGTFV 419 Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 TLR ++DEVG D+VRF ML RK ++FD +V QS++NPVFYVQYA+ARCRS+ R A Sbjct: 420 TLRDLIDEVGRDAVRFTMLTRKADAQMEFDLDQVVAQSRDNPVFYVQYAHARCRSVLRAA 479 Query: 469 KDIFPDLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 ++ FDL +++ +EL L+ +A++PR++E+A A EP+++AFY Sbjct: 480 AEMVEKGVFDLSTTPASLGDADLSGLTSDAELALLRRMAQWPRMVESAASAHEPHRIAFY 539 Query: 525 LYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 L +LAS FH W+ GR++ LRF+Q ++ T M+L LV A A+++ SG+ ++GV+ E Sbjct: 540 LNELASDFHALWNRGRDDATLRFLQEHDVATTRMKLALVEATATVLRSGMKVLGVQPVEE 599 Query: 585 M 585 M Sbjct: 600 M 600 >gi|297585470|ref|YP_003701250.1| arginyl-tRNA synthetase [Bacillus selenitireducens MLS10] gi|297143927|gb|ADI00685.1| arginyl-tRNA synthetase [Bacillus selenitireducens MLS10] Length = 555 Score = 583 bits (1503), Expect = e-164, Method: Composition-based stats. Identities = 200/587 (34%), Positives = 316/587 (53%), Gaps = 34/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIE-RPRDCAHGHLSTNAAMILSRPLGL 59 M D +LK L + + + K+ V+ P+D +HG ++N AM L+R Sbjct: 1 MSQVEDIKDQLKTELVQAVVEAGLAKEEEIPEVVIETPKDKSHGDYASNLAMQLARVAKK 60 Query: 60 DPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE I A + ++ V++V IAG GF+N + YL ++ +++ ++G +G Sbjct: 61 APKQIAEDIQANLDLEAASVETVEIAGPGFLNFTMKKDYLADVVKAVLAKQDDFGSTDVG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G K+ +EFVSANPTG +H+GH R A VGD L ++ +GY+VTREYYINDAG QI+ LA Sbjct: 121 NGKKIQVEFVSANPTGTLHLGHARGAAVGDALCHILDKAGYDVTREYYINDAGNQIDNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LS+ RY QAL ++D+PE Y G + +EL D Y + +++ + Sbjct: 181 LSLEARYLQAL-GEEADMPEDGYQGKDIIGFAEELVDTYGDRFKDADPANRQAFFREFGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + +++DL + D++ SE + + + +I+++L + YE Sbjct: 240 KRELDKLKNDLNDYRVHFDVWFSETSVY--ENGQVEEILEDLKARDKTYEH--------- 288 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 FRST GDD DR L+K DGSYTY D+AY K++RGFD +I + G+ Sbjct: 289 -------EGATWFRSTDYGDDKDRVLVKGDGSYTYLTPDIAYHNDKFKRGFDEVINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ + Q++V + ++V L+ +G +KMSKR G +T+R +++EVG Sbjct: 342 DHHGYIARMKAAVQALGYDEEQLSVQIIQMVNLFENGEKVKMSKRTGKAVTMRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ R LDFD K QS ENPVFYVQYA+AR S+ RQAK+ + D Sbjct: 402 IDATRYFFAMRAADTHLDFDLDLAKSQSNENPVFYVQYAHARICSMIRQAKEKGFEPDPS 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 E L+ L E+P + +A + P+++ Y+++LA H ++ Sbjct: 462 ------ADLTKLTSEKEHDLMKKLGEFPEAVADAASRRLPHRITNYVHELAQALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ LT RL LV AV + +GL+++GV +P +M Sbjct: 516 DK-------VITDDEALTKARLALVEAVRITLRNGLSLVGVSAPEKM 555 >gi|147679179|ref|YP_001213394.1| arginyl-tRNA synthetase [Pelotomaculum thermopropionicum SI] gi|146275276|dbj|BAF61025.1| arginyl-tRNA synthetase [Pelotomaculum thermopropionicum SI] Length = 565 Score = 583 bits (1503), Expect = e-164, Method: Composition-based stats. Identities = 194/580 (33%), Positives = 319/580 (55%), Gaps = 31/580 (5%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + L L+ ++ + +E PR+ HG +TN A++L+RP + P AE Sbjct: 16 LADALVRALQAARRSGAIKVDEVPDFTVEVPREKEHGDFATNLALLLARPARMAPRRAAE 75 Query: 67 LIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 ++ + V IAG GFIN YL+P+++ + L I+ G +YGR GKG KV + Sbjct: 76 ILAQNFSQTGTWVERVEIAGPGFINFYLNPAWVYQALPRIIRLGEDYGRVNQGKGKKVQV 135 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTG +H+G+ R A +GD++A+++ F+GY+VTRE+YINDAG QI LS+ RY Sbjct: 136 EFVSANPTGLLHMGNARGAALGDSIAAILEFAGYDVTREFYINDAGNQIENFGLSLEARY 195 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245 Q L D +PEG Y G L ++ L P + + +++ + I Sbjct: 196 MQ-LMGRDVPVPEGGYHGEDLVKTVRDFIAVNGDRHLALPPGERRAALVKFALADKLGAI 254 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 + L+ + +D++ SE H D ++D ++ L GY+YE Sbjct: 255 KKTLEEFGVHYDVWFSEQSLH--DSGAVQDTLNYLREMGYIYEN---------------- 296 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365 L F++T G D D +++S+G TYFA+D+AY + K++RGF+ +I + G+DH G+V Sbjct: 297 ENALWFKATSFGADKDEVVVRSNGVPTYFASDIAYHRNKFQRGFEWVINIWGADHHGHVP 356 Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425 R++A AA+ A ++V++ +LVRLY+ G ++MSKR+G F+TL +++EVG D+ R+ Sbjct: 357 RMKAAVAALGYDPAALDVVIMQLVRLYKGGELVRMSKRSGQFVTLEELMEEVGRDAARYF 416 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 + R + LDFD + +S ENPV+Y+QYA+AR SI RQ ++ ++ + + Sbjct: 417 FVMRSSDSHLDFDLDLARAESNENPVYYIQYAHARISSILRQLEERGEEVP----DPSQV 472 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 + EL L LA++P + +A P ++A YL++LA + H ++ R Sbjct: 473 DYSLLKEEQELALARKLADFPEEVSSAARGLAPQRIARYLHELAGLLHSFYNSHR----- 527 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V ++R+L+ RL LV A + + L ++G+ +P M Sbjct: 528 --VITSDRELSRARLVLVSATRITLRNALGLLGLSAPERM 565 >gi|326388873|ref|ZP_08210455.1| arginyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370] gi|326206473|gb|EGD57308.1| arginyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370] Length = 589 Score = 583 bits (1502), Expect = e-164, Method: Composition-based stats. Identities = 260/586 (44%), Positives = 353/586 (60%), Gaps = 16/586 (2%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 LFA+F++ + L ++ + + + E PRD AHG L+TNAAM+L++P G +P Sbjct: 15 LFAEFAAVIDAALNALETAGTLPGGLARGAVTTEPPRDPAHGDLATNAAMVLAKPAGTNP 74 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +A +VA ++ DP V + IAG GFINL L P L I G +YGR+ +G G+ Sbjct: 75 RALATALVAELEKDPRVTAAEIAGPGFINLRLVPGAWLDELGLISALGADYGRSTVGGGS 134 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 VN+E+VSANPTGPMH+GHCR AVVGD LASL+ F+G++V REYYINDAG Q++ LA SV Sbjct: 135 IVNVEYVSANPTGPMHMGHCRGAVVGDALASLLDFAGHKVVREYYINDAGGQVDVLARSV 194 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 RY++AL + +PEG YPG YL VG+ LA ++ PE WL + + +V AM Sbjct: 195 HLRYREALGQDVGAIPEGLYPGDYLVPVGQALAAEFGDRYAAAPEADWLVLFRTRAVAAM 254 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 M +IR DL L I HD+F SE + + L VY+G L PK K Sbjct: 255 MDMIRADLALLGIHHDVFSSEAELQAAGKPAAAEAW--LREHDLVYDGQLEAPKGKVADD 312 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 + L FRST GDD DRP+ KSDGS+TYF ADLAY K E D ++ + G+DH+ Sbjct: 313 WEPVELPL-FRSTRFGDDQDRPIRKSDGSWTYFGADLAYHFQKAET-ADALVDIWGADHA 370 Query: 362 GYVKRLEAVAAAVSEKKAQ---INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 G VKR++A AA++ + + + L ++V+L RDG P+KMSKRAG F+TL VV EVG Sbjct: 371 GTVKRIKAAVAALTGAQGKPKPFEIKLVQMVQLLRDGQPVKMSKRAGTFVTLADVVREVG 430 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D VRF ML RK +DFDF KV E SK+NPVFYVQY +AR S R+A + Sbjct: 431 KDVVRFTMLTRKPDAQMDFDFAKVVEASKDNPVFYVQYCHARVCSTLRKAAGEGFAPNAA 490 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 EL LI A++PR++E A A+EP+++AF+LYDLA+ FH +W+ Sbjct: 491 ELA--------LLGDEELALIRLAAQFPRIVEGAAAAREPHRIAFFLYDLAAGFHAYWNL 542 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 G + P R++ A+N LT RL L V ++ +GL I+GV + E Sbjct: 543 GNDRPDKRYIVADNPALTGARLFLAAQVGQVVRNGLAILGVTAAEE 588 >gi|284048956|ref|YP_003399295.1| arginyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731] gi|283953177|gb|ADB47980.1| arginyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731] Length = 552 Score = 582 bits (1501), Expect = e-164, Method: Composition-based stats. Identities = 214/585 (36%), Positives = 321/585 (54%), Gaps = 33/585 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + + + + +++ K+ + + +V+ P A G +TN A+ +R Sbjct: 1 MDMKKVLAEAVADAVRKAIEAGKLSQGEMAPVVLTVPPQKAFGDFATNFALQAARNFHCA 60 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P IA + + P VD V IAG GF+N YL +L + L +I+ G YG G Sbjct: 61 PRVIAAAVQEYLDC-PSVDKVEIAGPGFLNFYLKEDWLGESLRAILDKGENYGNLPPKNG 119 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 K+ IE+VSANPTGP+HVGH R A VG LASLM +GY+VTREYYINDAG Q++ LALS Sbjct: 120 EKIQIEYVSANPTGPLHVGHGRGAAVGSALASLMKAAGYDVTREYYINDAGNQMHNLALS 179 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V RY + L++ PE Y G +K + + KY + ++ PEE+ L + + + Sbjct: 180 VNARYLE-LFDIPCQFPENGYHGEDIKVTARRIKAKYGDKFIHMPEEERLEQFQTLAKEE 238 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 + +++DL+A N + D++ SE H D I ++D L +GYVYE Sbjct: 239 KLAALKEDLEAFNCEFDVWFSEQSLH--DADKIHQVVDELQEKGYVYE------------ 284 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 FRST GDD DR +++ +G TYFAAD+AY + K++RGFD +I + G+DH Sbjct: 285 ----KDGAKWFRSTAFGDDKDRVVIRDNGVSTYFAADIAYHQNKFQRGFDRVINLWGADH 340 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY+ R++A A+ +++ VL+ ++V LYR+G +KMSKR G +TL +++EVG+D Sbjct: 341 HGYIPRVKAAMEALGYDPSRLEVLILQMVALYRNGELVKMSKRTGKSVTLNELIEEVGTD 400 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 + RF + R LDFD E S +NPV+YVQYA+AR SI RQ ++ L D Sbjct: 401 AARFFFIMRSMDSQLDFDLTLATEHSNDNPVYYVQYAHARICSILRQMEEEKIALRKD-- 458 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 + E+ LI L +Y +IE A + P+K+A Y+YDLA +FH ++ R Sbjct: 459 ----CDLSVLKEPIEVDLIKKLNDYEELIETAAAERAPHKIAHYVYDLAGLFHSFYNQCR 514 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V + + RL L+ AV + + GL I+GV +P+ M Sbjct: 515 -------VLGVDPAVQQARLALITAVGNTLRHGLKILGVSAPDHM 552 >gi|121535669|ref|ZP_01667474.1| arginyl-tRNA synthetase [Thermosinus carboxydivorans Nor1] gi|121305773|gb|EAX46710.1| arginyl-tRNA synthetase [Thermosinus carboxydivorans Nor1] Length = 556 Score = 582 bits (1500), Expect = e-164, Method: Composition-based stats. Identities = 205/584 (35%), Positives = 314/584 (53%), Gaps = 33/584 (5%) Query: 6 DFSSRLKNYLKEIDCKIKVE----KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 D L + + + L +++E P G +TN AM +R +P Sbjct: 2 DIKQLLTETIAKAAREAMAAGAFRADELPPVMLEVPPQKEFGDYATNFAMQAARAAKTNP 61 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 IA+ IV RI+ P ++ IAG GFIN YL P +L +L I+ +G YG G+G Sbjct: 62 RVIAQAIVDRIQA-PWLEKAVIAGPGFINFYLKPGWLYDLLQRILAAGENYGNTDYGRGR 120 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 +V +EFVSANPTGP+HVGH R A VG L +L+ +GY+V E+YINDAG+QI+ LA SV Sbjct: 121 RVQVEFVSANPTGPLHVGHGRGAAVGSALVNLLRAAGYDVEAEFYINDAGSQIDHLAASV 180 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 RY + L + PE Y G + + + D+ + L + L + K+ ++ Sbjct: 181 NARYLELL-GQPVEFPEDGYRGRDIIDTAQRIIDREGARYLLVSPAERLAVFKELALSEK 239 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 + +R+DL+A + D++ SE H+ I + L + G +YE Sbjct: 240 LAALREDLEAFGVTFDVWFSERTLHQ--TGAIAATCELLKKSGDIYE------------- 284 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 L RST GDD DR +++ +G TY AAD+AY + K+ERGFD +I + G+DH Sbjct: 285 ---QDGALWLRSTAYGDDKDRVVIRDNGVPTYLAADIAYHRNKFERGFDTVINIWGADHH 341 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 GY+ R++A AA+ A++ VL+ ++V LY++G +KMSKR G +TL +++EVG D+ Sbjct: 342 GYIARVKAAIAALGYDPARLEVLILQMVSLYQNGELVKMSKRTGQGVTLAELIEEVGRDA 401 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 RF + R LDFD K ++ ENPV+Y+QYA+AR SIFRQA++ + + + Sbjct: 402 ARFFFIMRSADSQLDFDLDLAKSRTNENPVYYIQYAHARIASIFRQAEEAGIAVRPEEWT 461 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + + +E+ LI L EYP I A + P+++A Y++DLA +FH ++ R Sbjct: 462 EDKL--ACLTAETEIDLIKKLGEYPDEITAAARERAPHRIARYVHDLAGLFHAFYNQCR- 518 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L RL LV AV ++ L+I+GV +P +M Sbjct: 519 ------IIGVEPALQNARLGLVTAVQRVLRHALSILGVTAPEKM 556 >gi|323490872|ref|ZP_08096070.1| arginyl-tRNA synthetase [Planococcus donghaensis MPA1U2] gi|323395480|gb|EGA88328.1| arginyl-tRNA synthetase [Planococcus donghaensis MPA1U2] Length = 553 Score = 581 bits (1498), Expect = e-163, Method: Composition-based stats. Identities = 196/586 (33%), Positives = 322/586 (54%), Gaps = 34/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +K E K ++ + ++ + +E PRD +G +TN AM L+R Sbjct: 1 MNAVEQVQHAIKTAFAEAIEKAELTTEAVE-VQLESPRDKTNGDYATNIAMQLTRLAKKP 59 Query: 61 PLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE IVA + D +V IAG GFIN+ + YL+ ++ +++ ++YGR+ G Sbjct: 60 PRAIAEAIVANLDKDAANIQTVDIAGPGFINITIKKDYLQDVVKTVLEQKVDYGRSTAGD 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 ++ +EFVSANPTG +H+GH R + VGD+L +++ +GY+V+REYYINDAG QIN LAL Sbjct: 120 NERIQVEFVSANPTGDLHLGHARGSSVGDSLCNILDLAGYDVSREYYINDAGNQINNLAL 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ RY +AL DS +PE Y G +K + + L ++ + ++ E+ +++ ++ Sbjct: 180 SIEARYFEALGKGDS-MPEDGYRGQDIKDIAEALVQEHGDKFVSMTHEERFETFREHGLK 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 + ++ DL ++ D++ E ++ I + + L G+VYE Sbjct: 239 VELAKLQQDLADFRVEFDVWYPESSLYKN--GKIDEALAKLRENGHVYE----------- 285 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + FRST GDD DR L+K+DGSYTY D+AY + K +RGF +I V G+D Sbjct: 286 -----EDGATWFRSTTFGDDKDRVLIKNDGSYTYLMPDIAYHEDKLQRGFGKLINVWGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ R++A A+ + + V + ++V+LY+DG +KMSKR G +T+R +V+ VG Sbjct: 341 HHGYIPRMKAAIEALGYDRDTLEVSIIQMVQLYKDGEKMKMSKRTGKAVTMRELVELVGL 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+VR+ R +DFD QS ENPV+Y QY +AR SI RQA++ + Sbjct: 401 DAVRYFFAMRSGDSHMDFDLDLAVSQSNENPVYYSQYGHARISSILRQAEEQGLLASEEH 460 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 E+ ++ + ++P+VI +A + P+++ Y+ +LAS FH ++ Sbjct: 461 LNL-------LTSEKEIDVLKKIGDFPQVIADAAKQRAPHRITTYIQELASNFHSFYNAN 513 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + A+N ++T RL L+ AV + + + L +GVE+P +M Sbjct: 514 ------KVLDASNVEMTSARLALITAVKTTLANALKTVGVEAPEKM 553 >gi|313636233|gb|EFS02062.1| arginyl-tRNA synthetase [Listeria seeligeri FSL S4-171] Length = 556 Score = 581 bits (1497), Expect = e-163, Method: Composition-based stats. Identities = 209/587 (35%), Positives = 323/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + + +L ++K+ + + +E + I++E P+D HG STN AM L+R Sbjct: 1 MNVMQENQVKLIQHIKQAVVQAVGLEAAEVPEILLEVPKDKKHGDYSTNIAMQLARVAKK 60 Query: 60 DPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE IV +K D + V IAG GFIN YL +YL ++ I+ YG++ G Sbjct: 61 APRQIAESIVPELKKDNKLIKEVEIAGPGFINFYLDNAYLTDLVPVILTEDDAYGKSDFG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG K IEFVSANPTG +H+GH R A +GD+LA++M +G+ V+REYYINDAG QIN L Sbjct: 121 KGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMTMAGFNVSREYYINDAGNQINNLV 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LS RY +AL +SD PE Y G + +GK+LA KY + ++ EE+ + + ++ Sbjct: 181 LSAEARYFEAL-GLESDFPEDGYRGADIISLGKDLAAKYGDKYVSTSEEERRSVFRVDAL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 +R DL+ + D + SE + + + + ++ L GY+YE Sbjct: 240 DFETDKLRADLEEFRVSFDEWFSETSLY--EENKVLPALERLRENGYIYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 R+T DD DR L+KSDGSYTYF D+AY K ERGFD +I + G+ Sbjct: 288 ------QDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDVLIDIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R+ A A+ Q+ V + +LV L+ DG+ +KM R G +T+R +++EVG Sbjct: 342 DHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMXXRTGKSVTMRDLIEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ R + ++FD K S +NPV+YVQYA+AR SI R K+ D+ + Sbjct: 402 LDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRAGKEQNLDVSKE 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 +++ E+E+D L+ L E+ V+ A + + P+++ YL DLA+ FH ++ Sbjct: 462 -ADMSLLQTEAEYD-----LLKVLGEFADVVAEAAVKRAPHRIVRYLNDLAAAFHRFYNS 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N ++T RL L+ + +GL ++GV +P +M Sbjct: 516 N------KVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM 556 >gi|152977542|ref|YP_001377059.1| arginyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152026294|gb|ABS24064.1| arginyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98] Length = 556 Score = 580 bits (1496), Expect = e-163, Method: Composition-based stats. Identities = 201/587 (34%), Positives = 324/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K +K K ++ ++ + +++E P+D HG STN AM L+R Sbjct: 1 MNSLEQVKELIKEEIKAAVLKAELATEEQIPNVILETPKDKTHGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE ++ K ++ + IAG GFIN ++ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELITNFNKEKASIEKIEIAGPGFINFHMDNSYLTDLIPTIVKAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG K+ +EFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKIQVEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL + ++PE Y G + +GK LA+++ + E++ + Y + Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIMEIGKRLAEEFGDRYVKADEKESYEFYRQYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL + ++ D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLDSFRVKFDVWFSETSLYKN--GKIDAALAVLKERNEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRST GDD DR L+K DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EGGATWFRSTAYGDDKDRVLIKKDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ +K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYEKETLEVEIIQMVQLYQNGEKVKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLHAGGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E+ L+ L E+P + A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLVAS------EKEIDLLKKLGEFPAAVAEAAQKRLPHRITSYAFELAAALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + L ++GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRITLQNALALVGVSAPEKM 556 >gi|269792262|ref|YP_003317166.1| arginyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099897|gb|ACZ18884.1| arginyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589] Length = 559 Score = 579 bits (1494), Expect = e-163, Method: Composition-based stats. Identities = 203/581 (34%), Positives = 325/581 (55%), Gaps = 32/581 (5%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 +++ + ++ + VE +I +ERP+ G + +AAM L + G++P +A+ Sbjct: 9 LEDKIRGIVTQMAQERGVEIPGRAKIYLERPKREGQGDWACSAAMQLCKSFGVNPRELAD 68 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 I A+I DP V++V +AG GFIN+ LS ++ ++ ++ +G +YGR G G KV +E Sbjct: 69 EISAKIAEDPSVETVEVAGPGFINITLSKGWVGDLIRRVISAGADYGRVNDGGGKKVQVE 128 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+H+GH R A VGD AS+++++G+ V REYYINDAG Q+ L S RY Sbjct: 129 FVSANPTGPLHMGHGRGAAVGDITASILSYAGWNVEREYYINDAGLQMEMLGRSARSRYF 188 Query: 187 QALY-NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245 + + +++ PE Y G Y+ + +E+ D+ L + PEE+ +P+ D + + +K I Sbjct: 189 ELIGRGDEAPFPEEGYHGDYMYDIAREILDEKGPSLADLPEEEAVPLFTDLAYERTLKWI 248 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 + DL+ ++ D++ SE + GD + I+ L +GY YE Sbjct: 249 KRDLEDFGLKFDVWFSERSLYVGD--QVERTIEALKARGYAYEA---------------- 290 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365 + F+ST GD+ DR L++S+G+ TYF +D+ Y K KY+RGFD +I V G+DH GY+ Sbjct: 291 EGAIWFKSTAFGDEKDRVLIRSNGAPTYFMSDVVYHKNKYDRGFDLVIDVWGADHHGYIP 350 Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425 R+++ AA+ + VLL + V L R+G P+ MSKRAG F+TLR V+DEVG D+ RF Sbjct: 351 RMKSAVAAMGRDPEDLQVLLIQFVTLLRNGEPVSMSKRAGAFVTLRDVMDEVGVDATRFF 410 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNV 484 + R+ LDFD K S +NPV+YVQYA+AR SI R++ + D ++ Sbjct: 411 FVMRRCDSHLDFDLELAKRASSDNPVYYVQYAHARMCSIERESDARGLERPSMDDLDPSL 470 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 + EL+L +A++P I A P+++A+Y +L+ FH ++ R Sbjct: 471 LSL-----PEELRLATVIAKFPEEIRKAARDMAPHRIAYYAQELSEAFHSFYNVAR---- 521 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + R+ L+ A + + L I+GV +P M Sbjct: 522 ---IIGEEEPVRRNRMLLMEAARIALRNALGILGVSAPERM 559 >gi|296134410|ref|YP_003641657.1| arginyl-tRNA synthetase [Thermincola sp. JR] gi|296032988|gb|ADG83756.1| arginyl-tRNA synthetase [Thermincola potens JR] Length = 561 Score = 579 bits (1494), Expect = e-163, Method: Composition-based stats. Identities = 198/584 (33%), Positives = 325/584 (55%), Gaps = 31/584 (5%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L + +K + + + + + V+E PR+ HG +TN AM+L+R + P Sbjct: 8 LKDNLIEVIKIAVIKAKEAGDISFEEIPDFVLEVPRERGHGDFATNIAMLLTRQARMAPR 67 Query: 63 TIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 IAE IV ++ K D + ++ +AG GFIN YLS +L +L I G +YG + +G G Sbjct: 68 QIAEAIVKQLDKSDLPIVNIEVAGPGFINFYLSAEWLYDVLPEIEDQGAKYGYSSVGNGL 127 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 KV +EFVSANPTG +H+G+ R A +GD++ASL+A +G++V RE+YINDAG QI S+ Sbjct: 128 KVQVEFVSANPTGLLHMGNARGAALGDSMASLLAAAGFDVQREFYINDAGNQIENFGKSL 187 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 RY Q L D PE Y G + + + D+ ++ L+ ++ ++ Sbjct: 188 EARYFQLL-GRDVAFPEDGYHGQDIIDTVQGIIDREGNKYLSLDSRLRRELLVKEALNEK 246 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 + IR L +++D++ SE H D + +++ L +GY+YE Sbjct: 247 LDGIRKSLADFGVKYDVWFSEQTLH--DSGAVEQVLNELREKGYIYEH------------ 292 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 L F++T GD+ D +++S+G+ TYFAAD+AY K K++RGF +I + G+DH Sbjct: 293 ----EGALWFKATEFGDEKDEVVVRSNGTPTYFAADIAYHKNKFDRGFQWVINIWGADHH 348 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 G+V RL+ A+ ++ V++ +LVRL+R G ++MSKR+G+F+TL +V+EVG D+ Sbjct: 349 GHVNRLKGAMQALGYDPDKLQVVIMQLVRLFRGGEIVRMSKRSGEFVTLDDLVEEVGKDA 408 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 R+ + R LDFD K +S +NPV+Y+QYA+AR SIFRQ ++ + Sbjct: 409 ARYFFVMRSPDSHLDFDMDLAKSKSNDNPVYYIQYAHARICSIFRQVQESGISVP----S 464 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 I +EL+L+ LA++P + A + EP+++A YL++LA +FH ++ R Sbjct: 465 ARNINPAVLKQAAELELLRKLADFPTEVAEAAVNLEPHRMARYLHELAGIFHSFYNSNR- 523 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V ++ + RL LV +V ++ +GL ++G+ +P M Sbjct: 524 ------VMIEDKDIRDARLVLVKSVQQVLKTGLALLGLTAPERM 561 >gi|302392974|ref|YP_003828794.1| arginyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501] gi|302205051|gb|ADL13729.1| arginyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501] Length = 561 Score = 578 bits (1491), Expect = e-163, Method: Composition-based stats. Identities = 215/584 (36%), Positives = 329/584 (56%), Gaps = 31/584 (5%) Query: 3 LFADFSSRLKNYLK-EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 + D +K+ ++ +D +I D +++E PR+ HG +TN AM+L+ G+ P Sbjct: 8 IRDDLIIEIKDAIRRAVDEEILNLDNPPDDVMLEVPREEGHGDYATNIAMVLAGQAGMAP 67 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 IA++IV + V V IAG GFIN YL +L +I+ +++ +YG++ G G Sbjct: 68 RDIAQVIVDNLAELELVSKVEIAGPGFINFYLVDEWLYQIIETVLNEKEDYGKSNFGNGK 127 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 KV IEFVSANPTGP+HVGH R AV GD L ++M+ +G++V +EYYINDAG Q+ L SV Sbjct: 128 KVQIEFVSANPTGPLHVGHGRGAVAGDVLGNIMSAAGFDVAKEYYINDAGNQMELLGKSV 187 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 RYQ+ L D +PE Y G Y++ + ++ +Y + L ++ ++++ + + Sbjct: 188 ALRYQELL-GADITMPENSYQGDYIEKIAAKIETEYGDKYLTDVQDGNYEFFREFAYEQL 246 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 + I+ DL+A I+ D + SE H+ D I +++ L GY+YE Sbjct: 247 LANIKADLQAFGIEFDNWFSERKLHQED--KIGEVVAQLKEDGYLYE------------- 291 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 + L +ST GDD DR ++K +G TY AAD+AY KY+RGF+ +I V G+DH Sbjct: 292 ---EEGALWLKSTDFGDDKDRVVIKDNGVPTYLAADIAYHDNKYQRGFEEVINVWGADHH 348 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 GY+ R++A A+ + V++ ++V L RDG + MSKRAGDFITLR VVDEVG D+ Sbjct: 349 GYIARMKAAVEALGYSPEMLKVIIVQMVTLLRDGKQVSMSKRAGDFITLRDVVDEVGCDA 408 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 R+ + R LDFD KE+S ENPV+Y+QYA+AR SI D + + Sbjct: 409 ARYFYVMRSTDSHLDFDLDLAKEESAENPVYYIQYAHARICSIL----DQIKKEEIKIED 464 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + + E EL LI L +YP + + ++EP+ +A Y Y+LA+ FH ++ Sbjct: 465 VSGVDLERLDTEVELDLIQKLGDYPEELAESAKSREPHHMARYAYELAAQFHSFYNKCH- 523 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V + ++ RLQLV AV ++++ LNI+GV +P M Sbjct: 524 ------VLIQDEEVMQARLQLVLAVKQVLSNLLNILGVSAPESM 561 >gi|323702604|ref|ZP_08114266.1| arginyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574] gi|323532423|gb|EGB22300.1| arginyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574] Length = 561 Score = 578 bits (1490), Expect = e-163, Method: Composition-based stats. Identities = 207/584 (35%), Positives = 319/584 (54%), Gaps = 31/584 (5%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + A ++ L+ + + + + IVIE PR+ HG +TN AM L+R + P Sbjct: 8 IRATLAAALEKAIAKAVDEGAINPVETPEIVIEVPREKEHGDFATNLAMQLARSAKMAPR 67 Query: 63 TIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 IAE +V + + V IAG GFIN YL PS++ ++ IV YGR +G G Sbjct: 68 KIAEAVVENLDLAGTRVARVEIAGPGFINFYLEPSWVYDVVPLIVQEDRNYGRVELGNGR 127 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 KV +EFVSANPTG +H+G+ R A +GD+LA+++ F+GY V+REYYINDAG QI S+ Sbjct: 128 KVQVEFVSANPTGLLHMGNARGAALGDSLAAILDFAGYRVSREYYINDAGNQIENFGRSL 187 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 RY Q L D +PE Y G + K +K+ L+N + Y+++ Sbjct: 188 EVRYLQQL-GQDIPMPEEGYHGEDIIDTVKGYLNKHGDGLVNVDSATRRQTLAAYALKEK 246 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 + IR+ L + +D++ SE H D I I+ L +GY+YE Sbjct: 247 LTHIRNTLLDFGVVYDVWFSEQSLH--DSGAIDRTINELRERGYIYEH------------ 292 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 L F++T GD+ D +++S+G TYFAAD+AY + K+ERGFD +I + G+DH Sbjct: 293 ----ENALWFKATEFGDEKDEVVVRSNGIPTYFAADIAYHRNKFERGFDWVIDIWGADHH 348 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 G+V R++ A+ + ++ V+L +LVRL+R G ++MSKR G F+TL +++EVG D+ Sbjct: 349 GHVNRMKGSMEALGYSRDKLEVILMQLVRLFRGGEIVRMSKRTGQFVTLEELMEEVGRDA 408 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 R+ + R LDFD K Q+ +NPVFY+QYA+AR SI RQ ++ L Sbjct: 409 ARYFFVMRSPDSHLDFDLDLAKSQTNDNPVFYIQYAHARICSILRQLQEQGRQ----LPA 464 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + + +EL L+ LA++P I A P+++A YL+DLA FH ++ R Sbjct: 465 AADVDLTLLKEEAELGLLRKLADFPTEIAAAAELLAPHRIARYLHDLAGQFHSFYNSYR- 523 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V +N +L+ RL LV+ V ++ + L ++G+ +P +M Sbjct: 524 ------VITDNEELSQARLVLVNCVRIVLRNALGLLGLTAPEKM 561 >gi|83593114|ref|YP_426866.1| arginyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170] gi|109895029|sp|Q2RTG6|SYR_RHORT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|83576028|gb|ABC22579.1| arginyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170] Length = 592 Score = 578 bits (1490), Expect = e-162, Method: Composition-based stats. Identities = 260/594 (43%), Positives = 373/594 (62%), Gaps = 12/594 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +F D + + + + ++ + + R+ +E PR+ AHG ++TNAAM+L++P GL Sbjct: 1 MNVFHDIKETVLAQVAALQAEGRLPEGLETGRVAVEPPREAAHGDMATNAAMVLAKPAGL 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +AE++V ++ + + AG GFINL L P RK L +++ G +G + +G+ Sbjct: 61 APRAVAEMLVEKLVGVDGIVAAETAGPGFINLRLDPKIWRKTLKTVLTLGTAFGASTMGR 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G VN+EFVSANPTGPMHVGH R AV GD LA+L+ +G+ VTREYY+NDAGAQ+++LA Sbjct: 121 GAAVNVEFVSANPTGPMHVGHGRGAVFGDALAALLVKAGWAVTREYYVNDAGAQVDSLAR 180 Query: 180 SVFWRYQQALYNNDSDLP-------EGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232 +++ RY+ A+ + D E Y G YL V ++A + E WLP Sbjct: 181 ALYARYRVAVGDLDEAAFAAMLAAREIEYGGDYLVPVAADIAQADGTRWTTVAESDWLPA 240 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 + ++ M+ +I++DL AL + HD+F SE R + +++ +L + VY G L Sbjct: 241 FRAIGIERMLALIKEDLAALGVVHDVFTSEQALVR--AGRVDEMMTDLESRDLVYVGTLE 298 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 PPK KT + R Q LFR+T GD+VDRPL KSDGS+TYFA+D+AY K++RGF M Sbjct: 299 PPKGKTPDDWE-PRPQTLFRATGFGDEVDRPLKKSDGSWTYFASDIAYHHDKFKRGFLGM 357 Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412 I V+G+DH GYVKRL+A AVS +A+++V L +LV+L +G P+KMSKRAG FITLR Sbjct: 358 INVLGADHGGYVKRLKAAVKAVSNGEAELDVKLVQLVKLLDNGEPVKMSKRAGTFITLRE 417 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 VVDEVG D VRF+ML RKN LDFD+ +V E++++NPVFYVQYA+AR S+ R A F Sbjct: 418 VVDEVGKDVVRFIMLTRKNDAALDFDYARVTEKTRDNPVFYVQYAHARACSVARHAAQTF 477 Query: 473 PD-LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 P + E+ ++ LA +PR++E+A A EP+++AFYL ++A+ Sbjct: 478 PGRDLSAAALAATADLDLLDADEEMAMVRLLAGWPRLVESAAEAHEPHRVAFYLGEVAAA 537 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 FHG W+ G +N LRF+ + ++ RL LV AVAS+I SGL I GVE EM Sbjct: 538 FHGLWNRGNDNAELRFLLPTDEARSLARLALVQAVASVIASGLEIFGVEPVKEM 591 >gi|77918356|ref|YP_356171.1| arginyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380] gi|109895013|sp|Q3A6K6|SYR_PELCD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|77544439|gb|ABA88001.1| arginyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380] Length = 554 Score = 578 bits (1490), Expect = e-162, Method: Composition-based stats. Identities = 219/584 (37%), Positives = 320/584 (54%), Gaps = 35/584 (5%) Query: 7 FSSRLKNYLKEIDC----KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 RL+ Y+ E + ++ + I +E P HG STN AM ++R P Sbjct: 1 MKQRLRQYIGEALQACFDQQQLHSGTIPEINLEVPAHAEHGDFSTNVAMAMARAEKKAPR 60 Query: 63 TIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 IAE IVA + + V IAG GFIN YL+P +L +V G +GR G G Sbjct: 61 KIAETIVAALGEGGGMWSRVEIAGPGFINFYLTPRCWFGVLDEVVRRGDLFGRTHTGNGR 120 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 KV +EFVSANPTGP+H+GH R A GD +A+++ +GYEV REYYINDAG Q+ TL S+ Sbjct: 121 KVQVEFVSANPTGPLHIGHGRGAATGDAVAAVLGAAGYEVQREYYINDAGNQMLTLGRSL 180 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 RY++ L + P Y GVY+ + +E+ + L + PEE+ L +Y + Sbjct: 181 LLRYRELL-GETIEFPTDCYQGVYVIDLAREVLESEGERLRDLPEEEALRFFANYGGDKI 239 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 I +DL A ++ D + SE + D + I L +G YE Sbjct: 240 RAGIDEDLAAFGVRFDNWYSEQSLY--DRQEVERGIALLKERGLTYE------------- 284 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 + FR+T GDD DR L++S+G+ TYFA+D+AY K K+ERGFD +I V G+DH Sbjct: 285 ---KDGAIWFRTTDYGDDKDRVLIRSNGATTYFASDVAYHKEKFERGFDTVIDVWGADHH 341 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 GYV R++AV A + + ++L +LV L R G + MS R+G+F+TLR V+DEVG D+ Sbjct: 342 GYVPRMKAVLAGLDRNPEDLQIILVQLVNLLRGGQQVAMSTRSGEFVTLREVIDEVGRDA 401 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 RF L R++ LDFD K+QS ENPV+YVQYA+AR SI R A+D + Sbjct: 402 CRFFFLMRRSDSQLDFDLDLAKKQSTENPVYYVQYAHARVCSINRNAEDQG----VAMPE 457 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + + EL L L+ YP V++ A EP+++ FYL +LA+ FH +++ GR Sbjct: 458 LGEVDFDCLTLEDELALTKLLSRYPEVVDGAAEHFEPHRVVFYLQELAARFHSYYNKGR- 516 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V ++ ++ RL LV+ V +++++ L ++GV +P M Sbjct: 517 ------VLVDDPDVSRARLYLVNCVRTVLHNALVLLGVSAPERM 554 >gi|91206117|ref|YP_538472.1| arginyl-tRNA synthetase [Rickettsia bellii RML369-C] gi|157826450|ref|YP_001495514.1| arginyl-tRNA synthetase [Rickettsia bellii OSU 85-389] gi|109895031|sp|Q1RGY1|SYR_RICBR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|166232833|sp|A8GUI1|SYR_RICB8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|91069661|gb|ABE05383.1| Arginyl-tRNA synthetase [Rickettsia bellii RML369-C] gi|157801754|gb|ABV78477.1| arginyl-tRNA synthetase [Rickettsia bellii OSU 85-389] Length = 576 Score = 578 bits (1489), Expect = e-162, Method: Composition-based stats. Identities = 248/585 (42%), Positives = 361/585 (61%), Gaps = 9/585 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +F ++LK+ + ++ +I + IE P+D +G LS+N AMI++ + Sbjct: 1 MNIF----NKLKHDIITASTQLYNNSEIANHASIETPKDSFNGDLSSNIAMIIAAKKNVP 56 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A + P + S+ IAG GFIN + + I+ + ++ + K Sbjct: 57 PREVALKFKEILNELPYIASIEIAGPGFINFTIKADSWHTAIKDILQNESKFFEIDVDKN 116 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +NIE+VSANPTGPMH+GH R AV GD LA+++ GY VT+EYY+NDAG+QIN L + Sbjct: 117 KNINIEYVSANPTGPMHIGHARGAVYGDVLANILKKVGYPVTKEYYVNDAGSQINDLVST 176 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V RY++AL + EG YPG YL VG+ LA +Y +LLN E + IVK++++Q Sbjct: 177 VILRYREAL-GEKITITEGLYPGEYLIPVGQALAKEYGDKLLNMDELERFKIVKNFAIQK 235 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 M+ + ++DLK L ++HD+F SE H D I + L G +YEG +P PK K Sbjct: 236 MLDLNKEDLKELGVKHDVFFSEQTLH--DNGKIEKTVKLLTDMGLIYEGSVPAPKGKVHA 293 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + + +R Q LF+ST GDD DRP+ K+DGS+TYFA+DLAY K K +RG +++IYV+G+DH Sbjct: 294 EWE-NRTQELFKSTKYGDDQDRPIRKADGSWTYFASDLAYAKDKIDRGANHLIYVLGADH 352 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 SGYVKR+EA A+ +++ +++V +C+LV +G+P+KMSKR G F +++ V EVG D Sbjct: 353 SGYVKRIEATVKALGKEQVKVDVKICQLVNFVENGVPVKMSKRLGTFASVQDVNHEVGKD 412 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +RFMML R+N++ LDFD KVKEQSKENP+FYVQYA+ R SI +A + P ++ F Sbjct: 413 IIRFMMLTRENNKTLDFDLIKVKEQSKENPIFYVQYAHVRTLSILSKAMETIPQ-SYNSF 471 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 E+++I LA + + +E A EP+++AFYL +LAS FH W+ G+ Sbjct: 472 EAGTYDLSLLSSEEEIEIIKLLASWTKTLETAAKYFEPHRVAFYLINLASKFHALWNFGK 531 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 EN RF+ NN +LT RL L A+ II SGL +IGVE M Sbjct: 532 ENNDYRFIIENNVELTTARLALAKAIQKIIASGLEVIGVEPMTRM 576 >gi|228994078|ref|ZP_04153978.1| Arginyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442] gi|229000147|ref|ZP_04159716.1| Arginyl-tRNA synthetase [Bacillus mycoides Rock3-17] gi|229007668|ref|ZP_04165260.1| Arginyl-tRNA synthetase [Bacillus mycoides Rock1-4] gi|228753536|gb|EEM02982.1| Arginyl-tRNA synthetase [Bacillus mycoides Rock1-4] gi|228759479|gb|EEM08456.1| Arginyl-tRNA synthetase [Bacillus mycoides Rock3-17] gi|228765530|gb|EEM14184.1| Arginyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442] Length = 556 Score = 578 bits (1489), Expect = e-162, Method: Composition-based stats. Identities = 202/587 (34%), Positives = 323/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K +K K ++ ++ + +V+E P+D HG STN AM L+R Sbjct: 1 MNSLEQVKELIKEEIKAAVLKAELATEEQIPNVVLESPKDKTHGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE ++A K ++ + IAG GFIN Y+ SYL ++ IV +G YG G Sbjct: 61 APRMIAEELIANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPVIVTAGTNYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV +EFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL + ++PE Y G + +G+ LA+++ E++ ++Y + Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGQRLAEEFGDRYAKADEKESYEFYREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL++ ++ D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKVKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLTAGGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E+ L+ L E+P + A + P+++ Y ++LA+ H ++ Sbjct: 462 INYKLVAS------EKEVDLLKKLGEFPAAVAEAAQKRLPHRITNYAFELAAALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R L+ AV + + L ++GV +P +M Sbjct: 516 E------KVLNPDNLELSKARYDLMRAVRITLQNALALVGVSAPEKM 556 >gi|89093512|ref|ZP_01166460.1| arginyl-tRNA synthetase [Oceanospirillum sp. MED92] gi|89082202|gb|EAR61426.1| arginyl-tRNA synthetase [Oceanospirillum sp. MED92] Length = 561 Score = 578 bits (1489), Expect = e-162, Method: Composition-based stats. Identities = 195/586 (33%), Positives = 307/586 (52%), Gaps = 36/586 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + +++ LK + + + +I++E RD +HG ++N AM L++ +P +AE Sbjct: 5 IAELIESALKNLIENGTLPADVQPKIMVENTRDKSHGDYASNIAMTLAKAAKSNPRQLAE 64 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 +V + ++ IAG GFIN ++S + ++ +I+ YGRN G G KV +E Sbjct: 65 KLVEALPESDNLKRTEIAGPGFINFFISGASTGNLVKTILTEKEAYGRNNDGAGRKVQVE 124 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+H+GH R A VGD L LM +G++VTRE+Y NDAG QIN LA SV R Sbjct: 125 FVSANPTGPLHIGHGRGAAVGDCLCRLMDANGWDVTREFYYNDAGQQINNLAFSVQARC- 183 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGK-----ELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 + L D P Y G Y+ + + + + + L ++ ++V + Sbjct: 184 KGLTPEDPSWPADGYRGDYIVELAESFMRGDTVKSEDQSFTGTKDAEDLEAIRHFAVAYL 243 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 DL+A + D+F E + + + L GY YE Sbjct: 244 RHEQDLDLQAFGVDFDVFFLESSLYT--EGKVEAAVQKLIENGYTYE------------- 288 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 D L R+T GDD DR + K DG YTYF D+AY K++RGFD +I G+DH Sbjct: 289 ---DDGALWLRTTDFGDDKDRVMRKKDGGYTYFVPDVAYHLNKWQRGFDTVINEQGADHH 345 Query: 362 GYVKRLEAVAAAVSEK--KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 + R+ A A+ K + +L ++V + + G +K+SKRAG ++TLR +++EVG Sbjct: 346 STITRVRAGLQALKADIPKGWPDYVLHQMVTVMKGGEEVKISKRAGSYVTLRDLIEEVGR 405 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + RK+ L FD + +S +NPV+Y+QYA+AR SIFR+ K+ D Sbjct: 406 DATRYFLAARKSDSHLTFDIDLARSESADNPVYYIQYAHARVCSIFRKLKENNLSWDEAT 465 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + E E SE L+++L YP V++NA A+EP+++A YL DLA+ FH +++ Sbjct: 466 GIEALDSLELE---SEKNLVINLGRYPEVVKNAANAREPHQIANYLKDLAAEFHTYYNSE 522 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + L RL L AV ++ +GL+++GV +P +M Sbjct: 523 KT-------LVEDADLRNARLTLAVAVRHVLANGLDLLGVSAPEQM 561 >gi|228955613|ref|ZP_04117611.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229072831|ref|ZP_04206030.1| Arginyl-tRNA synthetase [Bacillus cereus F65185] gi|229082576|ref|ZP_04215039.1| Arginyl-tRNA synthetase [Bacillus cereus Rock4-2] gi|228701008|gb|EEL53531.1| Arginyl-tRNA synthetase [Bacillus cereus Rock4-2] gi|228710322|gb|EEL62297.1| Arginyl-tRNA synthetase [Bacillus cereus F65185] gi|228803982|gb|EEM50603.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 556 Score = 577 bits (1488), Expect = e-162, Method: Composition-based stats. Identities = 207/587 (35%), Positives = 331/587 (56%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL D ++PE Y G + +GK LA+++ E++ ++Y + Sbjct: 181 LSVEARYMQAL-GLDKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL++ ++ D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKEREEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ +D D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLAVDGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|118480395|ref|YP_897546.1| arginyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] gi|118419620|gb|ABK88039.1| arginyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam] Length = 556 Score = 577 bits (1487), Expect = e-162, Method: Composition-based stats. Identities = 206/587 (35%), Positives = 330/587 (56%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL + ++PE Y G + +GK LA+++ E++ ++Y + Sbjct: 181 LSVKARYMQAL-GLEKEMPEDGYHGADIIAIGKRLAEEFGDRYAKADEKESYEFYREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL++ ++ D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATDGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAAALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNVELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|228924110|ref|ZP_04087386.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835600|gb|EEM80965.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 556 Score = 577 bits (1487), Expect = e-162, Method: Composition-based stats. Identities = 207/587 (35%), Positives = 330/587 (56%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL D ++PE Y G + +GK LA+++ E++ ++Y + Sbjct: 181 LSVEARYMQAL-GLDKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL++ ++ D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKEREEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLAADGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|310639600|ref|YP_003944358.1| arginyl-tRNA synthetase 1 [Paenibacillus polymyxa SC2] gi|309244550|gb|ADO54117.1| Arginyl-tRNA synthetase 1 [Paenibacillus polymyxa SC2] Length = 559 Score = 576 bits (1486), Expect = e-162, Method: Composition-based stats. Identities = 196/581 (33%), Positives = 309/581 (53%), Gaps = 32/581 (5%) Query: 7 FSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 + ++ + ++ + V ++ L I +E P+D +HG L+TN AM L+R +P IA Sbjct: 9 INQKVTSAIEAAVLAAGIVSREELPTITLEVPKDKSHGDLATNVAMQLTRIAKKNPRQIA 68 Query: 66 ELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 E ++A + ++S IAG GFIN L+ SYL ++ + G +YGR +G G KV Sbjct: 69 EDLIANMDLASASIESAEIAGPGFINFRLNKSYLYAVIGQVQEQGADYGRVQVGAGKKVQ 128 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 IEFVSANPTG +H+GH R A VGD L +++ F+GY+VTREYYINDAG QI ++ S+ R Sbjct: 129 IEFVSANPTGSLHLGHARGAAVGDALCNVLDFAGYQVTREYYINDAGNQIYNMSRSIEAR 188 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 Y Q L +++PE Y G + KEL + LL+ ++Y ++ + Sbjct: 189 YLQEL-GQPAEMPEDGYHGEDIIGFAKELVAEKGDSLLSMEPGDRAAYFREYGLEKELNK 247 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 I+ DL+ + D + SE + D + ++ L + +Y+ Sbjct: 248 IKRDLERFRVPFDSWFSETSLY--DNGEVLKALNELRDREEIYD---------------- 289 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 +T GDD DR L+K+DG+YTY D+AY + KY RG+D +I + G+DH GY+ Sbjct: 290 KDGATWLNTTKYGDDKDRVLIKNDGTYTYLTPDIAYHRDKYARGYDTIINIWGADHHGYI 349 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 R++A A+ ++ VL+ ++V L+++G +KMSKR G +T+ +++EVG D++R+ Sbjct: 350 PRMKAAMEALGNDPDKLKVLIAQMVSLFQNGEKVKMSKRTGKAVTMEDLMEEVGVDAIRY 409 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 R LDFD S ENPVFYVQYA+AR S++RQA++ + P Sbjct: 410 FFTMRSMDSHLDFDMDLAISTSNENPVFYVQYAHARACSVYRQAEEQG----IAVLPLAE 465 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 + E L+ + E P + A P+++ Y+Y+LAS+FH ++ R Sbjct: 466 VDLSKLTAEHEYDLLRKIGELPEEVSVAAANFAPHRMIRYVYELASMFHSYYKAER---- 521 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V + T RL L AV + I + L ++GV +P M Sbjct: 522 ---VITEDAAQTQARLALFGAVRTTIANVLKLVGVSAPERM 559 >gi|254482629|ref|ZP_05095867.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2148] gi|214036988|gb|EEB77657.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2148] Length = 561 Score = 576 bits (1485), Expect = e-162, Method: Composition-based stats. Identities = 187/590 (31%), Positives = 302/590 (51%), Gaps = 36/590 (6%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + + ++ L + + + ++ I+R RD +HG L++N A+ L++ +P Sbjct: 1 MKQEITQLIEQALDALVIQDHLPADTQAKVQIDRTRDKSHGDLASNIALTLAKAAKKNPR 60 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +A LI A + V IAG GFIN +L+ S + ++ +I+ G +G + +G G + Sbjct: 61 ELAGLICAALPESDLVAKTEIAGPGFINFFLTDSSSQSVVRTILERGAAFGHSNVGAGRR 120 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V +EFVSANPTGP+HVGH R A VGD+L LM +G+ V E+Y NDAGAQI+ LA SV Sbjct: 121 VQVEFVSANPTGPLHVGHGRGAAVGDSLCRLMMATGWNVASEFYYNDAGAQIDNLARSVQ 180 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDYS 237 R + D PE Y G Y+ V D + + + ++ ++ Sbjct: 181 ARC-NGMDPQSPDWPEDGYRGGYISDVANAYLAGDTIDAQDQHVTGAADVDDVEAIRQFA 239 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 V + + DLKA + D++ E + + + + L QG+ YE Sbjct: 240 VAYLRREQDLDLKAFAVHFDLYFLESSLY--NSGAVEQTVQRLIEQGHTYE--------- 288 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 L R+T GDD DR + KS+G YTYF D+AY K++RGF+ +I G Sbjct: 289 -------QDGALWLRTTDFGDDKDRVMRKSEGGYTYFLPDVAYHLNKWQRGFERVINEQG 341 Query: 358 SDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 +DH V R+ A A+ + + +L ++V + RDG +K+SKRAG ++TLR ++D Sbjct: 342 ADHHSTVTRVRAGLQALQQDIPQGWPDYVLHQMVTVMRDGEEVKISKRAGSYVTLRDLID 401 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 EVG D+ R+ ++ R S L FD QS +NPV+Y+QYA+AR SI R+ ++ Sbjct: 402 EVGRDATRYFLVARGPSSQLTFDIDLALSQSNDNPVYYIQYAHARVCSIMRKLEEQGDTW 461 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + + + E L+ L ++P V+ +A EP+ +A YL +LA FH Sbjct: 462 SIE---AGLESLGQLTEDHEKALMRRLDQFPEVVSHAAENSEPHNVANYLRELAGDFHSW 518 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + +++ + RL L AV +IN+GL+++GV +P M Sbjct: 519 YNAHKT-------LVDDKSVRDARLALSEAVRQVINNGLDLLGVSAPESM 561 >gi|229087850|ref|ZP_04219963.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-44] gi|228695457|gb|EEL48329.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-44] Length = 556 Score = 576 bits (1485), Expect = e-162, Method: Composition-based stats. Identities = 204/587 (34%), Positives = 328/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K+ ++ K ++ + + +V+E P+D HG STN AM L+R Sbjct: 1 MNSLEQVKELIKDEIQAAVLKAELATAEQIPNVVLESPKDKTHGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE ++A K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELIANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPAIVKAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV IEFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQIEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL D ++PE Y G + +G+ LA+++ E++ ++Y + Sbjct: 181 LSVEARYMQAL-GLDKEMPEDGYHGADIIGIGQRLAEEFGDRYAKADEKESYEFYREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL++ ++ D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDAALAVLKERDEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R + LDFD +S ENPV+Y QYA+AR SI RQ +++ D Sbjct: 402 VDAMRYFFAMRSSDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLTAGGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLVAS------EKEVELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R L+ AV + + L ++GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYDLMRAVRITLQNALALVGVSAPEKM 556 >gi|257062918|ref|YP_003142590.1| arginyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476] gi|256790571|gb|ACV21241.1| arginyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476] Length = 583 Score = 576 bits (1485), Expect = e-162, Method: Composition-based stats. Identities = 196/599 (32%), Positives = 311/599 (51%), Gaps = 37/599 (6%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M D + L + + + +ERPRD HG + A+ ++ + Sbjct: 1 MQPREDLGRLISAALDLAIASGALALETTPEVTLERPRDEGHGDWACTVALRCAKQAKKN 60 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A+ IV + V+ V IAG GFIN YL L+ ++ + +YG+ I +G Sbjct: 61 PREVAQTIVDYMPEPDFVEKVEIAGPGFINFYLKHDALQNVVVKVREQKGDYGKGTIPEG 120 Query: 121 TKVN-IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 + IE++S+NPTGPMHVGH R A +G +A++M +GY+V E+YIND G Q++ + Sbjct: 121 MRRVQIEYISSNPTGPMHVGHGRWAALGSAMANVMRHAGYDVFEEFYINDHGVQMDKFGV 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ RY Q L D+ +PEG Y G+Y+ + K + D+ + +N E + + +++ Sbjct: 181 SIVARYLQQLGQADAAVPEGGYNGLYVNDIAKAIIDRDGDKWVNADEHERMVEFREFGYA 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFH-------RGDPSPIRDIIDNLARQGYVYEGILP 292 +M IR + + + SE + + SP+ I+D L QG +Y+ Sbjct: 241 YIMDNIRSTCERFGNHFERWQSERELYAPSDDFWFDGRSPVEAILDKLREQGDIYD---- 296 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 + + FRS+ GD+ DR L KSDG+YTYFA+D+AY K RGFD++ Sbjct: 297 ------------EDGAVWFRSSAYGDEKDRVLQKSDGAYTYFASDVAYHYLKKMRGFDHL 344 Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412 I + G+DH GY+ R+ AV AA + V+L +LV L+RDG P++MSKR G+ IT Sbjct: 345 IDIWGADHHGYIARVAAVLAAEGF-PGALEVVLGQLVNLFRDGKPVRMSKRTGEMITFEE 403 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 ++DEVG D+ R+ ML R + + +DFD K NPV+Y QYA+AR S+ R A Sbjct: 404 LIDEVGIDATRYWMLDRSSDQPIDFDIEVAKRADDSNPVYYDQYAHARICSLLRNASGHA 463 Query: 473 PD--LDFDLFPRNVIPQESEFD----TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 + LD D IP + + EL L+ ++E+ +I A + P++L Y Y Sbjct: 464 GEDNLDMDAVATECIPADVDLSVLSAPEELALMRKMSEFGDMIALAARDRAPFRLTHYAY 523 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +LAS+FH +++ ++A + L RL L A ++ LN++G+ +P M Sbjct: 524 ELASLFHSFYANC------PVLKAEDEGLKQARLALADATRIVMAITLNLLGISAPQRM 576 >gi|206970067|ref|ZP_03231020.1| arginyl-tRNA synthetase [Bacillus cereus AH1134] gi|229181611|ref|ZP_04308936.1| Arginyl-tRNA synthetase [Bacillus cereus 172560W] gi|206734644|gb|EDZ51813.1| arginyl-tRNA synthetase [Bacillus cereus AH1134] gi|228601807|gb|EEK59303.1| Arginyl-tRNA synthetase [Bacillus cereus 172560W] Length = 556 Score = 576 bits (1484), Expect = e-162, Method: Composition-based stats. Identities = 206/587 (35%), Positives = 329/587 (56%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL D ++PE Y G + +GK LA+++ E++ ++Y + Sbjct: 181 LSVEARYMQAL-GLDKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL++ ++ D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKEREEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNVELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|78357338|ref|YP_388787.1| arginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|109894988|sp|Q30Z04|SYR_DESDG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|78219743|gb|ABB39092.1| arginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 551 Score = 576 bits (1484), Expect = e-162, Method: Composition-based stats. Identities = 206/579 (35%), Positives = 326/579 (56%), Gaps = 32/579 (5%) Query: 8 SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 + L+ LK + +++ D++ IE P+D G L+ N A++L++P + P +A Sbjct: 4 KNHLQTALKAVVADLELP--WPDKVSIEPPKDKKFGDLAANIALVLAKPAAMPPRELAAR 61 Query: 68 IVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 I R++ P++ V IAG GFIN+ +P + + + + +G +G +G G KV IE Sbjct: 62 ITERLQQKYPEISGVEIAGPGFINVTYAPDFWHRTVHMVEQAGGRFGSVNVGNGRKVQIE 121 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 +VSANPTGP+H+GH R A +GD+LA +M F+G+E + EYYINDAG Q+ L SV++R + Sbjct: 122 YVSANPTGPLHIGHGRGAAIGDSLARMMRFAGFETSTEYYINDAGRQMLLLGASVYYRAK 181 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 Q + D PE YY G Y++ + E+ ++ +LL PEE+ L + + Y+V +M IR Sbjct: 182 Q-IKGLDVAEPEEYYRGDYIRDIASEVL-GFTPDLLEKPEEEALAVCQKYAVDTIMAGIR 239 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 DL ++ HD++ SE + + D L R G YE + Sbjct: 240 QDLADFSVSHDVWFSEKSLV--ETGAVDKTFDRLRRSGLAYE----------------ED 281 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366 L FR+T GDD +R L KS+G TYFA+D+AY KY+RGFD + + G+DH GYV R Sbjct: 282 GALWFRTTDFGDDKNRVLKKSNGYLTYFASDIAYHDNKYDRGFDLCVDIWGADHHGYVPR 341 Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 + A A+ + +V+L +LV L R+G + MS RAG+F TL VV EVG+D+ RFM Sbjct: 342 MRAAVQALGKPADSFDVILVQLVNLLRNGEQVAMSTRAGEFETLADVVKEVGADAARFMF 401 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 L RK+ LDFD VK++S +NPV+YVQYA+AR S+ R+A + + + P Sbjct: 402 LSRKSDSSLDFDLELVKQRSMDNPVYYVQYAHARICSVLRKAAERGTTPETHSDEELLKP 461 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 E+ ++ + + +E A + + +++YL +LAS H +++ Sbjct: 462 ---LVHADEIDMLRLVDRFEDTVEAAATSLSVHHISYYLQELASALHRFYANH------P 512 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A + ++ RL L+ AVA ++ +GL+++GV +P M Sbjct: 513 VLNAPDEQILKARLALLRAVAQVLRNGLDLLGVSAPEAM 551 >gi|39996911|ref|NP_952862.1| arginyl-tRNA synthetase [Geobacter sulfurreducens PCA] gi|39983799|gb|AAR35189.1| arginyl-tRNA synthetase [Geobacter sulfurreducens PCA] Length = 568 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 200/587 (34%), Positives = 305/587 (51%), Gaps = 38/587 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 ++ L+ + + IV+E+P HG + AAM++++ P IAE Sbjct: 12 VRDLVREALERSFADGTLASGHVPDIVVEKPALEEHGDFACTAAMLMAKAEKKAPRAIAE 71 Query: 67 LIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 +I+ + + V+SV IAG GFIN + S ++L I G +YG++ G G KV + Sbjct: 72 IIITHLNDRESLVESVEIAGPGFINFRMRTSAWCRVLRRIEREGGDYGKSEAGAGKKVQV 131 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+H+GH R A +GDT+ L+A G++VTRE+Y NDAG QI LALSV R Sbjct: 132 EFVSANPTGPLHIGHGRGAAIGDTICRLLAAIGWDVTREFYYNDAGQQIANLALSVQARC 191 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVG-----KELADKYSSELLNFPEEKWLPIVKDYSVQA 240 + P Y G Y+K V +E D + + + ++ ++V Sbjct: 192 L-GVEPGGPLWPTDGYQGEYIKDVARSYLNRETVDAGDQHVTAAGDPHDVEAIRRFAVAY 250 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 + + DL+A ++ D++ E + + D++ + +G+ YE Sbjct: 251 LRREQDQDLRAFDVGFDVYFLESSLYA--EGRVDDVVQRIIAKGHAYE------------ 296 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 L R+T GDD DR + KSDGSYTYF D+AY K+ERGF ++ G+DH Sbjct: 297 ----QDGALWLRTTEFGDDKDRVMRKSDGSYTYFVPDVAYHLNKWERGFIRVVNEQGADH 352 Query: 361 SGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 + R+ A A+ K +L ++V + R G +K+SKRAG ++TLR +VDEVG Sbjct: 353 HSTITRVRAGLQALDAGIPKGWPEYVLHQMVTVMRGGEEVKISKRAGSYVTLRDLVDEVG 412 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ RF L RK L FD K+Q+ ENPV+YVQYA+AR SIF A D Sbjct: 413 RDATRFFFLMRKPDSQLVFDIDLAKQQTLENPVYYVQYAHARICSIFENAADKGVVPP-- 470 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + ES EL L+ L+ +P ++E + + EP+++ +YL +LA FH ++ Sbjct: 471 --TVDQASLESLGTPEELTLVKLLSSFPEIVEGSALNFEPHRITYYLQELAGAFHSFYNK 528 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R V + LT RL L+H+ A++I +GL ++GV +P +M Sbjct: 529 NR-------VITEDADLTGARLLLLHSTATVIRNGLGLLGVSAPEKM 568 >gi|298505924|gb|ADI84647.1| arginyl-tRNA synthetase [Geobacter sulfurreducens KN400] Length = 568 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 201/587 (34%), Positives = 305/587 (51%), Gaps = 38/587 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 ++ L+ + + IV+E+P HG + AAM++++ P IAE Sbjct: 12 VRDLVREALERSFADGTLASGHVPDIVVEKPALEEHGDFACTAAMLMAKAEKKAPRAIAE 71 Query: 67 LIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 +I+ + + V+SV IAG GFIN + S ++L I G +YG + G G KV + Sbjct: 72 IIITHLNDRESLVESVEIAGPGFINFRMRTSAWCRVLRRIEREGGDYGESEAGAGKKVQV 131 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+H+GH R A +GDT+ L+A G++VTRE+Y NDAG QI LALSV R Sbjct: 132 EFVSANPTGPLHIGHGRGAAIGDTICRLLAAIGWDVTREFYYNDAGQQIANLALSVQARC 191 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVG-----KELADKYSSELLNFPEEKWLPIVKDYSVQA 240 + D P Y G Y+K V +E D + + + ++ ++V Sbjct: 192 L-GVEPGDPLWPTDGYQGEYIKDVARSYLNRETVDAGDQHVTAAGDPHDVEAIRRFAVAY 250 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 + + DL+A ++ D++ E + + D++ + +G+ YE Sbjct: 251 LRREQDQDLRAFDVGFDVYFLESSLYA--EGRVDDVVQRIIAKGHAYE------------ 296 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 L R+T GDD DR + KSDGSYTYF D+AY K+ERGF ++ G+DH Sbjct: 297 ----QDGALWLRTTEFGDDKDRVMRKSDGSYTYFVPDVAYHLNKWERGFIRVVNEQGADH 352 Query: 361 SGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 + R+ A A+ K +L ++V + R G +K+SKRAG ++TLR +VDEVG Sbjct: 353 HSTITRVRAGLQALDAGIPKGWPEYVLHQMVTVMRGGEEVKISKRAGSYVTLRDLVDEVG 412 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ RF L RK L FD K+Q+ ENPV+YVQYA+AR SIF A D Sbjct: 413 RDATRFFFLMRKPDSQLVFDIDLAKQQTLENPVYYVQYAHARICSIFENAADKGVVPP-- 470 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + ES EL L+ L+ +P ++E + + EP+++ +YL +LA FH ++ Sbjct: 471 --TVDQASLESLGTPEELTLVKLLSSFPEIVEGSALNFEPHRITYYLQELAGAFHSFYNK 528 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R V + LT RL L+H+ A++I +GL ++GV +P +M Sbjct: 529 NR-------VITEDADLTGARLLLLHSTATVIRNGLGLLGVSAPEKM 568 >gi|258513416|ref|YP_003189638.1| arginyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771] gi|257777121|gb|ACV61015.1| arginyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771] Length = 570 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 201/590 (34%), Positives = 329/590 (55%), Gaps = 40/590 (6%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 + L+ K+I+ L V+E PR+ HG ++N AM+L++P + P IA Sbjct: 11 NLKRILECAFKDINNNGIFHADKLPEFVVEVPREKGHGDFASNLAMMLAKPARMAPRRIA 70 Query: 66 ELIVARIKIDPDVDS----------VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115 E+ V + + D V +AG GFIN YL+P+++ + L I G +YGR Sbjct: 71 EIFVEHLNEEIKSDKQDGSFILLDRVEVAGPGFINFYLNPAWVYETLRIIETEGNDYGRV 130 Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175 ++G G KV +EFVSANPTG +H+G+ R A +GD LASL+ F+GY+VTRE+Y+NDAG QI Sbjct: 131 MLGSGKKVQVEFVSANPTGLLHMGNARGAALGDCLASLLDFAGYQVTREFYVNDAGNQIE 190 Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235 L++ RY Q L D +PE Y G+ + + DKY ++ L+ P + ++ + Sbjct: 191 NFGLTLEARYLQLL-GQDCPVPEDGYHGLDIIQTMQGFVDKYGNKFLSAPGKVRRMVMIN 249 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 Y+++ ++ IR+ L +++D++ SE D H + + + + L +G++YE Sbjct: 250 YALEEKLREIRNTLFDFGVRYDVWFSEKDLH--ESGAVNEAVAILKEKGHIYE------- 300 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 L F++T G + D +++S+G TYFAAD+AY K K++RGFD +I + Sbjct: 301 ---------KEGALWFKATEFGVEKDEVVVRSNGVPTYFAADIAYHKNKFDRGFDRVINI 351 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 G+DH G+V R++ A+ ++++L +LVRL+R ++MSKR G F+TL +++ Sbjct: 352 WGADHHGHVSRVKGAVEAIGYDPESLDIILMQLVRLFRGTEIVRMSKRTGQFVTLDELIE 411 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 EVG D R+ + R LDFD K QS ENPV+Y+QYA+AR SI RQ + Sbjct: 412 EVGRDVARYFFVMRSADSHLDFDLELAKSQSNENPVYYIQYAHARICSILRQLDEQGGR- 470 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 L + + EL LI +A++P I +A + P++LA Y+++LA + H Sbjct: 471 ---LPQAGAVDLALLKEEIELDLIRKMADFPEEIASAAESLAPHRLARYVHELAGLLHSF 527 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ R V ++ L+ RL LV +V ++I + L+++G+ +P +M Sbjct: 528 YNSHR-------VIVDDAALSEARLVLVMSVKTVIKNALSLLGIAAPEKM 570 >gi|229193615|ref|ZP_04320559.1| Arginyl-tRNA synthetase [Bacillus cereus ATCC 10876] gi|228589920|gb|EEK47795.1| Arginyl-tRNA synthetase [Bacillus cereus ATCC 10876] Length = 556 Score = 575 bits (1482), Expect = e-162, Method: Composition-based stats. Identities = 206/587 (35%), Positives = 329/587 (56%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL D ++PE Y G + +GK LA+++ E++ ++Y + Sbjct: 181 LSVEARYMQAL-GLDKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL++ ++ D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKEREEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|329769586|ref|ZP_08260991.1| arginyl-tRNA synthetase [Gemella sanguinis M325] gi|328838538|gb|EGF88145.1| arginyl-tRNA synthetase [Gemella sanguinis M325] Length = 544 Score = 575 bits (1482), Expect = e-162, Method: Composition-based stats. Identities = 218/581 (37%), Positives = 338/581 (58%), Gaps = 39/581 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 +++ L+ K+++ I +E P++ +G S+N AM L+R L +P IAE Sbjct: 1 MKNKIIELLQSSLAKLEISGV---DIYVETPKNNDNGDFSSNIAMQLTRVLKKNPRVIAE 57 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 I++ I D ++ + IAG GFIN Y+ S L ++ ++ +YG N +G+G KV +E Sbjct: 58 EIISNIPEDETIEKIEIAGPGFINFYVKKSSLGSVIEKVLTDNEKYGENNVGQGKKVLLE 117 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 +VSANPTG +HVGH R A D+LA +M SGY+++REYYINDAG QIN L +S RY+ Sbjct: 118 YVSANPTGTLHVGHARNAAYSDSLARIMKKSGYDLSREYYINDAGNQINNLVISAIVRYK 177 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 QAL +++LPE Y G +K +G++L D++ LL E ++DY+V M+ I+ Sbjct: 178 QAL-GLEAELPEDAYHGEDIKVLGQKLKDEFGDSLLE--REDLESFIRDYAVAYEMENIK 234 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 DL +++D++ SE + + + +++L QGYVYE Sbjct: 235 KDLGDFGLEYDVYFSEKSLY--ENGLVDKALESLREQGYVYE----------------KD 276 Query: 307 KQLLFRSTMV--GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 L ++T + GDD DR L+K+DGS TY +D+AY K K +RGFD ++ V+G+DH GYV Sbjct: 277 GALWLKTTALGTGDDKDRVLIKADGSLTYLTSDIAYHKNKLDRGFDLLLDVLGADHHGYV 336 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 RL+A A+ K Q+ L+ ++V+L +G +KMSKR G ITLR ++DEVG+D+ R+ Sbjct: 337 ARLKASIVAMGYKAEQLEALIMQMVQLLNNGEVVKMSKRTGKAITLRDLIDEVGADAARY 396 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 ++ R LDFDF KEQS +NP++YVQYA+AR SI RQA + DF++ N Sbjct: 397 FLVMRSADSHLDFDFAVAKEQSSDNPLYYVQYAHARICSILRQASEQG---DFNIENCN- 452 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 E D ++L+ +LA +P ++ A EP+++ YL +LAS FH +++ + Sbjct: 453 --YELLTDEYSVELLKNLAYFPEIVAQAATNYEPHRICNYLQNLASSFHKFYNNNK---- 506 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V N++ T L L+ AV + + L +IGV +P +M Sbjct: 507 ---VITENKEQTESYLALITAVKITLRNALELIGVSAPEKM 544 >gi|218233285|ref|YP_002370139.1| arginyl-tRNA synthetase [Bacillus cereus B4264] gi|218161242|gb|ACK61234.1| arginine--tRNA ligase [Bacillus cereus B4264] Length = 556 Score = 575 bits (1482), Expect = e-162, Method: Composition-based stats. Identities = 205/587 (34%), Positives = 329/587 (56%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVSAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL + ++PE Y G + +GK LA+++ E++ ++Y + Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL++ ++ D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|42784538|ref|NP_981785.1| arginyl-tRNA synthetase [Bacillus cereus ATCC 10987] gi|81408378|sp|Q72X85|SYR_BACC1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|42740470|gb|AAS44393.1| arginyl-tRNA synthetase [Bacillus cereus ATCC 10987] Length = 556 Score = 575 bits (1482), Expect = e-162, Method: Composition-based stats. Identities = 205/587 (34%), Positives = 329/587 (56%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETSTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL + ++PE Y G + +GK LA+++ E++ ++Y + Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIAIGKRLAEEFGDRYAKADEKESYEFYREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL++ ++ D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAAALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|228961626|ref|ZP_04123235.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani str. T13001] gi|229051033|ref|ZP_04194581.1| Arginyl-tRNA synthetase [Bacillus cereus AH676] gi|229112776|ref|ZP_04242308.1| Arginyl-tRNA synthetase [Bacillus cereus Rock1-15] gi|229153525|ref|ZP_04281703.1| Arginyl-tRNA synthetase [Bacillus cereus m1550] gi|228630129|gb|EEK86780.1| Arginyl-tRNA synthetase [Bacillus cereus m1550] gi|228670610|gb|EEL25922.1| Arginyl-tRNA synthetase [Bacillus cereus Rock1-15] gi|228722342|gb|EEL73739.1| Arginyl-tRNA synthetase [Bacillus cereus AH676] gi|228798108|gb|EEM45112.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 556 Score = 575 bits (1482), Expect = e-162, Method: Composition-based stats. Identities = 205/587 (34%), Positives = 329/587 (56%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL + ++PE Y G + +GK LA+++ E++ ++Y + Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL++ ++ D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|229164310|ref|ZP_04292241.1| Arginyl-tRNA synthetase [Bacillus cereus R309803] gi|228619153|gb|EEK76048.1| Arginyl-tRNA synthetase [Bacillus cereus R309803] Length = 556 Score = 575 bits (1482), Expect = e-162, Method: Composition-based stats. Identities = 205/587 (34%), Positives = 329/587 (56%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL + ++PE Y G + +GK LA+++ E++ ++Y + Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL++ ++ D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKIV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAAALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|30265386|ref|NP_847763.1| arginyl-tRNA synthetase [Bacillus anthracis str. Ames] gi|47530933|ref|YP_022282.1| arginyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49188199|ref|YP_031452.1| arginyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|65317342|ref|ZP_00390301.1| COG0018: Arginyl-tRNA synthetase [Bacillus anthracis str. A2012] gi|165871340|ref|ZP_02215989.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|167635784|ref|ZP_02394094.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0442] gi|167640392|ref|ZP_02398656.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0193] gi|170688209|ref|ZP_02879420.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0465] gi|170708079|ref|ZP_02898527.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|177651880|ref|ZP_02934463.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0174] gi|190569103|ref|ZP_03022002.1| arginyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I] gi|227818129|ref|YP_002818138.1| arginyl-tRNA synthetase [Bacillus anthracis str. CDC 684] gi|229601148|ref|YP_002869577.1| arginine--tRNA ligase [Bacillus anthracis str. A0248] gi|254687194|ref|ZP_05151052.1| arginyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066] gi|254735489|ref|ZP_05193197.1| arginyl-tRNA synthetase [Bacillus anthracis str. Western North America USA6153] gi|254742250|ref|ZP_05199937.1| arginyl-tRNA synthetase [Bacillus anthracis str. Kruger B] gi|254755835|ref|ZP_05207867.1| arginyl-tRNA synthetase [Bacillus anthracis str. Vollum] gi|254761549|ref|ZP_05213569.1| arginyl-tRNA synthetase [Bacillus anthracis str. Australia 94] gi|254762174|ref|ZP_05214020.1| arginyl-tRNA synthetase [Bacillus anthracis str. Australia 94] gi|38372560|sp|Q81JT7|SYR1_BACAN RecName: Full=Arginyl-tRNA synthetase 1; AltName: Full=Arginine--tRNA ligase 1; Short=ArgRS 1 gi|30260064|gb|AAP29249.1| arginine--tRNA ligase [Bacillus anthracis str. Ames] gi|47506081|gb|AAT34757.1| arginyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor'] gi|49182126|gb|AAT57502.1| arginyl-tRNA synthetase [Bacillus anthracis str. Sterne] gi|164713007|gb|EDR18535.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0488] gi|167511612|gb|EDR86994.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0193] gi|167528893|gb|EDR91650.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0442] gi|170127052|gb|EDS95931.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0389] gi|170667902|gb|EDT18654.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0465] gi|172082584|gb|EDT67648.1| arginyl-tRNA synthetase [Bacillus anthracis str. A0174] gi|190559771|gb|EDV13757.1| arginyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I] gi|227006270|gb|ACP16013.1| arginine--tRNA ligase [Bacillus anthracis str. CDC 684] gi|229265556|gb|ACQ47193.1| arginine--tRNA ligase [Bacillus anthracis str. A0248] Length = 556 Score = 574 bits (1481), Expect = e-162, Method: Composition-based stats. Identities = 205/587 (34%), Positives = 328/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K + + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELVANFDKAKASTEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL + ++PE Y G + +GK LA+++ E++ ++Y + Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL++ ++ D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|229099792|ref|ZP_04230716.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-29] gi|229105951|ref|ZP_04236573.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-28] gi|228677435|gb|EEL31690.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-28] gi|228683538|gb|EEL37492.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-29] Length = 556 Score = 574 bits (1481), Expect = e-161, Method: Composition-based stats. Identities = 206/587 (35%), Positives = 327/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV IEFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQIEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL D ++PE Y G + +GK LA+++ E+ + Y + Sbjct: 181 LSVEARYMQAL-GLDKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL++ ++ D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EGGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAAALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|109894995|sp|Q74C63|SYR_GEOSL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS Length = 561 Score = 574 bits (1481), Expect = e-161, Method: Composition-based stats. Identities = 200/587 (34%), Positives = 305/587 (51%), Gaps = 38/587 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 ++ L+ + + IV+E+P HG + AAM++++ P IAE Sbjct: 5 VRDLVREALERSFADGTLASGHVPDIVVEKPALEEHGDFACTAAMLMAKAEKKAPRAIAE 64 Query: 67 LIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 +I+ + + V+SV IAG GFIN + S ++L I G +YG++ G G KV + Sbjct: 65 IIITHLNDRESLVESVEIAGPGFINFRMRTSAWCRVLRRIEREGGDYGKSEAGAGKKVQV 124 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+H+GH R A +GDT+ L+A G++VTRE+Y NDAG QI LALSV R Sbjct: 125 EFVSANPTGPLHIGHGRGAAIGDTICRLLAAIGWDVTREFYYNDAGQQIANLALSVQARC 184 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVG-----KELADKYSSELLNFPEEKWLPIVKDYSVQA 240 + P Y G Y+K V +E D + + + ++ ++V Sbjct: 185 L-GVEPGGPLWPTDGYQGEYIKDVARSYLNRETVDAGDQHVTAAGDPHDVEAIRRFAVAY 243 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 + + DL+A ++ D++ E + + D++ + +G+ YE Sbjct: 244 LRREQDQDLRAFDVGFDVYFLESSLYA--EGRVDDVVQRIIAKGHAYE------------ 289 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 L R+T GDD DR + KSDGSYTYF D+AY K+ERGF ++ G+DH Sbjct: 290 ----QDGALWLRTTEFGDDKDRVMRKSDGSYTYFVPDVAYHLNKWERGFIRVVNEQGADH 345 Query: 361 SGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 + R+ A A+ K +L ++V + R G +K+SKRAG ++TLR +VDEVG Sbjct: 346 HSTITRVRAGLQALDAGIPKGWPEYVLHQMVTVMRGGEEVKISKRAGSYVTLRDLVDEVG 405 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ RF L RK L FD K+Q+ ENPV+YVQYA+AR SIF A D Sbjct: 406 RDATRFFFLMRKPDSQLVFDIDLAKQQTLENPVYYVQYAHARICSIFENAADKGVVPP-- 463 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + ES EL L+ L+ +P ++E + + EP+++ +YL +LA FH ++ Sbjct: 464 --TVDQASLESLGTPEELTLVKLLSSFPEIVEGSALNFEPHRITYYLQELAGAFHSFYNK 521 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R V + LT RL L+H+ A++I +GL ++GV +P +M Sbjct: 522 NR-------VITEDADLTGARLLLLHSTATVIRNGLGLLGVSAPEKM 561 >gi|206975865|ref|ZP_03236776.1| arginyl-tRNA synthetase [Bacillus cereus H3081.97] gi|217962853|ref|YP_002341431.1| arginyl-tRNA synthetase [Bacillus cereus AH187] gi|222098835|ref|YP_002532893.1| arginyl-tRNA synthetase [Bacillus cereus Q1] gi|229142106|ref|ZP_04270631.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-ST26] gi|229199487|ref|ZP_04326148.1| Arginyl-tRNA synthetase [Bacillus cereus m1293] gi|206745959|gb|EDZ57355.1| arginyl-tRNA synthetase [Bacillus cereus H3081.97] gi|217064150|gb|ACJ78400.1| arginyl-tRNA synthetase [Bacillus cereus AH187] gi|221242894|gb|ACM15604.1| arginine--tRNA ligase (arginyl-tRNA synthetase) [Bacillus cereus Q1] gi|228583892|gb|EEK42049.1| Arginyl-tRNA synthetase [Bacillus cereus m1293] gi|228641395|gb|EEK97701.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-ST26] gi|324329312|gb|ADY24572.1| arginyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 556 Score = 574 bits (1481), Expect = e-161, Method: Composition-based stats. Identities = 205/587 (34%), Positives = 329/587 (56%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL + ++PE Y G + +GK LA+++ E++ ++Y + Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIAIGKRLAEEFGDRYAKADEKESYEFYREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL++ ++ D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|254516119|ref|ZP_05128179.1| arginyl-tRNA synthetase [gamma proteobacterium NOR5-3] gi|219675841|gb|EED32207.1| arginyl-tRNA synthetase [gamma proteobacterium NOR5-3] Length = 560 Score = 574 bits (1481), Expect = e-161, Method: Composition-based stats. Identities = 194/586 (33%), Positives = 306/586 (52%), Gaps = 37/586 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 ++ L L+ I E I +ER RD AHG L++N A+ ++ L + P +A+ Sbjct: 5 VAALLGEALQTIISAQGAEIS-APAIQVERTRDAAHGDLASNIALAAAKLLKMPPRELAQ 63 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 I + + +D IAG GFIN +LS ++ ++ G ++G N G G KV +E Sbjct: 64 AICDALPENTAIDRTEIAGPGFINFFLSNDSQAAVVQDVLRQGAKFGHNNSGTGRKVQVE 123 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+HVGH R A VGDTLA ++ G+EV RE+Y NDAGAQIN L LSV R Sbjct: 124 FVSANPTGPLHVGHGRGAAVGDTLARILDACGWEVVREFYYNDAGAQINNLGLSVQARC- 182 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGK-----ELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 + L +D P+ Y G Y+ + + E + + + L +++++V + Sbjct: 183 KGLTPDDEGWPDDGYRGDYITELAQAYLAGESVEASDKSVTAAGDADDLDAIREFAVAWL 242 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 + DL++ + DIF E + + + ++ L G Y Sbjct: 243 RREQDLDLQSFGVAFDIFFLESSLY--ESGEVESTVERLVESGNTY-------------- 286 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 + L R+T GDD DR + K DG YTYF D+AY K+ RGF+ +I G+DH Sbjct: 287 --VQDDALWLRTTSFGDDKDRVMRKQDGGYTYFLPDVAYHLNKWRRGFERVINEQGADHH 344 Query: 362 GYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 V R+ A A+ E + +L ++V + RDG +K+SKRAG ++TLR ++ EVG Sbjct: 345 STVTRVRAGLQALGEGIPQGWPEYVLHQMVTVMRDGQEVKLSKRAGSYLTLRDLITEVGR 404 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ ++ R + L FD QS +NPVFY+QYA+AR S+ R+ + +D DL Sbjct: 405 DATRYFLVARSPNSQLTFDIDLALSQSNDNPVFYIQYAHARVCSVRRKFLEQGLPVDLDL 464 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + + + E++++ LA +P ++ A + EP ++A YL +LA FH +++ Sbjct: 465 ---DTVALDRLVEPQEIEVLKQLARFPEIVARAGTSAEPQQIANYLRELAGEFHAYYNAH 521 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ +L RL L AV +I +GL ++GV +P M Sbjct: 522 K-------VLIDDEELRSARLALTTAVGQVIANGLELLGVSAPESM 560 >gi|47570345|ref|ZP_00240989.1| arginyl-tRNA synthetase [Bacillus cereus G9241] gi|47552987|gb|EAL11394.1| arginyl-tRNA synthetase [Bacillus cereus G9241] Length = 556 Score = 574 bits (1481), Expect = e-161, Method: Composition-based stats. Identities = 205/587 (34%), Positives = 329/587 (56%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL + ++PE Y G + +GK LA+++ E++ ++Y + Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL++ ++ D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKVINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|196036513|ref|ZP_03103908.1| arginyl-tRNA synthetase [Bacillus cereus W] gi|218906541|ref|YP_002454375.1| arginyl-tRNA synthetase [Bacillus cereus AH820] gi|228930370|ref|ZP_04093372.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229124865|ref|ZP_04254042.1| Arginyl-tRNA synthetase [Bacillus cereus 95/8201] gi|195990846|gb|EDX54819.1| arginyl-tRNA synthetase [Bacillus cereus W] gi|218538647|gb|ACK91045.1| arginyl-tRNA synthetase [Bacillus cereus AH820] gi|228658573|gb|EEL14236.1| Arginyl-tRNA synthetase [Bacillus cereus 95/8201] gi|228829293|gb|EEM74928.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 556 Score = 574 bits (1480), Expect = e-161, Method: Composition-based stats. Identities = 205/587 (34%), Positives = 329/587 (56%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL + ++PE Y G + +GK LA+++ E++ ++Y + Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL++ ++ D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAAALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|300117879|ref|ZP_07055646.1| arginyl-tRNA synthetase [Bacillus cereus SJ1] gi|298724743|gb|EFI65418.1| arginyl-tRNA synthetase [Bacillus cereus SJ1] Length = 556 Score = 574 bits (1480), Expect = e-161, Method: Composition-based stats. Identities = 205/587 (34%), Positives = 328/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYNVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL + ++PE Y G + +GK LA+++ E++ ++Y + Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL++ ++ D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|228942510|ref|ZP_04105045.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975443|ref|ZP_04135998.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228982076|ref|ZP_04142368.1| Arginyl-tRNA synthetase [Bacillus thuringiensis Bt407] gi|228777614|gb|EEM25889.1| Arginyl-tRNA synthetase [Bacillus thuringiensis Bt407] gi|228784237|gb|EEM32261.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817103|gb|EEM63193.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326943161|gb|AEA19057.1| arginyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis CT-43] Length = 556 Score = 574 bits (1480), Expect = e-161, Method: Composition-based stats. Identities = 205/587 (34%), Positives = 330/587 (56%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV +EFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL + ++PE Y G + +GK LA+++ E++ ++Y + Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL++ ++ D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDAALAVLKERDEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EGGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLAADGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|229118855|ref|ZP_04248202.1| Arginyl-tRNA synthetase [Bacillus cereus Rock1-3] gi|228664511|gb|EEL20006.1| Arginyl-tRNA synthetase [Bacillus cereus Rock1-3] Length = 556 Score = 574 bits (1480), Expect = e-161, Method: Composition-based stats. Identities = 206/587 (35%), Positives = 327/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV IEFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQIEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL D ++PE Y G + +GK LA+++ E+ + Y + Sbjct: 181 LSVEARYMQAL-GLDKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL++ ++ D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EGGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAAALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRNTLQNALAIVGVSAPEKM 556 >gi|49481250|ref|YP_039355.1| arginyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|81394157|sp|Q6HAS1|SYR2_BACHK RecName: Full=Arginyl-tRNA synthetase 2; AltName: Full=Arginine--tRNA ligase 2; Short=ArgRS 2 gi|49332806|gb|AAT63452.1| arginine--tRNA ligase (arginyl-tRNA synthetase) [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 556 Score = 574 bits (1480), Expect = e-161, Method: Composition-based stats. Identities = 205/587 (34%), Positives = 329/587 (56%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL + ++PE Y G + +GK LA+++ E++ ++Y + Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKSLAEEFGDRYAKADEKESYEFYREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL++ ++ D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|30023394|ref|NP_835025.1| arginyl-tRNA synthetase [Bacillus cereus ATCC 14579] gi|52140201|ref|YP_086631.1| arginyl-tRNA synthetase [Bacillus cereus E33L] gi|196040960|ref|ZP_03108257.1| arginine--tRNA ligase [Bacillus cereus NVH0597-99] gi|196045443|ref|ZP_03112674.1| arginyl-tRNA synthetase [Bacillus cereus 03BB108] gi|225867345|ref|YP_002752723.1| arginyl-tRNA synthetase [Bacillus cereus 03BB102] gi|228917976|ref|ZP_04081508.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229094476|ref|ZP_04225545.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-42] gi|229130611|ref|ZP_04259567.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-Cer4] gi|229147903|ref|ZP_04276244.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-ST24] gi|229158924|ref|ZP_04286981.1| Arginyl-tRNA synthetase [Bacillus cereus ATCC 4342] gi|229187591|ref|ZP_04314729.1| Arginyl-tRNA synthetase [Bacillus cereus BGSC 6E1] gi|254724022|ref|ZP_05185807.1| arginyl-tRNA synthetase [Bacillus anthracis str. A1055] gi|254724717|ref|ZP_05186500.1| arginyl-tRNA synthetase [Bacillus anthracis str. A1055] gi|296505786|ref|YP_003667486.1| arginyl-tRNA synthetase [Bacillus thuringiensis BMB171] gi|38372513|sp|Q814Q8|SYR_BACCR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|81685308|sp|Q630N6|SYR2_BACCZ RecName: Full=Arginyl-tRNA synthetase 2; AltName: Full=Arginine--tRNA ligase 2; Short=ArgRS 2 gi|29898955|gb|AAP12226.1| Arginyl-tRNA synthetase [Bacillus cereus ATCC 14579] gi|51973670|gb|AAU15220.1| arginine--tRNA ligase (arginyl-tRNA synthetase) [Bacillus cereus E33L] gi|196023650|gb|EDX62326.1| arginyl-tRNA synthetase [Bacillus cereus 03BB108] gi|196028128|gb|EDX66738.1| arginine--tRNA ligase [Bacillus cereus NVH0597-99] gi|225787404|gb|ACO27621.1| arginine--tRNA ligase [Bacillus cereus 03BB102] gi|228595843|gb|EEK53525.1| Arginyl-tRNA synthetase [Bacillus cereus BGSC 6E1] gi|228624535|gb|EEK81305.1| Arginyl-tRNA synthetase [Bacillus cereus ATCC 4342] gi|228635553|gb|EEK92042.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-ST24] gi|228652950|gb|EEL08832.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-Cer4] gi|228688860|gb|EEL42690.1| Arginyl-tRNA synthetase [Bacillus cereus Rock3-42] gi|228841641|gb|EEM86753.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|296326838|gb|ADH09766.1| arginyl-tRNA synthetase [Bacillus thuringiensis BMB171] Length = 556 Score = 574 bits (1480), Expect = e-161, Method: Composition-based stats. Identities = 205/587 (34%), Positives = 329/587 (56%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL + ++PE Y G + +GK LA+++ E++ ++Y + Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL++ ++ D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|329768518|ref|ZP_08260006.1| arginyl-tRNA synthetase [Gemella haemolysans M341] gi|328836668|gb|EGF86325.1| arginyl-tRNA synthetase [Gemella haemolysans M341] Length = 544 Score = 574 bits (1480), Expect = e-161, Method: Composition-based stats. Identities = 218/581 (37%), Positives = 334/581 (57%), Gaps = 39/581 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 +++ L+ K++++ I +E P++ +G S+N AM L+R L +P IAE Sbjct: 1 MKNKIVELLQNSLAKLEIDGV---DIHVETPKNTENGDFSSNVAMQLTRVLRKNPRVIAE 57 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 I++ I D V+ + IAG GFIN ++ S L ++ I+ +YG N IG+G KV +E Sbjct: 58 EIISNIDEDEAVEKIEIAGPGFINFFVKKSSLGSVVGKILEDDFKYGENNIGQGKKVLLE 117 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 +VSANPTG +HVGH R A D+LA +M SGY+++REYYINDAG QIN L +S RY+ Sbjct: 118 YVSANPTGTLHVGHARNAAYSDSLARIMKKSGYDLSREYYINDAGNQINNLVISAIVRYK 177 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 QAL D++LP+ Y G +K +G++L D++ LL E +++Y+V M+ I+ Sbjct: 178 QAL-GMDAELPDDAYHGEDIKVLGQKLKDEFGDSLLE--REDLNEFIREYAVAYEMENIK 234 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 DL +++D+F SE + + + +++L QG+VYE Sbjct: 235 KDLGDFGLEYDVFFSEKSLY--ENGLVDKALESLREQGFVYE----------------KD 276 Query: 307 KQLLFRSTMVG--DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 L +T +G DD DR L+K+DGS TY +D+AY K K +RGFD +I V+G+DH GY+ Sbjct: 277 GALWLETTALGTGDDKDRVLIKADGSLTYLTSDIAYHKNKLDRGFDLLIDVLGADHHGYI 336 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 RL+A A+ K Q+ VL+ ++V+L +G +KMSKR G ITLR ++DEVG+D+ R+ Sbjct: 337 ARLKASIVAMGYKAEQLEVLIMQMVQLLNNGEVVKMSKRTGKAITLRDLIDEVGADAARY 396 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 ++ R LDFDF KEQS +NP++YVQYA+AR SI RQA + + Sbjct: 397 FLVMRSADSHLDFDFAVAKEQSSDNPLYYVQYAHARICSILRQAAEQVE------YDVKN 450 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 E D + L+ +LA YP ++ A EP+++ YL LAS FH +++ + Sbjct: 451 CDYELLTDEYSVDLLKNLAYYPEIVAQAAKNYEPHRICNYLQSLASSFHKFYNNNK---- 506 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V N++ T L L+ AV + + L++IGV +P +M Sbjct: 507 ---VITENKEQTQSYLALITAVKITLRNALDLIGVSAPEKM 544 >gi|228936649|ref|ZP_04099442.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228822988|gb|EEM68827.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 556 Score = 574 bits (1480), Expect = e-161, Method: Composition-based stats. Identities = 206/587 (35%), Positives = 329/587 (56%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV IEFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQIEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL + ++PE Y G + +GK LA+++ E++ ++Y + Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL++ ++ D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|58040184|ref|YP_192148.1| arginyl-tRNA synthetase [Gluconobacter oxydans 621H] gi|81351656|sp|Q5FQ54|SYR_GLUOX RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|58002598|gb|AAW61492.1| Arginyl-tRNA synthetase [Gluconobacter oxydans 621H] Length = 602 Score = 574 bits (1480), Expect = e-161, Method: Composition-based stats. Identities = 248/595 (41%), Positives = 357/595 (60%), Gaps = 18/595 (3%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 LFA ++ + L+ + + ++++ R+ + RD +HG ++TNAAM+ ++P P Sbjct: 13 LFARTRVQVCDALRSVVP--GLPEEVVQRVDLTPTRDPSHGDMATNAAMLAAKPARRKPA 70 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 IA +V ++ P+V AG GF+NL L P L+ + SI+ +G +YGR+ +G+GT+ Sbjct: 71 EIAAELVDKLFALPEVAKAEAAGPGFVNLTLKPEVLQGVAVSILKAGDQYGRSTMGQGTR 130 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VN+E+VSANPTGPMHVGHCR AVVGD LA+L+ +G VTREYYINDAG Q+ L + + Sbjct: 131 VNVEYVSANPTGPMHVGHCRGAVVGDALANLLEAAGNTVTREYYINDAGTQVVALTWATY 190 Query: 183 WRYQQALYNNDSD------LPEGY-YPGVYLKHVGKELADKYSSELLNFPE-----EKWL 230 WRY Q + S P G Y G YL V + +ADK+ L N W Sbjct: 191 WRYLQVIGTEISADDFSPLTPNGLQYQGEYLIPVAQSIADKHGRALANADGGPADPSVWF 250 Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290 V+ ++ MM IR+DL+AL I H++F SE + + I L +G +YEG+ Sbjct: 251 ETVRREALTQMMAAIREDLEALGISHEVFASEAE--TLASGRVDAAIAKLDSKGLLYEGV 308 Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350 L PPK K + + R Q LFRST GDD DR L KSDG+ TYFA D+ Y K E D Sbjct: 309 LEPPKGKMPEDWEA-RPQTLFRSTEFGDDQDRALRKSDGTNTYFANDIGYHAQKAE-NAD 366 Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 +I V+G+DH GYV R+ A +A+++ K V++C++VR+ ++G P++MSKRAG F+TL Sbjct: 367 VLIDVLGADHGGYVSRMRAAISALTDGKTGFEVVMCQIVRVVKNGEPVRMSKRAGTFVTL 426 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R ++DEVG D+VRF ML RK ++FD V Q+++NPVFYVQYA+ARCRS+ R A+ Sbjct: 427 RDLLDEVGRDAVRFTMLTRKADAQMEFDLDAVVAQTRDNPVFYVQYAHARCRSVLRSAET 486 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 +F + EL ++ LA +PR +E A A+EP+++A Y DLAS Sbjct: 487 MFGADTVTPEALCSADLSNLSSDVELAVLRRLAAFPRSVEAAATAREPHRIATYCIDLAS 546 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 FH W+ GRE+ LRF+ N+R ++ +L LV A+A + L I+GV EM Sbjct: 547 DFHALWNRGREDTTLRFLHENDRATSLAKLALVSAIAGTLRCALTILGVVPVEEM 601 >gi|75758530|ref|ZP_00738650.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218900490|ref|YP_002448901.1| arginyl-tRNA synthetase [Bacillus cereus G9842] gi|228903841|ref|ZP_04067956.1| Arginyl-tRNA synthetase [Bacillus thuringiensis IBL 4222] gi|228968494|ref|ZP_04129482.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. T04001] gi|74493964|gb|EAO57060.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218544147|gb|ACK96541.1| arginyl-tRNA synthetase [Bacillus cereus G9842] gi|228791200|gb|EEM38814.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. T04001] gi|228855750|gb|EEN00295.1| Arginyl-tRNA synthetase [Bacillus thuringiensis IBL 4222] Length = 556 Score = 574 bits (1479), Expect = e-161, Method: Composition-based stats. Identities = 206/587 (35%), Positives = 328/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV +EFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL D ++PE Y G + +GK LA+++ E+ + Y + Sbjct: 181 LSVEARYMQAL-GLDKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL++ ++ D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDAALTVLKERDEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EGGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLAADGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|228911203|ref|ZP_04075008.1| Arginyl-tRNA synthetase [Bacillus thuringiensis IBL 200] gi|228848379|gb|EEM93228.1| Arginyl-tRNA synthetase [Bacillus thuringiensis IBL 200] Length = 556 Score = 574 bits (1479), Expect = e-161, Method: Composition-based stats. Identities = 206/587 (35%), Positives = 328/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV +EFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL D ++PE Y G + +GK LA+++ E+ + Y + Sbjct: 181 LSVEARYMQAL-GLDKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL++ ++ D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDAALAVLKERDEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EGGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLAADGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|317496051|ref|ZP_07954411.1| arginyl-tRNA synthetase [Gemella moribillum M424] gi|316913626|gb|EFV35112.1| arginyl-tRNA synthetase [Gemella moribillum M424] Length = 544 Score = 574 bits (1479), Expect = e-161, Method: Composition-based stats. Identities = 222/581 (38%), Positives = 329/581 (56%), Gaps = 43/581 (7%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 L+N LK ++ I +E P++ +G S+N AM L+R L +P IAE Sbjct: 5 IVELLQNSLKTLEIDGV-------DIYVETPKNTDNGDFSSNVAMQLTRVLRKNPRVIAE 57 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 I+A I D V+ V IAG GFIN Y+ S L I+ I+ +YG N G+G KV +E Sbjct: 58 EIIANIPADDAVEKVEIAGPGFINFYVKKSSLGSIIEKILADDCKYGENNTGQGKKVLLE 117 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 +VSANPTG +HVGH R A D+LA +M SGY+++REYYINDAG QIN L +S RY+ Sbjct: 118 YVSANPTGTLHVGHARNAAYSDSLARIMKKSGYDISREYYINDAGNQINNLVISAIVRYK 177 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 QAL ++++PE Y G +K +G++L D++S LL E ++DY+V M I+ Sbjct: 178 QAL-GLEAEMPEDAYHGEDIKVLGQKLKDEFSDSLLE--REDLESFIRDYAVAYEMDNIK 234 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 DL +++D++ SE + + + + +L QG+VYE Sbjct: 235 KDLGDFGLEYDVYFSEKSLY--EDGLVDKAMASLREQGFVYE----------------KD 276 Query: 307 KQLLFRSTMVG--DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 L +T +G DD DR L+K+DG+ TY +D+AY K K +RGFD +I V+G+DH GY+ Sbjct: 277 GALWLETTALGTGDDKDRVLIKADGTLTYLTSDIAYHKNKLDRGFDLLIDVLGADHHGYI 336 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 RL+A A+ K Q+ VL+ ++V+L +G +KMSKR G ITLR ++DEVG+D+ R+ Sbjct: 337 ARLKASIVAMGYKADQLEVLIMQMVQLLNNGEVVKMSKRTGKAITLRDLIDEVGADAARY 396 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 ++ R LDFDF KEQS +NP++YVQYA+AR SI RQA + + + + Sbjct: 397 FLVMRSADSHLDFDFAVAKEQSSDNPLYYVQYAHARICSILRQAAEQ------ENYNLDK 450 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 E D ++L+ LA YP ++ A EP+++ YL +LAS FH ++ + Sbjct: 451 CDYELLTDEYSVELLKTLAYYPEIVAQAATNYEPHRICNYLQNLASAFHKFYNSNK---- 506 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V N + T L L+ AV + + L +IGV +P +M Sbjct: 507 ---VITENAEQTQSYLALITAVKITLRNALELIGVSAPEKM 544 >gi|157825222|ref|YP_001492942.1| arginyl-tRNA synthetase [Rickettsia akari str. Hartford] gi|166232832|sp|A8GM09|SYR_RICAH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|157799180|gb|ABV74434.1| arginyl-tRNA synthetase [Rickettsia akari str. Hartford] Length = 576 Score = 573 bits (1478), Expect = e-161, Method: Composition-based stats. Identities = 247/585 (42%), Positives = 366/585 (62%), Gaps = 9/585 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +F ++LK + ++ ++I + IE P+D +G LS+N AMI++ + Sbjct: 1 MNIF----NKLKQDIIAASRQLYNNQEIANNATIETPKDNFNGDLSSNIAMIIAAKENIS 56 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A + P + S+ IAG GFIN + + + I+ ++ I K Sbjct: 57 PREVALKFKEILITLPYIASIEIAGPGFINFTIKAETWQIAIKDILQHEEKFCEIDIDKS 116 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +NIE+VSANPTGPMH+GH R AV GD LA ++ GY VT+EYY+NDAG+QIN L + Sbjct: 117 RNINIEYVSANPTGPMHIGHARGAVYGDVLARILQKVGYFVTKEYYVNDAGSQINDLVST 176 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V RY++AL +P+G YPG YL +G+ LA++Y ++LL EE+ IVK+++V+ Sbjct: 177 VLLRYREAL-GETITIPDGLYPGEYLIPLGQILAEEYGNKLLMMDEEERFKIVKNFAVEK 235 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 M+ + R DL L I+HDIF SE H D I + + L G +YEGILPPPK K Sbjct: 236 MLDLNRKDLADLGIKHDIFFSEQSLH--DKCAIEETVKLLTGMGLIYEGILPPPKGKVHD 293 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + D +R Q LF+ST GD DRP+ K+DGS++YFA+DLAY K K +RG ++IYV+G+DH Sbjct: 294 EWD-NRVQKLFKSTNYGDSQDRPIEKADGSWSYFASDLAYAKDKIDRGVSHLIYVLGADH 352 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 SGYVKR+EA+ A+ +++ +++V +C+LV +G+P+KMSKR G F +++ V EVG D Sbjct: 353 SGYVKRIEAIVKALGKEQVKVDVKICQLVNFVENGVPVKMSKRLGSFASVQDVNHEVGKD 412 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +RFMML R+N + LDFD KVKEQS+ENP+FYVQYA+ R SI +A+++ P+ ++ F Sbjct: 413 IIRFMMLTRQNDKPLDFDLVKVKEQSRENPIFYVQYAHVRTISILSKARELMPE-SYNNF 471 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 E+ +I LA + + +E + EP+++AFYL +LAS FH W+ G+ Sbjct: 472 EACKYDLSLLSSEEEIAIIKLLASWTKTLETSAKYFEPHRIAFYLINLASKFHSMWNFGK 531 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 E+ RF+ +N++LT RL L A+ +I SGL +IGVE + M Sbjct: 532 EHSDYRFIIESNKELTTARLALATAIQKVIASGLEVIGVEPMDRM 576 >gi|228949088|ref|ZP_04111358.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228810529|gb|EEM56880.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 556 Score = 573 bits (1478), Expect = e-161, Method: Composition-based stats. Identities = 205/587 (34%), Positives = 329/587 (56%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL + ++PE Y G + +GK LA+++ E++ ++Y + Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL++ ++ D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGRD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAAALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|254231550|ref|ZP_04924877.1| arginyl-tRNA synthetase argS (arginine-tRNA ligase) [Mycobacterium tuberculosis C] gi|124600609|gb|EAY59619.1| arginyl-tRNA synthetase argS (arginine-tRNA ligase) [Mycobacterium tuberculosis C] Length = 619 Score = 573 bits (1478), Expect = e-161, Method: Composition-based stats. Identities = 196/582 (33%), Positives = 297/582 (51%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LK + + ++ L + + +ERPR HG ++N AM L++ +G +P Sbjct: 73 ADLAELLKATAAAVLAERGLDASALPQMVTVERPRIPEHGDYASNLAMQLAKKVGTNPRE 132 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + + S +AG GFIN+ L + K+++S++ +G YG +L+ G KV Sbjct: 133 LAGWLAEALTKVDGIASAEVAGPGFINMRLETAAQAKVVTSVIDAGHSYGHSLLLAGRKV 192 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L+ G +V REYY ND GAQI+ A S+ Sbjct: 193 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGADVVREYYFNDHGAQIDRFANSLIA 252 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + P+ Y G Y+ ++ +++ K L+ P+ + + V M Sbjct: 253 AAK------GEPTPQDGYAGSYITNIAEQVLQKAPDA-LSLPDAELRETFRAIGVDLMFD 305 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L D++ ED H G + + I L G +YE Sbjct: 306 HIKQSLHEFGTDFDVYTHEDSMHTG--GRVENAIARLRETGNIYE--------------- 348 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 R++ GDD DR ++KSDG Y A DLAY+ K +RGFD IY++G+DH GY Sbjct: 349 -KDGATWLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHGY 407 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA + A + VL+ ++V L RDG P++MSKRAG +TL +V+ +G D+ R Sbjct: 408 IARLKAAAAAFGDDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAAR 467 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D S ENPV+YVQYA+AR ++ R A ++ D + Sbjct: 468 YSLIRSSVDTAIDIDLALWSSASNENPVYYVQYAHARLSALARNAAELALIPDTNHL--- 524 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 E E L+ L E+PRV+E A +EP+++ YL DLA +H + R P Sbjct: 525 ----ELLNHDKEGTLLRTLGEFPRVLETAASLREPHRVCRYLEDLAGDYHRFYDSCRVLP 580 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L RL L A +I +GL IIGV +P M Sbjct: 581 QG---DEQPTDLHTARLALCQATRQVIANGLAIIGVTAPERM 619 >gi|70727292|ref|YP_254208.1| arginyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435] gi|109895040|sp|Q4L425|SYR_STAHJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|68448018|dbj|BAE05602.1| arginyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435] Length = 553 Score = 573 bits (1478), Expect = e-161, Method: Composition-based stats. Identities = 200/586 (34%), Positives = 311/586 (53%), Gaps = 34/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + S L +K K + + I I +E P+D +G STN AM+L++ + Sbjct: 1 MNIIEKVKSTLIEEIKASIEKANLAEDI-PEIKVEIPKDTKNGDYSTNIAMVLTKVAKRN 59 Query: 61 PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ IV + V IAG GFIN YL YL ++ + G ++G K Sbjct: 60 PREIAQAIVDNLDTSKANVKQVDIAGPGFINFYLDNQYLTAVIPEAINKGDKFGCAEESK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 T + +E+VSANPTG +H+GH R A VGD+LA+++ +GY VTREYYINDAG QI LA Sbjct: 120 NTNILLEYVSANPTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ R+ +AL + ++P Y G + +GK+LADK+ E+ ++ +E+ L + V Sbjct: 180 SIETRFFEALGDTSHEMPADGYNGKDIIEIGKDLADKH-PEMKDYSDEERLKTFRQLGVD 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M ++ DL N+ D + SE + + I + + + GY YE Sbjct: 239 YEMDKLKKDLADFNVHFDNWFSETSLY--ENGAIDNTLAKMNELGYTYEA---------- 286 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 R++ DD DR L+K DG+YTYF D AY K RG D +I +MG+D Sbjct: 287 ------DGATWLRTSDFKDDKDRVLIKKDGTYTYFTPDTAYHYNKINRGNDILIDLMGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A ++ + + ++VRL +DG+ +KMSKR G+ ITLR ++DEVG Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMQDGVEVKMSKRTGNAITLREIMDEVGI 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R DFD KE+S++NP++Y QYA+AR SI +QAK+ ++ D Sbjct: 401 DAARYFLTMRSPDSHFDFDLELAKEKSQDNPIYYAQYAHARICSILKQAKEQGVEVTADA 460 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + + L+ +AE+ IE+A + P++L Y+ DLAS FH ++ Sbjct: 461 DFSTI------TNEKAIDLLKKVAEFEPTIESAAENRAPHRLTNYIQDLASAFHKFYNAE 514 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ + T + LV AV +++ L ++GV +P M Sbjct: 515 K-------VLTDDAEKTKAHIALVDAVRITLHNALALVGVSAPESM 553 >gi|229065010|ref|ZP_04200308.1| Arginyl-tRNA synthetase [Bacillus cereus AH603] gi|228716311|gb|EEL68023.1| Arginyl-tRNA synthetase [Bacillus cereus AH603] Length = 556 Score = 573 bits (1477), Expect = e-161, Method: Composition-based stats. Identities = 205/587 (34%), Positives = 325/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVSAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV IEFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQIEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL + ++PE Y G + +GK LA+++ E+ + Y + Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL + + D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLASFRVNFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EGGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKDTLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|332971382|gb|EGK10340.1| arginine--tRNA ligase [Desmospora sp. 8437] Length = 564 Score = 573 bits (1477), Expect = e-161, Method: Composition-based stats. Identities = 220/587 (37%), Positives = 327/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERP-RDCAHGHLSTNAAMILSRPLGL 59 M L+ ++E + + + V+ R+ +HG L+TN AM L+R Sbjct: 9 MNALERMKENLRQEIREAVLRAGLAAEEELPEVVLEVPREKSHGDLATNMAMQLARIAKK 68 Query: 60 DPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +P IAE IV + D V + IAG GFIN ++ S+LR++L I +G YGR+ G Sbjct: 69 NPRQIAEAIVDGMNRDRVAVREIHIAGPGFINFFIDRSHLREVLVEIGRAGDAYGRSSAG 128 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G KV +EFVS NPTG +H+GH R A +GD L +++ +GY+VTREYYINDAG QI + Sbjct: 129 NGEKVLVEFVSVNPTGSLHLGHARGAAIGDVLCNVLEAAGYDVTREYYINDAGNQIRNMT 188 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LS+ RY++AL D PE Y G + +GK LA++ LL+ EE+ ++ Y + Sbjct: 189 LSLEARYREAL-GRKVDFPEDGYRGQDIVDLGKRLAEEEGDRLLSLDEEERFAWIRRYGL 247 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 +++ I+ DLK +Q D + SE H D +++ ++ L R+G YE Sbjct: 248 NRLLEGIKKDLKEYRVQFDSWFSEQSLH--DSGSVQESVEELTRRGQTYE---------- 295 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 L +S+ GDD DR L+K DGSYTY D+AY + KY RGFD ++ + G+ Sbjct: 296 ------QDGALWLKSSQFGDDKDRVLVKQDGSYTYITPDIAYHRNKYNRGFDRIVDIFGA 349 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GYV R++A AA+ ++ L+ ++V+LY+ G +KMSKR G ITL +++EVG Sbjct: 350 DHHGYVPRMKAAMAALGFDVDKMTFLITQMVKLYQGGELVKMSKRTGKAITLAELMEEVG 409 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ R LDFD QS ENPVFYVQYA+AR S+FR+A + ++ D Sbjct: 410 VDATRYFFASRGPDSHLDFDMDLAVSQSNENPVFYVQYAHARINSVFRRAGEQGMEVKLD 469 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + +E+EFD L+ LAE+P I A P+++ YLYDLA+ +++ Sbjct: 470 PDSLSALQEEAEFD-----LLQKLAEFPEEIATAAKQMAPHRMVRYLYDLATQLQSYYNA 524 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R V + +LT RL L+ VA ++ SGL +IGV +P +M Sbjct: 525 YR-------VIQEDERLTRARLSLLLGVAQVLKSGLRMIGVSAPEQM 564 >gi|301056832|ref|YP_003795043.1| arginyl-tRNA synthetase [Bacillus anthracis CI] gi|300379001|gb|ADK07905.1| arginyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI] Length = 556 Score = 573 bits (1477), Expect = e-161, Method: Composition-based stats. Identities = 205/587 (34%), Positives = 329/587 (56%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL + ++PE Y G + +GK LA+++ E++ ++Y + Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL++ ++ D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSEISLYKN--GKIDQALAVLKERDEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|85860177|ref|YP_462379.1| arginyl-tRNA synthetase [Syntrophus aciditrophicus SB] gi|109895044|sp|Q2LVV5|SYR_SYNAS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|85723268|gb|ABC78211.1| arginyl-tRNA synthetase [Syntrophus aciditrophicus SB] Length = 562 Score = 573 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 211/580 (36%), Positives = 328/580 (56%), Gaps = 31/580 (5%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + +KN + + + + +E +D HG +TN AM+++ ++P IAE Sbjct: 13 LTMLVKNAVDGCVAEGLLAGGNFPPVEMEMTKDTVHGDYATNFAMVMASHARMNPRKIAE 72 Query: 67 LIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 +I + + ++ IAG GFIN ++ + + L I G YG G+G KV + Sbjct: 73 MISSHFRDGEQILEKTEIAGPGFINFFVRENVWAEQLKDIESLGNHYGSAETGRGKKVQV 132 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+H+GH R AVVGD +A+++ SGYE+ REYYINDAG Q+N L SV++RY Sbjct: 133 EFVSANPTGPLHIGHARGAVVGDVIANILGMSGYEIFREYYINDAGNQMNNLGKSVWYRY 192 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245 Q+ L + P+ Y G Y++ + ++ K L E+ + DY+ +++ I Sbjct: 193 QELL-GRSVEFPDTCYQGDYIREIAGDILKKDGDIHLTSNEDSNIRFFTDYAAGIILEEI 251 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 + DLK I D + SE + + D + ++ +L +G++Y D Sbjct: 252 KQDLKDFGIVFDKYFSERELYVNDG--VARLLADLEEKGFIYR----------------D 293 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365 + L F++T GDD DR +++ +G TYFAAD+AY K KYERGFD++I + G+DH GY+ Sbjct: 294 DETLWFKTTDFGDDKDRVVVRKNGEPTYFAADIAYHKNKYERGFDSVIDIWGADHHGYIP 353 Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425 R+ A A+ K + V+L +LV L RDG P+ MS R+G+F+T++ VVDEVG D+ R+ Sbjct: 354 RMHAGIQALGHSKDALRVVLVQLVNLLRDGKPVAMSTRSGEFVTMKEVVDEVGRDAARYN 413 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 L R++ LDFD K QS ENPV+YVQYA+AR SI R AK+ +L NV Sbjct: 414 FLMRRSDSHLDFDLEVAKRQSNENPVYYVQYAHARICSILRMAKERGIELP---SFENVE 470 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 PQ E+ LI L +P V+E + EP+++ FYL DLA +FH +++ + Sbjct: 471 PQLLRI-PEEIALIKTLTRFPEVVEGSARTLEPHRITFYLNDLAGLFHSYYNKYK----- 524 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V +++ +T RL LV + +++ + L ++GV +P +M Sbjct: 525 --VISDDEAMTRTRLFLVKCIQTVLKNALTLLGVSAPEKM 562 >gi|240169522|ref|ZP_04748181.1| arginyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478] Length = 550 Score = 573 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 191/582 (32%), Positives = 297/582 (51%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LK + + ++ L + +++ERPR+ HG ++N A+ L++ +G++P Sbjct: 4 ADLAELLKATAAAVLAEHGLDTSALPQTVLVERPRNPEHGDYASNLALQLAKKVGVNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + A + + S +AG GFINL L S +I++S++ +G +G + + G K+ Sbjct: 64 LAGWLAAALTKADGIASAEVAGPGFINLRLETSAQAQIVNSVIDAGDHFGHSDLLAGQKI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L+ G +V REYY ND GAQI+ A S+ Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGADVVREYYFNDHGAQIDRFANSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + P Y G Y+ + + +K L+ P+ + ++ V M Sbjct: 184 AAK------GEPTPADGYAGSYITDIAAHVLEKAPDA-LSLPDPEMRETFREIGVDLMFA 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I++ L D++ ED H + I L G +Y+ Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMHT--TGRVDQAIARLRETGNIYQ--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 R++ GDD DR ++KSDG Y A DLAY+ K +RGFD IY++G+DH GY Sbjct: 280 -KDGATWLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL++ AAA E A + VL+ ++V L RDG P++MSKRAG ITL +V+ +G D+ R Sbjct: 339 IARLKSAAAAFGEDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEALGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D S ENPV+YVQYA+AR ++ R A ++ + Sbjct: 399 YSLIRSSVDTAIDIDLALWSSASNENPVYYVQYAHARLSALARNAAELG-------LIPD 451 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 E E +L+ + E+PRV+E A +EP+++ YL DLA +H + R P Sbjct: 452 TAHLELLSHDKEGKLLRTIGEFPRVLETAAALREPHRVCRYLEDLAGDYHRFYDSCRVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L RL L A +I +GL I+GV +P M Sbjct: 512 QG---DEQPTDLHRARLALCQATRQVIANGLAILGVTAPERM 550 >gi|284992535|ref|YP_003411089.1| arginyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160] gi|284065780|gb|ADB76718.1| arginyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160] Length = 553 Score = 573 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 202/581 (34%), Positives = 305/581 (52%), Gaps = 33/581 (5%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 + ++ + + + + ++ +V+ERP++ HG +TN A+ L++P G P +A Sbjct: 5 QLQAVVRTAVGAVVGRGALPVEVPAEVVVERPKNPEHGDYATNVALRLAKPAGRPPREVA 64 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 EL+ ++ P + SV +AG GF+N+ L+ L +I V +G YG G ++N+ Sbjct: 65 ELLAGELRAHPGIASVDVAGPGFLNITLAQGALGRIAVDAVTAGPAYGHTGTLAGQRLNL 124 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+H+G R A VGD L L+ SG VTREYY NDAGAQI+ A S+ Sbjct: 125 EFVSANPTGPVHIGGTRWAAVGDALGRLLEASGASVTREYYFNDAGAQIDRFARSLMAAA 184 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245 +PE Y G Y+ + ++ +L P+E+ ++ V+ M I Sbjct: 185 V------GRPVPEDGYAGDYIGEIAAQVVAAE-PGVLELPDEQQQERFRERGVELMFAEI 237 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 + L A ++ D++ SE H + + I L G+VYE Sbjct: 238 KRTLAAFGVEFDVYFSERTLH--ETGALEKAIARLRENGHVYEA---------------- 279 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365 R+T GDD DRPL+KSDG TYFAAD AY+ K RGFD ++ ++G+DH+GYV Sbjct: 280 DGATWLRTTDFGDDKDRPLVKSDGDPTYFAADCAYYLDKRSRGFDKVVIMLGADHAGYVG 339 Query: 366 RLEAVAAAVSEKK-AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 R A+ AAV + A + +LL +LV L RDG P++MSKRAG + L +V+ VG+D+ R+ Sbjct: 340 RYRALVAAVGDDPDANLEILLGQLVNLVRDGEPVRMSKRAGTVVLLEDLVEAVGADAARY 399 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 + + +D D Q+ +NPVFYVQYA+AR S+ R A DL L Sbjct: 400 ALARASVDQQIDLDLDLWSRQTNDNPVFYVQYAHARISSVLRNAA----DLGIALGEPGD 455 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 + E L+ L E+PRV+ +A + P+++A YL +LA +H + R PR Sbjct: 456 VDAAQLTHERENALLRALGEFPRVLTSAAELRAPHRVARYLEELAGTYHRFYDSCRVLPR 515 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LT+ RL L A A ++ +GL ++GV +P M Sbjct: 516 G---DEETTPLTVARLWLCAATAVVLRNGLGVLGVSAPERM 553 >gi|302344279|ref|YP_003808808.1| arginyl-tRNA synthetase [Desulfarculus baarsii DSM 2075] gi|301640892|gb|ADK86214.1| arginyl-tRNA synthetase [Desulfarculus baarsii DSM 2075] Length = 554 Score = 573 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 199/567 (35%), Positives = 315/567 (55%), Gaps = 33/567 (5%) Query: 21 KIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVD 79 + + + +E+P+ HG L+ N AM+L++P ++P +A++I+ R+ ++ Sbjct: 19 EGLLPQVTAPAFAVEKPKQAEHGDLALNLAMVLAKPCRMNPRAVAQIIIERMADAGGLIE 78 Query: 80 SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVG 139 IAG GFINL+ P + ++ G ++GR +G G + +EFVSANPTGP+HVG Sbjct: 79 RAEIAGPGFINLFCRPLAWLSVAPEVLAQGDDFGRCALGAGRRAQVEFVSANPTGPLHVG 138 Query: 140 HCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEG 199 H R A +GD +A L+AF+G+EV EYYINDAG Q+ TL SV R +QA +D P+ Sbjct: 139 HGRGAALGDVMARLLAFAGWEVATEYYINDAGNQMATLGRSVLIRARQAR-GSDEPFPDK 197 Query: 200 YYPGVYLKHVGKEL-ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 +Y G Y+ + +EL A + LL P+++ + + D++ ++ I+DDL + Sbjct: 198 HYRGDYIVDLAEELLASPEGAGLLAMPQDQAVDLATDWAGGKILAGIKDDLAVFGVNIAT 257 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + SE ++ +D LA +G +YE L FRS+ GD Sbjct: 258 YFSERSLFA--DGKVQAALDELAARGLLYEA----------------DGALWFRSSQFGD 299 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKK 378 D DR + +S+G TYFA+D+AY K++RGFD ++ + G+DH GYV RL A A + Sbjct: 300 DKDRVVRRSNGELTYFASDIAYHLDKFKRGFDAVVDIWGADHHGYVPRLRAAVRAAGRQP 359 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438 + V+L ++V L R G P+ MS RAG+F+TLR VVDEVG+DS RF+ L R++ LDFD Sbjct: 360 EDLTVVLVQMVNLLRGGNPVAMSTRAGEFVTLREVVDEVGADSARFIFLTRRSDAPLDFD 419 Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498 K++S +NPVFYVQYA+ R S+ R+A + +E+ L Sbjct: 420 LDVAKQKSMDNPVFYVQYAHTRVCSVLRKALEAGQG-----QAPPQGLDLGRLGPAEVDL 474 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 + ++P ++ A EP+++A+YL +LAS FH +++ + ++ L+ Sbjct: 475 AKIIGQFPEMVRGAAETLEPHRVAYYLRELASAFHSYYNETH-------ILVDDAALSAA 527 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 RL L AV ++ +GL ++GV +P M Sbjct: 528 RLCLARAVGQVLRNGLALLGVSAPEAM 554 >gi|229170069|ref|ZP_04297760.1| Arginyl-tRNA synthetase [Bacillus cereus AH621] gi|228613416|gb|EEK70550.1| Arginyl-tRNA synthetase [Bacillus cereus AH621] Length = 556 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 205/587 (34%), Positives = 325/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV IEFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQIEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL + ++PE Y G + +GK LA+++ E+ + Y + Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL + + D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLASFRVNFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EGGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|228988590|ref|ZP_04148676.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228771041|gb|EEM19521.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 556 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 204/587 (34%), Positives = 328/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 K KV +EFVSANPTG +H+GH R A VGDTL +L+A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KREKVQVEFVSANPTGDLHLGHARGAAVGDTLCNLLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL + ++PE Y G + +GK LA+++ E++ ++Y + Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADEKESYEFYREYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL++ ++ D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EDGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITNYAFELAATLHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|302390698|ref|YP_003826519.1| arginyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646] gi|302201326|gb|ADL08896.1| arginyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646] Length = 568 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 215/594 (36%), Positives = 331/594 (55%), Gaps = 38/594 (6%) Query: 4 FADFSSRLKNYLKEI---DCKIKVEKKIL-----DRIVIERPRDCAHGHLSTNAAMILSR 55 D +++++ LKE+ K V+ ++ IE P+ AHG + N AM +R Sbjct: 1 MKDVKAQIQDKLKELTVSALKKAVDDGVINLTKIPEFNIEVPQAEAHGDFAANVAMTAAR 60 Query: 56 PLGLDPLTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR 114 + P IAE+I R++I ++ + +AG GFIN YLSP++ ++ I+ G YGR Sbjct: 61 EAKMPPRKIAEIIKERMEISGTGIERIEVAGSGFINFYLSPTWAHGVIPVILSEGDAYGR 120 Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 IGKG KV +EFVSANPTGPMH+G+ R A +GD LAS++ +GY+VTRE+YINDAG QI Sbjct: 121 QDIGKGKKVQVEFVSANPTGPMHMGNARGAALGDALASVLEMAGYDVTREFYINDAGNQI 180 Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234 LS+ RY + L + +PEG Y G +K +EL +K L+ + Sbjct: 181 ENFGLSLEARYLELL-GLEGRIPEGGYHGEDIKDHMRELIEKEGDRFLHVDPAERRAYFI 239 Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294 +Y+++ + ++ DL+ + D++ SE H D ++++I L +GY YE Sbjct: 240 EYALKKNIDRMKRDLENFGVHFDVWFSERSLH--DEGKVQEVIRLLTERGYTYE------ 291 Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354 L F++T G D L++ +G TYFA+D+AY K K++RGF+ +I Sbjct: 292 ----------KDGALWFKATEFGVPKDEVLVRQNGIPTYFASDIAYHKDKFDRGFEWVID 341 Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414 + G+DH G+V R++ AA+ ++ +++ +LVRLYR+G +MSKR G +TL +V Sbjct: 342 IWGADHHGHVARMKGALAALGYDPEKLTIIIMQLVRLYRNGEIARMSKRTGRAVTLADLV 401 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 +EVG D+ RF R LDFD +QS+ENPV+YVQYA+AR SIFRQA + Sbjct: 402 EEVGKDAARFFFNLRGADTHLDFDLDLAVKQSEENPVYYVQYAHARISSIFRQAAEQGVA 461 Query: 475 LDF--DLFPRNVIPQESEF-DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 + D P ++ S+ D +E+QLI LA++P I A PY++A Y +LA+ Sbjct: 462 VPEVRDRSPEDLEKLLSKLTDETEIQLIKKLADFPGEIRVAASTLSPYRIANYTLELAAA 521 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 FH ++ R V ++ LT RL LV AV ++ + I+G+ +P+ M Sbjct: 522 FHSFYNVCR-------VLTDDPDLTAARLMLVKAVQQVLRNAFRILGISAPDRM 568 >gi|149377307|ref|ZP_01895053.1| arginyl-tRNA synthetase [Marinobacter algicola DG893] gi|149358404|gb|EDM46880.1| arginyl-tRNA synthetase [Marinobacter algicola DG893] Length = 561 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 196/586 (33%), Positives = 310/586 (52%), Gaps = 36/586 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 S L++ L + + + + +D +HG + N A++ S+ G P +AE Sbjct: 5 VSELLQSALATLQSEGTLPADQTFTPQVGNTKDKSHGDYACNIALVASKAAGCPPRKLAE 64 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 +V R+ V+ V IAG GFIN ++S + +++++I+ + +YGRN GKG KV +E Sbjct: 65 ALVERLPDSSAVEKVEIAGPGFINFFMSTASAFEVVNTILDNAGQYGRNNNGKGEKVQVE 124 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+HVGH R A +GD L+ L+ +GY+VTRE+Y NDAGAQIN LALSV R Sbjct: 125 FVSANPTGPLHVGHGRGAAIGDCLSRLLEANGYDVTREFYYNDAGAQINNLALSVQSR-V 183 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGK-----ELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 + L +D + P Y G Y+ V E E+ + + +++++V + Sbjct: 184 KGLTPDDENWPADGYRGDYITDVANAYLAGETVTADDREVTGKADPEDQQAIQEFAVAYL 243 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 + DLKA ++ D++ E + + + + ++ L GY YE Sbjct: 244 RREQDLDLKAFGVEFDVYFLESSLY--EDGKVEETVERLQENGYTYEH------------ 289 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 + ++T GDD DR + K DG YTYF D+AY K++RGF +I G+DH Sbjct: 290 ----DGAMWLKTTEFGDDKDRVMRKKDGGYTYFLPDVAYHLDKWQRGFTTVINEQGADHH 345 Query: 362 GYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 V R+ A A+ S K + +L ++V + R G +K+SKRAG ++T+R ++DEVG Sbjct: 346 STVTRVRAGLQALSASIPKGWPDYVLHQMVMVTRSGQEVKISKRAGSYVTVRDLIDEVGR 405 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ RF + R+ L FD + Q+ ENPV+Y+QYA+AR S+ R+ K+ + Sbjct: 406 DATRFFLAARRVDSQLTFDIDLARSQTNENPVYYIQYAHARICSVLRKLKEEGVERG--- 462 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 V E L LA+YP +IE++ +EP+ L YL DLA FH +++ Sbjct: 463 LNECVGDLSLLTLDEEKDLANQLAKYPELIESSAKLREPHHLTHYLRDLAGQFHTYYNAH 522 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V + + R+ L AV +I +GL+++GV +P+EM Sbjct: 523 K-------VLIEDTAIRDARVSLYLAVRQVIANGLDLLGVSAPDEM 561 >gi|332800368|ref|YP_004461867.1| arginyl-tRNA synthetase [Tepidanaerobacter sp. Re1] gi|332698103|gb|AEE92560.1| Arginyl-tRNA synthetase [Tepidanaerobacter sp. Re1] Length = 569 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 203/595 (34%), Positives = 324/595 (54%), Gaps = 39/595 (6%) Query: 4 FADFSSRLKN--------YLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSR 55 D ++++ L + + K + IE P+D HG +TN AMIL+R Sbjct: 1 MKDLKTQVQQKLMDIVMSALNKAIDDGALPIKDIPDFHIEVPQDKGHGDFATNIAMILAR 60 Query: 56 PLGLDPLTIAELIVARIKI--DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYG 113 + P I E+I R+ ++ + +AG GFIN YL P+++ ++S I+ G ++G Sbjct: 61 EAKMPPRKIGEVIAERVDTTHSNLIEKIEVAGPGFINFYLVPTWVNAVISDILKYGSDFG 120 Query: 114 RNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQ 173 R G+G KV +EFVSANPTGPMH+G+ R A +GD LAS++ G++VT+E+YINDAG Q Sbjct: 121 RCNTGEGKKVQVEFVSANPTGPMHMGNARGAALGDALASILEMVGFDVTKEFYINDAGNQ 180 Query: 174 INTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIV 233 I LS+ RY + L ++PEG Y G + K+L ++ L Sbjct: 181 IENFGLSLEARYLE-LMGKQGEIPEGGYHGEDIIEHMKDLIEQEGDRFLYMDSPTRRAYF 239 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 +Y+++ ++ ++ DL+ + D++ SE H + ++I L +GY YE Sbjct: 240 INYALEKNIERMKKDLENFGVHFDVWFSEQSLH--SSGKVNEVIKILTDRGYTYE----- 292 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353 L F+++ G+ D L++++G TYFA+D+AY K K++RGFD +I Sbjct: 293 -----------KDGALWFKASQFGETKDEVLIRANGLPTYFASDIAYHKNKFDRGFDWVI 341 Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 + G+DH G++ R++ A+ ++ V++ +LVRLYR+G +MSKR G +TL + Sbjct: 342 NIWGADHHGHIARMKGALEALGYDPDKLTVIIMQLVRLYRNGEIARMSKRTGRAVTLADI 401 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 V+EVG D+ RF R LDFD +QS +NPV+YVQYA+AR SI RQAK+ Sbjct: 402 VEEVGKDAARFFFNLRSADTHLDFDLDLAIKQSDDNPVYYVQYAHARISSILRQAKEQGV 461 Query: 474 DL-DFDLFPRNVIP--QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 D+ + + +N + + + SE++LI LA++P I+ A PY++ Y +LAS Sbjct: 462 DIPNVNNLTQNDMNKYADLLIEESEIELIKKLADFPGEIKLAADNLAPYRITVYSQELAS 521 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 FH ++ R V + + LT RL LV AV +I + L I+G+ +P+ M Sbjct: 522 AFHSFYNKCR-------VLTDAQDLTTARLLLVMAVQQVIKNALAILGISAPDRM 569 >gi|67458501|ref|YP_246125.1| arginyl-tRNA synthetase [Rickettsia felis URRWXCal2] gi|75537032|sp|Q4UN98|SYR_RICFE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|67004034|gb|AAY60960.1| Arginyl-tRNA synthetase [Rickettsia felis URRWXCal2] Length = 576 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 246/585 (42%), Positives = 365/585 (62%), Gaps = 9/585 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +F ++LK + ++ ++I + IE P+D +G LS+N AMI++ + Sbjct: 1 MNIF----NQLKQDIIAASKQLYNNQEIANTANIETPKDNFNGDLSSNIAMIIAAKESIS 56 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A + P + S+ IAG GFIN + + + I+ ++ I K Sbjct: 57 PREVALKFKEVLTTLPYIASIEIAGPGFINFTIKAESWQASIKDILQHEEKFFEIDIDKS 116 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +NIE+VSANPTGPMH+GH R AV GD LA ++ GY VT+EYY+NDAG+QIN L + Sbjct: 117 RNINIEYVSANPTGPMHIGHARGAVYGDVLARILQKVGYSVTKEYYVNDAGSQINDLVST 176 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V RY++AL +P G YPG YL +G+ LA +Y ++LL E + IVK+++V+ Sbjct: 177 VLLRYREAL-GEKITIPAGLYPGEYLIPLGQILAKEYGNKLLTMNENERFKIVKNFAVEK 235 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 M+ + R DL L I+HDIF SE H D I + L G +YEG LP PK K + Sbjct: 236 MLDLNRKDLADLGIKHDIFFSEQSLH--DKGEIEGTVKLLTGMGLIYEGTLPAPKGKVHE 293 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + D +R Q LF+ST GD DRP+ K+DGS++YFA+DLAY K K +RG +++IYV+G+DH Sbjct: 294 EWD-NRVQKLFKSTNYGDSQDRPIEKADGSWSYFASDLAYAKDKIDRGANHLIYVLGADH 352 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 SGYVKR+EA+ A+ +++ +++V +C+LV +G+P+KMSKR G+F +++ V EVG D Sbjct: 353 SGYVKRIEAIVKALGKEQVKVDVKICQLVNFVENGVPVKMSKRLGNFASVQDVNHEVGKD 412 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +RFMML R+N + LDFD KVKEQS+ENP+FYVQYA+ R SI +A+++ P+ ++ F Sbjct: 413 IIRFMMLTRQNDKPLDFDLVKVKEQSRENPIFYVQYAHVRTISILSKARELMPE-SYNNF 471 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 E+++I LA + + +E + EP+++AFYL +LAS FH W+ G+ Sbjct: 472 EEGKYDLSLLSSEEEIEIIKLLASWTKTLEASAKYFEPHRIAFYLINLASRFHSMWNFGK 531 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 EN RFV +N++LT+ RL L A+ +I SGL +IGVE + M Sbjct: 532 ENSDYRFVIESNKELTLARLALASAIQKVIASGLEVIGVEPMDRM 576 >gi|229136179|ref|ZP_04264932.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-ST196] gi|228647338|gb|EEL03420.1| Arginyl-tRNA synthetase [Bacillus cereus BDRD-ST196] Length = 556 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 205/587 (34%), Positives = 326/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEDLVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV IEFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQIEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL + ++PE Y G + +GK LA+++ E+ + Y + Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL + + D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLASFRVNFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EGGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ + D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLAIGGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|103486626|ref|YP_616187.1| arginyl-tRNA synthetase [Sphingopyxis alaskensis RB2256] gi|98976703|gb|ABF52854.1| arginyl-tRNA synthetase [Sphingopyxis alaskensis RB2256] Length = 575 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 259/586 (44%), Positives = 363/586 (61%), Gaps = 13/586 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M LF FS + L + + + + + +E PRD AHG ++TNAAM+L++ G+ Sbjct: 1 MTLFRRFSDHIGAALDALAARDAIPAGLDRSAVSVEPPRDAAHGDIATNAAMVLAKSAGM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A+L+ + +V +AG GFINL L+ R+ L+ I +YGR+ +G+ Sbjct: 61 NPRALADLLAVELGALDEVVEAGVAGPGFINLRLADDSWREELALIHDLRGDYGRSTMGQ 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +VN+E+VSANPTGPMHVGHCR AVVGD LA+L+ ++G+EV REYY+NDAGAQ++ LA Sbjct: 121 GRRVNVEYVSANPTGPMHVGHCRGAVVGDALAALLEYAGHEVIREYYVNDAGAQVDVLAR 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY++AL +PEG YPG YL VG++LA ++ PE WL + + +V Sbjct: 181 SVHMRYREALGEEVGAIPEGLYPGDYLIPVGEKLAAEHGDRFAAAPESAWLALFRAEAVG 240 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AMM +IR DL L I HDIF SE + L QG VY+GIL PK +T Sbjct: 241 AMMDMIRADLAKLGIHHDIFSSEAELQA--AGKPAAAEKLLREQGLVYDGILEAPKGETP 298 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + L FRST GDD DRP+ KSDGS+TYF ADLAY K E D +I + G+D Sbjct: 299 EDWEPVELPL-FRSTQFGDDQDRPIRKSDGSWTYFGADLAYHFQKSET-ADELIDIWGAD 356 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H+G VKR++A AA++ K + +V L ++VRL ++G P KMSKRAG+F+TL VVDEVG Sbjct: 357 HAGTVKRIKAAVAALTGGKTRFDVKLVQMVRLLKNGEPFKMSKRAGNFVTLADVVDEVGK 416 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+VRF ML RK +DFDF +V E S++NPV+Y+QYA AR + R+A D L Sbjct: 417 DAVRFTMLTRKADAQMDFDFARVVEASRDNPVWYLQYANARISRLRRKAADAGIVLP--- 473 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 P +EL L+ LA++PR++E A A+EP+++AFYL D+A+ FH ++ G Sbjct: 474 -----APAPERLRANELALVKLLAQFPRIVEAAAFAREPHRIAFYLADVAAAFHAWYNLG 528 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ R V N+ +LT RL L + II +GL ++GVE+ EM Sbjct: 529 NDDSAARIVLDNDPELTATRLYLADGIGQIIRNGLQLMGVEALEEM 574 >gi|169832318|ref|YP_001718300.1| arginyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C] gi|238688349|sp|B1I6Q5|SYR_DESAP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|169639162|gb|ACA60668.1| arginyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C] Length = 563 Score = 572 bits (1474), Expect = e-161, Method: Composition-based stats. Identities = 194/585 (33%), Positives = 319/585 (54%), Gaps = 31/585 (5%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 L A L+ ++ + ++ + +E PR+ HG +TN A++L++P P Sbjct: 8 LRAGIERALRGAVEAARPDLGLDSGTAIPPFTVEVPREKNHGDFATNLALLLTKPARRSP 67 Query: 62 LTIAELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 IAE++V+ + + V V +AG GFIN L P++L +L I G YGR +G G Sbjct: 68 RQIAEILVSHLSLPELLVKEVTVAGPGFINFRLDPNWLHGVLPEIETWGEHYGRRNLGGG 127 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KV +EFVSANPTG +H+G+ R A +GD++A+L++F G++VTRE+Y+NDAG Q+ LALS Sbjct: 128 RKVQVEFVSANPTGLLHMGNARGAALGDSIAALLSFVGFDVTREFYVNDAGHQVENLALS 187 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 + RY QAL D +PE Y G L ++ + ++ + ++++ Sbjct: 188 MEARYFQAL-GRDWPVPEDGYHGEDLIDTAGRFVAEHGDRFASGDPDERRGALLRFALEE 246 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 + +R L++ +++D++ SE + D + + ++ L ++G++YE Sbjct: 247 KLAAMRATLESFGVRYDVWFSEQSLY--DRGVVGETLELLKKRGHLYE------------ 292 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 L F++ G D D L++ +G TYFAAD+AY K KY+RGFD +I V G+DH Sbjct: 293 ----RDGALWFKAGAFGGDKDEVLVRRNGVPTYFAADIAYHKDKYDRGFDWVINVWGADH 348 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 G+V R++ AA+ ++V++ +LVRLYR G ++MSKR G ++TL +++EVG D Sbjct: 349 HGHVPRMKGALAALGYDPDALDVVIMQLVRLYRGGEIVRMSKRTGRYVTLDELLEEVGRD 408 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 + R+ + R LDFD K ++ ENPV+Y+QYA+AR SIFRQ ++ Sbjct: 409 AARYFFVTRGADSHLDFDLDLAKSRTNENPVYYIQYAHARISSIFRQLEERGRTAPG--- 465 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 R + + +E LI LA++P + A P+++A Y++DLA +FH ++ R Sbjct: 466 YRKIPDVTLLKEEAERALIRRLADFPDEVAQAAYDLAPHRIAHYVHDLAGLFHHFYNAHR 525 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V L RL LV+ ++ + L ++GV +P M Sbjct: 526 -------VLGAGDGLEEARLMLVNCTRVVLRNALTLLGVSAPERM 563 >gi|229014529|ref|ZP_04171646.1| Arginyl-tRNA synthetase [Bacillus mycoides DSM 2048] gi|228746749|gb|EEL96635.1| Arginyl-tRNA synthetase [Bacillus mycoides DSM 2048] Length = 556 Score = 572 bits (1474), Expect = e-161, Method: Composition-based stats. Identities = 205/587 (34%), Positives = 326/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEDLVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV IEFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQIEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL + ++PE Y G + +GK LA+++ E+ + Y + Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL++ + D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLESFRVNFDVWFSETSLYKN--GKIDQALAVLKERDEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EGGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|183984076|ref|YP_001852367.1| arginyl-tRNA synthetase ArgS [Mycobacterium marinum M] gi|238690961|sp|B2HR81|SYR_MYCMM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|183177402|gb|ACC42512.1| arginyl-tRNA synthetase ArgS [Mycobacterium marinum M] Length = 550 Score = 572 bits (1474), Expect = e-161, Method: Composition-based stats. Identities = 196/582 (33%), Positives = 297/582 (51%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LK+ + + ++ L + +V+ERPR+ HG ++N A+ L++ +G +P Sbjct: 4 ADLAELLKSTATAVLSEHALDTSALPQTVVVERPRNPEHGDYASNVALQLAKKVGANPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A I + + S +AG GFINL L S KI+++I+ +G +G + + KV Sbjct: 64 LAGWIAEALTKADGIASAEVAGPGFINLRLETSAQAKIVNAIIDAGSGFGHSELMAAHKV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L++ G +V REYY ND GAQI+ A S+ Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGADVVREYYFNDHGAQIDRFANSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + P+ Y G Y+ + + K L+ P+ + ++ V M Sbjct: 184 AAK------GEPTPDDGYAGTYINDIAARVLQKAPDA-LSLPDAQMHETFREIGVDLMFS 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I++ L D++ ED H + + L G +YE Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMH--STGRVDQAVARLRETGNIYE--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 RS+ GDD DR ++KSDG Y A DLAY+ K ERGFD IY++G+DH GY Sbjct: 280 -KDGATWLRSSSFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRERGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA E A + VL+ ++V L RDG P++MSKRAG ITL +V+ +G D+ R Sbjct: 339 IARLKAAAAAFGEDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D S ENPV+YVQYA+AR ++ R A ++ D D Sbjct: 399 YSLIRSSVDTPIDIDLALWSSASNENPVYYVQYAHARLSALARNAAELGLIPDTDHL--- 455 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 E E L+ L ++PR+++ A +EP+++ YL DLA +H + R P Sbjct: 456 ----ELLSHEKEGVLLRTLGDFPRMLKTAASLREPHRVCRYLEDLAGDYHRFYDSCRVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +L RL L A +I +GL I+GV +P M Sbjct: 512 QG---DEEPTQLHTARLALCQATRQVIANGLGILGVTAPERM 550 >gi|42520278|ref|NP_966193.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila melanogaster] gi|81652693|sp|Q73HY6|SYR_WOLPM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|42410016|gb|AAS14127.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila melanogaster] Length = 568 Score = 571 bits (1473), Expect = e-161, Method: Composition-based stats. Identities = 264/586 (45%), Positives = 371/586 (63%), Gaps = 18/586 (3%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +F SS + + L E+ + + + I IE P + HG + TN AM+L++ + Sbjct: 1 MNIFKQISSLIFSKLNELKQRGVISTSAANFI-IEPPSNRVHGDIYTNVAMVLAKHEKKN 59 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P+ IAE++ ++ +V V IAG GFIN++L IL I E+G IG Sbjct: 60 PIEIAEVLAKEFELFDEVAKVEIAGSGFINMHLKIEVWHGILKQINELKTEFGTLDIGNN 119 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +N+EFVSANPTGP+H+GH R AV GD LA+L+ GY+VT+EYYINDAGAQI+TL S Sbjct: 120 QAINVEFVSANPTGPLHIGHARGAVFGDVLANLLKKVGYKVTKEYYINDAGAQIDTLIRS 179 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V+ RY++AL + +G YPG YLK +G LA KY +ELL E++ +++DY++ + Sbjct: 180 VYLRYKEAL-GEKISIEKGLYPGEYLKPIGTGLAKKYGAELL---EKQDNQVIRDYTLSS 235 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 +++II++D+ L + HD+F SE + + I + I L+ +G VYEG L PK K ++ Sbjct: 236 ILEIIKEDMNLLGVNHDVFTSEYELQK--SGKIEESIKILSDKGLVYEGYLEKPKGKESE 293 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 RK++LFRST GDDVDR L K DGS+TYFA+D+AY K RGF+NMI +GSDH Sbjct: 294 NWT-SRKEMLFRSTKFGDDVDRALKKEDGSWTYFASDIAYHFDKISRGFNNMIVELGSDH 352 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GYVKRL+AV +A+S+ +A+I V L +V + +G P+KMSKR+G+F+T R VV+EVG D Sbjct: 353 GGYVKRLKAVVSALSDDQAKIEVKLHNIVNFFENGKPVKMSKRSGNFLTARDVVEEVGRD 412 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 RF+ML RKN +LDFDF KVKEQSK+NP+FYVQYA+AR S+ R A P D L Sbjct: 413 ITRFIMLTRKNDMVLDFDFAKVKEQSKDNPIFYVQYAHARAHSLMRNAPKELPTADPSLL 472 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 EL LI LA++P V+E A EP+++ FYL ++A FH W +G+ Sbjct: 473 RTGG----------ELFLIKTLAKWPDVVEIAARLCEPHRITFYLLEVAEAFHVLWGYGK 522 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586 + +RF+ +N LT R+ LV A+A +I SGL+I +E EMS Sbjct: 523 SDLNMRFILEDNLNLTAARMFLVQALAHVIASGLSIFNIEPLEEMS 568 >gi|227824820|ref|ZP_03989652.1| arginyl-tRNA synthetase [Acidaminococcus sp. D21] gi|226905319|gb|EEH91237.1| arginyl-tRNA synthetase [Acidaminococcus sp. D21] Length = 552 Score = 571 bits (1473), Expect = e-161, Method: Composition-based stats. Identities = 203/585 (34%), Positives = 316/585 (54%), Gaps = 33/585 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + + + +++ +++ + +V P A G +TN A+ +R Sbjct: 1 MDIKKVLTEAVSEAVQKAIQAGTLKEGKMVPLVFTVPPQKAFGDFATNFALQAARNFHCP 60 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P IA+ +V + + + +AG GF+N YL +L + L+ I+ G YG G Sbjct: 61 PRVIADAVVKYLDCSAV-EKMEVAGPGFLNFYLKSDWLYEGLARILEKGESYGNLPKKAG 119 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 K+ IEFVSANPTGP+HVGH R A VG +LA+LM +GY+VTREY INDAG Q++ LALS Sbjct: 120 EKIQIEFVSANPTGPLHVGHGRGAAVGSSLANLMLAAGYDVTREYLINDAGNQMHNLALS 179 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V RY + L+ + PE Y G + + + +KY + L+ E + L + + Sbjct: 180 VNARYLE-LFGKEVSFPENGYHGEDIIVTARRIKEKYGDKFLHMEETERLSAFQTLAKDE 238 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 + +R+DL+A N + D++ SE H D I++ +D L ++ YVYE Sbjct: 239 KLAALREDLEAFNCKFDVWFSEQSLH--DAGKIKEAVDTLQKKDYVYE------------ 284 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 L FRST GDD DR +++ +G TYFAAD+AY + K++RGFD +I + G+DH Sbjct: 285 ----KGGALWFRSTKFGDDKDRVVIRDNGVSTYFAADIAYHQNKFQRGFDRIINLWGADH 340 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY+ R++A A+ + + +L+ ++V LYR+G +KMSKR G +TL +++EVG+D Sbjct: 341 HGYITRVKAAMEALGYDPSHLEILILQMVSLYRNGELVKMSKRTGKAVTLNELIEEVGTD 400 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 + R+ + R LDFD E S +NPV+YVQYA+AR SI +Q ++ LD Sbjct: 401 AARYFFIMRSMDSQLDFDLTLATEHSNDNPVYYVQYAHARICSILKQMEEEHIALD---- 456 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 + E+ LI L +Y ++E A + P+K+A Y+Y+LA +FH ++ R Sbjct: 457 --PHCDLSVLGEPVEIDLIKKLGDYEDLVETAAAERAPHKIAHYVYELAGIFHSFYNQCR 514 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V + KL RL L+ A + GL I+GV +P+ M Sbjct: 515 -------VLGVDPKLQQARLALIMATRHTLRHGLMILGVSAPDHM 552 >gi|88705210|ref|ZP_01102921.1| Arginyl-tRNA synthetase, class Ic [Congregibacter litoralis KT71] gi|88700300|gb|EAQ97408.1| Arginyl-tRNA synthetase, class Ic [Congregibacter litoralis KT71] Length = 560 Score = 571 bits (1473), Expect = e-161, Method: Composition-based stats. Identities = 194/586 (33%), Positives = 304/586 (51%), Gaps = 37/586 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 ++ L L I + + + +ER RD AHG L++N A+ ++ L + P +A+ Sbjct: 5 VAALLSEALTTIITARQADI-TAPEVQVERTRDAAHGDLASNIALASAKLLKMPPRELAQ 63 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 I + + +D IAG GFIN +LS L ++ G YG N G G KV +E Sbjct: 64 TICDALPENTVIDRTVIAGPGFINFFLSKDSQAAALLQVLSEGPRYGHNDSGAGRKVQVE 123 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+HVGH R A VGD+LA ++ G+EV RE+Y NDAGAQIN LALSV R Sbjct: 124 FVSANPTGPLHVGHGRGAAVGDSLARILNACGWEVVREFYYNDAGAQINNLALSVQARC- 182 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGK-----ELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 + L D+ PE Y G Y+ + + E + + + + L +++++V + Sbjct: 183 KGLTPQDATWPEDSYRGDYIAELAQAYLAGESVEATDKSVTATGDAEDLDAIREFAVAWL 242 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 + DL++ + D+F E + + + +D L G Y Sbjct: 243 RREQDLDLQSFGVAFDVFFLESSLY--ESGEVATTVDRLVESGNTY-------------- 286 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 + L R+T GDD DR + K DG YTYF D+AY K+ RGF+ +I G+DH Sbjct: 287 --SNDDALWLRTTDFGDDKDRVMRKKDGGYTYFLPDVAYHLNKWRRGFERVINEQGADHH 344 Query: 362 GYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 V R+ A A+ + +L ++V + RDG +K+SKRAG ++TLR +++EVG Sbjct: 345 STVTRVRAGLQALKEGIPEGWPEYVLHQMVTVMRDGQEVKLSKRAGSYLTLRDLINEVGR 404 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ ++ R + L FD QS +NPVFY+QYA+AR S+ R+ + L+ Sbjct: 405 DATRYFLVARSPNSQLTFDIDLALSQSNDNPVFYIQYAHARVCSVRRKFVEAELSLE--- 461 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + E + E++++ LA +P ++ A + EP ++A YL DLA FH +++ Sbjct: 462 LNPETLSLERLIEPQEVEVLKQLARFPEIVTRAGTSAEPQQIANYLRDLAGEFHAYYNAH 521 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ +L RL L AV +I +GL+++GV +P M Sbjct: 522 K-------VLIDDAELRTARLALTTAVGQVIANGLDLLGVSAPESM 560 >gi|229176040|ref|ZP_04303534.1| Arginyl-tRNA synthetase [Bacillus cereus MM3] gi|228607384|gb|EEK64712.1| Arginyl-tRNA synthetase [Bacillus cereus MM3] Length = 556 Score = 571 bits (1473), Expect = e-161, Method: Composition-based stats. Identities = 205/587 (34%), Positives = 327/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV IEFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQIEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL + ++PE Y G + +GK LA+++ E+ + Y + Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL++ ++ D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDAALAVLKERDEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EGGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLAAGGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNSLAIVGVSAPEKM 556 >gi|242281146|ref|YP_002993275.1| arginyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638] gi|259511640|sp|C6BU27|SYR_DESAD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|242124040|gb|ACS81736.1| arginyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638] Length = 547 Score = 571 bits (1473), Expect = e-160, Method: Composition-based stats. Identities = 212/578 (36%), Positives = 334/578 (57%), Gaps = 34/578 (5%) Query: 8 SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 L+N L I E ++ VIE P+D G +S N AM+LS+ ++P IAE Sbjct: 4 KQHLENVLGSILEAKGWE--WPEKAVIEPPKDKKFGDMSANIAMMLSKQAKMNPRAIAET 61 Query: 68 IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127 I + + D ++ V IAG GF+N S S+ + ++ ++ G +YGR+ IGK TK+ +E+ Sbjct: 62 IQSELDGDKYIEKVDIAGPGFLNFTFSNSFWQDLIPEVLTKGEDYGRSEIGKDTKIQVEY 121 Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187 VSANPTGP+H+GH R A +GD L ++ F+GY+V EYY+NDAG Q+ L S++ R QQ Sbjct: 122 VSANPTGPLHIGHGRGAALGDCLVRILEFTGYDVEAEYYVNDAGRQMLILGTSIWVRLQQ 181 Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247 + + +D PE +Y G Y+K + E+ ++ + +L+ +++ + I ++Y +++ I+ Sbjct: 182 SQGRDIAD-PEDFYKGEYIKDLAAEVLER-NPGILDMSDDEAIAICREYGKDEILEGIKK 239 Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307 DL A +++HD++ SE + + + +L +G YE + Sbjct: 240 DLAAFDVRHDVWFSEKSLVT--ANKVEETFADLKARGMAYE----------------EDG 281 Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367 L F+ST +GDD DR L KS+G TYFA+D+AY KY+RGFD ++ + G+DH GY+ R+ Sbjct: 282 ALWFKSTELGDDKDRVLRKSNGDLTYFASDIAYHDDKYKRGFDIVVDIWGADHHGYIPRM 341 Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 +A A+ KK Q++V+L +LV L R G I MS RAG F TL VV+EVG D+ RFM L Sbjct: 342 QAAVEALG-KKGQLDVILVQLVNLLRGGEQIAMSTRAGKFETLEDVVNEVGRDASRFMFL 400 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487 RK+ LDFD VK+++ +NPV+YVQYA+AR S+ R+A D + + P Sbjct: 401 SRKSDSHLDFDLELVKQKTMDNPVYYVQYAHARICSVMRKAADQGIAVP----AIDAAPL 456 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 + + EL L+ + ++ V ENA P+ +++YL DLAS H +S Sbjct: 457 SALTNAEELNLMKLMDQFADVAENAGKNMSPHVISYYLRDLASALHRFYSMHH------- 509 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + + RL L+ AVA + +GL+++GV +P M Sbjct: 510 ILSADEDVIAARLVLLQAVARTLANGLSLLGVSAPESM 547 >gi|229020582|ref|ZP_04177323.1| Arginyl-tRNA synthetase [Bacillus cereus AH1273] gi|229026799|ref|ZP_04183131.1| Arginyl-tRNA synthetase [Bacillus cereus AH1272] gi|228734522|gb|EEL85184.1| Arginyl-tRNA synthetase [Bacillus cereus AH1272] gi|228740720|gb|EEL90977.1| Arginyl-tRNA synthetase [Bacillus cereus AH1273] Length = 556 Score = 571 bits (1473), Expect = e-160, Method: Composition-based stats. Identities = 204/587 (34%), Positives = 327/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +++E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVILESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV IEFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQIEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL + ++PE Y G + +GK LA+++ E+ + Y + Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL++ ++ D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDAALAVLKERDEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EGGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|163943048|ref|YP_001647932.1| arginyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] gi|163865245|gb|ABY46304.1| arginyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4] Length = 556 Score = 571 bits (1472), Expect = e-160, Method: Composition-based stats. Identities = 205/587 (34%), Positives = 326/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEDLVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV IEFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQIEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL + ++PE Y G + +GK LA+++ E+ + Y + Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKRLAEEFGDRYAKADAEESYEFYRSYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL + + D++ SE ++ I + L ++ ++E Sbjct: 240 KYELAKLQKDLASFRVNFDVWFSETSLYKN--GKIDQALAVLKQRDEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EGGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|229490016|ref|ZP_04383869.1| arginyl-tRNA synthetase [Rhodococcus erythropolis SK121] gi|229323117|gb|EEN88885.1| arginyl-tRNA synthetase [Rhodococcus erythropolis SK121] Length = 550 Score = 571 bits (1472), Expect = e-160, Method: Composition-based stats. Identities = 186/582 (31%), Positives = 299/582 (51%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + L+ + ++ +L + +ERPR+ HG +TN AM +++ +G +P Sbjct: 4 ADLAELLRGTAASVLADRGLDVSVLPETLTVERPRNPEHGDYATNIAMQVAKKVGTNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A I + ++S IAG GF+N+ L I+ S++ +G YG G K+ Sbjct: 64 LAGWIAEALTAADGIESAEIAGPGFLNIRLDKDAQGAIVVSVLEAGASYGSGDSLAGKKI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L +++ G VTREYY ND GAQI+ + S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRILSAQGGLVTREYYFNDHGAQIDRFSRSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + + K ++++ P ++ + V+ M Sbjct: 184 AAK------GEPAPEDGYAGAYIADIAASVL-KQRPDVMDLPADEQQETFRAIGVELMFT 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L + D++ E+ + + +++L G ++ Sbjct: 237 HIKQTLHDFGVDFDVYFHENSLF--ESGAVEKAVESLKGSGNLFH--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 + +ST GDD DR ++KSDG+ Y A D+AYF+ K RGFD IY++G+DH GY Sbjct: 280 -EDGAWWLKSTDYGDDKDRVVIKSDGNAAYIAGDIAYFQNKRARGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA + + VL+ ++V L +DG +KMSKRAG ITL +V+ +G D+ R Sbjct: 339 IGRLKAAAAAFGDDPDTVEVLIGQMVNLVKDGTAVKMSKRAGTVITLDDLVEAIGVDASR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 ++M+ +D D + S ENPV+YVQYA+AR +I R A D+ D Sbjct: 399 YVMIRSSVDSSIDIDLDLWTKTSSENPVYYVQYAHARLSAIARNAADLGLSADASNLALL 458 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + QE + LI + EYPRV+ +A +EP+++A YL +LA +H + R P Sbjct: 459 TVEQEGD-------LIRTIGEYPRVVSSAANLREPHRIARYLEELAGAYHRFYGACRILP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + RL L A ++ +GL ++GV +P +M Sbjct: 512 QG---DEDATDVHRARLALCAATRQVLANGLELLGVTAPEQM 550 >gi|226307411|ref|YP_002767371.1| arginyl-tRNA synthetase [Rhodococcus erythropolis PR4] gi|259511654|sp|C1A1Z7|SYR_RHOE4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|226186528|dbj|BAH34632.1| arginyl-tRNA synthetase [Rhodococcus erythropolis PR4] Length = 550 Score = 571 bits (1472), Expect = e-160, Method: Composition-based stats. Identities = 186/582 (31%), Positives = 298/582 (51%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + L+ + ++ +L + +ERPR+ HG +TN AM +++ +G +P Sbjct: 4 ADLAELLRGTAASVLADRGLDVSVLPETLTVERPRNPEHGDYATNIAMQVAKKVGTNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A I + ++S IAG GF+N+ L I+ S++ +G YG G K+ Sbjct: 64 LAGWIAEALTAADGIESAEIAGPGFLNIRLDKDAQGAIVVSVLEAGSSYGSGDSLAGKKI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L +++ G VTREYY ND GAQI+ + S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRILSAQGGLVTREYYFNDHGAQIDRFSRSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + + K +++ P ++ + V+ M Sbjct: 184 AAK------GEPAPEDGYAGAYIADIAASVL-KQRPDVMELPADEQQETFRAIGVELMFT 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L + D++ E+ + + +++L G ++ Sbjct: 237 HIKQTLHDFGVDFDVYFHENSLF--ESGAVEKAVESLKGSGNLFH--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 + +ST GDD DR ++KSDG+ Y A D+AYF+ K RGFD IY++G+DH GY Sbjct: 280 -EDGAWWLKSTDYGDDKDRVVIKSDGNAAYIAGDIAYFQNKRARGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA + + VL+ ++V L +DG +KMSKRAG ITL +V+ +G D+ R Sbjct: 339 IGRLKAAAAAFGDDPDTVEVLIGQMVNLVKDGTAVKMSKRAGTVITLDDLVEAIGVDASR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 ++M+ +D D + S ENPV+YVQYA+AR +I R A D+ D Sbjct: 399 YVMIRSSVDSSIDIDLDLWTKTSSENPVYYVQYAHARLSAIARNAADLGLSADASNLALL 458 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + QE + LI + EYPRV+ +A +EP+++A YL +LA +H + R P Sbjct: 459 TVEQEGD-------LIRTIGEYPRVVSSAANLREPHRIARYLEELAGAYHRFYGACRILP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + RL L A ++ +GL ++GV +P +M Sbjct: 512 QG---DEDATDVHRARLALCAATRQVLANGLELLGVTAPEQM 550 >gi|229034001|ref|ZP_04188951.1| Arginyl-tRNA synthetase [Bacillus cereus AH1271] gi|228728309|gb|EEL79335.1| Arginyl-tRNA synthetase [Bacillus cereus AH1271] Length = 556 Score = 571 bits (1471), Expect = e-160, Method: Composition-based stats. Identities = 205/587 (34%), Positives = 327/587 (55%), Gaps = 33/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M +K ++ K ++ ++ + +V+E P+D +G STN AM L+R Sbjct: 1 MNSLEQVKGLIKEEIQAAVLKAELATEEQIPNVVLESPKDKTNGDFSTNMAMQLARVAKK 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P IAE +VA K ++ + IAG GFIN Y+ SYL ++ +IV +G YG G Sbjct: 61 APRMIAEELVANFDKAKASIEKIEIAGPGFINFYMDNSYLTDLIPTIVNAGEAYGETNTG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG KV IEFVSANPTG +H+GH R A VGDTL +++A +GY+V+REYYINDAG QI+ LA Sbjct: 121 KGEKVQIEFVSANPTGDLHLGHARGAAVGDTLCNVLAKAGYDVSREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LSV RY QAL + ++PE Y G + +GK LA+++ E+ + Y + Sbjct: 181 LSVEARYMQAL-GLEKEMPEDGYHGADIIGIGKLLAEEFGDRYAKADAEESYEFYRSYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + ++ DL++ ++ D++ SE ++ I + L + ++E Sbjct: 240 KYELAKLQKDLESFRVKFDVWFSETSLYKN--GKIDAALAVLKERDEIFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + FRS GDD +R L+K+DGSYTY D+AY + K ERGFD +I + G+ Sbjct: 288 ------EGGATWFRSMTYGDDKNRVLIKNDGSYTYLTPDIAYHRDKLERGFDKLINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ K + V + ++V+LY++G +KMSKR G +TLR +++EVG Sbjct: 342 DHHGYIPRMKAAIQALGYDKETLEVEIIQMVQLYQNGEKMKMSKRTGKAVTLRELMEEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPV+Y QYA+AR SI RQ +++ D Sbjct: 402 VDAMRYFFAMRSGDSHLDFDMDLAVSKSNENPVYYAQYAHARVCSILRQGEELGLATGGD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + V E++L+ L E+P V+ +A + P+++ Y ++LA+ H ++ Sbjct: 462 VNYKLV------TSEKEVELLKKLGEFPAVVADAAQKRLPHRITSYAFELAAALHSFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +L+ R +L+ AV + + + L I+GV +P +M Sbjct: 516 E------KVLNQDNLELSKARYELMKAVRTTLQNALAIVGVSAPEKM 556 >gi|162148009|ref|YP_001602470.1| arginyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|161786586|emb|CAP56168.1| Arginyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] Length = 597 Score = 571 bits (1471), Expect = e-160, Method: Composition-based stats. Identities = 258/597 (43%), Positives = 360/597 (60%), Gaps = 19/597 (3%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 LF + S +++ L+ I + ++ R+ + RD AHG ++TNAA++ ++ P Sbjct: 5 LFVRYLSHVRDALRRIVP--DLPDEVAARVELTPTRDPAHGDMATNAALLAAKIARRRPA 62 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 IA + A + P V AG GF+N+ L + LR I+ +++ +G YG +G+G + Sbjct: 63 EIAADLAAALAGVPGVAKAEPAGPGFVNVTLDAAVLRSIVPAVLGAGESYGDATLGQGVR 122 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VN+E+VSANPTGPMHVGHCR AVVGD LA+L+A +GY VT+EYYINDAGAQ+ LA + + Sbjct: 123 VNVEYVSANPTGPMHVGHCRGAVVGDALANLLAKAGYGVTKEYYINDAGAQVIALAWATY 182 Query: 183 WRYQQALYN--NDSDLPEG-----YYPGVYLKHVGKELADKYSSELLN-----FPEEKWL 230 WRY Q + + Y G YL VG+ LA+ + + L E WL Sbjct: 183 WRYLQVIGTTMGQEEFAALVPGGIQYGGDYLVPVGQALAEAHGTALAEPGAQPAAPEHWL 242 Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290 P VK + V MM +IR DL AL ++HD+F SE I L QG +YEG+ Sbjct: 243 PTVKSFVVAQMMAMIRQDLDALGVRHDVFTSEAKILA--DGITDRAIARLDAQGLLYEGV 300 Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350 L PPK K + + R Q LFRST GDDVDRPL KSDGS TYFA D+ Y K RG D Sbjct: 301 LEPPKGKLPEDWEA-RPQTLFRSTAFGDDVDRPLRKSDGSNTYFANDIGYHDDKILRGAD 359 Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEK--KAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 +I V G+DH GYV R++A A+ E +VLLC++VR+ RDG P++MSKRAG F+ Sbjct: 360 LLIDVWGADHGGYVTRMKAAVKALGEDGGTVDFDVLLCQIVRIVRDGQPVRMSKRAGTFV 419 Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 TLR ++DEVG D+VRF ML RK ++FD +V Q+++NPVFYVQYA+ARCRS+ R A Sbjct: 420 TLRDLIDEVGRDAVRFTMLTRKADAQMEFDLDQVVAQTRDNPVFYVQYAHARCRSVLRAA 479 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 +++ D + +EL L+ +A++PR +E A A EP+++AFYL +L Sbjct: 480 QEMLGARDVAPATLAQAALDGIESDAELALLRRIAQWPRTVEGAAQAHEPHRIAFYLGEL 539 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A FH W+ GR++ LRF+Q ++ T +L LV A A++I SGL ++GV EM Sbjct: 540 AGDFHTLWNRGRDDATLRFLQEDDLAATRAKLALVEATATVIRSGLAVLGVTPVEEM 596 >gi|167629021|ref|YP_001679520.1| arginyl-tRNA synthetase [Heliobacterium modesticaldum Ice1] gi|238687992|sp|B0TI89|SYR_HELMI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|167591761|gb|ABZ83509.1| arginyl-tRNA synthetase [Heliobacterium modesticaldum Ice1] Length = 563 Score = 571 bits (1471), Expect = e-160, Method: Composition-based stats. Identities = 200/589 (33%), Positives = 315/589 (53%), Gaps = 30/589 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI----LDRIVIERPRDCAHGHLSTNAAMILSRP 56 M R+ + + + K++ + +E PR+ HG +TN AM+++R Sbjct: 1 MNFVEAIRRRISAAVVQALEGARNAKEVNVGPIPPFALEVPREKQHGDFATNVAMLMARE 60 Query: 57 LGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116 ++P +AE IVARI + V +AG GFIN L ++L +L ++ + YG + Sbjct: 61 ARMNPRQLAEKIVARIDRGDWLKDVQVAGPGFINFTLHHAWLYPVLPAVQQADEAYGASK 120 Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176 +G G +V +EFVSANPTG +H+G+ R A +GDTLA+L+ +G++V +E+YINDAG QI Sbjct: 121 VGAGRRVQVEFVSANPTGLLHMGNARGAALGDTLANLLRLAGFDVQKEFYINDAGNQIEN 180 Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236 A S+ RY Q L D PE Y G + + L K + L ++ Y Sbjct: 181 FAKSLEARYLQLL-GRDVPFPEEGYHGEDIVETMRGLIAKEGDKYLALESSLRREMLVKY 239 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 +++ + IR L+ + +D++ SE H D I+ ++ L GY+YE Sbjct: 240 ALREKLDAIRRTLERFGVVYDVWFSEQSLH--DSGAIQQTLERLRANGYIYEN------- 290 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 L F++T +G++ D L++S+G TYFAAD+AY K K++RGFD +I + Sbjct: 291 ---------EGALWFKATALGEEKDEVLVRSNGIPTYFAADIAYHKNKFDRGFDWVINIW 341 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G+DH G+V R++ AV +++V+L +LVRLY+ G ++MSKR G +ITL +++E Sbjct: 342 GADHHGHVSRMKNAVKAVGYDPKKLDVILMQLVRLYKGGEIVRMSKRTGQYITLDELIEE 401 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG D+ RF + R LDFD K QS ENPVFYVQYA+AR SI R A++ + Sbjct: 402 VGKDAARFFFVMRGADAHLDFDLDLAKRQSSENPVFYVQYAHARICSILRTAQEAGYAVP 461 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 + +EL LI +A+ P + A EP+++A Y DLA++FH + Sbjct: 462 QGQQVEAGLDLTVLDHPAELALIRKIADLPDEVARAATQMEPHRMARYAQDLAALFHSFY 521 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +H R V + ++L RL LV ++ + L+ +G+ +P M Sbjct: 522 THCR-------VLTDEKELRDARLLLVDDSRIVLRNVLHCMGLTAPERM 563 >gi|239946988|ref|ZP_04698741.1| arginyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes scapularis] gi|239921264|gb|EER21288.1| arginyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes scapularis] Length = 576 Score = 571 bits (1471), Expect = e-160, Method: Composition-based stats. Identities = 248/585 (42%), Positives = 366/585 (62%), Gaps = 9/585 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +F ++LK + ++ ++I + IE P+D +G LS+N AMI++ + Sbjct: 1 MNIF----NQLKQDIIAASQQLYNNQEIANTATIETPKDSFNGDLSSNIAMIIAAKESIS 56 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A + P + S+ IAG GFIN + + + I+ ++ I K Sbjct: 57 PREVALKFKEVLITLPYIASIEIAGPGFINFTIKADSWQASIKDILQHEEKFFEIDIDKS 116 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +NIE+VSANPTGPMH+GH R AV GD LA ++ GY VT+EYY+NDAG+QIN L + Sbjct: 117 RNINIEYVSANPTGPMHIGHARGAVYGDVLARILQKVGYSVTKEYYVNDAGSQINDLVST 176 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V RY++AL +P G YPG YL +G+ LA +Y ++LL + + IVK+++V+ Sbjct: 177 VLLRYKEAL-GEQITIPVGLYPGEYLIPLGQILAKEYGNKLLTMNDAEKFKIVKNFAVEK 235 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 M+ + R DL L I+HDIF SE H D I + L R G +YEG LP PK K + Sbjct: 236 MLDLNRKDLANLGIKHDIFFSEQSLH--DKGEIEKTVKLLERMGLIYEGTLPAPKGKVHE 293 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + D +R Q LF+ST GD DRP+ K+D S++YFA+DLAY K K ERG +++IYV+G+DH Sbjct: 294 EWD-NRVQKLFKSTKYGDSQDRPIEKADRSWSYFASDLAYAKDKIERGANHLIYVLGADH 352 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 SGYVKR+EA+ A+ ++ +++V +C+LV +G+P+KMSKR G F +++ V EVG D Sbjct: 353 SGYVKRIEAIVKALGKEHVKVDVKICQLVNFVENGVPVKMSKRLGSFASVQDVNHEVGKD 412 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +RFMML R+N + LDFD KVKEQS+ENP+FYVQYA+ R SI +A+++ P+ ++ F Sbjct: 413 IIRFMMLTRQNDKPLDFDLVKVKEQSRENPIFYVQYAHVRTISILSKARELMPE-SYNSF 471 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 + E+++I LA + + +E +T EP+++AFYL +LAS FH W+ G+ Sbjct: 472 EASKYDLSLLSSEEEIEIIKLLAAWTKTLEASTKYFEPHRIAFYLINLASKFHSMWNFGK 531 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 EN RFV +N++LT+ RL L A+ +I SGL +IGVE N+M Sbjct: 532 ENSDYRFVIESNKELTLARLALASAIQKVIASGLEVIGVEPMNKM 576 >gi|158523225|ref|YP_001531095.1| arginyl-tRNA synthetase [Desulfococcus oleovorans Hxd3] gi|226701375|sp|A9A099|SYR_DESOH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|158512051|gb|ABW69018.1| arginyl-tRNA synthetase [Desulfococcus oleovorans Hxd3] Length = 556 Score = 571 bits (1471), Expect = e-160, Method: Composition-based stats. Identities = 200/580 (34%), Positives = 309/580 (53%), Gaps = 29/580 (5%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + ++ K + I +E PR HG +TN AM+ + + P IAE Sbjct: 5 LQAMIRAAATAAFEKGALTASRFPDIELEAPRFRDHGDFATNLAMVSASTQKMAPRKIAE 64 Query: 67 LIVARIKIDPDVD-SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 IVA + + IAG GFIN ++ P +L I +G +G G +V + Sbjct: 65 AIVAHLADSAGILLKTEIAGPGFINFFICPEAWLPVLHRIHEDQERFGACDLGGGKRVQV 124 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+HVGH R A VGD++A ++AF G++V REYY+NDAG QI TL SV R+ Sbjct: 125 EFVSANPTGPLHVGHGRGAAVGDSVARILAFCGWQVHREYYVNDAGNQILTLGRSVLLRW 184 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245 ++ L D PE Y G Y++ + +++ ++ L + + + ++ I Sbjct: 185 RE-LSGQAVDFPEDCYQGDYIRSIARQIDAEHRQALEKMESAEAVAFCARVAADQILDGI 243 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 R DL +I D + SE + + + L G VYE Sbjct: 244 RRDLADFSITFDQWFSEKSLV--ETGAVETTLARLKETGVVYES---------------- 285 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365 L F ++ GD+ DR +++++G TYFA+D+AY K K++RGF+ +I V G+DH GY+ Sbjct: 286 EGALWFATSRFGDEKDRVVVRNNGEATYFASDIAYHKNKFDRGFNRVIDVWGADHHGYIP 345 Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425 R++A AV + ++V+L +LV L R+G P+ MS R+G+F+TL+ V +EVG+D+ RF+ Sbjct: 346 RVKAAIGAVGRSQDDLDVILVQLVALLREGQPVSMSTRSGEFVTLKEVTNEVGADAARFI 405 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 L R LDFD K++S +NPV+YVQY +AR S+ ++A + + Sbjct: 406 FLSRHYDSPLDFDLELAKKKSNDNPVYYVQYVHARIASMLKKAAEEKGIGRVTAVDDKTL 465 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 + +E E+ L+ LA YP + +A EP+++ FYL DLA+ FHG++S + Sbjct: 466 RRLAE--PEEIDLVKLLARYPEAVSHAARFLEPHRITFYLLDLAAGFHGYYSRHK----- 518 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V + LTM RL LV AV +I +GL ++GV +P M Sbjct: 519 --VLTEDDGLTMARLYLVCAVKQVIKNGLALLGVSAPESM 556 >gi|89897692|ref|YP_521179.1| arginyl-tRNA synthetase [Desulfitobacterium hafniense Y51] gi|219670842|ref|YP_002461277.1| arginyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2] gi|122997116|sp|Q24MK7|SYR_DESHY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|254782959|sp|B8FZ89|SYR_DESHD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|89337140|dbj|BAE86735.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219541102|gb|ACL22841.1| arginyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2] Length = 561 Score = 571 bits (1471), Expect = e-160, Method: Composition-based stats. Identities = 208/594 (35%), Positives = 326/594 (54%), Gaps = 42/594 (7%) Query: 1 MYLFADFSSRL----KNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRP 56 M L+ + + E ++ + L V+E PR+ HG +TN AM+L++ Sbjct: 1 MSLYINIKDTIYANLAKAALEAQKAGELSFESLPNYVLEEPREKQHGDWATNLAMVLTKQ 60 Query: 57 LGLDPLTIAELIVARIKIDPDVDSV-FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115 P IA +++ + + + IAG GFIN L P++L ++ ++ +YG+ Sbjct: 61 ARKAPRDIATILIKHLDTEGTFITASEIAGPGFINFRLDPNWLTGVIPEVLNLEADYGKV 120 Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175 +G+G KV +EFVSANPTG +H+G+ R A +GD+LA+L+A +GYEV+RE+YINDAG QI Sbjct: 121 NLGQGKKVQVEFVSANPTGLLHMGNARGAALGDSLAALLAMAGYEVSREFYINDAGNQIY 180 Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235 ALS+ RY Q L D PEG Y G L K L +K ++ LN ++ + Sbjct: 181 NFALSLEARYLQ-LMGQDVPFPEGGYHGEDLIDTVKGLIEKVGNKYLNVDQDLRREFLVR 239 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 Y+++ + IR+ L + + +D + SE H D ++D ++ L +QGY+YE Sbjct: 240 YALEEKLTSIRETLTDMGVHYDCWFSEQSLH--DSGFVKDTMEKLEQQGYIYE------- 290 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 +ST+ GD+ D +++ +G+ TYFAAD+AY + K+ERGFD +I + Sbjct: 291 ---------KEGAQWLKSTLFGDEKDEVVVRGNGTPTYFAADIAYHRNKFERGFDRVINI 341 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 G+DH G+V R++ +A+ + ++L +LVRL ++G ++MSKR+G +ITLR ++D Sbjct: 342 WGADHHGHVARMKGAMSALGYDPENLQIILMQLVRLIQNGEVVRMSKRSGQYITLRELMD 401 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 EVG D+ RF + R ++FD K +S +NPV+YVQYA+AR SI RQA + Sbjct: 402 EVGKDAARFFFIMRDPDSTVEFDLDLAKAESSDNPVYYVQYAHARLCSILRQAAEQG--- 458 Query: 476 DFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 + IPQE E E +L+ +AE P IE A EP++LA Y+ DLA + Sbjct: 459 ----YNTAGIPQEGELKRLQSNEERELLKKIAELPNEIEVAARLTEPHRLARYVLDLAGL 514 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 FH ++ R V + L RL LV + ++ + L I+GV +P M Sbjct: 515 FHSFYNSQR-------VLVDEEGLREARLGLVRSTKQVLANVLGILGVTAPERM 561 >gi|304311986|ref|YP_003811584.1| Arginyl-tRNA synthetase [gamma proteobacterium HdN1] gi|301797719|emb|CBL45941.1| Arginyl-tRNA synthetase [gamma proteobacterium HdN1] Length = 586 Score = 570 bits (1470), Expect = e-160, Method: Composition-based stats. Identities = 206/615 (33%), Positives = 321/615 (52%), Gaps = 61/615 (9%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + S LK + + ++ ++ IER RD HG ++N AM+L++P GL P Sbjct: 1 MKSKIESLLKAAVAHLQAAHQLPSELSPTYQIERTRDKQHGDFASNLAMMLAKPAGLKPR 60 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +A+ +V + DP + IAG GFIN YL +I+ I+ G ++G + +G G Sbjct: 61 DLAQQLVNALPADPAIQKTEIAGPGFINFYLQDGSQYQIVPQILSQGAKFGHSKVGAGQY 120 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 + +EFVSANPTGP+HVGH R A G TLA+L+ G+ V REYY+NDAG Q+N LA SV+ Sbjct: 121 IQVEFVSANPTGPLHVGHGRGAAYGATLANLLDAVGFRVHREYYVNDAGRQMNILATSVW 180 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL--------NFPEEK------ 228 RY + L + P Y G Y+ + + + ++ L + P ++ Sbjct: 181 LRYLE-LCGVSFNFPSNGYKGGYILEISQAVLNQAGQTWLRSVEAVFQDIPADEPAGGDK 239 Query: 229 ------------------WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 + D ++ +++ IRDDL+ +++ + SE D Sbjct: 240 EEHIDSLIERAKQLLGKDGYKVFFDAALDSILGDIRDDLREFGVEYTEWFSEMSL--TDS 297 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 ++ ID L G +YE + FRST GDD DR + + +G Sbjct: 298 GSVQRAIDRLQTNGKLYE----------------KDGAIWFRSTEYGDDKDRVVARDNGQ 341 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFA+D+AY K+ERGFD +I V G+DH GY+ R++A +A+ ++ VLL + Sbjct: 342 TTYFASDIAYHMNKFERGFDRVINVWGADHHGYIARVKAALSALGYDPEKLTVLLVQFAI 401 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 LYR G ++MS R+G F+TLR + +EVG+D+ RF + RK+ + +DFD K QSK+NP Sbjct: 402 LYRGGERVQMSTRSGSFVTLRELREEVGNDAARFFYVTRKSEQHMDFDLDLAKSQSKDNP 461 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 ++Y+QYA+AR SI ++A D + + + E L+ LA+YP ++E Sbjct: 462 IYYIQYAHARVCSILKKAAAESAPWDRE---SGLAHLHLLDNDYEQGLLNQLAKYPELLE 518 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A + EP++LA YL DLA FH ++ + V + L RL L A+ +I Sbjct: 519 RAALQYEPHQLAQYLRDLAGEFHSWYNAHK-------VIIEDANLRNARLTLSEAIRQVI 571 Query: 571 NSGLNIIGVESPNEM 585 N+GL ++GV +P M Sbjct: 572 NNGLTLLGVSAPESM 586 >gi|94500579|ref|ZP_01307110.1| arginyl-tRNA synthetase [Oceanobacter sp. RED65] gi|94427369|gb|EAT12348.1| arginyl-tRNA synthetase [Oceanobacter sp. RED65] Length = 607 Score = 570 bits (1470), Expect = e-160, Method: Composition-based stats. Identities = 187/590 (31%), Positives = 311/590 (52%), Gaps = 36/590 (6%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + +S ++ L+ + ++ +I+++ +D AHG ++N AM+ S+ G++P Sbjct: 47 MKQELTSLIEQTLESLKQAGQLPADASPKIMVDNTKDKAHGDYASNIAMVSSKMAGMNPR 106 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 AE IV + P + IAG GFIN +++ + ++ +I+ + +G N GKG Sbjct: 107 QWAEEIVNALPDSPILKQAEIAGPGFINFFVTEAASFSVVETILDAKETFGHNDSGKGQS 166 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V +EFVSANPTGP+HVGH R A VGD ++ L+ +G++VTRE+Y NDAGAQI+ LALSV Sbjct: 167 VQVEFVSANPTGPLHVGHGRGAAVGDCISRLLEANGWKVTREFYYNDAGAQIDNLALSVQ 226 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGK-----ELADKYSSELLNFPEEKWLPIVKDYS 237 R + L +D+ PE Y G Y+ + + + + L ++ ++ Sbjct: 227 ARC-KGLTPDDAGWPEDGYRGEYILDLANSFMNGDTIESADQSFTGTKDADDLEGIRHFA 285 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 V + + DLKA + D++ E + + + + NL + GY YE Sbjct: 286 VAYLRREQDLDLKAFEVDFDVYFLESSLYA--DGKVEETVQNLIKNGYTYE--------- 334 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 D L ++T GDD DR + K DG YTYF D+AY + K++RGF +I G Sbjct: 335 -------DGGALWLKTTEFGDDKDRVMRKKDGGYTYFVPDVAYHQNKWQRGFKKVINEQG 387 Query: 358 SDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 +DH + R+ A A+ + + +L ++V + + G +K+SKRAG ++TLR ++D Sbjct: 388 ADHHSTITRVRAGLQALQAGIPEGYPDYVLHQMVTVMKGGEEVKISKRAGSYVTLRDLID 447 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 EVG D+ R+ + R S L FD + QS +NPV+Y+QYA+AR SI R+ + Sbjct: 448 EVGRDATRYFLAARAPSSQLTFDIDLARSQSNDNPVYYIQYAHARICSILRKLESEGQSW 507 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 D + + + E L LA +P V+ A P+++A YL++LAS FHG+ Sbjct: 508 DQ---HNGLSKLDRLEEDQEKLLANKLARFPEVVAIAGEQSAPHQVANYLHELASDFHGY 564 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++ + ++ L R+ L AV ++ +GL ++G+ +P EM Sbjct: 565 YNNHKT-------IVEDQDLRDARIALTQAVRQVLFNGLYLLGIAAPEEM 607 >gi|260881528|ref|ZP_05404644.2| arginine--tRNA ligase [Mitsuokella multacida DSM 20544] gi|260848689|gb|EEX68696.1| arginine--tRNA ligase [Mitsuokella multacida DSM 20544] Length = 546 Score = 570 bits (1470), Expect = e-160, Method: Composition-based stats. Identities = 204/579 (35%), Positives = 303/579 (52%), Gaps = 34/579 (5%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + ++ K+ + + + L ++++E P G +TN AM +R +P IAE Sbjct: 2 LTEAIEQAAKDAIREGALPEGELPQVILEVPPQKEFGDFATNFAMQSARVFHRNPRQIAE 61 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 + RI+ D +D IAG GF+N YL + L I+ +G +G K+ +E Sbjct: 62 ELAKRIEGD-WLDHTQIAGPGFLNFYLKGNVLYDSFQKILEAGEAFGNLPKLDHPKIQVE 120 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 +VSANPTG +HVGH R A G L +L+ +GY V EYYINDAG Q+N LA SV RY Sbjct: 121 YVSANPTGLLHVGHGRGAAAGSALVNLLRAAGYPVESEYYINDAGNQMNNLARSVNARYL 180 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 + L + PE Y G + + + D+ + L EE+ L I KD + + I++ Sbjct: 181 ELL-GKEVTFPEDGYHGQDIIDTAQRIIDRDGDKYLALSEEERLAIFKDLAYHEKLAILK 239 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 +DL+ ++ D + SE H P +R +++ L +G +YE Sbjct: 240 EDLERFHVTFDNWFSERTLH---PDAVRKVVEILKEKGDIYE----------------KE 280 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366 L +ST GDD DR +++ +G TY AAD+AY KYERGFD +I + G+DH GYV R Sbjct: 281 GALWLKSTAYGDDKDRVVIRDNGVPTYLAADIAYHHNKYERGFDRLINIWGADHHGYVCR 340 Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 ++A A+ ++ VLL ++V LYR G +KMSKR G +TL +++EVG+D+ R+ Sbjct: 341 VKAAMQALGHDPEKLTVLLLQMVSLYRGGELVKMSKRTGQSVTLNELMEEVGTDAARYFF 400 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 L R LDFD K++S +NPV+Y+QYA+AR SIFRQA++ L Sbjct: 401 LMRSLDSQLDFDLDLAKKKSNDNPVYYIQYAHARICSIFRQAEET------KLALGEAPH 454 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 E D SE+ LI + EYP + A P ++A Y YDLA++FH ++ R Sbjct: 455 LELLTDESEVALIKKIEEYPEEVAKAAADYAPQRIARYSYDLAALFHSFYNKCR------ 508 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + L RL LV A +I L I+GV +P M Sbjct: 509 -IMGVDHDLAEARLALVTVTAHVIRHSLGILGVSAPEHM 546 >gi|120553753|ref|YP_958104.1| arginyl-tRNA synthetase [Marinobacter aquaeolei VT8] gi|166232799|sp|A1TYU8|SYR_MARAV RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|120323602|gb|ABM17917.1| arginyl-tRNA synthetase [Marinobacter aquaeolei VT8] Length = 561 Score = 570 bits (1470), Expect = e-160, Method: Composition-based stats. Identities = 193/586 (32%), Positives = 300/586 (51%), Gaps = 36/586 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 S L++ L + + + +D +HG + N A++ S+ G P +AE Sbjct: 5 VSELLQSALATLQSDGTLPADQSFTPQVGNTKDKSHGDYACNIALVASKAAGCPPRKLAE 64 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 +VA + + V+ V IAG GFIN ++S + I+++I+ ++GRN G G +V +E Sbjct: 65 ALVAALPENSAVEKVEIAGPGFINFFMSTASAFGIVNTILDEAQQFGRNNSGNGERVQVE 124 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+HVGH R A +GD L L+ +GY+VTRE+Y NDAGAQIN LALSV R Sbjct: 125 FVSANPTGPLHVGHGRGAAIGDCLCRLLEANGYDVTREFYYNDAGAQINNLALSVQSR-V 183 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGK-----ELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 + L D PE Y G Y+ V E E+ + + +++++V + Sbjct: 184 KGLTPEDESWPEDGYRGDYIVDVANAYLAGETVVADDREVTAKADPEDRDAIREFAVAYL 243 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 + DLKA +Q D++ E + + + ++ L GY YE Sbjct: 244 RREQDLDLKAFGVQFDVYFLESSLY--EDGKVEATVERLKANGYTYE------------- 288 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 + ++T GDD DR + K DG YTYF D+AY K++RGF +I G+DH Sbjct: 289 ---QDGAMWLKTTEFGDDKDRVMRKKDGGYTYFLPDVAYHLDKWQRGFTTVINEQGADHH 345 Query: 362 GYVKRLEAVAAAVSEK--KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 V R+ A A+ + + +L ++V + R G +K+SKRAG ++T+R ++DEVG Sbjct: 346 STVTRVRAGLQALKADIPQGWPDYVLHQMVMVTRSGQEVKISKRAGSYVTVRDLIDEVGR 405 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ RF + R+ L FD + Q+ ENPV+Y+QYA+AR S+ R+ + Sbjct: 406 DATRFFLAARRVDSQLTFDIDLARSQTNENPVYYIQYAHARICSVLRKLAAEGVQRGMN- 464 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 V E +L LA+YP +I N+ +EP+ L YL +LA FH +++ Sbjct: 465 --ECVGELSLLTLDEEKELANQLAKYPELIANSAAQREPHHLTHYLRELAGQFHTYYNAH 522 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V + L R+ L AV +I +GL+++GV +P EM Sbjct: 523 K-------VLIEDTALRDARVSLYLAVRQVIANGLDLLGVSAPEEM 561 >gi|148264350|ref|YP_001231056.1| arginyl-tRNA synthetase [Geobacter uraniireducens Rf4] gi|189083535|sp|A5G3W5|SYR_GEOUR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|146397850|gb|ABQ26483.1| arginyl-tRNA synthetase [Geobacter uraniireducens Rf4] Length = 561 Score = 570 bits (1470), Expect = e-160, Method: Composition-based stats. Identities = 193/587 (32%), Positives = 304/587 (51%), Gaps = 38/587 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + L + + IVIE+P HG +TN AM+L++ P +AE Sbjct: 5 LRDLITKELASCFADGSLSSGVFPSIVIEKPAHAEHGDFATNVAMLLAKAEKKAPRVVAE 64 Query: 67 LIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 ++V+R++ D + +AG GFIN Y+ R+ L +I + +YG++ IG+G K+ + Sbjct: 65 ILVSRLQESADICSKLEVAGPGFINFYVKDEAWRQTLIAIDRACADYGKSRIGEGKKIQV 124 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+H+GH R A +GDT+ L+A G++VTRE+Y NDAG QI LALSV R Sbjct: 125 EFVSANPTGPLHIGHGRGAAIGDTICRLLAAIGWDVTREFYYNDAGQQIANLALSVQARC 184 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVG-----KELADKYSSELLNFPEEKWLPIVKDYSVQA 240 + +D P Y G Y++ V +E + + + + L ++ ++V Sbjct: 185 L-GIEPDDPRWPLDGYQGDYIRDVARSYLGQETVEADDQHVTAAGDPQDLDAIRRFAVAY 243 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 + + DL A ++ D++ E + + ++ L G+ YE Sbjct: 244 LRREQDQDLTAFDVHFDVYSLESALYA--EGRVEAVVQRLIDSGHTYE------------ 289 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 L R+T GDD DR + K+DG YTYF D+AY K+ERGF +I G+DH Sbjct: 290 ----QDGALWLRTTTFGDDKDRVMRKADGGYTYFVPDVAYHLSKWERGFTRVINEQGADH 345 Query: 361 SGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 + R+ A A+ +L ++V + R G +K+SKRAG ++TLR ++DEVG Sbjct: 346 HSTITRVRAGLQALNAGIPVGWPEYVLHQMVTVMRGGEEVKISKRAGSYVTLRDLIDEVG 405 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ RF + RK L FD K+Q+ +NPV+YVQYA+AR SIF A + F Sbjct: 406 RDATRFFFVMRKPDSQLVFDIDLAKQQTLDNPVYYVQYAHARICSIFENALERG----FV 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L +P E E+ +I LA +P ++E + + EP+++ +YL +LA FH ++ Sbjct: 462 LPAAESVPLERLVTLEEMTIIKTLASFPEILEGSALNFEPHRVTYYLQELAGQFHSFYNR 521 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R V + +LT RL L+ VA + + L ++G+ +P +M Sbjct: 522 NR-------VITEDAELTAARLFLLKCVALTLKNALTVLGISAPEKM 561 >gi|241889465|ref|ZP_04776765.1| arginyl-tRNA synthetase [Gemella haemolysans ATCC 10379] gi|241863861|gb|EER68243.1| arginyl-tRNA synthetase [Gemella haemolysans ATCC 10379] Length = 545 Score = 570 bits (1470), Expect = e-160, Method: Composition-based stats. Identities = 216/581 (37%), Positives = 334/581 (57%), Gaps = 39/581 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 +++ ++ K++++ I +E P++ +G S+N AM L+R L +P IAE Sbjct: 2 VKNKIVELIQNSLAKLEIDGV---DIHVETPKNTDNGDFSSNVAMQLTRVLRKNPRVIAE 58 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 I++ I+ D V+ + IAG GFIN ++ S L ++ I+ +YG N IG+G KV +E Sbjct: 59 EIISNIEEDEAVEKIEIAGPGFINFFVKKSSLGSVVGKILEDDFKYGENNIGQGRKVLLE 118 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 +VSANPTG +HVGH R A D+LA +M SGY+++REYYINDAG QIN L +S RY+ Sbjct: 119 YVSANPTGTLHVGHARNAAYSDSLARIMKKSGYDLSREYYINDAGNQINNLVISAITRYK 178 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 QAL D+++PE Y G +K +G++L D++ LL E +++Y+V M+ I+ Sbjct: 179 QAL-GMDAEMPEDAYHGEDIKVLGQKLKDEFGESLLE--REDLNEFIREYAVAYEMENIK 235 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 DL +++D+F SE + + + +++L QG+VYE Sbjct: 236 KDLGDFGLEYDVFFSEKSLY--ENGLVDKALESLREQGFVYE----------------KD 277 Query: 307 KQLLFRSTMVG--DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 L +T +G DD DR L+K+DGS TY +D+AY K K +RGFD ++ V+G+DH GYV Sbjct: 278 GALWLETTALGTGDDKDRVLIKADGSLTYLTSDIAYHKNKLDRGFDLLLDVLGADHHGYV 337 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 RL+A A+ K Q+ L+ ++V+L +G +KMSKR G ITLR ++DEVG+D+ R+ Sbjct: 338 ARLKASVVAMGYKADQLEALIMQMVQLLNNGEVVKMSKRTGKAITLRDLIDEVGADAARY 397 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 ++ R LDFDF KEQS +NP++YVQYA+AR SI RQA + + Sbjct: 398 FLVMRSADSHLDFDFAVAKEQSSDNPLYYVQYAHARICSILRQAAEQAE------YDVKN 451 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 E D + L+ +LA YP ++ A EP+++ YL LAS FH +++ + Sbjct: 452 CDYELLTDEYSVDLLKNLAYYPEIVAQAAKNYEPHRICNYLQSLASSFHKFYNNNK---- 507 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V N++ T L L+ AV + + L++IGV +P +M Sbjct: 508 ---VITENKEQTQSYLALITAVKITLRNALDLIGVSAPEKM 545 >gi|167757354|ref|ZP_02429481.1| hypothetical protein CLORAM_02904 [Clostridium ramosum DSM 1402] gi|167703529|gb|EDS18108.1| hypothetical protein CLORAM_02904 [Clostridium ramosum DSM 1402] Length = 554 Score = 570 bits (1469), Expect = e-160, Method: Composition-based stats. Identities = 202/587 (34%), Positives = 329/587 (56%), Gaps = 35/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCK-IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + LK LK+ VE+ + I IE P+D +HG STN AM L++ L Sbjct: 1 MMAINKIEATLKGALKQAIIACGFVEEYDQESITIEIPKDKSHGDYSTNLAMQLTKLLKR 60 Query: 60 DPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +P IAE I+ + K + +++ V IAG GFINL+L+ + I+ ++ YG G Sbjct: 61 NPRQIAEAIIEALDKENANIEKVEIAGPGFINLFLAKDAMTSIIKEVLEEKEAYGTTTYG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 +GTK N+EFVSANPTG +H+GH + A VGD++ +M+ +GY+VTREYYINDAG QI+ LA Sbjct: 121 QGTKYNVEFVSANPTGDLHLGHAKGAAVGDSICRIMSAAGYDVTREYYINDAGNQIHNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LS++ RY+QA + D +PE Y G + + ++ + + L E K + ++ Sbjct: 181 LSLYARYKQA-FGQDVTMPEDGYHGKDIIDIATKIKEIDGDKYLEMDEGKAIAFFRNKGT 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + ++ I+D L + D++ SE + D + I+ L GY YE Sbjct: 240 EYELQKIKDILNEFRVSFDVWFSETSLYEND--RVVPTIEKLKAAGYTYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + L F+ST GDD DR L+KSDGSYTY D+AY K +RG++ ++ ++G+ Sbjct: 288 ------EEGALWFKSTEFGDDKDRVLIKSDGSYTYLTPDIAYHLNKLDRGYEYLVDLLGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ Q+N+ + ++VR+ +G P+KMSKR G+ +T++ +++E+G Sbjct: 342 DHHGYINRMKAAIQALGYNADQLNIDIIQMVRMMNNGEPVKMSKRTGNAVTIKDLIEEIG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ + + + DFD K +S ENPV+Y QYA+AR SI +A+ ++D+ Sbjct: 402 VDATRYFFVSKAANTPFDFDIGLAKSKSNENPVYYAQYAHARMCSI--KAQAAKANIDYS 459 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + E++L+ H+ E+ VI ++ I + P+K+ Y+ LA +FH ++ Sbjct: 460 D------KYDLLVNPKEIELVKHINEFRNVIIDSAINRTPHKITNYVQRLAQLFHSFYNE 513 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +N +L+ RL LV A + + LN+IGV +P +M Sbjct: 514 CY------VIDEDNLELSGQRLALVEATRITMANALNLIGVSAPEKM 554 >gi|269216290|ref|ZP_06160144.1| arginine--tRNA ligase [Slackia exigua ATCC 700122] gi|269130549|gb|EEZ61627.1| arginine--tRNA ligase [Slackia exigua ATCC 700122] Length = 601 Score = 570 bits (1469), Expect = e-160, Method: Composition-based stats. Identities = 194/597 (32%), Positives = 311/597 (52%), Gaps = 36/597 (6%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M D +++ L ++ + + I++ERPRD HG ST A+ ++ + Sbjct: 29 MQPREDLGKLVQSALSASIASGAIQLEEVPEILLERPRDVGHGDWSTPVALRCAKAAHKN 88 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P IA+ IV + V+ V IAG GFIN YL L+ +++ + G +YG+ I +G Sbjct: 89 PREIAQTIVDALPEADFVEQVEIAGPGFINFYLKDGALQNVIADVRAQGADYGKGEIPEG 148 Query: 121 -TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 KV IE++S+NPTGPMHVGH R A +G +A LM +GYEV E+YIND G Q++ Sbjct: 149 MRKVLIEYISSNPTGPMHVGHGRWAALGSAMAKLMQHAGYEVDEEFYINDHGVQMDKFGQ 208 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ RY L +++++PEG Y G Y+ + + L ++ +N E + + +++ Sbjct: 209 SIVARYLTQL-GHETEVPEGGYNGGYVNDIARALIERDGDRWVNADEHERMVEFREFGYA 267 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFH-----RGDPSPIRDIIDNLARQGYVYEGILPPP 294 A+++ IR + SE + + SP+ + L G VY+ Sbjct: 268 ALLENIRKVCDEFGTVFQYWQSERELYVPNEKWDGMSPVDYCLSKLRENGDVYD------ 321 Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354 + FRS+ GD+ DR ++KSDG YTYFA+D+ Y K RG+D +I Sbjct: 322 ----------KDGAVWFRSSKYGDEKDRVVIKSDGEYTYFASDVGYHYIKKLRGYDKLID 371 Query: 355 VMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414 + G+DH GY+ R+ AV AA+ + V L +LV L+R G P++MSKR G+ IT ++ Sbjct: 372 IWGADHHGYIPRVAAVLAAMGY-PGALEVPLGQLVNLFRGGKPVRMSKRTGEMITFEELI 430 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 +EVG D+ R+ ML R + +DFD + K+Q NPV+YVQYA+AR S+ R A + Sbjct: 431 EEVGVDATRWKMLERSTDQPIDFDIEEAKKQDASNPVYYVQYAHARICSLLRNAAGHSGE 490 Query: 475 --LDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 LD IP + + + SEL L+ ++E+ ++ A + P++L Y +L Sbjct: 491 DNLDMSAVASECIPADVDLSLLTEESELALMRKMSEFGDLVALAARDRAPFRLTHYAQEL 550 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A +FH +++ ++A + L RL L A ++ L I+G+ +P M Sbjct: 551 AGMFHQFYTNC------PVLKAEDESLKQARLALADATRIVLEIALGIMGISAPQRM 601 >gi|209542625|ref|YP_002274854.1| arginyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] gi|209530302|gb|ACI50239.1| arginyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5] Length = 597 Score = 570 bits (1469), Expect = e-160, Method: Composition-based stats. Identities = 257/597 (43%), Positives = 360/597 (60%), Gaps = 19/597 (3%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 LF + S +++ L+ I + ++ R+ + RD AHG ++TNAA++ ++ P Sbjct: 5 LFVRYLSHVRDALRRIVP--DLPDEVAARVELTPTRDPAHGDMATNAALLAAKIARRRPA 62 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 IA + A + P V AG GF+N+ L + LR I+ +++ +G YG +G+G + Sbjct: 63 EIAADLAAALAGVPGVAKAEPAGPGFVNVTLDAAVLRSIVPAVLGAGESYGDAALGQGVR 122 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VN+E+VSANPTGPMHVGHCR AVVGD LA+L+A +GY VT+EYYINDAGAQ+ LA + + Sbjct: 123 VNVEYVSANPTGPMHVGHCRGAVVGDALANLLAKAGYGVTKEYYINDAGAQVIALAWATY 182 Query: 183 WRYQQALYN--NDSDLPEG-----YYPGVYLKHVGKELADKYSSELLN-----FPEEKWL 230 WRY Q + + Y G YL VG+ LA+ + + L E WL Sbjct: 183 WRYLQVIGTTMGQEEFAALVPGGIQYGGDYLVPVGRALAEAHGTALAEPGAQPAAPEHWL 242 Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290 P VK + V MM +IR DL AL ++HD+F SE I L QG +YEG+ Sbjct: 243 PTVKSFVVAQMMAMIRQDLDALGVRHDVFTSEAKILA--DGITDRAIARLDAQGLLYEGV 300 Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350 L PPK K + + R Q LFRST GDDVDRPL KSDGS TYFA D+ Y K RG D Sbjct: 301 LEPPKGKLPEDWEA-RPQTLFRSTAFGDDVDRPLRKSDGSNTYFANDIGYHDDKIRRGAD 359 Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEK--KAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 +I V G+DH GYV R++A A+ + +VLLC++VR+ RDG P++MSKRAG F+ Sbjct: 360 LLIDVWGADHGGYVTRMKAAVKALGKDGGTVDFDVLLCQIVRIVRDGQPVRMSKRAGTFV 419 Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 TLR ++DEVG D+VRF ML RK ++FD +V Q+++NPVFYVQYA+ARCRS+ R A Sbjct: 420 TLRDLIDEVGRDAVRFTMLTRKADAQMEFDLDQVVAQTRDNPVFYVQYAHARCRSVLRAA 479 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 +++ D + +EL L+ +A++PR +E A A EP+++AFYL +L Sbjct: 480 QEMLGAQDVAPATLAQAALDGIESDAELALLRRIAQWPRTVEGAAQAHEPHRIAFYLGEL 539 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A FH W+ GR++ LRF+Q ++ T +L LV A A++I SGL ++GV EM Sbjct: 540 AGDFHTLWNRGRDDATLRFLQEDDLAATRAKLALVEATATVIRSGLAVLGVTPVEEM 596 >gi|294102407|ref|YP_003554265.1| arginyl-tRNA synthetase [Aminobacterium colombiense DSM 12261] gi|293617387|gb|ADE57541.1| arginyl-tRNA synthetase [Aminobacterium colombiense DSM 12261] Length = 558 Score = 570 bits (1469), Expect = e-160, Method: Composition-based stats. Identities = 203/587 (34%), Positives = 322/587 (54%), Gaps = 34/587 (5%) Query: 4 FADFSSRLKNYLKEIDCKIKVEKKI----LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 AD L+ L E + EK + + IE+P++ HG +TNAAM L+R Sbjct: 1 MADVLRTLRQLLDEAVLSMAEEKNVAIDDIPEFAIEKPKNEGHGDWATNAAMQLARIFHD 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +AE IV+R+ +V IAG GFIN LS ++ +++ I+ +YGR IG Sbjct: 61 NPRKLAEQIVSRLADCDYFTAVEIAGPGFINFRLSKKWMGEVVKDIITLDDDYGRQNIGG 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KV +EFVSANPTGP+HVGH R A VGD +A ++ F+G++V +EYYINDAG Q+ L Sbjct: 121 GEKVQVEFVSANPTGPLHVGHGRGAAVGDIIARILDFTGWQVEKEYYINDAGLQMEILGR 180 Query: 180 SVFWRYQQALY-NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 S RY + L + PE Y G Y+ + +E+ D+ L+ P E+ L + Y+ Sbjct: 181 STQSRYFKLLNCPERAPFPEDAYKGEYIYDLAREIIDQEGDRFLSLPLEESLGFFQTYAA 240 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 +++ I+ DL + +D++ SE + D + + ++ L + GY YE Sbjct: 241 GRILEGIKKDLADFGVAYDVWFSEKSLY--DRNLVPQAMEMLNKHGYAYE---------- 288 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + L FR+T GD+ DR L++++G TYFA+D+ Y K+ RGF +I V G+ Sbjct: 289 ------EEGALWFRATAFGDEKDRVLIRNNGVPTYFASDITYHMEKFSRGFQRVIDVWGA 342 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GYV R++A A+ +++ + V+L + V L R G + MS R+G F+TLR V+DEVG Sbjct: 343 DHHGYVPRMKAGVEALGKERGSLEVVLIQFVNLLRGGEQVAMSTRSGQFVTLRDVMDEVG 402 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ + R++ LDFD K+ S ENPV+YVQYA+AR S+ ++A++ + Sbjct: 403 VDATRYFFVMRRSDSHLDFDLELAKQSSNENPVYYVQYAHARICSVLKEAENRHIPMPG- 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 E E +L+ L+ +P+ ++ A + + P+ + + YDLA+ FH ++ Sbjct: 462 ---LAGFNPELLVSDEEKKLVNRLSLFPQEVKRAALDRAPHVIVSFAYDLAADFHSFYNA 518 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R + + + MRL LV A S+++ L ++GV +P M Sbjct: 519 NR-------ILGERQDIMDMRLLLVQASKSVLSRSLKLLGVSAPERM 558 >gi|323142043|ref|ZP_08076891.1| arginine--tRNA ligase [Phascolarctobacterium sp. YIT 12067] gi|322413430|gb|EFY04301.1| arginine--tRNA ligase [Phascolarctobacterium sp. YIT 12067] Length = 574 Score = 569 bits (1468), Expect = e-160, Method: Composition-based stats. Identities = 201/604 (33%), Positives = 307/604 (50%), Gaps = 49/604 (8%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + ++ +K+ ++ ++ L +++E P G +TN AM +R L Sbjct: 1 MDIKDLLAAAIKDAAQKAIDNGTLKPGTLPEVMLEVPPQKEFGDFATNFAMQSARSLHCA 60 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P IA+ +V + VD + IAG GFIN YL ++ +L+ I+ +G YG Sbjct: 61 PRQIAQAVVDNLDC-ASVDKMEIAGPGFINFYLKQNWTADLLAGILAAGENYGNLPANGL 119 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +V +E+VSANPTGP+HVGH R A VG + +L+ +GY+V EYYINDAG Q+N LA S Sbjct: 120 GRVQVEYVSANPTGPLHVGHARGAAVGSAMVNLLRAAGYDVESEYYINDAGNQMNNLANS 179 Query: 181 VFWRYQQALYNND-------------------SDLPEGYYPGVYLKHVGKELADKYSSEL 221 V RY Q L + PE Y G + + + Y E Sbjct: 180 VNARYLQLLKLEEMGGVPADLTVKQLDEMPTGIPFPENGYHGYDIIETAQRIIRIYGKEF 239 Query: 222 LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281 + E++ L + + + + +++DL+A + D++ SE H D IR+ L Sbjct: 240 VALEEKERLAKFLEIAYKEKLAGLKEDLEAFGVTFDVWFSEQSLH--DADKIREACKFLE 297 Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341 +G VYE F ST GDD DR +++ +G TYFAAD+AY Sbjct: 298 EKGCVYE----------------KDGAKWFNSTAYGDDKDRVVIRDNGVSTYFAADIAYH 341 Query: 342 KCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401 + K+ERGFD +I + G+DH GY+ R++A A+ ++ VLL ++VRLYR+G +K+S Sbjct: 342 RNKFERGFDRIINLWGADHHGYIARVKAAVNALGFDADKLEVLLLQMVRLYRNGDIVKLS 401 Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461 KR G+ ITLR ++DEVG D+ R+ R LDFD E+S ENPV+Y+QYA+AR Sbjct: 402 KRTGETITLRELMDEVGVDAARYFFCMRSLDSQLDFDMTLATEKSNENPVYYIQYAHARI 461 Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 SI RQ + + + + ++ EL L+ L EYP ++ A + + + Sbjct: 462 CSIARQLAEAGIEA----VALDELKLDTLQAPEELALVKKLGEYPELLARAARERAVHHV 517 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 A Y Y+LA++FH ++ R + + L R+ LV AV I L I+GV + Sbjct: 518 ATYTYELATLFHSFYNQCR-------ILGVDTDLQQARIALVKAVGHTIRHALGILGVSA 570 Query: 582 PNEM 585 P M Sbjct: 571 PERM 574 >gi|224541964|ref|ZP_03682503.1| hypothetical protein CATMIT_01137 [Catenibacterium mitsuokai DSM 15897] gi|224525104|gb|EEF94209.1| hypothetical protein CATMIT_01137 [Catenibacterium mitsuokai DSM 15897] Length = 568 Score = 569 bits (1468), Expect = e-160, Method: Composition-based stats. Identities = 203/584 (34%), Positives = 317/584 (54%), Gaps = 39/584 (6%) Query: 8 SSRLKNYLKEIDCK-----IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 ++L+N LK + + + I+IE P+D HG STN AM L+R L +P Sbjct: 18 ENKLENSLKIAIGQSVNKCFEAVDITPENIMIEIPKDSTHGDYSTNIAMQLTRTLHKNPR 77 Query: 63 TIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 IA IV + + + V IAG GFIN ++ L +++ ++ YG+ G+G Sbjct: 78 EIATAIVDSLDQEAAHVEKVEIAGPGFINFFMKNDALTSVIAEVLSEKDNYGQTHFGEGK 137 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 K N+EFVSANPTG +H+GH + A VGD++ +M +GY+VTREYYINDAG QI LALS+ Sbjct: 138 KYNVEFVSANPTGDLHLGHAKGAAVGDSICRIMTKAGYDVTREYYINDAGKQITNLALSL 197 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 + RY AL++ + +PE Y G + + K + +K L EE+ + + + Sbjct: 198 YSRYL-ALFDIERPIPEDGYMGQDVIDIAKSIKEKEGDALTQLTEEEAIAYFRKVGTEHE 256 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 ++ I+D LK + D++ SE + G+ I I+ L +GY YE Sbjct: 257 LQKIKDILKEFRVSFDVWFSETSLYEGN--KIEPAINKLKEKGYTYE------------- 301 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 L FR+T GDD DR L+K+DGSYTYF D+AY K RG+D ++ ++G+DH Sbjct: 302 ---QDGALWFRTTDFGDDKDRVLIKTDGSYTYFTPDIAYHLSKLNRGYDYLVDLLGADHH 358 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 GY+ R++A A+ Q+N+ + ++VR+ +G +KMSKR G+ +T+R ++D++G D+ Sbjct: 359 GYINRMKAAIQALGYNADQLNIDILQMVRMVENGEVVKMSKRTGNAVTIRDLIDDIGVDA 418 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 R+ + + + DFD K QS ENPV+Y QYA+AR SI R A + + Sbjct: 419 TRYFFVAKAANTPFDFDLGLAKSQSNENPVYYAQYAHARMCSIMRSAAEKNIE------- 471 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 E + E++L+ H+ E+ I +A + P+K+A Y+ LA +FH + Sbjct: 472 -PADHFELINNPKEIELLKHINEFKNTINDAARTRAPHKIANYIQRLAQLFHSFYGDCH- 529 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + N++L+ RL LV A I + LN+IGV +P +M Sbjct: 530 -----VIDEENKELSSQRLALVEATRITIANALNLIGVHAPEKM 568 >gi|157964131|ref|YP_001498955.1| arginyl-tRNA synthetase [Rickettsia massiliae MTU5] gi|157843907|gb|ABV84408.1| Arginyl-tRNA synthetase [Rickettsia massiliae MTU5] Length = 578 Score = 569 bits (1468), Expect = e-160, Method: Composition-based stats. Identities = 247/585 (42%), Positives = 364/585 (62%), Gaps = 9/585 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +F ++LK + ++ ++I + IE P+D +G LS+N AMI++ + Sbjct: 3 MNIF----NQLKQDIIVASRQLYNNQEIANTATIETPKDSFNGDLSSNIAMIIAAKESIS 58 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A + P + S+ IAG GFIN + + + I+ ++ I K Sbjct: 59 PREVALKFKEVLITLPYIASIEIAGPGFINFTIKADSWQASIKDILQHEEKFFEIDIDKS 118 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +NIE+VSANPTGPMH+GH R AV GD LA ++ GY VT+EYY+NDAG+QIN L + Sbjct: 119 RNINIEYVSANPTGPMHIGHARGAVYGDVLARILQKVGYSVTKEYYVNDAGSQINDLVST 178 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V RY++AL +P G YPG YL +G+ LA +Y ++LL + + I+K ++V+ Sbjct: 179 VLLRYKEAL-GEQMTIPAGLYPGEYLIPLGQILAKEYGNKLLTMNDAERFKIIKSFAVEK 237 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 M+ + R DL L I+HDIF SE H D I + L R G +YEG LP PK K + Sbjct: 238 MLDLNRKDLADLGIKHDIFFSEQSLH--DKGEIEATVKLLERMGLIYEGTLPAPKGKIHE 295 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + D +R Q LF+ST GD DRP+ K+DGS++YFA+DLAY K K ERG +++IYV+G+DH Sbjct: 296 EWD-NRVQKLFKSTKYGDSQDRPIAKADGSWSYFASDLAYAKDKIERGANHLIYVLGADH 354 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 SGYVKR+EA+ A+ +++ +++V +C+LV +G+P+KMSKR G F +++ V EVG D Sbjct: 355 SGYVKRIEAIVKALGKEQVKVDVKICQLVNFVENGVPVKMSKRLGSFASVQDVNHEVGKD 414 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +RFMML R+N + LDFD KVKEQS+ENP+FYVQYA+ R SI +A+++ P+ ++ F Sbjct: 415 IIRFMMLTRQNDKPLDFDLVKVKEQSRENPIFYVQYAHVRTISILSKARELMPE-SYNHF 473 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 E+++I LA + + +E A EP+++AFYL +LAS H W+ G+ Sbjct: 474 EAGKYDLSLLSSEEEIEIIKLLASWTKTLEAAAKYFEPHRIAFYLINLASKVHSMWNFGK 533 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 EN RFV +N++LT+ RL L A+ +I SGL +IGVE N+M Sbjct: 534 ENSDYRFVIESNKELTLARLALASAIRKVIASGLEVIGVEPMNKM 578 >gi|227487946|ref|ZP_03918262.1| arginyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867] gi|227092037|gb|EEI27349.1| arginyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51867] Length = 549 Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats. Identities = 188/582 (32%), Positives = 302/582 (51%), Gaps = 37/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 AD ++ +K + I + + + +ERPR+ HG +TN A+ +++ G++P + Sbjct: 4 ADLATLVKKTAESILPD---PSVLPEEVTVERPRNPEHGDYATNLALQVAKKAGMNPREL 60 Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 + + + DP ++S IAG GFINL L+ + +I++ ++ G ++G + + GTK+N Sbjct: 61 GQKLADALSEDPAIESAEIAGPGFINLRLNSAAQGEIVARVLELGEKFGFSDVLSGTKIN 120 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGP+H+G R A VGD+L ++ FSG EVTREYY ND G QI+ A S+ Sbjct: 121 LEFVSANPTGPIHLGGTRWAAVGDSLGRVLEFSGAEVTREYYFNDHGGQIDRFARSLVAA 180 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 + PE Y G Y+K + + + + L +E+ + + V+ M Sbjct: 181 AK------GEPTPEDGYGGDYIKDIAAAVVKEVPTALKG-SDEEVQETFRAHGVEMMFDH 233 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 I+ L D+F E+ + + ++ L G +YE Sbjct: 234 IKKSLAEFGTHFDVFFHENSLF--ESGAVEKAVEKLKSSGELYEA--------------- 276 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 +ST GDD DR ++KSDG+ Y A D+AY K++RG D IY++G+DH GY+ Sbjct: 277 -DGAWWLKSTDYGDDKDRVVIKSDGNAAYIAGDIAYVANKFDRGHDLAIYMLGADHHGYI 335 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 RL+A AAA+ ++ V++ ++V L RDG +KMSKRAG ITL +V+ +G D+ R+ Sbjct: 336 ARLKAAAAALGYDADRVEVMIGQMVNLLRDGKAVKMSKRAGTVITLDDLVEAIGIDAARY 395 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRN 483 ++ LD D QS +NPV+YVQY +AR S+ R+A+ I + D D + Sbjct: 396 SLIRSSVDSTLDIDLDLWAAQSSDNPVYYVQYGHARLCSLARKAEGIGNGVTDTDSADLS 455 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ E E D LI L E+P V+ +A +EP+++A Y LA+ FH + P Sbjct: 456 LLTHEREGD-----LIRTLGEFPSVVASAAELREPHRIARYAEQLAATFHRFYDTCHVLP 510 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + R L A + + L ++GV +P M Sbjct: 511 GQ---DEEVEPIHVARFALAMATRQTLANALGLVGVTAPERM 549 >gi|242372836|ref|ZP_04818410.1| arginyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1] gi|242349455|gb|EES41056.1| arginyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1] Length = 553 Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats. Identities = 198/586 (33%), Positives = 313/586 (53%), Gaps = 34/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L ++ K ++ + I I IE P+D +G S+N AM+L++ + Sbjct: 1 MNIIDQVKQTLIEEIEASIKKARLAEDI-PEIKIEIPKDTKNGDYSSNIAMVLTKIAKRN 59 Query: 61 PLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ IV + V IAG GFIN YL YL +++ + G ++G K Sbjct: 60 PREIAQAIVDHLDTSKAHVKEVDIAGPGFINFYLDNHYLTEVIPEAIHKGDKFGYADEPK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 + +E+VSANPTG +H+GH R A VGD+LA+++ +GY VTREYYINDAG QI LA Sbjct: 120 NKNILLEYVSANPTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ RY +AL + ++PE Y G + +GK+LADK+ E+ ++ +E+ L + V Sbjct: 180 SIETRYFEALGDTSHEMPEDGYNGKDIIEIGKDLADKH-PEIKDYSDEERLKTFRQLGVD 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M ++ DL A N+ D + SE + + I + + + GY YE Sbjct: 239 YEMDKLKKDLAAFNVHFDNWFSETSLY--ENGAIDNTLAKMKELGYTYEA---------- 286 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 R++ DD DR L+K DG+YTYF D AY K RG D +I +MG+D Sbjct: 287 ------DGATWLRTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A ++ + + ++VRL ++G +KMSKR G+ ITLR ++DEVG Sbjct: 341 HHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGI 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R DFD KEQS++NP++Y QYA+AR SI +QAK+ ++ D Sbjct: 401 DAARYFLTMRSPDSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEQGVEITTDA 460 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + ++L+ +AE+ IE+A + P++L Y+ DLAS FH ++ Sbjct: 461 DFTTI------TNEKAIELLKKVAEFETTIESAAEHRAPHRLTNYIQDLASAFHKFYNAE 514 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ + T + ++ AV +++ L ++GV +P M Sbjct: 515 K-------VLTDDAEKTKAHVAMIEAVRITLHNALTLVGVTAPESM 553 >gi|117924014|ref|YP_864631.1| arginyl-tRNA synthetase [Magnetococcus sp. MC-1] gi|238685476|sp|A0L5I2|SYR_MAGSM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|117607770|gb|ABK43225.1| arginyl-tRNA synthetase [Magnetococcus sp. MC-1] Length = 575 Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats. Identities = 222/584 (38%), Positives = 342/584 (58%), Gaps = 18/584 (3%) Query: 7 FSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 +++ + + + L I +ERP+D +HG S N AM+L++ + P +A Sbjct: 5 IEELMEHAQNTLLAEGVIPADAKLGGIKVERPKDKSHGDFSINTAMVLAKQARMKPRDLA 64 Query: 66 ELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 + +V + V IAG GFIN +++P LR +++ ++ G YG+ +G G KV Sbjct: 65 QRLVDALPSGQGVVSRCEIAGPGFINFFVTPERLRGVVADVLQRGGSYGQGNVGAGQKVL 124 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGPMHVGH R AV GD LA ++ +GY V REYY+NDAG Q+ L SV R Sbjct: 125 VEFVSANPTGPMHVGHGRGAVTGDVLARILECAGYAVQREYYLNDAGVQVQVLGRSVMLR 184 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE---EKWLPIVKDYSVQAM 241 Y+Q L+ + ++ EG YPG Y+ + + L +K + L +++ + ++++Q + Sbjct: 185 YRQ-LFGDAVEVAEGCYPGDYVVDIARALKEKDQDKWLEVARAEPDEYPREMLEFAMQQV 243 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 + I+ DL LNI+ D + SE H I ++ L+++G +YEG+L PPK K ++ Sbjct: 244 LTWIKADLARLNIRFDHWFSEFSLH--SEGRIEHALEVLSQKGCLYEGVLEPPKGKKSEA 301 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 R QLLF++T GD+VDR L KSDGSYTYFAAD+AY K ERGF+ ++ + G+DH Sbjct: 302 W-ASRPQLLFKATDFGDEVDRALRKSDGSYTYFAADVAYHLNKAERGFERLVNIWGADHG 360 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 GYV+R++A A++ K+ ++V+L ++V L R G P+KMSKRAG F+TL VV+ SD+ Sbjct: 361 GYVRRVQAALGALTGKQNLLDVVLIQMVNLTRGGEPVKMSKRAGTFVTLEEVVEATSSDA 420 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 VRF L R + LDFD ++ +NPV+YVQYA+AR SI+ +A+ L Sbjct: 421 VRFWFLSRGSGAQLDFDLDLAVAKNNDNPVYYVQYAHARICSIWDKAQHEGVALQAQ--G 478 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + + + +E LI L +P V+E A + QEP+++ +YL DLA+ FH ++ R Sbjct: 479 WSGVDLSPLGEGAEWDLIRKLDLFPDVVEGAAVHQEPHRIPYYLLDLAAAFHTFYNSHR- 537 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + RL L+ AV +I +GL ++GV+ P M Sbjct: 538 ------IMDVDAGTRDARLVLILAVKQVIANGLELLGVQQPRSM 575 >gi|223042942|ref|ZP_03612990.1| arginyl-tRNA synthetase [Staphylococcus capitis SK14] gi|222443796|gb|EEE49893.1| arginyl-tRNA synthetase [Staphylococcus capitis SK14] Length = 553 Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats. Identities = 197/586 (33%), Positives = 312/586 (53%), Gaps = 34/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L ++ K + + I I IE P+D +G S+N AM+L++ + Sbjct: 1 MNIIDQVKQTLIEEIEASIKKAGLAEDI-PEIKIEIPKDTKNGDYSSNIAMVLTKIAKRN 59 Query: 61 PLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ IV + + IAG GFIN YL YL +I+ + G ++G K Sbjct: 60 PREIAQAIVDNLDTSKAHVKEIDIAGPGFINFYLDNQYLTQIIPEAINKGDQFGYADQSK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 T + +E+VSANPTG +H+GH R A VGD+LA+++ +GY VTREYYINDAG QI LA Sbjct: 120 NTNILLEYVSANPTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ RY +AL + ++PE Y G + +GK+LA+K+ E+ ++ +E+ L + V Sbjct: 180 SIETRYFEALGDTSHEMPEDGYNGKDIIEIGKDLANKH-PEIKDYSDEERLKTFRQLGVD 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M ++ DL N+ D + SE + + I + + + GY YE Sbjct: 239 YEMDKLKRDLADFNVHFDNWFSETSLY--ENGAIDNTLAKMKELGYTYEA---------- 286 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 R++ DD DR L+K DG+YTYF D AY K RG D +I +MG+D Sbjct: 287 ------DGATWLRTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A ++ + + ++VRL ++G +KMSKR G+ ITLR ++DEVG Sbjct: 341 HHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGI 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R DFD KEQS++NP++Y QYA+AR SI RQAK+ D+ + Sbjct: 401 DAARYFLTMRSPDSHFDFDLELAKEQSQDNPIYYAQYAHARICSILRQAKEQGVDITTN- 459 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 ++ + + L+ +AE+ IE+A + P++L Y+ DLA+ FH ++ Sbjct: 460 -----ANFDTITNEKAIDLLKKVAEFETTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAE 514 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ + T + ++ AV +++ L ++GV +P M Sbjct: 515 K-------VLTDDIEKTKALVAMIEAVRITLHNALTLVGVTAPESM 553 >gi|227542588|ref|ZP_03972637.1| arginyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866] gi|227181786|gb|EEI62758.1| arginyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC 51866] Length = 549 Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats. Identities = 188/582 (32%), Positives = 302/582 (51%), Gaps = 37/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 AD ++ +K + I + + + +ERPR+ HG +TN A+ +++ G++P + Sbjct: 4 ADLATLVKKTAESILPD---PSVLPEEVTVERPRNPEHGDYATNLALQVAKKAGMNPREL 60 Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 + + + DP ++S IAG GFINL L+ + +I++ ++ G ++G + + GTK+N Sbjct: 61 GQKLADALSEDPAIESAEIAGPGFINLRLNSAAQGEIVARVLELGEKFGFSDVLSGTKIN 120 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGP+H+G R A VGD+L ++ FSG EVTREYY ND G QI+ A S+ Sbjct: 121 LEFVSANPTGPIHLGGTRWAAVGDSLGRVLEFSGAEVTREYYFNDHGGQIDRFARSLVAA 180 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 + PE Y G Y+K + + + + L +E+ + + V+ M Sbjct: 181 AK------GEPTPEDGYGGDYIKDIAAAVVQEVPTA-LEGSDEEVQETFRAHGVEMMFDH 233 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 I+ L D+F E+ + + ++ L G +YE Sbjct: 234 IKKSLAEFGTHFDVFFHENSLF--ESGAVEKAVEKLKSSGELYEA--------------- 276 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 +ST GDD DR ++KSDG+ Y A D+AY K++RG D IY++G+DH GY+ Sbjct: 277 -DGAWWLKSTDYGDDKDRVVIKSDGNAAYIAGDIAYVANKFDRGHDLAIYMLGADHHGYI 335 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 RL+A AAA+ ++ V++ ++V L RDG +KMSKRAG ITL +V+ +G D+ R+ Sbjct: 336 ARLKAAAAALGYDADRVEVMIGQMVNLLRDGKAVKMSKRAGTVITLDDLVEAIGIDAARY 395 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRN 483 ++ LD D QS +NPV+YVQY +AR S+ R+A+ I + D D + Sbjct: 396 SLIRSSVDSTLDIDLDLWAAQSSDNPVYYVQYGHARLCSLARKAEGIGNGVTDTDSADLS 455 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ E E D LI L E+P V+ +A +EP+++A Y LA+ FH + P Sbjct: 456 LLTHEREGD-----LIRTLGEFPSVVASAAELREPHRIARYAEQLAATFHRFYDTCHVLP 510 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + R L A + + L ++GV +P M Sbjct: 511 GQ---DEEVEPIHVARFALAMATRQTLANALGLVGVTAPERM 549 >gi|311693359|gb|ADP96232.1| arginyl-tRNA synthetase [marine bacterium HP15] Length = 561 Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats. Identities = 190/586 (32%), Positives = 301/586 (51%), Gaps = 36/586 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 S L++ L + + + +D +HG + N A++ S+ G P +AE Sbjct: 5 VSDLLQSALAALQADGTLPADQSFTPQVGNTKDKSHGDYACNIALVASKAAGCAPRKLAE 64 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 +V + V+ V IAG GFIN ++S + +++++I+ G +GRN G+G KV +E Sbjct: 65 ALVENLPESSAVEKVEIAGPGFINFFMSTASAFEVVNTILDEGDRFGRNNQGQGEKVQVE 124 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+HVGH R A +GD L L+ +GY+VTRE+Y NDAGAQI+ LALSV R Sbjct: 125 FVSANPTGPLHVGHGRGAAIGDCLCRLLEANGYDVTREFYYNDAGAQIDNLALSVQSR-V 183 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELAD-----KYSSELLNFPEEKWLPIVKDYSVQAM 241 + L +D P Y G Y+ V K E+ + + +++++V + Sbjct: 184 KGLTPDDESWPADGYRGDYIVDVAKAYLAGDTVTADDREVTAKADPEDRDAIREFAVAYL 243 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 + DLKA +Q D++ E + + + + L GY YE Sbjct: 244 RREQDLDLKAFGVQFDVYFLESSLY--EDGKVEATVKRLQENGYTYE------------- 288 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 + ++T GDD DR + K DG YTYF D+AY K++RGF +I G+DH Sbjct: 289 ---QDGAMWLKTTEFGDDKDRVMRKKDGGYTYFLPDVAYHLDKWQRGFTTVINEQGADHH 345 Query: 362 GYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 V R+ A A+ + + +L ++V + R G +K+SKRAG ++T+R ++DEVG Sbjct: 346 STVTRVRAGLQALNAGIPQGWPDYVLHQMVMVTRSGQEVKISKRAGSYVTVRDLIDEVGR 405 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ RF + R+ L FD + Q+ ENPV+YVQYA+AR S+ R+ + + + Sbjct: 406 DATRFFLAARRVDSQLTFDIDLARSQTNENPVYYVQYAHARICSVLRKLAEEGVERSRNE 465 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 ++ E L LA+YP +I N+ +EP+ L YL DLA FH +++ Sbjct: 466 CIGDLSLLTL---DEEKDLANQLAKYPELIANSAAQREPHHLTHYLRDLAGQFHTYYNAH 522 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V + + R+ L A+ +I +GL+++GV +P EM Sbjct: 523 K-------VLIEDTAVRDARVSLYLAIRQVIANGLDLLGVSAPEEM 561 >gi|157803251|ref|YP_001491800.1| arginyl-tRNA synthetase [Rickettsia canadensis str. McKiel] gi|166232834|sp|A8EXD2|SYR_RICCK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|157784514|gb|ABV73015.1| arginyl-tRNA synthetase [Rickettsia canadensis str. McKiel] Length = 576 Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats. Identities = 248/585 (42%), Positives = 365/585 (62%), Gaps = 9/585 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +F ++LK + ++ ++I + + IE +D +G LS+N AMI++ + Sbjct: 1 MNIF----NQLKQDIIAASRQLYNNQEIANIVTIETSKDNFNGDLSSNIAMIIAAKENMP 56 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P T+A + P + S+ IAG GFIN + + + +I+ ++ I K Sbjct: 57 PRTVALKFKEILITLPYIASIEIAGPGFINFTIKAESWQIAIKNILQHEGKFFEIDIDKN 116 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +NIE+VSANPTGPMH+GH R AV GD LA ++ GY VT+EYY+NDAG+QIN L + Sbjct: 117 KYINIEYVSANPTGPMHIGHARGAVYGDVLARILQKVGYNVTKEYYVNDAGSQINDLVST 176 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V RY++AL +P G YPG YL VG+ L +Y ++LL EE+ IVK+++V+ Sbjct: 177 VLLRYREAL-GEKITIPVGLYPGEYLIPVGQILVKEYGNKLLVMDEEERFKIVKNFAVEK 235 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 M+ + R DL+ L I+HD+F SE H D I +I+ L G +YEG LP PK K Sbjct: 236 MLDLNRKDLEELGIKHDLFFSEQSLH--DKGKIEEIVKLLTNMGLIYEGTLPAPKGKIHA 293 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 K D +R Q LF+ST GD DRP+ K+DGS++YFA+DLAY K K +RG +++IYV+G+DH Sbjct: 294 KWD-NRVQKLFKSTKYGDSQDRPIEKADGSWSYFASDLAYAKDKIDRGANHLIYVLGADH 352 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 SGYVKR+EA+ A+ +++ +++V +C+LV +G+P+KMSKR G+F +++ V EVG D Sbjct: 353 SGYVKRIEAIVKALGKEQIKVDVKICQLVNFIENGVPVKMSKRLGNFASVQDVNHEVGKD 412 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +RFMML R+N + LDFD KVKEQS+ENP+FYVQYA+ R SI +A ++ P+ + F Sbjct: 413 IIRFMMLTRQNDKPLDFDLVKVKEQSRENPIFYVQYAHVRTVSILSKAMELMPE-SYSSF 471 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 + E+ +I LA + + +E + EP+++A YL +LAS FH W+ G+ Sbjct: 472 EAGIYDLSLLSSEEEIDIIKLLAAWTKTLEVSAKYFEPHRIALYLINLASKFHSIWNFGK 531 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 EN RFV NN++LT RL L A+ +I SG +IGVE N+M Sbjct: 532 ENSDYRFVIENNKELTTARLALAKAIQKVIASGFEVIGVEPMNKM 576 >gi|325291383|ref|YP_004267564.1| arginyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271] gi|324966784|gb|ADY57563.1| arginyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271] Length = 561 Score = 569 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 208/590 (35%), Positives = 322/590 (54%), Gaps = 34/590 (5%) Query: 1 MYLFADFS----SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRP 56 M L+ + RLK + + ++ L VIE PR+ HG L+TN AM+L++ Sbjct: 1 MGLYEELKALIYERLKQSAERAKERGDLDFDELPAFVIEEPRERQHGDLATNLAMLLTKI 60 Query: 57 LGLDPLTIAELIVARIKIDPDVDSV-FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115 P IA +I++ + + IAG GFIN L +L K+L ++ G YG Sbjct: 61 AKKAPRDIAGVIISHLNTEGTWIKACEIAGPGFINFKLDSGWLGKVLPEVLNKGERYGHV 120 Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175 IGKG K+ +EFVSANPTG +H+G+ R A +GD+LASL++ +GYEV+RE+YINDAG QI+ Sbjct: 121 DIGKGQKIQVEFVSANPTGLLHMGNARGAALGDSLASLLSMAGYEVSREFYINDAGNQIH 180 Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235 ALS+ RY Q L D LPE Y G L +EL + L E + Sbjct: 181 HFALSLEARYLQ-LMGQDVPLPENGYHGEDLIETVRELIKLDGDKYLRTEPELRQEYLVR 239 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 Y++ ++ I++ L + +D++ SE H D I++ + + +G++YE Sbjct: 240 YALNEKIRNIKETLGKFGVHYDVWFSEQSLH--DSGSIQETMQEMMDKGFIYE------- 290 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 L +ST+ GD+ D +++S+G TYFAAD+AY K K+ERGF+ +I + Sbjct: 291 ---------KEGALWLKSTLFGDEKDEVVVRSNGVPTYFAADIAYHKNKFERGFEQVINI 341 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 G+DH G+V R++ A+ ++ ++L +LVRL +DG +KMSKR+G +ITL+ ++D Sbjct: 342 WGADHHGHVARMKGAMQALGYDPERLQIILMQLVRLIQDGEIVKMSKRSGQYITLQELMD 401 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 EVG D+ RF + R ++FD K QS +NPV+YVQYA+AR SI RQA++ Sbjct: 402 EVGRDAARFFFIMRDPDSTVEFDLDLAKSQSADNPVYYVQYAHARLCSILRQAEEQGFAH 461 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + + ++ E L+ LA+ P I A EP++LA Y+ +LA +FH Sbjct: 462 EVE---PDIKQISLLASQEECDLLKKLADLPGEIALAARMTEPHRLARYVMELAGLFHSF 518 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ R V ++ L RL L+ A+ ++ + L I+GV +P M Sbjct: 519 YNSHR-------VLVDDADLRTARLALIRAIRQVLANVLTILGVTAPERM 561 >gi|73663421|ref|YP_302202.1| arginyl-tRNA synthetase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|109895041|sp|Q49VF3|SYR_STAS1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|72495936|dbj|BAE19257.1| arginyl-tRNA synthetase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 555 Score = 569 bits (1466), Expect = e-160, Method: Composition-based stats. Identities = 198/587 (33%), Positives = 316/587 (53%), Gaps = 34/587 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + L + K + E + I IE P+D A+G STN AM+L++ Sbjct: 1 MNIIDQVKQTLIEEINHSIQKAALAEASDIPDIKIEIPKDDANGDYSTNIAMVLTKIAKR 60 Query: 60 DPLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +P IA+ IV + + V IAG GFIN YL +YL +++S + ++G Sbjct: 61 NPREIAQAIVDHLDTTAANVEKVQIAGPGFINFYLDNAYLTEVISEAIDKDEKFGSTAEQ 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G + +E+VSANPTG +H+GH R A VGDTLA+++ +GY VTREYY+NDAG QI LA Sbjct: 121 NGKNILLEYVSANPTGDLHIGHARNAAVGDTLANILTAAGYHVTREYYVNDAGNQITNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 S+ RY +AL ++ ++PEG Y G + ++GK+LA+K EL + E++ + + V Sbjct: 181 RSIEARYFEALGDDSFEMPEGGYHGKDIINIGKDLAEK-QPELKDLSEDERIKTFRKLGV 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 M+ +R DL N D + SE + + I ++++ ++ GY YE Sbjct: 240 DYEMEKLRTDLSDFNTHFDNWFSETSLY--EKGEITEVLNKMSELGYTYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 R+T DD DR L+K+DG+YTYF D+AY K +RG D +I + G+ Sbjct: 288 ------QDGATWLRTTDFKDDKDRVLIKNDGNYTYFLPDIAYHFDKIKRGNDTLINLFGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ RL+A + ++ + + ++VRL +DG +KMSKR G+ ITLR ++DEVG Sbjct: 342 DHHGYINRLKASLETFGVESDRLEIQIMQMVRLMQDGQEVKMSKRTGNAITLREIMDEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ + R DFD K++S++NPV+Y QYA+AR SI +QA + Sbjct: 402 VDAARYFLTMRSPDTHFDFDMELAKQESQDNPVYYAQYAHARICSILKQAAERG------ 455 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + P + + L+ +AE+ I++A + P+++ Y+ DLAS FH ++ Sbjct: 456 ITPSKDADYTLITNDKAIDLLKKVAEFETTIQSAAANRAPHRITNYIQDLASHFHKFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ + T + L+ AV + + L+++GV +P M Sbjct: 516 EK-------VLTDDVEKTKALIALIDAVRITLRNALSLVGVNAPETM 555 >gi|314932835|ref|ZP_07840204.1| arginine--tRNA ligase [Staphylococcus caprae C87] gi|313654516|gb|EFS18269.1| arginine--tRNA ligase [Staphylococcus caprae C87] Length = 553 Score = 568 bits (1465), Expect = e-160, Method: Composition-based stats. Identities = 197/586 (33%), Positives = 312/586 (53%), Gaps = 34/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L ++ K + + I I IE P+D +G S+N AM+L++ + Sbjct: 1 MNIIDQVKQTLIEEIEASIKKAGLAEDI-PEIKIEIPKDTKNGDYSSNIAMVLTKIAKRN 59 Query: 61 PLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ IV + + IAG GFIN YL YL +I+ + G ++G K Sbjct: 60 PREIAQAIVDNLDTSKAHVKEIDIAGPGFINFYLDNQYLTQIIPEAINKGDQFGYADQSK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 T + +E+VSANPTG +H+GH R A VGD+LA+++ +GY VTREYYINDAG QI LA Sbjct: 120 NTNILLEYVSANPTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ RY +AL + ++PE Y G + +GK+LA+K+ E+ ++ +E+ L + V Sbjct: 180 SIETRYFEALGDTSHEMPEDGYNGKDIIEIGKDLANKH-PEIKDYSDEERLKTFRQLGVD 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M ++ DL N+ D + SE + + I + + + GY YE Sbjct: 239 YEMDKLKRDLADFNVHFDNWFSETSLY--ENGAIDNTLAKMKELGYTYEA---------- 286 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 R++ DD DR L+K DG+YTYF D AY K RG D +I +MG+D Sbjct: 287 ------DGATWLRTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGDDILIDLMGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A ++ + + ++VRL ++G +KMSKR G+ ITLR ++DEVG Sbjct: 341 HHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGI 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R DFD KEQS++NP++Y QYA+AR SI RQAK+ D+ + Sbjct: 401 DAARYFLTMRSPDSHFDFDLELAKEQSQDNPIYYAQYAHARICSILRQAKEQGVDITTN- 459 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 ++ + + L+ +AE+ IE+A + P++L Y+ DLA+ FH ++ Sbjct: 460 -----ANFDTITNEKAIDLLKKVAEFETTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAE 514 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ + T + ++ AV +++ L ++GV +P M Sbjct: 515 K-------VLTDDIEKTKALVAMIEAVRITLHNALTLVGVTAPESM 553 >gi|237735571|ref|ZP_04566052.1| arginyl-tRNA synthetase [Mollicutes bacterium D7] gi|229381316|gb|EEO31407.1| arginyl-tRNA synthetase [Coprobacillus sp. D7] Length = 553 Score = 568 bits (1464), Expect = e-160, Method: Composition-based stats. Identities = 201/581 (34%), Positives = 328/581 (56%), Gaps = 35/581 (6%) Query: 7 FSSRLKNYLKEIDCK-IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 + LK LK+ VE+ + I IE P+D +HG STN AM L++ L +P IA Sbjct: 6 IEATLKGALKQAIIACGFVEEYDQESITIEIPKDKSHGDYSTNLAMQLTKLLKRNPRQIA 65 Query: 66 ELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 E I+ + K + +++ V IAG GFINL+L+ + I+ ++ YG G+GTK N Sbjct: 66 EAIIEALDKENANIEKVEIAGPGFINLFLAKDAMTSIIKEVLEEKEAYGTTTYGQGTKYN 125 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTG +H+GH + A VGD++ +M+ +GY+VTREYYINDAG QI+ LALS++ R Sbjct: 126 VEFVSANPTGDLHLGHAKGAAVGDSICRIMSAAGYDVTREYYINDAGNQIHNLALSLYAR 185 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 Y+QA + D +PE Y G + + ++ + + L E K + ++ + ++ Sbjct: 186 YKQA-FGQDVTMPEDGYHGKDIIDIATKIKEIDGDKYLEMDEGKAIAFFRNKGTEYELQK 244 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 I+D L + D++ SE + D + I+ L GY YE Sbjct: 245 IKDILNEFRVSFDVWFSETSLYEND--RVVPTIEKLKAAGYTYE---------------- 286 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 + L F+ST GDD DR L+KSDGSYTY D+AY K +RG++ ++ ++G+DH GY+ Sbjct: 287 EEGALWFKSTEFGDDKDRVLIKSDGSYTYLTPDIAYHLNKLDRGYEYLVDLLGADHHGYI 346 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 R++A A+ Q+N+ + ++VR+ +G P+KMSKR G+ +T++ +++E+G D+ R+ Sbjct: 347 NRMKAAIQALGYNADQLNIDIIQMVRMMNNGEPVKMSKRTGNAVTIKDLIEEIGVDATRY 406 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 + + + DFD K +S ENPV+Y QYA+AR SI +A+ ++D+ Sbjct: 407 FFVSKAANTPFDFDIGLAKSKSNENPVYYAQYAHARMCSI--KAQAAKANIDYSD----- 459 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 + + E++L+ H+ E+ VI ++ I + P+K+ Y+ LA +FH ++ Sbjct: 460 -KYDLLVNPKEIELVKHINEFRNVIIDSAINRTPHKITNYVQRLAQLFHSFYNECY---- 514 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +N +L+ RL LV A + + LN+IGV +P +M Sbjct: 515 --VIDEDNLELSGQRLALVEATRITMANALNLIGVSAPEKM 553 >gi|319891595|ref|YP_004148470.1| Arginyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03] gi|317161291|gb|ADV04834.1| Arginyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03] Length = 552 Score = 568 bits (1464), Expect = e-160, Method: Composition-based stats. Identities = 199/586 (33%), Positives = 315/586 (53%), Gaps = 35/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L +++ + + + I I IE P+D +G +TN AM+L++ + Sbjct: 1 MNIIDQVKQTLIQEIEKSIQQANIVESI-PEIKIEIPKDTKNGDYATNIAMVLTKLAKRN 59 Query: 61 PLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+LIV + + + IAG GFIN YL SYL ++ + ++GR K Sbjct: 60 PREIAQLIVDHLDTEAAHVKKIDIAGPGFINFYLDSSYLNAVIDQALELDTQFGRVAESK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 K+ +E+VSANPTG +H+GH R A VGDTL +++ +GY+VTREYYINDAG QI LA Sbjct: 120 NKKILVEYVSANPTGDLHIGHARNAAVGDTLCNILDAAGYDVTREYYINDAGNQITNLAK 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ RY Q L +++P Y G +K++G +LA K L++ +++ L + V Sbjct: 180 SIEARYLQHL-GQKAEMPADGYHGQDIKNIGADLAKK-QPNLMDLSDDERLKTFRQLGVD 237 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M ++ DL NI D + SE + + I+ +++ + GY YE Sbjct: 238 YEMAKLKQDLADFNIHFDNWFSETSLY--EKGEIKAVLERMKENGYTYE----------- 284 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 R+T DD DR L+K DG+YTYF D+AY K++RG DN+I + G+D Sbjct: 285 -----QDGATWLRTTDFKDDKDRVLIKKDGTYTYFLPDIAYHYDKFQRGNDNLINLFGAD 339 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A ++ + + ++VRL +DG +KMSKR G+ ITLR ++DEVG Sbjct: 340 HHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQDGEEVKMSKRTGNAITLREIMDEVGI 399 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R DFD KEQS++NPV+Y QYA+AR SI RQA+ ++ Sbjct: 400 DAARYFLTMRSADTHFDFDMALAKEQSQDNPVYYAQYAHARICSILRQAEAQGYQVEKGA 459 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + + ++L+ +AE+ +IE A A+ P+++ Y+ DLA+ FH ++ Sbjct: 460 DYQTI------TNDKAIELLKKVAEFEPMIEGAAEARAPHRVTNYIQDLAAHFHKFYNAE 513 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ T L L+ AV + + L ++GV +P +M Sbjct: 514 K-------VLTEDQAKTKAHLALIDAVRITLRNALQLVGVTAPEQM 552 >gi|330685904|gb|EGG97533.1| arginine--tRNA ligase [Staphylococcus epidermidis VCU121] Length = 553 Score = 568 bits (1464), Expect = e-159, Method: Composition-based stats. Identities = 202/586 (34%), Positives = 317/586 (54%), Gaps = 34/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L ++ K K+ I I IE P+D +G STN AM+L++ + Sbjct: 1 MNIIEQVKQTLVEEIEASIKKAKLANDI-PEIKIEIPKDVKNGDYSTNIAMVLTKIAKRN 59 Query: 61 PLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ IV + V IAG GFIN YL YL I+ + G ++G+ K Sbjct: 60 PREIAQAIVDHLDASKAHVKKVDIAGPGFINFYLDNQYLTDIIPEAIQKGDQFGKAEESK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 + +E+VSANPTG +H+GH R A VGDTLA+++ +GY VTREYYINDAG QI+ LA Sbjct: 120 NKNILLEYVSANPTGDLHIGHARNAAVGDTLANILIAAGYHVTREYYINDAGNQISNLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ R+ +AL ++ ++PE Y G + +GK+LADK+ E+ ++ +++ L + V Sbjct: 180 SIETRFFEALGDDSHEMPEDGYNGKDIVEIGKDLADKH-PEIKDYSDDERLKTFRQLGVD 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M ++ DL N D + SE + + I++++ + GY YE Sbjct: 239 YEMSKLKKDLSDFNTHFDNWFSETSLY--EKGEIKEVLAKMNELGYTYEA---------- 286 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 R++ DD DR L+K DG+YTYF D+AY K +RG D +I +MG+D Sbjct: 287 ------DGATWLRTSDFKDDKDRVLIKKDGNYTYFLPDIAYHFDKVQRGNDILIDLMGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A ++ + + ++VRL ++G +KMSKR G+ ITLR ++DEVG Sbjct: 341 HHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGV 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R DFD KEQS++NPV+Y QY +AR SI +QAK+ D+ D+ Sbjct: 401 DAARYFLTMRSPDTHFDFDMELAKEQSQDNPVYYAQYGHARICSILKQAKEQGIDISTDV 460 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + ++L+ +AE+ IE+A ++ P+++ Y+ DLAS FH ++ Sbjct: 461 DFSKI------TNEKAIELLKKVAEFEPTIESAADSRAPHRMTNYIQDLASHFHKFYNAE 514 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ + T + LV AV +N+ L ++GV +P M Sbjct: 515 K-------VLTDDIEKTKAHIALVEAVRITLNNALALVGVSAPESM 553 >gi|116748008|ref|YP_844695.1| arginyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB] gi|116697072|gb|ABK16260.1| arginyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB] Length = 559 Score = 568 bits (1464), Expect = e-159, Method: Composition-based stats. Identities = 208/555 (37%), Positives = 324/555 (58%), Gaps = 28/555 (5%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI-KIDPDVDSVFIAGKGFIN 90 I ++ P+ HG +TN A+ L+R L +P IA IV + D + V IAG GFIN Sbjct: 32 IELDIPKLPEHGDYATNVALALTRRLKRNPREIAGKIVGGLNDPDNLLQKVEIAGPGFIN 91 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + P IL+ I+ YGR +G+G +V +EFVSANPTGP+H+GH R A GD L Sbjct: 92 FFFHPRAWHGILTDILADPRNYGRLDLGEGHRVQVEFVSANPTGPLHIGHGRGAATGDAL 151 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+++ GY V REYYINDAG Q++TL S+++RYQ+AL + P+ +Y G Y+K + Sbjct: 152 ANILEACGYAVEREYYINDAGNQMDTLGRSLYFRYQEAL-GEPVEFPDAHYRGEYMKDLA 210 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 ++ L P ++ LP+ ++ +++ I+DDL + D + SE H D Sbjct: 211 RDFLRDNGDRYLRAPLDEVLPLFTRFAADRILEGIKDDLGEFGVSFDQWFSERSLHAED- 269 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 IR +++L R+G++YE + F+ST GD+ DR +++++G Sbjct: 270 -AIRRTVEDLNRRGFIYES----------------EGAVWFKSTAFGDEKDRVVIRANGV 312 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFAADLAY + KY+RG+D ++ + G+DH GYV+R+ A A+ + + ++L +LV Sbjct: 313 STYFAADLAYHRNKYDRGYDKVVDIWGADHHGYVERMLAGVEALGRNREDLRIVLVQLVN 372 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L R G P+ MS RAG+F+TLR VVDEVG D+ RF+ L R++ LDFD K ++ +NP Sbjct: 373 LLRAGKPVAMSTRAGEFVTLREVVDEVGKDAARFIFLTRRSDSPLDFDLDVAKARTNDNP 432 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 VFYVQYA+AR SIF+ A + D+ +++ ELQ+I L EYP ++ Sbjct: 433 VFYVQYAHARLCSIFQVAAERGLVCDWA-NGKDIPDLGLLTLAQELQIIKFLGEYPAILA 491 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 N + + EP+ + +YL++L S+FH +++ R V ++ +LT RL + A+ +I Sbjct: 492 NCSRSMEPHFIPYYLHELVSLFHSYYNQNR-------VIGDDPELTRARLFMAAAIREVI 544 Query: 571 NSGLNIIGVESPNEM 585 + L ++GV +P +M Sbjct: 545 RNALELLGVSAPEKM 559 >gi|288942805|ref|YP_003445045.1| arginyl-tRNA synthetase [Allochromatium vinosum DSM 180] gi|288898177|gb|ADC64013.1| arginyl-tRNA synthetase [Allochromatium vinosum DSM 180] Length = 593 Score = 568 bits (1464), Expect = e-159, Method: Composition-based stats. Identities = 193/619 (31%), Positives = 308/619 (49%), Gaps = 68/619 (10%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D + L L + + ++ I +ER +D AHG ++N AM+L++P P +A Sbjct: 4 DIKAILSAALDTLIAEGRLTLTERPEIQVERAKDSAHGDFASNLAMLLAKPARAKPRDLA 63 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 + +V + P V V IAG GFIN +L+ R ++ I+ +G +YGR+ IG G +V + Sbjct: 64 QQLVDALPASPLVARVEIAGPGFINFFLAEDAYRTLVPRILDAGPDYGRSHIGAGQRVQV 123 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+HVGH R A G +A L+ G++V REYY+NDAG Q++ L SV+ RY Sbjct: 124 EFVSANPTGPLHVGHGRGAAYGAVVADLLEAVGFDVHREYYVNDAGRQMDILGTSVWLRY 183 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE------------------- 226 + L + P Y G Y+ + L ++ E Sbjct: 184 LE-LCGEELRFPSNGYKGDYVWDIAATLHREHGDAYRVEAEQVFAGLPADAPVEGEPQDQ 242 Query: 227 --------------------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 + V + + ++ IR+DL + + + SE Sbjct: 243 TGDKEAHIDGLIAAAKRLLGDNRYRYVFELGLNTILDDIREDLAQFGVTYQEWYSERSL- 301 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 + + I+ L G+VYE L FRST GD+ DR +++ Sbjct: 302 -TESGAVNRAIERLRESGHVYE----------------QNGALWFRSTAFGDEKDRVVVR 344 Query: 327 SDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLC 386 +G TYFA+D+AY K ERGFD +I + G+DH GY+ R++A A+ + +++VLL Sbjct: 345 ENGQSTYFASDIAYHMDKLERGFDRVIDIWGADHHGYIPRVKAALQALGDDADKLDVLLV 404 Query: 387 ELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQS 446 + LYR G +MS R+G+F+TLR + EVG D+ RF + R+ + +DFD K +S Sbjct: 405 QFAILYRGGEKAQMSTRSGEFVTLRELRQEVGRDAARFFYVMRRCEQHMDFDLDLAKSES 464 Query: 447 KENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYP 506 +NPV+YVQYA+AR ++ RQA + ++ N+ E + E L+ L YP Sbjct: 465 SDNPVYYVQYAHARICAVLRQAAERGLAVEPSAGTHNL---ERLTEAHEQALLRTLGRYP 521 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 +E A + EP+++ YL +LA+ H +++ ++ L R++L+ A Sbjct: 522 ETVEQAALKAEPHQITHYLRELANDLHTYYNAHPF-------LVDDSALRDARIKLILAT 574 Query: 567 ASIINSGLNIIGVESPNEM 585 ++ +GL +IGV +P M Sbjct: 575 RQVLRNGLGLIGVSAPETM 593 >gi|296535511|ref|ZP_06897697.1| arginine--tRNA ligase [Roseomonas cervicalis ATCC 49957] gi|296264166|gb|EFH10605.1| arginine--tRNA ligase [Roseomonas cervicalis ATCC 49957] Length = 594 Score = 568 bits (1464), Expect = e-159, Method: Composition-based stats. Identities = 268/594 (45%), Positives = 372/594 (62%), Gaps = 22/594 (3%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 +FA + + L+ + + ++ L R+ +E PRD +HG +STNAAM++++ L P Sbjct: 11 MFAALRAEVLACLRRLLP--DLPEEALARVTVEPPRDASHGDMSTNAAMVVAKIAKLPPP 68 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +A + A + P V AG GF+NL L+ +L +++++ +G YG + G G + Sbjct: 69 KLAAELAAALAALPSVAEAAPAGPGFVNLRLAEDFLLGQVATVLRAGEAYGDSQAGGGVR 128 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VN+E+VSANPTGPMHVGHCR AVVGD LA+L+A +G VT+EYYINDAGAQ+ L + + Sbjct: 129 VNVEYVSANPTGPMHVGHCRGAVVGDALANLLAKAGAAVTKEYYINDAGAQVQALGYAAY 188 Query: 183 WRYQQALYNN--DSDLPEG-----YYPGVYLKHVGKELADKYSSELL--NFPEEK--WLP 231 WRY QAL + E Y G YL VG+ L +K+ L P E WL Sbjct: 189 WRYLQALGTTLTEEAYAEAVPGGLQYRGDYLVPVGEALKEKFGDSLAPGAVPAEASLWLD 248 Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291 V++++V AMM+ IR+DL AL + HD+FISE R I L+ +G VYEG+L Sbjct: 249 TVRNFAVDAMMEAIREDLAALGVAHDVFISEAQLVR--DGVADAAIAALSEKGLVYEGVL 306 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351 PPK KT + R Q LF ST GDDVDRPL KSDGS TYFA D+ K RG Sbjct: 307 EPPKGKTPDDWE-PRPQTLFASTKFGDDVDRPLRKSDGSNTYFANDIGNHADKIARGMQQ 365 Query: 352 MIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 ++ V G+DH GYVKR++A A+S+ ++VLLC++V++ + G P++MSKRAG +ITLR Sbjct: 366 LVQVWGADHGGYVKRMQAATKALSDGAVPLDVLLCQIVKVMKGGEPVRMSKRAGTYITLR 425 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 ++DEVG D+VRF ML RK+ ++FD +V EQS++NPVFYVQYA+ARCRS+ RQA D Sbjct: 426 DLIDEVGRDAVRFTMLTRKSDAQMEFDLDRVVEQSRDNPVFYVQYAHARCRSVLRQAGDP 485 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 + D P S D +EL LI +A +PR++E A A+EP+++AFYL DLA+ Sbjct: 486 AREALAD------APLSSLKDAAELALIRRIAAWPRIVEAAAAAREPHRIAFYLGDLAAD 539 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 FH W+ GR++ LRF+QA + T RL LV A A +I SGL ++GV+ EM Sbjct: 540 FHILWNRGRDDATLRFIQAEAPEATRARLALVAATAIVIRSGLAVMGVQPVEEM 593 >gi|254479329|ref|ZP_05092667.1| arginyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653] gi|214034722|gb|EEB75458.1| arginyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653] Length = 555 Score = 567 bits (1462), Expect = e-159, Method: Composition-based stats. Identities = 195/582 (33%), Positives = 319/582 (54%), Gaps = 32/582 (5%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 + + L E + + + + + +E P++ HG L+TN AM+++R + P IA Sbjct: 4 EIKDIVLKALNEAKKEGLLNFESIPDVEVEEPKEKQHGDLATNFAMVMAREAKMAPRKIA 63 Query: 66 ELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 E+I +++ + V +AG GFIN +L+ ++L + L I G +YGR +GKG KV Sbjct: 64 EIITSKMNTSGTFIEKVEVAGPGFINFFLNQNFLIETLKLIHKRGKDYGRVNLGKGKKVQ 123 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGPMH+G+ R +GD LAS++ ++GY V+RE+YINDAG QI S+ R Sbjct: 124 VEFVSANPTGPMHMGNARGGAIGDVLASILDYAGYNVSREFYINDAGNQIEKFGYSLEAR 183 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 Y Q L D+++PEG Y G + KE + Y + + P E+ + +Y ++ ++ Sbjct: 184 YLQLL-GIDAEVPEGGYHGEDIIDRAKEFLEIYGDKYKDVPSEERRKALIEYGLKKNIEK 242 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 +++DL I++D++ SE + D + +I+ L +GY YE Sbjct: 243 MKEDLALYGIEYDVWFSEQSLY--DSGEVYKVIEELTEKGYTYE---------------- 284 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGY 363 L F+ T+ G + D L++S+G TY A+D+AY K K+ RGFD +I V G+DH G+ Sbjct: 285 KDGALWFKMTLFGAEKDDVLVRSNGIPTYLASDIAYHKNKFVTRGFDWVINVWGADHHGH 344 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + ++ A+ +++V+L +LV+L G ++MSKR G ITLR +++EVG D+ R Sbjct: 345 IAPMKGAMKALGIDPNRLDVVLMQLVKLIEGGQVVRMSKRTGKMITLRDLIEEVGKDAAR 404 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 F R ++FD K+Q+ ENPVFYVQYA+AR SI RQ +++ ++ Sbjct: 405 FFFNMRSPDSPIEFDLDLAKQQTNENPVFYVQYAHARICSIIRQLEEMGVKIE----NIE 460 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + + E+ LI LA +P I A P+++ Y+ D+AS+FH ++ R Sbjct: 461 DVDLGLLKEEEEVDLIKKLAYFPEEITIAAKTLAPHRITRYVIDVASLFHSFYNSHR--- 517 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V+ L R L+ AV +++ + L+I+ V +P M Sbjct: 518 ----VKGAEENLMKARFALILAVKTVLKNALDILKVTAPERM 555 >gi|292669448|ref|ZP_06602874.1| arginine-tRNA ligase [Selenomonas noxia ATCC 43541] gi|292648901|gb|EFF66873.1| arginine-tRNA ligase [Selenomonas noxia ATCC 43541] Length = 552 Score = 567 bits (1462), Expect = e-159, Method: Composition-based stats. Identities = 202/586 (34%), Positives = 305/586 (52%), Gaps = 35/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEK-KILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + + ++ + ++ + L RI++E P + G +TN AM +R Sbjct: 1 MDIKQQIEQAIMRAVEAAKAEGQLPESGALPRILLEEPPEKELGDFATNFAMQSARVFRQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA I + D +D IAG GF+NLYL + L L +++ +G EYG+ + Sbjct: 61 PPQKIAAAIKEHLMGD-WLDHAEIAGPGFLNLYLKKTVLADTLRAVLAAGEEYGQLPAQE 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 + +E+VSANPTGP+HVGH R A VG L L+ +GY V EYY+NDAG Q+N LA+ Sbjct: 120 AGHIQVEYVSANPTGPLHVGHGRGAAVGSALVKLLRTAGYAVDSEYYVNDAGNQMNLLAV 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY + L + PE Y G + + + D+ + L EE+ L I +D + + Sbjct: 180 SVNARYLELL-GKPAVFPENGYHGADIVDTAQRIIDRDGDKYLLLSEEERLQIFQDLAYR 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 + + +DL + D + SE H P +R ++D L +G YE Sbjct: 239 EKLAALEEDLADFGVTFDRWFSERTLH---PGAVRRVVDVLLERGSAYE----------- 284 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + RST GDD DR + + +G TY AAD+AY KY RG+ MI + G+D Sbjct: 285 -----KDGAVWLRSTDYGDDKDRVIFRDNGVPTYLAADIAYHADKYARGYGRMINIWGAD 339 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYV R++A AA+ + ++ VLL ++V LYRDG +K+SKR G+ +TLR +++EVG Sbjct: 340 HHGYVARVKAAIAALGDDPERLTVLLLQMVSLYRDGALVKLSKRTGETVTLRELMEEVGV 399 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ L R LDFD K+++ ENPV+Y+QYA+AR SIFRQA + + Sbjct: 400 DAARYFFLMRSLDSQLDFDLDLAKKRTNENPVYYIQYAHARISSIFRQADEAG------I 453 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 ++ E D +E+ LI +A YP I A P ++A Y ++LA FH ++ Sbjct: 454 AAKDGAELELLTDETEIALIKKIAAYPEEIARAAAELAPQRIARYSHELAGAFHSFYNKC 513 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R + L RL LV A +I + L ++GV +P +M Sbjct: 514 R-------IIGQEPALASARLALVSAAGRVIRNSLGVLGVSAPEKM 552 >gi|238650531|ref|YP_002916383.1| arginyl-tRNA synthetase [Rickettsia peacockii str. Rustic] gi|259511656|sp|C4K184|SYR_RICPU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|238624629|gb|ACR47335.1| arginyl-tRNA synthetase [Rickettsia peacockii str. Rustic] Length = 576 Score = 567 bits (1462), Expect = e-159, Method: Composition-based stats. Identities = 247/585 (42%), Positives = 365/585 (62%), Gaps = 9/585 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +F ++LK + ++ ++I + IE P+D +G LS+N AMI++ + Sbjct: 1 MNIF----NQLKQDIIVASRQLYNNQEIANTATIEIPKDSFNGDLSSNVAMIIAAKESIA 56 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A + P + S+ IAG GFIN + + + I+ ++ I K Sbjct: 57 PREVALKFKEVLITLPYIASIEIAGPGFINFTIKADSWQASIKDILQHEEKFFEIDIDKS 116 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +NIE+VSANPTGPMH+GH R AV GD LA ++ Y VT+EYY+NDAG+QIN L + Sbjct: 117 RNINIEYVSANPTGPMHIGHARGAVYGDVLARILQKVSYSVTKEYYVNDAGSQINDLVST 176 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V RY++AL +P G YPG YL +G+ LA +Y ++LL + IVK ++V+ Sbjct: 177 VLLRYKEAL-GEQITIPAGLYPGEYLIPLGQILAKEYGNKLLTMNYAERFKIVKSFAVEK 235 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 M+ + R DL L I+HDIF SE H D I + + L R G +YEG LP PK K + Sbjct: 236 MLDLNRKDLADLGIKHDIFFSEQSLH--DKGEIEETVKLLERMGLIYEGTLPAPKGKIHE 293 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + D +R Q LF+ST GD DRP+ K+DGS++YFA+DLAY K K ERG +++IYV+G+DH Sbjct: 294 EWD-NRVQKLFKSTKYGDSQDRPIEKADGSWSYFASDLAYAKDKIERGANHLIYVLGADH 352 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 SGYVKR+EA+ A+ +++ +++V +C+LV +G+P+KMSKR G+F +++ V EVG D Sbjct: 353 SGYVKRIEAIVKALGKEQVKVDVKICQLVNFVENGVPVKMSKRLGNFASVQDVNHEVGKD 412 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +RFMML R+N + LDFD KVKEQS+ENP+FYVQYA+ R SI +A+++ P+ ++ F Sbjct: 413 IIRFMMLTRQNDKPLDFDLVKVKEQSRENPIFYVQYAHVRTISILSKARELIPE-SYNNF 471 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 E+++I LA + + +E + EP+++AFYL +LAS FH W+ G+ Sbjct: 472 ESGKYDLSLLSSEEEIEIIKLLASWTKTLEASAKYFEPHRIAFYLINLASKFHSMWNFGK 531 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 EN RFV +N++LT+ RL L A+ +I SGL +IGVE N+M Sbjct: 532 ENSDYRFVIESNKELTLARLALASAIQKVIASGLEVIGVEPMNKM 576 >gi|237785875|ref|YP_002906580.1| arginyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385] gi|237758787|gb|ACR18037.1| Arginyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM 44385] Length = 594 Score = 567 bits (1461), Expect = e-159, Method: Composition-based stats. Identities = 184/585 (31%), Positives = 289/585 (49%), Gaps = 40/585 (6%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 + S+ + + + + +L + +ERPR+ HG +TN A+ +++ +G P + Sbjct: 45 ELSTLIATRAESVLSHHGKDASVLPLTVTVERPRNPEHGDYATNLALQIAKKVGTSPREL 104 Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 A + + + +++V +AG GF+N+ L+ + +I+ I+ G +G + +N Sbjct: 105 AGWLAEDLATNSAIETVDVAGPGFLNIRLAAAAQGEIVGRILAEGERFGSSSELSDEVIN 164 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGP+H+G R A VGD L + AF G +TREYY ND G QI+ A S+ Sbjct: 165 LEFVSANPTGPIHLGGTRWAAVGDALGRIFAFRGASITREYYFNDHGRQIDRFARSLVAA 224 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 PE Y G Y++ + + DK+ E P E+ + + V M Sbjct: 225 AL------GQPTPEDGYGGEYIQDIASSVVDKH-PEATQLPLEERQELFRKEGVDLMFAH 277 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 I+ L D+F E+ + + I L G +YE Sbjct: 278 IKRTLHEFGTDFDVFFHENSLF--ESGAVDQAIQKLKDNGNLYEA--------------- 320 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 RST GDD DR ++KSDG Y A D+AY + K ERG + IY++G+DH GY+ Sbjct: 321 -DGAWWLRSTSFGDDKDRVVIKSDGDAAYIAGDIAYIRDKIERGHNLCIYMLGADHHGYI 379 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 RL+A A A+ Q+ VL+ ++V L RDG +KMSKRAG ITL +V+ +G D+ R+ Sbjct: 380 ARLKAAAQALGYDPTQVEVLIGQMVNLVRDGKAVKMSKRAGTVITLDDLVELIGVDAARY 439 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF---PDLDFDLFP 481 ++ + LD D Q+ +NPVFYVQYA+AR S+ R+A+ D D+ L Sbjct: 440 ALIRSSVDQTLDIDMDLWARQTNDNPVFYVQYAHARLCSLGRKAQAAGILVKDPDYSLL- 498 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + E LI L E+P V+ A +EP+++A Y+ +LA FH + + Sbjct: 499 ---------VNDYEGALIRTLGEFPSVVGTAAELREPHRIARYMEELAGTFHRFYDSCQI 549 Query: 542 NPRLRFVQANNRK-LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P+ + + RL L A I + L+++GV +P M Sbjct: 550 LPKKSEPTGDEAAPIVHARLALAQATRQTIANALSLLGVSAPERM 594 >gi|257056971|ref|YP_003134803.1| arginyl-tRNA synthetase [Saccharomonospora viridis DSM 43017] gi|256586843|gb|ACU97976.1| arginyl-tRNA synthetase [Saccharomonospora viridis DSM 43017] Length = 551 Score = 567 bits (1461), Expect = e-159, Method: Composition-based stats. Identities = 201/582 (34%), Positives = 307/582 (52%), Gaps = 35/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 A + +++ +I ++ IL +++ +ERPR+ HG +TN A+ +++ GL P Sbjct: 4 AALADLVRSSAVQIFTDRGLDLSILPEQVTVERPRNPEHGDYATNLALQVAKKAGLQPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 AE + I P + S +AG GF+NL L+ +I+ ++ +G +YGR G K+ Sbjct: 64 FAEALAEVISSAPGIASAEVAGPGFLNLRLAADAQGEIVRQVLDAGADYGRGDSLVGQKI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L+A G EVTREYYINDAGAQI+ A S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRLLAAQGAEVTREYYINDAGAQIDRFAESLLA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 PE Y G Y+ + E+ + E+L+ P+E+ K V+ M++ Sbjct: 184 AA------EGRPTPEDGYAGAYITDIAAEILRRE-PEVLSLPDEERFATFKRLGVELMLE 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L D++ SE H + I+ +L G +Y+ Sbjct: 237 EIKQSLSDFGTHFDVWFSEKSLHT--SGELESILADLKESGSLYQ--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 RST GDD DR ++KSDG+ Y A D+AY + K +RGFD +Y++G+DH GY Sbjct: 280 -KDGAWWLRSTEHGDDKDRVVIKSDGTLAYIAGDVAYLRNKLDRGFDLCVYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA+ + VL+ +LV L G P++MSKRAG +T+ +V+ VG D+ R Sbjct: 339 IARLKAAAAAMGHSPDTVEVLIGQLVNLVSGGKPVRMSKRAGTVVTMEDLVEAVGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + + LD D +++++ ENPVFYVQYA+AR S+ R A + +L PR+ Sbjct: 399 YELCRYSVDASLDIDLDLLRKRTNENPVFYVQYAHARLASLQRNAAE------LNLEPRS 452 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 E LI + E+P V+ A +EP+++A YL LAS +H + R P Sbjct: 453 DADVSLLTHPREGDLIRTIGEFPSVLRTAAELREPHRVARYLESLASAYHKFYDVARVLP 512 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + LT RL L A ++ +GL+++GV +P M Sbjct: 513 QG---DEEPTPLTYARLALCEATRQVLANGLSLLGVSAPERM 551 >gi|315659043|ref|ZP_07911910.1| arginine--tRNA ligase [Staphylococcus lugdunensis M23590] gi|315496167|gb|EFU84495.1| arginine--tRNA ligase [Staphylococcus lugdunensis M23590] Length = 555 Score = 567 bits (1461), Expect = e-159, Method: Composition-based stats. Identities = 201/587 (34%), Positives = 312/587 (53%), Gaps = 34/587 (5%) Query: 1 MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + L N +K I ++ + + I IE P+D +G STN AM+L++ Sbjct: 1 MNIIEQVKQTLINEIKTSIKSAELIQDQSIPEIKIEIPKDSKNGDYSTNIAMVLTKLAKR 60 Query: 60 DPLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +P IA+ IV + V IAG GFIN YL YL I+ + G YG Sbjct: 61 NPREIAQAIVDHLDTTKAHVKQVDIAGPGFINFYLDNYYLTAIIPEAISKGAHYGYASEP 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 K ++ +E+VSANPTG +H+GH R A VGD+LA+++ +GY+VTREYYINDAG QI LA Sbjct: 121 KNKRILLEYVSANPTGDLHIGHARNAAVGDSLANILIAAGYDVTREYYINDAGNQITNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 S+ R+ +AL + +PE Y G + +GK+LA K+ E+ ++ + L + V Sbjct: 181 RSIETRFFEALGDTSHKMPEDGYNGKDIIEIGKDLAQKH-PEIKDYSDHDRLKTFRQLGV 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + M ++ DL N D + SE + D I + + + GY YE Sbjct: 240 EYEMVKLKRDLADFNAHFDSWFSETTLY--DNGAIENTLARMKENGYTYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 R++ DD DR L+KSDGSYTYF D AY K RG D +I +MG+ Sbjct: 288 ------KDGATWLRTSDFKDDKDRVLIKSDGSYTYFTPDTAYHYDKINRGNDILIDLMGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A ++ + + ++VRL ++G +KMSKR G+ ITLR ++DEVG Sbjct: 342 DHHGYINRIKASLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ + R DFD KEQS++NP++Y QYA+AR SI +QA+ D+ D Sbjct: 402 VDAARYFLTMRSPDSHFDFDMELAKEQSQDNPIYYAQYAHARICSILKQARAQGIDITTD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + + + L+ +AE+ +VI+NA + P++L Y+ DLA+ FH ++ Sbjct: 462 VDFSLI------TNDKAIDLLKKVAEFEQVIDNAAEHRAPHRLTNYIQDLAAAFHKFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++++ T + L+ AV +++ L ++GV +P M Sbjct: 516 EK-------VLTDHQEKTKALVALIEAVRITLHNALTLVGVSAPESM 555 >gi|118579453|ref|YP_900703.1| arginyl-tRNA synthetase [Pelobacter propionicus DSM 2379] gi|118502163|gb|ABK98645.1| arginyl-tRNA synthetase [Pelobacter propionicus DSM 2379] Length = 563 Score = 567 bits (1461), Expect = e-159, Method: Composition-based stats. Identities = 200/587 (34%), Positives = 298/587 (50%), Gaps = 37/587 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 +S ++ L+ ++ + + I P + HG S N AM +++ P +AE Sbjct: 6 IASLVETALRAASAAQEITSPSIPAVTIGVPANPDHGDYSCNIAMQMAKAERRAPRQVAE 65 Query: 67 LIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 I + + IAG GFIN ++SP+ +++L I G YGR G+ KV + Sbjct: 66 TISRHLGDGKGLLSKTDIAGPGFINFFVSPAAWQRLLPEIESQGATYGRTATGEERKVQV 125 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+H+GH R A +GDT+ L+ +G+ VTRE+Y NDAG QI LALSV R Sbjct: 126 EFVSANPTGPLHIGHGRGAAIGDTICRLLDAAGWNVTREFYYNDAGQQITNLALSVQARC 185 Query: 186 QQALYNNDSDLPEGYYPGVYLKHV-----GKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 + ND P Y G Y++ V +E D + + + L +++++V + Sbjct: 186 L-GIDTNDPRWPADGYQGEYIRDVAAAYLARETVDADDRHVTALGDPQNLDAIREFAVAS 244 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 + + DLKA + D+F E + D + +++ L +G+ YE Sbjct: 245 LRREQDLDLKAFGVHFDVFTLESSLY--DDGRVDNVVRQLVEKGHTYE------------ 290 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 L R+T GDD DR + KSDG YTYF D+AY K+ERGF +I GSDH Sbjct: 291 ----QEGALWLRTTEFGDDKDRVMRKSDGGYTYFVPDVAYHLAKWERGFTRVINEQGSDH 346 Query: 361 SGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 + R+ A A+ + +L ++V + R G +K+SKRAG ++TLR ++DEVG Sbjct: 347 HSTITRVRAGLQALDRGIPQGWPEYVLHQMVTVMRGGEEVKISKRAGSYVTLRDLIDEVG 406 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ RF + RK L FD KEQS +NPV+YVQYA+AR SIF A + L D Sbjct: 407 RDATRFFFIMRKPDSQLVFDIDLAKEQSPDNPVYYVQYAHARICSIFENAVEKGYALPTD 466 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + ES + I LA P ++++ EP++L YL DLA+ FH ++ Sbjct: 467 AGSVRLELLESTEELQL---IKLLAALPNTVDDSARFFEPHRLTNYLTDLAASFHSFYNR 523 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R V N LT RL L+ A +N+ L+I+G+ +P M Sbjct: 524 NR-------VLTENSDLTGARLYLLKRTAQTLNNALSILGISAPERM 563 >gi|254821291|ref|ZP_05226292.1| arginyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950] Length = 550 Score = 566 bits (1460), Expect = e-159, Method: Composition-based stats. Identities = 192/582 (32%), Positives = 290/582 (49%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LKN + + ++ +L + +ERPR+ HG ++N AM L + +G +P Sbjct: 4 ADLAELLKNTAAAVLAERGLDAAMLPATVTVERPRNPEHGDYASNLAMQLGKKVGANPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + V S +AG GFINL L S ++++++ G YG + G + Sbjct: 64 LAGWLAEALAQADGVASAEVAGPGFINLRLEASAQAVVVNNVIDGGARYGHSDALAGHHI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L++ G V REYY ND GAQI+ A S+ Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGAVVVREYYFNDHGAQIDRFASSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + ++ K L+ P + + V M Sbjct: 184 AAK------GEPTPEDGYAGAYINDIAAQIVQKAPDA-LSLPAPEMHETFRAIGVDLMFT 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I++ L D++ ED H + + + L G +YE Sbjct: 237 HIKESLHEFGTDFDVYTHEDAMHT--SGRVDEALAKLRETGNIYE--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 R++ GDD DR ++KSDG Y A D+AY+ K +RGFD IY++G+DH GY Sbjct: 280 -KDGATWLRASAFGDDKDRVVIKSDGKPAYIAGDIAYYLDKRQRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+AVAAA+ E A + VL+ ++V L RDG P++MSKRAG +TL +V+ +G D+ R Sbjct: 339 IARLKAVAAALGEDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D S ENPV+YVQYA+AR ++ R A ++ D Sbjct: 399 YSLIRSSVDTPIDIDLALWSSASNENPVYYVQYAHARLSALARNAAELGLIADTGNLGL- 457 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 E L+ L E+PRV+ A+ +EP+++ YL DLA +H + R P Sbjct: 458 ------LDHDKEGTLLRTLGEFPRVLTTASSLREPHRICRYLEDLAGDYHRFYDSCRVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L RL L A +I +GL I+GV +P M Sbjct: 512 QG---DEQPTDLHTARLALCQATRQVIANGLAILGVTAPERM 550 >gi|315443349|ref|YP_004076228.1| arginyl-tRNA synthetase [Mycobacterium sp. Spyr1] gi|315261652|gb|ADT98393.1| arginyl-tRNA synthetase [Mycobacterium sp. Spyr1] Length = 550 Score = 566 bits (1459), Expect = e-159, Method: Composition-based stats. Identities = 193/582 (33%), Positives = 298/582 (51%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LK + + ++ L D + +ERPR+ HG +TN A+ L + +G +P Sbjct: 4 ADLAQLLKATAAAVLAEHGLDSAALPDTVTVERPRNPEHGDYATNLALQLGKKVGANPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + + + +AG GF+NL + S ++S+++ +G +YG + + G KV Sbjct: 64 LAGWLAEALAASDGIAAADVAGPGFVNLRIEASAQNVMVSNVLSAGADYGHSAVLAGKKV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L+ G VTREYY ND GAQI+ + S+ Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGAAVTREYYFNDHGAQIDRFSNSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + ++ K +L+ P+++ + V M Sbjct: 184 AAK------GEPAPEDGYAGTYIADIASQVVAKE-PGVLDQPDDRMRETFRAIGVNMMFD 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I++ L D++ ED H + ID L G+ YE Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMHT--SGRVEQAIDKLRETGFAYE--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 + R+T GDD DR ++KSDG Y A DLAYF K +RGFD IY++G+DH GY Sbjct: 280 -KDGAVWLRTTDFGDDKDRVVIKSDGKPAYIAGDLAYFLDKRKRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA+ + + VL+ ++V L RDG P++MSKRAG ITL +V+ +G D+ R Sbjct: 339 IARLKASAAALGDDPDTVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D S ENPV+YVQYA+AR ++ R A ++ D Sbjct: 399 YSLIRSSVDTPIDIDLELWSSASNENPVYYVQYAHARLSALARNAAELGIAPD------- 451 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + E LI ++ E+PR++ A +EP++++ YL DLA +H + R P Sbjct: 452 TAHLDLLTHDKEGVLIRNIGEFPRILATAAELREPHRVSRYLEDLAGDYHRFYDACRVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L RL L A +I +GL+I+GV +P M Sbjct: 512 QG---DEAPGDLHAARLALCAATRQVIANGLDILGVSAPERM 550 >gi|34580946|ref|ZP_00142426.1| arginyl-tRNA synthetase [Rickettsia sibirica 246] gi|28262331|gb|EAA25835.1| arginyl-tRNA synthetase [Rickettsia sibirica 246] Length = 576 Score = 566 bits (1458), Expect = e-159, Method: Composition-based stats. Identities = 247/585 (42%), Positives = 364/585 (62%), Gaps = 9/585 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +F ++LK + ++ ++I + IE P+D +G LS+N AMI++ + Sbjct: 1 MNIF----NQLKQDIIVASRQLYNNQEIANTATIEIPKDSFNGDLSSNIAMIIAAKESIA 56 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A + P + S+ IAG GFIN + + + I+ ++ I K Sbjct: 57 PREVALKFKEVLITLPYIASIEIAGPGFINFTIKADSWQASIKDILQHEEKFFEIDIDKS 116 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +NIE+VSANPTGPMH+GH R AV GD LA ++ Y VT+EYY+NDAG+QIN L + Sbjct: 117 KNINIEYVSANPTGPMHIGHARGAVYGDVLARILQKVSYSVTKEYYVNDAGSQINDLVST 176 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V RY++AL +P G YPG YL +G+ LA +Y ++LL + I+K ++V+ Sbjct: 177 VLLRYKEAL-GEQITIPAGLYPGEYLIPLGQILAKEYGNKLLTMNYAERFKIIKSFAVEK 235 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 M+ + R DL L I+HDIF SE H D I + + L R G +YEG LP PK K + Sbjct: 236 MLDLNRKDLADLGIKHDIFFSEQSLH--DKGEIEETVKLLERMGLIYEGTLPAPKGKIHE 293 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + D +R Q LF+ST GD DRP+ K+DGS++YFA+DLAY K K ERG +++IYV+G+DH Sbjct: 294 EWD-NRVQKLFKSTKYGDSQDRPIEKADGSWSYFASDLAYAKDKIERGANHLIYVLGADH 352 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 SGYVKR+EA+ A+ +++ +++V +C+LV +G+P+KMSKR G F +++ V EVG D Sbjct: 353 SGYVKRIEAIVKALGKEQVKVDVKICQLVNFVENGVPVKMSKRLGSFASVQDVNHEVGKD 412 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +RFMML R+N + LDFD KVKEQS+ENP+FYVQYA+ R SI +AK++ P+ ++ F Sbjct: 413 IIRFMMLTRQNDKPLDFDLVKVKEQSRENPIFYVQYAHVRTISILSKAKELMPE-SYNNF 471 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 E+++I LA + + +E + EP+++AFYL +LAS FH W+ G+ Sbjct: 472 ESGKYDLSLLSSEEEIEIIKLLASWTKTLEASAKYFEPHRIAFYLINLASKFHSMWNFGK 531 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 EN RFV +N++LT+ RL L A+ +I SGL +IGVE N+M Sbjct: 532 ENSDYRFVIESNKELTLARLALASAIQKVIASGLEVIGVEPMNKM 576 >gi|114567927|ref|YP_755081.1| arginyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122317211|sp|Q0AU94|SYR_SYNWW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|114338862|gb|ABI69710.1| arginyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 559 Score = 566 bits (1458), Expect = e-159, Method: Composition-based stats. Identities = 202/590 (34%), Positives = 323/590 (54%), Gaps = 36/590 (6%) Query: 1 MY----LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRP 56 M + A S + L++ + ++ + +IE PR+ HG + N A++++R Sbjct: 1 MNPIQKVLASLHSMVIEALEKAKSRDLIKFDQIPEFLIEVPREKEHGDFACNVALLMARQ 60 Query: 57 LGLDPLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115 P IAE++V ++ + + IAG GFIN +L S+L +I + S +YG N Sbjct: 61 ARQAPRAIAEVLVELMEASGRPVEKIEIAGAGFINFFLDRSWLYEIPLMVYKSKDKYGFN 120 Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175 K KV +EFVSANPTG +H+G+ R +GDTLA+++ +GYEV RE+YINDAG QI Sbjct: 121 GE-KAKKVQVEFVSANPTGNLHMGNARGGAIGDTLANILERAGYEVEREFYINDAGNQIE 179 Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235 S+ RY Q L +D PE Y G L + + +Y L + P E+ I+ D Sbjct: 180 IFTDSMEARYLQ-LTGHDVQFPENGYAGRDLIDTVRNIIARYGEGLYDLPREERRQIIVD 238 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 ++++ + I+ L + I +D++ SE H + I + ++L +GY+YE Sbjct: 239 FALEEKIDYIQKTLASFGINYDVWFSEKSLH--ENGKIMAVFNDLRDKGYIYES------ 290 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 F+ST GD+ D +L+++G TYF AD+AY + K+ERGFD +I V Sbjct: 291 ----------EGAWWFKSTAFGDEKDEVVLRANGMPTYFMADIAYHQNKFERGFDWVINV 340 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 G+DH G+V R++ A+ A++++LL +LVRLYR G ++MSKR G ++L +++ Sbjct: 341 WGADHHGHVARMKGAIEALGYDPARLDILLMQLVRLYRGGNIVRMSKRTGTTVSLDELIE 400 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 +VG D+ RF + R LDFD +++S+ENPV+YVQYA+AR SIFRQA+ Sbjct: 401 DVGKDAARFFFVMRSPDSHLDFDLELARQKSQENPVYYVQYAHARICSIFRQARAEG--- 457 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + N I + EL ++ +A++P I A P+++A Y+ DLA++FH Sbjct: 458 -ITMAEINEIDISCLKEEEELAILRKIADFPEEISIAARTLAPHRIARYVLDLAALFHSF 516 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++H R V +NR L RL L+ I++ L+++GV +P +M Sbjct: 517 YNHHR-------VLNDNRALQDARLLLMEITRITIHNALDVLGVAAPEQM 559 >gi|15892018|ref|NP_359732.1| arginyl-tRNA synthetase [Rickettsia conorii str. Malish 7] gi|21542254|sp|Q92JH2|SYR_RICCN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|15619134|gb|AAL02633.1| arginyl-tRNA synthetase [Rickettsia conorii str. Malish 7] Length = 576 Score = 566 bits (1458), Expect = e-159, Method: Composition-based stats. Identities = 247/585 (42%), Positives = 364/585 (62%), Gaps = 9/585 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +F ++LK + ++ ++I + IE P+D +G LS+N AMI++ + Sbjct: 1 MNIF----NQLKQDIIVASRQLYNNQEIANTATIEIPKDSFNGDLSSNIAMIIAAKESIA 56 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A + P + S+ IAG GFIN + + + I+ ++ I K Sbjct: 57 PREVALKFKEVLITLPYIASIEIAGPGFINFTIKADSWQASIKDILQHEEKFFEIDIDKS 116 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +NIE+VSANPTGPMH+GH R AV GD LA ++ Y VT+EYY+NDAG+QIN L + Sbjct: 117 RNINIEYVSANPTGPMHIGHARGAVYGDVLARILQKVSYSVTKEYYVNDAGSQINDLVST 176 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V RY++AL +P G YPG YL +G+ LA +Y ++LL + I+K ++V+ Sbjct: 177 VLLRYKEAL-GEQITIPAGLYPGEYLIPLGQILAKEYGNKLLTMNYAERFKIIKSFAVEK 235 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 M+ + R DL L I+HDIF SE H D I + + L R G +YEG LP PK K + Sbjct: 236 MLDLNRKDLADLGIKHDIFFSEQSLH--DKGEIEETVKLLERMGLIYEGTLPAPKGKIHE 293 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + D +R Q LF+ST GD DRP+ K+DGS++YFA+DLAY K K ERG +++IYV+G+DH Sbjct: 294 EWD-NRVQKLFKSTKYGDSQDRPIEKADGSWSYFASDLAYAKDKIERGANHLIYVLGADH 352 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 SGYVKR+EA+ A+ +++ +++V +C+LV +G+P+KMSKR G F +++ V EVG D Sbjct: 353 SGYVKRIEAIVKALGKEQVKVDVKICQLVNFVENGVPVKMSKRLGSFASVQDVNHEVGKD 412 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +RFMML R+N + LDFD KVKEQS+ENP+FYVQYA+ R SI +AK++ P+ ++ F Sbjct: 413 IIRFMMLTRQNDKPLDFDLVKVKEQSRENPIFYVQYAHVRTISILSKAKELMPE-SYNNF 471 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 E+++I LA + + +E + EP+++AFYL +LAS FH W+ G+ Sbjct: 472 ESGKYDLSLLSSEEEIEIIKLLASWTKTLEASAKYFEPHRIAFYLINLASKFHSMWNFGK 531 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 EN RFV +N++LT+ RL L A+ +I SGL +IGVE N+M Sbjct: 532 ENSDYRFVIESNKELTLARLALASAIQKVIASGLEVIGVEPMNKM 576 >gi|229586306|ref|YP_002844807.1| arginyl-tRNA synthetase [Rickettsia africae ESF-5] gi|259511655|sp|C3PMA4|SYR_RICAE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|228021356|gb|ACP53064.1| Arginyl-tRNA synthetase [Rickettsia africae ESF-5] Length = 576 Score = 566 bits (1458), Expect = e-159, Method: Composition-based stats. Identities = 246/585 (42%), Positives = 364/585 (62%), Gaps = 9/585 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +F ++LK + ++ ++I + IE P+D +G LS+N AMI++ + Sbjct: 1 MNIF----NQLKQDIIVASRQLYNNQEIANTATIEIPKDSFNGDLSSNIAMIIAAKESIA 56 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A + P + S+ IAG GFIN + + + I+ ++ I K Sbjct: 57 PREVALKFKEVLITLPYIASIEIAGPGFINFTIKADSWQASIKDILQHEEKFFEIDIDKS 116 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +NIE+VSANPTGPMH+GH R A+ GD LA ++ Y VT+EYY+NDAG+QIN L + Sbjct: 117 KNINIEYVSANPTGPMHIGHARGAIYGDVLARILQKVSYSVTKEYYVNDAGSQINDLVST 176 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V RY++AL +P G YPG YL +G+ LA +Y ++LL + I+K ++V+ Sbjct: 177 VLLRYKEAL-GEQITIPAGLYPGEYLIPLGQILAKEYGNKLLTMNYAERFKIIKSFAVEK 235 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 M+ + R DL L I+HDIF SE H D I + + L R G +YEG LP PK K + Sbjct: 236 MLDLNRKDLADLGIKHDIFFSEQSLH--DKGEIEETVKLLERMGLIYEGTLPAPKGKIHE 293 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + D +R Q LF+ST GD DRP+ K+DGS++YFA+DLAY K K ERG +++IYV+G+DH Sbjct: 294 EWD-NRVQKLFKSTKYGDSQDRPIEKADGSWSYFASDLAYAKDKIERGANHLIYVLGADH 352 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 SGYVKR+EA+ A+ +++ +++V +C+LV +G+P+KMSKR G F +++ V EVG D Sbjct: 353 SGYVKRIEAIVKALGKEQVKVDVKICQLVNFVENGVPVKMSKRLGSFASVQDVNHEVGKD 412 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +RFMML R+N + LDFD KVKEQS+ENP+FYVQYA+ R SI +AK++ P+ ++ F Sbjct: 413 IIRFMMLTRQNDKPLDFDLVKVKEQSRENPIFYVQYAHVRTISILSKAKELMPE-SYNNF 471 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 E+++I LA + + +E + EP+++AFYL +LAS FH W+ G+ Sbjct: 472 ESGKYDLSLLSSEEEIEIIKLLASWTKTLEASAKYFEPHRIAFYLINLASKFHSMWNFGK 531 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 EN RFV +N++LT+ RL L A+ +I SGL +IGVE N+M Sbjct: 532 ENSDYRFVIESNKELTLARLALASAIQKVIASGLEVIGVEPMNKM 576 >gi|329723123|gb|EGG59655.1| arginine--tRNA ligase [Staphylococcus epidermidis VCU144] Length = 553 Score = 566 bits (1458), Expect = e-159, Method: Composition-based stats. Identities = 196/586 (33%), Positives = 309/586 (52%), Gaps = 34/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L ++ K + + I I IE P+D +G S+N AM+L++ + Sbjct: 1 MNIIDQVKQTLIEEIEASIRKANLTEDI-PEIKIEIPKDTKNGDYSSNIAMVLTKIAKRN 59 Query: 61 PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ IV + V IAG GFIN YL YL I+ + G +G K Sbjct: 60 PREIAQAIVDHLDTSKAHVKQVDIAGPGFINFYLDNQYLTDIIPEAITKGDRFGYATQSK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 T + +E+VSANPTG +H+GH R A VGD+LA+++ +GY VTREYYINDAG QI LA Sbjct: 120 NTNILLEYVSANPTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ RY +AL + ++P Y G + +GK+LA K+ E+ ++ +E+ L + V Sbjct: 180 SIEARYFEALGDTSYEMPADGYNGKDIIEIGKDLAVKH-PEIKDYSDEERLKTFRQLGVD 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M+ ++ DL N+ D + SE + + I++ + + GY YE Sbjct: 239 YEMEKLKKDLSDFNVHFDNWFSETSLY--ENGAIKNTLSKMKELGYTYEA---------- 286 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 R++ DD DR L+K DG+YTYF D AY K RG D +I +MG+D Sbjct: 287 ------DGATWLRTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A ++ + + ++VRL ++G +KMSKR G+ ITLR ++DEVG Sbjct: 341 HHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGI 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R DFD KEQS++NP++Y QYA+AR SI +QAK+ ++ D Sbjct: 401 DAARYFLTMRSPDSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEQGIEVSTDA 460 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + + L+ +AE+ IE+A + P++L Y+ DLA+ FH ++ Sbjct: 461 DFSKI------NNDKAIDLLKKVAEFESTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAE 514 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ + T + ++ AV +++ L ++GV +P M Sbjct: 515 K-------VLTDDTEKTKAHVAMIEAVRITLHNALALVGVTAPESM 553 >gi|38233629|ref|NP_939396.1| arginyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129] gi|81401545|sp|Q6NHU6|SYR_CORDI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|38199889|emb|CAE49555.1| arginyl-tRNA synthetase [Corynebacterium diphtheriae] Length = 550 Score = 566 bits (1458), Expect = e-159, Method: Composition-based stats. Identities = 186/583 (31%), Positives = 307/583 (52%), Gaps = 38/583 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD S +K ++ +++ +L +V+ERPR+ HG +TN A+ +++ +G++P Sbjct: 4 ADLSQLIKQTAIDVLSARELDTTVLPETVVVERPRNPEHGDYATNVALQIAKKVGMNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 + +++ + + +D IAG GFIN+ L+ + +I++ I+ +G +G + + +G +V Sbjct: 64 LGQVLADSLAANTAIDEASIAGPGFINIRLAAAAQGEIVAKILEAGATFGHSDLYQGRRV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++ SG +VTREYY ND G QI+ S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAQVTREYYFNDHGRQIDRFTNSLVA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+K + + ++ +L E + V+ M Sbjct: 184 SAK------GEPTPEDGYGGDYIKEIADAVVAQHPD-VLALAEADLNERFRATGVEMMFA 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I++ L D++ E+ + + I L G +Y Sbjct: 237 HIKESLHEFGTDFDVYFHENSLF--ESGAVDKAIQTLKDNGNLYFN-------------- 280 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 +S+ GDD DR ++KSDG Y A D+AY K++RG D IY++G+DH GY Sbjct: 281 --EGAWWLKSSEYGDDKDRVVIKSDGDAAYIAGDIAYVADKFDRGHDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL A AAA+ + + + VL+ ++V L RDG ++MSKRAG ITL +V+ +G D R Sbjct: 339 ISRLRAAAAAMGYEPSNVEVLIGQMVNLVRDGKAVRMSKRAGTVITLDDLVEAIGIDGAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF-PDLDFDLFPR 482 + M+ LD D ++QS +NPV+YVQY +AR SI R+A D+ +D DL Sbjct: 399 YSMIRSSVDSSLDIDLQLWEQQSSDNPVYYVQYGHARLCSIARKAADLGITAIDPDL--- 455 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 +++ + E D LI L E+P V++ A +EP+++A + DLA FH + + Sbjct: 456 SLLTHDREGD-----LIRTLGEFPAVVKAAAELREPHRIARFAEDLAGTFHRFYDSCQIL 510 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P+ V + + RL L +A ++ + L ++GV +P M Sbjct: 511 PK---VGESAEPIHTARLALANATRQVLANALRLVGVSAPERM 550 >gi|238927166|ref|ZP_04658926.1| arginine--tRNA ligase [Selenomonas flueggei ATCC 43531] gi|238884948|gb|EEQ48586.1| arginine--tRNA ligase [Selenomonas flueggei ATCC 43531] Length = 589 Score = 566 bits (1458), Expect = e-159, Method: Composition-based stats. Identities = 204/584 (34%), Positives = 296/584 (50%), Gaps = 35/584 (5%) Query: 3 LFADFSSRLKNYLKEIDCKIKV-EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 + L N +K ++ E L I++E P + G +TN AM +R P Sbjct: 40 IKQQIEQALINAVKAAVSAGELSEGGTLPPILLEEPPNKELGDFATNFAMQSARIFHQPP 99 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 IAE++ I +D +AG GF+N YL + L I+ +G YG Sbjct: 100 KKIAEILGTHI-TGSWLDHAEVAGPGFLNFYLKKDVIADTLRDILRTGENYGALPPKDLP 158 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 + +E+VSANPTGP+HVGH R A VG L L+ +GYEV EYY+NDAG Q++ LA+SV Sbjct: 159 PIQVEYVSANPTGPLHVGHGRGAAVGSALVKLLRTAGYEVQSEYYVNDAGKQMDLLAISV 218 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 RY + L PE Y G + + + D+ L EE+ L KD + + Sbjct: 219 NARYLERLGQKIV-FPENGYHGADIIDTAQRIIDRDGDRYLALSEEERLEKFKDIAYKEK 277 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 + ++R+DL + D + SE H P ++ ++D L +G YE Sbjct: 278 LAVLREDLADFRVTFDRWFSERTLH---PEAVQRVVDVLLERGTAYE------------- 321 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 + RST GDD DR + + +G TY AAD+AY KY RGF ++ + G+DH Sbjct: 322 ---KDGAVWLRSTDYGDDKDRVIFRDNGVPTYLAADIAYHDNKYARGFGRLVNIWGADHH 378 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 GYV R++A A+ Q+ VLL ++V LYRDG +K+SKR G+ +TLR +++EVG D+ Sbjct: 379 GYVARVKAAMEALGHDSKQLTVLLLQMVSLYRDGEVVKLSKRTGETVTLRELMEEVGVDA 438 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 R+ L R LDFD K++S ENPV+Y+QYA+AR SIFRQA ++ D P Sbjct: 439 ARYFFLMRSLDSQLDFDLDLAKKKSNENPVYYIQYAHARISSIFRQAAEMRID------P 492 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + D +E+ LI L YP IE A P ++A Y ++LA+ FH ++ R Sbjct: 493 AEGEKLDVLTDETEIALIKKLGAYPEEIERAASELAPQRIARYSHELAAAFHSFYNKCR- 551 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L RL LV A +I L I+GV +P +M Sbjct: 552 ------IVGQEPVLAAARLSLVLATGHVIRHSLGILGVSAPEKM 589 >gi|239636782|ref|ZP_04677784.1| arginyl-tRNA synthetase [Staphylococcus warneri L37603] gi|239598137|gb|EEQ80632.1| arginyl-tRNA synthetase [Staphylococcus warneri L37603] Length = 553 Score = 565 bits (1457), Expect = e-159, Method: Composition-based stats. Identities = 202/586 (34%), Positives = 317/586 (54%), Gaps = 34/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L ++ K ++ I I IE P+D +G STN AM+L++ + Sbjct: 1 MNIIEQVKQTLVEEIEASIKKAELANDI-PEIKIEIPKDVKNGDYSTNIAMVLTKIAKRN 59 Query: 61 PLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ IV + V IAG GFIN YL YL I+ + G ++G+ K Sbjct: 60 PREIAQAIVDHLDASKAHVKKVDIAGPGFINFYLDNQYLTDIIPEAIQKGDQFGKAEASK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 + +E+VSANPTG +H+GH R A VGDTLA+++ +GY VTREYYINDAG QI+ LA Sbjct: 120 NKNILLEYVSANPTGDLHIGHARNAAVGDTLANILIAAGYHVTREYYINDAGNQISNLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ R+ +AL +N ++PE Y G + +GK+LADK+ E+ ++ +++ L + V Sbjct: 180 SIETRFFEALGDNSYEMPEDGYNGKDIVEIGKDLADKH-PEIKDYSDDERLKTFRQLGVD 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M ++ DL N D + SE + + I++++ + GY YE Sbjct: 239 YEMSKLKKDLSDFNTHFDNWFSETSLY--EKGEIKEVLAKMNDLGYTYEA---------- 286 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 R++ DD DR L+K DG+YTYF D+AY K +RG D +I +MG+D Sbjct: 287 ------DGATWLRTSDFKDDKDRVLIKKDGNYTYFLPDIAYHFDKVQRGNDILIDLMGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A ++ + + ++VRL ++G +KMSKR G+ ITLR ++DEVG Sbjct: 341 HHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGV 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R DFD KEQS++NPV+Y QY +AR SI +QAK+ D+ D+ Sbjct: 401 DAARYFLTMRSPDTHFDFDMELAKEQSQDNPVYYAQYGHARICSILKQAKEQGIDISTDV 460 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + ++L+ +AE+ IE+A ++ P+++ Y+ DLAS FH ++ Sbjct: 461 DFSKI------TNEKAIELLKKVAEFEPTIESAADSRAPHRMTNYIQDLASHFHKFYNAE 514 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ + T + LV AV +N+ L ++GV +P M Sbjct: 515 K-------VLTDDIEKTKAHIALVEAVRITLNNALALVGVSAPETM 553 >gi|260886946|ref|ZP_05898209.1| arginine--tRNA ligase [Selenomonas sputigena ATCC 35185] gi|330839265|ref|YP_004413845.1| Arginyl-tRNA synthetase [Selenomonas sputigena ATCC 35185] gi|260863008|gb|EEX77508.1| arginine--tRNA ligase [Selenomonas sputigena ATCC 35185] gi|329747029|gb|AEC00386.1| Arginyl-tRNA synthetase [Selenomonas sputigena ATCC 35185] Length = 551 Score = 565 bits (1457), Expect = e-159, Method: Composition-based stats. Identities = 205/585 (35%), Positives = 303/585 (51%), Gaps = 34/585 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + S+ ++ ++ L I++E P D G +TN AM +R ++ Sbjct: 1 MDIKEQLSAAIRQAAEQAIADGVFPAGELADILLEVPPDKKFGDFATNFAMQSARVFRMN 60 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P IAE +V+RI+ D +D IAG GFIN YL + L +L I G Sbjct: 61 PKKIAEELVSRIEGD-WLDHAEIAGPGFINFYLKGNVLYDLLRHIYEGGEACFNLPQKDT 119 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 ++ +E+VSANPTG +HVGH R A VG L +L+ +GY V EYYINDAG QI+ LA S Sbjct: 120 ARIMVEYVSANPTGLLHVGHGRGAAVGSALVNLLRAAGYPVHSEYYINDAGNQIDNLAAS 179 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V RY + L ++ PE Y G + K + + + L+ EE+ L K+ +++ Sbjct: 180 VNARYLELL-GKETAFPENGYHGADIIDTAKRIVEADGEKYLSLSEEQRLAAFKEIALKE 238 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 + +++DL A N+ D + SE H P +RD L +G VY+ Sbjct: 239 KLAQLKEDLAAFNVTFDEWFSERTLH---PEAVRDACQTLKEKGKVYD------------ 283 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 L RST GDD DR +++ +G TY AAD+AY + K ERGF ++I + G+DH Sbjct: 284 ----KDGALWLRSTDYGDDKDRVVIRDNGVPTYLAADIAYHRNKLERGFGHLINIWGADH 339 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GYV R++A AA+ Q+ VLL ++V LYR G +KMSKR G+ +TL +++EVG+D Sbjct: 340 HGYVCRVKAALAALGYAPEQLEVLLLQMVSLYRGGELVKMSKRTGESVTLEELIEEVGTD 399 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 + R+ L R LDFD K S ENPV+Y+QYA+AR SIFRQA D + Sbjct: 400 AARYFFLMRSLDSQLDFDLDLAKSHSNENPVYYIQYAHARISSIFRQAADAGIE------ 453 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 D +E+ LI + EY IE A + P+++A + YD A +FH ++ R Sbjct: 454 TGGAPEFSRLIDETEIALIKKIEEYAEEIERAARERAPHRIARFAYDTAGLFHSFYNKCR 513 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L+ RL LV +++ L I+G+ +P +M Sbjct: 514 -------IVGVEPALSGARLALVAVARNVLRHALGILGISAPEKM 551 >gi|145222884|ref|YP_001133562.1| arginyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK] gi|189083540|sp|A4T8M4|SYR_MYCGI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|145215370|gb|ABP44774.1| arginyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK] Length = 550 Score = 565 bits (1457), Expect = e-159, Method: Composition-based stats. Identities = 193/582 (33%), Positives = 298/582 (51%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LK + + ++ L D + +ERPR+ HG +TN A+ L + +G +P Sbjct: 4 ADLAQLLKATAAAVLAEHGLDSAALPDTVTVERPRNPEHGDYATNLALQLGKKVGANPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + + + +AG GF+NL + S ++S+++ +G +YG + + G KV Sbjct: 64 LAGWLAEALAASDGIAAADVAGPGFVNLRIEASAQNVMVSNVLSAGADYGHSAVLAGKKV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L+ G VTREYY ND GAQI+ + S+ Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGAAVTREYYFNDHGAQIDRFSNSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + ++ K +L+ P+++ + V M Sbjct: 184 AAK------GEPAPEDGYAGTYIADIASQVVAKE-PGVLDQPDDRMRETFRAIGVNLMFD 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I++ L D++ ED H + ID L G+ YE Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMHT--SGRVEQAIDKLRETGFAYE--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 + R+T GDD DR ++KSDG Y A DLAYF K +RGFD IY++G+DH GY Sbjct: 280 -KDGAVWLRTTDFGDDKDRVVIKSDGKPAYIAGDLAYFLDKRKRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA+ + + VL+ ++V L RDG P++MSKRAG ITL +V+ +G D+ R Sbjct: 339 IARLKASAAALGDDPDTVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D S ENPV+YVQYA+AR ++ R A ++ D Sbjct: 399 YSLIRSSVDTPIDIDLELWSSASNENPVYYVQYAHARLSALARNAAELGIAPD------- 451 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + E LI ++ E+PR++ A +EP++++ YL DLA +H + R P Sbjct: 452 TAHLDLLTHDKEGVLIRNIGEFPRILATAAELREPHRVSRYLEDLAGDYHRFYDACRVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L RL L A +I +GL+I+GV +P M Sbjct: 512 QG---DEAPGDLHAARLALCAATRQVIANGLDILGVSAPERM 550 >gi|20808887|ref|NP_624058.1| arginyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4] gi|23822189|sp|Q8R786|SYR_THETN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|20517545|gb|AAM25662.1| Arginyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4] Length = 562 Score = 565 bits (1457), Expect = e-159, Method: Composition-based stats. Identities = 195/582 (33%), Positives = 319/582 (54%), Gaps = 32/582 (5%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 + + L E + + + + + +E P++ HG L+TN AM+++R + P IA Sbjct: 11 EIKDVVLKALNEAKKEGLLNFESIQDVEVEEPKEKQHGDLATNFAMVMAREAKMAPRKIA 70 Query: 66 ELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 E+I +++ + V +AG GFIN +L+ ++L + L I G +YGR +GKG KV Sbjct: 71 EIIASKMNTSGTFIEKVEVAGPGFINFFLNQNFLIETLKLIHKRGKDYGRVNLGKGKKVQ 130 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGPMH+G+ R +GD LAS++ ++GY V+RE+YINDAG QI S+ R Sbjct: 131 VEFVSANPTGPMHMGNARGGAIGDVLASILDYAGYNVSREFYINDAGNQIEKFGYSLEAR 190 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 Y Q L D+++PEG Y G + KE + + + + P E+ + +Y ++ ++ Sbjct: 191 YLQLL-GIDAEVPEGGYHGEDIIDRAKEFLEIHGDKYKDVPSEERRKALIEYGLKKNIEK 249 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 +++DL I++D++ SE + D + +I+ L +GY YE Sbjct: 250 MKEDLVLYGIEYDVWFSEQSLY--DSGEVYKVIEELTEKGYTYE---------------- 291 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGY 363 L F+ T+ G + D L++S+G TY A+D+AY K K+ RGFD +I V G+DH G+ Sbjct: 292 KDGALWFKMTLFGAEKDDVLVRSNGVPTYLASDIAYHKNKFVTRGFDWVINVWGADHHGH 351 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 V ++ A+ +++V+L +LV+L G ++MSKR G ITLR +++EVG D+ R Sbjct: 352 VAPMKGAMKALGIDPNRLDVVLMQLVKLIEGGQVVRMSKRTGKMITLRDLIEEVGKDAAR 411 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 F R ++FD K+Q+ ENPVFYVQYA+AR SI RQ +++ ++ Sbjct: 412 FFFNMRSPDSPIEFDLDLAKQQTNENPVFYVQYAHARICSIIRQLEEMGVKIE----NIE 467 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + + E+ LI LA +P I A P+++ Y+ D+AS+FH ++ R Sbjct: 468 DVDLGLLKEEEEVDLIKKLAYFPEEITIAAKTLAPHRITRYVIDVASLFHSFYNSHR--- 524 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V+ L R L+ AV +++ + L+I+ V +P M Sbjct: 525 ----VKGAEENLMKARFALILAVKTVLKNALDILKVTAPERM 562 >gi|323465238|gb|ADX77391.1| arginyl-tRNA synthetase [Staphylococcus pseudintermedius ED99] Length = 552 Score = 565 bits (1457), Expect = e-159, Method: Composition-based stats. Identities = 199/586 (33%), Positives = 314/586 (53%), Gaps = 35/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L +++ + + + I I IE P+D +G +TN AM+L++ Sbjct: 1 MNIIDQVKQTLIQEIEKSIQQANIVESI-PEIKIEIPKDTKNGDYATNIAMVLTKLAKRT 59 Query: 61 PLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+LIV + + + IAG GFIN YL SYL ++ + ++GR K Sbjct: 60 PREIAQLIVDHLDTEAAHVKKIDIAGPGFINFYLDSSYLNAVIDQALELDTQFGRVAESK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 K+ +E+VSANPTG +H+GH R A VGDTL +++ +GY+VTREYYINDAG QI LA Sbjct: 120 NKKILVEYVSANPTGDLHIGHARNAAVGDTLCNILDAAGYDVTREYYINDAGNQITNLAK 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ RY Q L +++P Y G +K++G +LA K L++ +++ L + V Sbjct: 180 SIEARYLQHL-GQKAEMPADGYHGQDIKNIGADLAKK-QPNLMDLSDDERLKTFRQLGVD 237 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M ++ DL NI D + SE + + I+ +++ + GY YE Sbjct: 238 YEMAKLKQDLADFNIHFDNWFSETSLY--EKGEIKAVLERMKENGYTYE----------- 284 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 R+T DD DR L+K DG+YTYF D+AY K++RG DN+I + G+D Sbjct: 285 -----QDGATWLRTTDFKDDKDRVLIKKDGTYTYFLPDIAYHYDKFQRGNDNLINLFGAD 339 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A ++ + + ++VRL +DG +KMSKR G+ ITLR ++DEVG Sbjct: 340 HHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQDGEEVKMSKRTGNAITLREIMDEVGI 399 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R DFD KEQS++NPV+Y QYA+AR SI RQA+ ++ Sbjct: 400 DAARYFLTMRSADTHFDFDMALAKEQSQDNPVYYAQYAHARICSILRQAEAQGYQVEKGA 459 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + + ++L+ +AE+ +IE A A+ P+++ Y+ DLA+ FH ++ Sbjct: 460 DYQTI------TNDKAIELLKKVAEFEPMIEGAAEARAPHRVTNYIQDLAAHFHKFYNAE 513 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ T L L+ AV + + L ++GV +P +M Sbjct: 514 K-------VLTEDQAKTKAHLALIDAVRITLRNALQLVGVTAPEQM 552 >gi|329734087|gb|EGG70406.1| arginine--tRNA ligase [Staphylococcus epidermidis VCU028] Length = 553 Score = 565 bits (1457), Expect = e-159, Method: Composition-based stats. Identities = 196/586 (33%), Positives = 309/586 (52%), Gaps = 34/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L ++ K + + I I IE P+D +G S+N AM+L++ + Sbjct: 1 MNIIDQVKQTLIEEIEASIRKANLTEDI-PEIKIEIPKDTKNGDYSSNIAMVLTKIAKRN 59 Query: 61 PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ IV + V IAG GFIN YL YL I+ + G +G K Sbjct: 60 PREIAQAIVDHLDTSKAHVKQVDIAGPGFINFYLDNQYLTDIIPEAITKGDRFGYATQSK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 T + +E+VSANPTG +H+GH R A VGD+LA+++ +GY VTREYYINDAG QI LA Sbjct: 120 NTNILLEYVSANPTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ RY +AL + ++P Y G + +GK+LA K+ E+ ++ +E+ L + V Sbjct: 180 SIEARYFEALGDTSYEMPADGYNGKDIIEIGKDLAVKH-PEIKDYSDEERLKTFRQLGVD 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M+ ++ DL N+ D + SE + + I++ + + GY YE Sbjct: 239 YEMEKLKKDLSDFNVHFDNWFSETSLY--ENGAIKNTLSKMKELGYTYEA---------- 286 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 R++ DD DR L+K DG+YTYF D AY K RG D +I +MG+D Sbjct: 287 ------DGATWLRTSEFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A ++ + + ++VRL ++G +KMSKR G+ ITLR ++DEVG Sbjct: 341 HHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGI 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R DFD KEQS++NP++Y QYA+AR SI +QAK+ ++ D Sbjct: 401 DAARYFLTMRSPDSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEQGIEVSTDA 460 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + + L+ +AE+ IE+A + P++L Y+ DLA+ FH ++ Sbjct: 461 DFSKI------NNDKAIDLLKKVAEFESTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAE 514 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ + T + ++ AV +++ L ++GV +P M Sbjct: 515 K-------VLTDDTEKTKAHVAMIEAVRITLHNALALVGVTAPESM 553 >gi|118468738|ref|YP_889211.1| arginyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155] gi|152031699|sp|Q9X5M0|SYR_MYCS2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|118170025|gb|ABK70921.1| arginyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155] Length = 550 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 193/582 (33%), Positives = 292/582 (50%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LK + + ++ L + +ERPR+ HG +TN A+ L + +G++P Sbjct: 4 ADLAELLKATAAAVLTEHDLDVAALPATVTVERPRNPEHGDYATNLALQLGKKVGVNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + + +AG GF+NL + S I+++++ + YG + G V Sbjct: 64 LAGWLATALTAADGIAVAEVAGPGFVNLRIEASAQGVIITNVLAAEGSYGSSDQYAGRNV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L+A G VTREYY ND GAQI+ S+ Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLATQGAAVTREYYFNDHGAQIDRFVNSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + +++ K +L PE++ + V M Sbjct: 184 SAK------GEPTPEDGYAGDYIVDIAQQVIAKAPD-VLGLPEDQQRETFRAIGVDLMFT 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L D++ ED H + I L G +YE Sbjct: 237 HIKQSLHDFGTDFDVYTHEDSMHT--SGRVDQAITQLREAGSIYE--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 + R+T GDD DR ++KSDG+ Y A DLAY+ K +RGFD IY++G+DH GY Sbjct: 280 -KDGAVWLRTTDFGDDKDRVVIKSDGNAAYIAGDLAYYLDKRKRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA+ + + VL+ ++V L RDG P++MSKRAG ITL +V+ +G D+ R Sbjct: 339 IARLKAAAAALGDDPDTVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D S ENPV+YVQYA+AR ++ R A D+ ++ D Sbjct: 399 YALIRSSVDTPIDIDLELWSSASNENPVYYVQYAHARLCALARNAADLGVSVNTDHLDL- 457 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 E LI +L E+PRV++ A +EP+++ YL DLA +H + R P Sbjct: 458 ------LTHEKEGALIRNLGEFPRVLKTAASLREPHRVCRYLEDLAGDYHRFYDSCRVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L RL L A +I +GL I+GV +P M Sbjct: 512 QG---DEEPGDLHSARLALCRATRQVIANGLAILGVSAPERM 550 >gi|307546356|ref|YP_003898835.1| arginyl-tRNA synthetase [Halomonas elongata DSM 2581] gi|307218380|emb|CBV43650.1| arginyl-tRNA synthetase [Halomonas elongata DSM 2581] Length = 561 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 204/586 (34%), Positives = 314/586 (53%), Gaps = 36/586 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 S L+ L+++ + + ++ I ++ +D AHG +TN A++L++P GL P +AE Sbjct: 5 IISLLERALEDLQRQAILPSELAPTIKVDPAKDKAHGDYATNLALMLAKPAGLKPRELAE 64 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 +VA + V V IAG GFIN + + +++ ++ G +GR+L G+G KV +E Sbjct: 65 KLVAALPDSEAVSKVEIAGPGFINFFAATDAAAQVVREVLDGGDAFGRSLTGQGQKVQVE 124 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+HVGH R A +GD L L+ +G++VTRE+Y NDAGAQI+ LALSV R Sbjct: 125 FVSANPTGPLHVGHGRGAAIGDCLCRLLEATGFDVTREFYYNDAGAQISNLALSVQAR-A 183 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGK-----ELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 + + D P Y G Y+ V K E + + L ++D++V + Sbjct: 184 KGVTPEDDAWPADGYRGDYITDVAKAYLAGETVHADDRHVTAKADPDDLDAIRDFAVAYL 243 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 + DL+A + D++ E +R + D LA QG+ YE Sbjct: 244 RREQDLDLRAFGVAFDVYFLESSLYR--DGKVADTAKRLAEQGHTYEH------------ 289 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 R+T GDD DR + K DG YTYF D+AY K++RGF +I G+DH Sbjct: 290 ----DGATWLRTTDFGDDKDRVMRKRDGDYTYFLPDVAYHLDKWQRGFTTVINEQGADHH 345 Query: 362 GYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 V R+ A A+ + + +L ++V + R G+ +K+SKRAG ++TLR ++DEVG Sbjct: 346 STVTRVRAGLQALGVGIPEGWPDYVLHQMVLVTRSGVEVKLSKRAGSYVTLRDLIDEVGR 405 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ RF + R+ L FD + QS +NPV+YVQYA+AR S+ R+A+ D +L Sbjct: 406 DATRFFLAARRADSQLTFDIDLARSQSNDNPVYYVQYAHARVCSMLRKAQADERPFDHEL 465 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 N+ ++E E L+ LA YP V+E A +A+EP ++A YL DLA+ FH ++ Sbjct: 466 AMDNLALLDTE---QEKALLNRLARYPEVVERAALAREPQQIAQYLQDLAAEFHTCYNAV 522 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V + RL L A ++ +GL+++GV +P EM Sbjct: 523 K-------VMVEDDARRNARLALGLAARQVLRNGLDLLGVSAPEEM 561 >gi|289551531|ref|YP_003472435.1| Arginyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] gi|289181062|gb|ADC88307.1| Arginyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01] Length = 555 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 201/587 (34%), Positives = 310/587 (52%), Gaps = 34/587 (5%) Query: 1 MYLFADFSSRLKNYLKE-IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + L N +K I ++ + + I IE P+D +G STN AM+L++ Sbjct: 1 MNIIEQVKQTLINEIKTSIKSAKLIQDQSIPEIKIEIPKDSKNGDYSTNIAMVLTKLAKR 60 Query: 60 DPLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +P IA+ IV V IAG GFIN YL YL I+ + G YG Sbjct: 61 NPREIAQAIVDHFDTTKAHVKQVDIAGPGFINFYLDNHYLTAIIPEAISKGAHYGYASEP 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 K ++ +E+VSANPTG +H+GH R A VGD+LA+++ +GY+VTREYYINDAG QI LA Sbjct: 121 KNKRILLEYVSANPTGDLHIGHARNAAVGDSLANILIAAGYDVTREYYINDAGNQITNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 S+ R+ +AL + +PE Y G + +GK+LA K+ E+ ++ + L + V Sbjct: 181 RSIETRFFEALGDTSHKMPEDGYNGKDIIEIGKDLAQKH-PEIKDYSDHDRLKTFRQLGV 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + M ++ DL N D + SE + D I + + + GY YE Sbjct: 240 EYEMVKLKRDLADFNAHFDSWFSETTLY--DNGAIENTLARMKENGYTYE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 R++ DD DR L+KSDGSYTYF D AY K RG D +I +MG+ Sbjct: 288 ------KDGATWLRTSDFKDDKDRVLIKSDGSYTYFTPDTAYHYDKINRGNDILIDLMGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A ++ + + ++VRL ++G +KMSKR G+ ITLR ++DEVG Sbjct: 342 DHHGYINRIKASLETFGVNSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ + R DFD KEQS++NP++Y QYA+AR SI +QA+ D+ D Sbjct: 402 VDAARYFLTMRSPDSHFDFDMELAKEQSQDNPIYYAQYAHARICSILKQARAQGIDITTD 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + + L+ +AE+ +VI+NA + P++L Y+ DLA+ FH ++ Sbjct: 462 ADFSLI------TNDKAIDLLKKVAEFEQVIDNAAEHRAPHRLTNYIQDLAAAFHKFYNA 515 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++++ T + L+ AV +++ L ++GV +P M Sbjct: 516 EK-------VLTDHQEKTKALVALIEAVRITLHNALTLVGVSAPESM 555 >gi|226360614|ref|YP_002778392.1| arginyl-tRNA synthetase [Rhodococcus opacus B4] gi|254782979|sp|C1AW17|SYR_RHOOB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|226239099|dbj|BAH49447.1| arginyl-tRNA synthetase [Rhodococcus opacus B4] Length = 550 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 187/582 (32%), Positives = 301/582 (51%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + L+ ++ + ++ +L + +ERPR+ HG +TN AM +++ +G +P Sbjct: 4 ADLAELLRGTAAKVLAERGLDVSVLPETLTVERPRNPEHGDYATNVAMQVAKKVGTNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + +DS IAG GF+N+ L+ I++ I+ +G +G G K+ Sbjct: 64 LAGWLADALTAAEGIDSADIAGPGFLNIRLAADAQGAIVAKILEAGAAFGAGHTLDGKKI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L +++ G VTREYY ND GAQI+ + S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRILSTQGAAVTREYYFNDHGAQIDRFSRSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + ++ + ++L+ P + + + V M Sbjct: 184 AAK------GEPAPEDGYAGAYIADIAAQVQQQ-RPDVLDLPAGEQQEVFRSIGVDLMFA 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L + D++ E+ + + ++ L G +++ Sbjct: 237 HIKRTLHEFGVDFDVYFHENSLF--ESGAVEKAVETLKDSGNLFQ--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 + +ST GDD DR ++KSDG+ Y A D+AYF+ K RGFD IY++G+DH GY Sbjct: 280 -EDGAWWLKSTDFGDDKDRVVIKSDGNAAYIAGDIAYFQDKRSRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA + + VL+ ++V L RDG+ +KMSKRAG ITL +V+ +G D+ R Sbjct: 339 IGRLKAAAAAFGDDPDTVEVLIGQMVNLVRDGVAVKMSKRAGTVITLDDLVEAIGVDASR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + M+ +D D ENPV+YVQYA+AR +I R A D+ + F Sbjct: 399 YAMIRSSVDSSIDIDLELWTSTGNENPVYYVQYAHARLSAIARNAADLGIAVTDPDFSLL 458 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + QE + LI L EYPRV+ +A +EP+++A YL +LA +H + R P Sbjct: 459 IAEQEGD-------LIRTLGEYPRVVTSAANLREPHRIARYLEELAGAYHRFYGACRILP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L + RL L A ++ +GL ++GV +P +M Sbjct: 512 QG---DEEVGPLHIARLALCDASRQVLANGLALLGVSAPEQM 550 >gi|225630185|ref|YP_002726976.1| arginyl-tRNA synthetase [Wolbachia sp. wRi] gi|225592166|gb|ACN95185.1| arginyl-tRNA synthetase [Wolbachia sp. wRi] Length = 568 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 260/586 (44%), Positives = 368/586 (62%), Gaps = 18/586 (3%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +F SS + + L E+ + + + I +E P + AHG + TN AM+L++ + Sbjct: 1 MNIFKRASSLILSKLNELKQRGIINTDTTNFI-VEPPSNRAHGDIYTNVAMVLAKHEKKN 59 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P+ IAE++ ++ +V V IAG GFIN++L IL I E+G IG Sbjct: 60 PIEIAEVLAKEFELFDEVAKVEIAGPGFINIHLKIKVWHGILKQINELKTEFGTLDIGNN 119 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +N+EFVSANPTGP+H+GH R AV GD LA+L+ GY+VT+EYYINDAGAQI+TL S Sbjct: 120 QAINVEFVSANPTGPLHIGHARGAVFGDVLANLLKKVGYKVTKEYYINDAGAQIDTLIKS 179 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V+ RY++AL + +G YPG YLK +G+ LA KY E L + + I+++Y++ Sbjct: 180 VYLRYKEAL-GEKISIEKGLYPGEYLKPIGEGLAKKYGKEFLKKQDNQ---IIREYTLSF 235 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 ++++I++D+ L + HD+F SE + + I + I L+ +G VYEG L PK K ++ Sbjct: 236 ILELIKEDMNLLGVNHDVFTSEYELQK--SGKIEESIKILSDKGLVYEGYLEKPKGKESE 293 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 RK++LFRST GDDVDR L K GS+TYFA+D+AY K RGF+NMI +GSDH Sbjct: 294 NWT-SRKEMLFRSTKFGDDVDRALKKDGGSWTYFASDIAYHFDKISRGFNNMIVELGSDH 352 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GYVKRL+AV +A+S+ +A+I V L +V + +G P+KMSKR+G+F+T R VV+EVG D Sbjct: 353 GGYVKRLKAVVSALSDDQAKIEVKLHNIVNFFENGKPVKMSKRSGNFLTARDVVEEVGRD 412 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 RF+ML RKN +LDFDF KVKEQSK+NP+FYVQYA+AR S+ R A P D L Sbjct: 413 ITRFIMLTRKNDMVLDFDFAKVKEQSKDNPIFYVQYAHARAHSLMRNAPKELPTADPSLL 472 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 EL LI LA++P V+E A EP+++ FYL ++A FH W +G+ Sbjct: 473 RTGG----------ELFLIKTLAKWPDVVEIAARLCEPHRITFYLLEVAEAFHVLWGYGK 522 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586 + +RF+ +N LT R+ LV A+A +I SGL+I +E EMS Sbjct: 523 SDLNMRFILEDNLNLTAARMFLVQALAHVIASGLSIFNIEPLKEMS 568 >gi|317052384|ref|YP_004113500.1| arginyl-tRNA synthetase [Desulfurispirillum indicum S5] gi|316947468|gb|ADU66944.1| arginyl-tRNA synthetase [Desulfurispirillum indicum S5] Length = 556 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 204/584 (34%), Positives = 327/584 (55%), Gaps = 37/584 (6%) Query: 7 FSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 + ++N +++ + + E + L I+IE P++ + G + AM L++ +G P Sbjct: 5 IAECVRNAIEQAIQRGTLSLPEGQGLPEIIIENPKEKSFGDFACTIAMPLAKIMGQPPRA 64 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 IA+ I+A + ++ V IAG GF+N ++ P+ ++L +I+ G +YGR+ +G+ +V Sbjct: 65 IAQAIMAHL-SHSAIEKVEIAGPGFMNFFVRPAASLEVLKTILREGEQYGRSAVGQNRRV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EFVSANPTGP+H+GH R A VGD +A ++ ++GY V REYYINDAG Q+N L LS + Sbjct: 124 MVEFVSANPTGPLHIGHGRGAAVGDAIARILEYAGYNVHREYYINDAGNQMNNLGLSTYI 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 RY Q L + + L E Y G Y+ + +++ KY + + +P + +++ Sbjct: 184 RYMQLLGHEEMTLEESCYQGDYITDIARDVLTKYGRKF--EGDRSSIPFFTTLTGDVILQ 241 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+DDL+ + D + SE D H + + +D L G YE Sbjct: 242 GIKDDLQRFRVSFDHYFSEKDLH--EQGHVSRELDQLQTAGKAYE--------------- 284 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 + L R+T GDD DR + + +G TYFAAD+AY + K++RGFD +I + G+DH GY Sbjct: 285 -EGDALWVRTTAFGDDKDRVVRRGNGETTYFAADIAYHRNKFQRGFDTLIDIWGADHHGY 343 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 V RL+A + + V+L +LV L R G+P+ MS R+G+F LR V+DEVG+D+ R Sbjct: 344 VNRLKAAVNLLDRNPDDLEVILIQLVSLQRAGVPVAMSTRSGEFDALRDVLDEVGTDAAR 403 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR--QAKDIFPDLDFDLFP 481 + L R+ LDFD K+Q+ +NPVFYVQY +ARC SI +A D +P + D Sbjct: 404 YFFLMRRCDSHLDFDLELAKQQTNDNPVFYVQYCHARCCSIIEQLKANDKYPQQNLDAID 463 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 +V+ E E L L + V+E A +A+EP+++ YL ++AS FH ++ Sbjct: 464 FSVMDTEQ-----EKDLAKVLGRFTEVVEGAALAREPHRIPHYLNEVASAFHSFYN---- 514 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R + A ++L R +V A I+ +GL++IG+++P M Sbjct: 515 --VCRVMNAPTQELLTARTIMVEATRQIVCNGLHVIGIDAPQRM 556 >gi|27467298|ref|NP_763935.1| arginyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228] gi|251810035|ref|ZP_04824508.1| arginyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060] gi|282874930|ref|ZP_06283805.1| arginine--tRNA ligase [Staphylococcus epidermidis SK135] gi|38258364|sp|Q8CTN9|SYR_STAES RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|27314841|gb|AAO03977.1|AE016745_76 arginyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228] gi|251806379|gb|EES59036.1| arginyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060] gi|281296258|gb|EFA88777.1| arginine--tRNA ligase [Staphylococcus epidermidis SK135] Length = 553 Score = 565 bits (1456), Expect = e-159, Method: Composition-based stats. Identities = 196/586 (33%), Positives = 309/586 (52%), Gaps = 34/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L ++ K + + I I IE P+D +G S+N AM+L++ + Sbjct: 1 MNIIDQVKQTLIEEIEASIRKANLAEDI-PEIKIEIPKDTKNGDYSSNIAMVLTKIAKRN 59 Query: 61 PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ IV + V IAG GFIN YL YL I+ + G +G K Sbjct: 60 PREIAQAIVDHLDTSKAHVKQVDIAGPGFINFYLDNQYLTDIIPEAITKGDRFGYATQSK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 T + +E+VSANPTG +H+GH R A VGD+LA+++ +GY VTREYYINDAG QI LA Sbjct: 120 NTNILLEYVSANPTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ RY +AL + ++P Y G + +GK+LA K+ E+ ++ +E+ L + V Sbjct: 180 SIEARYFEALGDTSYEMPADGYNGKDIIEIGKDLAVKH-PEIKDYSDEERLKTFRQLGVD 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M+ ++ DL N+ D + SE + + I++ + + GY YE Sbjct: 239 YEMEKLKKDLSDFNVHFDNWFSETSLY--ENGAIKNTLSKMKELGYTYEA---------- 286 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 R++ DD DR L+K DG+YTYF D AY K RG D +I +MG+D Sbjct: 287 ------DGATWLRTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A ++ + + ++VRL ++G +KMSKR G+ ITLR ++DEVG Sbjct: 341 HHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGI 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R DFD KEQS++NP++Y QYA+AR SI +QAK+ ++ D Sbjct: 401 DAARYFLTMRSPDSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEQGIEVSTDA 460 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + + L+ +AE+ IE+A + P++L Y+ DLA+ FH ++ Sbjct: 461 DFSKI------NNDKAIDLLKKVAEFESTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAE 514 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ + T + ++ AV +++ L ++GV +P M Sbjct: 515 K-------VLTDDTEKTKAHVAMIEAVRITLHNALALVGVTAPESM 553 >gi|92112735|ref|YP_572663.1| arginyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043] gi|123265793|sp|Q1QZZ4|SYR_CHRSD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|91795825|gb|ABE57964.1| arginyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043] Length = 561 Score = 564 bits (1455), Expect = e-159, Method: Composition-based stats. Identities = 201/586 (34%), Positives = 312/586 (53%), Gaps = 36/586 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 L+ ++ + + + +E +D AHG ++N A+ L++P G P +AE Sbjct: 5 IIELLEAAGTQLKQQGILPADAPLTVKVEPTKDKAHGDYASNLALTLAKPAGRKPRDLAE 64 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 +VA + + V IAG GFIN + + +++ +I+ +G +GR+L G G KV +E Sbjct: 65 ALVAALPPSDAIRQVDIAGPGFINFFAATDAAAQVVPAILDAGDTFGRSLSGAGEKVQVE 124 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+HVGH R A +GD L L+ +G+EVTRE+Y NDAGAQI LALSV R Sbjct: 125 FVSANPTGPLHVGHGRGAAIGDCLCRLLEATGFEVTREFYYNDAGAQIQNLALSVQAR-V 183 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGK-----ELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 Q L +D+ PE Y G Y+ V + E ++ L ++D++V + Sbjct: 184 QGLTPDDAAWPEDGYRGAYINDVAQAYLAGETVVADDRDVTASAAPDDLDAIRDFAVAYL 243 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 + DLKA + D++ E + D + + L G+ YE Sbjct: 244 RREQDLDLKAFGVAFDVYFLESSLY--DDGKVDATVKALVEGGHTYE------------- 288 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 + R+T GDD DR + K DG YTYF D+AY K++RGF +I G+DH Sbjct: 289 ---EDGATWLRTTDFGDDKDRVMRKKDGGYTYFLPDVAYHLDKWQRGFTTVINEQGADHH 345 Query: 362 GYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 V R+ A A+ + + +L ++V + R G+ +K+SKRAG ++TLR ++DEVG Sbjct: 346 STVTRVRAGLQALEAGIPQGWPDYVLHQMVLVTRSGVEVKLSKRAGSYVTLRDLIDEVGR 405 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ RF + R++ L FD + QS +NPV+Y+QYA+AR S+ R+A+D D DL Sbjct: 406 DATRFFLAARRSDSQLTFDIDLARSQSNDNPVYYIQYAHARVCSVMRRAQDAGKAFDRDL 465 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 +++ ++ E +L+ LA YP V+E A +EP ++A YL DLA+ FH ++ Sbjct: 466 AMQHLGRLDA---PQEKELMNRLARYPEVVERAARMREPQQVAQYLMDLAADFHTCYNAV 522 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V + +L RL L A +I +GL+++GV +P EM Sbjct: 523 K-------VMVEDDELRNARLALGLATRQVIRNGLDLMGVSAPEEM 561 >gi|15603944|ref|NP_220459.1| arginyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E] gi|6226193|sp|Q9ZE81|SYR_RICPR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|3860635|emb|CAA14536.1| ARGINYL-TRNA SYNTHETASE (argS) [Rickettsia prowazekii] gi|292571662|gb|ADE29577.1| Arginyl-tRNA synthetase [Rickettsia prowazekii Rp22] Length = 576 Score = 564 bits (1455), Expect = e-159, Method: Composition-based stats. Identities = 245/585 (41%), Positives = 362/585 (61%), Gaps = 9/585 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +F ++LK + K+ K+I + IE P+D +G LS+N AMI++ + Sbjct: 1 MNIF----NQLKQDIIAASQKLYNNKEIANTATIETPKDSFNGDLSSNIAMIIASKESIA 56 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A + P + S+ IAG GFIN + + + I+ ++ I K Sbjct: 57 PREVALKFKEVLVTLPYIASIEIAGPGFINFTIKAESWQAAIKDILQHEEKFFEIDIDKN 116 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 + +NIE+VSANPTGPMH+GH R AV GD LA ++ GY VT+EYY+NDAG+QIN L + Sbjct: 117 SNINIEYVSANPTGPMHIGHARGAVYGDVLARILQKVGYSVTKEYYVNDAGSQINDLVST 176 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V RY++AL +P G YPG YL +G+ L+ +Y ++LL + + I+K ++V+ Sbjct: 177 VLLRYKEAL-GEPITIPVGLYPGEYLIPLGEILSKEYGNKLLTMNDVERFKIIKSFAVEK 235 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 M+ + R DL L I+HD+F SE + D I + L R G +YEG LP PK K + Sbjct: 236 MLDLNRKDLADLGIKHDVFFSEQSLY--DKGEIEKTVKLLERMGLIYEGTLPAPKGKVHE 293 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + R Q LF+ST GD DRP+ K+DGS++YFA+DLAY K K +RG +++IYV+G+DH Sbjct: 294 DWEY-RVQKLFKSTNYGDSQDRPIEKADGSWSYFASDLAYAKDKIDRGANHLIYVLGADH 352 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 SGYVKR+EA+ A+ ++K +++V +C+LV +G+PIKMSKR G F +++ V EVG D Sbjct: 353 SGYVKRIEAIVKALGQEKVKVDVKICQLVNFVENGVPIKMSKRLGSFASVQDVNKEVGKD 412 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +RFMML R+N + LDFD KVKEQS+ENP+FYVQYA+ R +SI +A+++ P+ ++ F Sbjct: 413 IIRFMMLTRQNDKPLDFDLVKVKEQSRENPIFYVQYAHVRTKSILSKARELMPEA-YNSF 471 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 E+++I LA + + +E + EP+++AFYL +LAS FH W+ G+ Sbjct: 472 KEGKYNLSLLSSEEEIEIIKLLAAWTKTLEASVKYFEPHRIAFYLINLASKFHSMWNFGK 531 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 EN RF+ NN++LT+ RL L + II SGL +IGVE M Sbjct: 532 ENSDYRFIIENNKELTLARLALASVIQKIIASGLEVIGVEPMVTM 576 >gi|296170233|ref|ZP_06851826.1| arginine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895109|gb|EFG74827.1| arginine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 550 Score = 564 bits (1455), Expect = e-158, Method: Composition-based stats. Identities = 195/582 (33%), Positives = 293/582 (50%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + L+ + + ++ L + +ERPR+ HG ++N A+ L + +G++P Sbjct: 4 ADLAELLRTTASAVLAEHSLDAAALPATVTVERPRNPEHGDYASNLALQLGKKVGVNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + A + V S +AG GFINL L S KI++++V +G +G + G K+ Sbjct: 64 LAGWLAAAVSQADGVASAEVAGPGFINLRLEASAQAKIVNAVVDAGDGFGHSDALAGHKI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L++ G V REYY ND GAQI+ A S+ Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGAAVEREYYFNDHGAQIDRFASSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + ++ K L+ PE + + V M Sbjct: 184 AAK------GEATPEDGYAGAYINDIAAQVLAKAPDA-LSLPEAEMRETFRAIGVDLMFT 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I++ L D++ ED H + I L G +YE Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMHT--SGRVDQAIARLRETGNIYE--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 R++ GDD DR ++KSDG Y A D+AY+ K +RGFD IY++G+DH GY Sbjct: 280 -KDGASWLRTSAFGDDKDRVVIKSDGKPAYIAGDIAYYLDKRQRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+AVAAA + A + VL+ ++V L RDG P++MSKRAG ITL +V+ +G D+ R Sbjct: 339 IARLKAVAAAFGDDPAHVEVLIGQMVNLVRDGAPVRMSKRAGTVITLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D S ENPV+YVQYA+AR ++ R A ++ D Sbjct: 399 YSLIRSSVDTPIDIDLALWSSASNENPVYYVQYAHARLSALARNAAELGVVPDTGHL--- 455 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 E E L+ + E+PRV++ A +EP+++ YL DLA +H + R P Sbjct: 456 ----ELLSHDKEGTLLRSIGEFPRVLKTAASLREPHRVCRYLEDLAGDYHRFYDSCRVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L RL L A +I +GL I+GV +P M Sbjct: 512 QG---DERPTDLHAARLALCEATRQVIANGLTILGVTAPERM 550 >gi|309775278|ref|ZP_07670287.1| arginine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53] gi|308916941|gb|EFP62672.1| arginine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53] Length = 547 Score = 564 bits (1454), Expect = e-158, Method: Composition-based stats. Identities = 208/586 (35%), Positives = 312/586 (53%), Gaps = 40/586 (6%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + LK LK K + IVIE P+D +HG STN AM L+R L + Sbjct: 1 MN---QIENNLKQALKNAVQKAFDTELDTASIVIEIPKDKSHGDYSTNVAMQLTRMLKNN 57 Query: 61 PLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE +V + D D++ IAG GFIN + + L +I++ ++ YG N G+ Sbjct: 58 PRKIAEAVVEALDKDAADIERCEIAGPGFINFTIKNTSLAQIITRVLHEQDSYGHNNDGE 117 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTG +H+GH R A GD++ LM SGY+V REYY+NDAG QI L Sbjct: 118 GLKVNVEYVSANPTGDLHLGHARGAAWGDSITRLMKASGYDVCREYYVNDAGNQIVNLGK 177 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ RY++ L D DLPE Y G +K++ +AD+Y + + + L K+ + Sbjct: 178 SLQARYREHL-GLDFDLPEDGYHGEDVKNIAIAIADEYKDAYVEYND-ANLKFFKEKGIA 235 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 + IR DL + D++ SE D + +D L +G YE Sbjct: 236 FELDKIRRDLDNFRVHFDVWSSEQSI--RDAGKVEKALDVLHEKGLTYE----------- 282 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + L F +T GDD DR L K DGSYTY D+AY K K +RGFD ++ ++G+D Sbjct: 283 -----EDGALWFATTKFGDDKDRVLRKKDGSYTYLVPDIAYHKDKLDRGFDMLVDLLGAD 337 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A A+ ++ V + ++VRL +G +KMSKR G+ +T+R + +EVG Sbjct: 338 HHGYIPRLKASIEALGNNPDKLQVDIIQMVRLVENGEEVKMSKRLGNAVTIRELCEEVGV 397 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+VR+ + R LDFD ++QS +NPV+Y QYA+AR SI RQA +I F+L Sbjct: 398 DAVRYFFVQRAVDTHLDFDLGLARKQSNDNPVYYAQYAHARICSILRQASEIAEAQSFEL 457 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 E+ L+ ++ E+ V+ +A ++ P+K+ Y+ LA FH ++ Sbjct: 458 LT----------HEKEIALMKYINEFTNVVSDAARSRAPHKVCNYIQKLAQHFHSFYNVC 507 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + N +L+ RL L+ A + + L +IGV++ +M Sbjct: 508 KVN------DPQQPELSSQRLALLKATKITLKNALYLIGVDAIEKM 547 >gi|118619176|ref|YP_907508.1| arginyl-tRNA synthetase [Mycobacterium ulcerans Agy99] gi|166232812|sp|A0PUL8|SYR_MYCUA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|118571286|gb|ABL06037.1| arginyl-tRNA synthetase ArgS [Mycobacterium ulcerans Agy99] Length = 550 Score = 564 bits (1454), Expect = e-158, Method: Composition-based stats. Identities = 194/582 (33%), Positives = 293/582 (50%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LK + + ++ L + +V+ERPR+ HG ++N A+ L++ +G +P Sbjct: 4 ADLAELLKTTATAVLSEHALDTSALPQTVVVERPRNPEHGDYASNVALQLAKKVGANPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A IV + + S +AG GFINL L S KI+++I+ +G +G + + KV Sbjct: 64 LAGWIVEALTKADGIASAEVAGPGFINLRLETSAQAKIVNAIIDAGSGFGHSELMAAHKV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L++ G +V REYY ND GAQI+ A S+ Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGADVVREYYFNDHGAQIDRFANSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + P+ Y G Y+ + + K L+ P+ + ++ V M Sbjct: 184 AAK------GEPTPDDGYAGSYINDIAARVLQKAPDA-LSLPDAQMHETFREIGVDLMFS 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I++ L D++ ED H + + L G +YE Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMH--STGRVDQAVARLRETGNIYE--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 RS+ GDD DR ++KSD Y A DLAY+ K ERGFD IY++G+DH GY Sbjct: 280 -KDGATWLRSSSFGDDKDRVVIKSDDKPAYIAGDLAYYLDKRERGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA E + VL+ ++V L RDG P++MSKR G ITL +V+ +G D+ R Sbjct: 339 IARLKAAAAAFGEDPGTVEVLIGQMVNLVRDGQPVRMSKRTGTVITLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D S ENPV+YVQYA+AR ++ R A ++ D D Sbjct: 399 YSLIRSSVDTPIDIDLALWSSASNENPVYYVQYAHARLSALARNAAELGLIPDTDHL--- 455 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 E E L+ L ++PR+++ A +EP+++ YL DLA +H + R P Sbjct: 456 ----ELLSHEKEGVLLRTLGDFPRMLKAAASLREPHRVCRYLEDLAGDYHRFYDSCRVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +L RL L A I +GL I+GV +P M Sbjct: 512 QG---DEEPTQLHTARLALCQATRQAIANGLGILGVTAPERM 550 >gi|228475105|ref|ZP_04059832.1| arginine--tRNA ligase [Staphylococcus hominis SK119] gi|314937074|ref|ZP_07844421.1| arginine--tRNA ligase [Staphylococcus hominis subsp. hominis C80] gi|228270869|gb|EEK12266.1| arginine--tRNA ligase [Staphylococcus hominis SK119] gi|313655693|gb|EFS19438.1| arginine--tRNA ligase [Staphylococcus hominis subsp. hominis C80] Length = 553 Score = 564 bits (1454), Expect = e-158, Method: Composition-based stats. Identities = 197/586 (33%), Positives = 314/586 (53%), Gaps = 34/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L ++ K + + I I +E P+D +G STN AM+L++ + Sbjct: 1 MNIIEKVKKTLIQEIEASIKKANLAEDI-PEIKVEIPKDTKNGDYSTNIAMVLTKIAKRN 59 Query: 61 PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ IV + V IAG GFIN YL YL ++S + G ++G K Sbjct: 60 PRDIAQAIVDNLDTSKANVKQVDIAGPGFINFYLDNQYLTAVISEAIQKGDKFGYAEEPK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 K+ +E+VSANPTG +H+GH R A VGD+LA+++ +GY+VTREYYINDAG QI LA Sbjct: 120 NKKILLEYVSANPTGDLHIGHARNAAVGDSLANILIAAGYDVTREYYINDAGNQITNLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ R+ +AL + ++P Y G + +GK+LA K+ E+ ++ +E+ L + V Sbjct: 180 SIETRFFEALGDTSHEMPADGYNGKDIVEIGKDLAKKH-PEMKDYSDEERLKTFRQLGVD 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M ++ DL N+ D + SE + + I + ++ + GY YE Sbjct: 239 YEMDKLKKDLSDFNVHFDNWFSETSLY--ENGAIDNTLEKMHELGYTYEA---------- 286 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 R++ DD DR L+K DG+YTYF D AY K RG D +I +MG+D Sbjct: 287 ------DGATWLRTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A ++ + + ++VRL ++G +KMSKR G+ ITLR ++DEVG Sbjct: 341 HHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGI 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R DFD KEQS++NP++Y QYA+AR SI +QAK+ ++D + Sbjct: 401 DAARYFLTMRSPDSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEKGIEIDKNA 460 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + + L+ +AE+ IE+A ++ P++L Y+ DLAS FH ++ Sbjct: 461 DFSTI------TNEKAIDLLKKVAEFEPTIESAAESRAPHRLTNYIQDLASAFHKFYNAE 514 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V +++ + T + L+ AV +++ L ++GV +P M Sbjct: 515 K-------VLSDDIEKTKAHVALIEAVKITLHNALALVGVSAPESM 553 >gi|260655517|ref|ZP_05861005.1| arginine--tRNA ligase [Jonquetella anthropi E3_33 E1] gi|260629965|gb|EEX48159.1| arginine--tRNA ligase [Jonquetella anthropi E3_33 E1] Length = 561 Score = 564 bits (1454), Expect = e-158, Method: Composition-based stats. Identities = 200/590 (33%), Positives = 314/590 (53%), Gaps = 34/590 (5%) Query: 1 MY-LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M A + + L +I + ++ R+ ERP+D +HG +TN AM ++ LG Sbjct: 1 MNESLAALQTSVTAALAKIAQEKGIQLPETCRVEFERPKDESHGDWATNVAMKCAKILGT 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +AE + + I + S+ +AG GFIN LS ++ +++ I +G YG++ +G Sbjct: 61 RPRDLAERLTSLIDDSKHIASMEVAGPGFINFRLSNQWMDDLVARIAENGENYGKSSVGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G V +EFVSANPTGP+HVGH R A VGD + +++AF+G++V +EYY+NDAG QIN LA Sbjct: 121 GRSVQVEFVSANPTGPLHVGHGRGAAVGDVVGNILAFAGWKVEKEYYVNDAGLQINILAK 180 Query: 180 SVFWRYQQALYNND----SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235 S+ RY + + D P Y G Y+ + + + ++ +N +++ L ++ Sbjct: 181 SILARYFELQGCPEKLPFDDAPGAMYKGAYIYDEARRVIEAVGNKFVNSSQDEALAYLRQ 240 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 + Q +++ I+ DL ++ + F SE + + +R ++ L GYVYE Sbjct: 241 FGAQHILENIKSDLARFGVKFNQFFSEKSLY--ERDLVRKAVETLREAGYVYE------- 291 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 L +RST GDD DR L +S G TYFA+D+AY K K++RGFD +I V Sbjct: 292 ---------KDGALWYRSTDFGDDKDRVLFRSTGEPTYFASDVAYHKEKFDRGFDRVIDV 342 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 G DH GYV R+ A + + NVLL + V L +DG + MS R G F TL ++D Sbjct: 343 WGCDHHGYVPRINAALRGLGKDAGDFNVLLIQFVNLVKDGQIVGMSTRGGKFETLASLLD 402 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 EVG D+ R+ L R++ LDFD + K +S +NPV+YVQYAYAR S+ R+A++ D+ Sbjct: 403 EVGVDAARYYFLMRRSDSQLDFDMDQAKRESSDNPVYYVQYAYARIASLTRKAQEKNIDM 462 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 L + E +L+ L +P +E A EP+ L Y+++L+ FH Sbjct: 463 TKPLPFDGRL----MTSPEEKRLLTALETFPGELERAAAGLEPHLLVTYVHELSGHFHAF 518 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ R + + L L LV AV +++ + I+G +P M Sbjct: 519 YNSCR-------ILDEDEPLRSSHLALVQAVRTVLKNCFGILGFSAPERM 561 >gi|225022821|ref|ZP_03712013.1| hypothetical protein CORMATOL_02866 [Corynebacterium matruchotii ATCC 33806] gi|224944428|gb|EEG25637.1| hypothetical protein CORMATOL_02866 [Corynebacterium matruchotii ATCC 33806] Length = 550 Score = 564 bits (1453), Expect = e-158, Method: Composition-based stats. Identities = 189/582 (32%), Positives = 299/582 (51%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 +D SS + +I +++ IL +++V+ERPR+ HG +TN A+ +++ +G++P Sbjct: 4 SDLSSLINTEAHKILADRQLDVTILPEQVVVERPRNPEHGDYATNLALQIAKKVGMNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A L+V + ++ +V IAG GFIN+ L+ + +I++ I+V+G YG N + G ++ Sbjct: 64 LASLLVDALSAHDEIATVDIAGPGFINIRLAAAAQGQIVADILVAGTTYGHNSLYSGERI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++A G +VTREYY ND G QI+ S+ Sbjct: 124 NLEFVSANPTGPVHLGSTRWAAVGDSLGRILAACGADVTREYYFNDHGRQIDRFTNSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + +PE Y G Y+ + + + +L E + V+ M Sbjct: 184 AAK------GQPVPEDGYGGDYITEIAANIVAQE-PGVLQQSEPDMRETFRALGVELMFD 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L + D++ E+ + + +D L G +Y Sbjct: 237 HIKTTLHEFGVDFDVYFHENSLF--ESGAVDRAVDKLKENGNLY---------------- 278 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 RST GDD DR ++KSDG Y A D+AY K+ERG IY++G+DH GY Sbjct: 279 FSNGAWWLRSTNYGDDKDRVVIKSDGDAAYIAGDIAYVANKFERGHTRSIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL A AAA+ + VL+ +LV L RDG ++MSKRAG ITL +V+ +G D+ R Sbjct: 339 ISRLRAAAAAMGYNPNNVEVLIGQLVNLVRDGEAVRMSKRAGTIITLDDLVEAIGIDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ LD D QS ENPV+YVQYA+AR S+ ++A + Sbjct: 399 YSLVRSSVDSTLDIDLTLWANQSNENPVYYVQYAHARLCSLAKKAAAVGVTASKPDLSL- 457 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + E LI L EYP V++ A +EP+++A Y+ +LA FH + + P Sbjct: 458 ------LTEDHEGTLIRTLGEYPTVVKAAAELREPHRIARYIEELAGTFHRFYDTCQILP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + RL L A +I + L ++GV +P +M Sbjct: 512 K---AGEQAQPIHTARLALATATRQVIANALGLLGVTAPEQM 550 >gi|326902914|gb|EGE49847.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis W-148] Length = 550 Score = 564 bits (1453), Expect = e-158, Method: Composition-based stats. Identities = 196/582 (33%), Positives = 297/582 (51%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LK + + ++ L + + +ERPR HG ++N AM L++ +G +P Sbjct: 4 ADLAELLKATAAAVLAERGLDASALPQMVTVERPRIPEHGDYASNLAMQLAKKVGTNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + + S +AG GFIN+ L + K+++S++ +G YG +L+ G KV Sbjct: 64 LAGWLAEALTKVDGIASAEVAGPGFINMRLETAAQAKVVTSVIDAGHSYGHSLLLTGRKV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L+ G +V REYY ND GAQI+ A S+ Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGADVVREYYFNDHGAQIDRFANSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + P+ Y G Y+ ++ +++ K L+ P+ + + V M Sbjct: 184 AAK------GEPTPQDGYAGSYITNIAEQVLQKAPDA-LSLPDAELRETFRAIGVDLMFD 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L D++ ED H G + + I L G +YE Sbjct: 237 HIKQSLHEFGTDFDVYTHEDSMHTG--GRVENAIARLRETGNIYE--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 R++ GDD DR ++KSDG Y A DLAY+ K +RGFD IY++G+DH GY Sbjct: 280 -KDGATWLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA + A + VL+ ++V L RDG P++MSKRAG +TL +V+ +G D+ R Sbjct: 339 IARLKAAAAAFGDDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D S ENPV+YVQYA+AR ++ R A ++ D + Sbjct: 399 YSLIRSSVDTAIDIDLALWSSASNENPVYYVQYAHARLSALARNAAELALIPDTNHL--- 455 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 E E L+ L E+PRV+E A +EP+++ YL DLA +H + R P Sbjct: 456 ----ELLNHDKEGTLLRTLGEFPRVLETAASLREPHRVCRYLEDLAGDYHRFYDSCRVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L RL L A +I +GL IIGV +P M Sbjct: 512 QG---DEQPTDLHTARLALCQATRQVIANGLAIIGVTAPERM 550 >gi|227832873|ref|YP_002834580.1| Arginyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975] gi|262182639|ref|ZP_06042060.1| arginyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975] gi|254782956|sp|C3PFN8|SYR_CORA7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|227453889|gb|ACP32642.1| Arginyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975] Length = 553 Score = 564 bits (1453), Expect = e-158, Method: Composition-based stats. Identities = 185/581 (31%), Positives = 298/581 (51%), Gaps = 33/581 (5%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 D S +KN + + +++ +L + +ERPR+ HG +TN A+ +++ G P + Sbjct: 5 DLSVLIKNTAAAVLTEHELDASVLPETVTVERPRNPEHGDYATNLALQVAKKAGAQPREL 64 Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 A+ + + + +D IAG GF+N+ L+ + I++ ++ +G ++G N +G K+N Sbjct: 65 AQWLADALAGNDAIDEASIAGPGFLNIRLAAAAQGAIVAQVLNAGADFGSNTTYQGKKIN 124 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGP+H+G R A VGD+L ++ SG EVTREYY ND G QI+ A S+ Sbjct: 125 LEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAEVTREYYFNDHGGQIDRFARSLVAA 184 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 + PE Y G Y+K + + + ++ + L+ + + + V+ M Sbjct: 185 AK------GEPTPEDGYGGGYIKEIAQGVLEQ-NPGALDGSDAEVQEAFRSAGVEMMFAQ 237 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 I++ L + D++ E+ + + I L G +YE Sbjct: 238 IKESLHEFGVDFDVYFHENSLF--ESGAVEKSIQKLKDNGKLYEA--------------- 280 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 +ST GDD DR ++KSDG+ Y A D+AY K++RG D IY++G+DH GY+ Sbjct: 281 -EGAWWLKSTEYGDDKDRVVIKSDGNAAYIAGDIAYVADKFDRGHDLAIYMLGADHHGYI 339 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 RL A A A+ + VL+ ++V L RDG +KMSKRAG ITL +V+ +G D R+ Sbjct: 340 ARLRASAQALGYDPDAVEVLIGQMVNLVRDGKAVKMSKRAGTVITLDDLVEAIGVDGARY 399 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 ++ LD D QS +NPV+YVQY +AR SI R+A ++ FD Sbjct: 400 SLVRSSVDSSLDIDLGLWASQSADNPVYYVQYGHARICSILRKAAELG----FDTAALAD 455 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 P + E LI L E+P V+ A +EP+++A Y +LA+VFH + + P+ Sbjct: 456 APLDLLTHDKEGDLIRTLGEFPEVVATAATLREPHRIARYAEELAAVFHRFYDQCQVLPK 515 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL L A ++++ L +GV +P +M Sbjct: 516 ---AGEETEPIHSARLALASATRQVMSNALTTVGVSAPEKM 553 >gi|148822510|ref|YP_001287264.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis F11] gi|253799662|ref|YP_003032663.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis KZN 1435] gi|254550299|ref|ZP_05140746.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289554918|ref|ZP_06444128.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis KZN 605] gi|297633842|ref|ZP_06951622.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207] gi|297730829|ref|ZP_06959947.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506] gi|313658161|ref|ZP_07815041.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475] gi|148721037|gb|ABR05662.1| arginyl-tRNA synthetase argS (arginine-tRNA ligase) [Mycobacterium tuberculosis F11] gi|253321165|gb|ACT25768.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis KZN 1435] gi|289439550|gb|EFD22043.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis KZN 605] gi|328459408|gb|AEB04831.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis KZN 4207] Length = 550 Score = 563 bits (1452), Expect = e-158, Method: Composition-based stats. Identities = 196/582 (33%), Positives = 297/582 (51%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LK + + ++ L + + +ERPR HG ++N AM L++ +G +P Sbjct: 4 ADLAELLKATAAAVLAERGLDASALPQMVTVERPRIPEHGDYASNLAMQLAKKVGTNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + + S +AG GFIN+ L + K+++S++ +G YG +L+ G KV Sbjct: 64 LAGWLAEALTKVDGIASAEVAGPGFINMRLETAAQAKVVTSVIDAGHSYGHSLLLAGRKV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L+ G +V REYY ND GAQI+ A S+ Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGADVVREYYFNDHGAQIDRFANSLSA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + P+ Y G Y+ ++ +++ K L+ P+ + + V M Sbjct: 184 AAK------GEPTPQDGYAGSYITNIAEQVLQKAPDA-LSLPDAELRETFRAIGVDLMFD 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L D++ ED H G + + I L G +YE Sbjct: 237 HIKQSLHEFGTDFDVYTHEDSMHTG--GRVENAIARLRETGNIYE--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 R++ GDD DR ++KSDG Y A DLAY+ K +RGFD IY++G+DH GY Sbjct: 280 -KDGATWLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA + A + VL+ ++V L RDG P++MSKRAG +TL +V+ +G D+ R Sbjct: 339 IARLKAAAAAFGDDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D S ENPV+YVQYA+AR ++ R A ++ D + Sbjct: 399 YSLIRSSVDTAIDIDLALWSSASNENPVYYVQYAHARLSALARNAAELALIPDTNHL--- 455 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 E E L+ L E+PRV+E A +EP+++ YL DLA +H + R P Sbjct: 456 ----ELLNHDKEGTLLRTLGEFPRVLETAASLREPHRVCRYLEDLAGDYHRFYDSCRVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L RL L A +I +GL IIGV +P M Sbjct: 512 QG---DEQPTDLHTARLALCQATRQVIANGLAIIGVTAPERM 550 >gi|329894770|ref|ZP_08270571.1| Arginyl-tRNA synthetase [gamma proteobacterium IMCC3088] gi|328922759|gb|EGG30092.1| Arginyl-tRNA synthetase [gamma proteobacterium IMCC3088] Length = 558 Score = 563 bits (1452), Expect = e-158, Method: Composition-based stats. Identities = 191/586 (32%), Positives = 302/586 (51%), Gaps = 39/586 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + L + + ++K + I IER RD +HG ++N A+ +++ GL+P +AE Sbjct: 5 LQGLIAQALNALVEQSTLQKDSVGAIQIERTRDPSHGDFASNIALAMAKKAGLNPRQLAE 64 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 I+A + D +D IAG GFIN +LS S +++SI+ G +G N +G +V IE Sbjct: 65 KIIAALPADKALDRCEIAGPGFINFFLSKSASTSVIASILEQGAAFGTNALGNNQRVQIE 124 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+HVGH R A VGDTL+ L+ GY V RE+Y NDAGAQI+ LA SV R Sbjct: 125 FVSANPTGPLHVGHGRGAAVGDTLSRLLQACGYRVDREFYYNDAGAQIDHLARSVQARC- 183 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADK-----YSSELLNFPEEKWLPIVKDYSVQAM 241 + L + + P+ Y G Y+ + K DK E+ + + +++++V + Sbjct: 184 EGLDPSSPEWPQDGYRGEYIVDLAKAFQDKAVIQAEDREVAASGDIGDIDAIREFAVAYL 243 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 + DLKA ++ D + E + + D ++ L G+ YE Sbjct: 244 RREQDLDLKAFGVEFDYYFLESSLYA--SGAVDDTVERLRDNGFTYE------------- 288 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 D L + GDD +R + K +G YTYF D+AY K+ RG+D +I G+DH Sbjct: 289 ---DDGALWLNTEAFGDDKNRVMRKREGGYTYFVPDVAYHLNKWNRGYDVVINEQGADHH 345 Query: 362 GYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 V R+ A A+ + +L ++V + R+G +K+SKRAG ++TLR +VDEVG Sbjct: 346 STVTRVRAGLQALKAGIPEGWPEYVLHQMVLVMRNGEEVKLSKRAGSYVTLRDLVDEVGR 405 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ ++ R S L FD QS ENPV+Y+QYA+AR S+ + + Sbjct: 406 DATRYFLVARAPSSQLTFDIDLALSQSNENPVYYIQYAHARICSMLNKLANTPS------ 459 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + + E LI L ++P V++ A + P+ +A +L DLA+ FH ++ Sbjct: 460 ASVSDAALAALSEPQEEALIKELDKFPEVVKQAGQQRAPHMIANFLKDLAAAFHTFYNAH 519 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ R+ L A ++ +GL+I+GV +P M Sbjct: 520 K-------VLVDDATTQEARVALCLATQHVLQNGLDILGVSAPESM 558 >gi|15608432|ref|NP_215808.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv] gi|15840742|ref|NP_335779.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551] gi|31792485|ref|NP_854978.1| arginyl-tRNA synthetase [Mycobacterium bovis AF2122/97] gi|121637221|ref|YP_977444.1| arginyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148661080|ref|YP_001282603.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra] gi|167969617|ref|ZP_02551894.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra] gi|215403132|ref|ZP_03415313.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987] gi|215430177|ref|ZP_03428096.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis EAS054] gi|215445469|ref|ZP_03432221.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis T85] gi|219557191|ref|ZP_03536267.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis T17] gi|224989696|ref|YP_002644383.1| arginyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172] gi|254364189|ref|ZP_04980235.1| arginyl-tRNA synthetase argS (arginine-tRNA ligase) [Mycobacterium tuberculosis str. Haarlem] gi|260186229|ref|ZP_05763703.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A] gi|260200343|ref|ZP_05767834.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis T46] gi|260204548|ref|ZP_05772039.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis K85] gi|289442731|ref|ZP_06432475.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis T46] gi|289446887|ref|ZP_06436631.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis CPHL_A] gi|289569302|ref|ZP_06449529.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis T17] gi|289573955|ref|ZP_06454182.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis K85] gi|289745038|ref|ZP_06504416.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987] gi|289753369|ref|ZP_06512747.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis EAS054] gi|289757392|ref|ZP_06516770.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis T85] gi|294994847|ref|ZP_06800538.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis 210] gi|306775461|ref|ZP_07413798.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu001] gi|306971571|ref|ZP_07484232.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu010] gi|307079285|ref|ZP_07488455.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu011] gi|307083854|ref|ZP_07492967.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu012] gi|54039682|sp|P67570|SYR_MYCBO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|54042043|sp|P67569|SYR_MYCTU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|166232808|sp|A1KI80|SYR_MYCBP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|166232811|sp|A5U1Z1|SYR_MYCTA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|254782976|sp|C1AMT6|SYR_MYCBT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|1322416|emb|CAA97757.1| PROBABLE ARGINYL-TRNA SYNTHETASE ARGS (ARGRS) (Arginine--tRNA ligase) [Mycobacterium tuberculosis H37Rv] gi|13880933|gb|AAK45593.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551] gi|31618074|emb|CAD94185.1| PROBABLE ARGINYL-TRNA SYNTHETASE ARGS (ARGRS) (Arginine--tRNA ligase) [Mycobacterium bovis AF2122/97] gi|121492868|emb|CAL71339.1| Probable arginyl-tRNA synthetase argS [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|134149703|gb|EBA41748.1| arginyl-tRNA synthetase argS (arginine-tRNA ligase) [Mycobacterium tuberculosis str. Haarlem] gi|148505232|gb|ABQ73041.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra] gi|224772809|dbj|BAH25615.1| arginyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172] gi|289415650|gb|EFD12890.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis T46] gi|289419845|gb|EFD17046.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis CPHL_A] gi|289538386|gb|EFD42964.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis K85] gi|289543056|gb|EFD46704.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis T17] gi|289685566|gb|EFD53054.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987] gi|289693956|gb|EFD61385.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis EAS054] gi|289712956|gb|EFD76968.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis T85] gi|308216081|gb|EFO75480.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu001] gi|308358941|gb|EFP47792.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu010] gi|308362849|gb|EFP51700.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu011] gi|308366489|gb|EFP55340.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu012] gi|323720249|gb|EGB29348.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis CDC1551A] Length = 550 Score = 563 bits (1452), Expect = e-158, Method: Composition-based stats. Identities = 196/582 (33%), Positives = 297/582 (51%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LK + + ++ L + + +ERPR HG ++N AM L++ +G +P Sbjct: 4 ADLAELLKATAAAVLAERGLDASALPQMVTVERPRIPEHGDYASNLAMQLAKKVGTNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + + S +AG GFIN+ L + K+++S++ +G YG +L+ G KV Sbjct: 64 LAGWLAEALTKVDGIASAEVAGPGFINMRLETAAQAKVVTSVIDAGHSYGHSLLLAGRKV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L+ G +V REYY ND GAQI+ A S+ Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGADVVREYYFNDHGAQIDRFANSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + P+ Y G Y+ ++ +++ K L+ P+ + + V M Sbjct: 184 AAK------GEPTPQDGYAGSYITNIAEQVLQKAPDA-LSLPDAELRETFRAIGVDLMFD 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L D++ ED H G + + I L G +YE Sbjct: 237 HIKQSLHEFGTDFDVYTHEDSMHTG--GRVENAIARLRETGNIYE--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 R++ GDD DR ++KSDG Y A DLAY+ K +RGFD IY++G+DH GY Sbjct: 280 -KDGATWLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA + A + VL+ ++V L RDG P++MSKRAG +TL +V+ +G D+ R Sbjct: 339 IARLKAAAAAFGDDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D S ENPV+YVQYA+AR ++ R A ++ D + Sbjct: 399 YSLIRSSVDTAIDIDLALWSSASNENPVYYVQYAHARLSALARNAAELALIPDTNHL--- 455 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 E E L+ L E+PRV+E A +EP+++ YL DLA +H + R P Sbjct: 456 ----ELLNHDKEGTLLRTLGEFPRVLETAASLREPHRVCRYLEDLAGDYHRFYDSCRVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L RL L A +I +GL IIGV +P M Sbjct: 512 QG---DEQPTDLHTARLALCQATRQVIANGLAIIGVTAPERM 550 >gi|242241972|ref|ZP_04796417.1| arginyl-tRNA synthetase [Staphylococcus epidermidis W23144] gi|242234603|gb|EES36915.1| arginyl-tRNA synthetase [Staphylococcus epidermidis W23144] Length = 553 Score = 563 bits (1451), Expect = e-158, Method: Composition-based stats. Identities = 196/586 (33%), Positives = 308/586 (52%), Gaps = 34/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L ++ K + + I I IE P+D +G S+N AM+L++ + Sbjct: 1 MSIIDQVKQTLIEEIEVSIRKANLAEDI-PEIKIEIPKDPKNGDYSSNIAMVLTKIAKRN 59 Query: 61 PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ IV + V IAG GFIN YL YL I+ + G +G K Sbjct: 60 PREIAQAIVDHLDTSKAHVKQVDIAGPGFINFYLDNQYLTAIIPEAITKGDRFGYATQSK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 T + +E+VSANPTG +H+GH R A VGD+LA+++ +GY VTREYYINDAG QI LA Sbjct: 120 NTNILLEYVSANPTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ RY +AL + ++P Y G + +GK+LA K+ E+ ++ +E+ L + V Sbjct: 180 SIEARYFEALGDTSYEMPADGYNGKDIIEIGKDLAVKH-PEIKDYTDEERLKTFRQLGVD 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M+ ++ DL N+ D + SE + + I + + + GY YE Sbjct: 239 YEMEKLKKDLSDFNVHFDNWFSETSLY--ENGAIENTLSKMKELGYTYEA---------- 286 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 R++ DD DR L+K DG+YTYF D AY K RG D +I +MG+D Sbjct: 287 ------DGATWLRTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A ++ + + ++VRL ++G +KMSKR G+ ITLR ++DEVG Sbjct: 341 HHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGI 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R DFD KEQS++NP++Y QYA+AR SI +QAK+ ++ D Sbjct: 401 DAARYFLTMRSPDSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEQGIEVSTDA 460 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + + L+ +AE+ IE+A + P++L Y+ DLA+ FH ++ Sbjct: 461 DFSKI------NNDKAIDLLKKVAEFESTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAE 514 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ + T + ++ AV +++ L ++GV +P M Sbjct: 515 K-------VLTDDTEKTKAYVAMIEAVRITLHNALALVGVTAPESM 553 >gi|308272771|emb|CBX29375.1| Arginyl-tRNA synthetase [uncultured Desulfobacterium sp.] Length = 554 Score = 563 bits (1451), Expect = e-158, Method: Composition-based stats. Identities = 204/586 (34%), Positives = 340/586 (58%), Gaps = 36/586 (6%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 + +D L + K+ K K+ IE P+ AHG S+N AM+++ + P Sbjct: 3 NILSDI---LLSAAKKAFDKQKLASSDFPAFGIEEPKLSAHGDFSSNFAMVMASLQKMPP 59 Query: 62 LTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 IAE I A I + +D + IAG GFIN +++P +L +I ++G IGK Sbjct: 60 RKIAEAITAEIEDTEGVIDKIEIAGPGFINFFINPCAWHSVLRTIYEKDEKFGSCDIGKN 119 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KV +EFVSANPTGP+HVGH R A VGD+ A++++F GY+V REYYIND+G QI+TL S Sbjct: 120 RKVQVEFVSANPTGPLHVGHGRGAAVGDSTANILSFCGYDVQREYYINDSGRQISTLGRS 179 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V+ RY++ L+ + P Y G Y++ + +++ ++ +LL+ PEEK + ++ Sbjct: 180 VYLRYKE-LHEEKINFPGDCYQGDYIRDIAQKIKNENQIDLLDEPEEKAVMFCARFAADD 238 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 ++ I++DL+ ++ D + SE D ++ ++++ + +YE Sbjct: 239 ILADIKNDLELFGVKFDNWYSEQSLF--DSGKVKSVLEDFKNKNIIYE------------ 284 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 F+++ GD+ DR +++++G TYFA+D+AY K++RGF+ ++ V G+DH Sbjct: 285 ----KDGAFWFKTSEYGDEKDRVVIRNNGLTTYFASDIAYHIDKFDRGFERIVDVWGADH 340 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY++R+ A A +K+ Q NV+L +LV L R+G P+ MS R+G+F+TL VV EVG+D Sbjct: 341 HGYIQRICASIEASGQKEDQFNVILIQLVNLLRNGEPVAMSTRSGEFVTLEDVVKEVGAD 400 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF-PDLDFDL 479 + RF+ L R LDFD K++S ENPV+YVQY +AR SI R+A ++ ++ +D Sbjct: 401 AARFIFLTRHYESHLDFDLELAKKKSNENPVYYVQYVHARISSIIRKADELGVKEIRYDD 460 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 V+ + E+Q++ L+ YP V++++ EP+++ +YL +LA+ FH +++ Sbjct: 461 KNITVLK-----EAEEIQILKILSTYPEVVKSSAELLEPHRITYYLMNLAAAFHSYYNKC 515 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R V +++ +T RL LV A+ +I +GL ++GV +P M Sbjct: 516 R-------VLSDDPVITKNRLFLVLAIKKVIRNGLKLLGVSAPEIM 554 >gi|4894688|gb|AAD32590.1|AF126720_1 arginyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155] Length = 550 Score = 563 bits (1451), Expect = e-158, Method: Composition-based stats. Identities = 193/582 (33%), Positives = 293/582 (50%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LK + + ++ L + +ERPR+ HG +TN A+ L + +G++P Sbjct: 4 ADLAELLKATAAAVLTEHDLDVAALPATVTVERPRNPEHGDYATNLALQLGKKVGVNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + + +AG GF+NL + S I+++++ + YG + G V Sbjct: 64 LAGWLATALTAADGIAVAEVAGPGFVNLRIEASAQGVIITNVLAAEGSYGSSDQYAGRNV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGDTL L+A G VTREYY ND GAQI+ S+ Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDTLGRLLATQGAAVTREYYFNDHGAQIDRFVNSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + +++ K +L PE++ + V M Sbjct: 184 SAK------GEPTPEDGYAGDYIVDIAQQVIAKAPD-VLGLPEDQQRETFRAIGVNLMFT 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L D++ D H + I L G +YE Sbjct: 237 HIKQSLHDFGTDFDVYTHGDWMHT--SGRVDQAITQLREAGSIYE--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 + R+T GDD DR ++KSDG+ Y A DLAY+ K +RGFD IY++G+DH GY Sbjct: 280 -KDGAVWLRTTDFGDDKDRVVIKSDGNAAYIAGDLAYYLDKRKRGFDLCIYMVGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA+ + + VL+ ++V L RDG P++MSKRAG ITL +V+ +G D+ R Sbjct: 339 IARLKAAAAALGDDPDTVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D S ENPV+YVQYA+AR ++ R A D+ ++ D Sbjct: 399 YALIRSSVDTPIDIDLELWSSASNENPVYYVQYAHARLCALARNAADLGVSVNTDHL--- 455 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + E LI +L E+PRV++ A +EP+++ YL DLA +H + R P Sbjct: 456 ----DLLTHEKEGALIRNLGEFPRVLKTAASLREPHRVCRYLEDLAGDYHRFYDSCRVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L RL L A +I +GL I+GV +P M Sbjct: 512 QG---DEEPGDLHSARLALCRATRQVIANGLAILGVSAPERM 550 >gi|111018491|ref|YP_701463.1| arginyl-tRNA synthetase [Rhodococcus jostii RHA1] gi|123145255|sp|Q0SGN1|SYR_RHOSR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|110818021|gb|ABG93305.1| arginine--tRNA ligase [Rhodococcus jostii RHA1] Length = 550 Score = 563 bits (1451), Expect = e-158, Method: Composition-based stats. Identities = 188/585 (32%), Positives = 299/585 (51%), Gaps = 42/585 (7%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + L+ ++ + ++ +L + +ERPR+ HG +TN AM +++ +G +P Sbjct: 4 ADLAELLRGTAAKVLDERGLDVSVLPETLTVERPRNPEHGDYATNVAMQVAKKVGTNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + +DS IAG GF+N+ L+ I++ I+ G +G G ++ Sbjct: 64 LAGWLAEALTAAEGIDSADIAGPGFLNIRLAADAQGAIVAKILDEGAAFGSGHTLDGKRI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L +++ G VTREYY ND GAQI+ + S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRILSTQGAAVTREYYFNDHGAQIDRFSRSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + ++ + ++L P + + + V M Sbjct: 184 AAK------GEPAPEDGYAGAYIADIAAQVQSQ-RPDVLELPAGEQQEVFRAIGVDLMFA 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L + D++ E+ + + ++ L G +++ Sbjct: 237 HIKRTLHEFGVDFDVYFHENSLF--ESGAVEKAVETLKDSGNLFQ--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 + +ST GDD DR ++KSDG+ Y A D+AYF+ K RGFD IY++G+DH GY Sbjct: 280 -EDGAWWLKSTDFGDDKDRVVIKSDGNAAYIAGDIAYFQDKRSRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA + + VL+ ++V L RDG+ +KMSKRAG ITL +V+ +G D+ R Sbjct: 339 IGRLKAAAAAFGDDPDTVEVLIGQMVNLVRDGVAVKMSKRAGTVITLDDLVEAIGVDASR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF---PDLDFDLF 480 + M+ +D D ENPV+YVQYA+AR +I R A D+ D DF L Sbjct: 399 YAMIRSSVDSSIDIDLELWTSTGNENPVYYVQYAHARLSAIARNAADLGIAVADPDFSLL 458 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 E LI L EYPRV+ +A +EP+++A YL +LA +H + R Sbjct: 459 ----------VSEQEGDLIRTLGEYPRVVTSAANLREPHRIARYLEELAGAYHRFYGACR 508 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P+ L + RL L A ++++GL ++GV +P +M Sbjct: 509 ILPQG---DEEVGPLHIARLALCDASRQVLSNGLALLGVSAPEQM 550 >gi|323706265|ref|ZP_08117832.1| arginyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11] gi|323534429|gb|EGB24213.1| arginyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11] Length = 562 Score = 563 bits (1451), Expect = e-158, Method: Composition-based stats. Identities = 199/582 (34%), Positives = 322/582 (55%), Gaps = 32/582 (5%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 + + N ++E + + + + IE P++ G L+ N AMI+++P + P IA Sbjct: 11 QITEMVINSIEEAKKNGLLNIEEIPSVEIEEPKEKQFGDLAINTAMIMAKPAKMPPRKIA 70 Query: 66 ELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 E+I +K++ + + V IAG GF+N YL+ Y + L I G +YGR IG G +V Sbjct: 71 EIIKDGLKLEGTMIEKVEIAGPGFMNFYLNDDYNVEALMLIKEKGPDYGRVNIGNGKRVQ 130 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGPMH+G+ R +GD L+S++ ++GY+VTRE+YINDAG QI LS+ R Sbjct: 131 VEFVSANPTGPMHMGNARGGALGDALSSILDYAGYDVTREFYINDAGNQIEKFGLSLEAR 190 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 Y Q L D+++PEG Y G + KE + Y + + E+ + Y ++ + Sbjct: 191 YLQLL-GEDAEVPEGGYHGDDIIERAKEFLELYGDKYKDADPEERRKALIQYGLKKNIAK 249 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 +++DL+A I++D++ SE+ H + ++ +I+ L +GY YE Sbjct: 250 LKEDLEAYGIEYDVWFSENTLH--ESGEVQSVIEELKEKGYTYE---------------- 291 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGY 363 L F+ T+ G + D L++++G TY A+D+AY K K+ RGFD +I + G+DH G+ Sbjct: 292 KDGALWFKETLFGAEKDDVLVRANGFPTYLASDIAYHKNKFVTRGFDWVIDIWGADHHGH 351 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 V ++ A+ +++VLL +LVRL + ++MSKR G +TLR ++DEVG D+ R Sbjct: 352 VAPMKGAMKALGIDPDRLDVLLMQLVRLMKGKEVVRMSKRTGKMVTLRDLIDEVGKDAAR 411 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 F R +DFD EQS ENPVFYVQYA+AR SI RQ K+ D D Sbjct: 412 FFFNMRSADSAVDFDMDLAVEQSNENPVFYVQYAHARICSILRQLKEDGIDTD----NLK 467 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + + + +E+ LI LA P I A P+++ Y+ D++S+FH ++ R Sbjct: 468 EVNLKLLSEDTEISLIKKLAYLPEEITIAANTMAPHRITRYILDVSSLFHTFYNSCR--- 524 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V+ + +L R+ L+ A +I + L+++ + +P +M Sbjct: 525 ----VRGVDEELMKARIVLIDATRIVIKNVLDMLKITAPEKM 562 >gi|323699296|ref|ZP_08111208.1| arginyl-tRNA synthetase [Desulfovibrio sp. ND132] gi|323459228|gb|EGB15093.1| arginyl-tRNA synthetase [Desulfovibrio desulfuricans ND132] Length = 547 Score = 563 bits (1451), Expect = e-158, Method: Composition-based stats. Identities = 216/578 (37%), Positives = 334/578 (57%), Gaps = 34/578 (5%) Query: 8 SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 L+ LK+ + + D+ VIE P+D A G +S N AM+L++ P +AE Sbjct: 4 KIHLEGALKQALEGLGLP--WPDKAVIEPPKDSAFGDMSANVAMLLAKDAKKAPRAVAED 61 Query: 68 IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127 I A + D ++ + IAG GF+N +P++ R+ +S+I+ G YG + +G GTKV +E+ Sbjct: 62 IKAALAGDALIEKIDIAGPGFLNFTFAPAFWRETVSAILDQGEAYGSSTLGNGTKVQVEY 121 Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187 VSANPTGP+H+GH R A +GD+L ++ +GY+V EYYINDAG Q+ L S+ +R +Q Sbjct: 122 VSANPTGPLHIGHGRGAALGDSLTRILEKAGYDVEAEYYINDAGRQMRILGGSILYRARQ 181 Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247 N ++ PE YY G Y+ + ++ +LL+ PE + K+Y + +++ I+D Sbjct: 182 LGGLNPAE-PEDYYRGEYITDIARDFMA-MRPDLLDLPEADAVEACKEYGMGVILQGIKD 239 Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307 DL A +++HDI+ SE + + + +L G Y Sbjct: 240 DLAAFHVRHDIWFSEKSLV--NDGKVDETFADLTASGMGYAA----------------DG 281 Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367 F+ST++GDD DR L KS+G TYFA+D+AY K++RGFD +I + G+DH GYV R+ Sbjct: 282 AFWFKSTLLGDDKDRVLRKSNGDTTYFASDIAYHDNKFKRGFDLVIDIWGADHHGYVPRM 341 Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 A A+ K ++V+L LV L RDG PI MS RAG F TL+ VVDEVGSD+ RFM L Sbjct: 342 MAACEALG-KPGGLSVILVNLVNLLRDGQPIAMSTRAGQFETLKDVVDEVGSDAARFMFL 400 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487 RK+ LDFD VK++S +NPV+YVQYA+AR RS+ ++A++ + P ++ Sbjct: 401 SRKSDSKLDFDLELVKQKSMDNPVYYVQYAHARIRSLDKKAEEAGI-RPAAVSPASLALL 459 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 ++E+D L+L+ L +YP +E A Q P+ ++ YL +LAS H ++++ Sbjct: 460 DTEWD---LELLKLLDQYPDYVEAAARTQSPHLISMYLQELASTLHRYYTNCH------- 509 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V + + RL L+ VA ++ +GL ++GV +P M Sbjct: 510 VLSAEPDVASARLMLLDCVAGVVANGLGLLGVNAPESM 547 >gi|254491079|ref|ZP_05104260.1| arginyl-tRNA synthetase [Methylophaga thiooxidans DMS010] gi|224463592|gb|EEF79860.1| arginyl-tRNA synthetase [Methylophaga thiooxydans DMS010] Length = 585 Score = 563 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 207/615 (33%), Positives = 317/615 (51%), Gaps = 62/615 (10%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + + L K +E L I IER +D HG + N AM+L++P ++P Sbjct: 1 MKDQLKNLVGQALSIFIQKHGLEID-LPEIQIERTKDKTHGDFACNIAMMLAKPAKMNPR 59 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 IA IV + V V IAG GFIN +LS ++++ I+ +YG++ IGKG K Sbjct: 60 QIATDIVEALPTSDVVTQVEIAGPGFINFFLSAEASQQVVKEILSKAEKYGQSQIGKGKK 119 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V +EFVSANPTGP+HVGH R A G ++SL+ +G+ V REYY+NDAG Q++ L SV+ Sbjct: 120 VQVEFVSANPTGPLHVGHGRGAAYGSVVSSLLNAAGFNVHREYYVNDAGRQMDILGTSVW 179 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE---------------- 226 RY QA P Y G Y+ + EL ++ + + + Sbjct: 180 LRYLQAC-GETITFPSNGYQGSYVLDIAAELKQTFAEQFRHPADAVFDGVPADEPQGGDK 238 Query: 227 ----------------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 E IV D + A++ IRDDL ++D + SE + Sbjct: 239 ELHIDGLTNQAKQLLGEANYRIVFDKGLNAILGDIRDDLAEFGTEYDEWFSERSLV--ES 296 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + I+ L + G +YE ++ F+ST GD+ DR +++ +G Sbjct: 297 GEVEKAIEQLKQAGQLYE----------------EKGAWWFKSTDYGDEKDRVVIRDNGQ 340 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFA+D+AY KY+RGFD +I + G+DH GY+ R++A A+ + Q+ VLL + Sbjct: 341 ATYFASDIAYHLNKYQRGFDEIIDIWGADHHGYIPRVKASMQAMQQNVDQLKVLLVQFAV 400 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 LYR + MS R+G+F+TLR + DEVG D+ RF + R + +DFD K QS +NP Sbjct: 401 LYRGAEKVGMSTRSGEFVTLRQLRDEVGKDAARFFYVMRGADQHMDFDLELAKSQSNDNP 460 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+YVQYA+AR S+FRQ + D +++ + +T E L+ LA+YP ++E Sbjct: 461 VYYVQYAHARVCSVFRQLTERGHAWDKATGEQHL---DRLTETHEDALMTMLAKYPEILE 517 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A + P+ LA YL DLA FH +++ + ++ +L+ RL L+ AV +I Sbjct: 518 TAALNHTPHLLAHYLTDLARDFHTYYNAHQF-------IVDDNELSQARLTLIEAVRQVI 570 Query: 571 NSGLNIIGVESPNEM 585 + L ++GV +P M Sbjct: 571 QNALTVMGVSAPESM 585 >gi|319400084|gb|EFV88320.1| arginyl-tRNA synthetase [Staphylococcus epidermidis FRI909] Length = 553 Score = 563 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 196/586 (33%), Positives = 309/586 (52%), Gaps = 34/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L ++ K + + I I IE P+D +G S+N AM+L++ + Sbjct: 1 MSIIDQVKQTLIEEIEVSIRKANLAEDI-PEIKIEIPKDPKNGDYSSNIAMVLTKIAKRN 59 Query: 61 PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ IV + V IAG GFIN YL YL I+ + G +G K Sbjct: 60 PREIAQAIVDHLDTSKAHVKQVDIAGPGFINFYLDNQYLTDIIPEAITKGDRFGYATQSK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 T + +E+VSANPTG +H+GH R A VGD+LA+++ +GY VTREYYINDAG QI LA Sbjct: 120 NTNILLEYVSANPTGDLHIGHARNAAVGDSLANILIAAGYNVTREYYINDAGNQITNLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ RY +AL + ++P Y G + +GK+LA K+ E+ ++ +E+ L + V Sbjct: 180 SIEARYFEALGDTSYEMPADGYNGKDIIEIGKDLAVKH-PEIKDYTDEERLKTFRQLGVD 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M+ ++ DL N+ D + SE + + I++ + + GY YE Sbjct: 239 YEMEKLKKDLSDFNVHFDNWFSETSLY--ENGAIKNTLSKMKELGYTYEA---------- 286 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 R++ DD DR L+K DG+YTYF D AY K RG D +I +MG+D Sbjct: 287 ------DGATWLRTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A ++ + + ++VRL ++G +KMSKR G+ ITLR ++DEVG Sbjct: 341 HHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGI 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R DFD KEQS++NP++Y QYA+AR SI +QAK+ ++ D Sbjct: 401 DAARYFLTMRSPDSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEQGIEVSTDA 460 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + + L+ +AE+ IE+A + P++L Y+ DLA+ FH ++ Sbjct: 461 DFSKI------NNDKAIDLLKKVAEFESTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAE 514 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ + T + ++ AV +++ L ++GV +P M Sbjct: 515 K-------VLTDDTEKTKAYVAMIEAVRITLHNALALVGVTAPESM 553 >gi|57866242|ref|YP_187858.1| arginyl-tRNA synthetase [Staphylococcus epidermidis RP62A] gi|293368064|ref|ZP_06614696.1| arginine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)] gi|71153572|sp|Q5HRD1|SYR_STAEQ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|57636900|gb|AAW53688.1| arginyl-tRNA synthetase [Staphylococcus epidermidis RP62A] gi|291317754|gb|EFE58168.1| arginine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)] gi|329738198|gb|EGG74413.1| arginine--tRNA ligase [Staphylococcus epidermidis VCU045] Length = 553 Score = 563 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 196/586 (33%), Positives = 308/586 (52%), Gaps = 34/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L ++ K + + I I IE P+D +G S+N AM+L++ + Sbjct: 1 MSIIDQVKQTLIEEIEVSIRKANLAEDI-PEIKIEIPKDPKNGDYSSNIAMVLTKIAKRN 59 Query: 61 PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ IV + V IAG GFIN YL YL I+ + G +G K Sbjct: 60 PREIAQAIVDHLDTSKAHVKQVDIAGPGFINFYLDNQYLTAIIPEAITKGDRFGYATQSK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 T + +E+VSANPTG +H+GH R A VGD+LA+++ +GY VTREYYINDAG QI LA Sbjct: 120 NTNILLEYVSANPTGDLHIGHARNASVGDSLANILIAAGYNVTREYYINDAGNQITNLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ RY +AL + ++P Y G + +GK+LA K+ E+ ++ +E+ L + V Sbjct: 180 SIEARYFEALGDTSYEMPADGYNGKDIIEIGKDLAVKH-PEIKDYTDEERLKTFRQLGVD 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M+ ++ DL N+ D + SE + + I + + + GY YE Sbjct: 239 YEMEKLKKDLSDFNVHFDNWFSETSLY--ENGAIENTLSKMKELGYTYEA---------- 286 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 R++ DD DR L+K DG+YTYF D AY K RG D +I +MG+D Sbjct: 287 ------DGATWLRTSDFKDDKDRVLIKKDGNYTYFTPDTAYHYNKINRGNDILIDLMGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A ++ + + ++VRL ++G +KMSKR G+ ITLR ++DEVG Sbjct: 341 HHGYINRLKASLETFGVDSDRLEIQIMQMVRLMQNGEEVKMSKRTGNAITLREIMDEVGI 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R DFD KEQS++NP++Y QYA+AR SI +QAK+ ++ D Sbjct: 401 DAARYFLTMRSPDSHFDFDLELAKEQSQDNPIYYAQYAHARICSILKQAKEQGIEVSTDA 460 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + + L+ +AE+ IE+A + P++L Y+ DLA+ FH ++ Sbjct: 461 DFSKI------NNDKAIDLLKKVAEFESTIESAAEHRAPHRLTNYIQDLAAAFHKFYNAE 514 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ + T + ++ AV +++ L ++GV +P M Sbjct: 515 K-------VLTDDTEKTKAYVAMIEAVRITLHNALALVGVTAPESM 553 >gi|197122748|ref|YP_002134699.1| arginyl-tRNA synthetase [Anaeromyxobacter sp. K] gi|238689865|sp|B4UEJ9|SYR_ANASK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|196172597|gb|ACG73570.1| arginyl-tRNA synthetase [Anaeromyxobacter sp. K] Length = 598 Score = 563 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 229/596 (38%), Positives = 344/596 (57%), Gaps = 28/596 (4%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDR---IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 R+ ++ + + + +E PRD HG + NAAM+L++ G P Sbjct: 2 VRDRVIELFRKALAQGADDGRWPAAGAGFSVEAPRDPKHGDFAVNAAMVLAKQAGRPPRE 61 Query: 64 IAELIVARI---KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 +A+ IV + D+ + IAG GFIN+ LSP + L+ V G +YGR +G+G Sbjct: 62 LAQAIVEAVRAADTAGDLAGLEIAGPGFINVRLSPDLWLRTLARAVAEGPDYGRTAVGQG 121 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KV +E+VSANPTGPMHVGH R AVVGD + L+ ++G++VTREYY+ND GAQ+ TLA S Sbjct: 122 KKVIVEYVSANPTGPMHVGHGRNAVVGDGVQGLLRWAGFDVTREYYVNDYGAQVQTLARS 181 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V RYQ+ L+ +P YPG Y+K + L +Y + L+ PE +WL + +D++VQ Sbjct: 182 VHLRYQE-LHGRTVTMPPKSYPGEYVKDIAAGLKAEYGARFLDAPEAEWLTLFRDHAVQH 240 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT-- 298 ++ +IR DL A+NI D + SE + + + + L + VY G LPPPKSK Sbjct: 241 VLGMIRGDLAAVNISFDRWSSEKALY--ESGTVDRFLRFLEEKDLVYVGKLPPPKSKKGQ 298 Query: 299 --------TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350 + LFRS+ GD+VDRP+ K+DG+ TYF AD+AY K +R D Sbjct: 299 PPAQPQPDEEGVTAAEDLTLFRSSAYGDEVDRPVKKADGTPTYFCADIAYHWDKRQR-AD 357 Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 ++ V+G+DH GYV RLEA A+ + ++V+L ++V L R G +KMSKRAG ++L Sbjct: 358 ALVDVLGADHGGYVPRLEAAMEALGASRKDLHVVLIQMVSLMRGGESVKMSKRAGTLVSL 417 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R VVDEVG D+ RF+ L R++ LDFD K Q+ +NPVFYVQY +AR +IF++A++ Sbjct: 418 REVVDEVGRDATRFIFLTRRSDAPLDFDVELAKRQTLDNPVFYVQYGHARLAAIFQKARE 477 Query: 471 IFPDL-DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 + DFDL + E LI +A +P ++ A +A EP+++AFYL + Sbjct: 478 AGHAVPDFDLEAARTLA-----SPEEQDLIRRIAAFPDMLAAAALAYEPHRVAFYLQETI 532 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + FH ++ G+++ V + T RL L A+ ++ +GL ++GV +P+ M Sbjct: 533 AAFHSWYTQGKKSGEK--VIGPDPVKTAARLFLCRALKQVLANGLAVLGVSAPDRM 586 >gi|313894766|ref|ZP_07828326.1| arginine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430] gi|312976447|gb|EFR41902.1| arginine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430] Length = 553 Score = 563 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 210/587 (35%), Positives = 305/587 (51%), Gaps = 36/587 (6%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + + + + + + + IV+E P + G ++TN AM +R Sbjct: 1 MQIKQEIEQAIMTAAERAAAEGLLPQGAAFPPIVLEEPPEKDMGDVATNFAMQSARVFRK 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR-NLIG 118 P IAE+IV+ + D ++ IAG GFINLYL PS +L ++V+G YG+ Sbjct: 61 SPKAIAEIIVSYLTGD-WLEHTEIAGPGFINLYLKPSVYADMLRGVLVAGEAYGQLPARA 119 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 +V +E+VSANPTGP+HVGH R A VG L L+ +GY V EYY+NDAG Q+N LA Sbjct: 120 DAPRVQVEYVSANPTGPLHVGHGRGAAVGSALVKLLRAAGYAVDSEYYVNDAGNQMNLLA 179 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 +SV RY + L PE Y G + + + DK + L PEE+ L I +D + Sbjct: 180 VSVNARYLELL-GQAVTFPENGYHGADITETARRIIDKDGDKYLALPEEERLRIFQDVAY 238 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + +++DL + D + SE H P +R +D L +G Y Sbjct: 239 REKLAALKEDLADFGVTFDRWFSERTLH---PDAVRRAVDELLARGTAYR---------- 285 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + RST GDD DR + + +G TY AAD+AY KY RG+ +I + G+ Sbjct: 286 ------KDGAVWLRSTDYGDDKDRVIFRDNGVPTYLAADIAYHDDKYRRGYGRLINIWGA 339 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GYV R++A AA+ AQ+ VL ++V LYRDG +K+SKR G+ +TLR +++EVG Sbjct: 340 DHHGYVARVKAAMAALGHDPAQLTVLFLQMVSLYRDGDLVKLSKRTGETVTLRELMEEVG 399 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ + R LDFD K++S ENPV+YVQYA+AR SIFRQA ++ Sbjct: 400 VDAARYFFIMRSLDSQLDFDLDLAKKRSNENPVYYVQYAHARISSIFRQAGELG------ 453 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L P + + +E+ LI LA YP I A P ++A Y Y+LA FH ++ Sbjct: 454 LMPADGAELSLLKEDTEIALIKKLAAYPEEIARAAAEYAPQRIARYSYELAGAFHSFYNQ 513 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R + + L RL LV A +I L I+GV +P +M Sbjct: 514 CR-------IVGQEKPLASARLALVTATRHVIRHSLGILGVSAPEQM 553 >gi|215410929|ref|ZP_03419737.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A] gi|298524796|ref|ZP_07012205.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A] gi|298494590|gb|EFI29884.1| arginyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A] Length = 550 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 196/582 (33%), Positives = 297/582 (51%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LK + + ++ L + + +ERPR HG ++N AM L++ +G +P Sbjct: 4 ADLAELLKATAAAVLAERGLDASALPQMVTVERPRIPEHGDYASNLAMQLAKKVGTNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + + S +AG GFIN+ L + K+++S++ +G YG +L+ G KV Sbjct: 64 LAGWLAEALTKVDGIASAEVAGPGFINMRLETAAQAKVVTSVIDAGHSYGHSLLLAGRKV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L+ G +V REYY ND GAQI+ A S+ Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGADVVREYYFNDHGAQIDRFANSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + P+ Y G Y+ ++ +++ K L+ P+ + + V M Sbjct: 184 AAK------GEPTPQDGYAGSYITNIAEQVLQKAPDA-LSLPDAELRETFRAIGVDLMFD 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L D++ ED H G + + I L G +YE Sbjct: 237 HIKQSLHEFGTDFDVYTHEDSMHTG--GRVENAIARLRETGNIYE--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 R++ GDD DR ++KSDG Y A DLAY+ K +RGFD IY++G+DH GY Sbjct: 280 -KDGATWLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA + A + VL+ ++V L RDG P++MSKRAG +TL +V+ +G D+ R Sbjct: 339 IARLKAAAAAFGDDSATVEVLIGQMVNLVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D S ENPV+YVQYA+AR ++ R A ++ D + Sbjct: 399 YSLIRSSVDTAIDIDLALWSSASNENPVYYVQYAHARLSALARNAAELALIPDTNHL--- 455 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 E E L+ L E+PRV+E A +EP+++ YL DLA +H + R P Sbjct: 456 ----ELLNHDKEGTLLRTLGEFPRVLETAASLREPHRVCRYLEDLAGDYHRFYDSCRVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L RL L A +I +GL IIGV +P M Sbjct: 512 QG---DEQPTDLHTARLALCQATRQVIANGLAIIGVTAPERM 550 >gi|53802759|ref|YP_115476.1| arginyl-tRNA synthetase [Methylococcus capsulatus str. Bath] gi|81680656|sp|Q602H4|SYR_METCA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|53756520|gb|AAU90811.1| arginyl-tRNA synthetase [Methylococcus capsulatus str. Bath] Length = 586 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 200/615 (32%), Positives = 307/615 (49%), Gaps = 61/615 (9%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + L++ L+ + + + IER RD AHG + N AM+L++ DP Sbjct: 1 MKKRLETLLRSALERLKTAGDLPADQEVPLQIERTRDPAHGDFAANTAMLLAKSARCDPR 60 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +AE I A + DP V IAG GFIN +L ++++ I G +GR+ IG G + Sbjct: 61 RLAEKIRAALPEDPAVIRTEIAGPGFINFFLDAIAQHRVITDIHSQGPGFGRSSIGAGQR 120 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V +EFVSANPTGP+HVGH R A G +A L+ +G++V REYY+NDAG Q++ LA SV+ Sbjct: 121 VQVEFVSANPTGPLHVGHGRGAAYGAVVADLLEAAGFDVHREYYVNDAGRQMDILAASVW 180 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE--------------- 227 RY + P Y G Y++ + +L ++ Sbjct: 181 LRYLENC-GEVLPFPANGYRGEYVRDIASDLYRTQGERYRTSADQVLLGLPPDEPQGGDK 239 Query: 228 -----------------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 + V + + +++ IRDDL + + SE + Sbjct: 240 EEYIDAVVSKSKNLLGPERYREVFNAGLDSILDDIRDDLGEFGTHYQEWFSERSL--TET 297 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + ++ L GYVYE F ST +GD+ DR L++ +G Sbjct: 298 GAVERALERLKSSGYVYE----------------KDGAQWFASTRLGDEKDRVLVRENGQ 341 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFA+D+AY K ERGFD ++ V G+DH GY+ R++A A+ +++ VLL + Sbjct: 342 TTYFASDVAYHLNKLERGFDRIVNVWGADHHGYIPRVKAAIQALGGDASKLEVLLVQFAV 401 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 LYR ++MS R+G+F+TLR + +EVG D+ RF + RK+ + +DFD ++ ENP Sbjct: 402 LYRGTERVQMSTRSGEFVTLRQLRNEVGKDAARFFYVMRKSDQHMDFDLKLATSRTNENP 461 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+YVQYA+AR S+FRQ + D R + E + EL L+ L+ YP V+E Sbjct: 462 VYYVQYAHARVCSVFRQLDEKGWARD---LGRGMRRLERLCEPHELTLVASLSRYPEVVE 518 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A + P+ L YL DLA+ FHG+++ + + L RL L+ AV +I Sbjct: 519 QAALQYAPHHLVHYLRDLAAEFHGYYNSCQF-------LVEDGDLRDARLNLIDAVRQVI 571 Query: 571 NSGLNIIGVESPNEM 585 +GL ++GV +P M Sbjct: 572 ANGLGLLGVSAPETM 586 >gi|285017188|ref|YP_003374899.1| arginyl-tRNA synthetase (arginine--tRNA ligase) protein [Xanthomonas albilineans GPE PC73] gi|283472406|emb|CBA14911.1| probable arginyl-trna synthetase (arginine--trna ligase) protein [Xanthomonas albilineans] Length = 562 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 190/591 (32%), Positives = 306/591 (51%), Gaps = 37/591 (6%) Query: 3 LFADFSSRLKNYLKEIDCKIKVE-KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 + + + + ++ + + + V+ERP+ HG ++NAAM+L++ +P Sbjct: 1 MKSQLRALIAQGIEALRATGILPTDTLPPDFVVERPKTREHGDFASNAAMLLAKAARTNP 60 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +A+ +V + + D+ V IAG GFIN +L P ++ + +++ G +YGR+L+G G Sbjct: 61 RALAQQLVDALPANDDIRKVEIAGPGFINFHLGPGAYQREVLTVLKQGHDYGRSLVGNGR 120 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 V +E+VSANPTGP+HVGH R A +GD LA L+ +G+ RE+Y ND G QI LA SV Sbjct: 121 TVGVEYVSANPTGPLHVGHGRAAAIGDCLARLLEANGWNARREFYYNDGGGQIENLARSV 180 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDY 236 R + D PE Y G Y++ V + + + L ++ + Sbjct: 181 QAR-AHGKTPDSHDWPEEGYRGDYIQDVADAYMTGATVNLEGHLVKGAKDPNDLEAIRRF 239 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 +V + DL A + DI+ E +R + + + L G+ YE Sbjct: 240 AVAYLRNEQNHDLAAFGVDFDIYFLESSLYR--DGKVEEAVQKLIASGHTYE-------- 289 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + L +ST GDD DR + KSDG+YTYF D+AY K++RG+ I + Sbjct: 290 --------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLSKWQRGYVRAITEL 341 Query: 357 GSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414 G+DH G + R+ A A+ K +L ++V + R G +K+SKRAG ++TLR ++ Sbjct: 342 GADHHGSLARVRAGLQAMDLGIPKGWPEYVLHQMVTVMRGGEEVKLSKRAGSYLTLRDLI 401 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 +E G D+ R+ ++ RK L FD ++QS +NPVFYVQYA+AR S+ RQA++ D Sbjct: 402 EEAGRDATRWFLIARKPDSQLTFDIDLARQQSNDNPVFYVQYAHARVCSLLRQAQEKQRD 461 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 D + DT+ L+L++ L+ YP V+ENA EP+ +A YL +LA+ FH Sbjct: 462 YD---PADGMSQLNRLNDTTSLELMMELSRYPEVVENAGHVLEPHLIAQYLRELATAFHT 518 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ +L L A ++ +GLN++GV +P +M Sbjct: 519 WYHGT-------PVLVDDASERNAKLALAVAAQQVLANGLNLLGVCAPEKM 562 >gi|319785770|ref|YP_004145245.1| arginyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1] gi|317464282|gb|ADV26014.1| arginyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1] Length = 562 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 190/587 (32%), Positives = 302/587 (51%), Gaps = 37/587 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 + + ++ + K+ VIERP+ HG +TNAAM+L++ +P +A Sbjct: 5 LKALVNQGIEALRVAGKLPADAPTPDFVIERPKTREHGDFATNAAMLLAKAARTNPRAVA 64 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 + +V + DV IAG GFIN +L+ ++ ++ ++ G EYGRN G+G + Sbjct: 65 QALVEAMPASDDVARAEIAGPGFINFHLAAGAWQREVAGVLRHGGEYGRNTTGQGRTAGV 124 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 E+VSANPTGP+HVGH R A +GD +A ++ +G++V RE+Y NDAG QI LA S R Sbjct: 125 EYVSANPTGPLHVGHGRAAAIGDCIARVLDANGWKVKREFYYNDAGVQIENLARSTQAR- 183 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDYSVQA 240 + L D++ P Y G Y++ V + + + + + ++ ++V Sbjct: 184 LRGLKPGDAEWPAEAYNGDYIQDVADAYLRGDTVEIEGHAVTASGDVEDIDSIRRFAVAY 243 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 + DL A ++ DI+ E +R + + + L +G+ YE Sbjct: 244 LRNEQNQDLAAFGVEFDIYFLESSLYR--DGKVEETVRELGAKGHTYE------------ 289 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + L RST GDD DR + KSDG+YTYF D+AY K++RG++ I +G+DH Sbjct: 290 ----EGGALWLRSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLSKWQRGYERAITELGADH 345 Query: 361 SGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 G + R+ A A+ K +L ++V + R G +K+SKRAG ++TLR +++E G Sbjct: 346 HGSLARVRAGLQALDVGIPKGWPEYVLHQMVTVMRGGEEVKLSKRAGSYLTLRDLIEEAG 405 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ ++ RK L FD ++QS +NPVFYVQYA+AR ++FRQ + D Sbjct: 406 RDATRWFLIARKPDSQLVFDIDLARQQSNDNPVFYVQYAHARVAALFRQGAEKGYAFDQ- 464 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + D L L+V L+ YP V+E A + EP+ +A YL +LA FH +++ Sbjct: 465 --ANGLANLARLDDDGSLTLVVELSRYPEVVEAAGQSLEPHLVAQYLRELAYAFHTWYAN 522 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V L RL L AV ++ +GL ++GV +P M Sbjct: 523 T-------PVLVEEPALRDARLALAQAVQQVLANGLGLLGVSAPERM 562 >gi|134301014|ref|YP_001114510.1| arginyl-tRNA synthetase [Desulfotomaculum reducens MI-1] gi|189083532|sp|A4J9D2|SYR_DESRM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|134053714|gb|ABO51685.1| arginyl-tRNA synthetase [Desulfotomaculum reducens MI-1] Length = 561 Score = 561 bits (1447), Expect = e-158, Method: Composition-based stats. Identities = 206/586 (35%), Positives = 322/586 (54%), Gaps = 33/586 (5%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 + + + L+ + K +V K + ++IE PR+ HG +TN AM L++P + P Sbjct: 7 NIKSSLAKALQVAIAGAVDKGQVNKLEIPEVIIEVPREKGHGDFATNLAMQLAKPAKMAP 66 Query: 62 LTIAELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 IAE I+ + + V+ V IAG GFIN YL PS++ ++ I+ YGR +G G Sbjct: 67 RKIAEAIIENLDLANTQVERVEIAGPGFINFYLQPSWVHGVIPMIIQEDRNYGRLELGDG 126 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +V +EFVSANPTG +H+G+ R A +GD+LAS++ F+GY V+REYYINDAG QI S Sbjct: 127 QRVQVEFVSANPTGLLHMGNARGAALGDSLASILDFAGYRVSREYYINDAGNQIENFGKS 186 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 + RY Q L D LPE Y G + K +K LL+ + + Y++Q Sbjct: 187 LEVRYLQQL-GQDIQLPEEGYHGEDIIDTVKGYINKNGRGLLDADQTTRRKTLAAYALQE 245 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 + IR+ L + +D++ SE H D I++ +D L ++G++YE Sbjct: 246 KLTHIRNTLLDFGVVYDVWYSEQALH--DSGAIQETLDELRQKGFIYE------------ 291 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 L F++T GD+ D +++S+G TYFAAD+AY K KY+RGFD +I + G+DH Sbjct: 292 ----QENALWFKATAFGDEKDEVVVRSNGIPTYFAADIAYHKDKYKRGFDRVIDIWGADH 347 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 G+V R++ A+ + + ++L +LVRL R G ++MSKR G F+TL +V+EVG D Sbjct: 348 HGHVNRMKGSMEALGHNRDNLQIILMQLVRLLRGGEVVRMSKRTGQFVTLEELVEEVGRD 407 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF-PDLDFDL 479 + R+ + R L+FD K Q+ +NPVFY+QYA+AR SI RQ ++ P + Sbjct: 408 AARYFFVMRSPDSHLEFDLDLAKSQTNDNPVFYIQYAHARICSILRQLQEQGRPLPEIAA 467 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 V+ +E+E + A++P I A P+++A YL+DLA +FH ++ Sbjct: 468 INPTVLKEEAELELLRKL-----ADFPSEIAAAAEMMAPHRIARYLHDLAGLFHSFYNSH 522 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R V N ++ RL LV V ++ + L ++G+ +P +M Sbjct: 523 R-------VITENEAISEARLVLVQCVRIVLRNALGLLGLTAPEKM 561 >gi|320530137|ref|ZP_08031207.1| arginyl-tRNA synthetase [Selenomonas artemidis F0399] gi|320137570|gb|EFW29482.1| arginyl-tRNA synthetase [Selenomonas artemidis F0399] Length = 553 Score = 561 bits (1447), Expect = e-158, Method: Composition-based stats. Identities = 210/587 (35%), Positives = 305/587 (51%), Gaps = 36/587 (6%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + + + + + + + L IV+E P + G ++TN AM +R Sbjct: 1 MQIKQEIEQAIMTAAERAAAEGLLPQGAALPPIVLEEPPEKDMGDVATNFAMQSARVFRK 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR-NLIG 118 P IAE+IV+ + D ++ IAG GFINLYL PS +L ++V+G YG+ Sbjct: 61 SPKAIAEIIVSYLTGD-WLERTEIAGPGFINLYLKPSVYADMLRGVLVAGEAYGQLPARA 119 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 +V +E+VSANPTGP+HVGH R A VG L L+ +GY V EYY+NDAG Q+N LA Sbjct: 120 DAPRVQVEYVSANPTGPLHVGHGRGAAVGSALVKLLCAAGYAVDSEYYVNDAGNQMNLLA 179 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 +SV RY + L PE Y G + + + DK + L PEE+ L I +D + Sbjct: 180 VSVNARYLELL-GQAVTFPENGYHGADITETARRIIDKDGDKYLALPEEERLRIFQDVAY 238 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + +++DL + D + SE H P +R +D L +G Y Sbjct: 239 REKLAALKEDLADFGVTFDRWFSERTLH---PDAVRRAVDELLARGTAYR---------- 285 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + RST GDD DR + + +G TY AAD+AY KY RG+ +I + G+ Sbjct: 286 ------KDGAVWLRSTDYGDDKDRVIFRDNGVPTYLAADIAYHDDKYRRGYGRLINIWGA 339 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GYV R++A AA+ AQ+ VL ++V LYRDG +K+SKR G+ +TLR +++EVG Sbjct: 340 DHHGYVARVKAAMAALGHDPAQLTVLFLQMVSLYRDGDLVKLSKRTGETVTLRELMEEVG 399 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ + R LDFD K++S ENP +YVQYA+AR SIFRQA ++ Sbjct: 400 VDAARYFFIMRSLDSQLDFDLDLAKKRSNENPAYYVQYAHARISSIFRQAGELG------ 453 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L P + + +E+ LI LA YP I A P ++A Y Y+LA FH ++ Sbjct: 454 LTPADGAELALLKEDTEIALIKKLAAYPEEIARAAAEYAPQRIARYSYELAGAFHSFYNQ 513 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R + + L RL LV A +I L I+GV +P +M Sbjct: 514 CR-------IVGREKPLASARLALVTATRHVIRHSLGILGVSAPEQM 553 >gi|305682134|ref|ZP_07404938.1| arginine--tRNA ligase [Corynebacterium matruchotii ATCC 14266] gi|305658607|gb|EFM48110.1| arginine--tRNA ligase [Corynebacterium matruchotii ATCC 14266] Length = 550 Score = 561 bits (1447), Expect = e-157, Method: Composition-based stats. Identities = 186/582 (31%), Positives = 298/582 (51%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVE-KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 +D S + +I +++ + +++V+ERPR+ HG +TN A+ +++ +G++P Sbjct: 4 SDLSHLINTEAHKILADRQLDVTALPEQVVVERPRNPEHGDYATNLALQIAKKVGMNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A L+V + ++ +V IAG GFIN+ L+ + +I++ I+ +G YG N + G ++ Sbjct: 64 LAGLLVDALSAHDEIATVDIAGPGFINIRLAAAAQGQIVADILAAGTTYGHNSLYSGERI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++A G +VTREYY ND G QI+ S+ Sbjct: 124 NLEFVSANPTGPVHLGSTRWAAVGDSLGRILAACGADVTREYYFNDHGRQIDRFTNSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + +PE Y G Y+ + + + +L E + V+ M Sbjct: 184 AAK------GQPVPEDGYGGDYISEIAANIVAQE-PGVLQQSEPDMRETFRALGVELMFD 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L + D++ E+ + + +D L G +Y Sbjct: 237 HIKATLHEFGVDFDVYFHENSLF--ESGAVDRAVDKLKENGNLY---------------- 278 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 RST GDD DR ++KSDG Y A D+AY K+ERG IY++G+DH GY Sbjct: 279 FSNGAWWLRSTNYGDDKDRVVIKSDGDAAYIAGDIAYVANKFERGHTRSIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL A AAA+ + VL+ +LV L RDG ++MSKRAG ITL +V+ +G D+ R Sbjct: 339 ISRLRAAAAAMGYNPNNVEVLIGQLVNLVRDGEAVRMSKRAGTIITLDDLVEAIGIDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ LD D QS ENPV+YVQYA+AR S+ ++A + +D Sbjct: 399 YSLVRSSVDSTLDIDLTLWANQSNENPVYYVQYAHARLCSLAKKAAAVGVTVDNPDLSL- 457 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + E LI L EYP V++ A +EP+++A Y+ +LA FH + + P Sbjct: 458 ------LTEDHEGTLIRTLGEYPTVVKAAAELREPHRIARYIEELAGTFHRFYDTCQILP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + RL L A +I + L ++GV +P +M Sbjct: 512 K---AGEQAQPIHTARLALATATRQVIANALGLLGVTAPEQM 550 >gi|157827969|ref|YP_001494211.1| arginyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165932660|ref|YP_001649449.1| arginyl-tRNA synthetase [Rickettsia rickettsii str. Iowa] gi|166232835|sp|A8GQM8|SYR_RICRS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|189083544|sp|B0BW17|SYR_RICRO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|157800450|gb|ABV75703.1| arginyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165907747|gb|ABY72043.1| arginyl-tRNA synthetase [Rickettsia rickettsii str. Iowa] Length = 576 Score = 561 bits (1446), Expect = e-157, Method: Composition-based stats. Identities = 243/585 (41%), Positives = 363/585 (62%), Gaps = 9/585 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +F ++LK + ++ + I + I+ P+D +G LS+N AMI++ + Sbjct: 1 MNIF----NQLKQDIIVASKQLYNNQAIANTATIDIPKDSFNGDLSSNVAMIIAAKESIA 56 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A + P + S+ IAG GFIN + + + I+ ++ I K Sbjct: 57 PREVALKFKEVLITLPYIASIEIAGPGFINFTIKADSWQASIKDILQHEEKFFEIDIDKS 116 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +NIE+VSANPTGPMH+GH R AV GD LA ++ Y VT+EYY+NDAG+QIN L + Sbjct: 117 RNINIEYVSANPTGPMHIGHARGAVYGDVLARILQKVSYSVTKEYYVNDAGSQINDLVST 176 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V RY++AL +P G YPG YL +G+ LA +Y ++LL ++ I+K ++V+ Sbjct: 177 VLLRYKEAL-GEQITIPAGLYPGEYLIPLGQILAKEYGNKLLTMNYDERFKIIKSFAVEK 235 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 M+ + R DL L I+HDIF SE H D I + + L G +YEG LP PK K + Sbjct: 236 MLDLNRKDLADLGIKHDIFFSEQSLH--DKGEIEETVKLLESMGLIYEGTLPAPKGKIHE 293 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + D +R Q LF+ST GD DRP+ K+DGS++YFA+DLAY K K ERG +++IYV+G+DH Sbjct: 294 EWD-NRVQKLFKSTKYGDSQDRPIEKADGSWSYFASDLAYAKDKIERGANHLIYVLGADH 352 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 SGYVKR+EA+ A+ +++ +++V +C+LV +G+P+KMSKR G F +++ V +EVG D Sbjct: 353 SGYVKRIEAIVKALGKEQVKVDVKICQLVNFVENGVPVKMSKRLGSFASVQDVNNEVGKD 412 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +RFMML R+N + LDFD KVKEQS+ENP+FYVQYA+ R SI +A+++ P+ ++ F Sbjct: 413 IIRFMMLTRQNDKPLDFDLVKVKEQSRENPIFYVQYAHVRTISILSKARELMPE-SYNNF 471 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 E+++I L + + +E + EP+++AFYL +LAS FH W+ G+ Sbjct: 472 ESGKYDLSLLSSEEEIEIIKLLVSWTKTLEASAKYFEPHRIAFYLINLASKFHSMWNFGK 531 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 EN RFV +N++LT+ RL L A+ +I SGL +IGVE N+M Sbjct: 532 ENSEYRFVIESNKELTLARLALASAIQKVIASGLEVIGVEPMNKM 576 >gi|190571604|ref|YP_001975962.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019007|ref|ZP_03334814.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|238065093|sp|B3CNF3|SYR_WOLPP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|190357876|emb|CAQ55335.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995116|gb|EEB55757.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 566 Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats. Identities = 259/585 (44%), Positives = 364/585 (62%), Gaps = 20/585 (3%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +F SS + + L E+ + + + ++E P + AHG + TN AM+L++ + Sbjct: 1 MNIFKQISSLISSKLNELKQRGVINTS-AENFIVEPPSNRAHGDIYTNVAMVLAKHEKKN 59 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P+ IA ++ K +V V IA GFIN++L IL I E+G IG Sbjct: 60 PIEIAGILAREFKPFDEVAEVEIASPGFINMHLKIEVWHGILKQINELKTEFGTLNIGNN 119 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 VN+EFVSANPTGP+H+GH R AV GD LA+L+ GY VT+EYYINDAGAQI+TL S Sbjct: 120 QAVNVEFVSANPTGPLHIGHARGAVFGDVLANLLKKVGYNVTKEYYINDAGAQIDTLIRS 179 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V+ RY++AL + +G YPG YLK +G+ LA KY EL E+ I+++Y++ + Sbjct: 180 VYLRYKEAL-GEKISIEKGLYPGEYLKPIGEGLAKKYGKELR---AEEDNQIIREYTLSS 235 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 ++++I++D+ L + HD+F SE + I + I L+ +G VYEG L PK K ++ Sbjct: 236 ILELIKEDMSLLGVNHDVFTSEYEL----RGKIEESIKILSDKGLVYEGYLEKPKGKESE 291 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 RK++LFRST GDDVDR L K DGS+TYFA+D+AY K RGF+NMI +GSDH Sbjct: 292 NWT-SRKEMLFRSTKFGDDVDRALKKEDGSWTYFASDIAYHFDKISRGFNNMIVELGSDH 350 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GYVKRL+AV +A+S+ +A+I V L +V + + P+KMSKR+G+F+T R VV+EVG D Sbjct: 351 GGYVKRLKAVVSALSDDQAKIEVKLHNIVNFFENEKPVKMSKRSGNFLTARDVVEEVGRD 410 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 RF+ML RKN +LDFDF KVKEQSK+NP+FYVQYA+AR S+ R A P D L Sbjct: 411 ITRFIMLTRKNDMVLDFDFAKVKEQSKDNPIFYVQYAHARAHSLMRNAPKELPTADPSLL 470 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 + EL LI LA++P V+E A EP+++ FYL ++A FH W +G+ Sbjct: 471 KTDG----------ELFLIKILAKWPDVVEIAARLYEPHRITFYLLEVAEAFHVLWGYGK 520 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +RF+ +N LT R+ LV A+A +I SGL+I +E EM Sbjct: 521 SDLNMRFILEDNLNLTAARMFLVQALAHVIASGLSIFNIEPLKEM 565 >gi|220927743|ref|YP_002504652.1| arginyl-tRNA synthetase [Clostridium cellulolyticum H10] gi|254782954|sp|B8I592|SYR_CLOCE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|219998071|gb|ACL74672.1| arginyl-tRNA synthetase [Clostridium cellulolyticum H10] Length = 564 Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats. Identities = 196/586 (33%), Positives = 307/586 (52%), Gaps = 32/586 (5%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + + N + + ++ + I IE PR+ HG STN AM +++ P Sbjct: 8 IRQQIRNAVINSINKSVETGELPSLEVTDITIEIPREKGHGDFSTNVAMQITKAAKKAPR 67 Query: 63 TIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 IA++I+ I D D V AG GFIN L SYL + ++ I YGR IG G Sbjct: 68 QIADIIIKNIVTDGTYIDKVTCAGPGFINFTLDNSYLYETVNIIQQEKENYGRINIGNGK 127 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 KV +EFVSANPTGP+H+G+ R +GD +AS++ +GY VTRE+ INDAG QI S+ Sbjct: 128 KVMVEFVSANPTGPLHMGNARGGALGDCIASVLDAAGYNVTREFLINDAGNQIEKFGTSL 187 Query: 182 FWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 RY Q + D+ + PE Y G + K+ + + +N E+ + D+++ Sbjct: 188 EARYIQLIKGEDAIEFPEDGYQGEDITEHMKDFIAIHGDKYINTDSEERKKVFVDFALPR 247 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 + I++ L++ I DI+ SE H+ + + I L +G E Sbjct: 248 NIARIKEGLESYGIHFDIWFSEQSLHK--SGEVAETIQLLKDRGCTVE------------ 293 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSD 359 L + +++G + D L++++G TYFAAD+AY + K+E RGF+ +I + G+D Sbjct: 294 ----KEGALWLKGSVIGSEKDEVLVRNNGIPTYFAADIAYHRNKFEKRGFEWVINLWGAD 349 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H G+V R++A AA+ +++V+L +LVRLYR+G +MSKR G I+L +V+EVG Sbjct: 350 HHGHVARMKAAMAALGINPDKLDVVLFQLVRLYRNGEIARMSKRTGKSISLMDLVEEVGR 409 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VR+ + + LDFD +QS ENPVFYVQYA+AR S+F+ + + Sbjct: 410 DGVRYFFNTKASGSHLDFDLDLAVKQSNENPVFYVQYAHARICSMFK----LLESEGIKV 465 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 N I E EL+LI L+EYP + + EP +L Y++D+AS FH ++ Sbjct: 466 PSANAIKAELLDKPEELELIRKLSEYPDEVRISAETLEPSRLTRYVHDVASTFHSFYNAC 525 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R V+ +L RL LV ++ + L+++ + +P M Sbjct: 526 R-------VRGEEEELMQARLVLVDCTRIVVKNVLDLLSITAPERM 564 >gi|222056007|ref|YP_002538369.1| arginyl-tRNA synthetase [Geobacter sp. FRC-32] gi|254782965|sp|B9M2S2|SYR_GEOSF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|221565296|gb|ACM21268.1| arginyl-tRNA synthetase [Geobacter sp. FRC-32] Length = 561 Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats. Identities = 188/587 (32%), Positives = 299/587 (50%), Gaps = 38/587 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + + L + I+IE+P HG +TN AM+L++ P +AE Sbjct: 5 LRTLISQGLAGCYADGSLSSGEFPSIIIEKPAHADHGDFATNVAMLLAKAEKKAPRMVAE 64 Query: 67 LIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 +V+ + + + IAG GFIN +L R+ L + G EYG++ +G G K+ + Sbjct: 65 TLVSHLADGSGVCEKIEIAGPGFINFHLKDEAWRQTLLEVDQIGFEYGKSGVGGGKKIQV 124 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+H+GH R A +GDT+ L++ +G++VTRE+Y NDAG QI LALSV R Sbjct: 125 EFVSANPTGPLHIGHGRGAALGDTICRLLSATGWDVTREFYYNDAGQQIANLALSVQARC 184 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKY-----SSELLNFPEEKWLPIVKDYSVQA 240 +D P Y G Y+ V + + + + + L ++ ++V Sbjct: 185 F-GNGPDDPGWPSDGYQGEYIIDVARAYMARETVHADDQHVTAAGDPQDLEAIRRFAVAF 243 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 + + DL A ++ D++ E D + + ++ L G+ YE Sbjct: 244 LRREQDQDLAAFDVHFDVYSLESDLYA--DGSVERVVRRLVDSGHTYE------------ 289 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 L R+T DD DR + KS G YTYF D+AY K+ERGF ++ G+DH Sbjct: 290 ----QDDALWLRTTSFADDKDRVMRKSGGGYTYFVPDVAYHLRKWERGFTRVVNEQGADH 345 Query: 361 SGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 + R+ A A+ +L ++V + R G +K+SKRAG ++TLR ++DEVG Sbjct: 346 HSTITRVRAGLQALDAGIPAGWPEYVLHQMVTVLRGGEEVKISKRAGSYVTLRDLIDEVG 405 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ RF + RK L FD K++S +NPV+YVQYA+AR SIF A + F Sbjct: 406 RDATRFFFVMRKPDSQLVFDIDLAKQKSLDNPVYYVQYAHARICSIFENAAEKG----FV 461 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + + + + E+ ++ LA +P V+E + EP+++A YL +LA +FHG ++ Sbjct: 462 VPGADGVNLDQLIEPEEMAIVKALAFFPEVVEGSAANFEPHRIANYLQELAGLFHGFYNK 521 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R V + +LT RL L+ VA + + LN++G+ +P +M Sbjct: 522 NR-------VITEDSQLTAARLFLLKCVALTLKNALNLLGISAPEKM 561 >gi|256380151|ref|YP_003103811.1| arginyl-tRNA synthetase [Actinosynnema mirum DSM 43827] gi|255924454|gb|ACU39965.1| arginyl-tRNA synthetase [Actinosynnema mirum DSM 43827] Length = 550 Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats. Identities = 190/582 (32%), Positives = 295/582 (50%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 A + ++ ++ ++ L + IERPR+ HG +TN A+ ++ G P Sbjct: 4 AALAELVRATAVDVLSTRGLDPSALPAEVTIERPRNPEHGDYATNVALQTAKKAGTSPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 A + + + + V +AG GF+NL L+P I+ I+ G ++GR+ + G ++ Sbjct: 64 FATWLAEALTSNDALSEVTVAGPGFLNLRLAPDAQAAIVREIITKGEDFGRSDLLAGRRI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A GD L ++A SG +VTREYY NDAGAQI+ S+ Sbjct: 124 NLEFVSANPTGPLHLGGTRWAATGDALGRVLAASGADVTREYYFNDAGAQIDRFVRSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + E+ + L E + + V M Sbjct: 184 AAK------GEPAPEDGYAGSYISDIAAEVLRQEPDALT---AEDGPEVFRRIGVNLMFD 234 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ DL D+F ED H+ + ++ L K + K Sbjct: 235 EIKRDLHDFGTDFDVFFHEDSLHK--SGAVTTAVEKL----------------KGSDKLY 276 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 + RST GDD DR ++KSDG+ Y A D+AY K RGFD IY++G+DH GY Sbjct: 277 FENGAWWLRSTEFGDDKDRVVIKSDGAPAYIAGDIAYLVDKRSRGFDLCIYMLGADHHGY 336 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA+ + + VL+ ++V L DG P++MSKRAG+ I++ +VD VG D+ R Sbjct: 337 IGRLKAAAAALGDDPDSVEVLIGQMVNLVSDGKPVRMSKRAGNIISMEDLVDAVGVDAAR 396 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 F M+ +D D ++++S ENPV+YVQYA++R S+ R A+ + + + L Sbjct: 397 FAMIRASVDSSVDIDLDLLRKRSSENPVYYVQYAHSRICSVLRNAEALKVEANDSL---- 452 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + +E LI L E+PRV++ A +EP+++A YL+ LA H + H Sbjct: 453 ----QLLDSEAEGTLIRALGEFPRVVKAAAELREPHRVATYLHSLAGDLHRWYDHKPALR 508 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L +L RL+L A + +GL ++GV +P M Sbjct: 509 ILPRGDEEPTELHGARLRLCQATQRVFANGLALLGVTAPERM 550 >gi|120602858|ref|YP_967258.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris DP4] gi|166232782|sp|A1VEG5|SYR_DESVV RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|120563087|gb|ABM28831.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris DP4] Length = 551 Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats. Identities = 198/579 (34%), Positives = 318/579 (54%), Gaps = 32/579 (5%) Query: 8 SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 +L L++I + + ++ I+ P+ G L+ N A++L++ G +P +A Sbjct: 4 KKQLLAALQDIVKDMGL--AWPEKATIDTPKATGFGDLAANIALVLAKQAGQNPRELATR 61 Query: 68 IVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 I ++ D D+ ++ IAG GF+N+ S + R+ + +G +G + G G KV +E Sbjct: 62 IADALRNRDADITAIDIAGPGFLNVTYSQDFWRETILRAQEAGSAFGSSDTGAGRKVQVE 121 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 +VSANPTGP+H+GH R A VGD+LA +M F+GY+V+ EYYINDAG Q+ L LSV+ R + Sbjct: 122 YVSANPTGPLHIGHGRGAAVGDSLARIMRFAGYDVSTEYYINDAGRQMRLLGLSVWVRAK 181 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 + L LPE +Y G Y+K + +EL +K LL+ + Y++ +++ I+ Sbjct: 182 E-LAGRPVTLPEDFYRGDYIKDIARELMEKE-PGLLDLDDAAGEDRCFAYAMNSILDGIK 239 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 DL ++H ++ SE G + + L G +E Sbjct: 240 QDLADFRVEHQVWFSERSLVEG--GAVEKTFNRLKEAGLAFE----------------QD 281 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366 L FR+T GDD DR L KSDG+ TYF++D+AY KY+RGFD ++ + G+DH GY+ R Sbjct: 282 GALWFRTTDFGDDKDRVLRKSDGTLTYFSSDIAYHDNKYDRGFDLVVDIWGADHHGYIPR 341 Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 + A AA+ K +V+L +LV L R G + MS RAG F TL VV E G+D+ RFM Sbjct: 342 MRAAVAALGRKPEAFDVVLIQLVNLLRGGELVAMSTRAGQFETLADVVKETGADAARFMF 401 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 L RK+ LDFD VK+++ +NPV+YVQYA+AR S+ R+A + ++ L ++ P Sbjct: 402 LSRKSDSPLDFDLELVKQRTMDNPVYYVQYAHARVCSVLRKAAERGIEMPAQLDGASLAP 461 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 E++L+ L + + A A P+ ++ YL ++A H +++ R Sbjct: 462 LSG---DDEMELLRLLDRFEETVAGAATALAPHHISHYLMEVAGALHSYYA------RQP 512 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A + + + RL L+ AV ++ +GL+++GV +P M Sbjct: 513 ILNATEQDVIVPRLALLRAVGCVLANGLSLLGVSAPESM 551 >gi|220933450|ref|YP_002512349.1| Arginine--tRNA ligase [Thioalkalivibrio sp. HL-EbGR7] gi|254782990|sp|B8GU79|SYR_THISH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|219994760|gb|ACL71362.1| Arginine--tRNA ligase [Thioalkalivibrio sp. HL-EbGR7] Length = 586 Score = 561 bits (1445), Expect = e-157, Method: Composition-based stats. Identities = 199/615 (32%), Positives = 307/615 (49%), Gaps = 61/615 (9%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + ++ + + + + + R +D AHG +TN A+ L++P P Sbjct: 1 MKDQLQALIEQAIDALRQDGTLPGDTAVDVQVTRTKDKAHGDFATNVALQLAKPARKKPR 60 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +AE IVAR+ V IAG GFINL+L ++++I G YGR+ +G G K Sbjct: 61 DVAEAIVARLPASGLVARTEIAGPGFINLFLGEQAKLSVIATIREQGERYGRSQLGAGKK 120 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V +EFVSANPTGP+HVGH R A G +A L+ G++V REYY+NDAG Q++ L SV+ Sbjct: 121 VQVEFVSANPTGPLHVGHGRGAAYGAAVADLLEAVGFDVHREYYVNDAGRQMDILGTSVW 180 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE--------------- 227 RY + L + P Y G Y+ + L ++ E Sbjct: 181 LRYLE-LTGVELPFPTNAYRGDYVYDIAATLHREHGDHYKREAAEILDGLPPDEPDGGDK 239 Query: 228 -----------------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 V + + ++ IRDDL + +D + SE D Sbjct: 240 EEYIDAMIARAKELLGDNHYRFVFELGLNVILDDIRDDLAEFGVTYDTWYSERSL--TDK 297 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + I+ L G++YE L FRST GD+ DR + + +G Sbjct: 298 GAVNLAIERLREAGHLYE----------------KDGALWFRSTDFGDEKDRVVQRDNGQ 341 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFA+D+AY K ERG+D +I V G+DH GYV R++A A+ E + +++VLL + Sbjct: 342 TTYFASDIAYHMDKMERGYDRVIDVWGADHHGYVPRVKAALKALGEDETRLDVLLVQFAI 401 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 LYR G ++MS R+G F+TLR + +EVG D+ RF + R+ + LDFD K QS +NP Sbjct: 402 LYRGGERVQMSTRSGSFVTLRELREEVGKDAARFFYVMRRCEQHLDFDLDLAKSQSADNP 461 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+Y+QYA+AR S+ RQ + D ++ E +++ LA +P VIE Sbjct: 462 VYYIQYAHARVCSVLRQMEAKGLKHDPS---HGEAKLSLLTESHEQEILATLARFPEVIE 518 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A + +EP+++A YL +LA+ FH +++ + + + RL L+ AV +I Sbjct: 519 AAALVEEPHQIANYLRELANDFHTYYNAHQF-------LVDEPAIRDARLSLILAVRQVI 571 Query: 571 NSGLNIIGVESPNEM 585 +GL ++GV +P EM Sbjct: 572 ANGLGLLGVSAPQEM 586 >gi|46579659|ref|YP_010467.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough] gi|81566897|sp|Q72CN5|SYR_DESVH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|46449074|gb|AAS95726.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough] gi|311233457|gb|ADP86311.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris RCH1] Length = 551 Score = 560 bits (1444), Expect = e-157, Method: Composition-based stats. Identities = 198/579 (34%), Positives = 318/579 (54%), Gaps = 32/579 (5%) Query: 8 SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 +L L++I + + ++ I+ P+ G L+ N A++L++ G +P +A Sbjct: 4 KKQLLAALQDIVKDMGL--AWPEKATIDTPKATGFGDLAANIALVLAKQAGQNPRELATR 61 Query: 68 IVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 I ++ D D+ ++ IAG GF+N+ S + R+ + +G +G + G G KV +E Sbjct: 62 IADALRNRDADITAIDIAGPGFLNVTYSQDFWRETILRAQEAGSAFGSSDTGAGRKVQVE 121 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 +VSANPTGP+H+GH R A VGD+LA +M F+GY+V+ EYYINDAG Q+ L LSV+ R + Sbjct: 122 YVSANPTGPLHIGHGRGAAVGDSLARIMRFAGYDVSTEYYINDAGRQMRLLGLSVWVRAK 181 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 + L LPE +Y G Y+K + +EL +K LL+ + Y++ +++ I+ Sbjct: 182 E-LAGRPVTLPEDFYRGDYIKDIARELMEKE-PGLLDLDDAAGEDRCFAYAMSSILDGIK 239 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 DL ++H ++ SE G + + L G +E Sbjct: 240 QDLADFRVEHQVWFSERSLVEG--GAVEKTFNRLKEAGLAFE----------------QD 281 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366 L FR+T GDD DR L KSDG+ TYF++D+AY KY+RGFD ++ + G+DH GY+ R Sbjct: 282 GALWFRTTDFGDDKDRVLRKSDGTLTYFSSDIAYHDNKYDRGFDLVVDIWGADHHGYIPR 341 Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 + A AA+ K +V+L +LV L R G + MS RAG F TL VV E G+D+ RFM Sbjct: 342 MRAAVAALGRKPEAFDVVLIQLVNLLRGGELVAMSTRAGQFETLADVVKETGADAARFMF 401 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 L RK+ LDFD VK+++ +NPV+YVQYA+AR S+ R+A + ++ L ++ P Sbjct: 402 LSRKSDSPLDFDLELVKQRTMDNPVYYVQYAHARVCSVLRKAAERGIEMPAQLDGASLAP 461 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 E++L+ L + + A A P+ ++ YL ++A H +++ R Sbjct: 462 LSG---DDEMELLRLLDRFEETVAGAATALAPHHISHYLMEVAGALHSYYA------RQP 512 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A + + + RL L+ AV ++ +GL+++GV +P M Sbjct: 513 ILNATEQDVIVPRLALLRAVGCVLANGLSLLGVSAPESM 551 >gi|332703861|ref|ZP_08423949.1| Arginyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay] gi|332554010|gb|EGJ51054.1| Arginyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay] Length = 553 Score = 560 bits (1444), Expect = e-157, Method: Composition-based stats. Identities = 215/577 (37%), Positives = 339/577 (58%), Gaps = 30/577 (5%) Query: 10 RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69 LK L+E + + + + +E P+D G L+TNAAMIL++ G P +A + Sbjct: 6 HLKKLLEEAVTTMGL--SLPQGVSLEPPKDIKFGDLATNAAMILAKQAGKPPREVAAELR 63 Query: 70 ARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128 R+ P+++ + +AG GF+N +PS+ + IL ++ G +G +G+ KV +E+V Sbjct: 64 ERLLGSHPEIERIEVAGPGFLNFSFAPSFWQSILQDVLEQGDRFGALDVGQKKKVLVEYV 123 Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188 SANPTGP+H+GH R A +GD+L ++ F+G++VT E+YINDAG Q+ L +S++ RYQQA Sbjct: 124 SANPTGPLHLGHGRGAALGDSLVRVLRFAGFDVTTEFYINDAGRQMRLLGMSIWVRYQQA 183 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248 +N D +LPE Y G Y+K + E+A + SELL PE + + + +++ + +++K I+ D Sbjct: 184 -FNRDVELPEDSYRGEYIKDIAAEIAASHGSELLQVPEAQAMDVCREHGMLSILKWIKRD 242 Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308 L + HDI+ SE D + I L +G YE Sbjct: 243 LNEFRVSHDIWFSERRLV--DTGQVESTIKWLQDKGLAYE----------------QEGA 284 Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368 L F ST GDD DR L +S G TYFA+D+AY KY RG+D ++ + G+DH GYV R++ Sbjct: 285 LWFNSTRFGDDKDRVLRRSSGELTYFASDIAYHADKYSRGYDLLVDIWGADHHGYVPRMK 344 Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428 A A A+ + Q+ V+L ++V + R G I MSKRAG F TL VV EVG DS RFM + Sbjct: 345 AAAQALGKDADQLQVVLVQMVNILRGGEQISMSKRAGTFETLADVVKEVGVDSARFMFMT 404 Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488 RK+ LDFD VK+QS +NPV+YVQYA+AR RS+FR+A++ L + ++ Sbjct: 405 RKSDSHLDFDLELVKQQSMDNPVYYVQYAHARIRSVFRKAREQGLALQPTVDRSKLMAL- 463 Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548 ++QL+ + +P ++ A + P+ ++F+L +LA++ H ++S + + Sbjct: 464 -LDTPEDIQLLKLMEHFPDAVDAAAKSLSPHHISFFLRELAALLHRYYSVH------KVL 516 Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A + +LT+ RL L+ AVA ++ +GL ++GV +P +M Sbjct: 517 GAESSQLTLARLLLLDAVAQVLRNGLQLLGVNAPEQM 553 >gi|126666725|ref|ZP_01737702.1| arginyl-tRNA synthetase [Marinobacter sp. ELB17] gi|126628770|gb|EAZ99390.1| arginyl-tRNA synthetase [Marinobacter sp. ELB17] Length = 578 Score = 560 bits (1444), Expect = e-157, Method: Composition-based stats. Identities = 189/586 (32%), Positives = 299/586 (51%), Gaps = 36/586 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 S L++ L + + + I +D +HG + N A++ ++ G P +AE Sbjct: 22 VSDLLQSALAALQSEGVLPADQNFAPQIGNTKDKSHGDYACNIALVAAKFAGCAPRKLAE 81 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 +VA + VD V IAG GFIN ++S + ++++ + ++GRN GKG KV +E Sbjct: 82 ALVANLPASAAVDKVEIAGPGFINFFMSTASAFGVVNAALEQAEDFGRNHSGKGEKVQVE 141 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+HVGH R A +GD + L+ +GY+VTRE+Y NDAGAQIN L LSV R Sbjct: 142 FVSANPTGPLHVGHGRGAAIGDCICRLLDANGYQVTREFYYNDAGAQINNLGLSVQAR-V 200 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELAD-----KYSSELLNFPEEKWLPIVKDYSVQAM 241 + L + PE Y G Y+ V + + E L + +++V + Sbjct: 201 KGLTPDHQSWPENGYRGDYIADVAEAYLAGKTITADERSVTGQAEPDNLEAITNFAVAYL 260 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 + DLKA ++ D++ E + + + + L GY YE Sbjct: 261 RREQDLDLKAFGVEFDVYFLESSLY--NDGKVEATVKRLQENGYTYE------------- 305 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 D L ++T GDD DR + K+DG YTYF D+AY K++RGF +I G+DH Sbjct: 306 ---DGGALWLKTTEFGDDKDRVMRKTDGGYTYFLPDVAYHLDKWQRGFSTVINEQGADHH 362 Query: 362 GYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 V R+ A A+ + + +L ++V + R G +K+SKRAG ++TL +++EVG Sbjct: 363 STVTRVRAGLQALNIGIPEGWPDYVLHQMVMVTRGGEEVKLSKRAGSYVTLSDLIEEVGR 422 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ RF + R+ L FD + Q+ ENPV+Y+QYA+AR S+ R+ Sbjct: 423 DATRFFLAARRVDSQLTFDIDLARSQTNENPVYYIQYAHARICSVLRKLAVEGVQRGR-- 480 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 ++ E +L LA+YP ++ +A +EP+ L+ YL +LA +FH +++ Sbjct: 481 -HESLGDLTLLTLDEEKELANQLAKYPELVASAAAQREPHTLSQYLRELAGLFHSYYNAH 539 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V + L R+ L AV +I +GL+++GV +P EM Sbjct: 540 K-------VLIEDTALRDARISLYLAVRQVIENGLDLLGVSAPEEM 578 >gi|51891157|ref|YP_073848.1| arginyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863] gi|81389886|sp|Q67TI9|SYR_SYMTH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|51854846|dbj|BAD39004.1| arginyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863] Length = 558 Score = 560 bits (1444), Expect = e-157, Method: Composition-based stats. Identities = 189/589 (32%), Positives = 314/589 (53%), Gaps = 35/589 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKIL---DRIVIERPRDCAHGHLSTNAAMILSRPL 57 M + S ++ L + + ++ + +E P+ HG +TN AM+++R Sbjct: 1 MRIVEQIKSEIRQALADAVSRAVAAGALVGPAPEVFLETPKAREHGDFATNLAMVMARQE 60 Query: 58 GLDPLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116 P IA+ IV ++ + +S IAG GFINL L ++ ++L +I G +YG++ Sbjct: 61 KKAPRVIAQAIVDHLQTEGTWIESAEIAGPGFINLRLRQGWVHQVLPAIQAEGADYGKSD 120 Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176 G ++ +E+VSANPTGPM + R G +LA L+ ++GYE E+Y+NDAG Q+ Sbjct: 121 HGGKQRILLEYVSANPTGPMVLVQARAGAFGSSLARLLNWAGYECHTEFYVNDAGNQVKI 180 Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236 LA +V R Q+ L ++PEGYYPG + + L ++Y L PEE+ L ++ + Sbjct: 181 LARTVDLRAQE-LRGATVEIPEGYYPGEDVIDCARALLEQYPD-FLEKPEEERLAFLERW 238 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 + + L++ ++ D + SE + +++ L +G YE Sbjct: 239 APEYFRSGHERVLRSYGVEFDRWFSERSL--REAGAPARLVEWLKERGEAYE-------- 288 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + R+T GDD DR L+KSDG YTYFAAD Y K KY+RG+ +I ++ Sbjct: 289 --------KDGAVWMRTTAYGDDKDRVLVKSDGEYTYFAADACYHKDKYDRGYATLIDIL 340 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G DH GY+ R++A+ + + + +L ++VRL++DG +MSKR G+++TL ++++ Sbjct: 341 GQDHHGYLGRMKAMVECLGHPRDSLEILFTQMVRLFKDGQEFRMSKRRGNYVTLEDLLEQ 400 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 V D+ R+ L R +DFD +S +NPVFYVQYA+AR SI RQA++ Sbjct: 401 VSVDAARYFFLMRSLDTHMDFDLDLANLKSSDNPVFYVQYAHARICSILRQAREQG---- 456 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 ++ + + D SE++L+ LAE+P I A A+E +++ YL +LA++FH + Sbjct: 457 LEVPAASEVDTALLADESEVELMRKLAEFPEEIIGAADAREVHRIPRYLNELATLFHQFY 516 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 S R V +++ L+ RL LV +++ + L I+GV +P M Sbjct: 517 SRCR-------VVSDDVPLSRARLLLVDCTRTVLANALGILGVSAPERM 558 >gi|169351390|ref|ZP_02868328.1| hypothetical protein CLOSPI_02170 [Clostridium spiroforme DSM 1552] gi|169291612|gb|EDS73745.1| hypothetical protein CLOSPI_02170 [Clostridium spiroforme DSM 1552] Length = 553 Score = 560 bits (1444), Expect = e-157, Method: Composition-based stats. Identities = 205/581 (35%), Positives = 324/581 (55%), Gaps = 35/581 (6%) Query: 7 FSSRLKNYLK-EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 + LKN LK I + VE + I+IE PRD HG STN AM L++ L +P IA Sbjct: 6 IEATLKNVLKKAIISRGFVEDYDQENIIIEIPRDKTHGDYSTNLAMQLTKLLKRNPREIA 65 Query: 66 ELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 IV I K +++ + IAG GFINL+L+ + I+ ++ YG++ G G K N Sbjct: 66 TAIVEAIDKETANIEKIEIAGPGFINLFLAKDAMTSIIKEVLDEKENYGKSNYGNGIKYN 125 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTG +H+GH + A VGD++ +M +GY+VTREYYINDAG QI+ LALS++ R Sbjct: 126 VEFVSANPTGDLHLGHAKGAAVGDSICRIMEAAGYDVTREYYINDAGNQIHNLALSLYAR 185 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 YQQA + + +PE Y G + + ++ + + L PE+K + + + ++ Sbjct: 186 YQQA-FGKEVTMPEDGYHGKDIIDIANKIKEIEGDKYLGLPEDKAIAYFRAKGTEYELQK 244 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 I+D L + D++ SE + + + + I+ L GY YE Sbjct: 245 IKDILNEFRVSFDVWFSETSLY--EENKVVPTIEKLKEAGYTYE---------------- 286 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 + L F+ST GDD +R L+KSDGSYTY D+AY K +RG++ ++ ++G+DH GY+ Sbjct: 287 EDGALWFKSTEFGDDKNRVLIKSDGSYTYLTPDIAYHLNKLDRGYEYLVDLLGADHHGYI 346 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 R++A A+ Q+N+ + ++VR+ +G P+KMSKR G+ +T++ +++E+G D+ R+ Sbjct: 347 NRMKAAIQALGYNADQLNIDIIQMVRMMNNGEPVKMSKRTGNAVTIKDLIEEIGVDATRY 406 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 + + + DFD K S ENPV+Y QYA+AR SI QA D Sbjct: 407 FFVSKAANTPFDFDIGLAKSHSNENPVYYAQYAHARMCSIKTQADKAKIDYSDKF----- 461 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 + + E++L+ H+ E+ VI ++ I + P+K+A Y+ LA +FH ++ Sbjct: 462 ---DLLVNNKEIELVKHINEFRNVIVDSAINRAPHKIANYIQRLAQLFHSFYNECY---- 514 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + NN +L+ RL LV A + + LN+IGV +P +M Sbjct: 515 --VIDENNIELSKQRLSLVEATRITMANALNLIGVSAPEKM 553 >gi|220917531|ref|YP_002492835.1| arginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1] gi|254782939|sp|B8JBE2|SYR_ANAD2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|219955385|gb|ACL65769.1| arginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1] Length = 598 Score = 560 bits (1443), Expect = e-157, Method: Composition-based stats. Identities = 230/596 (38%), Positives = 344/596 (57%), Gaps = 28/596 (4%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDR---IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 R+ ++ + + + +E PRD HG + NAAM+L++ G P Sbjct: 2 VRDRVIELFRKALAQGADDGRWPAAGAGFSVEAPRDPKHGDFAVNAAMVLAKQAGRPPRE 61 Query: 64 IAELIVARI---KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 +A+ IV + D+ + IAG GFIN+ LSP + L+ V G +YGR +G+G Sbjct: 62 LAQAIVEAVRAADTAGDLAGLEIAGPGFINVRLSPDLWLRTLARAVAEGPDYGRTAVGQG 121 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KV +E+VSANPTGPMHVGH R AVVGD + L+ ++G++VTREYY+ND GAQ+ TLA S Sbjct: 122 KKVIVEYVSANPTGPMHVGHGRNAVVGDGVQGLLRWAGFDVTREYYVNDYGAQVQTLARS 181 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V RYQ+ L+ +P YPG Y+K + L +Y + L+ PE +WL + +D+SVQ Sbjct: 182 VHLRYQE-LHGRTVTMPPKSYPGEYVKDIAAGLKAEYGARFLDAPEAEWLTLFRDHSVQH 240 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT-- 298 ++ +IR DL A+NI D + SE + + + + L + VY G LPPPKSK Sbjct: 241 VLGMIRGDLAAVNISFDRWSSEKALY--ESGTVDRFLRFLEEKDLVYVGKLPPPKSKKGQ 298 Query: 299 --------TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350 + LFRS+ GD+VDRP+ K+DG+ TYF AD+AY K +R D Sbjct: 299 PPPQPQPDEEGVTAAEDLTLFRSSAYGDEVDRPVKKADGTPTYFCADIAYHWDKRQR-AD 357 Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 ++ V+G+DH GYV RLEA A+ + ++V+L ++V L R G +KMSKRAG ++L Sbjct: 358 ALVDVLGADHGGYVPRLEAAMEALGASRKDLHVVLIQMVSLMRGGESVKMSKRAGTLVSL 417 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R VVDEVG D+ RF+ L R++ LDFD K Q+ +NPVFYVQY +AR +IF++A++ Sbjct: 418 REVVDEVGRDATRFIFLTRRSDAPLDFDVELAKRQTLDNPVFYVQYGHARLAAIFQKARE 477 Query: 471 IFPDL-DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 + DFDL + E LI +A +P ++ A +A EP+++AFYL + Sbjct: 478 AGHAVPDFDLEAARTLA-----SPEEQDLIRRIAAFPDMLAAAALAYEPHRVAFYLQETI 532 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + FH ++ G+++ V + T RL L A+ ++ +GL ++GV +P+ M Sbjct: 533 AAFHSWYTQGKKSGEK--VIGPDPVKTAARLFLCRALKQVLANGLAVLGVSAPDRM 586 >gi|78043915|ref|YP_358996.1| arginyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901] gi|109894979|sp|Q3AFT8|SYR_CARHZ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|77996030|gb|ABB14929.1| arginyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901] Length = 557 Score = 560 bits (1443), Expect = e-157, Method: Composition-based stats. Identities = 197/585 (33%), Positives = 320/585 (54%), Gaps = 31/585 (5%) Query: 2 YLFADFSSRLKNYLKEIDCKIK-VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 YL + + L+ K ++ + +E+P++ AHG L+TN AM+L++ + Sbjct: 3 YLLQRITGEIAGSLRRAAVKAGYLDAEDELAFELEKPKEKAHGDLATNLAMLLTKKARKN 62 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P IA ++ ++I V+ V IAG GFIN Y ++ ++ I+ G +YGR IG G Sbjct: 63 PREIAATLLEYLEIPAVVERVEIAGPGFINFYFKKDWVVAVIPEILSFGEKYGRLAIGAG 122 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +V +EFVSANPTG +H+G+ R A +GD LA+++ +GYEV+REYYINDAG QI S Sbjct: 123 KRVQVEFVSANPTGLLHMGNGRGAALGDILANILTEAGYEVSREYYINDAGNQIENFNKS 182 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V RY + L + PE Y G + + + ++ ++ PE++ + +++ Sbjct: 183 VEARYLELL-GYKVEFPEEGYHGEDIIDTARNIVARFGDRFIHLPEKERQEALGKIALEE 241 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 ++ I+ L+ +++D++ SE H + + + L +GY+YE Sbjct: 242 KLQSIKKSLENFGVKYDVWFSERSLH--ESGEVEKTVKLLLERGYLYE------------ 287 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 L F ++ +G++ D L++ +G TY+AAD+AY K K++RGFD +I + G+DH Sbjct: 288 ----KDGALWFAASKLGEEKDEVLVRKNGVPTYYAADIAYHKNKFDRGFDLVINIWGADH 343 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 G+V R++ A+ ++ V+L +LVRL++ G ++MSKR G +ITL +V+EVG D Sbjct: 344 HGHVSRMKTALKALGYDPERLIVILMQLVRLFQGGELVRMSKRTGQYITLDELVEEVGVD 403 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 + R+ + R + LDFD KE+S ENPV+Y+QYA+AR S++RQ + L Sbjct: 404 AARYFFVMRSHDAHLDFDLDLAKEKSNENPVYYIQYAHARIMSLYRQCNEQG----VTLP 459 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 P + +EL L+ HLAE+P IE A P+ LA YL++LA FH ++ R Sbjct: 460 PVEDVDLAILSSEAELNLLRHLAEFPVEIEKCATALAPHHLARYLHELAGYFHTFYNSCR 519 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V L+ RL LV A ++ GL ++GV +P +M Sbjct: 520 -------VLGVEENLSKARLLLVEATRIVLRKGLKMLGVSAPEKM 557 >gi|258422795|ref|ZP_05685698.1| arginyl-tRNA synthetase [Staphylococcus aureus A9635] gi|257847026|gb|EEV71037.1| arginyl-tRNA synthetase [Staphylococcus aureus A9635] Length = 553 Score = 560 bits (1443), Expect = e-157, Method: Composition-based stats. Identities = 196/586 (33%), Positives = 310/586 (52%), Gaps = 34/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L + K + +I D I IE P+D +G +TN AM+L++ + Sbjct: 1 MNIIDQVKQTLVEEIAASINKAGLADEIPD-IKIEVPKDTKNGDYATNIAMVLTKIAKRN 59 Query: 61 PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ IV + + + IAG GFIN YL YL I+ + G ++G K Sbjct: 60 PREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G V +E+VSANPTG +H+GH R A VGD LA+++ +GY VTREYYINDAG QI LA Sbjct: 120 GQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ R+ +AL +N +PE Y G + +GK+LA+K+ E+ ++ EE L + V+ Sbjct: 180 SIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKH-PEIKDYSEEARLKEFRKLGVE 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M +++DL N D + SE + + I +++ + GY YE Sbjct: 239 YEMAKLKNDLAEFNTHFDNWFSETSLY--EKGEILEVLAKMKELGYTYEA---------- 286 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 R+T DD DR L+K+DG+YTYF D+AY K +RG D +I + G+D Sbjct: 287 ------DGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A ++ + + ++VRL +G +KMSKR G+ ITLR ++DEVG Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGV 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R DFD KEQS++NPV+Y QYA+AR SI +QAK+ ++ Sbjct: 401 DAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEVTAAN 460 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + ++L+ +A++ IE+A + +++ Y+ DLA+ FH ++ Sbjct: 461 DFTTI------TNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLAAHFHKFYNAE 514 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ + T + ++ AV + + L ++GV +P M Sbjct: 515 K-------VLTDDIEKTKAHIAMIEAVRITLKNALAMVGVSAPESM 553 >gi|224370238|ref|YP_002604402.1| arginyl-tRNA synthetase [Desulfobacterium autotrophicum HRM2] gi|259511641|sp|C0QKZ8|SYR_DESAH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|223692955|gb|ACN16238.1| ArgS [Desulfobacterium autotrophicum HRM2] Length = 555 Score = 560 bits (1443), Expect = e-157, Method: Composition-based stats. Identities = 201/579 (34%), Positives = 314/579 (54%), Gaps = 28/579 (4%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + + K ++ + IE PR AHG STN AM+ + + P IAE Sbjct: 5 IKQLILGGARRAFDKGLLKSDEFPGMEIEAPRHEAHGDFSTNFAMVSAATQKMAPRKIAE 64 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 +++ + D ++ IAG GFIN +L+ L IV +G + G G KV +E Sbjct: 65 AVISCMDSDSVIEKTEIAGPGFINFFLANRAWYPTLDRIVKEDDRFGSSDFGAGKKVQVE 124 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+HVGH R A VGD +A++++F+G++V REYYIND+G QI TL LSV+ R Sbjct: 125 FVSANPTGPLHVGHARGAAVGDAVANILSFAGFDVQREYYINDSGRQIRTLGLSVWLRLC 184 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 Q L + + P Y G Y+K + +L K EL E + + I ++ Q ++ IR Sbjct: 185 QQL-GREVEFPTDCYQGDYIKEIAADLHGKMGRELSEKDEAEAVSICAKFAAQVILSGIR 243 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 DL A +++D + SE+ + ++ I+ + +YE Sbjct: 244 ADLVAFGVEYDQWFSEESLYA--SGRVQKAIEEFKARDVIYE----------------KD 285 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366 FR+ GD+ DR +++++G TYFA+D+AY K++RGFD +I V G+DH GY+ R Sbjct: 286 GAQWFRTERYGDEKDRVVVRNNGITTYFASDIAYHMEKFDRGFDRVIDVWGADHHGYINR 345 Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 + A A + Q +V+L +LV L R+G P+ MS R+G+F+TL+ +VDEVG D+ RF+ Sbjct: 346 INAAIDASGRQSDQFDVILVQLVNLLRNGQPVAMSSRSGEFVTLKDIVDEVGKDAARFLF 405 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 L R LDFD K+++ +NPV+YVQY +AR I +A + + + Sbjct: 406 LSRSYDSGLDFDLEVAKQKTSDNPVYYVQYVHARIAGILMKA--VSEKVLNEAEKPGAGN 463 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 +E + E+ L+ LA +P +E + P+ + YL LAS FHG+++ + Sbjct: 464 RELLVEPEEINLLKILAAFPETVEKSAATLHPHVIFTYLMGLASAFHGYYNRHK------ 517 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V +R+L+ R+ LV AV ++I +GLN++GV +P M Sbjct: 518 -VITPDRELSRGRISLVFAVKTVIRNGLNLLGVSAPERM 555 >gi|21282300|ref|NP_645388.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2] gi|57650073|ref|YP_185547.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL] gi|87162053|ref|YP_493299.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88194381|ref|YP_499174.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151220791|ref|YP_001331613.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. Newman] gi|161508858|ref|YP_001574517.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221141554|ref|ZP_03566047.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253732951|ref|ZP_04867116.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130] gi|258450930|ref|ZP_05698982.1| arginyl-tRNA synthetase [Staphylococcus aureus A5948] gi|262049698|ref|ZP_06022565.1| arginyl-tRNA synthetase [Staphylococcus aureus D30] gi|262051928|ref|ZP_06024142.1| arginyl-tRNA synthetase [Staphylococcus aureus 930918-3] gi|282921898|ref|ZP_06329596.1| arginyl-tRNA synthetase [Staphylococcus aureus A9765] gi|284023632|ref|ZP_06378030.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132] gi|294849263|ref|ZP_06790006.1| arginyl-tRNA synthetase [Staphylococcus aureus A9754] gi|297208668|ref|ZP_06925096.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300912759|ref|ZP_07130201.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70] gi|304381781|ref|ZP_07364429.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|23822182|sp|Q8NXT8|SYR_STAAW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|71153571|sp|Q5HI60|SYR_STAAC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|109895038|sp|Q2FJ29|SYR_STAA3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|123291835|sp|Q2G0F8|SYR_STAA8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|172048787|sp|A6QER9|SYR_STAAE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|189083553|sp|A8Z117|SYR_STAAT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|21203737|dbj|BAB94436.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2] gi|57284259|gb|AAW36353.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL] gi|87128027|gb|ABD22541.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87201939|gb|ABD29749.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150373591|dbj|BAF66851.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. Newman] gi|160367667|gb|ABX28638.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253729131|gb|EES97860.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130] gi|257861350|gb|EEV84159.1| arginyl-tRNA synthetase [Staphylococcus aureus A5948] gi|259160185|gb|EEW45215.1| arginyl-tRNA synthetase [Staphylococcus aureus 930918-3] gi|259162241|gb|EEW46816.1| arginyl-tRNA synthetase [Staphylococcus aureus D30] gi|269940186|emb|CBI48563.1| putative arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20] gi|282593751|gb|EFB98742.1| arginyl-tRNA synthetase [Staphylococcus aureus A9765] gi|294823795|gb|EFG40221.1| arginyl-tRNA synthetase [Staphylococcus aureus A9754] gi|296886613|gb|EFH25518.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300885863|gb|EFK81066.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70] gi|302750507|gb|ADL64684.1| putative arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304339732|gb|EFM05678.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|315196545|gb|EFU26894.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01] gi|320140058|gb|EFW31919.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA131] gi|329313330|gb|AEB87743.1| Arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131] gi|329729920|gb|EGG66312.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189] Length = 553 Score = 559 bits (1442), Expect = e-157, Method: Composition-based stats. Identities = 197/586 (33%), Positives = 310/586 (52%), Gaps = 34/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L + K + +I D I IE P+D +G +TN AM+L++ + Sbjct: 1 MNIIDQVKQTLVEEIAASINKAGLADEIPD-IKIEVPKDTKNGDYATNIAMVLTKIAKRN 59 Query: 61 PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ IV + + + IAG GFIN YL YL I+ + G ++G K Sbjct: 60 PREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G V +E+VSANPTG +H+GH R A VGD LA+++ +GY VTREYYINDAG QI LA Sbjct: 120 GQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ R+ +AL +N +PE Y G + +GK+LA+K+ E+ ++ EE L + V+ Sbjct: 180 SIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKH-PEIKDYSEEARLKEFRKLGVE 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M +++DL N D + SE + + I +++ + GY YE Sbjct: 239 YEMAKLKNDLAEFNTHFDNWFSETSLY--EKGEILEVLAKMKELGYTYEA---------- 286 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 R+T DD DR L+K+DG+YTYF D+AY K +RG D +I + G+D Sbjct: 287 ------DGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A ++ + + ++VRL +G +KMSKR G+ ITLR ++DEVG Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGV 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R DFD KEQS++NPV+Y QYA+AR SI +QAK+ ++ Sbjct: 401 DAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEVTAAN 460 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + ++L+ +A++ IE+A + +++ Y+ DLAS FH ++ Sbjct: 461 DFTTI------TNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLASHFHKFYNAE 514 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ + T + ++ AV + + L ++GV +P M Sbjct: 515 K-------VLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM 553 >gi|320141851|gb|EFW33679.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA177] Length = 553 Score = 559 bits (1442), Expect = e-157, Method: Composition-based stats. Identities = 198/586 (33%), Positives = 311/586 (53%), Gaps = 34/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L + K + +I D I IE P+D +G +TN AM+L++ + Sbjct: 1 MNIIDQVKQTLVEEIAASINKAGLADEIPD-IKIEVPKDTKNGDYATNIAMVLTKIAKRN 59 Query: 61 PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ IV + + + IAG GFIN YL YL I+ + G ++G K Sbjct: 60 PREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G V +E+VSANPTG +H+GH R A VGD LA+++ +GY VTREYYINDAG QI LA Sbjct: 120 GQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ R+ +AL +N +PE Y G + +GK+LA+K+ SE+ ++ EE L + V+ Sbjct: 180 SIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKH-SEIKDYSEEARLKEFRKLGVE 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M +++DL N D + SE + + I +++ + GY YE Sbjct: 239 YEMAKLKNDLAEFNTHFDNWFSETSLY--EKGEILEVLAKMKELGYTYEA---------- 286 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 R+T DD DR L+K+DG+YTYF D+AY K +RG D +I + G+D Sbjct: 287 ------DGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A ++ + + ++VRL +G +KMSKR G+ ITLR ++DEVG Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGV 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R DFD KEQS++NPV+Y QYA+AR SI +QAK+ ++ Sbjct: 401 DAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEVTAAN 460 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + ++L+ +A++ IE+A + +++ Y+ DLAS FH ++ Sbjct: 461 DFTTI------TNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLASHFHKFYNAE 514 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ + T + ++ AV + + L ++GV +P M Sbjct: 515 K-------VLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM 553 >gi|306781626|ref|ZP_07419963.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu002] gi|306784014|ref|ZP_07422336.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu003] gi|306788377|ref|ZP_07426699.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu004] gi|306792704|ref|ZP_07431006.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu005] gi|306797110|ref|ZP_07435412.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu006] gi|306802990|ref|ZP_07439658.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu008] gi|306807180|ref|ZP_07443848.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu007] gi|306967379|ref|ZP_07480040.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu009] gi|308325587|gb|EFP14438.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu002] gi|308331249|gb|EFP20100.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu003] gi|308335065|gb|EFP23916.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu004] gi|308338873|gb|EFP27724.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu005] gi|308342558|gb|EFP31409.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu006] gi|308346421|gb|EFP35272.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu007] gi|308350364|gb|EFP39215.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu008] gi|308354993|gb|EFP43844.1| arginyl-tRNA synthetase argS [Mycobacterium tuberculosis SUMu009] Length = 550 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 195/582 (33%), Positives = 295/582 (50%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LK + + ++ L + + +ERPR HG ++N AM L+ +G +P Sbjct: 4 ADLAELLKATAAAVLAERGLDASALPQMVTVERPRIPEHGDYASNLAMQLANKVGTNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + + S +AG GFIN+ L + K+++S++ +G YG +L+ G KV Sbjct: 64 LAGWLAEALTKVDGIASAEVAGPGFINMRLETAAQAKVVTSVIDAGHSYGHSLLLAGRKV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L+ G +V REYY ND GAQI+ A S+ Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLTTQGADVVREYYFNDHGAQIDRFANSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + P+ Y G Y+ ++ +++ K L+ P+ + + V M Sbjct: 184 AAK------GEPTPQDGYAGSYITNIAEQVLQKAPDA-LSLPDAELRETFRAIGVDLMFD 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L D++ ED H G + + I L G +YE Sbjct: 237 HIKQSLHEFGTDFDVYTHEDSMHTG--GRVENAIARLRETGNIYE--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 R++ GDD DR ++KSDG Y A DLAY+ K +RGFD IY++G+DH GY Sbjct: 280 -KDGATWLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA + A + VL+ ++V L RDG P++MSKRAG +TL +V+ +G D+ R Sbjct: 339 IARLKAAAAAFGDDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVLTLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D S ENP +YVQYA+AR ++ R A ++ D + Sbjct: 399 YSLIRSSVDTAIDIDLALWSSASNENPAYYVQYAHARLSALARNAAELALIPDTNHL--- 455 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 E E L+ L E+PRV+E A +EP+++ YL DLA +H + R P Sbjct: 456 ----ELLNHDKEGTLLRTLGEFPRVLETAASLREPHRVCRYLEDLAGDYHRFYDSCRVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L RL L A +I +GL IIGV +P M Sbjct: 512 QG---DEQPTDLHTARLALCQATRQVIANGLAIIGVTAPERM 550 >gi|297539933|ref|YP_003675702.1| arginyl-tRNA synthetase [Methylotenera sp. 301] gi|297259280|gb|ADI31125.1| arginyl-tRNA synthetase [Methylotenera sp. 301] Length = 551 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 193/587 (32%), Positives = 303/587 (51%), Gaps = 44/587 (7%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + L L I E + I++ERP+ HG +TN A++L++PL +P IA Sbjct: 1 MKTHLTQLLTAAAKTIAPEFE--ATILLERPKSAEHGDFATNLALVLAKPLKQNPRAIAA 58 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 I+ + + IAG GFIN +L+ + +++ I+ +G YGRN IG G KV +E Sbjct: 59 QIIEALPASDYIAKTEIAGAGFINFFLNAQSQQAVVTDILKAGENYGRNNIGSGQKVQLE 118 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+HVGH R A VGD LA L+ +G++VTRE+Y NDAGAQI+ L +SV R Sbjct: 119 FVSANPTGPLHVGHGRGAAVGDCLARLLDANGWDVTREFYYNDAGAQIDNLTISVLARC- 177 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEK-----WLPIVKDYSVQAM 241 + + +D+ PE Y G Y+ + +K + + V+ ++V + Sbjct: 178 KGIPTDDASFPENGYRGDYIMDIANAFLNKETVTADDMQVTANGDITDEDAVRTFAVAYL 237 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 DLKA I+ D+F E + + + + L + G+ Y+ Sbjct: 238 RHEQDLDLKAFQIKFDVFSLESALY--SEGKVEETVQALIKSGHTYDL------------ 283 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 L ++T GDD DR + KS+G YTYF D+AY K++RGF +I G+DH Sbjct: 284 ----DGALWLKTTDFGDDKDRVMRKSEGGYTYFVPDVAYHAEKWKRGFVRVINEQGADHH 339 Query: 362 GYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 + R+ A A+ + +L ++V + R G +K+SKRAG ++TLR +++EVG Sbjct: 340 STITRVRAGLQALDAGIPSGWPDYVLHQMVTVMRGGEEVKLSKRAGSYVTLRDLIEEVGC 399 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFD 478 D+ R+ + R++ L FD + Q+ +NPVFY+QYA+AR S+ Q + L D D Sbjct: 400 DATRYFLAARRSDSQLVFDIDLARAQTNDNPVFYIQYAHARICSVLAQWGGVAAQLNDVD 459 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L P N + E L+ L+ YP + NA P+ +A YL DLAS H +++ Sbjct: 460 LSPLN--------NPHETALMQRLSSYPETVANAATELAPHVIANYLKDLASDLHSYYNE 511 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + + RL L+ A ++ +GL ++GV +P +M Sbjct: 512 YKF-------LIEDETVKLARLSLISATQQVLKNGLGLLGVSAPEKM 551 >gi|282915944|ref|ZP_06323709.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139] gi|283769772|ref|ZP_06342664.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19] gi|282320240|gb|EFB50585.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139] gi|283459919|gb|EFC07009.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19] Length = 553 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 197/586 (33%), Positives = 310/586 (52%), Gaps = 34/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L + K + +I D I IE P+D +G +TN AM+L++ + Sbjct: 1 MNIIDQVKQTLVEEIAASINKAGLADEIPD-IKIEVPKDTKNGDYATNIAMVLTKIAKRN 59 Query: 61 PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ IV + + + IAG GFIN YL YL I+ + G ++G K Sbjct: 60 PREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G V +E+VSANPTG +H+GH R A VGD LA+++ +GY VTREYYINDAG QI LA Sbjct: 120 GQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ R+ +AL +N +PE Y G + +GK+LA+K+ E+ ++ EE L + V+ Sbjct: 180 SIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKH-PEIKDYSEEARLKEFRKLGVE 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M +++DL N D + SE + + I +++ + GY YE Sbjct: 239 YEMAKLKNDLAEFNTHFDNWFSETSLY--EKGEILEVLAKMKELGYTYEA---------- 286 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 R+T DD DR L+K+DG+YTYF D+AY K +RG D +I + G+D Sbjct: 287 ------DGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A ++ + + ++VRL +G +KMSKR G+ ITLR ++DEVG Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGV 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R DFD KEQS++NPV+Y QYA+AR SI +QAK+ ++ Sbjct: 401 DAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEV---- 456 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + ++L+ +A++ IE+A + +++ Y+ DLAS FH ++ Sbjct: 457 --AATNDFTTITNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLASHFHKFYNAE 514 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ + T + ++ AV + + L ++GV +P M Sbjct: 515 K-------VLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM 553 >gi|108800862|ref|YP_641059.1| arginyl-tRNA synthetase [Mycobacterium sp. MCS] gi|119870002|ref|YP_939954.1| arginyl-tRNA synthetase [Mycobacterium sp. KMS] gi|123368893|sp|Q1B531|SYR_MYCSS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|166232810|sp|A1UK06|SYR_MYCSK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|108771281|gb|ABG10003.1| arginyl-tRNA synthetase [Mycobacterium sp. MCS] gi|119696091|gb|ABL93164.1| arginyl-tRNA synthetase [Mycobacterium sp. KMS] Length = 550 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 191/582 (32%), Positives = 287/582 (49%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + L+ + + ++ L + +ERPR+ HG +TN A+ + + +G++P Sbjct: 4 ADLADLLRTTATAVLTERDLDTAALPATVTVERPRNPEHGDYATNLALQVGKKVGVNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + + S +AG GF+NL + + I+ I+ S YG + + Sbjct: 64 LAGWLAEALTATAGIASAEVAGPGFVNLRIEAAAQNVIVGDIITSAERYGHSAALAERNI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L+A G V REYY ND GAQI+ S+ Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLATQGAAVVREYYFNDHGAQIDRFVSSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + ++ K L P+++ + V M Sbjct: 184 AAK------GEPTPEDGYAGSYIGDIAAQVLAK-DPGALELPDDEMRETFRAIGVDLMFD 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L D+F ED H + + I L G +YE Sbjct: 237 HIKISLHDFGTDFDVFTHEDSMHT--SGRVEEAIARLRENGAIYE--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 R+T GDD DR ++KSDG+ Y A DLAYF K +RGFD IY++G+DH GY Sbjct: 280 -KDGATWLRTTDFGDDKDRVVIKSDGAPAYIAGDLAYFLDKRQRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA+ + + V++ ++V L RDG P++MSKRAG ITL +V+ +G D+ R Sbjct: 339 IARLKAAAAALGDDPDTVEVMIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D S ENPV+YVQYA+AR ++ R A D+ D Sbjct: 399 YSLIRSSVDTPIDIDLALWSSASNENPVYYVQYAHARLSALARNAADLGVVAD------- 451 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + E LI +L E+PRV+E+A +EP+++ YL DLA +H + R P Sbjct: 452 TAHLDLLTHDKEGTLIRNLGEFPRVLESAAALREPHRVCRYLEDLAGDYHRFYDSCRVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L RL L A +I +GL I+GV +P M Sbjct: 512 QG---DEAPGSLHQARLALCQATRQVIANGLAILGVSAPERM 550 >gi|148259959|ref|YP_001234086.1| arginyl-tRNA synthetase [Acidiphilium cryptum JF-5] gi|146401640|gb|ABQ30167.1| arginyl-tRNA synthetase [Acidiphilium cryptum JF-5] Length = 596 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 256/597 (42%), Positives = 366/597 (61%), Gaps = 18/597 (3%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 +F + + + ++ ++ RI + R+ AHG ++TNAA+I ++PLG P Sbjct: 4 NIFTALRRLILAEMARLFPA--LDAEVQARIEVSPTREAAHGDMATNAALIAAKPLGRPP 61 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 IA + A + PD+ AG GF+NL L+ +++I+ +G +G + +G+G Sbjct: 62 REIATALAAALSALPDIAKAEPAGPGFVNLTLADPVWHAEIAAILRAGEAFGASAMGQGR 121 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 +VN+E+VSANPTGP+ VGHCR AVVGD LASL+A +GY+VTREYYINDAGAQ+ LA SV Sbjct: 122 RVNVEYVSANPTGPLTVGHCRGAVVGDALASLLAKAGYDVTREYYINDAGAQVTALAWSV 181 Query: 182 FWRYQQALYNNDSD------LPEGY-YPGVYLKHVGKELADKYSSELLN-----FPEEKW 229 +WRY QAL ++ P G YPG YL V + L + L P E W Sbjct: 182 YWRYLQALGTQLTEQDFAAATPTGLQYPGDYLIPVAEALVAAHGDALAGPGLSIAPAEAW 241 Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 L V+ +++++MM +IR+DL ALN++ D+F SE + L Q +YEG Sbjct: 242 LDTVRRHAIESMMALIREDLAALNVRQDVFTSEAALIA--AGGVERAEAILRGQDLLYEG 299 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349 +L PPK KT + + R+Q LFR+T GDDVDRP+ KSDGS TYF D+A K RGF Sbjct: 300 VLEPPKGKTPEDWE-PREQTLFRATGFGDDVDRPVRKSDGSNTYFFNDIANHADKMARGF 358 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 D MI V G+DH GYVKR++A A++ + A ++++LC++VR+ +DG P++MSKRAG +I Sbjct: 359 DTMIDVWGADHGGYVKRMQAAVKALAAGRDASLDIVLCQIVRVMKDGTPMRMSKRAGTYI 418 Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 LR ++D VG D VRF+ML RK+ ++FD Q++ENPVFYVQYA+ARCRS+ R A Sbjct: 419 ELRDLIDAVGPDVVRFIMLMRKSDAQMEFDLDAAVAQTRENPVFYVQYAHARCRSVLRAA 478 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 ++ D S EL L+ LA +PR++E+A A+EP+++ F+LYDL Sbjct: 479 AEMPELGDTADAALAEAALASLTAPEELALVRRLAAWPRLVESAAQAREPHRIGFFLYDL 538 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A FH W+ GR + LRF+QA+ + + RL LV A A +I SGL ++GV EM Sbjct: 539 AGDFHALWNAGRADATLRFIQADAVEASRARLALVAATAVVIRSGLAVMGVAPVEEM 595 >gi|298693939|gb|ADI97161.1| Arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133] Length = 553 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 197/586 (33%), Positives = 310/586 (52%), Gaps = 34/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L + K + +I D I IE P+D +G +TN AM+L++ + Sbjct: 1 MNIIDQVKQTLVEEIAASINKAGLADEIPD-IKIEVPKDTKNGDYATNIAMVLTKIAKRN 59 Query: 61 PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ IV + + + IAG GFIN YL YL I+ + G ++G K Sbjct: 60 PREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGYVNESK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G V +E+VSANPTG +H+GH R A VGD LA+++ +GY VTREYYINDAG QI LA Sbjct: 120 GQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ R+ +AL +N +PE Y G + +GK+LA+K+ E+ ++ EE L + V+ Sbjct: 180 SIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKH-PEIKDYSEEARLKEFRKLGVE 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M +++DL N D + SE + + I +++ + GY YE Sbjct: 239 YEMAKLKNDLAEFNTHFDNWFSETSLY--EKGEILEVLAKMKELGYTYEA---------- 286 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 R+T DD DR L+K+DG+YTYF D+AY K +RG D +I + G+D Sbjct: 287 ------DGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A ++ + + ++VRL +G +KMSKR G+ ITLR ++DEVG Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGV 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R DFD KEQS++NPV+Y QYA+AR SI +QAK+ ++ Sbjct: 401 DAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEV---- 456 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + ++L+ +A++ IE+A + +++ Y+ DLAS FH ++ Sbjct: 457 --AAANDFTTITNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLASHFHKFYNAE 514 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ + T + ++ AV + + L ++GV +P M Sbjct: 515 K-------VLTDDTEKTKAHVAMIEAVRITLKNALAMVGVSAPESM 553 >gi|58584465|ref|YP_198038.1| arginyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|75498018|sp|Q5GT78|SYR_WOLTR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|58418781|gb|AAW70796.1| Arginyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 565 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 254/585 (43%), Positives = 366/585 (62%), Gaps = 21/585 (3%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +F SS + + L ++ + + ++E P + AHG + TN AM+L++ Sbjct: 1 MNIFKRISSLILSKLDKLKQGV----SSVTNFIVEPPSNRAHGDIYTNIAMVLAKHEKKK 56 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P+ IAE++ + ++ V IAG GFIN++L IL I E+G IG Sbjct: 57 PVEIAEVLAKEFALFDEIARVEIAGPGFINMHLKIEVWHGILEQINELKTEFGTLNIGNN 116 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +N+EFVSANPTGP+H+GH R AV GD L +L+ GY VT+EYYINDAGAQI+TL S Sbjct: 117 QAINVEFVSANPTGPLHIGHARGAVFGDVLTNLLKKVGYRVTKEYYINDAGAQIDTLVRS 176 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V+ RY++AL + +G YPG YLK +G+ELA KY ELL E++ ++++Y++ + Sbjct: 177 VYLRYKEAL-GEKISIEKGLYPGEYLKPIGEELAKKYGRELL---EKQDNRVIREYTLSS 232 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 ++++I++ + L + HD+F SE + + I I L+ +G VYEG L PKSK ++ Sbjct: 233 ILELIKEGMNLLGVSHDVFTSEYELQK--SGKIEKSIKLLSDKGLVYEGYLEKPKSKESE 290 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 RK++LFRST GDDVDR L K DGS+TYFA+D+AY K RGF+NMI +GSDH Sbjct: 291 NWT-SRKEMLFRSTEFGDDVDRALKKEDGSWTYFASDIAYHFDKISRGFNNMIVALGSDH 349 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY+KRL+AV +A+S+ +A+I V L +V + +G P+KMSKR+G+F+T+R VV+EVG D Sbjct: 350 GGYIKRLKAVISALSDNQAKIEVKLHNVVNFFENGKPVKMSKRSGNFLTVRDVVEEVGRD 409 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 RF+ML RKN +LDFDF KVKEQSK+NP+FYVQYA+ R S+ R A P + L Sbjct: 410 ITRFIMLTRKNDMVLDFDFTKVKEQSKDNPIFYVQYAHVRAHSLMRNAPKELPKANPSLL 469 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 N EL LI LA++P V+E A EP+++ FYL ++A FH W +G+ Sbjct: 470 KTNG----------ELFLIKTLAKWPDVVETAARLCEPHRITFYLLEVAEAFHILWGYGK 519 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +RF+ +N LT R+ LV A+ +I SGL++ +E EM Sbjct: 520 SDLNMRFILEDNPNLTAARMFLVQALVHVIASGLSMFNIEPLEEM 564 >gi|49482837|ref|YP_040061.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252] gi|257424726|ref|ZP_05601153.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053] gi|257427395|ref|ZP_05603794.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322] gi|257430027|ref|ZP_05606411.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397] gi|257432729|ref|ZP_05609089.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410] gi|257435633|ref|ZP_05611681.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876] gi|282903199|ref|ZP_06311090.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus C160] gi|282904986|ref|ZP_06312844.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260] gi|282907943|ref|ZP_06315777.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910251|ref|ZP_06318055.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WBG10049] gi|282913444|ref|ZP_06321233.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus M899] gi|282918397|ref|ZP_06326134.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427] gi|282923362|ref|ZP_06331042.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101] gi|283957408|ref|ZP_06374861.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus A017934/97] gi|293500491|ref|ZP_06666342.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424] gi|293509436|ref|ZP_06668147.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809] gi|293524023|ref|ZP_06670710.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015] gi|295427150|ref|ZP_06819786.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297590501|ref|ZP_06949140.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8] gi|56749422|sp|Q6GJ61|SYR_STAAR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|49240966|emb|CAG39634.1| putative arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252] gi|257272296|gb|EEV04419.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053] gi|257275588|gb|EEV07061.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322] gi|257279224|gb|EEV09825.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397] gi|257282144|gb|EEV12279.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410] gi|257284824|gb|EEV14943.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876] gi|282314230|gb|EFB44620.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101] gi|282317531|gb|EFB47903.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427] gi|282322476|gb|EFB52798.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus M899] gi|282325643|gb|EFB55951.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WBG10049] gi|282328188|gb|EFB58467.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331811|gb|EFB61322.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260] gi|282596154|gb|EFC01115.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus C160] gi|283790859|gb|EFC29674.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus A017934/97] gi|290920986|gb|EFD98047.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015] gi|291095496|gb|EFE25757.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424] gi|291467533|gb|EFF10048.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809] gi|295128938|gb|EFG58568.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297576800|gb|EFH95515.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8] gi|312438970|gb|ADQ78041.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60] gi|315193977|gb|EFU24371.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00] gi|323439428|gb|EGA97150.1| arginyl-tRNA synthetase [Staphylococcus aureus O11] gi|323442112|gb|EGA99746.1| arginyl-tRNA synthetase [Staphylococcus aureus O46] Length = 553 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 197/586 (33%), Positives = 310/586 (52%), Gaps = 34/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L + K + +I D I IE P+D +G +TN AM+L++ + Sbjct: 1 MNIIDQVKQTLVEEIAASINKAGLADEIPD-IKIEVPKDTKNGDYATNIAMVLTKIAKRN 59 Query: 61 PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ IV + + + IAG GFIN YL YL I+ + G ++G K Sbjct: 60 PREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G V +E+VSANPTG +H+GH R A VGD LA+++ +GY VTREYYINDAG QI LA Sbjct: 120 GQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ R+ +AL +N +PE Y G + +GK+LA+K+ E+ ++ EE L + V+ Sbjct: 180 SIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKH-PEIKDYSEEARLKEFRKLGVE 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M +++DL N D + SE + + I +++ + GY YE Sbjct: 239 YEMAKLKNDLAEFNTHFDNWFSETSLY--EKGEILEVLAKMKELGYTYEA---------- 286 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 R+T DD DR L+K+DG+YTYF D+AY K +RG D +I + G+D Sbjct: 287 ------DGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A ++ + + ++VRL +G +KMSKR G+ ITLR ++DEVG Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGV 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R DFD KEQS++NPV+Y QYA+AR SI +QAK+ ++ Sbjct: 401 DAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEV---- 456 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + ++L+ +A++ IE+A + +++ Y+ DLAS FH ++ Sbjct: 457 --AAANDFTTITNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLASHFHKFYNAE 514 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ + T + ++ AV + + L ++GV +P M Sbjct: 515 K-------VLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM 553 >gi|332671324|ref|YP_004454332.1| arginyl-tRNA synthetase [Cellulomonas fimi ATCC 484] gi|332340362|gb|AEE46945.1| arginyl-tRNA synthetase [Cellulomonas fimi ATCC 484] Length = 560 Score = 559 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 202/589 (34%), Positives = 298/589 (50%), Gaps = 40/589 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 A S L+ L I + +ERPR HG +TN AM L++ G +P Sbjct: 4 AQLSEALRAALVHAVDDGTFALDPAAIPATVHLERPRQREHGDWATNVAMQLAKKAGTNP 63 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 AE + R+K V SV +AG GF+N+ L + ++ SIV G EYGRN G Sbjct: 64 RAFAEELARRLKETSGVASVEVAGPGFLNIRLDAAAAGELARSIVEQGGEYGRNDTLAGV 123 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 ++N+EFVSANPTGP+H+G R A VGD+LA ++ SG +V REYY ND GAQI+ A S+ Sbjct: 124 RLNLEFVSANPTGPLHIGGVRWAAVGDSLARVLQASGADVAREYYFNDHGAQIDRFARSL 183 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY----SSELLNFPEEKWLPIVKDYS 237 R D PE Y G Y+ + +++ + P ++ + Sbjct: 184 VARAL------SEDAPEDGYGGSYITEIAEQVVADALAAGEPDPRTLPRDEATEAFRARG 237 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 V+ M I+ L + D++ ED H + + ++ L G+V+E Sbjct: 238 VELMFAEIKQSLHDFGVDFDVYFHEDSLH--ESGAVEHAVERLRAGGHVFE--------- 286 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 + R+T GDD DR ++KSDG Y + D+AY+ K ERGFD +I ++G Sbjct: 287 -------QDGAVWLRTTDFGDDKDRVVIKSDGEGAYISGDIAYYLDKRERGFDRVILMLG 339 Query: 358 SDHSGYVKRLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 +DH GYV R+ AV AA + + +L+ ++V L +DG P++MSKRAG +T+ +VD Sbjct: 340 ADHHGYVGRMMAVCAAFGDTPHVNLEILIGQMVNLVKDGEPVRMSKRAGTVLTIDDLVDA 399 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG D+ R+ + +D D + ENPVFYVQYA+AR SI R A D + Sbjct: 400 VGVDAARYSLARSSADSTIDLDLDLLASAKNENPVFYVQYAHARTASIGRNAVDAGVRKE 459 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 D F +++ E SE L+ LAE+PR++ A +EP+++A YL DLA FH + Sbjct: 460 -DGFDASLLDHE-----SEAVLLGQLAEFPRIVAQAAELREPHRVARYLEDLAGTFHKWY 513 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R + F RL LV A ++ +GL ++GV +P M Sbjct: 514 DAKRR--VVPFGDEPVDDGHRTRLWLVDATRQVLANGLGLLGVSAPERM 560 >gi|304437110|ref|ZP_07397073.1| arginine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370061|gb|EFM23723.1| arginine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 552 Score = 559 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 205/586 (34%), Positives = 300/586 (51%), Gaps = 35/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKK-ILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + L ++ ++ + L I++E P D A G +TN AM +R Sbjct: 1 MEIKQQIEQALLRAVEAATAAGELPEGGALPPILLEEPPDKALGDFATNFAMQSARVFRQ 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE + A + +D +AG GF+N YL + L I+ +G YG Sbjct: 61 PPKKIAETLRAHL-TGAWLDHAEMAGPGFLNFYLKKDVMADTLRGILRAGETYGTLAPKD 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 + +E+VSANPTGP+HVGH R A VG L +L+ +GY V EYY+NDAG Q++ LA+ Sbjct: 120 AAPIQVEYVSANPTGPLHVGHGRGAAVGSALVTLLRTAGYTVESEYYVNDAGNQMHLLAV 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY + L + PE Y G + + + D+ L EE+ L KD + + Sbjct: 180 SVNARYLELL-GREVLFPENGYHGADIVETAQRIIDRDGERYLALSEEERLEQFKDIAYR 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 + +R+DL + D + SE H P+ +R ++D L +G YE Sbjct: 239 EKLAALREDLADFGVTFDAWFSERTLH---PAAVRRVVDVLLERGTAYE----------- 284 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + RST GDD DR + + +G TY AAD+AY KY RGF ++ + G+D Sbjct: 285 -----KDGAVWLRSTDYGDDKDRVIFRDNGVPTYLAADIAYHDNKYARGFGRLVNIWGAD 339 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYV R++A AA+ Q+ VLL ++V LYRDG +K+SKR G+ +TLR +++EVG Sbjct: 340 HHGYVARVKAAMAALGHDPQQLTVLLLQMVSLYRDGEVVKLSKRTGETVTLRELMEEVGV 399 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ L R LDFD K+++ ENPV+Y+QYA+AR SIFRQA++ + Sbjct: 400 DAARYFFLMRSLDSQLDFDLDLAKKRTNENPVYYIQYAHARISSIFRQAEES------KI 453 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 P + E D +E LI LA YP IE A P ++A Y ++LA+ FH ++ Sbjct: 454 VPLDGAELERLTDETETALIKKLAAYPEEIERAAAEYAPQRIARYSHELAAAFHAFYNKC 513 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R + L RL LV A +I L I+GV +P +M Sbjct: 514 R-------IVGQEPALASARLALVMATGRVIRHSLGILGVSAPEKM 552 >gi|51473278|ref|YP_067035.1| arginyl-tRNA synthetase [Rickettsia typhi str. Wilmington] gi|81390280|sp|Q68XT9|SYR_RICTY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|51459590|gb|AAU03553.1| Arginine translase [Rickettsia typhi str. Wilmington] Length = 576 Score = 559 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 239/585 (40%), Positives = 359/585 (61%), Gaps = 9/585 (1%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +F ++LK + ++ ++I + IE P+D +G LS+N AMI++ + Sbjct: 1 MNIF----NQLKQDIIAASQQLYNNQEIANTATIETPKDSFNGDLSSNIAMIIASKESIA 56 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A + P + S+ IAG GFIN + + + I+ ++ I K Sbjct: 57 PREVALKFKEVLVTLPYIASIEIAGPGFINFTIKAESWQAAIKDILQHEEKFFEIDIDKN 116 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 + +NIE+VSANPTGPMH+GH R AV GD LA ++ GY VT+EYY+NDAG+QIN L + Sbjct: 117 SNINIEYVSANPTGPMHIGHARGAVYGDVLARILQKVGYSVTKEYYVNDAGSQINDLVST 176 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V RY++AL +P G YPG YL +G+ L+ +Y ++LL + + I+K +V+ Sbjct: 177 VLLRYKEAL-GEQITIPIGLYPGEYLIPLGEILSKEYGNKLLTMNDVERFKIIKSLAVEK 235 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 M+ + R DL L I+HDIF SE + D I + L G +YEG LP PK K + Sbjct: 236 MLDLNRKDLADLGIKHDIFFSEQSLY--DKGEIEKTVKLLESMGLIYEGTLPAPKGKVHE 293 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + Q LF+ST GD DRP+ K+DGS++YFA+DLAY K K +RG +++IYV+G+DH Sbjct: 294 DWKH-KVQKLFKSTNYGDSQDRPIEKADGSWSYFASDLAYAKDKIDRGANHLIYVLGADH 352 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 SGYVKR+EA+ A+ ++K +++V +C+LV +G+P+KMSKR G F +++ V +VG D Sbjct: 353 SGYVKRIEAIVKALGQEKVKVDVKICQLVNFVENGVPVKMSKRLGSFASVQDVNKKVGKD 412 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +RFMML R+N + LDFD KVKEQS+ENP+FYVQYA+ R +SI +A+++ P+ ++ F Sbjct: 413 IIRFMMLTRQNDKPLDFDLVKVKEQSRENPIFYVQYAHVRTKSILSKARELMPEA-YNSF 471 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 E+++I LA + + +E + EP+++AFYL +LAS FH W+ G+ Sbjct: 472 KEGKYNLSLLSTEEEIEIIKLLAAWTKTLEASVKYFEPHRIAFYLINLASKFHSMWNFGK 531 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 EN RF+ NN++LT+ RL L + +I SGL +IGVE M Sbjct: 532 ENSDYRFIIENNQELTLARLALASVIQKVIASGLEVIGVEPMVTM 576 >gi|15926285|ref|NP_373818.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315] gi|148267067|ref|YP_001246010.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9] gi|150393115|ref|YP_001315790.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1] gi|257793189|ref|ZP_05642168.1| arginyl-tRNA synthetase [Staphylococcus aureus A9781] gi|258407674|ref|ZP_05680809.1| arginyl-tRNA synthetase [Staphylococcus aureus A9763] gi|258420362|ref|ZP_05683307.1| arginyl-tRNA synthetase [Staphylococcus aureus A9719] gi|258436509|ref|ZP_05689167.1| arginyl-tRNA synthetase [Staphylococcus aureus A9299] gi|258442357|ref|ZP_05691120.1| arginyl-tRNA synthetase [Staphylococcus aureus A8115] gi|258446271|ref|ZP_05694429.1| arginyl-tRNA synthetase [Staphylococcus aureus A6300] gi|258450070|ref|ZP_05698167.1| arginyl-tRNA synthetase [Staphylococcus aureus A6224] gi|258455109|ref|ZP_05703071.1| arginyl-tRNA synthetase [Staphylococcus aureus A5937] gi|269202229|ref|YP_003281498.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98] gi|282895046|ref|ZP_06303268.1| arginyl-tRNA synthetase [Staphylococcus aureus A8117] gi|295406988|ref|ZP_06816791.1| arginyl-tRNA synthetase [Staphylococcus aureus A8819] gi|296276963|ref|ZP_06859470.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1] gi|297246149|ref|ZP_06930004.1| arginyl-tRNA synthetase [Staphylococcus aureus A8796] gi|21542256|sp|Q99W05|SYR_STAAN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|189083551|sp|A6TZ85|SYR_STAA2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|189083552|sp|A5IQG1|SYR_STAA9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|13700499|dbj|BAB41796.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315] gi|147740136|gb|ABQ48434.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9] gi|149945567|gb|ABR51503.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1] gi|257787161|gb|EEV25501.1| arginyl-tRNA synthetase [Staphylococcus aureus A9781] gi|257840754|gb|EEV65212.1| arginyl-tRNA synthetase [Staphylococcus aureus A9763] gi|257843676|gb|EEV68080.1| arginyl-tRNA synthetase [Staphylococcus aureus A9719] gi|257848780|gb|EEV72766.1| arginyl-tRNA synthetase [Staphylococcus aureus A9299] gi|257852086|gb|EEV76018.1| arginyl-tRNA synthetase [Staphylococcus aureus A8115] gi|257854865|gb|EEV77810.1| arginyl-tRNA synthetase [Staphylococcus aureus A6300] gi|257856689|gb|EEV79593.1| arginyl-tRNA synthetase [Staphylococcus aureus A6224] gi|257862749|gb|EEV85515.1| arginyl-tRNA synthetase [Staphylococcus aureus A5937] gi|262074519|gb|ACY10492.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98] gi|282762629|gb|EFC02767.1| arginyl-tRNA synthetase [Staphylococcus aureus A8117] gi|285816308|gb|ADC36795.1| Arginyl-tRNA synthetase [Staphylococcus aureus 04-02981] gi|294968219|gb|EFG44245.1| arginyl-tRNA synthetase [Staphylococcus aureus A8819] gi|297176995|gb|EFH36251.1| arginyl-tRNA synthetase [Staphylococcus aureus A8796] gi|315128881|gb|EFT84879.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03] gi|329724382|gb|EGG60893.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172] Length = 553 Score = 559 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 196/586 (33%), Positives = 310/586 (52%), Gaps = 34/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L + K + +I D I IE P+D +G +TN AM+L++ + Sbjct: 1 MNIIDQVKQTLVEEIAASINKAGLADEIPD-IKIEVPKDTKNGDYATNIAMVLTKIAKRN 59 Query: 61 PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ IV + + + IAG GFIN YL YL I+ + G ++G K Sbjct: 60 PREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G V +E+VSANPTG +H+GH R A VGD LA+++ +GY VTREYYINDAG QI LA Sbjct: 120 GQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ R+ +AL +N +PE Y G + +GK+LA+K+ E+ ++ EE L + V+ Sbjct: 180 SIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKH-PEIKDYSEEARLKEFRKLGVE 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M +++DL N D + SE + + I +++ + GY YE Sbjct: 239 YEMAKLKNDLAEFNTHFDNWFSETSLY--EKGEILEVLAKMKELGYTYEA---------- 286 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 R+T DD DR L+K+DG+YTYF D+AY K +RG D +I + G+D Sbjct: 287 ------DGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A ++ + + ++VRL +G +KMSKR G+ ITLR ++DEVG Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGV 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R DFD KEQS++NPV+Y QYA+AR SI +QAK+ ++ Sbjct: 401 DAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEVTAAN 460 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + ++L+ +A++ IE+A + +++ Y+ DLA+ FH ++ Sbjct: 461 DFTTI------TNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLAAHFHKFYNAE 514 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ + T + ++ AV + + L ++GV +P M Sbjct: 515 K-------VLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM 553 >gi|312829102|emb|CBX33944.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R 2] Length = 553 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 196/586 (33%), Positives = 310/586 (52%), Gaps = 34/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L + K + +I D I IE P+D +G +TN AM+L++ + Sbjct: 1 MNIIDQVKQTLVEEIAASINKAGLADEIPD-IKIEVPKDTKNGDYATNIAMVLTKIAKRN 59 Query: 61 PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ IV + + + IAG GFIN YL YL I+ + G ++G K Sbjct: 60 PREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G V +E+VSANPTG +H+GH R A VGD LA+++ +GY VTREYYINDAG QI LA Sbjct: 120 GQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ R+ +AL +N +PE Y G + +GK+LA+K+ E+ ++ EE L + V+ Sbjct: 180 SIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKH-PEIKDYSEEARLKEFRKLGVE 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M +++DL N D + SE + + I +++ + GY YE Sbjct: 239 YEMAKLKNDLAEFNTHFDNWFSETSLY--EKGGILEVLAKMKELGYTYEA---------- 286 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 R+T DD DR L+K+DG+YTYF D+AY K +RG D +I + G+D Sbjct: 287 ------DGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A ++ + + ++VRL +G +KMSKR G+ ITLR ++DEVG Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGV 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R DFD KEQS++NPV+Y QYA+AR SI +QAK+ ++ Sbjct: 401 DAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEVTAAN 460 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + ++L+ +A++ IE+A + +++ Y+ DLA+ FH ++ Sbjct: 461 DFTTI------TNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLAAHFHKFYNAE 514 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ + T + ++ AV + + L ++GV +P M Sbjct: 515 K-------VLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM 553 >gi|319935203|ref|ZP_08009642.1| arginyl-tRNA synthetase [Coprobacillus sp. 29_1] gi|319809853|gb|EFW06241.1| arginyl-tRNA synthetase [Coprobacillus sp. 29_1] Length = 553 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 207/581 (35%), Positives = 324/581 (55%), Gaps = 35/581 (6%) Query: 7 FSSRLKNYLKEIDCKIK-VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 LK LK+ + VE LD+IVIE P+D HG S+N AM L++ L +P IA Sbjct: 6 IELSLKKVLKQAIIDLDFVEDYNLDQIVIEIPKDKTHGDYSSNIAMQLTKILKRNPREIA 65 Query: 66 ELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 + I+ + D ++D V IAG GFINL+L + I+ ++V YG++ GKG K N Sbjct: 66 QGIIETMNKDAGNIDHVEIAGPGFINLFLRKDAMTSIIKEVLVEQDHYGQSDFGKGIKYN 125 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 IEFVSANPTG +H+GH + A VGD++ +M +GY+VT+EYYINDAG QI LALS++ R Sbjct: 126 IEFVSANPTGDLHLGHAKGAAVGDSICRIMNAAGYDVTKEYYINDAGNQITNLALSLYAR 185 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 Y QAL + LPE Y G + + + + ++Y + + E++ + + + ++ Sbjct: 186 YLQAL-GQERQLPEDGYYGKDIIQIAESIKNEYGDKFAHVDEKEAIAYFRSIGTEHELQK 244 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 I+D LK + HD++ SE + + I I L QGY YE Sbjct: 245 IKDILKEFRVVHDVWFSETSLYAEN--KIEPTIQRLKDQGYTYEA--------------- 287 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 L F+ST DD DR L+KSDGSYTY D+AY K +RG++ ++ ++G+DH GY+ Sbjct: 288 -EGALWFKSTEFDDDKDRVLIKSDGSYTYLTPDIAYHLNKLDRGYEYLVDLLGADHHGYI 346 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 R++A A+ Q+N+ + ++VR+ +G +KMSKR G+ +T++ ++D++G D+ R+ Sbjct: 347 NRMKAAIQALGYNADQLNIDIMQMVRMVENGEVVKMSKRTGNAVTIKDLIDDIGVDASRY 406 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 + + S DFD K +S +NPV+Y QYA+AR SI RQA+ + ++ Sbjct: 407 FFVSKAASSPFDFDLGLAKSKSNDNPVYYAQYAHARMCSIERQAQTVGIEV--------A 458 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 E E++L+ H+ E+ I + + P+K+A Y+ LA +FH ++ Sbjct: 459 DHYELLTHPKEIELVKHINEFRNEIVESAKQRAPHKIANYIQRLAQLFHSFYNDCY---- 514 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + NR+L+ RL LV A + + LN+IGV +P +M Sbjct: 515 --VIDEANRELSSQRLSLVRATQITLKNALNLIGVSAPEKM 553 >gi|325982011|ref|YP_004294413.1| arginyl-tRNA synthetase [Nitrosomonas sp. AL212] gi|325531530|gb|ADZ26251.1| arginyl-tRNA synthetase [Nitrosomonas sp. AL212] Length = 586 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 195/614 (31%), Positives = 321/614 (52%), Gaps = 65/614 (10%) Query: 4 FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 F +F + +K+ I + + + R + +HG S N AM L++PL +P Sbjct: 6 FPNFKTHFIKLIKKASSAITSLETAAISVELTRTKQASHGDYSCNLAMQLAKPLHKNPRE 65 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 IA+L++ + P ++ V +AG GFINLYL S ++ L I+ S +G + G+G K+ Sbjct: 66 IAQLLINALPPSPYLEKVEVAGAGFINLYLKNSAKQQFLHLILRSKNTFGNSTFGQGRKI 125 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EFVSANPTGP+HVGH R A +G +L++++A +G++V+RE+Y+NDAG Q++ L LS + Sbjct: 126 QVEFVSANPTGPLHVGHGRGAAIGASLSNILAAAGFDVSREFYVNDAGRQMDILTLSTWL 185 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE---EKWLPIVKDYSVQ- 239 RY + L + P Y G Y++ + + + ++ ++ PE + V+ +V Sbjct: 186 RYLE-LNHIHVPFPHNAYQGEYVRTMAQLIFQAHAQRYVHQPELLLDSLPEAVRATAVNT 244 Query: 240 ----------------------------AMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 + R+DL ++ D + SE + D Sbjct: 245 DEQLDKLIANTKKILGEDYTYIHNLVLTEQLGDCRNDLMEFGVEFDTWFSEQSLY--DNG 302 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + ID LA++ ++Y+ + FRST GD+ DR + + +G + Sbjct: 303 LVAHTIDLLAKKHHLYQ----------------QDGAIWFRSTDFGDEKDRVVQRENGQF 346 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 TYFA+D+AY K+ERGFD +I + G+DH GY+ R++ A+ ++ + L + L Sbjct: 347 TYFASDIAYHLNKFERGFDQVINIWGADHHGYIPRVKGALQALELDAERLQIALVQFAVL 406 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 YRDG MS R+G+F+TLR + EVG D+ RF + RK+ + LDFD K QS ENPV Sbjct: 407 YRDGKKAPMSTRSGEFVTLRELRQEVGKDAARFFYVMRKSDQHLDFDMDLAKSQSNENPV 466 Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511 +YVQYA+AR S+ Q + DL + ++ +EL L+ L ++P IE Sbjct: 467 YYVQYAHARVCSVLTQWEGNIDDLQE-------VNVDALSSPAELALLQKLIDFPDTIEI 519 Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571 A P+ +AFYL +LAS FH +++ R L RL L+ ++ +++ Sbjct: 520 AAKESSPHLIAFYLRELASEFHSYYNSTRF-------LVPEIPLQHARLALIASIRQVLH 572 Query: 572 SGLNIIGVESPNEM 585 +GL ++GV +P++M Sbjct: 573 NGLTLLGVSAPDKM 586 >gi|256827094|ref|YP_003151053.1| arginyl-tRNA synthetase [Cryptobacterium curtum DSM 15641] gi|256583237|gb|ACU94371.1| arginyl-tRNA synthetase [Cryptobacterium curtum DSM 15641] Length = 575 Score = 558 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 191/600 (31%), Positives = 307/600 (51%), Gaps = 40/600 (6%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + + ++ + +ERPRD A+G ++ A+ ++ + Sbjct: 1 MQIREQLEQLVNGAIRSAIEDESLALTEAPEAALERPRDLANGDWASTVALRSAKLAHTN 60 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P IA+ IV I + +DSV IAG GFIN+ L+P+ + +++ + G+++G++ I +G Sbjct: 61 PRQIAQAIVDHIPANNLIDSVDIAGAGFINIKLAPTAFQSVVAQVRQDGVDFGKSTIEEG 120 Query: 121 TKVN-IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 IE+VSANPTGP HVGH R A +GD A +M +GY V E YIND G+Q++ Sbjct: 121 YTNVNIEYVSANPTGPFHVGHGRWAALGDATARVMRHAGYTVYEENYINDHGSQMDNFGE 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RYQQ L D ++PE Y G Y+K + + + D + L+ ++ ++ + Q Sbjct: 181 SVAVRYQQLL-GRDVEMPESCYAGGYVKDIAQSIIDTDGDKWLDADPDERRVNFRERAYQ 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKS 296 + A D + SE + D + ID + +GY+YE Sbjct: 240 FELAEQHRICDAFGTTFDKWFSERSLYVKDADGKSQVDRAIDAMREKGYIYES------- 292 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + F+ST GDD DR ++KS+G TYF +D+AY K +RGF+++I + Sbjct: 293 ---------DGAVWFKSTEFGDDKDRVVMKSNGETTYFTSDVAYHYDKMQRGFEHLIDLW 343 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G+DH GYV R EA+ AA + V+L +LV L+RDG P++MSKR G+ +T V+DE Sbjct: 344 GADHHGYVARCEAMLAAWGY-PGALEVMLGQLVNLFRDGKPVRMSKRTGEMVTFEEVIDE 402 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ-------AK 469 VG DS R+MML R + + +DFD K++ NPV+YVQYA+AR SI R+ AK Sbjct: 403 VGVDSTRWMMLSRSSDQTIDFDIEVAKKRDASNPVYYVQYAHARICSILRKAAPADLAAK 462 Query: 470 DIFPDLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 ++ + +IP ++ SE+ L+ + ++ +A + ++L Y Sbjct: 463 AESGEISMNELAHAIIPAHADLTGLTHPSEIDLMRKMDGLQDLVASAARDRAAFRLTHYS 522 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 DLA +FH + + V + L RL L+ A ++ L ++G+ +P +M Sbjct: 523 QDLAGLFHAFYGNCH-------VITEDESLQNARLALIDATRIVLEISLGLLGISAPTKM 575 >gi|323342451|ref|ZP_08082683.1| arginine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463563|gb|EFY08757.1| arginine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 546 Score = 558 bits (1438), Expect = e-156, Method: Composition-based stats. Identities = 196/585 (33%), Positives = 336/585 (57%), Gaps = 39/585 (6%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M ++L ++++I +K +++E P + G STN AM L++ +G + Sbjct: 1 MN---KIETKLVGHIEDIILDAFGIEKEDGLVMLEIPNNPEMGDYSTNIAMRLTKRVGKN 57 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P IA +IV +++ + V+S+ +AG GFIN + P+ L +++ ++ +G +YGR+ G+G Sbjct: 58 PREIAGVIVEKLEDNEMVESISVAGPGFINFVMKPAVLGSVVNDVIEAGKDYGRSNAGEG 117 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 ++ E+VSANPTG +HVGH R A GD+L+ +M+F+GY+V REYYIND G QI L+ S Sbjct: 118 IRLLNEYVSANPTGQLHVGHARGAAWGDSLSRIMSFAGYDVLREYYINDLGNQILMLSHS 177 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 ++ RY+QA + ++ LPE Y G + + ++ + + L+ PEE+W+P K+ ++ Sbjct: 178 LYARYKQA-FGMEAPLPEDGYHGPDIIEIANDVKETEGDKWLSAPEEEWVPYFKELGIKL 236 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 ++ I++DL ++ D ++SE + D + + ++ L +G +E Sbjct: 237 ELERIKEDLNTFGVEMDSWVSEKWLY--DDGRVEESLEALKAKGVTFE------------ 282 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + L RST GDD DR L+KSDGSYTY D+A K ERG+ +++ + G DH Sbjct: 283 ----EDGALWLRSTDFGDDKDRVLIKSDGSYTYLVPDIANHIYKLERGYTHLLNLWGGDH 338 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY+ R++A A+ ++V + ++VRL +G+ +KMSKR G+ + L +VD++G D Sbjct: 339 HGYIVRMQAALEALGHPNV-LDVDIIQMVRLVDEGVEVKMSKRTGNALGLVELVDDIGVD 397 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 + R+ + R + LDFD +++S +NPVFYVQYA+AR SI RQA ++ Sbjct: 398 ATRYFFVSRALATPLDFDLGLARKKSNDNPVFYVQYAHARICSILRQAGEV--------- 448 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 +V + + E+ L+ + E+ V+ +A +E +K+A Y+ DLAS FH + Sbjct: 449 -PHVDVIDQLTNPKEIALLKEINEFSSVVADAAKKREVHKIANYVQDLASSFHSFY---- 503 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + +N +L RL L+ AV +++ LN+IGV +P +M Sbjct: 504 --GEVKVMDPSNPELQAQRLNLLVAVKITLSNALNLIGVNAPEQM 546 >gi|49485481|ref|YP_042702.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476] gi|56749393|sp|Q6GBM1|SYR_STAAS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|49243924|emb|CAG42350.1| putative arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476] Length = 553 Score = 558 bits (1438), Expect = e-156, Method: Composition-based stats. Identities = 197/586 (33%), Positives = 310/586 (52%), Gaps = 34/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L + K + +I D I IE P+D +G +TN AM+L++ + Sbjct: 1 MNIIDQVKQTLVEEIAASINKAGLADEIPD-IKIEVPKDTKNGDYATNIAMVLTKIAKRN 59 Query: 61 PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ IV + + + IAG GFIN YL YL I+ + G ++G K Sbjct: 60 PREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G V +E+VSANPTG +H+GH R A VGD LA+++ +GY VTREYYINDAG QI LA Sbjct: 120 GQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ R+ +AL +N +PE Y G + +GK+LA+K+ E+ ++ EE L + V+ Sbjct: 180 SIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKH-PEIKDYSEEARLKEFRKLGVE 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M +++DL N D + SE + + I +++ + GY YE Sbjct: 239 YEMAKLKNDLAEFNTHFDNWFSETSLY--EKCEILEVLAKMKELGYTYEA---------- 286 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 R+T DD DR L+K+DG+YTYF D+AY K +RG D +I + G+D Sbjct: 287 ------DGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A ++ + + ++VRL +G +KMSKR G+ ITLR ++DEVG Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGV 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R DFD KEQS++NPV+Y QYA+AR SI +QAK+ ++ Sbjct: 401 DAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEVTAAN 460 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + ++L+ +A++ IE+A + +++ Y+ DLAS FH ++ Sbjct: 461 DFTTI------TNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLASHFHKFYNAE 514 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ + T + ++ AV + + L ++GV +P M Sbjct: 515 K-------VLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM 553 >gi|91777021|ref|YP_546777.1| arginyl-tRNA synthetase [Methylobacillus flagellatus KT] gi|91711008|gb|ABE50936.1| arginyl-tRNA synthetase [Methylobacillus flagellatus KT] Length = 556 Score = 558 bits (1438), Expect = e-156, Method: Composition-based stats. Identities = 192/586 (32%), Positives = 296/586 (50%), Gaps = 41/586 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + L L+ + I I +ERP++ HG STN AM L++PL +P IAE Sbjct: 5 LKAHLTELLQVAANSLDAGAAI-SAIQLERPKNTQHGDFSTNLAMTLAKPLRQNPRAIAE 63 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 ++ + V+ V IAG GFIN YLSPS + ++ I G +YG N G+ KV +E Sbjct: 64 SLIKALPASEYVEKVEIAGAGFINFYLSPSAKQAVVREIQRQGEKYGTNDSGQSRKVQVE 123 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+HVGH R A VGD LA L+A +G+ VTRE+Y NDAGAQI+ L +SV R Sbjct: 124 FVSANPTGPLHVGHGRGAAVGDCLARLLAANGWAVTREFYYNDAGAQIDNLTVSVQARC- 182 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKY-----SSELLNFPEEKWLPIVKDYSVQAM 241 + + D+ PE Y G Y+ V + + + + ++ ++V + Sbjct: 183 KGITPGDAAWPENGYRGDYIADVAAAYMARETVIADDQAVTGKGDAEDAEAIRQFAVAYL 242 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 DLKA I D+F E +R + +++L R G+ YE Sbjct: 243 RHEQDLDLKAFKINFDVFSLESALYR--EGKVESTVESLIRSGHTYE------------- 287 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 + L R+T GDD DR + K +G YTYF D+AY K++RGF+ +I G+DH Sbjct: 288 ---QDEALWLRTTDFGDDKDRVMRKREGGYTYFVPDVAYHLDKWQRGFERVINEQGADHH 344 Query: 362 GYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 + R+ A A+ + +L ++V + R G +K+SKRAG ++TLR +++EVG Sbjct: 345 STITRVRAGLQALNVGIPQGWPEYVLHQMVTVLRGGEEVKISKRAGSYVTLRDLIEEVGC 404 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R+ L FD + QS +NPV+Y+QYA+AR S+ + D+ Sbjct: 405 DATRYFLAARRADSQLVFDIDLARAQSNDNPVYYIQYAHARICSVLSEWG-------GDV 457 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 E L+ L E+P ++ NA P+ +A YL DLA H +++ Sbjct: 458 ASLAQADLSLLETEHEAILMQRLGEFPELVANAAQELAPHMVATYLKDLAGDLHSYYNAH 517 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +T R+ L+ ++ +GL ++GV +P +M Sbjct: 518 KF-------LVEDADVTTARMALISVTRQVLRNGLELLGVSAPEKM 556 >gi|300858249|ref|YP_003783232.1| arginyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41] gi|300685703|gb|ADK28625.1| Arginyl-tRNA synthetase [Corynebacterium pseudotuberculosis FRC41] gi|302205970|gb|ADL10312.1| arginyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231] gi|302330523|gb|ADL20717.1| arginyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002] gi|308276205|gb|ADO26104.1| arginyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19] Length = 550 Score = 558 bits (1438), Expect = e-156, Method: Composition-based stats. Identities = 189/582 (32%), Positives = 297/582 (51%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD S +K I ++ +L +V+ERPR+ HG +TN A+ +++ +G++P Sbjct: 4 ADLSHLIKRTATTILESRGLDASVLPETVVVERPRNPEHGDYATNVALQVAKKVGMNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 + +L+V + +D V IAG GFIN+ L+ + +I++ I+ +G +G + + G++V Sbjct: 64 LGQLLVDALALDEAVAEAGIAGPGFINIRLAAAAQGEIVAKILAAGEAFGHSDLYAGSRV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++ SG EVTREYY ND G QI+ S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAEVTREYYFNDHGRQIDRFTNSLVA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + + + + L P E L + V+ M Sbjct: 184 AAK------GDPTPEDGYGGDYINDIAEAVVASHPDVLTQEPTEM-LETFRSVGVEMMFS 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I++ L D+F E+ + + I+ L G +Y Sbjct: 237 HIKESLHEFGTDFDVFFHENSLF--ESGAVDKAIERLKENGNLY---------------- 278 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 +S+ GDD DR ++KSDG Y A D+AY K+ERG + IY++G+DH GY Sbjct: 279 FQDGAWWLKSSDYGDDKDRVVIKSDGDAAYIAGDIAYVADKFERGHNLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL A AAA+ + + VL+ ++V L RDG ++MSKRAG ITL +V+ +G D R Sbjct: 339 ISRLRAAAAALGYEPNSVEVLIGQMVNLVRDGQAVRMSKRAGTVITLDDLVEAIGIDGAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + M+ LD D + QS +NPV+YVQY +AR SI R+A D+ F Sbjct: 399 YSMIRSSVDSSLDIDLALWQSQSSDNPVYYVQYGHARLCSIARKAGDLGITAIDPNFAL- 457 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 E LI L E+P V++ A +EP+++A Y +LA FH + + P Sbjct: 458 ------LTHDREGDLIRTLGEFPAVVKAAAELREPHRVARYAEELAGTFHRFYDSCQILP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + + RL L +A ++ + L ++GV +P M Sbjct: 512 K---AGESPQSVHTARLALANATRQVLANALGLVGVTAPERM 550 >gi|302332319|gb|ADL22512.1| putative arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JKD6159] Length = 553 Score = 557 bits (1437), Expect = e-156, Method: Composition-based stats. Identities = 196/586 (33%), Positives = 310/586 (52%), Gaps = 34/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L + K + +I D I IE P+D +G +TN AM+L++ + Sbjct: 1 MNIIDQVKQTLVEEIAASINKAGLADEIPD-IKIEVPKDTKNGDYATNIAMVLTKIAKRN 59 Query: 61 PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ IV + + + IAG GFIN YL YL I+ + G ++G K Sbjct: 60 PREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGYVNESK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G V +E+VSANPTG +H+GH R A VGD LA+++ +GY VTREYYINDAG QI LA Sbjct: 120 GQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ R+ +AL +N +PE Y G + +GK+LA+K+ E+ ++ EE L + V+ Sbjct: 180 SIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKH-PEIKDYSEEARLKEFRKLGVE 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M +++DL N D + SE + + I +++ + GY YE Sbjct: 239 YEMAKLKNDLAEFNTHFDNWFSETSLY--EKGEILEVLAKMKELGYTYEA---------- 286 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 R+T DD DR L+K+DG+YTYF D+AY K +RG D +I + G+D Sbjct: 287 ------DGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A ++ + + ++VRL +G +KMSKR G+ ITLR ++DEVG Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGV 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R DFD KEQS++NPV+Y QYA+AR SI +QAK+ ++ Sbjct: 401 DAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEVTAAN 460 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + ++L+ +A++ IE+A + +++ Y+ DLA+ FH ++ Sbjct: 461 DFTTI------TNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLAAHFHKFYNAE 514 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ + T + ++ AV + + L ++GV +P M Sbjct: 515 K-------VLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM 553 >gi|326403086|ref|YP_004283167.1| arginyl-tRNA synthetase [Acidiphilium multivorum AIU301] gi|325049947|dbj|BAJ80285.1| arginyl-tRNA synthetase [Acidiphilium multivorum AIU301] Length = 596 Score = 557 bits (1437), Expect = e-156, Method: Composition-based stats. Identities = 255/597 (42%), Positives = 364/597 (60%), Gaps = 18/597 (3%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 +F + + + ++ ++ RI + R+ AHG ++TNAA+I ++PLG P Sbjct: 4 NIFNALRRLILAEMARLFPA--LDAEVQARIEVSPTREAAHGDMATNAALIAAKPLGRPP 61 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 IA + A + PD+ AG GF+NL L+ +++I+ +G +G + +G+G Sbjct: 62 REIATALAAALSALPDIAKAEPAGPGFVNLTLTDPVWHAEIAAILRAGEAFGASAMGQGR 121 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 +VN+E+VSANPTGP+ VGHCR AVVGD LASL+A +GY+VTREYYINDAGAQ+ LA SV Sbjct: 122 RVNVEYVSANPTGPLTVGHCRGAVVGDALASLLAKAGYDVTREYYINDAGAQVTALAWSV 181 Query: 182 FWRYQQALYNN--DSDLPEG-----YYPGVYLKHVGKELADKYSSELLN-----FPEEKW 229 +WRY QAL + D YPG YL V + L + L P E W Sbjct: 182 YWRYLQALGTQLTEHDFAAATPTGLQYPGDYLIPVAEALVAAHGDALAGPGLSIAPAEAW 241 Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 L V+ +++++MM +IR+DL ALN++ D+F SE + L Q +YEG Sbjct: 242 LDTVRRHAIESMMALIREDLAALNVRQDVFTSEAALIA--AGGVERAEAILRGQDLLYEG 299 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349 +L PPK KT + + R+Q LFR+T GDDVDRP+ KSDGS TYF D+A K RGF Sbjct: 300 VLEPPKGKTPEDWE-PREQTLFRATGFGDDVDRPVRKSDGSNTYFFNDIANHADKMARGF 358 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 D MI V G+DH GYVKR++A A++ + A ++++LC++VR+ +DG P++MSKRAG +I Sbjct: 359 DTMIDVWGADHGGYVKRMQAAVKALAAGRDATLDIVLCQIVRVMKDGTPMRMSKRAGTYI 418 Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 LR ++D VG D VRF+ML RK+ ++FD Q++ENPVFYVQYA+ARCRS+ R A Sbjct: 419 ELRDLIDAVGPDVVRFIMLMRKSDAQMEFDLDAAVAQTRENPVFYVQYAHARCRSVLRAA 478 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 ++ D S EL L+ LA +PR++E+A A+EP+++ F+LYDL Sbjct: 479 AEMPELGDTVDAALAEAALASLTAPEELALVRRLAAWPRLVESAAQAREPHRIGFFLYDL 538 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A FH W+ GR + LRF+QA+ + + RL LV A A +I SGL ++GV EM Sbjct: 539 AGDFHALWNAGRADATLRFIQADAVEASRARLALVAATAVVIRSGLAVMGVAPVEEM 595 >gi|253731229|ref|ZP_04865394.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253724970|gb|EES93699.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|329729647|gb|EGG66048.1| arginine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193] Length = 553 Score = 557 bits (1437), Expect = e-156, Method: Composition-based stats. Identities = 196/586 (33%), Positives = 310/586 (52%), Gaps = 34/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L + K + +I D I IE P+D +G +TN AM+L++ + Sbjct: 1 MNIIDQVKQTLVEEIAASINKAGLADEIPD-IKIEVPKDTKNGDYATNIAMVLTKIAKRN 59 Query: 61 PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ IV + + + IAG GFIN YL YL I+ + G ++G K Sbjct: 60 PREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G V +E+VSANPTG +H+GH R A VGD LA+++ +GY VTREYYINDAG QI LA Sbjct: 120 GQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ R+ +AL +N +PE Y G + +GK+LA+K+ E+ ++ EE L + V+ Sbjct: 180 SIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKH-PEIKDYSEEARLKEFRKLGVE 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M +++DL N D + SE + + I +++ + GY YE Sbjct: 239 YEMAKLKNDLAEFNTHFDNWFSETSLY--EKGEILEVLAKMKELGYTYEA---------- 286 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 R+T DD DR L+K+DG+YTYF D+AY K +RG D +I + G+D Sbjct: 287 ------DGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A ++ + + ++VRL +G +KMSKR G+ ITLR ++DEVG Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGV 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R DFD KEQS++NPV+Y QYA+AR SI +QAK+ ++ Sbjct: 401 DAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEV---- 456 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + ++L+ +A++ IE+A + +++ Y+ DLA+ FH ++ Sbjct: 457 --AAANDFTTITNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLAAHFHKFYNAE 514 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ + T + ++ AV + + L ++GV +P M Sbjct: 515 K-------VLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM 553 >gi|167465619|ref|ZP_02330708.1| arginyl-tRNA synthetase [Paenibacillus larvae subsp. larvae BRL-230010] Length = 557 Score = 557 bits (1437), Expect = e-156, Method: Composition-based stats. Identities = 207/587 (35%), Positives = 320/587 (54%), Gaps = 32/587 (5%) Query: 1 MYLFADFSSRLKNYLK-EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + + + +K + + V+ + L + +E P+D AHG +TN AM L+R Sbjct: 1 MNVLNEVKTSVKKAIADAVVSAGIVDIEQLPAVTLEVPKDKAHGDFATNIAMQLTRIAKQ 60 Query: 60 DPLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +P IAE ++A + + D V IAG GFIN ++ SYL +++ ++ G YG+ +G Sbjct: 61 NPRQIAEKLIAHLDKEAAYIDEVEIAGPGFINFRMNKSYLYQVIGQVLEQGNSYGKINMG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG +V +EFVSANPTG +H+GH R A VGD L +++ +G EVTREYYINDAG Q+ LA Sbjct: 121 KGKRVQVEFVSANPTGSLHLGHARGAAVGDALCNVLEMAGCEVTREYYINDAGNQVLNLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 S+ RY+QAL ++++PE Y G +K +ELA LL +E+ L + Y + Sbjct: 181 KSIEARYRQAL-GQEAEMPEDGYYGEDIKGFAEELAKAEGDRLLALNDEERLVFFRKYGL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + + I+ DL ++ D + SE + + I D++ L G+V+E Sbjct: 240 EKELDKIKRDLGRFGVKFDEWFSETSIYENNM--IDDVLKQLKDNGHVFE---------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 R+T GDD DR L+K+DG+YTY D+AY + KYERG+D +I + G+ Sbjct: 288 ------QDGATWLRTTDYGDDKDRVLIKNDGTYTYLTPDVAYHRNKYERGYDEIINIWGA 341 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ R++A A+ ++ VL+ ++V L+++G +KMSKR G +T+ ++DEVG Sbjct: 342 DHHGYIPRMKAAVTALGYDANKLTVLIAQMVSLFQNGEKVKMSKRTGKAVTMEDLMDEVG 401 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D++R+ R LDFD +S ENPVFYVQYA+AR SIFRQA++ Sbjct: 402 VDAIRYFFTMRSMDSHLDFDMDLAISKSNENPVFYVQYAHARICSIFRQAEEQG----IS 457 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + P +E L+ +AE P + A P++L Y+Y+LAS FH ++ Sbjct: 458 MLPAGQADLSRLTAEAEFDLLRKMAELPEEVAIAAEQYAPHRLIRYVYELASQFHSYYKA 517 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R V ++ T RL L+ A+ ++ + L +GV P M Sbjct: 518 ER-------VITDDAAQTQARLALLAALRVVLRNVLAAVGVSVPERM 557 >gi|189424202|ref|YP_001951379.1| arginyl-tRNA synthetase [Geobacter lovleyi SZ] gi|189420461|gb|ACD94859.1| arginyl-tRNA synthetase [Geobacter lovleyi SZ] Length = 564 Score = 557 bits (1437), Expect = e-156, Method: Composition-based stats. Identities = 190/591 (32%), Positives = 296/591 (50%), Gaps = 36/591 (6%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + + L + ++ +VI P AHG + N A+ L++P P Sbjct: 2 IRQKLAVLVTQALASARNAGVLCSELFPDVVIGTPAQEAHGDFACNIALQLAKPERKSPR 61 Query: 63 TIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +AE ++ + D + IAG GFIN +++PS ++ L I +G YG G G Sbjct: 62 QVAESVLLHLQDTDGLIRRAEIAGPGFINFFIAPSAWQQCLPLIEQAGPAYGTTDSGAGR 121 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 K +EFVSANPTGP+H+GH R A +GD L L+A +G++VTRE+Y NDAGAQI+ LALSV Sbjct: 122 KAQVEFVSANPTGPLHIGHGRGAAIGDVLCRLLAATGWQVTREFYYNDAGAQISNLALSV 181 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY-----SSELLNFPEEKWLPIVKDY 236 R + +D P Y G Y+K V ++ + L ++ + Sbjct: 182 QARCL-GIETDDPRWPADGYQGEYIKEVATAYLAGETVVAGDQQVTASGDPDDLDAIRRF 240 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 +V A+ + DL+A +++ D + E + + + + G+ YE Sbjct: 241 AVAALRREQDQDLQAFDVRFDHYFLESSLY--SDGKVEAAVQQMIANGHTYE-------- 290 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 L R+T GDD DR + K+DG YTYF D+AY K++RGF ++ Sbjct: 291 --------QEGALWLRTTDFGDDKDRVMRKTDGGYTYFVPDVAYHLDKWQRGFLRVVNEQ 342 Query: 357 GSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414 G+DH + R+ A A+ K +L ++V + R G +K+SKRAG ++TLR ++ Sbjct: 343 GADHHSTITRVRAGLQALNAGIPKGWPEYVLHQMVTVMRGGEEVKISKRAGSYVTLRDLI 402 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 DEVG D+ RF + RK L FD K+QS +NPV+Y+QYA+AR SIF A D Sbjct: 403 DEVGRDATRFFFVMRKPDSQLVFDIDLAKQQSLDNPVYYIQYAHARICSIFENAADKGIH 462 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 L V+ Q EL+LI L P +++A EP+K+ +YL +LA FH Sbjct: 463 LPDQTPDAAVLAQ--LETPEELRLIKWLESLPETVDDAAQEFEPHKIVYYLTELAGQFHS 520 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++ + V + L++ RL L+ +I + L ++GV +P +M Sbjct: 521 YYNKSK-------VVTEDTSLSIARLYLLARTRQVIQNALTLLGVSAPEKM 564 >gi|82750314|ref|YP_416055.1| arginyl-tRNA synthetase [Staphylococcus aureus RF122] gi|109895039|sp|Q2YSW8|SYR_STAAB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|82655845|emb|CAI80247.1| arginyl-tRNA synthetase [Staphylococcus aureus RF122] Length = 553 Score = 557 bits (1436), Expect = e-156, Method: Composition-based stats. Identities = 197/586 (33%), Positives = 309/586 (52%), Gaps = 34/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L + K + +I D I IE P+D +G +TN AM+L++ + Sbjct: 1 MNIIDQVKQTLVEEIAASINKAGLADEIPD-IKIEVPKDTKNGDYATNIAMVLTKIAKRN 59 Query: 61 PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ IV + + + IAG GFIN YL YL I+ + G ++G K Sbjct: 60 PREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGYVNESK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G V +E+VSANPTG +H+GH R A VGD LA+++ +GY VTREYYINDAG QI LA Sbjct: 120 GQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ R+ +AL +N +PE Y G + +GK+LA+K E+ ++ EE L + V+ Sbjct: 180 SIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEK-RPEIKDYSEEARLKEFRKLGVE 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M +++DL N D + SE + + I +++ + GY YE Sbjct: 239 YEMAKLKNDLAEFNTHFDNWFSETSLY--EKGEILEVLAKMKELGYTYEA---------- 286 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 R+T DD DR L+K+DG+YTYF D+AY K +RG D +I + G+D Sbjct: 287 ------DGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A ++ + + ++VRL +G +KMSKR G+ ITLR ++DEVG Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGV 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R DFD KEQS++NPV+Y QYA+AR SI +QAK+ ++ Sbjct: 401 DAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEV---- 456 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + ++L+ +A++ IE+A + +++ Y+ DLAS FH ++ Sbjct: 457 --AAANDFTTITNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLASHFHKFYNAE 514 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ + T + ++ AV + + L ++GV +P M Sbjct: 515 K-------VLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM 553 >gi|7476032|pir||T09994 arginine-tRNA ligase (EC 6.1.1.19) - Mycobacterium leprae gi|699338|gb|AAA63099.1| argS [Mycobacterium leprae] Length = 687 Score = 557 bits (1436), Expect = e-156, Method: Composition-based stats. Identities = 187/582 (32%), Positives = 291/582 (50%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LK + + ++ L + + +ERPR+ HG S+N AM L + +G +PL Sbjct: 141 ADLAELLKTTAIVVLAERGLDAAALPQTVTVERPRNPEHGDYSSNLAMQLGKKVGANPLE 200 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + + V +AG GFIN+ L S I+++++ + +G + G ++ Sbjct: 201 LAGWLAEVLAQAGGIADVEVAGPGFINMRLDASAQAMIVNTVINADKNFGHSDDLAGYQI 260 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L++ G V REYY ND GAQ++ S+ Sbjct: 261 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGAAVVREYYFNDHGAQVDRFTNSLIA 320 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + L P Y G Y+ + ++ + + L+ PE + V++ V M Sbjct: 321 AAKGELT------PADGYAGTYVTDIAAQVMQQ-APYALSLPESEMHETVREIGVDLMFT 373 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L D++ ED H + + I L G VYE Sbjct: 374 HIKKSLHEFGTDFDVYTHEDSMHA--SGRVDEAIARLRDTGNVYE--------------- 416 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 L R++ GDD DR ++KSDG Y A DLAY+ K +RGFD IY++G+DH GY Sbjct: 417 -KDGALWLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHGY 475 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA + A + VL+ ++V L DG ++MSKR+G+ ITL +V+ +G D+ R Sbjct: 476 IARLKAAAAAFGDDPAIVEVLIGQMVNLVCDGQLVRMSKRSGNVITLDDLVEAIGVDAAR 535 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D S ENPV+YVQYA+AR ++ R A + + Sbjct: 536 YSLIRSSVDTPIDIDLALWSSSSNENPVYYVQYAHARLSALARNAAEFG-------LIPD 588 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 E E L+ + E+P+V++ A +EP+++ YL DLA +H + R P Sbjct: 589 TGHLELLSHDKEGALLRTVGEFPQVLKTAAALREPHRVCRYLEDLAGDYHRFYDSCRVLP 648 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L RL L A +I +GL I+GV +P M Sbjct: 649 QG---DEKPTDLHTARLALCQANRQVIANGLAILGVSAPERM 687 >gi|83591226|ref|YP_431235.1| arginyl-tRNA synthetase [Moorella thermoacetica ATCC 39073] gi|109895003|sp|Q2RFU7|SYR_MOOTA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|83574140|gb|ABC20692.1| arginyl-tRNA synthetase [Moorella thermoacetica ATCC 39073] Length = 560 Score = 557 bits (1436), Expect = e-156, Method: Composition-based stats. Identities = 200/565 (35%), Positives = 311/565 (55%), Gaps = 31/565 (5%) Query: 22 IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDS 80 ++ L VIE PRD HG + N A++L+R P +A IV ++ P V Sbjct: 26 GEISYDELPDFVIETPRDKTHGDFAANLALLLARQARQSPRNVAAAIVRHLERPQPGVAR 85 Query: 81 VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGH 140 V +AG GFIN L +L +L +++ YG + IG+G KV +EFVSANPTG +H+G+ Sbjct: 86 VEVAGPGFINFTLDNQWLLPVLPAVLAEDDHYGWSNIGQGAKVQVEFVSANPTGLLHMGN 145 Query: 141 CRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGY 200 R A +GD++A+L+ GY+VTRE+YINDAG QI LS+ RY QAL ++ +PE Sbjct: 146 ARGAALGDSIANLLTAVGYDVTREFYINDAGNQIENFGLSLEARYLQAL-GQEASIPEDG 204 Query: 201 YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y G L KY + L+ ++ ++++ + IR L+ + +D++ Sbjct: 205 YHGEDLVATVGRFIAKYGDKYLDTDPALRREMLVRFALEEKLDAIRRALEDFGVTYDVWF 264 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 SE H D + I +L + GY+YE L F++T GD Sbjct: 265 SEQSLH--DSGAVARAIADLEKAGYIYE----------------KDGALWFKATSFGDVK 306 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 D +++ +G TYFAAD+AY + K+ERGF+ +I + G+DH G+V RL+ A+ + Sbjct: 307 DEVVVRKNGIPTYFAADIAYHRNKFERGFERVINIWGADHHGHVARLKGALQALGYDPRR 366 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 + V+L +LVRLY+ G ++MSKR G ++TL +++EVG D+ R+ + K+ L+FD Sbjct: 367 LEVVLMQLVRLYQGGEILRMSKRTGQYVTLEELIEEVGRDAARYFFVMLKSDSHLEFDLD 426 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500 + QS +NPV+YVQYA+AR SI R AKD ++ P E D +EL+LI Sbjct: 427 LARSQSADNPVYYVQYAHARICSILRLAKDRG----LEVPPAREARLELLQDPAELELIK 482 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 +A +P + A A EP++L + +DLAS+FH ++ R V A++ ++ RL Sbjct: 483 QIAAWPDTVAGAAQALEPHRLTRFAHDLASLFHSFYTSCR-------VLADDPEVRKARL 535 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 LV A + + L+++GV +P M Sbjct: 536 VLVEATRITLRNVLHLLGVTAPERM 560 >gi|114778709|ref|ZP_01453521.1| arginyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1] gi|114551071|gb|EAU53633.1| arginyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1] Length = 576 Score = 557 bits (1436), Expect = e-156, Method: Composition-based stats. Identities = 248/588 (42%), Positives = 340/588 (57%), Gaps = 25/588 (4%) Query: 7 FSSRLKNYLKEIDCKI--KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 L+ L++ K+ + +V+ RP++ HG + N AM L+R L P I Sbjct: 5 VKQALEQALEQALIKLLQDHPDAAVPPVVLTRPKEKEHGDYAANVAMPLARVLKQSPQQI 64 Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR-NLIGKGTKV 123 A I+A + V++ +AG GFIN+ L + +L +I+ EYGR TKV Sbjct: 65 AANILAAVVWPDAVEAADVAGPGFINIRLKKASEANVLKTIIQQAEEYGRVAAAADATKV 124 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGPMHVGH R AVVGD LA+L+A +G V REYYINDAGAQI LA SV+ Sbjct: 125 NLEFVSANPTGPMHVGHGRGAVVGDALANLLAATGNHVQREYYINDAGAQIGVLAGSVWL 184 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKE-LADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 R ++ L + PE YPG Y+ + E LA LL E+ L ++ ++ A M Sbjct: 185 RMRE-LNGEQIEFPESAYPGEYIVQIATEVLAAHDYKTLLAMDEDARLALIGQLAIDANM 243 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 +IRDDL A+ I D++ SE H + + ++I+ L G VY G LPPPK K Sbjct: 244 AMIRDDLNAIGIHFDLYFSEQSLH--NSGRVNELIERLQADGVVYRGTLPPPKGKEVSDY 301 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 + LLFR+T GDDVDRPL K DG+ TYFAAD+AY K+ RGFD MI V G+DH G Sbjct: 302 -QPVEHLLFRTTDFGDDVDRPLAKQDGTATYFAADIAYHYDKHLRGFDRMIDVWGADHGG 360 Query: 363 YVKRLEAVAAAVSEKKA----QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 YV R++A A+ E +A Q +V+L ++V L RDG+P+KMSKRAG F+TLR VVDEVG Sbjct: 361 YVTRVQAAMKALIEPEAASAAQPDVILVQMVNLTRDGVPVKMSKRAGTFVTLREVVDEVG 420 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DF 477 D+VRF + R+ LDFD K+Q+ ENPV+YVQYA+AR +I R+A D + + Sbjct: 421 RDAVRFNFMTRRVESQLDFDLEAAKKQNDENPVYYVQYAHARIAAILRKASDEGVVVGEI 480 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 D +V+ E +L+ HL YP + A E Y++A Y LA+ FH + Sbjct: 481 DDVDLSVLTSH-----EEQRLVAHLLAYPEALLRAADRLEAYRVATYAMRLAADFHSFYH 535 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R V ++ LT+ R+ L+ AVA +I + L I+GV +P+ M Sbjct: 536 KHR-------VVTDDNNLTVARMLLIRAVAQVITNALGILGVSAPDRM 576 >gi|300933603|ref|ZP_07148859.1| arginyl-tRNA synthetase [Corynebacterium resistens DSM 45100] Length = 554 Score = 557 bits (1435), Expect = e-156, Method: Composition-based stats. Identities = 183/582 (31%), Positives = 289/582 (49%), Gaps = 34/582 (5%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRI-VIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 + SS + + + + ++ ++ +ERPR+ HG +TN AM +++ G +P Sbjct: 5 ELSSLITEHARTVLDAHDLDSSVVPETATVERPRNPEHGDYATNIAMQVAKKAGTNPREF 64 Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 + + +D +AG GFIN+ L+ KI++ I+ +G YG+ G K+N Sbjct: 65 GTWLAESLGAAEGIDEATVAGPGFINIRLAADAQGKIVTDILNAGENYGQGDEFAGKKIN 124 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGP+H+G R A VGD+L ++ G EVTREYY ND G QI+ A S+ Sbjct: 125 LEFVSANPTGPVHLGGTRWAAVGDSLGRILTKRGAEVTREYYFNDHGTQIDRFARSLVAA 184 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 + PE Y G Y++ + ++ + N EE + V+ M Sbjct: 185 AK------GQPTPEDGYGGDYIQDIANQITSAH-EGWENKSEEDLHEFFRAEGVELMFAH 237 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 I+ L + D++ E+ + + I L G +YE Sbjct: 238 IKRTLAEFGTEFDVYFHENSLF--ESGAVDKAIQTLKSNGNLYES--------------- 280 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 R++ GDD DR ++KSDG Y A D+AY K +RG D IY++G+DH GY+ Sbjct: 281 -EGAWWLRASNFGDDKDRVVIKSDGDAAYIAGDIAYIADKIDRGHDLCIYMLGADHHGYI 339 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 RL+A AAA+ Q+ V++ ++V L +DG ++MSKRAG ITL +V+ +G D+ R+ Sbjct: 340 ARLKAAAAALGYDPDQVEVMIGQMVNLVKDGKAVRMSKRAGTVITLDDLVELIGVDAARY 399 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 ++ LD D QS +NPVFYVQY +AR SI R+A + + +D ++ Sbjct: 400 ALIRSSVDSSLDIDMNLWASQSNDNPVFYVQYGHARLSSIARKADEAG--VTYDGADMSL 457 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 + E E D LI L E+P VI A +EP+++A Y LA FH + + P+ Sbjct: 458 LTHEREGD-----LIRTLGEFPEVIATAAELREPHRIARYAEHLAGTFHRFYDACQILPK 512 Query: 545 LRFVQANN-RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ ++ RL L A + + L ++GV +P M Sbjct: 513 ADQPTGSDADEVFRSRLALAAATRQTLANALALVGVSAPERM 554 >gi|295105829|emb|CBL03372.1| arginyl-tRNA synthetase [Gordonibacter pamelaeae 7-10-1-b] Length = 578 Score = 557 bits (1435), Expect = e-156, Method: Composition-based stats. Identities = 189/600 (31%), Positives = 313/600 (52%), Gaps = 40/600 (6%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + + + +E + +ERPRD A+G ++ AM ++ + Sbjct: 4 MQIREQLEQLIDAAVAAACKDGSLELEQAPEAALERPRDEANGDWASTVAMRSAKLAKKN 63 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P IA++IV + + V SV IAG GFIN+ L+PS L+ + + ++GR I +G Sbjct: 64 PREIAQIIVDHLPENDLVQSVDIAGPGFINIRLAPSALQGVAAQARAEKGDFGRGTIPEG 123 Query: 121 -TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 K+N+E++SANPTGP+HVGH R A +GD A +M +GY+V E+YINDAG Q++ Sbjct: 124 ERKINLEYISANPTGPLHVGHGRWAALGDATARVMRHAGYDVFEEFYINDAGTQMDNFGE 183 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RYQQ L D ++PE Y G Y+K + + + D+ + L+ ++ + ++ + Sbjct: 184 SVAVRYQQLL-GRDVEMPEACYAGSYVKDIAQAIIDEDGDKWLDADPKERMENFRERAYA 242 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKS 296 + + + + SE + D S + ++ + +GY+Y Sbjct: 243 YELAEQHRVTERFGTTFECWFSERSLYVPDETGKSAVDRSLEAMDAKGYIY--------- 293 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + F+S+ D+ DR L+K++G TYF +D+AY K ERGFD++I + Sbjct: 294 -------VKDGATWFKSSAFDDEKDRVLIKANGEMTYFMSDVAYHYNKMERGFDHLINIW 346 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G+DH GY+ R EA+ AA + ++L +LV L+RDG ++MSKR G+ IT ++DE Sbjct: 347 GADHHGYIARCEAMLAAWGW-PGALEIMLGQLVNLFRDGEAVRMSKRTGEMITFEELIDE 405 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP--- 473 VG D+ R++ML + + + +DFD K++ NPV+YVQYA+AR SI R+A D Sbjct: 406 VGVDATRYLMLAKSSDQPIDFDIEVAKKKDASNPVYYVQYAHARICSILRKAADPADAAA 465 Query: 474 ----DLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 ++ D VIP + + SEL L+ + ++ ++ A + ++L Y Sbjct: 466 AEAGEMSMDELAAKVIPADVDLSPLTHESELALMRKMDDFGPLVAQAARDRAAFRLTHYA 525 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 DLAS+FH +++ V +T RL LV A ++ L+++GV +P +M Sbjct: 526 QDLASLFHSFYTNCH-------VIGEEEAVTNARLALVDATRIVLAKTLDLLGVTAPAKM 578 >gi|283469905|emb|CAQ49116.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398] Length = 553 Score = 557 bits (1435), Expect = e-156, Method: Composition-based stats. Identities = 196/586 (33%), Positives = 309/586 (52%), Gaps = 34/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L + K + +I D I IE P+D +G +TN AM+L++ + Sbjct: 1 MNIIDQVKQTLVEEIAASINKAGLADEIPD-IKIEVPKDTKNGDYATNIAMVLTKIAKRN 59 Query: 61 PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ IV + + + IAG GFIN YL YL I+ + G ++G K Sbjct: 60 PREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G + +E+VSANPTG +H+GH R A VGD LA+++ +GY VTREYYINDAG QI LA Sbjct: 120 GQNILLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ R+ +AL +N +PE Y G + +GK+LA+K+ E+ ++ EE L + V+ Sbjct: 180 SIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKH-PEIKDYSEEARLKEFRKLGVE 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M +++DL N D + SE + + I +++ + GY YE Sbjct: 239 YEMAKLKNDLAEFNTHFDNWFSETSLY--EKGEILEVLAKMKELGYTYEA---------- 286 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 R+T DD DR L+K+DG+YTYF D+AY K +RG D +I + G+D Sbjct: 287 ------DGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A ++ + + ++VRL +G +KMSKR G+ ITLR ++DEVG Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGV 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R DFD KEQS++NPV+Y QYA+AR SI +QAK+ ++ Sbjct: 401 DAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEV---- 456 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + ++L+ +A++ IE+A + +++ Y+ DLAS FH ++ Sbjct: 457 --AAANDFTTITNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLASHFHKFYNAE 514 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ T + ++ AV + + L ++GV +P M Sbjct: 515 K-------VLTDDIVKTKAHVAMIEAVRITLKNALAMVGVSAPESM 553 >gi|212703468|ref|ZP_03311596.1| hypothetical protein DESPIG_01512 [Desulfovibrio piger ATCC 29098] gi|212673082|gb|EEB33565.1| hypothetical protein DESPIG_01512 [Desulfovibrio piger ATCC 29098] Length = 551 Score = 556 bits (1434), Expect = e-156, Method: Composition-based stats. Identities = 193/576 (33%), Positives = 319/576 (55%), Gaps = 32/576 (5%) Query: 11 LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 L++ L I ++ + + VIE PRD HG L+ N AM+L+R +P +A++ V Sbjct: 7 LRSALMGIVEEMGLN--WPAKAVIEPPRDPKHGDLAANIAMLLAREAHKNPRELAQVFVE 64 Query: 71 RIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129 ++ D++ V +AG GF N+ S + RK + + +G YG++ +G+G K +E+VS Sbjct: 65 KLPQRCADIEKVEVAGPGFCNVTFSQHFWRKTVCEVEAAGAAYGQSSVGQGRKTLVEYVS 124 Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189 ANPTGP+HVGH R A VGD+LA L+ +G++V EYYINDAG Q+ L LSV+ R ++ L Sbjct: 125 ANPTGPLHVGHGRGAAVGDSLARLLRKAGFDVETEYYINDAGRQMRILGLSVWLRVKE-L 183 Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249 + PE YY G Y+ + +E+ + L + ++ + ++ ++ I+ DL Sbjct: 184 AGRPVEWPEDYYRGSYIIDIAREMLAE-DPSLPDMEDQAGQDRCYERAMNEILDGIKADL 242 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 ++H + SE + ++ D L G+ ++ Sbjct: 243 ADFRVEHQHWFSEKTLV--ESGAVKAAFDALTEAGHTFD----------------KDGAF 284 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369 F + +GDD DR L KSDGS TYFA+D+AY K++RG+D +I + G+DH GYV R+ A Sbjct: 285 WFATQALGDDKDRVLRKSDGSLTYFASDIAYHHNKFQRGYDWLIDIWGADHHGYVPRMRA 344 Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429 A+ + + +V+L +LV L + G P+ MS RAG F TL VV EVG+D+ RFM L R Sbjct: 345 AITAMGKPRESFDVVLIQLVNLLQGGKPVSMSTRAGTFETLADVVKEVGADAARFMFLSR 404 Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489 K+ LDFD K++S +NPV+YVQYA+AR ++ R+A++ L + ++ Sbjct: 405 KSDTSLDFDLELAKQRSLDNPVYYVQYAHARICAVLRRAEERGITLPAAATDELLAALDT 464 Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549 ++ L+ +A + ++ A A + ++ YL DLA + H +++ + + Sbjct: 465 ---PEDMALLRKMAGFEDMVATAAQALAVHHVSHYLMDLAGMLHSYYAKHQ------VLL 515 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A++ T+ RL L+ AV+ ++ +GL+++GV +P M Sbjct: 516 ADDTARTLSRLALLRAVSQVLRNGLDLLGVSAPEVM 551 >gi|15923597|ref|NP_371131.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50] gi|156978936|ref|YP_001441195.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3] gi|255005401|ref|ZP_05144002.2| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|21542255|sp|Q932F6|SYR_STAAM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|166232846|sp|A7WZ56|SYR_STAA1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|14246375|dbj|BAB56769.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50] gi|156721071|dbj|BAF77488.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3] Length = 553 Score = 556 bits (1434), Expect = e-156, Method: Composition-based stats. Identities = 195/586 (33%), Positives = 309/586 (52%), Gaps = 34/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L + K + +I D I IE P+D +G +TN AM+L++ + Sbjct: 1 MNIIDQVKQTLVEEIAASINKAGLADEIPD-IKIEVPKDTKNGDYATNIAMVLTKIAKRN 59 Query: 61 PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ IV + + + IAG GFIN YL YL I+ + G ++G K Sbjct: 60 PREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G V +E+VSANPTG +H+GH R A VGD LA+++ +GY VTREYYINDAG QI LA Sbjct: 120 GQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ + +AL +N +PE Y G + +GK+LA+K+ E+ ++ EE L + V+ Sbjct: 180 SIETHFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKH-PEIKDYSEEARLKEFRKLGVE 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M +++DL N D + SE + + I +++ + GY YE Sbjct: 239 YEMAKLKNDLAEFNTHFDNWFSETSLY--EKGEILEVLAKMKELGYTYEA---------- 286 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 R+T DD DR L+K+DG+YTYF D+AY K +RG D +I + G+D Sbjct: 287 ------DGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A ++ + + ++VRL +G +KMSKR G+ ITLR ++DEVG Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGV 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R DFD KEQS++NPV+Y QYA+AR SI +QAK+ ++ Sbjct: 401 DAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEVTAAN 460 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + ++L+ +A++ IE+A + +++ Y+ DLA+ FH ++ Sbjct: 461 DFTTI------TNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLAAHFHKFYNAE 514 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ + T + ++ AV + + L ++GV +P M Sbjct: 515 K-------VLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM 553 >gi|120405304|ref|YP_955133.1| arginyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1] gi|166232813|sp|A1TD77|SYR_MYCVP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|119958122|gb|ABM15127.1| arginyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1] Length = 550 Score = 556 bits (1434), Expect = e-156, Method: Composition-based stats. Identities = 195/582 (33%), Positives = 291/582 (50%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LK + + ++ L IV +ERPR+ HG +TN A+ L + +G +P Sbjct: 4 ADLAELLKATAAAVLAEHGLDSAALPAIVTVERPRNPEHGDYATNLALQLGKKVGANPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + A + + + +AG GF+NL + S I+ ++ +G YG + G +V Sbjct: 64 LAGWLAAALVAKDGIAAADVAGPGFVNLRIEASAQNVIVGDVIAAGATYGASGELDGRRV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L++ G EV REYY ND GAQI+ S+ Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGAEVVREYYFNDHGAQIDRFTNSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + ++ K L P+ + + V M Sbjct: 184 AAK------GEPAPEDGYAGTYIADIAAQVLAKE-PGALELPDAEMRETFRAVGVNLMFD 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I++ L D++ ED H + I L G +YE Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMHT--SGRVDQAIAKLRETGSIYE--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 + R+T GDD DR ++KSDG Y A DLAYF K +RGFD IY++G+DH GY Sbjct: 280 -KDGAVWLRTTDFGDDKDRVVIKSDGQPAYIAGDLAYFLDKRKRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA+ + + VL+ ++V L RDG P++MSKRAG ITL +VD +G D+ R Sbjct: 339 IARLKAAAAALGDDPDTVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVDAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D S ENPV+YVQYA+AR ++ R A ++ D Sbjct: 399 YALIRSSVDTPIDIDLALWSSASNENPVYYVQYAHARLSALARNAAELGVAAD------- 451 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + E LI ++ E+PRV++ A +EP++++ YL DLA +H + R P Sbjct: 452 TAHLDLLTHDKEGTLIRNIGEFPRVLKTAASLREPHRVSRYLEDLAGDYHRFYDSCRVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L RL L A +I +GL I+GV +P M Sbjct: 512 QG---DETPGDLHAARLALCAATRQVIANGLGILGVSAPERM 550 >gi|325844324|ref|ZP_08168100.1| arginine--tRNA ligase [Turicibacter sp. HGF1] gi|325489191|gb|EGC91573.1| arginine--tRNA ligase [Turicibacter sp. HGF1] Length = 553 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 193/585 (32%), Positives = 325/585 (55%), Gaps = 34/585 (5%) Query: 3 LFADFSSRLKNYLKEIDCK-IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 + LK +K+ + + +++E +D +HG STN AM L++ +P Sbjct: 1 MIQTLKENLKAEIKQAVLTCGYITESDDLNVILENSKDVSHGDYSTNIAMQLTKIAKKNP 60 Query: 62 LTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 IAE I+ +V+ + IAG GFIN ++ S + + +I+ G E+G + G G Sbjct: 61 RMIAEEILNNFNAESANVEKIEIAGPGFINFFMKKSAFTQSIKNIIELGHEFGTSKSGNG 120 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 K N+E+VSANPTG +H+GH R A +GD+L ++ +GY+VTREYY+NDAG QI+ L +S Sbjct: 121 LKYNVEYVSANPTGDLHLGHARGAALGDSLCRILTKAGYDVTREYYVNDAGNQIHNLVIS 180 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 + RY QAL ++++PE Y G + +G+ + ++Y L+N +E + ++++ S++ Sbjct: 181 AYARYLQAL-GLEAEMPEDGYHGPDIIALGQSMVEQYGDRLVNKLDENY-KLIREMSLEY 238 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 + IR DL ++ D++ SE + + D + +++ I L +G++YE Sbjct: 239 ELNKIRKDLDMFGVEFDMYTSEQELY--DNNLVQESIKLLEEKGFIYE------------ 284 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + + FRST GDD DR L KSDGSYTY D+A K +RG D ++ + G+DH Sbjct: 285 ----EDGAVWFRSTDFGDDKDRVLKKSDGSYTYLTPDIANHIEKLKRGNDKLVDIWGADH 340 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY+ R++A A+ + ++ V + ++VRL +DG KMSKR G +T+R +VDEVG D Sbjct: 341 HGYIARVKASMQALGYEADKLEVDIIQMVRLIKDGEEFKMSKRTGKAVTIRELVDEVGVD 400 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +VR+ + R +DFD ++S ENPV+Y QYA+AR SI RQA++ +++ Sbjct: 401 AVRYFFVMRSGETQMDFDLDLATKKSNENPVYYAQYAHARTCSILRQAEEKGFNVELKDQ 460 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 ++ E ++I + ++P V+ +A + P+ + Y+ DLA+ FH ++ Sbjct: 461 YNHI------THEKEFEVIKLMGDFPIVVADAANKRRPHLICNYINDLATAFHSLYNAE- 513 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + N + T +L L+ A+ I + L +IGV +P M Sbjct: 514 -----KVINEENVEKTNEKLALIKALEITIKNALELIGVSAPERM 553 >gi|218885953|ref|YP_002435274.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226701474|sp|B8DNX4|SYR_DESVM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|218756907|gb|ACL07806.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 551 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 208/579 (35%), Positives = 321/579 (55%), Gaps = 32/579 (5%) Query: 8 SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 +L L+ I + + ++ +E PRD + G L+ N A+++S+ G+ P +A Sbjct: 4 RQQLLASLQAIVKDMGL--SWPEKATLEPPRDKSFGDLAANIALVISKDAGVPPRELASR 61 Query: 68 IVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 + + DP + SV IAG GF+N+ SP + R+ + + +G YG +G G K +E Sbjct: 62 LAGALRDSDPAIASVDIAGPGFLNVTYSPDFWRETVLHVEAAGDRYGATAVGAGRKAQVE 121 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 +VSANPTGP+H+GH R A +GD LA ++ F+GY+VT EYYINDAG Q+ L LSV+ R Sbjct: 122 YVSANPTGPLHIGHGRGAALGDCLARVLRFAGYDVTTEYYINDAGRQMRLLGLSVWLRAL 181 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 + L LPE +Y G Y+K + E+ K L++ PE + +Y++ ++M I+ Sbjct: 182 E-LSGRPFTLPEDFYRGDYIKDIAAEMLAK-DPGLVDLPEAEGQDRCFEYAMNSIMDGIK 239 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 DL ++H ++ SE R + + L G +E Sbjct: 240 QDLADFRVEHQVWFSELSLVR--EGAVEKTFERLKAAGLAFE----------------QD 281 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366 L FR+T +GDD DR L KSDG+ TYFA+D+AY KY+RGFD ++ + G+DH GYV R Sbjct: 282 GALWFRTTTLGDDKDRVLRKSDGTLTYFASDIAYHDNKYDRGFDLVVDIWGADHHGYVPR 341 Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 + A AA+ ++ Q +V+L +LV L ++G I MS RAG F TL VV EVG+D+ RFM Sbjct: 342 MRAAVAALGKRPEQFDVILVQLVNLLQNGEQIAMSTRAGQFETLHDVVREVGADAARFMF 401 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 L RK+ LDFD VK++S +NPV+YVQYA+AR ++ R+A + L L + P Sbjct: 402 LSRKSDSHLDFDLELVKQRSMDNPVYYVQYAHARVCAVLRKAAERAIVLPARLDAAALAP 461 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 EL L+ + P + A P+ ++FYL ++A H +++ ++ Sbjct: 462 LTL---PEELDLLRLVDRMPDTLSAAAEGLAPHHVSFYLMEVAGALHSYYA------KVP 512 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A + + + RL L+ AV + +GLN++GVE+P M Sbjct: 513 VLNAADAETIVARLALLRAVGQAVANGLNLLGVEAPEAM 551 >gi|194364058|ref|YP_002026668.1| arginyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3] gi|238693501|sp|B4STE2|SYR_STRM5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|194346862|gb|ACF49985.1| arginyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3] Length = 562 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 189/587 (32%), Positives = 305/587 (51%), Gaps = 37/587 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 + + ++ + + L V+ERP+ HG +TNAAM+L++ +P +A Sbjct: 5 LRALISQGIEALRANGTLPADSLPPDFVVERPKTRDHGDFATNAAMLLAKAARSNPRALA 64 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 + +V + DV V IAG GFIN YL+P+ ++ +S++ G +YGRNL G G V + Sbjct: 65 QALVEALPRSEDVSKVEIAGPGFINFYLAPAAYQREAASVIKEGHDYGRNLSGNGRTVGV 124 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 E+VSANPTGP+HVGH R A +GD +A ++ +G+ RE+Y NDAG QI L+LSV R Sbjct: 125 EYVSANPTGPLHVGHGRAAAIGDCVARVLDANGWNAKREFYYNDAGVQIENLSLSVQAR- 183 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDYSVQA 240 + + + PEG Y G Y+ V + D + ++ + K + ++ ++V Sbjct: 184 VKGIAPDQDGWPEGGYRGEYIADVARAYMAGASVDLEGTLVVGAKDAKDMQAIRRFAVAY 243 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 + DL A + DI+ E + + + + L G+ YE Sbjct: 244 LRNEQNLDLAAFGVDFDIYFLESSLYA--DGKVAEAVAKLQASGHTYE------------ 289 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + L RST GDD DR + KSDG++TYF D+AY K++RG++ I +G+DH Sbjct: 290 ----EGGALWLRSTDFGDDKDRVMRKSDGTFTYFVPDVAYHLSKWQRGYERAITELGADH 345 Query: 361 SGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 G + R+ A A+ + +L ++V + R G +K+SKRAG + TLR +++E G Sbjct: 346 HGSLARVRAGLQAMEVGIPQGWPEYVLHQMVTVMRGGEEVKLSKRAGSYFTLRDLIEEAG 405 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ ++ RK L FD ++QS +NPVFYVQYA+AR S+ RQA++ + Sbjct: 406 RDATRWFLIARKPDSQLTFDIDLARQQSNDNPVFYVQYAHARVCSLLRQAQEKGLVYEQG 465 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + D + L L+ ++ YP V+E A +A EP+ +A YL +LA FH + Sbjct: 466 ---NGLANLGRLSDDASLLLMNEISRYPEVVEAAGVALEPHLVAQYLRELAHAFHTWYHG 522 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V ++ +L L A ++ +GL ++GV +P +M Sbjct: 523 T-------PVLVDDSADRNAKLTLACAARQVLANGLELLGVSAPEKM 562 >gi|126436460|ref|YP_001072151.1| arginyl-tRNA synthetase [Mycobacterium sp. JLS] gi|166232809|sp|A3Q3D3|SYR_MYCSJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|126236260|gb|ABN99660.1| arginyl-tRNA synthetase [Mycobacterium sp. JLS] Length = 550 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 191/582 (32%), Positives = 286/582 (49%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + L+ + + ++ L + +ERPR+ HG +TN A+ + + +G++P Sbjct: 4 ADLADLLRTTATAVLTERDLDTAALPATVTVERPRNPEHGDYATNLALQVGKKVGVNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + + S +AG GF+NL + + I+ I+ S YG + + Sbjct: 64 LAGWLAEALTAAAGIASAEVAGPGFVNLRIEAAAQNVIVGDIITSAERYGHSAALAERNI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L+A G V REYY ND GAQI+ S+ Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLATQGAAVVREYYFNDHGAQIDRFVSSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + ++ K L P+ + + V M Sbjct: 184 AAK------GEPTPEDGYAGSYIGDIAAQVLAK-DPGALELPDGEMRETFRAIGVDLMFD 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L D+F ED H + + I L G +YE Sbjct: 237 HIKISLHDFGTDFDVFTHEDSMHT--SGRVEEAIARLRENGAIYE--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 R+T GDD DR ++KSDG+ Y A DLAYF K +RGFD IY++G+DH GY Sbjct: 280 -KDGATWLRTTDFGDDKDRVVIKSDGAPAYIAGDLAYFLDKRQRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA+ + + V++ ++V L RDG P++MSKRAG ITL +V+ +G D+ R Sbjct: 339 IARLKAAAAALGDDPDTVEVMIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D S ENPV+YVQYA+AR ++ R A D+ D Sbjct: 399 YSLIRSSVDTPIDIDLALWSSASNENPVYYVQYAHARLSALARNAADLGVVAD------- 451 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + E LI +L E+PRV+E+A +EP+++ YL DLA +H + R P Sbjct: 452 TARLDLLTHDKEGTLIRNLGEFPRVLESAAALREPHRVCRYLEDLAGDYHRFYDSCRVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L RL L A +I +GL I+GV +P M Sbjct: 512 QG---DEAPGSLHQARLALCQATRQVIANGLAILGVSAPERM 550 >gi|317487839|ref|ZP_07946432.1| arginyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA] gi|316913114|gb|EFV34630.1| arginyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA] Length = 578 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 182/600 (30%), Positives = 308/600 (51%), Gaps = 40/600 (6%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + + + + + +ERPRD ++G ++ AM ++ + Sbjct: 4 MQIREQLEQLIDAAVAAACEDGTLTLEQAPEAALERPRDESNGDWASTVAMRSAKLAKKN 63 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P IA++IV + + + SV IAG GFIN+ L+ + L+ ++++ ++G+ I +G Sbjct: 64 PREIAQIIVDHLPENDMIASVDIAGPGFINIRLANAVLQGVVAAARAEKDDFGKGEIPEG 123 Query: 121 -TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 K+N+E++SANPTGP+HVGH R A +GD A +M +GY+V E+YINDAG Q++ Sbjct: 124 ERKINLEYISANPTGPLHVGHGRWAALGDATARVMRHAGYDVFEEFYINDAGTQMDNFGE 183 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RYQQ L D ++PE Y G Y+K + + + D+ + L+ ++ + ++ + Sbjct: 184 SVAVRYQQLL-GRDVEMPEACYAGSYVKDIAQTIIDEDGDKWLDADPKERMENFRERAYA 242 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKS 296 + + + SE + D + + + +GY+Y Sbjct: 243 YELAEQHRVTERFGTTFGCWFSERSLYVPDEDGLSAVDRSLKAMDEKGYIY--------- 293 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 ++ FRS+ D+ DR L+K++G TYF +D+AY K ERGFD++I + Sbjct: 294 -------VEDGATWFRSSAFDDEKDRVLIKANGEMTYFMSDVAYHYNKMERGFDHLINIW 346 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G+DH GY+ R EA+ AA + ++L +LV L+RDG ++MSKR G+ IT ++DE Sbjct: 347 GADHHGYIARCEAMLAAWGW-PGALEIMLGQLVNLFRDGEAVRMSKRTGEMITFEELIDE 405 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ-------AK 469 VG D+ R++ML + + + +DFD K++ NPV+YVQYA+AR SI R+ Sbjct: 406 VGVDATRYLMLAKSSDQPIDFDIEVAKKKDASNPVYYVQYAHARICSILRKAADPADAEA 465 Query: 470 DIFPDLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 D+ D VIP + SEL L+ + ++ ++ A + ++L Y Sbjct: 466 AANGDMSMDDLASKVIPANVDLSPLTHESELALMRKMDDFGPLVAQAARDRAAFRLTHYA 525 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 DLAS+FH +++ V +T RL LV A ++ L+++GV +P +M Sbjct: 526 QDLASLFHSFYTNCH-------VIGEEEAVTNARLALVDATRIVLAKTLDLLGVSAPAKM 578 >gi|319948886|ref|ZP_08022998.1| arginyl-tRNA synthetase [Dietzia cinnamea P4] gi|319437445|gb|EFV92453.1| arginyl-tRNA synthetase [Dietzia cinnamea P4] Length = 550 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 197/582 (33%), Positives = 299/582 (51%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD ++ ++ L + + + ++ + +ERPR+ HG +TN A+ L++ +G P Sbjct: 4 ADLAAVIRAALIAVLTERGADTSVVPETVTVERPRNPEHGDYATNVALQLAKKIGSAPRD 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A+ + + DP + S IAG GF+N+ L ++++++ G YG G +V Sbjct: 64 LAQALADALAQDPGIASAEIAGPGFLNIRLDSGAQGSLVATVLEKGERYGYGDAMAGRRV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L ++ SG EVTREYY ND GAQI+ + S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRVLEASGAEVTREYYFNDHGAQIDRFSRSLAA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + + PE Y G Y++ + ++ + +L+ PE++ L + V M Sbjct: 184 AAR------GEETPEDGYAGAYIQDIAAQVMTAH-PGVLDMPEDQALETFRAAGVDLMFS 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+D L D++ E+ + I+ L G +YE Sbjct: 237 HIKDSLAEFGTVFDVYTHENSMFT--SGAVDRAIETLKGNGNLYES-------------- 280 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 RST GDD DR +LKSDG Y A D+AYF K ERGFD IY++G+DH GY Sbjct: 281 --EGAWWLRSTAFGDDKDRVVLKSDGDAAYIAGDIAYFLDKRERGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA+ + A I VL+ ++V L RDG P+KMSKRAG ITL +VD +G D+ R Sbjct: 339 IARLKAAAAALGDDPATIEVLIGQMVNLVRDGEPVKMSKRAGTVITLDDLVDAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ + +D D + +NPVFYVQYA+AR S+ R A D+ + Sbjct: 399 YALIRSSVDQTMDIDLKLWTSATNDNPVFYVQYAHARLCSLARNAADLGVTTEGADLAL- 457 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + E LI + E+PRV+ +A +EP+++A YL +LA +H + R P Sbjct: 458 ------LVEDREGALIRTIGEFPRVVASAADLREPHRVARYLEELAGAYHRFYDTCRVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L RL L A + +GL +IGV +P M Sbjct: 512 MG---DEEPGPLHAARLALSSATRQTLANGLRLIGVTAPERM 550 >gi|253997684|ref|YP_003049748.1| arginyl-tRNA synthetase [Methylotenera mobilis JLW8] gi|253984363|gb|ACT49221.1| arginyl-tRNA synthetase [Methylotenera mobilis JLW8] Length = 552 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 192/586 (32%), Positives = 300/586 (51%), Gaps = 41/586 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + L L I E L+ I++ERP+ HG +TN A+IL++PL +P IA Sbjct: 1 MKTHLTQLLTAAAKSIAPELTDLN-IILERPKSADHGDFATNLALILAKPLKQNPRAIAT 59 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 I+ + + IAG GFIN +LSP + ++ I+ +G +YGRN GK KV +E Sbjct: 60 QIIEALPTSEYIAKTEIAGAGFINFFLSPQSKQVVIKDILNAGAQYGRNSSGKQQKVQVE 119 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+HVGH R A VGD LA L+ +G++VTRE+Y NDAGAQI+ L +SV R Sbjct: 120 FVSANPTGPLHVGHGRGAAVGDCLARLLDANGWDVTREFYYNDAGAQIDNLTISVLARC- 178 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSS-----ELLNFPEEKWLPIVKDYSVQAM 241 + + PE Y G Y+ + K++ E+ + L ++ +SV + Sbjct: 179 KGISTEHESFPENGYRGEYINDIAAAFLAKHTVVADDIEVTASGDINDLNSIRAFSVAYL 238 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 DLKA I+ D+F E + + + L + G+ YE Sbjct: 239 RHEQDLDLKAFQIKFDVFSLESALYT--TGKVEQTVQALIKSGHTYE------------- 283 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 L ++T GDD DR + K+DG YTYF D+AY K+ RGF +I G+DH Sbjct: 284 ---QDDALWLKTTDFGDDKDRVMRKTDGGYTYFVPDVAYHTDKWNRGFVRVINEQGADHH 340 Query: 362 GYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 + R+ A A+ + + +L ++V + R G +K+SKRAG ++TLR +++EVG Sbjct: 341 STITRVRAGLQAMDIGIPQGWPDYVLHQMVTVMRGGEEVKLSKRAGSYVTLRDLIEEVGC 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R+ L FD + QS +NPV+Y+QYA+AR S+ Q + D+ Sbjct: 401 DATRYFLAARRADSQLVFDIDLARSQSNDNPVYYIQYAHARICSVLSQW-------NGDV 453 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + E L+ L+EYP ++ N+ P+ +A YL +LAS H +++ Sbjct: 454 SSLAHVNLNPLTTAHETALMQRLSEYPEIVANSATELAPHVVANYLKELASDLHSYYNEY 513 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +L + RL L+ A ++ +GL+++GV + M Sbjct: 514 KF-------LIEDEQLKLARLSLISATQQVLKNGLDLLGVTAKERM 552 >gi|282928743|ref|ZP_06336338.1| arginyl-tRNA synthetase [Staphylococcus aureus A10102] gi|282589626|gb|EFB94713.1| arginyl-tRNA synthetase [Staphylococcus aureus A10102] Length = 553 Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 196/586 (33%), Positives = 310/586 (52%), Gaps = 34/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L + K + +I D I IE P+D +G +TN AM+L++ + Sbjct: 1 MNIIDQVKQTLVEEIAASINKAGLADEIPD-IKIEVPKDTKNGDYATNIAMVLTKIAKRN 59 Query: 61 PLTIAELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ IV + + + IAG GFIN YL YL I+ + G ++G K Sbjct: 60 PCEIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G V +E+VSANPTG +H+GH R A VGD LA+++ +GY VTREYYINDAG QI LA Sbjct: 120 GQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLAR 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ R+ +AL +N +PE Y G + +GK+LA+K+ E+ ++ EE L + V+ Sbjct: 180 SIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKH-PEIKDYSEEARLKEFRKLGVE 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M +++DL N D + SE + + I +++ + GY YE Sbjct: 239 YEMAKLKNDLAEFNTHFDNWFSETSLY--EKGEILEVLAKMKELGYTYEA---------- 286 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 R+T DD DR L+K+DG+YTYF D+AY K +RG D +I + G+D Sbjct: 287 ------DGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A ++ + + ++VRL +G +KMSKR G+ ITLR ++DEVG Sbjct: 341 HHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGV 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R DFD KEQS++NPV+Y QYA+AR SI +QAK+ ++ Sbjct: 401 DAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEVTAAN 460 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + ++L+ +A++ IE+A + +++ Y+ DLA+ FH ++ Sbjct: 461 DFTTI------TNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLAAHFHKFYNAE 514 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ + T + ++ AV + + L ++GV +P M Sbjct: 515 K-------VLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM 553 >gi|134102736|ref|YP_001108397.1| arginyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338] gi|291007807|ref|ZP_06565780.1| arginyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338] gi|166232837|sp|A4FN47|SYR_SACEN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|133915359|emb|CAM05472.1| arginyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338] Length = 553 Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 200/583 (34%), Positives = 303/583 (51%), Gaps = 35/583 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 A + L+N ++ ++ ++ + +ERPR+ HG +TN AM +++ G+ P Sbjct: 4 AALAELLRNTAVDVLASRDLDTSVIPAAVTVERPRNPEHGDYATNIAMQVAKKAGVAPRD 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + +DSV +AG GF+NL L+ +IL ++ + YGR +G KV Sbjct: 64 LAGWLAEALTGQDGIDSVEVAGPGFLNLRLAADAQGQILREVLDATDAYGRGAKYQGLKV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L + G EVTREYY NDAGAQI+ S+ Sbjct: 124 NLEFVSANPTGPVHLGGTRWAAVGDALGRTLEAQGAEVTREYYFNDAGAQIDRFVRSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + ++ + + L+ PE + + V M Sbjct: 184 AAR------GEAAPEDGYGGAYIGEIANQVLEAEPTA-LDLPEAERHETFRRIGVGLMFD 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 ++ L + D++ ED H + ++ L G++Y Sbjct: 237 EVKRSLHDFGVDFDVYFHEDSLHT--SGAVEKSVEQLKESGHLYFA-------------- 280 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 RST GDD DR L+KSDG+ Y A D+AY + K RGFD IY++G+DH GY Sbjct: 281 --DGAWWLRSTEFGDDKDRVLIKSDGTTAYIAGDVAYLRDKRNRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA + + VL+ ++V L +DG P++MSKRAG + L +VD VG D+ R Sbjct: 339 IPRLKAAAAAFDDDPDAVEVLIGQMVNLVKDGKPVRMSKRAGTVLRLEDLVDAVGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPR 482 + ++ LD D + ++S ENPVFYVQYA+AR S+ R A + D Sbjct: 399 YSLIRSSVDSALDIDLDLISKRSNENPVFYVQYAHARLSSLQRNAASLGIDRGSVADADL 458 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 +++ E E D LI L EYPRV+ +A +EP+++A YL DLAS +H + R Sbjct: 459 SLLTHEREGD-----LIRTLGEYPRVVRSAAELREPHRIARYLEDLASAYHKFYDACR-- 511 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L+ LT+ RLQL A ++ +GL ++GV +P +M Sbjct: 512 -VLQPGDDQATPLTIARLQLCEAARQVLANGLGLLGVSAPEQM 553 >gi|325830658|ref|ZP_08164079.1| arginine--tRNA ligase [Eggerthella sp. HGA1] gi|325487404|gb|EGC89846.1| arginine--tRNA ligase [Eggerthella sp. HGA1] Length = 575 Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 182/600 (30%), Positives = 308/600 (51%), Gaps = 40/600 (6%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + + + + + +ERPRD ++G ++ AM ++ + Sbjct: 1 MQIREQLEQLIDAAVAAACEDGTLTLEQAPEAALERPRDESNGDWASTVAMRSAKLAKKN 60 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P IA++IV + + + SV IAG GFIN+ L+ + L+ ++++ ++G+ I +G Sbjct: 61 PREIAQIIVDHLPENDMIASVDIAGPGFINIRLANAVLQGVVAAARAEKDDFGKGEIPEG 120 Query: 121 -TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 K+N+E++SANPTGP+HVGH R A +GD A +M +GY+V E+YINDAG Q++ Sbjct: 121 ERKINLEYISANPTGPLHVGHGRWAALGDATARVMRHAGYDVFEEFYINDAGTQMDNFGE 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RYQQ L D ++PE Y G Y+K + + + D+ + L+ ++ + ++ + Sbjct: 181 SVAVRYQQLL-GRDVEMPEACYAGSYVKDIAQTIIDEDGDKWLDADPKERMENFRERAYA 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKS 296 + + + SE + D + + + +GY+Y Sbjct: 240 YELAEQHRVTERFGTTFGCWFSERSLYVPDEDGLSAVDRSLKAMDEKGYIY--------- 290 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 ++ FRS+ D+ DR L+K++G TYF +D+AY K ERGFD++I + Sbjct: 291 -------VEDGATWFRSSAFDDEKDRVLIKANGEMTYFMSDVAYHYNKMERGFDHLINIW 343 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G+DH GY+ R EA+ AA + ++L +LV L+RDG ++MSKR G+ IT ++DE Sbjct: 344 GADHHGYIARCEAMLAAWGW-PGALEIMLGQLVNLFRDGEAVRMSKRTGEMITFEELIDE 402 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ-------AK 469 VG D+ R++ML + + + +DFD K++ NPV+YVQYA+AR SI R+ Sbjct: 403 VGVDATRYLMLAKSSDQPIDFDIEVAKKKDASNPVYYVQYAHARICSILRKAADPADAEA 462 Query: 470 DIFPDLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 D+ D VIP + SEL L+ + ++ ++ A + ++L Y Sbjct: 463 AANGDMSMDDLASKVIPANVDLSPLTHESELALMRKMDDFGPLVAQAARDRAAFRLTHYA 522 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 DLAS+FH +++ V +T RL LV A ++ L+++GV +P +M Sbjct: 523 QDLASLFHSFYTNCH-------VIGEEEAVTNARLALVDATRIVLAKTLDLLGVSAPAKM 575 >gi|300781429|ref|ZP_07091283.1| arginine--tRNA ligase [Corynebacterium genitalium ATCC 33030] gi|300533136|gb|EFK54197.1| arginine--tRNA ligase [Corynebacterium genitalium ATCC 33030] Length = 591 Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 192/582 (32%), Positives = 291/582 (50%), Gaps = 30/582 (5%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD ++ ++ E ++ ++ + +ERPR+ HG +TN A+ +++ G +P Sbjct: 39 ADLAATVRAITTETLDAHGLDSSVVPETVTVERPRNPEHGDYATNVALQVAKKAGTNPRE 98 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A ++ + P++DS +AG GFINL L + I++ I+ G YG + I G K+ Sbjct: 99 LAGWLIDALVALPEIDSADVAGPGFINLRLGAAATGGIVADILAKGEAYGSSDIYDGEKI 158 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++ FSG EVTREYY ND G QI+ A S+ Sbjct: 159 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEFSGAEVTREYYFNDHGGQIDRFARSLVA 218 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + + + + +L + V+ M Sbjct: 219 AAKN------EPTPEDGYGGEYIADIASAVVAE-NPGILEGDAAVVQEAFRREGVEKMFA 271 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L D+F E+ + + I L G +YE Sbjct: 272 QIKQSLHDFGTDFDVFFHENSLF--ESGAVDRAIQTLKDNGNLYEN-------------- 315 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 RST GDD DR +LKSDG Y A D+AY K++RG IY++G+DH GY Sbjct: 316 --DGAWWLRSTDFGDDKDRVVLKSDGDAAYIAGDIAYVADKFDRGHTLAIYMLGADHHGY 373 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL A A A+ + VL+ ++V L RDG P+KMSKRAG ITL +VD +G D+ R Sbjct: 374 IARLRAAAQALGYNPEAVEVLIGQMVNLVRDGQPVKMSKRAGTVITLDDLVDVIGVDAAR 433 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + M+ LD D ++QS +NPV+YVQY + R SI R+A + L Sbjct: 434 YSMVRSSVDSTLDIDLDLWEKQSNDNPVYYVQYGHTRLASIERKAAEAGVVLARSDDDEE 493 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 V E LI L E+P V++ A +EP+++A Y +LASVFH + + P Sbjct: 494 V-DLSLLTHEKEGDLIRTLGEFPAVVKAAAELREPHRIARYAEELASVFHKFYDACQILP 552 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + + RL L A ++ + L ++GV +P M Sbjct: 553 K---AGEDPQPIHAARLTLASASRQVLANALRLLGVTAPERM 591 >gi|257791691|ref|YP_003182297.1| arginyl-tRNA synthetase [Eggerthella lenta DSM 2243] gi|257475588|gb|ACV55908.1| arginyl-tRNA synthetase [Eggerthella lenta DSM 2243] Length = 575 Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 182/600 (30%), Positives = 308/600 (51%), Gaps = 40/600 (6%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + + + + + +ERPRD ++G ++ AM ++ + Sbjct: 1 MQIREQLEQLIDAAVAAACEDGTLTLEQAPEAALERPRDESNGDWASTVAMRSAKLAKKN 60 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P IA++IV + + + SV IAG GFIN+ L+ + L+ ++++ ++G+ I +G Sbjct: 61 PREIAQIIVDHLPENDMIASVDIAGPGFINIRLANAVLQGVVAAARAEKDDFGKGEIPEG 120 Query: 121 -TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 K+N+E++SANPTGP+HVGH R A +GD A +M +GY+V E+YINDAG Q++ Sbjct: 121 ERKINLEYISANPTGPLHVGHGRWAALGDATARVMRHAGYDVFEEFYINDAGTQMDNFGE 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RYQQ L D ++PE Y G Y+K + + + D+ + L+ ++ + ++ + Sbjct: 181 SVAVRYQQLL-GRDVEMPEACYAGSYVKDIAQTIIDEDGDKWLDADPKERMENFRERAYA 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPS---PIRDIIDNLARQGYVYEGILPPPKS 296 + + + SE + D + + + +GY+Y Sbjct: 240 YELAEQHRVTERFGTTFGCWFSERSLYVPDEDGLSAVDRSLKAMDEKGYIY--------- 290 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 ++ FRS+ D+ DR L+K++G TYF +D+AY K ERGFD++I + Sbjct: 291 -------VEDGATWFRSSAFDDEKDRVLIKANGEMTYFMSDVAYHYNKMERGFDHLINIW 343 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G+DH GY+ R EA+ AA + ++L +LV L+RDG ++MSKR G+ IT ++DE Sbjct: 344 GADHHGYIARCEAMLAAWGW-PGALEIMLGQLVNLFRDGEAVRMSKRTGEMITFEELIDE 402 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ-------AK 469 VG D+ R++ML + + + +DFD K++ NPV+YVQYA+AR SI R+ Sbjct: 403 VGVDATRYLMLAKSSDQPIDFDIEVAKKKDASNPVYYVQYAHARICSILRKAADPADAEA 462 Query: 470 DIFPDLDFDLFPRNVIPQESEF----DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYL 525 D+ D VIP + SEL L+ + ++ ++ A + ++L Y Sbjct: 463 AANGDMSMDELASKVIPANVDLSPLTHESELALMRKMDDFGPLVAQAARDRAAFRLTHYA 522 Query: 526 YDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 DLAS+FH +++ V +T RL LV A ++ L+++GV +P +M Sbjct: 523 QDLASLFHSFYTNCH-------VIGEEEAVTNARLALVDATRIVLAKTLDLLGVSAPAKM 575 >gi|325673536|ref|ZP_08153227.1| arginine--tRNA ligase [Rhodococcus equi ATCC 33707] gi|325555557|gb|EGD25228.1| arginine--tRNA ligase [Rhodococcus equi ATCC 33707] Length = 550 Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 190/582 (32%), Positives = 300/582 (51%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + L+ ++ + ++ +L + +ERPR+ HG ++N AM +++ G +P Sbjct: 4 ADLAELLRGTAAKVLAEHGLDVSVLPATLTVERPRNPEHGDYASNVAMQVAKKAGANPRD 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + A + +DS +AG GF+N+ L+ I++ + SG YG G ++ Sbjct: 64 LATWLAAALAASDGIDSAEVAGPGFLNIRLAADAQGAIVAKALESGAAYGAGDALAGKRI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L ++A G +VTREYY ND GAQI+ S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRILATQGGDVTREYYFNDHGAQIDRFTRSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 Q PE Y G Y+ + ++ K L+ PE + + V+ M + Sbjct: 184 AAQ------GEPAPEDGYAGAYIVDIAADV-QKQVPGALDLPEAERHETFRSIGVELMFE 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L + D++ E+ + + ++ L G +Y Sbjct: 237 HIKRTLHEFGVDFDVYFHENSLF--ESGAVERAVETLKGSGNLYH--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 + +ST GDD DR ++KSDG+ Y A D+AYF+ K RGFD IY++G+DH GY Sbjct: 280 -EDGAWWLKSTDFGDDKDRVVIKSDGNAAYIAGDIAYFQDKRARGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA + + V++ ++V L R G+ +KMSKRAG ITL +V+ +G D+ R Sbjct: 339 IGRLKAAAAAFGDDPDTVEVMIGQMVNLVRGGVAVKMSKRAGTVITLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ + +D D + ENPV+YVQYA+AR SI R A D+ L + Sbjct: 399 YSLVRSSVDQSIDIDLELWASTTNENPVYYVQYAHARLCSIARNAADLG--LGTENPNLG 456 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ + E D LI +AEYPRV+ A +EP+++A YL +LA +H + R P Sbjct: 457 LLTHDREGD-----LIRTIAEYPRVVAKAAELREPHRIARYLEELAGTYHRFYDACRILP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + LT RL L A ++ +GL ++GV +P M Sbjct: 512 QG---DEEATDLTTARLALCAASRQVLANGLELLGVSAPERM 550 >gi|41408568|ref|NP_961404.1| arginyl-tRNA synthetase [Mycobacterium avium subsp. paratuberculosis K-10] gi|81413777|sp|Q73X40|SYR_MYCPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|41396926|gb|AAS04787.1| ArgS [Mycobacterium avium subsp. paratuberculosis K-10] Length = 550 Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 191/582 (32%), Positives = 291/582 (50%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + L+N + + ++ L +V+ERPR+ HG ++N A+ L + +G +P Sbjct: 4 ADLAELLRNTAAAVLAERGLDAAALPATVVVERPRNPEHGDYASNLALQLGKKVGANPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + A + + S +AG GFINL L S ++++++ +G YG + + Sbjct: 64 LAGWLAAALAETDGIASAEVAGPGFINLRLEASAQAVVVTNVLDAGDRYGHSDAQSTHNI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L++ G V REYY ND GAQI+ A S+ Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGAGVVREYYFNDHGAQIDRFASSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + ++ + L+ PE + + V M Sbjct: 184 AAK------GEPTPEDGYAGSYINDIAAQVLRQAPDA-LSLPEPQLRETFRAIGVDLMFT 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I++ L D++ ED H + I L G +YE Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMHT--SGRVDQAIARLRETGNIYE--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 R++ GDD DR ++KSDG Y A D+AY+ K +RGFD IY++G+DH GY Sbjct: 280 -KDGATWLRTSAFGDDKDRVVIKSDGKPAYIAGDIAYYLDKRQRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+AVAAA + A + VL+ ++V L RDG P++MSKRAG ITL +V+ +G D+ R Sbjct: 339 IARLKAVAAAFGDDPATVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D S ENPV+YVQYA+AR ++ R A ++ + Sbjct: 399 YSLIRSSVDTPIDIDLALWSSASNENPVYYVQYAHARLSALARNAAELG-------LIPD 451 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 E E L+ L E+PRV++ A +EP+++ YL DLA +H + R P Sbjct: 452 TAHLELLSHDKEGTLLRTLGEFPRVLKTAASLREPHRVCRYLEDLAGDYHRFYDSCRVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L RL L A +I +GL I+GV +P M Sbjct: 512 QG---DEQPTDLHTARLALCQATRQVIANGLAILGVTAPERM 550 >gi|153005149|ref|YP_001379474.1| arginyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5] gi|166232753|sp|A7HCP4|SYR_ANADF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|152028722|gb|ABS26490.1| arginyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5] Length = 605 Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 228/603 (37%), Positives = 342/603 (56%), Gaps = 35/603 (5%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILD---RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 R+ ++ K E + +E PRD HG + NAAM+L++ G P Sbjct: 2 VKDRVIELFRQALAKGAAEGRWPALEASFSVEAPRDPKHGDFAVNAAMVLAKAAGKPPRD 61 Query: 64 IAELIVARIKIDPDVDSV---FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 +A+ I A ++ + +AG GFIN+ L+P + L +V G YGR +G+G Sbjct: 62 LAQAIAAEVRAVDAQHEIAGLEVAGPGFINVRLAPDVWLRALGRVVAEGTAYGRTEVGRG 121 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KV +E+VSANPTGPMHVGH R AVVGD + SL+ ++G+EVTREYY+ND GAQ+ TLA S Sbjct: 122 KKVIVEYVSANPTGPMHVGHGRNAVVGDGVQSLLRWAGFEVTREYYVNDYGAQVQTLARS 181 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V RYQ+ L+ +P YPG Y+K V L ++ L+ PE +WL + +D +V+ Sbjct: 182 VHLRYQE-LFGRQVTMPPKSYPGEYVKDVAAALKAEHGDRWLDAPEAEWLALFRDRAVEH 240 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK--- 297 ++ +IR+DL+A+NI+ D + SE + + + + LA + VY G LPPPKSK Sbjct: 241 VLGLIREDLRAVNIEFDRWYSEKALY--ESGTVDRFLRFLAEKDLVYVGKLPPPKSKKGQ 298 Query: 298 --------------TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343 + LFRS+ GD+VDRP+ K+DG+ TYF AD+AY Sbjct: 299 PAPAQAASNSAHDLGEEGIAASDDLTLFRSSQYGDEVDRPVKKADGTTTYFCADIAYHWD 358 Query: 344 KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403 K +R D ++ V+G+DH GYV RLEA A+ + ++V+L ++V L R G +KMSKR Sbjct: 359 KRQR-ADALVDVLGADHGGYVPRLEAALEALGASRKDLHVVLIQMVNLTRGGEAVKMSKR 417 Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463 AG ++LR VVDEVG D+ RF+ L R++ LDFD K Q+ +NPVFYVQY +AR Sbjct: 418 AGTVVSLREVVDEVGRDATRFIFLTRRSDAQLDFDIELAKRQTLDNPVFYVQYGHARLAQ 477 Query: 464 IFRQAKDIFPDL-DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 IF +A++ + +FDL + E LI + +P ++ A +A EP+++A Sbjct: 478 IFAKAREAGAPVPEFDLEAARTLT-----SAEEQDLIRRIVAFPDMLAAAALAYEPHRVA 532 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 FYL + + FH +++ G+ V + + + T RL L A+ ++ +GL ++GV +P Sbjct: 533 FYLQETIAAFHSYYTQGKRTGER--VISADARKTAGRLFLCRALKQVLANGLGLLGVAAP 590 Query: 583 NEM 585 M Sbjct: 591 ERM 593 >gi|119474652|ref|ZP_01615005.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2143] gi|119450855|gb|EAW32088.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2143] Length = 580 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 199/605 (32%), Positives = 304/605 (50%), Gaps = 55/605 (9%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 ++ L ++ + + I RI ++R RD +HG L++N AM L++ P IA+ Sbjct: 5 IEQLIRAALTDLINDGSLPEGIEPRISVDRTRDKSHGDLASNIAMTLAKAAKKPPKDIAQ 64 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 LI+ + V IAG GFIN YL+ + ++ I+ G YGR GKG KV +E Sbjct: 65 LIINALPASTQVSKAEIAGPGFINFYLNEAAAAAVVIDILSQGKNYGRCNDGKGKKVQVE 124 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+HVGH R A VGD++ L+ +G++VT E+Y NDAG QI+ LA SV R Sbjct: 125 FVSANPTGPLHVGHGRGAAVGDSICRLLDAAGWDVTAEFYYNDAGQQISNLAGSVQARC- 183 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGK-----ELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 + L D PE Y G Y+ V E D ++ + L + D++V + Sbjct: 184 KGLGPGDESWPEDGYQGSYINDVANSYMAKEKIDAEDKHVVGAGDADNLEAISDFAVAYL 243 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 + DLKA + D++ E + + + D + L G+ YE Sbjct: 244 RREQDLDLKAFGVDFDVYYLESSLY--NEGKVADTVQQLINSGHTYE------------- 288 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKS---------------DGSYTYFAADLAYFKCKYE 346 L ++T GDD DR + KS +G YTYF D+AY K++ Sbjct: 289 ---KEGALWLKTTDFGDDKDRVMRKSGVVETDPVSGNETRKEGGYTYFVPDVAYHLNKWQ 345 Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVS------EKKAQINVLLCELVRLYRDGMPIKM 400 RGF+ ++ G+DH + R+ A AVS + +L ++V + R G +K+ Sbjct: 346 RGFERVVNEQGADHHSTITRVRAGIQAVSQHNHLNIPQQWPEYVLHQMVMVMRGGEEVKI 405 Query: 401 SKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460 SKRAG +IT+R +VDEVG D+ R+ + R + L FD QS +NPV+Y+QYA+AR Sbjct: 406 SKRAGSYITIRDLVDEVGKDATRYFLAARAANSQLTFDIDLAISQSNDNPVYYIQYAHAR 465 Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520 S+ R+ D L N E + +E L+ L+ YP +I+NA I EP+ Sbjct: 466 VCSMMRKLSDHQWSWSAKL---NSNTLEHLVEDAEKALMKKLSGYPELIKNAAIHSEPHT 522 Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 +A YL +LA +H +++ + ++ L RL L +V +I +GL+++GV Sbjct: 523 VANYLRELAGDYHSYYNAHKT-------LVDDDDLRNARLSLSESVRQVIENGLSLLGVS 575 Query: 581 SPNEM 585 +P EM Sbjct: 576 APAEM 580 >gi|227547994|ref|ZP_03978043.1| arginyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291] gi|227079900|gb|EEI17863.1| arginyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM 44291] Length = 550 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 190/582 (32%), Positives = 297/582 (51%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD ++ ++ + ++ ++ + +ERPR+ HG +TN A+ +++ G +P Sbjct: 4 ADLATAIRQATTTVLTDHDLDATVVPETVTVERPRNPEHGDYATNIALQVAKRAGTNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A +V + DP + S +AG GFINL L+ K+++ I+ +G YGR+ I G KV Sbjct: 64 LAGWLVDALASDPAIASADVAGPGFINLRLAADAQGKLVADILEAGQNYGRSDIYAGEKV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++ +G EVTREYY ND G QI+ A S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEAAGAEVTREYYFNDHGGQIDRFARSLVA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + P+ Y G Y+ + + DK+ L + + + V M Sbjct: 184 AAK------GEPTPQDGYGGAYISEIAAGVVDKH-EGALEGTDAEVQETFRAAGVDMMFA 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L ++ D++ E+ + + + L G +YE Sbjct: 237 HIKRSLADFGVEFDVYFHENSLF--ESGAVDKAVATLKDNGNLYES-------------- 280 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 RST GDD DR ++KSDG Y A D+AY K++RG IY++G+DH GY Sbjct: 281 --DGAWWLRSTDFGDDKDRVVIKSDGDAAYIAGDIAYVADKFDRGHTLAIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL A A A+ + VL+ ++V L R+G P+KMSKRAG ITL +VD +G D R Sbjct: 339 IARLRAAAQALGYDADAVEVLIGQMVNLVRNGKPVKMSKRAGTIITLEDLVDAIGVDGAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + + + LD D QS +NPV+YVQY +AR SI R+A + + F Sbjct: 399 YSLARSSVDQTLDIDLDLWTRQSSDNPVYYVQYGHARLCSIARRASEAG--VSFADPDLG 456 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ E E D LI L EYP V++ A +EP+++A Y+ +LAS FH + + P Sbjct: 457 LLAHEKEGD-----LIRTLGEYPAVVKAAAELREPHRVARYVEELASSFHKFYDACQILP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + RL L A ++ + L+++GV +P M Sbjct: 512 K---AGEDAEPIHEARLALAMATRQVLANALDLLGVSAPERM 550 >gi|312139159|ref|YP_004006495.1| arginyl-tRNA ligase args [Rhodococcus equi 103S] gi|311888498|emb|CBH47810.1| arginyl-tRNA ligase ArgS [Rhodococcus equi 103S] Length = 550 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 190/582 (32%), Positives = 300/582 (51%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + L+ ++ + ++ +L + +ERPR+ HG ++N AM +++ G +P Sbjct: 4 ADLAELLRGTAAKVLAEHGLDVSVLPATLTVERPRNPEHGDYASNVAMQVAKKAGANPRD 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + A + +DS +AG GF+N+ L+ I++ + SG YG G ++ Sbjct: 64 LATWLAAALAASDGIDSAEVAGPGFLNIRLAADAQGAIVAKALESGAAYGAGDALAGKRI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L ++A G +VTREYY ND GAQI+ S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRILATQGGDVTREYYFNDHGAQIDRFTRSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 Q PE Y G Y+ + ++ K L+ PE + + V+ M + Sbjct: 184 AAQ------GEPAPEDGYAGAYIVDIAADV-QKQVPGALDLPEAERHETFRSIGVELMFE 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L + D++ E+ + + ++ L G +Y Sbjct: 237 HIKRTLHEFGVDFDVYFHENSLF--ESGAVERAVETLKGSGNLYH--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 + +ST GDD DR ++KSDG+ Y A D+AYF+ K RGFD IY++G+DH GY Sbjct: 280 -EDGAWWLKSTDFGDDKDRVVIKSDGNAAYIAGDIAYFQDKRARGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA + + V++ ++V L R G+ +KMSKRAG ITL +V+ +G D+ R Sbjct: 339 IGRLKAAAAAFGDDPDTVEVMIGQMVNLVRGGVAVKMSKRAGTVITLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ + +D D + ENPV+YVQYA+AR SI R A D+ L + Sbjct: 399 YSLVRSSVDQSIDIDLELWASTTNENPVYYVQYAHARLCSIARNAADLG--LGTENPNLG 456 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ + E D LI +AEYPRV+ A +EP+++A YL +LA +H + R P Sbjct: 457 LLTHDREGD-----LIRTIAEYPRVVAKAAELREPHRIARYLEELAGTYHRFYDACRILP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + LT RL L A ++ +GL ++GV +P M Sbjct: 512 QG---DEEATGLTTARLALCAASRQVLANGLELLGVSAPERM 550 >gi|218782325|ref|YP_002433643.1| arginyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01] gi|226701483|sp|B8FCL2|SYR_DESAA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|218763709|gb|ACL06175.1| Arginyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01] Length = 556 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 220/580 (37%), Positives = 324/580 (55%), Gaps = 29/580 (5%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + + + + + + + +E P+ AHG STN AM++++ + P IAE Sbjct: 5 LAEMITRAAFKAHEQGVLPSDAIPQPGLEEPKQEAHGDFSTNIAMVMAKVQKMAPRKIAE 64 Query: 67 LIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 IV ++ + IAG GFIN YL PS ++++ I+ G EYGR+ IG G KV + Sbjct: 65 AIVDNLEDPENFLVKTEIAGPGFINFYLRPSLWQRVVKGILDKGDEYGRSQIGAGQKVQV 124 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+HVGH R A VGD LA+L+ G+EV REYYIND+G QI TL LS + RY Sbjct: 125 EFVSANPTGPLHVGHGRGAAVGDALAALLDMCGFEVEREYYINDSGRQIRTLGLSTWLRY 184 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245 + L + D P+ Y G Y+K + K + D+ ++L + EE + ++ ++ I Sbjct: 185 CE-LKGKEIDFPKDCYQGDYIKDLAKRIQDENLADLDSMEEEDAVLWCARFAANDILDGI 243 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 + DLK + HD++ SE + D + +++ +++ + G +YE Sbjct: 244 KQDLKDFRVVHDVWFSEQSLY--DDNSVQNALEHFEKTGDIYE----------------K 285 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365 F++ GD+ DR +++++G TYFA+D+AY K K++RGFD +I V G+DH GYV Sbjct: 286 DGAKWFKTEDRGDEKDRVVVRNNGLTTYFASDIAYHKNKFDRGFDRVIDVWGADHHGYVA 345 Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425 R++A AV K V+L +LV L RDG P+ M+ R G F TL VV+EVG+D+ RF+ Sbjct: 346 RMKAAVDAVGRDKDAFEVVLVKLVNLLRDGEPLAMTTRGGTFETLADVVNEVGADAARFI 405 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 L R LDFD K+Q+ ENPV+YVQY +AR SI +AKD LDFD I Sbjct: 406 FLSRHYESPLDFDLELAKKQTNENPVWYVQYVHARICSIEAKAKDFPVSLDFDWDRDEEI 465 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 +E E ++L+ LA YP V+E A EP+++ FYL +LAS FH + Sbjct: 466 LKEIEE----IRLMKALARYPEVVEGAARTLEPHRIVFYLRELASAFHSFYHDHMVLK-- 519 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + LT RL LV V +I +GL ++GV +P M Sbjct: 520 ---EDQTPVLTKARLDLVTTVRQVIRNGLALLGVSAPESM 556 >gi|254521562|ref|ZP_05133617.1| arginyl-tRNA synthetase [Stenotrophomonas sp. SKA14] gi|219719153|gb|EED37678.1| arginyl-tRNA synthetase [Stenotrophomonas sp. SKA14] Length = 562 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 188/587 (32%), Positives = 304/587 (51%), Gaps = 37/587 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 + + ++ + + L V+ERP+ HG +TNAAM+L++ +P +A Sbjct: 5 LRALISQGIEALRANGTLPADSLPPDFVVERPKTRDHGDFATNAAMLLAKAARSNPRALA 64 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 + +V + DV V IAG GFIN +L+P+ ++ +S++ G +YGRNL G G V + Sbjct: 65 QALVEALPRSEDVSKVEIAGPGFINFHLAPAAYQREAASVIKEGHDYGRNLSGNGRTVGV 124 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 E+VSANPTGP+HVGH R A +GD +A ++ +G+ RE+Y NDAG QI LALS R Sbjct: 125 EYVSANPTGPLHVGHGRAAAIGDCVARVLDANGWNAKREFYYNDAGVQIENLALSTQARI 184 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDYSVQA 240 + + D PEG Y G Y+ V + D S ++ + + ++ ++V Sbjct: 185 KGIAPDQDG-WPEGGYRGEYIADVARAYMAGASVDLEGSTVVGAKDPDDMQAIRRFAVAY 243 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 + DL A + DI+ E + + + + L G+ YE Sbjct: 244 LRNEQNLDLAAFGVDFDIYFLESSLYA--DGKVAEAVAKLQASGHTYE------------ 289 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + L RST GDD DR + KSDG++TYF D+AY K++RG++ I +G+DH Sbjct: 290 ----EGGALWLRSTDFGDDKDRVMRKSDGTFTYFVPDVAYHLSKWQRGYERAITELGADH 345 Query: 361 SGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 G + R+ A A+ + +L ++V + R G +K+SKRAG + TLR +++E G Sbjct: 346 HGSLARVRAGLQAMEVGIPQGWPEYVLHQMVTVMRGGEEVKLSKRAGSYFTLRDLIEEAG 405 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ ++ RK L FD ++QS +NPVFYVQYA+AR S+ RQA++ + Sbjct: 406 RDATRWFLIARKPDSQLTFDIDLARQQSNDNPVFYVQYAHARVCSLLRQAQEKGLVYEQ- 464 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + D + L L+ ++ YP V+E A ++ EP+ +A YL +LA FH + Sbjct: 465 --ANGLANLGRLADDASLLLMNEISRYPEVVEAAGVSMEPHLVAQYLRELAHAFHTWYHG 522 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V ++ +L L A ++ +GL+++GV +P +M Sbjct: 523 T-------PVLVDDAADRNAKLTLACAARQVLANGLDLLGVSAPEKM 562 >gi|288917938|ref|ZP_06412298.1| arginyl-tRNA synthetase [Frankia sp. EUN1f] gi|288350727|gb|EFC84944.1| arginyl-tRNA synthetase [Frankia sp. EUN1f] Length = 567 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 200/591 (33%), Positives = 308/591 (52%), Gaps = 37/591 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 A+ + + +++ +++ + + IERPR HG ++ AM L++ P + Sbjct: 4 AELADSIVAAVRDAVAGGELDVPVPTTVTIERPRQPEHGDYASPVAMQLAKAARRPPRQV 63 Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 AEL+ AR++ P V V +AG GF+N+ L+ + L I ++V G YGR +G +VN Sbjct: 64 AELLAARLRTSPGVAEVEVAGPGFLNIRLAGAALGGIAQAVVRGGAAYGRATTPRGLRVN 123 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGP+ + R A VGD LA ++A +GYEV EYY+NDAG Q+ S+ Sbjct: 124 LEFVSANPTGPVTLASTRWASVGDALARVLAAAGYEVGTEYYVNDAGVQVERFGASILA- 182 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADK--------YSSELLNFPEEKWLPIVKDY 236 AL + PE Y G Y+ + + + +EK L + Sbjct: 183 ---ALRGEPA--PENGYHGAYVAEIAARVVAANPGLEQLVAAGSGGQVADEKALAVCARD 237 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 V+ M+ IR L ++ D++ SE H + + I+ L +G+V++ Sbjct: 238 GVEMMLAEIRSTLAGFGVEFDLWKSERSLH--EAGELTAAIEELRAKGHVFDA------- 288 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + R+T GDD DR L+KSDG TYF AD AY++ K RGFD + Y++ Sbjct: 289 ---------DGAVWLRTTDFGDDKDRALVKSDGHPTYFCADAAYYRDKRRRGFDRLCYLL 339 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 G+DH GY+ RL A+AA + Q ++V++ +LV L R G+ +KMSKRAG F+TL +VD Sbjct: 340 GADHHGYIGRLRAIAACFGDDPEQTLDVIIGQLVTLSRGGVAVKMSKRAGTFLTLHDLVD 399 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 VG D+ R+ ++ LD D + Q+ +NPVFYVQYA+AR S+ R A + Sbjct: 400 AVGVDAARYSLVRASMDSSLDLDLDVIARQTNDNPVFYVQYAHARISSLIRNAAALGLAT 459 Query: 476 DFD-LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 D F + E++L+ L E PRVIE+A + P+++A YL +LA +H Sbjct: 460 SADPAFDVEAVDVSLLTHQREVELLGALGELPRVIESAAALRAPHRIARYLEELAGTYHR 519 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R P+ LT RL LV A ++ +GL+++GV +P M Sbjct: 520 FYDSCRVLPQG---DEEATVLTAARLLLVEATRVVLANGLHLLGVGAPERM 567 >gi|198282489|ref|YP_002218810.1| arginyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665719|ref|YP_002424679.1| arginyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270] gi|226701628|sp|B7J3R6|SYR_ACIF2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|238689961|sp|B5EL87|SYR_ACIF5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|198247010|gb|ACH82603.1| arginyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517932|gb|ACK78518.1| arginyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 579 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 198/609 (32%), Positives = 317/609 (52%), Gaps = 56/609 (9%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + A S L+ L+++ + ++ I + ++RP+ HGHL++N A++L++ +G P Sbjct: 1 MKAFVSQALQGALQQLHAQGRIP-GIPATLELDRPKQVEHGHLASNVALLLAKAVGRKPR 59 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 IA+ IVA + + IAG GFIN +L P+ ++ + +G N G G + Sbjct: 60 DIADDIVAALPASDWIARTEIAGPGFINFFLQPAAFHAVIHRVRTEKEHFGANRNGAGQR 119 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 + +EFVSANPTGP+HVGH R A G +LA+++ F+G+++ EYY+NDAG Q++ LA SV+ Sbjct: 120 LQMEFVSANPTGPLHVGHGRGAAYGASLANILRFNGFDIFCEYYVNDAGRQMDILAASVY 179 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL--------------------- 221 RY +A PE Y G Y++ + L ++ L Sbjct: 180 LRYLEADKALPWPFPENGYRGDYVREIAAHLREQVGDRLRHAAVGLPNLPQMSDGDIAID 239 Query: 222 -----LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276 L + + + ++ IRDDL+ + ++ + SE D + Sbjct: 240 TLIAHLKQSLGEDYRTLHSAGLDEILADIRDDLEGFGVHYERWYSEGSL--MDTGAVDSA 297 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336 + L + G+ Y L FR+T DD DR L + +G+YTYFA+ Sbjct: 298 VAALEKAGHCY----------------TQEGALWFRATAFDDDKDRVLRRDNGAYTYFAS 341 Query: 337 DLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396 D+AY K+ RGF ++I + G+DH GYV R++A A+ Q+ V+L + LYR Sbjct: 342 DVAYHAEKFARGFTHVIDMWGADHHGYVPRVKAALRALGLDDQQLEVVLVQFAILYRGTE 401 Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456 I MS RAG+F+TLR + +EVG+D+ RF + R+ + LDFD K+ S+ENPVFY+QY Sbjct: 402 KISMSTRAGEFVTLRELREEVGNDAARFFYVLRRADQHLDFDLELAKKHSEENPVFYIQY 461 Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 A+AR S+ RQ+ + L P + + E ++ E+ L L +P V+ A + Sbjct: 462 AHARVYSLLRQSVEKG----LSLPPADGVGLEILQESREIALADALWRFPEVVATAARDR 517 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 EP+++AFYL +LA+ FH +++ R + L RL L AVA I +GL + Sbjct: 518 EPHQIAFYLRELAAAFHTYYNSTR-------ILVEETPLRHARLTLCLAVAQSIANGLRL 570 Query: 577 IGVESPNEM 585 +GV +P +M Sbjct: 571 LGVSAPEQM 579 >gi|293374939|ref|ZP_06621235.1| arginine--tRNA ligase [Turicibacter sanguinis PC909] gi|292646416|gb|EFF64430.1| arginine--tRNA ligase [Turicibacter sanguinis PC909] Length = 553 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 194/581 (33%), Positives = 328/581 (56%), Gaps = 36/581 (6%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 + + +K + + C E L+ +++E +D +HG STN AM L++ +P IA Sbjct: 8 NLKAEIKQAV--LTCGYITESDDLN-VILENSKDVSHGDYSTNIAMQLTKIAKKNPRMIA 64 Query: 66 ELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 E I+ +V+ + IAG GFIN ++ S + + +I+ G E+G + G G K N Sbjct: 65 EEILNNFNAESANVEKIEIAGPGFINFFMKKSAFTQSIKNIIELGHEFGTSKSGNGLKYN 124 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +E+VSANPTG +H+GH R A +GD+L ++ +GY+VTREYY+NDAG QI+ L +S + R Sbjct: 125 VEYVSANPTGDLHLGHARGAALGDSLCRILTKAGYDVTREYYVNDAGNQIHNLVISAYAR 184 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 Y QAL ++++PE Y G + +G+ + ++Y +L+N +E + ++++ S++ + Sbjct: 185 YLQAL-GLEAEMPEDGYHGPDIIALGQSMVEQYGDKLVNKLDENY-KLIREMSLEYELNK 242 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 IR DL ++ D++ SE + + D + +++ I L +G++YE Sbjct: 243 IRKDLDMFGVEFDMYTSEQELY--DNNLVQESIKLLEEKGFIYE---------------- 284 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 + + FRST GDD DR L KSDGSYTY D+A K +RG D ++ + G+DH GY+ Sbjct: 285 EDGAVWFRSTDFGDDKDRVLKKSDGSYTYLTPDIANHIEKLKRGNDKLVDIWGADHHGYI 344 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 R++A A+ + ++ V + ++VRL +DG KMSKR G +T+R +VDEVG D+VR+ Sbjct: 345 ARVKASMQALGYEADKLEVDIIQMVRLIKDGEEFKMSKRTGKAVTIRELVDEVGVDAVRY 404 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 + R +DFD ++S ENPV+Y QYA+AR SI RQA++ +++ ++ Sbjct: 405 FFVMRSGETQMDFDLDLATKKSNENPVYYAQYAHARTCSILRQAEEKGFNVELKDQYNHI 464 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 E ++I + ++P V+ +A + P+ + Y+ DLA+ FH ++ Sbjct: 465 ------THEKEFEVIKLMGDFPIVVGDAANKRRPHLICNYINDLATAFHSLYNAE----- 513 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + N + T +L L+ A+ I + L +IGV +P M Sbjct: 514 -KVINEENVEKTNEKLALIKALEITIKNALELIGVSAPERM 553 >gi|291612598|ref|YP_003522755.1| arginyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1] gi|291582710|gb|ADE10368.1| arginyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1] Length = 558 Score = 555 bits (1430), Expect = e-155, Method: Composition-based stats. Identities = 192/592 (32%), Positives = 305/592 (51%), Gaps = 41/592 (6%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +F S L + ++ ++IERP+ +HG + N AM L++PL Sbjct: 1 MSAVLNFKSHLSELFAQALREVA-PDHSGATVLIERPKQASHGDYACNLAMQLAKPLRKS 59 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P IA ++A + ++ V IAG GFIN++++ + + ++ ++ +G YG +G G Sbjct: 60 PRDIANALIAALPKSDVIEKVEIAGAGFINVFITTAAKQDVVHGVLQAGAGYGHVHVGGG 119 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KV +EFVSANPTGP+HVGH R A VGD L +++ +G+ VTRE+Y NDAG QI+ L LS Sbjct: 120 RKVGVEFVSANPTGPLHVGHGRGAAVGDCLCNVLHAAGWNVTREFYYNDAGVQIDNLTLS 179 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHV-----GKELADKYSSELLNFPEEKWLPIVKD 235 V R + + +D PE Y G Y+ V KE + + + ++ Sbjct: 180 VQLRC-KGITPDDPSWPESGYRGDYIVDVAKSYMAKETVEADDQHITGKGDVNDAEAIRH 238 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 ++V + + DL+A ++ D+F E + + + + L G+ YE Sbjct: 239 FAVAYLRREQDLDLRAFEVEFDVFSLESALYT--DGKVEETVQKLIASGHTYE------- 289 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 L R+T GDD DR + KSDG YTYF D+AY K+ RGF+ +I Sbjct: 290 ---------QDDALWLRTTDFGDDKDRVMRKSDGGYTYFVPDVAYHLDKWRRGFERVINE 340 Query: 356 MGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 GSDH + R+ A A+ K + +L ++V + ++G +K+SKRAG ++TLR + Sbjct: 341 QGSDHHSTITRVRAGLQALDAGIPKGWPDYVLHQMVTVLKNGEEVKISKRAGSYVTLRDL 400 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 +DEVG D+ R+ + R L FD K QS +NPV+Y+QYA+AR ++ Q Sbjct: 401 IDEVGCDATRYFLAARHPDSQLVFDIDLAKSQSNDNPVYYIQYAHARISTVLAQW----- 455 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 + D E QL+ + ++P+VIE A P+ +AFYL +LA+ FH Sbjct: 456 --NGDRLALLHADVGVLDSEYETQLLQRMIDFPQVIETAAEDLAPHLVAFYLKELAADFH 513 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++ R + KL + RL L+ AVA ++ +GL ++GV +P +M Sbjct: 514 SYYNASRF-------LVEDEKLKLARLALIAAVAQVLKNGLALLGVSAPEKM 558 >gi|29655291|ref|NP_820983.1| arginyl-tRNA synthetase [Coxiella burnetii RSA 493] gi|39932160|sp|Q83A98|SYR_COXBU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|29542563|gb|AAO91497.1| arginyl-tRNA synthetase [Coxiella burnetii RSA 493] Length = 592 Score = 554 bits (1429), Expect = e-155, Method: Composition-based stats. Identities = 209/615 (33%), Positives = 324/615 (52%), Gaps = 61/615 (9%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + L ++ + K ++ ++ I I D HG +TN A+ LS+ G+ P Sbjct: 7 MKQQIETLLNQAIERLKTKGVLKPEVTPVIKITHTTDPQHGDFATNLALTLSKAAGMSPH 66 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +AE IV + + V IAG GFIN +++ + ++SSI+ +G +YGR+ +GKG + Sbjct: 67 ALAEKIVEALPPSGQITEVEIAGPGFINFFVTEGSYQTVVSSILKAGKDYGRSEMGKGQR 126 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V++E+VSANPTGP+HVGH R A G +A+L+ +G+EV REYY+NDAG Q+ LALSV+ Sbjct: 127 VHMEYVSANPTGPLHVGHGRGAAYGACVANLLNAAGFEVHREYYVNDAGRQMGILALSVW 186 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL----------------NFPE 226 RY Q Y +LP+ Y G Y+ + + L KY + N Sbjct: 187 VRYLQG-YEASIELPKNAYQGEYIIDIAEALKAKYGKQFYHSVESIQAKIPEEIDSNADP 245 Query: 227 EKWLPIV----------KDY------SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 E +L + KD+ ++ +++ I++DL+ + +D + E R Sbjct: 246 EAYLDVWVTAQKDLLGPKDFECVFQAALDSILNDIKNDLEEFGVTYDDWFPESRLVR--E 303 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I++ +D L + GYVYE FR+T +GD+ DR L++ +G Sbjct: 304 GLIQEGLDLLTKHGYVYE----------------KNGAQWFRATALGDEKDRVLIRKNGL 347 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFAAD+AY K+ +G+D +I + G+DH GY+ R+ + + ++++LL + Sbjct: 348 PTYFAADVAYHLHKFNQGYDQIIDIFGADHHGYIPRIRGFLKGLGKAPEKLHILLVQFAI 407 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 LYR + MS R G F+TLR + EVG+D+ RF + RK + LDFD K QS ENP Sbjct: 408 LYRGNEKVSMSTRGGTFVTLRELRHEVGNDAARFFYIMRKPDQHLDFDLELAKSQSNENP 467 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+Y+QYA+AR S+FRQ K + D PR + E +L+ L YP VI+ Sbjct: 468 VYYIQYAHARICSVFRQLKTTQKNWDR---PRGMENLSLLSTNYEKELLATLGRYPEVIK 524 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A + P+ LA YL LA+ FH +++ R + L RL L++AV II Sbjct: 525 RAAMNYAPHLLAHYLQTLANQFHTYYNAERF-------LIEDDNLRNARLNLINAVQQII 577 Query: 571 NSGLNIIGVESPNEM 585 +GL ++GV +P EM Sbjct: 578 RNGLTLLGVSAPEEM 592 >gi|82703571|ref|YP_413137.1| arginyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196] gi|82411636|gb|ABB75745.1| arginyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196] Length = 598 Score = 554 bits (1429), Expect = e-155, Method: Composition-based stats. Identities = 203/608 (33%), Positives = 312/608 (51%), Gaps = 62/608 (10%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 DF S + L+ + + LD I RPR +HG S N AM L++PL P IA Sbjct: 25 DFKSHFTDILRNALNERGLADLNLD-IEFARPRQSSHGDYSCNLAMQLAKPLRQKPRDIA 83 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 + + P ++ V IAG GFINL+L+ S ++ ++ SG ++G + +G G K+ + Sbjct: 84 QSLATAFSASPYLEKVEIAGAGFINLFLTTSAKQQFSRYVLESGEKFGHSSMGAGEKIQV 143 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+HVGH R A G +LA+++A +GY VTREYYINDAG Q++ LALS + RY Sbjct: 144 EFVSANPTGPLHVGHGRGAAFGASLANVLAAAGYSVTREYYINDAGRQMDILALSTWLRY 203 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE-------------EKWLP- 231 + L S P Y G Y++ + + + ++ ++ PE E L Sbjct: 204 LE-LNGVASAFPPNAYQGEYVRDMARLIHKAHAGRYVHEPELLFDRVAGAEADTEAALDG 262 Query: 232 --------------IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277 + ++ + + R+DL + DI+ SE D + + Sbjct: 263 LIANAKKLLGQDYAYIHNFVLNEQLGDCRNDLMEFGVTFDIWFSEQSLF--DSGGVAQAV 320 Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337 L Y+Y+ FRS+ GD+ DR + + +G +TYFA+D Sbjct: 321 HLLEEGNYLYQ----------------QDGAKWFRSSHFGDEKDRVVQRENGQFTYFASD 364 Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397 +AY K+ RGFD +I + G+DH GY+ R++ A++ ++ + L + LYRDG Sbjct: 365 IAYHLNKFSRGFDRVIDIWGADHHGYISRVKGAMQALALDPEKLEIALVQFAVLYRDGKK 424 Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457 + MS RAG+F+TLR + EVG+D+ RF + RK+ + LDFD K QS +NPV+YVQYA Sbjct: 425 VPMSTRAGEFVTLRELRQEVGTDAARFFYVLRKSDQHLDFDLDLAKSQSTDNPVYYVQYA 484 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 +AR S+ Q + D + +EL L+ L +YP +E A Sbjct: 485 HARVCSVLEQWGE-------DPGMLVTADTSALTGAAELSLLQKLIDYPETVEAAAREFS 537 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 P+ +AFYL +LA FH +++ R + + RL LV AV ++N+GL ++ Sbjct: 538 PHLIAFYLKELAGEFHSYYNSTRF-------LVPEMTVRLARLALVAAVRQVLNNGLKLL 590 Query: 578 GVESPNEM 585 GV +P +M Sbjct: 591 GVSAPAKM 598 >gi|218460770|ref|ZP_03500861.1| arginyl-tRNA synthetase [Rhizobium etli Kim 5] Length = 464 Score = 554 bits (1428), Expect = e-155, Method: Composition-based stats. Identities = 286/465 (61%), Positives = 357/465 (76%), Gaps = 2/465 (0%) Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KVN+E+VSANPTGPMHVGHCR AVVGD LA+L+AF+GY V +EYYINDAG+QI+ LA S Sbjct: 1 RKVNVEYVSANPTGPMHVGHCRGAVVGDALANLLAFAGYGVEKEYYINDAGSQIDVLARS 60 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 VF RY++AL ++P G YPG YL VG+ LA Y L N PE +W+PIVKD ++ A Sbjct: 61 VFLRYREALGERIGEIPSGLYPGDYLVPVGQSLAADYGVRLHNMPEVQWMPIVKDRTISA 120 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM +IR+DL ALN+ HDIF SE H + IR I++L +GYVY+G LPPPK + + Sbjct: 121 MMVMIREDLAALNVHHDIFFSERTLHANGAAAIRTAINDLTFKGYVYKGTLPPPKGQLPE 180 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + DR+Q LFRST VGDD+DRPL+KSDGSYTYFAAD+AYFK K++RGFD MIYV+G+DH Sbjct: 181 DWE-DREQTLFRSTEVGDDMDRPLIKSDGSYTYFAADVAYFKNKFDRGFDEMIYVLGADH 239 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GYVKRLEAVA VS+ KA++ VLLC+LV+LYR+G P+KMSKR+GDF+TLR VV+EVG D Sbjct: 240 GGYVKRLEAVARGVSDGKAKLTVLLCQLVKLYRNGEPVKMSKRSGDFVTLRDVVEEVGRD 299 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 SVRFMML+RKNSE LDFDF KV EQSK+NPVFYVQYA+ARC S+FRQA++ FP LD Sbjct: 300 SVRFMMLYRKNSEPLDFDFAKVTEQSKDNPVFYVQYAHARCMSVFRQAREAFPGLDVSSE 359 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 D +ELQL+ LAE+PRV+E A +QEP+++AFYLYDLAS FH HW+ G+ Sbjct: 360 DL-AKAVAGIGDPAELQLVAKLAEFPRVVEAAAQSQEPHRIAFYLYDLASSFHAHWNKGK 418 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + LRFV NR+ ++ RL LV+AVAS++ SGL I G +P+EM Sbjct: 419 DQTELRFVNDKNRESSIARLGLVYAVASVLKSGLAITGTAAPDEM 463 >gi|117927836|ref|YP_872387.1| arginyl-tRNA synthetase [Acidothermus cellulolyticus 11B] gi|117648299|gb|ABK52401.1| arginyl-tRNA synthetase [Acidothermus cellulolyticus 11B] Length = 562 Score = 554 bits (1427), Expect = e-155, Method: Composition-based stats. Identities = 194/582 (33%), Positives = 309/582 (53%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 AD + ++ ++ ++ + +++ERP+ G +TN A+ L++ G P + Sbjct: 16 ADLADAIRRAIRAAVDADQLRVDVPAEVLVERPKRKEFGDYATNVALQLAKSAGRPPRDV 75 Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 A ++ ++ P + +V +AG GF+N+ L+ I IV +G YG + +G ++N Sbjct: 76 AAILAEQLAAQPGIAAVDVAGPGFLNIRLAAGAQGDIARQIVEAGPRYGTSTTLRGQRIN 135 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGP+H+GH R A VGD LA ++ +G EVTRE+YIND GAQ+ S+ Sbjct: 136 VEFVSANPTGPLHLGHTRWAAVGDALARVLQAAGAEVTREFYINDRGAQMEKFGASL--- 192 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 A +P+ Y G Y+ + KE+A ++ E L+ P ++ +D + ++ Sbjct: 193 ---AAAAVGEPIPDDGYHGRYIHDLAKEIAGEH-PEFLDLPPDERAAAFRDEGYRRQLER 248 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 R L+ + D++ SE H + + +D L RQG+VYE Sbjct: 249 QRRALEHFRVHFDVWFSERVLH--ESGAVEAALDELRRQGHVYEA--------------- 291 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 + R+T GDD DR L++S+G TYFAAD AY+ K RGFD +Y++G+DH GYV Sbjct: 292 -DGAVWLRTTDFGDDRDRVLVRSNGEKTYFAADAAYYLDKRRRGFDTCLYLLGADHHGYV 350 Query: 365 KRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 RL+A+AA + + + VL+ +LV++ + G +++SKRAG+ +TL VVD G D+VR Sbjct: 351 ARLKAIAACAGDDPERTLEVLIGQLVKILKGGEEVRLSKRAGEIVTLEDVVDLAGVDAVR 410 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + + L D + Q+ +NPVFYVQY AR S+ R A+D+ D R Sbjct: 411 YSLARYPADSPLTLDVDLITRQTNDNPVFYVQYVAARTASVSRHARDLGID-------RG 463 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 E+ L+ LAE+PR++ +A +EP+++A YL +LA +H + R P Sbjct: 464 AFDPTLLGHDREIDLLGALAEFPRIVASAAELREPHRIARYLEELAGTYHRFYDACRILP 523 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LT RL L A +I +GL ++GVE+P M Sbjct: 524 ---VGDEQPTPLTHARLWLNDATRIVIANGLELLGVEAPERM 562 >gi|148359603|ref|YP_001250810.1| arginyl tRNA synthetase [Legionella pneumophila str. Corby] gi|296107645|ref|YP_003619346.1| arginyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy] gi|226701418|sp|A5IDL4|SYR_LEGPC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|148281376|gb|ABQ55464.1| arginyl tRNA synthetase [Legionella pneumophila str. Corby] gi|295649547|gb|ADG25394.1| arginyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy] Length = 586 Score = 554 bits (1427), Expect = e-155, Method: Composition-based stats. Identities = 208/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + A LK L + ++ + I +E +D AHG +TN A++L++P P Sbjct: 1 MKAIIEYLLKQALINLQQSGEMPIDLEIEIKVENAKDPAHGDYATNLALVLAKPCRQAPK 60 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +AE +VA I DP V+ + IAG GFIN ++ + I+S I+ G E+GR +G+ K Sbjct: 61 VLAERLVAVIPSDPSVEKIEIAGAGFINFFMRNTARSLIISEILNKGKEFGRGNLGQSQK 120 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V IEFVSANPTGP+HVGH R A G TL +++ +GY+VT EYY+NDAG Q+N LA+SV+ Sbjct: 121 VLIEFVSANPTGPLHVGHGRGAAFGATLGNVLKAAGYDVTLEYYVNDAGRQMNILAVSVW 180 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL--------NFPEEK------ 228 RY + L P Y G Y+ + +E+ + ++ + N P ++ Sbjct: 181 LRYLE-LAGEPIVFPANGYKGQYVYEIAQEMWSEQGNQFVHPWISVVENLPADEPEGGDK 239 Query: 229 ------------------WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 ++++ ++ I+DDL+A ++ D + SE + Sbjct: 240 ETYIDAIIARAQSLLGKDGFANFHQHALKTVLDDIKDDLQAFGVRFDSWFSEQSLF--ED 297 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I I L +G+ YE L FR+T GD+ DR L++++G Sbjct: 298 GSIEKGIQALKDRGHTYE----------------REGALWFRATDFGDEKDRVLVRANGQ 341 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFA+D+AY KY+RGFD +I + G+DH GYV R++ A+ ++ ++V+L + Sbjct: 342 TTYFASDVAYHWNKYDRGFDRVIDIFGADHHGYVTRIKTAVKALGHDESALDVILVQFAI 401 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 LYR G ++MS R+G F+TLR + +EVG+D+ R+ + RK + +DFD K +S +NP Sbjct: 402 LYRGGDRVQMSTRSGSFVTLRELREEVGNDAARYFYVARKPEQHMDFDLDLAKSESSDNP 461 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+Y+QYA+AR S+ RQ K+ D D+ +N+ E + E LI +A YP VI+ Sbjct: 462 VYYIQYAHARICSVLRQLKERGLKWDKDMGLKNLDLLEQQ---HETTLISLIARYPEVIQ 518 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A + EP++LA+YL +LA+ H +++ + + +L RL L+ +V ++ Sbjct: 519 SAAASCEPHQLAYYLRELANGLHSYYNAIQ-------LLCEQEQLRCARLCLLESVRQVL 571 Query: 571 NSGLNIIGVESPNEM 585 N+GL I+GV +P M Sbjct: 572 NNGLAILGVSAPESM 586 >gi|54297958|ref|YP_124327.1| arginyl-tRNA synthetase [Legionella pneumophila str. Paris] gi|81370250|sp|Q5X3M1|SYR_LEGPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|53751743|emb|CAH13165.1| arginine tRNA synthetase [Legionella pneumophila str. Paris] Length = 589 Score = 554 bits (1427), Expect = e-155, Method: Composition-based stats. Identities = 207/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + A LK L + ++ + I +E +D +HG +TN A++L++P P Sbjct: 4 MKAIIEYLLKQALINLQQSGEMPIDLEVEIKVENAKDPSHGDYATNLALVLAKPCRQAPK 63 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +AE +VA I DP V+ + IAG GFIN ++ + I+S I+ G E+GR +G+ K Sbjct: 64 VLAERLVAVIPADPSVEKIEIAGAGFINFFMRSTARSLIISEILNKGKEFGRGNLGQSQK 123 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V IEFVSANPTGP+HVGH R A G TL +++ +GY+VT EYY+NDAG Q+N LA+SV+ Sbjct: 124 VLIEFVSANPTGPLHVGHGRGAAFGATLGNVLKAAGYDVTLEYYVNDAGRQMNILAVSVW 183 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL--------NFPEEK------ 228 RY + L P Y G Y+ + +E+ + ++ + N P ++ Sbjct: 184 LRYLE-LAGEPIVFPTNGYKGQYVYEIAQEMWSEQGNQFVHPWISVVENLPADEPEGGDK 242 Query: 229 ------------------WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 ++++ ++ I+DDL+A ++ D + SE + Sbjct: 243 ETYIDAIIARAQSLLGKDGFANFHQHALKTVLDDIKDDLQAFGVRFDSWFSEQSLF--ED 300 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I I L +G+ YE L FR+T GD+ DR L++++G Sbjct: 301 GSIEKGIQALKDRGHTYE----------------REGALWFRATDFGDEKDRVLVRANGQ 344 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFA+D+AY KY+RGFD +I + G+DH GYV R++ A+ ++ ++V+L + Sbjct: 345 TTYFASDVAYHWNKYDRGFDRVIDIFGADHHGYVTRIKTAVKALGHDESALDVILVQFAI 404 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 LYR G ++MS R+G F+TLR + +EVG+D+ R+ + RK + +DFD K +S +NP Sbjct: 405 LYRGGDRVQMSTRSGSFVTLRELREEVGNDAARYFYVARKPEQHMDFDLDLAKSESSDNP 464 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+Y+QYA+AR S+ RQ K+ D D+ +N+ E + E LI +A YP VI+ Sbjct: 465 VYYIQYAHARICSVLRQLKERGLKWDKDMGLKNLDLLEQQ---HETTLISLIARYPEVIQ 521 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A + EP++LA+YL +LA+ H +++ + + +L RL L+ +V ++ Sbjct: 522 SAAASCEPHQLAYYLRELANGLHSYYNAIQ-------LLCEQEQLRCARLCLLESVRQVL 574 Query: 571 NSGLNIIGVESPNEM 585 N+GL I+GV +P M Sbjct: 575 NNGLAILGVSAPESM 589 >gi|222152067|ref|YP_002561227.1| arginyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402] gi|222121196|dbj|BAH18531.1| arginyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402] Length = 551 Score = 554 bits (1427), Expect = e-155, Method: Composition-based stats. Identities = 196/586 (33%), Positives = 317/586 (54%), Gaps = 36/586 (6%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L +K+ K ++ ++ I IE P+D +G +TN AM+L++ + Sbjct: 1 MNIVQKQKETLIEEIKQAILKAELVTEV-PEIKIENPKDTKNGDYATNIAMVLTKLAKRN 59 Query: 61 PLTIAELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ IV + DV V IAG GFIN Y+ SYL I++ + +++G+ K Sbjct: 60 PREIAQAIVDNLDVQKADVSKVDIAGPGFINFYMDNSYLTGIITEALTKKVDFGKGEP-K 118 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 ++ +E+VSANPTG +H+GH R A VGDTL+++++ +GY+V REYYINDAG QI LA Sbjct: 119 DERILVEYVSANPTGSLHIGHARNAAVGDTLSNVLSAAGYDVLREYYINDAGKQIENLAY 178 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ R+ QAL D LP Y G + +GK+LA+K+ E + E + + + + Sbjct: 179 SIEARFLQAL-GEDKALPADGYHGKDIIEIGKDLAEKH-PEYKDVEEAERIKAFRKLGLD 236 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M+ ++ DL N+ D + SE + + I ++ + ++GY++E Sbjct: 237 YEMEKLKKDLTEFNVHFDNWFSETSLY--ENKKIDKALEQMRQRGYIFE----------- 283 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + R+T GDD DR L+K DGSYTYF D+AY K ERG+D +I + G+D Sbjct: 284 -----EDGATWLRTTEFGDDKDRVLIKKDGSYTYFLPDIAYHYDKIERGYDTLINLFGAD 338 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A ++ + + ++VRL +DG +KMSKR G+ ITLR ++DEVG Sbjct: 339 HHGYINRLKASLETFGVDSKRLEIQVMQMVRLLQDGQEVKMSKRTGNAITLRDIMDEVGI 398 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R DFD K +S +NPV+Y QYA+AR S+ RQAK+ + Sbjct: 399 DAARYFLTMRSPDSHFDFDMELAKSESSDNPVYYAQYAHARICSMLRQAKEAG------I 452 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 P + +L+ +A++ VIE A + P+++ Y+ DLA+ FH ++ Sbjct: 453 TPSRDANYALITNEKAFELLKRVADFESVIEQAAEHRAPHRITNYIQDLAAHFHKFYNAE 512 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ + + + ++ AV + + L ++GV SP +M Sbjct: 513 K-------VLTDDIEKSRAYVAMIEAVRITLQNALTLVGVSSPEKM 551 >gi|298530549|ref|ZP_07017951.1| arginyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1] gi|298509923|gb|EFI33827.1| arginyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1] Length = 551 Score = 554 bits (1427), Expect = e-155, Method: Composition-based stats. Identities = 196/584 (33%), Positives = 328/584 (56%), Gaps = 34/584 (5%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 +FA ++ +L+E+ ++ + K D+ IE PR+ + G L+ N AM+L+ G P Sbjct: 1 MFA--REYVEKHLREVVHELGL--KWPDKASIETPREKSFGDLACNLAMLLAGQAGEKPR 56 Query: 63 TIAELIVAR-IKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +A + + S+ IAG GF+N PS+ + I+ I +G + +G+ Sbjct: 57 DLAARFKDMMLGRAEKLQSIEIAGPGFLNFTFKPSFWQSIIPVIQKEQEGFGSSDLGRKH 116 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 K+ +E+VSANPTGP+H+GH R A +GD+LA ++ F+G+E + EYY+NDAG Q+ L SV Sbjct: 117 KIQVEYVSANPTGPLHIGHGRGAALGDSLARILRFAGFEASTEYYLNDAGRQMYVLGDSV 176 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 RY+Q L +++L +Y G YL+ + L ++ +LL E + + ++ +VQ++ Sbjct: 177 LIRYEQ-LCGLEAELSPDHYQGEYLQDDARALYQEHGRDLLKQDRESAIALCREKAVQSI 235 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 + I++DL+ ++H ++ SE D ++ ++ L + Y Sbjct: 236 LAGIKEDLEHFGVEHQVWFSEQGLF--DRGEVQKTLEWLQEKDMAY-------------- 279 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 + L FRST GDD DR L KSDG+ TYFA+D+AY K+ RGF+ ++ + G+DH Sbjct: 280 --IHDGALWFRSTSFGDDKDRVLQKSDGALTYFASDIAYHHNKFNRGFETVVDIWGADHH 337 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 GY R++A A+ + V+L +LV L R G + MS R+G+F+TLR V++EVG D+ Sbjct: 338 GYAPRMQAAVQALGRPAGSLRVILVQLVNLLRAGQQVSMSTRSGEFVTLRQVMEEVGVDA 397 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 RF+ L RK+ LDFD +VK++S +NPVFYVQYA+AR S+F +A + D P Sbjct: 398 CRFIFLSRKSDSHLDFDLEEVKKKSMDNPVFYVQYAHARICSVFAKAAERG----IDTGP 453 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 +L L+ L +P +++ A P+ ++FYL +LA + H +++ Sbjct: 454 EPQSLLHLLESQEDLDLLKQLEMFPDMVQAAARNLSPHHISFYLRELAGLLHRYYTVH-- 511 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A++R+L R+ L+ A A ++++GL ++GV +P +M Sbjct: 512 ----SVLNADSRELIHARMLLLQATARVLSNGLKLLGVHAPEKM 551 >gi|289579360|ref|YP_003477987.1| arginyl-tRNA synthetase [Thermoanaerobacter italicus Ab9] gi|289529073|gb|ADD03425.1| arginyl-tRNA synthetase [Thermoanaerobacter italicus Ab9] Length = 561 Score = 553 bits (1426), Expect = e-155, Method: Composition-based stats. Identities = 202/590 (34%), Positives = 326/590 (55%), Gaps = 37/590 (6%) Query: 2 YLFADFSSRLKN----YLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL 57 + + +K+ +K + + + + I IE P++ HG L+ N AMI+++ Sbjct: 3 NIIQKVKNEIKDMVTTAIKNSVKEGLINIESIPEIEIEEPKEKQHGDLAINTAMIMAKQA 62 Query: 58 GLDPLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116 + P IAE+IV+++ + ++ + +AG GFIN +L+ +L + L + G +YGR Sbjct: 63 KMSPKKIAEIIVSKMDTSNTFIEKIEVAGPGFINFFLNDKFLEETLKLVYKRGKDYGRVN 122 Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176 IGKG KV +EFVSANPTGPMH+G+ R +GD LAS++ ++GY+VTRE+YINDAG QI Sbjct: 123 IGKGKKVQVEFVSANPTGPMHMGNARGGALGDALASVLDYAGYDVTREFYINDAGNQIEK 182 Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236 S+ RY Q L +++PEG Y G + +E + Y + + P E+ + +Y Sbjct: 183 FGYSLEARYLQLL-GIPAEVPEGGYHGEDIIDRAREFLEIYGDKYKDAPSEERRKTLVEY 241 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 ++ ++ I++DL+ I++D++ SE + D + +I+ L ++GY YE Sbjct: 242 GLKKNLEKIKEDLELYGIEYDVWFSEQSLY--DSGEVYKVIEELKQKGYTYE-------- 291 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355 L F+ T+ G + D L++++G TY A+D+AY K K+ RGFD +I V Sbjct: 292 --------KDGALWFKMTLFGAEKDDVLVRANGFPTYLASDIAYHKNKFITRGFDWVINV 343 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 G+DH G++ ++ A+ +++V+L +LV+L G +KMSKR G +TLR ++D Sbjct: 344 WGADHHGHIAPMKGAMQALGIDPDRLDVVLMQLVKLIEGGQVVKMSKRTGRMVTLRDLID 403 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 EVG D+ RF R +DFD KEQS ENPVFYVQYA+AR SI RQ ++ Sbjct: 404 EVGKDAARFFFNMRSADSPIDFDLDLAKEQSNENPVFYVQYAHARICSIIRQLEEKVKIE 463 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + D +++ +E E LI LA +P I A P+++ Y+ D+AS+FH Sbjct: 464 NIDEVDLSLLKEE-----EEKDLIKKLAYFPEEITIAARTLTPHRITRYILDVASLFHSF 518 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ R V+ L R L+ AV ++I + L+I+ V +P M Sbjct: 519 YNSHR-------VKGVEENLMKARFVLILAVKTVIKNALDILKVTAPERM 561 >gi|161830885|ref|YP_001595968.1| arginyl-tRNA synthetase [Coxiella burnetii RSA 331] gi|189083530|sp|A9N9G2|SYR_COXBR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|161762752|gb|ABX78394.1| arginyl-tRNA synthetase [Coxiella burnetii RSA 331] Length = 586 Score = 553 bits (1426), Expect = e-155, Method: Composition-based stats. Identities = 209/615 (33%), Positives = 321/615 (52%), Gaps = 61/615 (9%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + L ++ + K ++ ++ I I D HG +TN A+ LS+ G+ P Sbjct: 1 MKQQIETLLNQAIERLKTKGVLKPEVTPVIKITHTTDPQHGDFATNLALTLSKAAGMSPH 60 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +AE IV + + V IAG GFIN +++ + ++SSI+ +G +YGR+ +GKG + Sbjct: 61 ALAEKIVEALPPSGQITEVEIAGPGFINFFVTEGSYQTVVSSILKAGKDYGRSEMGKGQR 120 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V++E+VSANPTGP+HVGH R A G +A+L+ +G+EV REYY+NDAG Q+ LALSV+ Sbjct: 121 VHMEYVSANPTGPLHVGHGRGAAYGACVANLLNAAGFEVHREYYVNDAGRQMGILALSVW 180 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL--------LNFPEE------- 227 RY Q Y +LP+ Y G Y+ + + L KY + PEE Sbjct: 181 VRYLQG-YEASIELPKNAYQGEYIIDIAEALKAKYGKQFYHSVESIQAKIPEEIDSNADP 239 Query: 228 -----------------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K V ++ +++ I++DL+ + +D + E R Sbjct: 240 EAYLDAWVTAQKDLLGPKDFECVFQAALDSILNDIKNDLEEFGVTYDDWFPESRLVR--E 297 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I++ +D L + GYVYE FR+T +GD+ DR L++ +G Sbjct: 298 GLIQEGLDLLTKHGYVYE----------------KNGAQWFRATALGDEKDRVLIRKNGL 341 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFAAD+AY K+ +G+D +I + G+DH GY+ R+ + + ++++LL + Sbjct: 342 PTYFAADVAYHLHKFNQGYDQIIDIFGADHHGYIPRIRGFLKGLGKAPEKLHILLVQFAI 401 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 LYR + MS R G F+TLR + EVG+D+ RF + RK + LDFD K QS ENP Sbjct: 402 LYRGNEKVSMSTRGGTFVTLRELRHEVGNDAARFFYIMRKPDQHLDFDLELAKSQSNENP 461 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+Y+QYA+AR S+FRQ K + D PR + E +L+ L YP VI+ Sbjct: 462 VYYIQYAHARICSVFRQLKTTQKNWDR---PRGMENLSLLSTNYEKELLATLGRYPEVIK 518 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A + P+ LA YL LA+ FH +++ R + L RL L++AV II Sbjct: 519 RAAMNYAPHLLAHYLQTLANQFHTYYNAERF-------LIEDDNLRNARLNLINAVQQII 571 Query: 571 NSGLNIIGVESPNEM 585 +GL ++GV +P EM Sbjct: 572 RNGLTLLGVSAPEEM 586 >gi|223983739|ref|ZP_03633910.1| hypothetical protein HOLDEFILI_01191 [Holdemania filiformis DSM 12042] gi|223964285|gb|EEF68626.1| hypothetical protein HOLDEFILI_01191 [Holdemania filiformis DSM 12042] Length = 548 Score = 553 bits (1426), Expect = e-155, Method: Composition-based stats. Identities = 197/587 (33%), Positives = 316/587 (53%), Gaps = 41/587 (6%) Query: 1 MY-LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M + + + + N +K+ + E +VIE P++ HG STNAAM L++ L Sbjct: 1 MNQIETNLKTCIINAVKQAF-DLDWESG---DVVIEIPKEKIHGDYSTNAAMRLTKQLRQ 56 Query: 60 DPLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +P IA+ ++ + + V IAG GFIN ++ + L ++ ++ YGR+ G Sbjct: 57 NPRMIAQQLIDHLDLKQGSVAKCEIAGPGFINFFMESASLASVIGVVLQENENYGRSDAG 116 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 +G KV++E+VSANPTG +H GH R A +GD++ LM F+GY+VTREYY+NDAG QI +A Sbjct: 117 QGLKVDVEYVSANPTGDLHPGHARGAAMGDSVTRLMKFAGYDVTREYYVNDAGNQIRNMA 176 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 LS+ RY QA ++++PE Y G L + ++L +Y +L + + + + + Sbjct: 177 LSLQARYLQAC-GVEAEVPEDGYHGPDLIKIAQDLKQEYGEDLAHKDKAETYSFFRQQGL 235 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 QA + ++ DL A ++ D++ SE + D + ++ L QG YE Sbjct: 236 QAELAKLKADLAAFGVEFDVWTSEQSIY--DRGMVDKALNTLKAQGMTYES--------- 284 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 L R+T GDD DR L+KSDGSYTY D+AY K++RG+D +I G+ Sbjct: 285 -------EGALWLRTTDFGDDKDRVLVKSDGSYTYLTPDIAYHVDKFDRGYDKLIDFFGA 337 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GY+ RL+A ++ + K + V + ++ R+ +DG KMSKR G + L+ +V+E G Sbjct: 338 DHHGYIARLKAAVQSLGKNKDDLEVDIIQMARMVKDGEEFKMSKRTGKAVALKDLVEEAG 397 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+VR+ + R +DFD K+Q+ ENPV+Y QYA+AR SI R DI ++ Sbjct: 398 VDAVRYFFVSRAADTHMDFDIDMAKKQTNENPVYYAQYAHARMCSILRSGADIPLADHYE 457 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L EL L+ H+ E+ + +A ++P+K+ Y+ LA +FH ++ Sbjct: 458 LIT----------HEKELDLLKHINEFASTVADAAKTRQPHKMCNYITRLAQLFHTFYAD 507 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + N +L+ RL LV A + + L +IGV +P +M Sbjct: 508 C------KVLDRTNLELSAQRLALVKASEMTLRNALTLIGVSAPEKM 548 >gi|52842248|ref|YP_096047.1| arginyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|81377147|sp|Q5ZTX7|SYR_LEGPH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|52629359|gb|AAU28100.1| arginyl tRNA synthetase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 589 Score = 553 bits (1426), Expect = e-155, Method: Composition-based stats. Identities = 208/615 (33%), Positives = 334/615 (54%), Gaps = 61/615 (9%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + A LK L + ++ + I +E +D AHG +TN A++L++P P Sbjct: 4 MKAIIEYLLKQALINLQQSGEMPIDLEIEIKVENAKDPAHGDYATNLALVLAKPCRQAPK 63 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +AE +VA I +DP V+ + IAG GFIN ++ + I+S I+ G E+GR +G+ K Sbjct: 64 VLAERLVAVIPVDPSVEKIEIAGAGFINFFMRSTARSLIISEILNKGKEFGRGNLGQSQK 123 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V IEFVSANPTGP+HVGH R A G TL +++ +GY+VT EYY+NDAG Q+N LA+SV+ Sbjct: 124 VLIEFVSANPTGPLHVGHGRGAAFGATLGNVLKAAGYDVTLEYYVNDAGRQMNILAVSVW 183 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL--------NFPEEK------ 228 RY + L P Y G Y+ + +E+ + ++ + N P ++ Sbjct: 184 LRYLE-LAGEPIVFPANGYKGQYVYEIAQEIWSEQGNQFVHPWISVVENLPADEPEGGDK 242 Query: 229 ------------------WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 ++++ ++ I+DDL+A ++ D + SE + Sbjct: 243 ETYIDAIIARAQSLLGKDGFANFHQHALKTVLDDIKDDLQAFGVRFDSWFSEQSLF--ED 300 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I I L +G+ YE L FR+T GD+ DR L++++G Sbjct: 301 GSIEKGIQALKDRGHTYE----------------REGALWFRATDFGDEKDRVLVRANGQ 344 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFA+D+AY KY+RGFD +I + G+DH GYV R++ A+ ++ ++V+L + Sbjct: 345 TTYFASDVAYHWNKYDRGFDRVIDIFGADHHGYVTRIKTAVKALGHDESALDVILVQFAI 404 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 LYR G ++MS R+G F+TLR + +EVG+D+ R+ + RK + +DFD K +S +NP Sbjct: 405 LYRGGDRVQMSTRSGSFVTLRELREEVGNDAARYFYVARKPEQHMDFDLDLAKSESSDNP 464 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+Y+QYA+AR S+ RQ K+ D D+ +N+ E + E LI +A YP VI+ Sbjct: 465 VYYIQYAHARICSVLRQLKERGLKWDKDMGLKNLDLLEQQ---HEATLISLIARYPEVIQ 521 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A + EP++LA+YL +LA+ H +++ + + +L RL L+ +V ++ Sbjct: 522 SAAASCEPHQLAYYLRELANGLHSYYNAIQ-------LLCEQEQLRCARLCLLESVRQVL 574 Query: 571 NSGLNIIGVESPNEM 585 N+GL I+GV +P M Sbjct: 575 NNGLAILGVSAPESM 589 >gi|103485609|ref|YP_615170.1| arginyl-tRNA synthetase [Sphingopyxis alaskensis RB2256] gi|98975686|gb|ABF51837.1| arginyl-tRNA synthetase [Sphingopyxis alaskensis RB2256] Length = 580 Score = 553 bits (1426), Expect = e-155, Method: Composition-based stats. Identities = 256/584 (43%), Positives = 349/584 (59%), Gaps = 12/584 (2%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 L A L + ++ V + + +ERP D AHG LSTNAAM+L++ G P Sbjct: 5 LHARILDHLARVIGDLQVAGDVPAGLDRAGLTVERPHDPAHGDLSTNAAMVLAKLTGTHP 64 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +AE + R+ + DV V +AG GF+N+ L+ + L+ I YG + +G G Sbjct: 65 RQLAEKLAGRLAMLEDVADVAVAGPGFVNIRLTDQAWQNELAVIADQKDRYGMSPVGAGK 124 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 VNIEFVSANPTGPMH+GHCR AVVGD LA+L+AF+G+ V REYYINDAG Q++ LA S Sbjct: 125 TVNIEFVSANPTGPMHMGHCRGAVVGDALANLLAFTGHRVIREYYINDAGGQVDILARSA 184 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 RY++AL + ++ EG YPG YLK VG+ LA + + PE WL I + +V AM Sbjct: 185 HQRYREALGESLGEIAEGLYPGDYLKPVGEALAADFGGRYADAPETDWLAIFRARTVAAM 244 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 M+ IR+DL L I HD F SE D D L + VY+G+L PPK + ++ Sbjct: 245 METIREDLALLGISHDRFASEADLVA--AGKPDDAEAWLRERDLVYDGVLEPPKGEVSKD 302 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 + LFRST GDD DRP+ K DGS+TYF DLAY K R D +I + G+DH+ Sbjct: 303 WE-PIALPLFRSTKFGDDQDRPIRKPDGSWTYFGVDLAYHFEK-ARDADELIDIWGADHA 360 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 G V R+ A A A++E + + +V L ++VRL R G P+KMSKRAG+F+TL V+ EVG D Sbjct: 361 GTVMRIVAAAEALTEGRKRFDVKLVQIVRLLRAGEPVKMSKRAGNFVTLADVIREVGKDV 420 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 VRFMML RK +DFDF V E SK+NPVFYVQYA+AR S+ +A + +L Sbjct: 421 VRFMMLTRKAEASMDFDFATVVEASKDNPVFYVQYAHARICSLASRAAEAGIEL------ 474 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 P + D L L+ AE+PR++E A A+EP+++AF+L LA+ FH W+ G Sbjct: 475 -GDPPDLALLDGPSLTLVKRAAEFPRIVEAAAAAREPHRIAFFLEGLAAEFHALWNTGNA 533 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +P RF N ++ RL L A+ +I +GL ++GVE +EM Sbjct: 534 DPTRRFAYPENLPVSRARLFLAAAIGQVIRNGLALMGVEPTHEM 577 >gi|237749364|ref|ZP_04579844.1| arginyl-tRNA synthetase [Oxalobacter formigenes OXCC13] gi|229380726|gb|EEO30817.1| arginyl-tRNA synthetase [Oxalobacter formigenes OXCC13] Length = 571 Score = 553 bits (1426), Expect = e-155, Method: Composition-based stats. Identities = 203/599 (33%), Positives = 313/599 (52%), Gaps = 56/599 (9%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 S L++ + I +EK+ + +ERPRD +HG ++ N AM LS+PL +P IA+ Sbjct: 9 ISGLLQDAVNAIIDGQSLEKQ--PVVALERPRDASHGDIACNIAMQLSKPLKKNPREIAQ 66 Query: 67 LIVARIKIDPDV----DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 I++ + +P +S IAG GFINL L+ S + ++ +++ +YG + G G K Sbjct: 67 TILSSLMTNPLHQGLIESGEIAGPGFINLRLTASAKQDVVKAVMDQKDKYGYSNTGTGRK 126 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V +EFVSANPTGP+HVGH R +GD++++L A GY+VTRE+Y NDAG QI+ L LSV Sbjct: 127 VMVEFVSANPTGPLHVGHGRQGALGDSISALFASQGYDVTREFYYNDAGVQIDNLTLSVQ 186 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIVKDY 236 R + L + PE Y G Y+ + + A + + + L ++++ Sbjct: 187 AR-AKGLKPGEEGWPESAYNGDYIADIATDFLAKKTVAARNCETVTASGDPDDLKSIREF 245 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 +V + +DL A I D F E +R ++D +D L ++G +E Sbjct: 246 AVAYLRNEQDNDLNAFGIHFDNFFLESSLYR--DGKVKDAVDTLTKEGKTFES------- 296 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 L R+T GDD DR + K+DG+YTYF D+AY K+ RGFD +I + Sbjct: 297 ---------EGALWLRTTEYGDDKDRVMRKTDGTYTYFVPDVAYHINKFSRGFDKVINIQ 347 Query: 357 GSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414 GSDH G V R+ A V KA + +L ++V + +DG +K+SKRAG ++T+R ++ Sbjct: 348 GSDHHGTVARVRAGLQGVNKGIPKAFPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLI 407 Query: 415 DE-------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467 + G D+VRF ++ RK FD QS ENPV+YVQYA+AR S+F Q Sbjct: 408 EWSGAGDVVRGRDAVRFFLISRKADTEFVFDVDLALSQSDENPVYYVQYAHARICSVFSQ 467 Query: 468 AKDIFPDLD-FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 LD DL P E L+ L++YP ++ A P+ +AFYL Sbjct: 468 WGGDESALDNVDLSP--------LTSPHEYALLSKLSDYPDILTRAQEELSPHLVAFYLR 519 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +LA HG+++ R + + + RL L+ A ++ +GL ++GV +P +M Sbjct: 520 ELAGELHGYYNAERF-------LVEDETVKLARLALLKATRQVLRNGLALLGVSAPTKM 571 >gi|212213468|ref|YP_002304404.1| arginyl-tRNA synthetase [Coxiella burnetii CbuG_Q212] gi|238065086|sp|B6J3D4|SYR_COXB2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|212011878|gb|ACJ19259.1| arginyl-tRNA synthetase [Coxiella burnetii CbuG_Q212] Length = 592 Score = 553 bits (1426), Expect = e-155, Method: Composition-based stats. Identities = 210/615 (34%), Positives = 322/615 (52%), Gaps = 61/615 (9%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + ++ L ++ + K ++ ++ I I D HG +TN A+ LS+ G+ P Sbjct: 7 MKQQIATLLNQAIERLKTKGVLKPEVTPVIKITHTTDPQHGDFATNLALTLSKAAGMSPH 66 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +AE IV + + V IAG GFIN +++ + I+SSI+ +G +YGR+ +GKG + Sbjct: 67 ALAEKIVEALPPSGQITEVEIAGPGFINFFVTEGSYQTIVSSILKAGKDYGRSEMGKGQR 126 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V++E+VSANPTGP+HVGH R A G +A+L+ +G+EV REYY+NDAG Q+ LALSV+ Sbjct: 127 VHMEYVSANPTGPLHVGHGRGAAYGACVANLLNAAGFEVHREYYVNDAGRQMGILALSVW 186 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL--------LNFPEE------- 227 RY Q Y +LP+ Y G Y+ + + L KY + PEE Sbjct: 187 IRYLQG-YEASIELPKNAYQGEYIIDIAEALKAKYGKQFYHSVESIQAKIPEEIDSNADP 245 Query: 228 -----------------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K V ++ +++ I++DL+ + +D + E R Sbjct: 246 EAYLDAWVTAQKDLLGPKDFECVFQAALDSILNDIKNDLEEFGVTYDDWFPESRLVR--E 303 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I++ +D L + GYVYE FR+T +GD+ DR L++ +G Sbjct: 304 GLIQEGLDLLTKHGYVYE----------------KNGAQWFRATALGDEKDRVLIRKNGL 347 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFAAD+AY K+ +G+D +I + G+DH GY+ R+ + + ++++LL + Sbjct: 348 PTYFAADVAYHLHKFNQGYDQIIDIFGADHHGYIPRIRGFLKGLGKAPEKLHILLVQFAI 407 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 LYR + MS R G F+TLR + EVG+D+ RF + RK + LDFD K QS ENP Sbjct: 408 LYRGNEKVSMSTRGGTFVTLRELRHEVGNDAARFFYIMRKPDQHLDFDLELAKSQSNENP 467 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+Y+QYA+AR S+FRQ K + D PR + E +L+ L YP VI+ Sbjct: 468 VYYIQYAHARICSVFRQLKTTQKNWDR---PRGMENLSLLSTNYEKELLATLGRYPEVIK 524 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A + P+ LA YL LA+ FH +++ R + L RL L++AV II Sbjct: 525 RAAMNYAPHLLAHYLQTLANQFHTYYNAERF-------LIEDDNLRNARLNLINAVQQII 577 Query: 571 NSGLNIIGVESPNEM 585 +GL ++GV +P EM Sbjct: 578 RNGLTLLGVSAPEEM 592 >gi|58699209|ref|ZP_00374017.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila ananassae] gi|58534275|gb|EAL58466.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila ananassae] Length = 568 Score = 553 bits (1426), Expect = e-155, Method: Composition-based stats. Identities = 257/586 (43%), Positives = 364/586 (62%), Gaps = 18/586 (3%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +F SS + + L E+ + + + I +E P + AHG + TN AM+L++ + Sbjct: 1 MNIFKRASSLILSKLNELKQRGIINTDTTNFI-VEPPSNRAHGDIYTNVAMVLAKHEKKN 59 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P+ IAE++ ++ +V V IAG GFIN++L IL I E+G IG Sbjct: 60 PIEIAEVLAKEFELFDEVAKVEIAGPGFINIHLKIKVWHGILKQINELKTEFGTLDIGNN 119 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +N+EFVSANPTGP+H+GH R AV GD LA+L+ GY+VT+EYYINDAGAQI+TL S Sbjct: 120 QAINVEFVSANPTGPLHIGHARGAVFGDVLANLLKKVGYKVTKEYYINDAGAQIDTLIKS 179 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V+ RY++AL + +G YPG YLK +G+ LA KY E L + + I+++Y++ Sbjct: 180 VYLRYKEAL-GEKISIEKGLYPGEYLKPIGEGLAKKYGKEFLKKQDNQ---IIREYTLSF 235 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 ++++I++D+ L + HD+F SE + + I + I L+ +G VYEG L PK K ++ Sbjct: 236 ILELIKEDMNLLGVNHDVFTSEYELQK--SGKIEESIKILSDKGLVYEGYLEKPKGKESE 293 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 RK++LFRST GDDVDR L K GS+TYFA+D+AY K RGF+NMI +GSDH Sbjct: 294 NWT-SRKEMLFRSTKFGDDVDRALKKDGGSWTYFASDIAYHFDKISRGFNNMIVELGSDH 352 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GYVKRL+AV +A+S+ +A+I V L +V + +G P+KMSKR+G+F+T R VV+EVG D Sbjct: 353 GGYVKRLKAVVSALSDDQAKIEVKLHNIVNFFENGKPVKMSKRSGNFLTARDVVEEVGRD 412 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 RF+ML RKN +LDFDF KVKEQSK+NP+FYVQYA+AR S+ R A P D L Sbjct: 413 ITRFIMLTRKNDMVLDFDFAKVKEQSKDNPIFYVQYAHARAHSLMRNAPKELPTADPSLL 472 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 EL LI LA++P V+E A EP+++ FYL ++A FH W +G+ Sbjct: 473 RTGG----------ELFLIKTLAKWPDVVEIAARLCEPHRITFYLLEVAEAFHVLWGYGK 522 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586 + +RF+ +N LT A+A +I SGL+I +E EMS Sbjct: 523 SDLNMRFILEDNLNLTAAVCFSCRALAHVIASGLSIFNIEPLKEMS 568 >gi|87199111|ref|YP_496368.1| arginyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444] gi|109895012|sp|Q2G9D9|SYR_NOVAD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|87134792|gb|ABD25534.1| arginyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444] Length = 582 Score = 553 bits (1426), Expect = e-155, Method: Composition-based stats. Identities = 252/585 (43%), Positives = 351/585 (60%), Gaps = 18/585 (3%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 L ADF+ + L ++ + + + E PRD +HG L+TNAAM+L++P G + Sbjct: 7 NLHADFARVIDAALDALEAAGTLPGTLSRSAVTCEPPRDPSHGDLATNAAMVLAKPAGTN 66 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A + A ++ +P V S IAG GFINL L+ R L+ I +G +YGR+ +G Sbjct: 67 PRALATALAAELEKEPRVVSAEIAGPGFINLRLTDDAWRGELALIGSAGADYGRSTMGGS 126 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 VN+E+VSANPTGPMH+GHCR AVVGD LA L+AFSG++V +EYY+NDAGAQ++ LA S Sbjct: 127 KVVNVEYVSANPTGPMHMGHCRGAVVGDALADLLAFSGHQVIKEYYVNDAGAQVDVLARS 186 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V RY++AL ++PEG YPG YL VGK LA+++ + E WL + + +V A Sbjct: 187 VHMRYREAL-GETVEIPEGLYPGDYLVPVGKALAEEFGDKYAKAAEADWLILFRTRAVAA 245 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 MM +IR DL L I HD+F SE + + L VY+G+L PK KT + Sbjct: 246 MMDMIRSDLATLGIHHDLFSSEAELQA--SGKVDAAEQWLRAHDLVYDGLLEAPKGKTPE 303 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + LFRST GDD DRP+ KS+G++TYF ADLAY K + D ++ + G+DH Sbjct: 304 DWE-PVVLPLFRSTKFGDDQDRPIKKSNGAWTYFGADLAYHFQKAQT-ADALVDIWGADH 361 Query: 361 SGYVKRLEAVAAAV----SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 +G VKR++A AA+ V L ++V+L RDG P+KMSKR+G+F+TL VV+E Sbjct: 362 AGTVKRIKAAVAALTSADGGTPKPFEVKLVQMVQLLRDGEPVKMSKRSGNFVTLSDVVEE 421 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG D VRF ML RK +DFDF KV E SK+NPVFYVQYA+AR R+ D Sbjct: 422 VGKDVVRFTMLTRKPDAQMDFDFAKVVEASKDNPVFYVQYAHARICRNLRKGADEGFAPS 481 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 EL L+ A++PR IE A A+EP+++AF+L+DLAS FH + Sbjct: 482 SANLD--------LLGDEELALVKLAAQFPRTIEAAAAAREPHRIAFFLHDLASAFHSFY 533 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 + G + P RF+ A + +T RL L + +I +GL ++GVE+ Sbjct: 534 NLGNDRPDKRFIVAQDSAMTAARLFLAAQIGQVIRNGLAVLGVEA 578 >gi|260891979|ref|YP_003238076.1| arginyl-tRNA synthetase [Ammonifex degensii KC4] gi|260864120|gb|ACX51226.1| arginyl-tRNA synthetase [Ammonifex degensii KC4] Length = 564 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 202/581 (34%), Positives = 312/581 (53%), Gaps = 32/581 (5%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 L+ L + + L +E PR+ G +TN A L+ G P +A Sbjct: 14 LRQGLEKALAVTRSALSLPTTSLPPATLEVPREEGFGDFTTNLAFKLASRAGKPPREVAA 73 Query: 67 LIVARIKID--PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 L+ D P +D + +AG G++N YL P +L + L I++ G +YGR +G+ KVN Sbjct: 74 LLAEHFPSDASPYLDRLEVAGAGYLNFYLKPHWLEEALREILLKGEDYGRQDLGRRRKVN 133 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTG +H+G+ R A +GD++A+L+AF G+EVTREYYINDAG QI A S+ R Sbjct: 134 VEFVSANPTGLLHMGNARGAALGDSIAALLAFCGFEVTREYYINDAGYQIERFAASLEAR 193 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 Y+QA + D +P Y G L K ++ L+ E+ + ++++ ++ Sbjct: 194 YRQA-FGEDVPVPPDGYHGQDLVETVKRFISEHGDRYLHTSPEERREALVRFAIREKLEA 252 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 IR+ L+ + D++ SE + H + + I+ L R+G YE Sbjct: 253 IRNSLENFGVHFDVWFSEQELHA--SGKVAETIEELKRRGATYE---------------- 294 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 L FR++ G D L++++G TYFAAD+AY + K ERGF+ MI + G+DH G+V Sbjct: 295 KEGALWFRASAYGAPKDDVLVRANGLPTYFAADIAYHRNKLERGFEWMINLWGADHHGHV 354 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 RL+A A+ ++ V++ +LVRL R G ++MSKRAG+++TL ++ EVG D+ R+ Sbjct: 355 PRLKAALQALGYDPERLTVIIMQLVRLTRGGEAVRMSKRAGEYVTLDDLLAEVGKDAARY 414 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 +WR LDFD K QS ENPV+Y+QYA+AR S+FRQ + L P Sbjct: 415 FFVWRSADAHLDFDLELAKAQSMENPVYYIQYAHARIASLFRQLAERGK----SLPPPEK 470 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 I + E +L+ LA +P +E A + P++LA YL+DL+S+FH ++ R Sbjct: 471 IDFSFLREPEERRLMYKLALFPEEVEGAALNLAPHRLAAYLHDLSSLFHSFYNEHR---- 526 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L RL L A ++ GL ++G+ +P M Sbjct: 527 ---IIGAGSGLEEARLGLAAATQLVLRQGLKLLGISAPERM 564 >gi|295111752|emb|CBL28502.1| arginyl-tRNA synthetase [Synergistetes bacterium SGP1] Length = 572 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 198/577 (34%), Positives = 304/577 (52%), Gaps = 30/577 (5%) Query: 13 NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72 L+ + K + L +ERPR G ++N AM L+R + P IA I + Sbjct: 22 AALRTAEACGKELPEALS-FELERPRRADQGDRASNVAMQLARAFSMPPRDIAARIAGSL 80 Query: 73 KIDPDV--DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130 + D V +AG GFINL+LS + + S ++ G YG +G+G +V +EFVSA Sbjct: 81 QEGCQDLLDRVEVAGPGFINLFLSHRWFAEAASQVLQQGERYGAVDLGQGRRVQVEFVSA 140 Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190 NPTGP+H+GH R A VGD +A +++F+G+ V REYY+NDAG QI TL S RY + Sbjct: 141 NPTGPLHIGHGRGAAVGDAVARILSFTGWNVEREYYLNDAGLQIETLGRSTQARYFEVCG 200 Query: 191 NND-SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249 ++ + LPE Y G YL + + + + L P + LP + Y+ +++ IR+DL Sbjct: 201 RSELAPLPEDGYKGDYLLDLAERIRKEEGDRFLATPLAESLPWFERYAADHILEGIREDL 260 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 + + D + SE + + + +++L ++GY +E L Sbjct: 261 ERFGVLFDSWFSEASLY--ERDLVSHAMEDLKKRGYAFES----------------NGAL 302 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLE 368 F+ST DD DR L++S+G TYFA+D+AY K+ RGFD +I V G+DH GYV R++ Sbjct: 303 WFKSTAFADDKDRVLIRSNGVPTYFASDVAYHHDKFVRRGFDRVIDVWGADHHGYVPRMK 362 Query: 369 AVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428 A A+ LL +LV L RDG + MS RAG+F+TLR V+DEVG D+ RF L Sbjct: 363 AAVEAMGRAPDDFKALLIQLVALKRDGKIVSMSTRAGEFVTLRSVLDEVGVDATRFFFLM 422 Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488 R++ LDFD K+QS +NPV+Y+QYA+AR S+ R+ + D+ +P Sbjct: 423 RRSDSQLDFDLDLAKKQSSDNPVYYLQYAHARISSLLREWEGRGGDVAALRRDGTPLPDL 482 Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548 + L LA +P + A+ P+ + Y +LA FH ++ R + Sbjct: 483 LFDNREARALAETLATFPVEMAGASADLAPHVVTAYALNLAGAFHSFYNTNR-------I 535 Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++ RL+L AV ++ + L ++GV +P M Sbjct: 536 LGESTEVERGRLRLAEAVRIVLATCLGLLGVSAPERM 572 >gi|109895009|sp|Q2Y676|SYR_NITMU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS Length = 581 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 203/608 (33%), Positives = 312/608 (51%), Gaps = 62/608 (10%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 DF S + L+ + + LD I RPR +HG S N AM L++PL P IA Sbjct: 8 DFKSHFTDILRNALNERGLADLNLD-IEFARPRQSSHGDYSCNLAMQLAKPLRQKPRDIA 66 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 + + P ++ V IAG GFINL+L+ S ++ ++ SG ++G + +G G K+ + Sbjct: 67 QSLATAFSASPYLEKVEIAGAGFINLFLTTSAKQQFSRYVLESGEKFGHSSMGAGEKIQV 126 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+HVGH R A G +LA+++A +GY VTREYYINDAG Q++ LALS + RY Sbjct: 127 EFVSANPTGPLHVGHGRGAAFGASLANVLAAAGYSVTREYYINDAGRQMDILALSTWLRY 186 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE-------------EKWLP- 231 + L S P Y G Y++ + + + ++ ++ PE E L Sbjct: 187 LE-LNGVASAFPPNAYQGEYVRDMARLIHKAHAGRYVHEPELLFDRVAGAEADTEAALDG 245 Query: 232 --------------IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277 + ++ + + R+DL + DI+ SE D + + Sbjct: 246 LIANAKKLLGQDYAYIHNFVLNEQLGDCRNDLMEFGVTFDIWFSEQSLF--DSGGVAQAV 303 Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337 L Y+Y+ FRS+ GD+ DR + + +G +TYFA+D Sbjct: 304 HLLEEGNYLYQ----------------QDGAKWFRSSHFGDEKDRVVQRENGQFTYFASD 347 Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397 +AY K+ RGFD +I + G+DH GY+ R++ A++ ++ + L + LYRDG Sbjct: 348 IAYHLNKFSRGFDRVIDIWGADHHGYISRVKGAMQALALDPEKLEIALVQFAVLYRDGKK 407 Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457 + MS RAG+F+TLR + EVG+D+ RF + RK+ + LDFD K QS +NPV+YVQYA Sbjct: 408 VPMSTRAGEFVTLRELRQEVGTDAARFFYVLRKSDQHLDFDLDLAKSQSTDNPVYYVQYA 467 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 +AR S+ Q + D + +EL L+ L +YP +E A Sbjct: 468 HARVCSVLEQWGE-------DPGMLVTADTSALTGAAELSLLQKLIDYPETVEAAAREFS 520 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 P+ +AFYL +LA FH +++ R + + RL LV AV ++N+GL ++ Sbjct: 521 PHLIAFYLKELAGEFHSYYNSTRF-------LVPEMTVRLARLALVAAVRQVLNNGLKLL 573 Query: 578 GVESPNEM 585 GV +P +M Sbjct: 574 GVSAPAKM 581 >gi|325002812|ref|ZP_08123924.1| arginyl-tRNA synthetase [Pseudonocardia sp. P1] Length = 550 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 191/580 (32%), Positives = 287/580 (49%), Gaps = 37/580 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 + +++ +++ + ++ L +ERPR+ HG +TN A+ ++ G++P +A Sbjct: 7 LADLVRDVARDVLARRDLDVSALPADAGVERPRNPEHGDYATNIALRTAKKAGVNPRELA 66 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 + + V IAG GFINL L+ I+ ++ G YG GT++N+ Sbjct: 67 TWLAEELATRDGVAGAEIAGPGFINLRLAADAQGAIVGEVLAQGERYGTGDELAGTRMNL 126 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+H+G R A VGD L ++ G +VTREYYINDAGAQI+ A S+ Sbjct: 127 EFVSANPTGPIHLGGTRWAAVGDALGRVLVARGADVTREYYINDAGAQIDHFAASLIAAA 186 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245 + PE Y G Y+ + + + +L PE + + V M++ + Sbjct: 187 ------TGAPTPENGYGGAYIGEIAERVVAAE-PGILELPEAERHQAFRRTGVALMLEEM 239 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 R L D++ SE H + + D + L G +YE Sbjct: 240 RRSLHEFGTDFDVWFSELSLH--ESGAVEDSVRQLKDDGSLYE----------------K 281 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365 RST GDD DR ++KSDG+ Y A D+AY + K RGFD +Y++G+DH GY Sbjct: 282 DGAWWLRSTEQGDDKDRVVIKSDGTPAYVAGDIAYLRDKRGRGFDRCLYMLGADHHGYTV 341 Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425 RL+AVAAA + + + VL+ ++V L R G P++MSKRAG +TL VD VG D+ R+ Sbjct: 342 RLKAVAAAFGDDPSVVEVLIGQMVNLIRAGEPVRMSKRAGTIVTLEDFVDAVGVDAARYS 401 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 ++ LD D V ++ ENPVFYVQYA+AR S+ R A D+ + Sbjct: 402 LVRSSVDSTLDIDLDLVSSRTSENPVFYVQYAHARLSSLARNAADLGVEPGDGYG----- 456 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 E LI L E+P V+ A +EP+++A YL LA +H + R P+ Sbjct: 457 ---LLVHDREGDLIRTLGEFPDVVRTAAELREPHRVARYLESLAGAYHKFYDSCRVLPQG 513 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L RL L A ++ +GL ++GV +P M Sbjct: 514 ---DEEISDLHRARLSLCGAARRVLANGLGLLGVGAPERM 550 >gi|254283249|ref|ZP_04958217.1| arginyl-tRNA synthetase [gamma proteobacterium NOR51-B] gi|219679452|gb|EED35801.1| arginyl-tRNA synthetase [gamma proteobacterium NOR51-B] Length = 561 Score = 552 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 181/586 (30%), Positives = 291/586 (49%), Gaps = 36/586 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 +S L+ L+ + + + IE P+D +HG +TN AM+L++ G+ P A+ Sbjct: 5 LTSLLEQALQSLVAAGTLSDGEVVSPKIEHPKDPSHGDFATNLAMVLAKRAGMPPREFAQ 64 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 ++ + + ++ IAG GFIN LS + ++ I+ G EYG + KV +E Sbjct: 65 RLIDALPDNSLIEGTEIAGPGFINFRLSQASNTGVIREILTQGAEYGYQRHTRRGKVQVE 124 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+HVGH R A +GD+L+ L+ +G++V RE+Y NDAG QI+ LALSV R Sbjct: 125 FVSANPTGPLHVGHGRGAAIGDSLSRLLTATGWDVHREFYYNDAGQQISNLALSVQAR-A 183 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYS-----SELLNFPEEKWLPIVKDYSVQAM 241 + L +++ P+ Y G Y+ + K + E+ + L ++ ++V + Sbjct: 184 KGLTPENANWPDDGYRGEYIADLADAFLKKEAVAAADREVAANGDSDDLDNIRAFAVAWL 243 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 + DLKA +Q D + E + G + +++ L G+ YE Sbjct: 244 RREQDADLKAFGVQFDEYFLESSLYDG--GEVDRVVEELTINGHTYE------------- 288 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 L RST GDD DR + K +G YTYF D+AY + K+ RG+ +I G+DH Sbjct: 289 ---QDGALWLRSTEFGDDKDRVMRKREGGYTYFVPDVAYHRNKWRRGYQRVINEQGADHH 345 Query: 362 GYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 + R+ A + +L ++V + RDG +K+SKRAG ++TL ++D VG Sbjct: 346 STITRVRAGLQGLDAGIPDGWPEYVLHQMVTVMRDGAEVKLSKRAGSYVTLSDLIDWVGR 405 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ RF + R + L FD + QS ENPV+Y+QYA+AR S+ R+A+ PD Sbjct: 406 DATRFFLTARAATSQLTFDIDLARSQSNENPVYYIQYAHARVCSVERKARQQDPDW---T 462 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + ++ + L L + L+ +P V+ A EP+ +A YL +A FH ++ Sbjct: 463 PTDGLESLDTLIEPEALALALTLSRFPEVVSTAAERLEPHDIANYLRGVAGEFHSFYNAH 522 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V L +I +GL ++GV +P M Sbjct: 523 KMLDAEPPVARARLALADA-------TRQVIANGLALLGVSAPESM 561 >gi|224475751|ref|YP_002633357.1| arginyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus TM300] gi|254782982|sp|B9DKQ7|SYR_STACT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|222420358|emb|CAL27172.1| putative arginyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus TM300] Length = 554 Score = 552 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 199/588 (33%), Positives = 315/588 (53%), Gaps = 37/588 (6%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L + + +++ + +E P+D +G STN AM+L++ + Sbjct: 1 MNIIDQVKQTLIEEITASVKAAGLAEEV-PEVKVEIPKDPKNGDYSTNIAMVLTKIAKRN 59 Query: 61 PLTIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IA+ IV + +V+ + IAG GFIN YL+ YL ++ + ++GRN K Sbjct: 60 PHEIAQAIVDHLDKSKANVEKIEIAGPGFINFYLNNQYLTAVIPEALEKDKDFGRNEDPK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 KV +E+VSANPTG +H+GH R A VGDTL++++ +GY+VTREYYINDAG QI LA Sbjct: 120 HQKVLVEYVSANPTGDLHIGHARNAAVGDTLSNILDAAGYDVTREYYINDAGNQITNLAH 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ RY QA+ +++LP Y G + ++GK+LA+K EL + PE++ L + + V Sbjct: 180 SIEARYDQAM-GKETELPADGYYGKDIINIGKDLAEK-RPELKDLPEDERLKVFRQLGVD 237 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M+ ++ DL N D + SE + D I+ +++ + GY YE Sbjct: 238 YEMEKLKKDLADFNTHFDGWFSETTLY--DKGEIKKVLELMKENGYTYEA---------- 285 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER--GFDNMIYVMG 357 R+T DD DR ++K DGSYTYF D+AY K+ R G D +I + G Sbjct: 286 ------DGATWLRTTDFNDDKDRVIIKKDGSYTYFLPDVAYHYDKFHRDGGQDILINLFG 339 Query: 358 SDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 +DH GY+ RL+A ++ + + ++VRL +DG +KMSKR G+ ITLR ++DEV Sbjct: 340 ADHHGYINRLKASVETYGIDADRLEIQIMQMVRLMQDGEEVKMSKRTGNAITLREIMDEV 399 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G D+ R+ + R DFD KE S ENPV+Y QYA+AR SI +QA + Sbjct: 400 GIDAARYFLTMRSPDTHFDFDMELAKENSAENPVYYAQYAHARISSILKQAGERG----- 454 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 + P + + L+ +AE+ +IE+A + P+++ Y+ +LAS FH ++ Sbjct: 455 -ITPSENADFSVITNDKAIDLLKKVAEFEPMIESAAEHRAPHRVTNYIQELASAFHKFYN 513 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V ++ K T + ++ AV + + L ++GV +P+ M Sbjct: 514 ADK-------VLTDDEKKTQAYVSMIAAVQITLRNALALVGVSAPHNM 554 >gi|54294929|ref|YP_127344.1| arginyl-tRNA synthetase [Legionella pneumophila str. Lens] gi|81368288|sp|Q5WV09|SYR_LEGPL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|53754761|emb|CAH16248.1| arginine tRNA synthetase [Legionella pneumophila str. Lens] Length = 589 Score = 552 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 207/615 (33%), Positives = 333/615 (54%), Gaps = 61/615 (9%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + A LK L + ++ + I +E +D AHG +TN A++L++P P Sbjct: 4 MKAIIEYLLKQALINLQQSGEMPIDLEIEIKVENAKDPAHGDYATNLALVLAKPCRQAPK 63 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +AE +VA I DP V+ + IAG GFIN ++ + I+S I+ G E+G+ +G+ K Sbjct: 64 VLAERLVAVIPADPSVEKIEIAGAGFINFFMRSTARSLIISEILNKGKEFGQGNLGQSQK 123 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V IEFVSANPTGP+HVGH R A G TL +++ +GY+VT EYY+NDAG Q+N LA+SV+ Sbjct: 124 VLIEFVSANPTGPLHVGHGRGAAFGATLGNVLKAAGYDVTLEYYVNDAGRQMNILAVSVW 183 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL--------NFPEEK------ 228 RY + L P Y G Y+ + +E+ + ++ + N P ++ Sbjct: 184 LRYLE-LAGEPIAFPANGYKGQYVYEIAQEMWSEQGNQFVHPWISVVDNLPADEPEGGDK 242 Query: 229 ------------------WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 ++++ ++ I+DDL+A ++ D + SE + Sbjct: 243 ETYIDAIIARAQSLLGKDGFANFHQHALKTVLDDIKDDLQAFGVRFDSWFSEQSLF--ED 300 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I I L +G+ YE L FR+T GD+ DR L++++G Sbjct: 301 GSIGKGIQALKDRGHTYE----------------REGALWFRATDFGDEKDRVLVRANGQ 344 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFA+D+AY KY+RGFD +I + G+DH GYV R++ A+ ++ ++V+L + Sbjct: 345 TTYFASDVAYHWNKYDRGFDRVIDIFGADHHGYVTRIKTAVKALGHDESALDVILVQFAI 404 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 LYR G ++MS R+G F+TLR + +EVG+D+ R+ + RK + +DFD K +S +NP Sbjct: 405 LYRGGDRVQMSTRSGSFVTLRELREEVGNDAARYFYVARKPEQHMDFDLDLAKSESSDNP 464 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+Y+QYA+AR S+ RQ K+ D D+ +N+ E + E LI +A YP VI+ Sbjct: 465 VYYIQYAHARICSVLRQLKERGLKWDKDMGLKNLDLLEQQ---HEATLISLIARYPEVIQ 521 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A + EP++LA+YL +LA+ H +++ + + +L RL L+ +V ++ Sbjct: 522 SAAASCEPHQLAYYLRELANGLHSYYNAIQ-------LLCEQEQLRCARLCLLESVRQVL 574 Query: 571 NSGLNIIGVESPNEM 585 N+GL I+GV +P M Sbjct: 575 NNGLAILGVSAPESM 589 >gi|212219516|ref|YP_002306303.1| arginyl-tRNA synthetase [Coxiella burnetii CbuK_Q154] gi|238065085|sp|B6J667|SYR_COXB1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|212013778|gb|ACJ21158.1| arginyl-tRNA synthetase [Coxiella burnetii CbuK_Q154] Length = 592 Score = 552 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 209/615 (33%), Positives = 321/615 (52%), Gaps = 61/615 (9%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + L ++ + K ++ ++ I I D HG +TN A+ LS+ G+ P Sbjct: 7 MKQQIETLLNQAIERLKTKGVLKPEVTPVIKITHTTDPQHGDFATNLALTLSKAAGMSPH 66 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +AE IV + + V IAG GFIN +++ + ++SSI+ +G +YGR+ +GKG + Sbjct: 67 ALAEKIVEALPPSGQITEVEIAGPGFINFFVTEGSYQTVVSSILKAGKDYGRSEMGKGQR 126 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V++E+VSANPTGP+HVGH R A G +A+L+ +G+EV REYY+NDAG Q+ LALSV+ Sbjct: 127 VHMEYVSANPTGPLHVGHGRGAAYGACVANLLNAAGFEVHREYYVNDAGRQMGILALSVW 186 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL--------LNFPEE------- 227 RY Q Y +LP+ Y G Y+ + + L KY + PEE Sbjct: 187 VRYLQG-YEASIELPKNAYQGEYIIDIAEALKAKYGKQFYHSVESIQAKIPEEIDSNADP 245 Query: 228 -----------------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K V ++ +++ I++DL+ ++ +D + E R Sbjct: 246 EAYLDAWVTAQKDLLGPKDFECVFQAALDSILNDIKNDLEEFSVTYDDWFPESRLVR--E 303 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I++ +D L + GYVYE FR+T +GD+ DR L + +G Sbjct: 304 GLIQEGLDLLTKHGYVYE----------------KNGAQWFRATALGDEKDRVLFRKNGL 347 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFAAD+AY K+ +G+D +I + G+DH GY+ R+ + + ++++LL + Sbjct: 348 PTYFAADVAYHLHKFNQGYDQIIDIFGADHHGYIPRIRGFLKGLGKAPEKLHILLVQFAI 407 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 LYR + MS R G F+TLR + EVG+D+ RF + RK + LDFD K QS ENP Sbjct: 408 LYRGNEKVSMSTRGGTFVTLRELRHEVGNDAARFFYIMRKPDQHLDFDLELAKSQSNENP 467 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+Y+QYA+AR S+FRQ K + D PR + E +L+ L YP VI+ Sbjct: 468 VYYIQYAHARICSVFRQLKTTQKNWDR---PRGMENLSLLSTNHEKELLATLGRYPEVIK 524 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A + P+ LA YL LA+ FH +++ R + L RL L++AV II Sbjct: 525 RAAMNYAPHLLAHYLQTLANQFHTYYNAERF-------LIEDDNLRNARLNLINAVQQII 577 Query: 571 NSGLNIIGVESPNEM 585 +GL ++GV +P EM Sbjct: 578 RNGLTLLGVSAPEEM 592 >gi|190572467|ref|YP_001970312.1| arginyl-tRNA synthetase [Stenotrophomonas maltophilia K279a] gi|229558810|sp|B2FJW0|SYR_STRMK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|190010389|emb|CAQ43997.1| arginyl-tRNA synthetase [Stenotrophomonas maltophilia K279a] Length = 562 Score = 552 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 188/587 (32%), Positives = 301/587 (51%), Gaps = 37/587 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 + + ++ + + L V+ERP+ HG +TNAAM+L++ +P +A Sbjct: 5 LRALISQGIEALRANGTLPADSLPPDFVVERPKTRDHGDFATNAAMLLAKAARSNPRALA 64 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 + +V + DV V IAG GFIN +L+P+ ++ +S++ +YGRNL G G V + Sbjct: 65 QALVEALPRSEDVSKVEIAGPGFINFHLAPAAYQREAASVIKEAHDYGRNLSGNGRTVGV 124 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 E+VSANPTGP+HVGH R A +GD +A ++ +G+ RE+Y NDAG QI LALS R Sbjct: 125 EYVSANPTGPLHVGHGRAAAIGDCVARVLDANGWNAKREFYYNDAGVQIENLALSTQARI 184 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDYSVQA 240 + + D PEG Y G Y+ V + D S ++ + + ++ ++V Sbjct: 185 KGIAPDQDG-WPEGGYRGEYIADVARAYMAGASVDLEGSTVVGAKDPDDMQAIRRFAVAY 243 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 + DL A + DI+ E + + + + L G+ YE Sbjct: 244 LRNEQNLDLAAFGVDFDIYFLESSLYA--DGKVAEAVAKLQASGHTYE------------ 289 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + L RST GDD DR + KSDG++TYF D+AY K++RG++ I +G+DH Sbjct: 290 ----EGGALWLRSTDFGDDKDRVMRKSDGTFTYFVPDVAYHLSKWQRGYERAITELGADH 345 Query: 361 SGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 G + R+ A A+ + +L ++V + R G +K+SKRAG + TLR +++E G Sbjct: 346 HGSLARVRAGLQAMEVGIPQGWPEYVLHQMVTVMRGGEEVKLSKRAGSYFTLRDLIEEAG 405 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ ++ RK L FD ++QS +NPVFYVQYA+AR S+ RQA++ + Sbjct: 406 RDATRWFLIARKPDSQLTFDIDLARQQSNDNPVFYVQYAHARVCSLLRQAQEKGLVYEQG 465 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + D + L L+ ++ YP V+E A +A EP+ +A YL +LA FH + Sbjct: 466 ---NGLANLGRLADDASLLLMNEISRYPEVVEAAGVALEPHLVAQYLRELAHAFHTWYHG 522 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V + +L L A ++ +GL ++GV +P +M Sbjct: 523 T-------PVLVEDAADRNAKLTLACAARQVLANGLELLGVSAPEKM 562 >gi|258405440|ref|YP_003198182.1| arginyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692] gi|257797667|gb|ACV68604.1| arginyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692] Length = 551 Score = 552 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 191/579 (32%), Positives = 312/579 (53%), Gaps = 32/579 (5%) Query: 8 SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 S+ + + L+ + + + ++ P+D G +++N AM+L++ G P +A Sbjct: 4 STYITSVLQTVVADRGWQ--WPAKASLDTPKDPNFGDVASNLAMVLAKQAGQKPRDLAAS 61 Query: 68 IVAR-IKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 + ++ + + IAG GF+N++ P++ ++ +S I +G YG++ +G+G V +E Sbjct: 62 LREEVLQRGAAIQDIEIAGPGFLNVFFKPAFWQQTVSVIQEAGQSYGQSDMGQGKTVQVE 121 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 +VSANPTGP+H+GH R A VGD+LA ++ +G+ VT EYY+NDAG Q+ L S+ +R Sbjct: 122 YVSANPTGPLHIGHGRGAAVGDSLARILRRTGHTVTTEYYLNDAGRQMQILGASIAYRVL 181 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 + L D+ PE +Y G Y++ + +EL D + L + L + + + +++ I+ Sbjct: 182 ELLGGPDT-FPEDHYQGGYIRDLAQELVDTRGASLSAMDWPELLEHCRQHGLTRILEGIK 240 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 DL+ ++H ++ SE D + + +LA +G YE Sbjct: 241 RDLRDFRVEHQVWFSEQSL--LDKGRVEATLTDLANRGLAYE----------------QD 282 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366 L F ST GDD DR L KSDG TYFA+D+AY KY RGFD ++ + G+DH GYV R Sbjct: 283 GALWFASTTFGDDKDRVLRKSDGDLTYFASDIAYHADKYARGFDTVVDIWGADHHGYVPR 342 Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 ++ A+ + V+L +LV L RDG + MS RAG F TL V EVG D+ RF+ Sbjct: 343 MKGAVQALGRASEDLQVILVQLVNLLRDGEQVSMSTRAGKFETLADVCAEVGPDAARFIF 402 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 L RK+ LDFD VK QS +NPV+YVQYA+AR S+ R+ + F+ P + Sbjct: 403 LSRKSDSHLDFDLELVKRQSMDNPVYYVQYAHARINSVLRKGAERG----FEPRPVSEAD 458 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 ++ L L +P V++ A P+ ++FYL +LA + H +++ Sbjct: 459 LALLDTAEDMDLFKKLDRFPEVVQGAARTLSPHHVSFYLQELAGLLHRYYNTH------S 512 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A + L R L+ AV ++++GL ++GV +P +M Sbjct: 513 VLYAESDALLQARFHLLLAVRQVLHNGLELLGVHAPEQM 551 >gi|254774331|ref|ZP_05215847.1| arginyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC 25291] Length = 550 Score = 552 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 190/582 (32%), Positives = 291/582 (50%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + L+N + + ++ L +V+ERPR+ HG ++N A+ L + +G +P Sbjct: 4 ADLAELLRNTAAAVLAERGLDAAALPATVVVERPRNPEHGDYASNLALQLGKKVGANPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + A + + S +AG GFINL L S ++++++ +G YG + + Sbjct: 64 LAGWLAAALAETDGIASAEVAGPGFINLRLEASAQAVVVTNVLDAGDRYGHSDAQSTHNI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L++ G V REYY ND GAQI+ A S+ Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGAGVVREYYFNDHGAQIDRFASSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + ++ + L+ PE + + V M Sbjct: 184 AAK------GEPTPEDGYAGSYINDIAAQVLRQAPDA-LSLPEPQLRETFRAIGVDLMFT 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I++ L D++ ED H + I L G +YE Sbjct: 237 HIKESLHEFGTDFDVYTHEDSMHT--SGRVDQAIARLRETGNIYE--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 R++ GDD DR ++KSDG Y A D+AY+ K +RGFD IY++G+DH GY Sbjct: 280 -KDGATWLRTSAFGDDKDRVVIKSDGKPAYIAGDIAYYLDKRQRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+AVAAA + A + VL+ ++V L RDG P++MSKRAG ITL +V+ +G D+ R Sbjct: 339 IARLKAVAAAFGDDPAAVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D + S ENPV+YVQYA+AR ++ R A ++ + Sbjct: 399 YSLIRSSVDTPIDIELALWSSASNENPVYYVQYAHARLSALARNAAELG-------LIPD 451 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 E E L+ L E+PRV++ A +EP+++ YL DLA +H + R P Sbjct: 452 TAHLELLSHDKEGTLLRTLGEFPRVLKTAASLREPHRVCRYLEDLAGDYHRFYDSCRVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L RL L A +I +GL I+GV +P M Sbjct: 512 QG---DEQPTDLHTARLALCQATRQVIANGLAILGVTAPERM 550 >gi|164685833|ref|ZP_01945807.2| arginyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177'] gi|164601349|gb|EAX33686.2| arginyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177'] Length = 586 Score = 552 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 209/615 (33%), Positives = 321/615 (52%), Gaps = 61/615 (9%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + L ++ + K ++ ++ I I D HG +TN A+ LS+ G+ P Sbjct: 1 MKQQIETLLNQAIERLKTKGVLKPEVTPVIKITHTTDPQHGDFATNLALTLSKAAGMSPH 60 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +AE IV + + V IAG GFIN +++ + ++SSI+ +G +YGR+ +GKG + Sbjct: 61 ALAEKIVEALPPSGQITEVEIAGPGFINFFVTEGSYQTVVSSILKAGKDYGRSEMGKGQR 120 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V++E+VSANPTGP+HVGH R A G +A+L+ +G+EV REYY+NDAG Q+ LALSV+ Sbjct: 121 VHMEYVSANPTGPLHVGHGRGAAYGACVANLLNAAGFEVHREYYVNDAGRQMGILALSVW 180 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL--------LNFPEE------- 227 RY Q Y +LP+ Y G Y+ + + L KY + PEE Sbjct: 181 VRYLQG-YEASIELPKNAYQGEYIIDIAEALKAKYGKQFYHSVESIQAKIPEEIDSNADP 239 Query: 228 -----------------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K V ++ +++ I++DL+ ++ +D + E R Sbjct: 240 EAYLDAWVTAQKDLLGPKDFECVFQAALDSILNDIKNDLEEFSVTYDDWFPESRLVR--E 297 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I++ +D L + GYVYE FR+T +GD+ DR L + +G Sbjct: 298 GLIQEGLDLLTKHGYVYE----------------KNGAQWFRATALGDEKDRVLFRKNGL 341 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFAAD+AY K+ +G+D +I + G+DH GY+ R+ + + ++++LL + Sbjct: 342 PTYFAADVAYHLHKFNQGYDQIIDIFGADHHGYIPRIRGFLKGLGKAPEKLHILLVQFAI 401 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 LYR + MS R G F+TLR + EVG+D+ RF + RK + LDFD K QS ENP Sbjct: 402 LYRGNEKVSMSTRGGTFVTLRELRHEVGNDAARFFYIMRKPDQHLDFDLELAKSQSNENP 461 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+Y+QYA+AR S+FRQ K + D PR + E +L+ L YP VI+ Sbjct: 462 VYYIQYAHARICSVFRQLKTTQKNWDR---PRGMENLSLLSTNHEKELLATLGRYPEVIK 518 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A + P+ LA YL LA+ FH +++ R + L RL L++AV II Sbjct: 519 RAAMNYAPHLLAHYLQTLANQFHTYYNAERF-------LIEDDNLRNARLNLINAVQQII 571 Query: 571 NSGLNIIGVESPNEM 585 +GL ++GV +P EM Sbjct: 572 RNGLTLLGVSAPEEM 586 >gi|297545501|ref|YP_003677803.1| arginyl-tRNA synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296843276|gb|ADH61792.1| arginyl-tRNA synthetase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 561 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 201/590 (34%), Positives = 325/590 (55%), Gaps = 37/590 (6%) Query: 2 YLFADFSSRLKN----YLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL 57 + +K+ +K + + + + I IE P++ HG L+ N AMI+++ Sbjct: 3 NIIQKVKDEIKDMVTTAIKNSVKEGLINIESIPEIEIEEPKEKQHGDLAINTAMIMAKQA 62 Query: 58 GLDPLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116 + P IAE+IV+++ + ++ + +AG GFIN +L+ +L + L + G +YGR Sbjct: 63 KMSPKKIAEIIVSKMDTSNTFIEKIEVAGPGFINFFLNDKFLEETLKLVYKRGKDYGRVN 122 Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176 IGKG KV +EFVSANPTGPMH+G+ R +GD LAS++ ++GY+VTRE+YINDAG QI Sbjct: 123 IGKGKKVQVEFVSANPTGPMHMGNARGGALGDALASVLDYAGYDVTREFYINDAGNQIEK 182 Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236 S+ RY Q L +++PEG Y G + +E + Y + + P E+ + +Y Sbjct: 183 FGYSLEARYLQLL-GIPAEVPEGGYHGEDIIDRAREFLEIYGDKYKDAPSEERRKALVEY 241 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 ++ ++ I++DL+ I++D++ SE + D + +I+ L ++GY YE Sbjct: 242 GLKKNLEKIKEDLELYGIEYDVWFSEQSLY--DSGEVYKVIEELKQKGYTYE-------- 291 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355 L F+ T+ G + D L++++G TY A+D+AY K K+ RGFD +I V Sbjct: 292 --------KDGALWFKMTLFGAEKDDVLVRANGFPTYLASDIAYHKNKFITRGFDWVINV 343 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 G+DH G++ ++ A+ +++V+L +LV+L G +KMSKR G +TLR ++D Sbjct: 344 WGADHHGHIAPMKGAMQALGIDPDRLDVVLMQLVKLIEGGQVVKMSKRTGRMVTLRDLID 403 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 EVG D+ RF R +DFD KEQS ENPVFYVQYA+AR SI RQ ++ Sbjct: 404 EVGKDAARFFFNMRSADSPIDFDLDLAKEQSNENPVFYVQYAHARICSIIRQLEEKVKIE 463 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 + D +++ +E E LI LA +P I A P+++ Y+ D+AS+FH Sbjct: 464 NIDEVDLSLLKEE-----EEKDLIKKLAYFPEEITIAARTLTPHRITRYVLDVASLFHSF 518 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ R V+ L R L+ AV ++I + L+I+ + +P M Sbjct: 519 YNSHR-------VKGVEENLMKARFVLILAVKTVIKNALDILKITAPERM 561 >gi|289523473|ref|ZP_06440327.1| arginine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503165|gb|EFD24329.1| arginine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 558 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 205/565 (36%), Positives = 315/565 (55%), Gaps = 34/565 (6%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILD----RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 D S +K+ L + ++ ++ I+IERPR G +TN AM+++R + P Sbjct: 3 DVESHIKDLLNDAIISTAKDENLVYPEGLEIIIERPRRENQGDYATNVAMLMARNWEMKP 62 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 IA++I++ +K V+ V +AG GFIN +LS ++ +++ I+ G +YG+ +G+G Sbjct: 63 RDIAQVIISHLKKSEYVEKVEVAGPGFINFFLSDLWMSELIREIIDKGEDYGKRDLGEGK 122 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 + +EFVSANPTGP+H+GH R A VGD +A++++F+G+ V REYYINDAG Q+ L SV Sbjct: 123 RAQVEFVSANPTGPLHIGHGRGAAVGDVMANILSFAGWYVEREYYINDAGLQMKLLGRSV 182 Query: 182 FWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 RY + L +++ PE Y G Y+ + +E+ D + L P E+ L KDY+V+ Sbjct: 183 QARYFELLGRSEAAPFPEDGYKGDYIHEIAQEIIDIEGDKFLGLPIEETLDYFKDYAVKV 242 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 ++ I+ DL+ + D++ SE H + IR+++D L ++G YE Sbjct: 243 ILNGIKKDLEDFRVLFDVWFSEKTLH--ERGLIREMVDFLMKRGLAYE------------ 288 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + +RST GD+ DR L++S+G TYFA+D+AY K K++RGFD +I V G+DH Sbjct: 289 ----KEGAIWYRSTKFGDEKDRVLIRSNGEPTYFASDVAYHKDKFDRGFDLVIDVWGADH 344 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GYV R++A A+ + VLL + V L + G + MS RAG+F+TLR ++DEVG D Sbjct: 345 HGYVPRMKAAVQALGRSPDDLQVLLIQFVSLIKQGRMVSMSTRAGEFVTLREMMDEVGVD 404 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 ++R+ L RK LDFD K S +NPV+YVQYA AR SIF++A +L Sbjct: 405 AMRYFFLMRKCDSHLDFDIDLAKSASTDNPVYYVQYASARLHSIFKEASSRG----IELP 460 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 + E LI L ++P + A P+ + FY Y+LA FH ++ R Sbjct: 461 APEKVDISLLKTEEEKALIKCLGKFPEEVAKAAKELSPHLIVFYAYELAKAFHSFYNAHR 520 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHA 565 V + L+ RL LV A Sbjct: 521 -------VLGEEKSLSDARLILVRA 538 >gi|322382230|ref|ZP_08056143.1| arginyl-tRNA synthetase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153811|gb|EFX46179.1| arginyl-tRNA synthetase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 555 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 206/585 (35%), Positives = 319/585 (54%), Gaps = 32/585 (5%) Query: 3 LFADFSSRLKNYLK-EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 + + + +K + + V+ + L + +E P+D AHG +TN AM L+R +P Sbjct: 1 MLNEVKTSVKKAIADAVVSAGIVDIEQLPAVTLEVPKDKAHGDFATNIAMQLTRIAKQNP 60 Query: 62 LTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 IAE ++A + + D V IAG GFIN ++ SYL +++ ++ G YG+ +GKG Sbjct: 61 RQIAEKLIAHLDKEAAYIDEVEIAGPGFINFRMNKSYLYQVIGQVLEQGNSYGKINMGKG 120 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +V +EFVSANPTG +H+GH R A VGD L +++ +G EVTREYYINDAG Q+ LA S Sbjct: 121 KRVQVEFVSANPTGSLHLGHARGAAVGDALCNVLEMAGCEVTREYYINDAGNQVLNLAKS 180 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 + RY+QAL ++++PE Y G +K +ELA LL +E+ L + Y ++ Sbjct: 181 IEARYRQAL-GQEAEMPEDGYYGEDIKGFAEELAKAEGDRLLALNDEERLVFFRKYGLEK 239 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 + I+ DL ++ D + SE + + I D++ L G+V+E Sbjct: 240 ELDKIKRDLGRFGVKFDEWFSETSIYENNM--IDDVLKQLKDNGHVFE------------ 285 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 R+T GDD DR L+K+DG+YTY D+AY + KYERG+D +I + G+DH Sbjct: 286 ----QDGATWLRTTDYGDDKDRVLIKNDGTYTYLTPDVAYHRNKYERGYDEIINIWGADH 341 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY+ R++A A+ ++ VL+ ++V L+++G +KMSKR G +T+ ++DEVG D Sbjct: 342 HGYIPRMKAAVTALGYDANKLTVLIAQMVSLFQNGEKVKMSKRTGKAVTMEDLMDEVGVD 401 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 ++R+ R LDFD +S ENPVFYVQYA+AR SIFRQA++ + Sbjct: 402 AIRYFFTMRSMDSHLDFDMDLAISKSNENPVFYVQYAHARICSIFRQAEEQG----ISML 457 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 P +E L+ +AE P + A P++L Y+Y+LAS FH ++ R Sbjct: 458 PAGQADLSRLTAEAEFDLLRKMAELPEEVAIAAEQYAPHRLIRYVYELASQFHSYYKAER 517 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V ++ T RL L+ A+ ++ + L +GV P M Sbjct: 518 -------VITDDAAQTQARLALLAALRVVLRNVLAAVGVSVPERM 555 >gi|119505532|ref|ZP_01627604.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2080] gi|119458641|gb|EAW39744.1| arginyl-tRNA synthetase [marine gamma proteobacterium HTCC2080] Length = 564 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 190/592 (32%), Positives = 309/592 (52%), Gaps = 35/592 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + +S L + + K +V + ++ +D +HG L+TN AM+LS+ G Sbjct: 1 MIMKEALTSLLVQAVSTLIAKGQVPEVPDLVPQVDHTKDASHGDLATNLAMVLSKKAGKA 60 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A I+ + + + IAG GFIN +L+ + +++ SI+ SG ++G + G G Sbjct: 61 PRDLAAAIIEALPTNDLISKTEIAGPGFINFFLNQASNVEVIRSILNSGPKFGTSDKGAG 120 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 + +EFVSANPTGP+HVGH R A +GD+L+ L+ +G+ V RE+Y NDAG QI LA S Sbjct: 121 RRAQVEFVSANPTGPLHVGHGRGAAIGDSLSRLLEATGWSVHREFYYNDAGQQIANLARS 180 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK-----YSSELLNFPEEKWLPIVKD 235 V R Q L D D PE Y G Y+ + +K + + L ++D Sbjct: 181 VQAR-AQGLTPEDPDWPEDGYRGTYIVDLATAYQNKITVSAADRTITALGDVDNLAAIRD 239 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 ++V + + DLKA +Q D + E + + + D + L R G+ YE Sbjct: 240 FAVAWLRREQDLDLKAFGVQFDEYFLESALY--ESGEVTDTVTALERAGHTYE------- 290 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 + L R++ GDD DR + K G YTYF D+AY K++RGF+ +I Sbjct: 291 ---------EGGALWLRTSDFGDDKDRVMRKKGGEYTYFVPDVAYHFNKWQRGFERVINE 341 Query: 356 MGSDHSGYVKRLEAVAAAVSEK--KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 G+DH + R+ A +++ + +L ++V + RDG +K+SKRAG ++TLR + Sbjct: 342 QGADHHSTITRVRAGLQGLAKDIPEGWPEYVLHQMVTVMRDGTEVKLSKRAGSYVTLRDL 401 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 ++ VG D+ RF + R S L FD QS ENPVFY+QYA+AR S+ R+A Sbjct: 402 IEWVGKDATRFFLAARSASSQLTFDIDLALAQSNENPVFYIQYAHARVCSVKRKALSEGS 461 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 D + ++ + EL L + LA++P ++ +A EP+ +A YL ++A+ FH Sbjct: 462 DW---TPQAGLDHLDTLTSSEELALALLLAKFPEIVASAAQRLEPHDIANYLREVAAAFH 518 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G ++ + + +N+ ++ R+ L A +I +GL+++GV +P M Sbjct: 519 GLYNAH------KLIDEDNKNQSLGRISLAEATRQVIANGLDLLGVSAPESM 564 >gi|303230487|ref|ZP_07317246.1| arginine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6] gi|302514853|gb|EFL56836.1| arginine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6] Length = 577 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 198/607 (32%), Positives = 308/607 (50%), Gaps = 52/607 (8%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + S ++ L+E + IV+E P G STN AM +R + Sbjct: 1 MDMKEILKSGIEQALQETINSGGLPAGEYPEIVLEVPPQKEFGDFSTNIAMQSARVARQN 60 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P IAE +++ + D ++ +AG GFIN +L + L +I+ +G +YG + Sbjct: 61 PRAIAETLISHMDFD-WLERAEVAGAGFINFFLKSDMVYDTLKAILNAGDQYGVQPLRAR 119 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 + +E+VSANPTGP+HVGH R A G L +L+ +GY V EYYINDAG QI+ +A+S Sbjct: 120 DTIQVEYVSANPTGPLHVGHGRGAAYGSALVNLLRAAGYNVQSEYYINDAGNQIDNMAIS 179 Query: 181 VFWRYQQA---------LYNNDSD------------LPEGYYPGVYLKHVGKELADKYSS 219 + +R+Q+ N D PE Y G + K +A++ S Sbjct: 180 IEYRFQELQGATLVFPPKRNEDGSMPEFDIPEGALVFPENGYRGPDIIETAKAIAEREGS 239 Query: 220 ELLN-FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 + LN E + + K+ ++ + + + L + D + SE H + I ++ Sbjct: 240 DTLNAMNEADRVALFKEEGLKEKLARLEETLSNFRVTFDNWFSERTVH--EADEIHHSVE 297 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 L G VYE L +ST GDD DR +++ +G TY AAD+ Sbjct: 298 ALKALGKVYE----------------KDGALWLKSTDYGDDKDRVVIRDNGVPTYLAADI 341 Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 AY + KY+RGF MI + G+DH GYV R++A AA ++ VLL ++V L+RDG + Sbjct: 342 AYHRNKYDRGFKEMIDIWGADHHGYVCRVKAAMAAFGYDPDKLTVLLLQMVALFRDGQLV 401 Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 K+SKR+GD +TL +++EVG D+ R+ L R LDFD K +S +NPV+Y+QYA+ Sbjct: 402 KLSKRSGDSVTLDELIEEVGVDASRYFFLMRSLDSQLDFDINLAKSRSNDNPVYYIQYAH 461 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 AR SI+ Q ++ + + EL+LI LAEYP + + + P Sbjct: 462 ARIHSIYNQVREAG----IAFGDYSETDFTTLTSEMELELIKKLAEYPEEVVQSAEHRAP 517 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 +++A YL+DLAS+FH + GR + + L RL L+ A+A ++ GL I+G Sbjct: 518 HRIARYLFDLASMFHSFYRQGR-------IIGVDPSLQQARLGLITAIALVLRQGLGILG 570 Query: 579 VESPNEM 585 + +P +M Sbjct: 571 ISAPEKM 577 >gi|313202467|ref|YP_004041125.1| arginyl-tRNA synthetase [Methylovorus sp. MP688] gi|312441783|gb|ADQ85889.1| arginyl-tRNA synthetase [Methylovorus sp. MP688] Length = 552 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 189/586 (32%), Positives = 295/586 (50%), Gaps = 41/586 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + L L + + V+ L I +ERP+ HG +TN AM+L++PL +P IAE Sbjct: 1 MKAHLTELLTQAAKSLGVDSASLS-IQLERPKSADHGDFATNLAMMLAKPLRQNPRAIAE 59 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 ++ + V V IAG GFIN +L+ +++ I G +G N G+ KV +E Sbjct: 60 SLIQALPASEYVAKVEIAGAGFINFFLNGQARHGVIAQIREQGERFGHNNAGQQRKVQVE 119 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+HVGH R A VGD LA L+A +G++VTRE+Y NDAGAQI+ L SV R Sbjct: 120 FVSANPTGPLHVGHGRGAAVGDCLARLLAANGWDVTREFYYNDAGAQIDNLTKSVHAR-A 178 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGK-----ELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 Q L PE Y G Y+ + K E ++ + L ++ ++V + Sbjct: 179 QGLTPEHPTFPEEGYRGEYIIDIAKAYLAGETVVADDQQVTASGDVNDLESIRRFAVAYL 238 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 DL+A I+ D+F E + + + L G+ YE Sbjct: 239 RHEQDLDLQAFQIKFDVFSLESSLYT--EGKVESTVQALINSGHTYE------------- 283 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 L ++T GDD DR + K +G YTYF D+AY K++RGF+ +I G+DH Sbjct: 284 ---QDDALWLKTTDFGDDKDRVMRKREGGYTYFVPDVAYHVEKWKRGFERVINEQGADHH 340 Query: 362 GYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 + R+ A A+ + + +L ++V + R G +K+SKRAG ++TLR +++EVG Sbjct: 341 STITRVRAGLQALDIGIPQGWPDYVLHQMVTVMRGGEEVKLSKRAGSYVTLRDLIEEVGC 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R+ L FD + Q+ +NPV+Y+QYA+AR S+ Q L Sbjct: 401 DATRYFLAARRADSQLVFDIDLARAQTNDNPVYYIQYAHARICSVLGQWGGDESSLVGAD 460 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 R P E L+ L E+ V++NA P+ +A YL +LAS H +++ Sbjct: 461 LSRLDAPH-------EAALLQRLDEFSDVVKNAADELAPHMVANYLKELASDLHSYYNAQ 513 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + L + R+ L+ A ++ +GL+++GV +P +M Sbjct: 514 QF-------LVEDSALKLARMALISATRQVLKNGLDLLGVSAPEKM 552 >gi|209364278|ref|YP_001425414.2| arginyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111] gi|254783049|sp|A9KH27|SYR_COXBN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|207082211|gb|ABS77583.2| arginyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111] Length = 592 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 209/615 (33%), Positives = 321/615 (52%), Gaps = 61/615 (9%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + L ++ + K ++ ++ I I D HG +TN A+ LS+ G+ P Sbjct: 7 MKQQIETLLNQAIERLKTKGVLKPEVTPVIKITHTTDPQHGDFATNLALTLSKAAGMRPH 66 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +AE IV + + V IAG GFIN +++ + ++SSI+ +G +YGR+ +GKG + Sbjct: 67 ALAEKIVEALPPSGQITEVEIAGPGFINFFVTEGSYQTVVSSILKAGKDYGRSEMGKGQR 126 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V++E+VSANPTGP+HVGH R A G +A+L+ +G+EV REYY+NDAG Q+ LALSV+ Sbjct: 127 VHMEYVSANPTGPLHVGHGRGAAYGACVANLLNAAGFEVHREYYVNDAGRQMGILALSVW 186 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL--------LNFPEE------- 227 RY Q Y +LP+ Y G Y+ + + L KY + PEE Sbjct: 187 VRYLQG-YEASIELPKNAYQGEYIIDIAEALKAKYGKQFYHSVESIQAKIPEEIDSNADP 245 Query: 228 -----------------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K V ++ +++ I++DL+ + +D + E R Sbjct: 246 EAYLDAWVTAQKDLLGPKDFECVFQAALDSILNDIKNDLEEFGVTYDDWFPESRLVR--E 303 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I++ +D L + GYVYE FR+T +GD+ DR L++ +G Sbjct: 304 GLIQEGLDLLTKHGYVYE----------------KNGAQWFRATALGDEKDRVLIRKNGL 347 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFAAD+AY K+ +G+D +I + G+DH GY+ R+ + + ++++LL + Sbjct: 348 PTYFAADVAYHLHKFNQGYDQIIDIFGADHHGYIPRIRGFLKGLGKAPEKLHILLVQFAI 407 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 LYR + MS R G F+TLR + EVG+D+ RF + RK + LDFD K QS ENP Sbjct: 408 LYRGNEKVSMSTRGGTFVTLRELRHEVGNDAARFFYIMRKPDQHLDFDLELAKSQSNENP 467 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+Y+QYA+AR S+FRQ K + D PR + E +L+ L YP VI+ Sbjct: 468 VYYIQYAHARICSVFRQLKTTQKNWDR---PRGMENLSLLSTNYEKELLATLGRYPEVIK 524 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A + P+ LA YL LA+ FH +++ R + L RL L++AV II Sbjct: 525 RAAMNYAPHLLAHYLQTLANQFHTYYNAERF-------LIEDDNLRNARLNLINAVQQII 577 Query: 571 NSGLNIIGVESPNEM 585 +GL ++GV +P EM Sbjct: 578 RNGLTLLGVSAPEEM 592 >gi|304315735|ref|YP_003850880.1| arginyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777237|gb|ADL67796.1| arginyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 562 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 200/583 (34%), Positives = 320/583 (54%), Gaps = 32/583 (5%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 ++ + + N +++ + + + I IE P++ G LS N AM++++ + P I Sbjct: 10 SEITEIVTNSIEKAIKSGLLNIEDMPSIEIEEPKEKQFGDLSINTAMVMAKSAKMPPRKI 69 Query: 65 AELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 AE+I +K+ +D V IAG GF+N YLS Y + L I G +YGR IG G KV Sbjct: 70 AEIIKDGLKLKGTLIDKVEIAGPGFMNFYLSEDYKVEALKLIKRKGSDYGRVNIGNGKKV 129 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EFVSANPTGPMH+G+ R +GD L+S++ ++GY+VTRE+YINDAG QI LS+ Sbjct: 130 QVEFVSANPTGPMHMGNARGGALGDALSSILDYAGYDVTREFYINDAGNQIEKFGLSLEA 189 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 RY + L +++PEG Y G + KE + Y + + E + Y ++ ++ Sbjct: 190 RYLELL-GEHAEVPEGGYHGDDIIERAKEFLELYGDKYKDAAPEDRRKALVQYGLKKNIE 248 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 +++DL+A I++D++ SE+ H + + +ID L +GY YE Sbjct: 249 KLKEDLEAYGIEYDVWFSENTLH--ESGEVESVIDELKEKGYTYE--------------- 291 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSG 362 L F+ T+ G + D L++++G TY A+D+AY K K+ +RGFD +I + G+DH G Sbjct: 292 -KDGALWFKETLFGAEKDDVLVRANGYPTYLASDIAYHKNKFVKRGFDWVIDIWGADHHG 350 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 +V ++ A+ +++VLL +LVRL + +KMSKR G +TLR ++DEVG D+ Sbjct: 351 HVAPMKGAMKALGIDPDKLDVLLMQLVRLMKGKEVVKMSKRTGKMVTLRDLIDEVGKDAA 410 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 RF R +DFD EQS ENPVFYVQYA+AR SI RQ KD + D Sbjct: 411 RFFFNMRSADSAVDFDMDLAVEQSNENPVFYVQYAHARICSIIRQLKDDGINTD----DL 466 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 + + +E+ LI LA P + A P+++ Y+ D+AS+FH ++ R Sbjct: 467 KDVDLNLLNEEAEIDLIKKLAYLPEEVTIAAKTMAPHRITRYILDVASLFHTFYNSCR-- 524 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V+ + +L R+ L+ + +I + L+++ + +P +M Sbjct: 525 -----VRGVDEELMKARIVLIDSTRIVIKNVLDMLKITAPEKM 562 >gi|254000508|ref|YP_003052571.1| arginyl-tRNA synthetase [Methylovorus sp. SIP3-4] gi|253987187|gb|ACT52044.1| arginyl-tRNA synthetase [Methylovorus sp. SIP3-4] Length = 552 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 189/586 (32%), Positives = 295/586 (50%), Gaps = 41/586 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + L L + + V+ L I +ERP+ HG +TN AM+L++PL +P IAE Sbjct: 1 MKAHLTELLTQAAKSLGVDSASLS-IQLERPKSADHGDFATNLAMMLAKPLRQNPRAIAE 59 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 ++ + V V IAG GFIN +L+ +++ I G +G N G+ KV +E Sbjct: 60 SLIQALPASEYVAKVEIAGAGFINFFLNGQARHGVIAQIREQGDRFGHNNAGQQRKVQVE 119 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+HVGH R A VGD LA L+A +G++VTRE+Y NDAGAQI+ L SV R Sbjct: 120 FVSANPTGPLHVGHGRGAAVGDCLARLLAANGWDVTREFYYNDAGAQIDNLTKSVHAR-A 178 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGK-----ELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 Q L PE Y G Y+ + K E ++ + L ++ ++V + Sbjct: 179 QGLTPEHPTFPEEGYRGEYIIDIAKAYLAGETVVADDQQVTASGDVNDLESIRRFAVAYL 238 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 DL+A I+ D+F E + + + L G+ YE Sbjct: 239 RHEQDLDLQAFQIKFDVFSLESSLYT--EGKVESTVQALINSGHTYE------------- 283 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 L ++T GDD DR + K +G YTYF D+AY K++RGF+ +I G+DH Sbjct: 284 ---QDDALWLKTTDFGDDKDRVMRKREGGYTYFVPDVAYHVEKWKRGFERVINEQGADHH 340 Query: 362 GYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 + R+ A A+ + + +L ++V + R G +K+SKRAG ++TLR +++EVG Sbjct: 341 STITRVRAGLQALDIGIPQGWPDYVLHQMVTVMRGGEEVKLSKRAGSYVTLRDLIEEVGC 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + R+ L FD + Q+ +NPV+Y+QYA+AR S+ Q L Sbjct: 401 DATRYFLAARRADSQLVFDIDLARAQTNDNPVYYIQYAHARICSVLGQWGGDESSLVGAD 460 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 R P E L+ L E+ V++NA P+ +A YL +LAS H +++ Sbjct: 461 LSRLDAPH-------EAALLQRLDEFSDVVKNAADELAPHMVANYLKELASDLHSYYNAQ 513 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + L + R+ L+ A ++ +GL+++GV +P +M Sbjct: 514 QF-------LVEDSALKLARMALISATRQVLKNGLDLLGVSAPEKM 552 >gi|257092605|ref|YP_003166246.1| arginyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045129|gb|ACV34317.1| arginyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 590 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 205/622 (32%), Positives = 305/622 (49%), Gaps = 77/622 (12%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D S L + ++ + + I IERP+ AHG S N AM L+R L +P +A Sbjct: 4 DLKSHLADLMRVALHSVA-PAEADTTIHIERPKQAAHGDFSCNLAMQLARSLKRNPRQLA 62 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 EL+++ + P V IAG GFIN +L P+ +++ ++ ++GR+ G KV + Sbjct: 63 ELLLSELPPSPWVSKAEIAGAGFINFHLPPTAKIQVVRDVLEQAEDFGRSTSGGRRKVLV 122 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+HVGH R A G +L L+AF+G++VT EYY+NDAG Q++ LALS + RY Sbjct: 123 EFVSANPTGPLHVGHGRGAAYGGSLCKLLAFAGWDVTSEYYVNDAGRQMDILALSTWLRY 182 Query: 186 QQALYNNDSD--LPEGYYPGVYLKHVGKELADKYSSEL---------------------- 221 + + P Y G Y++ + +L + Sbjct: 183 LELCSGEGTPSLFPPNAYQGDYVRAMASQLLTAHGERYRRTASDVLAGTPGLPGAERTDA 242 Query: 222 -----------------LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 + E+W V D+ + + R DL+ + D++ SE Sbjct: 243 EAAQQREAQLDALIVNAKHLLGEEWQY-VHDFVLTEQLADCRGDLEESGVHFDVWFSEQS 301 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 + ++ L + G++Y + FRST GD+ DR + Sbjct: 302 LFA--TGMVARCVERLEKGGHLY----------------VQDGARWFRSTTFGDEKDRVI 343 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 + +G YTYFA+D+AY KYERGF +I V G+DH GY+ R++ +A+ + V Sbjct: 344 QRDNGFYTYFASDIAYHLNKYERGFQRIINVWGADHHGYIPRVKGAVSALGLDPEVLEVA 403 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L + LYR G MS R+GDF+TLR + EVG+D+ RF + RK+ + LDFD K Sbjct: 404 LVQFAVLYRSGCKASMSTRSGDFVTLRTLRAEVGNDACRFFYVLRKSDQHLDFDLDLAKS 463 Query: 445 QSKENPVFYVQYAYARCRSIFR-QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503 QS +NPVFYVQYA+AR RS+ A + DL P EL L L Sbjct: 464 QSNDNPVFYVQYAHARVRSLLALWAGEPQVLAGADLDPLG--------SARELALAARLG 515 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 E+P V+E A P+ +AFYL DLA+ FH H++ R + ++ + R+ L Sbjct: 516 EFPEVVEAAAGELAPHLIAFYLRDLAAEFHSHYNAER-------ILVDDPAIRDARIALA 568 Query: 564 HAVASIINSGLNIIGVESPNEM 585 AV +I +G+ I+GV P M Sbjct: 569 AAVGQVIRNGMAILGVSCPESM 590 >gi|165918171|ref|ZP_02218257.1| arginyl-tRNA synthetase [Coxiella burnetii RSA 334] gi|165918031|gb|EDR36635.1| arginyl-tRNA synthetase [Coxiella burnetii RSA 334] Length = 586 Score = 551 bits (1421), Expect = e-155, Method: Composition-based stats. Identities = 209/615 (33%), Positives = 322/615 (52%), Gaps = 61/615 (9%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + L ++ + K ++ ++ I I D HG +TN A+ LS+ G+ P Sbjct: 1 MKQQIETLLNQAIERLKTKGVLKPEVTPVIKITHTTDPQHGDFATNLALTLSKAAGMSPH 60 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +AE IV + + V IAG GFIN +++ + ++SSI+ +G +YGR+ +GKG + Sbjct: 61 ALAEKIVEALPPSGQITEVEIAGPGFINFFVTEGSYQTVVSSILKAGKDYGRSEMGKGQR 120 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V++E+VSANPTGP+HVGH R A G +A+L+ +G+EV REYY+NDAG Q+ LALSV+ Sbjct: 121 VHMEYVSANPTGPLHVGHGRGAAYGACVANLLNAAGFEVHREYYVNDAGRQMGILALSVW 180 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL--------LNFPEE------- 227 RY Q Y +LP+ Y G Y+ + + L KY + PEE Sbjct: 181 VRYLQG-YEASIELPKNAYQGEYIIDIAEALKAKYGKQFYHSVESIQAKIPEEIDSNADP 239 Query: 228 -----------------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 K V ++ +++ I++DL+ ++ +D + E R Sbjct: 240 EAYLDAWVTAQKDLLGPKDFECVFQAALDSILNDIKNDLEEFSVTYDDWFPESRLVR--E 297 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I++ +D L + GYVYE + FR+T +GD+ DR L + +G Sbjct: 298 GLIQEGLDLLTKHGYVYE----------------KNRAQWFRATALGDEKDRVLFRKNGL 341 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFAAD+AY K+ +G+D +I + G+DH GY+ R+ + + ++++LL + Sbjct: 342 PTYFAADVAYHLHKFNQGYDQIIDIFGADHHGYIPRIRGFLKGLGKAPEKLHILLVQFAI 401 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 LYR + MS R G F+TLR + EVG+D+ RF + RK + LDFD K QS ENP Sbjct: 402 LYRGNEKVSMSTRGGTFVTLRELRHEVGNDAARFFYIMRKPDQHLDFDLELAKSQSNENP 461 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+Y+QYA+AR S+FRQ K + D PR + E +L+ L YP VI+ Sbjct: 462 VYYIQYAHARICSVFRQLKTTQKNWDR---PRGMENLSLLSTNHEKELLATLGRYPEVIK 518 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A + P+ LA YL LA+ FH +++ R + L RL L++AV II Sbjct: 519 RAAMNYAPHLLAHYLQTLANQFHTYYNAERF-------LIEDDNLRNARLNLINAVQQII 571 Query: 571 NSGLNIIGVESPNEM 585 +GL ++GV +P EM Sbjct: 572 RNGLTLLGVSAPEEM 586 >gi|296138955|ref|YP_003646198.1| arginyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162] gi|296027089|gb|ADG77859.1| arginyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162] Length = 550 Score = 551 bits (1421), Expect = e-154, Method: Composition-based stats. Identities = 187/582 (32%), Positives = 295/582 (50%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD S L + + ++ +L +R+ +ERPR+ HG +TN AM +++ G++P Sbjct: 4 ADLSELLHATATTVLTERGLDVSVLPERVTVERPRNPEHGDYATNLAMQVAKKAGVNPRD 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + +D IAG GF+N+ L+ +++ SI+ +G + Sbjct: 64 LATWLAEALASADGIDEATIAGPGFLNIRLAADAQNQLVVSILEQKDAFGHGSTLADQVI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++ G EVTREYY ND GAQI+ A S+ Sbjct: 124 NLEFVSANPTGPVHLGGARWAAVGDSLGRVLEAQGAEVTREYYFNDHGAQIDRFARSLDA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 P+ Y G Y+ + + + +L+ P+ + + + V+ M Sbjct: 184 AA------TGKPTPDDGYAGDYIGEIAATVVQNH-PGILDLPDAERVEAFRADGVELMFD 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L +F ED+ + +D L QG +YE Sbjct: 237 HIKRTLHEFGTDFAVFTHEDEMF--SSGLVEQSVDQLKAQGNLYE--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 +ST GDD DR ++KSDG+ Y A D+AY K K++RGF IY++G+DH GY Sbjct: 280 -KDGAWWLKSTDFGDDKDRVVIKSDGNAAYIAGDIAYLKHKFDRGFTLAIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA+ A++ VL+ +LV L +DG P++MSKRAG ITL +VD VG D+ R Sbjct: 339 IGRLKAAAAAMGYDPARVEVLIGQLVNLVKDGKPVRMSKRAGTVITLDDLVDAVGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D + + S ENPV+YVQYA+AR +I R A ++ + + Sbjct: 399 YSLIRSSVDTSIDLDLDLLTQASNENPVYYVQYAHARLSAIARSAAELGIEGSTEHLGL- 457 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + E L+ L E+P V A +EP+++A YL +LA +H +S R P Sbjct: 458 ------LDNPREGDLVRTLGEFPGVAAAAASLREPHRVARYLEELAGAYHRFYSECRVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L R+ L A ++ +GL+++GV +P+ M Sbjct: 512 ---LGDEEPTDLHRARVALCAATRQVLANGLSLVGVSAPDRM 550 >gi|311743944|ref|ZP_07717750.1| arginine--tRNA ligase [Aeromicrobium marinum DSM 15272] gi|311313074|gb|EFQ82985.1| arginine--tRNA ligase [Aeromicrobium marinum DSM 15272] Length = 554 Score = 551 bits (1421), Expect = e-154, Method: Composition-based stats. Identities = 178/583 (30%), Positives = 296/583 (50%), Gaps = 36/583 (6%) Query: 6 DFSSRLKNYLKEIDCKI--KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 S + L + + + D +++ERP+ HG +TN A+ L++ G++P Sbjct: 5 QLSDAIVGALASLVEAGVLNLPGGVPDTVLVERPKVREHGDYATNIALRLAKQAGVNPRE 64 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A+ + + V + IAG GF+N+ ++ + + ++ +G YG + G ++ Sbjct: 65 LAQHLADALVGHDGVAAAEIAGPGFLNIRVAAGAQGTVAADVLTAGDAYGSGDLYAGQRI 124 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L ++ G EVTREYY ND GAQI+ A S+ Sbjct: 125 NLEFVSANPTGPIHIGGVRWAAVGDCLGRILTAVGGEVTREYYFNDHGAQIDRFARSLLA 184 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + +++ + + P+++ + + V+ M Sbjct: 185 SARGQAA------PEDGYGGQYIHDIARDVVAVH-PGAADLPDDEATEVFRAAGVEQMFG 237 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L + D++ E+D H + + I L G +Y+ Sbjct: 238 EIKASLHDFGVDFDVYFHENDLH--ESGAVDRAIARLTELGKMYQS-------------- 281 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 R++ GDD DR ++KSDG Y + DLAY+ K ERGFD + ++G+DH GY Sbjct: 282 --EGATWLRTSDFGDDKDRVVVKSDGEPAYISGDLAYYLDKRERGFDRCLIMLGADHHGY 339 Query: 364 VKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 V R+ A+ AA ++ + +L+ ++V L RDG P++MSKRAG ++L +V+ +G D+ Sbjct: 340 VSRMLAMCAAFGDEPGVNLELLIGQMVNLVRDGEPLRMSKRAGTVVSLEDLVEAIGVDAA 399 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 R+ + +D D + +NPV+YVQYA+AR SI R A D+ +D + F Sbjct: 400 RYALARYSTDSTIDIDLDLWAKADSDNPVYYVQYAHARLSSILRNAADLGLGVDLEGFDP 459 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 + + E +L+ LAEYPR++ A +EP+++A YL +A FH + R Sbjct: 460 GQLSTDREG-----ELLRSLAEYPRLVARAAELREPHRVARYLESVAGSFHQFYDQCRVL 514 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P+ + L RL LV A ++ +GL ++GV +P M Sbjct: 515 PQG---DEDATDLHRARLVLVAATRQVVANGLALLGVGAPERM 554 >gi|330469870|ref|YP_004407613.1| arginyl-tRNA synthetase [Verrucosispora maris AB-18-032] gi|328812841|gb|AEB47013.1| arginyl-tRNA synthetase [Verrucosispora maris AB-18-032] Length = 554 Score = 551 bits (1420), Expect = e-154, Method: Composition-based stats. Identities = 193/562 (34%), Positives = 305/562 (54%), Gaps = 35/562 (6%) Query: 26 KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAG 85 + ++ +ERPR+ HG ++ A+ LS+ +G+ P +A + A++ P + SV IAG Sbjct: 26 SALPEQTTVERPRNPDHGDYASTLALQLSKKVGVPPRELAGDLAAKLGSTPGIKSVEIAG 85 Query: 86 KGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAV 145 GF+N+ L + ++ +IV +G EYGR + G K+N+EFVSANPTGP+H+G R A Sbjct: 86 PGFLNIRLDAAAAGQLARTIVTAGEEYGRGDVLAGLKINLEFVSANPTGPVHIGGVRWAA 145 Query: 146 VGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVY 205 VGD L+ L+ +G +V EYY NDAG+QI+ A S+ + PE Y G Y Sbjct: 146 VGDALSRLLRAAGADVGTEYYFNDAGSQIDRFARSLLAAAK------GEPAPEDGYGGAY 199 Query: 206 LKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 + + E+ + E+L+ E+ + + V+ M I+ L+ ++ D + +E D Sbjct: 200 IAEIANEVTAR-RPEVLSLDEDAAQEVFRVEGVELMFAEIKSSLRDFGVEFDTYFNEKDL 258 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 H D + ++ L QG+++E R+T GDD DR L Sbjct: 259 H--DRGELEHALNRLREQGHIFEA----------------DGATWLRTTDFGDDKDRVLR 300 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVL 384 KS+G +TYFAAD AY+ K ERGFD ++ ++G+DH GY+ R++A++A + AQ + +L Sbjct: 301 KSNGEWTYFAADCAYYLDKRERGFDRVVIMLGADHHGYIGRMKAMSACFGDDPAQNLEIL 360 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 + +LV L RDG P++MSKRAG ITL +VD +G D+ R+ + + +D D Sbjct: 361 IGQLVNLVRDGAPVRMSKRAGTVITLEDLVDAIGVDASRYALARYSSDSPIDIDIELWTR 420 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDL-DFDLFPRNVIPQESEFDTSELQLIVHLA 503 +++NPV+YVQY AR S+ R A ++ D D F ++ + E +L+ LA Sbjct: 421 ATRDNPVYYVQYVAARTASVGRNAAEVGLTRGDVDAFRPELLDHD-----KENELLKALA 475 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 E+P V+ A +EP+++A YL DLA +H + + R PR L RL L Sbjct: 476 EFPAVVAAAAELREPHRVARYLEDLAGAYHRFYDNCRILPRG---DEEVTDLHRARLWLN 532 Query: 564 HAVASIINSGLNIIGVESPNEM 585 A +I +GL ++GV +P M Sbjct: 533 DATRVVIANGLRLLGVSAPERM 554 >gi|294792712|ref|ZP_06757859.1| arginine--tRNA ligase [Veillonella sp. 6_1_27] gi|294794463|ref|ZP_06759599.1| arginine--tRNA ligase [Veillonella sp. 3_1_44] gi|294454793|gb|EFG23166.1| arginine--tRNA ligase [Veillonella sp. 3_1_44] gi|294456611|gb|EFG24974.1| arginine--tRNA ligase [Veillonella sp. 6_1_27] Length = 577 Score = 551 bits (1420), Expect = e-154, Method: Composition-based stats. Identities = 198/607 (32%), Positives = 307/607 (50%), Gaps = 52/607 (8%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + S ++ L++ + IV+E P G STN AM +R + Sbjct: 1 MDMKEILKSGIEQALQDTINSGDLPAGEYPEIVLEVPPQKEFGDFSTNIAMQSARVARQN 60 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P IAE +++ + D ++ +AG GFIN +L + L +I+ +G EYG + Sbjct: 61 PRAIAEALISHMNFD-WLERAEVAGAGFINFFLKSDMVYDTLKAILNAGTEYGVQPLRAR 119 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 + +E+VSANPTGP+HVGH R A G L +L+ +GY V EYYINDAG QI+ +A+S Sbjct: 120 DTIQVEYVSANPTGPLHVGHGRGAAYGSALVNLLRAAGYNVQSEYYINDAGNQIDNMAIS 179 Query: 181 VFWRYQQA---------LYNNDSD------------LPEGYYPGVYLKHVGKELADKYS- 218 + +R+Q+ N D PE Y G + K +A++ Sbjct: 180 IEYRFQELQGATLVFPPKRNEDGSMPEFDIPEGALVFPENGYRGPDIIETAKAIAEREGF 239 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 +L E + + K+ ++ + + + L+ + D + SE H + I ++ Sbjct: 240 DKLNAMNEADRVALFKEEGLKEKLARLEETLRNFRVTFDNWFSERTVH--ESDEIHHSVE 297 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 L G VYE L +ST GDD DR +++ +G TY AAD+ Sbjct: 298 ALKALGKVYE----------------KDGALWLKSTDYGDDKDRVVIRDNGVPTYLAADI 341 Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 AY + KY+RGF MI + G+DH GYV R++A AA ++ VLL ++V L+RDG + Sbjct: 342 AYHRNKYDRGFKEMIDIWGADHHGYVCRVKAAMAAFGYDPDKLTVLLLQMVALFRDGQLV 401 Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 K+SKR+GD +TL +++EVG D+ R+ L R LDFD K +S +NPV+Y+QYA+ Sbjct: 402 KLSKRSGDSVTLDELIEEVGVDASRYFFLMRSLDSQLDFDINLAKSRSNDNPVYYIQYAH 461 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 AR SI+ Q ++ + + EL+LI LAEYP + A + P Sbjct: 462 ARIHSIYNQVREAG----IAFGNYSETDFTTLTSEMELELIKKLAEYPEEVVQAAEHRAP 517 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 +++A YLYDLAS+FH + GR + + L RL L+ A+A ++ GL I+G Sbjct: 518 HRIARYLYDLASMFHSFYRQGR-------IIGVDPALQQARLGLITAIALVLRQGLGILG 570 Query: 579 VESPNEM 585 + +P +M Sbjct: 571 ISAPEKM 577 >gi|303228773|ref|ZP_07315591.1| arginine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a] gi|302516572|gb|EFL58496.1| arginine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a] Length = 577 Score = 551 bits (1420), Expect = e-154, Method: Composition-based stats. Identities = 198/607 (32%), Positives = 307/607 (50%), Gaps = 52/607 (8%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + S ++ L+E + IV+E P G STN AM +R + Sbjct: 1 MDMKEILKSGIEQALQETINSGGLPAGEYPEIVLEVPPQKEFGDFSTNIAMQSARVARQN 60 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P IAE +++ + D ++ +AG GFIN +L + L +I+ +G +YG + Sbjct: 61 PRAIAETLISHMDFD-WLERAEVAGAGFINFFLKSDMVYDTLKAILNAGDQYGVQPLRAR 119 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 + +E+VSANPTGP+HVGH R A G L +L+ +GY V EYYINDAG QI+ +A+S Sbjct: 120 DTIQVEYVSANPTGPLHVGHGRGAAYGSALVNLLRAAGYNVQSEYYINDAGNQIDNMAIS 179 Query: 181 VFWRYQQA---------LYNNDSD------------LPEGYYPGVYLKHVGKELADKYSS 219 + +R+Q+ N D PE Y G + K +A++ Sbjct: 180 IEYRFQELQGATLVFPPKRNEDGSMPEFDIPEGALVFPENGYRGPDIIETAKAIAEREGF 239 Query: 220 ELLN-FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 + LN E + + K+ ++ + + + L + D + SE H + I ++ Sbjct: 240 DTLNAMNEADRVALFKEEGLKEKLARLEETLSNFRVTFDNWFSERTVH--ETDEIHHSVE 297 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 L G VYE L +ST GDD DR +++ +G TY AAD+ Sbjct: 298 ALKALGKVYE----------------KNGALWLKSTDYGDDKDRVVIRDNGVPTYLAADI 341 Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 AY + KY+RGF MI + G+DH GYV R++A AA ++ VLL ++V L+RDG + Sbjct: 342 AYHRNKYDRGFKEMIDIWGADHHGYVCRVKAAMAAFGYDPDKLTVLLLQMVALFRDGQLV 401 Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 K+SKR+GD +TL +++EVG D+ R+ L R LDFD K +S +NPV+Y+QYA+ Sbjct: 402 KLSKRSGDSVTLDELIEEVGVDASRYFFLMRSLDSQLDFDINLAKSRSNDNPVYYIQYAH 461 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 AR SI+ Q ++ + + EL+LI LAEYP + + + P Sbjct: 462 ARIHSIYNQVREAG----IAFGDYSETDFTTLTSEMELELIKKLAEYPEEVVQSAEHRAP 517 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 +++A YLYDLAS+FH + GR + + L RL L+ A+A ++ GL I+G Sbjct: 518 HRIARYLYDLASMFHSFYRQGR-------IIGVDPSLQQARLGLITAIALVLRQGLGILG 570 Query: 579 VESPNEM 585 + +P +M Sbjct: 571 ISAPEKM 577 >gi|169628524|ref|YP_001702173.1| arginyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977] gi|238688923|sp|B1MLU2|SYR_MYCA9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|169240491|emb|CAM61519.1| Arginyl-tRNA synthetase (ArgS) [Mycobacterium abscessus] Length = 550 Score = 551 bits (1420), Expect = e-154, Method: Composition-based stats. Identities = 195/582 (33%), Positives = 300/582 (51%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + L++ + + ++ L +V +ERPR+ HG +TN A+ +++ +G+ P Sbjct: 4 ADLADLLRSTATTVLDERGLDTSALPAVVTVERPRNPEHGDYATNVALQVAKKVGVAPRD 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A +V + + IAG GF+NL ++ I+++I+ +G YG + + Sbjct: 64 LAGWLVEALVSHAAIAGAEIAGPGFVNLRIAADAQGTIVANILKAGETYGNSDAQGTHTI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L+A G +VTREYY ND GAQI+ S+ Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLARQGAKVTREYYFNDHGAQIDRFVRSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + + PE Y G Y+ + K++ + E L E + + ++ V M Sbjct: 184 SAEGK------EAPEDGYAGDYIADIAKQVITQ-RPEALTLTEPERSEVFREIGVDLMFT 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I++ L D+F ED H +++ I L + G +YE Sbjct: 237 HIKESLHEFGTDFDVFTHEDSMHT--SGRVQEAIAQLRKTGNIYE--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 RS+ GDD DR ++KSDG+ Y A D+AY+ K ERGFD IY++G+DH GY Sbjct: 280 -KDGASWLRSSNFGDDKDRVVIKSDGNPAYIAGDIAYYLDKRERGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+AVAAA+ + VL+ ++V L RDG P++MSKRAG ITL +VD +G D+ R Sbjct: 339 IARLKAVAAALGYDADSVEVLIGQMVNLVRDGQPVRMSKRAGTVITLDDLVDAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D S ENPV+YVQYA+AR ++ R A D+ + Sbjct: 399 YALIRSSVDTSIDIDLELWASASSENPVYYVQYAHARLCALARNAADLG-------LQHS 451 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 E E LI L E+ R+++NA +EP+++A YL D+A +H + R P Sbjct: 452 TEHLELLTHEKEGALIRGLGEFGRILQNAAALREPHRVARYLEDIAGDYHRFYDSCRVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L RL L A +I +GL+I+GV +P M Sbjct: 512 QG---DETPGDLHAARLALCLATRQVIANGLDILGVSAPERM 550 >gi|312898221|ref|ZP_07757612.1| arginyl-tRNA synthetase [Megasphaera micronuciformis F0359] gi|310620718|gb|EFQ04287.1| arginyl-tRNA synthetase [Megasphaera micronuciformis F0359] Length = 554 Score = 551 bits (1419), Expect = e-154, Method: Composition-based stats. Identities = 191/584 (32%), Positives = 300/584 (51%), Gaps = 35/584 (5%) Query: 6 DFSSRLKNYLKEIDCK----IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 D + +K + +++E P G +TN AM +R P Sbjct: 2 DMKETVIQGIKAALAAAVSAGDLPDGEYPDVLLEVPPQKEFGDFATNIAMQSARIAHKSP 61 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 IA++++ + P ++ +AG GFIN +L + L I+ G +YG+ + Sbjct: 62 RMIADVLLKHLDA-PWLEKAEVAGAGFINFFLKHDIIYDTLCHILEQGKQYGQAPLRAED 120 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 V +E+VSANPTGP+HVGH R A G L +L+ +GY V EYYINDAG Q+N LA SV Sbjct: 121 TVQVEYVSANPTGPLHVGHGRGAAYGSALVNLLRAAGYNVQSEYYINDAGNQMNNLAASV 180 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 RY + L +++PE Y G + + + ++ + L E+ L I K+ + + Sbjct: 181 NARYLELL-GKKAEIPENGYHGADIIDTARAIIEQDGDKYLQMDEKDRLEIFKNRAYEEK 239 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 +K ++ DL++ N+ D + SE H P I+ + L G +YE Sbjct: 240 LKALKRDLESFNVTFDKWFSERTLH---PEAIKKACETLKGNGNMYE------------- 283 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 L +ST GDD DR +++ +G TY AAD+AY K KYER F +I + G+DH Sbjct: 284 ---KDGALWLKSTAYGDDKDRVVIRDNGVPTYLAADIAYHKNKYERQFKKLINIWGADHH 340 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 GYV R++A AA+ Q+ +LL ++V L+R+G +KMSKR G ITL +++EVG+D+ Sbjct: 341 GYVARVKAAMAALGLDPNQLEILLLQMVSLFRNGELVKMSKRTGQAITLNELIEEVGTDA 400 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 R+ + R LDFD K S ENPV+Y+QYA AR SI++Q + D Sbjct: 401 ARYFFIMRSLDTQLDFDLDLAKSHSNENPVYYIQYANARIFSIYKQIAENGDVFDMTWKN 460 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 I + + EL LI +A YP I A + P+++A ++Y++A +FH +++ Sbjct: 461 ---IKWDKLKEERELALIKKMAAYPEEIRKAAAERAPHRIAHFVYEMAGLFHAFYNNCH- 516 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++++L RL LV AV I + L ++G+ +P M Sbjct: 517 ------IIQSDKELEEARLALVTAVQITIANCLAVLGISAPETM 554 >gi|282849795|ref|ZP_06259179.1| arginine--tRNA ligase [Veillonella parvula ATCC 17745] gi|282580732|gb|EFB86131.1| arginine--tRNA ligase [Veillonella parvula ATCC 17745] Length = 577 Score = 550 bits (1418), Expect = e-154, Method: Composition-based stats. Identities = 199/607 (32%), Positives = 306/607 (50%), Gaps = 52/607 (8%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + S ++ L++ + IV+E P G STN AM +R + Sbjct: 1 MDMKEILKSGIEQALQDTINSGDLPAGEYPEIVLEVPPQKEFGDFSTNIAMQSARVARQN 60 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P IAE +++ + D ++ +AG GFIN +L + L +I+ +G EYG + Sbjct: 61 PRAIAEALISHMNFD-WLERAEVAGAGFINFFLKSDMVYDTLKAILNAGTEYGVQPLRAR 119 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 + +E+VSANPTGP+HVGH R A G L +L+ +GY V EYYINDAG QI+ +A+S Sbjct: 120 DTIQVEYVSANPTGPLHVGHGRGAAYGSALVNLLRAAGYNVQSEYYINDAGNQIDNMAIS 179 Query: 181 VFWRYQQA---------LYNNDSD------------LPEGYYPGVYLKHVGKELADKYS- 218 + +R+Q+ N D PE Y G + K +A++ Sbjct: 180 IEYRFQELQGATLVFPPKRNEDGSMPEFDIPEGALVFPENGYRGPDIIETAKAIAEREGF 239 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 +L E + + K+ ++ + + + L+ + D + SE H + I ++ Sbjct: 240 DKLNAMNEVDRIALFKEEGLKEKLARLEETLRNFRVTFDNWFSERTVH--ESDEIHHSVE 297 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 L G VYE L +ST GDD DR +++ +G TY AAD+ Sbjct: 298 ALKALGKVYE----------------KDGALWLKSTDYGDDKDRVVIRDNGVPTYLAADI 341 Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 AY + KY+RGF MI + G+DH GYV R++A AA ++ VLL ++V L+RDG + Sbjct: 342 AYHRNKYDRGFKEMIDIWGADHHGYVCRVKAAMAAFGYDPDKLTVLLLQMVALFRDGRLV 401 Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 K+SKR+GD +TL +++EVG D+ R+ L R LDFD K +S +NPV+Y+QYA+ Sbjct: 402 KLSKRSGDSVTLDELIEEVGVDASRYFFLMRSLDSQLDFDINLAKSRSNDNPVYYIQYAH 461 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 AR SI+ Q + N + EL+LI LAEYP + A + P Sbjct: 462 ARIHSIYNQVHEAG----IAFGDYNETDFTTLTSEMELELIKKLAEYPEEVVQAAEHRAP 517 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 +++A YLYDLAS+FH + GR + + L RL L+ A+A ++ GL I+G Sbjct: 518 HRIARYLYDLASMFHSFYRQGR-------IIGVDPALQQARLGLITAIALVLRQGLGILG 570 Query: 579 VESPNEM 585 + +P +M Sbjct: 571 ISAPEKM 577 >gi|255324499|ref|ZP_05365616.1| arginine--tRNA ligase [Corynebacterium tuberculostearicum SK141] gi|255298405|gb|EET77705.1| arginine--tRNA ligase [Corynebacterium tuberculostearicum SK141] Length = 550 Score = 550 bits (1417), Expect = e-154, Method: Composition-based stats. Identities = 189/582 (32%), Positives = 308/582 (52%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD ++ +K ++ +++ +L + +ERPR+ HG +TN A+ +++ G +P Sbjct: 4 ADLATLIKETAVKVMESHELDSSVLPETVTVERPRNPEHGDYATNVALQVAKKAGANPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 + + + + V IAG GFIN+ L+ +I++ I+ +G EYG N G KV Sbjct: 64 LGGWLAEALADNDAVAEADIAGPGFINIRLAADAQGEIVAQILRAGKEYGSNDSFAGKKV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++ SG EVTREYY ND G QI+ + S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAEVTREYYFNDHGGQIDRFSRSLVA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y++ + + + +K S L +E+ + V+ M Sbjct: 184 AAK------GEPTPEDGYGGAYIQDIAQAVVEKNPSA-LEGSDEEVQEAFRADGVEMMFA 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L + D++ E+ + + ++ L +G++YE Sbjct: 237 QIKQSLHEFGVDFDVYFHENSLF--ESGAVDSALEKLKAEGHMYEA-------------- 280 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 +ST GD DR ++KSDG+ Y A D+AY K++RG D IY++G+DH GY Sbjct: 281 --ENAWWLKSTDYGDSKDRVVVKSDGNAAYIAGDIAYVADKFDRGHDLNIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 V RL+A AAA+ + VL+ +LV L RDG P++MSKRAG IT+ +V +G D+ R Sbjct: 339 VPRLKAAAAALGYNADAVEVLIGQLVNLLRDGKPVRMSKRAGTVITMEDLVAAIGVDASR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ + +D D + QS +NPV+YVQY +AR SI R+A ++ +D + + Sbjct: 399 YSLVRSSVDQSIDIDLGLWESQSSDNPVYYVQYGHARLCSIGRKAAELG--VDSEGADLS 456 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ + E D LI L E+P V+E A +EP+++A Y DLA+VFH + + P Sbjct: 457 LLTHDREGD-----LIRTLGEFPAVVEEAAQLREPHRIARYAEDLAAVFHRFYDSCQVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + RL L A ++ + L ++GV +P +M Sbjct: 512 K---AGEDEAPIHGARLALAQASRVVLANALTMVGVSTPEKM 550 >gi|297618464|ref|YP_003703623.1| arginyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680] gi|297146301|gb|ADI03058.1| arginyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680] Length = 559 Score = 550 bits (1417), Expect = e-154, Method: Composition-based stats. Identities = 195/582 (33%), Positives = 314/582 (53%), Gaps = 32/582 (5%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 D ++ L++ K + + VIE PR+ HG + N AM+L+R + P+ I Sbjct: 9 DDLRQKIVTALEKAKTGGKFNYQEIPAFVIEVPREKQHGDYACNVAMLLARQARMSPVAI 68 Query: 65 AELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 + I+ + DP + V + G GFIN +L +L + + SG YG++ G KV Sbjct: 69 GQAIIDLLPQNDPLISRVEVKGAGFINFFLKEDWLFDVPRVVWQSGESYGQHKPV-GKKV 127 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EFVSANPTG +H+G+ R +GD+LA++++ +GYEV REYY+NDAG QI LS+ Sbjct: 128 QVEFVSANPTGDLHMGNARGGAIGDSLANILSMAGYEVEREYYVNDAGNQIELFGLSLEA 187 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 RY + L + PEG Y G + + + Y L+ + + +++++ ++ Sbjct: 188 RYLE-LCGCEFRFPEGGYEGQDVVETVRHFIEAYGDYLVGANPYERRQKLTEFALKEKLE 246 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L+A I++D++ SE H D I ++ + L +GY+Y Sbjct: 247 SIKTSLEAFGIRYDVWFSEQSLH--DSGKIEEVTEELKTKGYLY---------------- 288 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 + FR+ + D +++ +G TYFAAD+AY K K+ERGFD +I V G+DH G+ Sbjct: 289 LKEGAWWFRAGEDSGEKDEVVIRKNGLPTYFAADIAYHKNKFERGFDWVINVWGADHHGH 348 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 V R++A AA+ +++V+L +LVRLYR G ++MSKR G +TL +++EVG D+ R Sbjct: 349 VARMKAAIAALGYDPNRLDVILMQLVRLYRGGELVRMSKRTGTLVTLDELLEEVGKDAAR 408 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 F + R LDFD ++QS+ENPV+YVQYA+AR SI RQA+ L + Sbjct: 409 FFFVMRSPDSHLDFDMELAQKQSQENPVYYVQYAHARICSIMRQAERAGIL----LKNPD 464 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + EL+L+ +AE+P I A P+++A Y+ DLA +FH +++H R Sbjct: 465 EVNLRLLCLPEELELLRKVAEFPNEISMAAATLSPHRIARYVLDLAGMFHSYYNHHR--- 521 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V L R+ L+ A+ ++ + L ++GV +P M Sbjct: 522 ----VLNEEENLRDARMVLMEAIRRVVKNSLGVLGVSAPERM 559 >gi|237747206|ref|ZP_04577686.1| arginyl-tRNA synthetase [Oxalobacter formigenes HOxBLS] gi|229378557|gb|EEO28648.1| arginyl-tRNA synthetase [Oxalobacter formigenes HOxBLS] Length = 571 Score = 550 bits (1417), Expect = e-154, Method: Composition-based stats. Identities = 202/605 (33%), Positives = 317/605 (52%), Gaps = 56/605 (9%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDR---IVIERPRDCAHGHLSTNAAMILSRPLGL 59 + A + N +E + E + LD+ + +ERPRD +HG ++ N AM L++PL Sbjct: 1 MLAQQKQLITNLFREAVDSL-TEGQNLDKHPSVSLERPRDASHGDIACNIAMQLAKPLKK 59 Query: 60 DPLTIAELIVARIKIDPDVDSV----FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115 +P IA+ I++ + +P+ +S+ IAG GFINL L+ S + ++ +++ +YG Sbjct: 60 NPRQIAQTILSSVLSNPEHESLIESGEIAGPGFINLRLTSSAKQSVVKTVIKQKEKYGFG 119 Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175 G G KV +EFVSANPTGP+HVGH R +GD +++L GY VTRE+Y NDAG QI Sbjct: 120 NQGAGKKVMVEFVSANPTGPLHVGHGRQGALGDAISTLFETQGYSVTREFYYNDAGVQIE 179 Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE------LADKYSSELLNFPEEKW 229 L LSV R + L D+ PE Y G Y+ + + L + + + Sbjct: 180 NLTLSVQAR-AKGLKPGDAGWPESAYNGDYIADIAADFLAGKTLEARNCQPVTGSGNVED 238 Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 L +++++V + K +DL A I D F E +R +++ +D L ++G +E Sbjct: 239 LKSIREFAVAYLRKEQDNDLNAFGIHFDNFFLESSLYR--DGKVQETVDTLTKEGKTFES 296 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349 L ++T GDD DR + K+DG+YTYF D+AY K++RGF Sbjct: 297 ----------------EGALWLKTTEYGDDKDRVMRKTDGTYTYFVPDVAYHINKWKRGF 340 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEK--KAQINVLLCELVRLYRDGMPIKMSKRAGDF 407 D +I V GSDH G V R+ A AV++ + +L ++V + +DG +K+SKRAG + Sbjct: 341 DKVINVQGSDHHGTVARVRAGLQAVNQDIPPGFPDYVLHKMVTVMKDGAEVKISKRAGSY 400 Query: 408 ITLRHVVD-------EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYAR 460 +T+R +++ E G D+VRF ++ RK FD +S ENPV+YVQYA+AR Sbjct: 401 VTVRDLIEWSGAGDVERGRDAVRFFLISRKADTEFVFDVDLALSRSDENPVYYVQYAHAR 460 Query: 461 CRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYK 520 S+F Q L+ V P E+ L+ LA+YP ++ A P+ Sbjct: 461 ICSVFSQWGGNESVLEHADLSALVSPHEN-------ALLTKLADYPDILVRALDELSPHL 513 Query: 521 LAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVE 580 +AFYL +LA HG+++ R N+ + RL L+ A ++ +GL ++GV Sbjct: 514 VAFYLRELAGELHGYYNAERF-------LVNDEPTKLARLALLKATRQVLRNGLALLGVS 566 Query: 581 SPNEM 585 +P +M Sbjct: 567 APVKM 571 >gi|311740633|ref|ZP_07714460.1| arginine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035] gi|311304153|gb|EFQ80229.1| arginine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035] Length = 550 Score = 550 bits (1417), Expect = e-154, Method: Composition-based stats. Identities = 188/582 (32%), Positives = 308/582 (52%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD ++ +K ++ +++ +L + +ERPR+ HG +TN A+ +++ G +P Sbjct: 4 ADLATLIKETAVKVMESHELDSSVLPETVTVERPRNPEHGDYATNVALQVAKKAGANPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 + + + + V IAG GFIN+ L+ +I++ I+ +G EYG N G KV Sbjct: 64 LGGWLAEALADNDAVAEADIAGPGFINIRLAADAQGEIVAQILRAGKEYGSNDSFAGKKV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++ SG +VTREYY ND G QI+ + S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAQVTREYYFNDHGGQIDRFSRSLVA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y++ + + + +K S L +E+ + V+ M Sbjct: 184 AAK------GEPTPEDGYGGAYIQDIAQAVVEKNPSA-LEGSDEEVQEAFRADGVEMMFA 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L + D++ E+ + + ++ L +G++YE Sbjct: 237 QIKQSLHEFGVDFDVYFHENSLF--ESGAVDAALEKLKAEGHMYEA-------------- 280 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 +ST GD DR ++KSDG+ Y A D+AY K++RG D IY++G+DH GY Sbjct: 281 --ENAWWLKSTDYGDSKDRVVVKSDGNAAYIAGDIAYVADKFDRGHDLNIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 V RL+A AAA+ + VL+ +LV L RDG P++MSKRAG IT+ +V +G D+ R Sbjct: 339 VPRLKAAAAALGYNADAVEVLIGQLVNLLRDGKPVRMSKRAGTVITMEDLVAAIGVDASR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ + +D D + QS +NPV+YVQY +AR SI R+A ++ +D + + Sbjct: 399 YSLVRSSVDQSIDIDLGLWESQSSDNPVYYVQYGHARLCSIGRKAAELG--VDSEGADLS 456 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ + E D LI L E+P V+E A +EP+++A Y DLA+VFH + + P Sbjct: 457 LLTHDREGD-----LIRTLGEFPAVVEEAAQLREPHRIARYAEDLAAVFHRFYDSCQVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + RL L A ++ + L ++GV +P +M Sbjct: 512 K---AGEDEAPIHGARLALAQASRVVLANALTMVGVSTPEKM 550 >gi|269798641|ref|YP_003312541.1| arginyl-tRNA synthetase [Veillonella parvula DSM 2008] gi|269095270|gb|ACZ25261.1| arginyl-tRNA synthetase [Veillonella parvula DSM 2008] Length = 577 Score = 549 bits (1416), Expect = e-154, Method: Composition-based stats. Identities = 197/607 (32%), Positives = 306/607 (50%), Gaps = 52/607 (8%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + S ++ L++ + IV+E P G STN AM +R + Sbjct: 1 MDMKEILKSGIEQALQDTINSGDLPAGEYPEIVLEVPPQKEFGDFSTNIAMQSARVARQN 60 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P IAE +++ + ++ +AG GFIN +L + L +I+ +G EYG + Sbjct: 61 PRAIAEALISHMNF-AWLERAEVAGAGFINFFLKSDMVYDTLKAILNAGTEYGVQPLRAR 119 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 + +E+VSANPTGP+HVGH R A G L +L+ +GY V EYYINDAG QI+ +A+S Sbjct: 120 DTIQVEYVSANPTGPLHVGHGRGAAYGSALVNLLRAAGYNVQSEYYINDAGNQIDNMAIS 179 Query: 181 VFWRYQQA---------LYNNDSD------------LPEGYYPGVYLKHVGKELADKYS- 218 + +R+Q+ N D PE Y G + K +A++ Sbjct: 180 IEYRFQELQGATLVFPPKRNEDGSMPEFDIPEGALVFPENGYRGPDIIETAKAIAEREGF 239 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 +L E + + K+ ++ + + + L+ + D + SE H + I ++ Sbjct: 240 DKLNAMNEADRVALFKEEGLKEKLARLEETLRNFRVTFDNWFSERTVH--ETDEIHHSVE 297 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 L G VYE L +ST GDD DR +++ +G TY AAD+ Sbjct: 298 ALKALGKVYE----------------KEGALWLKSTDYGDDKDRVVIRDNGVPTYLAADI 341 Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 AY + K++RGF MI + G+DH GYV R++A AA ++ VLL ++V L+RDG + Sbjct: 342 AYHRNKFDRGFKEMIDIWGADHHGYVCRVKAAMAAFGYDPDKLTVLLLQMVALFRDGQLV 401 Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 K+SKR+GD +TL ++DEVG D+ R+ L R LDFD K +S +NPV+Y+QYA+ Sbjct: 402 KLSKRSGDSVTLDELIDEVGVDASRYFFLMRSLDSQLDFDINLAKSRSNDNPVYYIQYAH 461 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 AR SI+ Q ++ + + EL+LI LAEYP + A + P Sbjct: 462 ARIHSIYNQVREAG----IAFGDYSETDFTTLTSEMELELIKKLAEYPEEVVQAAEHRAP 517 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 +++A YLYDLAS+FH + GR + + L RL L+ A+A ++ GL I+G Sbjct: 518 HRIARYLYDLASMFHSFYRQGR-------IIGVDPALQQARLGLITAIALVLRQGLGILG 570 Query: 579 VESPNEM 585 + +P +M Sbjct: 571 ISAPEKM 577 >gi|125974436|ref|YP_001038346.1| arginyl-tRNA synthetase [Clostridium thermocellum ATCC 27405] gi|256005211|ref|ZP_05430179.1| arginyl-tRNA synthetase [Clostridium thermocellum DSM 2360] gi|281418961|ref|ZP_06249979.1| arginyl-tRNA synthetase [Clostridium thermocellum JW20] gi|166232780|sp|A3DGS4|SYR_CLOTH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|125714661|gb|ABN53153.1| arginyl-tRNA synthetase [Clostridium thermocellum ATCC 27405] gi|255990865|gb|EEU00979.1| arginyl-tRNA synthetase [Clostridium thermocellum DSM 2360] gi|281407418|gb|EFB37678.1| arginyl-tRNA synthetase [Clostridium thermocellum JW20] gi|316941572|gb|ADU75606.1| arginyl-tRNA synthetase [Clostridium thermocellum DSM 1313] Length = 564 Score = 549 bits (1416), Expect = e-154, Method: Composition-based stats. Identities = 184/586 (31%), Positives = 314/586 (53%), Gaps = 32/586 (5%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + +KN + + ++ + +D + IE P++ HG STN AM ++ + P Sbjct: 8 IKKQINEVVKNSISKAVQNGELPQFTVDELFIEIPKEKGHGDFSTNIAMQAAKTVRKAPR 67 Query: 63 TIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +AE+I+ + + + +D V AG GFIN +L+ ++L +L I YG IG+G Sbjct: 68 QVAEIIIKNMDLSNTYIDRVEAAGPGFINFFLTNAWLYDVLKVIQKEKENYGNLDIGRGQ 127 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 KV +EFVSANPTGP+H+G+ R +GD +AS++ +GY+VTRE+YINDAG QI +S+ Sbjct: 128 KVMVEFVSANPTGPLHMGNARGGALGDCIASVLEKAGYDVTREFYINDAGNQIEKFGISL 187 Query: 182 FWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 RY Q L D+ + PE Y G + K ++ LL E+ + +Y++ Sbjct: 188 EARYIQLLKGEDAVEFPEDGYHGEDIIDHMKAYIEENGDNLLYVDSEERRKTLVEYALPK 247 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 ++ IR L+ + D++ SE + D +R+ +D L +GY +E Sbjct: 248 NIERIRKSLENYGVVFDVWFSEQSLY--DNGEVRETLDILKEKGYTFE------------ 293 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSD 359 + F+++ +G + D +++++G TYFAAD+AY + K+ +R FD +I ++G+D Sbjct: 294 ----KDGAVWFKASALGAEKDEVIVRNNGIPTYFAADIAYHRNKFLKRKFDRVINLLGAD 349 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H G+ R++ A ++++++ +LVRLYR+G +MSKR G I+L +++EVG Sbjct: 350 HHGHAARMKCALKAFDIDPDKLDIVIFQLVRLYRNGEIARMSKRTGRAISLDDLLEEVGR 409 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ RF + + LDFD ++S ENPV+YVQYAYAR S+ R + F + Sbjct: 410 DAARFFFNTKASGSHLDFDLDLAVKKSNENPVYYVQYAYARSCSMLR----LLESEGFKV 465 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + E++L+ L+EYP I + EP +L Y+ D+AS FH ++ Sbjct: 466 PDVDSVDLTVLKAPEEIELMKKLSEYPEEIRISAQTLEPSRLTRYVLDVASNFHSFYNAC 525 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R V+ L R+ LV + +I + L+++ + +P +M Sbjct: 526 R-------VKGEEENLMYARMILVDSTRLVIKNVLDVLSITAPEKM 564 >gi|293399769|ref|ZP_06643915.1| arginine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306169|gb|EFE47412.1| arginine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 555 Score = 548 bits (1412), Expect = e-153, Method: Composition-based stats. Identities = 195/558 (34%), Positives = 302/558 (54%), Gaps = 37/558 (6%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD-VDSVFIAGKG 87 +++IVIE P+D +HG STN AM L+R L +P IAE + + ++ ++ IAG G Sbjct: 34 IEKIVIEIPKDKSHGDYSTNLAMQLTRLLKNNPRVIAEALQQNLDMEAAAIEHCEIAGPG 93 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 F+N + + L +I+ +++ G +G N G +VNIE+VSANPTG +H+GH R A G Sbjct: 94 FLNFKIKNTSLAQIIKTVLAQGDNFGHNETGNHERVNIEYVSANPTGDLHLGHARGAAWG 153 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D++ LM SGY+VTREYY+NDAG QI L S+ RY++ L LPE Y G ++ Sbjct: 154 DSITRLMKASGYDVTREYYVNDAGNQIVNLGKSLQARYREYL-GLPFVLPEDGYHGEDVR 212 Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 + +LA Y +E L K+ + + I+ DL + D++ SE Sbjct: 213 KIAVKLAQTYGQTYAEENDE-NLKFFKEKGIAFELDKIKCDLDNFRVHFDVWSSEQKI-- 269 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 D + +D L +G YE + L F++T GDD DR L K+ Sbjct: 270 RDDGKVEKALDVLHEKGLTYE----------------EEGALWFKTTQFGDDKDRVLRKT 313 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387 DGSYTY D+AY K K +RGFD ++ ++G+DH GY+ RL+A A+ ++ V + + Sbjct: 314 DGSYTYLVPDIAYHKDKLDRGFDLLVDLLGADHHGYIPRLKASIQALGNDPEKLQVDIIQ 373 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 +VRL +G +KMSKR G+ +T+R + DEVG D+VR+ + R LDFD ++QS Sbjct: 374 MVRLVENGEEVKMSKRLGNAVTIRELCDEVGVDAVRYFFVQRAVDTHLDFDLGLARKQSN 433 Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 +NPV+Y QYA+AR SI RQA D ++DL E+ L+ ++ E+ Sbjct: 434 DNPVYYAQYAHARICSILRQAPDFKEATNYDLLT----------HEKEISLMKYINEFTN 483 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 V+ +A + P+K+ Y+ LA FH ++ + + + L+ RL L+ A Sbjct: 484 VVSDAAKTRAPHKVCNYIQKLAQHFHSFYNAC------KVIDPEHEALSAQRLALLKATR 537 Query: 568 SIINSGLNIIGVESPNEM 585 + + L +IGV++ +M Sbjct: 538 ITLKNALFLIGVDAIEKM 555 >gi|289207432|ref|YP_003459498.1| arginyl-tRNA synthetase [Thioalkalivibrio sp. K90mix] gi|288943063|gb|ADC70762.1| arginyl-tRNA synthetase [Thioalkalivibrio sp. K90mix] Length = 587 Score = 548 bits (1412), Expect = e-153, Method: Composition-based stats. Identities = 200/602 (33%), Positives = 309/602 (51%), Gaps = 60/602 (9%) Query: 16 KEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID 75 + + ++ + + R RD HG ++N AM L+RP P +AE + A + Sbjct: 14 ETLVADGRIPPDHGVEVQVTRARDREHGDFASNLAMQLARPAKAKPRDLAEALCAAMPAV 73 Query: 76 PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGP 135 P + IAG GFIN L+ ++L I G ++GR+ +G G V +EFVSANPTGP Sbjct: 74 PGLAGTEIAGPGFINFRLAADARTQVLGRIAAQGADFGRSSVGNGRPVQVEFVSANPTGP 133 Query: 136 MHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSD 195 +HVGH R A G T+A L+ F G++VTREYY+NDAG Q+N LA SV+ RY + + Sbjct: 134 LHVGHGRGAAFGATVADLLDFCGFDVTREYYVNDAGRQMNILAASVWLRYLEQ-HGVQVP 192 Query: 196 LPEGYYPGVYLKHVGKELADKYSSELLN---------FPEE------------------- 227 P Y G Y+ V + L + + ++ P+E Sbjct: 193 FPTNGYQGDYIYPVAESLTAQIGEQAVHPATAVTRDLPPDEPAGGDKEVYIDAVIARARE 252 Query: 228 ----KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQ 283 + V D + A+++ IRDDL+ +++ + SE D I + +L Sbjct: 253 LLGPELYRTVFDCGLNAILEDIRDDLREFGVEYQCWFSERSL--ADSGAIDAAVQDLQAH 310 Query: 284 GYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKC 343 G +YE L FRST GDD DR + + +G YTYFA+D+AY + Sbjct: 311 GALYE----------------QDGALWFRSTDYGDDKDRVVRRENGDYTYFASDIAYHRE 354 Query: 344 KYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKR 403 K++RGF+ +I + G+DH GYV R+ A A+ + +++VLL + LYR G + MS R Sbjct: 355 KFQRGFERVINIWGADHHGYVPRVRAALQALGLEADRLDVLLVQFAILYRGGERLPMSTR 414 Query: 404 AGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRS 463 AG F+TLR + DEVGSD+ RF + R+ + LDFD K QS +NP++Y+QYA+AR S Sbjct: 415 AGQFVTLRELRDEVGSDAARFFYVQRRCDQHLDFDLDLAKSQSNDNPMYYIQYAHARIAS 474 Query: 464 IFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 + R A + + + E L+ L +P VI A A EP+++A Sbjct: 475 VLRTAAERGHTAS---ALDDTGLSACLTEPQEDDLLDRLDRFPEVIAAAAEACEPHQIAQ 531 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 YL +LA+ FH +++ + F+ A + + RL L+ + ++++GL ++GV +P Sbjct: 532 YLRELAAGFHTYYNA------VPFLNAEDATVIGARLALLTGIKQVLHNGLRLLGVTAPE 585 Query: 584 EM 585 M Sbjct: 586 RM 587 >gi|238060801|ref|ZP_04605510.1| arginyl-tRNA synthetase [Micromonospora sp. ATCC 39149] gi|237882612|gb|EEP71440.1| arginyl-tRNA synthetase [Micromonospora sp. ATCC 39149] Length = 554 Score = 548 bits (1412), Expect = e-153, Method: Composition-based stats. Identities = 190/584 (32%), Positives = 304/584 (52%), Gaps = 36/584 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 A+ + + + + ++ L R +ERPR+ HG ++ A+ LS+ +G+ P Sbjct: 4 AELAEVVLSAAHAVFTDRGLDSSALPGRTTVERPRNPEHGDYASTLALQLSKKVGVPPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + ++ + SV IAG GF+N+ L + ++ SIV +G YGR+ G K+ Sbjct: 64 LATALAEQLGRAAGIKSVEIAGPGFLNIRLDAAAAGQLARSIVEAGPAYGRSTALAGQKI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L+ L+ +G +V EYY NDAG+QI+ A S+ Sbjct: 124 NLEFVSANPTGPVHIGGVRWAAVGDALSRLLRATGADVGTEYYFNDAGSQIDRFARSLLA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + E ++L ++ + + V M Sbjct: 184 AAK------GEPAPEDGYGGAYIAEIATE-VRTRRPDVLELADDAAQEVFRVEGVALMFS 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L+ ++ D + +E D H D + + L QG+V++ Sbjct: 237 EIKSSLRDFGVEFDTYFNEKDLH--DRGELDQALARLREQGHVFDT-------------- 280 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 R+T GDD DR L KS+G +TYFAAD AY+ K ERGFD ++ ++G+DH GY Sbjct: 281 --DGATWLRTTDFGDDKDRVLRKSNGEWTYFAADCAYYLDKRERGFDRVVIMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 + R++A+AA + A + +L+ +LV L RDG P++MSKRAG +TL +VD +G D+ Sbjct: 339 IGRMKAMAACFGDDPAVTLEILIGQLVNLLRDGQPVRMSKRAGTVVTLEDLVDAIGVDAS 398 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF-PDLDFDLFP 481 R+ + + +D D +++NPV+YVQY AR S+ R A ++ D + F Sbjct: 399 RYALARYSSDSPIDIDVELWTRATRDNPVYYVQYVAARTASVGRNAAEVGLIRGDAEAFR 458 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 ++ + E D L+ LAE+P V+ A +EP+++A YL +LA +H + + R Sbjct: 459 PELLAHDKEND-----LLKALAEFPAVVATAAELREPHRVARYLEELAGAYHRFYDNCRI 513 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 PR L RL L A ++I +GL ++GV +P M Sbjct: 514 LPRG---DEEVTDLHRARLWLNDATRTVIANGLCLLGVSAPERM 554 >gi|254495636|ref|ZP_05108558.1| arginyl-tRNA synthetase [Legionella drancourtii LLAP12] gi|254355206|gb|EET13819.1| arginyl-tRNA synthetase [Legionella drancourtii LLAP12] Length = 586 Score = 548 bits (1412), Expect = e-153, Method: Composition-based stats. Identities = 198/611 (32%), Positives = 317/611 (51%), Gaps = 61/611 (9%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 L+ L + V + I ++R +D AHG ++N A+IL++P P IAE Sbjct: 5 VEQLLRQALTTLQKSGDVPADLDIEIKVDRAKDSAHGDYASNLALILAKPCRQAPRKIAE 64 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 L+V + V+ V IAG GFIN +L +I++ I+ ++GR+ +G+ KV +E Sbjct: 65 LLVQALPDAAFVEKVEIAGAGFINFFLRSDARSQIIAEILHKEEQFGRSTLGQNQKVLVE 124 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+HVGH R A G TL +++ +GY+VT EYY+NDAG Q+N LA SV+ RY Sbjct: 125 FVSANPTGPLHVGHGRSAAFGATLCNVLKAAGYDVTSEYYVNDAGRQMNILAASVWLRYL 184 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE------------------- 227 + L +P Y G Y+ + + L ++ + ++ E Sbjct: 185 E-LAAEPVVIPANAYKGEYVIEIAQVLWTQHGKQFVHPWAEILNGMPADEPQGGDKEIYI 243 Query: 228 -------------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274 + +++ ++ I+DDL + +D + SE + I Sbjct: 244 DAMIERANVLLGQDAFALFHQHALTTVLDDIKDDLTEFGVHYDNWFSEYSLFQ--DGSIE 301 Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334 I L G+ YE L F++T GD+ DR L++++G TYF Sbjct: 302 KGIQALKDAGHTYE----------------QEGALWFKATDFGDEKDRVLVRANGQKTYF 345 Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394 A+D+AY KY+RGFD +I + G+DH GYV RL + A+ + + VLL + LYR Sbjct: 346 ASDVAYHWNKYDRGFDRVIDIFGADHHGYVTRLRSAVTALGHDERALTVLLVQFAILYRG 405 Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454 G ++MS R+G F+TLR + EVG+D+ RF + RK+ + +DFD K +S +NPV+Y+ Sbjct: 406 GDRVQMSTRSGSFVTLRELRQEVGNDAARFFYVARKSEQHMDFDLDLAKSESSDNPVYYL 465 Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514 QYA+AR S+ RQ K+ D + NV + E LI + YP V+E + Sbjct: 466 QYAHARICSVLRQLKERGLLWDKAIGLENVHLLDQ---PHETALIALICRYPEVVELSAS 522 Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 + EP+++A+YL +LA+ H +++ + + +L RL L+ AV ++++GL Sbjct: 523 SCEPHQIAYYLRELANGLHSYYNAVQ-------LLCEQEQLRCARLCLLAAVRQVLSNGL 575 Query: 575 NIIGVESPNEM 585 +++GV +P M Sbjct: 576 DLLGVSAPESM 586 >gi|54023014|ref|YP_117256.1| arginyl-tRNA synthetase [Nocardia farcinica IFM 10152] gi|81375821|sp|Q5Z0Z9|SYR_NOCFA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|54014522|dbj|BAD55892.1| putative arginyl-tRNA synthetase [Nocardia farcinica IFM 10152] Length = 552 Score = 548 bits (1412), Expect = e-153, Method: Composition-based stats. Identities = 187/582 (32%), Positives = 299/582 (51%), Gaps = 34/582 (5%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + L+ ++ + ++ +L D + +ERPR+ HG +TN AM +++ G +P Sbjct: 4 ADLADLLRATAAKVLAERGLDPAVLPDEVTVERPRNPEHGDYATNLAMKVAKKAGTNPRD 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + + S +AG GF+N+ L+ + +L ++ +G YG +GTK+ Sbjct: 64 LAGWLAEALGAADGITSAEVAGPGFLNIRLAAAAQGAVLEQVLAAGSGYGTADTLRGTKI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L ++A G +VTREYY ND GAQI+ A S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWASVGDALGRILAAQGADVTREYYFNDHGAQIDRFANSLVA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 P+ Y G Y+ + +++ ++ P ++ + + V+ M Sbjct: 184 AA------TGQPTPDDGYAGAYIGEIAEQIVAEHPEAPT-LPADQRHELFRAEGVELMFA 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L D++ +E + ++ L G +YE Sbjct: 237 HIKRTLHEFGTDFDVYFNESTLFA--SGAVEQAVETLKASGDLYE--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 S+ GDD DR ++KSDG+ Y A D+AYF+ K RGFD IY++G+DH GY Sbjct: 280 -KDGAWWIASSEYGDDQDRVVIKSDGNAAYIAGDIAYFQNKRSRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA + A + VL+ ++V L RDG +KMSKRAG +TL +V+ +G D+ R Sbjct: 339 IGRLKAAAAAFGDDPATVEVLIGQMVNLVRDGQAVKMSKRAGTVVTLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ + +D D Q ENPV+YVQYA+AR SI R A D+ + Sbjct: 399 YALVRWSVNSSVDIDLNLWTSQKNENPVYYVQYAHARTASIGRNAA----AFDYASVTPD 454 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + +E E +LI + EYPRV+ +A +EP+++A YL +LA +H + Sbjct: 455 LSQLTAE---EEGELIRTIGEYPRVVASAASLREPHRVARYLEELAGAYHRF-QTNSKLR 510 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L L RL LV+A ++ +GL ++GV +P +M Sbjct: 511 VLPLGDDPVSPLNAARLVLVNATRQVLANGLALLGVSAPEQM 552 >gi|167561324|ref|ZP_02354240.1| arginyl-tRNA synthetase [Burkholderia oklahomensis EO147] gi|167568554|ref|ZP_02361428.1| arginyl-tRNA synthetase [Burkholderia oklahomensis C6786] Length = 594 Score = 547 bits (1411), Expect = e-153, Method: Composition-based stats. Identities = 201/615 (32%), Positives = 316/615 (51%), Gaps = 65/615 (10%) Query: 7 FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 + L+N +K++ K + +L I +ERP+ AHG ++ N A+ L++PLG +P Sbjct: 9 LETLLENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQ 68 Query: 64 IAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +AE IVA + P+ VD+ IAG GFINL L+P+ + ++ ++ G +G + Sbjct: 69 LAERIVAALTAQPEAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVFAEGRAFGASSRDH 128 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA+ Sbjct: 129 GKRVLLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAI 188 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233 S R + L D+ PE Y G Y+ + ++ A + + + L + Sbjct: 189 STQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGQPVTGKRDVEDLEAI 247 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 + ++V + + DLKA ++ D + E + + +D L G YE Sbjct: 248 RKFAVTYLRREQDMDLKAFGVKFDQYYLESSLYT--EGRVEKTVDALIEAGMTYE----- 300 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353 L R+T GDD DR + K+DG+YTYF D+AY K+ERGF +I Sbjct: 301 -----------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVI 349 Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+R Sbjct: 350 NIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVR 409 Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 +++ G D+VRF ++ RK FD +Q+ ENP Sbjct: 410 DLIEWSGGATPGSEASPDLLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+YVQYA+AR S+ + K + D ++ P +S+ + L+ LAEYP V+ Sbjct: 470 VYYVQYAHARICSVLNEWKSRYGATDALFANADLSPLDSK---QAMALMQKLAEYPDVLA 526 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A P+ +AFYL DLAS FH ++ R V + L R+ L+ A ++ Sbjct: 527 HAASELAPHAVAFYLRDLASEFHSFYNAER-------VLVDEEALRTARVALLAATRQVL 579 Query: 571 NSGLNIIGVESPNEM 585 +GL ++GV +P++M Sbjct: 580 ENGLAMLGVSAPSKM 594 >gi|121999194|ref|YP_001003981.1| arginyl-tRNA synthetase [Halorhodospira halophila SL1] gi|166232793|sp|A1WZR7|SYR_HALHL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|121590599|gb|ABM63179.1| arginyl-tRNA synthetase [Halorhodospira halophila SL1] Length = 584 Score = 547 bits (1411), Expect = e-153, Method: Composition-based stats. Identities = 208/609 (34%), Positives = 319/609 (52%), Gaps = 59/609 (9%) Query: 7 FSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 +S L LK + ++ + L + +ER RD AHG + N AM+L++P P +A Sbjct: 5 VASLLAQALKAMREAGELPADLELPEVQVERARDRAHGDYAANTAMVLAKPARQKPRDLA 64 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 E I +R+ + V IAG GF+N L+ + ++ + + G EYGR+ +G G +V+I Sbjct: 65 ETIRSRLPASEAIAGVEIAGPGFLNFTLTTAARQESVRVALRQGAEYGRSDVGAGHRVHI 124 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+HVGH R A GD LAS++ +GY V REYY+NDAG Q++ LA S++ RY Sbjct: 125 EFVSANPTGPLHVGHGRGAAFGDALASVLEAAGYHVHREYYVNDAGRQMDILAASLWLRY 184 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE------------------ 227 +A P Y G Y+ +EL + E + E Sbjct: 185 LEAA-GEPVSFPNKGYQGDYIVTHARELFEADGREHVRTAAELGAGLPAEDDDPEGYLDA 243 Query: 228 -----------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276 V D++++A++ IR DL A + + + SE D I Sbjct: 244 LVARSRELLGETAYRRVLDFALEAILGDIRADLDAFGVHYHRYFSERQLV--DQGRIEHA 301 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336 ++ L + GY Y L F++++ GDD DR L + +G TYFAA Sbjct: 302 LERLDQAGYTYRA----------------DGALWFQASVFGDDKDRVLRRDNGLTTYFAA 345 Query: 337 DLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGM 396 D+AY K ERGFD ++ V G+DH GYV R++A A+ +++V L + LYR G Sbjct: 346 DVAYHLDKIERGFDTLVNVWGADHHGYVPRVQAALKALGVDAERLDVRLVQFAILYRGGE 405 Query: 397 PIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456 + MS R+G+F+TLR + DEVG D+ RF + R++ + +DFD K +S +NPV+Y QY Sbjct: 406 KLPMSTRSGEFVTLRELRDEVGKDAARFFYVMRRSEQHMDFDLDLAKSESADNPVYYCQY 465 Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 A+AR S+FRQ ++ + E E L+ L YP VIE+A +A+ Sbjct: 466 AHARICSVFRQLEERGLACRV---TPDEAALERLDAEHEAILLDLLGRYPEVIESAALAR 522 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 EP+++A YL +LA+ FH +++ + F+ ++ L RL LV A ++ +GL + Sbjct: 523 EPHQVAQYLRELAAAFHTYYNA------VPFII-DDEALRDARLTLVQATRQVLANGLGL 575 Query: 577 IGVESPNEM 585 +GV++P M Sbjct: 576 LGVDAPQSM 584 >gi|262201839|ref|YP_003273047.1| arginyl-tRNA synthetase [Gordonia bronchialis DSM 43247] gi|262085186|gb|ACY21154.1| arginyl-tRNA synthetase [Gordonia bronchialis DSM 43247] Length = 550 Score = 547 bits (1411), Expect = e-153, Method: Composition-based stats. Identities = 183/561 (32%), Positives = 284/561 (50%), Gaps = 35/561 (6%) Query: 25 EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84 E + D + +ERPR HG STN A+ L + LG+ P +A + + +A Sbjct: 25 ETLVPDSVGVERPRHADHGDYSTNIALQLGKRLGVSPRELAGWLAEAYAGADGIAKAEVA 84 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 G GF+NL+L+ + +++++V G EYGR G+ +N+EFVSANPTGP+H+G R A Sbjct: 85 GPGFVNLWLAAAAQNTVIATVVEQGAEYGRGDELGGSVINLEFVSANPTGPIHLGGTRWA 144 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204 VGD L ++ G VTREYY ND G QI+ A S+ Q PE Y G Sbjct: 145 AVGDALGRVLGARGAAVTREYYFNDHGTQIDRFARSLEAAAQ------GGPTPEDGYAGA 198 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 Y+ + + + +L P+++ + + V+ M I++ L D+F ED Sbjct: 199 YIGDIAAAVVQQV-PGVLEQPDDERVETFRSVGVELMFAHIKESLHEFGTDFDVFTHEDS 257 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 + + I L +YE RST GDD DR + Sbjct: 258 MFT--SGLVDECIAELKANDKLYE----------------KDGAWWLRSTEFGDDKDRVV 299 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 +KSDG+ Y A D+AY + K RGF IY++G+DH GY+ RL+A AAA+ + + VL Sbjct: 300 IKSDGNAAYIAGDIAYIRDKRNRGFSLCIYMLGADHHGYISRLKAAAAALGDDPDVVEVL 359 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 + ++V L RDG P++MSKRAG ITL +V+ VG D R+ ++ +D D + + Sbjct: 360 IGQMVNLVRDGKPVRMSKRAGTVITLDDLVEAVGVDGARYSLIRSSVDVNIDIDLDLLTK 419 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 QS ENPV+YVQYA+AR ++ R A D+ ++ + D +E +LI + + Sbjct: 420 QSNENPVYYVQYAHARLSALSRNAADLG-------LQPDLANIDLLVDPAEGELIRTIGD 472 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 + V+ A +EP+++ YL LA +H ++ R P+ + RL L Sbjct: 473 FDEVVATAASLREPHRVCRYLESLAGAYHRFYARCRVLPQG---DEEPADIHRARLALCA 529 Query: 565 AVASIINSGLNIIGVESPNEM 585 A ++ +GL+++GV +P M Sbjct: 530 ATRQVLANGLDLVGVSAPERM 550 >gi|256829388|ref|YP_003158116.1| arginyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028] gi|256578564|gb|ACU89700.1| arginyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028] Length = 551 Score = 547 bits (1410), Expect = e-153, Method: Composition-based stats. Identities = 202/579 (34%), Positives = 315/579 (54%), Gaps = 32/579 (5%) Query: 10 RLKNYLKEIDCKIKVEKK--ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 + KNY+ E + K + + IE P+ HG ++TN M++ + G +P T+AE Sbjct: 2 KAKNYISEKLTALMAAKGQALPAKTTIEAPKSEQHGDMATNITMVMPKEKGQNPRTVAEA 61 Query: 68 IV-ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 + + + P+++S+ IAG GFIN P + +++ + + + ++GR +G+G KV +E Sbjct: 62 LKTELLAMCPEIESIEIAGPGFINFTFKPVFWQEVALAALENKADFGRIDVGQGRKVQVE 121 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 +VSANPTGP+H+GH R A VGD+L ++ F+G+EV EYY+NDAG Q+ L L+V+ RYQ Sbjct: 122 YVSANPTGPLHIGHGRGAAVGDSLTRILRFTGHEVETEYYLNDAGRQMRLLGLAVWVRYQ 181 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 QA + PE Y G Y+K + L + LL+ PEE+ L + + + ++ I+ Sbjct: 182 QAC-GIEIPFPEDCYRGDYIKDISAALLAEKGKALLDLPEEEALDLCYERGMTDILNGIK 240 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 DL ++H + SE G + ++ L +G YE Sbjct: 241 QDLIDFRVEHQHWFSEKSLVDG--GQVEASLNRLLAEGRAYE----------------KD 282 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366 L FRST GDD DR L KSDG TYFA+D+AY K RGFD M+ + G+DH GYV R Sbjct: 283 GALWFRSTDHGDDKDRVLRKSDGLLTYFASDIAYHDNKIARGFDMMVDIWGADHHGYVPR 342 Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 ++A A+ + + + V+L +LV L + G I MS RAG F TL V EVG D+ RF+ Sbjct: 343 MKAAIEALGKDRESLQVILVQLVNLIQGGEQIAMSTRAGKFETLADVCAEVGVDAARFIF 402 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 L RK+ LDFD VK+QS +NPV+YVQYA+AR S+ R+A++ L + Sbjct: 403 LSRKSDSHLDFDLDVVKQQSMDNPVYYVQYAHARISSLMRKAEEQG----VALPEPSGAL 458 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 + L L + +E A P+ +++YL +LA + H +++ Sbjct: 459 MALLTTPEDKALFKALDAFEDTLELAARTLSPHHVSYYLMELAGLLHRYYTVHH------ 512 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +++ L R+ L AVA ++ +GL+++GV +P M Sbjct: 513 ILSGDDQALLQARILLFQAVAGVLKAGLDLLGVNAPERM 551 >gi|78222646|ref|YP_384393.1| arginyl-tRNA synthetase [Geobacter metallireducens GS-15] gi|78193901|gb|ABB31668.1| arginyl-tRNA synthetase [Geobacter metallireducens GS-15] Length = 569 Score = 547 bits (1410), Expect = e-153, Method: Composition-based stats. Identities = 197/592 (33%), Positives = 303/592 (51%), Gaps = 39/592 (6%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + S + ++ + + IVIE+P HG + AM +++ P Sbjct: 8 MKDRVRSLVAEGIERCFADGSLASNQMPAIVIEKPAHAEHGDFACTVAMSMAKAERKAPR 67 Query: 63 TIAELIVARIK--IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 IAE IV I+ + + IAG GFIN + + L+ + +G +GR+ G+ Sbjct: 68 VIAETIVKHIENGESGIIGGIDIAGPGFINFRIKNEAWSRTLAVVEAAGASFGRSCAGEE 127 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KV +EFVSANPTGP+H+GH R A +GDT+ L++ SG++VTRE+Y NDAGAQI LALS Sbjct: 128 RKVQVEFVSANPTGPLHIGHGRGAAIGDTICRLLSASGFDVTREFYYNDAGAQIANLALS 187 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVG-----KELADKYSSELLNFPEEKWLPIVKD 235 V R + D P Y G Y+K V +E D + + L ++ Sbjct: 188 VQSRCL-GIEPGDPRWPADGYQGDYIKDVARSYLNRETVDAGDQHVTAAGDPNDLDAIRR 246 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 ++V + + DL A ++ D++ E + + +++ L G+ +E Sbjct: 247 FAVAYLRREQDQDLLAFDVHFDVYSLESSLYT--EGRVEEVVRRLIENGHTFE------- 297 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 L R+T GDD DR + KSDGSYTYF D+AY K+ERGF +I Sbjct: 298 ---------QDGALWLRTTDFGDDKDRVMRKSDGSYTYFVPDVAYHLAKWERGFTRVINE 348 Query: 356 MGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 G+DH + R+ A A+ + +L ++V + R G +K+SKRAG ++TLR + Sbjct: 349 QGADHHSTITRVRAGLQALNAGIPQEWPEYVLHQMVTVMRGGEEVKISKRAGSYVTLRDL 408 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 +DEVG D+ RF L RK L FD K+QS ENPV+YVQYA+AR SIF A D Sbjct: 409 IDEVGRDATRFFFLMRKPDSQLVFDIDLAKQQSLENPVYYVQYAHARISSIFEAACDRGI 468 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 + +V E+ E++LI + +P VIE + ++ EP+++ +YL +LA FH Sbjct: 469 SVP-SFPDAHVDLLET---PEEIELIKLIGSFPEVIEGSALSFEPHRITYYLQELAGAFH 524 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ R V ++L+ RL L+ VA ++ +GL ++GV +P +M Sbjct: 525 SFYNKNR-------VIGEGKELSSARLFLLKGVAQVLKNGLALLGVSAPEKM 569 >gi|238018516|ref|ZP_04598942.1| hypothetical protein VEIDISOL_00343 [Veillonella dispar ATCC 17748] gi|237864987|gb|EEP66277.1| hypothetical protein VEIDISOL_00343 [Veillonella dispar ATCC 17748] Length = 577 Score = 547 bits (1409), Expect = e-153, Method: Composition-based stats. Identities = 195/607 (32%), Positives = 305/607 (50%), Gaps = 52/607 (8%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + S ++ L++ + IV+E P G STN AM +R + Sbjct: 1 MEMKEILKSGIEQALQDTINSGGLPAGEYPEIVLEVPPQKEFGDFSTNIAMQSARVARQN 60 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P IAE +++ + D ++ +AG GFIN +L + L +I+ +G +YG + Sbjct: 61 PRAIAEALISHMNFD-WLERAEVAGAGFINFFLKSDMVYDTLKAILNAGDQYGVQPLRAR 119 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 + +E+VSANPTGP+HVGH R A G L +L+ +GY V EYYINDAG QI+ +A+S Sbjct: 120 DTIQVEYVSANPTGPLHVGHGRGAAYGSALVNLLRAAGYNVQSEYYINDAGNQIDNMAIS 179 Query: 181 VFWRYQQA---------LYNNDSD------------LPEGYYPGVYLKHVGKELADKYS- 218 + +R+Q+ N D PE Y G + K +A++ Sbjct: 180 IEYRFQELQGATLVFPPKRNEDGSMPEFDIPEGALVFPENGYRGPDIIETAKTIAEREGF 239 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 +L E + + K+ ++ + + + L + D + SE H + I ++ Sbjct: 240 DKLNAMNEADRVALFKEEGLKEKLARLEETLSNFRVTFDNWFSERTVH--EADEIHHSVE 297 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 L G VYE L +ST GDD DR +++ +G TY AAD+ Sbjct: 298 ALKALGKVYE----------------KDGALWLKSTDYGDDKDRVVIRDNGVPTYLAADI 341 Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 AY + KY+RGF MI + G+DH GYV R++A AA ++ VLL ++V L+RDG + Sbjct: 342 AYHRNKYDRGFKEMIDIWGADHHGYVCRVKAAMAAFGYDPDKLTVLLLQMVALFRDGQLV 401 Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 K+SKR+GD +TL +++EVG D+ R+ L R LDFD K +S +NPV+Y+QYA+ Sbjct: 402 KLSKRSGDSVTLDELIEEVGVDASRYFFLMRSLDSQLDFDINLAKSRSNDNPVYYIQYAH 461 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 AR SI+ Q ++ + + EL+LI LAEYP + + P Sbjct: 462 ARIHSIYNQVREAG----IAFGDYSETDFTTLTSEMELELIKKLAEYPEEVVQSAEHHAP 517 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 +++A YL+DLAS+FH + GR + + L RL L+ A+A ++ GL I+G Sbjct: 518 HRIARYLFDLASMFHSFYRQGR-------IIGVDPALQQARLGLITAIALVLRQGLGILG 570 Query: 579 VESPNEM 585 + +P +M Sbjct: 571 ISAPEKM 577 >gi|152965218|ref|YP_001361002.1| arginyl-tRNA synthetase [Kineococcus radiotolerans SRS30216] gi|189083537|sp|A6W7E9|SYR_KINRD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|151359735|gb|ABS02738.1| arginyl-tRNA synthetase [Kineococcus radiotolerans SRS30216] Length = 554 Score = 547 bits (1409), Expect = e-153, Method: Composition-based stats. Identities = 188/585 (32%), Positives = 300/585 (51%), Gaps = 38/585 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 A+ S+ L++ L ++ + + +ERP++ HG +T+ A+ L++ GL P Sbjct: 4 AELSAALRDALTAAVAAGELTLDPADVPAEVRVERPKNRDHGDWATSVALQLAKKAGLPP 63 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +A L+ R+ V +V IAG GF+N+ L + ++ S+V +G +GR+ G Sbjct: 64 REVAALVQRRLLEVEGVRAVDIAGPGFLNVTLDAAAAGELARSVVEAGPAFGRSATPTGE 123 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 ++N+EFVSANPTGP+H+G R A VGD+LA ++ +G VTREYY ND GAQI+ A S+ Sbjct: 124 RINLEFVSANPTGPIHLGGTRWAAVGDSLARVLEAAGATVTREYYFNDHGAQIDRFARSL 183 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 R ND PE Y G Y+ + + + + LL+ P E+ + + V+ M Sbjct: 184 LARA------NDEPAPEDGYGGDYVTDIAAAVLAE-APGLLDLPREEQQEVFRREGVELM 236 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 IR L ++ D++ ED H + + L G +YE Sbjct: 237 FAEIRQSLAEFGVEFDVYFHEDSLHT--SGAVGRAVQKLRDLGRIYEA------------ 282 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 R++ GDD DR ++KSDG Y + DLAY+ K ERGFD + ++G+DH Sbjct: 283 ----DGATWLRTSDFGDDKDRVVIKSDGHPAYISGDLAYYLDKRERGFDRCVLMLGADHH 338 Query: 362 GYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GYV R+ A+ AA + + +L+ ++V L +DG+P++MSKRAG +T+ +V+ VG D Sbjct: 339 GYVPRMMAMCAAFGDTPGVNLEILIGQMVNLLKDGVPVRMSKRAGTVVTMEDLVEAVGVD 398 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 + R+ ++ +D D + +S +NPVFYVQYA+A R A + Sbjct: 399 AARYSLVRSSVDSSIDIDLDLLTRRSNDNPVFYVQYAHA------RTANVAVNAAAAGVR 452 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 + + +E L+ LAE+P V+ A +EP+++A YL +LA FH + R Sbjct: 453 REDAFDPSLLTEETESLLLAALAEFPAVVARAGELREPHRVARYLEELAGRFHKFYDACR 512 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 PR + RL L A ++ +GL ++GV SP+ M Sbjct: 513 VTPR---AGEEVTDVHRTRLWLNDATRQVLANGLGLLGVSSPDRM 554 >gi|74318800|ref|YP_316540.1| arginyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259] gi|109895051|sp|Q3SF80|SYR_THIDA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|74058295|gb|AAZ98735.1| arginyl-tRNA synthetase, class Ic [Thiobacillus denitrificans ATCC 25259] Length = 557 Score = 547 bits (1409), Expect = e-153, Method: Composition-based stats. Identities = 195/587 (33%), Positives = 288/587 (49%), Gaps = 44/587 (7%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 +L ++ + + + + IERP++ HG S+NAAM L+RPL +P +A+ Sbjct: 7 LKDQLALLIEAALEALAPDAPV--SLEIERPKNPTHGDFSSNAAMQLARPLKRNPRELAQ 64 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 LIV + V IAG GFIN +L+P+ I+ + +G ++GR +V IE Sbjct: 65 LIVTELPASTLVAKADIAGAGFINFHLTPAAWHGIVRQVRTAGAQFGRAQRETPQRVLIE 124 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+HVGH R A +GD L +L A G++V RE+Y NDAG QI TLA SV R + Sbjct: 125 FVSANPTGPLHVGHGRQAALGDALCNLYAAQGWDVYREFYYNDAGVQIATLAASVQARAR 184 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDYSVQAM 241 L D+ PE Y G Y+ + ++ E + L ++ ++V + Sbjct: 185 -GLQPGDATWPEAAYNGDYIADIARDFLAGKTVKSDDREFTASGDVDDLDSIRQFAVAYL 243 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 DL+A + D + E + + + L G YE Sbjct: 244 RHEQDLDLRAFAVHFDNYYLESSLYT--DGRVDATVQRLVAAGKTYE------------- 288 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 L R+T GDD DR + KSDG+YTYF D+AY K+ERGF I + G+DH Sbjct: 289 ---QDGALWLRTTEYGDDKDRVMKKSDGTYTYFVPDVAYHIAKWERGFARAINIQGTDHH 345 Query: 362 GYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 G + R+ A A V + + LL +VR+ R G +K+SKRAG ++TLR +++ Sbjct: 346 GTIARVRAGLQAASVGIPEGYPDYLLHTMVRVMRGGEEVKISKRAGSYVTLRDLIEWTSK 405 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF-RQAKDIFPDLDFD 478 D+VRF +L RK FD ++ +NPV+YVQYA+AR +F + D+ D D Sbjct: 406 DAVRFFLLSRKADTEYVFDIDLALARNNDNPVYYVQYAHARICRVFEEWSGDVATLADAD 465 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L P EL L+ LAEYP + +A P+ L YL LA FH ++ Sbjct: 466 LAPLEAA--------HELALMQRLAEYPETVASAARDLAPHLLVHYLQMLAGDFHAWYNA 517 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + RL L A +I +GL ++GV++P +M Sbjct: 518 EKF-------LVADEATKRARLALADATRIVIVNGLALLGVDAPEKM 557 >gi|160914601|ref|ZP_02076815.1| hypothetical protein EUBDOL_00608 [Eubacterium dolichum DSM 3991] gi|158433141|gb|EDP11430.1| hypothetical protein EUBDOL_00608 [Eubacterium dolichum DSM 3991] Length = 547 Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats. Identities = 200/561 (35%), Positives = 302/561 (53%), Gaps = 37/561 (6%) Query: 26 KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV-DSVFIA 84 + + + IVIE PRD +HG STN AM L+R L +P IA+ I+ + D +S IA Sbjct: 23 ELVAEDIVIEIPRDLSHGDYSTNMAMQLTRILKNNPRVIAQGIIEHLDHDAANIESCEIA 82 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 G GFIN + + + +I++ ++ +G YG N GKG KVN+E+VSANPTG +H+GH R A Sbjct: 83 GPGFINFVIRKTSMAEIIARVLEAGDHYGENETGKGQKVNVEYVSANPTGDLHLGHARGA 142 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204 GD++ LM SGY+V REYY+NDAG QI L LS+ RY++ L D LPE Y G Sbjct: 143 AWGDSITRLMKASGYDVCREYYVNDAGNQIINLGLSLQARYREYL-GMDFTLPEDGYHGE 201 Query: 205 YLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 +K + LA +Y + L K+ ++ + I+ DL + D++ SE Sbjct: 202 DVKKIAIALAKEYGEAYAEEND-ANLKFFKEKGIEFELNKIKRDLDYFRVHFDVWSSEQA 260 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 D + + L +G YE + L F +T GDD DR L Sbjct: 261 I--RDAGKVETALAQLHEKGLTYE----------------EDGALWFATTKFGDDKDRVL 302 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 K DGSYTY D+AY K K +RGFD ++ ++G+DH GY+ RL+A A+ ++ V Sbjct: 303 RKKDGSYTYLVPDIAYHKDKLDRGFDLLVDLLGADHHGYIPRLKASIEALGNDPDKLQVD 362 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 + ++VRL +G +KMSKR G+ +T+R + DEVG D+VR+ + R DFD ++ Sbjct: 363 IIQMVRLVENGEEVKMSKRLGNAVTIRELCDEVGVDAVRYFFVQRAVDTHFDFDLGLARK 422 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 QS +NPV+Y QYA+AR SI RQA + P ++L E+ L+ ++ E Sbjct: 423 QSNDNPVYYAQYAHARICSILRQAPQLAPAQSYELLT----------HEKEIALMKYINE 472 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 + V+ +A + P+++ Y+ LA FH ++ + + NN L+ R+ L+ Sbjct: 473 FSGVVSDAAKYRAPHRVCNYVQKLAQHFHSFYNAC------KVIDMNNEALSAQRIALLK 526 Query: 565 AVASIINSGLNIIGVESPNEM 585 A + + L IGVE+ +M Sbjct: 527 ATKITLKNALAFIGVEATEKM 547 >gi|302529809|ref|ZP_07282151.1| arginyl-tRNA synthetase [Streptomyces sp. AA4] gi|302438704|gb|EFL10520.1| arginyl-tRNA synthetase [Streptomyces sp. AA4] Length = 554 Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats. Identities = 191/582 (32%), Positives = 296/582 (50%), Gaps = 32/582 (5%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 A + +++ ++ V+ +L + IERPR+ HG +TN A+ +++ GL P Sbjct: 4 AALADLVRSSAVQVLAARGVDAAVLPETVTIERPRNPDHGDYATNLALQVAKKAGLKPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 AE + + V + +AG GF+N L+ +++ ++ +G EYGR G ++ Sbjct: 64 FAEALAEVVAGADGVAAAEVAGPGFLNFRLAADAQGEVVRQVLAAGAEYGRGDALAGRRI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L ++ G +VTREYY NDAGAQI+ S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRVLGAQGADVTREYYFNDAGAQIDRFVRSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + E+ S L+ PE + + ++ M Sbjct: 184 AAK------GEPAPEDGYAGGYISDIAAEVLKAEPSA-LSLPEVQRHETFRRIGIELMFS 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L D++ E+ H + + + L G +Y Sbjct: 237 QIKQSLHEFGTDFDVYFHENSLH--ESGAVDAAVQQLKDSGNLYFA-------------- 280 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 +S+ GDD DR +LK DG+ Y A DLAYFK K RGFD IY++G+DH GY Sbjct: 281 --DGAWWLKSSEYGDDKDRVVLKKDGNPAYIAGDLAYFKDKRNRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA + A + VL+ ++V L DG P++MSKRAG ITL +V+ VG D R Sbjct: 339 IARLKAAAAAFGDDPATVEVLIGQMVNLVSDGKPVRMSKRAGTVITLEDLVEAVGVDPAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ LD D +++ S +NPV+YVQYA+AR S+ R A D+ +D + Sbjct: 399 YELIRYSVDSSLDIDLDLLRKHSNDNPVYYVQYAHARLSSLRRGAADLGLKVDESGADAD 458 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 +E LI + E+P V+ A +EP+++A YL +LA +H ++ GR P Sbjct: 459 FGLLTL---PAEGDLIRTIGEFPAVVRRAAEMREPHRVARYLEELAGAYHKFYTVGRVLP 515 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + LT RL L A ++ +GL+++GV +P M Sbjct: 516 QG---DEEATPLTYARLALCEAARQVLANGLSLLGVSAPERM 554 >gi|109894994|sp|Q39VQ6|SYR_GEOMG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS Length = 562 Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats. Identities = 197/592 (33%), Positives = 303/592 (51%), Gaps = 39/592 (6%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + S + ++ + + IVIE+P HG + AM +++ P Sbjct: 1 MKDRVRSLVAEGIERCFADGSLASNQMPAIVIEKPAHAEHGDFACTVAMSMAKAERKAPR 60 Query: 63 TIAELIVARIK--IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 IAE IV I+ + + IAG GFIN + + L+ + +G +GR+ G+ Sbjct: 61 VIAETIVKHIENGESGIIGGIDIAGPGFINFRIKNEAWSRTLAVVEAAGASFGRSCAGEE 120 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KV +EFVSANPTGP+H+GH R A +GDT+ L++ SG++VTRE+Y NDAGAQI LALS Sbjct: 121 RKVQVEFVSANPTGPLHIGHGRGAAIGDTICRLLSASGFDVTREFYYNDAGAQIANLALS 180 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVG-----KELADKYSSELLNFPEEKWLPIVKD 235 V R + D P Y G Y+K V +E D + + L ++ Sbjct: 181 VQSRCL-GIEPGDPRWPADGYQGDYIKDVARSYLNRETVDAGDQHVTAAGDPNDLDAIRR 239 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 ++V + + DL A ++ D++ E + + +++ L G+ +E Sbjct: 240 FAVAYLRREQDQDLLAFDVHFDVYSLESSLYT--EGRVEEVVRRLIENGHTFE------- 290 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 L R+T GDD DR + KSDGSYTYF D+AY K+ERGF +I Sbjct: 291 ---------QDGALWLRTTDFGDDKDRVMRKSDGSYTYFVPDVAYHLAKWERGFTRVINE 341 Query: 356 MGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 G+DH + R+ A A+ + +L ++V + R G +K+SKRAG ++TLR + Sbjct: 342 QGADHHSTITRVRAGLQALNAGIPQEWPEYVLHQMVTVMRGGEEVKISKRAGSYVTLRDL 401 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 +DEVG D+ RF L RK L FD K+QS ENPV+YVQYA+AR SIF A D Sbjct: 402 IDEVGRDATRFFFLMRKPDSQLVFDIDLAKQQSLENPVYYVQYAHARISSIFEAACDRGI 461 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 + +V E+ E++LI + +P VIE + ++ EP+++ +YL +LA FH Sbjct: 462 SVP-SFPDAHVDLLET---PEEIELIKLIGSFPEVIEGSALSFEPHRITYYLQELAGAFH 517 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ R V ++L+ RL L+ VA ++ +GL ++GV +P +M Sbjct: 518 SFYNKNR-------VIGEGKELSSARLFLLKGVAQVLKNGLALLGVSAPEKM 562 >gi|313894351|ref|ZP_07827916.1| arginine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412] gi|313441175|gb|EFR59602.1| arginine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412] Length = 577 Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats. Identities = 198/607 (32%), Positives = 307/607 (50%), Gaps = 52/607 (8%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + S ++ L++ + IV+E P G STN AM +R + Sbjct: 1 MEMKEILKSGIEQALQDTINSGGLPAGEYPEIVLEVPPQKEFGDFSTNIAMQSARVARQN 60 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P IAE +++ + D ++ +AG GFIN +L + L +I+ +G +YG + Sbjct: 61 PRAIAEALISHMNFD-WLERAEVAGAGFINFFLKSDMVYDTLKAILNAGDQYGVQPLRAR 119 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 + +E+VSANPTGP+HVGH R A G L +L+ +GY V EYYINDAG QI+ +A+S Sbjct: 120 DTIQVEYVSANPTGPLHVGHGRGAAYGSALVNLLRAAGYNVQSEYYINDAGNQIDNMAIS 179 Query: 181 VFWRYQQA---------LYNNDSD------------LPEGYYPGVYLKHVGKELADKYS- 218 + +R+Q+ N D PE Y G + K +A++ Sbjct: 180 IEYRFQELQGATLVFPPKRNEDGSMPEFDIPEGALVFPENGYRGPDIIETAKAIAEREGF 239 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 +L E + + K+ ++ + + + L+ + D + SE H + I I+ Sbjct: 240 DKLNAMNEADRIALFKEEGLKEKLARLEETLRNFRVTFDNWFSERTVH--ETEEIHHSIE 297 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 L G VYE L +ST GDD DR +++ +G TY AAD+ Sbjct: 298 ALKVLGKVYE----------------KNGALWLKSTDYGDDKDRVVIRDNGVPTYLAADI 341 Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 AY + KY+RGF MI + G+DH GYV R++A AA Q+ +LL ++V L+RDG + Sbjct: 342 AYHRSKYDRGFKEMIDIWGADHHGYVCRVKAAMAAFGYDPDQLTILLLQMVALFRDGELV 401 Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 K+SKR+GD +TL ++DEVG D+ R+ L R LDFD K +S +NPV+Y+QYA+ Sbjct: 402 KLSKRSGDSVTLDELIDEVGVDASRYFFLMRSLDSQLDFDINLAKSRSNDNPVYYIQYAH 461 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 AR SI+ Q ++ + + EL+LI LAEYP + + + P Sbjct: 462 ARIHSIYNQVREAG----IAFGDYSETDFTTLTSEMELELIKKLAEYPEEVVQSAEHRAP 517 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 +++A YLYDLAS+FH + GR + + L RL L+ A+A ++ GL I+G Sbjct: 518 HRIARYLYDLASMFHSFYRQGR-------IIGVDPALQQARLGLITAIALVLRQGLGILG 570 Query: 579 VESPNEM 585 + +P +M Sbjct: 571 ISAPEKM 577 >gi|15836752|ref|NP_297440.1| arginyl-tRNA synthetase [Xylella fastidiosa 9a5c] gi|9104936|gb|AAF82960.1|AE003868_6 arginyl-tRNA synthetase [Xylella fastidiosa 9a5c] Length = 586 Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats. Identities = 186/592 (31%), Positives = 301/592 (50%), Gaps = 37/592 (6%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 ++ A + + ++ + + L V+ERP+ HG +TN AM+LS+ G + Sbjct: 24 HVKAPLRALICQGIEALRSNGTLPTNTLPPDFVVERPKTRKHGDFATNVAMLLSKATGSN 83 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A+ +VA + D+ + IAG GFIN +L P ++ +++ +YGRNL G+ Sbjct: 84 PRLLAQTLVAALPTSADIARIEIAGPGFINFHLHPVAYQRETINVLKQDNDYGRNLSGQS 143 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 V +E+VSANPTGP+HVGH R A +GD LA L+ +G+ V RE+Y NDAG QI L S Sbjct: 144 RTVGVEYVSANPTGPLHVGHGRAAAIGDCLARLLEANGWNVKREFYYNDAGVQIENLVRS 203 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN-----FPEEKWLPIVKD 235 V R + L D+ P Y G Y+ + K S +++ + Sbjct: 204 VQARAR-GLKPGDAFWPTDAYNGEYIADIAKAYLAGDSINMVDTIITSTKNVDDTAAIHH 262 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 ++V + DL A N+ DI+ E ++ + + + L G+ YE Sbjct: 263 FAVNYLRNEQNHDLAAFNVDFDIYFLESSLYK--DGKVEETVQKLINSGHTYE------- 313 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 + L +ST GDD DR + KSDGSYTYF D+AY K++RG++ I Sbjct: 314 ---------EGGALWLKSTHFGDDKDRVMRKSDGSYTYFVPDIAYHLSKWQRGYERAITE 364 Query: 356 MGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 +G+DH G + R+ A A+ +L ++V + R G +K+SKR+G ++TLR + Sbjct: 365 LGADHHGSLARVHAGLQALEIGIPPGWPEYVLHQMVTVMRGGEEVKLSKRSGGYVTLRDL 424 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 ++E +D+ R+ ++ RK L FD +++S +NPVFYVQYAYAR S+ QA + Sbjct: 425 IEETSTDATRWFLIARKPDSQLTFDIDLARQKSNDNPVFYVQYAYARVCSLMHQAHEKNL 484 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 + D + + D + L L++ ++ YP +++ A EP+ +A YL +LA FH Sbjct: 485 NYDQ---TSGMASLDQLSDNTSLCLMIEISRYPEIVQIACELLEPHLIAQYLRELAHAFH 541 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + V N +L L A ++ +GLN++GV +P +M Sbjct: 542 TWYHNT-------PVLVENAVERNAKLTLACATRQVLANGLNLLGVGTPEKM 586 >gi|311898368|dbj|BAJ30776.1| putative arginyl-tRNA synthetase [Kitasatospora setae KM-6054] Length = 551 Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats. Identities = 193/565 (34%), Positives = 306/565 (54%), Gaps = 35/565 (6%) Query: 22 IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSV 81 ++ + + + +ERP++ HG +TN A+ L++P G P +AE++ R++ V V Sbjct: 21 GELTVDVPEHVTVERPKNRDHGDYATNVALQLAKPAGRPPRAVAEILAGRLRGITGVAKV 80 Query: 82 FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 IAG GF+N+ L + ++ +IV +G YGRN KG ++N+EFVSANPTGP+H+G Sbjct: 81 DIAGPGFLNITLDAATQGELARTIVEAGEAYGRNEALKGLRINLEFVSANPTGPIHIGGV 140 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYY 201 R A VGD+LA ++ +G EV+ EYY+NDAG QI A S+ N +PE Y Sbjct: 141 RWAAVGDSLARVLKATGAEVSTEYYLNDAGVQITKFAKSLKA------SANGQPVPEDGY 194 Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 G Y+ + K + + +L+ PE++ L + + ++ M+ I+ + + D + S Sbjct: 195 VGEYIADIAKAVT-EGVPGVLDLPEDEQLQVFRTEGLKLMVAEIQRSMAEFGVHFDTWFS 253 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E H D + I+ L QG+V++ + R+T GDD D Sbjct: 254 ERTLH--DSGAVEKAIERLREQGHVFD----------------REGAIWLRTTDFGDDKD 295 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ- 380 R L+K+DG TYFAAD AY+ K +RG + +Y++G+DH GYV RL+A+AA + + Sbjct: 296 RVLIKADGETTYFAADAAYYLSKRDRGAEVSVYMLGADHHGYVNRLKAIAACAGDDMDRN 355 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 I V++ + V++ RDG +++SKRAG+ IT+ VVD +G D+ R+M++ + + D Sbjct: 356 IEVMIGQFVKMLRDGKEVRLSKRAGNIITIDDVVDWIGVDAARYMLVRQSTDSTITIDID 415 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIV 500 V Q+ ENPVFYVQYA+AR ++ R A + D P E E L+ Sbjct: 416 VVTSQTAENPVFYVQYAHARMSAVQRNAVEKGITRSADFKP------ELLSSEWENDLLG 469 Query: 501 HLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRL 560 L E+PRV+ A +EP+ +A YL LA +H + + + P+ LT RL Sbjct: 470 QLGEFPRVLAKAGELREPHHVATYLEKLARSYHRFYDNCQILPKG---DEEVTDLTHARL 526 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 L A + + +GL ++GV +P M Sbjct: 527 WLADATRTTLANGLGLLGVSAPERM 551 >gi|328952027|ref|YP_004369361.1| Arginyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109] gi|328452351|gb|AEB08180.1| Arginyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109] Length = 556 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 201/586 (34%), Positives = 319/586 (54%), Gaps = 31/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + ++ + L+ + + ++ ++ P+ HG +TNAA++L++ + Sbjct: 1 MSMKKRVAALIMQALETLKSQALLDILETPSFQVDVPKLAEHGDFATNAALLLAKSVRRA 60 Query: 61 PLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +AELI + P + V IAG GFIN +L +Y ++L I +G YG++ +G Sbjct: 61 PRRVAELIRDNLNPPPGMLARVEIAGPGFINFFLEGTYWLQVLDDIASAGGTYGQSTMGA 120 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G V +EFVSANPTGP+HVGH R A +GD LA++++ +G+ V REYYIND G Q+ TL L Sbjct: 121 GKSVQVEFVSANPTGPLHVGHGRGAALGDALANILSATGHRVEREYYINDIGLQMQTLGL 180 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ R ++ L PE Y G Y+K + ++ +++ L P+ L Y+ + Sbjct: 181 SLLLRVKE-LQGEPVSFPENCYQGDYIKVLARQYLEQHGPISLEEPDAAALEAGGRYAGE 239 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 A++ IR DL + D + SE + + L +GY+YE Sbjct: 240 AILAGIRQDLADFGVHFDHWFSETRLFQDHD--LDHAFAALQERGYLYEA---------- 287 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 L F++T GD+ DR + + +G+ TYFA+D+ Y K++RGF +I + G+D Sbjct: 288 ------DGALWFKATAFGDEKDRVVRRQNGATTYFASDIGYHWQKFQRGFHQVIDIWGAD 341 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GYV RL+AV A+ ++ +LL +LV L R+G P+ M+ R G F+TLR V+DEVG Sbjct: 342 HHGYVPRLKAVVQALGIPAERLTILLVQLVSLLREGEPVAMTTRGGTFVTLREVMDEVGK 401 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ RF+ L R+ L+FD K+QS ENPV+YVQYA+AR S+FR A++ + D Sbjct: 402 DAARFIFLSRRADAHLEFDLELAKQQSNENPVYYVQYAHARLASVFRLAQEKGLAGEADQ 461 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 E+ L+ LA YP V+E A EP+++ ++L +LA HG++ Sbjct: 462 SA----NLTRLTLPEEITLLKLLATYPEVVEAAAFHLEPHRITYFLTELAGQLHGYYYRH 517 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R +++ L+ RL+LV + +I+ GL ++GVE+P M Sbjct: 518 RF-------ISDDADLSRARLRLVRGIKTILAHGLGLLGVEAPENM 556 >gi|58580117|ref|YP_199133.1| arginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331] gi|58424711|gb|AAW73748.1| arginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331] Length = 590 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 191/592 (32%), Positives = 308/592 (52%), Gaps = 37/592 (6%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 ++ A + + ++ + + L V+ERP+ HG +TNAAM+L++ + Sbjct: 28 HVKALLRALIGQGIEALRANGTLPGDTLPPDFVVERPKTREHGDFATNAAMLLAKAARSN 87 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A+ ++ + DV V IAG GFIN +L+P+ ++ ++ ++ G +YGR L G G Sbjct: 88 PRALAQALLTALPDSNDVTKVEIAGPGFINFHLAPTAYQREVAHVIKQGHDYGRGLAGNG 147 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 V +E+VSANPTGP+HVGH R A +GD+LA ++ +G+ V RE+Y NDAG QI LALS Sbjct: 148 RSVGVEYVSANPTGPLHVGHGRAAAIGDSLARVLDANGWNVKREFYYNDAGVQIENLALS 207 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKD 235 V R Q L + + PE Y G Y+ V D + + L ++ Sbjct: 208 VQAR-AQGLTPDSAGWPENGYRGDYIADVANAYLTGDTVDMEGHLVTGTKDPADLESIRR 266 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 ++V + DL A + DI+ E ++ + + + L G+ YE Sbjct: 267 FAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK--DGKVEEAVQKLIASGHTYE------- 317 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 + L +ST GDD DR + KSDG+YTYF D+AY K++RG++ I Sbjct: 318 ---------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGYERAITE 368 Query: 356 MGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 +G+DH G + R+ A A+ + +L ++V + RDG +K+ KRAG ++TLR + Sbjct: 369 LGADHHGSLTRVRAGLQAMELGIPQGWPEYVLHQMVTVMRDGEEVKLGKRAGGYVTLRDL 428 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 ++E +D+VR+ ++ RK L FD + QS +NPVFYVQYA+AR S+ RQA++ Sbjct: 429 IEETSADAVRWFLIARKPDSQLTFDIDLARAQSNDNPVFYVQYAHARVCSVLRQAQEKGY 488 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 D + D L +++ L+ YP V+E A EPY++A YL +LA FH Sbjct: 489 KYDQ---VHGLAELARLDDEHSLAVMLELSRYPEVVEIAGQTLEPYQIAQYLRELAHAFH 545 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + V ++ +L L A ++ +GL ++GV +P +M Sbjct: 546 TWYHNSK-------VLVDDAAERDAKLTLAVATQQVLANGLELLGVSAPEKM 590 >gi|158312858|ref|YP_001505366.1| arginyl-tRNA synthetase [Frankia sp. EAN1pec] gi|229558759|sp|A8L3U5|SYR_FRASN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|158108263|gb|ABW10460.1| arginyl-tRNA synthetase [Frankia sp. EAN1pec] Length = 570 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 199/594 (33%), Positives = 308/594 (51%), Gaps = 40/594 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 A+ + + ++ +E + D + +ERPR HG ++ A+ L++ P + Sbjct: 4 AELADTIVAAVRAAVANGDLEVAVPDSVTVERPRQPEHGDYASPVALQLAKAARRRPREV 63 Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 AEL+ AR++ + V V +AG GF+N+ L+ + L I IV G YGR + +G +VN Sbjct: 64 AELLAARLRAEAGVAEVEVAGPGFLNIRLAGAALGGIARRIVRDGESYGRAAVSQGVRVN 123 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGP+ + R A VGD L+ + A +GYEV EYY+NDAG Q+ SV Sbjct: 124 LEFVSANPTGPVTLASARWAAVGDALSRVFAAAGYEVGTEYYVNDAGVQVERFGASVLA- 182 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKE-----------LADKYSSELLNFPEEKWLPIV 233 AL + P Y G Y+ + + LA + ++K L + Sbjct: 183 ---ALRGQPA--PADGYQGAYVAEIAAKVLAANPALEQLLAASGGEQDSGAEQDKALAVC 237 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 V+ M+ IR L +++D++ SE H + + ID L QG+VYE Sbjct: 238 ARDGVELMLAEIRATLSGFGVEYDLWKSERSLH--EAGELIAAIDELRTQGHVYEA---- 291 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353 + R+T GDD DR L+KSDG TYF AD AY++ K RGFD + Sbjct: 292 ------------GGAVWLRTTDFGDDKDRALIKSDGRPTYFCADAAYYRDKRRRGFDRLC 339 Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412 Y++G+DH GY+ RL+A++A + ++VL+ ++V L R G+ +KMSKRAG+F+TL Sbjct: 340 YLLGADHHGYIGRLKAISACFGDDPDHNLDVLIGQMVTLSRGGVAVKMSKRAGNFLTLHD 399 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 +VD VG D+ R+ ++ LD D + Q+ +NPVFYVQYA+AR S+ R A + Sbjct: 400 LVDAVGVDAARYSLVRASMDSALDLDLDAIARQTNDNPVFYVQYAHARISSLIRNAAALG 459 Query: 473 PDLDFD-LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 D F + + E+ L+ L E PRV+E+A + P+++A YL +LA Sbjct: 460 LATSADPAFDVDGVDVSLLTHPREVDLLGALGELPRVVESAAELRAPHRIARYLEELAGT 519 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +H + R P+ +T RL L A +++ +GL ++GV +P M Sbjct: 520 YHRFYDSCRVLPQG---DEEPTAITAARLLLAEATRTVLANGLRLLGVSAPERM 570 >gi|270159345|ref|ZP_06188001.1| arginyl-tRNA synthetase [Legionella longbeachae D-4968] gi|289165835|ref|YP_003455973.1| arginine tRNA synthetase [Legionella longbeachae NSW150] gi|269987684|gb|EEZ93939.1| arginyl-tRNA synthetase [Legionella longbeachae D-4968] gi|288859008|emb|CBJ12936.1| arginine tRNA synthetase [Legionella longbeachae NSW150] Length = 586 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 204/611 (33%), Positives = 330/611 (54%), Gaps = 61/611 (9%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 LK+ L + ++ + I I+R +D AHG ++N A++L++P P IAE Sbjct: 5 VEQLLKHALISLQKSGEMPDNLDVEIKIDRAKDSAHGDYASNLALVLAKPCRQSPRKIAE 64 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 L+V I DP V+ + IAG GFIN ++ + KI++ + G +G + IGK KV +E Sbjct: 65 LLVKAIPADPVVEKIEIAGAGFINFFIHSNSRSKIIAEALEKGNRFGCSTIGKNQKVLVE 124 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+HVGH R A G TL +++ +GY+VT EYY+NDAG Q+N LA SV+ RY Sbjct: 125 FVSANPTGPLHVGHGRGAAFGATLGNVLKAAGYDVTVEYYVNDAGRQMNILAASVWLRYL 184 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN--------FPEEK---------- 228 + L +P Y G Y+ + +EL K++ E ++ P ++ Sbjct: 185 E-LSGEPVAIPANAYKGDYVSEIAQELWLKHNREYVHPWATVIEGLPLDEPHGGDKEIYI 243 Query: 229 --------------WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIR 274 + +++ +++ I+DDL +++D + SE + I+ Sbjct: 244 DALVARMKILLSMPVFSLFHQHALNTVLEDIQDDLAEFGVKYDNWFSEQSLF--EDGSIQ 301 Query: 275 DIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYF 334 I L G+ +E L FR+T GD+ DR L++++G TYF Sbjct: 302 KGIQALKDSGHTFE----------------KEGALWFRATDFGDEKDRVLVRANGHTTYF 345 Query: 335 AADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRD 394 A+D+AY KY+RG+D +I + G+DH GY+ RL AV A+ ++ ++VLL + LYR Sbjct: 346 ASDVAYHWNKYDRGYDRIIDIFGADHHGYITRLRAVVKALGHDESTLDVLLVQFAILYRG 405 Query: 395 GMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454 ++MS R+G F+TLR + EVG+D+ RF + RK+ + +DFD K +S +NPV+Y+ Sbjct: 406 VERVQMSTRSGSFVTLRELRQEVGNDAARFFYVARKSEQHMDFDLDLAKSESNDNPVYYI 465 Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514 QYA+AR S+ RQ K+ D + +++ E E +T LI ++ YP V+E A + Sbjct: 466 QYAHARICSVLRQLKERGLFWDQAMGLKHLDLLEQEHETH---LISLISRYPEVVELAAV 522 Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 EP+++A+YL ++A+ H +++ + +L RL L+ AV +I +GL Sbjct: 523 HCEPHQVAYYLREVANGLHSYYNAV-------PLLCEQEQLRCARLCLLEAVRQVIYNGL 575 Query: 575 NIIGVESPNEM 585 ++GV +P M Sbjct: 576 GLLGVSAPESM 586 >gi|167835227|ref|ZP_02462110.1| arginyl-tRNA synthetase [Burkholderia thailandensis MSMB43] Length = 594 Score = 546 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 200/615 (32%), Positives = 315/615 (51%), Gaps = 65/615 (10%) Query: 7 FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 + L+N +K++ K + +L I +ERP+ AHG ++ N A+ L++PLG +P Sbjct: 9 LETLLENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQ 68 Query: 64 IAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +AE IVA + P VD+ IAG GFINL L+P+ + ++ ++ G +G + + Sbjct: 69 LAERIVAALTTQPAAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVFAEGRAFGASERER 128 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA+ Sbjct: 129 GKRVLLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAI 188 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233 S R + L D+ PE Y G Y+ + ++ A + + + L + Sbjct: 189 STQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRDAEDLEAI 247 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 + ++V + + DLKA ++ D + E + + +D L G YE Sbjct: 248 RKFAVAYLRREQDMDLKAFGVKFDQYYLESSLYT--EGRVEKTVDALIEAGMTYE----- 300 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353 L R+T GDD DR + K+DG+YTYF D+AY K+ERGF +I Sbjct: 301 -----------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVI 349 Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+R Sbjct: 350 NIQGSDHHGTIARVRAGLQGLHVGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVR 409 Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 +++ G D+VRF ++ RK FD +Q+ ENP Sbjct: 410 DLIEWSGGATPGSEASPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+YVQYA+AR S+ + K + D L + P +S+ + L+ LAEYP V+ Sbjct: 470 VYYVQYAHARICSVLNEWKSRYGATDALLPGAELSPLDSK---QAMALMQKLAEYPDVLA 526 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A P+ +AFYL +LAS FH ++ R V + R+ L+ A ++ Sbjct: 527 HAANELAPHAVAFYLRELASEFHSFYNAER-------VLVDEEAPRTARVALLAATRQVL 579 Query: 571 NSGLNIIGVESPNEM 585 +GL ++GV +P++M Sbjct: 580 ENGLAMLGVSAPSKM 594 >gi|71275891|ref|ZP_00652174.1| Arginyl-tRNA synthetase, class Ic [Xylella fastidiosa Dixon] gi|71901382|ref|ZP_00683475.1| Arginyl-tRNA synthetase, class Ic [Xylella fastidiosa Ann-1] gi|71163268|gb|EAO12987.1| Arginyl-tRNA synthetase, class Ic [Xylella fastidiosa Dixon] gi|71728841|gb|EAO30979.1| Arginyl-tRNA synthetase, class Ic [Xylella fastidiosa Ann-1] Length = 562 Score = 546 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 186/591 (31%), Positives = 300/591 (50%), Gaps = 37/591 (6%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 + A + + ++ + + L V+ERP+ HG +TN AM+LS+ G +P Sbjct: 1 MKAPLRALICQGIEALRSNGTLPTNTLPPDFVVERPKTRKHGDFATNVAMLLSKATGSNP 60 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +A+ +VA + D+ + IAG GFIN +L P + +++ +YGRNL G+ Sbjct: 61 RLLAQTLVAALPTSADIARIEIAGPGFINFHLHPVAYQHETINVLKQDNDYGRNLSGQSR 120 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 V +E+VSANPTGP+HVGH R A +GD LA L+ +G+ V RE+Y NDAG QI+ L SV Sbjct: 121 TVGVEYVSANPTGPLHVGHGRAAAIGDCLARLLEANGWNVKREFYYNDAGVQIDNLVRSV 180 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN-----FPEEKWLPIVKDY 236 R + L D+ P Y G Y+ + K S +++ + + Sbjct: 181 QARAR-GLKPGDALWPTDAYNGEYIADIAKAYLAGDSINMVDTIITSTKNVDDTAAIHHF 239 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 +V + DL A N+ DI+ E ++ + + + L G+ YE Sbjct: 240 AVNYLRNEQNHDLAAFNVDFDIYFLESSLYK--DGKVEETVQKLINSGHTYE-------- 289 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + L +ST GDD DR + KSDGSYTYF D+AY K++RG++ I + Sbjct: 290 --------EGGALWLKSTHFGDDKDRVMRKSDGSYTYFVPDIAYHLSKWQRGYERAITEL 341 Query: 357 GSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414 G+DH G + R+ A A+ +L ++V + R G +K+SKR+G ++TLR ++ Sbjct: 342 GADHHGSLARVHAGLQALEIGIPPGWPEYVLHQMVTVMRGGEEVKLSKRSGGYVTLRDLI 401 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 +E +D+ R+ ++ RK L FD +++S +NPVFYVQYAYAR S+ QA + + Sbjct: 402 EETSTDATRWFLIARKPDSQLTFDIDLARQKSNDNPVFYVQYAYARVCSLMHQAHEKNLN 461 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 D + + D + L L++ ++ YP +++ A EP+ +A YL +LA FH Sbjct: 462 YDQ---TSGMASLDQLSDNTSLCLMIEISRYPEIVQIACELLEPHLIAQYLRELAHAFHT 518 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + V N +L L A ++ +GLN++GV +P +M Sbjct: 519 WYHNT-------PVLVENAVERNAKLTLACATRQVLANGLNLLGVGTPEKM 562 >gi|254187942|ref|ZP_04894454.1| arginyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237] gi|254196876|ref|ZP_04903300.1| arginyl-tRNA synthetase [Burkholderia pseudomallei S13] gi|157935622|gb|EDO91292.1| arginyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237] gi|169653619|gb|EDS86312.1| arginyl-tRNA synthetase [Burkholderia pseudomallei S13] Length = 594 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 200/615 (32%), Positives = 318/615 (51%), Gaps = 65/615 (10%) Query: 7 FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 + L+N +K++ K + +L I +ERP+ AHG ++ N A+ L++PLG +P Sbjct: 9 LETLLENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQ 68 Query: 64 IAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +AE IVA + P+ VD+ IAG GFINL L+P+ + ++ +++ G +G + Sbjct: 69 LAEQIVAALTAQPEAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVLAQGRAFGASERDH 128 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA+ Sbjct: 129 GKRVLLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAI 188 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233 S R + L D+ PE Y G Y+ + ++ A + + + L + Sbjct: 189 STQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRDVEDLEAI 247 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 + ++V + + DLKA ++ D + E + + +D L G YE Sbjct: 248 RKFAVTYLRREQDMDLKAFGVKFDQYYLESSLYT--EGRVEKTVDALTAAGMTYE----- 300 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353 L R+T GDD DR + K+DG+YTYF D+AY K+ERGF +I Sbjct: 301 -----------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVI 349 Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+R Sbjct: 350 NIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVR 409 Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 +++ G D+VRF ++ RK FD +Q+ ENP Sbjct: 410 DLIEWSGGATPGSEGSPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+YVQYA+AR S+ + K + D L ++ P +S+ + L+ LAEYP V+ Sbjct: 470 VYYVQYAHARICSVINEWKSRYGATDALLPGADLSPLDSK---QAMALMQKLAEYPDVLA 526 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A P+ +AFYL +LAS FH ++ R V + + R+ L+ A ++ Sbjct: 527 HAAGELAPHAVAFYLRELASEFHSFYNAER-------VLVDEQAPRTARVALLAATRQVL 579 Query: 571 NSGLNIIGVESPNEM 585 +GL ++GV +P++M Sbjct: 580 ENGLAMLGVSAPSKM 594 >gi|258592259|emb|CBE68568.1| arginyl-tRNA synthetase [NC10 bacterium 'Dutch sediment'] Length = 557 Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats. Identities = 206/585 (35%), Positives = 311/585 (53%), Gaps = 34/585 (5%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L + L +K+ + + + + E P D G LST A L++ L P Sbjct: 5 LKTRLTEALLTTIKQSGFEAGLPQGASTPMTWEYPSDPVFGDLSTTLAFGLAKALRQRPR 64 Query: 63 TIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 IA I A VD V +AG G++N +++ + R + I+ +G YGR +G G Sbjct: 65 DIAMQIAASAAFPSDLVDRVEVAGAGYLNFFIARPFWRHLAQEILRAGPTYGRADVGGGR 124 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 V +EFVSANPTGP+ V + R A +GD +A L+ G+ REYY+NDAG Q TLAL++ Sbjct: 125 PVLVEFVSANPTGPLVVVNARAAAIGDAIARLLEAIGHRPYREYYVNDAGNQFRTLALAM 184 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 R +Q L D +PE YPG YL + +E D++ E+L+ PE + + ++V+ + Sbjct: 185 EVRCRQ-LQGEDCPMPEEAYPGEYLIDLAREFLDQHGPEVLSAPEPERRDRLGRFAVERI 243 Query: 242 MKIIRDDLKALNIQHDIFISEDDF-HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 ++ R L+A + D + SE + RGD + + I+ L + ++YE Sbjct: 244 IEWQRASLEAYGVTFDGWFSERNLRERGDTTQV---IEALKARSFLYE------------ 288 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + FRST+ GDD DR L+K DG TYF D+AY + K+ RGF +I + G DH Sbjct: 289 ----QDGAVWFRSTLFGDDKDRVLVKGDGEITYFLPDIAYHQDKFARGFAQVIDLWGPDH 344 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GYV R++A A+ + +L+ +LVRL R ++MSKRAG F+T+ +VDEVG D Sbjct: 345 HGYVPRMQAAMQALGHPPGALKILIVQLVRLMRGTEQVRMSKRAGQFVTMGELVDEVGRD 404 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 + R+ L R+ LDFD VK S+ENPV+YVQYA+ R I R+A + Sbjct: 405 AARYTFLTRRCDSQLDFDLELVKSASEENPVYYVQYAHTRLCGILREATRAQLPV----- 459 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 P + E+ LI LA YP ++ A A EP++L YL+DLA+ FHG+++ R Sbjct: 460 PSPEDNLDRLDLPEEIGLIKQLALYPELVIGAAQALEPHRLTTYLHDLAAQFHGYYARHR 519 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + LT RL LV A+ ++ + L ++GV +P M Sbjct: 520 -------IISADTNLTRARLTLVAALRVVMANTLGLLGVSAPERM 557 >gi|23822211|sp|Q9PGZ9|SYR_XYLFA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS Length = 562 Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats. Identities = 186/591 (31%), Positives = 300/591 (50%), Gaps = 37/591 (6%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 + A + + ++ + + L V+ERP+ HG +TN AM+LS+ G +P Sbjct: 1 MKAPLRALICQGIEALRSNGTLPTNTLPPDFVVERPKTRKHGDFATNVAMLLSKATGSNP 60 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +A+ +VA + D+ + IAG GFIN +L P ++ +++ +YGRNL G+ Sbjct: 61 RLLAQTLVAALPTSADIARIEIAGPGFINFHLHPVAYQRETINVLKQDNDYGRNLSGQSR 120 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 V +E+VSANPTGP+HVGH R A +GD LA L+ +G+ V RE+Y NDAG QI L SV Sbjct: 121 TVGVEYVSANPTGPLHVGHGRAAAIGDCLARLLEANGWNVKREFYYNDAGVQIENLVRSV 180 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN-----FPEEKWLPIVKDY 236 R + L D+ P Y G Y+ + K S +++ + + Sbjct: 181 QARAR-GLKPGDAFWPTDAYNGEYIADIAKAYLAGDSINMVDTIITSTKNVDDTAAIHHF 239 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 +V + DL A N+ DI+ E ++ + + + L G+ YE Sbjct: 240 AVNYLRNEQNHDLAAFNVDFDIYFLESSLYK--DGKVEETVQKLINSGHTYE-------- 289 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + L +ST GDD DR + KSDGSYTYF D+AY K++RG++ I + Sbjct: 290 --------EGGALWLKSTHFGDDKDRVMRKSDGSYTYFVPDIAYHLSKWQRGYERAITEL 341 Query: 357 GSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414 G+DH G + R+ A A+ +L ++V + R G +K+SKR+G ++TLR ++ Sbjct: 342 GADHHGSLARVHAGLQALEIGIPPGWPEYVLHQMVTVMRGGEEVKLSKRSGGYVTLRDLI 401 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 +E +D+ R+ ++ RK L FD +++S +NPVFYVQYAYAR S+ QA + + Sbjct: 402 EETSTDATRWFLIARKPDSQLTFDIDLARQKSNDNPVFYVQYAYARVCSLMHQAHEKNLN 461 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 D + + D + L L++ ++ YP +++ A EP+ +A YL +LA FH Sbjct: 462 YDQ---TSGMASLDQLSDNTSLCLMIEISRYPEIVQIACELLEPHLIAQYLRELAHAFHT 518 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + V N +L L A ++ +GLN++GV +P +M Sbjct: 519 WYHNT-------PVLVENAVERNAKLTLACATRQVLANGLNLLGVGTPEKM 562 >gi|28198052|ref|NP_778366.1| arginyl-tRNA synthetase [Xylella fastidiosa Temecula1] gi|71899271|ref|ZP_00681433.1| Arginyl-tRNA synthetase, class Ic [Xylella fastidiosa Ann-1] gi|182680680|ref|YP_001828840.1| arginyl-tRNA synthetase [Xylella fastidiosa M23] gi|32130169|sp|Q87F22|SYR_XYLFT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|238691058|sp|B2I6M4|SYR_XYLF2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|28056112|gb|AAO28015.1| arginyl-tRNA synthetase [Xylella fastidiosa Temecula1] gi|71731004|gb|EAO33073.1| Arginyl-tRNA synthetase, class Ic [Xylella fastidiosa Ann-1] gi|182630790|gb|ACB91566.1| arginyl-tRNA synthetase [Xylella fastidiosa M23] gi|307579142|gb|ADN63111.1| arginyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 562 Score = 544 bits (1403), Expect = e-152, Method: Composition-based stats. Identities = 186/591 (31%), Positives = 300/591 (50%), Gaps = 37/591 (6%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 + A + + ++ + + L V+ERP+ HG +TN AM+LS+ G +P Sbjct: 1 MKAPVRALICQGIEALRSNGTLPTNTLPPDFVVERPKTRKHGDFATNVAMLLSKATGSNP 60 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +A+ +VA + D+ + IAG GFIN +L P ++ +++ +YGRNL G+ Sbjct: 61 RLLAQTLVAALPTSADIARIEIAGPGFINFHLHPVAYQRETINVLKQDNDYGRNLSGQSR 120 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 V +E+VSANPTGP+HVGH R A +GD LA L+ +G+ V RE+Y NDAG QI L SV Sbjct: 121 TVGVEYVSANPTGPLHVGHGRAAAIGDCLARLLEANGWNVKREFYYNDAGVQIENLVRSV 180 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN-----FPEEKWLPIVKDY 236 R + L D+ P Y G Y+ + K S +++ + + Sbjct: 181 QARAR-GLKPGDALWPTDAYNGEYIADIAKAYLAGDSINMVDTIITSTKNVDDTAAIHHF 239 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 +V + DL A N+ DI+ E ++ + + + L G+ YE Sbjct: 240 AVNYLRNEQNHDLAAFNVDFDIYFLESSLYK--DGKVEETVQKLINSGHTYE-------- 289 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + L +ST GDD DR + KSDGSYTYF D+AY K++RG++ I + Sbjct: 290 --------EGGALWLKSTHFGDDKDRVMRKSDGSYTYFVPDIAYHLSKWQRGYERAITEL 341 Query: 357 GSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414 G+DH G + R+ A A+ +L ++V + R G +K+SKR+G ++TLR ++ Sbjct: 342 GADHHGSLARVHAGLQALEIGIPPGWPEYVLHQMVTVMRGGEEVKLSKRSGGYVTLRDLI 401 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 +E +D+ R+ ++ RK L FD +++S +NPVFYVQYAYAR S+ QA + + Sbjct: 402 EETSTDATRWFLIARKPDSQLTFDIDLARQKSNDNPVFYVQYAYARVCSLMHQAHEKNLN 461 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 D + + D + L L++ ++ YP +++ A EP+ +A YL +LA FH Sbjct: 462 YDQ---TSGMASLDQLSDNTSLCLMIEISRYPEIVQIACELLEPHLIAQYLRELAHAFHT 518 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + V N +L L A ++ +GLN++GV +P +M Sbjct: 519 WYHNT-------PVLVENAVERNAKLTLACATRQVLANGLNLLGVGTPEKM 562 >gi|53718023|ref|YP_107009.1| arginyl-tRNA synthetase [Burkholderia pseudomallei K96243] gi|126438772|ref|YP_001057463.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 668] gi|126452586|ref|YP_001064713.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 1106a] gi|134279771|ref|ZP_01766483.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 305] gi|167717831|ref|ZP_02401067.1| arginyl-tRNA synthetase [Burkholderia pseudomallei DM98] gi|167813955|ref|ZP_02445635.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 91] gi|167822473|ref|ZP_02453944.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 9] gi|167909276|ref|ZP_02496367.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 112] gi|226200340|ref|ZP_03795884.1| arginine--tRNA ligase [Burkholderia pseudomallei Pakistan 9] gi|237810613|ref|YP_002895064.1| arginine--tRNA ligase [Burkholderia pseudomallei MSHR346] gi|242315778|ref|ZP_04814794.1| arginine--tRNA ligase [Burkholderia pseudomallei 1106b] gi|254182011|ref|ZP_04888608.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 1655] gi|81380564|sp|Q63Y06|SYR_BURPS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|166232767|sp|A3NQU2|SYR_BURP0 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|166232768|sp|A3N542|SYR_BURP6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|52208437|emb|CAH34371.1| putative arginyl-tRNA synthetase [Burkholderia pseudomallei K96243] gi|126218265|gb|ABN81771.1| arginine--tRNA ligase [Burkholderia pseudomallei 668] gi|126226228|gb|ABN89768.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 1106a] gi|134248971|gb|EBA49053.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 305] gi|184212549|gb|EDU09592.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 1655] gi|225927662|gb|EEH23705.1| arginine--tRNA ligase [Burkholderia pseudomallei Pakistan 9] gi|237503627|gb|ACQ95945.1| arginine--tRNA ligase [Burkholderia pseudomallei MSHR346] gi|242139017|gb|EES25419.1| arginine--tRNA ligase [Burkholderia pseudomallei 1106b] Length = 594 Score = 544 bits (1403), Expect = e-152, Method: Composition-based stats. Identities = 200/615 (32%), Positives = 318/615 (51%), Gaps = 65/615 (10%) Query: 7 FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 + L+N +K++ K + +L I +ERP+ AHG ++ N A+ L++PLG +P Sbjct: 9 LETLLENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQ 68 Query: 64 IAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +AE IVA + P+ VD+ IAG GFINL L+P+ + ++ +++ G +G + Sbjct: 69 LAEQIVAALTAQPEAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVLAQGRAFGASERDH 128 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA+ Sbjct: 129 GKRVLLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAI 188 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233 S R + L D+ PE Y G Y+ + ++ A + + + L + Sbjct: 189 STQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRDVEDLEAI 247 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 + ++V + + DLKA ++ D + E + + +D L G YE Sbjct: 248 RKFAVTYLRREQDMDLKAFGVKFDQYYLESSLYT--EGRVEKTVDALIAAGMTYE----- 300 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353 L R+T GDD DR + K+DG+YTYF D+AY K+ERGF +I Sbjct: 301 -----------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVI 349 Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+R Sbjct: 350 NIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVR 409 Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 +++ G D+VRF ++ RK FD +Q+ ENP Sbjct: 410 DLIEWSGGATPGSEGSPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+YVQYA+AR S+ + K + D L ++ P +S+ + L+ LAEYP V+ Sbjct: 470 VYYVQYAHARICSVINEWKSRYGATDALLPGADLSPLDSK---QAMALMQKLAEYPDVLA 526 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A P+ +AFYL +LAS FH ++ R V + + R+ L+ A ++ Sbjct: 527 HAAGELAPHAVAFYLRELASEFHSFYNAER-------VLVDEQAPRTARVALLAATRQVL 579 Query: 571 NSGLNIIGVESPNEM 585 +GL ++GV +P++M Sbjct: 580 ENGLAMLGVSAPSKM 594 >gi|302038582|ref|YP_003798904.1| arginyl-tRNA synthetase [Candidatus Nitrospira defluvii] gi|300606646|emb|CBK42979.1| Arginyl-tRNA synthetase [Candidatus Nitrospira defluvii] Length = 584 Score = 544 bits (1402), Expect = e-152, Method: Composition-based stats. Identities = 201/600 (33%), Positives = 309/600 (51%), Gaps = 42/600 (7%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 S L L+ + ++ + + I +E P+ G +S AM LS P I Sbjct: 8 DKVSQALVGALRSAQQRGMLKLEQMPTINLEAPKRPEWGDVSCTVAMSLSASERRPPFEI 67 Query: 65 AELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 A++IV I+ D IA GF+NL + +L I G YG +L+G+G +V Sbjct: 68 AQIIVDHIEQRDALFSRAEIARPGFLNLTVKRELWMDVLREIEAQGERYGHSLVGRGRRV 127 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +E+VSANPTGP+HVGH R A VG L L+ +G++V EYYINDAG Q+ L LSV Sbjct: 128 LVEYVSANPTGPLHVGHGRGAAVGQALVRLLRATGHDVVSEYYINDAGRQMKLLGLSVLA 187 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 RY++A PE Y G Y++ V + + + LL+ P +D++ + ++ Sbjct: 188 RYREAC-GQPVSFPEDGYHGGYIRTVAEHVKAEQGVVLLSLPAADAEQRSRDFAYRELLA 246 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 +IR DL+ I + + SE + ++ L + +++ Sbjct: 247 LIRQDLETFGIAFESWFSEASL--LSSGAVEQVLSELRARDLLFD--------------- 289 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 FRS+ GD+ DR + K +G YTY A+D+AY + K RGFD ++ V G+DH GY Sbjct: 290 -QEGAQWFRSSAFGDEKDRVVRKQEGDYTYLASDIAYHRDKLRRGFDLLVDVWGADHHGY 348 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + R++AV A K ++ V+L ++V L R G ++MSKR+G+FITLR V+DEVG+D+ + Sbjct: 349 IPRMQAVVQAYGYPKERLRVVLVQMVNLLRGGQKVEMSKRSGEFITLREVMDEVGADAAK 408 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 F L R +S LDFD K+QS+ENPV+YVQY +AR S+ R A + Sbjct: 409 FFFLMRDSSTHLDFDLELAKQQSQENPVYYVQYVHARIASLRRVAASRGIACPL----PS 464 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN- 542 D EL LI L+ +P V++ + + EP+++A+YL +LA + H ++ R Sbjct: 465 QADLNVLEDPDELALIRKLSAFPVVLQASAVELEPHRMAYYLRELAGMVHPFYNKHRILP 524 Query: 543 -----------------PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P R +A LT RL L+ AV ++ +GLN++GV +P +M Sbjct: 525 PAPDSEAVTAASTEQVAPSARTAEAMTPGLTGARLALMWAVQQVVRNGLNVLGVSAPEQM 584 >gi|217967868|ref|YP_002353374.1| arginyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724] gi|217336967|gb|ACK42760.1| arginyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724] Length = 550 Score = 544 bits (1402), Expect = e-152, Method: Composition-based stats. Identities = 206/582 (35%), Positives = 319/582 (54%), Gaps = 35/582 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKIL---DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 + +K+ +K ++ + I++E P+ +G +T A+ +++ P Sbjct: 1 MRKHIYELIKKAVNSLKEKENFIVDDIEIIVETPKQKEYGDYATAVALQIAQKNKKPPRV 60 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +AE I IK P V + IAG GFIN +L+ L + L ++ I+ + K K+ Sbjct: 61 VAEKISEYIKKSPFVKKIEIAGPGFINFFLNDEALWETLR-LIRKDIDDFVKIPSKKKKI 119 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 IEF S NPTGPMH+ H R +GD+LA+L G+ +E+YINDAG QI+ L S++ Sbjct: 120 QIEFGSINPTGPMHIAHARGVTIGDSLANLFKRIGWNTEKEFYINDAGNQIDLLGESLYA 179 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 RY Q L D +PE Y G YL + KEL ++ S++ + E + K+Y++ M++ Sbjct: 180 RYMQLL-GYDYQVPEEGYHGYYLIELAKELLNQ-KSQIESMDETEKKKFFKEYALSKMLE 237 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L +++D++ SE H + ++++++ L + GY YE Sbjct: 238 DIKTTLLNFGVEYDVWFSERTLH--ENGKVKEVLEILRQNGYTYE--------------- 280 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 L F ST GD+ DR L+KSDG TYF AD+AY K +RGFD +I V G+DH G+ Sbjct: 281 -KDGALWFSSTKFGDEKDRVLIKSDGKATYFLADIAYHLNKIQRGFDWIIDVWGADHHGH 339 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 V RL+ A+ K + ++L ++VRL R IKMSKR GDFITL+ + +EVG D++R Sbjct: 340 VTRLKGAIQALGYPKDILEIILVQMVRLMRGNEEIKMSKRTGDFITLKEIQEEVGKDAIR 399 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 F L R LDFD K+QS ENPV+YVQYA+ARC SI + A+ ++L + Sbjct: 400 FFFLLRSPESQLDFDINLAKKQSVENPVYYVQYAHARCCSILKNAETKG----YNLADLD 455 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + E LI++L YP +E+ T E ++L FYL +L+++FHG++ + Sbjct: 456 KADLSLLKEEKEKDLILNLLRYPERLEDITRTLEIHQLPFYLLNLSTLFHGYYDSYK--- 512 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V + +++LT+ RL LV V II L+I+GV +P +M Sbjct: 513 ----VISEDKELTLARLVLVDCVRIIIKDALSILGVSAPEKM 550 >gi|170729360|ref|YP_001774793.1| arginyl-tRNA synthetase [Xylella fastidiosa M12] gi|238687898|sp|B0U1H9|SYR_XYLFM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|167964153|gb|ACA11163.1| Arginine--tRNA ligase [Xylella fastidiosa M12] Length = 562 Score = 544 bits (1401), Expect = e-152, Method: Composition-based stats. Identities = 185/591 (31%), Positives = 300/591 (50%), Gaps = 37/591 (6%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 + A + + ++ + + L V+ERP+ HG +TN AM+LS+ G +P Sbjct: 1 MKAPLRALICQGIEALRSNGTLPTNTLPPDFVVERPKTRKHGDFATNVAMLLSKATGSNP 60 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +A+ +VA + D+ + IAG GFIN ++ P + +++ +YGRNL G+ Sbjct: 61 RLLAQTLVAALPTSADIARIEIAGPGFINFHMHPVAYQHETINVLKQDNDYGRNLSGQSR 120 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 V +E+VSANPTGP+HVGH R A +GD LA L+ +G+ V RE+Y NDAG QI+ L SV Sbjct: 121 TVGVEYVSANPTGPLHVGHGRAAAIGDCLARLLEANGWNVKREFYYNDAGVQIDNLVRSV 180 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN-----FPEEKWLPIVKDY 236 R + L D+ P Y G Y+ + K S +++ + + Sbjct: 181 QARAR-GLKPGDALWPTDAYNGEYIADIAKAYLAGDSINMVDTIITSTKNVDDTAAIHHF 239 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 +V + DL A N+ DI+ E ++ + + + L G+ YE Sbjct: 240 AVNYLRNEQNHDLAAFNVDFDIYFLESSLYK--DGKVEETVQKLINSGHTYE-------- 289 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + L +ST GDD DR + KSDGSYTYF D+AY K++RG++ I + Sbjct: 290 --------EGGALWLKSTHFGDDKDRVMRKSDGSYTYFVPDIAYHLSKWQRGYERAITEL 341 Query: 357 GSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414 G+DH G + R+ A A+ +L ++V + R G +K+SKR+G ++TLR ++ Sbjct: 342 GADHHGSLARVHAGLQALEIGIPPGWPEYVLHQMVTVMRGGEEVKLSKRSGGYVTLRDLI 401 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 +E +D+ R+ ++ RK L FD +++S +NPVFYVQYAYAR S+ QA + + Sbjct: 402 EETSTDATRWFLIARKPDSQLTFDIDLARQKSNDNPVFYVQYAYARVCSLMHQAHEKNLN 461 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 D + + D + L L++ ++ YP +++ A EP+ +A YL +LA FH Sbjct: 462 YDQ---TSGMASLDQLSDNTSLCLMIEISRYPEIVQIACELLEPHLIAQYLRELAHAFHT 518 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + V N +L L A ++ +GLN++GV +P +M Sbjct: 519 WYHNT-------PVLVENAVERNAKLTLACATRQVLANGLNLLGVGTPEKM 562 >gi|319790089|ref|YP_004151722.1| arginyl-tRNA synthetase [Thermovibrio ammonificans HB-1] gi|317114591|gb|ADU97081.1| arginyl-tRNA synthetase [Thermovibrio ammonificans HB-1] Length = 547 Score = 544 bits (1401), Expect = e-152, Method: Composition-based stats. Identities = 196/581 (33%), Positives = 317/581 (54%), Gaps = 36/581 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKK--ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 ++ + E + + + +R +E+P+ G +TN A +L++ + +P + Sbjct: 1 MKELVRERILEAVTSVYGDDAAAVAERATVEKPKKSEFGDFATNVAFLLAKVVRQNPRVV 60 Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 A+ + A++ + + V +AG GFIN +LS +L +V ++ + +G G KV Sbjct: 61 AQELAAKLSGVEEFEKVEVAGGGFINFFLSQKAYENLLVQVVE--TDFYVSDVGGGEKVL 118 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +E+VSANPTGP+HVGH R AVVGD L +M +GY RE+YINDAG QI L LS++ R Sbjct: 119 LEYVSANPTGPLHVGHGRGAVVGDVLYRIMRLTGYVPEREFYINDAGRQIRLLGLSIYLR 178 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 +Q L + +LPE Y G Y+ + K+L ++ +LL+ PEE+ + + + + ++K Sbjct: 179 AKQ-LKGENVELPEDAYRGDYIVELAKKLLEEVRPDLLDLPEEEAVEVAAQFGKEELLKE 237 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 I DLK L ++ D + SE H D I +++ L +G +YE Sbjct: 238 IEADLKKLRVEFDNWFSEKSLH--DSGKIEEVLKLLEEKGLLYE---------------- 279 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 L ++T+ GDD DR + +S G YTYFAAD+AY K +RG+D + V G+DH GY+ Sbjct: 280 KDGALWLKTTLFGDDKDRVVKRSTGEYTYFAADIAYHYDKLKRGYDRAVDVWGADHHGYI 339 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 R+EA A+ + + V+L ++V+L++ G +KMSKR GDF+ LR ++++VG D VRF Sbjct: 340 PRVEAALKALGAPEGWLEVVLIQMVKLFKGGKEVKMSKRKGDFVPLRWLMEQVGVDPVRF 399 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 L +++ LDFD S +NPV+YVQYA+AR S+ +AK+ F + Sbjct: 400 FFLLKRHDTPLDFDLDLAVSTSSDNPVYYVQYAHARLCSVLDKAKERG-------FLPSK 452 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 + E +LI + ++ A +EP++L +YL +LAS H ++ Sbjct: 453 ENLDLLSSDEERKLITGCYQLKYELQQAAQKREPHRLTYYLIELASTLHRFYNKH----- 507 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + +N +LT RL LV AV + +GL I+ V +P M Sbjct: 508 -KVINEDNPQLTRARLYLVEAVRKTVATGLAILNVSAPRRM 547 >gi|167736849|ref|ZP_02409623.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 14] Length = 594 Score = 544 bits (1401), Expect = e-152, Method: Composition-based stats. Identities = 200/615 (32%), Positives = 318/615 (51%), Gaps = 65/615 (10%) Query: 7 FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 + L+N +K++ K + +L I +ERP+ AHG ++ N A+ L++PLG +P Sbjct: 9 LETLLENSVKQVVQASKDDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQ 68 Query: 64 IAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +AE IVA + P+ VD+ IAG GFINL L+P+ + ++ +++ G +G + Sbjct: 69 LAEQIVAALTAQPEAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVLAQGRAFGASERDH 128 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA+ Sbjct: 129 GKRVLLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAI 188 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233 S R + L D+ PE Y G Y+ + ++ A + + + L + Sbjct: 189 STQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRDVEDLEAI 247 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 + ++V + + DLKA ++ D + E + + +D L G YE Sbjct: 248 RKFAVTYLRREQDMDLKAFGVKFDQYYLESSLYT--EGRVEKTVDALIAAGMTYE----- 300 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353 L R+T GDD DR + K+DG+YTYF D+AY K+ERGF +I Sbjct: 301 -----------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVI 349 Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+R Sbjct: 350 NIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVR 409 Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 +++ G D+VRF ++ RK FD +Q+ ENP Sbjct: 410 DLIEWSGGATPGSEGSPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+YVQYA+AR S+ + K + D L ++ P +S+ + L+ LAEYP V+ Sbjct: 470 VYYVQYAHARICSVINEWKSRYGATDALLPGADLSPLDSK---QAMALMQKLAEYPDVLA 526 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A P+ +AFYL +LAS FH ++ R V + + R+ L+ A ++ Sbjct: 527 HAAGELAPHAVAFYLRELASEFHSFYNAER-------VLVDEQAPRTARVALLAATRQVL 579 Query: 571 NSGLNIIGVESPNEM 585 +GL ++GV +P++M Sbjct: 580 ENGLAMLGVSAPSKM 594 >gi|15827558|ref|NP_301821.1| arginyl-tRNA synthetase [Mycobacterium leprae TN] gi|221230035|ref|YP_002503451.1| arginyl-tRNA synthetase [Mycobacterium leprae Br4923] gi|13432208|sp|P45840|SYR_MYCLE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|254782977|sp|B8ZR24|SYR_MYCLB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|13093108|emb|CAC31508.1| arginyl-tRNA synthase [Mycobacterium leprae] gi|219933142|emb|CAR71222.1| arginyl-tRNA synthase [Mycobacterium leprae Br4923] Length = 550 Score = 543 bits (1400), Expect = e-152, Method: Composition-based stats. Identities = 188/582 (32%), Positives = 291/582 (50%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD + LK + + ++ L + + +ERPR+ HG S+N AM L + +G +PL Sbjct: 4 ADLAELLKTTAIVVLAERGLDAAALPQTVTVERPRNPEHGDYSSNLAMQLGKKVGANPLE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + + V +AG GFIN+ L S I+++++ + +G + G ++ Sbjct: 64 LAGWLAEVLAQAGGIADVEVAGPGFINMRLDASAQAMIVNTVINADKNFGHSDDLAGYQI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L L++ G V REYY ND GAQI+ S+ Sbjct: 124 NLEFVSANPTGPIHIGGTRWAAVGDALGRLLSTQGAAVVREYYFNDHGAQIDRFTNSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + L P Y G Y+ + ++ + + L+ PE + V++ V M Sbjct: 184 AAKGELT------PADGYAGTYVTDIAAQVMQQ-APYALSLPESEMHETVREIGVDLMFT 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L D++ ED H + + I L G VYE Sbjct: 237 HIKKSLHEFGTDFDVYTHEDSMHA--SGRVDEAIARLRDTGNVYE--------------- 279 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 L R++ GDD DR ++KSDG Y A DLAY+ K +RGFD IY++G+DH GY Sbjct: 280 -KDGALWLRTSAFGDDKDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA + A + VL+ ++V L DG ++MSKR+G+ ITL +V+ +G D+ R Sbjct: 339 IARLKAAAAAFGDDPAIVEVLIGQMVNLVCDGQLVRMSKRSGNVITLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D S ENPV+YVQYA+AR ++ R A + + Sbjct: 399 YSLIRSSVDTPIDIDLALWSSSSNENPVYYVQYAHARLSALARNAAEFG-------LIPD 451 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 E E L+ + E+P+V++ A +EP+++ YL DLA +H + R P Sbjct: 452 TGHLELLSHDKEGALLRTVGEFPQVLKTAAALREPHRVCRYLEDLAGDYHRFYDSCRVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L RL L A +I +GL I+GV +P M Sbjct: 512 QG---DEKPTDLHTARLALCQANRQVIANGLAILGVSAPERM 550 >gi|313673413|ref|YP_004051524.1| arginyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672] gi|312940169|gb|ADR19361.1| arginyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM 19672] Length = 542 Score = 543 bits (1400), Expect = e-152, Method: Composition-based stats. Identities = 211/579 (36%), Positives = 313/579 (54%), Gaps = 37/579 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 +K + E + +++ IE P+ +G S+N A +LS+ L P+ IA Sbjct: 1 MEDLIKEVIDEALKRYELKSV---NYTIEIPKKSENGDFSSNVAFVLSKALKQRPIDIAN 57 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 IV+ I + V +A GFIN +LS L + ++ ++ IG K +E Sbjct: 58 EIVSYIDKK-NFSKVEVAPPGFINFFLSKEPYYNFLKA-IIEKPDFHIEKIGNNKKAMVE 115 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+H+GH R + GDT+A L+ SG+ V +EYYINDAG Q+N LALS++ RY Sbjct: 116 FVSANPTGPLHIGHGRGSAYGDTIARLLNISGFNVYKEYYINDAGNQMNNLALSIYSRYC 175 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 + L+ D P Y G Y+ + K++A+KY LLN E + I + V+ ++ I Sbjct: 176 E-LFGKDYPFPADGYKGEYIIDIAKDIAEKYQDNLLN-DEINGIKICFEIGVKTILDGIE 233 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 DL+ + D + SE + + + I+ L + GY+YE Sbjct: 234 ADLRDFRVTFDNWFSEKSLY--ESQEVEKTIELLKKNGYIYE----------------KD 275 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366 L F+S +GDD DR + +S G YTYFA+D+AY K K+ERGF+ ++ V G+DH GYV R Sbjct: 276 NALWFKSEQLGDDKDRVIKRSTGEYTYFASDIAYHKNKFERGFEYLVDVWGADHHGYVNR 335 Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 L+ A+ + + L ++V L + G I MS RAG+FITLR ++DEVG+D+ R+ Sbjct: 336 LKNGVKALGIDVENLKIQLIQMVSLIKGGERISMSTRAGEFITLRWLLDEVGTDAARYFY 395 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 L R + DFD K +S +NPV+Y+QYA+AR S+ R AK+ D Sbjct: 396 LMRDINSQFDFDIDLAKSKSNDNPVYYIQYAHARVCSLKRNAKEKGIDFKISN------D 449 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 E SEL++I L ++ VI+ ATI EP+++ +YL DLA +FH ++ + Sbjct: 450 LELLTLPSELEIIKKLYDFKNVIKTATINLEPHRICYYLQDLAGLFHTYYYN------TT 503 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V N+ K T RL L AVA I+ GLNI+GV +P M Sbjct: 504 IVDENDLKTTNARLSLSEAVAKTISLGLNILGVSAPERM 542 >gi|227501671|ref|ZP_03931720.1| arginyl-tRNA synthetase [Corynebacterium accolens ATCC 49725] gi|227077696|gb|EEI15659.1| arginyl-tRNA synthetase [Corynebacterium accolens ATCC 49725] Length = 550 Score = 543 bits (1400), Expect = e-152, Method: Composition-based stats. Identities = 184/582 (31%), Positives = 303/582 (52%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD ++ +K + + ++ +L D + +ERPR+ HG +TN A+ +++ G +P Sbjct: 4 ADLATLVKESATAVMAEHDLDASVLPDSVTVERPRNPEHGDYATNLALQVAKKAGANPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 + ++ + IAG GFIN+ L+ + +I++ I+ +G +YG N G K+ Sbjct: 64 FGGWLAEKLAQHDAIAEADIAGPGFINIRLAAAAQGEIVAQILQAGADYGSNDSFAGKKI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++ SG EVTREYY ND G QI+ + S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLTASGAEVTREYYFNDHGGQIDRFSRSLVA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + + +K S L + + V+ M Sbjct: 184 AAK------GEPTPEDGYGGDYIHDIASAVVEKNPSA-LEGDAAQVQEAFRADGVEMMFA 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L + D++ E+ + + ++ L +G++YE Sbjct: 237 QIKQSLHEFGVDFDVYFHENSLF--ESGAVDKALETLKSEGHLYEA-------------- 280 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 +ST GD DR ++KSDG+ Y A D+AY K++RG D IY++G+DH GY Sbjct: 281 --DNAWWLKSTDYGDSKDRVVVKSDGNAAYIAGDIAYVADKFDRGHDLNIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 V RL+A AAA+ + VL+ ++V L RDG P++MSKRAG IT+ +V +G D+ R Sbjct: 339 VPRLKAAAAALGYDADGVEVLIGQMVNLLRDGKPVRMSKRAGTVITIEDLVAAIGVDASR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ + +D D + QS +NPV+YVQY +AR SI R+A ++ + + + Sbjct: 399 YSLVRSSVDQSIDIDLGLWESQSSDNPVYYVQYGHARLCSIGRKAAELG--VSSEGADLS 456 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ E E D LI L E+P V+ +A +EP+++A Y +LA VFH + + P Sbjct: 457 LLEHEREGD-----LIRTLGEFPAVVADAAELREPHRVARYAEELAGVFHRFYDTCQVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + RL L A ++++ L ++GV SP +M Sbjct: 512 K---AGEEEQPIHSARLALAEASRVVLSNALTMVGVSSPEKM 550 >gi|114327924|ref|YP_745081.1| arginyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1] gi|114316098|gb|ABI62158.1| arginyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1] Length = 591 Score = 543 bits (1400), Expect = e-152, Method: Composition-based stats. Identities = 251/595 (42%), Positives = 359/595 (60%), Gaps = 21/595 (3%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 ++A + + L + + ++ R+ + RD HG ++TNAAMI ++P G P Sbjct: 5 IYALIRTHVLEALARVVP--DLPAELTARVEVTPTRDPLHGDMATNAAMIAAKPAGKPPR 62 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +A+ + A + +++ AG GF+N++L R + +I+ +GI YG G G + Sbjct: 63 DLAQALSAALAGVTEIERAEPAGPGFVNMHLRAEAWRMRIPAILEAGIRYGDGSAGYGKR 122 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VNIE+VSANPTGPMH+GHCR AVVGD LA+LM +GY VT+EYYINDAGAQ+ LA + + Sbjct: 123 VNIEYVSANPTGPMHIGHCRGAVVGDALANLMGKAGYTVTKEYYINDAGAQVIALAWAAY 182 Query: 183 WRYQQALYNNDSD------LPEGY-YPGVYLKHVGKELADKYSSELLN-----FPEEKWL 230 WRY QAL ++ +P G Y G YL VG+ELA + L WL Sbjct: 183 WRYLQALGTTLTEDEYAAQVPCGLQYRGDYLVPVGEELARLHGDTLAGPGTTVADSALWL 242 Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290 V++++V MM IR+DL L + D+F SE + I+ L + G +YEG+ Sbjct: 243 NTVREFTVAQMMASIREDLDLLGVHPDVFSSELALLQ--SGAADAAIERLQQDGLIYEGV 300 Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350 L PPK KT + R+Q LFRST GDDVDRPL KSDG+ TYFA D+AY K R D Sbjct: 301 LEPPKGKTPDDWE-PREQTLFRSTSFGDDVDRPLRKSDGTNTYFANDIAYHADKATR-AD 358 Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 ++ V+G+DH GYV R++A A+ +A +LC++V + RDG P++MSKRAG ++TL Sbjct: 359 IVVDVLGADHGGYVPRVKAAMRAI-APQAIYEAVLCQIVHVVRDGQPVRMSKRAGTYVTL 417 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R +++EVG D+VRF ML RK+ ++FD + Q++ENPVFYVQYA+ARC S+ R A + Sbjct: 418 RDLLEEVGRDAVRFTMLTRKSDAQMEFDLDQALAQTRENPVFYVQYAHARCCSVLRMAAE 477 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 + + +S +EL LI LA +PR++E A A+EP+++AF+LY+LA Sbjct: 478 QGLTTQPEALRHAAL--DSLTSDAELTLIRRLAGWPRIVEAAAQAREPHRIAFFLYELAG 535 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 FH W+ GR++ LRF+Q + T RL LV A A +I SGL ++GV NEM Sbjct: 536 DFHMLWNKGRDDATLRFIQQDRTTETTARLALVEAAAIVIRSGLAVMGVAPVNEM 590 >gi|213964728|ref|ZP_03392928.1| arginyl-tRNA synthetase [Corynebacterium amycolatum SK46] gi|213952921|gb|EEB64303.1| arginyl-tRNA synthetase [Corynebacterium amycolatum SK46] Length = 550 Score = 543 bits (1399), Expect = e-152, Method: Composition-based stats. Identities = 183/586 (31%), Positives = 292/586 (49%), Gaps = 37/586 (6%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGL 59 M AD + ++ E+ + I+ +ERPR+ HG +TN AM L + +G+ Sbjct: 1 MNP-ADLAVLVRKVTVEVLTSHDADVSIVPENPTVERPRNPEHGDYATNIAMQLGKRVGM 59 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P +A I + +D IAG GFIN+ L+ KI+ ++ +G ++G Sbjct: 60 VPRDLATEIATALGASEGIDEAIIAGPGFINIRLASDAQGKIVEEVLAAGEKWGHADFNS 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 VN+EFVSANPTGP+H+G R A VGD L +++ +G +VTREYY ND G QI+ + Sbjct: 120 NLDVNLEFVSANPTGPIHLGGTRWAAVGDALGRVLSATGAKVTREYYFNDHGRQIDRFSD 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ + PE Y G Y++ + + +K + + L EE+ + V Sbjct: 180 SLVAAARNQ------PTPEDGYGGEYIQDIAAAVLEK-NPQALEGSEEEVQEHFRAIGVD 232 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M + I++ L D++ E+ + + +++L G +YE Sbjct: 233 MMFEHIKESLHEFGTDFDVYFHENSLF--ESGQVEAAVNSLKENGKLYEA---------- 280 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 +ST GDD DR ++KSDG Y A D+AY K K++RG + IY++G+D Sbjct: 281 ------DGAWWLKSTDYGDDKDRVVIKSDGDAAYIAGDIAYVKNKFDRGHNLCIYMLGAD 334 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL A AAA+ + VL+ ++V L RDG ++MSKRAG +TL +V+ +G Sbjct: 335 HHGYIARLRAAAAALGYNADGVEVLIGQMVNLLRDGKAVRMSKRAGTVVTLDDLVESIGV 394 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ ++ LD D QS +NPV+YVQY +AR SI R+A++ + Sbjct: 395 DAARYSLIRSSVDSSLDIDLGLWASQSSDNPVYYVQYGHARLCSIGRRAEETGVTSEGAD 454 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 F + E +LI + E+P +I++A +EP+++A Y LA VFH + Sbjct: 455 FSL-------LVEDHEGELIRTIGEFPAIIKSAADLREPHRIARYAEQLAGVFHRFYDTC 507 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P+ +L RL L A + + L ++GV +P M Sbjct: 508 QILPK---ADEEVSELHRARLGLAEATRQTLANALQLLGVTAPERM 550 >gi|292490188|ref|YP_003525627.1| arginyl-tRNA synthetase [Nitrosococcus halophilus Nc4] gi|291578783|gb|ADE13240.1| arginyl-tRNA synthetase [Nitrosococcus halophilus Nc4] Length = 585 Score = 543 bits (1399), Expect = e-152, Method: Composition-based stats. Identities = 189/614 (30%), Positives = 305/614 (49%), Gaps = 60/614 (9%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + L + + + I ++R RD HG ++N M+L++ P Sbjct: 1 MKEQLRKLIVTALSSLQQEGMLPHWDTHNIQVKRTRDKRHGDFASNITMMLAKEARQKPR 60 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +A LIV+R+ P V+ V IAG GFIN L+ + ++S ++ ++G + +G+ Sbjct: 61 DLAGLIVSRLPEHPWVEKVEIAGPGFINFTLALPAFQAVVSLVLDQREDFGCSNLGQNKP 120 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V++EFVSANPTGP+HVGH R A GD LA L+ GY++ REYY+NDAG Q++ LA SV+ Sbjct: 121 VHLEFVSANPTGPLHVGHGRGAAYGDALARLLTTVGYKIHREYYVNDAGRQMDILAASVW 180 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGK------------------------------- 211 RY + L P Y G Y++ + + Sbjct: 181 LRYLE-LCGETLPFPANGYRGSYVRDIAQVLKTEKDDIFHRPGQEILDGLPPDAPTGDKE 239 Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 + D + + E+ V D + +++ IR+DL + +D + SE H + Sbjct: 240 QYIDALIQKCKDLLGERGYRQVFDQGLNSILADIREDLAEFGVTYDEWFSER--HLMETG 297 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + ++ L ++Y+ FRST GD+ DR +++ +G Sbjct: 298 AVEQAVEQLKTSSHLYQ----------------KEGAWWFRSTDFGDEKDRVVIRENGQP 341 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 TYFA+D+AY K ERG+ +I V G+DH GYV+R+++ A+ Q+ + L + L Sbjct: 342 TYFASDIAYHLNKLERGYPKIIDVWGADHHGYVQRVKSSLQALGADPQQLEIRLVQFAIL 401 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 YR ++MS R+G+F+TLR + EVG D+ RF + R + +DFD K QS ENPV Sbjct: 402 YRGKEKVQMSTRSGEFVTLRELRQEVGKDAARFFYVMRSAEQHMDFDLELAKSQSNENPV 461 Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511 +YVQYA+AR S+FRQ ++ D + + ++ E+ L+ L+ Y V+E+ Sbjct: 462 YYVQYAHARISSVFRQLEERGLAWD---PKQGRKQLQKLNESHEVALLDRLSCYSEVVED 518 Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571 A P+ LA+YL DLA FH +++ + +L RL L+ A +I Sbjct: 519 AATQSAPHLLAYYLMDLARDFHTYYNAHTF-------LVDTPELRDARLTLIAATQQVIK 571 Query: 572 SGLNIIGVESPNEM 585 +GL ++GV +P M Sbjct: 572 NGLTLLGVSAPEAM 585 >gi|302869607|ref|YP_003838244.1| arginyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029] gi|315503931|ref|YP_004082818.1| arginyl-tRNA synthetase [Micromonospora sp. L5] gi|302572466|gb|ADL48668.1| arginyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029] gi|315410550|gb|ADU08667.1| arginyl-tRNA synthetase [Micromonospora sp. L5] Length = 555 Score = 542 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 187/584 (32%), Positives = 302/584 (51%), Gaps = 35/584 (5%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 A+ + + + + +++ L + +ERPR+ HG ++ A+ LS+ +G+ P Sbjct: 4 AELAEVVLAAAHAVFDERGLDRAALPAQTTVERPRNPDHGDYASTLALQLSKKVGVPPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + P + SV IAG GF+N+ L + ++ IV +G YGR+ G ++ Sbjct: 64 LATALADELAKAPGIKSVEIAGPGFLNVRLDAAAAGQLAKVIVEAGPAYGRSDTLAGQRI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L+ L+ +G +V EYY NDAG+QI+ A S+ Sbjct: 124 NLEFVSANPTGPVHIGGVRWAAVGDALSRLLRATGADVGTEYYFNDAGSQIDRFARSLLA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + E+ + ++L+ PE+ + ++ VQ M Sbjct: 184 AAK------GEPAPEDGYGGAYIAEIAAEVV-RLRPDVLDLPEDAAQEVFRNEGVQLMFA 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L+ ++ D + +E D H G + +D L QG+V+E Sbjct: 237 EIKSSLRDFGVEFDTYFNEKDLHDG--GALDAALDRLREQGHVFES-------------- 280 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 R+T GDD DR L KS+G +TYFAAD AY+ K ERGFD ++ ++G+DH GY Sbjct: 281 --EGATWLRTTEFGDDKDRVLRKSNGEWTYFAADCAYYLNKRERGFDRVVIMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 + R++A++A + A+ + +L+ +LV L RDG P++MSKRAG +TL +VD +G D+ Sbjct: 339 IGRMKAMSACFGDDPARNLEILIGQLVNLVRDGAPVRMSKRAGTVVTLEDLVDAIGVDAA 398 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 R+ + +D D +NPV+YVQY AR + R A +I Sbjct: 399 RYALARYSADSPIDIDVELWTRAKNDNPVYYVQYVAARTAGVARNAAEIG----LTRGDA 454 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD-LASVFHGHWSHGRE 541 E E +L+ LAE+P V+ A +EP+++A YL + +A +H + + R Sbjct: 455 AAFQPELLGHDKENELLKALAEFPAVVATAAELREPHRVARYLEESVAQAYHRFYDNCRI 514 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P+ RL L A +I +GL+++GV +P M Sbjct: 515 APQG---DEEITDTHRARLWLNDATRVVIANGLHLLGVSAPERM 555 >gi|53724623|ref|YP_101930.1| arginyl-tRNA synthetase [Burkholderia mallei ATCC 23344] gi|76812104|ref|YP_332006.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 1710b] gi|121601263|ref|YP_994392.1| arginyl-tRNA synthetase [Burkholderia mallei SAVP1] gi|124385045|ref|YP_001027962.1| arginyl-tRNA synthetase [Burkholderia mallei NCTC 10229] gi|126448815|ref|YP_001081819.1| arginyl-tRNA synthetase [Burkholderia mallei NCTC 10247] gi|167001851|ref|ZP_02267643.1| arginine--tRNA ligase [Burkholderia mallei PRL-20] gi|167917308|ref|ZP_02504399.1| arginyl-tRNA synthetase [Burkholderia pseudomallei BCC215] gi|217419591|ref|ZP_03451097.1| arginine--tRNA ligase [Burkholderia pseudomallei 576] gi|238562825|ref|ZP_00439796.2| arginine--tRNA ligase [Burkholderia mallei GB8 horse 4] gi|254176934|ref|ZP_04883591.1| arginyl-tRNA synthetase [Burkholderia mallei ATCC 10399] gi|254202041|ref|ZP_04908405.1| arginyl-tRNA synthetase [Burkholderia mallei FMH] gi|254259734|ref|ZP_04950788.1| arginine--tRNA ligase [Burkholderia pseudomallei 1710a] gi|254359822|ref|ZP_04976093.1| arginyl-tRNA synthetase [Burkholderia mallei 2002721280] gi|81605730|sp|Q62MY7|SYR_BURMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|109894976|sp|Q3JWP7|SYR_BURP1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|166232764|sp|A3MNI3|SYR_BURM7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|166232765|sp|A2S7P3|SYR_BURM9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|166232766|sp|A1V839|SYR_BURMS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|52428046|gb|AAU48639.1| arginyl-tRNA synthetase [Burkholderia mallei ATCC 23344] gi|76581557|gb|ABA51032.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 1710b] gi|121230073|gb|ABM52591.1| arginyl-tRNA synthetase [Burkholderia mallei SAVP1] gi|124293065|gb|ABN02334.1| arginine--tRNA ligase [Burkholderia mallei NCTC 10229] gi|126241685|gb|ABO04778.1| arginine--tRNA ligase [Burkholderia mallei NCTC 10247] gi|147747935|gb|EDK55011.1| arginyl-tRNA synthetase [Burkholderia mallei FMH] gi|148029036|gb|EDK86968.1| arginyl-tRNA synthetase [Burkholderia mallei 2002721280] gi|160697975|gb|EDP87945.1| arginyl-tRNA synthetase [Burkholderia mallei ATCC 10399] gi|217396895|gb|EEC36911.1| arginine--tRNA ligase [Burkholderia pseudomallei 576] gi|238521851|gb|EEP85299.1| arginine--tRNA ligase [Burkholderia mallei GB8 horse 4] gi|243062445|gb|EES44631.1| arginine--tRNA ligase [Burkholderia mallei PRL-20] gi|254218423|gb|EET07807.1| arginine--tRNA ligase [Burkholderia pseudomallei 1710a] Length = 594 Score = 542 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 199/615 (32%), Positives = 317/615 (51%), Gaps = 65/615 (10%) Query: 7 FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 + L+N +K++ K + +L I +ERP+ AHG ++ N A+ L++PLG +P Sbjct: 9 LETLLENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQ 68 Query: 64 IAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +AE IVA + P+ VD+ IAG GFINL L+P+ + ++ +++ G +G + Sbjct: 69 LAEQIVAALTAQPEAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVLAQGRAFGASERDH 128 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA+ Sbjct: 129 DKRVLLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAI 188 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233 S R + L D+ PE Y G Y+ + ++ A + + + L + Sbjct: 189 STQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRDVEDLEAI 247 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 + ++V + + DLKA ++ D + E + + +D L G YE Sbjct: 248 RKFAVTYLRREQDMDLKAFGVKFDQYYLESSLYT--EGRVEKTVDALIAAGMTYE----- 300 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353 L R+T GDD DR + K+DG+YTYF D+AY K+ERGF +I Sbjct: 301 -----------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVI 349 Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+R Sbjct: 350 NIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVR 409 Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 +++ G D+VRF ++ RK FD +Q+ ENP Sbjct: 410 DLIEWSGGATPGSEGSPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+YVQYA+AR S+ + K + D L ++ P +S+ + L+ LAEYP V+ Sbjct: 470 VYYVQYAHARICSVINEWKSRYGATDALLPGADLSPLDSK---QAMALMQKLAEYPDVLA 526 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A P+ +AFYL +LAS FH ++ R V + + R+ L+ A ++ Sbjct: 527 HAAGELAPHAVAFYLRELASEFHSFYNAER-------VLVDEQAPRTARVALLAATRQVL 579 Query: 571 NSGLNIIGVESPNEM 585 +GL ++GV +P++M Sbjct: 580 ENGLAMLGVSAPSKM 594 >gi|296119500|ref|ZP_06838058.1| arginine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306] gi|295967383|gb|EFG80650.1| arginine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306] Length = 550 Score = 542 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 190/582 (32%), Positives = 297/582 (51%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD S LK ++ ++ +L + +ERPR+ HG +TN A+ +++ G++P Sbjct: 4 ADLSLLLKESALQVFESHDLDTSVLPEAVTVERPRNPEHGDYATNVALQVAKKAGVNPRQ 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +AE + + +D IAG GF+N+ L+ + +I+S I +G YG KV Sbjct: 64 LAEWLAEALAKSDAIDVAEIAGPGFLNIRLAAAAQGEIVSQIAAAGANYGNGEAMADLKV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L + +G VTREYY ND G QI+ A S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRIFEAAGATVTREYYFNDHGGQIDRFARSLVA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + E+ + L P E + V+ M + Sbjct: 184 AAKN------EPTPEDGYGGQYIHDIAAEVLRQKDDALEGTPAEV-QENFRSLGVEMMFE 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ DL + D++ E+ + + +D L G +YE Sbjct: 237 QIKQDLHEFGVDFDVYFHENSLF--ESGAVDKALDQLKTSGQMYET-------------- 280 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 +ST GD DR ++KSDG+ Y A D+AY K++RG + IY++G+DH GY Sbjct: 281 --EGAWWLKSTDYGDSKDRVVIKSDGNAAYIAGDIAYVADKFDRGHNLNIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 V RL+A AAA+ + VL+ ++V L RDG+ +KMSKRAG IT+ +V+ +G D+ R Sbjct: 339 VPRLKAAAAALGYDADAVEVLIGQMVNLLRDGVAVKMSKRAGTVITMNDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ + +D D QS ENPV+YVQY +AR SI R+A++ + D + Sbjct: 399 YSLVRSSVDQSIDIDLGLWAAQSSENPVYYVQYGHARLCSIQRKAEEAG--VTSDAADLS 456 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ E E D LI L E+P V+ + +EP+++A Y DLASVFH + + P Sbjct: 457 LLTHEREGD-----LIRTLGEFPAVVAESAQLREPHRVARYAEDLASVFHKFYDQCQILP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + RL L A ++ + L ++GV +P +M Sbjct: 512 K---AGDEAEPIHGARLALAQATRQVLANALGMVGVSAPEKM 550 >gi|300692742|ref|YP_003753737.1| arginyl-tRNA synthetase [Ralstonia solanacearum PSI07] gi|299079802|emb|CBJ52479.1| Arginyl-tRNA synthetase [Ralstonia solanacearum PSI07] Length = 600 Score = 542 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 197/621 (31%), Positives = 297/621 (47%), Gaps = 69/621 (11%) Query: 8 SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 + L + + E IV+ERP+ AHG ++ N A+ L++PLG +P +A Sbjct: 6 KQTISQLLSDAVGTLLPEGTNRPEIVLERPKQAAHGDIACNVALQLAKPLGTNPRELANR 65 Query: 68 IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 I I+ D V +V IAG GFINL LSP+ +L+++ YG G V Sbjct: 66 IADGIRADARGQRLVSAVEIAGPGFINLRLSPTARTDVLAAVFAESDRYGAADTHDGAPV 125 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EFVSANPTGP+HVGH R A +GD LASL+ + G++V RE+Y NDAG QI+ LA+SV Sbjct: 126 LVEFVSANPTGPLHVGHGRQAALGDALASLLEWQGHKVHREFYYNDAGVQIHNLAVSVQA 185 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPIVKDYS 237 R + D+ PE Y G Y+ + + + + + L ++ ++ Sbjct: 186 RAR-GFKPGDAGWPEAAYNGDYIADIAADYLAGKTVRASDGEPVTGARDVENLEAIRRFA 244 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 V + DL+A ++ D + E + ++ +D L G YE Sbjct: 245 VTYLRNEQDIDLQAFGVKFDHYYLESSLYA--DGKVQQTVDALIDAGKTYE--------- 293 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 L R+T GDD DR + KSDGSYTYF D+AY K+ RGF +I V G Sbjct: 294 -------QDGALWLRTTDDGDDKDRVMRKSDGSYTYFVPDVAYHTTKWGRGFTQVINVQG 346 Query: 358 SDHSGYVKRLEAVAA--AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 SDH G + R+ A + K + +L ++V + +DG +K+SKRAG ++T+R +++ Sbjct: 347 SDHHGTIARVRAGLQGLGLGIPKGYPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIE 406 Query: 416 E------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 G D+VRF +L RK FD +Q Sbjct: 407 WSNGDAESEAGVDTIRACVESGVPSWPERFTRGRDAVRFFLLSRKADTEFVFDVDLALKQ 466 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES-EFDTSELQLIVHLAE 504 S ENPV+YVQYA+AR S+F Q L ++ E + L+ +A Sbjct: 467 SDENPVYYVQYAHARICSVFEQWHAREGGDVASLAGADLAAVAGPEASPQAVALVQRIAA 526 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 +P V+ +A P+ +AFYL DLA FH ++ R V ++ + RL L+ Sbjct: 527 FPDVLADAARELAPHAVAFYLRDLAGDFHTFYNADR-------VLVDDDAVKRARLALLA 579 Query: 565 AVASIINSGLNIIGVESPNEM 585 A ++ +GL +IGV +P +M Sbjct: 580 ATRQVLRNGLAVIGVSAPQKM 600 >gi|317485261|ref|ZP_07944142.1| arginyl-tRNA synthetase [Bilophila wadsworthia 3_1_6] gi|316923552|gb|EFV44757.1| arginyl-tRNA synthetase [Bilophila wadsworthia 3_1_6] Length = 551 Score = 542 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 205/579 (35%), Positives = 322/579 (55%), Gaps = 32/579 (5%) Query: 8 SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 L+ + + + + D+ VIE +D HG L++N A++ ++ G+ P +A Sbjct: 4 EQHLEASFRAVLKNMNLP--WPDKAVIEPSKDPKHGDLASNLALVSAKAAGMPPRELAAK 61 Query: 68 IVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 + + D + SV +AG GF+N+ SP + R+ + I + +G+ +GKG KV +E Sbjct: 62 MAEALRNEDASLASVEVAGPGFLNVTFSPEFWRETIRRIDDAADRFGQATVGKGCKVQVE 121 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 +VSANPTGP+H+GH R A VGDTLA ++ F+GY+VT EYYINDAG Q+ L LS++ R + Sbjct: 122 YVSANPTGPLHIGHGRGAAVGDTLARILRFAGYDVTTEYYINDAGRQMRLLGLSIWLRAK 181 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 + L + PE YY G Y+ + +E+ DK L + + + Y +Q ++ I+ Sbjct: 182 E-LAGIAVEWPEDYYRGSYIIDIAREMMDK-DPGLTSLSDAEGQDRCFAYGMQTILDGIK 239 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 +DL+ ++H ++ SE + + + + L + G +E Sbjct: 240 EDLREFRVEHQVWFSERSLV--ERGAVEETFERLKKAGLSFE----------------KD 281 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366 L FR+T GDD DR L KSDGS TYFA+D+AY KY RGFD ++ V G+DH GYV R Sbjct: 282 GALWFRTTDFGDDKDRVLRKSDGSLTYFASDIAYHDDKYRRGFDRVVDVWGADHHGYVPR 341 Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 ++A AV K ++V+L +LV L +G + MS RAG F TL VV EVG D+ RFM Sbjct: 342 MKAAVQAVGRKAEDLDVVLIQLVNLLENGTQVAMSTRAGQFETLADVVKEVGVDAARFMF 401 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 L RK+ LDFD VK++S +NPV+YVQYA+AR RS+ R+A + L ++ Sbjct: 402 LSRKSDSHLDFDLALVKQRSMDNPVYYVQYAHARVRSVLRKAAEAGLTLPE---KTDLAL 458 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 + +L L+ L + V + A A P+ +++YL +LA + H +++ Sbjct: 459 LAPLSEAEDLALLHFLDRFEDVAKGAAQALAPHHISYYLMELAGMLHSYYAKH------P 512 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +QA + +L + RL L+ +V ++ +GL ++GV +P M Sbjct: 513 VLQAGDPELALARLALLRSVGQVVKNGLELLGVSAPESM 551 >gi|257455955|ref|ZP_05621172.1| arginyl-tRNA synthetase [Enhydrobacter aerosaccus SK60] gi|257446701|gb|EEV21727.1| arginyl-tRNA synthetase [Enhydrobacter aerosaccus SK60] Length = 605 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 193/622 (31%), Positives = 307/622 (49%), Gaps = 67/622 (10%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 S L ++ + + + +D I R +D AHG ++N AMI ++ +P +A+ Sbjct: 8 ISQALALVVESLKQQQILPIDWVDNSTISRTKDQAHGDFASNLAMIAAKTAKKNPRELAQ 67 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 IVA + + V IAG GFIN +L + IL +I+ ++G + G K+ +E Sbjct: 68 TIVAMLPASDMISKVEIAGPGFINFFLDDNARFAILDTIMQQKGDFGTSEEFAGKKIQVE 127 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPT +HVGH R A G ++A+L+ GY+V REYY+NDAG Q++ LA S + RY Sbjct: 128 FVSANPTSSLHVGHGRGAAFGMSVANLLEAVGYQVGREYYVNDAGRQMDILATSTYLRYL 187 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL---------------- 230 + L P Y G Y+K + K + ++ L E L Sbjct: 188 E-LCGEPIVFPTNAYQGDYVKDIAKPIKKQHGDSLKTAWEHMLLNVPADAEYQIDANGEK 246 Query: 231 --------------------------PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 I + ++ ++ I+DDL N+ D + SE Sbjct: 247 VCVSGDKEAHIDGLIANAKANLGDNYQIFHEAALSTILADIQDDLADFNVHFDQWFSEKS 306 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 I ++ L ++G++Y+ L F+ST GD+ DR + Sbjct: 307 IQ----DAIVPALELLEQRGFLYQ----------------KDGNLWFKSTEFGDEKDRVV 346 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 +++G +TYFA+D+AY K K +RG+D +I V GSDH GY+KR++A A+ +++V+ Sbjct: 347 RRANGQFTYFASDIAYHKDKLDRGYDKIIDVWGSDHHGYIKRVKAALTAMGYDAQRMDVI 406 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L + V L+R I+MS R+G F+TLR + EVG+D+ RF + RK + +DFD K Sbjct: 407 LVQFVTLWRGTEQIQMSSRSGQFVTLRELRQEVGNDAARFYYVARKPEQHIDFDLELAKS 466 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 +K+N V+Y+QYA+AR + + ++ +D Q E L+ LA Sbjct: 467 HTKDNAVYYIQYAHARICRVLERTEERGIKVD---DKAGKAHQHRLTQPVETDLLSLLAS 523 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNR-KLTMMRLQLV 563 YP V+ A + EP+ L YL DLAS+FHG ++ R P+ + L RL+L Sbjct: 524 YPEVLRRAAVNYEPHLLTNYLKDLASLFHGWYNDNRILPKDGETPTQDELDLMQARLRLS 583 Query: 564 HAVASIINSGLNIIGVESPNEM 585 +V +I +GL ++G+ +P M Sbjct: 584 KSVRQVIQNGLILLGLTAPTSM 605 >gi|323356884|ref|YP_004223280.1| arginyl-tRNA synthetase [Microbacterium testaceum StLB037] gi|323273255|dbj|BAJ73400.1| arginyl-tRNA synthetase [Microbacterium testaceum StLB037] Length = 554 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 189/576 (32%), Positives = 295/576 (51%), Gaps = 35/576 (6%) Query: 11 LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 + L E + + +ERP++ HG ++NAAM L++ +G +P A I A Sbjct: 13 VIAPLAEARREGSSAGLSAADLPLERPKNRDHGDWASNAAMKLAKVVGANPREFAAEIAA 72 Query: 71 RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130 ++ + SV +AG GFIN+ L + + IV G +G N +N+EFVSA Sbjct: 73 GLESVDGIASVEVAGPGFINIRLDAAAAGALAKVIVEQGEAFGTNDSRADEVINLEFVSA 132 Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190 NPTGP+H+G R A +GD LA +++ G +VTREYY ND GAQI+ A S+ +Q Sbjct: 133 NPTGPIHLGGTRWAALGDALARILSAQGAQVTREYYFNDHGAQIDRFARSLVAAHQ---- 188 Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250 PE Y G Y+ + K +A+ Y ++ + ++ V M I+ L Sbjct: 189 --GDPTPEDGYGGAYIGDIAKRVAEAYDGDVDALDADAKQEAFRELGVNFMFDEIKQSLH 246 Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310 + D++ E+D H + + + L G+++E Sbjct: 247 EFGVDFDVYFHENDLH--NSGAVERAVARLRELGHIFEA----------------DGATW 288 Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 RST GDD DR ++KSDG Y + DLAY+ K ERGF+ I ++G+DH GYV+RL A+ Sbjct: 289 LRSTEFGDDKDRVIIKSDGQPAYISGDLAYYLDKRERGFNRCIIMLGADHHGYVQRLMAM 348 Query: 371 AAAVSEKK-AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429 AA ++ + VL+ ++V L RDG P++MSKRAG +TL +V+ VG D+ R+ + Sbjct: 349 CAAFGDEPNVNLQVLIGQMVNLVRDGQPMRMSKRAGTVVTLEDLVEIVGVDAARYALTRS 408 Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489 LD D +++++ +NPVFYVQYA+AR ++ R A D R+ E Sbjct: 409 SADSNLDIDLDVLQKRTNDNPVFYVQYAHARTHNVARNAAASGVD-------RSEFAPEL 461 Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549 SE L+ L EYPR++ +A +EP+++A YL +LA ++H + + R P Sbjct: 462 LDHESESALLGALQEYPRIVAHAADVREPHRVARYLEELAGLYHRWYDNCRVIPLS---D 518 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A + RL L A ++ +GL ++GV +P M Sbjct: 519 APVETVHRTRLWLNDATGQVLRNGLTLLGVSAPERM 554 >gi|303248045|ref|ZP_07334311.1| arginyl-tRNA synthetase [Desulfovibrio fructosovorans JJ] gi|302490602|gb|EFL50507.1| arginyl-tRNA synthetase [Desulfovibrio fructosovorans JJ] Length = 552 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 209/582 (35%), Positives = 323/582 (55%), Gaps = 39/582 (6%) Query: 9 SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68 L+ L+E K + + IE PRD +HG L+TN AM+ ++ + P +A + Sbjct: 5 EHLRGLLEEALQKRGI--AWPAKTTIEAPRDKSHGDLATNVAMMATKAAKMPPRQLAGEL 62 Query: 69 VARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127 + PD+ V +AG GFIN+ +P + ++ + + SG YGR IG+GT++ +EF Sbjct: 63 REELLAASPDLADVAVAGPGFINVTFTPGFWQRTVLDVAGSGDRYGRLNIGEGTRIQVEF 122 Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187 VSANPTGP+H+GH R A VGD+LA ++ +G+ V EYYINDAG Q+ L S+ +R ++ Sbjct: 123 VSANPTGPLHIGHGRGAAVGDSLARVLRAAGFAVETEYYINDAGRQMRILGQSILYRCRE 182 Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247 L D PE YY G Y+K + +EL D+ LL+ PE+K I + Y + ++ I+ Sbjct: 183 -LAGKDVTEPEDYYRGDYVKELARELLDREGEGLLDLPEDKATDICRLYGEKEILDGIKK 241 Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307 DL+ + HD++ E + D+L + Y+ Sbjct: 242 DLREFRVGHDVWFPESKLFA--AGAVARTFDDLRAKNLAYD----------------KDG 283 Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367 L F +T GDD DR L+KS G TYFA+D+AY K+ RGFD ++ + G+DH GYV R+ Sbjct: 284 ALWFATTNFGDDKDRVLVKSGGDLTYFASDIAYHDDKFRRGFDVVVDIWGADHHGYVPRM 343 Query: 368 EAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 +A AA+ + V+L +LV L + G I MS RAG F TL VV EVG+D+ RFM Sbjct: 344 KACVAALGRDPETSLKVILVQLVNLLKGGEQIAMSTRAGKFETLADVVAEVGADAARFMF 403 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP---DLDFDLFPRN 483 L RK+ LDFD VKE+S +NPV+YVQYA+AR +S+F +A + + +L + Sbjct: 404 LSRKSDSHLDFDLDAVKEKSMDNPVYYVQYAHARVKSLFAKAAERGVTPREATPELLSKL 463 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 P++ E +YP + +A P+ ++FYL DLA H +++ Sbjct: 464 DTPEDLELLKLLE-------QYPDTVASAARTFAPHLVSFYLRDLAGQLHRYYT------ 510 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + +LT+ RL L+ AVA+++ +GL+++GV +P++M Sbjct: 511 VNPVLASGDAELTVARLALLDAVATVVRNGLDLLGVSAPDKM 552 >gi|33591373|ref|NP_879017.1| arginyl-tRNA synthetase [Bordetella pertussis Tohama I] gi|33571015|emb|CAE40495.1| arginyl-tRNA synthetase [Bordetella pertussis Tohama I] gi|332380774|gb|AEE65621.1| arginyl-tRNA synthetase [Bordetella pertussis CS] Length = 595 Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 184/589 (31%), Positives = 302/589 (51%), Gaps = 49/589 (8%) Query: 10 RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69 +L + ++ + E + ++ +ERP+ AHG ++TN AM L++P +P +A+ IV Sbjct: 43 QLISLIQAAVAQCLPEAQ--AQVQLERPKVAAHGDIATNVAMQLAKPARRNPRELAQGIV 100 Query: 70 ARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 + P + IAG GFIN L+P+ + ++ ++ YGR G KV + Sbjct: 101 DALMAQPQARELIQDAEIAGPGFINFRLTPAARQAVVQAVASQADAYGR-APRNGEKVLV 159 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+HVGH R A +GD + L SG++VTRE+Y NDAG QI+ LA+SV R Sbjct: 160 EFVSANPTGPLHVGHARQAALGDAICRLYDASGWDVTREFYYNDAGNQIDNLAISVQAR- 218 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADK------YSSELLNFPEEKWLPIVKDYSVQ 239 + + + D P Y G Y+ + ++ A + + + L ++ ++V Sbjct: 219 GRGIAPDAPDYPADGYKGDYIVEIARDFAARKSVQASDGQPVTATGDLDSLDDIRAFAVA 278 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 + + DL+A + D + E + +++ +D L +G+ YE Sbjct: 279 YLRREQDLDLQAFGLAFDNYFLESSLYA--SGRVQETVDTLVAKGHTYE----------- 325 Query: 300 QKCDMDRKQLLFRSTMVG--DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 + L R+T +G DD DR + KS+G YTYF D+AY K K+ERGF + + + G Sbjct: 326 -----EGGALWLRTTELGTGDDKDRVMRKSEGGYTYFVPDVAYHKVKWERGFHHAVNIQG 380 Query: 358 SDHSGYVKRLEAVAAAV-SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 SDH G V R+ A + K +L ++V++ R G +K+SKRAG ++T+R ++D Sbjct: 381 SDHHGTVARVRAGLQGLAGIPKDFPAYVLHKMVKVMRGGEEVKISKRAGSYVTMRDLIDW 440 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG D+VR+ ++ R+ FD +S ENPV+Y+QYA+AR ++ + ++ Sbjct: 441 VGRDAVRYFLIQRRADTEFVFDIDLALSKSDENPVYYIQYAHARICTMIGNSGASAAEI- 499 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 SE L+ LAE+P+V+ A P+ +AF+L D AS FH + Sbjct: 500 ------AQADTALLTAPSEYALLQRLAEFPQVVALAAQELAPHHVAFWLRDCASDFHAWY 553 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R V + L + RL+L ++ +GL ++GV +P+ M Sbjct: 554 NAER-------VLVDEPALKLARLRLAATTRQVLANGLALLGVSAPDRM 595 >gi|306835846|ref|ZP_07468842.1| arginine--tRNA ligase [Corynebacterium accolens ATCC 49726] gi|304568263|gb|EFM43832.1| arginine--tRNA ligase [Corynebacterium accolens ATCC 49726] Length = 550 Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 185/582 (31%), Positives = 303/582 (52%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD ++ +K E+ + ++ +L D +ERPR+ HG +TN A+ +++ G +P Sbjct: 4 ADLATLVKESATEVMAEHDLDASVLPDTATVERPRNPEHGDYATNLALQVAKKAGANPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 + ++ + IAG GFIN+ L+ + +I++ I+ +G +YG N G K+ Sbjct: 64 FGGWLAEKLAEHDAIAEADIAGPGFINIRLAAAAQGEIVAQILQAGADYGSNDSFAGKKI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++ SG EVTREYY ND G QI+ + S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLTASGAEVTREYYFNDHGGQIDRFSRSLVA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + + +K S L + + V+ M Sbjct: 184 AAK------GEPTPEDGYGGDYIHDIASAVVEKNPSA-LEGDAAQVQEAFRADGVEMMFA 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L + D++ E+ + + ++ L +G++YE Sbjct: 237 QIKQSLHEFGVDFDVYFHENSLF--ESGAVDKALETLKSEGHLYEA-------------- 280 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 +ST GD DR ++KSDG+ Y A D+AY K++RG D IY++G+DH GY Sbjct: 281 --DNAWWLKSTDYGDSKDRVVVKSDGNAAYIAGDIAYVADKFDRGHDLNIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 V RL+A AAA+ + VL+ ++V L RDG P++MSKRAG IT+ +V +G D+ R Sbjct: 339 VPRLKAAAAALGYDADGVEVLIGQMVNLLRDGKPVRMSKRAGTVITIEDLVAAIGIDASR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ + +D D + QS +NPV+YVQY +AR SI R+A ++ + + + Sbjct: 399 YSLVRSSADQSIDIDLGLWESQSSDNPVYYVQYGHARLCSIGRKAAELG--VSSEGADLS 456 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ E E D LI L E+P V+ +A +EP+++A Y +LA VFH + + P Sbjct: 457 LLEHEREGD-----LIRTLGEFPAVVADAAELREPHRVARYAEELAGVFHRFYDTCQVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + RL L A ++++ L ++GV SP +M Sbjct: 512 K---AGEEEQPIHSARLALAEASRVVLSNALTMVGVSSPEKM 550 >gi|326771976|ref|ZP_08231261.1| arginine--tRNA ligase [Actinomyces viscosus C505] gi|326638109|gb|EGE39010.1| arginine--tRNA ligase [Actinomyces viscosus C505] Length = 561 Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 192/587 (32%), Positives = 310/587 (52%), Gaps = 37/587 (6%) Query: 6 DFSSRLKNYLKEIDCKI--KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 + ++ ++ L+E + + + +ERPR+ HG STN AM L++ G P Sbjct: 5 ELAAAIRTVLEEASAEGSLALPAAEIPDPRVERPRNRDHGDWSTNVAMQLAKKAGTKPRD 64 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +AEL+V R++ + SV +AG GF+N+ L + ++ SIV +G YGRN G + Sbjct: 65 LAELLVPRLEALDGIASVEVAGPGFLNIRLDAASAGELARSIVEAGEAYGRNDSLSGQHI 124 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+E+VSANPTGP+H+G R A VGD+LA +++ G +VTREYY ND G QI+ A S+ Sbjct: 125 NLEYVSANPTGPVHLGGARWAAVGDSLARILSACGAQVTREYYFNDHGTQIDRFARSLLA 184 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKEL-ADKYSS---ELLNFPEEKWLPIVKDYSVQ 239 + + PE Y G Y+ + +++ AD+ ++ + P+ + + + V Sbjct: 185 SAR------GQETPEDGYGGAYISEIAQQVTADELAAGRPDPATLPDAEATEVFRSRGVD 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M ++ +L A D+F ED H + I L +G + Sbjct: 239 LMFAAVKAELHAFRSDFDVFFHEDSLHT--SGAVERAIARLRERGVI------------- 283 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + R+T GDD DR L+KSDG+ YFAADLAY+ K ERG D IY++G+D Sbjct: 284 ---EERDGATWLRTTDFGDDKDRVLIKSDGNAAYFAADLAYYLDKRERGADCAIYLLGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 H GY+ R+ A+ AA + + +L+ +LV L R+G+P++MSKRAG +TL +VD VG Sbjct: 341 HHGYIGRMMAMCAAFGDTPGTNMQILIGQLVNLVRNGVPVRMSKRAGTIVTLEDLVDAVG 400 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ + ++D D + + +NPV+YVQYA+AR R++ R A + D + Sbjct: 401 VDAARYALARSSMDSMIDIDLDLLTSSTSDNPVYYVQYAHARTRNVARNAAEHGVSRDPN 460 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 P + D ++ L+ LA++P + A +E +++A YL LA+ +H + Sbjct: 461 EAPFEPGALD---DPADTALLGVLAQFPATVAQAAQLREQHRVARYLEQLAAAYHAWYGA 517 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R PR + + RL L AV ++ +GL+++GV +P M Sbjct: 518 TRVTPRGDDAVDSG---HVARLWLNDAVGQVLANGLDLLGVSAPERM 561 >gi|148272330|ref|YP_001221891.1| arginyl-tRNA synthetase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830260|emb|CAN01194.1| argS [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 554 Score = 541 bits (1395), Expect = e-151, Method: Composition-based stats. Identities = 193/558 (34%), Positives = 294/558 (52%), Gaps = 35/558 (6%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 D +V+ERPR+ HG +TN AM +++PLG DP TIA I + P V V +AG GF Sbjct: 31 PDMVVLERPRNRDHGDWATNIAMRIAKPLGEDPRTIAADIAEALGELPQVAKVDVAGPGF 90 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 IN+ L + + +IV +G YGR G ++N+EFVSANPTGP+H+G R A VGD Sbjct: 91 INITLEAAAAGALARTIVDAGPAYGRGHTLDGIRINLEFVSANPTGPIHLGGVRWAAVGD 150 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 +LA ++ G +VTREYY ND G+QI+ A S+ + D PE Y G Y+ Sbjct: 151 SLARILQAEGADVTREYYFNDHGSQIDRFARSLLASHL------GEDTPEDGYGGAYIGE 204 Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 + + + Y +L P E+ + + + M I+ L + D+F ED H Sbjct: 205 IAERVVAGYDGDLDALPREEQQEVFRSAGTELMFGEIKQKLHDFGVDFDVFFHEDSLH-- 262 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 + + + L G+V+E + + R+T GDD DR +++S Sbjct: 263 ESGAVDRAVARLKELGHVFE----------------EDGAVWLRTTTFGDDRDRVVIRST 306 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCE 387 G Y + DL Y+ K ERGF+ I ++G+DH GYV R+ A+A A + + +L+ + Sbjct: 307 GEPAYISGDLGYYLDKRERGFEQNIIMLGADHHGYVGRMMAMAEAFGDTPGVNLQILIGQ 366 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 +V L RDG P+KMSKRAG +TL +VD VG D+ R+ ++ + LD D + +++ Sbjct: 367 MVNLLRDGEPVKMSKRAGTIVTLDDLVDAVGVDAGRYSLVRSSADQNLDIDLAVLGKRTN 426 Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 +NPVFYVQYA+AR ++ R A D R+ E +E L+ L E+PR Sbjct: 427 DNPVFYVQYAHARTCAVDRNAAASGVD-------RSAFAPELLTHPTESALLGLLQEFPR 479 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 ++ A +EP+++A Y+ +LA +H + R PR L RL L AV Sbjct: 480 IVAQAAELREPHRVARYIEELAGSYHRWYDSCRVVPRG---DEEVTDLHRTRLWLNDAVR 536 Query: 568 SIINSGLNIIGVESPNEM 585 ++ +GL+++GV +P M Sbjct: 537 QVVANGLDLVGVSAPERM 554 >gi|227495013|ref|ZP_03925329.1| arginine--tRNA ligase [Actinomyces coleocanis DSM 15436] gi|226831465|gb|EEH63848.1| arginine--tRNA ligase [Actinomyces coleocanis DSM 15436] Length = 559 Score = 541 bits (1394), Expect = e-151, Method: Composition-based stats. Identities = 193/587 (32%), Positives = 305/587 (51%), Gaps = 41/587 (6%) Query: 6 DFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 D + L E +V + +I IV+ERPR+ HG +TN AM L++ G++P Sbjct: 5 DLEQLIHTVLTEAVAAGEVNLTDDQIPADIVVERPRNREHGDWATNIAMRLAKAAGMNPR 64 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +A I R+ ++ V +AG GFIN+ L + ++ +I+ + YG N G Sbjct: 65 ELAVNIAFRLAEKEGIEKVDVAGPGFINITLDAATAGELARTILTAKESYGTNQSQTGKH 124 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VN+EFVSANPTGP+H+G R A VGDTLA L+ SG +VTREYY ND GAQI+ A S+ Sbjct: 125 VNLEFVSANPTGPIHLGGARWAAVGDTLARLLEASGAKVTREYYFNDHGAQIDRFARSLV 184 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSE----LLNFPEEKWLPIVKDYSV 238 R + + PE Y G Y++ + ++ + PE + + V Sbjct: 185 ARAK------GEEAPEDGYGGQYIEDIANQVMADAQEAGEPNPVTLPEAEATEAFRARGV 238 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + M I+ L +++ D++ ED H + + I+ L +G +YE Sbjct: 239 ELMFAEIKKKLAEFHVEFDVYFHEDHLHT--TGAVAEAIEKLRDRGVIYEA--------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 RST GDD DR ++KSDG YFA D+AY+ K ERG D ++ ++G+ Sbjct: 288 -------EGATWLRSTDFGDDKDRVIIKSDGDAAYFAGDIAYYLNKRERGADQVVIMLGA 340 Query: 359 DHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 DH GY+ R+ A+ AA +K + +L+ +LV L +G P++MSKRAG +TL +V+ V Sbjct: 341 DHHGYIGRMYAMCAAFGDKPGDNLELLIGQLVNLLSNGEPLRMSKRAGTIVTLDDLVEAV 400 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G D+ R+ ++ + +D D + S +NPV+YVQYA+AR ++ R A + +D Sbjct: 401 GVDAARYALVRSSIDQAIDIDLDLLASHSNDNPVYYVQYAHARTCNVSRNAAEHGVSMDA 460 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 P E+ ++ QL+ LA++P ++ A +EP+++A YL LA+ +H + Sbjct: 461 GFAP------EALDHAADAQLLGALAQFPAMVAQAAELREPHRVARYLESLAASYHTWYG 514 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 R PR + + RL L AV ++ +GL ++GV +P Sbjct: 515 QCRVTPRADELVETG---HVARLWLNEAVKQVLANGLALLGVSAPER 558 >gi|160934061|ref|ZP_02081448.1| hypothetical protein CLOLEP_02924 [Clostridium leptum DSM 753] gi|156866734|gb|EDO60106.1| hypothetical protein CLOLEP_02924 [Clostridium leptum DSM 753] Length = 563 Score = 541 bits (1394), Expect = e-151, Method: Composition-based stats. Identities = 191/582 (32%), Positives = 306/582 (52%), Gaps = 31/582 (5%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 D + + L + + + IE P D +HG +TN AM+ ++ + P IA Sbjct: 11 DLRQIILDALGRAVAEKALPMEPAPDFTIETPADPSHGDFATNVAMVSAKAFHMAPRKIA 70 Query: 66 ELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 E + + + IAG GFIN +LSP + +L I YGR+ GKG K+N Sbjct: 71 EALSPYFEFSSTYFEKFEIAGPGFINFFLSPRFYAAVLQDIEALQDGYGRSDFGKGKKIN 130 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGPMH+G+ R +GD LA+++ +GY+V+RE+YINDAG QI+ ALS+ R Sbjct: 131 VEFVSANPTGPMHMGNARGGALGDCLAAVLDAAGYQVSREFYINDAGNQIDKFALSLDIR 190 Query: 185 YQQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 YQQ ++ +PE Y G + +E AD Y L +E+ + D+++ + Sbjct: 191 YQQIFKGEEAVPMPEDCYQGADILERAQEFADLYGDSCLEKSQEERQKALVDFALPKNIA 250 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 ++ DLK I++D + E H + I+D + L +G YE Sbjct: 251 KMQSDLKKYRIEYDTWFHESVLH--NDGEIQDTLKILMEKGMTYEL-------------- 294 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 L +++T G + D L++ +G+ TYFAAD+AY + K++RGFD I + G+DH G+ Sbjct: 295 --DGALWYKATDFGAEKDEVLVRKNGNPTYFAADIAYHRNKFQRGFDRCIDIWGADHHGH 352 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 V R++ AV ++++V+L +LV+L R+G ++MSKR G I L ++DEV D+ R Sbjct: 353 VARMKGAMNAVGLDGSKLDVVLMQLVKLVRNGEIVRMSKRTGKAIQLADLLDEVPVDAAR 412 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 F+ R+ + ++FD +Q +NPV+YVQYA+AR SI +A + + Sbjct: 413 FLFNMREANSQMEFDLDLAVQQDAQNPVYYVQYAHARICSIL-KALEKDGVVKRACSEEE 471 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ EL LI HLA Y + +A +P ++ Y+ DLA++FH ++ R Sbjct: 472 LLL---LVQPEELSLIRHLAAYTGEVVSAAKDYDPARITRYVIDLANLFHKFYNACR--- 525 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V+ L RL L AV ++I++ L + + +P M Sbjct: 526 ----VKGEEDSLCQARLTLCVAVKTVIHNVLTMFKISAPESM 563 >gi|225017221|ref|ZP_03706413.1| hypothetical protein CLOSTMETH_01147 [Clostridium methylpentosum DSM 5476] gi|224949996|gb|EEG31205.1| hypothetical protein CLOSTMETH_01147 [Clostridium methylpentosum DSM 5476] Length = 562 Score = 541 bits (1394), Expect = e-151, Method: Composition-based stats. Identities = 203/586 (34%), Positives = 321/586 (54%), Gaps = 42/586 (7%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 L + K + + L IE P D +HG + N AM+ +R L P IAE Sbjct: 12 LRELLTAAAQGAMEKGLLPQAELPAFTIEIPADSSHGDFAANLAMVSARAFKLAPRKIAE 71 Query: 67 LIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 ++ + ++ D IAG GFIN +L+ S+ ++ ++V G +YGR+ G G KV + Sbjct: 72 ILCGELNLNGTFFDRWEIAGPGFINFFLNQSWFGSVVEAVVQEGADYGRSEFGGGKKVMV 131 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGPMH+G+ R +GD LAS++ ++GY+VT+E+YINDAG QI ALS+ RY Sbjct: 132 EFVSANPTGPMHIGNARGGAMGDCLASVLDWAGYDVTKEFYINDAGNQIEKFALSLDVRY 191 Query: 186 QQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 QQ D+ LPE Y G +K + AD Y + L+ +++ + DY++ + Sbjct: 192 QQIYKGEDAVPLPEDAYQGADIKVHAQNFADLYGDKFLDATQQERRKALVDYALPINIAN 251 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 ++ DL I++D++ E H + ++ I+D L +G YE Sbjct: 252 LKTDLAKYRIEYDVWFKESVLH--EEGQVQKIVDILTERGLTYE---------------- 293 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGY 363 + ++S+ G + D L++++G TYFAAD+AY K+ RGFD +I + G+DH G+ Sbjct: 294 KEGAIWYKSSEYGSEKDDVLVRANGIPTYFAADIAYHYNKFAVRGFDRVINIWGADHHGH 353 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 V RL+ AV ++++V+L ++VRL RDG P+K+SKR+G ITL ++DEV D+ R Sbjct: 354 VARLKGAMDAVGLDGSKLDVVLMQMVRLMRDGEPVKVSKRSGKSITLVSLLDEVPIDAAR 413 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF----PDLDFDL 479 F+ R+ + LDFD EQS +NPV+YVQYA+AR SI ++ D DF L Sbjct: 414 FIFNLREANSHLDFDLDLAVEQSSQNPVYYVQYAHARICSILKKLAQEGFSPQEDADFGL 473 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 E++LI H+A P I A A +P ++ Y DLA++FH ++ Sbjct: 474 LTA----------PEEIELIRHIARLPGDIVEAAKAYDPARITRYSLDLATLFHKFYNAC 523 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V+ ++ +LT RL L AV +++ + L+++ +++P M Sbjct: 524 K-------VKGDDERLTTARLTLCDAVRTVLENVLSMLKIDAPESM 562 >gi|315604827|ref|ZP_07879886.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310] gi|315313498|gb|EFU61556.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310] Length = 559 Score = 541 bits (1393), Expect = e-151, Method: Composition-based stats. Identities = 193/588 (32%), Positives = 308/588 (52%), Gaps = 41/588 (6%) Query: 6 DFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + +++ L + ++ + D + +ERPR HG +TN AM L + G+ P Sbjct: 5 ELACLIRSTLLDAAAAGRISIDPALVPDPVTVERPRIREHGDWATNVAMQLGKKAGMAPR 64 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 A+++ + D+DSV +AG GFIN+ L ++ +IV +G YGRN G Sbjct: 65 DFAQILAEDLSGAEDIDSVEVAGPGFINIRLGAGAAGELARTIVEAGAAYGRNETLAGRS 124 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 +N+E+VSANPTGP+H+G R A VGD+LA LMA SG VTREYY ND G+QI+ + S++ Sbjct: 125 INLEYVSANPTGPVHLGSVRWAAVGDSLARLMAASGAAVTREYYFNDHGSQIDHFSHSLY 184 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS----ELLNFPEEKWLPIVKDYSV 238 R ++PE Y G Y+ + +++ + + + PEE+ + + + V Sbjct: 185 ARAM------GREVPEDGYGGQYIADIAEQVRADARAAGEPDPITLPEEEAIEVFRARGV 238 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + M I++ L + + D+F ED H + D I L +G +++ Sbjct: 239 ELMFAEIKERLHSFRVDFDVFFHEDSLH--SSGAVADAIARLRERGEIFD---------- 286 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + + R+T GDD DR L+KSDG YFA D+AY+ K ERG D IY++G+ Sbjct: 287 ------EGGAVWLRTTTYGDDKDRVLIKSDGQAAYFAGDVAYYLNKRERGADAAIYLLGA 340 Query: 359 DHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 DH GY+ R+ A+ AA +K + +L+ +LV L +DG P++MSKRAG +TL +VD V Sbjct: 341 DHHGYIGRMMAMCAAFGDKPGVNLQILIGQLVNLVKDGEPVRMSKRAGTIVTLDDLVDAV 400 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G D+ R+ ++ +D D + + S +NPV+YVQYA+ R ++ R A D Sbjct: 401 GVDAARYALVRVSMDTQVDIDLDLLSQHSNDNPVYYVQYAHVRTCNVARNAAAHGVSRDA 460 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 P + + L+ LA++P + AT +EP+++A YL LA+ +H + Sbjct: 461 GFDPAALDTEADS------ALLGALAQFPAQVAQATELREPHRIARYLESLAATYHAWYG 514 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R PR + RL L AV ++ +GL ++GV +P M Sbjct: 515 QCRVTPRS---DDPVEAGHVARLWLNDAVTQVLRTGLGLLGVSAPERM 559 >gi|303233374|ref|ZP_07320043.1| arginine--tRNA ligase [Atopobium vaginae PB189-T1-4] gi|302480503|gb|EFL43594.1| arginine--tRNA ligase [Atopobium vaginae PB189-T1-4] Length = 615 Score = 541 bits (1393), Expect = e-151, Method: Composition-based stats. Identities = 191/629 (30%), Positives = 305/629 (48%), Gaps = 68/629 (10%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + + +K + + + +ERP D +HG S+ AM +R + P IA+ Sbjct: 5 LENLVLQAIKNAQAANVLPEFEVSDCGLERPADTSHGDWSSTIAMRSARLAHMAPAKIAQ 64 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 IV + ++ V IAG GFIN YLS S +++++ + +G +GKG K+N E Sbjct: 65 AIVDHMPETTEIAKVEIAGPGFINFYLSTSASNDVINAVRSARDRWGACNMGKGFKINYE 124 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 F+SANPTGP+HVGH R A +GD++ +++ F GY+V REYYIND G+Q++ SV RY Sbjct: 125 FISANPTGPLHVGHGRWAALGDSVCNVLDFCGYDVFREYYINDHGSQMDVFGSSVSMRYA 184 Query: 187 QALY-------------------------NNDSDLPEGY--------------YPGVYLK 207 Q + + + PE + Y G Y+ Sbjct: 185 QLCSIIADKHLSAKQALELLLADRNAYVDDEEDEHPENHPYMDAFNEHLGGNSYGGDYII 244 Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 + E + E++ ++ + QAM+K I++ D++ SE ++ Sbjct: 245 EIAYEFYVQDGDSWAQVSEDERNAAFRERAYQAMLKRIQNTCHTSRCDFDLWFSERSLYQ 304 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 D S + L + GY+Y+ D L F+ST GDD DR L Sbjct: 305 KDESGTSKVDRAFARLEKMGYLYK---------------TDDGALWFKSTEFGDDKDRVL 349 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 +KS+G YTYFA+D+AY K++RG I + G+DH GY+ R+ V A+ K + V Sbjct: 350 IKSNGEYTYFASDVAYHWDKFDRGAQQSIDLWGADHHGYIARVTNVCDALGF-KGKFIVD 408 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L + V L R+G P++MSKR G IT ++ EVG D+ R+ ++ + +++ +DFD VKE Sbjct: 409 LGQFVNLLRNGEPVRMSKRKGTMITFEELLHEVGVDATRYTLISKSSNQTIDFDIEAVKE 468 Query: 445 QSKENPVFYVQYAYARCRSIFRQA----KDIFPDLDFDLFPR----NVIPQESEFDTSEL 496 +S NPVFYVQYA+AR SI R A ++ L D N + E Sbjct: 469 KSNSNPVFYVQYAHARICSILRNAAGVTEEEAKTLGMDEVAARAVGNDVDLSLLVHPMEA 528 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 L L+E+P ++ + + P+++ ++ +LA FHG +++ + + + L+ Sbjct: 529 ALSRKLSEFPELVASCARDRAPFRITHFVEELAGAFHGFYANCQVLSSEG--RPVDEALS 586 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL AV + L +IGV +P M Sbjct: 587 HARLAACDAVRINLEVALKLIGVSAPEVM 615 >gi|290967899|ref|ZP_06559449.1| arginine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L] gi|290782038|gb|EFD94616.1| arginine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L] Length = 554 Score = 541 bits (1393), Expect = e-151, Method: Composition-based stats. Identities = 208/585 (35%), Positives = 311/585 (53%), Gaps = 31/585 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + ++ + + K+ + IV+E P G +TN AM +R Sbjct: 1 MDIKEAVIQGIRTAMDKAVAAGKLPEGDYPDIVLEIPPQKEFGDFATNIAMQSARTAHCA 60 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P IAE IV +K P +D +AG GFIN++L ++L I+ YG Sbjct: 61 PRHIAESIVEELKA-PWLDKAEVAGAGFINIFLDSRVFYQVLQHILTVQEAYGTCAERPE 119 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 V +EFVSANPTGP+HVGH R A G +L +L+ +GY+V EYYINDAG Q++ LA S Sbjct: 120 DTVQVEFVSANPTGPLHVGHGRGAAYGSSLVNLLRMAGYKVEAEYYINDAGKQMDNLAAS 179 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V RY + L+ +++PE Y G + K +A + L E + L I KD + + Sbjct: 180 VNARYLE-LFGRKAEIPENGYHGQDIIDTAKAIAAQDGDRYLQVSEAERLAIFKDRAYEE 238 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 +K ++ DL ++Q+D + SE H P IR D L +G VYE Sbjct: 239 KLKALQKDLARFHVQYDHWFSERTLH---PQGIRQACDALRERGKVYE------------ 283 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 L +ST GDD DR +++ +G TY AAD+AY K KY+R F MI + G+DH Sbjct: 284 ----KDGALWLQSTAYGDDKDRVVIRENGDPTYLAADIAYHKNKYDRHFKTMINIWGADH 339 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GYV R+ A AA+ ++ VLL ++V L+RDG P+KMSKR G ITL +++EVG+D Sbjct: 340 HGYVARVRAAMAALGYDTKRLEVLLLQMVSLFRDGKPVKMSKRTGQAITLNELIEEVGTD 399 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 + R+ + R LDFD S ENPV+Y+QYA+AR SI+RQA++ L Sbjct: 400 AARYFFIMRSLDTQLDFDLDLAMSHSNENPVYYIQYAHARIYSIYRQAEEAGIALPQ--- 456 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 + + + +EL LI +A +P I+ A A+ P+++A ++Y+ A +FH ++H R Sbjct: 457 RWEAVQWDLLQEEAELALIKKMAAFPEEIQRAAAARAPHRIAHFVYETAGLFHAFYNHCR 516 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +R+L + RL LV AV I + L ++G+ +P +M Sbjct: 517 -------IIQEDRELAIARLGLVTAVRFTIANSLAVLGISAPQQM 554 >gi|25027832|ref|NP_737886.1| arginyl-tRNA synthetase [Corynebacterium efficiens YS-314] gi|259506223|ref|ZP_05749125.1| arginine--tRNA ligase [Corynebacterium efficiens YS-314] gi|38372529|sp|Q8FQ57|SYR_COREF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|23493115|dbj|BAC18086.1| putative arginyl-tRNA synthetase [Corynebacterium efficiens YS-314] gi|259166200|gb|EEW50754.1| arginine--tRNA ligase [Corynebacterium efficiens YS-314] Length = 550 Score = 540 bits (1392), Expect = e-151, Method: Composition-based stats. Identities = 189/582 (32%), Positives = 304/582 (52%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD ++ +K E+ ++ +L ++IV+ERPR+ HG +TN A+ +++ +G+ P Sbjct: 4 ADLATLIKQTAVEVLTSRDLDASMLPEQIVVERPRNPEHGDYATNVALQVAKKVGVTPRD 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 + + + D +DS IAG GFIN+ L+ + +I++ I+ G ++G + V Sbjct: 64 LGTWLAEALAADDSIDSAEIAGPGFINIRLAAAAQGEIVAKILEQGEKFGTSDHLSHLDV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++ +G +VTREYY ND G QI+ ALS+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEAAGAKVTREYYFNDHGRQIDRFALSLLA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y++ + + + K+ L PEE + + V+ M Sbjct: 184 AAK------GEPTPEDGYGGEYIREIAEAIVAKHPDALDRTPEE-TQELFRSEGVEMMFS 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 IR+ L D++ E+ + + + L G +YE Sbjct: 237 HIRESLHEFGTDFDVYFHENSLF--ESGAVDRAVQKLKDNGNLYES-------------- 280 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 RST GDD DR ++KSDG Y A D+AY + K+ERG + IY++G+DH GY Sbjct: 281 --DGAWWLRSTDFGDDKDRVVIKSDGDAAYIAGDIAYVQDKFERGHNLNIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA+ + VL+ ++V L RDG ++MSKRAG +TL +V+ +G D+ R Sbjct: 339 IARLKAAAAALGYAPEGVEVLIGQMVNLLRDGTAVRMSKRAGTVVTLDDLVEAIGIDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ LD D + QS +NPV+YVQY +AR SI R+A D+ + ++ + Sbjct: 399 YSLIRSSVDSSLDIDLGLWESQSSDNPVYYVQYGHARLCSIARKAADLG--VTYEDADLS 456 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ + E D LI L E+P VI A +EP+++A Y +LA FH + + P Sbjct: 457 LLTHDREGD-----LIRTLGEFPAVIRAAADLREPHRIARYAEELAGTFHRFYDSCQILP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + RL L A + + L ++GV +P +M Sbjct: 512 K---ADEEKAPIHAARLALAAATRQTLANALALVGVSAPEKM 550 >gi|239906966|ref|YP_002953707.1| arginyl-tRNA synthetase [Desulfovibrio magneticus RS-1] gi|259511642|sp|C4XSX9|SYR_DESMR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|239796832|dbj|BAH75821.1| arginyl-tRNA synthetase [Desulfovibrio magneticus RS-1] Length = 551 Score = 540 bits (1392), Expect = e-151, Method: Composition-based stats. Identities = 205/587 (34%), Positives = 316/587 (53%), Gaps = 50/587 (8%) Query: 9 SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68 + L++ L + + + IE PRD AHG L+TN AM+ S+ P +AE + Sbjct: 5 AILRDLLASALENQGIAWPV--KTTIEPPRDKAHGDLATNVAMMASKAAKKPPRELAESL 62 Query: 69 VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128 + DP + SV +AG GF+N+ +P++ ++ + + +G YG IG+G K+ +EFV Sbjct: 63 RQALAADPRLASVEVAGPGFLNVAFTPAFWQETVCDVAKAGDGYGLLDIGQGVKIQVEFV 122 Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188 SANPTGP+H+GH R A VGD+LA ++ +G+ V EYYINDAG Q+ L +S+ +RY++ Sbjct: 123 SANPTGPLHIGHGRGAAVGDSLARVLRAAGFTVETEYYINDAGRQMRILGMSILYRYKEL 182 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248 + PE YY G Y+ + +++ D + +LL PE + I + + + ++ I+ D Sbjct: 183 I-GEPVTEPEDYYRGEYVIPLAQDMIDAHGRKLLEMPEAEATDICRLHGEREILAGIKKD 241 Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308 L+ + HD++ E + + L + Y+ Sbjct: 242 LEDFRVHHDVWFPESTLLA--AGAVDAAFNELRDKKLAYD----------------QDGA 283 Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLE 368 F ST GDD DR L+KS G TYFA+D+AY K+ RGFD ++ + G+DH GYV R++ Sbjct: 284 FWFASTAFGDDKDRVLVKSGGELTYFASDIAYHADKFRRGFDVVVDIWGADHHGYVPRMK 343 Query: 369 AVAAAVSEKK-AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 A +A+ A + V+L +LV L + G I MS RAG F TL VV EVG+DS RFM L Sbjct: 344 ACVSALGRDPEASLKVILVQLVNLLKGGEQIAMSTRAGKFETLADVVKEVGADSARFMFL 403 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487 RK+ LDFD VKE+S +NPV+YVQYA+AR RS+F +A++ + Sbjct: 404 SRKSDSHLDFDLDAVKEKSMDNPVYYVQYAHARVRSLFAKAQERGQAV------------ 451 Query: 488 ESEFDTSELQLIVH---------LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 +E L L+ L +YP + A P+ ++FYL DLA H +++ Sbjct: 452 -AETSPELLALLTTDEDLELLKLLEQYPDTVAAAARTFSPHLVSFYLRDLAGRLHRYYT- 509 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A + L RL+L+ AVA I +GL+++GV +P++M Sbjct: 510 -----VNPVLTAGSDDLASARLRLLDAVAQTIKNGLDLLGVSAPDKM 551 >gi|78049585|ref|YP_365760.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78038015|emb|CAJ25760.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 569 Score = 540 bits (1392), Expect = e-151, Method: Composition-based stats. Identities = 194/592 (32%), Positives = 309/592 (52%), Gaps = 37/592 (6%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 ++ A + + ++ + + L V+ERP+ HG +TNAAM+L++ + Sbjct: 7 HVKALLRALIGQGIEALRANGTLPADTLPPDFVVERPKTREHGDFATNAAMLLAKAARSN 66 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A+ +VA + DV V IAG GFIN +L+P+ ++ ++ ++ G +YGR L G G Sbjct: 67 PRALAQALVAALPASDDVAKVDIAGPGFINFHLAPTAYQRQVAHVIKQGHDYGRGLAGNG 126 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 V +E+VSANPTGP+HVGH R A +GD+LA ++ +G+ V RE+Y NDAG QI LALS Sbjct: 127 RSVGVEYVSANPTGPLHVGHGRAAAIGDSLARVLDANGWNVKREFYYNDAGVQIENLALS 186 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKD 235 V R Q L + PE Y G Y+ V D + + L ++ Sbjct: 187 VQAR-AQGLTPDSDGWPENGYRGDYIADVASAYLAGDTVDLEGHLVTGTKDPADLESIRR 245 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 ++V + DL A + DI+ E ++ + + + L G+ YE Sbjct: 246 FAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK--DGKVEEAVQKLIASGHTYE------- 296 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 + L +ST GDD DR + KSDG+YTYF D+AY K++RG++ I Sbjct: 297 ---------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGYERAITE 347 Query: 356 MGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 +G+DH G + R+ A A+ + +L ++V + R G +K+SKRAG ++TLR + Sbjct: 348 LGADHHGSLTRVRAGLQAMELGIPQGWPEYVLHQMVTVMRGGEEVKLSKRAGSYVTLRDL 407 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 ++E +D+VR+ ++ RK L FD + QS +NPVFYVQYA+AR S+ RQA++ Sbjct: 408 IEETSADAVRWFLIARKPDSQLTFDIDLARAQSNDNPVFYVQYAHARVCSVLRQAQEKGY 467 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 D + D L +++ L+ YP V+E A A EPY++A YL +LA FH Sbjct: 468 KYDQ---AHGLAELACLDDEHSLAVMLELSRYPEVVEIAGQALEPYQIAQYLRELAHAFH 524 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + V ++ +L L A ++ +GL ++GV +P +M Sbjct: 525 TWYHNSK-------VLVDDAAERDAKLTLAVATQQVLANGLELLGVSAPEKM 569 >gi|332654228|ref|ZP_08419972.1| arginine--tRNA ligase [Ruminococcaceae bacterium D16] gi|332517314|gb|EGJ46919.1| arginine--tRNA ligase [Ruminococcaceae bacterium D16] Length = 582 Score = 540 bits (1391), Expect = e-151, Method: Composition-based stats. Identities = 187/587 (31%), Positives = 307/587 (52%), Gaps = 20/587 (3%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 A + + ++ + + + IE P+D AHG +++ AM ++ L P I Sbjct: 10 AQVAQLTQQAYEKAAQAGLLPEGAQVKATIEIPKDTAHGDYASSFAMAGAKALHKAPRAI 69 Query: 65 AELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 A+ IV ++++ V IAG GF+N L P + ++LS++ G EYG N G G KV Sbjct: 70 AQAIVDNLELEGSYFQKVEIAGPGFLNFTLGPKWYGEVLSAVEQEGAEYGANTEGNGEKV 129 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EFVSANPTGPMH+G+ R V+GDTLA+++ G +E+Y+NDAG QI+ A+S+ Sbjct: 130 MVEFVSANPTGPMHMGNARGGVLGDTLANVLKRDGCNTWKEFYVNDAGNQIHKFAVSINA 189 Query: 184 RYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 RY Q + ++ PE Y G +K + + + DK+ + PEE+ L + +Y + + Sbjct: 190 RYMQLIVGEENFPFPEEGYHGDDIKELAQAIYDKHGDSWKDLPEEERLDKLAEYGLSVNI 249 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE--GILPPPKSKTTQ 300 + DLK I +D + E H + + + ++ L ++G+ YE G L +K + Sbjct: 250 PRMESDLKRYGIVYDQWFFESSLH--NSGYVAETVELLEKKGWTYEKDGALWLNTTKLLK 307 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSD 359 + M + + + D D L + +G YTYFAAD+AY + K RGFD I + G+D Sbjct: 308 EKFMREGKTQEQVDKL-DLKDDVLRRGNGFYTYFAADIAYHRNKLAVRGFDKAINIWGAD 366 Query: 360 HSGYVKRLEAVAAAVSEK-KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 H G+V RL+A + ++ V+L +LV L +DG P++MSKR+G I L ++DE+ Sbjct: 367 HHGHVARLQAALDGLGLDGSHRLVVVLMQLVNLMQDGKPVRMSKRSGKTIALHDLLDEIS 426 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ R ++ LDFD + ENPV+YVQYA+AR S+ + + + Sbjct: 427 VDAARYFFNSRASTSPLDFDLDLAVREDSENPVYYVQYAHARICSLIARLAEEGAQVP-- 484 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + EL LI LA++P I A +P ++ YL LA FH ++ Sbjct: 485 --QAGDVDAAVLNTPEELALIKALAQFPEEIHLAARDYDPSRINRYLVALAGDFHRFYNA 542 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R ++ ++ RL+L V S++ +G+ ++GV +P +M Sbjct: 543 CR-------IKGEEPQVLGARLKLADTVRSVLANGMGLLGVSAPEKM 582 >gi|21233284|ref|NP_639201.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770242|ref|YP_245004.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. 8004] gi|188993440|ref|YP_001905450.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. B100] gi|23822184|sp|Q8P455|SYR_XANCP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|81303810|sp|Q4UPN9|SYR_XANC8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|229558815|sp|B0RXM6|SYR_XANCB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|21115122|gb|AAM43092.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575574|gb|AAY50984.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. campestris str. 8004] gi|167735200|emb|CAP53412.1| unnamed protein product [Xanthomonas campestris pv. campestris] Length = 562 Score = 540 bits (1391), Expect = e-151, Method: Composition-based stats. Identities = 193/591 (32%), Positives = 307/591 (51%), Gaps = 37/591 (6%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 + A + + ++ + + L V+ERP+ HG +TNAAM+L++ +P Sbjct: 1 MKAQLRALIGQGIEALRANGTLPADTLPPDFVVERPKTREHGDFATNAAMLLAKAARSNP 60 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +A+ ++A + DV V IAG GFIN +L+P+ ++ + ++ G +YGR L G G Sbjct: 61 RALAQALLAALPASDDVARVEIAGPGFINFHLTPAAYQREVIHVIKQGHDYGRGLAGNGR 120 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 V +E+VSANPTGP+HVGH R A +GD+LA ++ +G+ V RE+Y NDAG QI LALSV Sbjct: 121 SVGVEYVSANPTGPLHVGHGRAAAIGDSLARVLDANGWNVKREFYYNDAGVQIENLALSV 180 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDY 236 R Q L + + PE Y G Y+ V K D + + L ++ + Sbjct: 181 QAR-AQGLTPDSAGWPENGYRGDYIADVAKAYLAGDTVDLEGHLVTGTKDPADLESIRRF 239 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 +V + DL A + DI+ E ++ + + + L G+ YE Sbjct: 240 AVAYLRNEQNHDLAAFRVDFDIYFLESSLYK--DGKVDEAVQKLIASGHTYE-------- 289 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + L +ST GDD DR + KSDG+YTYF D+AY K++RG++ I + Sbjct: 290 --------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGYERAITEL 341 Query: 357 GSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414 G+DH G + R+ A A+ + +L ++V + R G +K+SKRAG ++TLR ++ Sbjct: 342 GADHHGSLTRVRAGLQAMELGIPQGWPEYVLHQMVTVMRGGEEVKLSKRAGSYVTLRDLI 401 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 +E +D+VR+ ++ RK L FD + QS +NPVFYVQYA+AR S+ RQA++ Sbjct: 402 EETSADAVRWFLIARKPDSQLTFDIDLARAQSNDNPVFYVQYAHARVCSVLRQAQEKGLK 461 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 D + D L L++ L+ Y V+E A EPY++A YL +LA FH Sbjct: 462 YDQ---THGMAELARLDDEHSLALMLELSRYAEVVELAGQTLEPYQIAQYLRELAHAFHT 518 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + V ++ +L L A ++ +GL ++GV +P +M Sbjct: 519 WYHNSK-------VLVDDAAERDAKLTLAVATQQVLANGLELLGVSAPEKM 562 >gi|284032952|ref|YP_003382883.1| arginyl-tRNA synthetase [Kribbella flavida DSM 17836] gi|283812245|gb|ADB34084.1| arginyl-tRNA synthetase [Kribbella flavida DSM 17836] Length = 552 Score = 539 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 199/583 (34%), Positives = 313/583 (53%), Gaps = 38/583 (6%) Query: 6 DFSSRLKNYLKEI--DCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 + ++ L + D I V+ + + +ERP++ HG +TN AM L + GL+P Sbjct: 5 QLAEKILQALTALVDDGTITVDGGLPRELKVERPKNPEHGDYATNVAMQLGKRSGLNPRR 64 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 AEL+ A++ D + +V IAG GFINL ++ KI +IV +G YG + +G + Sbjct: 65 FAELLAAKLDSDDAITAVEIAGPGFINLRVAADAQGKIAQAIVDAGPAYGSSDSLQGQAI 124 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EF+SANPTGP+H+GH R A VGD LA ++A +G VTRE+Y+ND GAQ++ S+ Sbjct: 125 NLEFISANPTGPLHLGHTRWAAVGDALARVLAKAGAVVTREFYVNDRGAQMDKFGASLKA 184 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 Q +PE Y G Y+ + + + + + P+ + ++ + +K Sbjct: 185 AAQ------GQPIPEDGYHGAYILELAERIVAEV-PGITELPDAEQTVAFREAGYERQLK 237 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 + L+ + D++ SE H + + I+ L QG++Y+ Sbjct: 238 EQQAQLEHFRTKFDVWYSERSLH--EQDGVGHAIEKLRGQGHLYD--------------- 280 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 D L R+T DD DR L++S+G TYFA+D AY+ K ERGF+ IY++G+DH GY Sbjct: 281 -DDGALWMRTTDFTDDKDRVLIRSNGEPTYFASDAAYYVNKRERGFEVAIYLLGADHHGY 339 Query: 364 VKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 V RL+A+AA + I +L+ +LV++ + G +K+SKRAG +TL +V+E G D + Sbjct: 340 VNRLKAIAACAGDDPEHNIEILIGQLVKILKGGEEMKLSKRAGTIVTLAELVEEGGVDPL 399 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 R+ + L D ++ Q ENPV+YVQYA+AR SI R A D+ LD F Sbjct: 400 RYTLCRYPVDSPLTLDIEEMTRQVSENPVYYVQYAHARLASILRNADDLGIKLDE--FDP 457 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 ++ + E D L+ LAE+PR++ A +EP+++A YL D AS FH + R Sbjct: 458 GLLSHDREGD-----LLRALAEFPRIVATAAELREPHRIARYLEDTASAFHKFYDSCRVL 512 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 PR + RL LV A +++ +GL+++GV +P M Sbjct: 513 PRG---DEEVEPVHKARLTLVGATRTVLANGLDLLGVSAPERM 552 >gi|188578900|ref|YP_001915829.1| arginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A] gi|109895055|sp|Q5H5M2|SYR_XANOR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|238689549|sp|B2SS22|SYR_XANOP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|188523352|gb|ACD61297.1| arginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 562 Score = 539 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 191/591 (32%), Positives = 307/591 (51%), Gaps = 37/591 (6%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 + A + + ++ + + L V+ERP+ HG +TNAAM+L++ +P Sbjct: 1 MKALLRALIGQGIEALRANGTLPGDTLPPDFVVERPKTREHGDFATNAAMLLAKAARSNP 60 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +A+ ++ + DV V IAG GFIN +L+P+ ++ ++ ++ G +YGR L G G Sbjct: 61 RALAQALLTALPDSNDVTKVEIAGPGFINFHLAPTAYQREVAHVIKQGHDYGRGLAGNGR 120 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 V +E+VSANPTGP+HVGH R A +GD+LA ++ +G+ V RE+Y NDAG QI LALSV Sbjct: 121 SVGVEYVSANPTGPLHVGHGRAAAIGDSLARVLDANGWNVKREFYYNDAGVQIENLALSV 180 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDY 236 R Q L + + PE Y G Y+ V D + + L ++ + Sbjct: 181 QAR-AQGLTPDSAGWPENGYRGDYIADVANAYLTGDTVDMEGHLVTGTKDPADLESIRRF 239 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 +V + DL A + DI+ E ++ + + + L G+ YE Sbjct: 240 AVAYLRNEQNHDLAAFRVDFDIYFLESSLYK--DGKVEEAVQKLIASGHTYE-------- 289 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + L +ST GDD DR + KSDG+YTYF D+AY K++RG++ I + Sbjct: 290 --------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGYERAITEL 341 Query: 357 GSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414 G+DH G + R+ A A+ + +L ++V + RDG +K+ KRAG ++TLR ++ Sbjct: 342 GADHHGSLTRVRAGLQAMELGIPQGWPEYVLHQMVTVMRDGEEVKLGKRAGGYVTLRDLI 401 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 +E +D+VR+ ++ RK L FD + QS +NPVFYVQYA+AR S+ RQA++ Sbjct: 402 EETSADAVRWFLIARKPDSQLTFDIDLARAQSNDNPVFYVQYAHARVCSVLRQAQEKGYK 461 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 D + D L +++ L+ YP V+E A EPY++A YL +LA FH Sbjct: 462 YDQ---VHGLAELARLDDEHSLAVMLELSRYPEVVEIAGQTLEPYQIAQYLRELAHAFHT 518 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + V ++ +L L A ++ +GL ++GV +P +M Sbjct: 519 WYHNSK-------VLVDDAAERDAKLTLAVATQQVLANGLELLGVSAPEKM 562 >gi|303238405|ref|ZP_07324940.1| arginyl-tRNA synthetase [Acetivibrio cellulolyticus CD2] gi|302594109|gb|EFL63822.1| arginyl-tRNA synthetase [Acetivibrio cellulolyticus CD2] Length = 565 Score = 539 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 187/586 (31%), Positives = 321/586 (54%), Gaps = 31/586 (5%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L + S +KN L ++ + + IVIE PR+ HG STN AM ++ P Sbjct: 8 LKSQISEVVKNSLSRAVASGELPEFEVGEIVIETPREKEHGDFSTNIAMQAAKAAKKAPR 67 Query: 63 TIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 IA++I+ ++ + + V AG GFIN YL+ +L L +I +YG +GKG+ Sbjct: 68 QIADIIIKNMEFEGTYVEKVETAGPGFINFYLNNLWLYDTLKTIQTMKDKYGEINVGKGS 127 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 KV +EFVSANPTGP+H+G+ R +GD +AS+++ +GY+VTRE+Y+NDAG QI +S+ Sbjct: 128 KVMVEFVSANPTGPLHMGNARGGALGDCIASVLSKAGYDVTREFYVNDAGNQIEKFGISL 187 Query: 182 FWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 RY Q L D+ + PE Y G + K+ +LL+ E+ + ++++ Sbjct: 188 EARYIQQLKGEDAVEFPEDGYHGEDIIEHMKDYIAINGDKLLSVDSEQRRKELVEFALPR 247 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 ++ IR +++ ++ D++ SE + D ++D ++ L G+ YE Sbjct: 248 NIERIRSGMESYGVKFDVWFSEQSLY--DSGELKDTLELLKNNGHTYE------------ 293 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSD 359 + F+++ +G + D +++++G TYFA+D+AY K K+ +R +D +I ++G+D Sbjct: 294 ----KDGAIWFKTSELGTEKDEVIVRNNGLPTYFASDIAYHKNKFLKRNYDRVINLLGAD 349 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H G+V R++A A+ +++V+L +LVRLYR+G +MSKR G I+L +++EVG Sbjct: 350 HHGHVARMKAAVKAIDVDPDKLDVVLFQLVRLYRNGEIARMSKRTGKSISLTDLLEEVGR 409 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ RF+ + + +DFD +QS ENPV+YVQYA+AR S+ ++ +D + L Sbjct: 410 DAARFIFNTKASGSHIDFDLDLAVKQSNENPVYYVQYAHARICSMIKRLEDE----NVKL 465 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + E++L+ LAEYP I A EP +L Y+ D+A +FH ++ Sbjct: 466 QSVDSVDLTKLVAKEEIELMKKLAEYPEEIRIAAETLEPSRLTRYVLDVAGLFHSFYNAC 525 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A L R+ LV + +I + L+++ + +P +M Sbjct: 526 ------KVKDAEGDSLRNARVVLVDSTRVVIKNVLDLLSISAPEKM 565 >gi|83721308|ref|YP_440913.1| arginyl-tRNA synthetase [Burkholderia thailandensis E264] gi|167579622|ref|ZP_02372496.1| arginyl-tRNA synthetase [Burkholderia thailandensis TXDOH] gi|167617702|ref|ZP_02386333.1| arginyl-tRNA synthetase [Burkholderia thailandensis Bt4] gi|257140433|ref|ZP_05588695.1| arginyl-tRNA synthetase [Burkholderia thailandensis E264] gi|109894978|sp|Q2T1N6|SYR_BURTA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|83655133|gb|ABC39196.1| arginyl-tRNA synthetase [Burkholderia thailandensis E264] Length = 594 Score = 539 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 201/615 (32%), Positives = 315/615 (51%), Gaps = 65/615 (10%) Query: 7 FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 + L+N +K++ K + +L I +ERP+ AHG ++ N A+ L++PLG +P Sbjct: 9 LETLLENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQ 68 Query: 64 IAELIVARIKIDPDV----DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +AE IVA + P D+ IAG GFINL L+P+ + ++ ++ G +G + Sbjct: 69 LAERIVAALTAQPAAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVFAQGRAFGASEREH 128 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA+ Sbjct: 129 GKRVLLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAI 188 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233 S R + L D+ PE Y G Y+ + ++ A + + L + Sbjct: 189 STQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRDADDLEAI 247 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 + ++V + + DLKA ++ D + E + + +D L G YE Sbjct: 248 RKFAVAYLRREQDMDLKAFGVKFDQYYLESSLYT--EGRVEKTVDALIAAGMTYE----- 300 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353 L R+T GDD DR + K+DG+YTYF D+AY K+ERGF +I Sbjct: 301 -----------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVI 349 Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+R Sbjct: 350 NIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVR 409 Query: 412 HVVD---------EV------------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 +++ EV G D+VRF ++ RK FD +Q+ ENP Sbjct: 410 DLIEWSGGATPGSEVSPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+YVQYA+AR S+ + K + D L ++ P +S+ + L+ LAEYP V+ Sbjct: 470 VYYVQYAHARICSVLNEWKSRYGATDALLPGADLSPLDSK---QAMALMQKLAEYPDVLA 526 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A P+ +AFYL +LAS FH ++ R V + R+ L+ A ++ Sbjct: 527 HAANELAPHAVAFYLRELASEFHSFYNAER-------VLVDEEAPRTARIALLAATRQVL 579 Query: 571 NSGLNIIGVESPNEM 585 +GL ++GV +P++M Sbjct: 580 ENGLAMLGVSAPSKM 594 >gi|269794308|ref|YP_003313763.1| arginyl-tRNA synthetase [Sanguibacter keddieii DSM 10542] gi|269096493|gb|ACZ20929.1| arginyl-tRNA synthetase [Sanguibacter keddieii DSM 10542] Length = 559 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 194/588 (32%), Positives = 301/588 (51%), Gaps = 41/588 (6%) Query: 6 DFSSRLKNYLKEIDCKIKVE---KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + S L+ L + + ++I++ERPR HG +TN A+ L++ G P Sbjct: 5 ELSEALRAALAAKIADGTLALDLDALPEQILVERPRQREHGDWATNIALQLAKKAGTQPR 64 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +A+ + R P V SV +AG GF+N+ L + ++ +++ G YGR + G K Sbjct: 65 ALADDLAVRFAETPGVKSVAVAGPGFLNITLDAAAAGELARTVIDQGAGYGRGVAEAGKK 124 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VN+EFVSANPTGP+H+G R A VGD+LA ++ +G EVTREYY ND GAQI+ + S+ Sbjct: 125 VNLEFVSANPTGPIHIGGVRWAAVGDSLARVLEAAGAEVTREYYFNDHGAQIDRFSRSLL 184 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY----SSELLNFPEEKWLPIVKDYSV 238 R + D PE Y G Y++ + + + L P+E+ + + V Sbjct: 185 ARAK------GEDAPEDGYGGQYIQDIADAVLADVAAAGGPDPLTLPDEEAQEVFRSIGV 238 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 M I+ L + D++ ED H + + I L G+++E Sbjct: 239 DRMFTEIKAALHGFGVDFDVYFHEDTLH--ETGAVDRAIARLKDSGHMFEA--------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 R+T GDD DR ++KSDG Y A D+AY+ K ERG D +I ++G+ Sbjct: 288 -------DGATWLRTTDFGDDKDRVVIKSDGQAAYIAGDIAYYLDKRERGADEVIIMLGA 340 Query: 359 DHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 DH GYV R+ AV AA ++ + +L+ ++V L +DG P++MSKRAG +TL +VD V Sbjct: 341 DHHGYVGRMMAVCAAFGDQPGTNLQILIGQMVNLLKDGEPLRMSKRAGTVVTLEDLVDAV 400 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G D+ R+ ++ LD D + + + ENPV+YVQYA+AR ++ R A D + Sbjct: 401 GVDAARYSLVRSSTDSSLDIDLDLLSKATNENPVYYVQYAHARTANVARNAADHGVRRE- 459 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 D F +++ E+ E L+ L E+PRVI A +EP+++A YL LA +H ++ Sbjct: 460 DAFDPSLLTAET-----ESALLGSLTEFPRVIAQAAELREPHRVARYLEALAGAYHKWYA 514 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R P RL L A ++ +GL ++GV +P M Sbjct: 515 DVRVTP---VGDEEIGDTHRTRLWLNDATRQVLANGLALLGVSAPERM 559 >gi|241661767|ref|YP_002980127.1| arginyl-tRNA synthetase [Ralstonia pickettii 12D] gi|240863794|gb|ACS61455.1| arginyl-tRNA synthetase [Ralstonia pickettii 12D] Length = 596 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 195/620 (31%), Positives = 298/620 (48%), Gaps = 71/620 (11%) Query: 8 SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 + L + + E + IV+ERP+ AHG ++ N A+ L++PLG +P +A Sbjct: 6 KQTIAQLLSDAVGSLLPEGQARPEIVLERPKQAAHGDIACNVALQLAKPLGTNPRELAGK 65 Query: 68 IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 I I+ D V +V IAG GFINL LS + +++++ G YG G V Sbjct: 66 IADAIRADARGQRLVSAVEIAGPGFINLRLSAAARADVIAAVFAEGDRYGAANTHDGAPV 125 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EFVSANPTGP+HVGH R A +GD LASL+ + G++V RE+Y NDAG QI+ LA+SV Sbjct: 126 LVEFVSANPTGPLHVGHGRQAALGDALASLLDWQGHKVHREFYYNDAGVQIHNLAVSVQA 185 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPIVKDYS 237 R + D++ PE Y G Y+ + + + + + L ++ ++ Sbjct: 186 RAR-GYKPGDANWPEAAYNGDYIADIAADYLAGKTVRASDGEPVTGERDVENLEAIRRFA 244 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 V + DL+A ++ D + E + ++ +D L G YE Sbjct: 245 VTYLRNEQDIDLQAFGVKFDRYYLESSLYT--EGKVQQTVDALVAAGKTYE--------- 293 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 L R+T GDD DR + KSDG+YTYF D+AY K+ RGF +I V G Sbjct: 294 -------QEGALWLRTTDDGDDKDRVMRKSDGAYTYFVPDVAYHTTKWGRGFTQVINVQG 346 Query: 358 SDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 SDH G + R+ A + K + +L ++V + +DG +K+SKRAG ++T+R +++ Sbjct: 347 SDHHGTIARVRAGLQGLNIGIPKGYPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIE 406 Query: 416 E------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 G D+VRF +L RK FD +Q Sbjct: 407 WSNGDAESEAGVDTIRACVEAGEPNWPARFTRGRDAVRFFLLSRKADTEFVFDVDLALKQ 466 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 S ENPV+YVQYA+AR S+F +A L P + L+ LA + Sbjct: 467 SDENPVYYVQYAHARICSVFERAGVDPASLTNADLAAVTGP---DVSPQATALVQRLAAF 523 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 P ++ +A P+ +AFYL DLA FH ++ R V ++ + RL L+ A Sbjct: 524 PDMLADAARELAPHAVAFYLRDLAGDFHAFYNADR-------VLVDDEAVKRARLALLAA 576 Query: 566 VASIINSGLNIIGVESPNEM 585 ++ +GL +IGV +P +M Sbjct: 577 TRQVLRNGLTVIGVSAPQKM 596 >gi|206901295|ref|YP_002251195.1| arginyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12] gi|206740398|gb|ACI19456.1| arginyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12] Length = 550 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 198/583 (33%), Positives = 315/583 (54%), Gaps = 33/583 (5%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + +KN + + K ++ I+IE P+ +G +T A+ +++ P Sbjct: 1 MRKHIYELIKNAINVLKEKENFTTDEIE-IIIETPKQKEYGDYATAVALQIAQKNKKPPR 59 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +AE I+ ++ P + IAG GFIN +L+ L + L ++ ++ ++ K K Sbjct: 60 IVAEKILENLEKSPFIRKAEIAGPGFINFFLNDEALWETLR-LIRKDLDSFVSIPPKKKK 118 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 + +EF S NPTGPMH+ H R +GD+LA+L G+ V +E+YINDAG QI+ L S++ Sbjct: 119 IQLEFGSINPTGPMHIAHARGVTIGDSLANLFRRIGWNVEKEFYINDAGNQIDLLGESLY 178 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 RY Q L D +P+ Y G YL + KEL ++ ++ E + K+Y++ M+ Sbjct: 179 ARYMQLL-GYDHPVPDEGYHGNYLIELAKELLNQ-KDQIEKMNETEKKKFFKEYALSKML 236 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 + I+ L +++D++ SE H + +++++D L + GY YE Sbjct: 237 EDIKTTLLDFGVEYDVWFSERTLH--ENGKVKEVLDILVKNGYAYE-------------- 280 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 + F ST GD+ DR L+KSDG TYF AD+AY K +RGFD +I V G+DH Sbjct: 281 --KDGAIWFLSTKFGDEKDRVLVKSDGKPTYFLADIAYHLNKIQRGFDWIIDVWGADHHS 338 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 +V RL+ A+ K + ++L ++VRL + IKMSKR GDF+TL+ V +EVG D + Sbjct: 339 HVTRLKGAIQALGYPKDILEIILVQMVRLMKGNEEIKMSKRTGDFVTLKEVQEEVGKDPI 398 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 RF L R LDFD K+QS ENPV+YVQYA+ARC SI + A+ ++L Sbjct: 399 RFFFLLRSPESQLDFDIELAKKQSVENPVYYVQYAHARCCSILKNAEAKG----YNLADL 454 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 + + E LI++L YP +++ T E ++L FYL +L+++FHG++ + Sbjct: 455 DQANLSLLKEEKEKDLILNLLRYPEKLDDITRTLEIHQLPFYLLNLSTLFHGYYDSHK-- 512 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V +R LT+ RL L+ + II L+I+GV +P +M Sbjct: 513 -----VITEDRDLTLARLVLIDCIRIIIKDALSILGVSAPEKM 550 >gi|94986673|ref|YP_594606.1| arginyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00] gi|123082175|sp|Q1MRU1|SYR_LAWIP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|94730922|emb|CAJ54285.1| Arginyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00] Length = 550 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 208/564 (36%), Positives = 311/564 (55%), Gaps = 31/564 (5%) Query: 23 KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK-IDPDVDSV 81 K+ + VIE P++ HG L+TN A++L+ +G++P IAE I +++ SV Sbjct: 17 KLGYTWPKKAVIEIPQNTLHGDLATNIALVLANNIGINPKNIAEKIAEKLQQESTSFSSV 76 Query: 82 FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHC 141 +AG GF+N+ SP++ +K ++ I+ G YG +G KV IE+VSANPTGP+H+GH Sbjct: 77 SVAGPGFLNITFSPTFWQKTINHILSKGSSYGSCQLGNKQKVLIEYVSANPTGPLHIGHG 136 Query: 142 RCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYY 201 R A +GDTLA L+ F+GY VT EYYINDAG Q+ L LS++ R ++ L PE YY Sbjct: 137 RGAAIGDTLARLLRFTGYNVTTEYYINDAGRQMQLLGLSIWLRIKE-LSGIQVTWPEEYY 195 Query: 202 PGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 G Y+ + K L ++ + + + + ++ I+ DLK ++H+ + S Sbjct: 196 KGTYIIEIAKALLEEQPDIISYTDIDGEQASFH-FGMNVILNGIKQDLKTFKVEHEEWFS 254 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E + + I + L G +E L F+ST+ GDD D Sbjct: 255 ERTLIK--TNAIEQTLKALECTGLTFE----------------KEGALWFQSTVFGDDKD 296 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQI 381 R L KSD S TYFA D+AY KY RGFD +I ++G+DH GY+ R++A A Sbjct: 297 RVLRKSDKSLTYFALDIAYHYTKYNRGFDRIIDILGADHHGYIARIKAAMQAFGHDPMTF 356 Query: 382 NVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCK 441 +++L +LV L +G+ + MS RAG F L V++EVG D+ RFM L RK+ LDFD Sbjct: 357 DIILIQLVSLLENGIQVAMSTRAGQFEKLIDVINEVGVDAARFMFLLRKSDAHLDFDLEL 416 Query: 442 VKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVH 501 VK+++ NPV+YVQYAYAR SI R+A DL F + N +P + EL L+ Sbjct: 417 VKQRTMNNPVYYVQYAYARICSIIRKAH----DLGFTITDVNEVPLSNITTKDELNLLRL 472 Query: 502 LAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQ 561 L ++ VI NA P+ + YL +LA H +++ + +Q+N + + + RL Sbjct: 473 LDKFEDVIYNAAQHLAPHYITHYLMELAGELHSYYA------KYPVLQSNEKTIVLSRLA 526 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 L+ AV +I + LNI+GV +P M Sbjct: 527 LLQAVGQVIYNALNILGVTAPKNM 550 >gi|289666332|ref|ZP_06487913.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 562 Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 193/591 (32%), Positives = 309/591 (52%), Gaps = 37/591 (6%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 + A + + ++ + + L V+ERP+ HG +TNAAM+L++ +P Sbjct: 1 MKALLRALIGQGIEALRANGTLPADTLPPDCVVERPKTREHGDFATNAAMLLAKAARSNP 60 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +A+ ++A + DV V IAG GFIN +L+P+ ++ ++ ++ G +YGR L G G Sbjct: 61 RVLAQALLAALPASDDVAKVDIAGPGFINFHLAPTAYQREVAHVIKQGHDYGRGLAGNGR 120 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 V +E+VSANPTGP+HVGH R A +GD+LA ++ +G+ V RE+Y NDAG QI LALSV Sbjct: 121 SVGVEYVSANPTGPLHVGHGRAAAIGDSLARVLDANGWNVKREFYYNDAGVQIENLALSV 180 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDY 236 R Q L + + PE Y G Y+ V D + + L ++ + Sbjct: 181 QAR-AQGLTPDSAGWPENGYRGDYIADVANAYLAGDTVDLEGHLVTGTKDPADLESIRRF 239 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 +V + DL A + DI+ E ++ + + + L G+ YE Sbjct: 240 AVAYLRNEQNHDLAAFRVDFDIYFLESSLYK--DGKVEEAVQQLIASGHTYE-------- 289 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + L +ST GDD DR + KSDG+YTYF D+AY K++RG++ I + Sbjct: 290 --------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGYERAITEL 341 Query: 357 GSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414 G+DH G + R+ A A+ + +L ++V + R G +K+SKRAG ++TLR ++ Sbjct: 342 GADHHGSLTRVRAGLQAMELGIPQGWPEYVLHQMVTVMRGGEEVKLSKRAGSYVTLRDLI 401 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 +E +D+VR+ ++ RK L FD + QS +NPVFYVQYA+AR S+ RQA++ Sbjct: 402 EETSADAVRWFLIARKPDSQLTFDIDLARAQSNDNPVFYVQYAHARVCSVLRQAQEKGYK 461 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 D + D L +++ L+ YP V+E A A EPY++A YL +LA FH Sbjct: 462 YDQ---THGLAELAHLDDEHSLAVMLELSRYPEVVEIAGQALEPYQIAQYLRELAHAFHT 518 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + V ++ +L L A ++ +GL ++GV +P +M Sbjct: 519 WYHNSK-------VLVDDAAERDAKLTLAVATQQVLANGLELLGVSAPEKM 562 >gi|56416837|ref|YP_153911.1| arginyl-tRNA synthetase [Anaplasma marginale str. St. Maries] gi|255003182|ref|ZP_05278146.1| arginyl-tRNA synthetase [Anaplasma marginale str. Puerto Rico] gi|255004313|ref|ZP_05279114.1| arginyl-tRNA synthetase [Anaplasma marginale str. Virginia] gi|81359057|sp|Q5PAM4|SYR_ANAMM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|56388069|gb|AAV86656.1| arginyl-tRNA synthetase [Anaplasma marginale str. St. Maries] Length = 579 Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 237/584 (40%), Positives = 354/584 (60%), Gaps = 14/584 (2%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 LF +F + + E+ +V +L ++++ P + HG + TNAA+++ + +P Sbjct: 9 NLFGNFRCIVIQKIGEL-WGGEVTDSLLHKLIVAPPTEDRHGDVYTNAALVVGKFKRKNP 67 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 + IAE + + VDSV + GF+NL S + I +G +YG +G+G Sbjct: 68 MEIAEHLRQALAEVEGVDSVDVVPPGFVNLKCSNEVWYSAIRDINKAGKDYGAVNLGQGQ 127 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 KVN+EFVSANPTGP+H+GH R AV GD L++L+A+ GY+VTREYY+NDAG QINTL SV Sbjct: 128 KVNVEFVSANPTGPLHIGHARGAVFGDVLSNLLAWVGYDVTREYYVNDAGGQINTLVESV 187 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 + RY++AL + EG YPG YLK + K L +K+ +LL E ++++++++++ Sbjct: 188 YLRYKEAL-GEQVTIGEGLYPGEYLKPIAKALVEKHGDKLL--ASEDRTAVIREFALKSI 244 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 + +IR+D+ L ++HD+F E D R + ++ L ++G +Y G L P+ + Sbjct: 245 LDLIREDMALLGVKHDVFTYEADLQR--SRTVEKCVEFLQQKGMLYYGTLERPRGVEEEA 302 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 R+QLLFRST GDD DR L K DGS+TYFA D+AY K RGF +MI +G DH Sbjct: 303 AWQAREQLLFRSTDFGDDSDRALQKEDGSWTYFAGDIAYHFDKISRGFHDMILGLGFDHK 362 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 GYV RL+A A+S+ KA I+V L +V +G+P+KMSKR G+F+T R VV+EVG D Sbjct: 363 GYVSRLKAAVHALSDGKATIDVKLHNMVNFLENGVPVKMSKRRGEFLTARDVVEEVGKDV 422 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 RF+M+ RKN +LDFDF K KEQSK++ +FY+QYA+AR S+ R A + P D D Sbjct: 423 ARFIMMTRKNDVVLDFDFAKAKEQSKDSQIFYIQYAHARACSLMRNAPTLLPIEDVDFSR 482 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + P E+ LI L +P ++E++ + EP+++AFYL ++A FH W HG Sbjct: 483 VSSAP--------EIALIKLLVRWPNIVESSAVNHEPHRIAFYLLEVAEAFHVLWGHGSR 534 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +RF+ + T R+ LV VA +I+ GL+I + EM Sbjct: 535 SVDMRFIVEGDIATTSARIYLVKVVALVISLGLSIFSIAPMEEM 578 >gi|84622118|ref|YP_449490.1| arginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|109895054|sp|Q2P8B1|SYR_XANOM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|84366058|dbj|BAE67216.1| arginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 562 Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 191/591 (32%), Positives = 307/591 (51%), Gaps = 37/591 (6%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 + A + + ++ + + L V+ERP+ HG +TNAAM+L++ +P Sbjct: 1 MKALLRALIGQGIEALRANGTLPGDTLPPDFVVERPKTREHGDFATNAAMLLAKAARSNP 60 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +A+ ++ + DV V IAG GFIN +L+P+ ++ ++ ++ G +YGR L G G Sbjct: 61 RALAQALLTALPDSNDVTKVEIAGPGFINFHLAPTAYQREVAHVIKQGHDYGRGLAGNGR 120 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 V +E+VSANPTGP+HVGH R A +GD+LA ++ +G+ V RE+Y NDAG QI LALSV Sbjct: 121 SVGVEYVSANPTGPLHVGHGRAAAIGDSLARVLDANGWNVKREFYYNDAGVQIENLALSV 180 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDY 236 R Q L + + PE Y G Y+ V D + + L ++ + Sbjct: 181 QAR-AQGLTPDSAGWPENGYRGDYIADVANAYLAGDTVDMEGHLVTGTKDPADLESIRRF 239 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 +V + DL A + DI+ E ++ + + + L G+ YE Sbjct: 240 AVAYLRNEQNHDLAAFRVDFDIYFLESSLYK--DGKVEEAVQKLIASGHTYE-------- 289 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + L +ST GDD DR + KSDG+YTYF D+AY K++RG++ I + Sbjct: 290 --------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGYERAITEL 341 Query: 357 GSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414 G+DH G + R+ A A+ + +L ++V + RDG +K+ KRAG ++TLR ++ Sbjct: 342 GADHHGSLTRVRAGLQAMELGIPQGWPEYVLHQMVTVMRDGEEVKLGKRAGGYVTLRDLI 401 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 +E +D+VR+ ++ RK L FD + QS +NPVFYVQYA+AR S+ RQA++ Sbjct: 402 EETSADAVRWFLIARKPDSQLTFDIDLARAQSNDNPVFYVQYAHARVCSVLRQAQEKGYK 461 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 D + D L +++ L+ YP V+E A EPY++A YL +LA FH Sbjct: 462 YDQ---VHGLAELARLDDEHSLAVMLELSRYPEVVEIAGQTLEPYQIAQYLRELAHAFHT 518 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + V ++ +L L A ++ +GL ++GV +P +M Sbjct: 519 WYHNSK-------VLVDDAAERDAKLTLAVATQQVLANGLELLGVSAPEKM 562 >gi|294625197|ref|ZP_06703839.1| arginyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600516|gb|EFF44611.1| arginyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 569 Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 193/592 (32%), Positives = 309/592 (52%), Gaps = 37/592 (6%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 ++ A + + ++ + + L V+ERP+ HG +TNAAM+L++ + Sbjct: 7 HVKALLRALIGQGIEALRANGTLPADTLPPDFVVERPKTREHGDFATNAAMLLAKAARSN 66 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A+ ++A + DV V IAG GFIN +L+P+ ++ ++ ++ G +YGR L G G Sbjct: 67 PRALAQALLAALPASDDVAKVEIAGPGFINFHLAPTAYQREVAHVIKQGHDYGRGLAGNG 126 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 V +E+VSANPTGP+HVGH R A +GD+LA ++ +G+ V RE+Y NDAG QI LALS Sbjct: 127 RSVGVEYVSANPTGPLHVGHGRAAAIGDSLARVLDANGWNVKREFYYNDAGVQIENLALS 186 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKD 235 V R Q L + + PE Y G Y+ V D + + L ++ Sbjct: 187 VQAR-AQGLTPDSAGWPENGYRGDYIADVANAYLAGDTVDLEGHLVTGTKDPADLEAIRR 245 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 ++V + DL A + DI+ E ++ + + + L G+ YE Sbjct: 246 FAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK--DGKVEEAVQKLIASGHTYE------- 296 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 + L +ST GDD DR + KSDG+YTYF D+AY K++RG++ I Sbjct: 297 ---------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGYERAITE 347 Query: 356 MGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 +G+DH G + R+ A A+ + +L ++V + R G +K+SKRAG ++TLR + Sbjct: 348 LGADHHGSLTRVRAGLQAMELGIPQGWPEYVLHQMVTVMRGGEEVKLSKRAGSYVTLRDL 407 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 ++E +D+VR+ ++ RK L FD + QS +NPVFYVQYA+AR S+ RQA++ Sbjct: 408 IEETSADAVRWFLIARKPDSQLTFDIDLARAQSNDNPVFYVQYAHARVCSVLRQAQEKGY 467 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 D + D L +++ L+ YP V+E A A EPY++A YL +LA FH Sbjct: 468 KYDQ---AHGLAELACLDDEHSLAVMLELSRYPEVVEIAGQALEPYQIAQYLRELAHAFH 524 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + V + +L L A ++ +GL ++GV +P +M Sbjct: 525 TWYHNSK-------VLVDAAAERDAKLTLAVATQQVLANGLELLGVSAPEKM 569 >gi|326332896|ref|ZP_08199153.1| arginine--tRNA ligase [Nocardioidaceae bacterium Broad-1] gi|325949254|gb|EGD41337.1| arginine--tRNA ligase [Nocardioidaceae bacterium Broad-1] Length = 554 Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 187/583 (32%), Positives = 296/583 (50%), Gaps = 36/583 (6%) Query: 6 DFSSRLKNYLKEIDCKIKV--EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 S+ + + L + + + + + +ERPR HG +TN A+ L++ G +P Sbjct: 5 QLSTAVVDVLTALVDEGAITLPDGVPSTVTVERPRQKGHGDYATNVALQLAKKAGTNPRQ 64 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 + E I A++K V V IAG GF+N+ + K+ IV +G YG N KG + Sbjct: 65 LGEQIAAKLKESDGVADVEIAGPGFLNISVEAGAQGKLAGEIVAAGKAYGNNDSFKGHNI 124 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L ++ SG EVTREYY ND G QI+ A S+ Sbjct: 125 NLEFVSANPTGPLHLGGVRWAAVGDALGRVLEASGAEVTREYYFNDHGGQIDRFARSLLA 184 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 Q +PE Y G Y++ + K++ K + L ++ + + V+ M Sbjct: 185 WAQGK------PVPEDGYGGAYIEEIAKQVLAKEPNALEADDPQE---VFRAIGVELMFA 235 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L N+ D++ ED+ H+ + I+ L G VYE Sbjct: 236 EIKKSLHDFNVDFDVYFHEDNLHK--SGAVERAIEKLRELGNVYE--------------- 278 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 + + GDD DR ++K+DG+ YF+ DLAY+ K ERGFD ++G+DH GY Sbjct: 279 -KDGAIWLATEKFGDDKDRVVIKADGNGAYFSGDLAYYLDKRERGFDRCFIMLGADHHGY 337 Query: 364 VKRLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 V R+ A+ AA + + +L+ ++V L +DG P++MSKRAG +T+ +V+ +G D+ Sbjct: 338 VGRMMAMCAAFGDTPHENLEILIGQMVNLLKDGQPMRMSKRAGTVVTIDDIVEAIGVDAA 397 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 R+ + + +D D + NPV+YVQY +AR + A D+ +D D F Sbjct: 398 RYALARYSSDSNIDIDLDLWAKADSANPVYYVQYVHARTCRMMANAADLGMAIDLDTFDP 457 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 +++ E +L+ LAE PRV+ A +EP+++A YL D A +FH + + Sbjct: 458 SLLTHAREG-----ELLRALAELPRVVATAAELREPHRVARYLEDTAGIFHRWYDD-DDC 511 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L + + RL LV A ++ +GL ++GV +P M Sbjct: 512 RMLPKGDEPVAPVNLARLALVSAARTVFANGLGLLGVSAPERM 554 >gi|109895053|sp|Q3BNA3|SYR_XANC5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS Length = 562 Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 194/591 (32%), Positives = 308/591 (52%), Gaps = 37/591 (6%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 + A + + ++ + + L V+ERP+ HG +TNAAM+L++ +P Sbjct: 1 MKALLRALIGQGIEALRANGTLPADTLPPDFVVERPKTREHGDFATNAAMLLAKAARSNP 60 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +A+ +VA + DV V IAG GFIN +L+P+ ++ ++ ++ G +YGR L G G Sbjct: 61 RALAQALVAALPASDDVAKVDIAGPGFINFHLAPTAYQRQVAHVIKQGHDYGRGLAGNGR 120 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 V +E+VSANPTGP+HVGH R A +GD+LA ++ +G+ V RE+Y NDAG QI LALSV Sbjct: 121 SVGVEYVSANPTGPLHVGHGRAAAIGDSLARVLDANGWNVKREFYYNDAGVQIENLALSV 180 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDY 236 R Q L + PE Y G Y+ V D + + L ++ + Sbjct: 181 QAR-AQGLTPDSDGWPENGYRGDYIADVASAYLAGDTVDLEGHLVTGTKDPADLESIRRF 239 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 +V + DL A + DI+ E ++ + + + L G+ YE Sbjct: 240 AVAYLRNEQNHDLAAFRVDFDIYFLESSLYK--DGKVEEAVQKLIASGHTYE-------- 289 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + L +ST GDD DR + KSDG+YTYF D+AY K++RG++ I + Sbjct: 290 --------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGYERAITEL 341 Query: 357 GSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414 G+DH G + R+ A A+ + +L ++V + R G +K+SKRAG ++TLR ++ Sbjct: 342 GADHHGSLTRVRAGLQAMELGIPQGWPEYVLHQMVTVMRGGEEVKLSKRAGSYVTLRDLI 401 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 +E +D+VR+ ++ RK L FD + QS +NPVFYVQYA+AR S+ RQA++ Sbjct: 402 EETSADAVRWFLIARKPDSQLTFDIDLARAQSNDNPVFYVQYAHARVCSVLRQAQEKGYK 461 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 D + D L +++ L+ YP V+E A A EPY++A YL +LA FH Sbjct: 462 YDQ---AHGLAELACLDDEHSLAVMLELSRYPEVVEIAGQALEPYQIAQYLRELAHAFHT 518 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + V ++ +L L A ++ +GL ++GV +P +M Sbjct: 519 WYHNSK-------VLVDDAAERDAKLTLAVATQQVLANGLELLGVSAPEKM 562 >gi|222475202|ref|YP_002563618.1| arginyl-tRNA synthetase (argS) [Anaplasma marginale str. Florida] gi|222419339|gb|ACM49362.1| arginyl-tRNA synthetase (argS) [Anaplasma marginale str. Florida] Length = 593 Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats. Identities = 237/584 (40%), Positives = 354/584 (60%), Gaps = 14/584 (2%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 LF +F + + E+ +V +L ++++ P + HG + TNAA+++ + +P Sbjct: 23 NLFGNFRCIVIQKIGEL-WGGEVTDSLLHKLIVAPPTEDRHGDVYTNAALVVGKFKRKNP 81 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 + IAE + + VDSV + GF+NL S + I +G +YG +G+G Sbjct: 82 MEIAEHLRQALAEVEGVDSVDVVPPGFVNLKCSNEVWYSAIRDINKAGKDYGAVNLGQGQ 141 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 KVN+EFVSANPTGP+H+GH R AV GD L++L+A+ GY+VTREYY+NDAG QINTL SV Sbjct: 142 KVNVEFVSANPTGPLHIGHARGAVFGDVLSNLLAWVGYDVTREYYVNDAGGQINTLVESV 201 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 + RY++AL + EG YPG YLK + K L +K+ +LL E ++++++++++ Sbjct: 202 YLRYKEAL-GEQVTIGEGLYPGEYLKPIAKALVEKHGDKLL--ASEDRTAVIREFALKSI 258 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 + +IR+D+ L ++HD+F E D R + ++ L ++G +Y G L P+ + Sbjct: 259 LDLIREDMALLGVKHDVFTYEADLQR--SRTVEKCVEFLQQKGMLYYGTLERPRGVEEEA 316 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 R+QLLFRST GDD DR L K DGS+TYFA D+AY K RGF +MI +G DH Sbjct: 317 AWQAREQLLFRSTDFGDDSDRALQKEDGSWTYFAGDIAYHFDKISRGFHDMILGLGFDHK 376 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 GYV RL+A A+S+ KA I+V L +V +G+P+KMSKR G+F+T R VV+EVG D Sbjct: 377 GYVSRLKAAVHALSDGKATIDVKLHNMVNFLENGVPVKMSKRRGEFLTARDVVEEVGKDV 436 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 RF+M+ RKN +LDFDF K KEQSK++ +FY+QYA+AR S+ R A + P D D Sbjct: 437 ARFIMMTRKNDVVLDFDFAKAKEQSKDSQIFYIQYAHARACSLMRNAPTLLPIEDVDFSR 496 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + P E+ LI L +P ++E++ + EP+++AFYL ++A FH W HG Sbjct: 497 VSSAP--------EIALIKLLVRWPNIVESSAVNHEPHRIAFYLLEVAEAFHVLWGHGSR 548 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +RF+ + T R+ LV VA +I+ GL+I + EM Sbjct: 549 SVDMRFIVEGDIATTSARIYLVKVVALVISLGLSIFSIAPMEEM 592 >gi|170781869|ref|YP_001710201.1| arginyl-tRNA synthetase [Clavibacter michiganensis subsp. sepedonicus] gi|189083527|sp|B0RAP7|SYR_CLAMS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|169156437|emb|CAQ01585.1| arginyl-tRNA synthetase [Clavibacter michiganensis subsp. sepedonicus] Length = 554 Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats. Identities = 190/558 (34%), Positives = 292/558 (52%), Gaps = 35/558 (6%) Query: 29 LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGF 88 D +V+ERPR+ HG +TN AM +++PLG P TIA I + P V V +AG GF Sbjct: 31 PDMVVLERPRNRDHGDWATNIAMRIAKPLGESPRTIAADIAKALGELPQVAKVDVAGPGF 90 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 IN+ L + + +IV SG YGR +G ++N+EFVSANPTGP+H+G R A VGD Sbjct: 91 INITLEAAAAGALAHTIVESGPAYGRGHSLEGIRINLEFVSANPTGPIHLGGVRWAAVGD 150 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 +LA ++ G +VTREYY ND G+QI+ A S+ + + PE Y G Y+ Sbjct: 151 SLARILQAEGADVTREYYFNDHGSQIDRFARSLLASHL------GEETPEDGYGGAYIGE 204 Query: 209 VGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 + + + + Y ++ E + + + M I+ L + D+F ED H Sbjct: 205 IAERVVEGYEGDIDALTREAQQEVFRKSGTELMFGEIKQKLHDFGVDFDVFFHEDSLH-- 262 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 + + I L G+V+E + + R+T GDD DR +++S Sbjct: 263 ESGAVDRAIARLTELGHVFE----------------EDGAIWLRTTTFGDDRDRVVIRST 306 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA-QINVLLCE 387 G Y + DL Y+ K ERGF+ I ++G+DH GYV R+ A+ A + + +L+ + Sbjct: 307 GEPAYISGDLGYYLDKRERGFEQNIIMLGADHHGYVGRMMAMVEAFGDTPGVNLQILIGQ 366 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 +V L RDG P++MSKRAG +TL +VD VG D+ R+ ++ + LD D + +++ Sbjct: 367 MVNLLRDGEPVRMSKRAGTIVTLDDLVDAVGVDAGRYALVRSSADQNLDIDLAVLGKRTN 426 Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 +NPVFYVQYA+AR ++ R A D R+ E +E L+ L E+PR Sbjct: 427 DNPVFYVQYAHARTCAVDRNAAASGVD-------RSAFAPELLTHPTESALLGLLQEFPR 479 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 ++ A +EP+++A Y+ +LA +H + R PR L RL L AV Sbjct: 480 IVAQAAELREPHRVARYVEELAGSYHRWYDSCRVVPRG---DEEVTDLHRTRLWLNDAVR 536 Query: 568 SIINSGLNIIGVESPNEM 585 ++ +GLN++GV +P M Sbjct: 537 QVVANGLNLVGVSAPERM 554 >gi|186474957|ref|YP_001856427.1| arginyl-tRNA synthetase [Burkholderia phymatum STM815] gi|238691324|sp|B2JKJ2|SYR_BURP8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|184191416|gb|ACC69381.1| arginyl-tRNA synthetase [Burkholderia phymatum STM815] Length = 594 Score = 538 bits (1386), Expect = e-150, Method: Composition-based stats. Identities = 191/615 (31%), Positives = 312/615 (50%), Gaps = 65/615 (10%) Query: 7 FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 + L + +K++ + E + I I +ERP+ AHG ++ N AM L++P+ +P Sbjct: 9 LETLLTDVVKQVAQATQGESEAAFIAPAITLERPKVAAHGDVACNVAMQLAKPMRANPRQ 68 Query: 64 IAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +A+ IV + DP VD +AG GFINL LS + + +++++ +GR+ Sbjct: 69 LAQQIVDALLADPLAKGLVDGAEVAGPGFINLRLSAASKQAVIAAVFAQREAFGRSQREA 128 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +V +EFVSANPTGP+HVGH R A +GD +++++A G++V RE+Y NDAG QI LA+ Sbjct: 129 GKRVLVEFVSANPTGPLHVGHGRQAALGDAMSNVLASQGFDVHREFYYNDAGVQIGNLAI 188 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY------SSELLNFPEEKWLPIV 233 S R + L D PE Y G Y+ + ++ + + + + L + Sbjct: 189 STQARAR-GLKPGDPGWPEAAYNGEYIADIARDYLNGETVSASDGEPVKGAGDVEDLEAI 247 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 + ++V + DL+A ++ D + E ++ + ++ L G YE Sbjct: 248 RRFAVAYLRHEQDMDLQAFGVKFDQYYLESSLYK--EGRVEKTVNELIAAGKTYE----- 300 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353 L R+T GDD DR + KSDG+YTYF D+AY + K+ERGF +I Sbjct: 301 -----------QEGALWLRTTDDGDDKDRVMRKSDGTYTYFVPDVAYHETKWERGFTKVI 349 Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+R Sbjct: 350 NIQGSDHHGTIARVRAGLQGLGIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVR 409 Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 +++ G D+VRF ++ RK FD +Q+ ENP Sbjct: 410 DLIEWSGGAVPGQEAAPDLLDEETIRRGRDAVRFFLISRKADTEFVFDVDLALKQNDENP 469 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+YVQYA+AR S+ + K + + L ++ P +SE T L+ LAE+P ++ Sbjct: 470 VYYVQYAHARICSVINEWKSRYGADETGLPVVDLSPLDSERAT---ALLQKLAEFPDMLT 526 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A P+ +AFYL DLA FH ++ R V ++ R+ L+ A ++ Sbjct: 527 HAAGELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAQRNARIALLAATRQVL 579 Query: 571 NSGLNIIGVESPNEM 585 +GL +IGV +P +M Sbjct: 580 ANGLAVIGVSAPAKM 594 >gi|21244635|ref|NP_644217.1| arginyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306] gi|21110319|gb|AAM38753.1| arginyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str. 306] Length = 569 Score = 538 bits (1386), Expect = e-150, Method: Composition-based stats. Identities = 193/592 (32%), Positives = 308/592 (52%), Gaps = 37/592 (6%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 ++ A + + ++ + + L V+ERP+ HG +TNAAM+L++ + Sbjct: 7 HVKALLRALIGQGIEALRANGTLPADTLPPDFVVERPKTREHGDFATNAAMLLAKAARSN 66 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A+ ++A + DV V IAG GFIN +L+P+ ++ ++ ++ G +YGR L G G Sbjct: 67 PRALAQALLAALPASDDVAKVEIAGPGFINFHLAPTAYQREVAHVIKQGHDYGRGLAGNG 126 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 V +E+VSANPTGP+HVGH R A +GD+LA ++ +G+ V RE+Y NDAG QI LALS Sbjct: 127 RSVGVEYVSANPTGPLHVGHGRAAAIGDSLARVLDANGWNVKREFYYNDAGVQIENLALS 186 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKD 235 V R Q L + PE Y G Y+ V D + + L ++ Sbjct: 187 VQAR-AQGLTPDSDGWPENGYRGDYIADVANAYLAGDTVDLEGHLVTGTKDPADLESIRR 245 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 ++V + DL A + DI+ E ++ + + + L G+ YE Sbjct: 246 FAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK--DGKVEEAVQKLIASGHTYE------- 296 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 + L +ST GDD DR + KSDG+YTYF D+AY K++RG++ I Sbjct: 297 ---------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGYERAITE 347 Query: 356 MGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 +G+DH G + R+ A A+ + +L ++V + R G +K+SKRAG ++TLR + Sbjct: 348 LGADHHGSLTRVRAGLQAMELGIPQGWPEYVLHQMVTVMRGGEEVKLSKRAGSYVTLRDL 407 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 ++E +D+VR+ ++ RK L FD + QS +NPVFYVQYA+AR S+ RQA++ Sbjct: 408 IEETSADAVRWFLIARKPDSQLTFDIDLARAQSNDNPVFYVQYAHARVCSVLRQAQEKGY 467 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 D + D L +++ L+ YP V+E A A EPY++A YL +LA FH Sbjct: 468 KYDQ---AHGLAELACLDDEHSLAVMLELSRYPEVVEIAGQALEPYQIAQYLRELAHAFH 524 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + V + +L L A ++ +GL ++GV +P +M Sbjct: 525 TWYHNSK-------VLVDAAAERDAKLTLAVATQQVLANGLELLGVSAPEKM 569 >gi|187927245|ref|YP_001897732.1| arginyl-tRNA synthetase [Ralstonia pickettii 12J] gi|309780055|ref|ZP_07674808.1| arginine--tRNA ligase [Ralstonia sp. 5_7_47FAA] gi|238691829|sp|B2UDW0|SYR_RALPJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|187724135|gb|ACD25300.1| arginyl-tRNA synthetase [Ralstonia pickettii 12J] gi|308921225|gb|EFP66869.1| arginine--tRNA ligase [Ralstonia sp. 5_7_47FAA] Length = 596 Score = 538 bits (1386), Expect = e-150, Method: Composition-based stats. Identities = 194/620 (31%), Positives = 298/620 (48%), Gaps = 71/620 (11%) Query: 8 SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 + L + + E + IV+ERP+ AHG ++ N A+ L++PLG +P +A Sbjct: 6 KQTIAQLLSDAVGSLLPEGQARPEIVLERPKQAAHGDIACNVALQLAKPLGTNPRELAGK 65 Query: 68 IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 I I+ D V +V IAG GFINL LS + +++++ G YG G V Sbjct: 66 IADAIRADARGQRLVAAVEIAGPGFINLRLSAAARADVIAAVFAEGDRYGAANTHDGAPV 125 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EFVSANPTGP+HVGH R A +GD LASL+ + G++V RE+Y NDAG QI+ LA+SV Sbjct: 126 LVEFVSANPTGPLHVGHGRQAALGDALASLLDWQGHKVHREFYYNDAGVQIHNLAVSVQA 185 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPIVKDYS 237 R + D++ PE Y G Y+ + + + + + + ++ ++ Sbjct: 186 RAR-GYKPGDANWPEAAYNGDYIADIAADYLAGKTVRASDGEPVTGERDVENIEAIRRFA 244 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 V + DL+A ++ D + E + ++ +D L G YE Sbjct: 245 VTYLRNEQDIDLQAFGVKFDRYYLESSLYT--EGKVQQTVDALVAAGKTYE--------- 293 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 L R+T GDD DR + KSDG+YTYF D+AY K+ RGF +I V G Sbjct: 294 -------QEGALWLRTTDDGDDKDRVMRKSDGAYTYFVPDVAYHTTKWGRGFTQVINVQG 346 Query: 358 SDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 SDH G + R+ A + K + +L ++V + +DG +K+SKRAG ++T+R +++ Sbjct: 347 SDHHGTIARVRAGLQGLNIGIPKGYPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIE 406 Query: 416 E------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 G D+VRF +L RK FD +Q Sbjct: 407 WSNGDAESEAGVDTIRACVEAGEPNWPARFTRGRDAVRFFLLSRKADTEFVFDVDLALKQ 466 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 S ENPV+YVQYA+AR S+F +A L P + L+ LA + Sbjct: 467 SDENPVYYVQYAHARICSVFERAGVDAASLTSADLAAVTGP---DVSPQATALVQRLAAF 523 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 P ++ +A P+ +AFYL DLA FH ++ R V ++ + RL L+ A Sbjct: 524 PDMLADAARELAPHAVAFYLRDLAGDFHAFYNADR-------VLVDDEAVKRARLALLAA 576 Query: 566 VASIINSGLNIIGVESPNEM 585 ++ +GL +IGV +P +M Sbjct: 577 TRQVLRNGLAVIGVSAPQKM 596 >gi|330818465|ref|YP_004362170.1| Arginyl-tRNA synthetase [Burkholderia gladioli BSR3] gi|327370858|gb|AEA62214.1| Arginyl-tRNA synthetase [Burkholderia gladioli BSR3] Length = 594 Score = 538 bits (1386), Expect = e-150, Method: Composition-based stats. Identities = 198/615 (32%), Positives = 315/615 (51%), Gaps = 65/615 (10%) Query: 7 FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 + L + +K++ +K E + + I +ERP+ AHG ++ N AM L++PLG +P Sbjct: 9 LETLLADSVKQVVQALKGESEAGFVAPTITLERPKAAAHGDVACNVAMQLAKPLGTNPRQ 68 Query: 64 IAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +AE IVA + P V++ IAG GFINL L+ + + ++ ++ +GR+ Sbjct: 69 LAEKIVAAVTAHPSAAGLVEAAEIAGPGFINLRLTAAAKQAVIGAVFAEREAFGRSAHEA 128 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LAL Sbjct: 129 GRRVLLEFVSANPTGPLHVGHGRQAALGDVLANVLASQGYAVHREFYYNDAGVQIGNLAL 188 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY------SSELLNFPEEKWLPIV 233 S R + L D+D PE Y G Y+ + ++ + + + + + Sbjct: 189 STQARAR-GLKPGDADWPEAAYNGEYIADIARDYLAGATVSASDGEPVTGKGDIEDIEAI 247 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 + ++V + + DLKA ++ D + E ++ + + L G YE Sbjct: 248 RKFAVAYLRREQDIDLKAFGVRFDQYYLESSLYQ--EGRVESTVQALVDAGMTYE----- 300 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353 L R+T GDD DR + K+DG+YTYF D+AY K++RGF +I Sbjct: 301 -----------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVAKWQRGFTKVI 349 Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+R Sbjct: 350 NIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKLSKRAGSYVTVR 409 Query: 412 HVVD---------EV------------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 +++ EV G D+VRF ++ RK FD +Q+ ENP Sbjct: 410 DLIEWSGGATPDAEVSPEQLDEAIITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+YVQYA+AR S+ + K + L ++ P +S+ S L+ LAEYP ++ Sbjct: 470 VYYVQYAHARICSVLNEWKSRHGADEAILPGADLSPLDSKPAAS---LLQKLAEYPEMLT 526 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A P+ +AFYL DLA FH ++ R V ++ R+ L+ A ++ Sbjct: 527 HAAGELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAQRTARIALLAATRQVL 579 Query: 571 NSGLNIIGVESPNEM 585 +GL ++GV SP++M Sbjct: 580 ANGLAVLGVSSPSKM 594 >gi|325928298|ref|ZP_08189500.1| arginyl-tRNA synthetase [Xanthomonas perforans 91-118] gi|325541335|gb|EGD12875.1| arginyl-tRNA synthetase [Xanthomonas perforans 91-118] Length = 562 Score = 537 bits (1385), Expect = e-150, Method: Composition-based stats. Identities = 194/591 (32%), Positives = 308/591 (52%), Gaps = 37/591 (6%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 + A + + ++ + + L V+ERP+ HG +TNAAM+L++ +P Sbjct: 1 MKALLRALIGQGIEALRANGTLPADTLPPDFVVERPKTREHGDFATNAAMLLAKAARSNP 60 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +A+ +VA + DV V IAG GFIN +L+P+ ++ ++ ++ G +YGR L G G Sbjct: 61 RALAQALVAALPASDDVAKVDIAGPGFINFHLAPTAYQREVAHVIKQGHDYGRGLAGNGR 120 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 V +E+VSANPTGP+HVGH R A +GD+LA ++ +G+ V RE+Y NDAG QI LALSV Sbjct: 121 SVGVEYVSANPTGPLHVGHGRAAAIGDSLARVLDANGWNVKREFYYNDAGVQIENLALSV 180 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDY 236 R Q L + PE Y G Y+ V D + + L ++ + Sbjct: 181 QAR-AQGLTPDSDGWPENGYRGDYIADVASAYLAGDTVDLEGHLVTGTKDPADLESIRRF 239 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 +V + DL A + DI+ E ++ + + + L G+ YE Sbjct: 240 AVAYLRNEQNHDLAAFRVDFDIYFLESSLYK--DGKVEEAVQKLIASGHTYE-------- 289 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + L +ST GDD DR + KSDG+YTYF D+AY K++RG++ I + Sbjct: 290 --------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGYERAITEL 341 Query: 357 GSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414 G+DH G + R+ A A+ + +L ++V + R G +K+SKRAG ++TLR ++ Sbjct: 342 GADHHGSLTRVRAGLQAMELGIPQGWPEYVLHQMVTVMRGGEEVKLSKRAGSYVTLRDLI 401 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 +E +D+VR+ ++ RK L FD + QS +NPVFYVQYA+AR S+ RQA++ Sbjct: 402 EETSADAVRWFLIARKPDSQLTFDIDLARAQSNDNPVFYVQYAHARVCSVLRQAQEKGYK 461 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 D + D L +++ L+ YP V+E A A EPY++A YL +LA FH Sbjct: 462 YDQ---AHGLAELACLDDEHSLAVMLELSRYPEVVEIAGQALEPYQIAQYLRELAHAFHT 518 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + V ++ +L L A ++ +GL ++GV +P +M Sbjct: 519 WYHNSK-------VLVDDAAERDAKLTLAVATQQVLANGLELLGVSAPEKM 562 >gi|269958746|ref|YP_003328533.1| arginyl-tRNA synthetase [Anaplasma centrale str. Israel] gi|269848575|gb|ACZ49219.1| arginyl-tRNA synthetase [Anaplasma centrale str. Israel] Length = 593 Score = 537 bits (1384), Expect = e-150, Method: Composition-based stats. Identities = 237/584 (40%), Positives = 354/584 (60%), Gaps = 14/584 (2%) Query: 2 YLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 LF +F + + E+ +V +L ++++ P + HG + TNAA+++ + +P Sbjct: 23 NLFGNFRCIVIQKIGEL-WGSEVTDSLLHKLIVAPPTEDRHGDVYTNAALVVGKFKRKNP 81 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 + IAE + + VDSV + GF+NL S + I +G +YG +G+G Sbjct: 82 MEIAEHLRQALAEVEGVDSVDVVPPGFVNLKCSNEVWYSAIRDINKAGKDYGAVNLGQGQ 141 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 KVN+EFVSANPTGP+H+GH R AV GD L++L+A+ GY+VTREYY+NDAG QINTL SV Sbjct: 142 KVNVEFVSANPTGPLHIGHARGAVFGDVLSNLLAWVGYDVTREYYVNDAGGQINTLVESV 201 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 + RY++AL + EG YPG YLK + K L +K+ +LL E ++++++++++ Sbjct: 202 YLRYKEAL-GEQVTIGEGLYPGEYLKPIAKALVEKHGDKLL--ASEDRTAVIREFALKSI 258 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 + +IR+D+ L ++HD+F E D R + ++ L ++G +Y G L P+ + Sbjct: 259 LDLIREDMALLGVKHDVFTYEADLQR--SRTVEKCVEFLQQKGMLYYGTLERPRGVEEEA 316 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 R+QLLFRST GDD DR L K DGS+TYFA D+AY K RGF +MI +G DH Sbjct: 317 AWQAREQLLFRSTDFGDDSDRALQKEDGSWTYFAGDIAYHFDKISRGFHDMILGLGFDHK 376 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 GYV RL+A A+S+ KA I+V L +V +G+P+KMSKR G+F+T R VV+EVG D Sbjct: 377 GYVSRLKAAVHALSDGKATIDVKLHNMVNFLENGVPVKMSKRRGEFLTARDVVEEVGKDV 436 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 RF+M+ RKN +LDFDF K KEQSK++ +FY+QYA+AR S+ R A + P D D Sbjct: 437 ARFIMMTRKNDVVLDFDFAKAKEQSKDSQIFYIQYAHARACSLMRNAPTLLPIEDVDFSR 496 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + P E+ LI L +P ++E++ + EP+++AFYL ++A FH W HG Sbjct: 497 VSSAP--------EIALIKLLVRWPNIVESSAVNHEPHRIAFYLLEVAEAFHVLWGHGSR 548 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +RF+ + T R+ LV VA +I+ GL+I + EM Sbjct: 549 SVDMRFIVEGDIATTSARIYLVKVVALVISLGLSIFSIAPMEEM 592 >gi|166713832|ref|ZP_02245039.1| arginyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 562 Score = 537 bits (1384), Expect = e-150, Method: Composition-based stats. Identities = 191/591 (32%), Positives = 307/591 (51%), Gaps = 37/591 (6%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 + A + + ++ + + L V+ERP+ HG +TNAAM+L++ +P Sbjct: 1 MKALLRALIGQGIEALRANGTLPGDTLPPDFVVERPKTREHGDFATNAAMLLAKAARSNP 60 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +A+ ++ + DV V IAG GFIN +L+P+ ++ ++ ++ G +YGR L G G Sbjct: 61 RALAQALLTALPASNDVTKVEIAGPGFINFHLAPTAYQREVAHVIKQGHDYGRGLAGNGR 120 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 V +E+VSANPTGP+HVGH R A +GD+LA ++ +G+ V RE+Y NDAG QI LALSV Sbjct: 121 SVGVEYVSANPTGPLHVGHGRAAAIGDSLARVLDANGWNVKREFYYNDAGVQIENLALSV 180 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDY 236 R Q L + + PE Y G Y+ V D + + L ++ + Sbjct: 181 QAR-AQGLTPDSAGWPENGYRGDYIADVANAYLAGDTVDLEGHLVTGTKDPADLESIRRF 239 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 +V + DL A + DI+ E ++ + + + L G+ YE Sbjct: 240 AVAYLRNEQNHDLAAFRVDFDIYFLESSLYK--DGKVEEAVQKLIASGHTYE-------- 289 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + L +ST GDD DR + KSDG+YTYF D+AY K++RG++ I + Sbjct: 290 --------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGYERAITEL 341 Query: 357 GSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414 G+DH G + R+ A A+ + +L ++V + RDG +K+ KRAG ++TLR ++ Sbjct: 342 GADHHGSLTRVRAGLQAMELGIPQGWPEYVLHQMVTVMRDGEEVKLGKRAGSYVTLRDLI 401 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 +E +D+VR+ ++ RK L FD + QS +NPVFYVQYA+AR S+ RQA++ Sbjct: 402 EETSADAVRWFLIARKPDSQLTFDIDLARAQSNDNPVFYVQYAHARVCSVLRQAQEKGYK 461 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 D + D L +++ L+ YP V+E A EPY++A YL +LA FH Sbjct: 462 YDQ---VHGLAELARLDDEHSLAVMLELSRYPEVVEIAGQTLEPYQIAQYLRELAHAFHT 518 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + V ++ +L L A ++ +GL ++GV +P +M Sbjct: 519 WYHNSK-------VLVDDAAERDAKLTLAVATQQVLANGLELLGVSAPEKM 562 >gi|325919705|ref|ZP_08181707.1| arginyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865] gi|325549813|gb|EGD20665.1| arginyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865] Length = 562 Score = 537 bits (1384), Expect = e-150, Method: Composition-based stats. Identities = 191/591 (32%), Positives = 307/591 (51%), Gaps = 37/591 (6%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 + A + + ++ + + L V+ERP+ HG +TNAAM+L++P +P Sbjct: 1 MKAQLRALIGQGIEALRANGTLPADTLPPDFVVERPKTREHGDFATNAAMLLAKPARSNP 60 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +A+ +VA + +V V IAG GFIN +L+PS ++ ++ ++ G +YGR L G G Sbjct: 61 RALAQALVAALPASDEVAKVEIAGPGFINFHLTPSAYQREVAHVIKQGPDYGRGLAGNGR 120 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 V +E+VSANPTGP+HVGH R A +GD+LA ++ +G+ V RE+Y NDAG QI LALSV Sbjct: 121 SVGVEYVSANPTGPLHVGHGRAAAIGDSLARVLDANGWNVKREFYYNDAGVQIENLALSV 180 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDY 236 R Q L + PE Y G Y+ V D + + + ++ + Sbjct: 181 QAR-AQGLTPDSDGWPENGYRGDYIADVANAYLAGDTVDLEGHLVTGTQDPADIESIRRF 239 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 +V + DL A + DI+ E ++ + + + L G+ YE Sbjct: 240 AVAYLRNEQNHDLAAFRVDFDIYFLESSLYK--DGKVEEAVQKLIASGHTYE-------- 289 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + L +ST GDD DR + KSDG+YTYF D+AY K++RG++ I + Sbjct: 290 --------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGYERAITEL 341 Query: 357 GSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414 G+DH G + R+ A A + + +L ++V + R G +K+SKRAG ++TLR ++ Sbjct: 342 GADHHGSLTRVRAGLQALELGIPQGWPEYVLHQMVTVMRGGEEVKLSKRAGSYVTLRDLI 401 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 +E +D+VR+ ++ RK L FD ++QS +NPVFYVQYA+AR S+ RQA + Sbjct: 402 EETSADAVRWFLIARKPDSQLTFDIDLARQQSNDNPVFYVQYAHARVCSVLRQALEKGYK 461 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 + + D L ++V L+ Y V+E A EPY++A YL +LA FH Sbjct: 462 YEQ---AHGLAELARLDDEHSLNVMVELSRYAEVVEVAGQTLEPYQIAQYLRELAHAFHT 518 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + + ++ +L L A ++ +GL ++GV +P +M Sbjct: 519 WYHNTK-------LLVDDAAERDAKLTLAVATQQVLANGLELLGVSAPEKM 562 >gi|317123140|ref|YP_004103143.1| arginyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885] gi|315593120|gb|ADU52416.1| arginyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885] Length = 566 Score = 537 bits (1384), Expect = e-150, Method: Composition-based stats. Identities = 188/569 (33%), Positives = 294/569 (51%), Gaps = 31/569 (5%) Query: 17 EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP 76 E+ + + + +E PRD HG ++NAA++L+ G P +A + + Sbjct: 29 ELPAEADPANESWRGVQVEVPRDPRHGDFASNAALVLAGRAGRPPREVAAVFQRHLPGGA 88 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 + V +AG GF+N YL+ ++ ++ + +I+ +G +G G G KV +EFVSANPTGP+ Sbjct: 89 WLRQVEVAGPGFLNFYLADAWWKEGVRAILQAGDAFGATDAGAGRKVQVEFVSANPTGPL 148 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 V + R A +GD LA ++ +GY V +E+Y+NDAG QI LA SV R +Q L ++++ Sbjct: 149 GVVNARAAALGDALARVLEAAGYRVEKEFYLNDAGNQIRKLAQSVEARMRQEL-GQEAEI 207 Query: 197 PEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 PEG YPG YL + ++L LL+ PEE+ + ++V++++ +R L ++ Sbjct: 208 PEGGYPGAYLIDIARDLLAAEGPGLLDRPEEQRWERMARFAVESLVAQMRTQLARFGVEF 267 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D++ E +++ L ++ VYE + RS+ V Sbjct: 268 DVWYPESRVRA--EGYPERVLERLRQRDMVYEH----------------DGAVWLRSSAV 309 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GDD DR L++ DG YTY D+AY K+ERGF I + G DH G+V +EA A+ Sbjct: 310 GDDKDRVLVRRDGEYTYTLVDIAYHLTKWERGFQQAIDIWGQDHHGHVVPMEAALRALGL 369 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 VLL ++V L R G ++MSKR G+ +T+ +DEV D+ R+ L R LD Sbjct: 370 PDGWFEVLLTQMVHLVRGGQAVRMSKRRGELVTMAEFLDEVDVDAARYFFLMRSPDTHLD 429 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+YVQYA+AR I RQA + + L P D +E Sbjct: 430 FDLDLANLRSNENPVYYVQYAHARACGILRQA-----EAEAGLRPDPAADLSPLGDPAER 484 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 L L + P + A A+EP++L +YL D+A++FH ++ R V + Sbjct: 485 DLARRLLDLPGEVAAAAAAREPHRLTYYLKDVATLFHQFYTRCR-------VLGEEEPVA 537 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL LV A ++ L ++GV +P M Sbjct: 538 RARLALVDATRRVLARTLGLLGVTAPERM 566 >gi|145596165|ref|YP_001160462.1| arginyl-tRNA synthetase [Salinispora tropica CNB-440] gi|145305502|gb|ABP56084.1| arginyl-tRNA synthetase [Salinispora tropica CNB-440] Length = 554 Score = 537 bits (1384), Expect = e-150, Method: Composition-based stats. Identities = 183/583 (31%), Positives = 301/583 (51%), Gaps = 34/583 (5%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 A+ + + + + +++ L ++ +ERPR+ HG ++ A+ LS+ +G+ P Sbjct: 4 AELAEVVLTAAHAVFTERGLDRSTLPEQTAVERPRNVEHGDYASTLALQLSKKVGVPPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + ++ V SV IAG GF+N+ L + ++ IV +G EYGR+ G + Sbjct: 64 LAAALAEQLGQAVGVKSVEIAGPGFLNIRLDAAAAGQLAQVIVETGAEYGRSGRLAGQSI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L+ L+ +G V EYY NDAG+QI+ A S+ Sbjct: 124 NLEFVSANPTGPVHIGGVRWAAVGDALSRLLRATGAAVATEYYFNDAGSQIDRFARSLLA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G YL + +++ + ++L + + + V+ M Sbjct: 184 AAK------GEPPPEDGYAGAYLAEIAQQVQSR-RPDVLALDDAAAQEVFRVEGVELMFA 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L+ ++ D + +E D H + + ++ L +QG+++E Sbjct: 237 EIKSSLRDFGVEFDTYFNEKDLH--NRGELELALERLRQQGHIFEA-------------- 280 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 R+T GDD DR L KSDG +TYFAAD AY+ K ERGF+ ++ ++G+DH GY Sbjct: 281 --DGATWLRTTDFGDDKDRVLRKSDGEWTYFAADCAYYLDKRERGFERVVLMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 + R++A+ A + + + +L+ ++V L RDG P++MSKRAG ++L +VD +G D+ Sbjct: 339 LGRMKAMVACFGDDPGRNLEILIGQMVNLVRDGAPVRMSKRAGTVVSLEDLVDAIGVDAA 398 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 R+ + +D D +++NPV+YVQY AR S+ R A ++ Sbjct: 399 RYALARYSTDSPIDIDIELWTRATRDNPVYYVQYVAARTASVGRNAAEVGLARGGS---- 454 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 E E +L+ LAE+P V+ A +EP+++A YL DLA +H + + R Sbjct: 455 ADFHPELLDHDKENELLKALAEFPAVVATAAELREPHRIARYLEDLAGAYHRFYDNCRVL 514 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 PR L RL L A +I +GL ++GV +P M Sbjct: 515 PRG---DEEITDLHRARLWLNDATRVVIANGLRLLGVAAPERM 554 >gi|317152002|ref|YP_004120050.1| arginyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2] gi|316942253|gb|ADU61304.1| arginyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2] Length = 547 Score = 537 bits (1384), Expect = e-150, Method: Composition-based stats. Identities = 210/579 (36%), Positives = 322/579 (55%), Gaps = 36/579 (6%) Query: 8 SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 L+ L+++ E D+ VIE P+D G +S N AM+L++ G P IAE Sbjct: 4 KIHLETALRKVLADRGWE--WPDKGVIEPPKDRQFGDMSVNVAMMLAKQAGKPPRAIAEE 61 Query: 68 IVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127 I A + DP + V IAG GF+N +P + + + + +G YG + +GKG +V +E+ Sbjct: 62 IAAAMADDPRIARVDIAGPGFLNFTFAPGFWHETIGVVREAGQGYGASDLGKGVRVQVEY 121 Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187 VSANPTGP+H+GH R A +GD+L +M +GYEV EYY+NDAG Q+ L S+++R + Sbjct: 122 VSANPTGPLHIGHGRGAALGDSLVRIMEKAGYEVEAEYYVNDAGRQMRILGSSIWYR-LK 180 Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247 AL D PE YY G Y+ + +++ + +L+ E+ + I +D + ++ IR+ Sbjct: 181 ALSGRDVAEPEDYYRGDYIIGIARDVLA-ANPGILDMDEKDAVEICQDRGMNDILDGIRE 239 Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307 DL+A ++HD++ SE + + +L G +E Sbjct: 240 DLRAFGVRHDVWFSEKSLVA--DGLVDETFADLRESGLGFE----------------QDG 281 Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367 FRST GDD DR L KS G TYFA+D+AY K++RGFD ++ + G+DH GYV R+ Sbjct: 282 AFWFRSTQFGDDKDRVLRKSSGDTTYFASDIAYHDHKFKRGFDLVVDIWGADHHGYVPRM 341 Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 A A+ KK ++V+L LV L RDG P+ MS RAG+F TL+ VVDEVG+D+ RFM L Sbjct: 342 MAACEALG-KKGGLHVILVNLVNLLRDGEPVAMSTRAGEFETLKDVVDEVGADAARFMFL 400 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPRNVIP 486 RK+ LDFD VK+++ +NPVFYVQYA+AR S+ +A + D ++ Sbjct: 401 SRKSDSRLDFDLELVKQKTMDNPVFYVQYAHARICSLNAKAAEAGVAPAGPDKAALALLD 460 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 E + D ++ L +YP +E+A Q P+ ++ YL +LAS H ++++ Sbjct: 461 TEYDLD-----VLRLLDQYPDYVESAARTQSPHLISTYLQELASTLHRYYTNCH------ 509 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V + + + RL L+ VA ++ GL ++GV +P M Sbjct: 510 -VLSADPAVASARLMLLGCVAGVVRDGLGLLGVSAPESM 547 >gi|291279741|ref|YP_003496576.1| arginyl-tRNA synthetase [Deferribacter desulfuricans SSM1] gi|290754443|dbj|BAI80820.1| arginyl-tRNA synthetase [Deferribacter desulfuricans SSM1] Length = 543 Score = 537 bits (1384), Expect = e-150, Method: Composition-based stats. Identities = 202/579 (34%), Positives = 315/579 (54%), Gaps = 36/579 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 +R+K ++ K+ V + +IE P+D +G +TN AM L++ +P IA Sbjct: 1 MENRIKELIENALDKLGVNN--FNDFIIEIPKDSKNGDFATNVAMKLAKVFKKNPRDIAS 58 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 +V I+ D +D + IAG GFIN +++ Y I+ ++ Y G+ +V +E Sbjct: 59 DLVTNIEKDNFIDKIEIAGPGFINFFINKKYFESIIEQVLKD-ENYFVLDFGENKRVLVE 117 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+H+GH R A GDTLA L+ +G++V +EYYINDAG Q+ L S+ RY+ Sbjct: 118 FVSANPTGPLHIGHGRGAAYGDTLARLLRVAGFQVEKEYYINDAGNQMKMLGDSIVTRYK 177 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 Q + ++ + Y G Y+ + K++ ++Y LL+ PE K I + +MK I Sbjct: 178 QLVNGKIEEM-QDGYRGEYIIDIAKKIYEEYGDSLLDDPE-KCFNICFKTGLDEIMKSIV 235 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 DDL + D + SE + + + L GY+YE Sbjct: 236 DDLDDFRVSFDRWFSEKSLF--EKGVVDKALSILDENGYLYE----------------KD 277 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366 + F+ST GD+ DR + K+DGSYTYFA+D+AY K ERG+D + V G+DH GY+ R Sbjct: 278 GAVWFKSTSFGDEKDRVVKKADGSYTYFASDIAYHLNKIERGYDLFVNVWGADHHGYMNR 337 Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 + A+ + ++L ++V L + G I MS RAG+FITLR ++DEVG+D+ RF Sbjct: 338 MFGALKALGAPDDILKIVLIQMVNLVKGGERISMSTRAGEFITLRWLIDEVGADAARFFY 397 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 L R ++ DFD K +S +NPV+YVQYA+AR S+F A + + R Sbjct: 398 LMRDHNAQFDFDIDLAKSKSSDNPVYYVQYAHARVNSLFENAIEKGVEF------RLAEN 451 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 + E ++I + E +VI+ A EP+++++YL +LAS+FH ++ + + Sbjct: 452 LDKLTLDQEKEIIKKIDELKKVIKAAATHLEPHRISYYLQELASLFHNYYYNFK------ 505 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +++ +LT RL L AVA I GL I+GVE+P +M Sbjct: 506 -IISDDYELTNARLNLAKAVAKTIKFGLEILGVEAPEKM 543 >gi|326203285|ref|ZP_08193150.1| arginyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782] gi|325986543|gb|EGD47374.1| arginyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782] Length = 564 Score = 537 bits (1384), Expect = e-150, Method: Composition-based stats. Identities = 194/586 (33%), Positives = 305/586 (52%), Gaps = 32/586 (5%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + N + + ++ + I IE PR+ HG STN AM +++ P Sbjct: 8 IRQQIKDAVINSINKSVETGELPSLEITDITIEIPREKGHGDFSTNVAMQITKTAKKAPR 67 Query: 63 TIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 IA+ I+ I D V AG GFIN L SYL + +S I YGR IG G Sbjct: 68 QIADTIIKNIITDGTYIKKVDCAGPGFINFTLDNSYLYETISIIEQEKENYGRIDIGNGK 127 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 KV +EFVSANPTGP+H+G+ R +GD +AS++ +GY VTRE+ INDAG QI S+ Sbjct: 128 KVMVEFVSANPTGPLHMGNARGGALGDCIASVLDAAGYNVTREFLINDAGNQIEKFGTSL 187 Query: 182 FWRYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 RY Q + D+ + PE Y G + ++ + + +N E+ I D+++ Sbjct: 188 EARYIQLIKGEDAIEFPEDGYHGEDIAEHMRDFIAIHGDKYINTDSEERKKIFVDFALPR 247 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 + I++ L++ I D++ SE H+ + + I L + E Sbjct: 248 NIARIKEGLESYGIHFDVWFSEQTLHK--SGEVAETIQLLKDRDCTVE------------ 293 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSD 359 L + +++G + D L++++G TYFAAD+AY + K+E RGF+ +I + G+D Sbjct: 294 ----KEGALWLKGSVIGSEKDEVLVRNNGIPTYFAADIAYHRNKFEKRGFEWVINLWGAD 349 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H G+V R++A AA+ +++V+L +LVRLYR+G +MSKR G I+L +V+EVG Sbjct: 350 HHGHVARMKAAMAAIGVDPDRLDVVLFQLVRLYRNGEIARMSKRTGKSISLMDLVEEVGR 409 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D VRF + + LDFD ++S ENPVFYVQYA+AR S+F+ + L Sbjct: 410 DGVRFFFNTKASGSHLDFDLDLAVKESNENPVFYVQYAHARICSMFK----LLESEGIRL 465 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + I E EL+LI L+EYP + + EP +L Y++++AS FH ++ Sbjct: 466 PAASEIKAELLDKLEELELIRKLSEYPDEVRISAETLEPSRLTRYVHEVASTFHSFYNAC 525 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R V+ +L RL LV+ ++I + L+++ + +P M Sbjct: 526 R-------VRGEEEELMKARLVLVNCTRTVIKNVLDLLSINAPERM 564 >gi|310829664|ref|YP_003962021.1| arginyl-tRNA synthetase [Eubacterium limosum KIST612] gi|308741398|gb|ADO39058.1| arginyl-tRNA synthetase [Eubacterium limosum KIST612] Length = 563 Score = 537 bits (1384), Expect = e-150, Method: Composition-based stats. Identities = 198/596 (33%), Positives = 294/596 (49%), Gaps = 44/596 (7%) Query: 1 MYLFADFSSRLKNYLK----EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRP 56 MY+ +++K + + L I +E PR+ HG +TN AM L + Sbjct: 1 MYIREKIENQIKALIAGSVDAAMEAGDFSVEALPEIYLEVPREKEHGDYATNIAMQLPKQ 60 Query: 57 LGLDPLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115 P IAE IV + ID ++V IAG GFIN L ++ ++L I YG+ Sbjct: 61 AHKAPRVIAESIVRHMNIDSSYVEAVEIAGPGFINFKLKSDWVYEVLLEIEAMQENYGKT 120 Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175 G K N+EF+SANPTGPMH+G+ R +GD LA++ ++GY+VTRE+Y+NDAG QI Sbjct: 121 QGNAGKKYNLEFISANPTGPMHMGNARGGAIGDILAAIAEWTGYDVTREFYVNDAGNQIA 180 Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS-----SELLNFPEEKWL 230 S+ R++Q L D PE Y G ++ +E D+ + L E + Sbjct: 181 KFGDSLDARFRQ-LMGEDIPFPEDGYQGNDIRVHMEEFIDQEGGADACQKYLTMDEAERK 239 Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290 I DY+++ +K + DL+ I +DI+ SE + D I + L G VYE Sbjct: 240 GIFVDYALEKNLKKMHADLEKYGIHYDIWFSEQSLY--DQGAIESALKILQDSGAVYE-- 295 Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGF 349 L F ++ G + D L++ +G TYF D+AY K++ RGF Sbjct: 296 --------------KEGALWFTTSEFGCEKDDVLVRQNGLPTYFMGDIAYHLNKFKTRGF 341 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 D I V G+DH G++ RL+A A + +++ +LVRL RDG +MSKR G+ IT Sbjct: 342 DRCINVWGADHHGHIARLKAAMQAAGVNPDHLEIVIMQLVRLMRDGEIARMSKRKGEMIT 401 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 L +++EVG D+ RF+ R LDFD EQS ENPVFYVQYA+AR SI RQ Sbjct: 402 LTDLIEEVGRDAARFLFNMRSPDSHLDFDLDLAIEQSNENPVFYVQYAHARICSILRQMA 461 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 + D + EL L+ L+ P I A +P ++ Y DLA Sbjct: 462 E-------DKNTEGPANLTLLREKEELTLLDMLSNLPNEIIVAEEKMDPSRITHYAMDLA 514 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + FH ++ R V+ + +L RL L+ ++ + L I+G+++P M Sbjct: 515 AAFHSFYNACR-------VRVEDIELMKARLALIKGTKQVLANVLEILGIDAPERM 563 >gi|307825835|ref|ZP_07656051.1| arginyl-tRNA synthetase [Methylobacter tundripaludum SV96] gi|307733143|gb|EFO04004.1| arginyl-tRNA synthetase [Methylobacter tundripaludum SV96] Length = 586 Score = 537 bits (1383), Expect = e-150, Method: Composition-based stats. Identities = 180/615 (29%), Positives = 308/615 (50%), Gaps = 61/615 (9%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + ++ + + ++I I I+R RD HG ++N A++L++ + +P Sbjct: 1 MKKKIEELILQAVETLKSNGVLAQEITPNITIDRTRDPQHGDFASNLALMLAKQVNTNPR 60 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +AE ++A + D + V +AG GFIN ++ P+ +++ I G ++G + +G G K Sbjct: 61 QLAEKLIAALPQDTAIVKVELAGPGFINFFIDPTAQYQVIKQIHDQGPKFGLSNVGAGKK 120 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V +EFVSANPTGP+HVGH R A G +A L+ +G++V REYY+NDAG Q++ LA S++ Sbjct: 121 VQVEFVSANPTGPLHVGHGRGAAYGSAVADLLQATGFDVHREYYVNDAGRQMDILATSIW 180 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS----------------SELLNFPE 226 RY + P Y G Y++ + + + E + Sbjct: 181 LRYLEEC-GEVVHFPSNAYRGEYVREIAWNIHKNANNEYRRPVELVFEDIPPDEPAGGDK 239 Query: 227 EKWLPI----------------VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 E+ + + +++ I+ DL + + + SE D Sbjct: 240 EEHIDALIARAKTLLGAPLYQDFFQIGLNNILEDIKIDLSEFGVDYQEWFSERRL--MDD 297 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + ++ L G++YE F +GD+ DR +++ +G Sbjct: 298 GSVEKALERLRAAGHLYE----------------KDGATWFACADLGDEKDRVVVRENGQ 341 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFA+D+AY K +RGFD +I + G+DH GY+ R+ A A+ ++++ VLL + Sbjct: 342 STYFASDIAYHMNKLDRGFDQIINIWGADHHGYIPRVRAAIQALGADESKLKVLLVQFAS 401 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 LYR ++MS R+G+F+TLR + +EVG D+ RF + R++ + +DFD +S ENP Sbjct: 402 LYRGEEKVQMSTRSGEFVTLRQLRNEVGKDAARFFYVMRRSEQHMDFDLKLATSKSNENP 461 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 VFYVQYAYAR S+ RQ + + + P + + E L+ LA YP V+E Sbjct: 462 VFYVQYAYARVCSVLRQLDEKNWERN---LPLGMENLALLTEEHETNLLGTLARYPEVLE 518 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A + EP++L YL +LA+ FH +++ + + K+ RL L+ AV I+ Sbjct: 519 RAALQYEPHQLIQYLRELANEFHTYYNAHQF-------LVEDAKIRNARLNLICAVKQIL 571 Query: 571 NSGLNIIGVESPNEM 585 +GL+++ + +P M Sbjct: 572 ANGLSLLNINTPEAM 586 >gi|283850760|ref|ZP_06368047.1| arginyl-tRNA synthetase [Desulfovibrio sp. FW1012B] gi|283574003|gb|EFC21976.1| arginyl-tRNA synthetase [Desulfovibrio sp. FW1012B] Length = 552 Score = 537 bits (1383), Expect = e-150, Method: Composition-based stats. Identities = 202/579 (34%), Positives = 313/579 (54%), Gaps = 33/579 (5%) Query: 9 SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68 S L+ L+ + + + + IE PRD AHG L+TN A++ ++ + P +AE + Sbjct: 5 SHLRGLLETVLRESDIP--WPAKTTIEPPRDKAHGDLATNVALVAAKDAKMPPRALAEHL 62 Query: 69 -VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127 A + D + V +AG GF+N+ +P++ ++ + ++ G YG IG+GTK+ +EF Sbjct: 63 RQALLAADTGLAEVSVAGPGFLNVTFAPAFWQQTVLDVLEQGDRYGLLDIGQGTKIQVEF 122 Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187 VSANPTGP+H+GH R A VGD LA ++ +G+ V EYYINDAG Q+ L LS+ +RY++ Sbjct: 123 VSANPTGPLHIGHGRGAAVGDCLARVLRAAGFTVETEYYINDAGRQMRILGLSILYRYRE 182 Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247 L PE YY G Y+K + +L D+ LL EE + + + ++ IR Sbjct: 183 LL-GEPVTEPEDYYRGDYVKDLAGQLIDREGRGLLALSEEAATDACRLHGEKEILAGIRK 241 Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307 DL+ + HD++ E + D+L + Y+ Sbjct: 242 DLQDFRVHHDVWFPESKLLA--AGAVERTFDDLRAKNLAYD----------------KDG 283 Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367 F +T GDD DR L+KS G TYFA+D+AY K+ RGFD ++ + G+DH GYV R+ Sbjct: 284 AFWFATTTFGDDKDRVLVKSGGELTYFASDIAYHDDKFHRGFDVVVDIWGADHHGYVPRM 343 Query: 368 EAVAAAVSEKK-AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 +A AA+ A + V+L +LV L + G I MS RAG F TL VV EVG+D+ RFM Sbjct: 344 KACVAALGRDPEASLKVILVQLVNLLKGGEQIAMSTRAGKFETLADVVAEVGADAARFMF 403 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 L RK+ LDFD V ++S +NPV+YVQYA+AR RS+F +A + D Sbjct: 404 LSRKSDSHLDFDLDAVTKKSMDNPVYYVQYAHARVRSVFAKAAERGLVPDAASPALLARL 463 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 +E L +YP + A + P+ ++FYL +LA H +++ + Sbjct: 464 DTAEDLELLKL----LEQYPDTVAAAARSFAPHLVSFYLRELAGKLHRYYTVNQ------ 513 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A + +T R++L+ AVA ++ +GL ++GV +P++M Sbjct: 514 VLGAGDEAVTAARMRLLQAVALVVKNGLGLLGVSAPDKM 552 >gi|86157949|ref|YP_464734.1| arginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C] gi|109894970|sp|Q2II14|SYR_ANADE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|85774460|gb|ABC81297.1| arginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C] Length = 598 Score = 537 bits (1383), Expect = e-150, Method: Composition-based stats. Identities = 227/596 (38%), Positives = 345/596 (57%), Gaps = 28/596 (4%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDR---IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 R+ ++ + + + +E PRD HG + NAAM+L++ G P Sbjct: 2 VRDRVIELFRKALAQGADDGRWPAADAGFSVEAPRDPKHGDFAVNAAMVLAKQAGKPPRE 61 Query: 64 IAELIVARI---KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 +A+ IV + D+ + IAG GFIN+ LSP + L+ V G YGR +G+G Sbjct: 62 LAQAIVEAVRAADTAGDLAGLEIAGPGFINVRLSPDLWLRTLARAVAEGPAYGRTAVGQG 121 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 KV +E+VSANPTGPMHVGH R AVVGD + L+ ++G++V+REYY+ND GAQ+ TLA S Sbjct: 122 KKVIVEYVSANPTGPMHVGHGRNAVVGDGVQGLLRWAGFDVSREYYVNDYGAQVQTLARS 181 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V RYQ+ L+ +P YPG Y+K + L +Y + L+ PE +WL + +D++VQ Sbjct: 182 VHLRYQE-LHGRAVTMPPKSYPGEYVKDIAAGLKAEYGARFLDAPEAEWLTLFRDHAVQH 240 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT-- 298 ++ +IR+DL A+NI D + SE + + + + L + VY G LPPPKSK Sbjct: 241 VLGMIREDLAAVNISFDRWSSEKALY--ESGTVDRFLRFLEEKDLVYVGKLPPPKSKKGQ 298 Query: 299 --------TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350 + LFRS+ GD+VDRP+ K+DG+ TYF AD+AY K +R D Sbjct: 299 PPPQAQPDEEGVTAAEDLTLFRSSAYGDEVDRPVKKADGTPTYFCADIAYHWDKRQR-AD 357 Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 ++ V+G+DH GYV RLEA A+ + ++V+L ++V L R G +KMSKRAG ++L Sbjct: 358 ALVDVLGADHGGYVPRLEAAMEALGASRKDLHVVLIQMVSLMRGGESVKMSKRAGTLVSL 417 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R VVDEVG D+ RF+ L R++ LDFD K+Q+ +NPVFYVQY +AR +IF++A++ Sbjct: 418 REVVDEVGRDATRFIFLTRRSDAPLDFDVELAKKQTLDNPVFYVQYGHARLAAIFQKARE 477 Query: 471 IFPDL-DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 + +FDL + E LI +A +P ++ A +A EP+++AFYL + Sbjct: 478 AGHAVPEFDLDAARTLG-----SPEEQDLIRRIAAFPDLLAAAALAYEPHRVAFYLQETI 532 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + FH ++ G+++ V + T RL L A+ ++ +GL ++GV +P+ M Sbjct: 533 AAFHSWYTQGKKSGEK--VIGPDPVKTAARLFLCRALKQVLANGLAVLGVSAPDRM 586 >gi|319944918|ref|ZP_08019180.1| arginine--tRNA ligase [Lautropia mirabilis ATCC 51599] gi|319741488|gb|EFV93913.1| arginine--tRNA ligase [Lautropia mirabilis ATCC 51599] Length = 575 Score = 537 bits (1383), Expect = e-150, Method: Composition-based stats. Identities = 196/597 (32%), Positives = 305/597 (51%), Gaps = 50/597 (8%) Query: 9 SRLKNYLKEIDCKIKVEKKILDRIV--IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + L+ L I VE ++ + +ERPR HG L+TN AM L+RPL P +AE Sbjct: 7 NELRQLLAHTMQAIGVEAELAASVTPSLERPRQADHGDLATNLAMQLARPLKKSPRAVAE 66 Query: 67 LIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +VA + P + IAG GFIN L+P+ ++++ ++ G ++G+ G + Sbjct: 67 QLVAALMEQPGATDLIAQAEIAGPGFINFRLTPAAHQRVVHEVLTQGEQFGQQ-PSNGQQ 125 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V +EFVSANPTGP+HVGH R A +GD L +L+A G++V RE+Y NDAGAQI+ LALSV Sbjct: 126 VMLEFVSANPTGPLHVGHGRQAALGDVLGNLLASQGWKVHREFYYNDAGAQIHNLALSVQ 185 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE------KWLPIVKDY 236 R + + +D P Y G Y+ + + + + ++ P E L V+ + Sbjct: 186 AR-GRGISPDDPSFPADGYRGDYIAEIARAFVARETVQVNGQPPETATGDLDDLDAVRRF 244 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 +V + + DL A + D + E + + + + L G+ +E Sbjct: 245 AVACLRREQDLDLAAFGVSFDRYYLESSLYT--DGKVEEAVARLVAGGHTFE-------- 294 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 L R+T GDD DR + KS+G YTYF D+AY K++RGF I + Sbjct: 295 --------QDGALWLRTTDYGDDKDRVMRKSEGGYTYFVPDVAYHLGKWQRGFTQAINIQ 346 Query: 357 GSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414 GSDH G V R+ A A + K + +L ++VR+ R+G +K+SKRAG ++TLR ++ Sbjct: 347 GSDHHGTVARVRAGLQALDMGIPKGYPDYVLHKMVRVMRNGEEVKISKRAGSYVTLRDLI 406 Query: 415 DE-------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467 + G D+VRF ++ RK FD +S ENPV+YVQYA+AR SI Q Sbjct: 407 EWSGGGDETRGRDAVRFFLISRKGDTEFTFDVDLALSRSDENPVYYVQYAHARICSILAQ 466 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 A + I + +E L+ +A +P ++ A P++LA+YL D Sbjct: 467 AAERGGQSAGAEGRGAHI--DRLTAPTEYALMARMAAFPAMLTEAARELAPHQLAYYLKD 524 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNE 584 LA+ FH ++ R V ++ +L R+ L+ AV +++ G+ +IGV +P Sbjct: 525 LAADFHAFYNAER-------VLVDDAELQSARMALLEAVRTVLRRGMALIGVSAPER 574 >gi|113866190|ref|YP_724679.1| arginyl-tRNA synthetase [Ralstonia eutropha H16] gi|123134540|sp|Q0KFB0|SYR_RALEH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|113524966|emb|CAJ91311.1| Arginyl-tRNA synthetase [Ralstonia eutropha H16] Length = 595 Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats. Identities = 192/615 (31%), Positives = 294/615 (47%), Gaps = 64/615 (10%) Query: 9 SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68 S L + + L + ERP+ AHG L+ N AM ++R L +P +A+ I Sbjct: 7 SNLAAAFTDAVRALAPADATLPAVTFERPKVAAHGDLACNVAMQVARALKSNPRELAQRI 66 Query: 69 VARIKID----PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 V ++ D V ++ IAG GFINL L+P+ +L +++ G YG G +V Sbjct: 67 VDAVQADTRAQGLVQAMEIAGPGFINLRLTPAAKADVLRAVLAEGDHYGARERGVHGQVL 126 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGP+HVGH R A +GD LA+L+++ G+ V RE+Y NDAG QI TLALSV R Sbjct: 127 VEFVSANPTGPLHVGHGRQAALGDALANLLSWQGWHVHREFYYNDAGVQIQTLALSVQAR 186 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPIVKDYSV 238 + L D+ PE Y G Y+ + + + + + ++ ++V Sbjct: 187 AR-GLKPGDASWPEAAYNGDYIADIAADFLAGKTVSASDGEPVTASGNVEDIDSIRKFAV 245 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + DL+A ++ D + E + + + +L +G YE Sbjct: 246 TYLRNEQDIDLQAFGVKFDRYYLESSLY--SDGRVEAAVQSLVGKGKTYES--------- 294 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 L R+T GDD DR + KSDG+YTYF D+AY K+ERGF +I V GS Sbjct: 295 -------EGALWLRTTDDGDDKDRVMKKSDGTYTYFVPDVAYHTTKWERGFTKVINVQGS 347 Query: 359 DHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 DH G + R+ A + + + +L ++V + ++G +K+SKRAG ++T+R +++ Sbjct: 348 DHHGTIARVRAGLQGLDMGIPQGYPDYVLHKMVTVMKNGEEVKISKRAGSYVTVRDLIEW 407 Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 G D+VRF +L RK FD +Q+ ENPV+ Sbjct: 408 SNGGDETIRGCLDTGVADWPQHFTRGRDAVRFFLLSRKADTEFVFDVDLALKQNDENPVY 467 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES--EFDTSELQLIVHLAEYPRVIE 510 YVQYA+AR SIF + + + E L LAE+P ++ Sbjct: 468 YVQYAHARICSIFESWGGADWEARLAELAGADLSAVTGPEASAQAQALGRRLAEFPDMLS 527 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A P+ +AFYL DLA FH ++ R V ++ + RL L+ A ++ Sbjct: 528 GAAAELAPHAVAFYLRDLAGDFHAFYNADR-------VLVDDEAVKRARLALLAATRQVL 580 Query: 571 NSGLNIIGVESPNEM 585 +GL +IGV +P M Sbjct: 581 RNGLAVIGVSAPRRM 595 >gi|109940178|sp|Q8PFR2|SYR_XANAC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS Length = 562 Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats. Identities = 193/591 (32%), Positives = 307/591 (51%), Gaps = 37/591 (6%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 + A + + ++ + + L V+ERP+ HG +TNAAM+L++ +P Sbjct: 1 MKALLRALIGQGIEALRANGTLPADTLPPDFVVERPKTREHGDFATNAAMLLAKAARSNP 60 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +A+ ++A + DV V IAG GFIN +L+P+ ++ ++ ++ G +YGR L G G Sbjct: 61 RALAQALLAALPASDDVAKVEIAGPGFINFHLAPTAYQREVAHVIKQGHDYGRGLAGNGR 120 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 V +E+VSANPTGP+HVGH R A +GD+LA ++ +G+ V RE+Y NDAG QI LALSV Sbjct: 121 SVGVEYVSANPTGPLHVGHGRAAAIGDSLARVLDANGWNVKREFYYNDAGVQIENLALSV 180 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDY 236 R Q L + PE Y G Y+ V D + + L ++ + Sbjct: 181 QAR-AQGLTPDSDGWPENGYRGDYIADVANAYLAGDTVDLEGHLVTGTKDPADLESIRRF 239 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 +V + DL A + DI+ E ++ + + + L G+ YE Sbjct: 240 AVAYLRNEQNHDLAAFRVDFDIYFLESSLYK--DGKVEEAVQKLIASGHTYE-------- 289 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 + L +ST GDD DR + KSDG+YTYF D+AY K++RG++ I + Sbjct: 290 --------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGYERAITEL 341 Query: 357 GSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414 G+DH G + R+ A A+ + +L ++V + R G +K+SKRAG ++TLR ++ Sbjct: 342 GADHHGSLTRVRAGLQAMELGIPQGWPEYVLHQMVTVMRGGEEVKLSKRAGSYVTLRDLI 401 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 +E +D+VR+ ++ RK L FD + QS +NPVFYVQYA+AR S+ RQA++ Sbjct: 402 EETSADAVRWFLIARKPDSQLTFDIDLARAQSNDNPVFYVQYAHARVCSVLRQAQEKGYK 461 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 D + D L +++ L+ YP V+E A A EPY++A YL +LA FH Sbjct: 462 YDQ---AHGLAELACLDDEHSLAVMLELSRYPEVVEIAGQALEPYQIAQYLRELAHAFHT 518 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + V + +L L A ++ +GL ++GV +P +M Sbjct: 519 WYHNSK-------VLVDAAAERDAKLTLAVATQQVLANGLELLGVSAPEKM 562 >gi|257784334|ref|YP_003179551.1| arginyl-tRNA synthetase [Atopobium parvulum DSM 20469] gi|257472841|gb|ACV50960.1| arginyl-tRNA synthetase [Atopobium parvulum DSM 20469] Length = 614 Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats. Identities = 192/633 (30%), Positives = 316/633 (49%), Gaps = 69/633 (10%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + ++ L E ++ + +D + +ERP+D ++G S+ AM ++ P Sbjct: 1 MREKIEELVRQALAEAQAAGELPEFQIDDVGLERPQDSSNGDWSSTVAMRSAKLAHKAPR 60 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 IA +VA I D ++ V +AG GF+N YLS + +I +++ G ++GR+ G G K Sbjct: 61 DIAAALVAHIVKDAQIERVEVAGPGFVNFYLSTAAGNEIFNTVRKQGADFGRSSFGSGQK 120 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V +E+VSANP GP+H+GH R A +GD+L+ ++AF+GYEV REYY+ND G+Q++ S+ Sbjct: 121 VQVEYVSANPVGPLHIGHGRWAALGDSLSRILAFAGYEVEREYYVNDHGSQMDVFGHSIS 180 Query: 183 WRYQQAL-------------------------YNNDSDLPEGY--------------YPG 203 RY Q + + D PE + Y G Sbjct: 181 KRYLQLIDIMQKRGIDADTAAQVLAEDRNAYVADEDDAHPEEHPFTDEFINSLGGNAYAG 240 Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 Y+ +G N E++ + ++ + M++ I+ D++ SE Sbjct: 241 DYIVDLGLFFLKNDGELWANKSEDERMVEFRERGYKMMLESIKKTCHNARADFDVWFSER 300 Query: 264 DFHRGDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 + D + +D L + GY+Y D L FRST GDD Sbjct: 301 SLYVKDSQGKDAVDRALDALDKLGYLYRS---------------DEGALFFRSTDFGDDK 345 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR L+K++G YTYFA+D+AY K++R D++I + G+DH GY++R+ + A A+ Q Sbjct: 346 DRVLIKTNGEYTYFASDVAYHWNKFQR-VDHVIDIWGADHHGYIQRVRSAATALGY-PTQ 403 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 VLL +LV L R+G+ ++MSKR G I ++ EVG D+ R+ ++ + +++++DFD Sbjct: 404 FEVLLGQLVNLLRNGVAVRMSKRKGTGIHFDELLAEVGVDATRYTLVSKSSNQMIDFDIE 463 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQ--------AKDIFPDLDFDLFPRNVIPQESEFD 492 +VK Q NPV+YVQYA+AR SI R+ AK + D +V+ D Sbjct: 464 QVKRQDSSNPVYYVQYAHARICSILRRAAGIDLEEAKTLGMDAVASKAIGSVVDLGLLSD 523 Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552 +E L L E+P +IE+ + P+++ Y+ +LA FH ++ + P + Sbjct: 524 AAEQALARKLFEFPGLIESCARDRAPFRITHYIEELAGQFHAFYTVCQVLPSEGRPL--D 581 Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +L+ RL A ++ LN+IGV +P M Sbjct: 582 TELSKARLAACDATRRVLAIALNLIGVSAPEVM 614 >gi|297570951|ref|YP_003696725.1| arginyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595] gi|296931298|gb|ADH92106.1| arginyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595] Length = 557 Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats. Identities = 187/587 (31%), Positives = 309/587 (52%), Gaps = 41/587 (6%) Query: 6 DFSSRLKNYLKEIDCK--IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 + + N +++ I ++ + L + +ERPR HG +TN AM L + G++P Sbjct: 5 ELKVLIGNIIRDAAVAGTIALDPETLPEVRVERPRVREHGDWATNVAMQLGKKAGMNPRE 64 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 A+L+V ++ DP VD IAG GFIN+ ++ + ++ +I+ G +G KG + Sbjct: 65 FAQLVVDKLIEDPGVDHADIAGPGFINITVNAAVAGELARTILEKGEAFGLGESLKGDVI 124 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+E+VSANPTGP+H+G R A VGD+LA ++ SG V REYY ND G+QI+ A S+ Sbjct: 125 NLEYVSANPTGPIHIGGARWAAVGDSLARILEASGARVIREYYFNDHGSQIDRFAKSLLA 184 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY--SSELLNFPEEKWLPIVKDYSVQAM 241 R + + PE Y G Y++ + + + ++ S+ L +E+ +++ V M Sbjct: 185 RARGL------EAPEDGYGGQYIEDIARAVLEEKSNGSDPLALADEQAQEFFREHGVTRM 238 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 I+ +L ++ D++ ED H + + ID+L +G +YE Sbjct: 239 FGEIKKELADFRVEFDVYFHEDSLH--ESGAVNQAIDDLRNKGVIYE------------- 283 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 RST GDD DR ++KSDG YFA D+AY+ K ERG D++I ++G+DH Sbjct: 284 ---QDGATWLRSTDFGDDKDRVIIKSDGDAAYFAGDIAYYLNKRERGADHVIIMLGADHH 340 Query: 362 GYVKRLEAVAAAVSEKKAQ---INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 GY+ R+ A+A A + + + +L+ +LV L +DG P++MSKRAG + L +VD G Sbjct: 341 GYIGRMYAMARAFGDTAGKGENLELLIGQLVNLVQDGQPVRMSKRAGTIVVLSDLVDAAG 400 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ ++ L+ D + ++ ENPV+YVQYA+AR +S+ A Sbjct: 401 VDAARYSLVRAAMDTTLEIDLGLISSRTNENPVYYVQYAHARTKSVDANAASHG------ 454 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 R V ++ +LI LA++P ++ + +EP+++A YL +LA +H + Sbjct: 455 -VTREVFTPALLDSAADSELIAKLAQFPEIVAQSAQLREPHRVARYLEELAGAYHAWYGA 513 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R PR L RL L A ++ +GL+++GV +P +M Sbjct: 514 SRVTPR---ADEEVSDLHRTRLWLNDAAGQVLANGLSLLGVSAPEKM 557 >gi|94309041|ref|YP_582251.1| arginyl-tRNA synthetase [Cupriavidus metallidurans CH34] gi|123260476|sp|Q1LS94|SYR_RALME RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|93352893|gb|ABF06982.1| Arginyl-tRNA synthetase [Cupriavidus metallidurans CH34] Length = 602 Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats. Identities = 192/615 (31%), Positives = 299/615 (48%), Gaps = 64/615 (10%) Query: 9 SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68 S+L + + L + ERP+ AHG L+ N AM +++ L +P +A+ + Sbjct: 7 SQLAAAFTDAVRALAPADANLPAVTFERPKAAAHGDLACNIAMQVAKSLKTNPRELAQKV 66 Query: 69 VARIKID----PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 V +K D V ++ IAG GFINL LSP ++L +++ G YG +G+ +V Sbjct: 67 VDAVKADSRATALVAALEIAGPGFINLRLSPEARAEVLRAVLADGDRYGARPVGEHGQVL 126 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGP+HVGH R A +GD LA+L+A+ G+ V RE+Y NDAG QI+TLA+SV R Sbjct: 127 VEFVSANPTGPLHVGHGRQAALGDALANLLAWQGWSVHREFYYNDAGVQIHTLAISVQAR 186 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPIVKDYSV 238 + L D+ PE Y G Y+ + + + + L ++ ++V Sbjct: 187 AR-GLKPGDAGWPESAYNGDYIADIAADFLAGKTVSASDGEPVTASGNIEDLESIRKFAV 245 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + DL+A ++ D + E + + + +L +G YE Sbjct: 246 TYLRNEQDIDLQAFGVKFDRYYLESSLY--SDGRVEAAVQSLIAKGKTYES--------- 294 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 L R+T GDD DR + K DG+YTYF D+AY K+ERGF +I V GS Sbjct: 295 -------EGALWLRTTDDGDDKDRVMKKGDGTYTYFVPDVAYHTTKWERGFSKVINVQGS 347 Query: 359 DHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 DH G + R+ A + + + +L ++V + ++G +K+SKRAG ++T+R +++ Sbjct: 348 DHHGTIARVRAGLQGLDIGIPQGYPDYVLHKMVTVMKNGEEVKISKRAGSYVTVRDLIEW 407 Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 G D+VRF +L RK FD +Q+ ENPV+ Sbjct: 408 SNGGEETIRGCLEAGVADWPAHFTRGRDAVRFFLLSRKADTEFVFDVDLALKQNDENPVY 467 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD--TSELQLIVHLAEYPRVIE 510 YVQYA+AR SIF + + + D + L LAE+P ++ Sbjct: 468 YVQYAHARICSIFEAWGGADWEARLGELASVDLAAVTAADVSPQAIALGRRLAEFPDMLA 527 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A+ P+ +AFYL DLA FH ++ R V ++ + RL L+ A ++ Sbjct: 528 AASSELAPHAVAFYLRDLAGDFHAFYNADR-------VLVDDETVKRARLALLAATRQVL 580 Query: 571 NSGLNIIGVESPNEM 585 +GL +IGV +P M Sbjct: 581 KNGLAVIGVSAPQRM 595 >gi|159039563|ref|YP_001538816.1| arginyl-tRNA synthetase [Salinispora arenicola CNS-205] gi|157918398|gb|ABV99825.1| arginyl-tRNA synthetase [Salinispora arenicola CNS-205] Length = 554 Score = 536 bits (1381), Expect = e-150, Method: Composition-based stats. Identities = 183/583 (31%), Positives = 301/583 (51%), Gaps = 34/583 (5%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 A+ + + + + +++ +L ++ +ERPR+ HG ++ A+ LS+ +G+ P Sbjct: 4 AELAEVVLTAAHTVLAQRGLDRAMLPEQTAVERPRNAEHGDYASTLALQLSKKVGVPPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + ++ + SV IAG GF+N+ L + ++ IV +G EYGR+ G + Sbjct: 64 LAAALADQLGQTVGIKSVEIAGPGFLNIRLDAAAAGQLAQVIVEAGEEYGRSDRLVGQSI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L+ L+ +G EV EYY NDAG+QI+ A S+ Sbjct: 124 NLEFVSANPTGPVHIGGVRWAAVGDALSRLLRATGAEVGTEYYFNDAGSQIDRFARSLLA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G YL + +++ + ++L + + + V+ M Sbjct: 184 AAK------GEPPPEDGYAGAYLTEIAQQVQSR-RPDVLALDDAAAQEVFRVEGVELMFA 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L+ ++ D + +E D H D + ++ L +QG++ E Sbjct: 237 EIKSSLRDFGVEFDTYFNEKDLH--DRGELELALERLRQQGHISEA-------------- 280 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 R+T GDD DR L KS+G +TYFAAD AY+ K ERG++ ++ ++G+DH GY Sbjct: 281 --DGATWLRTTHFGDDKDRVLRKSNGEWTYFAADCAYYLDKRERGYERVVLMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 + R++A+ A + A + +L+ ++V L RDG P++MSKRAG + L +VD +G D+ Sbjct: 339 LGRMKAMVACFGDDPAHNLEILIGQMVNLVRDGAPVRMSKRAGTVVRLEDLVDAIGVDAA 398 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 R+ + +D D +++NPV+YVQY AR S+ R A ++ Sbjct: 399 RYALARYSIDSPIDIDIELWTRATRDNPVYYVQYVAARTASVGRNAAEVG----LTRGQP 454 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 E E +L+ LAE+P V+ A +EP+++A YL DLA +H + + R Sbjct: 455 TDFHPELLDHDKENELLKALAEFPAVVATAAELREPHRIARYLEDLAGAYHRFYDNCRVL 514 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 PR L RL L A +I +GL ++GV +P M Sbjct: 515 PRG---DEEITDLHRARLWLNDATRVVIANGLRLLGVSAPERM 554 >gi|172040372|ref|YP_001800086.1| arginyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109] gi|171851676|emb|CAQ04652.1| unnamed protein product [Corynebacterium urealyticum DSM 7109] Length = 569 Score = 536 bits (1381), Expect = e-150, Method: Composition-based stats. Identities = 190/583 (32%), Positives = 301/583 (51%), Gaps = 34/583 (5%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 A+ S + +E+ + ++ + D +ERPR+ HG +TN AM ++ G +P Sbjct: 19 AELSEFIARIAREVLTERGLDASVVPDNPTVERPRNPEHGDYATNVAMQTAKKAGTNPRE 78 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 + + ++ P++D +AG GFIN+ L+ + KI+ +I+ +G ++GR KGTK+ Sbjct: 79 LGTWLAEKLAASPEIDEASVAGPGFINIRLAAAAQGKIVENILAAGQDFGRGDAYKGTKI 138 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L L+A G EVTREYY ND G QI+ A S+ Sbjct: 139 NLEFVSANPTGPIHLGGTRWAAVGDSLGRLLAAQGGEVTREYYFNDHGGQIDRFAKSLLA 198 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y++ + ++ + + + + + V+ M Sbjct: 199 AARN------EPTPEDGYGGQYIQDIAAQVV-EANPTWGELSDADAQELFRAQGVELMFD 251 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ LK + D+F E+ + + I+ L G +YE Sbjct: 252 HIKTTLKQFGTEFDVFFHENSLF--ESGAVDKAIEELKSNGNLYEA-------------- 295 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 RS+ GDD DR ++KSDG+ Y A D+AY K RG D IY++G+DH GY Sbjct: 296 --DGAWWLRSSDFGDDKDRVVIKSDGNAAYIAGDIAYIADKINRGHDLCIYMLGADHHGY 353 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA+ Q+ V++ ++V L RDG ++MSKRAG ITL +V+ +G D+ R Sbjct: 354 IARLQAAAAALGYDPQQVEVMIGQMVNLVRDGEAVRMSKRAGTIITLDDLVEAIGVDAAR 413 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ LD D QS ENPVFYVQYA+AR S+ R+A + +DF + Sbjct: 414 YALIRSSVDSSLDIDMDLWASQSNENPVFYVQYAHARLCSLQRKADEQG--VDFAGADLS 471 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ + E LI L E+P+V+ A +EP+++A Y LA FH + + P Sbjct: 472 LLTHDREG-----TLIRSLGEFPKVVRTAAELREPHRIAHYAEKLAGDFHRFYDACQVLP 526 Query: 544 RLRFVQANNRK-LTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + RL L A ++ + L+++GV +P M Sbjct: 527 KADEPTGTDAAPVFHARLALAAATRQVLENALSLVGVSAPERM 569 >gi|313902824|ref|ZP_07836221.1| arginyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965] gi|313466944|gb|EFR62461.1| arginyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965] Length = 566 Score = 536 bits (1381), Expect = e-150, Method: Composition-based stats. Identities = 191/595 (32%), Positives = 300/595 (50%), Gaps = 41/595 (6%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDR----------IVIERPRDCAHGHLSTNAA 50 M A +++ L+ ++ + +E PRD HG ++NAA Sbjct: 3 MDPVAAARQQVRQALESAAAAAVAAGELPGEAAPGTEAWRGVQVEVPRDPRHGDFASNAA 62 Query: 51 MILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI 110 ++L+ P +A ++ + + V AG GF+N +L+ + R+ + +I+ +G Sbjct: 63 LVLAGRARRAPREVAAVLERHLPGGAWLRKVEAAGPGFLNFHLADDWWREGVRAILRAGE 122 Query: 111 EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDA 170 +GR G G +V +EFVSANPTGP+ V + R A +GD LA ++ +GY V +E+Y+NDA Sbjct: 123 AFGRTDRGGGLRVQVEFVSANPTGPLGVVNARAAALGDALARVLQAAGYRVEKEFYLNDA 182 Query: 171 GAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWL 230 G QI LALS+ R +Q L +++PEG YPG YL + ++L LL+ PEE+ Sbjct: 183 GNQIRKLALSLEARMRQEL-GQPAEIPEGGYPGEYLIDIARDLLAAEGPALLDRPEEERW 241 Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290 + ++V+A++ +R L ++ D + E + +++ L ++G VYE Sbjct: 242 ERMARFAVEAIVAQMRTQLARFGVEFDEWYPETRV--REAGYPERVLERLRQRGMVYE-- 297 Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350 L RS+ VGDD DR L++ DG YTY D+AY K+ERGF Sbjct: 298 --------------QDGALWLRSSAVGDDKDRVLVRRDGEYTYTLVDIAYHLTKWERGFQ 343 Query: 351 NMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 I + G DH G+V ++A A+ VLL ++V L R G ++MSKR G+ +T+ Sbjct: 344 RAIDIWGQDHHGHVVPMQAALRALGLPDGWFEVLLTQMVHLVRGGQAVRMSKRRGELVTM 403 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 +DEV D+ R+ L R LDFD +S ENPV+YVQYA+AR I RQA Sbjct: 404 AEFLDEVDVDAARYFFLMRSPDTHLDFDLDLANLRSSENPVYYVQYAHARACGILRQA-- 461 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 + + L P D +E L L + P + A A+EP++L +YL D+A+ Sbjct: 462 ---EAEAGLRPDGSADLSPLGDPAERDLARRLLDLPGEVAAAAEAREPHRLTYYLKDVAT 518 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +FH ++ R V + RL LV A ++ + L ++GV +P M Sbjct: 519 LFHQFYTRCR-------VLGEEDPVARARLVLVDATRQVLATALGLLGVTAPERM 566 >gi|302877425|ref|YP_003845989.1| arginyl-tRNA synthetase [Gallionella capsiferriformans ES-2] gi|302580214|gb|ADL54225.1| arginyl-tRNA synthetase [Gallionella capsiferriformans ES-2] Length = 558 Score = 536 bits (1381), Expect = e-150, Method: Composition-based stats. Identities = 192/592 (32%), Positives = 314/592 (53%), Gaps = 41/592 (6%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + +F S + E ++ E+ + ++IERP+ +HG + N AM L++PL Sbjct: 1 MSVVLNFKSHITELFVEAMREVAPEQGSVS-VLIERPKQASHGDYACNLAMQLAKPLRKS 59 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P IA ++A + ++ V IAG GFINL+++ + + I+ +++ +G YG +G+G Sbjct: 60 PRDIAHALIAALPKSDVIEKVEIAGAGFINLFVTHAAKQAIVHAVLHAGAGYGHLHVGQG 119 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +V +EFVSANPTGP+HVGH R A VGD L +++ +G+ VTRE+Y NDAGAQI+ L S Sbjct: 120 RRVQVEFVSANPTGPLHVGHGRGAAVGDCLCNVLQAAGWNVTREFYYNDAGAQIDNLMRS 179 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGK-----ELADKYSSELLNFPEEKWLPIVKD 235 V R + + +D PE Y G Y+ V + E + + + ++ Sbjct: 180 VQLRC-KGITPDDPSWPEAGYRGDYIADVARAYMACETVEADDQRTTGCGDVDDVVAIRH 238 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 ++V + + DL+A +++ D+F E + + + + L G+ YE Sbjct: 239 FAVAYLRREQDLDLRAFHVEFDVFSLESALY--SEGKVDETVAGLIASGHTYE------- 289 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 L R+T GDD DR + KSDG YTYF D+AY K+ RGF +I Sbjct: 290 ---------QDDALWLRTTDFGDDKDRVMRKSDGGYTYFVPDVAYHLDKWRRGFVRVINE 340 Query: 356 MGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 G+DH + R+ A A+ K + +L ++V + ++G +K+SKRAG ++TLR + Sbjct: 341 QGADHHSTITRVRAGLQALDVGIPKGWPDYVLHQMVTVLKNGEEVKISKRAGSYVTLRDL 400 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 +DEVG D+ R+ + R L FD K +S +NPV+Y+QYA+AR ++ + + Sbjct: 401 IDEVGCDATRYFLAARHPDSQLVFDIDLAKSKSNDNPVYYIQYAHARISTVL----ETWG 456 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 L NV +SE+ E L+ + +YP+VIENA P+ +AFYL +LA+ FH Sbjct: 457 GERLSLLNANVSLLDSEY---ETALLQQIIDYPQVIENAAQELAPHLIAFYLKELAAAFH 513 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +++ R + + RL L+ A A ++ +GL ++GV +P +M Sbjct: 514 SYYNASRF-------LVEDEAVKCARLALIAAAAQVMKNGLALLGVGAPEKM 558 >gi|325066827|ref|ZP_08125500.1| arginyl-tRNA synthetase [Actinomyces oris K20] Length = 561 Score = 536 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 190/587 (32%), Positives = 308/587 (52%), Gaps = 37/587 (6%) Query: 6 DFSSRLKNYLKEIDCKI--KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 + ++ ++ L+E + + + +ERPR+ HG STN AM L++ P Sbjct: 5 ELAAAIRTVLEEASAEGSLALPAAEIPAPRVERPRNRDHGDWSTNVAMQLAKKASTKPRD 64 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +AEL+V R++ + SV +AG GF+N+ L + ++ SIV +G YGRN G + Sbjct: 65 LAELLVPRLEALDGIASVEVAGPGFLNIRLDAASAGELARSIVEAGQAYGRNDSLSGQHI 124 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+E+VSANPTGP+H+G R A VGD+LA +++ G +VTREYY ND G QI+ A S+ Sbjct: 125 NLEYVSANPTGPVHLGGARWAAVGDSLARILSACGAQVTREYYFNDHGTQIDRFARSLLA 184 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKEL-ADKYSS---ELLNFPEEKWLPIVKDYSVQ 239 + + PE Y G Y+ + +++ AD+ ++ + P+ + + + V Sbjct: 185 SAR------GQETPEDGYGGAYISEIAQQVTADELAAGRPDPATLPDAEATEVFRSRGVD 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M ++ +L A D+F ED H + I L +G + Sbjct: 239 LMFAAVKAELHAFRSDFDVFFHEDSLHT--SGAVERAIARLRERGVI------------- 283 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + R+T GDD DR L+KSDG+ YFAADLAY+ K ERG D +Y++G+D Sbjct: 284 ---EERDGATWLRTTDFGDDKDRVLIKSDGNAAYFAADLAYYLDKRERGADCAVYLLGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 H GY+ R+ A+ AA + + +L+ +LV L R+G+P++MSKRAG +TL +VD VG Sbjct: 341 HHGYIGRMMAMCAAFGDTPGTNMQILIGQLVNLVRNGVPVRMSKRAGTIVTLEDLVDAVG 400 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ + ++D D + +NPV+YVQYA+AR R++ R A + D + Sbjct: 401 VDAARYALARSSMDSMIDIDLDLLASSISDNPVYYVQYAHARTRNVARNAAEHGVSRDPN 460 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 P + D ++ L+ LA++P + A +E +++A YL LA+ +H + Sbjct: 461 EAPFEPGALD---DPADAALLGVLAQFPATVAQAAQLREQHRVARYLEQLAAAYHAWYGA 517 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R PR + + RL L AV ++ +GL+++GV +P M Sbjct: 518 TRVTPRGDDAVDSG---HVARLWLNDAVGQVLANGLDLLGVSAPERM 561 >gi|329945378|ref|ZP_08293141.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386] gi|328529000|gb|EGF55931.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386] Length = 570 Score = 536 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 192/587 (32%), Positives = 309/587 (52%), Gaps = 37/587 (6%) Query: 6 DFSSRLKNYLKEIDCKI--KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 + ++ ++ L+E + + + +ERPR+ HG STN AM L++ G P Sbjct: 14 ELAAAIRTVLEEASAEGSLALPAAEIPDPRVERPRNRDHGDWSTNVAMQLAKKAGTRPRD 73 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +AEL+V R++ V SV +AG GF+N+ L + ++ SIV +G YGRN G + Sbjct: 74 LAELLVPRLEALDGVASVEVAGPGFLNIRLDAASAGELARSIVEAGEAYGRNDSLSGQHI 133 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+E+VSANPTGP+H+G R A VGD+LA +++ G VTREYY ND G QI+ A S+ Sbjct: 134 NLEYVSANPTGPVHLGGARWAAVGDSLARILSACGARVTREYYFNDHGTQIDRFASSLLA 193 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKEL-ADKYSS---ELLNFPEEKWLPIVKDYSVQ 239 + ++PE Y G Y+ + +++ AD+ ++ + P+ + + + V Sbjct: 194 SAR------GQEIPEDGYGGAYIGEIAQQVTADELAAGRPDPATLPDAEAAEVFRARGVD 247 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M ++ +L A D+F ED H + I L +G + Sbjct: 248 LMFAAVKAELHAFRSDFDVFFHEDSLHT--SGAVERAIARLRERGVI------------- 292 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + R+T GDD DR L+KSDG+ YFAADLAY+ K ERG D +Y+ G+D Sbjct: 293 ---EERDGATWLRTTDFGDDKDRVLIKSDGNAAYFAADLAYYLDKRERGTDCALYLFGAD 349 Query: 360 HSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 H GY+ R+ A+ AA + + +L+ +LV L R+G+P++MSKRAG +TL +VD VG Sbjct: 350 HHGYIGRMMAMCAAFGDTPGTNMQILIGQLVNLVRNGVPVRMSKRAGTVVTLEDLVDAVG 409 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ + ++D D + + +NPV+YVQYA+AR R++ R A + D Sbjct: 410 VDAARYALARSSMDSMIDIDLDLLASSTSDNPVYYVQYAHARTRNVARNAAEHGVSRDPK 469 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + P + D ++ L+ LA++P + A +E +++A YL LA+ +H + Sbjct: 470 VAPFEPAALD---DPADTALLGVLAQFPATVAQAASLREQHRVARYLEQLAAAYHTWYGA 526 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R PR ++ + RL L AV ++ +GL ++GV +P M Sbjct: 527 TRVTPRGDDAVSSG---HVARLWLNDAVGQVLANGLGLLGVTAPERM 570 >gi|261856695|ref|YP_003263978.1| arginyl-tRNA synthetase [Halothiobacillus neapolitanus c2] gi|261837164|gb|ACX96931.1| arginyl-tRNA synthetase [Halothiobacillus neapolitanus c2] Length = 588 Score = 536 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 188/616 (30%), Positives = 315/616 (51%), Gaps = 61/616 (9%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + A RL N ++ + + ++ I + P+D +HG +TN A+ +++P+G+ P Sbjct: 1 MKAQIELRLLNAVRLMQEQGVMDAAINVTPALTVPKDPSHGDFATNIALQIAKPMGVPPR 60 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 A+ ++ + + + IAG GF+N ++ P+ ++ +I+ +G +G + G+G K Sbjct: 61 VAAQCLLEALTDREGIKQIEIAGPGFLNFFVDPAAAFALIDTILAAGGTFGHSRFGEGKK 120 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V +EFVSANPTGP+HVGH R A G +A L+A G++V REYY+NDAG Q++ LA+S++ Sbjct: 121 VQVEFVSANPTGPLHVGHGRGAAYGAVVADLLAAVGFDVYREYYVNDAGRQMHILAVSIW 180 Query: 183 WRYQQALYNNDSDLPEGYYPGV-YLKHVGKELADKYSSELLNFPE--------------- 226 RY +A P Y Y+ + K L ++ + E Sbjct: 181 LRYLEAC-GAKLTFPANGYKSEAYIFDIAKALKTEHGDTMFVSTEDVFTNLPPDEPQGGD 239 Query: 227 -----------------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGD 269 E V D + +++ IRDDL+ ++++ + SE D Sbjct: 240 KDVYIDTLIERAKTLLGETRYRTVFDAGLNSILADIRDDLREFGVEYEQWYSEQTLE--D 297 Query: 270 PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDG 329 I I L +G +YE L F+ST GDD DR + + +G Sbjct: 298 RGLIDRAIAKLEERGQIYE----------------KEGALWFKSTEFGDDKDRVVRRDNG 341 Query: 330 SYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELV 389 TYFA+D+AY K+ERGFD +I + G+DH GYV R++A A+ +++++V L + Sbjct: 342 QSTYFASDIAYHMEKFERGFDRVIDIWGADHHGYVPRVKAALTALGFDESRLDVSLVQFA 401 Query: 390 RLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 LYR G ++MS R+G F+TLR + EVG+++ RF + R ++ LDFD K QS +N Sbjct: 402 ILYRGGERVQMSTRSGSFVTLRELRQEVGNEAARFFYVMRAAAQHLDFDLDLAKSQSNDN 461 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 P++Y+QYA+AR S+FRQ D + ++ E L L+++ + Sbjct: 462 PLYYIQYAHARVCSVFRQLPLRGFTHDAENGRSA---YARLTESHEQALFKRLSQFGDTV 518 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 + A + EP+ + YL +LA FH +++ F+ A++ L RL L+ A + Sbjct: 519 QRAAVNLEPHLIVHYLRELAQDFHAYYNAHA------FLVADDAPLRDARLNLIAATRQV 572 Query: 570 INSGLNIIGVESPNEM 585 + +GL ++G+ +P EM Sbjct: 573 LANGLALLGMSAPEEM 588 >gi|220904017|ref|YP_002479329.1| arginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|254782958|sp|B8IYS4|SYR_DESDA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|219868316|gb|ACL48651.1| arginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 550 Score = 536 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 200/579 (34%), Positives = 319/579 (55%), Gaps = 35/579 (6%) Query: 9 SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68 L+ L I + + + VIE PRD HG LS N+AM+L+R +P +A+ Sbjct: 5 ETLRTALAAIIEEEGL--AWPSKTVIEPPRDPRHGDLSVNSAMLLAREAKTNPRELAQKF 62 Query: 69 VARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEF 127 AR+ + PDV+ AG GF N+ S ++ R+ ++ I +G YG + G +V +E+ Sbjct: 63 AARLLERCPDVEKAEAAGPGFCNVTFSQAFWRQTVTDIESAGQAYGESRE-PGRRVLLEY 121 Query: 128 VSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQ 187 VSANPTGP+HVGH R A VGD+LA L+ +G+ V EYYINDAG Q+ L LSV+ R + Sbjct: 122 VSANPTGPLHVGHGRGAAVGDSLARLLRKAGHHVHTEYYINDAGRQMRLLGLSVWLRVLE 181 Query: 188 ALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRD 247 L + PE YY G Y+ + +E+ + L + P + + + ++ ++ I+D Sbjct: 182 -LAGRPVEWPEDYYRGDYIIDIAREML-TANPALPDMPAPEGEDLCYEKAMTDILNGIKD 239 Query: 248 DLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRK 307 DL+ ++H + SE + + L + GY YE Sbjct: 240 DLRDFRVEHLRWFSEKTLV--ETGAVDAAFAALGKSGYTYE----------------QDN 281 Query: 308 QLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRL 367 F + +GDD +R L KSDGS TYFA+D+AY K+ERG+D +I V G+DH GY+ R+ Sbjct: 282 AFWFATEQLGDDKNRVLKKSDGSLTYFASDIAYHHDKFERGYDWLIDVWGADHHGYIPRM 341 Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 A A+ +++ +V+L +LV L R+G P+ MS RAG F TL V+ EVG+D+ RFM L Sbjct: 342 RAAITAMGKERDSFDVVLIQLVNLLREGQPVSMSTRAGTFETLADVIKEVGTDAARFMFL 401 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487 RK+ LDFD K++S +NPV+YVQYA+AR ++ R+A + F L ++ Sbjct: 402 SRKSDSPLDFDLELAKQRSLDNPVYYVQYAHARICAVLRRAAERG----FVLPEKSDAAL 457 Query: 488 ESEFDTSE-LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 + DT+E + L+ A + ++ A + + ++ YL +LA + H +++ + Sbjct: 458 LAPLDTAEDMTLLRKAAAFEDMLFAAAQSLGVHHVSHYLTELAGLLHSYYARHQ------ 511 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A++ T+ RL L+ +V ++ +GL+++GV +P M Sbjct: 512 VLLADDAPRTLARLALLRSVGQVVRNGLDVLGVSAPESM 550 >gi|254207373|ref|ZP_04913724.1| arginyl-tRNA synthetase [Burkholderia mallei JHU] gi|147752915|gb|EDK59981.1| arginyl-tRNA synthetase [Burkholderia mallei JHU] Length = 578 Score = 535 bits (1379), Expect = e-150, Method: Composition-based stats. Identities = 195/591 (32%), Positives = 307/591 (51%), Gaps = 62/591 (10%) Query: 28 ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----VDSVFI 83 +L I +ERP+ AHG ++ N A+ L++PLG +P +AE IVA + P+ VD+ I Sbjct: 17 VLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQLAEQIVAALTAQPEAAGLVDAAEI 76 Query: 84 AGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRC 143 AG GFINL L+P+ + ++ +++ G +G + +V +EFVSANPTGP+HVGH R Sbjct: 77 AGPGFINLRLTPASKQAVIGAVLAQGRAFGASERDHDKRVLLEFVSANPTGPLHVGHGRQ 136 Query: 144 AVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPG 203 A +GD LA+++A GY V RE+Y NDAG QI LA+S R + L D+ PE Y G Sbjct: 137 AALGDALANVLASQGYAVHREFYYNDAGVQIGNLAISTQARAR-GLKPGDAGWPEAAYNG 195 Query: 204 VYLKHVGKEL------ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHD 257 Y+ + ++ A + + + L ++ ++V + + DLKA ++ D Sbjct: 196 EYIADIARDYLNGETVAASDGEPVTGKRDVEDLEAIRKFAVTYLRREQDMDLKAFGVKFD 255 Query: 258 IFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG 317 + E + + +D L G YE L R+T G Sbjct: 256 QYYLESSLYT--EGRVEKTVDALIAAGMTYE----------------QEGALWLRTTDEG 297 Query: 318 DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV--S 375 DD DR + K+DG+YTYF D+AY K+ERGF +I + GSDH G + R+ A + Sbjct: 298 DDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVINIQGSDHHGTIARVRAGLQGLHIG 357 Query: 376 EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE------------------- 416 K + +L ++V + RDG +K+SKRAG ++T+R +++ Sbjct: 358 IPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVRDLIEWSGGATPGSEGSPELLDEAT 417 Query: 417 --VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 G D+VRF ++ RK FD +Q+ ENPV+YVQYA+AR S+ + K + Sbjct: 418 ITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVYYVQYAHARICSVINEWKSRYGA 477 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 D L ++ P +S+ + L+ LAEYP V+ +A P+ +AFYL +LAS FH Sbjct: 478 TDALLPGADLSPLDSK---QAMALMQKLAEYPDVLAHAAGELAPHAVAFYLRELASEFHS 534 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ R V + + R+ L+ A ++ +GL ++GV +P++M Sbjct: 535 FYNAER-------VLVDEQAPRTARVALLAATRQVLENGLAMLGVSAPSKM 578 >gi|119715977|ref|YP_922942.1| arginyl-tRNA synthetase [Nocardioides sp. JS614] gi|119536638|gb|ABL81255.1| arginyl-tRNA synthetase [Nocardioides sp. JS614] Length = 522 Score = 535 bits (1379), Expect = e-150, Method: Composition-based stats. Identities = 191/554 (34%), Positives = 304/554 (54%), Gaps = 34/554 (6%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLY 92 +ERPR HG +TN A+ L + G++P +A L+ R++ + V IAG GF+N+ Sbjct: 2 TVERPRSKEHGDYATNVALQLGKKAGMNPRDLATLVQQRLEQTDGIAGVDIAGPGFLNIT 61 Query: 93 LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152 ++ + + IV +G YG + +G +VN+EF+SANPTGP+H+GH R AVVGD ++ Sbjct: 62 VAAGAQGIVAAEIVDAGAAYGHTDVLRGERVNVEFISANPTGPLHLGHTRWAVVGDAISR 121 Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212 ++ G VTRE+YIND G Q++ S+ P+ Y G Y+ + ++ Sbjct: 122 VLEAGGATVTREFYINDRGNQMDLFGASIEAAALGK------PTPDDGYHGGYIADLARQ 175 Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 + + +L P+E+ L ++ + ++ L N D++ SE H D Sbjct: 176 IVAE-DPAILELPDEERLVAFREQGYALQLAQQQEQLARFNTVFDVWFSERSLH--DSDD 232 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + +D L QG++YE D L R+T GDD DR L++S+G T Sbjct: 233 VAAGLDKLRAQGHLYE----------------DDGALWMRTTDFGDDKDRVLIRSNGELT 276 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRL 391 YFA+D AY+ K ERGFD IY++G+DH GYV RL+A+AA + + I VL+ +LV++ Sbjct: 277 YFASDTAYYVNKRERGFDRCIYLLGADHHGYVGRLKAMAACAGDDPERNIEVLIGQLVKI 336 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 R G +++SKRAG+ ++L ++DE+G+D++R+ + L D ++ +QS ENPV Sbjct: 337 VRGGEEVRLSKRAGEIVSLEELIDEIGTDALRYSLARYPADSPLTLDIAEITKQSSENPV 396 Query: 452 FYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIEN 511 FYVQYA+AR SI R A+D+ F ++ E +L+ LAE+PRV+ Sbjct: 397 FYVQYAHARIASILRNAEDLGIAWSTGDFDPALLSH-----PKEGELLRALAEFPRVVAA 451 Query: 512 ATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIIN 571 A +EP+++A YL D+A V+H + + R P L RL LV A +++ Sbjct: 452 AAELREPHRVARYLEDMAGVYHRFYDNCRVLPMG---DEQAGDLHRARLVLVAATRTVLA 508 Query: 572 SGLNIIGVESPNEM 585 +GL+++GV +P M Sbjct: 509 NGLDLVGVSAPERM 522 >gi|39932124|sp|Q7W0K0|SYR_BORPE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS Length = 560 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 184/589 (31%), Positives = 302/589 (51%), Gaps = 49/589 (8%) Query: 10 RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69 +L + ++ + E + ++ +ERP+ AHG ++TN AM L++P +P +A+ IV Sbjct: 8 QLISLIQAAVAQCLPEAQ--AQVQLERPKVAAHGDIATNVAMQLAKPARRNPRELAQGIV 65 Query: 70 ARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 + P + IAG GFIN L+P+ + ++ ++ YGR G KV + Sbjct: 66 DALMAQPQARELIQDAEIAGPGFINFRLTPAARQAVVQAVASQADAYGR-APRNGEKVLV 124 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+HVGH R A +GD + L SG++VTRE+Y NDAG QI+ LA+SV R Sbjct: 125 EFVSANPTGPLHVGHARQAALGDAICRLYDASGWDVTREFYYNDAGNQIDNLAISVQAR- 183 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADK------YSSELLNFPEEKWLPIVKDYSVQ 239 + + + D P Y G Y+ + ++ A + + + L ++ ++V Sbjct: 184 GRGIAPDAPDYPADGYKGDYIVEIARDFAARKSVQASDGQPVTATGDLDSLDDIRAFAVA 243 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 + + DL+A + D + E + +++ +D L +G+ YE Sbjct: 244 YLRREQDLDLQAFGLAFDNYFLESSLYA--SGRVQETVDTLVAKGHTYE----------- 290 Query: 300 QKCDMDRKQLLFRSTMVG--DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 + L R+T +G DD DR + KS+G YTYF D+AY K K+ERGF + + + G Sbjct: 291 -----EGGALWLRTTELGTGDDKDRVMRKSEGGYTYFVPDVAYHKVKWERGFHHAVNIQG 345 Query: 358 SDHSGYVKRLEAVAAAV-SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 SDH G V R+ A + K +L ++V++ R G +K+SKRAG ++T+R ++D Sbjct: 346 SDHHGTVARVRAGLQGLAGIPKDFPAYVLHKMVKVMRGGEEVKISKRAGSYVTMRDLIDW 405 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG D+VR+ ++ R+ FD +S ENPV+Y+QYA+AR ++ + ++ Sbjct: 406 VGRDAVRYFLIQRRADTEFVFDIDLALSKSDENPVYYIQYAHARICTMIGNSGASAAEI- 464 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 SE L+ LAE+P+V+ A P+ +AF+L D AS FH + Sbjct: 465 ------AQADTALLTAPSEYALLQRLAEFPQVVALAAQELAPHHVAFWLRDCASDFHAWY 518 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R V + L + RL+L ++ +GL ++GV +P+ M Sbjct: 519 NAER-------VLVDEPALKLARLRLAATTRQVLANGLALLGVSAPDRM 560 >gi|331695512|ref|YP_004331751.1| Arginyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190] gi|326950201|gb|AEA23898.1| Arginyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190] Length = 547 Score = 535 bits (1378), Expect = e-149, Method: Composition-based stats. Identities = 188/575 (32%), Positives = 285/575 (49%), Gaps = 42/575 (7%) Query: 13 NYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI 72 L + + + D + +ERPR+ HG +TN A+ ++ G++P +A + + Sbjct: 13 AALDVLADRGLDAAALPDDVGVERPRNPEHGDYATNVALRTAKKAGVNPRDLATWLAEAL 72 Query: 73 KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANP 132 + S IAG GFINL L+ ++ ++ +G YG G VN+EFVSANP Sbjct: 73 AARDGIASAEIAGPGFINLRLASDAQGAMVGQVLAAGAAYGTGDELAGRSVNLEFVSANP 132 Query: 133 TGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNN 192 TGP+H+G R A VGD L +++ G VTREYY NDAG QI+ S+ + Sbjct: 133 TGPLHLGGTRWAAVGDALGRILSARGAAVTREYYFNDAGGQIDRFVASLVAAAK------ 186 Query: 193 DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252 PE Y G Y+ + + ++E + + + V M I+ DL Sbjct: 187 GEPAPENGYGGAYIADIAARVV---AAEPGALDSPERDEVFRRVGVGFMFDEIKSDLHDF 243 Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312 D++ ED H+ + + L G +YE R Sbjct: 244 GTDFDVWFHEDSLHK--SGAVERSVQELKNSGALYE----------------KDGAWWLR 285 Query: 313 STMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAA 372 ST GDD DR ++KSDG Y A D+AYF+ K RGFD +IY++G+DH GY+ RL+A AA Sbjct: 286 STEHGDDKDRVVIKSDGRPAYIAGDIAYFRDKRARGFDLLIYMLGADHHGYIGRLKAAAA 345 Query: 373 AVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 A + A + VL+ ++V L +DG P++MSKRAG +T+ +V+ VG D+ R+ ++ Sbjct: 346 AFGDDPAVVEVLIGQMVNLVKDGTPVRMSKRAGTVVTMNDLVEAVGVDAARYSLIRSSVD 405 Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF--PDLDFDLFPRNVIPQESE 490 +LD D + +S +NPVFYVQYA+AR S+ R A D+ P ++F L Sbjct: 406 SVLDVDLDLLVRRSNDNPVFYVQYAHARLASLARNAADVGLTPGVEFGLLE--------- 456 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550 E LI + E+P V+ A +EP+++A YL LAS +H + R P Sbjct: 457 -HPREGDLIRTIGEFPEVVRAAAELREPHRVARYLESLASAYHKFYDACRVLP---LGDE 512 Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +L RL L A ++ +GL ++GV +P M Sbjct: 513 EITELHRARLALCVAARQVLANGLELLGVSAPERM 547 >gi|33598837|ref|NP_886480.1| arginyl-tRNA synthetase [Bordetella parapertussis 12822] gi|39932125|sp|Q7W2Q2|SYR_BORPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|33574967|emb|CAE39631.1| arginyl-tRNA synthetase [Bordetella parapertussis] Length = 561 Score = 535 bits (1378), Expect = e-149, Method: Composition-based stats. Identities = 184/590 (31%), Positives = 302/590 (51%), Gaps = 50/590 (8%) Query: 10 RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69 +L + ++ + E + ++ +ERP+ AHG ++TN AM L++P +P +A+ IV Sbjct: 8 QLISLIQAAVAQCLPEAQ--AQVQLERPKVAAHGDIATNVAMQLAKPARRNPRELAQGIV 65 Query: 70 ARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 + P + IAG GFIN L+P+ + ++ ++ YGR G KV + Sbjct: 66 DALMAQPQARELIQDAEIAGPGFINFRLTPAARQAVVQAVASQADAYGR-APRNGEKVLV 124 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+HVGH R A +GD + L SG++VTRE+Y NDAG QI+ LA+SV R Sbjct: 125 EFVSANPTGPLHVGHARQAALGDAICRLYDASGWDVTREFYYNDAGNQIDNLAISVQAR- 183 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADK------YSSELLNFPEEKWLPIVKDYSVQ 239 + + + D P Y G Y+ + ++ A + + + L ++ ++V Sbjct: 184 GRGIAPDAPDYPTDGYKGDYIVEIARDFAARKSVQASDGQPVTATGDLDSLDDIRAFAVA 243 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 + + DL+A + D + E + +++ +D L +G+ YE Sbjct: 244 YLRREQDLDLQAFGLAFDNYFLESSLYA--SGRVQETVDTLVAKGHTYE----------- 290 Query: 300 QKCDMDRKQLLFRSTMVG--DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 + L R+T +G DD DR + KS+G YTYF D+AY K K+ERGF + + + G Sbjct: 291 -----EGGALWLRTTELGTGDDKDRVMRKSEGGYTYFVPDVAYHKVKWERGFHHAVNIQG 345 Query: 358 SDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 SDH G V R+ A + K +L ++V++ R G +K+SKRAG ++T+R ++D Sbjct: 346 SDHHGTVARVRAGLQGLEAGIPKDFPAYVLHKMVKVMRGGEEVKISKRAGSYVTMRDLID 405 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 VG D+VR+ ++ R+ FD +S ENPV+Y+QYA+AR ++ + ++ Sbjct: 406 WVGRDAVRYFLIQRRADTEFVFDIDLALSKSDENPVYYIQYAHARICTMIGNSGASAAEI 465 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 SE L+ LAE+P+V+ A P+ +AF+L D AS FH Sbjct: 466 -------AQADTALLTAPSEYALLQRLAEFPQVVALAAQELAPHHVAFWLRDCASDFHAW 518 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ R V + L + RL+L ++ +GL ++GV +P+ M Sbjct: 519 YNAER-------VLVDEPALKLARLRLAATTRQVLANGLALLGVSAPDRM 561 >gi|320354044|ref|YP_004195383.1| arginyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032] gi|320122546|gb|ADW18092.1| arginyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032] Length = 549 Score = 534 bits (1377), Expect = e-149, Method: Composition-based stats. Identities = 190/583 (32%), Positives = 292/583 (50%), Gaps = 39/583 (6%) Query: 7 FSSRLKNYL----KEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 S +K + E + + R +E P+ G STN A++ + P Sbjct: 2 IKSHVKEIVDRCFTEGVKQGYWSEAAGGRYTVEVPKREGQGDFSTNFALVAAGIDKRKPR 61 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +A + ++ V +AG GFINL+L +L+ I +GR+ G + Sbjct: 62 DLAAQFAELLGGQSMIERVEVAGPGFINLFLDKKIWVTVLAPIYEQDAHFGRSTNGADRR 121 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V +EFVSANPTGP+ VGH R AV+GDT+A L+ SGY V REYY NDAG Q+ L S Sbjct: 122 VLVEFVSANPTGPLSVGHGRNAVLGDTIARLLTASGYAVQREYYFNDAGRQMRVLGESTR 181 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 RY + L ++ PE Y G Y+ + + + D+ + L + K+ + +A+ Sbjct: 182 ARYLELLGLANT-FPEDGYQGDYIYDIARAMIDEAGDGFKD----AELAVFKERAQRAIF 236 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 I LK + I D + +E + + + +++ L + VYE Sbjct: 237 ADIDATLKRIGIGFDTYFNEHTLY--EDGRVNQVVEELRAKNLVYE-------------- 280 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 F++T G + DR ++KS G TY D+AY K++RG+D MI V GSDH Sbjct: 281 --KEGATWFKTTEFGQEQDRVIIKSSGEPTYRLPDIAYHCDKFKRGYDWMINVFGSDHIA 338 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 V + A A+ ++I V+L + V L RDG +KMS R F+T+ +VDEVG D++ Sbjct: 339 TVPDVLAGVRALGHDDSRITVVLYQFVTLLRDGKQVKMSTRKATFVTVDELVDEVGPDAL 398 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 RF L RK L++FD K+QS+ENPV+YVQYA+AR SI RQA++ ++ Sbjct: 399 RFFFLMRKPDNLIEFDLDLAKKQSQENPVYYVQYAHARLCSIERQAREQGVNVG-----T 453 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 + E L+ LAEYP+++ A P+++ FYL DLA FHG ++ + Sbjct: 454 PDQILARLAEPEEYGLLKTLAEYPQLVAGAAADLAPHRVVFYLMDLAGQFHGFYNKHK-- 511 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V ++ +L+ RL L A+ + +GL +IG+ +P M Sbjct: 512 -----VLGDDPELSRARLYLCGALKRVFRNGLTLIGLRAPETM 549 >gi|295099684|emb|CBK88773.1| arginyl-tRNA synthetase [Eubacterium cylindroides T2-87] Length = 544 Score = 534 bits (1377), Expect = e-149, Method: Composition-based stats. Identities = 210/576 (36%), Positives = 311/576 (53%), Gaps = 38/576 (6%) Query: 10 RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69 LK +KE K + + IVIE P+ HG STN AM L+R L +P IAE IV Sbjct: 7 ELKQAIKEAVKKAFDIELEENNIVIETPKVKDHGDFSTNVAMQLTRQLRQNPRMIAEKIV 66 Query: 70 ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129 A I+ +V+ + IAG GFIN LS K++ ++ +G+ G KVN+E+VS Sbjct: 67 ANIE-SENVEKMDIAGPGFINFILSKGRFTKVIEEVLSKRENFGQQ-PSNGIKVNLEYVS 124 Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189 ANPTG +H+GH R A GD+ A +M +GY+VTREYY+NDAG QI LALS+ RY+QA Sbjct: 125 ANPTGSLHLGHARGAAWGDSCARIMKKAGYDVTREYYVNDAGNQITNLALSLNARYRQA- 183 Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249 + ++++ + Y G +K ++LA Y + L P E+ L + ++ + I+ DL Sbjct: 184 HGIETEIGQDGYLGEDVKQKAEQLAKDYPEKYLE-PTEENLKFFRKEGIKFELDKIKADL 242 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 + D++ SE D + + L +GY YE L Sbjct: 243 DNYRVHFDVWSSEQTI--RDSGDVDRALKVLDEKGYTYES----------------EGAL 284 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369 F++T +GDD DR L K+DGSYTY D+AY KY+RG+D ++ +G+DH GY+ RL+A Sbjct: 285 WFKTTELGDDKDRVLRKTDGSYTYLVPDIAYHNDKYKRGYDLLVDFLGADHHGYIPRLKA 344 Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429 A+ ++NV + ++VRL DG +KMSKR G+ T+ + D VG D+ R+ + R Sbjct: 345 SMQALGNDPDKLNVDIIQMVRLVSDGKEVKMSKRLGNATTINELCDSVGVDAARYFFVQR 404 Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489 LDFD K QS +NPV+Y QYA+AR SI +QAKDI F E Sbjct: 405 ALDSHLDFDIELAKRQSNDNPVYYAQYAHARMCSIQKQAKDIELADSF----------ED 454 Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549 D E++L+ L E+ +VI + ++ +K+ Y+ LAS FH ++ + + Sbjct: 455 LTDEKEIELMKTLQEFNKVIIESAKTRQVHKVCHYIQTLASKFHSFYNAC------KVID 508 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +N KL+ RL LV A ++ + L +GVE+ M Sbjct: 509 RDNMKLSSQRLALVKATQIVLANALETVGVEAVESM 544 >gi|33603912|ref|NP_891472.1| arginyl-tRNA synthetase [Bordetella bronchiseptica RB50] gi|39932133|sp|Q7WDQ0|SYR_BORBR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|33568888|emb|CAE35302.1| arginyl-tRNA synthetase [Bordetella bronchiseptica RB50] Length = 561 Score = 534 bits (1376), Expect = e-149, Method: Composition-based stats. Identities = 184/590 (31%), Positives = 302/590 (51%), Gaps = 50/590 (8%) Query: 10 RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69 +L + ++ + E + ++ +ERP+ AHG ++TN AM L++P +P +A+ IV Sbjct: 8 QLISLIQAAVAQCLPEAQ--AQVQLERPKVAAHGDIATNVAMQLAKPARRNPRELAQGIV 65 Query: 70 ARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 + P + IAG GFIN L+P+ + ++ ++ YGR G KV + Sbjct: 66 DALMAQPQARELIQDAEIAGPGFINFRLTPAARQAVVQAVASQADAYGR-APRNGEKVLV 124 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+HVGH R A +GD + L SG++VTRE+Y NDAG QI+ LA+SV R Sbjct: 125 EFVSANPTGPLHVGHARQAALGDAICRLYDASGWDVTREFYYNDAGNQIDNLAISVQAR- 183 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADK------YSSELLNFPEEKWLPIVKDYSVQ 239 + + + D P Y G Y+ + ++ A + + + L ++ ++V Sbjct: 184 GRGIAPDAPDYPADGYKGDYIVEIARDFAARKSVQASDGQPVTATGDLDSLDDIRAFAVA 243 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 + + DL+A + D + E + +++ +D L +G+ YE Sbjct: 244 YLRREQDLDLQAFGLAFDNYFLESSLYA--SGRVQETVDTLVAKGHTYE----------- 290 Query: 300 QKCDMDRKQLLFRSTMVG--DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 + L R+T +G DD DR + KS+G YTYF D+AY K K+ERGF + + + G Sbjct: 291 -----EGGALWLRTTELGTGDDKDRVMRKSEGGYTYFVPDVAYHKVKWERGFHHAVNIQG 345 Query: 358 SDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 SDH G V R+ A + K +L ++V++ R G +K+SKRAG ++T+R ++D Sbjct: 346 SDHHGTVARVRAGLQGLEAGIPKDFPAYVLHKMVKVMRGGEEVKISKRAGSYVTMRDLID 405 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 VG D+VR+ ++ R+ FD +S ENPV+Y+QYA+AR ++ + ++ Sbjct: 406 WVGRDAVRYFLIQRRADTEFVFDIDLALSKSDENPVYYIQYAHARICTMIGNSGASAAEI 465 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 SE L+ LAE+P+V+ A P+ +AF+L D AS FH Sbjct: 466 -------AQADTALLTAPSEYALLQRLAEFPQVVALAAQELAPHHVAFWLRDCASDFHAW 518 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ R V + L + RL+L ++ +GL ++GV +P+ M Sbjct: 519 YNAER-------VLVDEPALKLARLRLAATTRQVLANGLALLGVSAPDRM 561 >gi|291302994|ref|YP_003514272.1| arginyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728] gi|290572214|gb|ADD45179.1| arginyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728] Length = 550 Score = 534 bits (1376), Expect = e-149, Method: Composition-based stats. Identities = 183/581 (31%), Positives = 290/581 (49%), Gaps = 38/581 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRI-VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 + ++ + + ++ +L + +ERPR HG S+N ++ +++ G P +A Sbjct: 6 LAEKVLSAARAAFDAAGLDTGVLPQTATVERPRVAEHGDYSSNISLQVAKKAGKPPRELA 65 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 E I A ++ + +V IAG GF+N+ L + + I+ +G YG N G K+N+ Sbjct: 66 EAIAANLRAVEGIAAVDIAGPGFLNIKLDAAATGAVAGKIIEAGDTYGHNDSLNGQKLNL 125 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+H+G R A VGD L +++ SG EVT EYY+NDAG Q++ S+ Sbjct: 126 EFVSANPTGPIHIGSVRWAAVGDALGRVISASGAEVTTEYYVNDAGVQMDLFGASLLAAA 185 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245 + +P Y G Y+K + K++ L + + + + M+ I Sbjct: 186 K------GEPVPADGYQGDYVKDIAKQIVADRPELLTSDDPRQG---FRQAGLDLMLAEI 236 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 + L + D++ SE H G I + L G +E Sbjct: 237 KRSLADFGVHFDVYFSEKQLHDG--GDIDAAVAKLTELGATFES---------------- 278 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365 L R+T GDD DR L K DG++TYFAAD AY++ K +RGFD ++Y++G+DH GY+ Sbjct: 279 EGALWLRTTDHGDDKDRVLRKEDGTWTYFAADAAYYRDKRQRGFDPLVYMLGADHHGYIG 338 Query: 366 RLEAVAAAVSEKK-AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 R++A++A + A I +L+ +LV L +DG P++MSKRAG TL V +GSD+ R+ Sbjct: 339 RMKALSACFGDDPNATIEILIGQLVNLKKDGQPLRMSKRAGTITTLDEFVAALGSDAGRY 398 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 + + +D D S +NPV+YVQYA+AR S+ R A ++ P+ Sbjct: 399 ALARYSSDSTIDLDLDLWTSASNDNPVYYVQYAHARIASLLRNAGELGLSRGESYDPK-- 456 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 E L+ LA +P+V+ A +EP+++A Y DLA +H + R PR Sbjct: 457 ----LLDHPRESDLLKQLAGFPKVVATAAELREPHRVARYAEDLAGAYHRFYDACRVLPR 512 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL LV A ++ + L ++GV +P M Sbjct: 513 G---DEEFTDTGAARLWLVEATRVVLANALRLLGVSAPERM 550 >gi|114321921|ref|YP_743604.1| arginyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1] gi|114228315|gb|ABI58114.1| arginyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1] Length = 611 Score = 534 bits (1376), Expect = e-149, Method: Composition-based stats. Identities = 200/615 (32%), Positives = 305/615 (49%), Gaps = 61/615 (9%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + L+ + + + + I +ER RD AHG + N AM+L+R P Sbjct: 26 MKKHIAHCLQQAVSRLCEQGFLPPDTEVDIQVERARDRAHGDYAANTAMMLARAARRKPR 85 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 IA+ +V + +D IAG GFIN L+P + + +YGR+ +G G + Sbjct: 86 EIAQALVGALPGSEYIDRAEIAGPGFINFILTPQAAWAPVRQALSQAGDYGRSDLGAGRR 145 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V +EFVSANPTGP+HVGH R A G LA L+A +GY+V REYY+NDAG Q++ LA SV+ Sbjct: 146 VMVEFVSANPTGPLHVGHGRGAAFGAALADLLAAAGYDVYREYYVNDAGRQMDILAASVW 205 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE---------------- 226 RY +A P+ Y G Y++ + LA++ L + + Sbjct: 206 LRYLEAC-GEPVRFPDNGYRGDYVREIATGLAEQVGDALRHPADRVMADLPPDAAQGGDR 264 Query: 227 ----------------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 E V + + ++ IRDDL+ + + + SE + Sbjct: 265 EQHIDALVRRARALLGEAGYRQVFEQGLNGILADIRDDLEGFGVTYQNWYSERSL--TES 322 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + + L G+ Y+ L FRS+ GDD DR L + +G Sbjct: 323 GQVERALARLTEAGHTYQ----------------QDGALWFRSSAFGDDKDRVLRRENGQ 366 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFA+D+AY K +RGFD ++ V G+DH GYV R+ A AA E + +++V L + Sbjct: 367 TTYFASDVAYHLDKLQRGFDQLVDVWGADHHGYVPRVRAALAAFGEDEQRLSVRLVQFAI 426 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 LYR ++MS R+G+F+TLR + EVG D+ RF + RK + +DFD K +S +NP Sbjct: 427 LYRGQERLQMSTRSGEFVTLRQLRAEVGDDAARFFYVMRKPEQHMDFDLELAKSESSDNP 486 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+Y+QYA+AR S+FRQ + D R + + + E L+ L YP VIE Sbjct: 487 VYYLQYAHARICSVFRQLDEKGLVWDR---ARGLDALDRLGEDHEQALVTELGRYPEVIE 543 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A A EP+++A YL DLA+ H +++ + + L RL LV A ++ Sbjct: 544 SAAQAHEPHQVAAYLRDLANALHTYYNAHQF-------IVEDAALRDARLCLVAATRQVL 596 Query: 571 NSGLNIIGVESPNEM 585 +GL ++GV +P M Sbjct: 597 RNGLELLGVRAPERM 611 >gi|289671095|ref|ZP_06492170.1| arginyl-tRNA synthetase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 566 Score = 534 bits (1376), Expect = e-149, Method: Composition-based stats. Identities = 193/595 (32%), Positives = 309/595 (51%), Gaps = 41/595 (6%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 + A + + ++ + + L V+ERP+ HG +TNAAM+L++ +P Sbjct: 1 MKALLRALIGQGIEALRANGTLPADTLPPDFVVERPKTREHGDFATNAAMLLAKAARSNP 60 Query: 62 L----TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117 +A+ ++A + DV V IAG GFIN +L+P+ ++ ++ ++ G +YGR L Sbjct: 61 RSNPRVLAQALLAALPASDDVAKVDIAGPGFINFHLAPTAYQREVAHVIKQGHDYGRGLA 120 Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 G G V +E+VSANPTGP+HVGH R A +GD+LA ++ +G+ V RE+Y NDAG QI L Sbjct: 121 GNGRSVGVEYVSANPTGPLHVGHGRAAAIGDSLARVLDANGWNVKREFYYNDAGVQIENL 180 Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPI 232 ALSV R Q L + + PE Y G Y+ V D + + L Sbjct: 181 ALSVQAR-AQGLTPDSAGWPENGYRGDYIADVANAYLAGDTVDLEGHLVTGTKDPADLES 239 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + DL A + DI+ E ++ + + + L G+ YE Sbjct: 240 IRRFAVAYLRNEQNHDLAAFRVDFDIYFLESSLYK--DGKVEEAVQQLIASGHTYE---- 293 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 + L +ST GDD DR + KSDG+YTYF D+AY K++RG++ Sbjct: 294 ------------EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGYERA 341 Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 I +G+DH G + R+ A A+ + +L ++V + R G +K+SKRAG ++TL Sbjct: 342 ITELGADHHGSLTRVRAGLQAMELGIPQGWPEYVLHQMVTVMRGGEEVKLSKRAGSYVTL 401 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R +++E +D+VR+ ++ RK L FD + QS +NPVFYVQYA+AR S+ RQA++ Sbjct: 402 RDLIEETSADAVRWFLIARKPDSQLTFDIDLARAQSNDNPVFYVQYAHARVCSVLRQAQE 461 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 D + D L +++ L+ YP V+E A A EPY++A YL +LA Sbjct: 462 KGYKYDQ---THGLAELAHLDDEHSLAVMLELSRYPEVVEIAGQALEPYQIAQYLRELAH 518 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 FH + + + V ++ +L L A ++ +GL ++GV +P +M Sbjct: 519 AFHTWYHNSK-------VLVDDAAERDAKLTLAVATQQVLANGLELLGVSAPEKM 566 >gi|291530393|emb|CBK95978.1| arginyl-tRNA synthetase [Eubacterium siraeum 70/3] Length = 584 Score = 534 bits (1375), Expect = e-149, Method: Composition-based stats. Identities = 188/604 (31%), Positives = 306/604 (50%), Gaps = 54/604 (8%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 + N L + + K+E L +ERP D +HG S NAAM ++ L +P I Sbjct: 11 QVKETVMNALGRLVAEGKIEAVPLPAFNVERPADVSHGDFSCNAAMASAKALRNNPRAIG 70 Query: 66 ELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 ++I +D + + +AG GF+N ++SP + + + ++ SG +YG+ +GKG +V Sbjct: 71 QMIADAAVLDGTVFEKIEVAGPGFLNFFISPLWFNETVGEVISSGSDYGKTELGKGKRVL 130 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGPMH+G+ R +GD+L+S++ F+GYEV RE+Y+NDAG QI S+ R Sbjct: 131 VEFVSANPTGPMHIGNARGGALGDSLSSVLQFAGYEVEREFYVNDAGNQIEKFGKSLSIR 190 Query: 185 YQQALYNNDSD----------------------LPEGYYPGVYLKHVGKELADKYSSELL 222 Y Q N SD +PE Y GV + + + Sbjct: 191 YMQIADGNKSDVIASYGDDDVCRKIFEDEENFPMPEDVYKGVDIIEHAYNFYKINGDKFV 250 Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282 N EE + +Y++ + + DL I +D + E H+ ++ I+D L Sbjct: 251 NADEESRKSALVEYALPLNIDGLEKDLAKYRIVYDTWFRESSLHK--SGAVKQIVDMLTE 308 Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342 +G YE + F+++ GDD DR L++++G TYF D+AY Sbjct: 309 KGQTYE----------------KDGAIWFKASDFGDDQDRVLVRANGIPTYFVPDIAYHY 352 Query: 343 CK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401 K RGFD I ++G+DH GY+ R++A A+ +++++++ ++V L R+G +K+S Sbjct: 353 NKLVTRGFDKAIDILGADHHGYIARMKAALTALGVDASKLDIVIMQMVMLVRNGETVKLS 412 Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461 KR+G ITL ++DEV D+ RF R + L+FD E+S NPVFYVQYA+AR Sbjct: 413 KRSGKAITLSTLLDEVPIDAARFFFNLRDPNTHLEFDLELAIEESSNNPVFYVQYAHARI 472 Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 SI R+ ++ + + + + +EL LI H+A P I A P K+ Sbjct: 473 CSILRRMEEEGTG-----YSNIPVSELNFNHPAELALIRHIAALPNCINEAAKDYNPSKI 527 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 YL DLA +FH + + + ++ + RL L A ++ + L+++ V++ Sbjct: 528 TKYLCDLAQLFHKFYDNCK-------IKGEEENILQSRLSLCVATKTVFKNLLDLLKVDA 580 Query: 582 PNEM 585 P +M Sbjct: 581 PEKM 584 >gi|312135721|ref|YP_004003059.1| arginyl-tRNA synthetase [Caldicellulosiruptor owensensis OL] gi|311775772|gb|ADQ05259.1| arginyl-tRNA synthetase [Caldicellulosiruptor owensensis OL] Length = 561 Score = 534 bits (1375), Expect = e-149, Method: Composition-based stats. Identities = 195/592 (32%), Positives = 320/592 (54%), Gaps = 38/592 (6%) Query: 1 MYLFA----DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRP 56 M L ++N +K K E + I+IE+P++ +HG +TN AM L+R Sbjct: 1 MNLVKLAKQQIQDVVQNAIKNCIDKGIFELDSIPEIMIEKPKEKSHGDFATNIAMELTRK 60 Query: 57 LGLDPLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115 +P IA+ I+ I + + V +AG GFIN + +L K++ I+ G YG+ Sbjct: 61 FKKNPREIAQNILDCIDLSGTFIEKVEVAGPGFINFFFRNDWLYKVVEVILSEGNNYGKV 120 Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175 +G G KV +EFVSANPTGPMH+G+ R +GD LA+L+ ++GY VT+E+Y+NDAG QI Sbjct: 121 NVGNGKKVMVEFVSANPTGPMHMGNARGGALGDCLANLLKWAGYNVTKEFYVNDAGNQIE 180 Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235 S+ RY+Q L + +LPE Y G + +E ++Y +L N ++ + + Sbjct: 181 KFGQSLEIRYRQ-LKGENIELPEDCYHGEDIIERVREYLNEYGDDLENLSSDERRKKLVE 239 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 ++++ + ++++ LK I++D++ E + + + + I++L +GY YE Sbjct: 240 FALKRNISLMKEHLKKYGIEYDVWFHESSLY--ESGEVFETIEDLKSRGYTYE------- 290 Query: 296 SKTTQKCDMDRKQLLFRSTMV-GDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMI 353 L F ++ + G+ D L++++G TYFAAD+AY + K+E RGFD +I Sbjct: 291 ---------KDGALWFAASKIDGNLKDEVLIRANGIPTYFAADIAYHRNKFEKRGFDIVI 341 Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 + G+DH G+V R++A A+ ++ V+L +LVRL R ++MSKR G ITL + Sbjct: 342 DIWGADHHGHVARMKAAMKALGIDPERLIVILMQLVRLVRGKEVVRMSKRTGKAITLIDL 401 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 +DE+G D+ RFM + ++ D V +Q+ +NPVFYVQYA+AR I R + Sbjct: 402 IDEIGKDAARFMFNTKSADTHIEIDLDLVTQQTLDNPVFYVQYAHARTCGIIRALSEEGI 461 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 LD N++ QE EF+ + L + IE A + ++ YL DL+++FH Sbjct: 462 VLDRGRIKLNLLQQEEEFELLKKLLELP-----EEIEIAARNFDVSRVTKYLLDLSAIFH 516 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + V+ N L RL LV V +I + L+++GVE+P M Sbjct: 517 SFYNACK-------VKNENEDLMFTRLALVECVRIVIKNMLDLLGVEAPERM 561 >gi|88799634|ref|ZP_01115210.1| arginyl-tRNA synthetase [Reinekea sp. MED297] gi|88777719|gb|EAR08918.1| arginyl-tRNA synthetase [Reinekea sp. MED297] Length = 561 Score = 533 bits (1374), Expect = e-149, Method: Composition-based stats. Identities = 187/590 (31%), Positives = 304/590 (51%), Gaps = 36/590 (6%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + +S L+ ++ + + R++++ RD AHG L++N A++L++P +P Sbjct: 1 MKQQIASLLEAATDQLKSEGFIPADHPIRVMVDNTRDKAHGDLASNLALMLAKPCQSNPR 60 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +AE ++A + + VD V IAG GFIN YL+ +I++ I+ ++G N G+G K Sbjct: 61 AVAEKLIAALPDNQIVDKVEIAGPGFINFYLAGESSAEIVADILNRRAQFGTNDSGQGRK 120 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V +EFVSANPTGP+HVGH R A +GD+L L+ +G++ TRE+Y NDAGAQIN LA+SV Sbjct: 121 VQVEFVSANPTGPLHVGHGRNAALGDSLCRLLEANGWQPTREFYYNDAGAQINNLAISVQ 180 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD-----KYSSELLNFPEEKWLPIVKDYS 237 R + L D P Y G Y+ + + E+ + L + +++ Sbjct: 181 SRI-KGLTPEDDAWPADGYRGEYIIELARSYMKGDQVIADDREVTAKADADDLDAILEFA 239 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 V + DLKA +++ D++ E + + + L G+ YE Sbjct: 240 VAYLRHEQDLDLKAFDVRFDVYSLESSLY--SDGLVEATVKQLVDNGFTYE--------- 288 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 D + ++T GDD DR + K DG YTYF D+AY K K+ERGFD +I V G Sbjct: 289 -------DDGAMWLKTTEFGDDKDRVMRKKDGGYTYFLPDVAYHKAKFERGFDRVINVQG 341 Query: 358 SDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 +DH V R+ A A+ + + L +++ + R G +K+SKRAG ++TLR +++ Sbjct: 342 ADHHSTVTRVRAGLQALKEGIPEGFPDYALYQMIMVMRGGEEVKLSKRAGSYVTLRDLIE 401 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 E G D+ R+ ++ R+ + FD ++ +NPV+Y+QYA+AR + + + Sbjct: 402 EAGRDATRYFLVSRRADAQITFDIDLATSKNNDNPVYYIQYAHARVHGVLNRLAEQNLSY 461 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 D + +E +L+ L YP V+ A A EP +A YL DLA +FH + Sbjct: 462 DE---AAGLAALGKLDLDAERELMTQLRRYPDVVTAAADALEPAMIANYLKDLAGLFHSY 518 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ + + RL L AVA ++ +GLN++GV +P M Sbjct: 519 YNSNK-------MLVEQDDQRNARLVLSKAVAQVLANGLNLLGVSAPESM 561 >gi|308233577|ref|ZP_07664314.1| arginyl-tRNA synthetase [Atopobium vaginae DSM 15829] gi|328943970|ref|ZP_08241435.1| arginine--tRNA ligase [Atopobium vaginae DSM 15829] gi|327491939|gb|EGF23713.1| arginine--tRNA ligase [Atopobium vaginae DSM 15829] Length = 615 Score = 533 bits (1374), Expect = e-149, Method: Composition-based stats. Identities = 194/629 (30%), Positives = 302/629 (48%), Gaps = 68/629 (10%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + + LK+ + ++ IERP D HG S+ A+ +R + P IA+ Sbjct: 5 INDLVLCALKDAQASSDLPDFKIEDACIERPADADHGDWSSTVALRTARLAHMAPAKIAQ 64 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 +IV + + +V+ V IAG GFIN YL + +++ + G +G G G K+N E Sbjct: 65 IIVDHLPENKEVEKVEIAGPGFINFYLKAAASNDVINDVRAQGSRWGSCDDGHGFKINYE 124 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY- 185 F+SANPTGP+HVGH R A +GD++ +++ F GY+V REYYIND G+Q++ SV RY Sbjct: 125 FISANPTGPLHVGHGRWAALGDSICNVLDFCGYDVFREYYINDHGSQMDVFGGSVAMRYV 184 Query: 186 ------------------------QQALYNNDSDLPEGY--------------YPGVYLK 207 ++ + + D PE + Y G Y+ Sbjct: 185 QLCQIMQEKSCDSNKAYELLLQDREEYVLDEDDSHPEKHPFMDAFNEHLGGNSYGGDYII 244 Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 + KE D EEK ++ + QAM+ I+ + D++ SE + Sbjct: 245 EIAKEFYDADGDAWYKVDEEKRCDAFRERAYQAMLSRIKKTCHNVRCDFDLWFSERSLYD 304 Query: 268 GDP---SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 + S + L GY+Y+ D L F+ST GDD DR L Sbjct: 305 KNEQGVSLVDKAFARLDEMGYLYK---------------TDDGALWFKSTAFGDDKDRVL 349 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 +KS+G YTYFA+D+AY K++RG I + GSDH GY+ R+ V A+ K Q V Sbjct: 350 IKSNGDYTYFASDVAYHWNKFDRGAQLSIDLWGSDHHGYIARVTNVCDALGF-KGQFKVD 408 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L + V L R+G P++MSKR G + ++ EVG D+ R+ ++ + +++ +DFD VKE Sbjct: 409 LGQFVNLLRNGEPVRMSKRRGTMVPFDELIAEVGVDATRYTLVSKSSNQTIDFDIEAVKE 468 Query: 445 QSKENPVFYVQYAYARCRSIFRQA----KDIFPDLDFDLFPRNVIPQESEF----DTSEL 496 +S NPVFYVQYA+AR SI R A ++ L D + I + E Sbjct: 469 KSNANPVFYVQYAHARICSILRHAAGVSEEEAKSLGMDAVAQKAIGNACDLSLLVHPMEA 528 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 L L+E+P +I + P+++ + +LA FHG +++ + + +L+ Sbjct: 529 ALTRKLSEFPELISGCARDRAPFRITHFCEELAGAFHGFYANCQVLSSEGRQI--DPELS 586 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL AV + L +IGV +P+ M Sbjct: 587 RARLAACDAVRINLEVALKLIGVSAPDVM 615 >gi|300313639|ref|YP_003777731.1| arginyl-tRNA synthetase [Herbaspirillum seropedicae SmR1] gi|300076424|gb|ADJ65823.1| arginyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1] Length = 577 Score = 533 bits (1374), Expect = e-149, Method: Composition-based stats. Identities = 198/609 (32%), Positives = 305/609 (50%), Gaps = 58/609 (9%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + A R+ + + E + I +ERPRD +HG ++ N AM L++PL +P Sbjct: 1 MLAQQKQRISDLFSSALQPLLAESGLTPTITLERPRDASHGDVACNIAMQLAKPLKKNPR 60 Query: 63 TIAELIVARIKIDPDVD----SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +A+ IVA + DP + SV IAG GFINL ++ + + ++ I G YGR G Sbjct: 61 ELAQAIVAAVMADPAREDLVESVEIAGPGFINLRVAAAAKQAVVKVIHEQGEAYGRGSAG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G KV +EFVSANPTGP+HVGH R +GD L+SL+ GY+V RE+Y NDAG QI TLA Sbjct: 121 AGKKVLVEFVSANPTGPLHVGHGRQGALGDALSSLLEAQGYDVLREFYYNDAGVQIATLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK------YSSELLNFPEEKWLPI 232 SV R + D++ PE Y G Y+ + ++ DK + E + Sbjct: 181 TSVQARAR-GFKPGDAEWPESAYNGDYIADIARDFLDKKTVSASDGEPVTGSGEVDDIES 239 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + DL+A ++ D + E + + +D L G YE Sbjct: 240 IRRFAVAYLRHEQDLDLQAFGVKFDNYYLESSLYA--DGKVAAAVDALIAAGKTYE---- 293 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L R+T GDD DR + K+DG+YTYF D+AY K++RG+ + Sbjct: 294 ------------QDGALWLRTTDYGDDKDRVMKKTDGTYTYFVPDVAYHINKWQRGYGKV 341 Query: 353 IYVMGSDHSGYVKRLEAV--AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 I + GSDH G + R+ A AA V + + +L ++V + R+G +K+SKRAG ++TL Sbjct: 342 INIQGSDHHGTIARVRAGLQAAGVGIPQGYPDYVLHKMVTVMRNGEEVKISKRAGSYVTL 401 Query: 411 RHVVDE--------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456 R +++ G D+VRF ++ RK FD QS ENPV+YVQY Sbjct: 402 RDLIEWSAGEPVEGQERDLTRGRDAVRFFLISRKADTEFVFDVDLALAQSDENPVYYVQY 461 Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 A+AR ++ ++ +D + + E L+ LAEYP ++ +A Sbjct: 462 AHARICTVLGKSG-----VDEEALKSSA-DLSLLTAPREATLLAKLAEYPDMLAHALQEL 515 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 P+++AFYL DLA H +++ R V ++ RL L+ A ++ +GL + Sbjct: 516 GPHQVAFYLRDLAGELHSYYNAER-------VLVDDVPTRSARLALLSATRQVLRNGLAL 568 Query: 577 IGVESPNEM 585 +GV +P M Sbjct: 569 LGVSAPARM 577 >gi|167749948|ref|ZP_02422075.1| hypothetical protein EUBSIR_00916 [Eubacterium siraeum DSM 15702] gi|167657115|gb|EDS01245.1| hypothetical protein EUBSIR_00916 [Eubacterium siraeum DSM 15702] Length = 584 Score = 533 bits (1374), Expect = e-149, Method: Composition-based stats. Identities = 188/604 (31%), Positives = 306/604 (50%), Gaps = 54/604 (8%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 + N L + + K+E L +ERP D +HG S NAAM ++ L +P I Sbjct: 11 QVKETIMNALGRLVAEGKIEAVPLPAFNVERPADVSHGDFSCNAAMASAKALRNNPRAIG 70 Query: 66 ELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 ++I +D + + +AG GF+N ++SP + + + ++ SG +YG+ +GKG +V Sbjct: 71 QMIADAAVLDGTVFEKIEVAGPGFLNFFISPLWFNETVGEVISSGSDYGKTELGKGKRVL 130 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGPMH+G+ R +GD+L+S++ F+GYEV RE+Y+NDAG QI S+ R Sbjct: 131 VEFVSANPTGPMHIGNARGGALGDSLSSVLQFAGYEVEREFYVNDAGNQIEKFGKSLSIR 190 Query: 185 YQQALYNNDSD----------------------LPEGYYPGVYLKHVGKELADKYSSELL 222 Y Q N SD +PE Y GV + + + Sbjct: 191 YMQIADGNKSDVIASYGDDDVCRKIFEDEENFPMPEDVYKGVDIIEHAYNFYKINGDKFV 250 Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282 N EE + +Y++ + + DL I +D + E H+ ++ I+D L Sbjct: 251 NADEESRKSALVEYALPLNIDGLEKDLAKYRIVYDTWFRESSLHK--SGAVKQIVDMLTD 308 Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342 +G YE + F+++ GDD DR L++++G TYF D+AY Sbjct: 309 KGQTYE----------------KDGAIWFKASDFGDDQDRVLVRANGIPTYFVPDIAYHY 352 Query: 343 CK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401 K RGFD I ++G+DH GY+ R++A A+ +++++++ ++V L R+G +K+S Sbjct: 353 NKLVTRGFDKAIDILGADHHGYIARMKAALTALGVDASKLDIVIMQMVMLVRNGETVKLS 412 Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461 KR+G ITL ++DEV D+ RF R + L+FD E+S NPVFYVQYA+AR Sbjct: 413 KRSGKAITLSTLLDEVPIDAARFFFNLRDPNTHLEFDLELAIEESSNNPVFYVQYAHARI 472 Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 SI R+ ++ + + + + +EL LI H+A P I A P K+ Sbjct: 473 CSILRRMEEEGTG-----YSNIPVSELNFNHPAELALIRHIAALPNCINEAAKDYNPSKI 527 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 YL DLA +FH + + + ++ + RL L A ++ + L+++ V++ Sbjct: 528 TKYLCDLAQLFHKFYDNCK-------IKGEEENILQSRLSLCVATKTVFKNLLDLLKVDA 580 Query: 582 PNEM 585 P +M Sbjct: 581 PEKM 584 >gi|291557256|emb|CBL34373.1| arginyl-tRNA synthetase [Eubacterium siraeum V10Sc8a] Length = 584 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 187/604 (30%), Positives = 306/604 (50%), Gaps = 54/604 (8%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 + N L + + K+E L +ERP D +HG S NAAM ++ L +P I Sbjct: 11 QVKETVMNALGRLVAEGKIEAVPLPAFNVERPADVSHGDFSCNAAMASAKALRNNPRAIG 70 Query: 66 ELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 ++I +D + + +AG GF+N ++SP + + + ++ SG +YG+ +GKG +V Sbjct: 71 QMIADAAVLDGTVFEKIEVAGPGFLNFFISPLWFNETVGEVISSGSDYGKTELGKGKRVL 130 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGPMH+G+ R +GD+L+S++ F+GYEV RE+Y+NDAG QI S+ R Sbjct: 131 VEFVSANPTGPMHIGNARGGALGDSLSSVLQFAGYEVEREFYVNDAGNQIEKFGKSLSIR 190 Query: 185 YQQALYNNDSD----------------------LPEGYYPGVYLKHVGKELADKYSSELL 222 Y Q N +D +PE Y GV + + + Sbjct: 191 YMQIADGNKADVIASYGDDDVCRKIFEDEENFPMPEDVYKGVDIIEHAYNFYKINGDKFV 250 Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282 N EE + +Y++ + + DL I +D + E H+ ++ I+D L Sbjct: 251 NADEESRKSALVEYALPLNIDGLEKDLAKYRIVYDTWFRESSLHK--SGAVKQIVDMLTE 308 Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342 +G YE + F+++ GDD DR L++++G TYF D+AY Sbjct: 309 KGQTYE----------------KDGAIWFKASDFGDDQDRVLVRANGIPTYFVPDIAYHY 352 Query: 343 CK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMS 401 K RGFD I ++G+DH GY+ R++A A+ +++++++ ++V L R+G +K+S Sbjct: 353 NKLVTRGFDKAIDILGADHHGYIARMKAALTALGVDASKLDIVIMQMVMLVRNGETVKLS 412 Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461 KR+G ITL ++DEV D+ RF R + L+FD E+S NPVFYVQYA+AR Sbjct: 413 KRSGKAITLSTLLDEVPIDAARFFFNLRDPNTHLEFDLELAIEESSNNPVFYVQYAHARI 472 Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 SI R+ ++ + + + + +EL LI H+A P I A P K+ Sbjct: 473 CSILRRMEEEGTG-----YSNIPVSELNFNHPAELALIRHIAALPNCINEAAKDYNPSKI 527 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVES 581 YL DLA +FH + + + ++ + RL L A ++ + L+++ V++ Sbjct: 528 TKYLCDLAQLFHKFYDNCK-------IKGEEENILQSRLSLCVATKTVFKNLLDLLKVDA 580 Query: 582 PNEM 585 P +M Sbjct: 581 PEKM 584 >gi|167772363|ref|ZP_02444416.1| hypothetical protein ANACOL_03740 [Anaerotruncus colihominis DSM 17241] gi|167665466|gb|EDS09596.1| hypothetical protein ANACOL_03740 [Anaerotruncus colihominis DSM 17241] Length = 564 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 193/584 (33%), Positives = 307/584 (52%), Gaps = 34/584 (5%) Query: 6 DFSSRLKNYLKEIDCKIKVEK-KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 D + L L+ + L V+E P D +HG ++N AM +RP P I Sbjct: 11 DIAVLLDGALERAVESGALPAASELPDFVVEIPADTSHGDFASNIAMACARPFKCAPRKI 70 Query: 65 AELIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 AE I A + + + V IAG GFIN +LSP + ++ S++ +G +YGR G+G KV Sbjct: 71 AEAICAALDLTGTVFERVEIAGPGFINFFLSPRWFADVVKSVLSAGADYGRTDYGRGEKV 130 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EFVSANPTGPMH+G+ R +GD LA+ + +SG+ VTRE+Y+NDAG QI S+ Sbjct: 131 QVEFVSANPTGPMHMGNARGGALGDCLAAALDWSGHNVTREFYVNDAGNQIEKFGCSLEA 190 Query: 184 RYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 RY Q D+ PE Y G ++ ++ AD++ + + D+++ + Sbjct: 191 RYLQIFKGEDAVAFPEDGYHGDDIRERAQQFADQFGDRFVESDSAARRQALVDFALPRNI 250 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 + ++ DL+ I +D++ E + H G I + I L +G YE Sbjct: 251 EKLKADLERYRIHYDVWFRESELHHG---AIDEAIRVLTARGMTYE-------------- 293 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHS 361 L +R+T G + D L++++G TYFAAD+AY K+ RGF+ +I V G+DH Sbjct: 294 --QDGALWYRATENGGEKDEVLVRANGFPTYFAADIAYHYNKFAVRGFERVINVWGADHH 351 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 G+V RL+ A+ +++++L + VRL +DG P+KMSKR G I+L +++EV D+ Sbjct: 352 GHVARLKGAMDAIGLNGDRLDIVLMQFVRLMQDGKPVKMSKRTGKAISLTDLIEEVPVDA 411 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 RF+ R+ + ++DFD EQS +NPV+YVQYA+AR S+ ++ +D + Sbjct: 412 ARFLFNMREPNSMVDFDLDLAVEQSMQNPVYYVQYAHARICSLLKKLEDEGVAPRACTYD 471 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + E++LI LA +P+ I ++ +P +L Y DLA+VFH H++ R Sbjct: 472 E----LCALRAPEEIELIRTLARFPQEIIDSVRGYDPARLTKYATDLATVFHKHYTVHR- 526 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V+ L RL L A ++I + L ++ + P M Sbjct: 527 ------VRGEAEPLMQARLNLYLATRTVIANVLGMLKITVPESM 564 >gi|134093383|ref|YP_001098458.1| arginyl-tRNA synthetase [Herminiimonas arsenicoxydans] gi|166232794|sp|A4G1E2|SYR_HERAR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|133737286|emb|CAL60329.1| putative arginyl-tRNA synthetase (ArgS) [Herminiimonas arsenicoxydans] Length = 577 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 201/611 (32%), Positives = 310/611 (50%), Gaps = 62/611 (10%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + A R+ + + ++ + +ERPRD +HG ++ N AM +++PL +P Sbjct: 1 MLAAQKQRITELFQAAVAPLVAGTELNPTVTLERPRDPSHGDVACNLAMQIAKPLKKNPR 60 Query: 63 TIAELIVARIKIDPDV----DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +A+++VA + +P +S IAG GFINL L+P+ + ++ +++ G +YG++ +G Sbjct: 61 EVAQVLVAALLDNPANRDLIESAEIAGPGFINLRLTPASRQSVVKTVLQQGAQYGKSNLG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G KV IEFVSANPTGP+HVGH R +GD ++SL GY VTRE+Y NDAG QI TLA Sbjct: 121 AGKKVIIEFVSANPTGPLHVGHGRQGALGDAMSSLFDAQGYAVTREFYYNDAGVQIATLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK------YSSELLNFPEEKWLPI 232 SV R + L PE Y G Y++ + + K + + + Sbjct: 181 TSVQARAR-GLKPGAEGWPESAYNGDYIQDIANDFLAKKTVSASDGLPVTASGDIDDIES 239 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + + DL+A ++ D + E + + + +D L + YE Sbjct: 240 IRAFAVAYLRREQDLDLQAFGVKFDNYYLESSLY--NDGKVAATVDALIKADKTYEL--- 294 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L R+T DD DR + KSDG+YTYF D+AY K++RGF Sbjct: 295 -------------DGALWLRTTDYRDDKDRVMKKSDGTYTYFVPDVAYHTVKWQRGFTQA 341 Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 I V GSDH G + R+ A A+ + + +L ++V + R+G +K+SKRAG ++TL Sbjct: 342 INVQGSDHHGTIARVRAGLQALDIGIPQGYPDYVLHKMVTVMRNGEEVKISKRAGSYVTL 401 Query: 411 RHVVDE--------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456 R +++ G D+VRF ++ RK FD QS ENPV+YVQY Sbjct: 402 RDLIEWSNGETVEGQERDLTRGRDAVRFFLISRKADTEFVFDVDVALSQSDENPVYYVQY 461 Query: 457 AYARCRSIFRQA--KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514 A+AR S+ Q D LD DL P E L+ LAEYP ++ A Sbjct: 462 AHARICSVLAQWTDGDEAALLDVDLSPLTA--------PREAALLAKLAEYPEALQRALE 513 Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574 P+++AFYL DLA+ H +++ R V ++ L M RL L+HA ++ +GL Sbjct: 514 ELGPHQVAFYLRDLAAELHSYYNAER-------VLVDDVALKMARLTLMHATRQVLRNGL 566 Query: 575 NIIGVESPNEM 585 +IGV +P M Sbjct: 567 ALIGVSAPARM 577 >gi|317404348|gb|EFV84773.1| arginyl-tRNA synthetase [Achromobacter xylosoxidans C54] Length = 566 Score = 532 bits (1372), Expect = e-149, Method: Composition-based stats. Identities = 183/595 (30%), Positives = 296/595 (49%), Gaps = 49/595 (8%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 S ++ + + + + + +++ERP+ AHG ++TN AM L++P +P + Sbjct: 7 KQLISLIQAAVAQSLPDAQADTAQAN-VLLERPKVAAHGDVATNVAMQLAKPAKRNPREL 65 Query: 65 AELIVARI----KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 A+ IV + V+S IAG GFINL ++ + + +++++ G +GR G Sbjct: 66 AQAIVEALLALPGARDLVESAEIAGPGFINLRVTAAARQAVITAVAEQGEAFGR-AARSG 124 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 K+ +EFVSANPTGP+HVGH R A +GD L L G++VTRE+Y NDAG QI LA+S Sbjct: 125 EKILVEFVSANPTGPLHVGHARQAALGDALCRLYDAIGWDVTREFYYNDAGNQIENLAIS 184 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD------KYSSELLNFPEEKWLPIVK 234 V R + + + D P Y G Y+ + ++ + L ++ Sbjct: 185 VQARAR-GVGTDSPDWPADGYKGDYIVDIARDFQAGKTIQASDGEPVTATGNIDSLEDIR 243 Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294 ++V + + DL+A ++ D + E + + + L G+ YE Sbjct: 244 AFAVAYLRREQDLDLQAFGLKFDNYYLESSLYT--SGRVEATVKALIAGGHTYE------ 295 Query: 295 KSKTTQKCDMDRKQLLFRSTMVG--DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 + L R+T +G DD DR + KS+G YTYF D+AY K K+ERGF Sbjct: 296 ----------EGGALWLRTTELGTGDDKDRVMRKSEGGYTYFVPDVAYHKAKWERGFHRA 345 Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 + + GSDH G V R+ A A+ K + +L ++V++ R G +K+SKRAG ++T+ Sbjct: 346 VNIQGSDHHGTVARVRAGLQALEEGIPKDYPSYVLHKMVKVMRGGQEVKISKRAGSYVTM 405 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R ++D VG D+VR+ ++ R+ FD +S ENPV+Y+QYA+AR S+ A Sbjct: 406 RDLIDWVGRDAVRYFLIQRRADTEFVFDVDLALSKSDENPVYYIQYAHARICSVINNAG- 464 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 SE L+ LAE+P V+ A P+ +AF+L D A+ Sbjct: 465 ------MPAAEVAAADASLLTAPSEFALMQRLAEFPHVVALAAQELAPHHIAFWLRDCAA 518 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 FHG ++ R V ++ L + RL+L ++ +GL ++GV +P M Sbjct: 519 DFHGWYNAER-------VLVDDPALKLARLRLAATTRQVLANGLALLGVSAPERM 566 >gi|308066957|ref|YP_003868562.1| arginyl-tRNA synthetase [Paenibacillus polymyxa E681] gi|305856236|gb|ADM68024.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) [Paenibacillus polymyxa E681] Length = 506 Score = 532 bits (1372), Expect = e-149, Method: Composition-based stats. Identities = 185/536 (34%), Positives = 283/536 (52%), Gaps = 31/536 (5%) Query: 51 MILSRPLGLDPLTIAELIVARIK-IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSG 109 M L+R +P IAE ++A + ++S IAG GFIN L+ SYL ++ + G Sbjct: 1 MQLTRIAKKNPRQIAEDLIANMDLASASIESAEIAGPGFINFRLNKSYLYAVIGQVQEQG 60 Query: 110 IEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169 +YGR G G KV IEFVSANPTG +H+GH R A VGD L +++ F+GY+VTREYYIND Sbjct: 61 ADYGRIQEGAGKKVQIEFVSANPTGSLHLGHARGAAVGDALCNVLDFAGYKVTREYYIND 120 Query: 170 AGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW 229 AG QI ++ S+ RY Q L +++PE Y G + KEL + LL+ Sbjct: 121 AGNQIYNMSRSIEARYLQEL-GQPAEMPEDGYHGEDIIGFAKELVAEKGDSLLSMEPGDR 179 Query: 230 LPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEG 289 +DY ++ + I+ DL+ + D + SE + + + ++ L + +YE Sbjct: 180 AAYFRDYGLEKELNKIKRDLELFRVPFDSWFSETSLY--ENGEVLKALNELRDREEIYE- 236 Query: 290 ILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGF 349 +T GDD DR L+K+DG+YTY D+AY + KY RG+ Sbjct: 237 ---------------KDGATWLNTTKYGDDKDRVLIKNDGTYTYLTPDIAYHRDKYARGY 281 Query: 350 DNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 D +I + G+DH GY+ R++A A+ ++ VL+ ++V L+++G +KMSKR G +T Sbjct: 282 DTIINIWGADHHGYIPRMKAAMEALGNDPDKLKVLIAQMVSLFQNGEKVKMSKRTGKAVT 341 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAK 469 + +++EVG D++R+ R LDFD S ENPVFYVQYA+AR S++RQA+ Sbjct: 342 MEDLMEEVGVDAIRYFFTMRSMDSHLDFDMDLAISTSNENPVFYVQYAHARACSVYRQAE 401 Query: 470 DIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLA 529 + + P + E L+ + E P + A P+++ Y+Y+LA Sbjct: 402 EQG----IAVLPLAEVDLSKLTAEHEYDLLRKIGELPEEVSVAAANFAPHRMIRYVYELA 457 Query: 530 SVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 S+FH ++ R V + T RL L AV + I + L ++GV +P M Sbjct: 458 SLFHSYYKAER-------VITEDAAQTQARLALFGAVRTTIANVLKLVGVSAPERM 506 >gi|154509454|ref|ZP_02045096.1| hypothetical protein ACTODO_01985 [Actinomyces odontolyticus ATCC 17982] gi|293189483|ref|ZP_06608203.1| arginine--tRNA ligase [Actinomyces odontolyticus F0309] gi|153799088|gb|EDN81508.1| hypothetical protein ACTODO_01985 [Actinomyces odontolyticus ATCC 17982] gi|292821573|gb|EFF80512.1| arginine--tRNA ligase [Actinomyces odontolyticus F0309] Length = 559 Score = 532 bits (1372), Expect = e-149, Method: Composition-based stats. Identities = 188/588 (31%), Positives = 305/588 (51%), Gaps = 41/588 (6%) Query: 6 DFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + ++ ++ L + ++ + D + +ERPR HG +TN AM L + G+ P Sbjct: 5 ELATLIRATLLDAAAAGRISIDPSLVPDPVTVERPRVREHGDWATNVAMQLGKKAGMAPR 64 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 A+++ + +DSV +AG GFIN+ L ++ +IV +G YGRN G Sbjct: 65 EFAQILADDLAAADGIDSVEVAGPGFINIRLGAGAAGELARTIVEAGAAYGRNETLSGRS 124 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 +N+E+VSANPTGP+H+G R A VGD+LA LMA SG VTREYY ND G+QI+ + S++ Sbjct: 125 INLEYVSANPTGPVHLGGARWAAVGDSLARLMAASGAAVTREYYFNDHGSQIDRFSHSLY 184 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS----ELLNFPEEKWLPIVKDYSV 238 R ++PE Y G Y+ + ++ + + + PEE+ + + + V Sbjct: 185 ARAM------GREVPEDGYGGQYIADIADQVRADARAAGEPDPITLPEEEAIEVFRARGV 238 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + M I++ L + D+F E+ H + I+ L +G +++ Sbjct: 239 ELMFAEIKERLHSFRADFDVFFHEESLHT--SGAVAAAIERLRERGEIFD---------- 286 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + + R+T GDD DR L+KSDG YFA D+AY+ K ERG D IY++G+ Sbjct: 287 ------EDGAVWLRTTTYGDDKDRVLIKSDGQAAYFAGDVAYYLNKRERGADVAIYLLGA 340 Query: 359 DHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 DH GY+ R+ A+ AA +K + + +L+ +LV L +DG P++MSKRAG +TL +VD V Sbjct: 341 DHHGYIARMMAMCAAFGDKPGENLQILIGQLVNLVKDGEPVRMSKRAGTIVTLDDLVDAV 400 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G D+ R+ ++ +D D + + S +NPV+YVQYA+ R ++ R A + D Sbjct: 401 GVDAARYALVRVSMDTQVDIDLDLLSQHSNDNPVYYVQYAHVRACNVARNAAEHGVTRDA 460 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 P + + E + L ++P + AT +EP+++ YL LA+ +H + Sbjct: 461 GFDPAALDSEADEALLAALA------QFPAQVAQATELREPHRITRYLESLAATYHAWYG 514 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R PR + RL L AV ++ +GL ++GV +P M Sbjct: 515 QCRVTPRG---DDPVEPGHIARLWLNDAVTQVLRTGLGLLGVSAPERM 559 >gi|238028767|ref|YP_002912998.1| arginyl-tRNA synthetase [Burkholderia glumae BGR1] gi|237877961|gb|ACR30294.1| Arginyl-tRNA synthetase [Burkholderia glumae BGR1] Length = 594 Score = 532 bits (1372), Expect = e-149, Method: Composition-based stats. Identities = 196/615 (31%), Positives = 311/615 (50%), Gaps = 65/615 (10%) Query: 7 FSSRLKNYLKEIDCKIKVEKKI---LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 + L + +K++ +K E + I +ERP+ AHG ++ N A+ L++PLG +P Sbjct: 9 LETLLADSVKQVVQALKGEADAAFAVPAITLERPKAAAHGDVACNVALQLAKPLGTNPRQ 68 Query: 64 IAELIVARIKIDPDV----DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +AE IVA + P ++ IAG GFINL L+ + ++ ++ +GR+ Sbjct: 69 LAEQIVAAVTAQPAAAGLVEAAEIAGPGFINLRLTAGAKQAVIGAVFAERDAFGRSDRDA 128 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LAL Sbjct: 129 GRRVLLEFVSANPTGPLHVGHGRQAALGDVLANVLASQGYAVHREFYYNDAGVQIGNLAL 188 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233 S R + L D+ PE Y G Y+ + +E A + + + L + Sbjct: 189 STQARAR-GLKPGDAAWPEAAYNGEYIADIAREYLAGATVAASDGQPVTGKGDVEDLEAI 247 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 + ++V + + DLKA ++ D + E + + + ++ L G YE Sbjct: 248 RRFAVAYLRREQDTDLKAFGVRFDQYYLESSLY--EEGRVERTVNALVAAGMTYE----- 300 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353 L R+T GDD DR + KSDG+YTYF D+AY K+ERGF +I Sbjct: 301 -----------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVAKWERGFTKVI 349 Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+R Sbjct: 350 NIQGSDHHGTIARVRAGLQGLGIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVR 409 Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 +++ G D+VRF ++ RK FD +Q+ ENP Sbjct: 410 DLIEWSGGAAPGSEASPDQLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+YVQYA+AR S+ + K + L ++ P +S + + L+ LAEYP ++ Sbjct: 470 VYYVQYAHARICSVMNEWKSRHGGDEARLAGADLSPLDSR---AAMALLQKLAEYPDMLT 526 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A P+ +AFYL +LA FH ++ R V ++ R+ L+ A ++ Sbjct: 527 HAAGELAPHAVAFYLRELAGEFHSFYNAER-------VLVDDEAQRTARIALLAATRQVL 579 Query: 571 NSGLNIIGVESPNEM 585 +GL ++GV SP++M Sbjct: 580 ANGLAVLGVSSPSKM 594 >gi|161523565|ref|YP_001578577.1| arginyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|189351665|ref|YP_001947293.1| arginyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|221211064|ref|ZP_03584043.1| arginyl-tRNA synthetase [Burkholderia multivorans CGD1] gi|238687040|sp|A9AE58|SYR_BURM1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|160340994|gb|ABX14080.1| arginyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|189335687|dbj|BAG44757.1| arginyl-tRNA synthetase [Burkholderia multivorans ATCC 17616] gi|221168425|gb|EEE00893.1| arginyl-tRNA synthetase [Burkholderia multivorans CGD1] Length = 598 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 200/616 (32%), Positives = 307/616 (49%), Gaps = 62/616 (10%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L AD ++ + LK D + I +ERP+ AHG ++ N AM L++PLG +P Sbjct: 12 LLADSVQQVAHALKGADAANAGVAFVAPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 71 Query: 63 TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +AE IVA + P V+S IAG GFINL LS + + ++ +++ G +G + Sbjct: 72 QLAEKIVAALTAQPGAQGLVESAEIAGPGFINLRLSAAAKQAVIGAVLAQGRAFGTSDRE 131 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA Sbjct: 132 KGKRVLLEFVSANPTGPLHVGHGRQAALGDALANVIASQGYAVHREFYYNDAGVQIGNLA 191 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPI 232 +S R + L D+ PE Y G Y+ + ++ A K + + L Sbjct: 192 ISTQARAR-GLKPGDAGWPEAAYNGEYIADIARDYMNGETVAAKDGEPVKGAGDVDDLDA 250 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + + DL+A ++ D + E + + +D L + G YE Sbjct: 251 IRKFAVAYLRREQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALIKAGMTYE---- 304 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L R+T GDD DR + KSDG+YTYF D+AY K+ERGF + Sbjct: 305 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTKV 352 Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 I + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+ Sbjct: 353 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTV 412 Query: 411 RHVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 R +++ G D+VRF ++ RK FD +Q+ EN Sbjct: 413 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 472 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 PV+YVQYA+AR S+ + K + + +L L+ LAEYP ++ Sbjct: 473 PVYYVQYAHARICSVLNEWKSRY---NGELAQLPQADLSQLTSPQAASLMQKLAEYPDML 529 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 +A P+ +AFYL DLA FH ++ R V ++ R L+ A + Sbjct: 530 THAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 582 Query: 570 INSGLNIIGVESPNEM 585 + +GL ++GV +P +M Sbjct: 583 LENGLAMLGVSAPEKM 598 >gi|332531547|ref|ZP_08407444.1| arginyl-tRNA synthetase [Hylemonella gracilis ATCC 19624] gi|332038910|gb|EGI75339.1| arginyl-tRNA synthetase [Hylemonella gracilis ATCC 19624] Length = 561 Score = 531 bits (1369), Expect = e-149, Method: Composition-based stats. Identities = 190/590 (32%), Positives = 301/590 (51%), Gaps = 43/590 (7%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + L L + ++ R E P+ HG L+T AAM +++PL P +AE Sbjct: 4 VKNELLQTLSIVLEQLLPGAG--ARAAFESPKLAEHGDLATTAAMQIAKPLKQPPRQVAE 61 Query: 67 LIVARIKIDP----DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 + + P VD+V IAG GFIN+ L P+ ++I+ ++ +G YGR KG + Sbjct: 62 DLRRALLAMPAFSIWVDAVEIAGPGFINIRLKPAAKQEIVREVLGAGERYGRQTP-KGQR 120 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 + +EFVSANPTGP+HVGH R A +GD +++L A G+EV RE+Y NDAG QI TLA+SV Sbjct: 121 MMVEFVSANPTGPLHVGHGRQAALGDAISNLYATQGWEVYREFYYNDAGVQIQTLAVSVQ 180 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDYS 237 R + L D+ PE Y G Y+ + + + L ++ ++ Sbjct: 181 ARAR-GLKPGDAGWPESAYNGDYIADIAADFMAGKTVQADDRSYTASGKVDDLDGMRLFA 239 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 V + DL+A N++ D + E + + ++ L G YE Sbjct: 240 VAYLRHEQDLDLQAFNLRFDNYYLESSLYT--SGRVDAAVEKLRAAGKTYE--------- 288 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 L RST GDD DR + K DG+YTYF D+AY K+ERGF ++ + G Sbjct: 289 -------QDGALWLRSTDYGDDKDRVMRKGDGTYTYFVPDVAYHISKWERGFQKVVNIQG 341 Query: 358 SDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 +DH G + R+ A A V + + +L +VR+ R G +K+SKRAG ++TLR +++ Sbjct: 342 TDHHGTIARVRAGLQAAGVGIPQGYPDYVLHTMVRVVRGGEEVKISKRAGSYVTLRDLIE 401 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 D+VRF +L RK FD +++ +NPV+YVQYA+AR S+ ++ Sbjct: 402 WTSKDAVRFFLLSRKPDTEYTFDVDLAVQKNNDNPVYYVQYAHARICSVLAAWREKDGGD 461 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 L ++ ++ ++ L++ LA+YP ++ A P+ +AFYL DLAS +H + Sbjct: 462 PVTLRDADLTALDT---SAAHTLMLKLAQYPDMLTGAARDFAPHDVAFYLRDLASSYHSY 518 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R + ++ + RL LV A A ++ +GL ++GV +P +M Sbjct: 519 YDAER-------ILVDDEAVKRARLALVAATAQVLRNGLAVLGVSAPEKM 561 >gi|326382074|ref|ZP_08203767.1| arginyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395] gi|326199500|gb|EGD56681.1| arginyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395] Length = 550 Score = 531 bits (1369), Expect = e-148, Method: Composition-based stats. Identities = 185/582 (31%), Positives = 298/582 (51%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 + ++ L+ +++ ++ ++ +V+ERPR HG +TN A+ L + G++P Sbjct: 4 TELAALLRAATQKVFQAHDLDTSLIPETVVVERPRSPEHGDYATNIALQLGKRAGVNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + DP +DS IAG GF+NL L+ + + ++S++ G +YGR V Sbjct: 64 LATWLADEFASDPGIDSAEIAGPGFVNLRLAAAAQNQTVASVLDRGADYGRGDELSTLNV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L ++A G +VTREYY ND G QIN A S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRVLAARGAQVTREYYFNDHGEQINRFANSLMA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + + K +L+ P + + V+ M Sbjct: 184 AAK------GEPTPEDGYAGEYIDDIAGTVVAKV-PGILDLPVDDAREAFRAEGVELMFA 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L D++ E+ D + + I L G +YE Sbjct: 237 HIKRTLHEFGTDFDVYTHENSMF--DRGLVDESIAELKANGNLYEA-------------- 280 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 RST GDD DR ++KSDG+ Y A D+AY K K++RG +++IY++G+DH GY Sbjct: 281 --DGAWWLRSTNYGDDKDRVVIKSDGNAAYIAGDIAYLKDKHDRGANHLIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 V RL+A AAA+ + VL+ ++V L +DG P++MSKRAG I L +V+ VG D+ R Sbjct: 339 VVRLKAAAAALGYDADAVEVLIGQMVNLVKDGQPVRMSKRAGTVIALDDLVEAVGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ +D D +++QS +NPV+YVQYA+AR ++ R A ++ + Sbjct: 399 YALIRSSIDVNIDIDLDLLRKQSADNPVYYVQYAHARLSALARHAAELG-------LSLS 451 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 E D +E LI + ++ V+ A +EP++++ YL LA +H ++ R P Sbjct: 452 TEHLELLDDEAEGDLIRTIGDFSEVVATAATLREPHRVSRYLESLAGAYHRFYARCRVLP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + RL L A ++ +GL ++GV +P M Sbjct: 512 QG---DEEPGDVHAARLALCAATRQVLANGLALVGVSAPERM 550 >gi|111225301|ref|YP_716095.1| arginyl-tRNA synthetase [Frankia alni ACN14a] gi|123142636|sp|Q0RD93|SYR_FRAAA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|111152833|emb|CAJ64578.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) [Frankia alni ACN14a] Length = 552 Score = 531 bits (1368), Expect = e-148, Method: Composition-based stats. Identities = 198/582 (34%), Positives = 303/582 (52%), Gaps = 34/582 (5%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 AD + + + ++ + + +ERP+ HG ++ A+ L++ P + Sbjct: 4 ADLADAIVAAIGRAVADGDLDVTVPTTVTVERPKTAGHGDYASPVALQLAKAARRKPREV 63 Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 AE++ R+ + SV IAG GF+N L+ L +I ++V +G YG +G +VN Sbjct: 64 AEVLAGRLATQSGIASVDIAGPGFLNFTLAGDALGEIARTVVRAGESYGHAAKPRGVRVN 123 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGP+ + R A VGD LA ++ +G+ V EYY+NDAG QI SV Sbjct: 124 LEFVSANPTGPVTLASARWAAVGDALARILTAAGFSVGGEYYVNDAGVQIERFGASVLAA 183 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 ++P Y G Y+ + + +LL+ PE+ L + + + M+ Sbjct: 184 AA------GREIPAEGYHGAYVAEIAAAVLAG-RPDLLDLPEDAALAVTTEEGLALMLTE 236 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 IR L+ + D + SE H + ID+L QG+VY+ Sbjct: 237 IRSTLEGFGVHFDRWASERALHT--AGALTKAIDDLRAQGHVYDA--------------- 279 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 + R+T GDD DRPL+KSDG TYF AD AY++ K RGFD +IY++G+DH GYV Sbjct: 280 -DGAVWLRTTDFGDDKDRPLVKSDGQPTYFCADAAYYRDKRGRGFDQLIYLLGADHHGYV 338 Query: 365 KRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 RL+A++A + A ++V++ +LV L R G P+KMSKRAG F+TL +VD VG D+ R Sbjct: 339 ARLKAISACFGDDPATNLDVIIGQLVTLSRGGAPVKMSKRAGTFLTLHDLVDAVGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ LD D V Q+ +NPVFYVQYA+AR S+ R A+ + + Sbjct: 399 YSLVRSSLDSSLDLDLDLVTRQTSDNPVFYVQYAHARISSLLRNAEALGLPTASETADVA 458 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ E+ L+ L E+PRVIE A + P+++A YL +LA V+H + R P Sbjct: 459 LLTH-----PREVDLLRGLGEFPRVIEAAASLRGPHRVARYLEELAGVYHRFYDACRVLP 513 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + LT RL LV A ++ +GL ++GV +P M Sbjct: 514 QG---DEEAGPLTGARLLLVAATRVVLANGLGLLGVSAPERM 552 >gi|325917527|ref|ZP_08179730.1| arginyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937] gi|325536243|gb|EGD08036.1| arginyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937] Length = 555 Score = 531 bits (1368), Expect = e-148, Method: Composition-based stats. Identities = 191/583 (32%), Positives = 306/583 (52%), Gaps = 37/583 (6%) Query: 11 LKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69 + ++ + + L V+ERP+ HG +TNAAM+L++ +P +A+ +V Sbjct: 2 IGQGIEALRANGTLPADTLPPDFVVERPKTREHGDFATNAAMLLAKAARSNPRALAQALV 61 Query: 70 ARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129 A + DV V IAG GFIN +L+P+ ++ ++ ++ G +YGR L G G V +E+VS Sbjct: 62 AALPASDDVAKVEIAGPGFINFHLAPTAYQREVAHVIKQGNDYGRGLAGNGRSVGVEYVS 121 Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189 ANPTGP+HVGH R A +GD+LA ++ +G+ V RE+Y NDAG QI LALSV R Q L Sbjct: 122 ANPTGPLHVGHGRAAAIGDSLARVLEANGWNVKREFYYNDAGVQIENLALSVQAR-AQGL 180 Query: 190 YNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 + + PE Y G Y+ V D + + L ++ ++V + Sbjct: 181 TPDSAGWPENGYRGDYIADVANAYLAGDTVDLEGHLVSGSKDPADLESIRRFAVAYLRNE 240 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 DL A + DI+ E ++ + + + L G+ YE Sbjct: 241 QNHDLAAFRVDFDIYFLESSLYK--DGKVEEAVQKLIASGHTYE---------------- 282 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 + L +ST GDD DR + KSDG+YTYF D+AY K++RG++ I +G+DH G + Sbjct: 283 EGGALWLKSTDFGDDKDRVMRKSDGTYTYFVPDVAYHLTKWQRGYERAITELGADHHGSL 342 Query: 365 KRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 R+ A A+ + +L ++V + RDG +K+ KRAG +ITLR +++E +D+V Sbjct: 343 TRVRAGLQAMELGIPQGWPEYVLHQMVTVMRDGEEVKLGKRAGGYITLRDLIEETSADAV 402 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 R+ ++ RK L FD + QS +NPVFYVQYA+AR S+ RQA++ + Sbjct: 403 RWFLIARKPDSQLTFDIDLARAQSNDNPVFYVQYAHARVCSVLRQAQEKGFKYEQ---AN 459 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 + D L +++ L+ YP V++ A A EPY++A YL +LA FH + + + Sbjct: 460 GLAQLARLDDEHSLNVMLELSRYPEVVDIAGQALEPYQIAQYLRELAHAFHTWYHNTK-- 517 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++ +L L A ++ +GL ++GV +P +M Sbjct: 518 -----LLVDDAAERDAKLTLAVATQQVLANGLELLGVSAPEKM 555 >gi|84494550|ref|ZP_00993669.1| arginyl-tRNA synthetase [Janibacter sp. HTCC2649] gi|84384043|gb|EAP99923.1| arginyl-tRNA synthetase [Janibacter sp. HTCC2649] Length = 548 Score = 531 bits (1368), Expect = e-148, Method: Composition-based stats. Identities = 192/581 (33%), Positives = 309/581 (53%), Gaps = 38/581 (6%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 + SS ++ L E + + +ERP++ HG STN A+ L++ G+ P +A Sbjct: 5 ELSSAIRAALLEATAAGDFTVDVPGEVRVERPKNRGHGDWSTNIALQLAKTAGMPPRDLA 64 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 + R++ + V +AG GF+N+ L + ++ +IV SG YG+N G +N+ Sbjct: 65 TRLAERLRAMDGIAQVDVAGPGFLNIGLDAASAGELARNIVESGTAYGKNDSEAGHTINL 124 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EF+SANPTGP+H+GH R A +GD++ L+ SG +VT EYYINDAGAQ++ ALSV Sbjct: 125 EFISANPTGPLHIGHTRWAALGDSMRRLLTASGADVTAEYYINDAGAQMDKFALSVLAGA 184 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245 + PEG YPG Y+ + K + ++ ++L+ PE++ + + + + A + I Sbjct: 185 K------GQPTPEGGYPGAYIGDLAKAVVEQ-RPDVLDLPEDEAIAVARPLAYTAQLAEI 237 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 + L+ + D++ SE + H G + ++ L QG+V D Sbjct: 238 QQTLERFGVFFDVWFSEQELHDG--GAVEKAVERLREQGHV----------------DDK 279 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365 + R+T DD DR L+++DG TYFAAD AY+ K +RGF IY++G+DH GY+ Sbjct: 280 DGAVWLRTTDFTDDKDRVLIRADGVPTYFAADAAYYLSKKDRGFTEKIYLLGADHHGYIG 339 Query: 366 RLEAVAAAVSEKK-AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 RL+A+AA + I+V + +LV L K+SKRAG+ I L ++D +G D+VR+ Sbjct: 340 RLKAIAACAGDDPEVNIDVRIGQLVNL----NGAKLSKRAGNIIELNDLLDWIGKDAVRY 395 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 + L D ++++Q+ +NPVFYVQYA+AR ++ R A + D P Sbjct: 396 NLARYPADSPLSLDGEELRKQTNDNPVFYVQYAHARTANVSRLAGEDGVRRDDGFDPA-- 453 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 D +E L+ L ++PRV+ A +EP+++A YL DLA +H + R P Sbjct: 454 ----LLTDATEATLLAILGDFPRVVAQAAQLREPHRVARYLEDLAGRYHKWYDTCRVRPM 509 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L RL L A ++ +GL+++GV +P M Sbjct: 510 N--AEEEVTDLHRTRLWLNDATRQVLANGLDLLGVSAPERM 548 >gi|254468228|ref|ZP_05081634.1| arginyl-tRNA synthetase [beta proteobacterium KB13] gi|207087038|gb|EDZ64321.1| arginyl-tRNA synthetase [beta proteobacterium KB13] Length = 552 Score = 531 bits (1368), Expect = e-148, Method: Composition-based stats. Identities = 186/586 (31%), Positives = 302/586 (51%), Gaps = 41/586 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 +++ N L + ++ +E +D I IERP+ HG S+N A+ L++ + +P +A+ Sbjct: 1 MKNQISNILSDALQQLNIEISEVD-IHIERPKTLEHGDYSSNIALQLAKGMKKNPREVAQ 59 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 LI+ ++ + + +AG GFIN +LS I+ I+ +YGRN G K+ +E Sbjct: 60 LIIDQVGSEQLFSKLELAGPGFINFHLSDIGRSLIIKEIIQKDDQYGRNTSGAKQKLQVE 119 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+H+GH R A +GD+LA +M +G+EVTRE+Y NDAG QIN LALSV R Sbjct: 120 FVSANPTGPLHIGHGRGAAIGDSLARIMDANGWEVTREFYYNDAGQQINNLALSVQSR-L 178 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADK-----YSSELLNFPEEKWLPIVKDYSVQAM 241 + + D+D PE Y G Y+ + + + L +K +SV + Sbjct: 179 KGVTPEDADFPEDGYRGDYILEIAEAFKILSSITVDRETVTATGNVDDLEAIKQFSVAFL 238 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 DL A D+F E F+ + + +++ L G+ Y+ Sbjct: 239 RNEQNIDLAAFQTHFDVFTLESSFYENE--AVHEVVQLLTDNGFAYK------------- 283 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 R+T GDD DR ++KSDG YTYF D+AY K++RGF +I G+DH Sbjct: 284 ---KEDATWLRTTDFGDDKDRVMVKSDGGYTYFVPDVAYHLNKWQRGFVRVINEQGADHH 340 Query: 362 GYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 + R+ A + + +L ++V + ++ +K+SKRAG ++TLR ++D+VG Sbjct: 341 STITRVRAGLQGLQKKIPQDWPEYVLHQMVTVTKNNQEVKISKRAGSYVTLRDLIDQVGC 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ RF ++ RK L FD Q+ ENPV+Y+QYA+AR ++ Q++ Sbjct: 401 DATRFFLIARKPDSQLVFDIDLATSQTNENPVYYIQYAHARICAVLNQSE-------LGQ 453 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + E QLI L+E+P +I A P+ +A +L DLA FH +++ Sbjct: 454 DQLLQFNEVLLSTKHEHQLIKRLSEFPEIISLAAEESSPHYIATFLKDLAGDFHSYYNAN 513 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +++ + RL L+ A +++ +GL ++GV +PN+M Sbjct: 514 KF-------LIDDQNIKCARLALILATKNVLRNGLQLLGVSAPNKM 552 >gi|153872908|ref|ZP_02001666.1| Arginyl-tRNA synthetase, class Ic [Beggiatoa sp. PS] gi|152070626|gb|EDN68334.1| Arginyl-tRNA synthetase, class Ic [Beggiatoa sp. PS] Length = 585 Score = 531 bits (1367), Expect = e-148, Method: Composition-based stats. Identities = 198/612 (32%), Positives = 307/612 (50%), Gaps = 64/612 (10%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + L L ++ K + K I +I +ER RD HG + N AM L++ L + P +A Sbjct: 5 LHTLLTQALTQLQSKGDIPKDIEPQIHLERTRDNQHGDFACNVAMALAKILKMRPRDLAT 64 Query: 67 LIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 IV ++ K D + + IAG GFIN++LS ++ I+ + YG++ +G G V I Sbjct: 65 QIVEQLPKDDELIAKIEIAGPGFINVFLSQKAYDTVIEDILTAKETYGQSQVGAGQSVMI 124 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+HVGH R A G LA+L+ +G++V +EYY+NDAG Q++ LA+SV+ RY Sbjct: 125 EFVSANPTGPLHVGHGRGAAYGAALANLLTVAGFKVHKEYYVNDAGRQMDILAISVWLRY 184 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL------------------------ 221 + L P Y G Y+ + L + L Sbjct: 185 LE-LCGETITFPSNGYQGDYVWDIAASLHRERGDALRQDSKIVFDNVPPDINQGGDKELH 243 Query: 222 --------LNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273 E+ I+ + ++ IRDDL+ + +D + SE + + Sbjct: 244 VDALIDRSKQLLGEESYHIIFQRGLGIILAEIRDDLEQFGVVYDEWFSESNL--TTTHTV 301 Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333 I+ L G++YE L FRS+ GD+ DR +++ +G +TY Sbjct: 302 ARAIEQLKATGHIYE----------------QDGALWFRSSAFGDEKDRVVVRENGQFTY 345 Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393 F++D+AY K ERGFD +I + G+DH GYV R++A A+ ++ VLL + LYR Sbjct: 346 FSSDIAYHLNKLERGFDYLINIWGADHHGYVSRVKAAMTALGADAQRLTVLLVQFASLYR 405 Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453 ++MS R+G+F TLR + EVG D+ RF + RK+ + L+FD K Q +NPV+Y Sbjct: 406 GKERLQMSTRSGEFATLRELRSEVGRDAARFFYIQRKSEQHLNFDLELAKSQKNDNPVYY 465 Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513 VQYA+ R +FR+ +D + + + Q E L+V L+ Y +IE A Sbjct: 466 VQYAHTRIAGVFRELRDKNLVWHHNKALLSKLTQAH-----ERALLVMLSRYSEMIEAAA 520 Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573 + EP++L +YL DLA FH + + + ++ L RL L A ++++G Sbjct: 521 HSYEPHQLTYYLRDLAQQFHTCYDSHK-------ILIDDEDLRNARLSLSAACQQVLHNG 573 Query: 574 LNIIGVESPNEM 585 L II V +P M Sbjct: 574 LTIISVSAPEVM 585 >gi|323524573|ref|YP_004226726.1| arginyl-tRNA synthetase [Burkholderia sp. CCGE1001] gi|323381575|gb|ADX53666.1| arginyl-tRNA synthetase [Burkholderia sp. CCGE1001] Length = 596 Score = 531 bits (1367), Expect = e-148, Method: Composition-based stats. Identities = 190/615 (30%), Positives = 310/615 (50%), Gaps = 63/615 (10%) Query: 7 FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 + L + +K++ + + + I +ERP+ AHG ++ N AM L++PL ++P Sbjct: 9 LETLLADTVKQVALATQGATEAAFVSPTIALERPKVAAHGDVACNVAMQLAKPLRVNPRQ 68 Query: 64 IAELIVARI----KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +A+ IV + + ++S +AG GFINL L+ + + ++++++ YGR+ Sbjct: 69 LAQQIVDTLLGQPQAQGLIESAEVAGPGFINLRLAAAAKQAVVTAVLAEQDAYGRSQRDA 128 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G V IEFVSANPTGP+HVGH R A +GD L++++A G++V RE+Y NDAG QI TLAL Sbjct: 129 GKHVLIEFVSANPTGPLHVGHGRQAALGDALSNVLASQGWDVHREFYYNDAGVQIGTLAL 188 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPIV 233 S R + L D+ P+ Y G Y+ + K+ + + + L + Sbjct: 189 STQARAR-GLAPGDAGWPDSAYNGEYIADIAKDYLNGVTVSASDGEPVTGARDVENLDAI 247 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 + ++V + + DL+A ++ D + E + + + L G YE Sbjct: 248 RRFAVAYLRREQDMDLQAFGVKFDQYYLESSLYT--EGRVEKTVQALIAAGKTYE----- 300 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353 L R+T GDD DR + KSDG+YTYF D+AY K+ERGF +I Sbjct: 301 -----------QEGALWLRTTDDGDDKDRVMRKSDGTYTYFVPDVAYHVAKWERGFTKVI 349 Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 + GSDH G + R+ A + K + +L ++V + R+G +K+SKRAG ++T+R Sbjct: 350 NIQGSDHHGTIARVRAGLQGLGIGIPKGYPDYVLHKMVTVMRNGEEVKISKRAGSYVTVR 409 Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 +++ G D+VRF ++ RK FD +Q+ ENP Sbjct: 410 DLIEWSGGATPGSEAAVDLIDEETIRRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V YVQYA+AR S+ + K + + L ++ P SE + L+ LAE+P +++ Sbjct: 470 VHYVQYAHARICSVIAECKARYGADESALAKVDLAPLSSE---RAMALLNKLAEFPDMLQ 526 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A P+ +AFYL DLA FH ++ E V ++ R+ L+ A ++ Sbjct: 527 HAADELAPHAVAFYLRDLAGEFHSFYNDKAER-----VLVDDAAERNARVALLAATRQVL 581 Query: 571 NSGLNIIGVESPNEM 585 +GL IIGV +P +M Sbjct: 582 ANGLAIIGVSAPVKM 596 >gi|115373269|ref|ZP_01460569.1| arginyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1] gi|310824517|ref|YP_003956875.1| arginyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1] gi|115369715|gb|EAU68650.1| arginyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1] gi|309397589|gb|ADO75048.1| Arginyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1] Length = 592 Score = 531 bits (1367), Expect = e-148, Method: Composition-based stats. Identities = 193/593 (32%), Positives = 311/593 (52%), Gaps = 18/593 (3%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + + + L + ++ +++ +E P++ AHG S N AM+L++ G P Sbjct: 1 MRQKVRALINDTLTALKNAGTLKLELVPGYTVEAPKNPAHGDWSVNVAMMLTKAEGKPPR 60 Query: 63 TIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK-G 120 IA+ IV + V V +AG GF+N L +++ ++ +G +G G Sbjct: 61 DIAQAIVKGLVDPQGIVTKVDVAGPGFLNFTLKEQVHQQVAREVLQAGETFGHQAPKSTG 120 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +V +EFVSANPTGP+H+GH R A +GD +A L+ +G++VTRE+YIND G Q+ TL + Sbjct: 121 KRVLVEFVSANPTGPVHIGHARGAFMGDAVARLLEAAGHDVTREFYINDYGKQVETLGRT 180 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V RY+Q L+ +L EG YP Y+ + K+ + + L+ PE +WLP ++ Sbjct: 181 VHKRYRQ-LFGQQVELGEGEYPAEYVIDIAKDWKEAVGDKYLHLPESEWLPEAMAVGIRE 239 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP------- 293 +K IR L+ NI+HD+F SE H + I+D R+G YE Sbjct: 240 NLKAIRATLQQANIRHDVFFSEASLHT--SGKVLAIVDEYKRRGATYEAAEAERTGEKVR 297 Query: 294 -PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 SK Q D R R++ GDD DR +L+ DG+ Y ADLAY + KY RGFD + Sbjct: 298 HEDSKAAQYTDRQRGGTFLRTSQHGDDEDRIILRHDGTPVYLTADLAYHQEKYNRGFDRI 357 Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412 I V G+DH+G+ R+ A + ++ LL +LVR+ R G +K+SKR G L Sbjct: 358 IDVFGADHAGHTPRISAGMTLLGLDAKKLEFLLVQLVRITRGGEEVKVSKRKGTVFELED 417 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 ++ E G+D RF+ L + + DFD VK+QSK+NPVFY QY +ARC SI ++A + Sbjct: 418 LIHEAGADVCRFLFLVKTANSRFDFDLDLVKKQSKDNPVFYFQYGHARCASILKKAAEKG 477 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 L EL ++ +++ P V+ +A EP+ + ++ +L + F Sbjct: 478 TPF-VGLEGLTPAHLARLTLPEELSMLKKMSQLPDVVASAAERLEPHHVLYFCQELITDF 536 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H +++ + +P + + + + T RL LV A+ + S ++G+++P M Sbjct: 537 HSYYTKYKTDP----IISGDSEKTQGRLGLVAALKQTLRSAFALLGIQAPEYM 585 >gi|319778817|ref|YP_004129730.1| Arginyl-tRNA synthetase [Taylorella equigenitalis MCE9] gi|317108841|gb|ADU91587.1| Arginyl-tRNA synthetase [Taylorella equigenitalis MCE9] Length = 560 Score = 531 bits (1367), Expect = e-148, Method: Composition-based stats. Identities = 189/567 (33%), Positives = 297/567 (52%), Gaps = 47/567 (8%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV----DSVFIAGKG 87 I +ERP++ HG LSTN AM L++PL +P +A+ IV ++ +P DSV IAG G Sbjct: 28 IQLERPKNPEHGDLSTNIAMQLAKPLKKNPREVAQDIVDTLQSNPSYNLLLDSVEIAGPG 87 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FIN + S + I+ I YG N KV +EFVSANPTGP+HVGH R A +G Sbjct: 88 FINFKFNVSVHQDIIHLIQSQKEIYG-NSPKNYKKVIVEFVSANPTGPLHVGHARQAALG 146 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D + L+ +GY++ RE+Y NDAG QIN LA SV R + + + D P Y G Y+ Sbjct: 147 DCICRLLEAAGYDIYREFYYNDAGNQINNLASSVQAR-LKGIDPDHPDFPADGYRGDYIN 205 Query: 208 HVGKELADKYSSELLNFP-----EEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262 + ++ K + + + + + L ++ ++V + + DL A N++ D + E Sbjct: 206 DIARDFITKETVKADDIEITASGDVENLNDIRKFAVAYLRREQDLDLLAFNLKFDRYYLE 265 Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG--DDV 320 + + + ++ L G+ YE L R+T +G DD Sbjct: 266 SSLYT--DGKVEETVNTLTSNGHTYE----------------QDGALWLRTTELGTGDDK 307 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV--SEKK 378 DR + KSDG+YTYF D+AY K K++RG+ I + GSDH G V R+ A + K Sbjct: 308 DRVMRKSDGTYTYFVPDVAYHKTKWDRGYQKAIDIQGSDHHGTVARVRAGLQGLNLGIPK 367 Query: 379 AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFD 438 + +L ++VR+ R+G +K+SKRAG ++T+R ++D VG D+ R+ ++ RK FD Sbjct: 368 DYPSYILHKMVRVMRNGEEVKISKRAGSYVTMRDLIDWVGQDATRYFLIQRKADTEFTFD 427 Query: 439 FCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQL 498 + +ENPVFY+QYA+AR + + A ++ +D SE+ L Sbjct: 428 IDLALSKKEENPVFYIQYAHARICKLLKDAGELAGQVDQADISL-------LTAPSEINL 480 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 + L+E P +I+ A P+ +AF+L DLA FH +S + V ++ L + Sbjct: 481 LKRLSELPDLIQIAIKELSPHLVAFWLTDLARDFHSWYSSEK-------VFVDDISLKLA 533 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 RL L A ++ + L+++GV +P +M Sbjct: 534 RLALADATKQVLANALDLLGVSAPTDM 560 >gi|30248381|ref|NP_840451.1| arginyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718] gi|39932153|sp|Q82XC1|SYR_NITEU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|30138267|emb|CAD84275.1| Arginyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718] Length = 586 Score = 530 bits (1366), Expect = e-148, Method: Composition-based stats. Identities = 193/613 (31%), Positives = 307/613 (50%), Gaps = 67/613 (10%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 DF S L + + + ++ +I + RP+ HG S+N AM L+R L +PL +A Sbjct: 8 DFKSHCIQLLDQA-ARQVLPDEVGVQIELLRPKLADHGDYSSNLAMKLARRLRRNPLELA 66 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 + ++ + V+ +AG GFIN +L + ++ L +++ +G +G + +G G + I Sbjct: 67 KALIGALPDSSCVEKADVAGGGFINFFLKKTAKQQFLHAVLQAGDSFGHSRLGAGKTIQI 126 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+HVGH R A G +LA++M +GY VTRE+Y+NDAG Q++ L LS + RY Sbjct: 127 EFVSANPTGPLHVGHGRGAAFGASLANIMTAAGYAVTREFYVNDAGRQMDILTLSTWLRY 186 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN------------------FPEE 227 L P Y G Y+ + E+ + E+ Sbjct: 187 LD-LCGLSFSFPANAYRGQYVADMASEIYQAQGDRYAHRSDATIRQLTEISTSTTIDSED 245 Query: 228 KWLPI---------------VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 + L + ++ + + R+DL ++ + + SE D Sbjct: 246 ERLDRLITAAKSILDQDYADLHNFVLTEQLADCRNDLMEFGVEFETWFSEQSLF--DSGM 303 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + + L + +Y L FRST GD+ DR + + +G YT Sbjct: 304 VARAVQLLDDKKLLYR----------------QDGALWFRSTDFGDEKDRVVQRENGLYT 347 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 YFA+D+AY KYERGFD ++ + G+DH GY+ R++ A+S ++ + L + LY Sbjct: 348 YFASDIAYHLSKYERGFDYLLNIWGADHHGYIPRVKGAIEALSLDPGRLEIALVQFAVLY 407 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 RDG + MS R+G+F+TLR + EVG+D+ RF + RK+ + LDFD K QS +NPV+ Sbjct: 408 RDGKKVSMSTRSGEFVTLRQLRQEVGNDAARFFYVLRKSDQHLDFDLDLAKSQSNDNPVY 467 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 YVQYA+AR S+ Q D+ R E D +EL L+ + ++ IE A Sbjct: 468 YVQYAHARICSVLGQWGGA-----EDILARA--ETELLTDPAELVLLQKMIDFTDTIEAA 520 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572 + P+ +AF+L +LA FH +++ R + L + RL L+ AV I++ Sbjct: 521 AKERAPHLIAFFLRELAGEFHSYYNSTRF-------LVEDESLKITRLALISAVRQILSK 573 Query: 573 GLNIIGVESPNEM 585 GL ++GV +P EM Sbjct: 574 GLTLLGVTAPREM 586 >gi|312194803|ref|YP_004014864.1| arginyl-tRNA synthetase [Frankia sp. EuI1c] gi|311226139|gb|ADP78994.1| arginyl-tRNA synthetase [Frankia sp. EuI1c] Length = 558 Score = 530 bits (1366), Expect = e-148, Method: Composition-based stats. Identities = 193/583 (33%), Positives = 302/583 (51%), Gaps = 30/583 (5%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 AD + + + ++ ++ + + +ERP++ HG ++ AA+ L++ P + Sbjct: 4 ADLADVIVSAVRAAVTDGAIDVAVPATVPVERPKNPEHGDYASPAALQLAKAARRAPREV 63 Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 AEL+ R++ DP + +V +AG GF+N+ L+ L ++ +IV +G YGR KG +VN Sbjct: 64 AELLADRLRKDPGIATVDVAGPGFLNIKLASDALGELARAIVRAGEAYGRAPQRKGVRVN 123 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGP+ + R A VGD L + +GY+ EYY+NDAG QI SV Sbjct: 124 VEFVSANPTGPVTLASTRWAAVGDALVRIFDAAGYDTASEYYVNDAGVQIARFGASVLAA 183 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 + PE Y G Y+ + L + LL + + L + + M+ Sbjct: 184 AK------GEPTPEDGYHGAYVAEIAARLLADHPD-LLAGDDAQALAVAARDGLALMLTE 236 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 IR L+ + D++ SE H + + + +L G+VY+ Sbjct: 237 IRSTLEGFGVHFDVWKSELSMH--EAGELEAAVADLRTHGHVYDA--------------- 279 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 + R+T GDD DRPL+KSDG TYF AD AY++ K RGFD ++ ++G+DH GY+ Sbjct: 280 -DGAVFLRTTDFGDDKDRPLIKSDGQPTYFCADAAYYRNKRGRGFDRLVLLLGADHHGYI 338 Query: 365 KRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 RL+A+AA + + ++V++ +LV L R G P+KMSKRAG+F+TL +VD VG D+ R Sbjct: 339 GRLQALAACFGDNPDESLDVIIGQLVTLSRGGEPVKMSKRAGNFLTLADLVDVVGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD-LDFDLFPR 482 + ++ LD D + +Q+ +NPVFYVQYA+AR S+ R A + D Sbjct: 399 YSLVRSSLDSSLDLDLDLIAKQTNDNPVFYVQYAHARIASLLRNAAALGITPADGPGAVL 458 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 + I E L+ L E P V+ +A + P+++A YL +LA +H R Sbjct: 459 DGIDVSLLEHPREGDLLRALGELPTVVASAASLRAPHRVARYLEELAGTYHRFNDACRVL 518 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 PR LT RL LV A ++ +GL ++GV +P M Sbjct: 519 PRG---DEEPTPLTAARLLLVEATKVVLANGLRLLGVSAPERM 558 >gi|226226873|ref|YP_002760979.1| arginyl-tRNA synthetase [Gemmatimonas aurantiaca T-27] gi|226090064|dbj|BAH38509.1| arginyl-tRNA synthetase [Gemmatimonas aurantiaca T-27] Length = 561 Score = 530 bits (1366), Expect = e-148, Method: Composition-based stats. Identities = 192/584 (32%), Positives = 307/584 (52%), Gaps = 43/584 (7%) Query: 8 SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 + L+ L + + V+ERPRD + G +TN AM L++PLG P +AE Sbjct: 15 ADALRAELVRAARSLGAPDDVAP--VLERPRDPSFGDWATNLAMTLAKPLGKKPRDLAEA 72 Query: 68 IVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 ++A + + + IAG GFIN L P + + L I+ + ++GR+ IG+G +V +E Sbjct: 73 LIAALDTARVGISAAEIAGPGFINFRLDPGFQARGLLQILAAPEQWGRHNIGQGERVVVE 132 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+HVGH R A +GD +++L+ ++G+ V RE+Y NDAGAQI LA S R + Sbjct: 133 FVSANPTGPLHVGHGRQAALGDAISTLLEWTGWNVDREFYYNDAGAQIANLAKSTQARVR 192 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 + + + ++PEG Y G Y++ E+A++Y ++ E K L +++++V A+ Sbjct: 193 E-IGGAELEIPEGGYHGEYIR----EIAERYVAQHAVDAEGKDLEAMREFAVAALRHEQD 247 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 DL+A ++ D + E + + ++ L + GY +E D Sbjct: 248 LDLQAFGVKFDTYYLESSLYT--DGRVDKTVEALKQSGYTFE----------------DN 289 Query: 307 KQLLFRSTMVGDDVDRPLLKSD---GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 L R+T GDD DR + KS+ G YTYF D+AY K+ERG+ I V G+DH Sbjct: 290 GALFLRTTAFGDDKDRVMKKSEAKGGDYTYFVPDVAYHVTKWERGYHRAINVQGADHHST 349 Query: 364 VKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 R+ A A+ + + +L ++V + + G +K+SKRAG ++T+R ++DEVG D+ Sbjct: 350 TTRVRAGLQALGIGIPQGYPDYVLHQMVTVMKGGEEVKISKRAGSYVTVRDLIDEVGRDA 409 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 VR+ L RK L FD + QS+ENPV+YVQ A+AR IFR ++D Sbjct: 410 VRYFYLMRKGDSQLVFDVDLARSQSEENPVYYVQMAHARMCGIFR-----VGEIDATGVT 464 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + + +E +LI L ++P +++ A EP+++A +L + A H + Sbjct: 465 AEGVDLGVLSEPAEQELIKQLLDFPAIVKGAADNLEPHRIAGWLLETARAAHTWYHKHH- 523 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V +T RL L A I +GL I+G+ +P M Sbjct: 524 ------VLGEPEAITRARLVLARATQLGIAAGLRILGLTAPERM 561 >gi|167036620|ref|YP_001664198.1| arginyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320115047|ref|YP_004185206.1| arginyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166855454|gb|ABY93862.1| arginyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319928138|gb|ADV78823.1| arginyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 562 Score = 530 bits (1365), Expect = e-148, Method: Composition-based stats. Identities = 199/591 (33%), Positives = 322/591 (54%), Gaps = 38/591 (6%) Query: 2 YLFADFSSRLKN----YLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL 57 + +K+ +K + + +++ I IE P++ HG L+ N AM++++ Sbjct: 3 NIIQKVKDEIKDMVTTAIKNSVKEGLMNIEVIPEIEIEEPKEKQHGDLAINTAMVIAKQA 62 Query: 58 GLDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116 + P IAE+IV+++ + ++ + IAG GFIN +L +L + L + G +YGR Sbjct: 63 KMPPKKIAEIIVSKMDPSNTFIEKIEIAGPGFINFFLKDKFLEETLKLVYERGKDYGRVN 122 Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176 IG G KV +EFVSANPTGPMH+G+ R +GD LA+++ ++GY+VTRE+YINDAG QI Sbjct: 123 IGNGKKVQVEFVSANPTGPMHMGNARGGALGDALAAVLDYAGYDVTREFYINDAGNQIEK 182 Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236 S+ RY Q L +++PEG Y G + +E + Y + + P E + DY Sbjct: 183 FGYSLEARYLQLL-GIPAEVPEGGYQGEDIIDRAREFLEIYGDKYKDVPSEVRRKALIDY 241 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 ++ ++ I++DL I++D++ SE + D + +I+ L ++GY YE Sbjct: 242 GLKKNLEKIKEDLALYGIEYDVWFSEQSLY--DSGEVYKVIEELKQKGYTYE-------- 291 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355 L F+ T+ G + D L++++G TY A+D+AY K K+ RGFD +I V Sbjct: 292 --------KDGALWFKMTLFGAEKDDVLVRTNGFPTYLASDIAYHKNKFITRGFDWVINV 343 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 G+DH G+V ++ A+ +++V+L +LV+L G +KMSKR G +TLR ++D Sbjct: 344 WGADHHGHVAPMKGAMQALGIDPDRLDVVLMQLVKLIEGGQVVKMSKRTGRMVTLRDLID 403 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 EVG D+ RF R +DFD KEQS ENPVFYVQYA+AR SI RQ ++ + Sbjct: 404 EVGKDAARFFFNMRSADSSIDFDLDLAKEQSNENPVFYVQYAHARICSIIRQLEEEGVKI 463 Query: 476 D-FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 D D +++ +E E + + A +P I A P+++ Y+ D+AS+FH Sbjct: 464 DNIDEVDLSLLKEEEEKELIKKL-----AYFPEEITIAAKTLAPHRITRYILDVASLFHS 518 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ R V+ L R L+ AV ++I + L+I+ + +P M Sbjct: 519 FYNSHR-------VKGVEEDLMKARFVLILAVKTVIKNALDILKITAPERM 562 >gi|256751682|ref|ZP_05492557.1| arginyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1] gi|256749491|gb|EEU62520.1| arginyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1] Length = 562 Score = 530 bits (1365), Expect = e-148, Method: Composition-based stats. Identities = 199/591 (33%), Positives = 323/591 (54%), Gaps = 38/591 (6%) Query: 2 YLFADFSSRLKN----YLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL 57 + +K+ +K + + +++ I IE P++ HG L+ N AM++++ Sbjct: 3 NIIQKVKDEIKDMVTTAIKNSVKEGLMNIEVIPEIEIEEPKEKQHGDLAINTAMVIAKQA 62 Query: 58 GLDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116 + P IAE+IV+++ + ++ + IAG GFIN +L +L + L + G +YGR Sbjct: 63 KMPPKKIAEIIVSKMDPSNTFIERIEIAGPGFINFFLKDKFLEETLKLVYERGKDYGRVN 122 Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176 IG G KV +EFVSANPTGPMH+G+ R +GD LAS++ ++GY+VTRE+YINDAG QI Sbjct: 123 IGNGKKVQVEFVSANPTGPMHMGNARGGALGDALASVLDYAGYDVTREFYINDAGNQIEK 182 Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236 S+ RY Q L +++PEG Y G + +E + Y + + P E+ + +Y Sbjct: 183 FGYSLEARYLQLL-GIPAEVPEGGYHGEDIIDRAREFLEIYGDKYKDVPSEERRKALIEY 241 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 ++ ++ I++DL I++D++ SE + D + +I+ L ++GY YE Sbjct: 242 GLKKNLEKIKEDLALYGIEYDVWFSEQSLY--DSGEVYKVIEELKQKGYTYE-------- 291 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355 L F+ T+ G + D L++S+G TY A+D+AY K K+ RGFD +I V Sbjct: 292 --------KDGALWFKMTLFGAEKDDVLVRSNGFPTYLASDIAYHKNKFITRGFDWVINV 343 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 G+DH G+V ++ A+ +++V+L +LV+L G +KMSKR G +TLR ++D Sbjct: 344 WGADHHGHVAPMKGAMQALGIDPDRLDVVLMQLVKLIEGGQVVKMSKRTGRMVTLRDLID 403 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 EVG D+ RF R +DFD KEQS ENPVFYVQYA+AR SI RQ ++ + Sbjct: 404 EVGKDAARFFFNLRSADSPIDFDLDLAKEQSNENPVFYVQYAHARICSIIRQLEEEGVKI 463 Query: 476 -DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 + D +++ +E E + + A +P I A P+++ Y+ D+AS+FH Sbjct: 464 ENIDEVDLSLLKEEEEKELIKKL-----AYFPEEITIAAKTLAPHRITRYVLDVASLFHS 518 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ R V+ L R L+ AV ++I + L+I+ + +P M Sbjct: 519 FYNSHR-------VKGVEEDLMKARFVLILAVKTVIKNALDILKITAPERM 562 >gi|148652106|ref|YP_001279199.1| arginyl-tRNA synthetase [Psychrobacter sp. PRwf-1] gi|172048457|sp|A5WC58|SYR_PSYWF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|148571190|gb|ABQ93249.1| arginyl-tRNA synthetase [Psychrobacter sp. PRwf-1] Length = 609 Score = 530 bits (1365), Expect = e-148, Method: Composition-based stats. Identities = 187/627 (29%), Positives = 304/627 (48%), Gaps = 70/627 (11%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 + + L + K + + + + I R + HG ++N A+ ++ +P + Sbjct: 7 DEIFALLDSAAKVLIDQGVLPADWQNNSQITRSKSPEHGDYASNIALTAAKAAKSNPRAL 66 Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 AE + A + + + + IAG GFIN++L+ +L +I +YG K+ Sbjct: 67 AEQLTAALPANDSIAKLEIAGPGFINIFLNTDAKFAVLDAIFAKNQKYGLTDEFANKKIQ 126 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPT +HVGH R A G ++A+L+ GYEVTREYY+NDAG Q++ LA S + R Sbjct: 127 VEFVSANPTSSLHVGHGRGAAFGMSVANLLEAVGYEVTREYYVNDAGRQMDILATSTYLR 186 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADK--------YSSELLNFPEEK-------- 228 Y Q L P G Y G Y+ + + + + Y+ N PE++ Sbjct: 187 YLQ-LNGEQIHFPVGGYQGDYVTDIAQTIKTQQNDAYVHSYADISANAPEDEVSEVNDAG 245 Query: 229 --------------------------WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262 + + ++ ++ I+DDL ++ + + SE Sbjct: 246 EKEVVSGDKNAHIDVIIANSKQALGDNYAVFLNAALSEILGDIKDDLNEFGVRFERWFSE 305 Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322 I ++ L +G++YE + FRST GD+ DR Sbjct: 306 KSI----ADEIEPVLAELDSKGHLYE----------------KDGNIWFRSTDFGDEKDR 345 Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 + +++G TYFA+D+AY K K+ERGFD +I V G+DH GY+ R+ A A+ + ++ Sbjct: 346 VVRRANGLTTYFASDIAYHKNKFERGFDTVINVWGADHHGYIARVRAALTALGIDEKRLE 405 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 V+L + V L+R I+MS R+G F+TLR + +EVG+D+ RF + RK +DFD Sbjct: 406 VILVQFVALWRGEEKIQMSSRSGKFVTLRELREEVGNDAARFYYVARKPEVHIDFDLELA 465 Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 K QSK+N V+Y+QYA+AR S+ + D+D + Q +E +LI L Sbjct: 466 KSQSKDNAVYYIQYAHARVCSVLEKLAAKGFDVD---DAQGSAQQHLLTADAESELIKLL 522 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA----NNRKLTMM 558 A YP ++ A +P+ L YL DLAS+FH ++ R P + Sbjct: 523 AAYPATLKRAATGYDPHVLTNYLKDLASLFHAWYNDNRILPVSIIADETPSQEELDMMQA 582 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 RL+L AV ++ +GL+++G+ +P M Sbjct: 583 RLRLSKAVRQVLANGLSLLGLSAPTSM 609 >gi|78484543|ref|YP_390468.1| arginyl-tRNA synthetase [Thiomicrospira crunogena XCL-2] gi|109895050|sp|Q31J79|SYR_THICR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|78362829|gb|ABB40794.1| arginyl-tRNA synthetase [Thiomicrospira crunogena XCL-2] Length = 592 Score = 530 bits (1365), Expect = e-148, Method: Composition-based stats. Identities = 197/618 (31%), Positives = 315/618 (50%), Gaps = 67/618 (10%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 + L + + + ++ R+ +E RD +HG +TN AM+L++ +G P +A Sbjct: 4 QVAEILSKVIDQFKQEGVLDASFQPRVNVENTRDKSHGDFATNLAMMLTKVVGKPPREVA 63 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 E+IVAR+ ++ V IAG GFIN ++ +L SI+ +G +G +G+G V + Sbjct: 64 EMIVARLPESDVIEKVEIAGPGFINFFVLDVAKFDVLPSILEAGETFGECNVGQGRSVLV 123 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 E+VSANPTGP+HVGH R A G ++ASL++ +G+ V+REYY+NDAG Q++ LA S + RY Sbjct: 124 EYVSANPTGPLHVGHGRGAAYGASVASLLSKAGFRVSREYYVNDAGRQMDILAASTWLRY 183 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE------------------- 226 Q + P Y G Y+ + + L ++ L E Sbjct: 184 LQHC-GEELTFPSNGYKGDYIFDIAQSLYEEKGDALRKPAENVFEGVADDEVTTADGETL 242 Query: 227 -------------------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 ++ +V D ++ A++ IR+DL ++ + + SE Sbjct: 243 GDKEKHIDDLIEKTKVLLGDEHYRVVFDKALDAILGDIREDLAEFGVEFENWFSERSL-- 300 Query: 268 GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKS 327 D I ++ L G +YE + L F+S+ GD+ DR +++ Sbjct: 301 MDSGVIDAALEKLQAAGKIYE----------------KKGALWFKSSEYGDEKDRVVVRE 344 Query: 328 DGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCE 387 +G TYFA+D+AY K ERGFD +I + GSDH GYV R++A A+ + VLL + Sbjct: 345 NGLKTYFASDIAYHFNKLERGFDVLIDIWGSDHHGYVPRVKAAMQALDTNPEALEVLLVQ 404 Query: 388 LVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 LYR G + MS R+G F+TLR + DEVG+D+ RF + RK+ + +DFD K +S Sbjct: 405 FAVLYRGGEKLAMSTRSGQFVTLRELRDEVGADAARFFYVQRKSEQHMDFDLDLAKSKSN 464 Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPR 507 ENPV+Y+QYA+AR + A++ LD ++ + E L LA+YP Sbjct: 465 ENPVYYIQYAHARICQVLSLAEERGYQLDTEM---GLANLNRLTQEPEADLATLLAKYPE 521 Query: 508 VIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 +I A +A EP+++A+YL +LA H +++ + L RL LV AV Sbjct: 522 IIARAALAYEPHQIAYYLKELAHGLHAYYNSTQF-------IVEYEPLRNARLTLVVAVR 574 Query: 568 SIINSGLNIIGVESPNEM 585 ++ +GL ++ V +P +M Sbjct: 575 QVLQNGLKLLSVAAPEKM 592 >gi|326390823|ref|ZP_08212375.1| arginyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200] gi|325993082|gb|EGD51522.1| arginyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200] Length = 562 Score = 530 bits (1365), Expect = e-148, Method: Composition-based stats. Identities = 199/591 (33%), Positives = 323/591 (54%), Gaps = 38/591 (6%) Query: 2 YLFADFSSRLKN----YLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL 57 + +K+ ++ + + +++ I IE P++ HG L+ N AM++++ Sbjct: 3 NIIQKVKDEIKDMVTTAIENSVKEGLMNIEVIPEIEIEEPKEKQHGDLAINTAMVMAKQA 62 Query: 58 GLDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116 + P IAE+IV+++ + ++ + IAG GFIN +L +L + L + G +YGR Sbjct: 63 KMPPKKIAEIIVSKMDPSNTFIERIEIAGPGFINFFLKDKFLEETLKLVYERGKDYGRVN 122 Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176 IG G KV +EFVSANPTGPMH+G+ R +GD LAS++ ++GY+VTRE+YINDAG QI Sbjct: 123 IGNGKKVQVEFVSANPTGPMHMGNARGGALGDALASVLDYAGYDVTREFYINDAGNQIEK 182 Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236 S+ RY Q L +++PEG Y G + +E + Y + + P E+ + +Y Sbjct: 183 FGYSLEARYLQLL-GIPAEVPEGGYHGEDIIDRAREFLEIYGDKYKDVPSEERRKALIEY 241 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 ++ ++ I++DL I++D++ SE + D + +I+ L ++GY YE Sbjct: 242 GLKKNLEKIKEDLALYGIEYDVWFSEQSLY--DSGEVYKVIEELKQKGYTYE-------- 291 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355 L F+ T+ G + D L++S+G TY A+D+AY K K+ RGFD +I V Sbjct: 292 --------KDGALWFKMTLFGAEKDDVLVRSNGFPTYLASDIAYHKNKFITRGFDWVINV 343 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 G+DH G+V ++ A+ +++V+L +LV+L G +KMSKR G +TLR ++D Sbjct: 344 WGADHHGHVAPMKGAMQALGIDPDRLDVVLMQLVKLIEGGQVVKMSKRTGRMVTLRDLID 403 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 EVG D+ RF R +DFD KEQS ENPVFYVQYA+AR SI RQ ++ + Sbjct: 404 EVGKDAARFFFNLRSADSPIDFDLDLAKEQSNENPVFYVQYAHARICSIIRQLEEEGVKI 463 Query: 476 D-FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 D D +++ +E E + + A +P I A P+++ Y+ D+AS+FH Sbjct: 464 DNIDEVDLSLLKEEEEKELIKKL-----AYFPEEITIAAKTLAPHRITRYVLDVASLFHS 518 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ R V+ L R L+ AV ++I + L+I+ + +P M Sbjct: 519 FYNSHR-------VKGVEEDLMKARFVLILAVKTVIKNALDILKITAPERM 562 >gi|258652303|ref|YP_003201459.1| arginyl-tRNA synthetase [Nakamurella multipartita DSM 44233] gi|258555528|gb|ACV78470.1| arginyl-tRNA synthetase [Nakamurella multipartita DSM 44233] Length = 551 Score = 529 bits (1364), Expect = e-148, Method: Composition-based stats. Identities = 188/580 (32%), Positives = 285/580 (49%), Gaps = 30/580 (5%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 + ++ L + ++ I ++RP+ HG +T AM L++ P IA Sbjct: 2 QLADAVRRALTSAVAAGDLAVEVPADIPLDRPKSREHGDYATPVAMKLAKAAHRPPRQIA 61 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 E+I A + +P + V IAG GF+N+ + + ++ IV G YG G +VN+ Sbjct: 62 EIIAAHLADEPGIAGVSIAGPGFLNISVETAAAASLVGRIVADGAAYGHGDALAGRQVNL 121 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+H+G R A VGD L +++ G V REYY NDAGAQI+ A S+ Sbjct: 122 EFVSANPTGPIHIGGARWAAVGDALGRILSTQGATVIREYYFNDAGAQIDRFARSLLAAA 181 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245 +Q PE Y G Y+ + + + P+++ + + V+ M I Sbjct: 182 RQQ------PAPEDGYGGDYIVEIAGRITA-ANPGAPQLPDDQATELYRAQGVELMFDEI 234 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 + L D++ E+ H + + + L G++ + Sbjct: 235 KATLHTFRTDFDVYFHENSLH--ESGAVGQAVQRLKDSGHL----------------TFN 276 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365 S GDD DR ++KSDG Y A DLAYF K RGFD IY++G+DH GY+ Sbjct: 277 DGAWWLNSKAYGDDKDRVVIKSDGQPAYIAGDLAYFLDKRARGFDLCIYMLGADHHGYIA 336 Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425 RL+A AAA + + VL+ ++V L RDG PI+MSKRAG ITL +++ +G D+ R+ Sbjct: 337 RLKAAAAAFGDDPDVVEVLIGQMVNLVRDGEPIRMSKRAGTVITLDDLIEALGVDAARYA 396 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 ++ LD D Q+ +NPVFYVQYA+AR S+ R A D+ ++ L Sbjct: 397 LIRYSVDTTLDLDLDLWTRQTSDNPVFYVQYAHARLASLARNAADLG--IELGLRSGGAY 454 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 E +LI LA +P V+ A +EP+++A YL DLAS +H + R P Sbjct: 455 DPALLDTARESELIALLAAWPGVLATAAELREPHRVARYLEDLASGYHKFYDSVRVLPMG 514 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 T+ RL L A ++ +GL ++GV++P M Sbjct: 515 ---DEEAGPATIARLWLCAATRQVLANGLAVLGVDAPERM 551 >gi|73539833|ref|YP_294353.1| arginyl-tRNA synthetase [Ralstonia eutropha JMP134] gi|109895024|sp|Q477C4|SYR_RALEJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|72117246|gb|AAZ59509.1| arginyl-tRNA synthetase [Ralstonia eutropha JMP134] Length = 595 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 193/615 (31%), Positives = 293/615 (47%), Gaps = 64/615 (10%) Query: 9 SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68 S L + + L + ERP+ AHG L+ N AM ++R L +P +A+ I Sbjct: 7 SNLAAAFTDAVRALAPADAALPAVTFERPKAAAHGDLACNIAMQVARALKSNPRELAQRI 66 Query: 69 VARIKIDPDVDSV----FIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 VA ++ DP + IAG GFINL L+P+ +L +++ G YG G V Sbjct: 67 VAMVQADPRAAELVAGMEIAGPGFINLRLTPAAKADVLRAVLSEGDGYGAQERGMHGNVL 126 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGP+HVGH R A +GD LA+L+++ GY+V RE+Y NDAG QI LA+SV R Sbjct: 127 VEFVSANPTGPLHVGHGRQAALGDALANLLSWQGYDVHREFYYNDAGVQIQNLAVSVQAR 186 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPIVKDYSV 238 + D++ PE Y G Y+ + + + + L ++ ++V Sbjct: 187 TR-GFKPGDANWPEAAYNGDYIGDIAADFLAGKTVSASDGEPVTASGNPEDLDSIRKFAV 245 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + DL+A ++ D + E + + + L +G YE Sbjct: 246 TYLRNEQDIDLQAFGVKFDHYYLESSLYT--DGRVEAAVQGLVGKGKTYES--------- 294 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 L R+T GDD DR + K+DG+YTYF D+AY K+ERGF +I V GS Sbjct: 295 -------EGALWLRTTDDGDDKDRVMKKTDGTYTYFVPDVAYHTTKWERGFTKVINVQGS 347 Query: 359 DHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 DH G + R+ A + K + +L ++V + ++G +K+SKRAG ++T+R +++ Sbjct: 348 DHHGTIARVRAGLQGLDIGIPKGYPDYVLHKMVTVMKNGEEVKISKRAGSYVTVRDLIEW 407 Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 G D+VRF +L RK FD +Q+ ENPV+ Sbjct: 408 SNGGDETIRGCLDAGVADWPEHFTRGRDAVRFFLLSRKADTEFVFDVDLALKQNDENPVY 467 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD--TSELQLIVHLAEYPRVIE 510 YVQYA+AR SIF + + + D L L LAE+P ++ Sbjct: 468 YVQYAHARICSIFESWGGADWESRLAELAGTDLAAVTGADASPQALALGQRLAEFPEMLA 527 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A P+ +AFYL DLA FH ++ R V ++ + RL L+ A ++ Sbjct: 528 AAAGELAPHAVAFYLRDLAGDFHAFYNADR-------VLVDDEAVKRARLALLAATRQVL 580 Query: 571 NSGLNIIGVESPNEM 585 +GL +IGV +P M Sbjct: 581 RNGLAVIGVSAPRRM 595 >gi|307265113|ref|ZP_07546673.1| arginyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919911|gb|EFN50125.1| arginyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1] Length = 562 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 199/591 (33%), Positives = 324/591 (54%), Gaps = 38/591 (6%) Query: 2 YLFADFSSRLKN----YLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL 57 + +K+ +K + + +++ I IE P++ HG L+ N AM++++ Sbjct: 3 NIIQKVKDEIKDMVTIAIKNSVKEGLMNIEVIPEIEIEEPKEKQHGDLAINTAMVIAKQA 62 Query: 58 GLDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116 + P IAE+IV+++ + ++ + IAG GFIN +L +L + L + G +YGR Sbjct: 63 KMPPKKIAEIIVSKMDPSNTFIERIEIAGPGFINFFLKDKFLEETLKLVYERGKDYGRVN 122 Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176 IG G KV +EFVSANPTGPMH+G+ R +GD LAS++ ++GY+VTRE+YINDAG QI Sbjct: 123 IGNGKKVQVEFVSANPTGPMHMGNARGGALGDALASVLDYAGYDVTREFYINDAGNQIEK 182 Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236 S+ RY Q L +++PEG Y G + +E + Y + + P E+ + +Y Sbjct: 183 FGYSLEARYLQLL-GIPAEVPEGGYHGEDIIDRAREFLEIYGDKYKDAPSEERRRALIEY 241 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 ++ ++ I++DL I++D++ SE + D + +I++L ++GY YE Sbjct: 242 GLKENLEKIKEDLALYGIEYDVWFSEQSLY--DSGEVHKVIEDLKQKGYTYE-------- 291 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355 L F+ T+ G + D L++S+G TY A+D+AY K K+ RGFD +I V Sbjct: 292 --------KDGALWFKMTLFGAEKDDVLVRSNGIPTYLASDIAYHKNKFITRGFDWVINV 343 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 G+DH G+V ++ A+ +++V+L +LV+L G ++MSKR G +TLR ++D Sbjct: 344 WGADHHGHVAPMKGAMQALGIDPDRLDVVLMQLVKLIEGGQVVRMSKRTGRMVTLRDLID 403 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 EVG D+ RF R +DFD KEQS ENPVFYVQYA+AR SI RQ ++ + Sbjct: 404 EVGKDAARFFFNLRSADSPIDFDLDLAKEQSNENPVFYVQYAHARICSIIRQLEEEGVKI 463 Query: 476 D-FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 D D +++ +E E + + A +P I A P+++ Y+ D+AS+FH Sbjct: 464 DNIDEVDLSLLKEEEEKELIKKL-----AYFPEEITIAAKTLAPHRITRYVLDVASLFHS 518 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ R V+ L R L+ AV ++I + L+I+ + +P M Sbjct: 519 FYNSHR-------VKGVEEDLMKARFVLILAVKTVIKNALDILKITAPERM 562 >gi|262377144|ref|ZP_06070369.1| arginyl-tRNA synthetase [Acinetobacter lwoffii SH145] gi|262307882|gb|EEY89020.1| arginyl-tRNA synthetase [Acinetobacter lwoffii SH145] Length = 596 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 184/629 (29%), Positives = 315/629 (50%), Gaps = 77/629 (12%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L + + + + + + + R +D +HG ++N AMI S+ G+ Sbjct: 1 MN--TAIQAALDHAVHTLQAQGVLPSDWNNTSNLTRTKDRSHGDFASNIAMIASKAAGMK 58 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE I+A + D+ IAG GFIN +L+ +L I YGR + Sbjct: 59 PRDLAEKILAALPEVADISKAEIAGPGFINFFLNADQRFAVLDQIQAQQATYGRTQVNAD 118 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 ++ +EFVSANPT +HVGH R A G T+A+L+ +G +V REYY+NDAG Q++ LA S Sbjct: 119 KRIQVEFVSANPTSSLHVGHGRGAAYGMTVANLLEATGAKVDREYYVNDAGRQMDILATS 178 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL--------NFPEEKWLP- 231 + RY + L + P+ Y G Y+K + + + D+ + + PE+ Sbjct: 179 TYLRYLE-LTGQELVFPKNAYQGDYVKEIAQSIIDQDGDAYVRPVADVYKDVPEDVQFAA 237 Query: 232 -----------------------------------IVKDYSVQAMMKIIRDDLKALNIQH 256 + +++A++ I+DDL + Sbjct: 238 ELDADGNKVVLSGDKEKHIDGLIFNSQALIGTGYRVFLQAALKAILDDIKDDLGEFGVTF 297 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 + + SE+ I + + L ++G++YE + F+ST Sbjct: 298 NQWFSEESL----TDKIEEALQTLDQRGFLYEL----------------DGNIWFKSTAF 337 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GD+ DR + + +G TYFA+D+AY K +RG+ ++I + GSDH GY+ R++A A+ Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDIIDIWGSDHHGYIARVKAAIDALGY 397 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 ++ VLL + V L+R G ++MS R+G F+TLR + EVG+D+ RF + RK+ + +D Sbjct: 398 DSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD QSK+N V+Y+QYA+AR + +A +++FD + + E D +E Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARICRMLEKAA--STNVNFDATAARNLAAKLELD-AET 514 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +++ LA YP ++ A + EP+++ YL +LA++FHG ++ + V ++ +LT Sbjct: 515 EILAKLAAYPEILVRAANSYEPHQIGNYLKELAALFHGWYNDNK-------VLGDDAELT 567 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L V ++ +GL ++GV +P M Sbjct: 568 QARLLLSVNVRQVLRNGLELLGVSAPESM 596 >gi|118594231|ref|ZP_01551578.1| arginyl-tRNA synthetase [Methylophilales bacterium HTCC2181] gi|118440009|gb|EAV46636.1| arginyl-tRNA synthetase [Methylophilales bacterium HTCC2181] Length = 552 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 200/586 (34%), Positives = 306/586 (52%), Gaps = 41/586 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + L + L I K+ + +IVIERP+ HG LS+N A+++++ L P T+A+ Sbjct: 1 MKAHLTDLLFSIVNKM-TSELTQSQIVIERPKSIDHGDLSSNIALVIAKALKKSPRTVAQ 59 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 IV +I + IAG GF+N Y S + KI++ + + YGR+ G K+ IE Sbjct: 60 EIVEKIPSTRSFSKIEIAGAGFLNFYFSSNTHNKIINDALENNKNYGRSNQGSRKKIQIE 119 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+HVGH R A +GD LA L FSG++VTRE+Y NDAG+QI+ L S+ R Sbjct: 120 FVSANPTGPLHVGHGRGAAIGDCLARLFEFSGWDVTREFYYNDAGSQIDNLTKSIKARCM 179 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKY-----SSELLNFPEEKWLPIVKDYSVQAM 241 L D PE Y G Y+ + K K S + + +K+Y + + Sbjct: 180 NVL-PEDPSFPEDGYRGEYISDIAKSYLAKKTIQNGSETFSSNGDTTDDDAIKNYGIHYL 238 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 K DL+A I+ D+F E F+ I+D++ L G+ YE Sbjct: 239 RKEQDQDLEAFKIRFDVFSLESSFY--SQGKIKDVVTTLKNNGHTYE------------- 283 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 L ++T GDD DR + KSDG++TYF D+AY K+ERGF +I G+DH Sbjct: 284 ---KDGALWLKTTAFGDDKDRVMQKSDGAFTYFVPDIAYHLNKWERGFKRVINEQGADHH 340 Query: 362 GYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 V R+ A + +L +++ + ++G +K+SKRAG ++TLR ++DEVG Sbjct: 341 STVNRVRAGLQGLDTGIPPGWPEYVLHQMITVMKNGQEVKISKRAGSYVTLRDLIDEVGC 400 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ ++ R+ L FD K Q+ ENPV+Y+QYA+AR + + Q L Sbjct: 401 DATRYFLIARRADSQLVFDIDLAKSQNNENPVYYIQYAHARIQRVLMQWGGEL----HSL 456 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 E+ E +LI + E+P V+E AT P+++A YL + A+ HG+++ Sbjct: 457 RSTAEYKYETLL---EKKLIKKIEEFPEVVEAATNDLAPHQIANYLKECAADLHGYYND- 512 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +F+ NN + RL L+ A II +GLN++G+ +P+ M Sbjct: 513 -----TKFLVENNNE-KNGRLSLIFATQHIIKTGLNLLGISAPDSM 552 >gi|312876814|ref|ZP_07736792.1| arginyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A] gi|311796433|gb|EFR12784.1| arginyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A] Length = 561 Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 196/592 (33%), Positives = 323/592 (54%), Gaps = 38/592 (6%) Query: 1 MYLFA----DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRP 56 M L + ++N +K K E + I+IE+P++ +HG +TN AM L+R Sbjct: 1 MNLVKLAKQQIQTVVQNAIKHCIDKGIFELDSIPDIMIEKPKEKSHGDFATNIAMELTRK 60 Query: 57 LGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115 L +P IA+ I++ + + + ++ V +AG GFIN + +L K++ I+ G +YG+ Sbjct: 61 LKKNPREIAQSILSSVDLSNTFIEKVEVAGPGFINFFFKKDWLYKVVDVILSEGDDYGKV 120 Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175 IG G KV +EFVSANPTGPMH+G+ R +GD LA+L+ ++GY VT+E+Y+NDAG QI Sbjct: 121 NIGNGKKVMVEFVSANPTGPMHMGNARGGALGDCLANLLKWAGYNVTKEFYVNDAGNQIE 180 Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235 S+ RY+Q L + +LPE Y G + KE D++ +L N ++ + D Sbjct: 181 KFGQSLEIRYRQ-LKGENIELPEDCYHGEDIIERVKEYLDEHGDDLENLSSDERREKLVD 239 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 ++++ + ++++ L+ I++D++ E + + + + I++L +GY YE Sbjct: 240 FALKRNISLMKEHLRKYGIEYDVWFHESSLY--ESGEVFETIEDLKSRGYTYE------- 290 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDD-VDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMI 353 L F ++ + + D L++++G TYFAAD+AY + K+E RGFD +I Sbjct: 291 ---------KDGALWFAASKIDESLKDEVLIRANGIPTYFAADIAYHRNKFEKRGFDIVI 341 Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 + G+DH G+V R++A A+ ++ V+L +LVRL R ++MSKR G ITL + Sbjct: 342 DIWGADHHGHVARMKAAMKALGIDPERLIVILMQLVRLVRGKEIVRMSKRTGKAITLIDL 401 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 +DE+G D+ RFM + ++ D V +Q+ +NPVFYVQYA+AR I R + Sbjct: 402 IDEIGKDAARFMFNTKSADTHIEIDLDLVTQQTLDNPVFYVQYAHARTCGILRALSEEGI 461 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 LD ++ QE E + + L + IE A + ++ YL DLAS+FH Sbjct: 462 VLDKSKIKVELLQQEEELELLKKLLELP-----EEIEIAAKNLDVSRVTKYLLDLASMFH 516 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ R V+ N L RL LV V +I + L ++GV++P +M Sbjct: 517 AFYNACR-------VKNENEDLMFTRLSLVECVRIVIKNMLRLLGVDAPEKM 561 >gi|146296397|ref|YP_001180168.1| arginyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409973|gb|ABP66977.1| arginyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 562 Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 194/593 (32%), Positives = 327/593 (55%), Gaps = 39/593 (6%) Query: 1 MYLFADFSSRLKNYLKE-----IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSR 55 M L ++K+ +++ I+ I ++ I+IE+P++ AHG +TN AM L+R Sbjct: 1 MNLVKLAKDQIKDTIEKAINTCIEKGIFQLNYVVPPIMIEKPKEKAHGDFATNIAMELTR 60 Query: 56 PLGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGR 114 L +P IA+ IV I + + ++ V +AG GFIN + +L K++ I+ G YGR Sbjct: 61 KLKKNPREIAQNIVDNIDLTNTLIEKVEVAGPGFINFFFKKEWLYKVVDVILSEGDGYGR 120 Query: 115 NLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQI 174 IG G KV +EFVSANPTGPMH+G+ R +GD LA+L+ ++GY+VT+E+Y+NDAG QI Sbjct: 121 VDIGNGKKVMVEFVSANPTGPMHMGNARGGALGDCLANLLKWAGYKVTKEFYVNDAGNQI 180 Query: 175 NTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVK 234 S+ RY+Q L + +LPE Y G + KE ++ +L P E+ + Sbjct: 181 EKFGQSLEIRYRQ-LKGENIELPEDCYHGDDIIERVKEYLNENGDDLEGLPSEERRRKLV 239 Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294 +++++ + ++++ L+ I++D++ E + + + + I++L R G+ YE Sbjct: 240 EFALKRNIALMKEHLQKYGIEYDVWFHESSLY--ESGEVYETIEDLKRHGFTYE------ 291 Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDD-VDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNM 352 + F ++ + ++ D L++++G TYFAAD+AY + K+E RGFD + Sbjct: 292 ----------KDGAVWFAASKLDENLKDEVLIRTNGIPTYFAADIAYHRNKFEKRGFDIV 341 Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412 I + G+DH G+V R++A A+ ++ ++L +LVRL R ++MSKR G ITL Sbjct: 342 IDIWGADHHGHVPRMKAAMKALGIDPERLVIILMQLVRLVRGKEIVRMSKRTGKAITLID 401 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 +++E+G D+ RFM + ++ D V +Q+ +NPVFYVQYA+AR I R + Sbjct: 402 LIEEIGKDAARFMFNTKSADTHIEIDLDLVTQQTLDNPVFYVQYAHARTCGILRALSEEG 461 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 L+ D ++ QE E + + L + IE A + ++ YL DLAS+F Sbjct: 462 IVLNRDKIKLELLQQEEELELLKKLLELP-----EEIEIAARNLDVSRVTKYLLDLASIF 516 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H ++ R V+ + +L RL LV V +I + L ++GV++P +M Sbjct: 517 HAFYNACR-------VKNESEELMHTRLSLVECVRIVIKNVLTLLGVDAPEKM 562 >gi|15643850|ref|NP_228899.1| arginyl-tRNA synthetase [Thermotoga maritima MSB8] gi|7674352|sp|Q9X0H8|SYR_THEMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|4981637|gb|AAD36169.1|AE001768_18 arginyl-tRNA synthetase [Thermotoga maritima MSB8] Length = 546 Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 183/579 (31%), Positives = 288/579 (49%), Gaps = 34/579 (5%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + ++ + E+ K +E P G LSTN AM L++ L +P IA+ Sbjct: 2 LVNAIRQKVSEVISK---AYGSEIEFEVEIPPRKEFGDLSTNVAMKLAKTLKKNPREIAQ 58 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 IV + DP D + I G GFIN +LS LR ++ +++ EYGR +G G KV E Sbjct: 59 EIVKSLDEDPSFDRIEIMGPGFINFFLSNELLRGVVKTVLEKKDEYGRENVGNGMKVQFE 118 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 + SANPTGP VGH R ++GD L+ + GY+VTRE YINDAG QI LA S++ RY Sbjct: 119 YGSANPTGPFTVGHGRQIIIGDVLSEVYKELGYDVTREMYINDAGKQIRLLAQSLWARYN 178 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 Q L + ++PEG Y G YL + ++L ++ + E+ K ++ ++ ++ Sbjct: 179 QLL-GVEKEIPEGGYRGEYLVDIARDLVNEIGDRYKDLWNEEVEEFFKQTALNRILSSMK 237 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 D L+ + D++ SE + + +++ L + VYE Sbjct: 238 DTLEKIGSSFDVYFSEKSL--IEDGTVEEVLKLLKNKDVVYE----------------KD 279 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366 + + + D+ D+ L++SDG+YTYF D+AY KY+RGF + + GSDH G++ R Sbjct: 280 GAVWLKVSAFIDEEDKVLVRSDGTYTYFMTDIAYHYKKYKRGFRKVYDIWGSDHHGHIPR 339 Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 ++A A+ NV+L + V L R G ++MS RAG+F+TL ++DEVG D+ R+ Sbjct: 340 MKAAMKALDIPDDFFNVILHQFVTLKRGGEIVRMSTRAGEFVTLDELLDEVGRDATRYFF 399 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 + + FD K +S +NPV+YVQYA+AR ++F A+ + Sbjct: 400 AMVDPNTHMVFDIDLAKAKSMDNPVYYVQYAHARIHNLFSNAEKKGVKFEEGK------H 453 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 E + E L+ +L + ++ P +L YL LA FH ++ Sbjct: 454 LELLGNEEERVLMRNLGMFNTALKEVAQMFAPNRLTNYLQSLAESFHAFYTKH------V 507 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V N +L+ RL L A ++ GL +IGV +P M Sbjct: 508 IVDPENPELSNARLNLALATGIVLRKGLKLIGVSAPERM 546 >gi|218283277|ref|ZP_03489332.1| hypothetical protein EUBIFOR_01921 [Eubacterium biforme DSM 3989] gi|218215967|gb|EEC89505.1| hypothetical protein EUBIFOR_01921 [Eubacterium biforme DSM 3989] Length = 544 Score = 528 bits (1360), Expect = e-147, Method: Composition-based stats. Identities = 199/579 (34%), Positives = 303/579 (52%), Gaps = 38/579 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 LK ++ K + IV+E P++ HG S+N AM L+R L +P IA+ Sbjct: 4 IEVELKQAIQIAVKKAFDLDLDVQNIVVETPKNKDHGDFSSNVAMQLTRQLHQNPRMIAQ 63 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 ++ + V ++ IAG GF+N LS ++S ++ YG+ G KV++E Sbjct: 64 SLLDAFSL-EMVSNIEIAGPGFLNFTLSKDRFSTVISDVLAQKENYGQQ-PSNGIKVDLE 121 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 +VSANPTG +H+GH R A GD+ A +M +GY+VTREYY+NDAG QI LALS+ RY+ Sbjct: 122 YVSANPTGSLHLGHARGAAWGDSCARIMKKAGYDVTREYYVNDAGNQITNLALSLNARYR 181 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 QA +++ + Y G ++ G ELA +Y L P E+ L + ++ + IR Sbjct: 182 QA-QGIPTEIGQDGYMGKDVEEKGYELAKEYPETYLE-PTEENLKFFRKEGIKFELDKIR 239 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 DL + D++ SE D + I+ L +GYVYE Sbjct: 240 KDLDRYRVHFDVWSSEQSI--RDAGKVEAAINELNEKGYVYE----------------KD 281 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366 L F +T GDD DR L K DGS TY D+AY K +RGFD ++ G+DH GY+ R Sbjct: 282 GALWFETTKFGDDKDRVLRKQDGSLTYLVPDIAYHNDKCQRGFDMLVDFFGADHHGYIPR 341 Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 L+A A+ +++V + ++VRL +G +KMSKR G+ T+ + D+VG D+ R+ Sbjct: 342 LKASMTALGNDADKLHVDIIQMVRLVSNGEEMKMSKRLGNATTINELCDKVGVDAARYFF 401 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 + R LDFD ++S ENPV+Y QYA+AR SI +QA+DI F Sbjct: 402 VQRALDSHLDFDIELATKKSNENPVYYAQYAHARMCSIQKQAQDIELATSF--------- 452 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 E + E++L+ L E+ +VI +++ +K+ Y+ +LAS FH ++ + Sbjct: 453 -EDLTNEKEIELMKSLQEFNKVIVETAQSRQVHKMCHYIQNLASKFHSFYN------VCK 505 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V +N +L+ RL LV A ++ + L IGVE+ M Sbjct: 506 VVDRDNLELSSQRLALVKATQIVLANALECIGVEAVESM 544 >gi|149927068|ref|ZP_01915326.1| arginyl-tRNA synthetase [Limnobacter sp. MED105] gi|149824289|gb|EDM83509.1| arginyl-tRNA synthetase [Limnobacter sp. MED105] Length = 579 Score = 528 bits (1360), Expect = e-147, Method: Composition-based stats. Identities = 191/584 (32%), Positives = 296/584 (50%), Gaps = 63/584 (10%) Query: 32 IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV----DSVFIAGKG 87 + +E+P+D +HG ++ N AM L++P +P +A+L+ +K +P D+V IAG G Sbjct: 29 VTLEKPKDASHGDVACNLAMQLAKPAKRNPRELAQLLADHVKANPACVSLVDAVDIAGPG 88 Query: 88 FINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVG 147 FIN+ LS + +++ ++ G E+G++ G V IEFVSANPTGP+HVGH R A +G Sbjct: 89 FINIRLSQNARVAVVAQVLEQGTEFGKSGAHAGETVLIEFVSANPTGPLHVGHGRQAALG 148 Query: 148 DTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLK 207 D +A++M G++V +E+Y NDAG QI TLA SV R + L D + PE Y G Y+ Sbjct: 149 DAMAAVMQTQGWKVHKEFYYNDAGVQIQTLATSVQAR-AKGLKPGDVEWPESAYNGDYIA 207 Query: 208 HVG------KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFIS 261 + KE+ + ++ ++V + DLKA + D F Sbjct: 208 DIAEDFLAGKEVKAADGEPVKGTGNVDDFECIRAFAVAYLRAEQDLDLKAFGVNFDQFYL 267 Query: 262 EDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVD 321 E + + + + G +E + L RST GDD D Sbjct: 268 ESSLY--SEGKVEAAVALMVASGKTFE----------------EGGALWLRSTDYGDDKD 309 Query: 322 RPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKA 379 R + KS+G YTYF D+AY K++RGF +I + G+DH G + R+ A A V + Sbjct: 310 RVMRKSEGGYTYFVPDVAYHIQKFKRGFGKVINIQGTDHHGTIARVRAGLQACNVGIPQG 369 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV------DEV------------GSDS 421 + +L ++V + + G +K+SKRAG ++T+R ++ DE G D+ Sbjct: 370 YPDYVLHKMVTVMKGGQEVKISKRAGSYVTVRDLICWSGGVDETQPMLSQPEALTKGRDA 429 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 VRF ++ RK FD QS ENPV+YVQYA+AR SI QA+ DL Sbjct: 430 VRFFLVSRKADTEFVFDVDLALAQSDENPVYYVQYAHARIHSILDQAE-------VDLST 482 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + SEL L+ L YP ++ A P+ +AFYL +LA FH ++ R Sbjct: 483 IHGADLTLLAAPSELALLRTLVSYPDILSKAAEELAPHHIAFYLRELAGAFHTFYNAER- 541 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V+ ++ L R+ L+ AVA+++++GL ++GV +P M Sbjct: 542 ------VRIDDMALKTARVGLLVAVATVLSNGLAVLGVSAPKRM 579 >gi|221194653|ref|ZP_03567710.1| arginyl-tRNA synthetase [Atopobium rimae ATCC 49626] gi|221185557|gb|EEE17947.1| arginyl-tRNA synthetase [Atopobium rimae ATCC 49626] Length = 613 Score = 528 bits (1360), Expect = e-147, Method: Composition-based stats. Identities = 186/633 (29%), Positives = 312/633 (49%), Gaps = 70/633 (11%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + ++ L + + + + ++ + +ERP D ++G ++ AM +R P Sbjct: 1 MREKIEQLVRKALADAQAQGDLPQFEVEDLGLERPADASNGDWTSTVAMRSARLAHKSPR 60 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 IA +VA + P+++ V IAG GF+N YLS + +I +I G ++G++ GKGTK Sbjct: 61 DIAAALVAHMSDVPEIERVEIAGPGFVNFYLSTAAGNEIFRTIREQGADFGKSDFGKGTK 120 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 + +E++SANP GP+HVGH R A +GD+L + +GY+V REYYIND G+Q++ S+ Sbjct: 121 IQVEYISANPVGPLHVGHGRWAALGDSLCRVFEHAGYDVEREYYINDHGSQMDVFGSSIS 180 Query: 183 WRYQQA-------------------------LYNNDSDLPE--------------GYYPG 203 RY Q + + D PE Y G Sbjct: 181 KRYLQLNEIMAQKNVELQEAYQMLLDDREAFIEDEDDSRPETHPYMDAFNESLGGNAYGG 240 Query: 204 VYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 Y+ + K ++ ++ E+ + ++ + M++ I+ D++ SE Sbjct: 241 DYIIDLAKRFCEENGDAWVSASEDDRMADFRERGYKLMLESIKATCHNARSDFDVWFSER 300 Query: 264 DFH---RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 + S + ++ L GY+Y + L FRST GDD Sbjct: 301 SLYVPDENGKSAVDRALETLDGMGYLYH----------------EDGALFFRSTKFGDDK 344 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR L+KS+G YTYFA+D+AY K++R D++I + G+DH GY++R+++V A+ Q Sbjct: 345 DRVLIKSNGEYTYFASDVAYHWNKFQR-VDHVIDIWGADHHGYIQRVDSVCTALGF-PGQ 402 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 VLL + V L R+G P+KMSKR G I ++ EV D+ R+ ++ + +++++DFD Sbjct: 403 FEVLLGQFVNLLRNGTPVKMSKRKGTGIPFDELLGEVSVDATRYTLMSKSSNQMIDFDIE 462 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQ--------AKDIFPDLDFDLFPRNVIPQESEFD 492 +VK Q NPV+YVQYA+AR SI R+ A+++ D + + Sbjct: 463 QVKRQDSSNPVYYVQYAHARICSILRRGAGVSIEEAQELGMDEVASRAIGDSYDLSLLSE 522 Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552 E L L+E+P ++EN + P+++ Y+ +LAS FHG ++ + P + Sbjct: 523 NVEQALSRKLSEFPTLVENCARDRAPFRITHYVEELASDFHGFYTVCQVLPSESRPL--D 580 Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L+ RL A ++ LN+IGV +P M Sbjct: 581 EDLSRARLAACDATRRVLALALNLIGVSAPQSM 613 >gi|312792767|ref|YP_004025690.1| arginyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312179907|gb|ADQ40077.1| arginyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 561 Score = 528 bits (1360), Expect = e-147, Method: Composition-based stats. Identities = 195/592 (32%), Positives = 323/592 (54%), Gaps = 38/592 (6%) Query: 1 MYLFA----DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRP 56 M L ++N +K K E + I+IE+P++ +HG +TN AM L+R Sbjct: 1 MNLVKLAKQQIQDVVQNAIKNCIDKGIFELDSIPDIMIEKPKEKSHGDFATNIAMELTRK 60 Query: 57 LGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115 L +P IA+ I++ + + + ++ V +AG GFIN + +L K++ I+ G +YG+ Sbjct: 61 LKKNPREIAQSILSSVDLSNTFIEKVEVAGPGFINFFFKKDWLYKVVDVILSEGDDYGKV 120 Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175 IG KV +EFVSANPTGPMH+G+ R +GD LA+L+ ++GY VT+E+Y+NDAG QI Sbjct: 121 NIGNSKKVMVEFVSANPTGPMHMGNARGGALGDCLANLLKWAGYNVTKEFYVNDAGNQIE 180 Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235 S+ RY+Q L + +LPE Y G + KE D++ +L N ++ + D Sbjct: 181 KFGQSLEIRYRQ-LKGENIELPEDCYHGEDIIERVKEYLDEHGDDLENLSSDERREKLVD 239 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 ++++ + ++++ L+ I++D++ E + + + + I++L +GY YE Sbjct: 240 FALKRNISLMKEHLRKYGIEYDVWFHESSLY--ESGEVFETIEDLKSRGYTYE------- 290 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDD-VDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMI 353 L F ++ + ++ D L++++G TYFAAD+AY + K+E RGFD +I Sbjct: 291 ---------KDGALWFAASKIDENLKDEVLIRANGIPTYFAADIAYHRNKFEKRGFDIVI 341 Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 + G+DH G+V R++A A+ ++ V+L +LVRL R ++MSKR G ITL + Sbjct: 342 DIWGADHHGHVARMKAAMKALGIDPERLIVILMQLVRLVRGKEIVRMSKRTGKAITLIDL 401 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 +DE+G D+ RFM + ++ D V +Q+ +NPVFYVQYA+AR I R + Sbjct: 402 IDEIGKDAARFMFNTKSADTHIEIDLDLVSQQTLDNPVFYVQYAHARTCGILRALSEEGI 461 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 LD ++ QE E + + L + IE A + ++ YL DLAS+FH Sbjct: 462 VLDKSRIKVELLQQEEELELLKKLLELP-----EEIEIAAKNLDVSRVTKYLLDLASMFH 516 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ R V+ N +L RL LV V +I + L ++GV++P +M Sbjct: 517 AFYNACR-------VKNENEELMFTRLSLVECVRIVIKNMLRLLGVDAPEKM 561 >gi|303327748|ref|ZP_07358188.1| arginine--tRNA ligase [Desulfovibrio sp. 3_1_syn3] gi|302862109|gb|EFL85043.1| arginine--tRNA ligase [Desulfovibrio sp. 3_1_syn3] Length = 551 Score = 528 bits (1360), Expect = e-147, Method: Composition-based stats. Identities = 205/576 (35%), Positives = 313/576 (54%), Gaps = 32/576 (5%) Query: 11 LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 L+ L I + + + + VIE PRD HG LSTNAAM+L++ +P +A+ A Sbjct: 7 LRTALAAILEEEGLAWPV--KTVIEPPRDPKHGDLSTNAAMLLAKEAKCNPRELAQKFAA 64 Query: 71 RI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129 R+ + PD++ AG GF N+ S ++ R+ + + +G YG + G G KV +E+VS Sbjct: 65 RLLERCPDLEKAEAAGPGFCNVTFSQAFWRRTVLDVEAAGGAYGASGTGAGRKVLLEYVS 124 Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189 ANPTGP+HVGH R A VGD+LA L+ +GY V EYYINDAG Q+ L LSV+ R + L Sbjct: 125 ANPTGPLHVGHGRGAAVGDSLARLLRKAGYAVDTEYYINDAGRQMRLLGLSVWLRVLE-L 183 Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL 249 D PE YY G Y+ + +E+ L + PE + ++ ++ I+ DL Sbjct: 184 AGRPVDWPEDYYRGEYIIDIAREMLA-DDPHLPDLPEAEGQECCYQRAMNEILAGIKADL 242 Query: 250 KALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQL 309 ++H + SE + + L R GY YE Sbjct: 243 NEFRVEHQRWFSEKTLV--ERGAVDAAFTALGRSGYTYE----------------KENAF 284 Query: 310 LFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEA 369 F + +GDD DR L KSDGS TYFA D+AY K+ERG+D +I + G+DH GYV R+ A Sbjct: 285 WFATEQLGDDKDRVLKKSDGSLTYFATDIAYHHDKFERGYDWLIDIWGADHHGYVPRMRA 344 Query: 370 VAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWR 429 A+ + +V+L +LV L RDG P+ MS RAG F TL V+ EVG+D+ RFM L R Sbjct: 345 AITAMGRPRDSFDVVLIQLVNLLRDGKPVSMSTRAGTFETLADVLREVGADAARFMFLSR 404 Query: 430 KNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES 489 K+ LDFD K++S +NPV+YVQYA+AR ++ R+A + L + + ++ Sbjct: 405 KSDSPLDFDLELAKQRSLDNPVYYVQYAHARICAVLRRAGERGVGLPETVTEEMLAGLDT 464 Query: 490 EFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQ 549 ++ L+ A + ++ A A + ++ YL +LA + H +++ + + Sbjct: 465 ---PEDMALLRKAAAFQDMLAAAARALAAHHVSHYLTELAGLLHSYYARHQ------VLL 515 Query: 550 ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A+++ T+ RL L+ AVA ++ +GL+++GV +P M Sbjct: 516 ADDQPRTLARLALLRAVAQVLRNGLDVLGVSAPEAM 551 >gi|319441082|ref|ZP_07990238.1| arginyl-tRNA synthetase [Corynebacterium variabile DSM 44702] Length = 558 Score = 528 bits (1360), Expect = e-147, Method: Composition-based stats. Identities = 184/583 (31%), Positives = 291/583 (49%), Gaps = 30/583 (5%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKI-LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD S + + + ++ I D+ V+ERPR+ HG +TN A+ ++ G +P Sbjct: 4 ADLSVLISGAARTVLTDHGLDPAIVPDQPVVERPRNPEHGDYATNIALQTAKKAGTNPRD 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 + + + VD +AG GFIN+ L+ ++++ I+ +G YG G ++ Sbjct: 64 LGTWLAEALAAADGVDEATVAGPGFINIRLAADAQGRLVTDILTAGDAYGTGDDYTGQRI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++A G +VTREYY ND G QI+ A S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLAARGAQVTREYYFNDHGTQIDRFARSLVA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + ++ + + + + + + I + V M Sbjct: 184 AAK------GEPAPEDGYGGDYIADITDQVI-EATPDWADHSDGEIQEIFRSQGVDLMFA 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L + D+F E+ + + I L G +YE Sbjct: 237 HIKRTLAEFGTEFDVFFHENALF--ESGAVEKAIQTLKDNGNLYEA-------------- 280 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 RS+ GDD DR ++KSDG+ Y A D+AY K +RG D IY++G+DH GY Sbjct: 281 --EGAWWLRSSNFGDDKDRVVIKSDGNAAYIAGDIAYIADKIDRGHDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 V RL+A AAA+ Q+ VL+ ++V L RDG ++MSKRAG ITL +V+ +G D+ R Sbjct: 339 VARLKAAAAALGYNPEQVEVLIGQMVNLVRDGKAVRMSKRAGTVITLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ LD D Q+ +NPVFYVQY +AR S+ R+A++ L DL + Sbjct: 399 YALIRSSVDSSLDIDMDLWTSQTSDNPVFYVQYGHARLCSLGRKAEENGISLPEDL---S 455 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + + E LI L E+P V+ A +EP+++A Y LA FH + + P Sbjct: 456 TLDLGTLTHDREGDLIRTLGEFPDVLATAAELREPHRVARYAEHLAGTFHRFYDSCQILP 515 Query: 544 RLRFVQANN-RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + + RL L +A + + L ++GV +P M Sbjct: 516 KGDDATGEDIAPVFLARLALANAARVTLANALRMVGVSAPERM 558 >gi|221199858|ref|ZP_03572901.1| arginyl-tRNA synthetase [Burkholderia multivorans CGD2M] gi|221207473|ref|ZP_03580482.1| arginyl-tRNA synthetase [Burkholderia multivorans CGD2] gi|221172676|gb|EEE05114.1| arginyl-tRNA synthetase [Burkholderia multivorans CGD2] gi|221180097|gb|EEE12501.1| arginyl-tRNA synthetase [Burkholderia multivorans CGD2M] Length = 598 Score = 527 bits (1359), Expect = e-147, Method: Composition-based stats. Identities = 201/616 (32%), Positives = 308/616 (50%), Gaps = 62/616 (10%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L AD ++ + LK D + I +ERP+ AHG ++ N AM L++PLG +P Sbjct: 12 LLADSVQQVAHALKGADAANAGVAFVAPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 71 Query: 63 TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +AE IVA + P V+S IAG GFINL LS + + ++ +++ G +G + Sbjct: 72 QLAEKIVAALTAQPGAQGLVESAEIAGPGFINLRLSAAAKQAVIGAVLEQGRAFGTSDRE 131 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAGAQI LA Sbjct: 132 KGKRVLLEFVSANPTGPLHVGHGRQAALGDALANVIASQGYAVHREFYYNDAGAQIGNLA 191 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPI 232 +S R + L D+ PE Y G Y+ + ++ A K + + L Sbjct: 192 ISTQARAR-GLKPGDAGWPEAAYNGEYIADIARDYMNGETVAAKDGEPVKGAGDVDDLDA 250 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + + DL+A ++ D + E + + +D L + G YE Sbjct: 251 IRKFAVAYLRREQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALIKAGMTYE---- 304 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L R+T GDD DR + KSDG+YTYF D+AY K+ERGF + Sbjct: 305 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTKV 352 Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 I + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+ Sbjct: 353 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTV 412 Query: 411 RHVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 R +++ G D+VRF ++ RK FD +Q+ EN Sbjct: 413 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 472 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 PV+YVQYA+AR S+ + K + + +L L+ LAEYP ++ Sbjct: 473 PVYYVQYAHARICSVLNEWKSRY---NGELAQLPQADLSQLTSPQAASLMQKLAEYPDML 529 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 +A P+ +AFYL DLA FH ++ R V ++ R L+ A + Sbjct: 530 THAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 582 Query: 570 INSGLNIIGVESPNEM 585 + +GL ++GV +P +M Sbjct: 583 LENGLAMLGVSAPAKM 598 >gi|312621722|ref|YP_004023335.1| arginyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002] gi|312202189|gb|ADQ45516.1| arginyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002] Length = 561 Score = 527 bits (1359), Expect = e-147, Method: Composition-based stats. Identities = 201/592 (33%), Positives = 322/592 (54%), Gaps = 38/592 (6%) Query: 1 MYLFA----DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRP 56 M L ++N +K K E + I+IE+P++ +HG +TN AM L+R Sbjct: 1 MNLVKLAKQQIQDVVQNAIKNCIDKGVFELDSIPGIMIEKPKEKSHGDFATNIAMELTRK 60 Query: 57 LGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115 L +P IA IV+ I + + ++ V +AG GFIN + +L K++ I+ G +YG+ Sbjct: 61 LKKNPREIANGIVSAIDLSNTFIEKVEVAGPGFINFFFRKDWLYKVVDVILTEGDDYGKV 120 Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175 IG G KV +EFVSANPTGPMH+G+ R +GD LA+L+ ++GY VT+E+Y+NDAG QI Sbjct: 121 NIGNGKKVMVEFVSANPTGPMHMGNARGGALGDCLANLLKWAGYNVTKEFYVNDAGNQIE 180 Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235 S+ RY+Q L + DLPE Y G + KE D++ +L N ++ + D Sbjct: 181 KFGQSLEIRYRQ-LKGENIDLPEDCYHGEDIIERVKEYLDEHGDDLENLSSDERRKKLVD 239 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 ++++ + ++++ L+ I++D++ E + + + + I++L +GY YE Sbjct: 240 FALKRNILLMKEHLRKYGIEYDVWFHESSLY--ESGEVFETIEDLKSRGYTYE------- 290 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDD-VDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMI 353 L F ++ + + D L++++G TYFAAD+AY + K+E RGFD +I Sbjct: 291 ---------KDGALWFAASKIDESLKDEVLIRANGIPTYFAADIAYHRNKFEKRGFDIVI 341 Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 + G+DH G+V R++A A+ ++ V+L +LVRL R ++MSKR G ITL + Sbjct: 342 DIWGADHHGHVARMKAAMKALGIDPEKLIVILMQLVRLVRGKEVVRMSKRTGKAITLIDL 401 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 +DE+G D+ RFM + ++ D V +Q+ +NPVFYVQYA+AR I R + Sbjct: 402 IDEIGKDAARFMFNTKSADTHIEIDLDLVTQQTLDNPVFYVQYAHARTCGIIRALSEEGI 461 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 LD ++ QE E + L + IE A + ++ YL DLAS+FH Sbjct: 462 VLDKSRIKVELLQQEEELELLRKLLELP-----EEIEIAARNLDVSRVTKYLLDLASMFH 516 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ R V+ N +L RL LV V +IN+ L ++GVE+P +M Sbjct: 517 AFYNACR-------VKNENEELMFTRLSLVECVRIVINNMLRLLGVEAPEKM 561 >gi|170289501|ref|YP_001739739.1| arginyl-tRNA synthetase [Thermotoga sp. RQ2] gi|238688807|sp|B1L826|SYR_THESQ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|170177004|gb|ACB10056.1| arginyl-tRNA synthetase [Thermotoga sp. RQ2] Length = 546 Score = 527 bits (1359), Expect = e-147, Method: Composition-based stats. Identities = 184/579 (31%), Positives = 288/579 (49%), Gaps = 34/579 (5%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + ++ + E+ K +E P G LSTN AM L++ L +P IA+ Sbjct: 2 LVNAIRQKVSEVISK---AYGSEIEFEVEIPPRKEFGDLSTNVAMKLAKTLKKNPREIAK 58 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 IV + DP D + I G GFIN +LS LR ++ +++ EYGR +G G KV E Sbjct: 59 EIVKSLDEDPSFDRIEIMGPGFINFFLSNELLRGVVKTVLEKKDEYGRENVGNGMKVQFE 118 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 + SANPTGP VGH R ++GD L+ + GY+VTRE YINDAG QI LA S++ RY Sbjct: 119 YGSANPTGPFTVGHGRQIIIGDVLSEVYKELGYDVTREMYINDAGKQIRLLAQSLWARYN 178 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 Q L + ++PEG Y G YL + ++L ++ + E+ K ++ M+ ++ Sbjct: 179 QLL-GVEKEIPEGGYRGEYLVDIARDLVNEIGDRYKDLWNEEVEEFFKQTALNRMLSSMK 237 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 D L+ + D++ SE + + +++ L + VYE Sbjct: 238 DTLEKIGSSFDVYFSEKSL--IEDGTVEEVLKLLKNKDVVYE----------------KD 279 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366 + + + D+ D+ L++SDG+YTYF D+AY KY+RGF + + GSDH G++ R Sbjct: 280 GAVWLKVSAFIDEEDKVLVRSDGTYTYFMTDIAYHYKKYKRGFRKVYDIWGSDHHGHIPR 339 Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 ++A A+ NV+L + V L R G ++MS RAG+F+TL ++DEVG D+ R+ Sbjct: 340 MKAAMKALDIPDDFFNVILHQFVTLKRGGEIVRMSTRAGEFVTLDELLDEVGRDATRYFF 399 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 + + FD K +S +NPV+YVQYA+AR ++F A+ + Sbjct: 400 AMVDPNTHMVFDIDLAKAKSMDNPVYYVQYAHARIHNLFSNAEKKGVKFEEGK------H 453 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 E + E L+ +L + ++ P +L YL LA FH ++ Sbjct: 454 LELLGNEEERVLMRNLGMFNTALKEVAQMFAPNRLTNYLQSLAESFHAFYTKH------V 507 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V N +L+ RL L A ++ GL +IGV +P M Sbjct: 508 IVDPENPELSNARLNLALATGIVLRKGLKLIGVSAPERM 546 >gi|293602808|ref|ZP_06685248.1| arginine--tRNA ligase [Achromobacter piechaudii ATCC 43553] gi|292818824|gb|EFF77865.1| arginine--tRNA ligase [Achromobacter piechaudii ATCC 43553] Length = 561 Score = 527 bits (1359), Expect = e-147, Method: Composition-based stats. Identities = 190/590 (32%), Positives = 303/590 (51%), Gaps = 50/590 (8%) Query: 10 RLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69 +L + ++ + + + +++ERP+ AHG ++TN AM L++P +P +A+ IV Sbjct: 8 QLISLIQAAVAQSLPDAQ--ANVLLERPKVAAHGDVATNVAMQLAKPARRNPRELAQAIV 65 Query: 70 ARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 + P VDS IAG GFINL ++ + + +++++ G YGR G K+ + Sbjct: 66 DALMAAPGARDLVDSAEIAGPGFINLRITAAARQAVIAAVAEQGASYGR-APRSGEKILV 124 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+HVGH R A +GD L L G++VTRE+Y NDAG QI+ LA+SV R Sbjct: 125 EFVSANPTGPLHVGHARQAALGDALCRLYDAIGWDVTREFYYNDAGNQIHNLAISVQARA 184 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELAD------KYSSELLNFPEEKWLPIVKDYSVQ 239 + L D P Y G Y+ + ++ D + L ++ ++V Sbjct: 185 R-GLTTESPDWPADGYKGDYIADIARDFQDGKTIQPSDGEPVTATGNIDNLDDIRVFAVA 243 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 + + DL+A + D + E + + ++ L G+ YE Sbjct: 244 YLRREQDLDLQAFGLAFDNYYLESSLYT--SGRVEATVNALIAGGHTYE----------- 290 Query: 300 QKCDMDRKQLLFRSTMVG--DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 + L R+T +G DD DR + KS+G YTYF D+AY K K+ERGF + + G Sbjct: 291 -----EGGALWLRTTELGTGDDKDRVMRKSEGGYTYFVPDVAYHKAKWERGFHRAVNIQG 345 Query: 358 SDHSGYVKRLEAVAAAVSE--KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 SDH G V R+ A A+ E K + +L ++V++ R G +K+SKRAG ++T+R ++D Sbjct: 346 SDHHGTVARVRAGLQALGEGIPKDYPSYVLHKMVKVMRGGEEVKISKRAGSYVTMRDLID 405 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 VG D+VR+ ++ R+ FD +S ENPV+Y+QYA+AR ++ A P Sbjct: 406 WVGRDAVRYFLIQRRADTEFVFDVDLALSKSDENPVYYIQYAHARISTMINNAG--MPAA 463 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 D +++ SE L+ LAE+P V+ A P+ +AF+L D AS FH Sbjct: 464 DVAAADTSLLTA-----PSEFALMQRLAEFPNVVALAAQDLSPHHIAFWLRDCASDFHAW 518 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ R V ++ L + RL+L ++ +GL ++GV +P M Sbjct: 519 YAAER-------VLVDDVALKLARLRLAATTRQVLANGLELMGVSAPERM 561 >gi|320527004|ref|ZP_08028193.1| arginyl-tRNA synthetase [Solobacterium moorei F0204] gi|320132589|gb|EFW25130.1| arginyl-tRNA synthetase [Solobacterium moorei F0204] Length = 557 Score = 527 bits (1358), Expect = e-147, Method: Composition-based stats. Identities = 191/583 (32%), Positives = 295/583 (50%), Gaps = 33/583 (5%) Query: 4 FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 +DF S++ + ++E ++ +++E PRD G ST+ AM LSR L PL Sbjct: 7 MSDFESKISSAVREAVKQVYDIDADDSILIVETPRDPKMGDYSTSVAMRLSRTLHKSPLD 66 Query: 64 IAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 IA IV ++K + S+ GFIN L L +++++++ +G +YG+N G G Sbjct: 67 IAGPIVEKLKEIYTEASSIEAVKPGFINFRLKKDALAEVINTVINAGDDYGKNNTGAGVN 126 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V +E+VSANPTG +H GH R A GD ++ L SGY RE+Y+NDAG QI L S+ Sbjct: 127 VLVEWVSANPTGDLHCGHARNAAWGDCISRLYEASGYNNYREFYVNDAGNQIVMLGESLI 186 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 RY + LPE Y + + ++A+K + LN + L K V+ + Sbjct: 187 SRYFDH-FGKKYPLPEDGYHAQDIIDIANQIAEKDGDKWLNADSAERLEYFKKTGVELEL 245 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 K I DDLK F E F+ + I D + +A G YE Sbjct: 246 KKIEDDLKIYRCDFQNFQHETFFYENNRKRINDCLTKMADMGLTYE-------------- 291 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 L F+ST GDD DR L KSDG+ +Y D+A K ERG+D++I + G+DH Sbjct: 292 --KDGALWFKSTEYGDDKDRVLRKSDGTLSYLTPDIANHIYKIERGYDHLINLWGADHHS 349 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 YV R+++ A+ + V + ++VR+ DG +KMSKR G+ IT+R + ++VG D+ Sbjct: 350 YVTRMQSALTALGYPDV-LKVDIIQMVRMVEDGKEVKMSKRTGNAITIRELCEDVGVDAA 408 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 R+ + + + +DFD + + NPVFY QYAY+R SI K Sbjct: 409 RWFFVSKDVATHMDFDMKLARSKDNNNPVFYAQYAYSRMHSIMNNPKIPAF--------T 460 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 V + D ELQL+ ++E+P + NA +++P K+ Y+ L ++H +++ R N Sbjct: 461 QVDTYDRLSDEKELQLMKLISEFPIEVANAAASRKPNKITEYIISLVKIYHSYYNSSRVN 520 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + +LT RL LV A + + LN++GVE+P M Sbjct: 521 ------NPEDPELTNQRLGLVKATMITLKNALNLVGVEAPESM 557 >gi|121592776|ref|YP_984672.1| arginyl-tRNA synthetase [Acidovorax sp. JS42] gi|120604856|gb|ABM40596.1| arginyl-tRNA synthetase [Acidovorax sp. JS42] Length = 577 Score = 526 bits (1356), Expect = e-147, Method: Composition-based stats. Identities = 182/597 (30%), Positives = 293/597 (49%), Gaps = 51/597 (8%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 L L + K+ R E P+ AHG L+ AAM L++PL +P + E Sbjct: 14 VKQELLAALADELEKVSPGAG--SRAAFESPKVAAHGDLACTAAMQLAKPLKQNPRALGE 71 Query: 67 LIVARIKIDPDVDS----VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 + A ++ P + IAG GF+N+ L P+ ++++ ++ G +YG +G K Sbjct: 72 QLQAALEATPAFQKWVQAIEIAGPGFLNIRLKPAAKQQVVHEVLAQGAQYGYQPA-RGEK 130 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V +EFVSANPTGP+HVGH R A +GD ++ L A G+ V RE+Y NDAG QI+TL S Sbjct: 131 VLVEFVSANPTGPLHVGHGRQAAIGDAISHLYATQGWSVHREFYYNDAGVQIDTLTKSTQ 190 Query: 183 WRYQQALYNND-------SDLPEGYYPGVYLKHVGKELADKY-----SSELLNFPEEKWL 230 R + +D + L + +Y G Y++ + K + + Sbjct: 191 LRAKGFKPGDDCWPTDADNPLAKNFYNGDYIQDIADAFLAKATVQADDRAFTANGDVEDY 250 Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290 ++ ++V + DL+A N+Q D + E + + + L G YE Sbjct: 251 ENIRQFAVAYLRNEQDKDLQAFNLQFDQYYLESSLYAN--GHVDATVQRLVANGKTYE-- 306 Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350 L +ST GDD DR + K DG+YTYF D+AY K++RGF Sbjct: 307 --------------QDGALWLKSTDYGDDKDRVMRKQDGTYTYFVPDVAYHIQKFQRGFT 352 Query: 351 NMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 ++ + G+DH G + R+ A A V + + +L +VR+ R+G +K+SKRAG ++ Sbjct: 353 KVVNIQGTDHHGTIARVRAGLQAADVGIPQGYPDYVLHTMVRVVRNGEEVKISKRAGSYV 412 Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 TLR +++ D+VRF +L RK FD Q+ +NPV+YVQYA+AR S+ R Sbjct: 413 TLRDLIEWTSKDAVRFFLLSRKPDTEYTFDVDLAVAQNNDNPVYYVQYAHARICSVLRGW 472 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 ++ D+D+ + L++ LA+YP ++ A P+ + FYL DL Sbjct: 473 RE-----DYDVAALRDVDLSPLEGPQAQALMLLLAKYPEMLTAAAAGNAPHDVTFYLRDL 527 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A+ +H ++ R + ++ + RL LV A A ++++GL ++GV +P M Sbjct: 528 AAAYHSYYDAER-------ILVDDEAVKQARLALVAATAQVLHNGLAVLGVSAPARM 577 >gi|281413077|ref|YP_003347156.1| arginyl-tRNA synthetase [Thermotoga naphthophila RKU-10] gi|281374180|gb|ADA67742.1| arginyl-tRNA synthetase [Thermotoga naphthophila RKU-10] Length = 546 Score = 526 bits (1356), Expect = e-147, Method: Composition-based stats. Identities = 185/579 (31%), Positives = 291/579 (50%), Gaps = 34/579 (5%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + ++ + E+ K + +E P G LSTN AM L++ L +P IA+ Sbjct: 2 LVNAIRQKVSEVISKAYGSE---IEFEVEIPPRKEFGDLSTNVAMKLAKTLKKNPREIAK 58 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 IV + DP D + I G GFIN +LS LR ++ +++ EYGR +G G KV E Sbjct: 59 EIVKSLDEDPSFDRIEIMGPGFINFFLSNELLRGVVKTVLEKKDEYGRENVGNGMKVQFE 118 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 + SANPTGP VGH R ++GD L+ + GY+VTRE YINDAG QI LA S++ RY Sbjct: 119 YGSANPTGPFTVGHGRQIIIGDVLSEVYKELGYDVTREMYINDAGKQIRLLAQSLWARYN 178 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 Q L + ++PEG Y G YL + ++L ++ + E+ K ++ ++ ++ Sbjct: 179 QLL-GVEKEIPEGGYRGEYLVDIARDLVNEIGDRYKDLWNEEVEEFFKQTALNRILSSMK 237 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 D L+ + D++ SE + + +++ L + VYE Sbjct: 238 DTLEKIGSSFDVYFSEKSL--IEDGTVEEVLKLLKDRNVVYE----------------KD 279 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366 + + + D+ D+ L++SDG+YTYF D+AY KY+RGF + + GSDH G++ R Sbjct: 280 GAVWLKVSAFIDEEDKVLVRSDGTYTYFMTDIAYHYKKYKRGFRKVYDIWGSDHHGHIPR 339 Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 ++A A+ NV+L + V L RD ++MS RAG+F+TL ++DEVG D+VR+ Sbjct: 340 MKAAMKALDIPDDFFNVILHQFVTLKRDDEIVRMSTRAGEFVTLDELLDEVGRDAVRYFF 399 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 + + FD K +S +NPV+YVQYA+AR ++F A+ + Sbjct: 400 AMVDPNTHMVFDIDLAKAKSMDNPVYYVQYAHARIYNLFSNAEKKGVKFEEGK------H 453 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 E + E L+ +L + V++ P +L YL LA FH ++ Sbjct: 454 LELLGNEEERVLMRNLGMFNTVLKEVAQMFAPNRLTNYLQSLAESFHAFYTKH------V 507 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V N +L+ RL L A ++ GL +IGV +P M Sbjct: 508 IVDPENPELSNARLNLALATGIVLRKGLKLIGVSAPERM 546 >gi|329121651|ref|ZP_08250271.1| arginine--tRNA ligase [Dialister micraerophilus DSM 19965] gi|327468511|gb|EGF13991.1| arginine--tRNA ligase [Dialister micraerophilus DSM 19965] Length = 554 Score = 526 bits (1356), Expect = e-147, Method: Composition-based stats. Identities = 194/586 (33%), Positives = 302/586 (51%), Gaps = 33/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGL 59 M + + ++ ++ K + +E G S+NAAM +R + Sbjct: 1 MEVRDELKELIEKAKLAAVESGELPKGDYPPVQRLELSPKKEFGDYSSNAAMQWARVAHM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE++V I V IAG GFIN +L+ + L I+ G YG Sbjct: 61 APRKIAEILVEHID-SSLVSKTDIAGAGFINFFLAKDTVYAELKKILAKGENYGDLPRND 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 V +E+VSANPTGP+H+GH R A G + +L+ +GY+V EYYINDAG QI+ LAL Sbjct: 120 EEAVLVEYVSANPTGPLHIGHARGAAYGSAMVNLLRSAGYKVLSEYYINDAGNQIDNLAL 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY Q L D+ LPE Y G + + + D+ ++ L EEK + + K+ +++ Sbjct: 180 SVNARYLQLL-GKDAQLPENGYHGHDIIETAQSILDRDGTKYLEMDEEKRIEVFKEVALK 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 + ++ DL N++ D+++SE F+ P + +++D L + G +YE Sbjct: 239 EKLAALKKDLSDFNVEFDVWMSERSFY---PDQVNEVLDILKKNGTLYE----------- 284 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 +T GDD DR +++S+G TYF +D+AY K K ERG+ +I + G+D Sbjct: 285 -----KEDAWWLNTTKDGDDKDRVVIRSNGEPTYFCSDIAYVKNKIERGYHKLIDIWGAD 339 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ R+++ ++ +++L ++V L RDG P+KMSKR G +TLR ++DEVG Sbjct: 340 HHGYIARVKSAMTSLGYNADDFDIMLLQMVTLLRDGKPVKMSKRTGQSVTLRELMDEVGV 399 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D R+ R +DFD K++S ENPV+Y+QYA AR S+F+QAK+ + Sbjct: 400 DVARYFFCSRTLDSQMDFDIDLAKKRSSENPVYYIQYANARVHSLFKQAKENGVKIP--- 456 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + D SEL LI + Y ++ A + P ++A Y Y+LA++FH + Sbjct: 457 -SWEDVDFTVLVDESELDLIKKMEVYHGFLKGAAAERAPQRIATYAYELAALFHHFYRKC 515 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R + KL RL L+ AV ++ L I+GV +P EM Sbjct: 516 R-------ILGEEEKLMQARLGLIRAVGYVLVHALGILGVSAPEEM 554 >gi|296128906|ref|YP_003636156.1| arginyl-tRNA synthetase [Cellulomonas flavigena DSM 20109] gi|296020721|gb|ADG73957.1| arginyl-tRNA synthetase [Cellulomonas flavigena DSM 20109] Length = 560 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 197/591 (33%), Positives = 305/591 (51%), Gaps = 46/591 (7%) Query: 6 DFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + L+ L + + +R+ IERPR HG +TN A+ L++ G +P Sbjct: 5 QLADALRVALVQAVDDGTFALDPAALPERVHIERPRQREHGDWATNVALQLAKKAGSNPR 64 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 AE + R+ P V +V +AG GF+N+ L + ++ IV G YGRN G K Sbjct: 65 AFAEELARRLADVPGVAAVDVAGPGFLNIRLDAAAAGELARGIVEQGAGYGRNATFAGLK 124 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VN+EFVSANPTGP+H+G R A VGD LA ++ SG EVTREYY ND GAQI+ A S+ Sbjct: 125 VNLEFVSANPTGPLHIGGVRWAAVGDALARVLQASGAEVTREYYFNDHGAQIDRFARSLV 184 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY----SSELLNFPEEKWLPIVKDYSV 238 R + + PE Y G Y+ + + + P+ + + V Sbjct: 185 ARAR------GEEAPEDGYGGQYIADIADRVIADAQAAGEPDPRTLPDAEATEAFRARGV 238 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + M I+ L + D++ ED H + + ++ L G+++E Sbjct: 239 ELMFAEIKTSLHDFGVDFDVYFHEDSLH--ESGAVERAVERLRASGHMFEA--------- 287 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 L R+T GDD DR ++KSDG Y A D+AY+ K ERGFD ++ ++GS Sbjct: 288 -------DGALWLRTTAFGDDKDRVVVKSDGQAAYIAGDIAYYLDKRERGFDRVVIMLGS 340 Query: 359 DHSGYVKRLEAVAAAVSEK-KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 DH GYV R+ AV AA ++ + +L+ +LV L +DG P++MSKRAG IT+ +V+ V Sbjct: 341 DHHGYVGRMMAVCAAFGDEPHVNLELLIGQLVNLVKDGEPVRMSKRAGTIITIDDLVEAV 400 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G D+ R+ + + + +D D + + + ENPVFYVQYA+AR ++ R A + + Sbjct: 401 GVDAARYALSRSSSDQQIDLDLDLLAKATNENPVFYVQYAHARTAAMARNAAEAGVRRE- 459 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 D F +++ E SE +L+ LA++PRV+ A +EP+++A Y D+A +H + Sbjct: 460 DGFDASLLDHE-----SEAKLLGLLADFPRVVAQAADLREPHRVARYAEDVAGAYHKWYD 514 Query: 538 HGRENPRLRFVQANNRKLTMM---RLQLVHAVASIINSGLNIIGVESPNEM 585 R R V + +LT RL L A ++ + L+++GV +P M Sbjct: 515 QKR-----RVVPWGDEELTDAHRTRLWLNDATRQVLANALDLLGVSAPERM 560 >gi|88607168|ref|YP_505281.1| arginyl-tRNA synthetase [Anaplasma phagocytophilum HZ] gi|109894971|sp|Q2GK20|SYR_ANAPZ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|88598231|gb|ABD43701.1| arginyl-tRNA synthetase [Anaplasma phagocytophilum HZ] Length = 580 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 231/583 (39%), Positives = 350/583 (60%), Gaps = 13/583 (2%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 +F F + ++ ++ + + + + RI++ P HG L TNAA+IL + +P+ Sbjct: 10 IFGFFRNAIEERIRAVWSGDNIPESLFKRIIVGPPAQPKHGDLYTNAALILGKFDKKNPM 69 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +A + + ++S+ + GFIN + S ++ +I G EYGR +G K Sbjct: 70 ELASTLCNAFENIEGIESINVVAPGFINFHCVNSVWHGVVRNINKLGREYGRTDLGHNKK 129 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VNIEFVSANPTGP+H+GH R AV GD L++L+ + GY+V +EYY+NDAG+Q+ TL SVF Sbjct: 130 VNIEFVSANPTGPLHIGHARGAVFGDVLSNLLKWVGYDVIKEYYVNDAGSQVKTLVSSVF 189 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 RY++AL + + G YPG YLK + ++L +KY S+LLN ++ I++ +++ +M+ Sbjct: 190 LRYKEAL-GEEITIGAGLYPGEYLKPIARDLVEKYGSDLLNASDKD--EIIRSFTLSSML 246 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 +I++DL L ++HD+F+SE D + I + + L +G +YEG+L PK + Sbjct: 247 NLIKEDLALLGVEHDVFVSESDLQNRNV--IEECVKYLRERGIIYEGVLEKPKREDELSE 304 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 R Q+LF+ST GDD DR L K DG+++YFA D+ Y K RGFD+MI +G DH G Sbjct: 305 WQPRVQMLFKSTEFGDDSDRALQKEDGTWSYFAGDIGYHFHKISRGFDSMIMTLGFDHKG 364 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 YV RL+A AA+S KA I++ L LV +G P+KMSKR G+F+T+R V+DEVG D Sbjct: 365 YVSRLKAAVAALSNGKASIDIKLYNLVNFLENGTPVKMSKRKGEFLTVRDVIDEVGRDVA 424 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 RFMML R+N +LDFDF K +E+SK++ +FY+QYA+AR RSI R+ + L Sbjct: 425 RFMMLTRRNDVVLDFDFAKAREESKDSQIFYIQYAHARIRSIVRRCPE--------LLAI 476 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 I EL L+ L+ +P VI+ + EP+ +AFYL ++A FH W G + Sbjct: 477 EKIDFSCVITEQELSLLRLLSRWPSVIKTSAENYEPHTIAFYLIEVAEAFHALWGCGNSD 536 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P +RF+ + T R+ + AV+ +I SGL+I + EM Sbjct: 537 PSMRFIVEGDLHTTSARIYIAIAVSHVIASGLDIFSITPSEEM 579 >gi|295394643|ref|ZP_06804862.1| arginine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030] gi|294972536|gb|EFG48392.1| arginine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030] Length = 546 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 196/581 (33%), Positives = 315/581 (54%), Gaps = 40/581 (6%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 + ++ + + ++ ++V+ERP++ HG +TN A+ ++ GL P +A Sbjct: 5 ELKLAIEQAISAYNETHGTNVEVPAKLVVERPKNRDHGDWATNVALQTAKKTGLQPRELA 64 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 + + ++ +AG GF+N+ L+ K+ + IV +G EYGR K + +N+ Sbjct: 65 TGLAQILSDVDGIEKAEVAGPGFLNITLAAGAAGKLAADIVSAGREYGRGESLKDSTINL 124 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+H+GH R A +GD + ++ +G VT EYYINDAG+Q++T A SV R Sbjct: 125 EFVSANPTGPLHIGHTRWAALGDAIGRVLKAAGATVTTEYYINDAGSQMDTFANSVLARM 184 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245 + D+PEG YPG Y+ + +EL ++ E + +E VKD + +A +K I Sbjct: 185 RGK------DVPEGGYPGQYIADIARELLSRH-PEWNDAKDEDIFEQVKDEAYKAQLKDI 237 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 D L++ + D + SE H D I + ++ L QG+V+E Sbjct: 238 SDTLESFGVHFDTWFSERTLH--DTGAIAEAVERLREQGHVFEN---------------- 279 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365 + R+T GDD DR L++SDG TYFAAD AY+ K +RGF+ IY++G+DH GYV Sbjct: 280 EGAIWLRTTDFGDDKDRVLVRSDGVPTYFAADAAYYLNKRDRGFEEKIYLLGADHHGYVG 339 Query: 366 RLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 RL+A+AA + + I +L+ +L+ + ++SKRAG+ I LR +V+ +GSD+VR+ Sbjct: 340 RLKALAATAGDDPNRNIEILIGQLISV----NGARLSKRAGNIIELRDLVEWLGSDAVRY 395 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 + L D +K S +NPV+YVQYA+AR +S+ R+A D Sbjct: 396 SLARTPADSPLALDPEVLKSASNDNPVYYVQYAHARAKSVERKATSAGVSTD-------S 448 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 + D +E L+ LA+YPRV+ + +EP+++A YL LA +FH + R P Sbjct: 449 FDPATLQDPTEAALLSALADYPRVVAQSAQLREPHRVARYLESLAGLFHKWYDACRVTP- 507 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL L A A+++++GL+++GV +P M Sbjct: 508 --LGDDPVEPVHSSRLMLDMATATVLSNGLDLMGVSAPERM 546 >gi|148270771|ref|YP_001245231.1| arginyl-tRNA synthetase [Thermotoga petrophila RKU-1] gi|166200584|sp|A5IN82|SYR_THEP1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|147736315|gb|ABQ47655.1| arginyl-tRNA synthetase [Thermotoga petrophila RKU-1] Length = 546 Score = 526 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 186/579 (32%), Positives = 293/579 (50%), Gaps = 34/579 (5%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + ++ + E+ K+ + IE P G LSTNAAM L++ L +P IA+ Sbjct: 2 LVNTIRQKVSEVISKVYDSE---IEFEIEIPPKKEFGDLSTNAAMKLAKTLKKNPREIAQ 58 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 IV + DP D + I G GFIN +LS LR ++ +++ EYGR G G K+ E Sbjct: 59 EIVKSLDEDPSFDRIEIMGPGFINFFLSNELLRGVVKTVLERKDEYGRENTGNGVKIQFE 118 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 + SANPTGP VGH R ++GD L+ + GY+VTRE YINDAG QI LA S++ RY Sbjct: 119 YGSANPTGPFTVGHGRQIIIGDVLSEVFKELGYDVTREMYINDAGKQIKLLAQSLWARYN 178 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 Q L + ++PEG Y G YL + ++L + + + E+ + K ++ ++ ++ Sbjct: 179 QLL-GVEKEIPEGGYRGEYLVDIARDLVSEIGDKYKDLWNEEVEELFKQTALNRILSSMK 237 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 D L+ + D++ SE + + +++ L + VYE Sbjct: 238 DTLEKIGSSFDVYFSEKSL--IEDGTVEEVLKLLKDRDVVYE----------------KD 279 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366 + + + D+ D+ L++SDG+YTYF D+AY KY+RGF + + GSDH G++ R Sbjct: 280 GAVWLKVSAFIDEEDKVLVRSDGTYTYFMTDIAYHYKKYKRGFRKVYDIWGSDHHGHIPR 339 Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 ++A A+ NV+L + V L RD ++MS RAG+F+TL ++DEVG D+VR+ Sbjct: 340 MKAAMKALDIPDDFFNVILHQFVTLKRDDEIVRMSTRAGEFVTLDELLDEVGRDAVRYFF 399 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 + + FD K +S +NPV+YVQYA+AR ++F A+ + Sbjct: 400 AMVDPNTHMVFDIDLAKAKSMDNPVYYVQYAHARIYNLFSNAEKKGVKFEEGK------H 453 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 E + E L+ +L + V++ P +L YL LA FH ++ Sbjct: 454 LELLGNEEERVLMRNLGMFNTVLKEVAQMFAPNRLTNYLQSLAESFHAFYTKH------V 507 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V N +L+ RL L A ++ GL +IGV +P M Sbjct: 508 IVDPENPELSNARLNLALATGIVLRKGLKLIGVSAPERM 546 >gi|289432951|ref|YP_003462824.1| arginyl-tRNA synthetase [Dehalococcoides sp. GT] gi|288946671|gb|ADC74368.1| arginyl-tRNA synthetase [Dehalococcoides sp. GT] Length = 556 Score = 526 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 197/589 (33%), Positives = 317/589 (53%), Gaps = 37/589 (6%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILD---RIVIERPRDCAHGHLSTNAAMILSRPL 57 M + + L + K + E +I I IE P+ +G +T+ + L++ Sbjct: 1 MNSILAIKNIIIESLSQAMEKARQEGQIPALSVDISIEHPQKTNYGDYATSLPLRLAKAT 60 Query: 58 GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117 G P+ +A+++ + I+ + V +A GFIN S +L ++ +I+ YG + Sbjct: 61 GKRPMELAQILASYIETGSGISKVSVAPPGFINFTFSKEWLCSLVKTILTEAGSYGNINM 120 Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 G G++V IEFVSANPTGP+H+GH R AV+G TL++++ +GY V E+YINDAG+QI+ Sbjct: 121 GGGSRVQIEFVSANPTGPIHIGHGRGAVLGSTLSNILKAAGYYVEEEFYINDAGSQIDAF 180 Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237 ++F RYQQAL D+ +P+ Y G Y+ + E+ KY + L P + + + Sbjct: 181 KRTLFARYQQAL-GKDAAVPQDGYHGQYMVDLAAEMVTKYGDKYLQMPADIAQNDLGEIG 239 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 + M+ +I DDLKAL + DI+ SE + G + +D L+ Y+ E Sbjct: 240 MTRMLCLISDDLKALKVDFDIWFSERSLYSG--GQYKTAMDILSGNNYIAE--------- 288 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVM 356 F ST++GD D +++SDG+ TYFA+D+AY K+ ER FD +I + Sbjct: 289 -------RDNATWFSSTLLGDSKDNVIVRSDGTPTYFASDIAYHYNKFIERKFDRVINIW 341 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G+DH G+V R++A+ +A+ ++ LL +++ L R G +++SKR G+ I+LR V++E Sbjct: 342 GADHQGHVSRMKAMVSALGINPERLTTLLFQMITLKRGGELVRLSKRTGEIISLREVIEE 401 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG+D+ RF L R +DFD K++S ENPV+YVQYA+AR SI A++ D Sbjct: 402 VGADACRFFFLARSTESQMDFDLELAKKESAENPVYYVQYAHARICSILHLAEENQLDYS 461 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 E E I +AE P ++E + EP+ L +Y +LA+ FH + Sbjct: 462 TGDTDLLGEEAELEL-------IRKMAELPEIVETVSRTLEPHHLTYYAQELANAFHQFY 514 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R V ++N +LT RL+LV A ++ L+++G+ SP M Sbjct: 515 KDCR-------VISDNAELTCARLKLVDASRIVLARTLHLMGMTSPESM 556 >gi|184200608|ref|YP_001854815.1| arginyl-tRNA synthetase [Kocuria rhizophila DC2201] gi|238689220|sp|B2GLW8|SYR_KOCRD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|183580838|dbj|BAG29309.1| arginyl-tRNA synthetase [Kocuria rhizophila DC2201] Length = 556 Score = 526 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 185/583 (31%), Positives = 292/583 (50%), Gaps = 34/583 (5%) Query: 6 DFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + SS + L++ ++ + L +ERP++ HG +T AM +++ +G P Sbjct: 5 ELSSAVSACLQDAVAAGELTVVDGVDLPEAKVERPKNRDHGDWATTVAMQVAKKVGRSPR 64 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +A+++ R+ P V +V IAG GF+N+ L + + S+V G +G GT Sbjct: 65 DVAQILSERLARVPGVKTVDIAGPGFLNITLDAAAAGGLAQSVVEQGSAFGTGDALAGTT 124 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 +N+EFVSANPTGP+H+G R A VGD+LA ++ G EV REYY ND G QI+ A S+ Sbjct: 125 INLEFVSANPTGPIHLGGTRWAAVGDSLARVLQAQGAEVVREYYFNDHGNQIDRFARSLL 184 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 R + PE Y G Y+ V +E+ + L + ++ + + V+ M Sbjct: 185 ARAR------GEAAPEDGYGGQYISDVAQEVLALHPDALESEDPQE---VFRAAGVELMF 235 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 I+ L + D+F E+ + + +++ L +Y Sbjct: 236 AQIKSSLHEFGVDFDVFFHENSLF--EDGQVEKLLEQLRSSDSLYFA------------- 280 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 RST GDD DR ++KSDG+ Y A D+AYFK K +RG D IY++G+DH G Sbjct: 281 ---DGAWWLRSTEHGDDKDRVVIKSDGNAAYIAGDIAYFKNKRDRGADLCIYMLGADHHG 337 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 YV RL+A AAA+ + + VL+ ++V L RDG ++MSKRAG +T+ +V+ VG D+ Sbjct: 338 YVARLKAAAAALGDSPDAVEVLIGQMVNLVRDGEAVRMSKRAGTVVTMEDLVEVVGVDAA 397 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 R+ + +D D + +S ENPVFYVQYA+AR ++ R A+ D Sbjct: 398 RYSLTRYSVDSNIDIDLDVLTRRSNENPVFYVQYAHARTCAVARNAEAAGVRRT-DDAGA 456 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 E L+ L +YP V+ A +EP+++A +L LA +H + R Sbjct: 457 PQFDAALLSHPREADLLAALGQYPSVVAQAADFREPHRVARHLEALAGAYHRWYDACRVT 516 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P+ + RL L AV ++ +GL+++GV +P M Sbjct: 517 PQG---DGEVELVHHTRLWLNDAVRQVLANGLDLLGVSAPERM 556 >gi|258543874|ref|ZP_05704108.1| arginine--tRNA ligase [Cardiobacterium hominis ATCC 15826] gi|258520880|gb|EEV89739.1| arginine--tRNA ligase [Cardiobacterium hominis ATCC 15826] Length = 592 Score = 526 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 203/620 (32%), Positives = 311/620 (50%), Gaps = 65/620 (10%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILD-RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 + + S L L + K+E+ L + + R ++ AHG S+N AM ++ ++P Sbjct: 1 MKTEILSGLTTALHAVARAQKIEEGQLTLPLELGRCKNPAHGDYSSNVAMQYAKTFQMNP 60 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 AE ++A + P + +V IAG GFIN+ L+ +L +IV G YGR+ Sbjct: 61 RQFAEALIAALPAHPGIAAVEIAGPGFINIRLASGSDSAVLETIVREGAAYGRHQAEHPQ 120 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 K+ +EFVSANPTGP+HVGH R A G TLA+++ +G+ V EYY+NDAG Q++ LALSV Sbjct: 121 KILLEFVSANPTGPLHVGHGRGAAYGATLANILRANGHHVDNEYYVNDAGRQMDILALSV 180 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE--------------- 226 +WRY Q + +D LP+G Y G Y+ + +E +Y + PE Sbjct: 181 YWRYMQ-ICGSDRTLPQGIYQGDYVVDIAREHYARYGDKHYRAPETWVPAHPAEWSEAAI 239 Query: 227 ---------------------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 E V D + A + IRDDL+ + D + SE Sbjct: 240 DNGERDAWIDAAIAALKNTLGEADYRAVFDAGLDAEVADIRDDLQEFGVTFDRWYSERAL 299 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 I +++ L +GY+YE FR++ GD+ DR + Sbjct: 300 FT--DGRIAEMLGVLRARGYLYE----------------KDGAQWFRASDFGDEKDRVVT 341 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLL 385 + +G TYFA+D+AY KY+RG+D MI + G+DH GY+ R+ A AA+ ++++ L Sbjct: 342 RENGITTYFASDIAYHYDKYQRGYDRMIDIFGADHHGYMARVRASLAALGLAPEKLDITL 401 Query: 386 CELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 + LY+DG ++MS R+G F+TLR + +VGSD+ RF + RK + LDFD Sbjct: 402 VQFAVLYKDGAKMQMSTRSGQFVTLRDLRAQVGSDAARFFYVMRKPEQHLDFDLDLATSH 461 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEY 505 SK+NP +YVQYA+AR + +A++ D + +E + E L+ LA Y Sbjct: 462 SKDNPYYYVQYAHARTSRVLERAQEEGVPFD---TQTALAQREHLTEPEEKTLLRELARY 518 Query: 506 PRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHA 565 P I A + + YL DLA +H ++ G + V ++ L RL L HA Sbjct: 519 PDTIAAAGAQMAGHLIVNYLKDLAGAWHQYYDAGHK------VLHDDAALRDARLLLTHA 572 Query: 566 VASIINSGLNIIGVESPNEM 585 V ++ +GL+IIGV + M Sbjct: 573 VRQVLRNGLDIIGVAARERM 592 >gi|167039271|ref|YP_001662256.1| arginyl-tRNA synthetase [Thermoanaerobacter sp. X514] gi|300913911|ref|ZP_07131228.1| arginyl-tRNA synthetase [Thermoanaerobacter sp. X561] gi|307725404|ref|YP_003905155.1| arginyl-tRNA synthetase [Thermoanaerobacter sp. X513] gi|166853511|gb|ABY91920.1| arginyl-tRNA synthetase [Thermoanaerobacter sp. X514] gi|300890596|gb|EFK85741.1| arginyl-tRNA synthetase [Thermoanaerobacter sp. X561] gi|307582465|gb|ADN55864.1| arginyl-tRNA synthetase [Thermoanaerobacter sp. X513] Length = 562 Score = 526 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 198/591 (33%), Positives = 323/591 (54%), Gaps = 38/591 (6%) Query: 2 YLFADFSSRLKN----YLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL 57 + +K+ ++ + + +++ I IE P++ HG L+ N AM++++ Sbjct: 3 NIIQKVKDEIKDMVTTAIENSVKEGLMNIEVIPEIEIEEPKEKQHGDLAINTAMVIAKQA 62 Query: 58 GLDPLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116 + P IAE+IV+++ + ++ + IAG GFIN +L +L + L + G +YGR Sbjct: 63 KMPPKKIAEIIVSKVDPSNTFIEKIEIAGPGFINFFLKDKFLEETLKLVYERGKDYGRVN 122 Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176 IG G KV +EFVSANPTGPMH+G+ R +GD LA+++ ++GY+VTRE+YINDAG QI Sbjct: 123 IGNGKKVQVEFVSANPTGPMHMGNARGGALGDALAAVLDYAGYDVTREFYINDAGNQIEK 182 Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236 S+ RY Q L +++PEG Y G + +E + Y + + P E + DY Sbjct: 183 FGYSLEARYLQLL-GIPAEVPEGGYQGEDIIDRAREFLEIYGDKYKDVPSEVRRKALIDY 241 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 ++ ++ I++DL I++D++ SE + D + +I+ L ++GY YE Sbjct: 242 GLKKNLEKIKEDLALYGIEYDVWFSEQSLY--DSGEVYKVIEELKQKGYTYE-------- 291 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355 L F+ T+ G + D L++++G TY A+D+AY K K+ RGFD +I V Sbjct: 292 --------KDGALWFKMTLFGAEKDDVLVRTNGFPTYLASDIAYHKNKFITRGFDWVINV 343 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 G+DH G+V ++ A+ +++V+L +LV+L G +KMSKR G +TLR ++D Sbjct: 344 WGADHHGHVAPMKGAMQALGIDPDRLDVVLMQLVKLIEGGQVVKMSKRTGRMVTLRDLID 403 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 EVG D+ RF R +DFD KEQS ENPVFYVQYA+AR SI RQ ++ + Sbjct: 404 EVGKDAARFFFNMRSADSSIDFDLDLAKEQSNENPVFYVQYAHARICSIIRQLEEEGVKI 463 Query: 476 D-FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 D D +++ +E E + + A +P I A P+++ Y+ D+AS+FH Sbjct: 464 DNIDEVDLSLLKEEEEKELIKKL-----AYFPEEITIAAKTLAPHRITRYVLDVASLFHS 518 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ R V+ L R L+ AV ++I + L+I+ + +P +M Sbjct: 519 FYNSHR-------VKGVEEDLMKARYVLILAVKTVIKNVLDILKITAPEKM 562 >gi|332977286|gb|EGK14077.1| arginine--tRNA ligase [Psychrobacter sp. 1501(2011)] Length = 609 Score = 526 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 186/627 (29%), Positives = 303/627 (48%), Gaps = 70/627 (11%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 + + L + K + + + + I R + HG ++N A+ ++ +P + Sbjct: 7 DEIFALLDSAAKVLIDQDILPNGWQNNSQITRSKSPEHGDYASNIALTAAKAAKSNPRAL 66 Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 AE ++A + + + + +AG GFIN++L+ +L +I + YG K+ Sbjct: 67 AEQLIAALPDNDSIAKLEVAGPGFINIFLNTGAKFAVLDAIFDNNERYGLTDEFSDKKIQ 126 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPT +HVGH R A G ++A+L+ GY+VTREYY+NDAG Q++ LA S + R Sbjct: 127 VEFVSANPTSSLHVGHGRGAAFGMSVANLLEAVGYKVTREYYVNDAGRQMDILAASTYLR 186 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADK--------YSSELLNFPEEKWLPIVKD- 235 Y + L P G Y G Y+ + + + + Y+ N PE+ D Sbjct: 187 YLE-LNGEQVHFPVGGYQGDYVTDIAQTIKTQQADAYVHPYAEISANVPEDAVFETNADG 245 Query: 236 ---------------------------------YSVQAMMKIIRDDLKALNIQHDIFISE 262 ++ +++ I+DDL ++ + + SE Sbjct: 246 EQELVSGDKNAHVDGIIANSKQALGDNYEIFLNAALSEILEDIKDDLNDFGVRFERWFSE 305 Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322 I ++ L +GY+YE FRST GD+ DR Sbjct: 306 KSI----ADEIEPVLAELESKGYLYE----------------KDGNTWFRSTDFGDEKDR 345 Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQIN 382 + +++G TYFA+D+AY K K+ERGFD +I V G+DH GY+ R+ A A+ + ++ Sbjct: 346 VVRRANGLTTYFASDIAYHKNKFERGFDTVINVWGADHHGYIARVRAALTALGIDEKRLE 405 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 V+L + V L+R I+MS R+G F+TLR + +EVG+D+ RF + RK +DFD Sbjct: 406 VILVQFVALWRGEEKIQMSSRSGKFVTLRELREEVGNDAARFYYVARKPEVHIDFDLELA 465 Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 K QSK+N V+Y+QYA+AR S+ + ++D + Q +E +LI L Sbjct: 466 KSQSKDNAVYYIQYAHARVCSVLEKLNAKGFNVD---DAQGKAMQNLLQAEAESELIKLL 522 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA----NNRKLTMM 558 A YP ++ A +P+ L YL DLAS+FH ++ R P L Sbjct: 523 AAYPATLKRAATGYDPHVLTNYLKDLASLFHAWYNDNRILPVSIIADEKPTQEELDLMQA 582 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 RL+L AV ++ +GL+++G+ +P M Sbjct: 583 RLRLSKAVRQVLANGLSLLGLSAPTNM 609 >gi|50083449|ref|YP_044959.1| arginyl-tRNA synthetase [Acinetobacter sp. ADP1] gi|81393974|sp|Q6FFM0|SYR_ACIAD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|49529425|emb|CAG67137.1| arginyl-tRNA synthetase [Acinetobacter sp. ADP1] Length = 596 Score = 525 bits (1353), Expect = e-147, Method: Composition-based stats. Identities = 186/629 (29%), Positives = 313/629 (49%), Gaps = 77/629 (12%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L + ++ + + + + + R +D +HG ++N AM+ S+ G+ Sbjct: 1 MN--TAIQAALDHVVQSLQQEGILPSDWNNNSTLTRTKDRSHGDFASNIAMVGSKAAGMK 58 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE I+A + D+ IAG GFIN +L+ +L I G YG+ + Sbjct: 59 PRDLAEKILASLPEVADITKAEIAGPGFINFFLNADQRFAVLDQIQAQGQYYGQTQVNAE 118 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 K+ +EFVSANPT +HVGH R A G T+A+L+ +G +V REYY+NDAG Q++ LA S Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVANLLEATGAQVDREYYVNDAGRQMDILATS 178 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL--------NFPEE----- 227 + RY + L P+ Y G Y+K + + + DK + N PE+ Sbjct: 179 TYLRYLELL-GQPLVFPKNAYQGDYVKEIAQSIIDKDGDAYVRSVADVYRNVPEDVQYAE 237 Query: 228 -------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 + + +++A++ I+DDL + Sbjct: 238 ELDSEGNKVVLSGDKEKHIDGLIANSQQLIGQGYRVFHQAALKAILDDIKDDLADFGVTF 297 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D + SE I + + L ++GY+YE + F+ST Sbjct: 298 DQWFSEASL----TQKIDEALQTLDQRGYLYE----------------KEGNIWFKSTKF 337 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GD+ DR + + +G TYFA+D+AY K +RG+ +++ + GSDH GY+ R++A A+ Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLDKLQRGYTHIVDIWGSDHHGYIARVKAAIDAMGY 397 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 +++ VLL + V L+R G ++MS R+G F+TLR + EVG+D+ RF + RK+ + +D Sbjct: 398 DSSKLTVLLVQFVSLWRGGEMVQMSSRSGQFVTLRELRQEVGNDAARFYYVMRKSEQHID 457 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD QSK+N V+Y+QYA+AR + +A + F+ + D +E Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARICRMLEKA--NSTQMRFNQTQARQFANRLDLD-AET 514 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +++ LA YP ++ A A EP+++ YL +LA++FHG ++ + V + +LT Sbjct: 515 EILAKLAAYPDILVRAANAYEPHQIGNYLKELAALFHGWYNEHK-------VLTEDVELT 567 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L V ++ +GL+++GV +P M Sbjct: 568 QARLLLSVNVQQVLRNGLDLLGVSAPEAM 596 >gi|291541511|emb|CBL14621.1| arginyl-tRNA synthetase [Ruminococcus bromii L2-63] Length = 578 Score = 525 bits (1353), Expect = e-147, Method: Composition-based stats. Identities = 186/585 (31%), Positives = 306/585 (52%), Gaps = 21/585 (3%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 ++N +++ ++ + +IE P D +HG +TNAAM ++ + P IA Sbjct: 10 QLKKAIENAIEKAISNGELPQAETAPFIIETPADRSHGDFATNAAMAGAKAFRMPPFKIA 69 Query: 66 ELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 + I + + ++ + D AG GFIN +L + ++ I+ + YGR+ G+ KV Sbjct: 70 QAITSNLDLEGTMFDRFETAGPGFINFFLGTEFYSAVIREILANPEAYGRSEYGRDEKVM 129 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGPMH+G+ R +GD LA+++ +GY RE+Y+NDAG QI S+ R Sbjct: 130 VEFVSANPTGPMHMGNARGGALGDCLAAVLDKAGYNAWREFYVNDAGNQIEKFGCSLEAR 189 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 Y Q ++ + PE Y G +K + KE AD L+N E+ + DY++ +K Sbjct: 190 YLQIFKGDEIEFPEDGYQGEDIKDLAKEYADLNGDSLVNVSAEERKKALVDYALPKNIKK 249 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE---GILPPPKSKTTQK 301 ++ D++ I +D + E + H+ ++ ++D L +G YE + K TQK Sbjct: 250 MQADMEKYKIFYDKWFFESELHK--SGAVKAVVDLLTEKGLTYEKEGAVWYKNKEVLTQK 307 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 + K + + + D L++ +G+ TYF AD+AY K K++RGF +I V G+DH Sbjct: 308 LLKEGKSQKYIDNL--ELKDDVLIRQNGNPTYFTADIAYHKNKFDRGFTTLIDVWGADHH 365 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 G+V R++ A+ ++NV+L +LV+L +DG ++MSKR G I L ++DEV DS Sbjct: 366 GHVMRMKGAMDAIGYDGDKLNVVLMQLVKLVKDGELVRMSKRTGKAIQLGDLLDEVPVDS 425 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ-AKDIFPDLDFDLF 480 RF+ ++ + +DFD Q +NPV+YVQYA+AR SIF+ AK+ + Sbjct: 426 ARFLFNTKEANTQMDFDLDLAVSQDNQNPVYYVQYAHARICSIFKSLAKEGISPRECTDA 485 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 ++ E +LI HLA Y I +A +P K+ Y+ LA++FH ++ R Sbjct: 486 ELALLTA-----PEEKELINHLASYTNEIISAAKDYDPTKVTRYVTQLATLFHKFYNACR 540 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V+ L RL L + V ++I + L + + P M Sbjct: 541 -------VKGEEEGLMQARLALCNCVRAVIKNVLTMFNISCPESM 578 >gi|114331591|ref|YP_747813.1| arginyl-tRNA synthetase [Nitrosomonas eutropha C91] gi|122313625|sp|Q0AFN4|SYR_NITEC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|114308605|gb|ABI59848.1| arginyl-tRNA synthetase [Nitrosomonas eutropha C91] Length = 586 Score = 525 bits (1353), Expect = e-147, Method: Composition-based stats. Identities = 195/613 (31%), Positives = 312/613 (50%), Gaps = 67/613 (10%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 DF S L + K + ++ I ++RP+ HG STN AM L++ L +PL +A Sbjct: 8 DFRSHCVQLLAQAV-KQVLPEETEIHIELQRPKQMDHGDYSTNLAMKLAKRLRRNPLELA 66 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 ++++ + P V +AG GF+N +L + ++ L +++ + +G + +G G + I Sbjct: 67 KVLIGALPDSPYVGKTVVAGGGFVNFFLKKTAKQQFLLTVLQAADSFGHSKLGAGKTIQI 126 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+HVGH R A G +LA++MA +GY VTRE+Y+NDAG Q++ LALS + RY Sbjct: 127 EFVSANPTGPLHVGHGRGAAFGASLANIMAAAGYAVTREFYVNDAGRQMDILALSTWLRY 186 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE------------------ 227 L P Y G Y+ + E+ + ++ + Sbjct: 187 LD-LCGIALPFPSNAYQGRYVVDMALEIHRIHGDRYAHYSDSPTQQLAEINAKAAADGED 245 Query: 228 ---------------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272 + + ++ + + R+DL ++ + + SE D Sbjct: 246 EYLDNLITAAKSILGEDYAYLHNFVLTEQLNDCRNDLMEFGVEFENWFSEQSLF--DSGM 303 Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332 + + L + +Y L F+ST GD+ DR + + +G YT Sbjct: 304 VARAVQLLDDKKLLYR----------------QDGALWFQSTGFGDEKDRVVQRENGQYT 347 Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392 YFA+D+AY KYERGFD M+ + G+DH GY+ R++ A+S ++ + L + LY Sbjct: 348 YFASDIAYHLSKYERGFDYMLNIWGADHHGYISRVKGAIEALSLDSDKLEIALVQFAVLY 407 Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 RDG I MS R+G+F+TLR + EVG+D+ RF + RK+ + LDFD K QS +NPV+ Sbjct: 408 RDGNKISMSTRSGEFVTLRQLRQEVGNDAARFFYVLRKSDQHLDFDLDLAKSQSNDNPVY 467 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 YVQYA+AR S+ Q D+F R E + +EL L+ + ++P IE A Sbjct: 468 YVQYAHARICSVLEQWGGA-----VDIFGRA--ETELLTNPAELVLLQKIIDFPDTIEAA 520 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572 P+ +AF+L +LAS FH +++ R + L + RL L+ AV +++ Sbjct: 521 AKEHAPHLIAFFLRELASEFHSYYNSTRF-------LIPDEALKIARLALISAVCQVLSK 573 Query: 573 GLNIIGVESPNEM 585 GL+++GV SP +M Sbjct: 574 GLSLLGVTSPRKM 586 >gi|313892155|ref|ZP_07825748.1| arginine--tRNA ligase [Dialister microaerophilus UPII 345-E] gi|313119293|gb|EFR42492.1| arginine--tRNA ligase [Dialister microaerophilus UPII 345-E] Length = 554 Score = 525 bits (1352), Expect = e-147, Method: Composition-based stats. Identities = 193/586 (32%), Positives = 303/586 (51%), Gaps = 33/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIV-IERPRDCAHGHLSTNAAMILSRPLGL 59 M + + ++ ++ K + +E G S+NAAM +R + Sbjct: 1 MEVRDELKELIEKAKLAAVESGELPKGDYPPVQRLELSPKKEFGDYSSNAAMQWARVAHM 60 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE++V I V IAG GFIN +L+ + + L I+ G YG Sbjct: 61 APRKIAEILVEHID-SSLVSKTDIAGAGFINFFLAKNTVYAELKKILAKGENYGDLPRND 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 V +E+VSANPTGP+H+GH R A G + +L+ +GY+V EYYINDAG QI+ LAL Sbjct: 120 EEAVLVEYVSANPTGPLHIGHARGAAYGSAMVNLLRSAGYKVLAEYYINDAGNQIDNLAL 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV RY Q L D+ LPE Y G + + + D+ ++ L EEK + + K+ +++ Sbjct: 180 SVNARYLQLL-GKDAQLPENGYHGHDIIETAQSILDRDGTKYLEMDEEKRIEVFKEVALK 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 + ++ DL N++ D+++SE F+ P + +++D L + G +YE Sbjct: 239 EKLAALKKDLSDFNVEFDVWMSERSFY---PDQVNEVLDILKKNGTLYE----------- 284 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 +T GDD DR +++S+G TYF +D+AY K K ERG+ +I + G+D Sbjct: 285 -----KEDAWWLNTTKDGDDKDRVVIRSNGEPTYFCSDIAYVKNKIERGYHKLIDIWGAD 339 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ R+++ ++ +++L ++V L RDG P+KMSKR G +TLR ++DEVG Sbjct: 340 HHGYIARVKSAMTSLGYNADDFDIMLLQMVTLLRDGKPVKMSKRTGQSVTLRELMDEVGV 399 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D R+ R +DFD K++S ENPV+Y+QYA AR S+F+QA++ + Sbjct: 400 DVARYFFCSRTLDSQMDFDIDLAKKRSSENPVYYIQYANARVHSLFKQAEENGVKIP--- 456 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + D SEL LI + Y ++ A + P ++A Y Y+LA++FH + Sbjct: 457 -SWEDVDFTVLVDESELDLIKKMEVYHGFLKGAAAERAPQRIATYAYELAALFHHFYRKC 515 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R + KL RL L+ AV ++ L I+GV +P EM Sbjct: 516 R-------ILGEEEKLMQARLGLIRAVGYVLVHALGILGVSAPEEM 554 >gi|300789616|ref|YP_003769907.1| arginyl-tRNA synthetase [Amycolatopsis mediterranei U32] gi|299799130|gb|ADJ49505.1| arginyl-tRNA synthetase [Amycolatopsis mediterranei U32] Length = 553 Score = 525 bits (1352), Expect = e-147, Method: Composition-based stats. Identities = 189/582 (32%), Positives = 290/582 (49%), Gaps = 33/582 (5%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 A + +++ ++ ++ +L +++ IERPR+ HG +TN A+ +++ GL P Sbjct: 4 AALADLVRSSAVQVLAARGIDDAVLPEQVTIERPRNPDHGDYATNLALQVAKKAGLKPRD 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 AE + A + D V S +AG GF+N L+ + I+ ++ +G YGR GT++ Sbjct: 64 FAEALAAAVSADDGVASAEVAGPGFLNFRLAAAAQGDIVRQVLDAGAAYGRGDALAGTRI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD L ++A G +VTREYY NDAGAQI+ S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDALGRVLAAQGADVTREYYFNDAGAQIDRFVRSLIA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+ + E+ S L+ PE + + + M Sbjct: 184 AAK------GEPAPEDGYAGGYINDIAAEVIKAEPSA-LSLPEAERHETFRRIGINLMFS 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L D++ E+ H + + + L G +Y Sbjct: 237 EIKQSLHDFGTDFDVYFHENSLH--ESGAVDAAVQQLKDSGNLY---------------- 278 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 D +S+ GDD DR ++K DG+ Y A DLAYFK K RGFD IY++G+DH GY Sbjct: 279 FDEGAWWLKSSEYGDDKDRVVIKQDGNPAYIAGDLAYFKDKRNRGFDLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 RL+A AAA + A + VL+ ++V L DG P++MSKRAG IT+ +V+ VG D R Sbjct: 339 TARLKAAAAAFGDDPATVEVLIGQMVNLVSDGKPVRMSKRAGTVITMEDLVEAVGVDPAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ LD D +++ S +NPV+YVQYA+AR ++ R A D L Sbjct: 399 YELIRYSVDSTLDVDLDLLRKHSNDNPVYYVQYAHARLCTMLRGA------ADLGLKSTE 452 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 + E LI + E+P + A +EP+++A YL +LA H + RE Sbjct: 453 DVDLGQLTLPVEGDLIRTIGEFPETVRRAAEMREPHRIARYLEELAGALHKFY-AVREAR 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L R+ L A ++ +GL ++GV +P M Sbjct: 512 VLPKGDEAATPANHARVALCEAARVVLANGLALVGVSAPERM 553 >gi|222530004|ref|YP_002573886.1| arginyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725] gi|222456851|gb|ACM61113.1| arginyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725] Length = 561 Score = 525 bits (1352), Expect = e-147, Method: Composition-based stats. Identities = 200/592 (33%), Positives = 322/592 (54%), Gaps = 38/592 (6%) Query: 1 MYLFA----DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRP 56 M L ++N +K K E + I+IE+P++ +HG +TN AM L+R Sbjct: 1 MNLVKLAKQQIQDVVQNAIKNCIDKGIFELDSIPDIMIEKPKEKSHGDFATNIAMELTRK 60 Query: 57 LGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115 L +P IA IV I + + ++ V +AG GFIN + +L K++ I+ G +YG+ Sbjct: 61 LKKNPREIANGIVNAIDLSNTFIEKVEVAGPGFINFFFKKDWLYKVVDVILSEGDDYGKV 120 Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175 IG G KV +EFVSANPTGPMH+G+ R +GD LA+L+ ++GY VT+E+Y+NDAG QI Sbjct: 121 NIGNGKKVMVEFVSANPTGPMHMGNARGGALGDCLANLLKWAGYNVTKEFYVNDAGNQIE 180 Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235 S+ RY+Q L + DLPE Y G + KE D++ +L N ++ + D Sbjct: 181 KFGQSLEIRYRQ-LKGENVDLPEDCYHGEDIIERVKEYLDEHGDDLENLSSDERRKKLVD 239 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 ++++ + ++++ L+ I++D++ E + + + + I++L +GY YE Sbjct: 240 FALKRNILLMKEHLRKYGIEYDVWFHESSLY--ESGEVFETIEDLKSRGYTYE------- 290 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDD-VDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMI 353 L F ++ + + D L++++G TYFAAD+AY + K+E RGFD +I Sbjct: 291 ---------KDGALWFAASKIDESLKDEVLIRANGIPTYFAADIAYHRNKFEKRGFDIVI 341 Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 + G+DH G+V R++A A+ ++ V+L +LVRL R ++MSKR G ITL + Sbjct: 342 DIWGADHHGHVARMKAAMKALGIDPEKLIVILMQLVRLVRGKEVVRMSKRTGKAITLIDL 401 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 +DE+G D+ RFM + ++ D V +Q+ +NPVFYVQYA+AR I R + Sbjct: 402 IDEIGKDAARFMFNTKSADTHIEIDLDLVTQQTLDNPVFYVQYAHARTCGIIRALSEEGI 461 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 LD ++ QE E + + L + IE A + ++ YL DLAS+FH Sbjct: 462 VLDKSRIKVELLQQEEELELLKKLLELP-----EEIEMAAKNLDVSRVTKYLLDLASMFH 516 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ R V+ N +L RL LV V +IN+ L ++GV++P +M Sbjct: 517 AFYNACR-------VKNENEELMFTRLSLVECVRIVINNMLRLLGVDAPEKM 561 >gi|187922480|ref|YP_001894122.1| arginyl-tRNA synthetase [Burkholderia phytofirmans PsJN] gi|238689569|sp|B2SWV4|SYR_BURPP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|187713674|gb|ACD14898.1| arginyl-tRNA synthetase [Burkholderia phytofirmans PsJN] Length = 596 Score = 525 bits (1352), Expect = e-146, Method: Composition-based stats. Identities = 190/615 (30%), Positives = 308/615 (50%), Gaps = 63/615 (10%) Query: 7 FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 + L +K++ + + + I +ERP+ AHG ++ N AM L++PL +P Sbjct: 9 LETLLAETVKQVATASQGASEAAFVSPAITLERPKVAAHGDVACNVAMQLAKPLRANPRQ 68 Query: 64 IAELIVARI----KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +A+ IV + + V++ +AG GFINL L+ + + +++++ +GR+ Sbjct: 69 LAQQIVDALLAQPQAKGLVEAAEVAGPGFINLRLAAAAKQAVIAAVFAEKEAFGRSQRDA 128 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G V IEFVSANPTGP+HVGH R A +GD L++++A GY+V RE+Y NDAG QI TLAL Sbjct: 129 GKHVLIEFVSANPTGPLHVGHGRQAALGDALSNVLASQGYDVHREFYYNDAGVQIQTLAL 188 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233 S R + L D+ P Y G Y+ + ++ A + + + L + Sbjct: 189 STQARAR-GLAPGDAGWPASAYNGEYIAEIARDYLNGVTVAASDGEPVTGARDVEDLEAI 247 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 + ++V + + DL+A ++ D + E ++ + ++ L G YE Sbjct: 248 RRFAVAYLRREQDMDLQAFGVKFDQYYLESSLYK--EGRVEKTVEALIAAGKTYE----- 300 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353 L R+T GDD DR + K+DG+YTYF D+AY K+ERGF +I Sbjct: 301 -----------QEGALWLRTTDDGDDKDRVMRKTDGTYTYFVPDVAYHVAKWERGFTKVI 349 Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 V GSDH G + R+ A + K + +L ++V + R+G +K+SKRAG ++T+R Sbjct: 350 NVQGSDHHGTIARVRAGLQGLGVGIPKGYPDYILHKMVTVMRNGEEVKISKRAGSYVTVR 409 Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 +++ G D+VRF ++ RK FD +Q+ ENP Sbjct: 410 DLIEWSGGATPGSEAAVDLIDEETIRRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V YVQYA+AR S+ + K + + L +V P SE + L+ LAE+P +++ Sbjct: 470 VHYVQYAHARICSVIAECKARYSTDESTLADVDVSPLTSE---RAMALLNKLAEFPDMLQ 526 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A P+ +AFYL DLA FH ++ R V ++ R+ L+ A ++ Sbjct: 527 HAADELAPHAVAFYLRDLAGEFHSFYND-----RTERVLVDDAAERNARVALLAATRQVL 581 Query: 571 NSGLNIIGVESPNEM 585 +GL IGV +P +M Sbjct: 582 ANGLATIGVSAPVKM 596 >gi|258646587|ref|ZP_05734056.1| arginine--tRNA ligase [Dialister invisus DSM 15470] gi|260404001|gb|EEW97548.1| arginine--tRNA ligase [Dialister invisus DSM 15470] Length = 554 Score = 525 bits (1352), Expect = e-146, Method: Composition-based stats. Identities = 192/552 (34%), Positives = 287/552 (51%), Gaps = 32/552 (5%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +E P+ G STNAAM +R +P IAE IV I P V + IAG GFIN +L Sbjct: 35 LEIPKAKEFGDYSTNAAMQWARTAHKEPRAIAESIVKYIDA-PLVSKMEIAGAGFINFFL 93 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + + L +I+ +G YG K K+ +E+VSANPTGP+H+GH R A G L +L Sbjct: 94 AADTVYAELRNILSAGASYGDLPKDKKDKILVEYVSANPTGPLHIGHARGAAYGSALVNL 153 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + +GY+V EYY+NDAG+QI LA SV RY Q L D+D+PE Y G + K L Sbjct: 154 LRAAGYDVYAEYYVNDAGSQIAHLAESVNARYLQLL-GKDADVPEDGYHGYDIVETAKSL 212 Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273 D+ L+ EE L + K ++ + I++ DL ++ D + SE + P + Sbjct: 213 IDREGDAYLSMDEEARLKVFKTVALNEKLSILKKDLADFHVTFDNWFSEKSLY---PKQV 269 Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333 D + L + GY+YE +T GDD DR +++++G TY Sbjct: 270 DDALAALKKDGYLYE----------------KDGAWWLATTKNGDDKDRVVIRANGEPTY 313 Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393 F +D+AY K +RG++ +I + G+DH GY+ R+ + + ++L ++V L R Sbjct: 314 FCSDIAYVPNKEKRGYNKLIDIWGADHHGYIIRIHSAMKFLGYDPEDFEIMLLQMVTLLR 373 Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453 DG P+KMSKR G +TLR ++DEVGSD+ R+ R +DFD K+QS +NPV+Y Sbjct: 374 DGQPVKMSKRTGQAVTLRELMDEVGSDAARYFFCSRTLDSQMDFDIDLAKKQSSDNPVYY 433 Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513 +QYA AR S+F QAK+ + EL L+ + Y +I+ A Sbjct: 434 IQYANARIHSLFAQAKEAGVKWG----DWEKTDFTKLTEECELDLVKKMENYHMLIDGAA 489 Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573 + P ++A Y Y+LA +FH + R + +T RL L+ AV ++ Sbjct: 490 KERAPQRIAKYAYELAGLFHHFYRECR-------ILGVEEGVTQARLGLITAVQHVLVHA 542 Query: 574 LNIIGVESPNEM 585 L+I+GV +P M Sbjct: 543 LSILGVSAPERM 554 >gi|222109552|ref|YP_002551816.1| arginyl-tRNA synthetase [Acidovorax ebreus TPSY] gi|254782960|sp|B9MBD2|SYR_DIAST RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|221728996|gb|ACM31816.1| arginyl-tRNA synthetase [Acidovorax ebreus TPSY] Length = 567 Score = 525 bits (1352), Expect = e-146, Method: Composition-based stats. Identities = 182/597 (30%), Positives = 293/597 (49%), Gaps = 51/597 (8%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 L L + K+ R E P+ AHG L+ AAM L++PL +P + E Sbjct: 4 VKQELLAALADELEKVSPGAG--SRAAFESPKVAAHGDLACTAAMQLAKPLKQNPRALGE 61 Query: 67 LIVARIKIDPDVDS----VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 + A ++ P + IAG GF+N+ L P+ ++++ ++ G +YG +G K Sbjct: 62 QLQAALEATPAFQKWVQAIEIAGPGFLNIRLKPAAKQQVVREVLAQGAQYGYQPA-RGEK 120 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V +EFVSANPTGP+HVGH R A +GD ++ L A G+ V RE+Y NDAG QI+TL S Sbjct: 121 VLVEFVSANPTGPLHVGHGRQAAIGDAISHLYATQGWSVHREFYYNDAGVQIDTLTKSTQ 180 Query: 183 WRYQQALYNND-------SDLPEGYYPGVYLKHVGKELADKY-----SSELLNFPEEKWL 230 R + +D + L + +Y G Y++ + K + + Sbjct: 181 LRAKGFKPGDDCWPTDSENPLAKNFYNGDYIQDIADAFLAKATVQADDRAFTANGDVEDY 240 Query: 231 PIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGI 290 ++ ++V + DL+A N+Q D + E + + + L G YE Sbjct: 241 ENIRQFAVAYLRNEQDKDLQAFNLQFDQYYLESSLYAN--GHVDATVQRLVANGKTYE-- 296 Query: 291 LPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFD 350 L +ST GDD DR + K DG+YTYF D+AY K++RGF Sbjct: 297 --------------QDGALWLKSTDYGDDKDRVMRKQDGTYTYFVPDVAYHIQKFQRGFT 342 Query: 351 NMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 ++ + G+DH G + R+ A A V + + +L +VR+ R+G +K+SKRAG ++ Sbjct: 343 KVVNIQGTDHHGTIARVRAGLQAADVGIPQGYPDYVLHTMVRVVRNGEEVKISKRAGSYV 402 Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 TLR +++ D+VRF +L RK FD Q+ +NPV+YVQYA+AR S+ R Sbjct: 403 TLRDLIEWTSKDAVRFFLLSRKPDTEYTFDVDLAVAQNNDNPVYYVQYAHARICSVLRGW 462 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 ++ D+D+ + L++ LA+YP ++ A P+ + FYL DL Sbjct: 463 RE-----DYDVAALRDVDLSPLEGPQAQALMLLLAKYPEMLTAAAAGNAPHDVTFYLRDL 517 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A+ +H ++ R + ++ + RL LV A A ++++GL ++GV +P M Sbjct: 518 AAAYHSYYDAER-------ILVDDEAVKQARLALVAATAQVLHNGLAVLGVSAPARM 567 >gi|291287007|ref|YP_003503823.1| arginyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809] gi|290884167|gb|ADD67867.1| arginyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809] Length = 549 Score = 524 bits (1351), Expect = e-146, Method: Composition-based stats. Identities = 185/579 (31%), Positives = 307/579 (53%), Gaps = 34/579 (5%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 S L ++++ + +E + IE P + HG + NAAM +R P+ IA+ Sbjct: 5 LQSLLDTAIEDMIKENGLEGSV-PEYTIEVPNNSEHGDFAANAAMKSARIFRTKPMDIAK 63 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 + R+K P + GFIN ++ + ++ + + +G+ K +E Sbjct: 64 KLCERVK-HPMIKKSEAVMPGFINFFIDNGFYHDVVKRAATDDSFF-ESDMGQKRKTMVE 121 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+HVGH R A GD+LA ++A +G++V EYY+NDAG Q+N L S++ RY Sbjct: 122 FVSANPTGPLHVGHGRNAAYGDSLAKILAAAGFDVHTEYYVNDAGNQMNNLGKSIYVRYM 181 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 + L + PE Y G Y+ + KEL +++ ++ PE++ + ++ + I Sbjct: 182 E-LAGGEIPFPEDGYHGEYIIDIAKELFEEHGHKIAEMPEKEGTDVCFKKGLKDITANIA 240 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 + LK + + + SE + + + +D L +G++YE Sbjct: 241 NTLKNFKVDMEEYFSEKSLY--ENGDVPASLDYLKERGFIYEL----------------D 282 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366 L F+ST GDD DR + +S+G YTYFA+D+AY K KY+RGF I V G+DH GYVKR Sbjct: 283 GALWFKSTEFGDDKDRVVKRSNGEYTYFASDIAYHKNKYDRGFKTTIDVWGADHHGYVKR 342 Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 L + A+ + + V L ++V L G + MS RAG FI L +++EVGSD+ R+ Sbjct: 343 LSSAIEAIGYEDREFAVSLIQMVNLVNGGERVSMSTRAGSFIELDWLINEVGSDASRYFY 402 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 R DFD K++ +NPVFY+QYA+AR +S+ R+A + + Sbjct: 403 SMRDYEAQFDFDIALAKKRESDNPVFYIQYAHARVQSVLRKAAEENIAYEI------CAG 456 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 ++ EL+LI + +Y V+E + ++P+++ +YL +LA++FH ++ + + Sbjct: 457 LDNLNSKEELELIKKIYDYINVLEQSARNRQPHRVGYYLQELAAMFHSYYFNN------K 510 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++N+ LT RL L AV + I +GL ++GV +P+ M Sbjct: 511 MLNSDNKDLTSARLTLAQAVGNTIRNGLALLGVSAPDRM 549 >gi|73748954|ref|YP_308193.1| arginyl-tRNA synthetase [Dehalococcoides sp. CBDB1] gi|109894987|sp|Q3ZYF0|SYR_DEHSC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|73660670|emb|CAI83277.1| arginyl-tRNA synthetase [Dehalococcoides sp. CBDB1] Length = 556 Score = 524 bits (1351), Expect = e-146, Method: Composition-based stats. Identities = 197/589 (33%), Positives = 316/589 (53%), Gaps = 37/589 (6%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILD---RIVIERPRDCAHGHLSTNAAMILSRPL 57 M + + L + K + E +I I IE P+ +G +T+ + L++ Sbjct: 1 MNSILAIKNIIIESLSQAMEKARQEGQIPALSVDISIEHPQKTNYGDYATSLPLRLAKAT 60 Query: 58 GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117 G P+ +A+++ + I+ + V +A GFIN S +L ++ +I+ YG + Sbjct: 61 GKRPMELAQILASYIETGSGISKVSVAPPGFINFTFSKEWLCSLVKTILTEAGSYGNINM 120 Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 G G++V IEFVSANPTGP+H+GH R AV+G TL++++ +GY V E+YINDAG+QI+ Sbjct: 121 GGGSRVQIEFVSANPTGPIHIGHGRGAVLGSTLSNILKAAGYYVEEEFYINDAGSQIDAF 180 Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237 ++F RYQQAL D+ +P+ Y G Y+ + E+ KY + L P + + + Sbjct: 181 KRTLFARYQQAL-GKDAAVPQDGYHGQYMVDLAAEMVTKYGDKYLQMPADIAQNDLGEIG 239 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 + M+ +I DDLKAL + DI+ SE + G + +D L+ Y+ E Sbjct: 240 MARMLCLISDDLKALKVDFDIWFSERSLYSG--GQYKTAMDILSGNNYIAE--------- 288 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVM 356 F ST++GD D +++SDG+ TYFA+D+AY K+ ER FD +I + Sbjct: 289 -------RDNATWFSSTLLGDSKDNVIVRSDGTPTYFASDIAYHYNKFIERKFDRVINIW 341 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G+DH G+V R++A+ +A+ ++ LL +++ L R G +++SKR G+ I+LR V++E Sbjct: 342 GADHQGHVSRMKAMVSALGINPERLTTLLFQMITLKRGGELVRLSKRTGEIISLREVIEE 401 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG+D+ RF L R +DFD K++S ENPV+YVQYA+AR SI A + D Sbjct: 402 VGADACRFFFLARSTESQMDFDLELAKKESAENPVYYVQYAHARICSILHLAAEKQLDYS 461 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 E E I +AE P ++E + EP+ L +Y +LA+ FH + Sbjct: 462 TGDTDLLGEEAELEL-------IRKMAELPEIVETVSRTLEPHHLTYYAQELANAFHQFY 514 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R V ++N +LT RL+LV A ++ L+++G+ SP M Sbjct: 515 KDCR-------VISDNAELTCARLKLVDASRIVLARTLHLMGMTSPESM 556 >gi|320534480|ref|ZP_08034950.1| arginyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337] gi|320133311|gb|EFW25789.1| arginyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str. F0337] Length = 561 Score = 524 bits (1350), Expect = e-146, Method: Composition-based stats. Identities = 191/587 (32%), Positives = 305/587 (51%), Gaps = 37/587 (6%) Query: 6 DFSSRLKNYLKEIDCKI--KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 + ++ ++ L+E + + + +ERPR+ HG STN AM L++ G P Sbjct: 5 ELAAAIRTVLEEASAEGSLALPAAEIPDPRVERPRNRDHGDWSTNVAMQLAKKAGTKPRD 64 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +AEL+V R++ + SV +AG GF+N+ L + ++ SIV +G YGRN G + Sbjct: 65 LAELLVPRLEALNGIASVEVAGPGFLNIRLDAASAGELARSIVEAGEAYGRNDSLSGQHI 124 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+E+VSANPTGP+H+G R A VGD+LA +++ G EVTREYY ND G QI+ A S+ Sbjct: 125 NLEYVSANPTGPVHLGGARWAAVGDSLARILSACGAEVTREYYFNDHGTQIDRFARSLLA 184 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKEL-ADKYSS---ELLNFPEEKWLPIVKDYSVQ 239 + PE Y G Y+ + +++ AD+ ++ + P+ + + + V Sbjct: 185 SAR------GEQTPEDGYGGAYISEIAQQVTADELAAGRPDPATLPDVEATEVFRSRGVD 238 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M ++ +L A D+F ED H + I L +G + Sbjct: 239 LMFAAVKAELHAFRSDFDVFFHEDSLHT--SGAVERAITRLRERGVI------------- 283 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + R+T GDD DR L+KSDG+ YFAADLAY+ K ERG D +Y+ G+D Sbjct: 284 ---EERDGATWLRTTDFGDDKDRVLIKSDGNAAYFAADLAYYLDKRERGADCALYLFGAD 340 Query: 360 HSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 H GY+ R+ A+ AA + + +L+ +LV L R+G+P++MSKRAG + L +VD VG Sbjct: 341 HHGYIGRMMAMCAAFGDTPGTNMQILIGQLVNLVRNGVPVRMSKRAGTIVILEDLVDAVG 400 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ + ++D D + + +NPV+YVQYA+AR R++ R A + D + Sbjct: 401 VDAARYALARSSMDSMIDIDLDLLASSTSDNPVYYVQYAHARTRNVARNAAEHGVSRDPN 460 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 P + D + L + LA++P + A +E +++A YL LA+ +H + Sbjct: 461 EAPFEPAALDDPADAALLGV---LAQFPATVAQAASLREQHRVARYLEQLAAAYHAWYGA 517 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R PR + + RL L AV ++ +GL ++GV +P M Sbjct: 518 TRVTPRGDDAVGSG---HVARLWLNDAVGQVLANGLGLLGVAAPERM 561 >gi|293611162|ref|ZP_06693460.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826413|gb|EFF84780.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 596 Score = 524 bits (1350), Expect = e-146, Method: Composition-based stats. Identities = 188/629 (29%), Positives = 316/629 (50%), Gaps = 77/629 (12%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L + ++ + + + + + R +D +HG ++N AMI S+ G+ Sbjct: 1 MN--TAIQAALDHAVQTLQQEGVLPSDWKNTSNLTRTKDRSHGDFASNIAMIGSKAAGMK 58 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE ++A + D+ IAG GFIN +L+ IL I +GR+ Sbjct: 59 PRDLAEKVLAALPEVADISKAEIAGPGFINFFLNADQRFAILDQIQAQKEIFGRSQANAA 118 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 K+ +EFVSANPT +HVGH R A G T+A+L+ +G +V REYY+NDAG Q++ LA S Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVANLLEATGAKVDREYYVNDAGRQMDILATS 178 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS--------------ELLNFPE 226 + RY + L N P+ Y G Y+K + + + DK E + + E Sbjct: 179 TYLRYLELLGQNLV-FPKNAYQGDYVKEIAQGIIDKDGDAYVREVANVYKDVPEDVQYAE 237 Query: 227 E------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 E + + ++ A++ I+DDL + Sbjct: 238 ELDSEGNKVVLSGDKEKHIDGLIANSQQLLGEGYRVFHQAALHAILDDIKDDLADFGVTF 297 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 + + SE + I + ++ L ++G++Y+ + F+ST Sbjct: 298 NQWFSEASL----SAKIDEALETLDQRGFLYQ----------------KDGNIWFKSTEF 337 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GD+ DR + + +G TYFA+D+AY K +RG+ ++I + GSDH GY+ R++A A+ Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDLIDIWGSDHHGYISRVKAAIDAMGY 397 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 ++ VLL + V L+R G ++MS R+G F+TLR + EVG+D+ RF + RK+ + +D Sbjct: 398 DSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD QSK+N V+Y+QYA+AR + +A + DL FD+ D +E+ Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARICRMLEKA--VSTDLQFDVNAARPHAARLSLD-AEI 514 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +++ LA YP + A A EP+++ YL +LA++FHG ++ + V +++ +LT Sbjct: 515 EILAKLAAYPDTVLRAANAYEPHQVGNYLKELAALFHGWYNEHK-------VLSDDAELT 567 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L V ++ +GL ++GV +P M Sbjct: 568 QARLLLSINVQQVLRNGLELLGVSAPESM 596 >gi|68536439|ref|YP_251144.1| arginyl-tRNA synthetase [Corynebacterium jeikeium K411] gi|68264038|emb|CAI37526.1| argS [Corynebacterium jeikeium K411] Length = 592 Score = 524 bits (1350), Expect = e-146, Method: Composition-based stats. Identities = 181/585 (30%), Positives = 292/585 (49%), Gaps = 36/585 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 A+ S + + ++ ++ +ERPR+ HG +TN AM +++ G +P Sbjct: 40 AELSELITETARTTLDAHGLDSSVVPESATVERPRNPEHGDYATNIAMQVAKKAGTNPRE 99 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 + + +D +AG GFIN+ L+ + KI+ I+ G +G G + Sbjct: 100 FGTWLAESLGAHEGIDEATVAGPGFINIRLAAAAQGKIVEDILTVGANFGHGDELAGAAI 159 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++ G +VTREYY ND GAQI+ A S+ Sbjct: 160 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLNARGAKVTREYYFNDHGAQIDRFARSLVA 219 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y++ + ++ + + + ++ + + V+ M Sbjct: 220 AAK------GEPTPEDGYGGDYIQDIASQIV-EANPDWQKLGADEAQELFRSQGVELMFA 272 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L + D++ E+ + + I + G +YE Sbjct: 273 HIKRTLAEFGTEFDVYFHENSLF--ESGAVEAAIQKIKDNGNLYEA-------------- 316 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 RST GDD DR ++KSDG+ Y A D+AY K++RG + IY++G+DH GY Sbjct: 317 --DGAWWLRSTNFGDDKDRVVIKSDGNAAYIAGDIAYVADKFDRGHNLCIYMLGADHHGY 374 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL A AAA+ Q+ VL+ +LV L +DG ++MSKRAG ITL +V+ +G D+ R Sbjct: 375 IARLRAAAAAMGYDPQQVEVLIGQLVNLVKDGKAVRMSKRAGTVITLDDLVEAIGVDAAR 434 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + M+ LD D +S +NPVFYVQYA+AR S+ R+A+D+ + + + Sbjct: 435 YAMIRSSVDSSLDIDMDLWASKSNDNPVFYVQYAHARLCSLARKAEDLG--VTREGADLS 492 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ + E D LI L E+P V++ A +EP+++A Y LA FH + + P Sbjct: 493 LLTHDREGD-----LIRTLGEFPAVVKTAAELREPHRVARYAESLAGTFHRFYDACQILP 547 Query: 544 RLRFVQ---ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + A N+ L RL L A + + L ++GV +P M Sbjct: 548 KPSDDEQTVAENKALFAARLSLAAASRQTLANALELLGVAAPERM 592 >gi|323516220|gb|ADX90601.1| arginyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715] Length = 596 Score = 524 bits (1350), Expect = e-146, Method: Composition-based stats. Identities = 185/629 (29%), Positives = 311/629 (49%), Gaps = 77/629 (12%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L + ++ + + + + + R +D +HG ++N AMI S+ G+ Sbjct: 1 MN--TAIQAALDHAVQTLQQEGVLPSDWNNSSNLTRTKDRSHGDFASNIAMIGSKAAGMK 58 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE I+A + D+ IAG GFIN +L+ IL I +GR+ Sbjct: 59 PRDLAEKILAALPEVADISKAEIAGPGFINFFLNADQRFAILDQIQAQKESFGRSQSNAA 118 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 K+ +EFVSANPT +HVGH R A G T+A+L+ +G +V REYY+NDAG Q++ LA S Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVANLLEATGAKVDREYYVNDAGRQMDILATS 178 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS--------------ELLNFPE 226 + RY + L N P+ Y G Y+K + + + DK E + + E Sbjct: 179 TYLRYLELLGQNLV-FPKNAYQGDYVKEIAQGIIDKDGDAYVREVANVYKDVPEDVQYAE 237 Query: 227 E------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 E + + ++ A++ I+DDL + Sbjct: 238 ELDSEGNKVVLSGDKEKHIDGLIANSQQLLGEGYRVFHQAALHAILDDIKDDLADFGVTF 297 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 + + SE + I + ++ L ++G++YE + F+ST Sbjct: 298 NQWFSEASL----SAKIEEALETLDQRGFLYE----------------KDGNIWFKSTEF 337 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GD+ DR + + +G TYFA+D+AY K +RG+ +++ + GSDH GY+ R++A A+ Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDLVDIWGSDHHGYISRVKAAIDAMGY 397 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 ++ VLL + V L+R G ++MS R+G F+TLR + EVG+D+ RF + RK+ + +D Sbjct: 398 DSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD QSK+N V+Y+QYA+AR + +A + + +E Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARICRMLEKAASTGLQFEVSAARSHAA---RLSLDAET 514 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +++ LA YP V+ A A EP+++ YL +LA++FHG ++ + V +++ +LT Sbjct: 515 EILAKLAAYPDVVLRAANAYEPHQVGNYLKELAALFHGWYNEHK-------VLSDDAELT 567 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L V ++ +GL ++GV +P M Sbjct: 568 QARLLLSINVQQVLRNGLELLGVSAPEAM 596 >gi|169797659|ref|YP_001715452.1| arginyl-tRNA synthetase [Acinetobacter baumannii AYE] gi|184156483|ref|YP_001844822.1| arginyl-tRNA synthetase [Acinetobacter baumannii ACICU] gi|213155547|ref|YP_002317592.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB0057] gi|215485013|ref|YP_002327254.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB307-0294] gi|239503058|ref|ZP_04662368.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB900] gi|260557602|ref|ZP_05829816.1| arginyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606] gi|301347274|ref|ZP_07228015.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB056] gi|301510644|ref|ZP_07235881.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB058] gi|301597695|ref|ZP_07242703.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB059] gi|332852639|ref|ZP_08434293.1| arginine--tRNA ligase [Acinetobacter baumannii 6013150] gi|332869354|ref|ZP_08438732.1| arginine--tRNA ligase [Acinetobacter baumannii 6013113] gi|226701370|sp|B7H2A9|SYR_ACIB3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|226701511|sp|B7I1U9|SYR_ACIB5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|229558748|sp|B2I0Y7|SYR_ACIBC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|229558750|sp|B0VBN5|SYR_ACIBY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|169150586|emb|CAM88495.1| arginyl-tRNA synthetase [Acinetobacter baumannii AYE] gi|183208077|gb|ACC55475.1| Arginyl-tRNA synthetase [Acinetobacter baumannii ACICU] gi|213054707|gb|ACJ39609.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB0057] gi|213987391|gb|ACJ57690.1| arginyl-tRNA synthetase [Acinetobacter baumannii AB307-0294] gi|260408775|gb|EEX02079.1| arginyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606] gi|322506351|gb|ADX01805.1| argS [Acinetobacter baumannii 1656-2] gi|332729107|gb|EGJ60454.1| arginine--tRNA ligase [Acinetobacter baumannii 6013150] gi|332732772|gb|EGJ63988.1| arginine--tRNA ligase [Acinetobacter baumannii 6013113] Length = 596 Score = 524 bits (1350), Expect = e-146, Method: Composition-based stats. Identities = 185/629 (29%), Positives = 311/629 (49%), Gaps = 77/629 (12%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L + ++ + + + + + R +D +HG ++N AMI S+ G+ Sbjct: 1 MN--TAIQAALDHAVQTLQQEGVLPSDWNNSSNLTRTKDRSHGDFASNIAMIGSKAAGMK 58 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE I+A + D+ IAG GFIN +L+ IL I +GR+ Sbjct: 59 PRDLAEKILAALPEVADISKAEIAGPGFINFFLNADQRFAILDQIQAQKESFGRSQSNAA 118 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 K+ +EFVSANPT +HVGH R A G T+A+L+ +G +V REYY+NDAG Q++ LA S Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVANLLEATGAKVDREYYVNDAGRQMDILATS 178 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS--------------ELLNFPE 226 + RY + L N P+ Y G Y+K + + + DK E + + E Sbjct: 179 TYLRYLELLGQNLV-FPKNAYQGDYVKEIAQGIIDKDGDAYVREVANVYKDVPEDVQYAE 237 Query: 227 E------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 E + + ++ A++ I+DDL + Sbjct: 238 ELDSEGNKVVLSGDKEKHIDGLIANSQQLLGEGYRVFHQAALHAILDDIKDDLADFGVTF 297 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 + + SE + I + ++ L ++G++YE + F+ST Sbjct: 298 NQWFSEASL----SAKIDEALETLDQRGFLYE----------------KDGNIWFKSTEF 337 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GD+ DR + + +G TYFA+D+AY K +RG+ +++ + GSDH GY+ R++A A+ Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDLVDIWGSDHHGYISRVKAAIDAMGY 397 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 ++ VLL + V L+R G ++MS R+G F+TLR + EVG+D+ RF + RK+ + +D Sbjct: 398 DSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD QSK+N V+Y+QYA+AR + +A + + +E Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARICRMLEKAASTGLQFEVSAARSHAA---RLSLDAET 514 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +++ LA YP V+ A A EP+++ YL +LA++FHG ++ + V +++ +LT Sbjct: 515 EILAKLAAYPDVVLRAANAYEPHQVGNYLKELAALFHGWYNEHK-------VLSDDAELT 567 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L V ++ +GL ++GV +P M Sbjct: 568 QARLLLSINVQQVLRNGLELLGVSAPEAM 596 >gi|147669721|ref|YP_001214539.1| arginyl-tRNA synthetase [Dehalococcoides sp. BAV1] gi|189083531|sp|A5FQ65|SYR_DEHSB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|146270669|gb|ABQ17661.1| arginyl-tRNA synthetase [Dehalococcoides sp. BAV1] Length = 556 Score = 524 bits (1350), Expect = e-146, Method: Composition-based stats. Identities = 197/589 (33%), Positives = 317/589 (53%), Gaps = 37/589 (6%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILD---RIVIERPRDCAHGHLSTNAAMILSRPL 57 M + + L + K + E +I I IE P+ +G +T+ + L++ Sbjct: 1 MNSILAIKNIVIESLSQAMEKARQEGQIPALSVDISIEHPQKTNYGDYATSLPLRLAKAT 60 Query: 58 GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117 G P+ +A+++ + I+ + V +A GFIN S +L ++ +I+ YG + Sbjct: 61 GKRPMELAQILASYIETGSGISKVSVAPPGFINFTFSKEWLCSLVKTILTEAGSYGNINM 120 Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 G G++V IEFVSANPTGP+H+GH R AV+G TL++++ +GY V E+YINDAG+QI+ Sbjct: 121 GGGSRVQIEFVSANPTGPIHIGHGRGAVLGSTLSNILKAAGYYVEEEFYINDAGSQIDAF 180 Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237 ++F RYQQAL D+ +P+ Y G Y+ + E+ KY + L P + + + Sbjct: 181 KRTLFARYQQAL-GKDAAVPQDGYHGQYMVDLAAEMVTKYGDKYLQMPADIAQNDLGEIG 239 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 + M+ +I DDLKAL + DI+ SE + G + +D L+ Y+ E Sbjct: 240 MARMLCLISDDLKALKVDFDIWFSERSLYSG--GQYKTAMDILSGNNYIAE--------- 288 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVM 356 F ST++GD D +++SDG+ TYFA+D+AY K+ ER FD +I + Sbjct: 289 -------RDNATWFSSTLLGDSKDNVIVRSDGTPTYFASDIAYHYNKFIERKFDRVINIW 341 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G+DH G+V R++A+ +A+ ++ LL +++ L R G +++SKR G+ I+LR V++E Sbjct: 342 GADHQGHVSRMKAMVSALGINPERLTTLLFQMITLKRGGELVRLSKRTGEIISLREVIEE 401 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG+D+ RF L R +DFD K++S ENPV+YVQYA+AR SI A++ D Sbjct: 402 VGADACRFFFLARSTESQMDFDLELAKKESAENPVYYVQYAHARICSILHLAEEKQLDYS 461 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 E E I +AE P ++E + EP+ L +Y +LA+ FH + Sbjct: 462 TGDTALLGEEAELEL-------IRKMAELPEIVETVSRTLEPHHLTYYAQELANAFHQFY 514 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R V ++N +LT RL+LV A ++ L+++G+ SP M Sbjct: 515 KDCR-------VISDNAELTCARLKLVDASRIVLARTLHLMGMTSPESM 556 >gi|169632154|ref|YP_001705890.1| arginyl-tRNA synthetase [Acinetobacter baumannii SDF] gi|229558749|sp|B0VNJ1|SYR_ACIBS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|169150946|emb|CAO99561.1| arginyl-tRNA synthetase [Acinetobacter baumannii] Length = 596 Score = 524 bits (1349), Expect = e-146, Method: Composition-based stats. Identities = 185/629 (29%), Positives = 311/629 (49%), Gaps = 77/629 (12%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L + ++ + + + + + R +D +HG ++N AMI S+ G+ Sbjct: 1 MN--TAIQAALDHAVQTLQQEGVLPSDWNNSSNLTRTKDRSHGDFASNIAMIGSKAAGMK 58 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE I+A + D+ IAG GFIN +L+ IL I +GR+ Sbjct: 59 PRDLAEKILAALPEVADISKAEIAGPGFINFFLNADQRFAILDQIQAQKESFGRSQSNVA 118 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 K+ +EFVSANPT +HVGH R A G T+A+L+ +G +V REYY+NDAG Q++ LA S Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVANLLEATGAKVDREYYVNDAGRQMDILATS 178 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS--------------ELLNFPE 226 + RY + L N P+ Y G Y+K + + + DK E + + E Sbjct: 179 TYLRYLELLGQNLV-FPKNAYQGDYVKEIAQGIIDKDGDAYVREVANVYKDVPEDVQYAE 237 Query: 227 E------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 E + + ++ A++ I+DDL + Sbjct: 238 ELDSEGNKVVLSGDKEKHIDGLIANSQQLLGEGYRVFHQAALHAILDDIKDDLADFGVTF 297 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 + + SE + I + ++ L ++G++YE + F+ST Sbjct: 298 NQWFSEASL----SAKIDEALETLDQRGFLYE----------------KDGNIWFKSTEF 337 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GD+ DR + + +G TYFA+D+AY K +RG+ +++ + GSDH GY+ R++A A+ Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDLVDIWGSDHHGYISRVKAAIDAMGY 397 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 ++ VLL + V L+R G ++MS R+G F+TLR + EVG+D+ RF + RK+ + +D Sbjct: 398 DSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD QSK+N V+Y+QYA+AR + +A + + +E Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARICRMLEKAASTGLQFEVSAARSHAA---RLSLDAET 514 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +++ LA YP V+ A A EP+++ YL +LA++FHG ++ + V +++ +LT Sbjct: 515 EILAKLAAYPDVVLRAANAYEPHQVGNYLKELAALFHGWYNEHK-------VLSDDAELT 567 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L V ++ +GL ++GV +P M Sbjct: 568 QARLLLSINVQQVLRNGLELLGVSAPEAM 596 >gi|311103352|ref|YP_003976205.1| arginyl-tRNA synthetase [Achromobacter xylosoxidans A8] gi|310758041|gb|ADP13490.1| arginyl-tRNA synthetase [Achromobacter xylosoxidans A8] Length = 560 Score = 524 bits (1349), Expect = e-146, Method: Composition-based stats. Identities = 183/585 (31%), Positives = 294/585 (50%), Gaps = 48/585 (8%) Query: 14 YLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIK 73 L + + + + +++ERP+ AHG ++TN AM L++P +P +A+ IV + Sbjct: 11 SLIQAAVAQSLPDAVAN-VLLERPKVAAHGDVATNVAMQLAKPARRNPRELAQAIVDALM 69 Query: 74 IDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVS 129 P ++S IAG GFINL ++ + + +++++ G +GR+ G K+ +EFVS Sbjct: 70 AQPGAAGLIESAEIAGPGFINLRITAAARQAVIAAVAEQGAAFGRS-PRSGEKILVEFVS 128 Query: 130 ANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL 189 ANPTGP+HVGH R A +GD L L G++VTRE+Y NDAG QI+ LA+SV R + L Sbjct: 129 ANPTGPLHVGHARQAALGDALCRLYDAIGWDVTREFYYNDAGNQIHNLAISVQARAR-GL 187 Query: 190 YNNDSDLPEGYYPGVYLKHVGKELADKY-----SSELLNFPEEKWLPIVKDYSVQAMMKI 244 D P Y G Y+ + ++ +++ + L ++ ++V + + Sbjct: 188 TTESPDWPVDGYKGDYIADIARDFQAGATVHSDGVDVIATGDVDNLDDIRVFAVAYLRRE 247 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 DL+A + D + E + + + L G+ YE Sbjct: 248 QDLDLQAFGLAFDNYYLESSLYT--SGRVEATVKALVAGGHTYE---------------- 289 Query: 305 DRKQLLFRSTMVG--DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 + L R+T +G DD DR + KS+G YTYF D+AY K K+ERGF + + GSDH G Sbjct: 290 EGGALWLRTTELGTGDDKDRVMRKSEGGYTYFVPDVAYHKAKWERGFHRAVNIQGSDHHG 349 Query: 363 YVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 V R+ A A+ K +L ++V++ R G +K+SKRAG ++T+R ++D VG D Sbjct: 350 TVARVRAGLQALEEGIPKDYPAYVLHKMVKVMRGGEEVKISKRAGSYVTMRDLIDWVGRD 409 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +VR+ ++ R+ FD +S ENPV+Y+QYA+AR S+ A Sbjct: 410 AVRYFLIQRRADTEFVFDVDLALSKSDENPVYYIQYAHARICSVINNAA-------MPAA 462 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 +E L+ LAE+P V+ A P+ +AF+L D AS FH + R Sbjct: 463 DVAQADAALLTAPTEFALMQRLAEFPNVVALAAQELSPHHIAFWLRDCASDFHAWYGAER 522 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V ++ L + RL+L ++ +GL ++GV +P M Sbjct: 523 -------VLIDDTALKLARLRLASTTRQVLANGLELMGVSAPERM 560 >gi|262374635|ref|ZP_06067908.1| arginyl-tRNA synthetase [Acinetobacter junii SH205] gi|262310425|gb|EEY91516.1| arginyl-tRNA synthetase [Acinetobacter junii SH205] Length = 599 Score = 523 bits (1348), Expect = e-146, Method: Composition-based stats. Identities = 191/629 (30%), Positives = 313/629 (49%), Gaps = 74/629 (11%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M S L + ++ + + + + + R +D +HG ++N AMI S+ G+ Sbjct: 1 MN--TAIQSALDHAVQSLQQQGILPSDWTNTSHLTRTKDRSHGDFASNIAMIGSKAAGMK 58 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE I+A + D+ IAG GFIN +L+ +L I +YGR+ + Sbjct: 59 PRDLAEKILAALPEVADISKAEIAGPGFINFFLNADQRFAVLDQIQAQKDQYGRSQVNAA 118 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 K+ +EFVSANPT +HVGH R A G T+A+L+ +G +V REYY+NDAG Q++ LA S Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVANLLEATGAKVDREYYVNDAGRQMDILATS 178 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS--------------ELLNFPE 226 + RY + L P+ Y G Y+K + + + DK E + + E Sbjct: 179 TYLRYLE-LTGQILVFPKNAYQGDYVKEIAQSIIDKDGDAHVRPVADIYKDVPEDVQYAE 237 Query: 227 E------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 E + + ++ A++ I+DDL + Sbjct: 238 ELDADGNKVVLSGDKEKHIDGLIANSQQHLGEGYRVFHQAALHAILDDIKDDLADFGVTF 297 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D + SE I + + L ++G++YE + F+ST Sbjct: 298 DQWFSEASL----ADKIDEALATLDQRGFLYE----------------KDGNIWFKSTEF 337 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GD+ DR + + +G TYFA+D+AY K +RG+ ++I + GSDH GY+ R++A A+ Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDLIDIWGSDHHGYISRVKAAIDAMGY 397 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 ++ VLL + V L+R G ++MS R+G F+TLR + EVG+D+ RF + RK+ + +D Sbjct: 398 DSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD QSK+N V+Y+QYA+AR SI +AK+ D + + +E Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARVNSIVNRAKEKGIVFDATNARQFA---DLLTLETET 514 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +++ LA YP ++ A EP+++ YL DLA++FHG ++ ++FV N L+ Sbjct: 515 EILAKLAAYPEIVVRAANVCEPHQIGNYLKDLAALFHGWYAQ----DGVKFVDETNTSLS 570 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L V ++ +GL ++GV +P+ M Sbjct: 571 QARLLLSTNVQQVLRNGLELLGVSAPDSM 599 >gi|225850150|ref|YP_002730384.1| arginyl-tRNA synthetase [Persephonella marina EX-H1] gi|225646328|gb|ACO04514.1| arginyl-tRNA synthetase [Persephonella marina EX-H1] Length = 552 Score = 523 bits (1348), Expect = e-146, Method: Composition-based stats. Identities = 200/584 (34%), Positives = 331/584 (56%), Gaps = 33/584 (5%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + ++ LK+ +I ++ ++I +E P++ G +S NAA +LS+ L PL Sbjct: 1 MKEELKKKIVELLKDEIPQI---SEVEEKIKVEIPKEDRFGDISINAAFLLSKILRDKPL 57 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 IA+ I ++ + V +AG GFIN++LS + IL I+ YGR+ +G Sbjct: 58 NIAQRIKNILENVEEFSKVEVAGAGFINIFLSRKFYADILKRIIQEKENYGRSEKKEGYI 117 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 N+EFVSANPTGP+H+GH R AVVG+ +++L ++GY V RE+YINDAG QI L SV+ Sbjct: 118 -NVEFVSANPTGPLHLGHGRGAVVGNVVSNLYEYAGYTVEREFYINDAGRQIYKLGESVY 176 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF-PEEKWLPIVKDYSVQAM 241 R++Q + D PE Y G Y+K + + L ++L+ E++ + +++ + Sbjct: 177 ARFRQ-IDQPDYPFPEDGYHGEYIKEIAQHLYKYEKEKILSMVDEKQAIDFCSEFAKDML 235 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 ++ I++DLK + DI+ SE + + + I+ L ++G +YE Sbjct: 236 LERIKEDLKEFGVTFDIWFSERSLY--SSGKVDEAIEFLRKKGLIYE------------- 280 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 + ++T+ GDD DR ++KSDGSYTYFA D+AY K++RG+D +I V G+DH Sbjct: 281 ---KEGAVWVKTTLFGDDKDRVIIKSDGSYTYFAGDIAYHYDKFKRGYDFIINVWGADHH 337 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 GY RL++ A ++ I V+ +LV+L+++G IKMSKR+G F+TL+ ++DEVG D+ Sbjct: 338 GYFPRLKSAVMAFGVREDWIRVIFIQLVKLFKEGKEIKMSKRSGSFVTLKELIDEVGKDA 397 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 V + L + L+FD ++S ENPV+YVQYA+AR S+FR+AK+ F + F Sbjct: 398 VIYFFLTKDPDTHLNFDIDLALKKSSENPVYYVQYAHARICSVFREAKERFGFDPENDFD 457 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 ++ + + E ++ HL+ P +I A + ++P+KL YDLAS FH ++++ Sbjct: 458 ADI---DLLKEDQERVIMKHLSFIPDLIMEAALKEQPHKLTQITYDLASDFHYYYNN--- 511 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +F+ + KL RL L+ AV + + ++G+ M Sbjct: 512 ---FKFLVEEDEKLMRARLYLLKAVREALRTLFKLMGITPVERM 552 >gi|312126952|ref|YP_003991826.1| arginyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108] gi|311776971|gb|ADQ06457.1| arginyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108] Length = 561 Score = 523 bits (1348), Expect = e-146, Method: Composition-based stats. Identities = 199/592 (33%), Positives = 320/592 (54%), Gaps = 38/592 (6%) Query: 1 MYLFA----DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRP 56 M L ++N +K K E + I+IE+P++ +HG +TN AM L+R Sbjct: 1 MNLVKIAKQQIQDVVQNAIKSCIDKGIFELDSIPDIMIEKPKEKSHGDFATNIAMELTRK 60 Query: 57 LGLDPLTIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115 L +P IA IV I + + ++ V +AG GFIN + +L K++ I+ G +YG+ Sbjct: 61 LKKNPREIANGIVNAIDLSNTFIEKVEVAGPGFINFFFKKDWLYKVVDVILSEGDDYGKV 120 Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175 IG G KV +EFVSANPTGPMH+G+ R +GD LA+L+ ++GY VT+E+Y+NDAG QI Sbjct: 121 NIGNGKKVMVEFVSANPTGPMHMGNARGGALGDCLANLLKWAGYNVTKEFYVNDAGNQIE 180 Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235 S+ RY+Q L + LPE Y G + KE D++ +L N ++ + D Sbjct: 181 KFGQSLEIRYRQ-LKGENIVLPEDCYHGEDIIERVKEYLDEHGDDLENLSSDERRKKLVD 239 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 ++++ + ++++ L+ I++D++ E + + + + I++L +GY YE Sbjct: 240 FALKRNILLMKEHLRKYGIEYDVWFHESSLY--ESGEVFETIEDLKSRGYTYE------- 290 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDD-VDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMI 353 L F ++ + D L++++G TYFAAD+AY + K+E RGFD +I Sbjct: 291 ---------KDGALWFAASKIDKSLKDEVLIRANGIPTYFAADIAYHRNKFEKRGFDIVI 341 Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 + G+DH G+V R++A A+ ++ V+L +LVRL R ++MSKR G ITL + Sbjct: 342 DIWGADHHGHVARMKAAMKALGIDPEKLIVILMQLVRLVRGKEVVRMSKRTGKAITLIDL 401 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 +DE+G D+ RFM + ++ D V +Q+ +NPVFYVQYA+AR I R + Sbjct: 402 IDEIGKDAARFMFNTKSADTHIEIDLDLVTQQTLDNPVFYVQYAHARTCGIIRALSEEGI 461 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 LD ++ QE E + + L + IE A + ++ YL DLAS+FH Sbjct: 462 VLDKSKIKVELLQQEEELELLKKLLELP-----EEIEMAARNLDVSRVTKYLLDLASMFH 516 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ R V+ N +L RL LV V +IN+ L ++GV++P +M Sbjct: 517 AFYNACR-------VKNENEELMFTRLSLVECVRIVINNMLRLLGVDAPEKM 561 >gi|300705360|ref|YP_003746963.1| arginyl-tRNA synthetase [Ralstonia solanacearum CFBP2957] gi|299073024|emb|CBJ44381.1| Arginyl-tRNA synthetase [Ralstonia solanacearum CFBP2957] Length = 600 Score = 523 bits (1348), Expect = e-146, Method: Composition-based stats. Identities = 196/621 (31%), Positives = 300/621 (48%), Gaps = 69/621 (11%) Query: 8 SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 + L + + E IV+ERP+ AHG ++ N A+ L++PLG +P +A Sbjct: 6 KQTISQLLSDAVGTLLPEGTNRPEIVLERPKQAAHGDIACNVALQLAKPLGTNPRELANR 65 Query: 68 IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 I I+ D V +V IAG GFINL LSP+ +L+++ G YG + G V Sbjct: 66 IADGIRADARGQRLVSAVEIAGPGFINLRLSPTARADVLAAVFAEGDRYGAADLHDGAPV 125 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EFVSANPTGP+HVGH R A +GD LA+L+ + G++V RE+Y NDAG QI+ LA+SV Sbjct: 126 LVEFVSANPTGPLHVGHGRQAALGDALAALLEWQGHKVHREFYYNDAGVQIHNLAVSVQA 185 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPIVKDYS 237 R + L ++ PE Y G Y+ + + + + + + ++ ++ Sbjct: 186 RAR-GLKPGEAGWPEAAYNGDYIADIAADYLAGKTVRASDGEPVTGACDVENIEAIRRFA 244 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 V + DL+A ++ D + E + +R +D L G YE Sbjct: 245 VTYLRNEQDIDLQAFGVKFDHYYLESSLYA--DGKVRQTVDALIAAGKTYE--------- 293 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 L R+T GDD DR + KSDGSYTYF D+AY K+ RGF +I V G Sbjct: 294 -------QDGALWLRTTDDGDDKDRVMRKSDGSYTYFVPDVAYHTTKWGRGFTQVINVQG 346 Query: 358 SDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 SDH G + R+ A + K + +L ++V + +DG +K+SKRAG ++T+R +++ Sbjct: 347 SDHHGTIARVRAGLQGLDIGIPKGYPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIE 406 Query: 416 E------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 G D+VRF +L RK FD +Q Sbjct: 407 WSNGDAESEAGVDTIRACVESGAPSWPERFTRGRDAVRFFLLSRKADTEFVFDVDLALKQ 466 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES-EFDTSELQLIVHLAE 504 S ENPV+YVQYA+AR S+F Q L ++ + + L+ LA Sbjct: 467 SDENPVYYVQYAHARICSVFEQWHAREGGDVASLAGADLAAVAGPDASPQAVALVQRLAA 526 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 +P ++ +A P+ +AFYL DLA FH ++ R V ++ + RL L+ Sbjct: 527 FPDMLADAARELAPHAVAFYLRDLAGDFHAFYNADR-------VLVDDDAVKRARLALLA 579 Query: 565 AVASIINSGLNIIGVESPNEM 585 A ++ +GL +IGV +P +M Sbjct: 580 ATRQVLRNGLAVIGVSAPQKM 600 >gi|206890670|ref|YP_002248471.1| arginyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742608|gb|ACI21665.1| arginyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 538 Score = 523 bits (1348), Expect = e-146, Method: Composition-based stats. Identities = 215/585 (36%), Positives = 328/585 (56%), Gaps = 47/585 (8%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M+ F +R+ +K + + IE P++ A G LST AM +++ L Sbjct: 1 MHKF--LKNRIIETIKILGLPEVEPE-------IEIPKNEAFGDLSTPIAMEIAKKLKKP 51 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P TIA+ I+ I +SV +AG GFIN ++ L +++ G + IG G Sbjct: 52 PRTIAQDIIQSINKS-SFESVELAGPGFINFKFKNDFVFSELENLLKLGELFFTQNIGNG 110 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 K+ IEFVSANPTGP+H+GH R A +G LA+++ +GY V EYYINDAG Q+ L LS Sbjct: 111 KKIQIEFVSANPTGPLHLGHGRGAALGAALANILKEAGYNVFTEYYINDAGKQVEILGLS 170 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V+ Q L+ + ++PE Y G Y+ + KEL D Y + L N ++ + D+S + Sbjct: 171 VYI-ALQNLFGKNLEMPEECYKGEYINEIAKELYDLYGNSLQNKEFDEIADFLIDFSYKK 229 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 M+ I+ DL + D +ISE + ++ I L G++YE Sbjct: 230 MLNEIKKDLDDFGVNFDNWISERKLYH--TGEVQRAILKLKELGFIYE------------ 275 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 L F ST GDD DR ++KSDG+YTYFA+D+AY K K ERGFD +I + G+DH Sbjct: 276 ----KDGALWFHSTAFGDDKDRVIVKSDGTYTYFASDIAYHKNKIERGFDELINIWGADH 331 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY++R++A A+ +QI +LL ++V L R+G P++MSKRAG F+TLR ++DE+G+D Sbjct: 332 HGYIQRVKAAVQALGMSDSQIKILLVQMVNLLREGKPVQMSKRAGTFVTLRELIDEIGAD 391 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 + +F+ L R++ L+FD K+QS ENPV+YVQYA+AR SIF +A+ +LF Sbjct: 392 TTKFIFLTRRHDSHLEFDIEIAKKQSHENPVYYVQYAHARINSIFVKAQSEPERFSGELF 451 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 + EL++I YP + E + +EP+++ FYL +LA++FH ++ R Sbjct: 452 -----------NEDELRIIKKALIYPMIFELSVQMREPHRITFYLQELAALFHSYYHKYR 500 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V + N +LT RL L A+ ++ GL ++GV++P +M Sbjct: 501 -------VISENDELTETRLSLCKAIMFVLKHGLRMLGVKAPEKM 538 >gi|83748526|ref|ZP_00945547.1| Arginyl-tRNA synthetase [Ralstonia solanacearum UW551] gi|207742125|ref|YP_002258517.1| arginyl-trna synthetase (arginine--trna ligase) (argrs) protein [Ralstonia solanacearum IPO1609] gi|83724830|gb|EAP71987.1| Arginyl-tRNA synthetase [Ralstonia solanacearum UW551] gi|206593513|emb|CAQ60440.1| arginyl-trna synthetase (arginine--trna ligase) (argrs) protein [Ralstonia solanacearum IPO1609] Length = 598 Score = 523 bits (1347), Expect = e-146, Method: Composition-based stats. Identities = 197/619 (31%), Positives = 300/619 (48%), Gaps = 67/619 (10%) Query: 8 SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 + L + + E IV+ERP+ AHG ++ N A+ L++PLG +P +A Sbjct: 6 KQTISQLLSDAVGTLLPEGTNRPEIVLERPKQAAHGDIACNVALQLAKPLGTNPRELANR 65 Query: 68 IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 I I+ D V +V IAG GFINL LSP+ +L+++ G YG + G V Sbjct: 66 IADGIRADARGQRLVSAVEIAGPGFINLRLSPTARADVLAAVFAEGDRYGAADLHDGAPV 125 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EFVSANPTGP+HVGH R A +GD LA+L+ + G++V RE+Y NDAG QI+ LA+SV Sbjct: 126 LVEFVSANPTGPLHVGHGRQAALGDALAALLEWQGHKVHREFYYNDAGVQIHNLAVSVQA 185 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPIVKDYS 237 R + L ++ PE Y G Y+ + + + + + L ++ ++ Sbjct: 186 RAR-GLKPGEAGWPEAAYNGDYIADIAADYLAGKTVRASDGEPVTGARDVENLEAIRRFA 244 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 V + DL+A ++ D + E + +R +D L G YE Sbjct: 245 VTYLRNEQDIDLQAFGVKFDHYYLESSLYA--DGKVRQTVDALIAAGKTYE--------- 293 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 L R+T GDD DR + KSDGSYTYF D+AY K+ RGF +I V G Sbjct: 294 -------QDGALWLRTTDDGDDKDRVMRKSDGSYTYFVPDVAYHTTKWGRGFTQVINVQG 346 Query: 358 SDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 SDH G + R+ A + K + +L ++V + +DG +K+SKRAG ++T+R +++ Sbjct: 347 SDHHGTIARVRAGLQGLDIGIPKGYPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIE 406 Query: 416 E----------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSK 447 G D+VRF +L RK FD +QS Sbjct: 407 WSNGDAEAGVDTIRACVESGAPSWPERFTRGRDAVRFFLLSRKADTEFVFDVDLALKQSD 466 Query: 448 ENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES-EFDTSELQLIVHLAEYP 506 ENPV+YVQYA+AR S+F Q L ++ + + L+ LA +P Sbjct: 467 ENPVYYVQYAHARICSVFEQWHAREGGDVASLAGADLAAVAGPDASPQAVALVQRLAAFP 526 Query: 507 RVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAV 566 ++ +A P+ +AFYL DLA FH ++ R V ++ + RL L+ A Sbjct: 527 DMLADAARELAPHAVAFYLRDLAGDFHAFYNADR-------VLVDDDAVKRARLALLAAT 579 Query: 567 ASIINSGLNIIGVESPNEM 585 ++ +GL +IGV +P +M Sbjct: 580 RQVLRNGLAVIGVSAPQKM 598 >gi|295675302|ref|YP_003603826.1| arginyl-tRNA synthetase [Burkholderia sp. CCGE1002] gi|295435145|gb|ADG14315.1| arginyl-tRNA synthetase [Burkholderia sp. CCGE1002] Length = 596 Score = 523 bits (1347), Expect = e-146, Method: Composition-based stats. Identities = 186/615 (30%), Positives = 300/615 (48%), Gaps = 63/615 (10%) Query: 7 FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 + L + +K++ + + + I +ERP+ AHG ++ N AM L++PL +P Sbjct: 9 LETLLADTVKQVATATQGATEAAFVSPAIALERPKVAAHGDVACNVAMQLAKPLRANPRQ 68 Query: 64 IAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +A+ IV + ++P +D+ +AG GFINL L+ + + +++++ YGR+ Sbjct: 69 LAQQIVEALLVNPQAKGLIDTAEVAGPGFINLRLTAAAKQGVIAAVFAEKEAYGRSRRDA 128 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G V IEFVSANPTGP+HVGH R A +GD LA ++ G++V RE+Y NDAG QI+TLAL Sbjct: 129 GKHVLIEFVSANPTGPLHVGHGRQAALGDALAHVLESQGWDVHREFYYNDAGVQIHTLAL 188 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233 S R + L D P Y G Y+ + K+ + + + L + Sbjct: 189 STQARAR-GLAPGDEGWPASAYNGEYIADIAKDYLNGITVEASDGEPVTGARDVEDLEAI 247 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 + ++V + + DL+A ++ D + E + + +D L G YE Sbjct: 248 RRFAVTYLRREQDMDLQAFGVKFDQYYLESSLYT--EGRVEKTVDALIAAGKTYE----- 300 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353 L R+T GDD DR + K+DG+YTYF D+AY K+ERGF +I Sbjct: 301 -----------QEGALWLRTTDDGDDKDRVMRKTDGTYTYFVPDVAYHVAKWERGFTKVI 349 Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 V GSDH G + R+ A + K + +L ++V + R+G +K+SKRAG ++T+R Sbjct: 350 NVQGSDHHGTIARVRAGLQGLGIGIPKGYPDYILHKMVTVMRNGEEVKISKRAGSYVTVR 409 Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 +++ G D+VRF ++ RK FD +Q+ ENP Sbjct: 410 DLIEWSGGATPGSEAAVDLIDEETIRRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V YVQYA+AR S+ + D + + L+ LAE+P +++ Sbjct: 470 VHYVQYAHARICSVI---AECNARYGLDESVLPSVDLAPLASERSMALLNKLAEFPDMLQ 526 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A P+ +AFYL +LA FH ++ E V ++ R+ L+ A ++ Sbjct: 527 HAADELAPHAVAFYLRELAGEFHSFYNDRAER-----VLVDDAAERNARVALLAATRQVL 581 Query: 571 NSGLNIIGVESPNEM 585 +GL IGV +P +M Sbjct: 582 ANGLATIGVSAPVKM 596 >gi|299068188|emb|CBJ39407.1| Arginyl-tRNA synthetase [Ralstonia solanacearum CMR15] Length = 600 Score = 523 bits (1347), Expect = e-146, Method: Composition-based stats. Identities = 196/621 (31%), Positives = 299/621 (48%), Gaps = 69/621 (11%) Query: 8 SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 + L + + E IV+ERP+ AHG ++ N A+ L++PLG +P +A Sbjct: 6 KQTISQLLSDAVGTLLPEGTNRPEIVLERPKQAAHGDIACNVALQLAKPLGTNPRELANR 65 Query: 68 IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 I I+ D V +V IAG GFINL LSP+ +L+++ G YG + G V Sbjct: 66 IADGIRADARGQRLVSAVEIAGPGFINLRLSPTARTDVLTAVFAEGDRYGAADLHDGAPV 125 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EFVSANPTGP+HVGH R A +GD LA+L+ + G++V RE+Y NDAG QI+ LA+SV Sbjct: 126 LVEFVSANPTGPLHVGHGRQAALGDALAALLEWQGHKVHREFYYNDAGVQIHNLAVSVQA 185 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPIVKDYS 237 R + D+ PE Y G Y+ + + + + + + ++ ++ Sbjct: 186 RAR-GFKPGDAGWPEAAYNGDYIADIAADYLAGKTVRASDGEPVTGARDVENMEAIRRFA 244 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 V + DL+A ++ D + E + ++ +D L G YE Sbjct: 245 VTYLRNEQDIDLQAFGVKFDHYYLESSLYA--DGKVQQTVDALIAAGKTYE--------- 293 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 L R+T GDD DR + KSDGSYTYF D+AY K+ RGF +I V G Sbjct: 294 -------QEGALWLRTTDDGDDKDRVMRKSDGSYTYFVPDVAYHTTKWGRGFTQVINVQG 346 Query: 358 SDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 SDH G + R+ A + K + +L ++V + +DG +K+SKRAG ++T+R +++ Sbjct: 347 SDHHGTIARVRAGLQGLDIGIPKGYPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIE 406 Query: 416 E------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 G D+VRF +L RK FD +Q Sbjct: 407 WSNGDVESEAGVDTIRACVDSGAPNWPGRFTRGRDAVRFFLLSRKADTEFVFDVDLALKQ 466 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES-EFDTSELQLIVHLAE 504 S ENPV+YVQYA+AR S+F Q L ++ E + L+ +A Sbjct: 467 SDENPVYYVQYAHARICSVFEQWHAREGGDAASLAGADLAAVAGPEASPQAVALVQRIAA 526 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 +P V+ +A P+ +AFYL DLA FH ++ R V ++ + RL L+ Sbjct: 527 FPDVLADAARELAPHAVAFYLRDLAGDFHAFYNADR-------VLVDDDAVKRARLALLA 579 Query: 565 AVASIINSGLNIIGVESPNEM 585 A ++ +GL +IGV +P +M Sbjct: 580 ATRQVLRNGLAVIGVSAPQKM 600 >gi|209518210|ref|ZP_03267037.1| arginyl-tRNA synthetase [Burkholderia sp. H160] gi|209501325|gb|EEA01354.1| arginyl-tRNA synthetase [Burkholderia sp. H160] Length = 596 Score = 523 bits (1347), Expect = e-146, Method: Composition-based stats. Identities = 190/615 (30%), Positives = 304/615 (49%), Gaps = 63/615 (10%) Query: 7 FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 + L +K++ + + + I +ERP+ AHG ++ N AM L++PL +P Sbjct: 9 LETLLAETVKQVATATQGATEAAFVSPAIALERPKVAAHGDVACNVAMQLAKPLRANPRQ 68 Query: 64 IAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +A+ IV + P +D+ +AG GFINL L+ + + ++++++ YGR+ Sbjct: 69 LAQQIVDTLLAHPQAKGLIDTAEVAGPGFINLRLTAAAKQGVIAAVLAEKDAYGRSQRDA 128 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G V IEFVSANPTGP+HVGH R A +GD LA ++ G++V RE+Y NDAG QI+TLAL Sbjct: 129 GKHVLIEFVSANPTGPLHVGHGRQAALGDALAHVLGSQGWDVHREFYYNDAGVQIHTLAL 188 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233 S R + L D P Y G Y+ + K+ + + + L + Sbjct: 189 STQARAR-GLAPGDEGWPASAYNGEYIADIAKDYLNGVTVEASDGEPVTGARDVEDLEAI 247 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 + ++V + + DL+A ++ D + E + + +D L G YE Sbjct: 248 RRFAVTYLRREQDMDLQAFGVKFDQYYLESSLYT--EGRVEKTVDALIAAGKTYE----- 300 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353 L R+T GDD DR + K+DG+YTYF D+AY K+ERGF +I Sbjct: 301 -----------QEGALWLRTTDDGDDKDRVMRKTDGTYTYFVPDVAYHVAKWERGFTKVI 349 Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 V GSDH G + R+ A + K + +L ++V + R+G +K+SKRAG ++T+R Sbjct: 350 NVQGSDHHGTIARVRAGLQGLGIGIPKGYPDYILHKMVTVMRNGEEVKISKRAGSYVTVR 409 Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 +++ G D+VRF ++ RK FD +Q+ ENP Sbjct: 410 DLIEWSGGATPGSEAAVDLIDEETIRRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V YVQYA+AR S+ + + + L +V P SE + L+ LAE+P +++ Sbjct: 470 VHYVQYAHARICSVIAECNTRYGFEESTLASVDVAPLTSE---RAMALLNKLAEFPDMLQ 526 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A P+ +AFYL +LA FH ++ E V ++ R+ L+ A ++ Sbjct: 527 HAADELAPHAVAFYLRELAGEFHSFYNDRAER-----VLVDDAAERNARVALLAATRQVL 581 Query: 571 NSGLNIIGVESPNEM 585 +GL IGV +P +M Sbjct: 582 ANGLATIGVSAPVKM 596 >gi|317131750|ref|YP_004091064.1| arginyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3] gi|315469729|gb|ADU26333.1| arginyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3] Length = 564 Score = 523 bits (1347), Expect = e-146, Method: Composition-based stats. Identities = 190/586 (32%), Positives = 308/586 (52%), Gaps = 36/586 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 + + + + K+ + L +E P D AHG S N AM+ +R L + P I Sbjct: 10 DEIRHVVMQAMGRLVASGKLPAEPLPPFGVEVPADRAHGDFSANVAMVSARALKMPPRKI 69 Query: 65 AELIVARIKIDPDVDS-VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 AE ++ + + + +AG GF+N +L+P++ IL+++ G Y G G K+ Sbjct: 70 AEAVLGELCLKGTYFTHAEVAGPGFLNFFLAPAWYTAILNAVQTEGEGYTHTAQGGGKKI 129 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +E+VSANPTGPMH+G+ R +GD LA+++ +GY+VTRE+Y+NDAG QI A+S+ Sbjct: 130 MVEYVSANPTGPMHMGNARGGALGDCLAAVLEHAGYDVTREFYVNDAGNQIAKFAVSLEA 189 Query: 184 RYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 RY Q D+ PE Y G ++ KE A +Y + L+ PE++ ++ + ++ + Sbjct: 190 RYFQIFRGEDAVPFPEDGYHGDDVRERAKEFAAQYGKQYLDAPEDERRKVLAAFGIERNV 249 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 K + DDL I++D++ E H + + D+I L +G YE Sbjct: 250 KKLHDDLLKYRIEYDVWFRESVLH--EDGELADVIALLKERGAAYE-------------- 293 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHS 361 L + +T G + D L++++G TYFAAD+AY + K+E RGF ++ V G+DH Sbjct: 294 --KDGALWYAATRFGAEKDEVLVRANGIPTYFAADIAYHRNKFEKRGFAKVVDVWGADHH 351 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 G+V RL+ A+ +++V+L +LVRL R G ++MSKR G I+L +++EV D+ Sbjct: 352 GHVARLKGAMDAIGVGGDKLDVVLTQLVRLMRGGEVVRMSKRTGKAISLDDLLEEVPVDA 411 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 RF R+ + LDFD EQS +NPV+YVQYA+AR SI + ++ P Sbjct: 412 ARFFFNLREANSHLDFDLDLAVEQSSQNPVYYVQYAHARIWSILKNLAAE------NIHP 465 Query: 482 RNVIPQE--SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 R P+E + E +LI HL P I+ A A +P ++ Y+ DLA+ FH ++ Sbjct: 466 RACTPEEFGLLSASEERELIRHLGLLPNEIDEAAKAYDPARITRYVLDLATKFHKFYNAH 525 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V+ + L RL L V ++ L+++ + +P M Sbjct: 526 Y-------VRGEDEPLMQARLNLCLCVRDVLKYVLDMLKITAPQTM 564 >gi|163854373|ref|YP_001628671.1| arginyl-tRNA synthetase [Bordetella petrii DSM 12804] gi|229558756|sp|A9HVX4|SYR_BORPD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|163258101|emb|CAP40400.1| argS [Bordetella petrii] Length = 561 Score = 522 bits (1346), Expect = e-146, Method: Composition-based stats. Identities = 181/569 (31%), Positives = 290/569 (50%), Gaps = 48/569 (8%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKID----PDVDSVFIAGK 86 ++++ERP+ AHG ++TN AM L++P +P +A+ IV + + V++ IAG Sbjct: 27 QVLLERPKVAAHGDVATNIAMQLAKPARRNPRELAQGIVDALMAETAARALVENAEIAGP 86 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GFIN ++ + + ++ ++ G YG G KV +EFVSANPTGP+HVGH R A + Sbjct: 87 GFINFRITAAARQAVIQAVAEQGEAYGHAPAT-GEKVLVEFVSANPTGPLHVGHARQAAL 145 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYL 206 GD + L A +G +VTRE+Y NDAG QI LA+SV R + + + D P Y G Y+ Sbjct: 146 GDAICRLYAATGRDVTREFYYNDAGNQIQNLAVSVQARAR-GIAPDSPDYPADGYKGDYI 204 Query: 207 KHVGKE------LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 + ++ L + + + L ++ ++V + + DL+A + D + Sbjct: 205 VDIAQDFIARKTLQAADGAAVTASGDVDNLDDIRVFAVAYLRREQDLDLQAFGLAFDNYY 264 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVG--D 318 E + + + L +G+ YE L R+T +G D Sbjct: 265 LESSLYT--SGRVEQTVQALVAKGHTYE----------------QDGALWLRTTELGTGD 306 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAV--SE 376 D DR + KS+G YTYF D+AY K K+ERGF + + + GSDH G V R+ A A+ Sbjct: 307 DKDRVMRKSEGGYTYFVPDVAYHKAKWERGFRHAVNIQGSDHHGTVARVRAGLQALEEGI 366 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 K +L ++V++ R G +K+SKRAG ++TLR ++D VG D+VR+ ++ R+ Sbjct: 367 PKDYPAYVLHKMVKVMRGGEEVKISKRAGSYVTLRDLIDWVGRDAVRYFLIQRRADTEFV 426 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD +S ENPV+Y+QYA+AR S+ A D +E Sbjct: 427 FDIDLALSKSDENPVYYIQYAHARICSMIANAG-------ADDARIAQADTALLTAPTEF 479 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 L+ LA +P+++ A P+ +AF+L D AS FH ++ R V ++ L Sbjct: 480 ALMQRLASFPQIVAQAAQELAPHHIAFWLRDCASDFHAWYNAER-------VLVDDEPLK 532 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL+L ++ +GL ++GV +P M Sbjct: 533 LARLRLAATTRQVLANGLALLGVSAPQRM 561 >gi|325124126|gb|ADY83649.1| arginyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2] Length = 596 Score = 522 bits (1346), Expect = e-146, Method: Composition-based stats. Identities = 190/629 (30%), Positives = 314/629 (49%), Gaps = 77/629 (12%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L + ++ + + + + + R +D +HG ++N AMI S+ G+ Sbjct: 1 MN--TAIQAALDHAVQTLQQEGVLPSDWKNTSNLTRTKDRSHGDFASNIAMIGSKAAGMK 58 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE ++A + D+ IAG GFIN +L+ IL I +GR+ Sbjct: 59 PRDLAEKVLAALPEVADISKAEIAGPGFINFFLNADQRFAILDQIQAQKEIFGRSQANAA 118 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 K+ +EFVSANPT +HVGH R A G T+A+L+ +G +V REYY+NDAG Q++ LA S Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVANLLEATGAKVDREYYVNDAGRQMDILATS 178 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS--------------ELLNFPE 226 + RY + L N P+ Y G Y+K + + + DK E + + E Sbjct: 179 TYLRYLELLGQNLV-FPKNAYQGDYVKEIAQGIIDKDGDAYVREVANVYKDVPEDVQYAE 237 Query: 227 E------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 E + ++ A++ I+DDL + Sbjct: 238 ELDSEGNKVVLSGDKEKHIDGLIANSQQLLGDGYRVFHQAALHAILDDIKDDLADFGVTF 297 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 + + SE + I + ++ L ++G++YE + F+ST Sbjct: 298 NQWFSEASL----SAKIDEALETLDQRGFLYE----------------KDGNIWFKSTEF 337 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GD+ DR + + +G TYFA+D+AY K +RG+ ++I + GSDH GY+ R++A A+ Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDLIDIWGSDHHGYISRVKAAIDAMGY 397 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 ++ VLL + V L+R G ++MS R+G F+TLR + EVG+D+ RF + RK+ + +D Sbjct: 398 DSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD QSK+N V+Y+QYA+AR + +A + DL FD+ D +E Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARICRMLEKA--VSTDLQFDVNTARPHAARLSLD-AET 514 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 ++I LA YP + A A EP+++ YL +LA++FHG ++ + V +++ +LT Sbjct: 515 EIIAKLAAYPDAVLRAANAYEPHQVGNYLKELAALFHGWYNEHK-------VLSDDAELT 567 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L V ++ +GL ++GV +P M Sbjct: 568 QARLLLSINVQQVLRNGLELLGVSAPESM 596 >gi|91790322|ref|YP_551274.1| arginyl-tRNA synthetase [Polaromonas sp. JS666] gi|122967265|sp|Q123B6|SYR_POLSJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|91699547|gb|ABE46376.1| arginyl-tRNA synthetase [Polaromonas sp. JS666] Length = 561 Score = 522 bits (1346), Expect = e-146, Method: Composition-based stats. Identities = 183/591 (30%), Positives = 294/591 (49%), Gaps = 43/591 (7%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 L + L + + + + V E P+ AHG ++ AAM L++PL L+P +A Sbjct: 3 QIKQDLLDALGQALKTMAPDSGVAA--VFESPKVAAHGDFASTAAMQLAKPLKLNPRQVA 60 Query: 66 ELIVARIKIDP----DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 E + + P VD++ IAG GF+N+ L P ++++ ++ +YG L Sbjct: 61 ENLRGLLLQAPAFARWVDAIEIAGPGFLNIRLKPEAKQQVVREVLQGADQYGMQLADSPH 120 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 ++ +EFVSANPTGP+HVGH R A +GD + +L G++V RE+Y NDAG QI TLA S Sbjct: 121 RMVVEFVSANPTGPLHVGHGRQAALGDAICNLFDTQGWDVWREFYYNDAGVQIQTLATST 180 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK-----YSSELLNFPEEKWLPIVKDY 236 R + L D+ PE Y G Y+ + + K E + + + ++ + Sbjct: 181 QAR-AKGLKPGDAGWPEPAYNGDYIADIANDFLAKKTVKSDDREFTASGDVEDIDAIRQF 239 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 +V + DL+A +++ D + E + + + L G YE Sbjct: 240 AVAYLRHEQDLDLRAFSVRFDNYYLESSLY--SSGRVDSAVQKLKDAGKTYE-------- 289 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVM 356 L +ST GDD DR + K DGSYTYF D+AY K+ERGF I + Sbjct: 290 --------QDGALWLKSTDYGDDKDRVMKKGDGSYTYFVPDVAYHLAKWERGFSKAINIQ 341 Query: 357 GSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414 G DH G + R+ A A + + +L +VR+ R G +K+SKRAG ++TLR ++ Sbjct: 342 GMDHHGTIARVRAGLQAASAGIPQGYPDYVLHTMVRVVRHGEEVKISKRAGSYVTLRDLI 401 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 + +D+VRF +L RK FD ++ ENPV+YVQYA+AR SI + Sbjct: 402 EWTSADAVRFFLLSRKPDTEYVFDIDLALAKNNENPVYYVQYAHARICSIL----GTWAA 457 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 D + + L++ LA+YP ++ NA P+ +AFYL +LA+ +H Sbjct: 458 QGGDASQLKSVDLSALDGPQAQALMLLLAKYPDMLSNAAAGLAPHDVAFYLRELAACYHS 517 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ R + ++ + + RL LV A A ++++GL ++GV +P++M Sbjct: 518 YYDAER-------ILVDDEAIKLARLALVAATAQVLHNGLKVLGVSAPHKM 561 >gi|302872432|ref|YP_003841068.1| arginyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47] gi|302575291|gb|ADL43082.1| arginyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47] Length = 561 Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats. Identities = 197/592 (33%), Positives = 318/592 (53%), Gaps = 38/592 (6%) Query: 1 MYLFA----DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRP 56 M L S ++N +K E + I+IE+P++ +HG +TN A+ L++ Sbjct: 1 MNLVKLAKEQVKSVIQNAIKRCIETGIFELDSIPDIMIEKPKEKSHGDFATNIALELTKK 60 Query: 57 LGLDPLTIAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115 L +P IA+ I+ I + + V +AG GFIN + +L K + I+ G YG+ Sbjct: 61 LRKNPREIAQHILNCIDLSETFIERVEVAGPGFINFFFKKEWLYKAVEVILSEGNNYGKV 120 Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175 IG G KV +EFVSANPTGPMH+G+ R +GD LA+L+ ++GY VT+E+Y+NDAG QI Sbjct: 121 NIGNGKKVMVEFVSANPTGPMHMGNARGGALGDCLANLLKWAGYNVTKEFYVNDAGNQIE 180 Query: 176 TLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD 235 S+ RY+Q L + DLPE Y G + KE D++ +L N ++ + D Sbjct: 181 KFGQSLEIRYRQ-LKGENIDLPEDCYHGEDIIERVKEYLDEHGDDLENLSSDERRKKLVD 239 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 ++++ + ++++ L+ I++D++ E + + + + I++L +GY YE Sbjct: 240 FALKRNILLMKEHLRKYGIEYDVWFHESSLY--ESGEVFETIEDLKSRGYTYE------- 290 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDD-VDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMI 353 L F ++ + D L++++G TYFAAD+AY + K+E RGFD +I Sbjct: 291 ---------KDGALWFVASKIDKSLKDEVLIRANGIPTYFAADIAYHRNKFEKRGFDIVI 341 Query: 354 YVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 + G+DH G+V R++A A+ ++ V+L +LVRL R ++MSKR G ITL + Sbjct: 342 DIWGADHHGHVARMKAAMKALGIDPERLIVILMQLVRLVRGKEVVRMSKRTGKAITLIDL 401 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 +DE+G D+ RFM + ++ D V +Q+ +NPVFYVQYA+AR I R + Sbjct: 402 IDEIGKDAARFMFNTKSADTHIEIDLDLVTQQTLDNPVFYVQYAHARTCGIIRALSEEGI 461 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 LD ++ QE E + + L + IE A + ++ YL DLAS+FH Sbjct: 462 VLDKSKIKVELLQQEEELELLKKLLELP-----EEIEIAAKNLDVSRVTKYLLDLASMFH 516 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ R V+ N +L RL LV V +IN+ L ++GV++P +M Sbjct: 517 AFYNACR-------VKNENEELMFTRLSLVECVRIVINNMLRLLGVDAPEKM 561 >gi|260551329|ref|ZP_05825530.1| arginyl-tRNA synthetase [Acinetobacter sp. RUH2624] gi|260405643|gb|EEW99134.1| arginyl-tRNA synthetase [Acinetobacter sp. RUH2624] Length = 596 Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats. Identities = 184/629 (29%), Positives = 311/629 (49%), Gaps = 77/629 (12%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L + ++ + + + + + R +D +HG ++N AMI S+ G+ Sbjct: 1 MN--TAIQAALDHAVQTLQQEGVLPSDWNNSSNLTRTKDRSHGDFASNIAMIGSKAAGMK 58 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE I+A + D+ IAG GFIN +L+ IL I +GR+ Sbjct: 59 PRDLAEKILAALPEVADISKAEIAGPGFINFFLNADQRFAILDQIQAQKESFGRSQSNAA 118 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 K+ +EFVSANPT +HVGH R A G T+A+L+ +G +V REYY+NDAG Q++ LA S Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVANLLEATGAKVDREYYVNDAGRQMDILATS 178 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY--------SSELLNFPEE----- 227 + RY + L N P+ Y G Y+K + + + DK + + PE+ Sbjct: 179 TYLRYLELLGQNLV-FPKNAYQGDYVKEIAQSIIDKDNNAYVRDVADVYKDVPEDVQYAE 237 Query: 228 -------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 + + ++ A++ I+DDL + Sbjct: 238 ELDSEGNKVVLSGDKEKHIDGLIANSQQLLGEGYRVFHQAALHAILDDIKDDLADFGVTF 297 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 + + SE + I + ++ L ++G++YE + F+ST Sbjct: 298 NQWFSEASL----SAKIDEALETLDQRGFLYE----------------KDGNIWFKSTEF 337 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GD+ DR + + +G TYFA+D+AY K +RG+ +++ + GSDH GY+ R++A A+ Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDLVDIWGSDHHGYISRVKAAIDAMGY 397 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 ++ VLL + V L+R G ++MS R+G F+TLR + EVG+D+ RF + RK+ + +D Sbjct: 398 DSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD QSK+N V+Y+QYA+AR + +A + + +E Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARICRMLEKATSTGLQFEVSAARSHAA---RLSLDAET 514 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +++ LA YP V+ A A EP+++ YL +LA++FHG ++ + V +++ +LT Sbjct: 515 EILAKLAAYPDVVLRAANAYEPHQVGNYLKELAALFHGWYNEHK-------VLSDDAELT 567 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L V ++ +GL ++GV +P M Sbjct: 568 QARLLLSINVQQVLRNGLELLGVSAPEAM 596 >gi|241765029|ref|ZP_04763024.1| arginyl-tRNA synthetase [Acidovorax delafieldii 2AN] gi|241365387|gb|EER60186.1| arginyl-tRNA synthetase [Acidovorax delafieldii 2AN] Length = 561 Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats. Identities = 179/574 (31%), Positives = 287/574 (50%), Gaps = 41/574 (7%) Query: 23 KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVD--- 79 K+ + E P+ +HG + AAM L++PL L+P +AE + + P Sbjct: 18 KLSPGAGAKAAFESPKVASHGDFACTAAMQLAKPLKLNPRQVAENLRTALLATPVYQRWV 77 Query: 80 -SVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138 + IAG GFIN+ L P+ ++I+ ++ +G +G + +V +EFVSANPTGP+HV Sbjct: 78 TEIEIAGPGFINIRLKPAAKQEIVREVLGAGARFGYR-PRRNARVLVEFVSANPTGPLHV 136 Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198 GH R A +GD ++ L G++V RE+Y NDAG QI TLA S R + D++ PE Sbjct: 137 GHGRQAALGDAISHLFDTQGWDVYREFYYNDAGVQIATLATSTQMRAR-GFKPGDAEWPE 195 Query: 199 GYYPGVYLKHVGKELADK-----YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN 253 Y G Y+ + + K E + L ++ ++V + DLKA + Sbjct: 196 AAYNGDYIADIAADFLAKKTVRSDDREFTASGDVNDLDGMRLFAVAYLRHEQDLDLKAFD 255 Query: 254 IQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRS 313 ++ D + E + + ++ L G YE L +S Sbjct: 256 VRFDNYYLESSLYT--SGKVDAVVQKLRDAGKTYEH----------------DGALWLKS 297 Query: 314 TMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA 373 T GDD DR + K DG YTYF D+AY K+ERGF ++ + G+DH G + R+ A A Sbjct: 298 TEYGDDKDRVMRKGDGGYTYFVPDVAYHITKWERGFTKVVNIQGTDHHGTIARVRAGLQA 357 Query: 374 --VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431 V + + +L +VR+ R G +K+SKRAG ++TLR +++ D+VRF +L RK Sbjct: 358 AGVGIPQGYPDYVLHTMVRVVRGGEEVKISKRAGSYVTLRDLIEWTSKDAVRFFLLSRKP 417 Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491 FD Q+ +NPV+YVQYA+AR S+ R ++ D+ + + Sbjct: 418 DTEYTFDVDLAVAQNNDNPVYYVQYAHARICSVLRSWQEQGGG---DVAALKDVDLSALE 474 Query: 492 DTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQAN 551 L++ LA+YP ++ A + P+ + FYL DLA+ +H ++ R + Sbjct: 475 GPQAQALMLQLAKYPDMLTAAAEGEAPHDVTFYLRDLAASYHSYYDAER-------ILVE 527 Query: 552 NRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + RL LV A A ++++GL ++GV +P M Sbjct: 528 DESVKLARLALVAATAQVLHNGLAVLGVSAPARM 561 >gi|207727725|ref|YP_002256119.1| arginyl-trna synthetase (arginine--trna ligase) (argrs) protein [Ralstonia solanacearum MolK2] gi|206590966|emb|CAQ56578.1| arginyl-trna synthetase (arginine--trna ligase) (argrs) protein [Ralstonia solanacearum MolK2] Length = 600 Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats. Identities = 197/621 (31%), Positives = 300/621 (48%), Gaps = 69/621 (11%) Query: 8 SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 + L + + E IV+ERP+ AHG ++ N A+ L++PLG +P +A Sbjct: 6 KQTISQLLSDAVGTLLPEGTNRPEIVLERPKQAAHGDIACNVALQLAKPLGTNPRELANR 65 Query: 68 IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 I I+ D V +V IAG GFINL LSP+ +L+++ G YG + G V Sbjct: 66 IADGIRADARGQRLVSAVEIAGPGFINLRLSPTARADVLAAVFAEGDRYGAADLHDGAPV 125 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EFVSANPTGP+HVGH R A +GD LA+L+ + G++V RE+Y NDAG QI+ LA+SV Sbjct: 126 LVEFVSANPTGPLHVGHGRQAALGDALAALLEWQGHKVHREFYYNDAGVQIHNLAVSVQA 185 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPIVKDYS 237 R + L ++ PE Y G Y+ + + + + + L ++ ++ Sbjct: 186 RAR-GLKPGEAGWPEAAYNGDYIADIAADYLAGKTVRASDGEPVTGARDVENLEAIRRFA 244 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 V + DL+A ++ D + E + +R +D L G YE Sbjct: 245 VTYLRNEQDIDLQAFGVKFDHYYLESSLYA--DGKVRQTVDALIAAGKTYE--------- 293 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 L R+T GDD DR + KSDGSYTYF D+AY K+ RGF +I V G Sbjct: 294 -------QDGALWLRTTDDGDDKDRVMRKSDGSYTYFVPDVAYHTTKWGRGFTQVINVQG 346 Query: 358 SDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 SDH G + R+ A + K + +L ++V + +DG +K+SKRAG ++T+R +++ Sbjct: 347 SDHHGTIARVRAGLQGLDIGIPKGYPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIE 406 Query: 416 E------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 G D+VRF +L RK FD +Q Sbjct: 407 WSNGDAEAEAGVDTIRACVESGAPSWPERFTRGRDAVRFFLLSRKADTEFVFDVDLALKQ 466 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES-EFDTSELQLIVHLAE 504 S ENPV+YVQYA+AR S+F Q L ++ + + L+ LA Sbjct: 467 SDENPVYYVQYAHARICSVFEQWHAREGGDVASLAGADLTAVAGPDASPQAVALVQRLAA 526 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 +P ++ +A P+ +AFYL DLA FH ++ R V ++ + RL L+ Sbjct: 527 FPDMLADAARELAPHAVAFYLRDLAGDFHAFYNADR-------VLVDDDAVKRARLALLA 579 Query: 565 AVASIINSGLNIIGVESPNEM 585 A ++ +GL +IGV +P +M Sbjct: 580 ATRQVLRNGLAVIGVSAPQKM 600 >gi|269957251|ref|YP_003327040.1| arginyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894] gi|269305932|gb|ACZ31482.1| arginyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894] Length = 566 Score = 522 bits (1344), Expect = e-146, Method: Composition-based stats. Identities = 185/570 (32%), Positives = 286/570 (50%), Gaps = 39/570 (6%) Query: 25 EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIA 84 + + +ERPR HG +TN A+ L++ G +P +AE++ +R+ + V IA Sbjct: 27 PAAVPASVHVERPRQREHGDWATNVALQLAKKAGTNPRALAEVLASRLASVSGIKQVDIA 86 Query: 85 GKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCA 144 G GF+N+ L + ++ SIV +G YG N G +N+EFVSANPTGP+H+G R A Sbjct: 87 GPGFLNITLDAAAAGELARSIVETGATYGHNQAEAGKHINLEFVSANPTGPLHIGGVRWA 146 Query: 145 VVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGV 204 VGD+LA ++ SG +VTREYY ND GAQI+ A S+ + PE Y G Sbjct: 147 AVGDSLARVLEASGAQVTREYYFNDHGAQIDRFARSLLAAAR------GEAAPEDGYGGS 200 Query: 205 YLKHVGKELADKY----SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFI 260 Y++ + + + P+ + + VQ M ++ L + D+F Sbjct: 201 YIREIADAVTAQALAAGEPAPATLPDGEAQEAFRARGVQMMFAEVKTSLHDFGVDFDVFF 260 Query: 261 SEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 ED H + + + L G+++E R+T GDD Sbjct: 261 HEDSLH--ESGAVERAVARLRELGHIFEA----------------DGATWLRTTDFGDDK 302 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKA- 379 DR ++K DG Y A D+AY+ K ERG D IY++G+DH GYV R+ A+ AA + Sbjct: 303 DRVVIKRDGEAAYIAGDIAYYLDKRERGADEAIYMLGADHHGYVGRMMAICAAFGDTPGV 362 Query: 380 QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDF 439 + +L+ +LV L +DG P++MSKRAG+ IT+ +VD VG D+ R+ + +D D Sbjct: 363 TMQILIGQLVNLVKDGEPVRMSKRAGNIITIDDLVDAVGVDAARYSLARFAADSTIDLDL 422 Query: 440 CKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI 499 + Q ENPV+YVQYA++R ++ R A + D F +++ +E L+ Sbjct: 423 DLLTSQKNENPVYYVQYAHSRTAAVDRNAAERGV-ARADGFEPSLLDH-----PTEAVLL 476 Query: 500 VHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV----QANNRKL 555 LAE+PRV+ A +EP+++A YL LA +H + + R V Sbjct: 477 GRLAEFPRVVGEAAALREPHRVARYLEALAGDYHSWYQAKDADGAQRRVLPYPDEPVTDT 536 Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L AV ++ +GL ++GV +P M Sbjct: 537 HRTRLWLNDAVRQVLANGLGLLGVSAPERM 566 >gi|262380742|ref|ZP_06073895.1| arginyl-tRNA synthetase [Acinetobacter radioresistens SH164] gi|262297690|gb|EEY85606.1| arginyl-tRNA synthetase [Acinetobacter radioresistens SH164] Length = 596 Score = 522 bits (1344), Expect = e-146, Method: Composition-based stats. Identities = 184/629 (29%), Positives = 311/629 (49%), Gaps = 77/629 (12%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L + ++ + + + + + + R +D +HG ++N AMI ++ G+ Sbjct: 1 MN--TAIQAALDHAVQSLQNQRVLPTEWTNSSSLTRTKDRSHGDFASNIAMIGAKAAGMK 58 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE I+A + D+ IAG GFIN +L+ +L I +YGR + Sbjct: 59 PRDLAEKILANLPEVADISKAEIAGPGFINFFLNADQRFAVLDQIQAQKDQYGRTQVNAA 118 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 K+ +EFVSANPT +HVGH R A G T+A+L+ +G +V REYY+NDAG Q++ LA S Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVATLLEATGAKVDREYYVNDAGRQMDILATS 178 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF--------PEE----- 227 + RY + L D P+ Y G Y+K + + + D ++ PE+ Sbjct: 179 TYLRYLELL-GQDLVFPKNAYQGDYVKEIAQGIIDLKGKTYVHLVADVYKDVPEDVQYAA 237 Query: 228 -------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 + + +++A++ I+DDL + Sbjct: 238 EPDSEGNKVVLSGDKEKHIDGLIFNAQHLLGEGYRVFHQAALKAILDDIKDDLGEFGVTF 297 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 + + SE I + + L ++G++YE + F+ST Sbjct: 298 NEWFSEASL----TEKIDEALQTLGQRGFLYE----------------KDGNIWFKSTEF 337 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GD+ DR + + +G TYFA+D+AY K +RG+ ++I + GSDH GY+ R++A A+ Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDLIDIWGSDHHGYISRVKAAIEAMGY 397 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 ++ VLL + V L+R G ++MS R+G F+TLR + EVG+D+ RF + RK+ + +D Sbjct: 398 DSKKLTVLLVQFVSLWRSGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD QSK+N V+Y+QYA+AR + +A L+ + E +E Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARICRMLEKAASNGIVLNVSTARSHAPRLEL---DAET 514 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ LA YP ++ A EP+++ YL +LA++FHG ++ + V ++ +LT Sbjct: 515 ELLAKLAAYPDIVIRAANVYEPHQVGNYLKELAALFHGWYNEHK-------VLGDDAELT 567 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L V ++ +GL ++GV +P M Sbjct: 568 QARLLLSVNVQQVLRNGLELLGVSAPTTM 596 >gi|307728283|ref|YP_003905507.1| arginyl-tRNA synthetase [Burkholderia sp. CCGE1003] gi|307582818|gb|ADN56216.1| arginyl-tRNA synthetase [Burkholderia sp. CCGE1003] Length = 600 Score = 522 bits (1344), Expect = e-146, Method: Composition-based stats. Identities = 187/616 (30%), Positives = 304/616 (49%), Gaps = 61/616 (9%) Query: 7 FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 + L + +K++ + + + I +ERP+ AHG ++ N AM L++PL +P Sbjct: 9 LETLLADTVKQVALATQGATEAAFVSPTIALERPKVAAHGDVACNVAMQLAKPLRANPRQ 68 Query: 64 IAELIVARI----KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +A+ IV + + ++S +AG GFINL L+ + + ++++++ YGR+ Sbjct: 69 LAQQIVDTLLAQPQAQGLIESAEVAGPGFINLRLAAAAKQAVVAAVLAEKDAYGRSQRDA 128 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G V IEFVSANPTGP+HVGH R A +GD L++++A G++V RE+Y NDAG QI TLAL Sbjct: 129 GKHVLIEFVSANPTGPLHVGHGRQAALGDALSNVLASQGWDVHREFYYNDAGVQIGTLAL 188 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233 S R + L D+ P Y G Y+ + K+ + + + L + Sbjct: 189 STQARAR-GLAPGDAGWPASAYNGEYIADIAKDYLNGVTVCASDGEPVTGARDVENLDAI 247 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 + ++V + + DL+A ++ D + E + + ++ L G YE Sbjct: 248 RRFAVAYLRREQDMDLQAFGVKFDQYYLESSLYT--EGRVEKTVEALIAAGKTYE----- 300 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353 L R+T GDD DR + KSDG+YTYF D+AY K+ERGF +I Sbjct: 301 -----------QEGALWLRTTDDGDDKDRVMRKSDGTYTYFVPDVAYHVAKWERGFTKVI 349 Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 + GSDH G + R+ A + K + +L ++V + R+G +K+SKRAG ++T+R Sbjct: 350 NIQGSDHHGTIARVRAGLQGLGIGIPKGYPDYILHKMVTVMRNGEEVKISKRAGSYVTVR 409 Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 +++ G D+VRF ++ RK FD +Q+ ENP Sbjct: 410 DLIEWSGGATPGSEAAVDLIDEETIRRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469 Query: 451 VFYVQYAYARCRSIFRQAKD-IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 V YVQYA+AR S+ + K D D + + L+ LAE+P ++ Sbjct: 470 VHYVQYAHARICSVIAECKSRYGADYGADESALANVDLAPLSSERAMALLNKLAEFPDML 529 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 ++A P+ +AFYL DLA FH ++ E V ++ R+ L+ A + Sbjct: 530 QHAADELAPHAVAFYLRDLAGEFHSFYNDKAER-----VLVDDAAERNARVALLAATRQV 584 Query: 570 INSGLNIIGVESPNEM 585 + +GL +IGV +P +M Sbjct: 585 LANGLAVIGVSAPVKM 600 >gi|121606589|ref|YP_983918.1| arginyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2] gi|166232820|sp|A1VTL9|SYR_POLNA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|120595558|gb|ABM38997.1| arginyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2] Length = 558 Score = 521 bits (1343), Expect = e-145, Method: Composition-based stats. Identities = 189/597 (31%), Positives = 299/597 (50%), Gaps = 52/597 (8%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 + + D S L L+++ D+ E P+ AHG + AAM L++PL + Sbjct: 2 LSIKKDLLSALAIALEQLSPGAG------DKAAFESPKVAAHGDFACTAAMQLAKPLKQN 55 Query: 61 PLTIAELIVARIKIDP----DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116 P AE + AR+ + P V+++ IAG GFIN+ L P+ ++ + ++ +G +YG Sbjct: 56 PRQTAESLRARLLLAPAFERWVEAIEIAGPGFINIRLKPAAKQETVREVLQAGAQYGTQP 115 Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176 K+ +EFVSANPTGP+HVGH R A +GD + +L A G +V RE+Y NDAG QI+T Sbjct: 116 TDHERKMIVEFVSANPTGPLHVGHGRQAALGDAICNLHATQGLDVWREFYYNDAGVQIHT 175 Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK-----YSSELLNFPEEKWLP 231 LA S R + L D++ PE Y G Y+ + ++ K E + + + Sbjct: 176 LATSTQAR-AKGLKPGDANWPEPAYNGDYIDDIARDFLAKKTVKSDDREFTASGDVEDME 234 Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291 ++ ++V + DLKA +++ D + E + + + L G YE Sbjct: 235 AIRQFAVAYLRHEQDLDLKAFSVKFDNYYLESSLY--SSGRVESTVQRLKDAGKTYE--- 289 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351 L RST GDD DR + KSDG++TYF D+AY K+ERGF Sbjct: 290 -------------QDGALWLRSTDYGDDKDRVMKKSDGTFTYFVPDVAYHLAKWERGFTK 336 Query: 352 MIYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFIT 409 + + G DH G + R+ A A + +L +VR+ R G +K+SKRAG ++T Sbjct: 337 AVNIQGMDHHGTIARVRAGLQAANAGIPAGYPDYVLHTMVRVVRHGEEVKISKRAGSYVT 396 Query: 410 LRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF-RQA 468 LR +++ +D+VRF +L RK FD ++ ENPV+YVQYA+AR SI Sbjct: 397 LRDLIEWTSADAVRFFLLSRKPDTEYIFDIDLALAKNNENPVYYVQYAHARICSILTAWG 456 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 D DL P L++ LA+Y ++ +A P+ +AFYL +L Sbjct: 457 GDESQFGHVDLSPLA--------SPQAQALMLLLAKYTDMLSHAAAGFAPHDVAFYLREL 508 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A+ +H ++ R + ++ + + RL LV A A ++++GL ++GV +P +M Sbjct: 509 AACYHSYYDAER-------ILVDDEAVKLARLALVAATAQVLHNGLAVLGVSAPRKM 558 >gi|68171671|ref|ZP_00545032.1| Arginyl-tRNA synthetase, class Ic [Ehrlichia chaffeensis str. Sapulpa] gi|67998906|gb|EAM85597.1| Arginyl-tRNA synthetase, class Ic [Ehrlichia chaffeensis str. Sapulpa] Length = 576 Score = 521 bits (1343), Expect = e-145, Method: Composition-based stats. Identities = 245/587 (41%), Positives = 354/587 (60%), Gaps = 14/587 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCK--IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58 M L + + L + K I ++ IL +++++ P + HG L TNAA+ILS + Sbjct: 1 MNLINTVKNCIVEKLHILSDKKLIVLDDVILSKLIVDYPNNHNHGDLYTNAALILSSHIK 60 Query: 59 LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 PL IAE++++ + S+ + GFIN +S ++++SI + + IG Sbjct: 61 KSPLEIAEILLSEFSNIKGISSINVVKPGFINFSISLYVWYEVVASINMLKEGFANVNIG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G KVN+EFVSANPTGPMH+GH R A+ GD LA+L+ GY+V REYYINDAG QI+ L Sbjct: 121 NGQKVNVEFVSANPTGPMHIGHARGAIFGDVLANLLEKVGYQVVREYYINDAGTQIDVLV 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 SV+ RY++A D + G YPG+YL+ +GK L +KY ++LL + + I++D S+ Sbjct: 181 ESVYLRYKEA-TGQDIVIGSGLYPGLYLREIGKLLYEKYGTDLLEMSFVRKMKIIRDVSL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + +M +I++DL L I+HD+F SE + + + + + L + +Y G+L PK Sbjct: 240 EYLMNLIKEDLALLGIEHDVFTSEAELLKNNI--VEKCVKLLEDKQLIYYGVLEQPKGTE 297 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 Q R Q+LF+ST GDDVDR L K DGS+TYFA D+AY K RGF +MI +GS Sbjct: 298 MQNWK-PRTQMLFKSTDFGDDVDRALQKVDGSWTYFANDIAYHFDKISRGFQHMILELGS 356 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GYVKRL+A A+S A +++ L V DG+ +KMSKR+G+F+T+R V+++VG Sbjct: 357 DHIGYVKRLKAAVKALSNNNATVDIKLHNTVNFLDDGVQVKMSKRSGEFLTIRDVIEKVG 416 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D VRFMML RK+ +LDFDF KV EQSK NP+FYVQYA+AR S+ R A +I D D Sbjct: 417 KDVVRFMMLTRKSDVVLDFDFAKVVEQSKNNPIFYVQYAHARVCSLMRNAPNILGIEDTD 476 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + E+ LI LA++P V+E + EP+++ FYL ++A FH W + Sbjct: 477 FSVLS--------SKEEILLIKLLAKWPNVVEMSAKTAEPHRITFYLIEVAEAFHVLWGY 528 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G +N RF+ N+ LT R+ L +VA II+SGL I + EM Sbjct: 529 GNKNANRRFIIDNDVNLTSARIYLAKSVAYIISSGLKIFSIVPLEEM 575 >gi|256833012|ref|YP_003161739.1| arginyl-tRNA synthetase [Jonesia denitrificans DSM 20603] gi|256686543|gb|ACV09436.1| arginyl-tRNA synthetase [Jonesia denitrificans DSM 20603] Length = 558 Score = 521 bits (1343), Expect = e-145, Method: Composition-based stats. Identities = 187/588 (31%), Positives = 292/588 (49%), Gaps = 40/588 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 + S+ L L + + + D I +ERPR HG +TN A+ L++ G P Sbjct: 4 DELSTALHTALSDAVSAGAITLASSDVPDMIHVERPRQRDHGDWATNVALQLAKKAGQPP 63 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +A+ + AR++ + V +AG GF+N+ L + ++ +IV +G EYGR+ + G Sbjct: 64 RVLADALAARLQEQAGIARVDVAGPGFLNITLDTAAAGELARTIVEAGGEYGRSAVRAGR 123 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 +N+EFVSANPTGP+H+G R A VGD+LA ++ +G V +EYY ND GAQI+ A S+ Sbjct: 124 TINLEFVSANPTGPIHIGGTRWAAVGDSLARILQATGAHVVKEYYFNDHGAQIDRFARSL 183 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHV---GKELADKYSSELLNFPEEKWLPIVKDYSV 238 Q +PE Y G Y+ + LA ++L + V Sbjct: 184 VASAQGL------PVPEDGYGGQYIHDIAQQVLALAAAEGIDVLGLDPADTQEFFRARGV 237 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + M I+ L + D++ E+ + + + I L G+++E Sbjct: 238 ELMFGQIKQSLHDFGVDFDVYFHENHLY--ESGEVDKAIAKLRDNGHIFE---------- 285 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 R+T GDD DR ++KSDG Y A D+AY+ K ERG D ++ ++G+ Sbjct: 286 ------QDGATWLRTTTFGDDKDRVVIKSDGDAAYIAGDIAYYLNKRERGSDEVVIMLGA 339 Query: 359 DHSGYVKRLEAVAAAVSE-KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 DH GY+ RL AV AA + + VL+ ++V L +DG P++MSKRAG +TL +VD V Sbjct: 340 DHHGYIGRLMAVCAAFGDTPHTNLEVLIGQMVNLVKDGEPLRMSKRAGTVVTLEDLVDIV 399 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G D+ R+ + + +D D + + S +NPVFYVQYA+AR ++ R A D Sbjct: 400 GVDAARYALARSSVDQSIDIDLDVLAKASNDNPVFYVQYAHARTANVARNAAAAGVHRDD 459 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 P + +E +LI L EYPR++E A +E +++A Y LA +H +S Sbjct: 460 AFDPA------TLSHPTETELIGRLTEYPRIVEQAAQLREQHRVARYAEALAGAYHKWYS 513 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R P A RL L A ++ + L+++GV +P M Sbjct: 514 ECRVTPLS---GAEVTDTHRTRLWLNDATGQVLRNALSLLGVSAPERM 558 >gi|332875617|ref|ZP_08443429.1| arginine--tRNA ligase [Acinetobacter baumannii 6014059] gi|332736190|gb|EGJ67205.1| arginine--tRNA ligase [Acinetobacter baumannii 6014059] Length = 596 Score = 521 bits (1343), Expect = e-145, Method: Composition-based stats. Identities = 185/629 (29%), Positives = 312/629 (49%), Gaps = 77/629 (12%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L + ++ + + + + + R +D +HG ++N AMI S+ G+ Sbjct: 1 MN--TAIQAALDHAVQTLQQEGVLPSDWNNSSNLTRTKDRSHGDFASNIAMIGSKAAGMK 58 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE I+A + D++ IAG GFIN +L+ IL I +GR+ Sbjct: 59 PRDLAEKILAVLPEVADINKAEIAGPGFINFFLNADQRFAILDQIQAQKESFGRSQSNAA 118 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 K+ +EFVSANPT +HVGH R A G T+A+L+ +G +V REYY+NDAG Q++ LA S Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVANLLEATGAKVDREYYVNDAGRQMDILATS 178 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS--------------ELLNFPE 226 + RY + L N P+ Y G Y+K + + + DK E + + E Sbjct: 179 TYLRYLELLGQNLV-FPKNAYQGDYVKEIAQGIIDKDGDAYVREVANVYKDVPEDVQYAE 237 Query: 227 E------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 E + + ++ A++ I+DDL + Sbjct: 238 ELDSEGNKVVLSGDKEKHIDGLIANSQQLLGEGYRVFHQAALHAILDDIKDDLADFGVTF 297 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 + + SE + I + ++ L ++G++YE + F+ST Sbjct: 298 NQWFSEASL----SAKIDEALETLDQRGFLYE----------------KDGNIWFKSTEF 337 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GD+ DR + + +G TYFA+D+AY K +RG+ +++ + GSDH GY+ R++A A+ Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDLVDIWGSDHHGYISRVKAAIDAMGY 397 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 ++ VLL + V L+R G ++MS R+G F+TLR + EVG+D+ RF + RK+ + +D Sbjct: 398 DSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD QSK+N V+Y+QYA+AR + +A + + +E Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARICRMLEKAASTGLQFEVSAARSHAA---RLSLDAET 514 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +++ LA YP V+ A A EP+++ YL +LA++FHG ++ + V +++ +LT Sbjct: 515 EILAKLAAYPDVVLRAANAYEPHQVGNYLKELAALFHGWYNEHK-------VLSDDAELT 567 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L V ++ +GL ++GV +P M Sbjct: 568 QARLLLSINVQQVLRNGLELLGVSAPEAM 596 >gi|71909477|ref|YP_287064.1| arginyl-tRNA synthetase [Dechloromonas aromatica RCB] gi|109894985|sp|Q478Y7|SYR_DECAR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|71849098|gb|AAZ48594.1| arginyl-tRNA synthetase [Dechloromonas aromatica RCB] Length = 587 Score = 521 bits (1343), Expect = e-145, Method: Composition-based stats. Identities = 197/621 (31%), Positives = 305/621 (49%), Gaps = 72/621 (11%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + D ++L L++ + I +ERPRD HG +TN AM L++ L +P Sbjct: 1 MAQDVKTQLTALLQQALASVAPAATDTP-IHLERPRDPTHGDFATNLAMQLAKALKKNPR 59 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 IA ++A + V +AG GFIN L + ++ +++ G +GR+ G K Sbjct: 60 EIANQLLAELPPSRLVTKAEVAGAGFINFTLDAGFKTDVVKAVLAEGDNFGRSNQGGWQK 119 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V +EFVSANPTGP+HVGH R A G +L+SL+ F+G++VTREYY+NDAG Q++ L LS + Sbjct: 120 VQVEFVSANPTGPLHVGHGRGAAYGASLSSLLTFAGWDVTREYYVNDAGRQMDILGLSTW 179 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN-----------FPEEKWLP 231 RY + + D Y G Y++ + K++ + + + PE + Sbjct: 180 LRYLEQ-HGVDVPFLPNAYQGDYVRDMAKQMTVAHGDKFVRPAADVLAGTPGLPEAERAD 238 Query: 232 ---------------------------IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDD 264 V +++ + RDDL+ + D++ SE Sbjct: 239 DEAKRQRDLHLDALIANAKVLLGPDWTYVHQHALSEQLADGRDDLEEFGVHFDVWFSEQA 298 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 D + +D L + G++Y + F+ST GD+ DR + Sbjct: 299 LF--DTGLVARCVDLLEKNGHLY----------------VQNGARWFKSTTFGDEKDRVV 340 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 + +G YTYFA+D+AY K+ERGFD +I + G+DH GY+ R+ A+ +++ V Sbjct: 341 QRENGLYTYFASDIAYHLNKFERGFDKVINIWGADHHGYIARVNGAITALGLDASKLQVA 400 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L + LYR+G MS R+G+F+TLR + EVG+D+ RF RK+ + LDFD K Sbjct: 401 LVQFAVLYRNGQKASMSTRSGEFVTLRELRGEVGNDACRFFYALRKSDQHLDFDLDLAKS 460 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 Q+ ENPV+Y+QYA+AR S+ Q DL + EL + LAE Sbjct: 461 QTNENPVYYIQYAHARVCSVINQWG-------GDLATLADANLALLDNPRELAIASKLAE 513 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 + VI+ A P+ +AFYL DLA FHG ++ R + ++ L R+ L Sbjct: 514 FRDVIDGAARELAPHLIAFYLKDLAGEFHGWYNAER-------MLVDDAALRDARVALAA 566 Query: 565 AVASIINSGLNIIGVESPNEM 585 AV I +G+ I+GV P+ M Sbjct: 567 AVRQTIRNGMTILGVSCPDSM 587 >gi|170691609|ref|ZP_02882774.1| arginyl-tRNA synthetase [Burkholderia graminis C4D1M] gi|170143814|gb|EDT11977.1| arginyl-tRNA synthetase [Burkholderia graminis C4D1M] Length = 596 Score = 521 bits (1343), Expect = e-145, Method: Composition-based stats. Identities = 189/615 (30%), Positives = 307/615 (49%), Gaps = 63/615 (10%) Query: 7 FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 + L + +K++ + + + I +ERP+ AHG ++ N AM L++PL +P Sbjct: 9 LETLLADTVKQVALATQGATEAAFVSPTIALERPKVAAHGDVACNVAMQLAKPLRANPRQ 68 Query: 64 IAELIVARI----KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +A+ IV + + ++S +AG GFINL L+ + + ++ +++ YGR+ Sbjct: 69 LAQQIVDTLLAQPQAQGLIESAEVAGPGFINLRLAAAAKQAVVKAVLAEKDVYGRSQRDA 128 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G V IEFVSANPTGP+HVGH R A +GD L++++A G++V RE+Y NDAG QI TLAL Sbjct: 129 GKHVLIEFVSANPTGPLHVGHGRQAALGDALSNVLASQGWDVHREFYYNDAGVQIGTLAL 188 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPIV 233 S R + L D+ P Y G Y+ + K+ + + + L + Sbjct: 189 STQARAR-GLAPGDAGWPASAYNGEYIADIAKDYLNGVTVSASDGEPVTGARDVENLDAI 247 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 + ++V + + DL+A ++ D + E + + + L G YE Sbjct: 248 RRFAVAYLRREQDMDLQAFGVKFDQYYLESSLYT--EGRVEKTVQALITAGKTYE----- 300 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353 L R+T GDD DR + K+DG+YTYF D+AY K+ERGF +I Sbjct: 301 -----------REGALWLRTTDDGDDKDRVMRKTDGTYTYFVPDVAYHVAKWERGFTKVI 349 Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 + GSDH G + R+ A + K + +L ++V + R+G +K+SKRAG ++T+R Sbjct: 350 NIQGSDHHGTIARVRAGLQGLGIGIPKGYPDYVLHKMVTVMRNGEEVKISKRAGSYVTVR 409 Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 +++ G D+VRF ++ RK FD +Q+ ENP Sbjct: 410 DLIEWSGGALPGTEAAVDQIDEETIRRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V YVQYA+AR S+ + K + + L ++ P SE + L+ LAE+P +++ Sbjct: 470 VHYVQYAHARICSVIAECKTRYGADESTLDSVDLAPLSSE---RSMALLNKLAEFPDMLQ 526 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A P+ +AFYL DLA FH ++ E V ++ R+ L+ A ++ Sbjct: 527 HAADELAPHAVAFYLRDLAGEFHSFYNDRAER-----VLVDDAAERNARVALLAATRQVL 581 Query: 571 NSGLNIIGVESPNEM 585 +GL IIGV +P +M Sbjct: 582 ANGLAIIGVSAPVKM 596 >gi|255320625|ref|ZP_05361802.1| arginyl-tRNA synthetase [Acinetobacter radioresistens SK82] gi|255302241|gb|EET81481.1| arginyl-tRNA synthetase [Acinetobacter radioresistens SK82] Length = 596 Score = 521 bits (1343), Expect = e-145, Method: Composition-based stats. Identities = 185/629 (29%), Positives = 310/629 (49%), Gaps = 77/629 (12%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L + ++ + + + + + R +D +HG ++N AMI ++ G+ Sbjct: 1 MN--TAIQAALDHAVQSLQNQGVFPTEWTNSSSLTRTKDRSHGDFASNIAMIGAKAAGMK 58 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE I+A + D+ IAG GFIN +L+ +L I +YGR + Sbjct: 59 PRDLAEKILANLPEVADISKAEIAGPGFINFFLNADQRFAVLDQIQAQKDQYGRTQVNAA 118 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 K+ +EFVSANPT +HVGH R A G T+A+L+ +G +V REYY+NDAG Q++ LA S Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVATLLEATGAKVDREYYVNDAGRQMDILATS 178 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL--------NFPEE----- 227 + RY + L D P+ Y G Y+K + + + D + + PE+ Sbjct: 179 TYLRYLELL-GQDLVFPKNAYQGDYVKEIAQGIIDLKGEAYVHPVADVYKDVPEDVQYAA 237 Query: 228 -------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 + + +++A++ I+DDL + Sbjct: 238 EPDSEGNKVVLSGDKEKHIDGLIFNAQHLLGEGYRVFHQAALKAILDDIKDDLGEFGVTF 297 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 + + SE I + + L ++G++YE + F+ST Sbjct: 298 NEWFSEASL----TEKIDEALQTLDQRGFLYE----------------KDGNIWFKSTEF 337 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GD+ DR + + +G TYFA+D+AY K +RG+ ++I + GSDH GY+ R++A A+ Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDLIDIWGSDHHGYISRVKAAIEAMGY 397 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 ++ VLL + V L+R G ++MS R+G F+TLR + EVG+D+ RF + RK+ + +D Sbjct: 398 DSKKLTVLLVQFVSLWRSGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD QSK+N V+Y+QYA+AR + +A L+ + E +E Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARICRMLEKAASNGIVLNVSTARSHAPRLEL---DAET 514 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +L+ LA YP ++ A EP+++ YL +LA++FHG ++ + V N+ +LT Sbjct: 515 ELLAKLAAYPDIVIRAANVYEPHQVGNYLKELAALFHGWYNEHK-------VLGNDAELT 567 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L V ++ +GL ++GV +P M Sbjct: 568 QARLLLSVNVQQVLRNGLELLGVSAPTTM 596 >gi|17545006|ref|NP_518408.1| arginyl-tRNA synthetase [Ralstonia solanacearum GMI1000] gi|39932229|sp|Q8Y2P8|SYR_RALSO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|17427296|emb|CAD13815.1| probable arginyl-trna synthetase (arginine--trna ligase) (argrs) protein [Ralstonia solanacearum GMI1000] Length = 600 Score = 521 bits (1342), Expect = e-145, Method: Composition-based stats. Identities = 195/621 (31%), Positives = 299/621 (48%), Gaps = 69/621 (11%) Query: 8 SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 + L + + E IV+ERP+ AHG ++ N A+ L++PLG +P +A Sbjct: 6 KQTISQLLSDAVGTLLPEGTNRPEIVLERPKQAAHGDIACNVALQLAKPLGTNPRELANR 65 Query: 68 IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 I I+ D V +V IAG GFINL LSP+ +L+++ G YG + G V Sbjct: 66 IADGIRADARGQRLVSAVEIAGPGFINLRLSPTARTDVLAAVFAEGDRYGAADLHDGAPV 125 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EFVSANPTGP+HVGH R A +GD LA+L+ + G++V RE+Y NDAG QI+ LA+SV Sbjct: 126 LVEFVSANPTGPLHVGHGRQAALGDALAALLEWQGHKVHREFYYNDAGVQIHNLAVSVQA 185 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPIVKDYS 237 R + D+ PE Y G Y+ + + + + + + ++ ++ Sbjct: 186 RAR-GFKPGDTGWPEAAYNGDYIADIAADYLAGKTVRASDGEPVTGARDVENIEAIRRFA 244 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 V + DL+A ++ D + E + ++ +D L G YE Sbjct: 245 VTYLRNEQDIDLQAFGVKFDHYYLESSLYA--DGKVQQTVDALIAAGKTYE--------- 293 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMG 357 L R+T GDD DR + KSDGSYTYF D+AY K+ RGF +I V G Sbjct: 294 -------QEGALWLRTTDDGDDKDRVMRKSDGSYTYFVPDVAYHTTKWGRGFTQVINVQG 346 Query: 358 SDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 SDH G + R+ A + K + +L ++V + +DG +K+SKRAG ++T+R +++ Sbjct: 347 SDHHGTIARVRAGLQGLDLGIPKGYPDYVLHKMVTVMKDGAEVKISKRAGSYVTVRDLIE 406 Query: 416 E------------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQ 445 G D+VRF +L RK FD +Q Sbjct: 407 WSNGDAESEAGVDTIRACVESGAPNWPGRFTRGRDAVRFFLLSRKADTEFVFDVDLALKQ 466 Query: 446 SKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQES-EFDTSELQLIVHLAE 504 S ENPV+YVQYA+AR S+F Q L ++ E + L+ +A Sbjct: 467 SDENPVYYVQYAHARICSVFEQWHAREGGDAASLAGADLAAVAGPEASPQAVALVQRIAA 526 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVH 564 +P ++ +A P+ +AFYL DLA FH ++ R V ++ + RL L+ Sbjct: 527 FPDMLADAARELAPHAVAFYLRDLAGDFHAFYNADR-------VLVDDDAVKRARLALLA 579 Query: 565 AVASIINSGLNIIGVESPNEM 585 A ++ +GL +IGV +P +M Sbjct: 580 ATRQVLRNGLAVIGVSAPQKM 600 >gi|299771958|ref|YP_003733984.1| arginyl-tRNA synthetase [Acinetobacter sp. DR1] gi|298702046|gb|ADI92611.1| arginyl-tRNA synthetase [Acinetobacter sp. DR1] Length = 596 Score = 521 bits (1342), Expect = e-145, Method: Composition-based stats. Identities = 186/629 (29%), Positives = 311/629 (49%), Gaps = 77/629 (12%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L + ++ + + + + + R +D +HG ++N AMI S+ G+ Sbjct: 1 MN--TAIQAALDHAVQTLQQEGVLPSDWKNTSNLTRTKDRSHGDFASNIAMIGSKAAGMK 58 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE ++A + D+ IAG GFIN +L+ IL I +GR+ Sbjct: 59 PRDLAEKVLAALPEVTDISKAEIAGPGFINFFLNADQRFAILDQIQAQKEIFGRSQANAA 118 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 K+ +EFVSANPT +HVGH R A G T+A+L+ +G +V REYY+NDAG Q++ LA S Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVATLLEATGAKVDREYYVNDAGRQMDILATS 178 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS--------------ELLNFPE 226 + RY + L N P+ Y G Y+K + + + DK E + + E Sbjct: 179 TYLRYLELLGQNLV-FPKNAYQGDYVKEIAQTIIDKDGDAYLREVADVYKDVPEDVQYAE 237 Query: 227 E------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 E + + ++ A++ I+DDL + Sbjct: 238 ELDSDGNKVVLSGDKEKHIDGLIANSQQLLGEGYRVFHQAALHAILDDIKDDLADFGVTF 297 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 + + SE + I + ++ L ++G++YE + F+ST Sbjct: 298 NQWFSEASL----SAKIDEALETLDQRGFLYE----------------KDGNIWFKSTEF 337 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GD+ DR + + +G TYFA+D+AY K +RG+ ++I + GSDH GY+ R++A A+ Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDLIDIWGSDHHGYISRVKAAIDAMGY 397 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 ++ VLL + V L+R G ++MS R+G F+TLR + EVG+D+ RF + RK+ + +D Sbjct: 398 DSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD QSK+N V+Y+QYA+AR + +A D + + +E Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARICRMLEKAASTNLPFDVNTARPHAA---RLSLDAET 514 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +++ LA YP + A A EP++L YL +LA++FHG ++ + V +++ +LT Sbjct: 515 EILAKLAAYPDAVLRAANAYEPHQLGNYLKELAALFHGWYNEHK-------VLSDDAELT 567 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L V ++ +GL ++GV +P M Sbjct: 568 QARLLLSINVQQVLRNGLELLGVSAPESM 596 >gi|332286305|ref|YP_004418216.1| arginyl-tRNA synthetase [Pusillimonas sp. T7-7] gi|330430258|gb|AEC21592.1| arginyl-tRNA synthetase [Pusillimonas sp. T7-7] Length = 561 Score = 521 bits (1342), Expect = e-145, Method: Composition-based stats. Identities = 183/577 (31%), Positives = 295/577 (51%), Gaps = 48/577 (8%) Query: 23 KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPD----V 78 K+ + +++ERP+ AHG ++ N AM L++P +P +A+ IV + +P + Sbjct: 19 KIVPEATATVLLERPKVAAHGDIACNIAMQLAKPARRNPRELAQNIVDALLAEPATQALI 78 Query: 79 DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHV 138 S IAG GFIN L+ + +L +I G YG + K+ +EFVSANPTGP+HV Sbjct: 79 SSAEIAGPGFINFRLATAARHAVLDAIAQEGARYGHLSANQ-QKLMVEFVSANPTGPLHV 137 Query: 139 GHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPE 198 GH R A +GD++ L GY+VTRE+Y NDAG QI+ LA+SV R + + + SD P Sbjct: 138 GHSRQAALGDSICRLFTSQGYDVTREFYYNDAGNQIDNLAISVQARAR-GIEPDASDFPA 196 Query: 199 GYYPGVYLKHVGKELAD------KYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKAL 252 Y G Y+ + ++ + L ++ ++V + + DL+A Sbjct: 197 DGYKGDYIVDIARDFQAGATVTGTDGVSVTATGNIGSLDDIRVFAVAYLRREQDLDLQAF 256 Query: 253 NIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFR 312 ++ D + E + + + L G+ YE L R Sbjct: 257 GLKFDNYYLESSLYT--TGRVEQTVKALIDAGHTYEN----------------EGALWLR 298 Query: 313 STMVG--DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 +T +G DD DR + KS+G YTYF D+AY K+ERGF + I + G+DH G + R+ A Sbjct: 299 TTELGTGDDKDRVMRKSEGGYTYFVPDVAYHVAKWERGFHHAINIQGTDHHGTIARVRAG 358 Query: 371 AAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLW 428 + K +L ++V++ R+G +K+SKRAG ++T+R ++D VG D+VR+ + Sbjct: 359 LQGLNLGIPKDFPAYILHKMVKVVRNGAEVKISKRAGSYVTMRDLIDWVGQDAVRYFLSQ 418 Query: 429 RKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE 488 R+ FD +S+ENPV+Y+QYA+AR S+ Q+ ++ + P Sbjct: 419 RRADSEFVFDIDLALSKSEENPVYYIQYAHARICSMLTQSAELAAQVPQADVSLLTAPT- 477 Query: 489 SEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFV 548 E L+ L+EYP ++ AT P+ LAF+L D A+ FH ++ R V Sbjct: 478 ------EFALLQRLSEYPAMLALATQELAPHHLAFWLRDCAADFHAWYNAER-------V 524 Query: 549 QANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ +L + RL+L HA ++ +GL ++GV +P M Sbjct: 525 LVDDSQLKLARLRLAHATGQVVANGLELLGVSAPERM 561 >gi|296160343|ref|ZP_06843160.1| arginyl-tRNA synthetase [Burkholderia sp. Ch1-1] gi|295889324|gb|EFG69125.1| arginyl-tRNA synthetase [Burkholderia sp. Ch1-1] Length = 596 Score = 521 bits (1341), Expect = e-145, Method: Composition-based stats. Identities = 192/615 (31%), Positives = 308/615 (50%), Gaps = 63/615 (10%) Query: 7 FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 + L + +K++ + + + I +ERP+ AHG ++ N AM L++PL +P Sbjct: 9 LETLLADTVKQVALASQGATEAAFVSPTITLERPKVAAHGDVACNVAMQLAKPLRANPRQ 68 Query: 64 IAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +A+ IV + P V++ +AG GFINL L+ + + +++++ +GR+ Sbjct: 69 LAQQIVDALLAQPGARDLVEAAEVAGPGFINLRLTAAAKQAVIAAVFAEKERFGRSQRDA 128 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G V IEFVSANPTGP+HVGH R A +GD L++++A G++V RE+Y NDAG QI TLAL Sbjct: 129 GKHVLIEFVSANPTGPLHVGHGRQAALGDALSNVLASQGWDVHREFYYNDAGVQIQTLAL 188 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233 S R + L D P Y G Y+ + K+ A + + + L + Sbjct: 189 STQARAR-GLAPGDEGWPASAYNGEYIADIAKDYLNGVTVAASDGEPVTGARDVEDLEAI 247 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 + ++V + + DL+A ++ D + E ++ + + L G YE Sbjct: 248 RRFAVAYLRREQDMDLQAFGVKFDQYYLESSLYK--EGRVEKTVAALIAAGKTYE----- 300 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353 L R+T GDD DR + K+DG+YTYF D+AY K+ERGF +I Sbjct: 301 -----------QEGALWLRTTDDGDDKDRVMRKTDGTYTYFVPDVAYHVAKWERGFTKVI 349 Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 + GSDH G + R+ A + K + +L ++V + R+G +K+SKRAG ++T+R Sbjct: 350 NIQGSDHHGTIARVRAGLQGLGIGIPKGYPDYILHKMVTVMRNGEEVKISKRAGSYVTVR 409 Query: 412 HVVD---------EV------------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 +++ EV G D+VRF + RK FD +Q+ ENP Sbjct: 410 DLIEWSGGATPGSEVDVDLIDEETIRRGRDAVRFFLTSRKADTEFVFDIDLALKQNDENP 469 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V YVQYA+AR S+ + K + + L +V P SE + L+ LAE+P +++ Sbjct: 470 VHYVQYAHARICSVIAECKARYNTDESTLADVDVTPLTSE---RAMALLNKLAEFPDMLQ 526 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A P+ +AFYL DLA FH ++ E V ++ R+ L+ A ++ Sbjct: 527 HAADELAPHAVAFYLRDLAGEFHSFYNDKAER-----VLVDDAAERNARVALLAATRQVL 581 Query: 571 NSGLNIIGVESPNEM 585 +GL IGV +P +M Sbjct: 582 ANGLATIGVSAPVKM 596 >gi|88657836|ref|YP_507350.1| arginyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas] gi|109894990|sp|Q2GGT3|SYR_EHRCR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|88599293|gb|ABD44762.1| arginyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas] Length = 576 Score = 521 bits (1341), Expect = e-145, Method: Composition-based stats. Identities = 245/587 (41%), Positives = 355/587 (60%), Gaps = 14/587 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCK--IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58 M L + + L + K I ++ IL +++++ P + HG L TNAA+ILS + Sbjct: 1 MNLINTVKNCIVEKLHILSDKKLIVLDDVILSKLIVDYPNNHNHGDLYTNAALILSSHIK 60 Query: 59 LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 PL IAE++++ ++ S+ + GFIN +S ++++SI + + IG Sbjct: 61 KSPLEIAEILLSEFSNIKEISSINVVKPGFINFSISLYVWYEVVASINMLKEGFANVNIG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G KVN+EFVSANPTGPMH+GH R A+ GD LA+L+ GY+V REYYINDAG QI+ L Sbjct: 121 NGQKVNVEFVSANPTGPMHIGHARGAIFGDVLANLLEKVGYQVVREYYINDAGTQIDVLV 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 SV+ RY++A D + G YPG+YL+ +GK L +KY ++LL + + I++D S+ Sbjct: 181 ESVYLRYKEA-TGQDIVIGSGLYPGLYLREIGKLLYEKYGTDLLEMSFVRKMKIIRDVSL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + +M +I++DL L I+HD+F SE + + + + + L + +Y G+L PK Sbjct: 240 EYLMNLIKEDLALLGIEHDVFTSEAELLKNNI--VEKCVKLLEDKQLIYYGVLEQPKGTE 297 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 Q R Q+LF+ST GDDVDR L K DGS+TYFA D+AY K RGF +MI +GS Sbjct: 298 MQNWK-PRTQMLFKSTDFGDDVDRALQKVDGSWTYFANDIAYHFDKISRGFQHMILELGS 356 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GYVKRL+A A+S A +++ L V DG+ +KMSKR+G+F+T+R V+++VG Sbjct: 357 DHIGYVKRLKAAVKALSNNNATVDIKLHNTVNFLDDGVQVKMSKRSGEFLTIRDVIEKVG 416 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D VRFMML RK+ +LDFDF KV EQSK NP+FYVQYA+AR S+ R A +I D D Sbjct: 417 KDVVRFMMLTRKSDVVLDFDFAKVVEQSKNNPIFYVQYAHARVCSLMRNAPNILGIEDTD 476 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + E+ LI LA++P V+E + EP+++ FYL ++A FH W + Sbjct: 477 FSVLS--------SKEEILLIKLLAKWPNVVEMSAKTAEPHRITFYLIEVAEAFHVLWGY 528 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G +N RF+ N+ LT R+ L +VA II+SGL I + EM Sbjct: 529 GNKNANRRFIIDNDVNLTSARIYLAKSVAYIISSGLKIFSIVPLEEM 575 >gi|154501138|ref|ZP_02039176.1| hypothetical protein BACCAP_04827 [Bacteroides capillosus ATCC 29799] gi|150269830|gb|EDM97365.1| hypothetical protein BACCAP_04827 [Bacteroides capillosus ATCC 29799] Length = 582 Score = 521 bits (1341), Expect = e-145, Method: Composition-based stats. Identities = 179/587 (30%), Positives = 313/587 (53%), Gaps = 20/587 (3%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 +S + ++ + + + IE P+D +HG +++ AM ++ L + P I Sbjct: 10 DQVASLTQAAYEKAAAEGLLPAGAQVKATIEIPKDVSHGDYASSFAMAGAKALHMAPRAI 69 Query: 65 AELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 A++I+ ++++ S IAG GF+N L + ++++ I G+ YG G G KV Sbjct: 70 AQIILDHLELEGTYFQSAEIAGPGFLNFRLGSRWYGEVIADIEREGMTYGAVDEGHGEKV 129 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EFVSANPTGPMH+G+ R V+GD+LAS++ +GY+V RE+Y+NDAG QI+ ALS+ Sbjct: 130 MVEFVSANPTGPMHIGNARGGVLGDSLASVLERAGYDVWREFYVNDAGNQIHKFALSIDT 189 Query: 184 RYQQALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 RY+Q + ++ PE Y G +K + ++ ++ EE+ + ++ ++ + Sbjct: 190 RYRQLILGEENVPFPEDCYQGDDIKELAAAFRAEHGDSWVDKSEEERQEAMANFGLKRNI 249 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE--GILPPPKSKTTQ 300 +++DL+ I+++ + E H + + + + L+ +G+ YE G L ++ + Sbjct: 250 PKMQEDLRRYKIEYNEWFLESTLH--NSGYVAETVGMLSDKGWTYEKDGALWLNTTELLK 307 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSD 359 + M + + + D D L +++G YTYFAAD+AY + K E RGF I + G+D Sbjct: 308 EKYMREGKTREQVDKL-DLKDDVLRRANGFYTYFAADIAYHRNKLEKRGFQTAINIWGAD 366 Query: 360 HSGYVKRLEAVAAAVSEK-KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 H G+V RL+A + ++ V+L +LV L +DG P++MSKR+G I LR ++DEV Sbjct: 367 HHGHVARLQAALDGLGLDGSHRLVVVLMQLVNLLQDGKPVRMSKRSGKAIALRDLLDEVS 426 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D+ R+ R + LDFD ++ +NPV+YVQYA+AR S+ + K+ + Sbjct: 427 VDACRYFFNSRSFTSPLDFDLDLAVKEDSDNPVYYVQYAHARICSLVARMKEE----EAS 482 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + + I EL L+ L+ +P I A+ +P + YL LA FH ++ Sbjct: 483 VSAASAIDASVFSTPEELALVKTLSLFPEEIRLASRDYDPSHINRYLLTLAGDFHRFYNA 542 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R ++ + RL+L V S++ +G+ +IGV +P +M Sbjct: 543 CR-------IKGEEEHVLAARLKLADTVRSVLANGMALIGVTAPEKM 582 >gi|187479831|ref|YP_787856.1| arginyl-tRNA synthetase [Bordetella avium 197N] gi|109894974|sp|Q2KTN9|SYR_BORA1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|115424418|emb|CAJ50971.1| arginyl-tRNA synthetase [Bordetella avium 197N] Length = 561 Score = 520 bits (1340), Expect = e-145, Method: Composition-based stats. Identities = 189/592 (31%), Positives = 297/592 (50%), Gaps = 50/592 (8%) Query: 8 SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 L + L I E I++ERP+ AHG ++TN AM L++P +P +A+ Sbjct: 6 QQHLISLLARAVAGILPEAS--PDILLERPKVAAHGDVATNVAMQLAKPAKRNPRELAQG 63 Query: 68 IVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 IV + DP VDS IAG GFINL + + +++++ G +GR + KV Sbjct: 64 IVDALLADPQARAIVDSAEIAGPGFINLRFTAQARQAVVAAVSAQGAAFGR-AARRDEKV 122 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EFVSANPTGP+HVGH R A +GD + L SG++VTRE+Y NDAG QI LA+SV Sbjct: 123 LVEFVSANPTGPLHVGHARQAALGDAICRLFDASGWDVTREFYYNDAGNQIQNLAISVQA 182 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKW------LPIVKDYS 237 R + + + + P Y G Y+ + ++ + S + + + L ++ ++ Sbjct: 183 RAR-GIGPDAPEWPADGYKGDYIADIARDYLAQASVQAADGEPVQASGNIDDLEDIRAFA 241 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 V + + DL+A ++ D F E + + ++ L +G+ YE Sbjct: 242 VAYLRREQDLDLQAFGLKFDNFFLESSLYT--SGRVERTVETLIAKGHTYE--------- 290 Query: 298 TTQKCDMDRKQLLFRSTMVG--DDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 L R+T +G DD DR + KS+G YTYF D+AY K+ERGF + I + Sbjct: 291 -------QDGALWLRTTELGTGDDKDRVMRKSEGGYTYFVPDVAYHLAKWERGFHHAINI 343 Query: 356 MGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 GSDH G V R+ A + K +L ++V++ R G +K+SKRAG ++T+R + Sbjct: 344 QGSDHHGTVARVRAGLQGLEEGIPKEFPAYVLHKMVKVMRGGEEVKISKRAGSYVTMRDL 403 Query: 414 VDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFP 473 ++ VG D+VR+ ++ R+ FD +S ENPV+Y+QYA+AR S+ + Sbjct: 404 IEWVGRDAVRYFLIQRRADTEFVFDIDLALSKSDENPVYYIQYAHARICSMIASSG---- 459 Query: 474 DLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFH 533 D SE L+ LAE+P V++ A P+ +AF+L D AS FH Sbjct: 460 ---LDDATIAAADAARLTAPSEFALMQRLAEFPNVVKLAAQELAPHHIAFWLRDCASDFH 516 Query: 534 GHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G ++ R V ++ L RL+L ++ +GL ++GV + M Sbjct: 517 GWYNAER-------VLVDDEGLKQARLRLAATTRQVLANGLALLGVTALERM 561 >gi|109894984|sp|Q4JUI1|SYR_CORJK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS Length = 556 Score = 520 bits (1340), Expect = e-145, Method: Composition-based stats. Identities = 181/585 (30%), Positives = 292/585 (49%), Gaps = 36/585 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 A+ S + + ++ ++ +ERPR+ HG +TN AM +++ G +P Sbjct: 4 AELSELITETARTTLDAHGLDSSVVPESATVERPRNPEHGDYATNIAMQVAKKAGTNPRE 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 + + +D +AG GFIN+ L+ + KI+ I+ G +G G + Sbjct: 64 FGTWLAESLGAHEGIDEATVAGPGFINIRLAAAAQGKIVEDILTVGANFGHGDELAGAAI 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++ G +VTREYY ND GAQI+ A S+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLNARGAKVTREYYFNDHGAQIDRFARSLVA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y++ + ++ + + + ++ + + V+ M Sbjct: 184 AAK------GEPTPEDGYGGDYIQDIASQIV-EANPDWQKLGADEAQELFRSQGVELMFA 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L + D++ E+ + + I + G +YE Sbjct: 237 HIKRTLAEFGTEFDVYFHENSLF--ESGAVEAAIQKIKDNGNLYEA-------------- 280 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 RST GDD DR ++KSDG+ Y A D+AY K++RG + IY++G+DH GY Sbjct: 281 --DGAWWLRSTNFGDDKDRVVIKSDGNAAYIAGDIAYVADKFDRGHNLCIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL A AAA+ Q+ VL+ +LV L +DG ++MSKRAG ITL +V+ +G D+ R Sbjct: 339 IARLRAAAAAMGYDPQQVEVLIGQLVNLVKDGKAVRMSKRAGTVITLDDLVEAIGVDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + M+ LD D +S +NPVFYVQYA+AR S+ R+A+D+ + + + Sbjct: 399 YAMIRSSVDSSLDIDMDLWASKSNDNPVFYVQYAHARLCSLARKAEDLG--VTREGADLS 456 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ + E D LI L E+P V++ A +EP+++A Y LA FH + + P Sbjct: 457 LLTHDREGD-----LIRTLGEFPAVVKTAAELREPHRVARYAESLAGTFHRFYDACQILP 511 Query: 544 RLRFVQ---ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + A N+ L RL L A + + L ++GV +P M Sbjct: 512 KPSDDEQTVAENKALFAARLSLAAASRQTLANALELLGVAAPERM 556 >gi|91781601|ref|YP_556807.1| arginyl-tRNA synthetase [Burkholderia xenovorans LB400] gi|123359228|sp|Q146I4|SYR_BURXL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|91685555|gb|ABE28755.1| arginyl-tRNA synthetase [Burkholderia xenovorans LB400] Length = 596 Score = 520 bits (1340), Expect = e-145, Method: Composition-based stats. Identities = 192/615 (31%), Positives = 309/615 (50%), Gaps = 63/615 (10%) Query: 7 FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 + L + +K++ + + + I +ERP+ AHG ++ N AM L++PL +P Sbjct: 9 LETLLADTVKQVALASQGASEAAFVSPTITLERPKVAAHGDVACNVAMQLAKPLRANPRQ 68 Query: 64 IAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +A+ IV + P V++ +AG GFINL L+ + + +++++ +GR+ Sbjct: 69 LAQQIVDALLAQPGARDLVEAAEVAGPGFINLRLTAAAKQAVIAAVFAEKERFGRSQRDA 128 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G V IEFVSANPTGP+HVGH R A +GD L++++A G++V RE+Y NDAG QI TLAL Sbjct: 129 GKHVLIEFVSANPTGPLHVGHGRQAALGDALSNVLASQGWDVHREFYYNDAGVQIQTLAL 188 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233 S R + L D P Y G Y+ + K+ A + + + L + Sbjct: 189 STQARAR-GLAPGDEGWPASAYNGEYIADIAKDYLNGATVAASDGEPVTGARDVEDLEAI 247 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 + ++V + + DL+A ++ D + E ++ + + L G YE Sbjct: 248 RRFAVAYLRREQDMDLQAFGVKFDQYYLESSLYK--EGRVEKTVAALIAAGKTYE----- 300 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353 L R+T GDD DR + K+DG+YTYF D+AY K+ERGF +I Sbjct: 301 -----------QEGALWLRTTDDGDDKDRVMRKTDGTYTYFVPDVAYHVAKWERGFTKVI 349 Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 + GSDH G + R+ A + K + +L ++V + R+G +K+SKRAG ++T+R Sbjct: 350 NIQGSDHHGTIARVRAGLQGLGIGIPKGYPDYILHKMVTVMRNGEEVKISKRAGSYVTVR 409 Query: 412 HVVD---------EV------------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 +++ EV G D+VRF ++ RK FD +Q+ ENP Sbjct: 410 DLIEWSGGATPGSEVDVDLIDEETIRRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V YVQYA+AR S+ + K + + L +V P SE + L+ LAE+P +++ Sbjct: 470 VHYVQYAHARICSVIAECKARYNMDESTLADVDVTPLTSE---RAMALLNKLAEFPDMLQ 526 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A P+ +AFYL DLA FH ++ E V ++ R+ L+ A ++ Sbjct: 527 HAADELAPHAVAFYLRDLAGEFHSFYNDKAER-----VLVDDAAERNARVALLAATRQVL 581 Query: 571 NSGLNIIGVESPNEM 585 +GL IGV +P +M Sbjct: 582 ANGLATIGVSAPVKM 596 >gi|254251280|ref|ZP_04944598.1| Arginyl-tRNA synthetase [Burkholderia dolosa AUO158] gi|124893889|gb|EAY67769.1| Arginyl-tRNA synthetase [Burkholderia dolosa AUO158] Length = 593 Score = 520 bits (1339), Expect = e-145, Method: Composition-based stats. Identities = 198/616 (32%), Positives = 303/616 (49%), Gaps = 67/616 (10%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L AD ++ + LK D + I +ERP+ AHG ++ N AM L++PLG +P Sbjct: 12 LLADSVKQVAHALKGADAAF-----VPPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66 Query: 63 TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +AE IVA + P V++ IAG GFINL L+ + + ++ ++ G +G + Sbjct: 67 QLAEQIVAAVNAHPAAQGLVEAAEIAGPGFINLRLTAAAKQAVIGAVFAQGSAFGTSDRE 126 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA Sbjct: 127 KGKRVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPI 232 +S R + L D+ PE Y G Y+ + ++ A K + + L Sbjct: 187 ISTQARAR-GLKPGDAGWPEAAYNGEYIADIARDYMNCETVAAKDGEPVKGAGDVDDLDA 245 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + DL+A ++ D + E + + +D L + G YE Sbjct: 246 IRKFAVAYLRHEQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALIKAGMTYE---- 299 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L R+T GDD DR + KSDG+YTYF D+AY K+ERGF + Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTKV 347 Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 I + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+ Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTV 407 Query: 411 RHVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 R +++ G D+VRF ++ RK FD +Q+ EN Sbjct: 408 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 PV+YVQYA+AR S+ + + DL L+ LAEYP ++ Sbjct: 468 PVYYVQYAHARICSVLN---EWQSRYNGDLAQLPHADLSQLTSAQAASLMQKLAEYPDML 524 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 +A P+ +AFYL DLA FH ++ R V ++ R L+ A + Sbjct: 525 THAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577 Query: 570 INSGLNIIGVESPNEM 585 + +GL ++GV +P +M Sbjct: 578 LANGLAMLGVSAPAKM 593 >gi|139439094|ref|ZP_01772546.1| Hypothetical protein COLAER_01553 [Collinsella aerofaciens ATCC 25986] gi|133775441|gb|EBA39261.1| Hypothetical protein COLAER_01553 [Collinsella aerofaciens ATCC 25986] Length = 617 Score = 520 bits (1339), Expect = e-145, Method: Composition-based stats. Identities = 197/633 (31%), Positives = 312/633 (49%), Gaps = 74/633 (11%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 ++ L + LD IERP D +HG ++ A+ ++ P IAE Sbjct: 5 IEELVRAALAAAQEAGDLSAFELDDCAIERPADTSHGEWTSTMALKSAKLAHCAPRKIAE 64 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 IVA + DP ++ V IAG GFIN YLS + I G+++ ++ +G G K +E Sbjct: 65 AIVAHMPEDPAIEKVEIAGPGFINFYLSVAVKNAIFGEAREKGMDFAKSNVGGGLKTQVE 124 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANP GPMH+GH R A +GD+L +M +GY++ RE+YIND G+Q+NT S+ RY Sbjct: 125 FVSANPVGPMHIGHGRWAALGDSLCRVMDHAGYDIQREFYINDHGSQMNTFGNSISTRYM 184 Query: 187 QA-------------------------LYNNDSDLPE--------------GYYPGVYLK 207 Q + + + + PE Y G Y+ Sbjct: 185 QLADIIAKQGVDIDEAHKLLIADRDAFVADENDEHPETHPYQDNFAETLGKDSYGGDYII 244 Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 E + +N ++ + ++ M+ +RD A+N D + SE + Sbjct: 245 DEAAEFWRTDGDKWVNADPQERMESFRERGYVKMVDNMRDLCHAVNCDFDRWYSERSLYV 304 Query: 268 GD-------PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 D S + + L + GY+Y L FRST +GDD Sbjct: 305 KDTEGETAGTSAVDRAFEKLDKMGYLY----------------TKDGALWFRSTDLGDDK 348 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR L+KSDG YTYFA+D+AY K++R D++I + G+DH GY++R+ V A+ + Sbjct: 349 DRVLIKSDGEYTYFASDVAYHWDKFQR-VDHVIDIWGADHHGYIERVRCVCDALGY-PGK 406 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 VLL +LV L R+G P++MSKR G +TL+ +VDEVGSD+ R+ ++ + +++++DFD Sbjct: 407 FEVLLGQLVNLLRNGKPVRMSKRKGTMVTLQELVDEVGSDAARYTLISKSSNQMVDFDIE 466 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQE--------SEFD 492 VK++ NPV+YVQYA+AR SI R+A D+ P+ ++ + V + D Sbjct: 467 AVKKRDNSNPVYYVQYAHARVCSILRRAADVTPEQADEMGMKAVAAKAIGENVDYSLLTD 526 Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552 +EL L L E +I + + P++L + +LA FH ++ + P + + Sbjct: 527 PTELALSRKLNELTDLIASCARDRAPFRLTHFAEELAGDFHSFYAACQVLPSEG--RPVD 584 Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +L+ RL AV + L ++GV +P +M Sbjct: 585 PELSRARLAACDAVRVTLALVLTLVGVSAPEQM 617 >gi|221070006|ref|ZP_03546111.1| arginyl-tRNA synthetase [Comamonas testosteroni KF-1] gi|220715029|gb|EED70397.1| arginyl-tRNA synthetase [Comamonas testosteroni KF-1] Length = 571 Score = 519 bits (1338), Expect = e-145, Method: Composition-based stats. Identities = 176/569 (30%), Positives = 294/569 (51%), Gaps = 47/569 (8%) Query: 35 ERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP----DVDSVFIAGKGFIN 90 E P+ AHG + AAM L++PL +P + E + ++ VD++ IAG GF+N Sbjct: 32 ENPKVAAHGDFACTAAMQLAKPLKANPRALGEQLKTALEATAAFQQWVDAIEIAGPGFLN 91 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 + L P+ ++++ ++ ++G +G + +EFVSANPTGP+HVGH R A +GD + Sbjct: 92 IRLKPAAKQEVVREVLAQAEKFGYQ-ADRGENILVEFVSANPTGPLHVGHGRQAAIGDAI 150 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL-------YNNDSDLPEGYYPG 203 ++L + G++V RE+Y NDAG QI+TL S R + ++D+ L + +Y G Sbjct: 151 SNLYSSQGWKVHREFYYNDAGVQIDTLTKSTQLRAKGFKPGDECWPTDSDNPLAKNFYNG 210 Query: 204 VYLKHVGKELADKY-----SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDI 258 Y+ + K +K E + + ++ ++V + DL+A N++ D Sbjct: 211 DYIADIAKAFLNKETIKADDREFTANGDVEDYDNIRQFAVAYLRNEQDKDLQAFNLKFDE 270 Query: 259 FISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGD 318 + E + + + ++ L G YE L RST GD Sbjct: 271 YYLESSLY--ENGHVEATVNRLIANGKTYE----------------QDGALWLRSTDYGD 312 Query: 319 DVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSE 376 D DR + K+DG YTYF D+AY K++RGF ++ + G+DH G + R+ A A V Sbjct: 313 DKDRVMRKTDGGYTYFVPDVAYHIQKFKRGFTKVVNIQGTDHHGTIARVRAGLQAADVGI 372 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 + + +L +VR+ R+G +K+SKRAG ++TLR +++ D+VRF +L RK Sbjct: 373 PEGYPDYVLHTMVRVVRNGEEVKISKRAGSYVTLRDLIEWTSKDAVRFFLLSRKPDTEYT 432 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD Q+ +NPV+YVQYA+AR +S+ R ++ L ++ E Sbjct: 433 FDVDLAVAQNNDNPVYYVQYAHARIQSVLRAWQEAGGAGVPALKDVDLSALEG---PQAQ 489 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 L++ LA+YP ++ A P+ + FYL DLAS +H ++ R + ++ K+ Sbjct: 490 ALMLLLAKYPEMLTAAAEGNAPHDVTFYLRDLASSYHSYYDAER-------ILVDDEKVK 542 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL LV A A ++++GL ++GV +P M Sbjct: 543 LARLALVAATAQVLHNGLAVLGVSAPERM 571 >gi|152980236|ref|YP_001351803.1| arginyl-tRNA synthetase [Janthinobacterium sp. Marseille] gi|166232796|sp|A6SU56|SYR_JANMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|151280313|gb|ABR88723.1| arginyl-tRNA synthetase [Janthinobacterium sp. Marseille] Length = 577 Score = 519 bits (1338), Expect = e-145, Method: Composition-based stats. Identities = 195/609 (32%), Positives = 302/609 (49%), Gaps = 58/609 (9%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + A RL + + + I +ERPRD +HG ++ N AM +++PL +P Sbjct: 1 MLAAQKQRLTELFQAAVAPLVASTDLQPTITLERPRDPSHGDVACNLAMQIAKPLKKNPR 60 Query: 63 TIAELIVARIKIDPDV----DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +A+ + A + +P ++ IAG GFINL L+ + + ++ +++ G E+G++ +G Sbjct: 61 EVAQALAAALLDNPANRDLIEAADIAGPGFINLRLTAASRQAVVKTVLQQGAEFGKSNLG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KV IEFVSANPTGP+HVGH R +GD ++SL GY+VTRE+Y NDAG QI TLA Sbjct: 121 NDKKVIIEFVSANPTGPLHVGHGRQGALGDAMSSLFQAQGYDVTREFYYNDAGVQIATLA 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY------SSELLNFPEEKWLPI 232 SV R + L PE Y G Y++ + + K + + + Sbjct: 181 TSVQAR-GKGLKPGVEGWPESAYNGDYIQDIANDFLAKKTVSASNGEPVTASGDINDIES 239 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ +SV + + DL+A ++ D + E + + +D L + YE Sbjct: 240 IRQFSVTYLRREQDLDLQAFGVKFDNYYLESSLYA--DGKVEKTVDALIKADKTYEL--- 294 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L R+T DD DR + KSDG+YTYF D+AY K++RGF Sbjct: 295 -------------DGALWLRTTDYRDDKDRVMKKSDGTYTYFVPDVAYHTVKWQRGFTQA 341 Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 I V GSDH G + R+ A A+ + + +L ++V + R+G +K+SKRAG ++TL Sbjct: 342 INVQGSDHHGTIARVRAGLQALDIGIPQGYPDYVLHKMVTVMRNGEEVKISKRAGSYVTL 401 Query: 411 RHVVD----EV----------GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQY 456 R +++ EV G D+VRF ++ RK FD Q ENPV+YVQY Sbjct: 402 RDLIEWSNGEVVDGEVRDLTRGRDAVRFFLISRKADTEFVFDVDIALTQGDENPVYYVQY 461 Query: 457 AYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQ 516 A+AR S+ Q D D + + E L+ LAEYP ++ A Sbjct: 462 AHARICSVLAQW------TDGDEASLDKVDLSPLTAARETALLAKLAEYPETLQKALEEL 515 Query: 517 EPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNI 576 P+++AFYL DLA H +++ R V ++ L M R+ L+ A ++ +GL + Sbjct: 516 GPHQVAFYLRDLAGELHSYYNAER-------VLVDDEALKMARIALMSATRQVLRNGLAL 568 Query: 577 IGVESPNEM 585 IGV +P M Sbjct: 569 IGVSAPARM 577 >gi|325521346|gb|EGD00194.1| arginyl-tRNA synthetase [Burkholderia sp. TJI49] Length = 593 Score = 519 bits (1338), Expect = e-145, Method: Composition-based stats. Identities = 195/616 (31%), Positives = 306/616 (49%), Gaps = 67/616 (10%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L AD ++ + LK D + I +ERP+ AHG ++ N AM L++PLG +P Sbjct: 12 LLADSVKQVAHALKGADAAF-----VAPTITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66 Query: 63 TIAELIVARI----KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +AE IVA + V++ IAG GFINL L+ + + ++++++ G +G + Sbjct: 67 QLAEKIVAELTARPDAQGLVEAAEIAGPGFINLRLTAAAKQAVVTAVLAQGRAFGTSERE 126 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA Sbjct: 127 KGKRVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPI 232 +S R + L D+ PE Y G Y+ + ++ A K + + + L Sbjct: 187 ISTQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNGETVAAKDGEPVKGAGDVEDLDA 245 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + DL+A ++ D + E + + +D L + G YE Sbjct: 246 IRKFAVAYLRHEQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALIKAGMTYE---- 299 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L R+T GDD DR + KSDG+YTYF D+AY K+ERGF + Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTQV 347 Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 I + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+ Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKLSKRAGSYVTV 407 Query: 411 RHVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 R +++ G D+VRF ++ RK FD +Q+ EN Sbjct: 408 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 PV+YVQYA+AR S+ ++ + ++ L+ LAEYP ++ Sbjct: 468 PVYYVQYAHARICSVLN---ELKSRYNVEVAQLPGADLSQLTSPQAASLMQKLAEYPDML 524 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 +A P+ +AFYL DLA FH ++ R V ++ R L+ A + Sbjct: 525 THAAKELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577 Query: 570 INSGLNIIGVESPNEM 585 + +GL ++GV +P +M Sbjct: 578 LENGLAMLGVSAPAKM 593 >gi|108804495|ref|YP_644432.1| arginyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941] gi|108765738|gb|ABG04620.1| arginyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941] Length = 543 Score = 519 bits (1338), Expect = e-145, Method: Composition-based stats. Identities = 194/581 (33%), Positives = 300/581 (51%), Gaps = 42/581 (7%) Query: 7 FSSRLKNYLK-EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 F RL ++ + +E LD + +ERP D HG +TN A+ +R +P +A Sbjct: 3 FEGRLAEAVRGAVREAYGLE---LDGVHVERPNDPRHGDFATNVALANARTFRRNPRQVA 59 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 E + R++ P V V +AG GFIN L+P + + + +IV G YGR + G +N+ Sbjct: 60 EELAGRLRA-PFVREVEVAGPGFINFRLAPEAVWEEIGAIVREGTGYGR-VPPSGDPINV 117 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+HV H R A GD LA ++ +G V+REYY ND G QI SV RY Sbjct: 118 EFVSANPTGPLHVAHGRHAAYGDALARILEAAGRRVSREYYFNDGGNQIRLFGESVADRY 177 Query: 186 QQALYNN-DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 + P+ Y G Y + + ++L++ + + LL E+ L I+ D++ + M+ Sbjct: 178 ARLYGRAWPVSDPDALYKGDYTEEIARDLSEAHGASLLEMEPEEALRIIGDFAARWCMED 237 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 I+ L+ + D + +E + + +++ I+ L G YE Sbjct: 238 IKRTLERARVGFDTYFNEKSLY--ESGAVQETIERLREAGCAYE---------------- 279 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 L S+ GDD DR L+KSDGSYTY A D+AY K+ RGF I ++G+DH+GY Sbjct: 280 KDGALWLASSRFGDDKDRVLVKSDGSYTYVAPDIAYHLDKWSRGFRRAINILGADHAGYG 339 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 RL A A+ + ++V L LV+L R+G +K SKRAG+ +T ++DEVG D R+ Sbjct: 340 TRLRAGLVALGLPEDFLDVELVRLVKLLREGRQVKFSKRAGNIVTFDELLDEVGVDVARY 399 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 + + ++FD QS+ENPV+YVQYA+AR SIFR+A + + Sbjct: 400 FYVRSSHRNEMNFDLDLAIRQSEENPVYYVQYAHARICSIFRRAGEEAGEE--------- 450 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 E E L + L ++PRV+ A +E + + +L +A+ FH ++ R Sbjct: 451 -VPPGELAPEERLLALELIDFPRVVRGAADRREVHPVPAHLETVATRFHQFYTVHR---- 505 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V + ++ RL L A +I+ +GL ++GV +P M Sbjct: 506 ---VLVEDGEVRARRLALCAATRNILAAGLGLLGVRAPERM 543 >gi|237755374|ref|ZP_04584002.1| arginyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5] gi|237692458|gb|EEP61438.1| arginyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5] Length = 553 Score = 519 bits (1338), Expect = e-145, Method: Composition-based stats. Identities = 210/584 (35%), Positives = 334/584 (57%), Gaps = 32/584 (5%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + ++ N LK+ + + + + D+I IE P++ G LSTNAA ILS+ L P Sbjct: 1 MKQEIRDKILNILKQNNL---LFEGVEDKIKIESPKEEKFGDLSTNAAFILSKNLNKKPF 57 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +A + + DP + V +AG GFINL++S ++ +IL+ + E+G+ K Sbjct: 58 EVANQLKELFEKDPYFEKVEVAGGGFINLFISDAFYHQILNKAIEEKDEFGKAKEKNKGK 117 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 +NIE+VSANPTGP+H+GH R AVVG+ L++L + GY+V RE+YINDAG QI L +SV+ Sbjct: 118 INIEYVSANPTGPLHLGHGRGAVVGNILSNLYDYIGYKVEREFYINDAGNQIKKLGMSVY 177 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF-PEEKWLPIVKDYSVQAM 241 R++Q + PE Y G Y+K + KE+ ++L+F EE+ + +Y+ + Sbjct: 178 ARFRQ-IEEPSYPFPEDGYHGEYIKDIAKEIYHYEREKILSFLDEEEAIEFCAEYAKNFL 236 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 + I+ DLK + ++ DI+ SE ++ + + L +G +YE Sbjct: 237 LDEIKKDLKLIGVEFDIWYSERHLYQH--GKVEQALKFLESKGLIYE------------- 281 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 L ++++ GD+ DR + KSDGSYTYFAAD+AY KY R +D +I V G+DH Sbjct: 282 ---KDGALWLKTSLYGDEKDRVIRKSDGSYTYFAADIAYHYDKYLRNYDFIINVWGADHH 338 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 GY RL+A A K+ INVL +LV+L+++G +KMSKR+GDFITLR +V+EVG D+ Sbjct: 339 GYFPRLKAAIMAFGVKEDWINVLFIQLVKLFKNGEEVKMSKRSGDFITLRELVEEVGKDA 398 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 V + + + L+FD ++S ENPVFYVQYA+AR S+FR+A+ F + F Sbjct: 399 VIYFFASKDPNTHLNFDIDIALKKSNENPVFYVQYAHARISSVFREAQQRFNFNPEEDFE 458 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 ++ + + E L+ +++ P I +ATI +P+K+ Y+LAS H ++ + Sbjct: 459 ADLSLLKEDL---ERSLMKYISTIPDEIYDATIKNQPHKITNITYELASRLHKYYYYH-- 513 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +F+ N+ KL RL L+ AV +++ + I+G+ M Sbjct: 514 ----KFLIENDEKLMKARLYLLKAVRNVLRTLFKIMGITPVERM 553 >gi|225848845|ref|YP_002729009.1| arginyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1] gi|225643540|gb|ACN98590.1| arginyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1] Length = 552 Score = 519 bits (1338), Expect = e-145, Method: Composition-based stats. Identities = 209/581 (35%), Positives = 327/581 (56%), Gaps = 31/581 (5%) Query: 7 FSSRLKNYLKEIDCKIKVEK-KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 ++ + EI K ++ +I D+I +E P++ + G L+TN A +L++ L P IA Sbjct: 1 MKKEVREKIVEILKKEELFYPEIEDKIKVEPPKEESFGDLATNVAFLLTKHLKQKPQDIA 60 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 E I + ++ DP V + GFINL+LS SY ++ V G +G N K+NI Sbjct: 61 EKIKSLLEKDPTFSKVEVLN-GFINLFLSDSYYHSVVKKAVEEGDSFGENKEKNRGKINI 119 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 E+VSANPTGP+H+GH R AVVG+ L+++ ++ GY+V RE+YINDAG QI L SV+ R+ Sbjct: 120 EYVSANPTGPLHLGHGRGAVVGNLLSNMYSYIGYKVEREFYINDAGNQIKKLGQSVYARF 179 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF-PEEKWLPIVKDYSVQAMMKI 244 +Q + D PE Y G Y+K + KE+ ++L+ EE + +Y+ ++ Sbjct: 180 RQ-IEEPDFPFPEDGYHGEYIKDIAKEIYHYEREKILSMLSEEDAVEFCAEYAKNYLLDK 238 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 I++DLK +N+ DI+ SE ++ + + L +G +YE Sbjct: 239 IKEDLKLINVDFDIWTSEKSLYQH--GKVDQALKFLEEKGMIYE---------------- 280 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 L ++++ GD+ DR + KSDGSYTYFAAD+AY KYERG+D +I V G+DH GY Sbjct: 281 KDGALWLKTSLYGDEKDRVIKKSDGSYTYFAADIAYHYDKYERGYDFIINVWGADHHGYF 340 Query: 365 KRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 RL+A A ++ INV+ +LV+L+++G +KMSKR+GDFITLR +V+EVG D+V + Sbjct: 341 PRLKAAVMAFGVREDWINVVFIQLVKLFKNGEEVKMSKRSGDFITLRELVEEVGKDAVIY 400 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 + + L+FD +S ENPV+YVQYA+AR S+FR+AK+ F +FD Sbjct: 401 FFASKDPNTHLNFDIDVALAKSNENPVYYVQYAHARISSVFREAKERF---NFDPEKDFE 457 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 E ++ L+ P+ IE AT+ +EP+K+ Y+LAS H ++ Sbjct: 458 ADLSLLTQEEEKSIMKFLSNLPQEIEEATLKKEPHKITSLTYELASKLHKYYYQH----- 512 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +F+ + KL RL L+ A+ + + + ++G+ M Sbjct: 513 -KFLIETDEKLMKARLYLLKAIRNALRTLFKLMGITPVERM 552 >gi|302335535|ref|YP_003800742.1| arginyl-tRNA synthetase [Olsenella uli DSM 7084] gi|301319375|gb|ADK67862.1| arginyl-tRNA synthetase [Olsenella uli DSM 7084] Length = 614 Score = 519 bits (1338), Expect = e-145, Method: Composition-based stats. Identities = 186/629 (29%), Positives = 310/629 (49%), Gaps = 69/629 (10%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 +K + + + ++ +ERP D ++G S+ AM +R + P IA+ Sbjct: 5 IEELVKQAIAAAQSAGALPEFEIEDYGLERPADTSNGDWSSTVAMRSARLARMAPAKIAK 64 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 IV + DP + V +AG GFIN YLS S ++ ++ +G ++G++ +G G KVN E Sbjct: 65 AIVDNMPPDPAITRVEVAGPGFINFYLSTSAHNEVFRTVREAGSDWGKSNVGDGLKVNYE 124 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 F+SANPTGP+HVGH R A +GD++ ++ + ++VTREYYIND G+Q++ SV RY Sbjct: 125 FISANPTGPLHVGHGRWAALGDSMCNVFEHTNHKVTREYYINDHGSQMDVFGRSVAMRYL 184 Query: 187 QA-------------------------LYNNDSDLPEGY--------------YPGVYLK 207 Q + + + PE + Y G Y+ Sbjct: 185 QLDQAIKAEGFGLEDAVRLLLQDRESYVDDEQDEHPELHPYMDAFNEVLGGNSYGGDYII 244 Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 + +E + + ++ E+ P ++ + QAM++ I+ + D++ SE +R Sbjct: 245 QIAREFYEADGDKWVSAEPEERDPEFRERAYQAMLRRIKATCHTVRCDFDLWFSERSLYR 304 Query: 268 GDPS---PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 D + L GY+Y+ D L F+ST GDD DR L Sbjct: 305 KDTDGTSQVDRAFRRLDEMGYLYK---------------TDDGALWFKSTAFGDDKDRVL 349 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 +KS+G YTYFA+D+AY K++R + I + G+DH GY+ R+ V A+ + V Sbjct: 350 VKSNGEYTYFASDVAYHWNKFQRD-EYSIDLWGADHHGYIARVTNVCDALGY-PGKFEVD 407 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L + V L RDG P++MSKR G ++ ++ EVG D+ R+ ++ R +++ +DFD VK+ Sbjct: 408 LGQFVNLLRDGEPVRMSKRKGTMVSFDELIAEVGVDATRYTLISRSSNQTIDFDIEAVKQ 467 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI--------PQESEFDTSEL 496 + NPV+YVQYA+AR SI R+A + D ++ V D +E Sbjct: 468 KDNANPVYYVQYAHARICSILRKAAGVGEDEAVEMGMDEVAKRAIGPAYDLSLLTDATEA 527 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 L L+E+P ++ + P+++ + +LA+ FHG ++ + P + + +L+ Sbjct: 528 SLARKLSEFPELVAGCARDRAPFRITHFCEELAAAFHGFYASCQVLPSEG--RPVDAELS 585 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL AV + L +IGV +P+ M Sbjct: 586 RARLAACDAVRVNLEVALRLIGVSAPDVM 614 >gi|264680676|ref|YP_003280586.1| arginyl-tRNA synthetase [Comamonas testosteroni CNB-2] gi|262211192|gb|ACY35290.1| arginyl-tRNA synthetase [Comamonas testosteroni CNB-2] Length = 569 Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats. Identities = 176/573 (30%), Positives = 294/573 (51%), Gaps = 47/573 (8%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP----DVDSVFIAGK 86 R E P+ AHG + AAM L++PL +P + E + ++ VD++ IAG Sbjct: 26 RAAFENPKVAAHGDFACTAAMQLAKPLKANPRALGEQLKTALEATAAFQQWVDAIEIAGP 85 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GF+N+ L P+ ++++ ++ ++G +G + +EFVSANPTGP+HVGH R A + Sbjct: 86 GFLNIRLKPAAKQEVVREVLAQAEKFGYQT-DRGENILVEFVSANPTGPLHVGHGRQAAI 144 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL-------YNNDSDLPEG 199 GD +++L + G++V RE+Y NDAG QI+TL S R + ++++ L + Sbjct: 145 GDAISNLYSTQGWKVHREFYYNDAGVQIDTLTKSTQLRAKGFKPGDECWPTDSENPLAKN 204 Query: 200 YYPGVYLKHVGKELADKY-----SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254 +Y G Y+ + K K E + + ++ ++V + DL+A N+ Sbjct: 205 FYNGDYIADIAKAFLAKETIKADDREFTANGDVEDYDNIRQFAVAYLRNEQDKDLQAFNL 264 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 + D + E + + + ++ L G YE L RST Sbjct: 265 KFDEYYLESSLY--ENGHVEATVNRLIANGKTYE----------------QDGALWLRST 306 Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA- 373 GDD DR + K+DG YTYF D+AY K++RGF ++ + G+DH G + R+ A A Sbjct: 307 DYGDDKDRVMRKTDGGYTYFVPDVAYHIQKFKRGFTKVVNIQGTDHHGTIARVRAGLQAA 366 Query: 374 -VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 V + + +L +VR+ R+G +K+SKRAG ++TLR +++ D+VRF +L RK Sbjct: 367 DVGIPEGYPDYVLHTMVRVVRNGEEVKISKRAGSYVTLRDLIEWTSKDAVRFFLLSRKPD 426 Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492 FD Q+ +NPV+YVQYA+AR +S+ R ++ L ++ E Sbjct: 427 TEYTFDVDLAVAQNNDNPVYYVQYAHARIQSVLRAWQEAGGAGLAALKDVDLSALEG--- 483 Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552 L++ LA+YP ++ A P+ + FYL DLAS +H ++ R + ++ Sbjct: 484 PQAQALMLLLAKYPEMLTAAAEGNAPHDVTFYLRDLASSYHSYYDAER-------ILVDD 536 Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 K+ + RL LV A A ++++GL ++GV +P M Sbjct: 537 EKVKLARLALVAATAQVLHNGLAVLGVSAPERM 569 >gi|227503835|ref|ZP_03933884.1| arginyl-tRNA synthetase [Corynebacterium striatum ATCC 6940] gi|227199659|gb|EEI79707.1| arginyl-tRNA synthetase [Corynebacterium striatum ATCC 6940] Length = 553 Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats. Identities = 181/586 (30%), Positives = 295/586 (50%), Gaps = 34/586 (5%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGL 59 M D S +K + + +++ +L + +ERPR+ HG +TN A+ +++ G+ Sbjct: 1 MNPV-DLSVLIKETAVAVLSEHELDTAVLPETVTVERPRNPEHGDYATNLALQVAKKAGV 59 Query: 60 DPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +P +A + + +D IAG GF+N+ L+ + I+ + +G YG N K Sbjct: 60 NPRELATWLAEALAKHDAIDVAEIAGPGFLNIRLAAAAQGAIVDQVRQAGTNYGHNDAYK 119 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G K+N+EFVSANPTGP+H+G R A VGD+L ++ SG EVTREYY ND G QI+ + Sbjct: 120 GQKINLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAEVTREYYFNDHGRQIDRFSN 179 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ + PE Y G Y++ + + ++ L E++ + V+ Sbjct: 180 SLVAAAK------GEPTPEDGYGGEYIQEIAANVQNQVPDA-LEGTEDEVREKFRAAGVE 232 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 M I++ L + D++ E+ + + + +L +Y Sbjct: 233 MMFAHIKESLHEFGVDFDVYFHENSLF--ESGAVDKAVAHLKDNEKLY------------ 278 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + +ST GDD DR ++KSDG Y A D+AY K++RG D IY++G+D Sbjct: 279 ----FEDGAWWLKSTDYGDDKDRVVIKSDGDAAYIAGDIAYVADKFDRGHDLAIYMLGAD 334 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL A AAA+ Q+ VL+ ++V L RDG ++MSKRAG ITL +V+ +G Sbjct: 335 HHGYIARLRAAAAAMGYNPEQVEVLIGQMVNLLRDGKAVRMSKRAGTVITLDDLVEAIGV 394 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D R+ ++ + +D D QS +NPV+YVQY +AR SI R+A+++ D Sbjct: 395 DGARYSLVRSSVDQSIDIDLGLWASQSSDNPVYYVQYGHARICSILRKAQELGLDA---- 450 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 E LI L E+P V+ A +EP+++A + DLA+VFH + Sbjct: 451 AAMADADLALLTHEKEGDLIRTLGEFPEVVSTAATLREPHRIARFAEDLAAVFHRFYDQC 510 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + P+ + + + RL L A ++ + L ++GV +P +M Sbjct: 511 QVLPK---AGEETQPIHIARLALADAARQVLANALTMVGVSAPEKM 553 >gi|329901351|ref|ZP_08272796.1| Arginyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] gi|327549132|gb|EGF33727.1| Arginyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] Length = 553 Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats. Identities = 204/585 (34%), Positives = 304/585 (51%), Gaps = 65/585 (11%) Query: 33 VIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDV----DSVFIAGKGF 88 V+ERPRD AHG +S N AM L++PL +P +A+ +VA + DP D+V IAG GF Sbjct: 2 VLERPRDPAHGDVSCNIAMQLAKPLKKNPRELAQQLVAALLADPARAGLVDAVEIAGPGF 61 Query: 89 INLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGD 148 INL L+ + ++++ +++ +YGR +G G KV +EFVSANPTGP+HVGH R A +GD Sbjct: 62 INLRLALAARQEVVHTVLQEAADYGRGTLGTGRKVLLEFVSANPTGPLHVGHGRQAALGD 121 Query: 149 TLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKH 208 L++L A GY+V RE+Y NDAG QI TLA SV R + D+D PE Y G Y+ Sbjct: 122 ALSALFAVQGYDVMREFYYNDAGVQIATLAASVQARAR-GFKPGDADWPEPAYNGDYIGD 180 Query: 209 VGKELA------DKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISE 262 + + + ++ + L ++ + V + + DL+A ++ D + E Sbjct: 181 IALDFLAGKTVSAADCAPVIASGDVDDLDSIRQFGVAYLRREQDLDLQAFGVKFDNYYLE 240 Query: 263 DDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDR 322 + + +D L + G YE L R+T GDD DR Sbjct: 241 SSLY--GDGKVHAAVDALIKAGKTYEL----------------DGALWLRTTDYGDDKDR 282 Query: 323 PLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQ 380 + KSDG+YTYF D+AY K++RGF N I + GSDH G + R+ A A + K Sbjct: 283 VMKKSDGTYTYFVPDVAYHIVKWQRGFGNAINIQGSDHHGTIARVRAGLQAVDLGIPKGY 342 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD----EV----------------GSD 420 + +L ++V + +DG +K+SKRAG ++TLR +++ EV G D Sbjct: 343 PDYVLHKMVTVMKDGEEVKISKRAGSYVTLRDLIEWSSGEVEVVTDAANDAPRDLTRGRD 402 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 +VRF ++ RK FD + QS ENPV+YVQYA+AR S+ Q LD Sbjct: 403 AVRFFLISRKADTEFIFDVDLARAQSDENPVYYVQYAHARICSVLAQWGGDESVLDG--- 459 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 + E L+ LA+YP +E+A P+++AFYL DLA H +++ R Sbjct: 460 ----VDLSPLTAPREASLLARLADYPEALEHALEELGPHQVAFYLRDLAGELHSYYNAER 515 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V ++ M RL L+ A ++ +GL++IGV +P M Sbjct: 516 -------VLVDDMPTRMARLALMLATRQVLRNGLSLIGVSAPLRM 553 >gi|57233947|ref|YP_181982.1| arginyl-tRNA synthetase [Dehalococcoides ethenogenes 195] gi|109894986|sp|Q3Z717|SYR_DEHE1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|57224395|gb|AAW39452.1| arginyl-tRNA synthetase [Dehalococcoides ethenogenes 195] Length = 556 Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats. Identities = 194/589 (32%), Positives = 312/589 (52%), Gaps = 37/589 (6%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILD---RIVIERPRDCAHGHLSTNAAMILSRPL 57 M + + L + K + E +I I IE P+ +G +T+ + L++ Sbjct: 1 MNSILAIKNIIIESLSQALEKARQEGQIPALSVDISIEHPQKTNYGDYATSLPLRLAKAT 60 Query: 58 GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117 G P+ +AE++ I+ + V +A GFIN S +L ++ +I+ YG + Sbjct: 61 GKRPMELAEILAGYIEPGEGIAKVSVAPPGFINFTFSKEWLCNLVKTILGEAESYGNINM 120 Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 G G++V IEFVSANPTGP+H+GH R AV+G TL++++ +GY V E+YINDAG+QI+ Sbjct: 121 GGGSRVQIEFVSANPTGPIHIGHGRGAVLGSTLSNVLKAAGYYVEEEFYINDAGSQIDAF 180 Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237 ++F RYQQAL ++ +P+ Y G Y+ + E+ KY + L P E + + Sbjct: 181 KRTLFARYQQAL-GKEAAVPQDGYHGQYMVELAAEMVAKYGDKYLQMPLEIAQNDLGEIG 239 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 + M+ +I DDLK+L + D++ SE + G + +D L Y+ E Sbjct: 240 MARMLCLISDDLKSLKVDFDVWFSERSLYSG--GQYKTAMDILLANNYIAE--------- 288 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVM 356 F ST++GD D +++SDG+ TYFA+D+AY K+ ER FD +I + Sbjct: 289 -------RDNATWFSSTLLGDSKDNVIVRSDGTPTYFASDIAYHYNKFIERKFDRVINIW 341 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G+DH G+V R++A+ +A+ ++ LL +++ L R G +++SKR G+ I+L V++E Sbjct: 342 GADHQGHVSRMKAMLSALGINPERLTTLLFQMITLKRGGELVRLSKRTGEMISLSEVIEE 401 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG+D+ RF L R +DFD K++S ENPV+YVQYA+AR SI AK+ Sbjct: 402 VGADACRFFFLSRSTESQMDFDLELAKKESAENPVYYVQYAHARICSILSLAKEKGLSYS 461 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 E E I +AE P ++E EP+ L +Y +LA+ FH + Sbjct: 462 GGDTALLGEEAELEL-------IRKMAELPEIVETVARTLEPHHLTYYAQELANAFHQFY 514 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R V ++N +L+ RL+LV A ++ L+++G+ SP M Sbjct: 515 KDCR-------VISDNTELSSARLKLVDASRIVLARTLHLMGMTSPQSM 556 >gi|15606252|ref|NP_213630.1| arginyl-tRNA synthetase [Aquifex aeolicus VF5] gi|6226192|sp|O67068|SYR_AQUAE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|2983452|gb|AAC07033.1| arginyl-tRNA synthetase [Aquifex aeolicus VF5] Length = 583 Score = 519 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 217/615 (35%), Positives = 336/615 (54%), Gaps = 72/615 (11%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 ++ LKE+ ++ +E+P++ AHG L++N A +L+R L P+ IA+ Sbjct: 5 VKEKVLKALKELYNTQ------VENFKVEKPKEEAHGDLASNVAFLLARELKKPPVNIAQ 58 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 + + D SV A KGFIN S +L++ ++SG Y + +GKG KV +E Sbjct: 59 ELADFLSKDETFKSVE-AVKGFINFRFSEDFLKEEFKKFLLSGEAYFKEDLGKGLKVQLE 117 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 +VSANPTGP+H+GH R AVVGDTLA L F Y+VTREYYINDAG Q+ L +S+++RY Sbjct: 118 YVSANPTGPLHLGHGRGAVVGDTLARLFKFFNYDVTREYYINDAGRQVYLLGISIYYRYL 177 Query: 187 QALYNNDSD--------LPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKD--- 235 + D + + Y G Y+K + + L L PEE L V++ Sbjct: 178 EKCPERDEETFKEIKEIFEKDGYRGEYVKEIAERLRKLVGESLCK-PEEANLKEVREKIL 236 Query: 236 ------------------------YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 Y + MMK IR+DL ++I D++ SE + D Sbjct: 237 KEESIELYYTKKYEPKDVVDLLSNYGLDLMMKEIREDLSLMDISFDVWFSERSLY--DSG 294 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + +I+ L +GYVYE L ++++ GDD DR + +SDG+Y Sbjct: 295 EVERLINLLKEKGYVYE----------------KDGALWLKTSLFGDDKDRVVKRSDGTY 338 Query: 332 TYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRL 391 TYFA+D+AY K++RGF+ +I V G+DH GY+ R++A + + + +LL ++V+L Sbjct: 339 TYFASDIAYHYNKFKRGFEKVINVWGADHHGYIPRVKAALKMLEIPEDWLEILLVQMVKL 398 Query: 392 YRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPV 451 +R+G +KMSKRAG F+TLR ++DEVG D+VRF+ L +++ LDFD K KE+S ENPV Sbjct: 399 FREGKEVKMSKRAGTFVTLRELLDEVGKDAVRFIFLTKRSDTPLDFDVEKAKEKSSENPV 458 Query: 452 FYVQYAYARCRSIFRQAKDIF-PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 +YVQYA+AR IFR+ K+ + D+ + V E + +E++LI + + + Sbjct: 459 YYVQYAHARISGIFREFKERYKKDVSVEELINYVQHLE---EEAEIKLIKKVLFFKDELV 515 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 + T+ +EP+ L +YL DLA FH +++H R + + RL LV + ++ Sbjct: 516 DITLKREPHLLTYYLIDLAGDFHHYYNHHR-------ILGMEENVMFSRLALVKGIKEVV 568 Query: 571 NSGLNIIGVESPNEM 585 GLN++GV +P M Sbjct: 569 RLGLNLMGVSAPERM 583 >gi|325295274|ref|YP_004281788.1| Arginyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065722|gb|ADY73729.1| Arginyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 546 Score = 519 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 205/579 (35%), Positives = 322/579 (55%), Gaps = 37/579 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 ++++ +KEI K ++D+ E+P+ +G L+TN + +L++ L P +IA Sbjct: 5 IKEKVRSAIKEIYNKEL--SYLVDKASFEKPKKREYGDLATNISFLLAKELKQKPFSIAN 62 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 ++ ++ P+ + V +AG GFIN + S + IL ++ E+ + IGKG +V +E Sbjct: 63 ELLKSLESMPEFEKVEVAGGGFINFFFSQRFYTDILKKVLHE--EFYISEIGKGERVLLE 120 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 +VSANPTGP+HVGH R AVVGD L +M +GY+ RE+YINDAG QI L +S++ R + Sbjct: 121 YVSANPTGPLHVGHGRGAVVGDVLYRVMRLTGYKPEREFYINDAGRQIKLLGVSIYARMK 180 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 + L + PE Y G Y+ V KEL + E+++ PEE+ + I ++ + +++ IR Sbjct: 181 E-LSGENYPFPEDGYKGEYIIEVAKELLAE-RPEIISLPEEEAIEIAAEFGKERLLEEIR 238 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 DLK L ++ D + SE + + + I+ L + +YE Sbjct: 239 KDLKDLRVKFDYWFSEKSLY--EKGEVERILKILEEKDLLYE----------------KD 280 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366 L ++T+ GDD DR + +S+G YTYFA+D+AY K ER FD I V G+DH GY+ R Sbjct: 281 GALWLKTTIFGDDKDRVVKRSNGEYTYFASDIAYHYNKIERNFDKAINVWGADHHGYIPR 340 Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 ++A A+ + + V+L +LV+L+++G +KMSKRAG+F+TLR ++DEVG D+VRF Sbjct: 341 VKAAIQALGKNPDWLEVILIQLVKLFKNGEEVKMSKRAGNFVTLRWLMDEVGVDAVRFFF 400 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 L +++ LDFD ENPV+YVQYA+AR SI +AK+ + Sbjct: 401 LLKRHDTPLDFDIDLALSSKSENPVYYVQYAHARLCSILDKAKEKGFVPSEENLELLSSE 460 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 +E E L +Y +E +EP++L +YL DLAS H ++ R Sbjct: 461 EERELIAGCYNL-----KYE--LELVAEKREPHRLTYYLIDLASKLHRFYNKHR------ 507 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + KL+ RL L+ AV IN GL+I+ V +P M Sbjct: 508 VIMEEDPKLSTARLSLIKAVRRTINLGLDILNVTAPRRM 546 >gi|119961159|ref|YP_948334.1| arginyl-tRNA synthetase [Arthrobacter aurescens TC1] gi|166232754|sp|A1R7X2|SYR_ARTAT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|119948018|gb|ABM06929.1| arginyl-tRNA synthetase [Arthrobacter aurescens TC1] Length = 549 Score = 519 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 194/584 (33%), Positives = 315/584 (53%), Gaps = 43/584 (7%) Query: 6 DFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + S+ + LK+ ++ E + D + +ERP++ HG +TN A+ LS+ G++P Sbjct: 5 ELSAAISACLKDAVSTGEIALTESAVPDAVRVERPKNRDHGDWATNIALQLSKQAGMNPR 64 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 A ++ ++ P V V IAG GF+N+ + + + +IV +G YG N G Sbjct: 65 EFAGILSNHLQGIPGVTGVEIAGPGFLNITVDAATAGALAKAIVEAGASYGTNQALAGRV 124 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VN+EFVSANPTGP+H+GH R A +GD +A ++ SG +VT EYYINDAG+Q+N A SV Sbjct: 125 VNMEFVSANPTGPLHIGHTRWAALGDAIARVLRASGADVTAEYYINDAGSQMNVFANSVL 184 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 R +PEG YPG Y++ +G E+ + + +E LP+++ + +A M Sbjct: 185 SRLH------GRGVPEGGYPGEYIRELGDEVLKAH-PGIRELTDEAALPVIRAAAYEAQM 237 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 I+ L ++ D+F SE + H D I + L QG+V++ Sbjct: 238 SDIKTTLAEFGVEFDVFFSEKELH--DAGAIESAVARLREQGHVFD-------------- 281 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 D + R+T GDD DR +++++G TYFAAD AY+ K +RGF IY++G+DH G Sbjct: 282 --DGGAVWLRTTDFGDDKDRVMIRANGEPTYFAADAAYYLSKKDRGFTEKIYLLGADHHG 339 Query: 363 YVKRLEAVAAAVSEKK-AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 Y+ RL+A+AA + I VL+ +LV + K+SKRAG+ I L+ ++ +G D+ Sbjct: 340 YINRLKAIAACAGDDPEVNIEVLIGQLVSV----NGAKLSKRAGNIIELKDLISWLGKDA 395 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 VR+ + L D +K+ S ENPVFYVQYA+AR R R A + +D +F Sbjct: 396 VRYSLARFPADSPLTLDPELLKKHSNENPVFYVQYAHARSRGTARNAAEAG--VDRSVFD 453 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 +++ + E +L+ +L YP ++ A +EP+++A +L +A +H + R Sbjct: 454 ASLLDHAT-----ENELLSYLGSYPSIVAKAAELREPHRVARHLEVIAGAYHRWYDACRV 508 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +P+ + + RL L A + ++ +GL ++GV +P M Sbjct: 509 SPQG---EEPVLDVNRTRLWLNDATSQVLANGLELLGVSAPERM 549 >gi|254295941|ref|ZP_04963398.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 406e] gi|157806017|gb|EDO83187.1| arginyl-tRNA synthetase [Burkholderia pseudomallei 406e] Length = 594 Score = 519 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 200/615 (32%), Positives = 317/615 (51%), Gaps = 65/615 (10%) Query: 7 FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 + L+N +K++ K + +L I +ERP+ AHG ++ N A+ L++PLG +P Sbjct: 9 LETLLENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQ 68 Query: 64 IAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +AE IVA + P+ VD+ IAG GFINL L+P+ + ++ +++ G +G + Sbjct: 69 LAEQIVAALTAQPEAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVLAQGRAFGASERDH 128 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA+ Sbjct: 129 GKRVLLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAI 188 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233 S R + L D+ PE Y G Y+ + ++ A + + + L + Sbjct: 189 STQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRDVEDLEAI 247 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 + ++V + + DLKA ++ D + E + + +D L G YE Sbjct: 248 RKFAVTYLRREQDMDLKAFGVKFDQYYLESSLYT--EGRVEKTVDALTAAGMTYE----- 300 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353 L R+T GDD DR + K+DG+YTYF D+AY K+ERGF +I Sbjct: 301 -----------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVI 349 Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+R Sbjct: 350 NIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVR 409 Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 +++ G D+VRF ++ RK FD +Q+ ENP Sbjct: 410 DLIEWSGGATPGSEGSPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+YVQYA+AR S+ + K + D L ++ P +S+ + L+ LAEYP V+ Sbjct: 470 VYYVQYAHARICSVINEWKSRYGATDALLPGADLSPLDSK---QAMALMQKLAEYPDVLA 526 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A P+ +AFYL +LAS FH ++ R V + + R L+ A ++ Sbjct: 527 HAAGELAPHAVAFYLRELASEFHSFYNAER-------VLVDEQAPRTARAALLAATRQVL 579 Query: 571 NSGLNIIGVESPNEM 585 +GL ++GV +P++M Sbjct: 580 ENGLAMLGVSAPSKM 594 >gi|260577572|ref|ZP_05845511.1| arginine--tRNA ligase [Corynebacterium jeikeium ATCC 43734] gi|258604296|gb|EEW17534.1| arginine--tRNA ligase [Corynebacterium jeikeium ATCC 43734] Length = 551 Score = 519 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 180/583 (30%), Positives = 291/583 (49%), Gaps = 36/583 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 S + + ++ ++ +ERPR+ HG +TN AM +++ G +P Sbjct: 1 MSELITETARTTLDAHGLDSSVVPESATVERPRNPEHGDYATNIAMQVAKKAGTNPREFG 60 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 + + +D +AG GFIN+ L+ + KI+ I+ +G +G G +N+ Sbjct: 61 TWLAESLGAHEGIDEATVAGPGFINIRLAAAAQGKIVEDILTAGANFGHGDELAGAAINL 120 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+H+G R A VGD+L ++ G +VTREYY ND GAQI+ A S+ Sbjct: 121 EFVSANPTGPIHLGGTRWAAVGDSLGRVLNARGAKVTREYYFNDHGAQIDRFARSLVAAA 180 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245 + PE Y G Y++ + ++ + + + ++ + + V+ M I Sbjct: 181 K------GEPTPEDGYGGDYIQDIASQIV-EANPDWQKLGADEAQELFRSQGVELMFAHI 233 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 + L + D++ E+ + + I + G +YE Sbjct: 234 KRTLAEFGTEFDVYFHENSLF--ESGAVEAAIQKIKDNGNLYEA---------------- 275 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365 RST GDD DR ++KSDG+ Y A D+AY K++RG + IY++G+DH GY+ Sbjct: 276 DGAWWLRSTNFGDDKDRVVIKSDGNAAYIAGDIAYVADKFDRGHNLCIYMLGADHHGYIA 335 Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425 RL A AAA+ Q+ VL+ +LV L +DG ++MSKRAG ITL +V+ +G D+ R+ Sbjct: 336 RLRAAAAAMGYDPQQVEVLIGQLVNLVKDGKAVRMSKRAGTVITLDDLVEAIGVDAARYA 395 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 M+ LD D +S +NPVFYVQYA+AR S+ R+A+D+ + + +++ Sbjct: 396 MIRSSVDSSLDIDMDLWASKSNDNPVFYVQYAHARLCSLARKAEDLG--VTREGADLSLL 453 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 + E D LI L E+P V++ A +EP+++A Y LA FH + + P+ Sbjct: 454 THDREGD-----LIRTLGEFPAVVKTAAELREPHRVARYAESLAGTFHRFYDACQILPKP 508 Query: 546 RFVQ---ANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + A N+ L RL L A + + L ++GV +P M Sbjct: 509 SDDEQTVAENKALFAARLSLAAASRQTLANALELLGVAAPERM 551 >gi|270308440|ref|YP_003330498.1| arginyl-tRNA synthetase [Dehalococcoides sp. VS] gi|270154332|gb|ACZ62170.1| arginyl-tRNA synthetase [Dehalococcoides sp. VS] Length = 556 Score = 519 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 192/589 (32%), Positives = 313/589 (53%), Gaps = 37/589 (6%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILD---RIVIERPRDCAHGHLSTNAAMILSRPL 57 M + + L + K + E +I I IE P+ +G +T+ + L++ Sbjct: 1 MNSILAIKNIIIESLSQALEKARQEGQIPALSVDISIEHPQKTNYGDYATSLPLRLAKAT 60 Query: 58 GLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLI 117 G P+ +AE++ I+ + V +A GFIN S +L ++ +++ YG + Sbjct: 61 GKRPMELAEILAGYIEPGEGIAKVSVAPPGFINFTFSKEWLCSLVKTVLGEAENYGNINM 120 Query: 118 GKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTL 177 G G++V IEFVSANPTGP+H+GH R AV+G TL++++ +GY V E+YINDAG+QI+ Sbjct: 121 GGGSRVQIEFVSANPTGPIHIGHGRGAVLGSTLSNVLKAAGYYVEEEFYINDAGSQIDAF 180 Query: 178 ALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYS 237 ++F RYQQAL ++ +P+ Y G Y+ + E+ KY + L P E + + Sbjct: 181 KRTLFARYQQAL-GKEAAVPQDGYHGQYMVELAAEMVAKYGDKYLQMPLEIAQNDLGEIG 239 Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297 + M+ +I DDLK+L + D++ SE + G + +D L+ Y+ E Sbjct: 240 MARMLCLISDDLKSLKVDFDVWFSERSLYSG--GQYKTAMDILSANNYIAE--------- 288 Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVM 356 F ST++GD D +++SDG+ TYFA+D+AY K+ ER FD +I + Sbjct: 289 -------RDNATWFSSTLLGDSKDNVIVRSDGTPTYFASDIAYHYNKFIERKFDRVINIW 341 Query: 357 GSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 G+DH G+V R++A+ +A+ ++ LL +++ L R G +++SKR G+ I+L V++E Sbjct: 342 GADHQGHVSRMKAMLSALGINPERLTTLLFQMITLKRGGELVRLSKRTGEMISLSEVIEE 401 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 VG+D+ RF L R +DFD K++S ENPV+YVQYA+AR SI AK+ Sbjct: 402 VGADACRFFFLSRSTESQMDFDLELAKKESAENPVYYVQYAHARICSILSLAKEKGLSYS 461 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 E E + +AE P ++E EP+ L +Y +LA+ FH + Sbjct: 462 GGDTALLGEEAELEL-------VRKMAELPEIVETVARTLEPHHLTYYAQELANAFHQFY 514 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R V ++N +L+ RL+LV A ++ L+++G+ SP M Sbjct: 515 KDCR-------VISDNTELSAARLKLVDASRIVLARTLHLMGMTSPQSM 556 >gi|93007063|ref|YP_581500.1| arginyl-tRNA synthetase [Psychrobacter cryohalolentis K5] gi|109895023|sp|Q1Q8I7|SYR_PSYCK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|92394741|gb|ABE76016.1| arginyl-tRNA synthetase [Psychrobacter cryohalolentis K5] Length = 609 Score = 519 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 186/625 (29%), Positives = 308/625 (49%), Gaps = 70/625 (11%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 +S + + + ++ + I R +D +HG ++N A+ ++ +P +AE Sbjct: 9 LTSLFDSAIAVLKNDGELPADWQNNSQITRTKDTSHGDFASNIALTAAKAAKANPRQVAE 68 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 IV + + D+ + IAG GFIN++L+ +L I +G + G K+ +E Sbjct: 69 KIVNALPENQDIRQIEIAGPGFINVFLNTEAKFAVLDDIFNLQNGFGLSKQFDGQKIQVE 128 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPT +HVGH R A G ++++L+ GY+VTREYY+NDAG Q++ LA S + RY Sbjct: 129 FVSANPTSSLHVGHGRGAAFGMSVSNLLEAIGYDVTREYYVNDAGRQMDILATSTYLRYL 188 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL--------NFPEEKWLPIVKD--- 235 + P Y G Y+ + + L +++ + N PE+ I D Sbjct: 189 E-TNGETVTFPVNGYQGDYVSDIAQTLKTQHADTYVHRFADIAENVPEDAQFEINADGEK 247 Query: 236 -------------------------------YSVQAMMKIIRDDLKALNIQHDIFISEDD 264 ++ +++ I+DDL + ++ + SE Sbjct: 248 VLLSGDKEAHIDGLIANSKALLGNGYELFLNAALSSILADIKDDLNDFGVSYECWFSERS 307 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 S I ++ L +GY+YE + F+ST GD+ DR + Sbjct: 308 I----DSEIEPVLQILEDKGYLYE----------------KDGNIWFKSTDFGDEKDRVV 347 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 +++G TYFA+D+AY K K++RGFD ++ V G+DH GYV R++A A+ +++V+ Sbjct: 348 RRANGQSTYFASDIAYHKNKFDRGFDKVVNVWGADHHGYVPRVKAALLALGIDADRLDVV 407 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L + V L+R ++MS R+G F+TLR + EVG+D+ RF + RK +DFD K Sbjct: 408 LVQFVALWRGDEKVQMSSRSGKFVTLRELRHEVGNDAARFYYVARKPEVHVDFDLELAKS 467 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 QSK+N V+Y+QYA+AR + + + +D + QE SE +LI LA Sbjct: 468 QSKDNLVYYIQYAHARVCRVLEKLETSGLSVDDAI---GAAQQELLVAPSEEELIKLLAA 524 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR----LRFVQANNRKLTMMRL 560 YP + + EP+ L YL +LA++FHG + R P A+ + RL Sbjct: 525 YPATLMRSATGYEPHILTNYLKELAALFHGWYDSNRILPVSLTSGETPSADEMAMMQARL 584 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 +L AV +I++GL ++G+ +P+ M Sbjct: 585 RLSKAVRQVISNGLGLLGLSAPSSM 609 >gi|299532760|ref|ZP_07046147.1| arginyl-tRNA synthetase [Comamonas testosteroni S44] gi|298718984|gb|EFI59954.1| arginyl-tRNA synthetase [Comamonas testosteroni S44] Length = 569 Score = 519 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 176/573 (30%), Positives = 294/573 (51%), Gaps = 47/573 (8%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP----DVDSVFIAGK 86 R E P+ AHG + AAM L++PL +P + E + ++ VD++ IAG Sbjct: 26 RAAFENPKVAAHGDFACTAAMQLAKPLKANPRALGEQLKTALEATAAFQQWVDAIEIAGP 85 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GF+N+ L P+ ++++ ++ ++G +G + +EFVSANPTGP+HVGH R A + Sbjct: 86 GFLNIRLKPAAKQEVVREVLAQAQKFGYQ-ADRGENILVEFVSANPTGPLHVGHGRQAAI 144 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQAL-------YNNDSDLPEG 199 GD +++L + G++V RE+Y NDAG QI+TL S R + ++++ L + Sbjct: 145 GDAISNLYSTQGWKVHREFYYNDAGVQIDTLTKSTQLRAKGFKPGDECWPTDSENPLAKN 204 Query: 200 YYPGVYLKHVGKELADKY-----SSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254 +Y G Y+ + K K E + + ++ ++V + DL+A N+ Sbjct: 205 FYNGDYIADIAKAFLAKETIKADDREFTANGDVEDYDNIRQFAVAYLRNEQDKDLQAFNL 264 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 + D + E + + + ++ L G YE L RST Sbjct: 265 KFDEYYLESSLY--ENGHVEATVNRLIANGKTYE----------------QDGALWLRST 306 Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA- 373 GDD DR + K+DG YTYF D+AY K++RGF ++ + G+DH G + R+ A A Sbjct: 307 DYGDDKDRVMRKTDGGYTYFVPDVAYHIQKFKRGFTKVVNIQGTDHHGTIARVRAGLQAA 366 Query: 374 -VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 V + + +L +VR+ R+G +K+SKRAG ++TLR +++ D+VRF +L RK Sbjct: 367 DVGIPEGYPDYVLHTMVRVVRNGEEVKISKRAGSYVTLRDLIEWTSKDAVRFFLLSRKPD 426 Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492 FD Q+ +NPV+YVQYA+AR +S+ R ++ L ++ E Sbjct: 427 TEYTFDVDLAVAQNNDNPVYYVQYAHARIQSVLRAWQEAGGAGLAALKDVDLSALEG--- 483 Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552 L++ LA+YP ++ A P+ + FYL DLAS +H ++ R + ++ Sbjct: 484 PQAQALMLLLAKYPEMLTAAAEGNAPHDVTFYLRDLASSYHSYYDAER-------ILVDD 536 Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 K+ + RL LV A A ++++GL ++GV +P M Sbjct: 537 EKVKLARLALVAATAQVLHNGLAVLGVSAPERM 569 >gi|313899150|ref|ZP_07832673.1| arginine--tRNA ligase [Clostridium sp. HGF2] gi|312956043|gb|EFR37688.1| arginine--tRNA ligase [Clostridium sp. HGF2] Length = 509 Score = 518 bits (1335), Expect = e-144, Method: Composition-based stats. Identities = 193/542 (35%), Positives = 291/542 (53%), Gaps = 34/542 (6%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + LK L K + IVIE P+D +HG STN AM L+R L + Sbjct: 1 MN---QIENNLKQALHNAVQKAFDTELDTASIVIEIPKDKSHGDYSTNVAMQLTRVLKNN 57 Query: 61 PLTIAELIVARI-KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 P IAE +V + K D++S IAG GFIN + + L +I++ ++ YG + G+ Sbjct: 58 PRKIAEAVVEALDKAAADIESCEIAGPGFINFTIKNTSLAQIITRVLQEQDNYGNSNDGQ 117 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G KVN+E+VSANPTG +H+GH R A GD++ LM SGY+V REYY+NDAG QI L Sbjct: 118 GLKVNVEYVSANPTGDLHLGHARGAAWGDSITRLMKASGYDVCREYYVNDAGNQIVNLGK 177 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 S+ RY++ L D DLPE Y G +K++ +A++Y + + + L K+ + Sbjct: 178 SLQARYREHL-GLDFDLPEDGYHGEDVKNIAIAIAEEYKDAYVEYSD-ANLKFFKEKGIA 235 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 + IR DL + D++ SE D + ++ L +G YE Sbjct: 236 FELDKIRRDLDNFRVHFDVWSSEQSI--RDEGKVEKALEVLHEKGLTYE----------- 282 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 L F +T GDD DR L K DGSYTY D+AY K K +RG+D ++ ++G+D Sbjct: 283 -----KDGALWFATTRFGDDKDRVLRKKDGSYTYLVPDIAYHKDKLDRGYDLLVDLLGAD 337 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H GY+ RL+A A+ ++ V + ++VRL +G +KMSKR G+ +T+R + +EVG Sbjct: 338 HHGYIPRLKASIEALGNNPDKLQVDIIQMVRLVENGEEVKMSKRLGNAVTIRELCEEVGV 397 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+VR+ + R LDFD ++QS +NPV+Y QYA+AR SI RQA +I F+L Sbjct: 398 DAVRYFFVQRAVDTHLDFDLGLARKQSNDNPVYYAQYAHARICSILRQASEIAEAKSFEL 457 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 E+ L+ ++ E+ V+ +A ++ P+K+ Y+ LA FH ++ Sbjct: 458 LT----------HEKEIALMKYINEFTNVVSDAARSRAPHKVCNYIQKLAQHFHSFYNVC 507 Query: 540 RE 541 + Sbjct: 508 KV 509 >gi|167901057|ref|ZP_02488262.1| arginyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177] Length = 594 Score = 518 bits (1334), Expect = e-144, Method: Composition-based stats. Identities = 200/615 (32%), Positives = 317/615 (51%), Gaps = 65/615 (10%) Query: 7 FSSRLKNYLKEIDCKIKVEKK---ILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 + L+N +K++ K + +L I +ERP+ AHG ++ N A+ L++PLG +P Sbjct: 9 LETLLENSVKQVVQASKGDADAAFVLPAIALERPKVAAHGDVACNVALQLAKPLGANPRQ 68 Query: 64 IAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 +AE IVA + P+ VD+ IAG GFINL L+P+ + ++ +++ G +G + Sbjct: 69 LAEQIVAALTAQPEAAGLVDAAEIAGPGFINLRLTPASKQAVIGAVLAQGRAFGASERDH 128 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 G +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA+ Sbjct: 129 GKRVLLEFVSANPTGPLHVGHGRQAALGDALANVLASQGYAVHREFYYNDAGVQIGNLAI 188 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPIV 233 S R + L D+ PE Y G Y+ + ++ A + + + L + Sbjct: 189 STQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVTGKRDVEDLEAI 247 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 + ++V + + DLKA ++ D + E + + +D L G YE Sbjct: 248 RKFAVTYLRREQDMDLKAFGVKFDQYYLESSLYT--EGRVEKTVDALIAAGMTYE----- 300 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353 L R+T GDD DR + K+DG+YTYF D+AY K+ERGF +I Sbjct: 301 -----------QEGALWLRTTDEGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKVI 349 Query: 354 YVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+R Sbjct: 350 NIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTVR 409 Query: 412 HVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 +++ G D+VRF ++ RK FD +Q+ ENP Sbjct: 410 DLIEWSGGATPGSEGSPELLDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDENP 469 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+YVQYA+AR S+ + K + D L ++ P +S+ + L+ LAEYP V+ Sbjct: 470 VYYVQYAHARICSVINEWKSRYGATDALLPGADLSPLDSK---QAMALMQKLAEYPDVLA 526 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 +A P+ +AFYL +LAS FH ++ R V + + R L+ A ++ Sbjct: 527 HAAGELAPHAVAFYLRELASEFHSFYNAER-------VLVDEQAPRTARAALLAATRQVL 579 Query: 571 NSGLNIIGVESPNEM 585 +GL ++GV +P++M Sbjct: 580 ENGLAMLGVSAPSKM 594 >gi|120609117|ref|YP_968795.1| arginyl-tRNA synthetase [Acidovorax citrulli AAC00-1] gi|166232752|sp|A1TJ83|SYR_ACIAC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|120587581|gb|ABM31021.1| arginyl-tRNA synthetase [Acidovorax citrulli AAC00-1] Length = 569 Score = 518 bits (1334), Expect = e-144, Method: Composition-based stats. Identities = 180/595 (30%), Positives = 297/595 (49%), Gaps = 49/595 (8%) Query: 11 LKNYLKEIDCKI--KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68 +K L K+ R E P+ AHG + AAM L++PL L+P + E + Sbjct: 4 VKQELLAALAGELEKLSPGSAGRAAFESPKVAAHGDFACTAAMQLAKPLKLNPRALGEQL 63 Query: 69 VARIKIDP----DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 A ++ P VD++ IAG GF+N+ L + ++I+ ++ +G +G G +V Sbjct: 64 KAALEATPAFARWVDAIEIAGPGFLNIRLKAAAKQEIVREVLSAGDRFGYQK-DNGQRVL 122 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGP+HVGH R A +GD + +L + G+ V RE+Y NDAG QI+TL S R Sbjct: 123 VEFVSANPTGPLHVGHGRQAALGDAICNLFSTQGWSVHREFYYNDAGVQIDTLTKSTQLR 182 Query: 185 YQ-----QALYNNDSDLP--EGYYPGVYLKHVGKELADK-----YSSELLNFPEEKWLPI 232 + + D + P + +Y G Y++ + + K E + + Sbjct: 183 ARGFKPGDECWPTDPENPASKTFYNGDYIQDIANDFLAKKTVKADDREFTANGDVEDYDN 242 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + DL+A N+ D + E + + ++ L +G+ YE Sbjct: 243 IRQFAVAYLRNEQDKDLQAFNLHFDQYYLESSLYT--SGRVEATVNRLVEKGHTYE---- 296 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L +ST GDD DR + K DG+YTYF D+AY K+ERGF + Sbjct: 297 ------------QDGALWLKSTDYGDDKDRVMRKKDGTYTYFVPDVAYHIAKWERGFAKV 344 Query: 353 IYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 + + G+DH G + R+ A A V + + +L +VR+ + G +K+ KRAG ++TL Sbjct: 345 VNIQGTDHHGTIARVRAGLQAADVGIPQGYPDYVLHTMVRVVKGGKEVKIGKRAGSYVTL 404 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R +++ D+VRF +L RK FD Q+ +NPV+YVQYA+AR +S+ R + Sbjct: 405 RDLIEWTSKDAVRFFLLSRKPDTEYTFDVDLAVAQNNDNPVYYVQYAHARIQSVLRAWAE 464 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 L ++ E L++ LA+YP ++ A + P+ + FYL DLA+ Sbjct: 465 AGGGDVASLKDVDLSALEG---PQAQALMLQLAKYPEMLTAAAEGEAPHDVTFYLRDLAA 521 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +H ++ R + ++ + RL LV A A ++++GL ++GV++P M Sbjct: 522 SYHSYYDAER-------ILVDDEAVKRARLALVAATAQVLHNGLKVLGVDAPARM 569 >gi|294648857|ref|ZP_06726313.1| arginine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194] gi|292825248|gb|EFF83995.1| arginine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194] Length = 599 Score = 518 bits (1334), Expect = e-144, Method: Composition-based stats. Identities = 192/629 (30%), Positives = 314/629 (49%), Gaps = 74/629 (11%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L + + + + + + + R +D +HG ++N AMI S+ G+ Sbjct: 1 MN--TAIQAALDHAVHTLQQQGVLPSDWTNTSHLTRTKDRSHGDFASNIAMIGSKAAGMK 58 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE I+A + D+ IAG GFIN +L+ +L I +YGR+ + Sbjct: 59 PRDLAEKILAALPEVADISKAEIAGPGFINFFLNADQRFAVLDQIEAQKDQYGRSQVNAA 118 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 K+ +EFVSANPT +HVGH R A G T+A+L+ +G +V REYY+NDAG Q++ LA S Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVANLLEATGAKVDREYYVNDAGRQMDILATS 178 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS--------SELLNFPEE----- 227 + RY + L P+ Y G Y+K + +E+ +K + PE+ Sbjct: 179 TYLRYLE-LTGQTLVFPKNAYQGDYVKEIAQEIINKDGNAYVRAVADIYKDVPEDVQYAE 237 Query: 228 -------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 + + ++ A++ I+DDL + Sbjct: 238 ALDAEGNKVVLSGDKEKHIDGLITNSQQQLGEGYRVFHQAALHAILDDIKDDLADFGVTF 297 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D + SE I + + L ++GY+YE + F+ST Sbjct: 298 DEWFSEASL----TEKIDEALATLDQRGYLYE----------------KEGNIWFKSTEF 337 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GD+ DR + + +G TYFA+D+AY K +RG+ ++I + GSDH GY+ R++A A+ Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDLIDIWGSDHHGYISRVKAAIDAMGY 397 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 ++ VLL + V L+R G ++MS R+G F+TLR + EVG+D+ RF + RK+ + +D Sbjct: 398 DSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD QSK+N V+Y+QYA+AR SI +AK+ + FD+ + D +E Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARVNSIVNRAKEKG--IAFDVASARQVANLLTLD-AET 514 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +++ LA YP ++ A EP+++ YL DLA++FHG ++ ++FV N L+ Sbjct: 515 EILAKLAAYPEIVIRAANVCEPHQIGNYLKDLAALFHGWYAQ----DGVKFVDEANIPLS 570 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L V ++ +GL ++GV +P M Sbjct: 571 QARLLLSINVQQVLRNGLELLGVSAPEAM 599 >gi|226952204|ref|ZP_03822668.1| arginyl-tRNA synthetase [Acinetobacter sp. ATCC 27244] gi|226837042|gb|EEH69425.1| arginyl-tRNA synthetase [Acinetobacter sp. ATCC 27244] Length = 599 Score = 518 bits (1334), Expect = e-144, Method: Composition-based stats. Identities = 192/629 (30%), Positives = 314/629 (49%), Gaps = 74/629 (11%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L + + + + + + + R +D +HG ++N AMI S+ G+ Sbjct: 1 MN--TAIQAALDHAVHTLQQQGVLPSDWTNTSHLTRTKDRSHGDFASNIAMIGSKAAGMK 58 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE I+A + D+ IAG GFIN +L+ +L I +YGR+ + Sbjct: 59 PRDLAEKILAALPEVADISKAEIAGPGFINFFLNADQRFAVLDQIEAQKDQYGRSQVNAA 118 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 K+ +EFVSANPT +HVGH R A G T+A+L+ +G +V REYY+NDAG Q++ LA S Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVANLLEATGAKVDREYYVNDAGRQMDILATS 178 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYS--------SELLNFPEE----- 227 + RY + L P+ Y G Y+K + +E+ +K + PE+ Sbjct: 179 TYLRYLE-LTGQTLVFPKNAYQGDYVKEIAQEIINKDGNTYVRAVADIYKDVPEDVQYAE 237 Query: 228 -------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 + + ++ A++ I+DDL + Sbjct: 238 ALDAEGNKVVLSGDKEKHIDGLIANSQQQLGEGYRVFHQAALHAILDDIKDDLADFGVTF 297 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 D + SE I + + L ++GY+YE + F+ST Sbjct: 298 DEWFSEASL----TEKIDEALATLDQRGYLYE----------------KEGNIWFKSTEF 337 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GD+ DR + + +G TYFA+D+AY K +RG+ ++I + GSDH GY+ R++A A+ Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDLIDIWGSDHHGYISRVKAAIDAMGY 397 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 ++ VLL + V L+R G ++MS R+G F+TLR + EVG+D+ RF + RK+ + +D Sbjct: 398 DSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD QSK+N V+Y+QYA+AR SI +AK+ + FD+ + D +E Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARVNSIVNRAKEKG--IAFDVASARQVANLLTLD-AET 514 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +++ LA YP ++ A EP+++ YL DLA++FHG ++ ++FV N L+ Sbjct: 515 EILAKLAAYPEIVIRAANVCEPHQIGNYLKDLAALFHGWYAQ----DGVKFVDEANIPLS 570 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L V ++ +GL ++GV +P M Sbjct: 571 QARLLLSINVQQVLRNGLELLGVSAPEAM 599 >gi|73667116|ref|YP_303132.1| arginyl-tRNA synthetase [Ehrlichia canis str. Jake] gi|109894989|sp|Q3YRX1|SYR_EHRCJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|72394257|gb|AAZ68534.1| arginyl-tRNA synthetase [Ehrlichia canis str. Jake] Length = 576 Score = 518 bits (1334), Expect = e-144, Method: Composition-based stats. Identities = 244/587 (41%), Positives = 359/587 (61%), Gaps = 14/587 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCK--IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58 M L + L ++ K I ++ IL ++V++ P + +G L TNAA+ILS+ + Sbjct: 1 MNLINTIKDCIVERLHVLNAKKLIILDDVILSKLVVDYPNNHDYGDLYTNAALILSKYVK 60 Query: 59 LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 DPL +AE+++ + ++ ++ + GFIN LS +++SSI + ++ IG Sbjct: 61 KDPLDVAEILLRELSNIKEISNISVVKPGFINFNLSLYVWYEVISSINMLKEDFANVNIG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G KVNIEFVSANPTGPMH+GH R A+ GD LA+L+ GY+V REYYINDAG QI+ L Sbjct: 121 NGRKVNIEFVSANPTGPMHIGHARGAIFGDVLANLLTKVGYQVVREYYINDAGTQIDVLV 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 SV+ RY++A D + G YPG+YLK +G+ L +KY ++LL + + I++D S+ Sbjct: 181 ESVYLRYKEAA-GQDIVIGSGLYPGLYLKEIGQLLYEKYGTDLLEMNSAQKMKIIRDISL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + ++ +I+ DL L I+HD+F SE + R + + + L + +Y G+L PK Sbjct: 240 KHLLDLIKQDLVLLGIKHDVFTSEAELLRNNV--VEKCVKLLEDKKLIYYGVLDQPKGTE 297 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 RKQ+LF+ST GDDVDR L K DGS+TYFA+D+AY K RGF +MI +GS Sbjct: 298 NNNW-QPRKQMLFKSTDFGDDVDRALQKVDGSWTYFASDIAYHFDKISRGFQHMILELGS 356 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GYVKRL+A A+S+ A I++ L +V +G+ +KMSKR+G+F+T++ V++EVG Sbjct: 357 DHIGYVKRLKAAVKALSDNTATIDIKLHNIVNFLNNGVQVKMSKRSGEFLTIKDVIEEVG 416 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D VRF+ML RK+ +LDFDF KV EQSK NP+FYVQYA+AR S+ R A +I D D Sbjct: 417 IDVVRFIMLTRKSDAVLDFDFVKVVEQSKNNPIFYVQYAHARVCSLMRNAPNILKIEDTD 476 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 + E+ LI LA++ VIE + EP+++ FYL ++A FH W + Sbjct: 477 FSVLS--------SKEEILLIKLLAKWSNVIELSAKTAEPHRITFYLIEVAETFHMLWGY 528 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G ++ RF+ ++ LT R+ L AVA +I+SGL I + EM Sbjct: 529 GNKDVNRRFIIDDDINLTSARIYLARAVAYVISSGLKIFSIVPLEEM 575 >gi|188996539|ref|YP_001930790.1| arginyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1] gi|188931606|gb|ACD66236.1| arginyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1] Length = 553 Score = 518 bits (1334), Expect = e-144, Method: Composition-based stats. Identities = 212/584 (36%), Positives = 333/584 (57%), Gaps = 32/584 (5%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + ++ N LK+ + + + + D+I IE P++ G LSTNAA ILS+ L P Sbjct: 1 MKQEIRDKILNILKQNNL---LFEGVEDKIKIESPKEEKFGDLSTNAAFILSKNLNKKPF 57 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +A + A + DP + V +AG GFINL++S ++ +IL+ + E+G+ K Sbjct: 58 EVANQLKALFEKDPYFEKVEVAGGGFINLFISDAFYHQILNKAIEEKDEFGKAKEKNKGK 117 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 NIE+VSANPTGP+H+GH R AVVG+ L++L + GY+V RE+YINDAG QI L +SV+ Sbjct: 118 TNIEYVSANPTGPLHLGHGRGAVVGNILSNLYDYIGYKVEREFYINDAGNQIKKLGMSVY 177 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNF-PEEKWLPIVKDYSVQAM 241 R++Q + PE Y G Y+K + KEL ++L+F EE+ + +Y+ + Sbjct: 178 ARFRQ-IEEPSYPFPEDGYHGEYIKDIAKELYHYEREKILSFLDEEEAIEFCAEYAKNFL 236 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 + I+ DLK + ++ DI+ SE + + + + L +G +YE Sbjct: 237 LDEIKKDLKLIGVEFDIWYSERHLY--EHGKVEQALKFLESKGLIYE------------- 281 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 L ++++ GD+ DR + KSDGSYTYFAAD+AY KY R +D +I V G+DH Sbjct: 282 ---KDGALWLKTSLYGDEKDRVIRKSDGSYTYFAADIAYHYDKYLRNYDFIINVWGADHH 338 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 GY RL+A A K+ INVL +LV+L+ +G +KMSKR+GDFITLR +V+EVG D+ Sbjct: 339 GYFPRLKAAIMAFGVKEDWINVLFIQLVKLFNNGEEVKMSKRSGDFITLRELVEEVGKDA 398 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 V + + + L+FD ++S ENPVFYVQYA+AR S+FR+A+ F + F Sbjct: 399 VIYFFASKDPNTHLNFDIDIALKKSNENPVFYVQYAHARISSVFREAQQRFNFNPEEDFE 458 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 ++ + + E L+ +++ P I +ATI +P+K+ Y+LAS H ++ + Sbjct: 459 ADLSLLKEDL---ERSLMKYISTIPDEIYDATIKNQPHKITNITYELASRLHKYYYYH-- 513 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +F+ N+ KL RL L+ AV +++ + I+G+ M Sbjct: 514 ----KFLIENDEKLMKARLYLLKAVRNVLRALFKIMGITPVERM 553 >gi|262281322|ref|ZP_06059103.1| arginyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202] gi|262257148|gb|EEY75885.1| arginyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202] Length = 596 Score = 518 bits (1334), Expect = e-144, Method: Composition-based stats. Identities = 184/629 (29%), Positives = 311/629 (49%), Gaps = 77/629 (12%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L + ++ + + + + + R +D +HG ++N AMI S+ G+ Sbjct: 1 MN--TAIQAALDHAVQTLQQEGVLPSDWNNTSNLTRTKDRSHGDFASNIAMIGSKAAGMK 58 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE ++A + D+ IAG GFIN +L+ IL I +GR+ Sbjct: 59 PRDLAEKVLAALPEVVDISKAEIAGPGFINFFLNADQRFAILDQIQAQKEIFGRSQANAA 118 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 K+ +EFVSANPT +HVGH R A G T+A L+ +G +V REYY+NDAG Q++ LA S Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVAKLLEATGAKVDREYYVNDAGRQMDILATS 178 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS--------------ELLNFPE 226 + RY + L N P+ Y G Y+K + + + DK E + + E Sbjct: 179 TYLRYLELLGQNLV-FPKNAYQGDYVKEIAQTIIDKDGDAYLREVADVYKDVPEDVQYAE 237 Query: 227 E------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 E + + ++ A++ I+DDL + Sbjct: 238 ELDSDGNKVVLSGDKEKHIDGLIANSQQLLGEGYRVFHQAALHAILDDIKDDLADFGVTF 297 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 + + SE + I + ++ L ++G++YE + F+ST Sbjct: 298 NQWFSEASL----SAEIDEALETLDQRGFLYE----------------KDGNIWFKSTEF 337 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GD+ DR + + +G TYFA+D+AY K +RG+ ++I + GSDH GY+ R++A A+ Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDLIDIWGSDHHGYISRVKAAIDAMGY 397 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 ++ VLL + V L+R G ++MS R+G F+TLR + EVG+D+ RF + RK+ + +D Sbjct: 398 DSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSEL 496 FD QSK+N V+Y+QYA+AR + +A D + + +E Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARICRMLEKALSTGLQFDVNAARTHAT---RLSLDAET 514 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 +++ LA YP + A A EP+++ YL +LA++FH ++ + V +++ +LT Sbjct: 515 EILAKLAAYPDAVLRAANAYEPHQVGNYLKELAALFHAWYNEHK-------VLSDDAELT 567 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL L V ++++GL ++GV +P+ M Sbjct: 568 QARLLLSINVQQVLHNGLELLGVSAPDSM 596 >gi|51246604|ref|YP_066488.1| arginyl-tRNA synthetase [Desulfotalea psychrophila LSv54] gi|81641259|sp|Q6AJJ9|SYR_DESPS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|50877641|emb|CAG37481.1| probable arginyl-tRNA synthetase [Desulfotalea psychrophila LSv54] Length = 552 Score = 518 bits (1334), Expect = e-144, Method: Composition-based stats. Identities = 175/584 (29%), Positives = 298/584 (51%), Gaps = 34/584 (5%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + L +E + + +E P+ G STN A++L+ +P Sbjct: 2 IRSQLKELLDRCFQEGVDNGSWSDRGAGKYTVELPKHEGQGDFSTNIALVLAGIEKRNPR 61 Query: 63 TIAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +A ++ ++ ++ V V IAG GF+N+ + P+ +L+ + +G +GR+ +G G Sbjct: 62 ELAGIVAEKLGLETAIVAGVEIAGPGFVNITIQPAVWHGVLAEVFSAGENFGRSQVGAGR 121 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 KV +EFVSANPTGP+ +GH R A++GD++A L+ + ++V REYY N+AG Q+ L S Sbjct: 122 KVMVEFVSANPTGPLSIGHGRQAILGDSIARLLEATNHDVFREYYYNNAGRQMRVLGEST 181 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 RY + + + PE Y G Y+ + + L D++ +L + P+ + KD + +A+ Sbjct: 182 RARYLELI-GAEFSFPEDGYQGEYIIDIAQSLVDEHGEKLKDEPD---VEPFKDQAEKAI 237 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 K I L+ + I D + +E + + I ++ L +G VYE Sbjct: 238 FKDISGTLERMGIHFDNYYNERSLY--ENGHIDSVVQELRDKGLVYE------------- 282 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 + F +T +G + DR ++KS G TY D+AY + K++R FD +I + GSDH Sbjct: 283 ---KDDAVWFETTKLGQEKDRVIIKSTGEPTYRLPDIAYHREKFKRNFDWLIDIFGSDHI 339 Query: 362 GYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 V + + A+ +++ VLL + V L RDG +KMS R +F+T+ ++D VG D Sbjct: 340 ATVPDVLSGVEALGYDASKVTVLLHQFVTLTRDGKQVKMSTRKANFVTVDELIDVVGEDV 399 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 +RF + RK L+FD QS++NPV+YVQYA+AR SI Q+ + Sbjct: 400 LRFFYMLRKADSQLEFDLDLATSQSQDNPVYYVQYAHARLCSILAQSGERGIVP----AE 455 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + + EL L+ L+ +P IE + + P+K YL + A FH +++ + Sbjct: 456 VGSSLLQRLQEPEELALLKTLSGFPAAIEGSALDLAPHKFIHYLMEFAGQFHSYYNKHK- 514 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V + +L+ RL L+ A+ + +GL+IIG+ +P M Sbjct: 515 ------VITEDLELSQARLCLIQALQLTLQNGLHIIGLTAPKSM 552 >gi|240142278|ref|YP_002966788.1| arginyl-tRNA synthetase [Methylobacterium extorquens AM1] gi|240012222|gb|ACS43447.1| arginyl-tRNA synthetase [Methylobacterium extorquens AM1] Length = 601 Score = 517 bits (1333), Expect = e-144, Method: Composition-based stats. Identities = 262/580 (45%), Positives = 362/580 (62%), Gaps = 3/580 (0%) Query: 8 SSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 R+ + ++ +RIV+E RD AHG L+T AM L + G+ P IA Sbjct: 9 RDRIAAAFGRLVASGRLPAVPPSERIVVEPTRDPAHGDLATGVAMTLGKAFGMPPSAIAA 68 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 + + DP V S +AG GF+N+ L+P + S V SG YGR + +E Sbjct: 69 ALADELAADPGVVSAAVAGPGFVNVALAPEAFGDAVRSAVSSGAAYGRRPPDGTPPMVVE 128 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGPMHVGH R AVVGD LASL+AF+G V+REYY+NDAGAQ++ LA SVF RY Sbjct: 129 FVSANPTGPMHVGHGRGAVVGDALASLLAFAGRTVSREYYVNDAGAQVDVLARSVFVRYL 188 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 +AL L EG YPG YL VG+ LAD + PE +WLP +D +V+AMM++IR Sbjct: 189 EALGEKTDALGEGLYPGEYLVPVGQALADGHGRAHAGRPEAEWLPPFRDAAVRAMMELIR 248 Query: 247 DDLKALNIQHDIFISEDDFHRG-DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 +DL+ L ++HD F SE G D + + I +L + V+ G LPPPK K + D Sbjct: 249 EDLRLLGVRHDSFFSERSLTAGPDGDLVAETIRDLRDRDLVHVGTLPPPKGKPQDDWE-D 307 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365 R+Q LFR+T+ GD+VDRPLLK+DGSYTYFAAD+AY + K+ RG ++I V+G+DH GYV+ Sbjct: 308 REQTLFRATLFGDEVDRPLLKADGSYTYFAADIAYHRSKWLRGGRHLIDVLGADHGGYVR 367 Query: 366 RLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFM 425 R+ A A + +A L ++V L RDG P++MSKR+G F+TLR VV+EVG+D+ RF Sbjct: 368 RMAAAVGAATRGEATFEAKLVQMVSLVRDGQPVRMSKRSGSFVTLREVVEEVGADAFRFT 427 Query: 426 MLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVI 485 ML+R++ ++FD +V Q+KENPV+YVQY +ARCRS RQA + P D Sbjct: 428 MLFRRSDAQMEFDLAQVVLQAKENPVYYVQYGHARCRSALRQAAEAMPSADLSPGALAQA 487 Query: 486 PQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRL 545 D E +LI +A++PR + A A EP+++AF+L++ AS H HW+ G +P L Sbjct: 488 DLGLLRDPGERELIRLVADWPRQVVLAARAGEPHRIAFFLHETASRLHAHWTRGNADPAL 547 Query: 546 RFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 RF+ N +T RL L AVA+++ +GL I+GV +P+ M Sbjct: 548 RFIVPGNVSVTRARLALAAAVAAVLAAGLGILGVGAPDRM 587 >gi|222100449|ref|YP_002535017.1| Arginyl-tRNA synthetase [Thermotoga neapolitana DSM 4359] gi|221572839|gb|ACM23651.1| Arginyl-tRNA synthetase [Thermotoga neapolitana DSM 4359] Length = 549 Score = 517 bits (1333), Expect = e-144, Method: Composition-based stats. Identities = 179/555 (32%), Positives = 282/555 (50%), Gaps = 31/555 (5%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 IE P G LSTN AM L++ L +P IA+ I + D D + + G GFIN Sbjct: 26 DFEIEVPPRKEFGDLSTNVAMKLAKQLKKNPREIAQEIAGLLIEDSVFDRIEVMGPGFIN 85 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 +LS L +++ +I+ G EYGR +GKG K+ E+ SANPTGP VGH R V+GD L Sbjct: 86 FFLSNEILHEVVKTILEQGEEYGRENVGKGLKIQFEYGSANPTGPFTVGHGRQIVIGDVL 145 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 + + GY+VTRE YINDAG QI LA S++ RY + ++ ++PEG Y G YL + Sbjct: 146 SEVFKELGYDVTREMYINDAGKQIKLLAQSLWVRYNE-IFGVKMEIPEGGYRGEYLVDIA 204 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 KELA + N E+ K+ ++ ++ +++ L+ + D++ SE + Sbjct: 205 KELASEIGDRYKNVWNEEVEEFFKNAALDRILSSMKNTLERMGSSFDVYYSEMSL--IED 262 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 + +++ L + VYE L R + ++ D+ L++SDG+ Sbjct: 263 GTVEEVLRILKEKDLVYE----------------KDGALWLRVSKFVEEDDKVLVRSDGT 306 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 YTYF D+AY KY RGF + + GSDH G++ R++A A+ NV+L + V Sbjct: 307 YTYFMTDIAYHYKKYRRGFKRVYDIWGSDHHGHIPRMKAAMKALDIPDDFFNVILHQFVT 366 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 L R G ++MS RAG+FITL ++DEVG D+ R+ + + FD K ++ +NP Sbjct: 367 LKRGGETVRMSTRAGEFITLDELLDEVGKDAARYFFAMVDPNNHMVFDIDLAKAKTMDNP 426 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+YVQYA+AR ++F A+ + + + + E L+ +L + ++ Sbjct: 427 VYYVQYAHARISNLFLNAEKKGVEFEQGK------DLDLLGNEEERTLMRNLGMFSSALK 480 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 P +L YL L+ FH ++ V N+ L+ RL L A ++ Sbjct: 481 EVAKMFAPNRLTNYLQMLSESFHVFYTKH------VIVDPENKALSNARLNLALATKIVL 534 Query: 571 NSGLNIIGVESPNEM 585 GL ++G+ +P M Sbjct: 535 KKGLKLLGISAPERM 549 >gi|19552403|ref|NP_600405.1| arginyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032] gi|62390067|ref|YP_225469.1| arginyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032] gi|1351171|sp|P35868|SYR_CORGL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|21323946|dbj|BAB98572.1| Arginyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032] gi|41325403|emb|CAF19883.1| ARGINYL-TRNA SYNTHETASE [Corynebacterium glutamicum ATCC 13032] Length = 550 Score = 517 bits (1333), Expect = e-144, Method: Composition-based stats. Identities = 186/582 (31%), Positives = 305/582 (52%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD ++ +K E+ +++ +L +++V+ERPR+ HG +TN A+ +++ +G +P Sbjct: 4 ADLATLIKETAVEVLTSRELDTSVLPEQVVVERPRNPEHGDYATNIALQVAKKVGQNPRD 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + D +DS IAG GF+N+ L+ + +I++ I+ G +G + V Sbjct: 64 LATWLAEALAADDAIDSAEIAGPGFLNIRLAAAAQGEIVAKILAQGETFGNSDHLSHLDV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++ SG +VTREYY ND G QI+ ALS+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAKVTREYYFNDHGRQIDRFALSLLA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+K + + + +K+ E L + + V+ M + Sbjct: 184 AAK------GEPTPEDGYGGEYIKEIAEAIVEKH-PEALALEPAATQELFRAEGVEMMFE 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L D++ E+ + + + L G +YE Sbjct: 237 HIKSSLHEFGTDFDVYYHENSLF--ESGAVDKAVQVLKDNGNLYEN-------------- 280 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 RST GDD DR ++KSDG Y A D+AY K+ RG + IY++G+DH GY Sbjct: 281 --EGAWWLRSTEFGDDKDRVVIKSDGDAAYIAGDIAYVADKFSRGHNLNIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA+ K + VL+ ++V L RDG ++MSKRAG +TL +V+ +G D+ R Sbjct: 339 IARLKAAAAALGYKPEGVEVLIGQMVNLLRDGKAVRMSKRAGTVVTLDDLVEAIGIDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ LD D + QS +NPV+YVQY +AR SI R+A+ + + + + Sbjct: 399 YSLIRSSVDSSLDIDLGLWESQSSDNPVYYVQYGHARLCSIARKAETLG--VTEEGADLS 456 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ + E D LI L E+P V++ A +EP+++A Y +LA FH + P Sbjct: 457 LLTHDREGD-----LIRTLGEFPAVVKAAADLREPHRIARYAEELAGTFHRFYDSCHILP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + V + + RL L A + + L+++GV +P +M Sbjct: 512 K---VDEDTAPIHTARLALAAATRQTLANALHLVGVSAPEKM 550 >gi|256825648|ref|YP_003149608.1| arginyl-tRNA synthetase [Kytococcus sedentarius DSM 20547] gi|256689041|gb|ACV06843.1| arginyl-tRNA synthetase [Kytococcus sedentarius DSM 20547] Length = 547 Score = 517 bits (1333), Expect = e-144, Method: Composition-based stats. Identities = 186/581 (32%), Positives = 308/581 (53%), Gaps = 39/581 (6%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 + + L+ ++ +I + +ERP+D HG ++N A+ L++ G++P A Sbjct: 5 QLAQAITAALEAAVADGQIAVEIPAEVRVERPKDRNHGDWASNIALQLAKKAGMNPREFA 64 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 E++ AR++ V +V IAG GF+N+ L + ++ +IV YG N G +N+ Sbjct: 65 EIVAARLREAEGVAAVDIAGPGFLNITLDAASAGELARTIVEGDATYGNNDALTGHTINL 124 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EF+SANPTG +HVGH R A +GD++ L+A SG +VT EYYINDAGAQ++ SV Sbjct: 125 EFISANPTGHLHVGHTRWAALGDSMRRLLAASGADVTAEYYINDAGAQMDKFGASVLAAA 184 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245 + PEG YPG Y++ +G A + +L P+++ + ++ M++ I Sbjct: 185 K------GEPTPEGGYPGEYVQELGAA-ALEQRPDLAELPQDEAVTAARELGYPMMLQQI 237 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 +D L A + D++ SE H + ++ L QG+VYE + Sbjct: 238 KDTLDAFGVHFDVWFSEASLH--SSGLVEKAVERLREQGHVYE----------------E 279 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365 + R+T DD DR L++++G TYFA+D AY+ K +RGF IY++G+DH GYV Sbjct: 280 GGAVWLRTTDFTDDKDRVLVRANGEPTYFASDAAYYLSKKDRGFTEKIYLLGADHHGYVN 339 Query: 366 RLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 RL+A++AA + A+ I + + +L+ + ++SKRAG+ + LR +++ +G+D++R+ Sbjct: 340 RLKAISAAAGDDPAKDIEIRIGQLISI----NGARLSKRAGNVVDLRDMLEWIGADAIRY 395 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 + L+ D ++++Q+ +NPVFYVQYA+AR ++ R A P Sbjct: 396 SLGRYPADTPLELDGEELRKQTNDNPVFYVQYAHARTANVARLAAADGVSRAEGFDPS-- 453 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 D +E L+ L ++PRV+ A +EP+++A YL LA FH + R PR Sbjct: 454 ----LLNDPTEATLLAALGDFPRVVAQAAELREPHRVARYLEGLAGAFHKWYDACRVRPR 509 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 L RL L A ++ GL+++GV +P M Sbjct: 510 D---GEEVTDLHRSRLMLNDATGVVLRRGLDLLGVSAPERM 547 >gi|268316200|ref|YP_003289919.1| arginyl-tRNA synthetase [Rhodothermus marinus DSM 4252] gi|262333734|gb|ACY47531.1| arginyl-tRNA synthetase [Rhodothermus marinus DSM 4252] Length = 564 Score = 517 bits (1333), Expect = e-144, Method: Composition-based stats. Identities = 195/603 (32%), Positives = 303/603 (50%), Gaps = 59/603 (9%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + A L+ L+ ID V + R +E+P + HG L+TNAAM L+R L P Sbjct: 1 MKAYIEEALRQVLRTID---GVPEDF--RPELEKPNNPEHGDLATNAAMQLARYLKRPPR 55 Query: 63 TIAELIVARIKIDPDV----DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 IAE I R++ P SV +AG GF+N +P YL ++L+ I+ +G YGR+ +G Sbjct: 56 QIAEEIAERLRALPLDPRRVASVEVAGPGFLNFRFAPDYLAQVLADILAAGERYGRSDLG 115 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 +G +E+VSANPTGP+ VGH R AV+GDT+A+L+ + GY VTREYY NDAG Q+ L Sbjct: 116 QGRPAIVEYVSANPTGPLTVGHGRNAVLGDTIANLLDWIGYRVTREYYYNDAGRQMRVLG 175 Query: 179 LSVFWRYQQALYNN----------------DSDLPEGYYPGVYLKHVGKELADKYSSELL 222 SV RY + N PE Y G Y+ + + L +++ L Sbjct: 176 ESVRARYLALVDPNLPTKKIQAAEGEWVEVPEPFPEDGYLGDYIIDIARMLYEQHGEALR 235 Query: 223 NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLAR 282 + + + K+ + + + + IR L L I D + +E + + I ++++ L Sbjct: 236 DVED---ITPFKEAAEKVIFEDIRRTLARLGIHMDSYFNEHTLY--ENGKIWEVVEALRA 290 Query: 283 QGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFK 342 +GY+YE + FR++ +G D D L+K G TY D+AY Sbjct: 291 KGYIYE----------------KDGAVWFRTSALGKDQDTVLVKRTGEPTYRLPDIAYHI 334 Query: 343 CKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSK 402 K+ERGF+ ++ V G+DH + + ++++V++ + V L R G P+KMS Sbjct: 335 TKFERGFERIVDVFGADHIATYPDVLRALEVLGYDVSKVDVVIYQFVTLVRGGEPVKMST 394 Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462 R ++TL ++DEVG D RF L R + L+FD +E S++NPVFY+QYA+AR Sbjct: 395 RKATYVTLDELIDEVGEDVTRFFFLMRSPNTHLEFDLDLAREASEKNPVFYLQYAHARIC 454 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 SI R+A ++ L +E LI L +P VI+ A EP+++A Sbjct: 455 SIMRKADEVG------LKESPNPDLTLLQHEAEQALIKELMRFPEVIQEAAQTYEPHRVA 508 Query: 523 FYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESP 582 YL ++A F + H R + L RL L A ++ +GL ++G+ +P Sbjct: 509 NYLREVAVAFTKFYDHCR-------IIGEPEPLAQARLALARAARLVLANGLRVLGISAP 561 Query: 583 NEM 585 M Sbjct: 562 ERM 564 >gi|300088120|ref|YP_003758642.1| arginyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527853|gb|ADJ26321.1| arginyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 557 Score = 517 bits (1333), Expect = e-144, Method: Composition-based stats. Identities = 198/590 (33%), Positives = 317/590 (53%), Gaps = 38/590 (6%) Query: 1 MYLFADFSSRLKN----YLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRP 56 M +R+ + + E ++ + +E P++ HG +++ + ++R Sbjct: 1 MNGLLAVKTRIIDIIGQAVAEAQAAGRLPAVSTPSVGVEHPQNTGHGDYASSLPLKMARA 60 Query: 57 LGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116 G+ PL IA IV I P++ SV +A GFIN LS ++ + + +++ +G YG Sbjct: 61 TGMKPLDIAAAIVEFIPEIPEIKSVAVAPPGFINFTLSDGWIIEQVEAVIKTGDTYGCID 120 Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176 G G V +E+VSANPTGP+HVGH R AV+G TLA + +GY+V +E+Y+NDAG QI + Sbjct: 121 TGAGRTVQLEYVSANPTGPIHVGHGRGAVLGSTLARALQAAGYKVQQEFYVNDAGNQIAS 180 Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236 S+ RY QAL D+++P Y G Y+ + ++A ++ N E++ L + Sbjct: 181 FKRSLRARYLQAL-GRDAEMPAEGYFGRYMTDLAGDIAAEHGDAFANLTEDEALEKLGAI 239 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 ++ M+ +IRDDL L + D + SE + +ID L + GY+ E Sbjct: 240 GLERMLGVIRDDLSGLGVNFDRWFSERSLF--ESGEYEAVIDRLKQSGYITE-------- 289 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYV 355 + F ST +G++ D +++SDG+ TYFA+D+AY K+ +RGFD +I + Sbjct: 290 --------KEGAVWFASTALGENKDNVIVRSDGTPTYFASDIAYHYDKFVKRGFDKVINI 341 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 G+DH G+V R++AV A+ ++++++ +LV L R +++SKR GD ITLR V+D Sbjct: 342 WGADHQGHVSRMKAVLQALDIDPERLHIIIAQLVTLRRGEELVRLSKRTGDMITLREVLD 401 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 EVG+D+ RF L R +DFD K+QS +NPV+YVQYA+AR SI A + D Sbjct: 402 EVGADACRFNFLARGADSQMDFDLELAKKQSADNPVYYVQYAHARICSIIELAAERGIDY 461 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 R V P E E L L P VI T EP+ LA+Y LA+ FH Sbjct: 462 HAGDVTRLVEPAELELLRKMLLL-------PEVIAQVTETLEPHHLAYYAQVLATAFHAF 514 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R V +++ L+ RL+L++A ++ L ++G+ +P++M Sbjct: 515 YKDCR-------VVSDDLCLSQARLKLMYAARRVLARTLELMGMSAPDKM 557 >gi|260222579|emb|CBA32280.1| Arginyl-tRNA synthetase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 565 Score = 517 bits (1332), Expect = e-144, Method: Composition-based stats. Identities = 180/595 (30%), Positives = 294/595 (49%), Gaps = 53/595 (8%) Query: 11 LKNYLKEIDCK--IKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68 +K+ L + + + E P+ AHG +T AAM L++PL ++P +AE + Sbjct: 4 VKHELLQALAACLENLSPGAGPKAAFESPKVAAHGDFATTAAMQLAKPLKMNPRQLAETL 63 Query: 69 VARIKIDPDVDS----VFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 + P + IAG GFIN+ L P+ ++++ ++ G +G G V Sbjct: 64 RGELLATPVYQRWVQDIEIAGPGFINIRLKPAAKQEVVREVLGQGARFGYQ-PESGKPVL 122 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGP+HVGH R A +GD + +L A GY+V RE+Y NDAG QI+TL S R Sbjct: 123 VEFVSANPTGPLHVGHGRQAALGDAICNLFATQGYKVHREFYYNDAGVQIDTLTKSTQLR 182 Query: 185 YQ-----QALYNNDSDLPE--GYYPGVYLKHVGKELADKY-----SSELLNFPEEKWLPI 232 + + + D D PE +Y G Y+ + + K E + Sbjct: 183 AKGFKPGDSCWPTDPDNPESKAFYNGDYIADIAEAFKAKASIKADDREFTANGDVDDYDN 242 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + DL+A N+ D + E + + ++ L G YE Sbjct: 243 IRQFAVAYLRNEQDKDLQAFNLHFDQYYLESSLYT--SGRVDAAVNKLVGNGKTYE---- 296 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L +ST GDD DR + K DGSYTYF D+AY K+ERGF + Sbjct: 297 ------------QDGALWLKSTDYGDDKDRVMRKKDGSYTYFVPDVAYHIAKWERGFAKV 344 Query: 353 IYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 + + G+DH G + R+ A A V + + +L +VR+ R G +K+SKRAG ++TL Sbjct: 345 VNIQGTDHHGTIARVRAGLQAADVGIPQGYPDYVLHTMVRVVRGGEEVKISKRAGSYVTL 404 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKD 470 R +++ D+VRF +L RK FD +++ +NPV+YVQYA+AR S+ Sbjct: 405 RDLIEWTSKDAVRFFLLSRKPDTEYTFDVDLAVQKNNDNPVYYVQYAHARICSVLASWG- 463 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 D+ + + + L++ LA++P ++ AT + P+ + FYL +LA+ Sbjct: 464 ------GDVAALKGVDLSALESSQAQALMLLLAKFPEMLTAATEGEAPHDVTFYLRELAA 517 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +H ++ R + ++ + + RL LV A A ++++GL ++GV +P +M Sbjct: 518 SYHSYYDAER-------ILVDDEAVKLARLALVAATAQVLHNGLAVLGVSAPQKM 565 >gi|109894991|sp|Q5FH87|SYR_EHRRG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS Length = 576 Score = 517 bits (1331), Expect = e-144, Method: Composition-based stats. Identities = 243/587 (41%), Positives = 353/587 (60%), Gaps = 14/587 (2%) Query: 1 MYLFADFSSRLKNYLK--EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58 M + + L ID + + IL +++++ P + HG L TNAA+ILS+ + Sbjct: 1 MSVACTIRRHIIEKLHVLNIDNFVVTNESILAKLIVDYPNNPDHGDLYTNAALILSKYIK 60 Query: 59 LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +P+ IA+++V ++ + + GFIN +S +I+ SI ++G G Sbjct: 61 KNPMDIAKILVDEFSSIKEISDINVVKPGFINFNISLDVWYEIIISINRLKEKFGHVNFG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G +VNIEFVSANPTGPMH+GH R A+ GD LA+L+ GYEV REYYINDAGAQ++ L Sbjct: 121 NGKRVNIEFVSANPTGPMHIGHARGAIFGDVLANLLERVGYEVVREYYINDAGAQVDVLV 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 SV+ RY++ L N + G YPG+YLK +GK L +Y S LL + I++D S+ Sbjct: 181 ESVYLRYKEVLGENIV-IGSGLYPGLYLKDIGKLLYQEYGSGLLGMDYSQRRRIIRDVSL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 +MK+I++DL L I+HDIF SE + + ++ ++ L + +Y G L PK T Sbjct: 240 MYLMKLIKEDLALLGIKHDIFTSESQLQKDNI--VQKCVELLQEKQLIYYGTLDQPKG-T 296 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 R Q+LF+ST GDDVDR L K+DGS+TYFA D+AY K RGF +MI +GS Sbjct: 297 EGINWKPRTQMLFKSTDFGDDVDRALQKADGSWTYFANDIAYHFYKISRGFQHMILELGS 356 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GYVKRL+A A+S+ A I++ L +V +G +KMSKR+G+F+T++ V+++VG Sbjct: 357 DHIGYVKRLKAAVKALSDGNATIDIKLHSIVNFLDNGAQVKMSKRSGEFLTIKDVIEKVG 416 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D VRF+ML RK+ +LDFDF KV EQSK NPVFYVQYA+AR S+ R A I L+ + Sbjct: 417 KDVVRFIMLTRKSDVVLDFDFAKVVEQSKNNPVFYVQYAHARVHSLIRNAPKI---LEIE 473 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L +V+ E+ LI LA++ ++E + EP+++ FYL ++A FH W + Sbjct: 474 LVDFSVLS-----SKEEILLIKLLAKWQDIVEISAKTAEPHRITFYLIEVAEAFHALWGY 528 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G ++ +RF+ NN LT R+ L +V +I SGL I + EM Sbjct: 529 GNKSTDMRFIVDNNINLTSARIYLAKSVGYVIASGLTIFSIVPLTEM 575 >gi|255020170|ref|ZP_05292239.1| Arginyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756] gi|254970312|gb|EET27805.1| Arginyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756] Length = 580 Score = 517 bits (1331), Expect = e-144, Method: Composition-based stats. Identities = 202/610 (33%), Positives = 312/610 (51%), Gaps = 57/610 (9%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + A +S L L+++ + ++ + + +ERP+ +HG L++N A++L++ P Sbjct: 1 MKAFVTSTLSVALQQLVESGAL-SRVPETLELERPKQASHGDLASNVALLLAKDARCKPR 59 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +AE IVA + P + IAG GFIN +L P ++++ + G +G + G+G Sbjct: 60 ELAERIVAAMPASPHIARCEIAGPGFINFFLRPEAFQEVVRLVYAQGERFGAHDFGEGET 119 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 +++EFVSANPTGP+HVGH R A G +LA+L+ F GY V EYY+NDAG Q++ LA SV+ Sbjct: 120 LHLEFVSANPTGPLHVGHGRGAAYGASLANLLRFCGYRVFCEYYVNDAGRQMDILAASVY 179 Query: 183 WRY-QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL----NFPEEKWLPI----- 232 RY + A + P Y G YL + L ++ L N P+ Sbjct: 180 LRYLENAGLDLPWPYPSNAYRGDYLLPIAAALRREFGDRLTPAARNLPDLSRFEDADAAM 239 Query: 233 -----------------VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRD 275 + + ++ IR+DL + +D + SE D I Sbjct: 240 DALIQQLKTDLGPDYAPLHRAGLDTILADIREDLAEFGVHYDGWYSERSL--MDSGAITR 297 Query: 276 IIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFA 335 +++L G+ Y + L FRST GDD DR L + +G+YTYFA Sbjct: 298 AVESLTAAGHTY----------------VQDGALWFRSTDYGDDKDRVLRRENGAYTYFA 341 Query: 336 ADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395 +D+AY K+ RGF ++ + G+DH GY+ R+ A A+ A + +LL + LYR Sbjct: 342 SDVAYHADKFARGFRQIVDMWGADHHGYIARVRASLRAMGLDDAALEILLVQFAILYRGA 401 Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455 + MS RAG+F+TLR + EVG+D+ RF + R+ + LDFD K+ S+ENPV+Y+Q Sbjct: 402 EKVSMSTRAGEFVTLRQLRAEVGNDAARFFYVLRRADQHLDFDLELAKKHSEENPVYYIQ 461 Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515 YA+AR S+FRQA++ V D EL L L +P + + A Sbjct: 462 YAHARVFSLFRQAEEQG----LSTPQAEVPDLSPLQDGRELALADLLWRFPEAVATSARA 517 Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575 +EP+++AFYL +LAS FH +++ R + R RL L AVA I +GL Sbjct: 518 REPHQIAFYLKELASAFHTYYNATR-------ILVEERDTRHARLALARAVARTIANGLA 570 Query: 576 IIGVESPNEM 585 ++GV +P M Sbjct: 571 LLGVSAPERM 580 >gi|303256429|ref|ZP_07342443.1| arginine--tRNA ligase [Burkholderiales bacterium 1_1_47] gi|302859920|gb|EFL82997.1| arginine--tRNA ligase [Burkholderiales bacterium 1_1_47] Length = 581 Score = 517 bits (1331), Expect = e-144, Method: Composition-based stats. Identities = 187/600 (31%), Positives = 300/600 (50%), Gaps = 45/600 (7%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + A +++ K + + +IV+ERP+ +HG ++ A+ ++ + P Sbjct: 1 MLASQKTKITELFKNALAAVGAPENT--KIVLERPKQQSHGDIACTVALQCAKAMKQPPR 58 Query: 63 TIAELIVARI----KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 IAE +V + ++ IAG GFINL L+P + ++ I+ G YG + Sbjct: 59 VIAEKLVEELRKETADSEMFSAIEIAGPGFINLKLAPFLKQDVVREILKEGPAYGCSDAH 118 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G + +E+VSANPTGP+H+GH R +GD L+ ++ G+ VTRE+Y NDAG QI+ LA Sbjct: 119 TGESILLEYVSANPTGPLHLGHARQGALGDVLSRMLKSQGWAVTREFYYNDAGNQIHNLA 178 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY------SSELLNFPEEKWLPI 232 +SV R + L N + PE Y G Y+ + ++ K + + L Sbjct: 179 ISVQARCYE-LQNKPFEFPEDGYKGAYVLDIAQDFLAKEPIHTFDGKVVESSGNPDDLEN 237 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ Y+V + + DL AL + D + E + + + + G YE Sbjct: 238 IRAYAVAYLREEQHKDLTALGVAFDNYYLESSLY--SDGRVAKAVQAIRNAGKTYE---- 291 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 + L F+ST GDD DR + K+DGSYTYF D+AY K+ERGF+ Sbjct: 292 ------------KDRALWFKSTDYGDDKDRVMRKADGSYTYFVPDVAYHLAKFERGFNRA 339 Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEK------KAQINVLLCELVRLYRDGMPIKMSKRAGD 406 + + GSDH G V R+ A A S K +L +++++ +DG P+KMSKR+G Sbjct: 340 LNIQGSDHHGTVARVRAGIQAASGDFGFNIPKTFPEYMLHKMLQVVKDGQPVKMSKRSGT 399 Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466 ++TL +V+ VG D+ R M+ R+ FD QS ENPV+Y+QYA+AR S+F Sbjct: 400 YVTLSDLVNWVGKDAARLFMVNRRADAEFVFDVDLALSQSDENPVYYLQYAHARICSVFA 459 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 QA++ ++ + S +EL+L+ L+++P + N T P L YL Sbjct: 460 QAQEKGIEVP-SVEEMASEDLSSLTAPTELRLMSKLSDFPTALANGTEDLSPLALVTYLK 518 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586 +LA+ FH ++ R V ++ KL RL L+ A ++ +GL I+GV +P +S Sbjct: 519 ELAADFHSFYNAER-------VLVDDEKLRNARLALLVATRQVLRNGLEILGVSAPERLS 571 >gi|262371365|ref|ZP_06064683.1| arginyl-tRNA synthetase [Acinetobacter johnsonii SH046] gi|262313702|gb|EEY94751.1| arginyl-tRNA synthetase [Acinetobacter johnsonii SH046] Length = 601 Score = 516 bits (1330), Expect = e-144, Method: Composition-based stats. Identities = 185/630 (29%), Positives = 309/630 (49%), Gaps = 74/630 (11%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M + L++ ++ + + + + + R +D +HG ++N AMI S+ G+ Sbjct: 1 MN--TAIQAALEHAVQNLQAEGVLPADWNNSSTLTRTKDRSHGDFASNIAMIASKAAGMK 58 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AE I+A + D+ IAG GFIN +L+ +L I G ++GR Sbjct: 59 PRDLAEKILAALPEVADISKAEIAGPGFINFFLNADQRFAVLDQIQAQGNQFGRTQANAA 118 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 K+ +EFVSANPT +HVGH R A G T+A+L+ +G V REYY+NDAG Q++ LA S Sbjct: 119 KKIQVEFVSANPTSSLHVGHGRGAAYGMTVATLLEATGATVDREYYVNDAGRQMDILATS 178 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELAD--------------KYSSELLNFPE 226 + RY + L P+ Y G Y+K + + + D K E + + E Sbjct: 179 TYLRYLE-LTGQALVFPKNAYQGDYVKEIAQSIIDADGYAYVRPVADVYKDVPEDVQYAE 237 Query: 227 E------------------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQH 256 E + + ++ A++ I+DDL + Sbjct: 238 ELDAEGNKVVLSGDKEKHIDGLIHNSQSLIGEAYRVFHQAALNAILDDIKDDLGEFGVTF 297 Query: 257 DIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMV 316 + + SE I + ++ L ++G++YE + F+ST Sbjct: 298 NQWFSEASL----TDKIDEALETLEQRGFLYE----------------KDGNIWFKSTEF 337 Query: 317 GDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSE 376 GD+ DR + + +G TYFA+D+AY K +RG+ ++I + GSDH GY+ R++A A+ Sbjct: 338 GDEKDRVVKRRNGQTTYFASDIAYHLNKLQRGYTDIIDIWGSDHHGYISRVKAAIDALGY 397 Query: 377 KKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLD 436 ++ VLL + V L+R G ++MS R+G F+TLR + EVG+D+ RF + RK+ + +D Sbjct: 398 DSKKLTVLLVQFVSLWRGGEMVQMSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHID 457 Query: 437 FDFCKVKEQSKENPVFYVQYAYARCRSIFR-QAKDIFPDLDFDLFPRNVIPQESEFDTSE 495 FD QSK+N V+Y+QYA+AR + +A + + FD +E Sbjct: 458 FDLDLAVSQSKDNAVYYIQYAHARVNRMVDVKAPEKG--ISFDRSKVADYDATLLVLDAE 515 Query: 496 LQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKL 555 +++ LA YP ++ A + EP+++ YL +LA++FHG ++ R + N L Sbjct: 516 TEILAKLAAYPEIVLRAANSYEPHQVGNYLKELAALFHGWYN----LDNTRIIDEQNIAL 571 Query: 556 TMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL L V ++ +GL ++GV +P M Sbjct: 572 SQARLLLSINVQQVLRNGLELLGVSAPEAM 601 >gi|331001441|ref|ZP_08325059.1| arginine--tRNA ligase [Parasutterella excrementihominis YIT 11859] gi|329568170|gb|EGG49987.1| arginine--tRNA ligase [Parasutterella excrementihominis YIT 11859] Length = 581 Score = 516 bits (1329), Expect = e-144, Method: Composition-based stats. Identities = 187/600 (31%), Positives = 300/600 (50%), Gaps = 45/600 (7%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + A +++ K + + +IV+ERP+ +HG ++ A+ ++ + P Sbjct: 1 MLASQKTKITELFKNALAAVGAPENT--KIVLERPKQQSHGDIACTVALQCAKAMKQPPR 58 Query: 63 TIAELIVARI----KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 IAE +V + ++ IAG GFINL L+P + ++ I+ G YG + Sbjct: 59 VIAEKLVEELRKETADSEMFSAIEIAGPGFINLKLAPFLKQDVVREILKEGPAYGCSDAH 118 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G + +E+VSANPTGP+H+GH R +GD L+ ++ G+ VTRE+Y NDAG QI+ LA Sbjct: 119 TGESILLEYVSANPTGPLHLGHARQGALGDVLSRMLKSQGWAVTREFYYNDAGNQIHNLA 178 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADK------YSSELLNFPEEKWLPI 232 +SV R + L N + PE Y G Y+ + ++ K + + L Sbjct: 179 ISVQARCYE-LQNKPFEFPEDGYKGAYVLDIAQDFLAKKPIHTFDGKVVESSGNPDDLEN 237 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ Y+V + + DL AL + D + E + + + + G YE Sbjct: 238 IRAYAVAYLREEQHKDLTALGVAFDNYYLESSLY--SDGRVAKAVQAIRNAGKTYE---- 291 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 + L F+ST GDD DR + K+DGSYTYF D+AY K+ERGF+ Sbjct: 292 ------------KDRALWFKSTDYGDDKDRVMRKADGSYTYFVPDVAYHLAKFERGFNRA 339 Query: 353 IYVMGSDHSGYVKRLEAVAAAVSEK------KAQINVLLCELVRLYRDGMPIKMSKRAGD 406 + + GSDH G V R+ A A S K +L +++++ +DG P+KMSKR+G Sbjct: 340 LNIQGSDHHGTVARVRAGIQAASGDFGFNIPKTFPEYMLHKMLQVVKDGQPVKMSKRSGT 399 Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466 ++TL +V+ VG D+ R M+ R+ FD QS ENPV+Y+QYA+AR S+F Sbjct: 400 YVTLSDLVNWVGKDAARLFMVNRRADAEFVFDVDLALSQSDENPVYYLQYAHARICSVFA 459 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 QA++ ++ + S +EL+L+ L+++P + N T P L YL Sbjct: 460 QAQEKGIEVP-SVEEMASEDLSSLTAPTELRLMSKLSDFPTALANGTEDLSPLALVTYLK 518 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEMS 586 +LA+ FH ++ R V ++ KL RL L+ A ++ +GL I+GV +P +S Sbjct: 519 ELAADFHSFYNAER-------VLVDDEKLRNARLALLVATRQVLRNGLEILGVSAPERLS 571 >gi|145295319|ref|YP_001138140.1| arginyl-tRNA synthetase [Corynebacterium glutamicum R] gi|166232781|sp|A4QDE1|SYR_CORGB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|140845239|dbj|BAF54238.1| hypothetical protein [Corynebacterium glutamicum R] Length = 550 Score = 516 bits (1329), Expect = e-144, Method: Composition-based stats. Identities = 185/582 (31%), Positives = 304/582 (52%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD ++ +K E+ +++ +L +++V+ERPR+ HG +TN A+ +++ +G +P Sbjct: 4 ADLATLIKETAVEVLTSRELDTSVLPEQVVVERPRNPEHGDYATNIALQVAKKVGQNPRD 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + D +DS IAG GF+N+ L+ + +I++ I+ G +G + V Sbjct: 64 LATWLAEALAADDAIDSAEIAGPGFLNIRLAAAAQGEIVAKILAQGETFGNSDHLSHLDV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++ SG +VTREYY ND G QI+ ALS+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAKVTREYYFNDHGRQIDRFALSLLA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+K + + + +K+ E L + + V+ M + Sbjct: 184 AAK------GEPTPEDGYGGEYIKEIAEAIVEKH-PEALALEPAATQELFRAEGVEMMFE 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L D++ E+ + + + L G +YE Sbjct: 237 HIKSSLHEFGTDFDVYYHENSLF--ESGAVDKAVQVLKDNGNLYEN-------------- 280 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 RST GDD DR ++KSDG Y A D+AY K+ RG + IY++G+DH GY Sbjct: 281 --EGAWWLRSTEFGDDKDRVVIKSDGDAAYIAGDIAYVADKFSRGHNLNIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA+ K + VL+ ++V L RDG ++MSKRAG +TL +V+ +G D+ R Sbjct: 339 IARLKAAAAALGYKPEGVEVLIGQMVNLLRDGKAVRMSKRAGTVVTLDDLVEAIGIDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ LD D + QS +NPV+YVQY +AR SI R+A+ + + + + Sbjct: 399 YSLIRSSVDSSLDIDLGLWESQSSDNPVYYVQYGHARLCSIARKAETLG--VTEEGADLS 456 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ + E D LI L E+P V++ A +EP+++A Y +LA FH + P Sbjct: 457 LLTHDREGD-----LIRTLGEFPAVVKAAADLREPHRIARYAEELAGTFHRFYDSCHILP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + RL L A + + L+++GV +P +M Sbjct: 512 K---ADEDTAPIHSARLALAAATRQTLANALHLVGVSAPEKM 550 >gi|283768735|ref|ZP_06341646.1| arginine--tRNA ligase [Bulleidia extructa W1219] gi|283104521|gb|EFC05894.1| arginine--tRNA ligase [Bulleidia extructa W1219] Length = 552 Score = 516 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 180/583 (30%), Positives = 304/583 (52%), Gaps = 32/583 (5%) Query: 4 FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 + + L++ I + +++E PRD + G STN AM L++ L P+ Sbjct: 1 MSQIQETIIKALEKSVNHIFQIQPEAGLLMVEEPRDRSKGDYSTNVAMRLAKVLHKAPIV 60 Query: 64 IAELIVARIKID-PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 IAE +V +K P+ S+ GFIN + L +I++S++ +G +YG N G G Sbjct: 61 IAEELVNDLKNTLPEASSIEFVKPGFINFRIKREVLFEIINSVLKAGDKYGENTSGAGKN 120 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 + +E+VSANPTG +H GH R A GD +++L+ SGY RE+YINDAG QI+ L S+ Sbjct: 121 ILVEWVSANPTGDLHCGHARNAAWGDCISNLLEKSGYNCLREFYINDAGHQIDMLGESLV 180 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 RY + L D LPE Y +K++ KE+ ++ + L ++ L K + + Sbjct: 181 ARYFEWL-GKDYPLPEDGYHAEDVKNIAKEILEEEGDKWLETDPKERLEHFKLVGKKKEL 239 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 K I DL + ++ E F+ + I ++D + + YE Sbjct: 240 KKIERDLALYRVHFQSWMPESFFYENNMERINAVLDKMDKMNLTYE-------------- 285 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 L F++T GDD DR L KSDGS +Y D+A K ERG+++++ + G+DH Sbjct: 286 --KDGALWFKATEYGDDKDRVLRKSDGSLSYLTPDIANHVYKVERGYEHLVNLWGADHHS 343 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 YV R++ A+ + ++V + ++VR+ DG +KMSKR G+ ITLR + ++VG D+ Sbjct: 344 YVTRMKLALKALGYPEGTLDVDIIQMVRMVEDGQEVKMSKRTGNAITLRELCEDVGVDAA 403 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 R+ + + + +DFDF +++ NPV+Y QYAY R SI R+ +D+ D F R Sbjct: 404 RWFFVAKDVASHMDFDFNLARKKDNNNPVYYCQYAYTRMSSILRK-EDLPAFKPTDDFSR 462 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 + EL L+ ++E+P+++ +A ++P K+ Y+ DLA +H ++ + N Sbjct: 463 -------LTNEKELYLMKLMSEFPKLVADAARLRKPNKVTEYILDLAKTYHSYYGMAKVN 515 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ +LT R+ L+ A+ + + ++GVE+ +M Sbjct: 516 ------NLDDPELTNQRIGLLKALQITLKNAFALVGVEALEQM 552 >gi|58617231|ref|YP_196430.1| arginyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel] gi|58416843|emb|CAI27956.1| Arginyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel] Length = 601 Score = 516 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 243/587 (41%), Positives = 353/587 (60%), Gaps = 14/587 (2%) Query: 1 MYLFADFSSRLKNYLK--EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58 M + + L ID + + IL +++++ P + HG L TNAA+ILS+ + Sbjct: 26 MSVACTIRRHIIEKLHVLNIDNFVVTNESILAKLIVDYPNNPDHGDLYTNAALILSKYIK 85 Query: 59 LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +P+ IA+++V ++ + + GFIN +S +I+ SI ++G G Sbjct: 86 KNPMDIAKILVDEFSSIKEISDINVVKPGFINFNISLDVWYEIIISINRLKEKFGHVNFG 145 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G +VNIEFVSANPTGPMH+GH R A+ GD LA+L+ GYEV REYYINDAGAQ++ L Sbjct: 146 NGKRVNIEFVSANPTGPMHIGHARGAIFGDVLANLLERVGYEVVREYYINDAGAQVDVLV 205 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 SV+ RY++ L N + G YPG+YLK +GK L +Y S LL + I++D S+ Sbjct: 206 ESVYLRYKEVLGENIV-IGSGLYPGLYLKDIGKLLYQEYGSGLLGMDYSQRRRIIRDVSL 264 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 +MK+I++DL L I+HDIF SE + + ++ ++ L + +Y G L PK T Sbjct: 265 MYLMKLIKEDLALLGIKHDIFTSESQLQKDNI--VQKCVELLQEKQLIYYGTLDQPKG-T 321 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 R Q+LF+ST GDDVDR L K+DGS+TYFA D+AY K RGF +MI +GS Sbjct: 322 EGINWKPRTQMLFKSTDFGDDVDRALQKADGSWTYFANDIAYHFYKISRGFQHMILELGS 381 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GYVKRL+A A+S+ A I++ L +V +G +KMSKR+G+F+T++ V+++VG Sbjct: 382 DHIGYVKRLKAAVKALSDGNATIDIKLHSIVNFLDNGAQVKMSKRSGEFLTIKDVIEKVG 441 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D VRF+ML RK+ +LDFDF KV EQSK NPVFYVQYA+AR S+ R A I L+ + Sbjct: 442 KDVVRFIMLTRKSDVVLDFDFAKVVEQSKNNPVFYVQYAHARVHSLIRNAPKI---LEIE 498 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L +V+ E+ LI LA++ ++E + EP+++ FYL ++A FH W + Sbjct: 499 LVDFSVLS-----SKEEILLIKLLAKWQDIVEISAKTAEPHRITFYLIEVAEAFHALWGY 553 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G ++ +RF+ NN LT R+ L +V +I SGL I + EM Sbjct: 554 GNKSTDMRFIVDNNINLTSARIYLAKSVGYVIASGLTIFSIVPLTEM 600 >gi|57239219|ref|YP_180355.1| arginyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] gi|58579177|ref|YP_197389.1| arginyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] gi|81352891|sp|Q5HB39|SYR_EHRRW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|57161298|emb|CAH58219.1| arginyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] gi|58417803|emb|CAI27007.1| Arginyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden] Length = 576 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 244/587 (41%), Positives = 353/587 (60%), Gaps = 14/587 (2%) Query: 1 MYLFADFSSRLKNYLK--EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLG 58 M + + L ID + + IL +++++ P + HG L TNAA+ILS+ + Sbjct: 1 MSVACTIRRHIIEKLHVLNIDNFVVTNESILAKLIVDYPNNPDHGDLYTNAALILSKYIK 60 Query: 59 LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +P+ IA+++V ++ + + GFIN +S +I+ SI ++G G Sbjct: 61 KNPMDIAKILVDEFSSIKEISDINVVKPGFINFNISLDVWYEIIISINRLKEKFGHVNFG 120 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G +VNIEFVSANPTGPMH+GH R A+ GD LA+L+ GYEV REYYINDAGAQI+ L Sbjct: 121 NGKRVNIEFVSANPTGPMHIGHARGAIFGDVLANLLERVGYEVVREYYINDAGAQIDVLV 180 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 SV+ RY++ L N + G YPG+YLK +GK L +Y S LL + I++D S+ Sbjct: 181 ESVYLRYKEVLGENIV-IGSGLYPGLYLKDIGKLLYQEYDSGLLGMDYSQRRRIIRDVSL 239 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 +MK+I++DL L I+HDIF SE + + ++ ++ L + +Y G L PK T Sbjct: 240 MYLMKLIKEDLALLGIKHDIFTSESQLQKDNI--VQKCVELLQEKQLIYYGTLDQPKG-T 296 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 R Q+LF+ST GDDVDR L K+DGS+TYFA D+AY K RGF +MI +GS Sbjct: 297 EGINWKPRTQMLFKSTDFGDDVDRALQKADGSWTYFANDIAYHFYKISRGFQHMILELGS 356 Query: 359 DHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVG 418 DH GYVKRL+A A+S+ A I++ L +V +G +KMSKR+G+F+T++ V+++VG Sbjct: 357 DHIGYVKRLKAAVKALSDGNATIDIKLHSIVNFLDNGAQVKMSKRSGEFLTIKDVIEKVG 416 Query: 419 SDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFD 478 D VRF+ML RK+ +LDFDF KV EQSK NPVFYVQYA+AR S+ R A I L+ + Sbjct: 417 KDVVRFIMLTRKSDVVLDFDFAKVVEQSKNNPVFYVQYAHARVHSLIRNAPKI---LEIE 473 Query: 479 LFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSH 538 L +V+ E+ LI LA++ ++E + EP+++ FYL ++A FH W + Sbjct: 474 LVDFSVLS-----SKEEILLIKLLAKWQDIVEISAKTAEPHRITFYLIEIAEAFHALWGY 528 Query: 539 GRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 G ++ +RF+ NN LT R+ L +V +I SGL I + EM Sbjct: 529 GNKSTDMRFIVDNNINLTSARIYLAKSVGYVIASGLTIFSIVPLTEM 575 >gi|325963846|ref|YP_004241752.1| arginyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3] gi|323469933|gb|ADX73618.1| arginyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3] Length = 554 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 197/584 (33%), Positives = 310/584 (53%), Gaps = 38/584 (6%) Query: 6 DFSSRLKNYLKEIDCKIKVE---KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + S + LK+ + + D + +ERP++ HG +TN A+ L++ G +P Sbjct: 5 ELSLAISACLKDAVAAGDIALPASAVPDEVRVERPKNRDHGDWATNIALQLAKQAGTNPR 64 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 A ++ R+K V +V IAG GF+N+ + + + +IV +G EYG N G Sbjct: 65 EFATVLSTRLKAIEGVAAVDIAGPGFLNITVDAAAAGALAKAIVEAGKEYGTNSALAGHT 124 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VN+EFVSANPTGP+H+GH R A +GD++A ++ SG +VT EYYINDAG Q+N A SV+ Sbjct: 125 VNMEFVSANPTGPLHIGHTRWAALGDSIARVLRASGADVTAEYYINDAGTQMNVFAHSVY 184 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 R +P+G YPG Y+ +G E+ ++ + E +P+++ + QA M Sbjct: 185 NRLHGL------PVPDGGYPGQYIADLGHEVLAEHPD-IRELTEVAAVPVIRAAAYQAQM 237 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 K I+ L ++ D+F SE + H D I + L QG+V++ Sbjct: 238 KDIKSTLADFGVEFDVFFSEQELH--DAGAIESAVARLREQGHVFD-------------- 281 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 D + R+T GDD DR L++++G TYFAAD AY+ K +RGF IY++G+DH G Sbjct: 282 --DGGAVWLRTTDFGDDKDRVLIRANGEPTYFAADAAYYLSKKDRGFTEKIYLLGADHHG 339 Query: 363 YVKRLEAVAAAVSEKK-AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 Y+ RL+A+AAA + I VL+ +LV + K+SKRAG+ I L+ ++D +G D+ Sbjct: 340 YINRLKAIAAAAGDDPEVHIEVLIGQLVSV----NGAKLSKRAGNIIELKDLIDWLGKDA 395 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 VR+ + L D +K+ S ENPVFYVQYA+AR R R A D D Sbjct: 396 VRYSLARFPADSPLTLDPELLKKHSNENPVFYVQYAHARSRGAARNAVAAGVDRQVD--G 453 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 ++ +E +L+ +L YP ++ A +EP+++A +L +A +H + R Sbjct: 454 KDSFDASLLDHATENELLSYLGSYPSIVAKAAELREPHRVARHLEVIAGAYHRWYDACRI 513 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P + RL L A + ++ +GL+++GV +P M Sbjct: 514 APMG---DEAVTDVNRTRLWLNDATSQVLANGLDLLGVSAPERM 554 >gi|319764740|ref|YP_004128677.1| arginyl-tRNA synthetase [Alicycliphilus denitrificans BC] gi|330826956|ref|YP_004390259.1| arginyl-tRNA synthetase [Alicycliphilus denitrificans K601] gi|317119301|gb|ADV01790.1| arginyl-tRNA synthetase [Alicycliphilus denitrificans BC] gi|329312328|gb|AEB86743.1| arginyl-tRNA synthetase [Alicycliphilus denitrificans K601] Length = 567 Score = 515 bits (1326), Expect = e-143, Method: Composition-based stats. Identities = 181/593 (30%), Positives = 296/593 (49%), Gaps = 50/593 (8%) Query: 12 KNYLKEIDCKIK-VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 + L + +++ + R E P+ AHG L+ AAM L++PL +P + E + A Sbjct: 6 QELLAALAGELERLSPGASSRAAFESPKVAAHGDLACTAAMQLAKPLKQNPRALGEQLKA 65 Query: 71 RIKIDP----DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 ++ P VD + IAG GF+N+ L + ++++ ++ G +G +G KV +E Sbjct: 66 ALEATPAFAQWVDVIEIAGPGFLNIRLKNAAKQQVVREVLAQGTRFGMQPA-RGEKVLVE 124 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+HVGH R A +GD +++L A G++V RE+Y NDAG QI+TL S R + Sbjct: 125 FVSANPTGPLHVGHGRQAAIGDAISNLYATQGWQVHREFYYNDAGVQIDTLTKSTQLRAK 184 Query: 187 QALYNND-------SDLPEGYYPGVYLKHVGKELADKY-----SSELLNFPEEKWLPIVK 234 +D + L + +Y G Y++ + K + + ++ Sbjct: 185 GFKPGDDCWPTDADNPLAKNFYNGDYIQDIANAFLAKATVKADDRAFTANGDVEDYDNIR 244 Query: 235 DYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPP 294 ++V + DL+A N++ D + E + + + L G YE Sbjct: 245 QFAVAYLRNEQDKDLQAFNLRFDEYYLESSLYAN--GHVDATVARLIANGKTYE------ 296 Query: 295 KSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIY 354 L RST GDD DR + K DGSYTYF D+AY K++RGF ++ Sbjct: 297 ----------QDGALWLRSTDYGDDKDRVMRKQDGSYTYFVPDVAYHIQKWQRGFRKVVN 346 Query: 355 VMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRH 412 + G+DH G + R+ A A V + + +L +VR+ R G +K+SKRAG ++TLR Sbjct: 347 IQGTDHHGTIARVRAGLQAADVGIPQGYPDYVLHTMVRVVRGGEEVKISKRAGSYVTLRD 406 Query: 413 VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF 472 +++ D+VRF +L RK FD Q+ +NPV+YVQYA+AR S+ R ++ Sbjct: 407 LIEWTSKDAVRFFLLSRKPDTEYTFDVDLAVAQNNDNPVYYVQYAHARICSVLRGWRE-- 464 Query: 473 PDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVF 532 D D+ + L++ LA+YP ++ A P+ + FYL DLA+ + Sbjct: 465 ---DCDVGALTDVDLSPLEGPQAQALMLLLAKYPEMLAAAAAGNAPHDVTFYLRDLAAAY 521 Query: 533 HGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 H ++ R + ++ + + RL LV A A ++++GL ++GV +P M Sbjct: 522 HSYYDAER-------ILVDDEPVRLARLALVAATAQVLHNGLAVLGVSAPARM 567 >gi|433534|emb|CAA79710.1| arginyl-tRNA synthetase [Corynebacterium glutamicum] Length = 550 Score = 515 bits (1326), Expect = e-143, Method: Composition-based stats. Identities = 185/582 (31%), Positives = 303/582 (52%), Gaps = 36/582 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL-DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 AD ++ +K E+ +++ +L +++V+ERPR+ HG +TN A+ +++ +G +P Sbjct: 4 ADLATLIKETAVEVLTSRELDTSVLPEQVVVERPRNPEHGDYATNIALQVAKKVGQNPRD 63 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A + + D +DS IAG GF+N+ L+ + +I++ I+ G +G + V Sbjct: 64 LATWLAEALAADDAIDSAEIAGPGFLNIRLAAAAQGEIVAKILAQGETFGNSDHLSHLDV 123 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 N+EFVSANPTGP+H+G R A VGD+L ++ SG +VTREYY ND G QI+ ALS+ Sbjct: 124 NLEFVSANPTGPIHLGGTRWAAVGDSLGRVLEASGAKVTREYYFNDHGRQIDRFALSLLA 183 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMK 243 + PE Y G Y+K + + + +K+ E L + + V+ M + Sbjct: 184 AAK------GEPTPEDGYGGEYIKEIAEAIVEKH-PEALALEPAATQELFRAEGVEMMFE 236 Query: 244 IIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCD 303 I+ L D++ E+ + + + L G +YE Sbjct: 237 HIKSSLHEFGTDFDVYYHENSLF--ESGAVDKAVQVLKDNGNLYEN-------------- 280 Query: 304 MDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGY 363 RST GDD DR ++KSDG Y A D+AY K+ RG + IY++G+DH GY Sbjct: 281 --EGAWWLRSTEFGDDKDRVVIKSDGDAAYIAGDIAYVADKFSRGHNLNIYMLGADHHGY 338 Query: 364 VKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 + RL+A AAA+ K + VL+ ++V L RDG ++MSKRAG +TL +V+ +G D+ R Sbjct: 339 IARLKAAAAALGYKPEDVEVLIGQMVNLLRDGKAVRMSKRAGTVVTLDDLVEAIGIDAAR 398 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + ++ LD D + QS +NPV+YVQY +AR SI R+A+ + + + + Sbjct: 399 YSLIRSSVDSSLDMDLGLWESQSSDNPVYYVQYGHARLCSIARKAETLG--VTEEGADLS 456 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 ++ + E D LI L E+P V++ A +EP+++A Y +LA FH + P Sbjct: 457 LLTHDREGD-----LIRTLGEFPAVVKAAADLREPHRIARYAEELAGTFHRFYDSCHILP 511 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + + RL L A + + L ++GV +P +M Sbjct: 512 K---ADEDTAPIHTARLALAAATRQTLANALRLVGVSAPEKM 550 >gi|170698554|ref|ZP_02889624.1| arginyl-tRNA synthetase [Burkholderia ambifaria IOP40-10] gi|170136559|gb|EDT04817.1| arginyl-tRNA synthetase [Burkholderia ambifaria IOP40-10] Length = 593 Score = 514 bits (1325), Expect = e-143, Method: Composition-based stats. Identities = 198/616 (32%), Positives = 307/616 (49%), Gaps = 67/616 (10%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L AD +++ + LK D + I +ERP+ AHG ++ N AM L++PLG +P Sbjct: 12 LLADSVTQVAHALKGADSAF-----VAPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66 Query: 63 TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +AE IVA + P VD+ IAG GFINL L+ + + +++++ G +G + Sbjct: 67 QLAEKIVAALTAQPAAQGLVDAAEIAGPGFINLRLTAAAKQAVIAAVFEQGRAFGTSDRE 126 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA Sbjct: 127 KGKQVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPI 232 +S R + L D+ PE Y G Y+ + ++ A K + + L Sbjct: 187 ISTQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNRETVAAKDGEPVTGAGDIDDLDA 245 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + DL+A ++ D + E + + +D L + G YE Sbjct: 246 IRKFAVAYLRHEQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALVKAGMTYE---- 299 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L R+T GDD DR + KSDG+YTYF D+AY K+ERGF + Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTQV 347 Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 I + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+ Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKLSKRAGSYVTV 407 Query: 411 RHVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 R +++ G D+VRF ++ RK FD +Q+ EN Sbjct: 408 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 PV+YVQYA+AR S+ ++ + D+ + L+ LAEYP ++ Sbjct: 468 PVYYVQYAHARICSVLN---ELKSRYNVDVAQLPGADLSQLTSPQAVSLMQKLAEYPDML 524 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 +A P+ +AFYL DLA FH ++ R V ++ R L+ A + Sbjct: 525 THAAKELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577 Query: 570 INSGLNIIGVESPNEM 585 + +GL ++GV +P +M Sbjct: 578 LENGLAVLGVSAPAKM 593 >gi|169334677|ref|ZP_02861870.1| hypothetical protein ANASTE_01080 [Anaerofustis stercorihominis DSM 17244] gi|169257415|gb|EDS71381.1| hypothetical protein ANASTE_01080 [Anaerofustis stercorihominis DSM 17244] Length = 557 Score = 514 bits (1325), Expect = e-143, Method: Composition-based stats. Identities = 185/585 (31%), Positives = 301/585 (51%), Gaps = 40/585 (6%) Query: 5 ADFSSRLKNYLKEIDCKIKVE--KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + N + + + +E K+ + +I +E PR+ G S N AM L++ +P Sbjct: 9 KEIIKLVDNAIDKCIEQGLLEIKKEDVPQIRVEVPREEKFGDFSVNTAMQLAKAARCNPR 68 Query: 63 TIAELIVARIKI-DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 IAE I+ I + V + IAG GFIN L +L L ++ +YG+ + Sbjct: 69 IIAENIIKNIDTKNSYVKDISIAGAGFINFTLDNKWLYDELKKVITLKDKYGKIVEENPK 128 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 +VN+E+VSANPTGP+H+G+ R +GD +++++ ++G +VT+E+Y+NDAG QI S+ Sbjct: 129 RVNVEYVSANPTGPLHIGNARGGAIGDVISNILTWAGCDVTKEFYLNDAGNQIIKFGESL 188 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 RY Q L D + PE Y G + + K ++ +LLN EE+ + +YS+ Sbjct: 189 EARYLQEL-GKDVEFPEDGYKGEDITDLAKSYIEENGDKLLNVSEEERQSELVEYSLDKN 247 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 + + +DLK I +D+F SE H + I D+I + G VY+ Sbjct: 248 VSNMVNDLKDYGIDYDVFFSERTLH--NSGAIDDVISKMKNDGSVYK------------- 292 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYVMGSDH 360 L F+ T G + D L++ +G TY+AAD+AY K +R FD I V G+DH Sbjct: 293 ---KEGALWFKGTEYGLEKDEVLIRQNGVPTYYAADIAYHYDKLVKRNFDYAINVWGADH 349 Query: 361 SGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 G+V RL+ A+ + +++V+L +LV L ++ ++MSKR G+ TL +V EVG D Sbjct: 350 HGHVARLKKAMVALGVNEDRLDVILMQLVHLVKNNEALRMSKRKGNIYTLSDLVGEVGKD 409 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 + RF+ + K + +DFD +QS +NPVFYVQYA+AR SI R + +L Sbjct: 410 AARFVFNYNKPNTHMDFDLDLAIKQSSDNPVFYVQYAHARICSIIRNIGKEVKAENLELL 469 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 + E+ L+ ++ + I A+ +P K+ Y DLA FH ++ R Sbjct: 470 NKK----------EEINLLKVISNFSDEILKASNDLDPSKITKYAMDLAGSFHSFYNAHR 519 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V ++ L RL LV A +++ + L+I+GV + +M Sbjct: 520 -------VIVDDEDLMNARLALVTATRNVLKNTLDILGVSALEKM 557 >gi|300112762|ref|YP_003759337.1| arginyl-tRNA synthetase [Nitrosococcus watsonii C-113] gi|299538699|gb|ADJ27016.1| arginyl-tRNA synthetase [Nitrosococcus watsonii C-113] Length = 585 Score = 514 bits (1325), Expect = e-143, Method: Composition-based stats. Identities = 194/618 (31%), Positives = 303/618 (49%), Gaps = 80/618 (12%) Query: 9 SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68 + + L + + + DRI ++R RD +HG ++N M+L++ P +A+LI Sbjct: 7 NLIAAALSSLQQEGILSSWDKDRIQVQRTRDKSHGDFASNIPMVLAKEARQKPQKLADLI 66 Query: 69 VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128 VAR+ P V V IAG GFIN L+ + ++S I+ +GR G+G V++EFV Sbjct: 67 VARLPEHPWVKKVDIAGPGFINFTLALPAFQAVVSQILEQKEFFGRCQTGQGKTVHLEFV 126 Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188 SANPTGP+HVGH R A GD LA L+ GY+V REYY+NDAG Q++ LA+SV+ RY + Sbjct: 127 SANPTGPLHVGHGRGAAYGDALARLLTAVGYQVHREYYVNDAGRQMDILAVSVWLRYLE- 185 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSS---------------ELLNFPEEKWLP-- 231 L P Y G Y+ ++G+ L + + EK+L Sbjct: 186 LCGETLPFPSNGYQGEYVCNIGQYLKIEEGDLPHHSAKEILAGLPADAPEGDREKYLDAL 245 Query: 232 --------------IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277 V + ++ ++ IR+DL N+ +D + SE + ++ I Sbjct: 246 ILKMKNLLGKNNYRKVFEQALNTILAGIREDLAKFNVTYDEWFSERQLTKM--GMVKIAI 303 Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337 + L GY+Y+ FR+T GD+ DR +++ +G TYFA+D Sbjct: 304 ERLKAAGYLYQ----------------KDGAWWFRATNFGDEKDRVVIRENGQPTYFASD 347 Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397 +AY K ERG+ +I V G+DH GY+ R++A A+ Q +V L + LYR Sbjct: 348 IAYHLNKLERGYHKIIDVWGADHHGYIPRIKASLQALGADLQQFDVRLVQFAILYRGKEK 407 Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457 I+MS R+G+F+TLR + EVG D+ RF + R + +DFD K QS ENPV+YVQYA Sbjct: 408 IQMSTRSGEFVTLRELCQEVGKDAARFFYVMRGAEQHMDFDLELAKSQSNENPVYYVQYA 467 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 +AR S+F Q K + + +++ ++ E+ L+ L+ Y V+E A Sbjct: 468 HARICSVFHQLKAREFVWNSEQGRKHLG---KLNESHEVTLLDRLSCYSEVVEGAATQSA 524 Query: 518 PY----------KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 P+ + FH +++ + +L RL L+ A Sbjct: 525 PHLLAYYLLDLAR----------DFHTYYNAHTF-------LVDTPELRDARLALIAATR 567 Query: 568 SIINSGLNIIGVESPNEM 585 +I +GL ++GV +P M Sbjct: 568 QVIKNGLTLLGVSAPESM 585 >gi|328955732|ref|YP_004373065.1| arginyl-tRNA synthetase [Coriobacterium glomerans PW2] gi|328456056|gb|AEB07250.1| arginyl-tRNA synthetase [Coriobacterium glomerans PW2] Length = 617 Score = 514 bits (1324), Expect = e-143, Method: Composition-based stats. Identities = 186/633 (29%), Positives = 304/633 (48%), Gaps = 74/633 (11%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + ++ + + L+ +ERP D ++G ++ A+ ++ G+ P AE Sbjct: 5 IENLVREAVIAAQSAGDLPAFALEDCGVERPADTSNGEWTSTVALRSAKAAGIAPRAFAE 64 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 +A ++IDP ++ V IAG GFIN YLS + + G ++ R+ G G ++ +E Sbjct: 65 AAIAHMRIDPSIERVEIAGPGFINFYLSTGERNAVFARAREQGADFARSSAGAGIRLQVE 124 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANP GP+H+GH R A +GD+L+ +M +GY+V REYY+ND G Q++ S+ RY Sbjct: 125 FVSANPVGPLHIGHGRWAALGDSLSRVMEHAGYDVEREYYVNDHGNQMDVFGSSISMRYM 184 Query: 187 QA-------------------------LYNNDSDLPEGY--------------YPGVYLK 207 Q + ++ + PE + Y G Y+ Sbjct: 185 QLVDIVNKRGVGLETAVQLLSADRDAYIRDDSDEHPELHPYSDRFIDALGANSYGGEYII 244 Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 +L + E + + ++ + M+ IRD + D++ SE + Sbjct: 245 ETAADLFRRDGDAWAGASESERMSAFREQGHRKMLDEIRDLCHDVRCDFDVWFSERSLYE 304 Query: 268 G-------DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 S + L GY+YE + FRST +GDD Sbjct: 305 KATTGPDAGTSAVDRAFARLREMGYIYESA----------------GAVWFRSTDLGDDK 348 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR L+K++G YTYFA+D+AY K++R D+ I + GSDH GY+ R+ A A+ + Sbjct: 349 DRVLVKANGDYTYFASDVAYHWDKFQR-VDHAIDIWGSDHHGYIGRVRAACDALGY-PGR 406 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 VLL +LV L R G P++MSKR G +T R +VDEVG+D+ R+ ++ R ++ +DFD Sbjct: 407 FEVLLGQLVNLLRSGKPVRMSKRKGTMVTFRELVDEVGADATRYTLISRSANQTIDFDID 466 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAKDI--------FPDLDFDLFPRNVIPQESEFD 492 VKE+S +NPV+YVQYA+AR SI R+A + D + + D Sbjct: 467 AVKERSMDNPVYYVQYAHARICSILRRAAGVDDKQAALLGMDAVAARSIGDRVDYALLTD 526 Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552 +E L L+E ++ + + P++L + +LA+ FH + + P + + Sbjct: 527 PTEFALSRKLSELEELVVSCARDRAPFRLTHFAEELAADFHSFYGACQVLPS--ETRPVD 584 Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +L+ RL AV S+++ L +IGV +P M Sbjct: 585 AELSRARLAACDAVRSVLSLVLGLIGVSAPESM 617 >gi|163840172|ref|YP_001624577.1| arginyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209] gi|189083543|sp|A9WNA7|SYR_RENSM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|162953648|gb|ABY23163.1| arginyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209] Length = 549 Score = 514 bits (1324), Expect = e-143, Method: Composition-based stats. Identities = 186/585 (31%), Positives = 309/585 (52%), Gaps = 43/585 (7%) Query: 5 ADFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 + S L LK ++ + + + +ERP++ HG +TN A+ L++P GL+P Sbjct: 4 DELSVALTACLKAAVEAGELVVPTEAVPAEVRVERPKNRDHGDWATNIALQLAKPAGLNP 63 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +AE++ +R++ V +V IAG GF+N+ L + + +IV +G +YG N G Sbjct: 64 RAVAEILKSRLEAIEGVAAVDIAGPGFLNITLDAAAAGALAKNIVHAGSQYGENQALTGQ 123 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 +N+EFVSANPTGP+H+ H R A VGD++A L+ SG VT EYYINDAG+Q+N SV Sbjct: 124 VINVEFVSANPTGPLHLAHTRWAAVGDSVARLLKASGATVTSEYYINDAGSQMNNFGASV 183 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 + PEG YPG Y+ + +++ + + +E LP+V+ + A Sbjct: 184 LAAIK------GEPTPEGGYPGAYITELAQQVVRDH-PYVTELTDEAALPVVRAAAYLAQ 236 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQK 301 + I++ L + D+F SE + H + +D L QG+V+ Sbjct: 237 LADIKETLNDFGVHFDVFFSEQELH--STGAVEKAVDRLRGQGHVFY------------- 281 Query: 302 CDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHS 361 + R+T DD DR L++++G TYFAAD AY+ K +RGF IY++G+DH Sbjct: 282 ---QDGAIWLRTTDFTDDKDRVLIRANGEPTYFAADAAYYLSKKDRGFVEKIYLLGADHH 338 Query: 362 GYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSD 420 GY+ RL+A+AA + A+ I VL+ ++V + ++SKRAG+ + LR +++ +G+D Sbjct: 339 GYIGRLKAIAACAGDDPARNIEVLIGQMVSV----NGARLSKRAGNIVELRDLLNWLGAD 394 Query: 421 SVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLF 480 ++R+ + L + ++++ S +NPVFYVQYA+AR +++ R A+ D Sbjct: 395 ALRYSLGRSPADSPLALEPEQLQKASNDNPVFYVQYAHARTKAVDRNAEAAGVD------ 448 Query: 481 PRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 R+ +E L+ L +P V+ A +EP+++A +L +A +H + R Sbjct: 449 -RSAFEASLLTHPTESNLLAQLGAFPSVVAEAAKFREPHRVARHLEVVAGTYHRWYDACR 507 Query: 541 ENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P F L RL L A ++ +GL+++GV +P M Sbjct: 508 VTP---FAGEEITDLNRTRLWLNDATGQVLANGLDLLGVSAPERM 549 >gi|107023852|ref|YP_622179.1| arginyl-tRNA synthetase [Burkholderia cenocepacia AU 1054] gi|116690937|ref|YP_836560.1| arginyl-tRNA synthetase [Burkholderia cenocepacia HI2424] gi|170734267|ref|YP_001766214.1| arginyl-tRNA synthetase [Burkholderia cenocepacia MC0-3] gi|254247060|ref|ZP_04940381.1| Arginyl-tRNA synthetase, class Ic [Burkholderia cenocepacia PC184] gi|123071911|sp|Q1BT49|SYR_BURCA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|166232763|sp|A0KAZ0|SYR_BURCH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|238688616|sp|B1JZC6|SYR_BURCC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|105894041|gb|ABF77206.1| arginyl-tRNA synthetase [Burkholderia cenocepacia AU 1054] gi|116649026|gb|ABK09667.1| arginyl-tRNA synthetase [Burkholderia cenocepacia HI2424] gi|124871836|gb|EAY63552.1| Arginyl-tRNA synthetase, class Ic [Burkholderia cenocepacia PC184] gi|169817509|gb|ACA92092.1| arginyl-tRNA synthetase [Burkholderia cenocepacia MC0-3] Length = 593 Score = 514 bits (1323), Expect = e-143, Method: Composition-based stats. Identities = 197/616 (31%), Positives = 306/616 (49%), Gaps = 67/616 (10%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L AD ++ + LK D + I +ERP+ AHG ++ N AM L++PLG +P Sbjct: 12 LLADSVKQVAHALKGADAAF-----VAPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66 Query: 63 TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +AE IVA + P V++ IAG GFINL LS + + +++++ G +G + Sbjct: 67 QLAEQIVAALTAQPAAQGLVEAAEIAGPGFINLRLSAAAKQAVIAAVFEQGRAFGTSDRE 126 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA Sbjct: 127 KGKQVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPI 232 +S R + L D+ PE Y G Y+ + ++ A + + + L Sbjct: 187 ISTQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVKGTGDVEDLDA 245 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + + DL+A ++ D + E + + +D L + G YE Sbjct: 246 IRKFAVTYLRREQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALVKAGMTYE---- 299 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L R+T GDD DR + KSDG+YTYF D+AY K+ERGF + Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTKV 347 Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 I + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+ Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTV 407 Query: 411 RHVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 R +++ G D+VRF ++ RK FD +Q+ EN Sbjct: 408 RDLIEWSGGAAAGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 PV+YVQYA+AR S+ ++ + D+ L+ LAEYP ++ Sbjct: 468 PVYYVQYAHARICSVLN---ELKSRYNVDVAQLPGADLSQLTSAQAASLMQKLAEYPDML 524 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 +A P+ +AFYL DLA FH ++ R V ++ R L+ A + Sbjct: 525 THAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577 Query: 570 INSGLNIIGVESPNEM 585 + +GL ++GV +P +M Sbjct: 578 LENGLAVLGVSAPAKM 593 >gi|220913103|ref|YP_002488412.1| arginyl-tRNA synthetase [Arthrobacter chlorophenolicus A6] gi|254782940|sp|B8HB09|SYR_ARTCA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|219859981|gb|ACL40323.1| arginyl-tRNA synthetase [Arthrobacter chlorophenolicus A6] Length = 554 Score = 513 bits (1322), Expect = e-143, Method: Composition-based stats. Identities = 196/584 (33%), Positives = 311/584 (53%), Gaps = 38/584 (6%) Query: 6 DFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + S + LK+ ++ E + + + +ERP++ HG +TN A+ L++ G +P Sbjct: 5 ELSLAISACLKDAVAAGEIALAESAVPEDVRVERPKNRDHGDWATNIALQLAKQAGTNPR 64 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 A ++ AR+K V +V IAG GF+N+ + + + +IV +G +YG N G Sbjct: 65 EFATILSARLKTISGVSAVDIAGPGFLNITVDAAAAGALAKAIVEAGTQYGTNTALAGHT 124 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VN+EFVSANPTGP+H+GH R A +GD +A ++ SG +VT EYYINDAG+Q+NT A SV+ Sbjct: 125 VNMEFVSANPTGPLHIGHTRWAALGDAIARVLRASGADVTAEYYINDAGSQMNTFANSVY 184 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 R +PEG YPG Y+ +G E+ + + E LP+++ + +A M Sbjct: 185 SRLHGL------PVPEGGYPGQYIADLGHEVLTAHPD-IRELTEVAALPVIRAAAYEAQM 237 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 K I+ L + D+F SE + H D I + L QG+V++ Sbjct: 238 KDIKATLADFGVAFDVFFSEQELH--DAGAIESAVARLREQGHVFD-------------- 281 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 D + R+T GDD DR +++++G TYFAAD AY+ K +RG+ IY++G+DH G Sbjct: 282 --DGGAVWLRTTDFGDDKDRVMIRANGEPTYFAADAAYYLSKKDRGYTEKIYLLGADHHG 339 Query: 363 YVKRLEAVAAAVSEKK-AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 Y+ RL+A+AAA + I VL+ +LV + K+SKRAG+ I L+ ++D +G D+ Sbjct: 340 YIHRLKAIAAAAGDDPEVNIEVLIGQLVSV----NGAKLSKRAGNIIELKDLIDWLGKDA 395 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 VR+ + L D +K+ S ENPVFYVQYA+AR R R A + D Sbjct: 396 VRYSLARFPADSPLTLDPELLKKNSNENPVFYVQYAHARSRGAARNAVAAGVERQVDGAD 455 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 +E +L+ +L YP ++ A +EP+++A +L +A +H + R Sbjct: 456 SFDASL--LDHATENELLSYLGSYPSIVAKAAELREPHRVARHLEAIAGAYHRWYDACRI 513 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P + + RL L A + ++ +GL+++GV +P M Sbjct: 514 APMG---EEAVTDVNRTRLWLNDATSQVLANGLDLLGVSAPERM 554 >gi|172061871|ref|YP_001809523.1| arginyl-tRNA synthetase [Burkholderia ambifaria MC40-6] gi|238689136|sp|B1YNQ7|SYR_BURA4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|171994388|gb|ACB65307.1| arginyl-tRNA synthetase [Burkholderia ambifaria MC40-6] Length = 593 Score = 513 bits (1322), Expect = e-143, Method: Composition-based stats. Identities = 198/616 (32%), Positives = 307/616 (49%), Gaps = 67/616 (10%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L AD +++ + LK D + I +ERP+ AHG ++ N AM L++PLG +P Sbjct: 12 LLADSVTQVAHALKGADAAF-----VAPAITLERPKVAAHGDVACNVAMQLAKPLGANPR 66 Query: 63 TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +AE IVA + P VD+ IAG GFINL L+ + + +++++ G +G + Sbjct: 67 QLAEKIVAALTAQPAAQGLVDAAEIAGPGFINLRLTAAAKQAVIAAVFEQGRAFGTSDRK 126 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA Sbjct: 127 KGKQVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPI 232 +S R + L D+ PE Y G Y+ + ++ A K + + L Sbjct: 187 ISTQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNRETVAAKDGEPVTGAGDIDDLDA 245 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + DL+A ++ D + E + + +D L + G YE Sbjct: 246 IRKFAVAYLRHEQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALVKAGMTYE---- 299 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L R+T GDD DR + KSDG+YTYF D+AY K+ERGF + Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTQV 347 Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 I + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+ Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKLSKRAGSYVTV 407 Query: 411 RHVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 R +++ G D+VRF ++ RK FD +Q+ EN Sbjct: 408 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 PV+YVQYA+AR S+ ++ + D+ + L+ LAEYP ++ Sbjct: 468 PVYYVQYAHARICSVLN---ELKSRYNVDVAQLPGADLAQLTSPQAVSLMQKLAEYPDML 524 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 +A P+ +AFYL DLA FH ++ R V ++ R L+ A + Sbjct: 525 THAAKELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577 Query: 570 INSGLNIIGVESPNEM 585 + +GL ++GV +P +M Sbjct: 578 LENGLAVLGVSAPAKM 593 >gi|78067731|ref|YP_370500.1| arginyl-tRNA synthetase [Burkholderia sp. 383] gi|109894977|sp|Q39CG0|SYR_BURS3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|77968476|gb|ABB09856.1| arginyl-tRNA synthetase [Burkholderia sp. 383] Length = 593 Score = 513 bits (1322), Expect = e-143, Method: Composition-based stats. Identities = 196/616 (31%), Positives = 306/616 (49%), Gaps = 67/616 (10%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L AD ++ + LK D + I +ERP+ AHG ++ N AM L++PLG +P Sbjct: 12 LLADSVKQVAHALKGADAAT-----VAPVITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66 Query: 63 TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +AE IVA + P V++ IAG GFINL LS + + +++++ G +G + Sbjct: 67 QLAEQIVAALTAQPGAQGLVEAAEIAGPGFINLRLSAAAKQAVIAAVFDQGRAFGTSDRE 126 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA Sbjct: 127 KGKQVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPI 232 +S R + L D+ PE Y G Y+ + ++ A + + + L Sbjct: 187 ISTQARAR-GLKPGDAGWPEAAYNGEYIADIARDFLNGETVAASDGEPVKGTGDVEDLDA 245 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + + DL+A ++ D + E + + +D L + G YE Sbjct: 246 IRKFAVTYLRREQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALIKAGMTYE---- 299 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L R+T GDD DR + KSDG+YTYF D+AY K+ERGF + Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTKV 347 Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 I + GSDH G + R+ A + K + +L ++V + R+G +K+SKRAG ++T+ Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMREGQEVKISKRAGSYVTV 407 Query: 411 RHVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 R +++ G D+VRF ++ RK FD +Q+ EN Sbjct: 408 RDLIEWSGGAAAGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 PV+YVQYA+AR S+ ++ + D+ L+ LAEYP ++ Sbjct: 468 PVYYVQYAHARICSVLN---ELKSRYNVDVAQLPGADLSQLTSAQAASLMQKLAEYPDML 524 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 +A P+ +AFYL DLA FH ++ R V ++ R L+ A + Sbjct: 525 THAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577 Query: 570 INSGLNIIGVESPNEM 585 + +GL ++GV +P +M Sbjct: 578 LENGLAVLGVSAPAKM 593 >gi|320094246|ref|ZP_08026048.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338] gi|319978824|gb|EFW10365.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338] Length = 559 Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats. Identities = 200/588 (34%), Positives = 307/588 (52%), Gaps = 41/588 (6%) Query: 6 DFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + +S ++ L + +V I D + +ERPR+ +G STNAAM L++ G P Sbjct: 5 ELASLIRAVLLDAAADGRVALGPSDIPDPVRVERPRNRDNGDWSTNAAMQLAKRAGTAPR 64 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +A LI + V+SV +AG GFIN+ L+ S ++ ++IV +G YG N G Sbjct: 65 DLAALIADALADAEGVESVEVAGPGFINIRLAASSAGQLAATIVEAGDSYGTNASLAGQD 124 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 +N+E+VSANPTGP+H+G R A VGD+LA LM SG VTREYY ND G+QI+ A S++ Sbjct: 125 INLEYVSANPTGPVHLGGARWAAVGDSLARLMTASGARVTREYYFNDHGSQIDRFARSLY 184 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS----ELLNFPEEKWLPIVKDYSV 238 R + PE Y G Y+ + + + + + PEE+ + + V Sbjct: 185 ARAL------GREAPEDGYGGQYIADIADRVRADARAAGLPDPVGLPEEEAVEAFRARGV 238 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + M I+ L A + D+F ED H D + I+ L +G V++ Sbjct: 239 ELMFAEIKARLSAFRSEFDVFFHEDSLH--DSGAVSAAIETLRGRGEVFD---------- 286 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 + R+T GDD DR L+KSDG YFAAD+AY+ K RG D +Y++G+ Sbjct: 287 ------RDGAVWLRTTSYGDDKDRVLIKSDGQAAYFAADVAYYLDKRRRGADAAVYLLGA 340 Query: 359 DHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 DH GY+ R+ A+ AA ++ + +L+ ++V L +DG P++MSKRAG +TL +VD V Sbjct: 341 DHHGYIGRMMAMCAAFGDEPGVNMQILIGQMVNLVKDGAPVRMSKRAGTIVTLDDLVDAV 400 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G D+ R+ ++ LD D + + + +NPV+YVQYA+AR R++ R A D D Sbjct: 401 GVDAARYALVRVSMDSNLDIDLDLLTQHTNDNPVYYVQYAHARTRNVARNAADHGVGRDA 460 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 P + +L+ LA++P I A +EP+++A YL LA +H + Sbjct: 461 GFDPAALDTAADA------ELLGALAQFPAQIAQAAQLREPHRVARYLEALAGTYHAWYG 514 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R PR + RL L AV+ ++ +GL ++GV +P M Sbjct: 515 QCRVTPRG---DDPVEAGHVARLWLNDAVSQVLRTGLGLLGVAAPERM 559 >gi|270284697|ref|ZP_05966509.2| arginine--tRNA ligase [Bifidobacterium gallicum DSM 20093] gi|270276344|gb|EFA22198.1| arginine--tRNA ligase [Bifidobacterium gallicum DSM 20093] Length = 631 Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats. Identities = 185/619 (29%), Positives = 314/619 (50%), Gaps = 71/619 (11%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 + S + + K + VE +++ + RP+D AHG ++NAAM L++ G+ P +A Sbjct: 45 ELSQLMYDTAKALVPA-DVELPPVEKFSVMRPKDRAHGDWASNAAMQLAKKAGMKPRDLA 103 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 E V +++ P + SV +AG GFIN+ L + ++ ++ G +G+N G +N+ Sbjct: 104 EQFVEKLQDVPGIASVEVAGPGFINITLDSASAAAVVDQVLAQGSAFGKNTHLGGKTLNL 163 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+H+G R A VGD++A ++ +G +V REYY ND G QIN A S+ Sbjct: 164 EFVSANPTGPIHIGGTRWAAVGDSMARVLEANGAKVIREYYFNDHGEQINRFAKSLVAAA 223 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS-------------------ELLNFPE 226 + P Y G Y+ + + + + ++ E L + Sbjct: 224 HE------ETTPVDGYKGAYIDEIARRVIAEANADGVDILNLPRVDGGTDEHGEPLGEGD 277 Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286 + + +V M I+ +K + D++ E+ + + + I +L +G + Sbjct: 278 SEQREEFRKRAVPMMFDEIQQSMKNFRVNFDVWFHENSLY--EDGEVDKAIADLRARGDI 335 Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346 +E F ST GDD DR ++KSDG+Y YFAAD+AY++ K Sbjct: 336 FE----------------KDGATWFASTKHGDDKDRVIIKSDGNYAYFAADVAYYRNKRH 379 Query: 347 RG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSK 402 R D IY++G+DH GY+ R+ A+ AA ++ Q + +L+ +LV + +DG P++MSK Sbjct: 380 REEGSADVAIYMLGADHHGYIGRMMAMCAAYGDEPGQHMQILIGQLVNVMKDGKPVRMSK 439 Query: 403 RAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCR 462 RAG+ +T+ +VD +G D+ R+ + + +D D + S ENPV+YVQYA+AR Sbjct: 440 RAGNIVTIDDLVDAIGVDASRYSLARTDYNSPVDIDLDLLASHSNENPVYYVQYAHARSC 499 Query: 463 SIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLA 522 ++ R A + D ++ ++E D ++I LA++P V+ A + P+++A Sbjct: 500 NVDRNAAEAGITTDG----ADLALLDTEADG---EVIAALAQWPGVLAEAGDKRAPHRVA 552 Query: 523 FYLYDLASVFHGHWSHGRENP----------------RLRFVQANNRKLTMMRLQLVHAV 566 YL DLA+ +H ++ R P LR + RL+L AV Sbjct: 553 HYLEDLAAAYHKWYNVERVVPMGLTDPEQHLDTQAAEALRIAKNPEPARAAARLKLNDAV 612 Query: 567 ASIINSGLNIIGVESPNEM 585 +I +GL+++GV +P++M Sbjct: 613 QQVIVNGLDLLGVSAPDKM 631 >gi|188590897|ref|YP_001795497.1| arginyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424] gi|238692922|sp|B2AG76|SYR_CUPTR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|170937791|emb|CAP62775.1| ARGINYL-tRNA SYNTHETASE (ARGININE--tRNA LIGASE) PROTEIN [Cupriavidus taiwanensis LMG 19424] Length = 595 Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats. Identities = 195/615 (31%), Positives = 295/615 (47%), Gaps = 64/615 (10%) Query: 9 SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68 S L + + L + ERP+ AHG L+ N AM ++R L +P +A+ I Sbjct: 7 SNLAAAFTDAVRALAPADATLPAVTFERPKVAAHGDLACNVAMQVARALKSNPRELAQRI 66 Query: 69 VARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 VA ++ D V + IAG GFINL L+PS +L +++ G YG G +V Sbjct: 67 VAAVEADARAQGLVAGMDIAGPGFINLRLTPSAKADVLRAVLNEGDHYGARERGVHGQVL 126 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGP+HVGH R A +GD LA+L+++ G+ V RE+Y NDAG QI TLALSV R Sbjct: 127 VEFVSANPTGPLHVGHGRQAALGDALANLLSWQGWHVHREFYYNDAGVQIQTLALSVQAR 186 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPIVKDYSV 238 + L D+ PE Y G Y+ + + + + + ++ ++V Sbjct: 187 AR-GLKPGDASWPEAAYNGDYIADIAADFLAGKTVSASDGEPVTASGNVEDIDSIRKFAV 245 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + DL+A ++ D + E + + + +L +G YE Sbjct: 246 TYLRNEQDIDLQAFGVKFDRYYLESSLY--SDGRVDAAVQSLIDKGKTYES--------- 294 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 L R+T GDD DR + KSDG+YTYF D+AY K+ERGF +I V GS Sbjct: 295 -------EGALWLRTTDDGDDKDRVMKKSDGTYTYFVPDVAYHTTKWERGFTKVINVQGS 347 Query: 359 DHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 DH G + R+ A + + + +L ++V + ++G +K+SKRAG ++T+R +++ Sbjct: 348 DHHGTIARVRAGLQGLDIGIPQGYPDYVLHKMVTVMKNGEEVKISKRAGSYVTVRDLIEW 407 Query: 417 ------------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 G D+VRF +L RK FD +Q+ ENPV+ Sbjct: 408 SNGGDETIRGCLEQGVADWPAHFTRGRDAVRFFLLSRKADTEFVFDVDLALKQNDENPVY 467 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLI--VHLAEYPRVIE 510 YVQYA+AR SIF + + + D S L LAE+P ++ Sbjct: 468 YVQYAHARICSIFESWGGADWESRLAELAGADLSAVTGADASAQALALGRRLAEFPDMLA 527 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A P+ +AFYL DLA FH ++ R V ++ + RL L+ A ++ Sbjct: 528 AAAAELAPHAVAFYLRDLAGDFHAFYNADR-------VLVDDEAVKRARLALLAATRQVL 580 Query: 571 NSGLNIIGVESPNEM 585 +GL +IGV +P M Sbjct: 581 RNGLAVIGVSAPRRM 595 >gi|300741294|ref|ZP_07071315.1| arginine--tRNA ligase [Rothia dentocariosa M567] gi|300380479|gb|EFJ77041.1| arginine--tRNA ligase [Rothia dentocariosa M567] Length = 561 Score = 512 bits (1320), Expect = e-143, Method: Composition-based stats. Identities = 176/586 (30%), Positives = 296/586 (50%), Gaps = 42/586 (7%) Query: 6 DFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + S+ + L + ++ + L +ERP+ HG +TN A+ L++ +G +P Sbjct: 12 ELSAAIAQELDKTIASGQLTLADNAELPLARVERPKSREHGDWATNIALQLAKKVGKNPR 71 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +A ++ +I P V +V IAG GF+N+ L + + ++IV +G YG + G Sbjct: 72 EVAAVLADKIASIPGVSTVDIAGPGFLNITLDAAAAGTLAATIVEAGKTYGTSDKFAGKT 131 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 +N+EFVSANPTGP+H+G R A VGD LA+++ G V REYY ND G QI+ S+ Sbjct: 132 INLEFVSANPTGPIHLGGTRWAAVGDALANILEAEGANVVREYYFNDHGTQIDRFVNSLL 191 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 + PE Y G Y+ + ++ + L E + ++ + M Sbjct: 192 AAAK------GEPTPEDGYAGAYITDIKDQILAQRPDAL---DAENSAEVFREIGTELMF 242 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 I++ L D+F E+ + II+ + + G ++E Sbjct: 243 AQIKESLHRFGTDFDVFFHENSVF--ESGEADRIIEQMKQDGQLFES------------- 287 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER---GFDNMIYVMGSD 359 R+T GDD DR ++KSDG++ Y A D+AYF+ K R D IY++G+D Sbjct: 288 ---EGAWWMRTTDYGDDKDRVVIKSDGNHAYVAGDIAYFRNKMTRPENPADIAIYMLGAD 344 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 HSGYV RL+A+A + + QI V++ +LV L +DG ++MSKRAG+ +TL +V+ VG Sbjct: 345 HSGYVGRLKAIAQILGYRTEQIEVMIGQLVNLVKDGKHVRMSKRAGNVVTLEDLVEAVGV 404 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ ++ +D D + ++S +NPV+YVQYA+AR ++ R A +D + Sbjct: 405 DAARYELIRYSVDSTIDIDLDLLVQKSSDNPVYYVQYAHARTAAVERNA------IDAGV 458 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + ++ +L+ L +YP + A EP++++ YL +LA+ +H + Sbjct: 459 HLADGVDTGLLNTPADTELLAVLGQYPATVRTAAEFYEPHRVSRYLENLAAAYHSWYGLS 518 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R P+ L RL L +A ++ +GL ++GV +P M Sbjct: 519 RVAPKG---DEPVTDLHRTRLLLNNATRQVLANGLGLLGVTAPERM 561 >gi|71066501|ref|YP_265228.1| arginyl-tRNA synthetase [Psychrobacter arcticus 273-4] gi|109895022|sp|Q4FQB4|SYR_PSYA2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|71039486|gb|AAZ19794.1| arginyl-tRNA synthetase [Psychrobacter arcticus 273-4] Length = 609 Score = 512 bits (1320), Expect = e-143, Method: Composition-based stats. Identities = 185/625 (29%), Positives = 309/625 (49%), Gaps = 70/625 (11%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 +S + + + ++ + I R +D +HG ++N A+ ++ +P +AE Sbjct: 9 LASLFDSAIAVLKNDGELPADWQNNSQITRTKDASHGDFASNIALTAAKAAKANPRQVAE 68 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 IV + + D+ + IAG GFIN++L+ +L I +G + G KV +E Sbjct: 69 KIVNALPENQDIRQIEIAGPGFINVFLNTEAKFAVLDDIFNLQAGFGLSKQFDGQKVQVE 128 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPT +HVGH R A G ++++L+ GY+VTREYY+NDAG Q++ LA S + RY Sbjct: 129 FVSANPTSSLHVGHGRGAAFGMSVSNLLEAIGYDVTREYYVNDAGRQMDILATSTYLRYL 188 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL--------NFPEEKWLPIVKD--- 235 + P Y G Y+ + + L +++ + + PE+ I D Sbjct: 189 E-TNGEPVTFPVNGYQGDYVSDIAQTLKTQHADTYVHRFAEIAKDVPEDAQFEINADGEK 247 Query: 236 -------------------------------YSVQAMMKIIRDDLKALNIQHDIFISEDD 264 ++ +++ I+DDL + ++ + SE Sbjct: 248 VLLSGDKEAHIDGLIANSKALLGSGYELFLNAALSSILADIKDDLNDFGVSYECWFSERS 307 Query: 265 FHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 S I ++ L +GY+YE + F+ST GD+ DR + Sbjct: 308 I----DSEIEPVLQILEDKGYLYE----------------KDGNIWFKSTDFGDEKDRVV 347 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 +++G TYFA+D+AY K K++RGFD ++ V G+DH GYV R++A A+ +++V+ Sbjct: 348 RRANGQSTYFASDIAYHKNKFDRGFDKVVNVWGADHHGYVPRVKAALLALGIDADRLDVV 407 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L + V L+R ++MS R+G F+TLR + EVG+D+ RF + RK +DFD K Sbjct: 408 LVQFVALWRGDEKVQMSSRSGKFVTLRELRHEVGNDAARFYYVARKPEVHVDFDLELAKS 467 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAE 504 QSK+N V+Y+QYA+AR + + + ++ + QE +SE +LI LA Sbjct: 468 QSKDNLVYYIQYAHARVCRVLEKLEASGLSVNDAMGAE---QQELLVASSEEELIKLLAA 524 Query: 505 YPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR----LRFVQANNRKLTMMRL 560 YP + + EP+ L YL +LA++FHG + R P A+ + RL Sbjct: 525 YPATLLRSATGYEPHILTNYLKELAALFHGWYDSNRILPVSLTSGETPSADEMAMMQARL 584 Query: 561 QLVHAVASIINSGLNIIGVESPNEM 585 +L AV +I++GL ++G+ +P+ M Sbjct: 585 RLSKAVRLVISNGLGLLGLSAPSSM 609 >gi|171464254|ref|YP_001798367.1| arginyl-tRNA synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|238692828|sp|B1XSF4|SYR_POLNS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|171193792|gb|ACB44753.1| arginyl-tRNA synthetase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 575 Score = 512 bits (1320), Expect = e-143, Method: Composition-based stats. Identities = 197/610 (32%), Positives = 295/610 (48%), Gaps = 72/610 (11%) Query: 8 SSRLKNYLKEIDCKIKVEKKI--LDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 +RL L + E+ + +ERP+ HG ++ N A+ LS+ L+P +A Sbjct: 6 KNRLIEMLSAALTGLAQERGLEAPPTPRLERPKAVDHGDVACNIALQLSKAWKLNPRELA 65 Query: 66 ELIVARIKI----DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG- 120 + +V R++ + + S IAG GF N LS + ++ I+ G +G + G Sbjct: 66 QALVERLQQQTGFNELIASCEIAGPGFSNFRLSNAAKTAVVQEILSGGTSFGESAPADGS 125 Query: 121 -TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 T IEFVSANPTGP+HVGH R A +GD LA+L+A G +V RE+Y NDAG QI LAL Sbjct: 126 ATSAMIEFVSANPTGPLHVGHGRQAALGDALANLLATQGIKVHREFYYNDAGVQIANLAL 185 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SV R Q L D+ PE Y G Y+ + K S E + + ++ ++V Sbjct: 186 SVQAR-LQGLKPGDAKWPEQAYNGEYIAEIATTF--KASPEFKD-----DIEAIRQFAVA 237 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 + DLK ++ D + E + + I+ +L G YE Sbjct: 238 YLRNEQDIDLKTFGVKFDCYYLESSLYT--DGSVAQIVGDLQSIGKTYES---------- 285 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 L ++ GDD DR + KSDGS+TYF D+AY K+ RGF +I V GSD Sbjct: 286 ------EGVLWLKTIDDGDDKDRVMRKSDGSFTYFVPDVAYHTSKWNRGFQKVINVQGSD 339 Query: 360 HSGYVKRLE----AVAAAVSEK--KAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 H G + R+ VA K + +L ++V + R G +K+SKRAG ++T+R + Sbjct: 340 HHGTIARVRSGLQGVAQKRGWDIPKTYPDYVLHKMVTVMRHGEEVKISKRAGSYVTVRDL 399 Query: 414 VDE------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455 V+ G D+VRF ++ RK FD +Q+ ENPVFYVQ Sbjct: 400 VEWSGGVTPEMTSEERELALQRGRDAVRFFLISRKADTEFVFDIDLALQQNDENPVFYVQ 459 Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515 YA+AR SI +Q DL ++ +S+ L+ LAEYP ++ A Sbjct: 460 YAHARISSILQQWGGQTS----DLASADLSLLQSKASDH---LLRCLAEYPEMLTTAAEE 512 Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575 P+ LAFYL +LA FH ++ R V +++ L + RL L+ A ++ +GL Sbjct: 513 LAPHALAFYLRNLAGDFHTFYNADR-------VLVDDQNLKLARLALLSATRQVLQNGLK 565 Query: 576 IIGVESPNEM 585 ++GV +P +M Sbjct: 566 VLGVSAPAKM 575 >gi|315925515|ref|ZP_07921725.1| arginine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263] gi|315621056|gb|EFV01027.1| arginine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263] Length = 563 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 189/586 (32%), Positives = 288/586 (49%), Gaps = 40/586 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + ++ + + L I +E PR+ G +TN AM L + P IAE Sbjct: 11 LKAAVEKAVNAAVADGAFSIEHLPAIQLEVPREAQFGDYATNVAMQLPGQAHMAPRAIAE 70 Query: 67 LIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 IV V IAG GFIN L P++ +++ I G +YGR G N+ Sbjct: 71 AIVGHFDAAAAYVQDVTIAGPGFINFALDPTWHYEVIGEIEAKGADYGRTTGNAGKTYNL 130 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGPMH+G+ R +GD LA + A++GY+VTRE+Y+NDAG QI S+ R+ Sbjct: 131 EFVSANPTGPMHMGNARGGAIGDVLAEIAAWTGYDVTREFYVNDAGNQIAKFGDSLDARF 190 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYS-----SELLNFPEEKWLPIVKDYSVQA 240 +Q L D PE Y G ++ +E + LL+ E + DY+++ Sbjct: 191 RQLL-GEDIPFPEDGYQGADIRAHMEEYIAENGGKAAVRPLLDRTPETRKALFVDYALKK 249 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 ++ + D+++ + +D++ SE + D I + L +G Y+ Sbjct: 250 NLRQMHADMESYGVDYDVWFSEQSMY--DDGEIERALKLLKDKGATYD------------ 295 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSD 359 F++T G + D L++ +G TYF D+AY K RGFD + V G+D Sbjct: 296 ----KEGATWFKTTDYGCEKDDVLIRQNGLPTYFMGDIAYHLNKLLTRGFDRAVNVWGAD 351 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H G++ RL+A AA +++ ++ +LVRL RDG P++MSKR G I L ++D VG Sbjct: 352 HHGHIARLKAAIAAAGVDASRLEIVTMQLVRLIRDGEPVRMSKRQGKAIGLTELLDMVGI 411 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R R DFD QS +NPVFYVQYA+AR SI RQ D DL Sbjct: 412 DAARVFFNLRSPDSHFDFDLDLAIRQSNDNPVFYVQYAHARIASILRQLGG-----DVDL 466 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + E + EL+L+ L+++P I A +P ++ Y LAS FH ++ Sbjct: 467 AAPAKL--ELLTNPKELELLSVLSDFPETIVAAEHKMDPSRMVHYAQRLASAFHTFYNEC 524 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R V+ ++ L RL+L+ A ++ + L I+GV++P M Sbjct: 525 R-------VRVDDADLMHARLKLILACRQVLENVLGILGVDAPEAM 563 >gi|206559077|ref|YP_002229837.1| arginyl-tRNA synthetase [Burkholderia cenocepacia J2315] gi|238693086|sp|B4E9M9|SYR_BURCJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|198035114|emb|CAR50988.1| putative arginyl-tRNA synthetase [Burkholderia cenocepacia J2315] Length = 593 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 197/616 (31%), Positives = 306/616 (49%), Gaps = 67/616 (10%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L AD ++ + LK D + I +ERP+ AHG ++ N AM L++PLG +P Sbjct: 12 LLADSVKQVAHALKGADAAF-----VAPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66 Query: 63 TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +AE IVA + P V++ IAG GFINL LS + + +++++ G +G + Sbjct: 67 QLAEQIVAALTAQPAAQGLVEAAEIAGPGFINLRLSAAAKQAVIAAVFDQGRAFGTSDRE 126 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA Sbjct: 127 KGKQVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPI 232 +S R + L D+ PE Y G Y+ + ++ A + + + L Sbjct: 187 ISTQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNGETVAASDGEPVKGTGDVEDLDA 245 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + + DL+A ++ D + E + + +D L + G YE Sbjct: 246 IRKFAVTYLRREQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALVKAGMTYE---- 299 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L R+T GDD DR + KSDG+YTYF D+AY K+ERGF + Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTKV 347 Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 I + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+ Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTV 407 Query: 411 RHVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 R +++ G D+VRF ++ RK FD +Q+ EN Sbjct: 408 RDLIEWSGGAAAGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 PV+YVQYA+AR S+ ++ + D+ L+ LAEYP ++ Sbjct: 468 PVYYVQYAHARICSVLN---ELKSRYNVDVAQLPGADLSQLTSAQATSLMQKLAEYPDML 524 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 +A P+ +AFYL DLA FH ++ R V ++ R L+ A + Sbjct: 525 THAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDAAPRNARAALLAATRQV 577 Query: 570 INSGLNIIGVESPNEM 585 + +GL ++GV +P +M Sbjct: 578 LENGLAMLGVSAPAKM 593 >gi|268609113|ref|ZP_06142840.1| arginyl-tRNA synthetase [Ruminococcus flavefaciens FD-1] Length = 588 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 182/608 (29%), Positives = 293/608 (48%), Gaps = 58/608 (9%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 + + L + + V + IE P D +HG + N AM+ ++ + P IA Sbjct: 11 QLREMIMDALGVLVAEQAVPAVPMPDFTIEIPADKSHGDFAANTAMVCAKAFKMPPRKIA 70 Query: 66 ELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 ELI +++++ + + +AG GF+N +L + +++ +++ G YG+ G G + Sbjct: 71 ELITEKVQMEGTMFEKTEVAGPGFMNFFLGRKWFSQVVENVLEEGENYGKTDTGAGKRAL 130 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGPMH+G+ R +GD LAS++ ++G+ RE+Y+NDAG QI S+ R Sbjct: 131 VEFVSANPTGPMHIGNARGGAIGDCLASVLQWAGWHAEREFYVNDAGNQIEKFGKSLSLR 190 Query: 185 YQQALYN--------------------------NDSDLPEGYYPGVYLKHVGKELADKYS 218 Y D +PE Y G + K D + Sbjct: 191 YMHICSEKGQEIYKSAADTEEVCRRIYGEDGSSEDFPMPEDVYLGQDIIEHAKNYFDLHG 250 Query: 219 SELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 + L N EE+ + DY++ + + DLK I +D + E H + + + ++D Sbjct: 251 NSLENVSEEERRKALVDYALPLNIAGLERDLKKYRIVYDNWFRESTVHEKNETKL--VVD 308 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 L G YE + FR+T G D D L +S+G YTY D+ Sbjct: 309 KLMEAGKAYE----------------QDGAVWFRATDYGMDKDFVLKRSNGLYTYIVPDI 352 Query: 339 AYFKCK-YERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397 AY K R FD I V+G+DH GYV RL+A A+ ++++V+L ++VRL R+G Sbjct: 353 AYHYNKLVTRNFDKAINVLGADHHGYVPRLKAALTALGVDASKLDVVLMQMVRLVRNGET 412 Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457 +K+SKR+G ITL ++DE+ D+ RF R+ + +FD E+S +NPV+YVQYA Sbjct: 413 VKLSKRSGKAITLVTLLDEIPIDAARFFFNLREANSQFEFDLDLAIEKSSQNPVYYVQYA 472 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 +AR S+ R + + D+ E++LI HLA P+ ++ A + Sbjct: 473 HARICSMLRALAEEGTQV------PEKADLSVLTDSREIELIRHLASLPKEVDLAAKTYD 526 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNII 577 P K+ Y DLA++FH + A +L RL L AV + + L I+ Sbjct: 527 PAKITKYAVDLATLFHRFYDAC------SVKNAETEELKNARLLLCVAVRQTLRNVLTIL 580 Query: 578 GVESPNEM 585 +E+P +M Sbjct: 581 NIEAPEKM 588 >gi|134297105|ref|YP_001120840.1| arginyl-tRNA synthetase [Burkholderia vietnamiensis G4] gi|166232769|sp|A4JIA2|SYR_BURVG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|134140262|gb|ABO56005.1| arginyl-tRNA synthetase [Burkholderia vietnamiensis G4] Length = 593 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 198/616 (32%), Positives = 310/616 (50%), Gaps = 67/616 (10%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L AD +++ + LK D + ++ I +ERP+ AHG ++ N AM L++PLG +P Sbjct: 12 LLADSVAQVAHALKGADAEF-----VIPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66 Query: 63 TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +AE IVA + P VD+ IAG GFINL +S + + +++++ G +G + Sbjct: 67 QLAERIVAALVAQPAAQGLVDAAEIAGPGFINLRVSAAAKQAVIAAVFEQGRAFGTSQRE 126 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA Sbjct: 127 KGKRVLVEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIANLA 186 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPI 232 +S R + L D+ PE Y G Y+ + ++ A K + + + L Sbjct: 187 ISTQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNGATVAAKDGEPVTGARDIENLDA 245 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + DL+A ++ D + E + + +D L + G YE Sbjct: 246 IRKFAVAYLRHEQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALVKAGMTYE---- 299 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L R+T GDD DR + KSDG+YTYF D+AY K+ERGF + Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTKV 347 Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 I + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+ Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKLSKRAGSYVTV 407 Query: 411 RHVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 R +++ G D+VRF ++ RK FD +Q+ EN Sbjct: 408 RDLIEWSGGAAPGQEAAPDMIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 PV+YVQYA+AR S+ ++ + D+ + L+ LAEYP ++ Sbjct: 468 PVYYVQYAHARICSVLN---ELKARYNVDVAQLPGADLSQLTSPQAVSLMQKLAEYPDLL 524 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 +A P+ +AFYL DLA FH ++ R V ++ R L+ A + Sbjct: 525 THAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577 Query: 570 INSGLNIIGVESPNEM 585 + +GL ++GV +P +M Sbjct: 578 LENGLAMLGVSAPAKM 593 >gi|311113372|ref|YP_003984594.1| arginine--tRNA ligase [Rothia dentocariosa ATCC 17931] gi|310944866|gb|ADP41160.1| arginine--tRNA ligase [Rothia dentocariosa ATCC 17931] Length = 561 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 176/586 (30%), Positives = 296/586 (50%), Gaps = 42/586 (7%) Query: 6 DFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + S+ + L + ++ + L +ERP+ HG +TN A+ L++ +G +P Sbjct: 12 ELSAAIAQELDKTIASGQLTLADNAELPLARVERPKSREHGDWATNIALQLAKKVGKNPR 71 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +A ++ +I P V +V IAG GF+N+ L + + ++IV +G YG + G Sbjct: 72 EVAAVLADKIASIPGVSTVDIAGPGFLNITLDAAAAGTLAATIVEAGNTYGTSDKFAGKT 131 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 +N+EFVSANPTGP+H+G R A VGD LA+++ G V REYY ND G QI+ S+ Sbjct: 132 INLEFVSANPTGPIHLGGTRWAAVGDALANILEAEGANVVREYYFNDHGTQIDRFVNSLL 191 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 + PE Y G Y+ + ++ + L E + ++ + M Sbjct: 192 AAAK------GEPTPEDGYAGAYITDIKDQILAQRPDAL---DAENPAEVFREIGTELMF 242 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 I++ L D+F E+ + II+ + + G ++E Sbjct: 243 AQIKESLHRFGTDFDVFFHENSVF--ESGEADRIIEQMKQDGQLFES------------- 287 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER---GFDNMIYVMGSD 359 R+T GDD DR ++KSDG++ Y A D+AYF+ K R D IY++G+D Sbjct: 288 ---EGAWWMRTTDYGDDKDRVVIKSDGNHAYVAGDIAYFRNKMTRPENPADIAIYMLGAD 344 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 HSGYV RL+A+A + + QI V++ +LV L +DG ++MSKRAG+ +TL +V+ VG Sbjct: 345 HSGYVGRLKAIAQILGYRTEQIEVMIGQLVNLVKDGKHVRMSKRAGNVVTLEDLVEAVGV 404 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ ++ +D D + ++S +NPV+YVQYA+AR ++ R A +D + Sbjct: 405 DAARYELIRYSVDSTIDIDLDLLVQKSSDNPVYYVQYAHARTAAVERNA------IDAGV 458 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + ++ +L+ L +YP + A EP++++ YL +LA+ +H + Sbjct: 459 HLADGVDTGLLNTPADTELLAVLGQYPATVRTAAEFYEPHRMSRYLENLAAAYHSWYGLS 518 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R P+ L RL L +A ++ +GL ++GV +P M Sbjct: 519 RVAPKG---DEPVTDLHRTRLLLNNATRQVLANGLGLLGVTAPERM 561 >gi|118602135|ref|YP_903350.1| arginyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|166232836|sp|A1AVC2|SYR_RUTMC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|118567074|gb|ABL01879.1| arginyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 567 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 198/606 (32%), Positives = 322/606 (53%), Gaps = 66/606 (10%) Query: 7 FSSRLKNYLKE---IDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 +L+ LK+ + V + + I I+ +D G ++N AM+L++ GL P Sbjct: 1 MKEQLQKILKQSLNLLENEGVLESAPENIRIDHTKDKTQGDFASNIAMVLAKRSGLIPKV 60 Query: 64 IAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 +A+ I+ + + +D V IA GFIN ++S +I+ I+ YG+ +GKG ++ Sbjct: 61 LAQKIIDNLGDNTQIDKVQIADPGFINFFISQGESVQIIEQIINQAEHYGKADVGKGQRI 120 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EFVSANPTGP+HVGH R A G T+ASL+ G+EV EYY+NDAG Q++ LA+SV+ Sbjct: 121 LLEFVSANPTGPLHVGHGRVAAYGATVASLLRAVGFEVDNEYYVNDAGRQMDILAISVYL 180 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKEL---------------------ADKYSSELL 222 RY + P+ Y G Y+ + K++ +K+ L+ Sbjct: 181 RYVET-----EQFPDNGYKGDYIFDIAKKISGVKKLDIFISQRSVKKNAGNKEKHIDRLI 235 Query: 223 ---NFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279 F + D ++ ++ I+ DL +++ + SE D ++I+ Sbjct: 236 ANCKFQLGHDYKKILDLAINNILSGIKIDLVEFGVKYQQWFSEQSL--MDSGLSKEIVKK 293 Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339 L GY+YE L F++T GDD+DR +++ +G YTYFA+D+A Sbjct: 294 LQDSGYIYE----------------KEGALWFKTTDFGDDLDRVVVRKNGKYTYFASDIA 337 Query: 340 YFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIK 399 Y K+ERG+D +I + G DH GY+ R++A A++ ++ +LL + V L+R+G Sbjct: 338 YHLEKFERGYDKIINIWGVDHHGYIARIKASIKALNHNSNKLEILLVQFVNLFRNGKKAS 397 Query: 400 MSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYA 459 MS R+G FITL + +EVG+D+ RF + K+ + ++FD K +S ENPVFY+QYA+A Sbjct: 398 MSTRSGSFITLEELREEVGNDAARFFYILSKSGQHMNFDLDLAKSKSNENPVFYIQYAHA 457 Query: 460 RCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPY 519 R S+ +QAK +D DL N + SE LI L Y +++++ + EP+ Sbjct: 458 RICSVLKQAKSPSM-VDIDLSVLN--------NESEALLIKELNRYKDILQSSALNYEPH 508 Query: 520 KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGV 579 LA YL +LA FH ++++ + ++ KL RL L+ AV I+ +GLN++GV Sbjct: 509 VLACYLRELAGHFHSYYNNSKF-------LVDDDKLRNARLFLIIAVKQILVNGLNLLGV 561 Query: 580 ESPNEM 585 +P+ M Sbjct: 562 SAPDSM 567 >gi|256390399|ref|YP_003111963.1| arginyl-tRNA synthetase [Catenulispora acidiphila DSM 44928] gi|256356625|gb|ACU70122.1| arginyl-tRNA synthetase [Catenulispora acidiphila DSM 44928] Length = 556 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 189/582 (32%), Positives = 308/582 (52%), Gaps = 32/582 (5%) Query: 6 DFSSRLKNYLKEIDCKIKVE-KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 S + + + E + + + +ERP++ HG +TN A+ L++ G+ P + Sbjct: 5 QLSQAVLDTVNEAVADGALTLTAVPATVTVERPKNRDHGDYATNVALQLTKAAGMPPRAL 64 Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 AEL+ R++ + V +AG GF+NL L+ ++ SIV G +YGR+ VN Sbjct: 65 AELLAERLREVEGIAGVDVAGPGFLNLKLAAGAAGELAKSIVEQGAQYGRSETFAAQIVN 124 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGP+H+GH R A VGD L L+ +G +VTRE+YINDAG Q+N LS+ R Sbjct: 125 LEFVSANPTGPLHLGHTRWAAVGDALGRLLEAAGADVTREFYINDAGNQMNNFGLSLALR 184 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKI 244 + +G Y G Y+K + + + +++ L P+E + + + +++ Sbjct: 185 AN----GEEVPSGQGLYEGAYIKDLAQAILEEH-PVLTQLPQEAQVEAFRTAGYKTQLRL 239 Query: 245 IRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDM 304 ++ L+ D++ SE H + + + D LA QG+V+E Sbjct: 240 QQESLEKFRTHFDVWFSEKTLH--ESGAVEGVADRLAEQGHVFE---------------- 281 Query: 305 DRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYV 364 + R+T GDD DR +++S+G TYF+AD AY+ K +RG+ IY++G+DH GYV Sbjct: 282 QDGAVWLRTTDFGDDKDRVIVRSNGERTYFSADCAYYLNKRDRGYSPCIYMLGADHHGYV 341 Query: 365 KRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVR 423 RL+A+AA + Q I VL+ + V++ +DG +K+SKR G+ +TL V+D +G D+ R Sbjct: 342 GRLKAMAACSGDDPEQDIEVLIGQFVKMVKDGEEVKLSKRTGNIVTLDDVIDLIGVDAAR 401 Query: 424 FMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRN 483 + + L D + Q ENPV+YVQYA++R S+ R A ++ FD Sbjct: 402 YALARSSVDNELVLDVDLLTSQKAENPVYYVQYAHSRMASVKRNAAELG----FDKGTAE 457 Query: 484 VIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP 543 E E L+ LAE+PRVI A ++ +++A YL D+A +HG ++ R P Sbjct: 458 DFKPELLSHPREEALLAALAEFPRVIAQAAGLRKVHQVAHYLEDMAKKYHGFYTDCRILP 517 Query: 544 RLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L R+ L A +++ +GL+++GV +P M Sbjct: 518 ---LGEDKPSDLNRARMWLAEATQTVLRNGLDLLGVSAPERM 556 >gi|269219842|ref|ZP_06163696.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332] gi|269210747|gb|EEZ77087.1| arginine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332] Length = 558 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 192/588 (32%), Positives = 297/588 (50%), Gaps = 42/588 (7%) Query: 6 DFSSRLKNYLKEIDCKIKVE-KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 + S + + L + + L + +ERPR HG +TN AM L+R G +P + Sbjct: 5 ELSRLVADELASAVADGTLTIEGELPVVKVERPRSREHGDWATNVAMQLARRAGRNPREL 64 Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 EL+ ARI V+ +AG GF+N+ LS + + ++ ++V +G YGR G VN Sbjct: 65 GELLAARIAAHDGVEEAEVAGPGFVNIRLSAASVGELARAVVEAGGSYGRTEGDAGKTVN 124 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +E+VSANPTGP+H+G R A VGD+LA ++ FSG +V +EYY ND G QI+ A S+ R Sbjct: 125 LEYVSANPTGPLHIGGARWAAVGDSLARILEFSGAKVVKEYYFNDHGNQIDRFAASLLAR 184 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKY----SSELLNFPEEKWLPIVKDYSVQA 240 + D+PE Y G Y+ + + + + +E+ + V+ Sbjct: 185 AR------GEDVPEDGYGGQYVTEIAERVVADSIADGEPDPRELSDEQAHEAFRSRGVEL 238 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 M I+ L D+F ED H + + I+ L +G VYE Sbjct: 239 MFAEIKSSLHDFRSDFDVFFHEDSLH--ESGAVSKAIERLRERGVVYE------------ 284 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 L +T GDD DR ++KSDG YFA DLAY+ K RG DN +Y++G+DH Sbjct: 285 ----KEGALWLCTTDFGDDKDRVIVKSDGEAAYFAGDLAYYLDKRARGADNCVYMLGADH 340 Query: 361 SGYVKRLEAVAAAVSEKKA---QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 GY+ R+ A+A A + + +L+ +LV L R G+P++MSKRAG +TL +VD V Sbjct: 341 HGYIGRMYAMARAYGDTAGPGENMEILIGQLVNLVRSGVPVRMSKRAGTVVTLEDLVDAV 400 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G D+ R+ ++ LD D V ++ +NPV+YVQYA+AR S+ A + Sbjct: 401 GVDAARYSLVRASVDTTLDLDLDLVASRTNDNPVYYVQYAHARTCSVASNAASHGVRRED 460 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 P + +SE L+ LA +P V + I +EP+++A YL ++A+ +H + Sbjct: 461 GFAPGLLDAVDSE-------LLGTLARFPDVAAQSAILREPHRVARYLEEVAAAYHTWYG 513 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R PR + L RL + A ++ +GL ++GV +P M Sbjct: 514 KARVTPR---AEEEVADLHRTRLWVNDAAGVVLANGLGLLGVSAPERM 558 >gi|88855307|ref|ZP_01129971.1| arginyl-tRNA synthetase [marine actinobacterium PHSC20C1] gi|88815214|gb|EAR25072.1| arginyl-tRNA synthetase [marine actinobacterium PHSC20C1] Length = 553 Score = 511 bits (1317), Expect = e-142, Method: Composition-based stats. Identities = 189/591 (31%), Positives = 307/591 (51%), Gaps = 44/591 (7%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKIL--DRIVIERPRDCAHGHLSTNAAMILSRPLG 58 M AD S+ L + + I L + +V+ERPR+ HG ++N AM L++ LG Sbjct: 1 MNP-ADLSATLLSVVTRIAADRGTPDLGLTVNDLVLERPRNRDHGDWASNVAMKLAKTLG 59 Query: 59 LDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 P +A I +++ + +V +AG GFIN+ L + + +IV G YG N Sbjct: 60 ASPRELATEIAEQVRTIDGIAAVDVAGPGFINITLDAAAAGALAKTIVEQGDAYGSNDSL 119 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G +N+EFVSANPTGP+H+GH R A +GD+LA ++ +G E+ E+YINDAG Q++ Sbjct: 120 AGQTINLEFVSANPTGPLHIGHTRWAALGDSLARILKTAGAELVSEFYINDAGNQMDNFG 179 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSV 238 S+ Q PE YPG Y+ + KE+ + ELL+ + + + ++ Sbjct: 180 ASILASAQ------GEPTPENGYPGAYIAELAKEVLVSH-PELLDLEHDAAIAVARERGY 232 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEGILPPPK 295 + + I+ L N+ D++ SE H + S I + ++ L QG+V Sbjct: 233 ELQLGAIKKSLADFNVHFDVWFSERSLHVANGEGASAIDEAVERLRAQGHV--------- 283 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 D D + +T GDD DR + + +G YTYFA+D AY+ K +RGF + IY+ Sbjct: 284 ------VDRDD-AVWVTTTDFGDDKDRVIKRGNGVYTYFASDAAYYLSKGDRGFAHKIYL 336 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVV 414 +G+DH GYV RL+A+A A + + I V++ +LV + ++SKRAG+ I L + Sbjct: 337 LGADHHGYVHRLKALAGAAGDDPNKDIEVMIGQLVSI----NGARLSKRAGNIIELDDLR 392 Query: 415 DEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPD 474 + +G+D++R+ + L D +K+++ +NPVFYVQYA+AR S+ R A + D Sbjct: 393 EWLGTDALRYSLGRYPADSPLTLDPEILKKRTNDNPVFYVQYAHARTHSVARNAGESGVD 452 Query: 475 LDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHG 534 R+V + +E L+ LAE+PR++ A +EP+++A Y +LA +H Sbjct: 453 -------RSVFDASLLTNETESILLGVLAEFPRIVAQAAELREPHRVARYAEELAGSYHR 505 Query: 535 HWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R P + RL + AV ++ +GL ++GV +P M Sbjct: 506 WYDQCRVTPMN---DEEATDVHRTRLWVNDAVGQVLRNGLWMLGVSAPERM 553 >gi|121607568|ref|YP_995375.1| arginyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2] gi|121552208|gb|ABM56357.1| arginyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2] Length = 569 Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats. Identities = 186/573 (32%), Positives = 291/573 (50%), Gaps = 47/573 (8%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP----DVDSVFIAGK 86 + +E P+ AHG + AA+ L++ L ++P +AE + + + P V + IAG Sbjct: 26 KAALESPKVAAHGDFACTAALQLAKTLHMNPRQMAEKLRSALLATPAFQRWVSDIDIAGP 85 Query: 87 GFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVV 146 GFIN+ L P+ + ++S ++ +G +G G +V +EFVSANPTGP+HVGH R A + Sbjct: 86 GFINIRLKPAARQAVVSEVLAAGAHFGCQPP-NGQRVLVEFVSANPTGPLHVGHGRQAAL 144 Query: 147 GDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ-----QALYNNDSDLPE--G 199 GD + L A G++V RE+Y NDAGAQI TLA S R + A + D D P G Sbjct: 145 GDAICKLFATQGWQVHREFYYNDAGAQIQTLAHSTRLRAKGFKPGDACWPTDPDDPASRG 204 Query: 200 YYPGVYLKHVGKELADK-----YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNI 254 +Y G Y++ + + + + L ++ ++V + DL+A N+ Sbjct: 205 FYNGDYIQDIANDFLAQKTVQADDRSFTASGDVDDLESIRQFAVAYLRNEQDKDLRAFNL 264 Query: 255 QHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRST 314 Q D + E + + ++ L G YE L RST Sbjct: 265 QFDEYYLESSLYT--SGRVEAAVNRLIANGKTYE----------------RDGALWLRST 306 Query: 315 MVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA- 373 GDD DR + K DGSYTYF D+AY K+ERG+ ++ V G+DH G + R+ A A Sbjct: 307 DYGDDKDRVMRKQDGSYTYFVPDVAYHIAKWERGYAKVVNVQGTDHHGTIARVRAGLQAA 366 Query: 374 -VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNS 432 V + +L +VR+ + G +K+SKRAG ++TLR +++ D+VRF +L RK Sbjct: 367 DVGIPPGYPDYVLHTMVRVVKGGQEVKISKRAGSYVTLRELIEWTSRDAVRFFLLSRKPD 426 Query: 433 ELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFD 492 FD Q+ +NPV+YVQYA+AR S+ R D D+ D Sbjct: 427 TEYSFDVDLAVAQNNDNPVYYVQYAHARICSVLRSWADQGGG---DMAVLRAADLSLLDD 483 Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552 L++ L +YP ++ AT +Q P+ ++FYL DLA+ +HG++ R + + Sbjct: 484 PQAQALMLQLGKYPAMLTAATASQAPHDVSFYLRDLAASYHGYYDAQR-------ILVAD 536 Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++ RL LV A A ++++GL ++GV +P M Sbjct: 537 ERVKHARLALVSATAQVLHNGLAVLGVSAPARM 569 >gi|115353019|ref|YP_774858.1| arginyl-tRNA synthetase [Burkholderia ambifaria AMMD] gi|122322101|sp|Q0BBE9|SYR_BURCM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|115283007|gb|ABI88524.1| arginyl-tRNA synthetase [Burkholderia ambifaria AMMD] Length = 593 Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats. Identities = 198/616 (32%), Positives = 307/616 (49%), Gaps = 67/616 (10%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L AD +++ + LK D + I +ERP+ AHG ++ N AM L++PLG +P Sbjct: 12 LLADSVTQVAHALKGADAAF-----VAPAITLERPKVAAHGDVACNVAMQLAKPLGTNPR 66 Query: 63 TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +AE IVA + P VD+ IAG GFINL L+ + + +++++ G +G + Sbjct: 67 QLAEKIVAALTAQPAAQGLVDAADIAGPGFINLRLTAAAKQAVIAAVFEQGRAFGTSDRE 126 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 KG +V +EFVSANPTGP+HVGH R A +GD LA+++A GY V RE+Y NDAG QI LA Sbjct: 127 KGKQVLLEFVSANPTGPLHVGHGRQAALGDVLANVIASQGYAVHREFYYNDAGVQIGNLA 186 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPI 232 +S R + L D+ PE Y G Y+ + ++ A K + + L Sbjct: 187 ISTQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNRETVAAKDGEPVTGAGDIDDLDA 245 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + DL+A ++ D + E + + +D L + G YE Sbjct: 246 IRKFAVAYLRHEQDMDLQAFGVKFDQYYLESSLY--SEGRVEKTVDALVKAGMTYE---- 299 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L R+T GDD DR + KSDG+YTYF D+AY K+ERGF + Sbjct: 300 ------------QDGALWLRTTDEGDDKDRVMRKSDGTYTYFVPDVAYHVTKWERGFTQV 347 Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 I + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+ Sbjct: 348 INIQGSDHHGTIARVRAGLQGLHVGIPKGYPDYVLHKMVTVMRDGQEVKLSKRAGSYVTV 407 Query: 411 RHVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 R +++ G D+VRF ++ RK FD +Q+ EN Sbjct: 408 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 467 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 PV+YVQYA+AR S+ ++ + D+ + L+ LAEYP ++ Sbjct: 468 PVYYVQYAHARICSVLN---ELKSRYNVDVAQLPGADLSQLTSAQAVSLMQKLAEYPDML 524 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 +A P+ +AFYL DLA FH ++ R V ++ R L+ A + Sbjct: 525 THAAKELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRNARAALLAATRQV 577 Query: 570 INSGLNIIGVESPNEM 585 + +GL ++GV +P +M Sbjct: 578 LENGLAVLGVSAPAKM 593 >gi|116671171|ref|YP_832104.1| arginyl-tRNA synthetase [Arthrobacter sp. FB24] gi|116611280|gb|ABK04004.1| arginyl-tRNA synthetase [Arthrobacter sp. FB24] Length = 554 Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats. Identities = 195/584 (33%), Positives = 311/584 (53%), Gaps = 38/584 (6%) Query: 6 DFSSRLKNYLKEIDCKIKVE---KKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + S + LK+ ++ + D + +ERP++ HG +TN A+ LS+ G++P Sbjct: 5 ELSLAMSACLKDAVAAGEITLSASAVPDEVRVERPKNRDHGDWATNIALQLSKQAGVNPR 64 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 A ++ R+ V +V IAG GF+N+ + + + +IV +G EYG N G Sbjct: 65 EFATVLSTRLATIDGVSAVDIAGPGFLNITVDAAAAGALAKAIVEAGPEYGTNSALAGHV 124 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 VN+EFVSANPTGP+H+GH R A +GD++A ++ SG +VT EYYINDAG+Q+N A SV Sbjct: 125 VNMEFVSANPTGPLHIGHTRWAALGDSIARVLRASGAKVTAEYYINDAGSQMNVFARSVL 184 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 R +PEG YPG Y+ +G + ++ + + LP+++ + +A M Sbjct: 185 SRLH------GRGVPEGGYPGEYISELGHHVLTEHPD-IRELTDVAALPVIRGAAYKAQM 237 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 K I+D L + D++ SE + H D I + L QG+V++ Sbjct: 238 KDIKDTLADFGVAFDVYFSEQELH--DAGAIESAVARLREQGHVFD-------------- 281 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 D + R+T GDD DR +++++G TYFAAD AY+ K +RGFD IY++G+DH G Sbjct: 282 --DGGAVWLRTTDFGDDKDRVMIRANGEPTYFAADAAYYLSKKDRGFDQKIYLLGADHHG 339 Query: 363 YVKRLEAVAAAVSEKK-AQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDS 421 Y+ RL+A+AAA + A I VL+ +LV + K+SKRAG+ I L+ ++ +G D+ Sbjct: 340 YINRLKAIAAAAGDDPEANIEVLIGQLVSV----NGAKLSKRAGNIIELKDLISWLGKDA 395 Query: 422 VRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFP 481 VR+ + L D +K+ S ENPVFYVQYA+AR R R A + D Sbjct: 396 VRYSLARFPADSPLTLDPELLKKHSNENPVFYVQYAHARSRGTARNAVAAGVERRVD--G 453 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 ++ +E +L+ +L YP ++ A +EP+++A +L +A +H + R Sbjct: 454 KDAFDASLLDHATENELLSYLGSYPSIVAKAAELREPHRVARHLEVIAGAYHRWYDACRV 513 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P+ + RL L A + ++ +GL ++GV +P M Sbjct: 514 APQG---DEPITDVNRTRLWLNDATSQVLANGLELLGVSAPERM 554 >gi|167585288|ref|ZP_02377676.1| arginyl-tRNA synthetase [Burkholderia ubonensis Bu] Length = 598 Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats. Identities = 196/616 (31%), Positives = 308/616 (50%), Gaps = 62/616 (10%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 L AD ++ + LK D + I +ERP+ AHG ++ N AM L++PLG +P Sbjct: 12 LLADSVKQVAHALKGADAANADVAFVAPAITLERPKVAAHGDVACNVAMQLAKPLGANPR 71 Query: 63 TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +AE IVA + P V++ IAG GFINL L+ + + ++++++ G +G + Sbjct: 72 QLAEQIVAALTAQPGAQGLVEAAEIAGPGFINLRLTAAAKQAVIAAVLAEGRGFGLSTRE 131 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 G +V +EFVSANPTGP+HVGH R A +GD LA+++A G V RE+Y NDAG QI LA Sbjct: 132 HGKRVLLEFVSANPTGPLHVGHGRQAALGDALANVIASQGCAVHREFYYNDAGVQIGNLA 191 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL------ADKYSSELLNFPEEKWLPI 232 +S R + L D+ PE Y G Y+ + ++ A K + + + L Sbjct: 192 ISTQARAR-GLKPGDAGWPEAAYNGEYIADIARDYLNGETVAAKDGEPVKGAGDVEDLEA 250 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + DL+A ++ D + E ++ + +D L + G YE Sbjct: 251 IRKFAVAYLRHEQDMDLQAFGVKFDQYYLESSLYK--EGRVEQTVDALIKAGVTYE---- 304 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L R+T GDD DR + K+DG+YTYF D+AY K+ERGF + Sbjct: 305 ------------QDGALWLRTTDNGDDKDRVMRKTDGTYTYFVPDVAYHVTKWERGFTKV 352 Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 I + GSDH G + R+ A + K + +L ++V + RDG +K+SKRAG ++T+ Sbjct: 353 INIQGSDHHGTIARVRAGLQGLHIGIPKGYPDYVLHKMVTVMRDGQEVKISKRAGSYVTV 412 Query: 411 RHVVDE---------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKEN 449 R +++ G D+VRF ++ RK FD +Q+ EN Sbjct: 413 RDLIEWSGGAAPGQEAAPDLIDEATITRGRDAVRFFLISRKADTEFVFDIDLALKQNDEN 472 Query: 450 PVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVI 509 PV+YVQYA+AR S+ + K + + +L T L+ LAEYP ++ Sbjct: 473 PVYYVQYAHARICSVLNEWKSRY---NGELAQLPGADLSQLTSTQAASLMQKLAEYPDML 529 Query: 510 ENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASI 569 +A P+ +AFYL DLA FH ++ R V ++ R L+ A + Sbjct: 530 SHAANELAPHAVAFYLRDLAGEFHSFYNAER-------VLVDDEAPRTARAALLAATRQV 582 Query: 570 INSGLNIIGVESPNEM 585 + +GL ++GV +P +M Sbjct: 583 LENGLAMLGVSAPAKM 598 >gi|317057061|ref|YP_004105528.1| arginyl-tRNA synthetase [Ruminococcus albus 7] gi|315449330|gb|ADU22894.1| arginyl-tRNA synthetase [Ruminococcus albus 7] Length = 586 Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats. Identities = 190/607 (31%), Positives = 301/607 (49%), Gaps = 54/607 (8%) Query: 4 FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 FA + L ++ + + + IE P D +G +STNAAM+ ++P P Sbjct: 9 FAQARELVLKALGQLVAEEVFPAEAVPAFNIEIPADPKNGDVSTNAAMVCAKPFRSAPRK 68 Query: 64 IAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 IAE IV +I D V IAG GFIN Y + ++ +++ G EYG+ GKG + Sbjct: 69 IAEAIVGKIDTTGSCFDKVEIAGPGFINFYYGKGWFGSVVKAVLDEGKEYGKTDFGKGKR 128 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 +EFVSANPTGPMH+G+ R +GD LA++M ++GY+V RE+YINDAG QI S+ Sbjct: 129 ALVEFVSANPTGPMHIGNARGGAIGDCLAAVMEYAGYDVEREFYINDAGNQIEKFGKSLR 188 Query: 183 WRYQQALYNNDSDL-----------------------PEGYYPGVYLKHVGKELADKYSS 219 RY Q + ++ P+ Y G+ + K D+Y Sbjct: 189 LRYMQICGDKGQEIVAKNLDMDTFCKTIYEDTETFPMPDDVYLGMDIIAHAKNFFDEYGM 248 Query: 220 ELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDN 279 PEE+ + DY++ + + DL I +D + E H + ++++ID Sbjct: 249 IASAQPEEECKKALVDYALPKNIDGLHKDLAKYRINYDTWFRESTLH--NDGSVQEVIDK 306 Query: 280 LARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLA 339 L GY YE L FR+T GD+ DR L++ +G TYF D+A Sbjct: 307 LKAGGYTYE----------------KDGALWFRTTDFGDEKDRVLVRDNGIPTYFVPDIA 350 Query: 340 YFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 Y K R FD I + G+DH GY+ RL+A A+ + ++++++ ++VRL +DG Sbjct: 351 YHYNKLAVRKFDKAIDIFGADHHGYIPRLKAAMTALGVDEKKLDIVIMQMVRLVKDGETY 410 Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 K+SKR+G ITL +++E+ D+ RF R+ + DFD S +NPV+YVQYA+ Sbjct: 411 KLSKRSGKAITLNTLLEEIPIDAARFFFNLREPNSQFDFDLDLAISNSSQNPVYYVQYAH 470 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEP 518 AR S+ ++ K+ + + P E+ EL+L+ +A P I A A +P Sbjct: 471 ARICSVIKKLKEE----NIEAKPFTADMAEALSTPEELELVKLMATLPTTITEAAKAYDP 526 Query: 519 YKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIG 578 K+ Y D+A+++H ++ R ++ + RL L AV II + L+++ Sbjct: 527 AKVTKYAVDIATLYHKFYNACR-------IKGEEENVMQARLALSLAVKQIIANILDMLK 579 Query: 579 VESPNEM 585 ++ P M Sbjct: 580 IDCPESM 586 >gi|160896118|ref|YP_001561700.1| arginyl-tRNA synthetase [Delftia acidovorans SPH-1] gi|238687178|sp|A9BRF4|SYR_DELAS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|160361702|gb|ABX33315.1| arginyl-tRNA synthetase [Delftia acidovorans SPH-1] Length = 565 Score = 511 bits (1316), Expect = e-142, Method: Composition-based stats. Identities = 182/595 (30%), Positives = 295/595 (49%), Gaps = 60/595 (10%) Query: 16 KEIDCKIKVEKKILD-----RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 +E+ + E + L R E P+ AHG + AAM L++PL L+P ++ E + A Sbjct: 6 QELLAALAGELETLSPGAGARAAFESPKVAAHGDFACTAAMQLAKPLKLNPRSLGEQLKA 65 Query: 71 RIKIDP----DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 ++ P VD++ IAG GF+N+ L P+ ++I+ ++ ++G L +G K+ +E Sbjct: 66 ALEATPSFQRWVDAIEIAGPGFLNIRLKPAAKQQIIREVLEQAEKFG-WLADRGAKMLVE 124 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+HVGH R A +GD + +L A G+ V RE+Y NDAG QI+TL S R Sbjct: 125 FVSANPTGPLHVGHGRQAALGDAICNLYATQGWGVHREFYYNDAGVQIDTLTKSTQLR-A 183 Query: 187 QALYNNDSDLPEG--------YYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIV 233 + D P +Y G Y++ + + E + + + Sbjct: 184 KGFKPGDECWPIDPENPASKAFYNGSYIQDIADDFLACKTVKADDREFTANGDVEDYDNI 243 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 + ++V + DL+A N+ D + E + + D + L G+ YE Sbjct: 244 RQFAVAYLRNEQDKDLQAFNLHFDEYYLESSLYTN--GYVEDAVQRLIAGGHTYEL---- 297 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353 L +ST GDD DR + K DG+YTYF D+AY K++RG+ ++ Sbjct: 298 ------------DGALWLKSTDYGDDKDRVMRKQDGNYTYFVPDVAYHIQKFKRGYSKVV 345 Query: 354 YVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 + G+DH G + R+ A A V + +L +VR+ R G +K+SKRAG ++TLR Sbjct: 346 NIQGTDHHGTIARVRAGLQAADVGIPAGYPDYVLHTMVRVVRGGEEVKISKRAGSYVTLR 405 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIF-RQAKD 470 +++ D+VRF +L RK FD Q+ +NPV+YVQYA+AR S+ D Sbjct: 406 DLIEWTSKDAVRFFLLSRKPDTEYTFDVDLAVAQNNDNPVYYVQYAHARICSVLAAWGGD 465 Query: 471 IFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLAS 530 D DL L++ LA+YP ++ +A P+ + FYL +LAS Sbjct: 466 AATLKDVDLSALEG--------PQAQALMLQLAKYPAMLTSAAEGNAPHDVTFYLRELAS 517 Query: 531 VFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 ++H ++ R + ++ K+ + RL L+ A ++++GL ++GV +P M Sbjct: 518 LYHSYYDAER-------ILVDDEKVKLARLALISATRQVLHNGLAVLGVSAPQRM 565 >gi|148244251|ref|YP_001218945.1| arginyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA] gi|166200585|sp|A5CXW2|SYR_VESOH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|146326078|dbj|BAF61221.1| arginyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA] Length = 572 Score = 511 bits (1315), Expect = e-142, Method: Composition-based stats. Identities = 191/599 (31%), Positives = 310/599 (51%), Gaps = 70/599 (11%) Query: 17 EIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDP 76 E+ + + + + I ++ +D A G ++N AM+LS +A+ I A Sbjct: 14 EVLMDNNILESMPENIRVDHSKDKAQGDFASNIAMLLSEQAQCSSKVLAQKIKANFPDSV 73 Query: 77 DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPM 136 DV+ + I G GFIN ++S S ++ I+ G YG + IG G +V +EFVSANPTGP+ Sbjct: 74 DVEKIEIVGPGFINFFMSQSSNALVVEDIIKQGGNYGLSNIGMGQRVLLEFVSANPTGPL 133 Query: 137 HVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDL 196 HVGH R G +A L+ G+EV EYY+NDAG Q++ LA+SV+ RY + Sbjct: 134 HVGHGRGVAYGAAVAHLLRAVGFEVDCEYYVNDAGRQMDILAISVYLRYVET-----EQF 188 Query: 197 PEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLP-------------------- 231 P+ Y G Y+ + K++ D +++ + E K Sbjct: 189 PDNCYKGDYIFDIAKKISGVKKLDIFTNTCKDTSEWKVQKNSIDKERYIDDLIANCKLQL 248 Query: 232 -----IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286 V D+++ +++ I+ DL +++ + SE D +I+ L GY+ Sbjct: 249 GSDYRKVFDFAINSILSDIKIDLADFGVEYHQWFSEQSLV--DSGLSEEIVKKLQDLGYI 306 Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346 YE L FR+T GDD+DR +++ +G +TYF+ D+AY K+E Sbjct: 307 YE----------------KEGALWFRTTDFGDDLDRVVVRDNGIHTYFSYDIAYHLGKFE 350 Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGD 406 RG+D +I + G+DH GY+ R++A A++ ++ +LL + V L+RDG + MS R+G Sbjct: 351 RGYDRIINIWGADHHGYIARVKASIKALNYNPDKLEILLVQFVNLFRDGKKVSMSTRSGS 410 Query: 407 FITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFR 466 FITL+ + +EVG+D VRF + RK+++ +DF+ K +S ENPVFY+QYAY R S+ + Sbjct: 411 FITLKELREEVGNDVVRFFYILRKSTQHMDFNLDLAKSKSNENPVFYIQYAYVRICSVLK 470 Query: 467 QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLY 526 Q D+D + + E LI L Y +++++ + EP+ LA YL Sbjct: 471 QGMPFMADIDLLVLNNEL----------ETLLIKELNRYKDILQSSALNYEPHVLACYLR 520 Query: 527 DLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 LA FH ++++ ++ KL RL L+ AV I+ +GLN++G+ +PN M Sbjct: 521 KLAGYFHSYYNNCEF-------LVDDDKLRNSRLLLITAVQQILANGLNLLGISTPNSM 572 >gi|326315293|ref|YP_004232965.1| arginyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372129|gb|ADX44398.1| arginyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 604 Score = 511 bits (1315), Expect = e-142, Method: Composition-based stats. Identities = 185/627 (29%), Positives = 297/627 (47%), Gaps = 78/627 (12%) Query: 11 LKNYLKEIDCKI--KVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68 +K L K+ R E P+ AHG + AAM L++PL L+P + E + Sbjct: 4 VKQELLAALAGELDKLSPGAAGRAAFESPKVAAHGDFACTAAMQLAKPLKLNPRALGEQL 63 Query: 69 VARIKIDP----DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 A ++ P VD++ IAG GF+N+ L + ++I+ ++ +G +G G +V Sbjct: 64 KAALEATPAFARWVDAIEIAGPGFLNIRLKAAAKQEIVREVLAAGDRFGYQK-DNGQRVL 122 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGP+HVGH R A +GD + +L A G+ V REYY NDAG QI TLA S R Sbjct: 123 VEFVSANPTGPLHVGHGRQAALGDAICNLFATQGWSVHREYYYNDAGVQIETLAKSTQLR 182 Query: 185 YQ-----QALYNNDSDLP--EGYYPGVYLKHVGKELADK-----YSSELLNFPEEKWLPI 232 + + D + P + +Y G Y++ + + K + + Sbjct: 183 AKGFKPGDECWPTDPENPASKAFYNGEYIQDIANDFLAKKTVQAEDRAFTANGDVEDYDN 242 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + DL+A N+ D + E + + + L +G+ YE Sbjct: 243 IRQFAVAYLRNEQDKDLRAFNLHFDQYYLESSLYT--SGRVEATVKRLVEKGHTYE---- 296 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L RST GDD DR + K DG+YTYF D+AY K+ERGF + Sbjct: 297 ------------QDGALWLRSTDYGDDKDRVMRKKDGTYTYFVPDVAYHISKWERGFAKV 344 Query: 353 IYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 + + G+DH G + R+ A A V + + +L +VR+ + G +K+SKRAG ++TL Sbjct: 345 VNIQGTDHHGTIARVRAGLQAADVGIPQGYPDYVLHTMVRVVKGGEEVKISKRAGSYVTL 404 Query: 411 RHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA-- 468 R +++ D+VRF +L RK FD Q+ +NPV+YVQYA+AR +S+ R A Sbjct: 405 RDLIEWTSKDAVRFFLLSRKPDTEYTFDVDLAVAQNNDNPVYYVQYAHARIQSVLRAAVA 464 Query: 469 --------------------------KDIFPDLDFDLFPRNVIPQESEFDTSE----LQL 498 + D + ++ E L Sbjct: 465 HARGDRPDVSGGQLEKLSAPDALNDVGEHVTDTSLSSACELLDLGNADLSPLEGQQAQAL 524 Query: 499 IVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMM 558 ++ LA+YP ++ A + P+ + FYL DLA+ +H ++ R + ++ + Sbjct: 525 MLQLAKYPEMLAAAAEGEAPHDVTFYLRDLAASYHSYYDAER-------ILVDDEAVKRA 577 Query: 559 RLQLVHAVASIINSGLNIIGVESPNEM 585 RL LV A A ++++GL ++GV +P M Sbjct: 578 RLALVAATAQVLHNGLAVLGVSAPARM 604 >gi|171060897|ref|YP_001793246.1| arginyl-tRNA synthetase [Leptothrix cholodnii SP-6] gi|238689094|sp|B1XYP5|SYR_LEPCP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|170778342|gb|ACB36481.1| arginyl-tRNA synthetase [Leptothrix cholodnii SP-6] Length = 561 Score = 511 bits (1315), Expect = e-142, Method: Composition-based stats. Identities = 182/562 (32%), Positives = 288/562 (51%), Gaps = 41/562 (7%) Query: 35 ERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARI----KIDPDVDSVFIAGKGFIN 90 E P+ AHG L+ AAM L+RPL +P +A+ +V + VD++ +AG GFIN Sbjct: 30 ENPKQAAHGDLAITAAMQLARPLRKNPRELAQALVEALGRQPAAQKWVDAMELAGPGFIN 89 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 L L P+ ++++S+++ +G G +V +EFVSANPTGP+HVGH R A +GD + Sbjct: 90 LRLKPAARQQVVSAVLSQREGFGVRAP-NGQRVMVEFVSANPTGPLHVGHGRQAALGDAI 148 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 ++ A G+ V RE+Y NDAG QI TLA S R + L D++ P Y G Y+ + Sbjct: 149 CNVFATQGWAVHREFYYNDAGVQIGTLASSTQCR-LRGLKPGDAEWPASAYNGDYIADIA 207 Query: 211 KEL-----ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDF 265 +E E + + ++ ++V + DL+A ++ D + E Sbjct: 208 REFLAGATVKADDRAFTASGEVEDIDSIRQFAVAYLRHEQDLDLQAFGVRFDHYYLESGL 267 Query: 266 HRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLL 325 + + + + L G +E + L RST GDD DR + Sbjct: 268 Y--SSGRVEEAVAKLTAAGKTFE----------------EGGALWLRSTDYGDDKDRVMK 309 Query: 326 KSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQINV 383 KSDG+YTYF D+AY K+ERGFD +I + GSDH G + R+ A A V + + Sbjct: 310 KSDGTYTYFVPDVAYHIHKWERGFDKVINIQGSDHHGTIARVRAGLQAAGVGVPQGWPDY 369 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443 +L ++V + + G +K+SKRAG ++TLR ++D D+VRF ++ RK FD Sbjct: 370 VLHKMVTVMKGGEEVKISKRAGSYVTLRDLIDWTSRDAVRFFLISRKADTEFVFDVDLAL 429 Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503 + + ENPV+YVQYA+AR S+ + + DL + +E L+ LA Sbjct: 430 KANDENPVYYVQYAHARVCSVLARYVEEHQG---DLATLADADLSLLAEPTEFALMNKLA 486 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 EYP ++ A P+ +AFYL DLA+ +H ++ +RF+ + R+ L+ Sbjct: 487 EYPEMLGAAAADLAPHNVAFYLRDLAAHYHSYYGA------VRFLDGAVEPMR-ARMALL 539 Query: 564 HAVASIINSGLNIIGVESPNEM 585 A A ++ + L ++GV +P +M Sbjct: 540 EATAQVLRNALAVLGVSAPRKM 561 >gi|83816551|ref|YP_445118.1| arginyl-tRNA synthetase [Salinibacter ruber DSM 13855] gi|109895033|sp|Q2S3W3|SYR_SALRD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|83757945|gb|ABC46058.1| arginyl-tRNA synthetase [Salinibacter ruber DSM 13855] Length = 562 Score = 511 bits (1315), Expect = e-142, Method: Composition-based stats. Identities = 190/598 (31%), Positives = 305/598 (51%), Gaps = 59/598 (9%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 ++++ L + V I +E P HG L+TN A+ L+ LG +P +IAE Sbjct: 5 LRTQIRRVLDAL---GDVPDDF--EIELEAPDRPEHGDLATNTALRLASVLGDNPRSIAE 59 Query: 67 LIVARIKI---DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 + R++ + SV +AG GF+N + YL L+ ++ G +G+ G G + Sbjct: 60 TLAERLRERVDPARIKSVEVAGPGFVNFRFAQDYLFDGLADLLAQGDTFGQTDAGAGERA 119 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +E+VSANPTGP++VGH R AV+GDT+A+L+A++GY+VTREYY NDAG Q+ LA SV Sbjct: 120 LVEYVSANPTGPLNVGHGRNAVLGDTIANLLAWTGYDVTREYYYNDAGRQMRVLAQSVRA 179 Query: 184 RYQQALYNN----------------DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227 RY +AL N PE Y G Y+ + + L D++ L + Sbjct: 180 RY-EALAGNVPTTTLTLDDDTTVEVPETFPEDGYLGQYIVEIAQALYDEHGDALCATDD- 237 Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287 L + + A+ I L+ALNI D + +E H D + ++D LA GY Y Sbjct: 238 --LAPFRAAAETAIFGDIEATLRALNIDMDGYANEQALH--DEGRVDAVLDGLADAGYTY 293 Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347 E + L F++T G + D L+K G TY D+AY K+ER Sbjct: 294 E----------------EDGALWFKTTEFGTEDDTVLVKQTGEPTYRTPDIAYHTAKFER 337 Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407 GFD M+ V G+DH + + + +++V+L + V L R P+KMS R ++ Sbjct: 338 GFDLMVDVFGADHHAAYPDVLSALDVLGYDTDRVDVILYQFVTLVRGDEPVKMSTRRANY 397 Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467 +TL ++++VG+D RF L R L+FD +E+S++NPVFY+QYA+AR S+ + Sbjct: 398 VTLDDLIEQVGADVTRFFFLMRSPDTHLNFDLELAEEESEKNPVFYLQYAHARICSVLDK 457 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 A+++ D D E+ LI L +PR ++NA A+ P+ + YL D Sbjct: 458 AEEVGFSHDED------ADLALLTHEDEIALIKELLRFPRELQNAADARAPHFVPNYLRD 511 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +A+ F + + R + ++L R++L A +++ +GL ++G+ +P +M Sbjct: 512 VATAFSQFYDNCR-------IIGEEQELASARMRLALAAKTVLKNGLTVLGISAPRQM 562 >gi|289706375|ref|ZP_06502733.1| arginine--tRNA ligase [Micrococcus luteus SK58] gi|289556870|gb|EFD50203.1| arginine--tRNA ligase [Micrococcus luteus SK58] Length = 556 Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats. Identities = 194/588 (32%), Positives = 309/588 (52%), Gaps = 44/588 (7%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKI-----LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 D S+ L L + + ++ R+ +ERPR HG +TN A+ L + G+ Sbjct: 5 DLSALLSAVLTDAVDAGDLPAELRGEITPARVKVERPRSREHGDWATNVALQLGKKAGMA 64 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A L+ R+ P + +V +AG GF+N+ L + + IV +G EYGRN G Sbjct: 65 PRDLAGLVAERLTGKPGIAAVDVAGPGFLNVTLDAASAGALAREIVEAGPEYGRNDALAG 124 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 VN+EFVSANPTGP+H+GH R A +GD +A L+ SG +VT EYY+NDAG Q+N A S Sbjct: 125 HTVNMEFVSANPTGPLHIGHTRWAALGDAIARLLRASGADVTAEYYVNDAGNQMNVFADS 184 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V R D+P G YPG Y++ + +A ++ + +E P+V++ + + Sbjct: 185 VLARLH------GRDVPAGGYPGAYVQELADAVALEHPD-VRELTDEAARPVVREAAYRL 237 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 M+ I+D L A ++ D+F SE H D I + L QG++ Sbjct: 238 QMQDIKDTLAAFDVHFDVFTSEQTLH--DSGAIEQAVQRLREQGHI-------------- 281 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + + ++T GDD DR L++++G TYFAAD AY+ K +RGF+ +Y++G+DH Sbjct: 282 --EDREGAVWLKTTDFGDDKDRVLIRANGEPTYFAADAAYYLHKRDRGFEEKVYLLGADH 339 Query: 361 SGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 GYV RL+A+AAA + A I +L+ +L+ + K+SKRAG+ I L+ +V+ +G Sbjct: 340 HGYVNRLKAIAAAAGDDPATNIEILIGQLISV----NGAKLSKRAGNIIELKDLVEWLGR 395 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D++R+ + L D ++ + +NPV+YVQYA+AR R A+ D Sbjct: 396 DALRYDLARYPADSPLTIDPELLRSATNDNPVYYVQYAHARASGAARTAQAHGVD----- 450 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 R+ +E +L+ LAE+P V+ A +EP+++A +L +A +H ++ Sbjct: 451 --RSEFDAALLTHATESELLAQLAEFPAVVGAAARLREPHRVARHLEVIAGAYHSWYAAC 508 Query: 540 RENPRLRFVQANN--RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R P L RL L A A ++ +GL ++GV +P +M Sbjct: 509 RIVPMPTDDGTPRPVETLNRTRLWLNDATAQVLANGLGLLGVSAPEKM 556 >gi|330814070|ref|YP_004358309.1| arginyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063] gi|327487165|gb|AEA81570.1| arginyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063] Length = 566 Score = 510 bits (1313), Expect = e-142, Method: Composition-based stats. Identities = 240/586 (40%), Positives = 342/586 (58%), Gaps = 21/586 (3%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 M +F + + + LK+ EK I +E P+ + G L+ NA +IL+ + Sbjct: 1 MNIFQFYKDQFCDLLKDNKYSCNYEK-----ISVEPPKQTSFGDLAFNAPLILAAEFKKN 55 Query: 61 PLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGK 119 PL I I IK + +++ +A GFINL L ++ LS + + + Sbjct: 56 PLEIGSEIAELIKKKFKEFENIDVAKPGFINLKLKNNFWISYLSDFNT----HNKKISSS 111 Query: 120 GTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLAL 179 K+NIE+VSANPTGP+HVGHCR AV GD LA+L++F G +VT+EYYIND G QI+ + Sbjct: 112 KKKINIEYVSANPTGPLHVGHCRGAVYGDVLANLLSFVGEDVTKEYYINDYGNQIHMFSK 171 Query: 180 SVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQ 239 SVF R Q+ N L +G YPG YL + + K ++ E+ + + Sbjct: 172 SVFARIQEIKENIKFPLDQGLYPGDYLIEIANNIIKKKLITDISNYEKIKDQLGSAAMSE 231 Query: 240 AMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT 299 AM+ +I+ DL AL IQHD+FISE D D I I+ L ++ +YEG+L PK Sbjct: 232 AML-MIKSDLLALGIQHDLFISEKDLVSKD--LISKTIEILNQKQCIYEGVLAKPKGNEI 288 Query: 300 QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSD 359 + + R QLLF+ST GDDVDR L KSDG++TYFA D+AY K ER FD I V+G+D Sbjct: 289 EDWE-PRSQLLFKSTKFGDDVDRALKKSDGTWTYFANDVAYHAYKLERKFDKYINVLGAD 347 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H+GY+KRL+A A+S+ KA C+LV+L++ G P KMSKRAGDFIT + +V VG Sbjct: 348 HAGYLKRLKACVDALSDFKADFECKTCQLVKLFKSGEPYKMSKRAGDFITAKELVKAVGV 407 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+VRFMM++R N LDFDF V E++KENPVFYVQYA AR S+ R+ K FD Sbjct: 408 DAVRFMMIYRSNDSQLDFDFDLVTEKTKENPVFYVQYASARIHSVLRKTK-------FDN 460 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 E++LI L+ +P+ IE A EP+++ +YLYDL+S H +W+ G Sbjct: 461 SVFEKSHLGLLTSNVEIELIKKLSLWPKTIELAARNLEPHRIPYYLYDLSSSLHSYWNLG 520 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +E+ + ++ + L R+ L++ + S+I SGL+I+GV +P M Sbjct: 521 KEDSSFKIIENPDINLVHARVFLLNKILSVIKSGLSILGVNAPETM 566 >gi|189501392|ref|YP_001960862.1| arginyl-tRNA synthetase [Chlorobium phaeobacteroides BS1] gi|229558754|sp|B3EQ83|SYR_CHLPB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|189496833|gb|ACE05381.1| arginyl-tRNA synthetase [Chlorobium phaeobacteroides BS1] Length = 553 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 177/583 (30%), Positives = 290/583 (49%), Gaps = 34/583 (5%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 L ++K+ K + I IE+P D G STN A++L+ G++P +A+ Sbjct: 1 MREYLTEHIKQALHKASIPAS--RAIKIEKPSDSRFGDFSTNIALVLAGECGMNPRQLAQ 58 Query: 67 LIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 I + IAG GFIN YL P+++ K + I+ S +GR G+G + Sbjct: 59 KITENLSFSETTVSKTEIAGPGFINFYLEPAFIMKQVEQIITSSDRFGRGAAGEGKNAIV 118 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 E+VSANPTGP+ +G R V+GD +A+++ GY VTREYY NDAG Q++ L+ SV RY Sbjct: 119 EYVSANPTGPLTIGRGRGGVLGDCIANILEAHGYTVTREYYFNDAGRQMSILSESVRLRY 178 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245 + L + PE +Y G Y++ + + +K+ +L+ E + K + + I Sbjct: 179 IE-LCGIAVEFPETHYQGDYIREIAAAILEKHGEKLV---ESDSTELFKQTAETHIFTHI 234 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPI---RDIIDNLARQGYVYEGILPPPKSKTTQKC 302 ++ L L+I HD + +E ++ D S I + +ID L ++G++ Sbjct: 235 KNTLHRLDITHDSYFNEHRLYQEDESGISPNQQVIDALRQKGFI---------------- 278 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 D F +T +G + D+ L+KS G +Y D+AY K+ERGFD ++ + G+DH Sbjct: 279 DHYDGATWFMTTRLGQEKDKVLVKSSGEPSYRLPDIAYHVTKFERGFDEIVNIFGADHID 338 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 + + +I V + + V +G +KMS R G+ L ++D+VG+D+ Sbjct: 339 EYPDVIEALKILGYDTDRIRVAINQFVTTTVNGETVKMSTRKGNADLLDDLIDDVGADAT 398 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 R + R L+FD K+QSK+NPVFY+QYA+AR S+ R A + + Sbjct: 399 RLFFIMRSKDSHLNFDIDLAKKQSKDNPVFYLQYAHARICSLLRIA-ENEAGFSLEEGSA 457 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 + E+QL L +YP VI+ EP K+ YL+ +A ++H + +E Sbjct: 458 DAHLMGKLTSAHEIQLGFTLLDYPDVIQTCARILEPQKMVEYLHSVAELYHRFY---QEC 514 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P L+ + + RL L A ++ +G I+G+ +P M Sbjct: 515 PILK----ADPDIRSARLILSLATRQVLRNGFRILGISAPKSM 553 >gi|210632829|ref|ZP_03297562.1| hypothetical protein COLSTE_01466 [Collinsella stercoris DSM 13279] gi|210159388|gb|EEA90359.1| hypothetical protein COLSTE_01466 [Collinsella stercoris DSM 13279] Length = 619 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 189/629 (30%), Positives = 308/629 (48%), Gaps = 69/629 (10%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 ++ L + L+ +ERP D +HG ++ AM ++ P IA+ Sbjct: 10 IEELVRAALAAAQEAGDLPAFELEDCGMERPADTSHGEWTSTMAMKSAKLAHCAPRKIAD 69 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 +VA + +++ V +AG GFIN YL+ + I G ++ ++ +G G K IE Sbjct: 70 AVVAHMPESAEIEHVEVAGPGFINFYLNAAANNAIFGVAREQGRDFAKSNVGGGVKTQIE 129 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANP GPMHVGH R A +GD++ ++M +GYEV RE++IND G Q+NT S+ RY Sbjct: 130 FVSANPVGPMHVGHGRWAALGDSMCNVMQHAGYEVEREFWINDYGNQMNTFGNSISKRYM 189 Query: 187 QA---------------------------------------LYNNDSDLPEGYYPGVYLK 207 Q + +DL + Y G Y+ Sbjct: 190 QLADIMAKQGCDIDAARDFLAQDRDNYVQDEADEHLDSHPYMDEFTADLGKDSYGGTYII 249 Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 + ++ ++ + ++ Q M+K ++D + D+++SE ++ Sbjct: 250 DEAAAFWKSDGDKWVDADPQERMLSFRERGYQKMLKDMKDTCHDVRCDFDVWMSERTMYQ 309 Query: 268 GD---PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPL 324 D SP+ D L + GY+Y + L F+ST GDD DR + Sbjct: 310 KDWTGTSPVERAYDKLDKMGYLY---------------TTEDGALWFKSTAFGDDKDRVI 354 Query: 325 LKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVL 384 KS+G YTYF++D+AY K++R D ++ + G+DH GY+ R++AV A+ Q V Sbjct: 355 KKSNGDYTYFSSDIAYHWNKFQR-VDLVLDIWGADHHGYIPRVKAVCDALGY-PGQFEVP 412 Query: 385 LCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKE 444 L + V L R G P++MSKR G IT R ++DEVG+D+ R+ ++ R +++ +DFD VKE Sbjct: 413 LGQFVNLLRSGKPVRMSKRKGTMITFRELIDEVGADAARYTLVSRSSNQTIDFDIDAVKE 472 Query: 445 QSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV--------IPQESEFDTSEL 496 +S+ NPV+YVQYA+AR SI R+A + + + NV + D +EL Sbjct: 473 KSQSNPVYYVQYAHARICSILRKAAGVTFEQAELMGMENVAVKAIGANVDYSLLTDPTEL 532 Query: 497 QLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLT 556 L ++E +I + P++L Y +LA+ FH + + P + ++T Sbjct: 533 ALARKISELEDLIAGCARDRAPFRLTHYAEELAAGFHSFYQACQVLPSEG--RPVEPEVT 590 Query: 557 MMRLQLVHAVASIINSGLNIIGVESPNEM 585 RL AV S+++ L++IGV +P +M Sbjct: 591 RARLAACDAVRSVLDLVLSLIGVSAPTKM 619 >gi|154249102|ref|YP_001409927.1| arginyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1] gi|154153038|gb|ABS60270.1| arginyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1] Length = 542 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 192/575 (33%), Positives = 304/575 (52%), Gaps = 34/575 (5%) Query: 11 LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 +K ++ I +E V+E P + G STN A++ ++ P +A+ V Sbjct: 2 IKKEIESILKSFLMETGFEYDFVVEIP-EEQFGDFSTNIALVGAKYFKKAPRDVAKYFVE 60 Query: 71 RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130 ++ P D + IAG GFIN +S S+ R L + + E + K+ +E+ SA Sbjct: 61 KLNGHPMFDEITIAGPGFINFKVSKSFYRDFLDGFLRNPREIWK--FKNKGKIILEYGSA 118 Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190 NPTGP+ VGH R V+GD L +++++ GY+VT+E Y+NDAG QI LA SV+ RYQQ L Sbjct: 119 NPTGPLTVGHGRQIVIGDVLGNILSYIGYDVTKEMYLNDAGRQIKLLAKSVWARYQQLL- 177 Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLK 250 D +PE Y G Y+ + K++ Y + +E+ I + Y+++ + K+ L+ Sbjct: 178 GKDEPIPEDGYRGNYVIDIAKKVLKDYGEKFDGIWDEEVEEIFRKYALEDITKMFETTLE 237 Query: 251 ALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310 +N + D SE D +++++D L +G +YE + Sbjct: 238 KINAKFDNVYSEKSL--IDDGTVKEVLDILESKGLIYEN----------------EGAIW 279 Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 FR + +D D+ L+KSDGSYTYF D+AY K++RG+D I + GSDH G++ R+EA Sbjct: 280 FRVSDFANDNDKVLIKSDGSYTYFLTDIAYHYKKFKRGYDLAIDIFGSDHHGHLPRMEAA 339 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430 A++ + +L + V L R +KMS RAG+F+T+ ++DEVG D+ R+ Sbjct: 340 MKALNIPDDFLVFVLHQFVTLKRGNEVVKMSTRAGEFVTVDELIDEVGRDATRYFFAMVD 399 Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490 + L+FD K Q+ ENPV+YVQYA+AR S+F A L F LF E Sbjct: 400 VNTHLNFDLELAKSQTNENPVYYVQYAHARIASLFENA--TVKGLKFSLFD----NIELL 453 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550 + SE+++I ++ + ++E P+ L YL LAS FH ++S + V Sbjct: 454 ENESEMRIIKLISSFDDILERVRDKLSPHYLTDYLETLASAFHKYYS------EYKIVDQ 507 Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +N ++T RL LV AV I++ GL ++GV +P +M Sbjct: 508 DNPEMTNARLNLVFAVKIILSEGLRLLGVSTPEKM 542 >gi|255326255|ref|ZP_05367341.1| arginine--tRNA ligase [Rothia mucilaginosa ATCC 25296] gi|255296709|gb|EET76040.1| arginine--tRNA ligase [Rothia mucilaginosa ATCC 25296] Length = 554 Score = 508 bits (1308), Expect = e-141, Method: Composition-based stats. Identities = 181/586 (30%), Positives = 293/586 (50%), Gaps = 42/586 (7%) Query: 6 DFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + S + L+E ++ E L + +ERP+ HG +TN A+ L++ +G +P Sbjct: 5 ELSEAIALALEETISSGQLTLVEGAELPAVRVERPKSREHGDWATNVALQLAKKVGKNPR 64 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 A L+ +I P V SV IAG GF+N+ L + ++ ++IV +G YGR+ G Sbjct: 65 EAAALLAEKISAIPGVASVDIAGPGFLNITLDAAAAGELAATIVEAGEAYGRSDKFAGKT 124 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 +N+EFVSANPTGP+H+G R A VGD LA ++ G V REYY ND G QI+ S+ Sbjct: 125 INLEFVSANPTGPIHLGGTRWAAVGDALARVLEAEGANVVREYYFNDHGTQIDRFVRSLI 184 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 + + PE Y G Y+ + ++ + L E+ I ++ M Sbjct: 185 AAAR------GEETPEDGYAGAYIVDIKDQILAQRPDALEAENPEE---IFREIGTHLMF 235 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 I++ L A D+F E+ G + +++ + G ++E Sbjct: 236 DQIKESLAAFGTHFDVFFHENSVFEG--GKVDALLETMRENGQLFEA------------- 280 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG---FDNMIYVMGSD 359 R+T GDD DR ++KSDG++ Y A D+AY++ K R D IY++G+D Sbjct: 281 ---DGAWWMRTTDYGDDKDRVVIKSDGNHAYVAGDIAYYQDKMTRAVNPADVAIYMLGAD 337 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H+GYV RL+A+A + + QI V++ +LV L +DG P++MSKRAG +TL +V+ VG Sbjct: 338 HNGYVGRLKAIAQILGYRADQIEVMIGQLVNLVKDGKPVRMSKRAGTVVTLEDLVEAVGV 397 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + +D D + +S ENPV+YVQYA+A R A + + Sbjct: 398 DAARYELTRYSVDTPIDIDLGLLTSKSNENPVYYVQYAHA------RTAAVARNAAEAGV 451 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + ++ +L+ L ++P + +A EP+++ YL LAS +H + Sbjct: 452 KVEDGVDTSLLDSAADGELLAVLGQFPAAVRDAAKFYEPHRVNRYLEQLASAYHSWYGVS 511 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R P+ L RL L +A ++ +GLN++GV +P M Sbjct: 512 RVAPK---ADEEVTDLHRTRLLLNNAAQQVLANGLNLLGVSAPERM 554 >gi|239617808|ref|YP_002941130.1| arginyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1] gi|239506639|gb|ACR80126.1| arginyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1] Length = 542 Score = 507 bits (1307), Expect = e-141, Method: Composition-based stats. Identities = 186/579 (32%), Positives = 282/579 (48%), Gaps = 38/579 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 LKN +K + + +++ + +E P + G STN A +L++ L P IAE Sbjct: 2 IKELLKNDIKRVVSDLGIDE--VPDFKVEIPPE-EFGDYSTNVAFLLTKKLRKSPKMIAE 58 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 + R V V +AG GFIN L+ S RK L IV + + + T + E Sbjct: 59 ELSGRFSELEYVLKVTVAGPGFINFVLNDSIYRKSLFHIVDNPRFWEKE---GDTLIQFE 115 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 F SANPTGP +GH R + GD L ++ GY V RE YINDAG QI L S++ RY Sbjct: 116 FGSANPTGPYTIGHGRQLIFGDVLCNVFQARGYRVHREMYINDAGRQIKLLGRSLWVRYN 175 Query: 187 QALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIR 246 + L+ + +LPE Y G YL + +EL Y ++ + + K Y+V +M+ ++ Sbjct: 176 E-LFGKEYELPEDGYRGEYLIDLAEELKISYGDRFVDRWDSEIEEFFKSYAVGKIMEGMK 234 Query: 247 DDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDR 306 + L+ L + D + SE D + +I+ G Y Sbjct: 235 ESLERLGMSFDNYFSEKSLV--DDGSVEEILRKFDEMGLTYR----------------KD 276 Query: 307 KQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKR 366 L F + DD D+ L++SDG+YTYF D+AY KY+RG+ + G+DH G++ R Sbjct: 277 GALWFAVSKFVDDDDKVLVRSDGTYTYFLTDIAYHYNKYKRGYRRAYDIWGADHMGHIPR 336 Query: 367 LEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMM 426 + A A+ + ++ + V + R G IKMS R G F TL +V+ VG D+ R+ Sbjct: 337 MRAAMKALGIADDFLYFIIHQYVNIKRGGEVIKMSTRKGQFSTLDELVESVGKDATRYFF 396 Query: 427 LWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIP 486 + FD K+++ ENPVFYVQYA+AR SIFR A LD Sbjct: 397 AMFDPDTHMLFDIDLAKKKNNENPVFYVQYAHARIASIFRTASQRGMKLD-------TRI 449 Query: 487 QESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLR 546 E + E +LI L +P +++ T + +L YL LA FH ++ Sbjct: 450 PEVLMNEEEKRLIKQLGNFPEILDQITEDYKTNRLTNYLESLAGAFHAFYNKH------V 503 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V A++ +L+M RL L AV ++++ GL++IGV +P M Sbjct: 504 VVDADSPELSMFRLTLCKAVKNVLSDGLSLIGVSAPESM 542 >gi|283782705|ref|YP_003373459.1| arginine--tRNA ligase [Gardnerella vaginalis 409-05] gi|283441291|gb|ADB13757.1| arginine--tRNA ligase [Gardnerella vaginalis 409-05] Length = 598 Score = 507 bits (1307), Expect = e-141, Method: Composition-based stats. Identities = 178/624 (28%), Positives = 309/624 (49%), Gaps = 76/624 (12%) Query: 7 FSSRLKNYLKEIDCKIKVEK------KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 S ++ K++ K +++ + RP+D AHG +TN AM L++ G+ Sbjct: 6 LSELIEKIAKDLVASGKAGNLTEDLIPAAEKLAVMRPKDRAHGDWATNVAMQLAKKAGMK 65 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AEL R++ + V +AG GFIN+ L + ++ ++ G +G+N G Sbjct: 66 PRDLAELFAERLQEAEGIARVEVAGPGFINITLDSASAAAVVDEVLKQGAAFGKNTHLSG 125 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +N+EFVSANPTGP+H+G R A VGD++A ++ +G +V REYY ND G QIN A S Sbjct: 126 KTLNLEFVSANPTGPIHIGGTRWAAVGDSMARVLEANGAKVVREYYFNDHGEQINRFAKS 185 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN----------------- 223 + + P Y G Y+ + + + +++ ++ Sbjct: 186 LVAAAH------GEETPADGYKGAYINEIADSVIKEANADGVDVLSLPRIDLGKDEEGLP 239 Query: 224 --FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281 + + + +V M IR ++ + D++ E+ + + + I +L Sbjct: 240 LGEGDSEQREEFRKRAVPMMFAEIRKSMRDFRVSFDVWFHENSLY--EDGEVERAIADLR 297 Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341 +G ++E F ST GDD DR ++KSDG+Y YFAAD+AY+ Sbjct: 298 ERGDIFE----------------KDGATWFESTKHGDDKDRVIIKSDGNYAYFAADIAYY 341 Query: 342 KCKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMP 397 + K R D IY++G+DH GY+ R+ A+ AA +K + + +L+ +LV + +DG P Sbjct: 342 RNKRHREQNPADVAIYMLGADHHGYIGRMMAMCAAFGDKPGENMQILIGQLVNVMKDGKP 401 Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457 ++MSKRAG+ IT+ +VD +G D+ R+ + + +D D + S +NPV+YVQYA Sbjct: 402 VRMSKRAGNVITIDDLVDAIGVDASRYSLARTDYNTSVDIDLDLLASHSNDNPVYYVQYA 461 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 +AR ++ R A D + D +++ E++ +++ LA++P + A + Sbjct: 462 HARSCNVARNAADAG--ITQDGADLSLLNTETDG-----EVLAALAQWPAALAQAGDLRA 514 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENP----------------RLRFVQANNRKLTMMRLQ 561 P+++A YL DLA+ +H ++ R P R + RL+ Sbjct: 515 PHRVAHYLEDLAASYHKWYNLERVVPMELTDPENRLPEAEREAQRIAKCPEPARAAARLK 574 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 L AV ++I +GL+++GV +P +M Sbjct: 575 LNAAVRTVIATGLDLLGVSAPEKM 598 >gi|283458341|ref|YP_003362963.1| arginyl-tRNA synthetase [Rothia mucilaginosa DY-18] gi|283134378|dbj|BAI65143.1| arginyl-tRNA synthetase [Rothia mucilaginosa DY-18] Length = 554 Score = 507 bits (1306), Expect = e-141, Method: Composition-based stats. Identities = 181/586 (30%), Positives = 293/586 (50%), Gaps = 42/586 (7%) Query: 6 DFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + S + L+E ++ E L + +ERP+ HG +TN A+ L++ +G +P Sbjct: 5 ELSEAIALALEETISSGQLTLVEGAELPAVRVERPKSREHGDWATNVALQLAKKVGKNPR 64 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +A L+ +I V SV IAG GF+N+ L + ++ ++IV +G YGR+ G Sbjct: 65 EVAALLAEKIGAIAGVASVDIAGPGFLNITLDAAAAGELAATIVEAGEAYGRSDKFAGKT 124 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 +N+EFVSANPTGP+H+G R A VGD LA ++ G V REYY ND G QI+ S+ Sbjct: 125 INLEFVSANPTGPIHLGGTRWAAVGDALARVLEAEGANVVREYYFNDHGTQIDRFVRSLI 184 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 + + PE Y G Y+ + ++ + L E+ I ++ M Sbjct: 185 AAAR------GEETPEDGYAGAYIVDIKDQILAQRPDALEAENPEE---IFREIGTHLMF 235 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 I++ L A D+F E+ G + ++D + G ++E Sbjct: 236 DQIKESLAAFGTHFDVFFHENSVFEG--GKVDALLDAMRENGQLFEA------------- 280 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG---FDNMIYVMGSD 359 R+T GDD DR ++KSDG++ Y A D+AY++ K R D IY++G+D Sbjct: 281 ---DGAWWMRTTDYGDDKDRVVIKSDGNHAYVAGDIAYYQDKMTRAVNPADVAIYMLGAD 337 Query: 360 HSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 H+GYV RL+A+A + + QI V++ +LV L +DG P++MSKRAG +TL +V+ VG Sbjct: 338 HNGYVGRLKAIAQILGYRADQIEVMIGQLVNLVKDGKPVRMSKRAGTVVTLEDLVEAVGV 397 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D+ R+ + +D D + +S ENPV+YVQYA+A R A + + Sbjct: 398 DAARYELTRYSVDTPIDIDLGLLTSKSNENPVYYVQYAHA------RTAAVARNAAEAGV 451 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 + + ++ +L+ L ++P + +A EP+++ YL LAS +H + Sbjct: 452 KVEDGVDTSLLDSAADGELLAVLGQFPAAVRDAAKFYEPHRVNRYLEQLASAYHSWYGVS 511 Query: 540 RENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R P+ L RL L +A ++ +GLN++GV +P M Sbjct: 512 RVTPK---ADEAVTDLHRTRLLLNNAAQQVLANGLNLLGVSAPERM 554 >gi|58697380|ref|ZP_00372706.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila simulans] gi|58536220|gb|EAL59776.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila simulans] Length = 494 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 234/510 (45%), Positives = 327/510 (64%), Gaps = 17/510 (3%) Query: 31 RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFIN 90 ++E P + AHG + TN AM+L++ +P+ IAE++ ++ +V V IAG GFIN Sbjct: 2 NFIVEPPSNRAHGDIYTNVAMVLAKHEKKNPIEIAEVLAKEFELFDEVAKVEIAGPGFIN 61 Query: 91 LYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTL 150 ++L IL I E+G IG +N+EFVSANPTGP+H+GH R AV GD L Sbjct: 62 IHLKIKVWHGILKQINELKTEFGTLDIGNNQAINVEFVSANPTGPLHIGHARGAVFGDVL 121 Query: 151 ASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVG 210 A+L+ GY+VT+EYYINDAGAQI+TL SV+ RY++AL + +G YPG YLK +G Sbjct: 122 ANLLKKVGYKVTKEYYINDAGAQIDTLIKSVYLRYKEAL-GEKISIEKGLYPGEYLKPIG 180 Query: 211 KELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDP 270 + LA KY E L + + I+++Y++ ++++I++D+ L + HD+F SE + + Sbjct: 181 EGLAKKYGKEFLKKQDNQ---IIREYTLSFILELIKEDMNLLGVNHDVFTSEYELQK--S 235 Query: 271 SPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGS 330 I + I L+ +G VYEG L PK K ++ RK++LFRST GDDVDR L K GS Sbjct: 236 GKIEESIKILSDKGLVYEGYLEKPKGKESENWT-SRKEMLFRSTKFGDDVDRALKKDGGS 294 Query: 331 YTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 +TYFA+D+AY K RGF+NMI +GSDH GYVKRL+AV +A+S+ +A+I V L +V Sbjct: 295 WTYFASDIAYHFDKISRGFNNMIVELGSDHGGYVKRLKAVVSALSDDQAKIEVKLHNIVN 354 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 + +G P+KMSKR+G+F+T R VV+EVG D RF+ML RKN +LDFDF KVKEQSK+NP Sbjct: 355 FFENGKPVKMSKRSGNFLTARDVVEEVGRDITRFIMLTRKNDMVLDFDFAKVKEQSKDNP 414 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 +FYVQYA+AR S+ R A P D L EL LI LA++P V+E Sbjct: 415 IFYVQYAHARAHSLMRNAPKELPTADPSLLRTGG----------ELFLIKTLAKWPDVVE 464 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGR 540 A EP+++ FYL ++A FH W +G+ Sbjct: 465 IAARLCEPHRITFYLLEVAEAFHVLWGYGK 494 >gi|37523848|ref|NP_927225.1| arginyl-tRNA synthetase [Gloeobacter violaceus PCC 7421] gi|39932048|sp|Q7NDF6|SYR_GLOVI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|35214854|dbj|BAC92220.1| arginyl-tRNA synthetase [Gloeobacter violaceus PCC 7421] Length = 601 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 181/605 (29%), Positives = 299/605 (49%), Gaps = 37/605 (6%) Query: 6 DFSSRLKNYLKEIDCKIKVEK--KILDR--IVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 + + L ++ + ++ R +V+E+P+ HG +T AM L++P L P Sbjct: 9 QLAESIYTALGTAFEAGQLGQLTQLPPRQSVVVEKPKVPEHGDYATPVAMSLAKPCRLAP 68 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 L IAE I + + D V +A GFINL L ++ L +I+ +YGR + + Sbjct: 69 LAIAEAIASYLASDEI--GVEVAKPGFINLRLGHRFVAVELQNILELKGDYGRTVPQQPE 126 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 ++ +EFVSANPTGP+H+GH R A +G +L ++ F+GY V E+YINDAG Q+ L LS+ Sbjct: 127 RILLEFVSANPTGPLHLGHGRWAALGSSLERILQFAGYTVDSEFYINDAGNQMQLLGLSL 186 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAM 241 RY Q L +LP+G Y G YLK + ++L L P + Y+ + Sbjct: 187 KQRYLQVL-GEAVELPDGGYKGSYLKELAEQLVADKGDSLGGEP----VEWFSAYAEGRL 241 Query: 242 MKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTT-- 299 ++ + L+ + D + SE H I + +L +G +Y + Sbjct: 242 LEQQKITLQQFRTEFDRWYSERSLHC--AGAIEAALADLEARGMLYRAARSRQEQSGEIT 299 Query: 300 ------------QKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347 ++ D + L F++ GD++DR + ++DG+ TY AAD+AY KY+R Sbjct: 300 GRSKKVQAPAAFEEEDGGGEALFFKAADFGDEMDRVVKRADGNTTYLAADIAYHWDKYQR 359 Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR------DGMPIKMS 401 G+ +I + G+DH GYV R++AVA A+ + +L+ ++VRL++ ++MS Sbjct: 360 GYGRLINIWGADHHGYVPRMKAVAQALGHPADSLEILIGQMVRLFKTNPETGQKEEMRMS 419 Query: 402 KRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARC 461 KR G+ +++ +++EVG D+ R+ +L + + ++FD + + +NPVFYVQY +ARC Sbjct: 420 KRRGELVSVDDLIEEVGVDAGRWFLLSQSLNTTVNFDLDLAQSEKFDNPVFYVQYNHARC 479 Query: 462 RSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKL 521 SI R+A + + E L + L P A + + P +L Sbjct: 480 CSILRKAPERGMPILERFEFLKPDGGLWLETPQERTLALRLLAAPDEYRFAAVDRTPQRL 539 Query: 522 AFYLYDLASVFHGHWSHGRENPRLRFVQAN-NRKLTMMRLQLVHAVASIINSGLNIIGVE 580 Y YDLAS + H P L + N L RL LV A ++ + L ++G+E Sbjct: 540 TQYAYDLASDVSQFYEHC---PILPPLAENLEPALRYARLGLVVATRQVLATTLTLLGIE 596 Query: 581 SPNEM 585 M Sbjct: 597 PRESM 601 >gi|206602542|gb|EDZ39023.1| Arginyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG'] Length = 595 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 202/597 (33%), Positives = 309/597 (51%), Gaps = 29/597 (4%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 S L++YLKE + + + +E P+ G +ST AM LS L P IAE Sbjct: 10 ISDTLRSYLKERGQGEDLATLLPKGVRLEFPKKDGFGDISTPVAMHLSAQLKTPPRKIAE 69 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 + + + P SV IAG G++N S + +RK L I+ + + + ++ +E Sbjct: 70 SLYSFLSGSPLFQSVEIAGPGYLNFTFSETSVRKALLKILDTHSDLVFPE-DERRRILVE 128 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS--VFWR 184 FVSANPTGP+HVGH R A GD L+ ++ G++VT EYYINDAG Q+ L S + WR Sbjct: 129 FVSANPTGPLHVGHGRGAAYGDALSRILKAVGHDVTTEYYINDAGNQMEMLGRSTCLAWR 188 Query: 185 YQQALYNNDSD--LPEGY--YPGVYLKHVGKEL---------ADKYSSELLNFPEEKWLP 231 + + +G Y G Y++ + +E+ + +S PE +L Sbjct: 189 KLHRMVPESEENAFLKGATPYKGDYIREIAQEMINTPGILSPEESRASLDPEAPETLYLG 248 Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291 +Y+ +M+ IR+DL+ ++ D F SE H D + + + E L Sbjct: 249 AFTEYAQSRIMEGIREDLQLFDVPFDAFFSEKILHEKKNGKNSDTVTLWINR--IREASL 306 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351 L R+T++GDD DR L++SDG TYFAAD+AY K ER FD Sbjct: 307 QAT-DPGVPDVYESEGALWLRTTVLGDDKDRVLVRSDGRLTYFAADIAYHALKIERKFDV 365 Query: 352 MIYVMGSDHSGYVKRLEAVAAAVS---EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 +I V G+DH GY+ R+ A +S + + V L +LV L RDG P+ MS R G+F+ Sbjct: 366 LIDVWGADHHGYIPRMNAAVKTLSRLLDHPVEFRVALIQLVSLVRDGRPVSMSTRGGEFV 425 Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 TLR V+DEVG D+ RF L R + L+FD K KE+S +NPV+YVQYA+AR +S+ RQA Sbjct: 426 TLREVLDEVGVDATRFSYLSRSHESPLEFDLNKAKERSMDNPVYYVQYAHARVKSLLRQA 485 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 L + R++ E+ + +E L+ L + V+ + + E + + YL DL Sbjct: 486 DTRGLTLPAEWSSRDL---EALREPAEKDLVKRLDRFSGVVNDVSRTLEVHPMTEYLTDL 542 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A +H + H R + + +R+LT+ R+ L AV ++ GL ++G+ +P+ M Sbjct: 543 AGRYHHFYFHHRILSQ----EPQDRELTIARIALSIAVGRVLEKGLGLLGISAPDVM 595 >gi|327399125|ref|YP_004339994.1| Arginyl-tRNA synthetase [Hippea maritima DSM 10411] gi|327181754|gb|AEA33935.1| Arginyl-tRNA synthetase [Hippea maritima DSM 10411] Length = 543 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 206/578 (35%), Positives = 311/578 (53%), Gaps = 38/578 (6%) Query: 11 LKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 +K + +I + K +E P++ G STN AMI++ L +P IAE V Sbjct: 1 MKEKIAQIINDFVKKYKENINFTVEYPKEEKFGDYSTNMAMIMASKLKKNPKAIAEEFVE 60 Query: 71 RIKID--PDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128 K + + IAG GF+N Y++ + + + I + Y + I KV +EFV Sbjct: 61 FAKQQKPDLFEKIEIAGPGFVNFYINKNAFAEEIKRISENVNLYLKPKIDSTKKVQVEFV 120 Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188 SANPTGP+HVGH R A +GD++A +++F GYEV +EYYINDAG Q++ L LS F RY+Q Sbjct: 121 SANPTGPLHVGHGRGAAIGDSIARILSFCGYEVEKEYYINDAGLQMHLLGLSTFIRYKQL 180 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDD 248 L + LPE Y G YL V K+L +Y LLN E + + I + + ++K I + Sbjct: 181 L-GIEETLPEDGYKGEYLIEVAKKLIVEYGETLLNKKESEAVEICMQKAAKDILKDIMET 239 Query: 249 LKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQ 308 LK ++ D +E + D + + + L + +YE Sbjct: 240 LKDFRVEFDKVFNEKKLY--DSNEVEQSLSLLKEKNAIYE----------------KDGA 281 Query: 309 LLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRL 367 L F+ST GDD DR L +S+G +TYFA+D+AY + K+ +RGF +I V GSDH GYVKR+ Sbjct: 282 LWFKSTGFGDDKDRVLKRSNGVFTYFASDVAYHRNKFLKRGFSEVIDVWGSDHHGYVKRV 341 Query: 368 EAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMML 427 +A A+ ++ V+L ++V L R+G + MS R +F+ L+ VV EVG D+ RFM + Sbjct: 342 KAAIQAMGIDPNRLKVVLVQIVNLLRNGQKVSMSTRRAEFVELKDVVKEVGVDAARFMFV 401 Query: 428 WRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQ 487 R LDFD K+QS ENPV+YVQYA+AR SI Q + ++D + P Sbjct: 402 SRSVDSHLDFDLELAKKQSSENPVYYVQYAHARINSILEQ---LNSEIDLNADPS----- 453 Query: 488 ESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRF 547 + E++LI + ++ ++E A + EPY + L ++A H ++ R Sbjct: 454 -CLKEKEEIELIKSVIKFKELLEKAFLETEPYFIVKGLLEVAEKLHRFYNKHR------- 505 Query: 548 VQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V +N +L R+ LV V I+ GL++IGVE+ N+M Sbjct: 506 VIIDNEELKKARVLLVWVVKEILKIGLSLIGVEAKNKM 543 >gi|298253127|ref|ZP_06976919.1| arginyl-tRNA synthetase [Gardnerella vaginalis 5-1] gi|297532522|gb|EFH71408.1| arginyl-tRNA synthetase [Gardnerella vaginalis 5-1] Length = 598 Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats. Identities = 179/624 (28%), Positives = 310/624 (49%), Gaps = 76/624 (12%) Query: 7 FSSRLKNYLKEIDCKIKVEK------KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 S ++ K++ K +++ + RP+D AHG +TN AM L++ G+ Sbjct: 6 LSELIEKIAKDLVASGKAGNLTEDLIPAAEKLAVMRPKDRAHGDWATNVAMQLAKKAGMK 65 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AEL R++ + SV +AG GFIN+ L + ++ ++ G +G+N G Sbjct: 66 PHDLAELFAERLQEAEGIASVEVAGPGFINITLDSASAAAVVDEVLKQGAAFGKNTHLSG 125 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +N+EFVSANPTGP+H+G R A VGD++A ++ +G +V REYY ND G QIN A S Sbjct: 126 KTLNLEFVSANPTGPIHIGGTRWAAVGDSMARVLEANGAKVVREYYFNDHGEQINRFAKS 185 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN----------------- 223 + + P Y G Y+ + + + +++ ++ Sbjct: 186 LVAAAH------GEETPADGYKGAYINEIADSVIKEANADGVDVLSLPRIDLGKDEEGLP 239 Query: 224 --FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281 + + + +V M IR ++ + D++ E+ + + + I +L Sbjct: 240 LGEGDSEQREEFRKRAVPMMFAEIRKSMRDFRVSFDVWFHENSLY--EDGEVERAIADLR 297 Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341 +G ++E F ST GDD DR ++KSDG+Y YFAAD+AY+ Sbjct: 298 ERGDIFE----------------KDGATWFESTKHGDDKDRVIIKSDGNYAYFAADIAYY 341 Query: 342 KCKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMP 397 + K R D IY++G+DH GY+ R+ A+ AA +K + + +L+ +LV + +DG P Sbjct: 342 RNKRHREQNPADVAIYMLGADHHGYIGRMMAMCAAFGDKPGENMQILIGQLVNVMKDGKP 401 Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457 ++MSKRAG+ IT+ +VD +G D+ R+ + + +D D + S +NPV+YVQYA Sbjct: 402 VRMSKRAGNVITIDDLVDAIGVDASRYSLARTDYNTSVDIDLDLLASHSNDNPVYYVQYA 461 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 +AR ++ R A D + D +++ E++ +++ LA++P + A + Sbjct: 462 HARSCNVARNAADAG--ITQDGADLSLLNTETDG-----EVLAALAQWPAALAQAGDLRA 514 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENP----------------RLRFVQANNRKLTMMRLQ 561 P+++A YL DLA+ +H ++ R P R + RL+ Sbjct: 515 PHRVAHYLEDLAASYHKWYNLERVVPMELTDPENRLPEAEREAQRIAKCPEPARAAARLK 574 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 L AV ++I +GL+++GV +P +M Sbjct: 575 LNAAVRTVIATGLDLLGVSAPEKM 598 >gi|288819194|ref|YP_003433542.1| arginyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] gi|288788594|dbj|BAI70341.1| arginyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] gi|308752776|gb|ADO46259.1| arginyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6] Length = 551 Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats. Identities = 213/584 (36%), Positives = 331/584 (56%), Gaps = 42/584 (7%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 S +K +KEI I +E +E+P++ + G LSTN A ++++ L ++P +A+ Sbjct: 5 LESSIKETIKEI-YGINIEG-----FTVEKPKEESLGDLSTNVAFLVAKELKINPKDVAQ 58 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 + ++ + A GFIN S ++ R+ ++ +Y IGKG V IE Sbjct: 59 ELAKKLSNKKMLAK---ASGGFINFTFSENFWREEFEKLLKEREKYFVEDIGKGESVQIE 115 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGP+H+GH R AVVGD LA+L+ GY V REYYINDAG Q+ L LSVF RY Sbjct: 116 FVSANPTGPLHLGHGRGAVVGDVLANLLETYGYRVVREYYINDAGYQVYLLGLSVFCRYM 175 Query: 187 QALYNNDSDLPEGY----YPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMM 242 + D++L + Y Y G Y+K + +++ Y LL +K + ++DY+V+ ++ Sbjct: 176 ELFGQEDAELKQVYEREGYKGSYIKKLAEDVKAFYGDALLKEERQKAIERLRDYAVKRLL 235 Query: 243 KIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 + IRDDL+ LNI+ D++ SE + + + +I+ L +GY YE Sbjct: 236 EEIRDDLELLNIKFDVWYSERSLY--EEGKVEQVINLLRERGYTYE-------------- 279 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 + L FRST GDD DR L++SDG+YTYFA+D+AY KY+RGF +I V G+DH G Sbjct: 280 --KDQALWFRSTDFGDDKDRVLIRSDGTYTYFASDVAYHWEKYKRGFARVINVWGADHHG 337 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 Y+ RL+ +A+ + ++V ++VRL+ G ++MSKR G+F+TLR +V+EVGSD+V Sbjct: 338 YLPRLKGALSALGVPQNWLHVQFVQMVRLFSAGQEVRMSKRTGEFVTLRELVEEVGSDAV 397 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIF-PDLDFDLFP 481 RF L +++ LDFD +K++S ENPVFYVQY +AR R +FR+ F D D + Sbjct: 398 RFTFLTKRSDTPLDFDIDLLKKKSSENPVFYVQYMHARIRGVFREVLSRFGIDADKEELN 457 Query: 482 RNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + V + + EL+L+ I+ A + P+ + + L DLA FH +++H R Sbjct: 458 KFV---YNLREEQELKLVKKAVSLKDSIKEAALRWLPHIITYELIDLAKDFHNYYNHYR- 513 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 V +R++ + RL L + + + L ++ V +P M Sbjct: 514 ------VIVEDREVMLSRLALFKGIETSVKFALKLMKVSAPERM 551 >gi|229815551|ref|ZP_04445878.1| hypothetical protein COLINT_02601 [Collinsella intestinalis DSM 13280] gi|229808781|gb|EEP44556.1| hypothetical protein COLINT_02601 [Collinsella intestinalis DSM 13280] Length = 622 Score = 505 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 188/633 (29%), Positives = 304/633 (48%), Gaps = 74/633 (11%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 ++ L + L+ +ERP D +HG ++ AM ++ P IA+ Sbjct: 10 IEELVRTALAAAQEAGDLPAFELEDCGMERPADTSHGEWTSTCAMKSAKLAHCAPKKIAD 69 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 IVA + ++ V +AG GFIN YL+ + IL G+++ ++ IG+G K +E Sbjct: 70 AIVAHMPESAEIAKVEVAGPGFINFYLNAAANNAILDVARKEGMDFAKSNIGQGLKTQVE 129 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANP GPMHVGH R A +GD+L +M+ +GY++ RE+YIND G+Q++ S+ +RY Sbjct: 130 FVSANPVGPMHVGHGRWAALGDSLCRVMSHAGYDIQREFYINDHGSQMDVFGNSISYRYM 189 Query: 187 QALYNNDSD---------------------------------------LPEGYYPGVYLK 207 Q + + + L Y G Y+ Sbjct: 190 QLIEIMEKEGLDIDGARDFLAQDRDNFVQDEADEHLDSHPYMDAFTEGLGGNAYGGTYII 249 Query: 208 HVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHR 267 K + + +E+ + ++ M++ +R + D + SE + Sbjct: 250 DEAAAFYKKDGDKWAHVTDEERMLYFREEGYAKMVENMRQLCHDVRCDFDKWFSERTVYI 309 Query: 268 GD-------PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDV 320 D S + L GY+Y L FRST +GDD Sbjct: 310 KDTEGEHAGTSAVDRAFAKLDEMGYLYN----------------KDGALWFRSTDLGDDK 353 Query: 321 DRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ 380 DR L+K++G YTYFA+D+AY K++R D++I + G DH GY+ R+ V A+ Q Sbjct: 354 DRVLVKANGEYTYFASDVAYHWDKFQR-VDHVIDIWGCDHHGYINRVRCVCDALGY-PGQ 411 Query: 381 INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFC 440 VLL + V L R+G PI+MSKR G +T + +VDEVG+D+ R+ ++ R +++ +DFD Sbjct: 412 FEVLLGQFVNLLRNGKPIRMSKRKGTMVTFQELVDEVGADATRYTLISRSSNQAIDFDIE 471 Query: 441 KVKEQSKENPVFYVQYAYARCRSIFRQAK----DIFPDLDFDLFPRNVIPQ----ESEFD 492 VKE+S+ NPV+YVQYA+AR SI R+A + ++ D I + D Sbjct: 472 AVKEKSQNNPVYYVQYAHARICSILRKAAGVTPEEAAEMGMDAVAAKAIGENVDYALLTD 531 Query: 493 TSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANN 552 +EL L ++E +I + + P++L + +LA+ FH + + P + + Sbjct: 532 PTELALSRKISELEDLIASCARDRAPFRLTHFAEELAAGFHSFYQACQVLPSEG--RPVD 589 Query: 553 RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +L+ RL AV S++ L++IGV +P M Sbjct: 590 AELSRARLAACDAVRSVLELVLSLIGVSAPTTM 622 >gi|294790545|ref|ZP_06755703.1| arginine--tRNA ligase [Scardovia inopinata F0304] gi|294458442|gb|EFG26795.1| arginine--tRNA ligase [Scardovia inopinata F0304] Length = 600 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 186/615 (30%), Positives = 303/615 (49%), Gaps = 65/615 (10%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKILD---RIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 A+ S++ + L + ++ +IV+ RP+D HG +TN AM L + G+ P Sbjct: 17 AELISQIAHGLSAQGQAGTLTDNLIPETSKIVVMRPKDRTHGDWATNIAMQLGKKAGMAP 76 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 +A L R++ + SV +AG GFIN+ L + ++ I+ G ++G+N G Sbjct: 77 RDLAALFADRLRKAEGIASVEVAGPGFINIVLDSASAAAVVDQILSQGRKFGQNDHLTGK 136 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 +N+EFVSANPTGP+H+G R A +GD+LA ++ +G V REYY ND G QIN A S+ Sbjct: 137 TLNLEFVSANPTGPIHIGGTRWAAIGDSLARVLEANGATVVREYYFNDHGEQINRFARSL 196 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL---ADKYSSELLNFP----------EEK 228 P Y G Y+ + + + A ++LN P + Sbjct: 197 VAAAH------GEPAPADGYQGEYITEIAEAVTRQAQADGVDILNLPRVREDDGSEGDSP 250 Query: 229 WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYE 288 ++ VQ M I+ + + D++ E+ + + + L QG +Y+ Sbjct: 251 QREEFRNRGVQMMFDQIKKTMSDFRVNFDVYFHENSVY--EDGEVDRAFRRLKDQGDIYQ 308 Query: 289 GILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER- 347 F+ST GDD DR ++KS+G Y AD+AY+ K R Sbjct: 309 ----------------KDGATWFQSTKYGDDKDRVIIKSNGETAYIMADIAYYLNKRHRV 352 Query: 348 --GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRA 404 D IY++G+DH GYV+RL+AV AA +K + VL+ +LV + +DG P++MSKRA Sbjct: 353 KNPADIAIYMLGADHHGYVRRLQAVCAAFGDKPGYNMQVLIGQLVNVVKDGKPVRMSKRA 412 Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 G+ +T+ +VD VG D+ R+ + ++ +D D + + S ENPV+YVQYA+AR +++ Sbjct: 413 GNVVTMEDLVDAVGVDAARYSLERTTYNQNIDIDLDLMTKHSNENPVYYVQYAHARSKNV 472 Query: 465 FRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFY 524 R A+ + P +SE L+ LA YP V++ A EP+++A Y Sbjct: 473 DRNAQAAGITVAGADLSLLDSPADSE-------LLSQLALYPSVVQTAADLNEPHRIAHY 525 Query: 525 LYDLASVFHGHWSHGRENP--------------RLRFVQANNRKLTMMRLQLVHAVASII 570 L DLA +H ++ R P + + + + + RL+L A + Sbjct: 526 LEDLAGSYHQWYAAERVVPMKLTEPELEGSDARKTQLAKDPDPARSSARLKLNDAACQVF 585 Query: 571 NSGLNIIGVESPNEM 585 +GL ++GV +P++M Sbjct: 586 ENGLALLGVTAPDKM 600 >gi|315655913|ref|ZP_07908811.1| arginine--tRNA ligase [Mobiluncus curtisii ATCC 51333] gi|315489977|gb|EFU79604.1| arginine--tRNA ligase [Mobiluncus curtisii ATCC 51333] Length = 559 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 176/588 (29%), Positives = 299/588 (50%), Gaps = 41/588 (6%) Query: 6 DFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + R+ L + + + + +++++ +ERP++ HG +TN A+ L + +G +P Sbjct: 5 ELTQRIIAQLSTAEAENNIVLADGVLVEKMRVERPKNRDHGDWATNIALQLGKSVGKNPR 64 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +AE+ + I V S +AG GFIN+ L +++ I+ SG +YG KG Sbjct: 65 ELAEIFASAIAQIDGVSSAEVAGPGFINIRLEAGAAGALVADILASGNDYGHGEGLKGVH 124 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 +N+E+VSANPTGP+H+G R A VGD+LA L FSG +VTREYY ND G+QI+ A+S+ Sbjct: 125 INLEYVSANPTGPLHIGGARWAAVGDSLARLYKFSGAKVTREYYFNDHGSQIDRFAISLL 184 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY----SSELLNFPEEKWLPIVKDYSV 238 + + PE Y G Y+ + ++ + + +E + + V Sbjct: 185 AAARNQ------ETPEDGYGGQYIADIAAKVQAEAKTAGDPDPATLDDEAAQEYFRSHGV 238 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + M I++ L+ + D+F E+ + + + +D L +G V E Sbjct: 239 ELMFDEIKESLRGFRTEFDVFFHENSLY--ETGAVTKALDYLRERGEVIE---------- 286 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 +T GDD DR ++KSDG+ +YFA+D+AY++ K RG D ++++G+ Sbjct: 287 ------KDGATWLLTTKHGDDKDRVVIKSDGNASYFASDVAYYQDKRRRGADRAVFLLGA 340 Query: 359 DHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 DH GYV R+ A+ AA +K + +++ +LV L++DG P++MSKRAGD +TL V+ V Sbjct: 341 DHHGYVGRMMAMCAAYGDKPGVNMQIIIGQLVNLFKDGEPVRMSKRAGDIVTLEDFVEAV 400 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G D+ R+ ++ L D + + ENPV+YVQYA+AR ++ + A Sbjct: 401 GVDAARYALVRSSMDTQLAIDLDVLASHTNENPVYYVQYAHARTSNVAKNAAAHGVSCAD 460 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 P + D ++ LI LA++P V+ A + + YL +L+ +H + Sbjct: 461 GFAPAEL------RDPADAALIGVLAQFPSVVATAAAENATHLVPRYLENLSGAYHTWYG 514 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R P L L +AV ++ +GL+++GV +P M Sbjct: 515 KRRVTPAG---DEPVTAEHAALLALNNAVGQVLRNGLDLLGVTAPERM 559 >gi|77163574|ref|YP_342099.1| arginyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707] gi|254435764|ref|ZP_05049271.1| arginyl-tRNA synthetase [Nitrosococcus oceani AFC27] gi|109895010|sp|Q3JF27|SYR_NITOC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|76881888|gb|ABA56569.1| arginyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707] gi|207088875|gb|EDZ66147.1| arginyl-tRNA synthetase [Nitrosococcus oceani AFC27] Length = 585 Score = 505 bits (1300), Expect = e-140, Method: Composition-based stats. Identities = 189/618 (30%), Positives = 303/618 (49%), Gaps = 80/618 (12%) Query: 9 SRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELI 68 + + + L + + + D+I ++R RD +HG ++N +M+L++ P +A+LI Sbjct: 7 NLIADALSSLQQEGILSSWNKDKIQVQRTRDKSHGDFASNISMVLAKEARQKPQKLADLI 66 Query: 69 VARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFV 128 VAR+ P V V IAG GFIN L+ + ++S ++ +GR G G V++EFV Sbjct: 67 VARLPEHPWVKKVDIAGPGFINFTLALPAFQAVVSQVLEQKESFGRCRTGHGKTVHLEFV 126 Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188 SANPTGP+HVGH R A GD LA L+ GY+V REYY+NDAG Q++ LA+SV+ RY + Sbjct: 127 SANPTGPLHVGHGRGAAYGDALARLLTAVGYQVHREYYVNDAGRQMDILAVSVWLRYLE- 185 Query: 189 LYNNDSDLPEGYYPGVYLKHVGKELADKYSS---------------ELLNFPEEKWLP-- 231 L P Y G Y++++ + L + EK+L Sbjct: 186 LCGETLPFPSNGYQGEYVRNIARSLKAGEEDLPHHSATEILAGLPADAPTGDREKYLDAL 245 Query: 232 --------------IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDII 277 V + ++ ++ IR+DL + +D + SE H + I I Sbjct: 246 IQKIKNLLGKNSYQKVFEQALNTILAGIREDLAKFGVTYDAWFSER--HLTEMGAIEIAI 303 Query: 278 DNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAAD 337 + L G++Y+ F +T GD+ DR +++ +G TYFA+D Sbjct: 304 ERLKAAGHLYQ----------------KAGAWWFYATNFGDEKDRVVIRENGQPTYFASD 347 Query: 338 LAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMP 397 +AY K E+G+ +I + G+DH GY+ R++A A+ Q+++ L + LYR Sbjct: 348 IAYHLSKLEQGYHKIIDIWGADHHGYIPRIKASLQALGADLQQLDIQLVQFAILYRGKEK 407 Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457 I+MS R+G+F+TLR + EVG D+ RF + R + +DFD K QS ENPV+YVQYA Sbjct: 408 IQMSTRSGEFVTLRELCQEVGKDAARFFYVMRGAEQHMDFDLELAKSQSNENPVYYVQYA 467 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 +AR S+FRQ K + + ++ + E+ L+ L+ Y V+E+A I Sbjct: 468 HARICSVFRQLKTREFVWNSEQGREHLG---KLNEAHEVTLLDRLSCYSEVVESAAIQSA 524 Query: 518 PY----------KLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVA 567 P+ + FH +++ + +L RL L+ A Sbjct: 525 PHLLAYYLLDLAR----------DFHTYYNAHTF-------LVDIPELRDARLALIAATR 567 Query: 568 SIINSGLNIIGVESPNEM 585 +I +GL ++GV +P M Sbjct: 568 QVIKNGLTLLGVSAPESM 585 >gi|294506995|ref|YP_003571053.1| Arginyl-tRNA synthetase, class Ic [Salinibacter ruber M8] gi|294343323|emb|CBH24101.1| Arginyl-tRNA synthetase, class Ic [Salinibacter ruber M8] Length = 562 Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats. Identities = 187/598 (31%), Positives = 304/598 (50%), Gaps = 59/598 (9%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 ++++ L + V I +E P HG L+TN A+ L+ LG +P +IA+ Sbjct: 5 LRTQIRRVLDAL---GDVPDDF--EIELEAPDRPEHGDLATNTALRLASVLGDNPRSIAD 59 Query: 67 LIVARIK---IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 + R++ + +V +AG GF+N + YL L+ ++ G +G+ G G + Sbjct: 60 TLAERLRGRVDPARIKNVEVAGPGFVNFRFAQDYLFDGLADLLAQGDTFGQTDAGAGQRA 119 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +E+VSANPTGP++VGH R AV+GDT+A+L+A++GY+VTREYY NDAG Q+ LA SV Sbjct: 120 LVEYVSANPTGPLNVGHGRNAVLGDTIANLLAWTGYDVTREYYYNDAGRQMRVLAQSVRA 179 Query: 184 RYQQALYNN----------------DSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEE 227 RY +AL N PE Y G Y+ + + L D++ L + Sbjct: 180 RY-EALAGNVPTTTLTLDDDTTVEVPETFPEDGYLGQYIVEIAQNLYDEHGDALCATDD- 237 Query: 228 KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVY 287 L + + A+ I L ALNI D + +E H D + ++D LA GY Y Sbjct: 238 --LAPFRAAAETAIFGDIEATLHALNIDMDGYANEQALH--DEGRVDAVLDGLADAGYTY 293 Query: 288 EGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYER 347 E + L F++T G + D L+K G TY D+AY K+ER Sbjct: 294 E----------------EDGALWFKTTEFGTEDDTVLVKQTGEPTYRTPDIAYHAAKFER 337 Query: 348 GFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDF 407 GFD M+ V G+DH + + + +++V+L + V L R P+KMS R ++ Sbjct: 338 GFDLMVDVFGADHHAAYPDVLSALDVLGYDTDRVDVILYQFVTLVRGDEPVKMSTRRANY 397 Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467 +TL ++++VG+D RF L R L+FD +E+S++NPVFY+QYA+AR S+ + Sbjct: 398 VTLDDLIEQVGADVTRFFFLMRSPDTHLNFDLELAEEESEKNPVFYLQYAHARICSVLDK 457 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 A+++ D D E+ LI L +P+ ++NA A+ P+ + YL D Sbjct: 458 AEEVGFSHDED------ADLALLTHEDEIALIKELLRFPQELQNAAGARAPHFVPNYLRD 511 Query: 528 LASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +A+ F + + R + ++L R++L A +++ +GL ++G+ +P +M Sbjct: 512 VATAFSQFYDNCR-------IIGEEQELASARMRLALAAKTVLKNGLTVLGISAPRQM 562 >gi|298345508|ref|YP_003718195.1| arginine--tRNA ligase [Mobiluncus curtisii ATCC 43063] gi|304391064|ref|ZP_07373016.1| arginine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315656160|ref|ZP_07909051.1| arginine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|298235569|gb|ADI66701.1| arginine--tRNA ligase [Mobiluncus curtisii ATCC 43063] gi|304325947|gb|EFL93193.1| arginine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315493162|gb|EFU82762.1| arginine--tRNA ligase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 559 Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats. Identities = 177/588 (30%), Positives = 298/588 (50%), Gaps = 41/588 (6%) Query: 6 DFSSRLKNYLKEIDCKIKV---EKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + R+ L + + + + +++ +ERP++ HG +TN A+ L + +G +P Sbjct: 5 ELTQRIIAQLSTAAAENNIVLADGVLAEKMRVERPKNRDHGDWATNIALQLGKSVGKNPR 64 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +AE+ + I V S +AG GFIN+ L +++ I+ SG +YG KG Sbjct: 65 ELAEIFASAIAQIDGVSSAEVAGPGFINIRLEAGAAGALVADILASGNDYGHGEGLKGVH 124 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 +N+E+VSANPTGP+H+G R A VGD+LA L FSG +VTREYY ND G+QI+ A+S+ Sbjct: 125 INLEYVSANPTGPLHIGGARWAAVGDSLARLYKFSGAKVTREYYFNDHGSQIDRFAISLL 184 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSS----ELLNFPEEKWLPIVKDYSV 238 + + PE Y G Y+ + ++ + + + +E + + V Sbjct: 185 AAAR------GQETPEDGYGGQYIADIAAKVQAEAKAAGDPDPATLDDEAAQEYFRSHGV 238 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + M I++ L+ + D+F E+ + + + +D L +G V E Sbjct: 239 ELMFDEIKESLRGFRTEFDVFFHENSLY--ETGAVTKALDYLRERGEVIE---------- 286 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 +T GDD DR ++KSDG+ +YFA+D+AY++ K RG D ++++G+ Sbjct: 287 ------KDGATWLLTTKHGDDKDRVVIKSDGNASYFASDVAYYQDKRRRGADRAVFLLGA 340 Query: 359 DHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 DH GYV R+ A+ AA +K + +++ +LV L++DG P++MSKRAGD +TL V+ V Sbjct: 341 DHHGYVGRMMAMCAAYGDKPGVNMQIIIGQLVNLFKDGEPVRMSKRAGDIVTLEDFVEAV 400 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G D+ R+ ++ L D + + ENPV+YVQYA+AR ++ + A Sbjct: 401 GVDAARYALVRSSMDTQLAIDLDVLASHTNENPVYYVQYAHARTSNVAKNAAAHGVSCAD 460 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 P E D ++ LI LA++P V+ A + + YL +L+ +H + Sbjct: 461 GFAP------EELRDPADAALIGVLAQFPSVVATAAAENATHLVPRYLENLSGAYHTWYG 514 Query: 538 HGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R P L L +AV ++ +GL+++GV +P M Sbjct: 515 KRRVTPAG---DEPVTAEHAALLALNNAVGQVLRNGLDLLGVTAPERM 559 >gi|89899583|ref|YP_522054.1| arginyl-tRNA synthetase [Rhodoferax ferrireducens T118] gi|109895026|sp|Q220N0|SYR_RHOFD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|89344320|gb|ABD68523.1| arginyl-tRNA synthetase [Rhodoferax ferrireducens T118] Length = 565 Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats. Identities = 187/594 (31%), Positives = 296/594 (49%), Gaps = 47/594 (7%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 L L + K+ + V E P+ AHG L+T AAM L++PL L+P +AE Sbjct: 4 VKIELLEALHQALEKLSPGAG--SKAVFESPKVAAHGDLATTAAMQLAKPLKLNPRQLAE 61 Query: 67 LIVARI----KIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 + A + + V+++ IAG GFIN+ L P ++ + ++ G ++G + G G + Sbjct: 62 NLRAELLVRAPFERWVEAIDIAGPGFINIKLKPEAKQQTVREVLSQGQQFG-SQPGTGKR 120 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 + +EFVSANPTGP+HVGH R A +GD + +L G+ V RE+Y NDAG QI TLA S Sbjct: 121 MLVEFVSANPTGPLHVGHGRQAALGDAICNLYQTQGWAVYREFYYNDAGVQIGTLASSTQ 180 Query: 183 WRYQQALYNNDSDLPEG----YYPGVYLKHVGKELADK-----YSSELLNFPEEKWLPIV 233 R + D + P G Y G Y+ + + K + + L + Sbjct: 181 LRAR-GFKPGDPEWPSGENAAAYNGDYIADIAADYLAKKTVHSDDRAFTASGDVEALDDI 239 Query: 234 KDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPP 293 + ++V + DLKA + D + E + + D++ L G YE Sbjct: 240 RLFAVAYLRHEQDLDLKAFAVHFDNYYLESSLY--LSGKVDDVVKRLHDAGKTYEH---- 293 Query: 294 PKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMI 353 L +ST GDD DR + K DGSYTYF D+AY K+ERGF+ ++ Sbjct: 294 ------------DGALWLKSTEYGDDKDRVMRKGDGSYTYFVPDVAYHISKWERGFEKVV 341 Query: 354 YVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 + G+DH G + R+ A A V K + +L +VR+ R G +K+SKRAG ++TLR Sbjct: 342 NIQGTDHHGTIARVRAGLQAANVGIPKGYPDYVLHTMVRVVRGGEEVKISKRAGSYVTLR 401 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 +++ D+VRF +L RK FD ++ +NPV+YVQYA+AR S+ ++ Sbjct: 402 DLIEWTSKDAVRFFLLSRKPDTEYTFDVDLAVAKNNDNPVYYVQYAHARICSVLAAWREK 461 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 L ++ P +S + L LA+YP ++ A P+ + FYL +LA+ Sbjct: 462 EGGDVASLGQADLSPLQSPQALALLL---LLAKYPEMLTAAAAGFAPHDVTFYLRELAAC 518 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 +H ++ R + ++ + RL LV A A ++++GL ++GV +P +M Sbjct: 519 YHSYYDAER-------ILVDDDLIKRARLALVAATAQVLHNGLAVLGVSAPQKM 565 >gi|297243030|ref|ZP_06926968.1| arginyl-tRNA synthetase [Gardnerella vaginalis AMD] gi|296889241|gb|EFH27975.1| arginyl-tRNA synthetase [Gardnerella vaginalis AMD] Length = 598 Score = 504 bits (1299), Expect = e-140, Method: Composition-based stats. Identities = 178/624 (28%), Positives = 309/624 (49%), Gaps = 76/624 (12%) Query: 7 FSSRLKNYLKEIDCKIKVEK------KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 S ++ K++ K +++ + RP+D AHG +TN AM L++ G+ Sbjct: 6 LSELIEKIAKDLVASGKAGSLTEDLIPAAEKLAVMRPKDRAHGDWATNVAMQLAKKAGMK 65 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AEL ++ + SV +AG GFIN+ L + ++ ++ G ++G+N G Sbjct: 66 PSDLAELFAESLQEAEGIASVEVAGPGFINITLDSASAAAVVDEVLKQGADFGKNTHLSG 125 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +N+EFVSANPTGP+H+G R A VGD++A ++ +G +V REYY ND G QIN A S Sbjct: 126 KTLNLEFVSANPTGPIHIGGTRWAAVGDSMARVLEANGAKVVREYYFNDHGEQINRFAKS 185 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN----------------- 223 + + P Y G Y+ + + + ++ ++ Sbjct: 186 LVAAAH------GEETPADGYKGAYINEIADAVIKEAQADGVDVLSLPRIDLGKDEEGLP 239 Query: 224 --FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281 + + + +V M IR ++ + D++ E+ + + + I +L Sbjct: 240 LGEGDSEQREEFRKRAVPMMFAEIRKSMRDFRVDFDVWFHENSLY--EDGEVERAIADLR 297 Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341 +G ++E F ST GDD DR ++KSDG+Y YFAAD+AY+ Sbjct: 298 SRGDIFE----------------KDGATWFESTKHGDDKDRVIIKSDGNYAYFAADIAYY 341 Query: 342 KCKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMP 397 + K R D IY++G+DH GY+ R+ A+ AA +K + + +L+ +LV + +DG P Sbjct: 342 RNKRHREQNPADVAIYMLGADHHGYIGRMMAMCAAFGDKPGENMQILIGQLVNVMKDGKP 401 Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457 ++MSKRAG+ IT+ +VD +G D+ R+ + + +D D + S +NPV+YVQYA Sbjct: 402 VRMSKRAGNVITIDDLVDAIGVDASRYSLARTDYNTSVDIDLDLLASHSNDNPVYYVQYA 461 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 +AR ++ R A D + D +++ E++ +++ LA++P + A + Sbjct: 462 HARSCNVARNAADAG--ITQDGADLSLLNTEADG-----EVLAALAQWPAALAQAGDLRA 514 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENP----------------RLRFVQANNRKLTMMRLQ 561 P+++A YL DLA+ +H ++ R P R + RL+ Sbjct: 515 PHRVAHYLEDLAASYHKWYNLERVVPMELTDPENRLPEAEREAQRIAKCPEPARAAARLK 574 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 L AV ++I +GL+++GV +P +M Sbjct: 575 LNAAVRTVIATGLDLLGVSAPEKM 598 >gi|163785199|ref|ZP_02179881.1| arginyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1] gi|159879532|gb|EDP73354.1| arginyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1] Length = 517 Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats. Identities = 201/544 (36%), Positives = 318/544 (58%), Gaps = 29/544 (5%) Query: 30 DRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFI 89 + IE P++ G S NAA +L++ L PL IA I ++ + + V +AG GFI Sbjct: 1 KNLKIETPKEEKFGDFSINAAFLLTKYLKKKPLEIANQIKEILEKEDIFEKVEVAGAGFI 60 Query: 90 NLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDT 149 NL+LS + + L VV G YG + K+N+EFVSANPTGP+H+GH R AVVG+ Sbjct: 61 NLFLSTKFFQPFLHKAVVHGDRYGEKINKDKGKINVEFVSANPTGPLHLGHGRGAVVGNA 120 Query: 150 LASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHV 209 L++++++SGYEV +E+YINDAG QI L S++ RY+Q + D PE Y G Y+K + Sbjct: 121 LSNILSYSGYEVVKEFYINDAGNQIRKLGESIYARYRQ-IEQPDFPFPEDGYHGNYIKEI 179 Query: 210 GKELADKYSSELLNF-PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 K++ ++L F E + + + +Y ++ I++DLK +N++ DI+ SE + ++ Sbjct: 180 AKDIYYHEREKVLTFLDESQAVEWMAEYGKNILLDRIKEDLKLINVEFDIWFSEKELYK- 238 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 ++++I+ L +G VYE L ++T+ GDD DR L KSD Sbjct: 239 -TGKVQEVINYLQEKGLVYE----------------KDGALWLKTTLYGDDKDRVLKKSD 281 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 G+YTYFA D+AY K++R + I + G+DH GY RL+A A+ + + VL +L Sbjct: 282 GTYTYFAGDIAYHYDKFKRSYKQAINIWGADHHGYFPRLKAAVMALGASENWLQVLFIQL 341 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 V+L+++G +KMSKRAG+FITLR +V EVG+D+V + L + ++ L+FD ++S E Sbjct: 342 VKLFKNGKEVKMSKRAGEFITLRDLVIEVGADAVIYFFLSKDSNTHLNFDIDLATKKSSE 401 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 NPVFYVQYA+AR S+FR+AK+ L + + E + +E L+ ++ P Sbjct: 402 NPVFYVQYAHARITSVFREAKE---KLGIEANLIEDVNIELLKEKAEKDLMKKISTIPED 458 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 I N ++P+K+ YDLAS FH ++++ +F+ N+ +LT RL L+ AV + Sbjct: 459 IYNIAEQKQPHKITNLAYDLASKFHYYYNN------YKFLNENDEELTKARLYLLRAVRN 512 Query: 569 IINS 572 + + Sbjct: 513 TLRT 516 >gi|269976850|ref|ZP_06183824.1| arginyl-tRNA synthetase [Mobiluncus mulieris 28-1] gi|269934681|gb|EEZ91241.1| arginyl-tRNA synthetase [Mobiluncus mulieris 28-1] Length = 559 Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats. Identities = 182/590 (30%), Positives = 290/590 (49%), Gaps = 45/590 (7%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILD---RIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + R+ L + + ++ +D ++ +ERP+ HG +TN AM L++ G+ P Sbjct: 5 ELTKRIIAALTVVAKENSLDLNEVDLGAKVKVERPKSREHGDWATNIAMQLAKTAGVKPR 64 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +AE+ V I V+S +AG GFIN+ L +++ I+ +G +G+N +G Sbjct: 65 DLAEMFVKAISGIEGVESAEVAGPGFINIRLEAGAAGALVADILAAGDNFGQNQSFQGQH 124 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 +N+E+VSANPTGP+H+G R A VGD+LA LM SG +VTREYY ND G QI+ A S+ Sbjct: 125 INLEYVSANPTGPIHLGGARWAAVGDSLARLMKSSGAKVTREYYFNDHGTQIDRFAASLL 184 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY----SSELLNFPEEKWLPIVKDYSV 238 + PE Y G Y+ + ++ + + P+ + + V Sbjct: 185 AAARGL------PAPEDGYGGQYIADIAAQVQTQAQQAGDPDPATLPDAAAQEYFRAHGV 238 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 M I+ L + D+F E+ + + + I+ L G + Sbjct: 239 TLMFSEIKAALAKFRTEFDVFFHENSLY--ETGKVEAAIEFLDGLGEIAH---------- 286 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 +T GDD DR L+KSDG+ YFAAD+AY++ K ERG D IY++G+ Sbjct: 287 ------KDGATWLLTTKHGDDKDRVLIKSDGNAAYFAADIAYYRDKRERGADCAIYLLGA 340 Query: 359 DHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 DH GY+ R+ A+ AA + + +L+ +LV LYR G +KMSKRAG+ +TL V+ V Sbjct: 341 DHHGYIGRMMAMCAAFGDTPGVNLQILIGQLVNLYRSGQLVKMSKRAGNIVTLDDFVEAV 400 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G D+ R+ ++ LD D + + ENPV+YVQYA+AR ++ + A Sbjct: 401 GVDAARYSLVRSSMDTQLDIDLDVLASHTNENPVYYVQYAHARTCNVAKNAAAHGVSRGA 460 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 P + +LI LA++P + A + P+ +A YL +LA +H + Sbjct: 461 GFDPGQLCAAADG------ELIGVLAQFPTTVAQAATERAPHLVARYLENLAGAYHAWYG 514 Query: 538 HGRENPRLRFVQANNR--KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R P ++ L L AV ++ +GLN++GV +P M Sbjct: 515 KRRVTPA-----GDDPVTAEHAALLALNDAVTVVLRNGLNLLGVSAPERM 559 >gi|308235657|ref|ZP_07666394.1| arginyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018] gi|311115202|ref|YP_003986423.1| arginine--tRNA ligase [Gardnerella vaginalis ATCC 14019] gi|310946696|gb|ADP39400.1| arginine--tRNA ligase [Gardnerella vaginalis ATCC 14019] Length = 598 Score = 503 bits (1296), Expect = e-140, Method: Composition-based stats. Identities = 177/624 (28%), Positives = 309/624 (49%), Gaps = 76/624 (12%) Query: 7 FSSRLKNYLKEIDCKIKVEK------KILDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 S ++ K++ K +++ + RP+D AHG +TN AM L++ G+ Sbjct: 6 LSELIEKIAKDLVASGKAGNLTEDLIPAAEKLAVMRPKDRAHGDWATNVAMQLAKKAGMK 65 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +AEL R++ + V +AG GFIN+ L + ++ ++ G ++G+N G Sbjct: 66 PHDLAELFAERLQEAQGIARVEVAGPGFINITLDSASAAAVVDEVLKQGADFGKNEHLGG 125 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 +N+EFVSANPTGP+H+G R A VGD++A ++ +G +V REYY ND G QIN A S Sbjct: 126 KTLNLEFVSANPTGPIHIGGTRWAAVGDSMARVLEANGAKVVREYYFNDHGEQINRFAKS 185 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLN----------------- 223 + + P Y G Y+ + + + ++ ++ Sbjct: 186 LVAAAH------GEETPADGYKGAYINEIADAVIKEAQADGVDVLSLPRIDLGKDEEGLP 239 Query: 224 --FPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLA 281 + + + +V M IR ++ + D++ E+ + + + I +L Sbjct: 240 LGEGDSEQREEFRKRAVPMMFAEIRKSMRDFRVGFDVWFHENSLY--EDGEVERAIADLR 297 Query: 282 RQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYF 341 +G ++E F ST GDD DR ++KSDG+Y YFAAD+AY+ Sbjct: 298 ERGDIFE----------------KDGATWFESTKHGDDKDRVIIKSDGNYAYFAADIAYY 341 Query: 342 KCKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMP 397 + K R D IY++G+DH GY+ R+ A+ AA ++ + + +L+ ++V + +DG P Sbjct: 342 RNKRHREQNPADVAIYMLGADHHGYIGRMMAMCAAFGDEPGENMQILIGQMVNVMKDGKP 401 Query: 398 IKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYA 457 ++MSKRAG+ IT+ +VD +G D+ R+ + + +D D + S +NPV+YVQYA Sbjct: 402 VRMSKRAGNVITIDDLVDAIGVDASRYSLARTDYNTSVDIDLDLLASHSNDNPVYYVQYA 461 Query: 458 YARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQE 517 +AR ++ R A D D +++ E++ +++ LA++P + A + Sbjct: 462 HARSCNVARNAADAGISADG--ADLSLLNTEADG-----EVLAALAQWPAALAQAGDLRA 514 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENP----------------RLRFVQANNRKLTMMRLQ 561 P+++A YL DLA+ +H ++ R P R + RL+ Sbjct: 515 PHRVAHYLEDLAASYHKWYNLERVVPMELSDPENRLPEAEREAQRIAKCPEPARAAARLK 574 Query: 562 LVHAVASIINSGLNIIGVESPNEM 585 L AV ++I SGL+++GV +P++M Sbjct: 575 LNEAVRTVIASGLDLLGVSAPDKM 598 >gi|193213680|ref|YP_001999633.1| arginyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327] gi|229558753|sp|B3QLU7|SYR_CHLP8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|193087157|gb|ACF12433.1| arginyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327] Length = 551 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 174/575 (30%), Positives = 286/575 (49%), Gaps = 36/575 (6%) Query: 15 LKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI 74 +++ K +E I I++P D G STN A +L++ +P +A ++ Sbjct: 9 IQDALHKAGIETD--KEIQIDKPNDKKFGDFSTNIAFLLAKEARKNPRELATQLIGLFAF 66 Query: 75 -DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPT 133 + V +AG GFIN +L+P++ + ++ G ++G GKG K +E+VSANPT Sbjct: 67 PEGTVTKTEVAGPGFINFHLAPAFFMRSAQEVLTQGEKFGCTESGKGQKAIVEYVSANPT 126 Query: 134 GPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND 193 GP+ +G R V+GD +A+L+ GYEVTREYY NDAG Q+ LA SV +RY + Sbjct: 127 GPLTIGRGRGGVLGDCIANLLETQGYEVTREYYFNDAGRQMQILAESVRYRYLEKC-GQT 185 Query: 194 SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN 253 + PE +Y G Y+ + L ++S EL + E L I K+ + + IR L+ + Sbjct: 186 VEFPETHYQGDYIGEIAGTLFIEHSDELASSDE---LGIFKETAEAVIFSSIRRTLERIG 242 Query: 254 IQHDIFISEDDFH---RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310 I HD F +E + G+ S + +ID L + ++ Sbjct: 243 ITHDSFFNEHTLYQWNEGEASGNQKVIDALEAKDFI----------------GRYDGATW 286 Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 F +T +G + D+ L+KS G +Y D+AY K+ERGFD M+ V G+DH + Sbjct: 287 FMTTKLGQEKDKVLIKSSGDPSYRLPDIAYHVTKFERGFDLMVNVFGADHIDEYPDVLEA 346 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430 + +++ + + + V G +KMS R G+ L ++++VG+D+ R + R Sbjct: 347 LKILGYDASKVKIAINQFVTTTVGGQTVKMSTRKGNADLLDDLIEDVGADATRLFFIMRS 406 Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490 L+FD K+QSK+NPVFY+QYA+AR S+ R A+ ++ FD Sbjct: 407 KDSHLNFDVELAKKQSKDNPVFYLQYAHARICSLVRLAE---KEVGFDEAAATGASLPLL 463 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550 E+ L L ++P VI++ EP K+ YL+ +A +H + +E P L+ Sbjct: 464 DSEPEIDLASALLDFPDVIQSCLRLLEPQKMVEYLHTVAERYHKFY---QECPILK---- 516 Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + RL+L V ++ +G I+G+ +P M Sbjct: 517 ADENIRTARLELSLTVRQVLRNGFRILGISAPESM 551 >gi|306819519|ref|ZP_07453226.1| arginine--tRNA ligase [Mobiluncus mulieris ATCC 35239] gi|307701227|ref|ZP_07638249.1| arginine--tRNA ligase [Mobiluncus mulieris FB024-16] gi|304647811|gb|EFM45129.1| arginine--tRNA ligase [Mobiluncus mulieris ATCC 35239] gi|307613621|gb|EFN92868.1| arginine--tRNA ligase [Mobiluncus mulieris FB024-16] Length = 559 Score = 502 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 182/590 (30%), Positives = 290/590 (49%), Gaps = 45/590 (7%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILD---RIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + R+ L + + ++ +D ++ +ERP+ HG +TN AM L++ G+ P Sbjct: 5 ELTKRIIAALTVVAKENSLDLNEVDLGAKVKVERPKSREHGDWATNIAMQLAKTAGVKPR 64 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +AE+ V I V+S +AG GFIN+ L +++ I+ +G +G+N +G Sbjct: 65 DLAEMFVKAISGIEGVESAEVAGPGFINIRLEAGAAGALVADILAAGDNFGQNQSFQGQH 124 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 +N+E+VSANPTGP+H+G R A VGD+LA LM SG +VTREYY ND G QI+ A S+ Sbjct: 125 INLEYVSANPTGPIHLGGARWAAVGDSLARLMKSSGAKVTREYYFNDHGTQIDRFAASLL 184 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY----SSELLNFPEEKWLPIVKDYSV 238 + PE Y G Y+ + ++ + + P+ + + V Sbjct: 185 AAARGL------PAPEDGYGGQYIADIAAQVQTQAQQAGDPDPATLPDAAAQEYFRAHGV 238 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 M I+ L + D+F E+ + + + I+ L G + Sbjct: 239 TLMFSEIKAALAKFRTEFDVFFHENSLY--ETGKVEAAIEFLDGLGEIAH---------- 286 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 +T GDD DR L+KSDG+ YFAAD+AY++ K ERG D IY++G+ Sbjct: 287 ------KDGATWLLTTKHGDDKDRVLIKSDGNAAYFAADIAYYRDKRERGADCAIYLLGA 340 Query: 359 DHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 DH GY+ R+ A+ AA + + +L+ +LV LYR G +KMSKRAG+ +TL V+ V Sbjct: 341 DHHGYIGRMMAMCAAFGDTPGVNLQILIGQLVNLYRSGQLVKMSKRAGNIVTLDDFVEAV 400 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G D+ R+ ++ LD D + + ENPV+YVQYA+AR ++ + A Sbjct: 401 GVDAARYSLVRSSMDTQLDIDLDVLASHTNENPVYYVQYAHARTCNVAKNAASHGVSRGA 460 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 P + +LI LA++P + A + P+ +A YL +LA +H + Sbjct: 461 GFDPGQLRAAADG------ELIGVLAQFPTTVAQAATERAPHLVARYLENLAGAYHAWYG 514 Query: 538 HGRENPRLRFVQANNR--KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R P ++ L L AV ++ +GLN++GV +P M Sbjct: 515 KRRVTPA-----GDDPVTAEHAALLALNDAVTVVLRNGLNLLGVSAPERM 559 >gi|124514654|gb|EAY56166.1| Arginyl-tRNA synthetase [Leptospirillum rubarum] Length = 595 Score = 502 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 206/597 (34%), Positives = 309/597 (51%), Gaps = 29/597 (4%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 S L++YL+E + + I +E P+ G +ST AM LS L P IAE Sbjct: 10 ISDALRSYLQERGQGEDLATLLPKGIRLEFPKKDGFGDISTPVAMHLSAHLKTPPRKIAE 69 Query: 67 LIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 + + + P SV IAG G++N S +RK L I+ + + K +V +E Sbjct: 70 SLSSFLSGSPLFQSVEIAGPGYLNFTYSEMSVRKTLLRILDTDSDLVFPEDEK-RRVLVE 128 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS--VFWR 184 FVSANPTGP+HVGH R A GD L+ ++ G++VT EYYINDAG Q+ L S + WR Sbjct: 129 FVSANPTGPLHVGHGRGAAYGDALSRILKAVGHDVTTEYYINDAGNQMEMLGRSTCLAWR 188 Query: 185 YQQALYNNDSD--LPEGY--YPGVYLKHVGKELAD-------KYSSELLN--FPEEKWLP 231 + +G Y G Y++ + +E+ D + S L+ PE +L Sbjct: 189 KLHRAVPESEEQAFLKGATPYKGDYIREIAQEMIDTPGILSPEESRAALDPEAPETLYLG 248 Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291 +Y+ +M+ IR+DL ++ D F SE H D + + + E + Sbjct: 249 TFTEYAQGRIMEGIREDLHLFDVPFDAFFSEKILHEKKNGKNSDAVTLWINR--IREASM 306 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDN 351 + + + L R+T++GDD DR LL+SDG TYFAAD+AY K ER FD Sbjct: 307 QASDPEVPDVYESE-GALWLRTTVLGDDKDRVLLRSDGRLTYFAADIAYHALKIERKFDV 365 Query: 352 MIYVMGSDHSGYVKRLEAVAAAVS---EKKAQINVLLCELVRLYRDGMPIKMSKRAGDFI 408 +I V G+DH GY+ R+ A +S + + V L +LV L RDG P+ MS R G+F+ Sbjct: 366 LIDVWGADHHGYIPRMNAAVKTLSRLLDHPVEFRVALIQLVSLVRDGRPVSMSTRGGEFV 425 Query: 409 TLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQA 468 TLR V+DEVG D+ RF L R + L+FD K KE+S +NPV+YVQYA+AR +S+ RQA Sbjct: 426 TLREVLDEVGVDATRFSYLSRSHESPLEFDLNKAKERSMDNPVYYVQYAHARVKSLLRQA 485 Query: 469 KDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDL 528 L + R++ E+ + +E L+ L + V+ + + E + + YL DL Sbjct: 486 DTRGLSLPSEWSSRDL---EALREPAEKDLVKRLDRFSGVVNDVSRTMEVHPMTEYLTDL 542 Query: 529 ASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 A +H + H R + + +R+LT R+ L AV ++ GL ++G+ +P M Sbjct: 543 AGRYHHFYFHHRILSQ----EPQDRELTTARIALSIAVGRVLEKGLGLLGISAPEVM 595 >gi|194335027|ref|YP_002016887.1| arginyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271] gi|229470732|sp|B4S6D8|SYR_PROA2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|194312845|gb|ACF47240.1| arginyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271] Length = 551 Score = 502 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 183/583 (31%), Positives = 293/583 (50%), Gaps = 36/583 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 L +++ +E I IE+P + G STN A+ L++ +P +AE Sbjct: 1 MQEYLIASIQQALLASGIEP--PKEITIEKPSNKQFGDFSTNIALTLAKECRKNPRQLAE 58 Query: 67 LIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 I A+++ P+ D IAG GFIN YL+P+++ + + ++ G ++G+ GKG K + Sbjct: 59 EISAKLEFRPETVDKTTIAGPGFINFYLTPAFIMQSVEQVLNEGDQFGKTCTGKGQKAIV 118 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 E+VSANPTGP+ +G R V+GD +A+L+ GY+VTREYY NDAG Q+ LA SV RY Sbjct: 119 EYVSANPTGPLTIGRGRGGVLGDCIANLLESQGYKVTREYYFNDAGRQMTILAESVRLRY 178 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245 + P+ +Y G Y+ + +L +K+ EL + L K + + I Sbjct: 179 LE-CCGEAIAFPDTHYQGDYISDIAAKLFEKHGVELKEVSQ---LDEFKQIAETYIFASI 234 Query: 246 RDDLKALNIQHDIFISEDDFHR---GDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 ++ L LNI HD F +E ++ SP +ID L + GY+ Sbjct: 235 KNTLHRLNIHHDSFFNEHKLYQTGQNGKSPNEQVIDALDKAGYISNY------------- 281 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 + F +T +G + D+ L+KS G +Y D+AY KYER F +I V G+DH Sbjct: 282 ---DGAVWFTTTKLGQEKDKVLIKSTGEPSYRLPDIAYHVTKYERAFSEIINVFGADHID 338 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 + + +I V + + V +G +KMS R G+ L ++D+VG+D+ Sbjct: 339 EYPDVIEALRILGYDPGRIKVAINQFVTTTVNGETVKMSTRKGNADLLDDLIDDVGADAT 398 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 R + R L+FD K+QS++NPVFY+QYA+AR S+ + A+ ++ F Sbjct: 399 RLFFIMRSKDSHLNFDVELAKKQSRDNPVFYLQYAHARICSLVKLAE---QEIGFTQSDI 455 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 V ++ ELQL + L ++P VI +A EP K+ YL+ +A ++H + +E Sbjct: 456 GVHLMQNLDSPHELQLGLALLDFPEVISSAVRMLEPQKMVEYLHHVAELYHRFY---QEC 512 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P L+ + RL L A ++ +G I+GV +P M Sbjct: 513 PILK----AEPDICKARLFLSLATRQVLQNGFRILGVTAPTAM 551 >gi|227876244|ref|ZP_03994360.1| arginine--tRNA ligase [Mobiluncus mulieris ATCC 35243] gi|227843205|gb|EEJ53398.1| arginine--tRNA ligase [Mobiluncus mulieris ATCC 35243] Length = 559 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 182/590 (30%), Positives = 290/590 (49%), Gaps = 45/590 (7%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILD---RIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + R+ L + + ++ +D ++ +ERP+ HG +TN AM L++ G+ P Sbjct: 5 ELTKRIIAALTVVAKENSLDLNEVDLGAKVKVERPKSREHGDWATNIAMQLAKTAGVKPR 64 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +AE+ V I V+S +AG GFIN+ L +++ I+ +G +G+N +G Sbjct: 65 DLAEMFVKAISGIEGVESAEVAGPGFINIRLEAGAAGALVADILAAGDNFGQNQSFQGQH 124 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 +N+E+VSANPTGP+H+G R A VGD+LA LM SG +VTREYY ND G QI+ A S+ Sbjct: 125 INLEYVSANPTGPIHLGGARWAAVGDSLARLMKSSGAKVTREYYFNDHGTQIDRFAASLL 184 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY----SSELLNFPEEKWLPIVKDYSV 238 + PE Y G Y+ + ++ + + P+ + + V Sbjct: 185 AAARGL------PAPEDGYGGQYIADIAAQVQTQAQQAGDPDPATLPDAAAQEYFRAHGV 238 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 M I+ L + D+F E+ + + + I+ L G + Sbjct: 239 TLMFSEIKAALAKFRTEFDVFFHENSLY--ETGKVEAAIEFLDGLGEIAH---------- 286 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 +T GDD DR L+KSDG+ YFAAD+AY++ K ERG D IY++G+ Sbjct: 287 ------KDGATWLLTTKHGDDKDRVLIKSDGNAAYFAADIAYYRDKRERGADCAIYLLGA 340 Query: 359 DHSGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEV 417 DH GY+ R+ A+ AA + + +L+ +LV LYR G +KMSKRAG+ +TL V+ V Sbjct: 341 DHHGYIGRMMAMCAAFGDTPGVNLQILIGQLVNLYRSGQLVKMSKRAGNIVTLDDFVEAV 400 Query: 418 GSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDF 477 G D+ R+ ++ LD D + + ENPV+YVQYA+AR ++ + A Sbjct: 401 GVDAARYSLVRSSMDTQLDIDLDVLASHTNENPVYYVQYAHARTCNVAKNAAAHGVSRGA 460 Query: 478 DLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWS 537 P + +LI LA++P + A + P+ +A YL +LA +H + Sbjct: 461 GFDPGQLRAAADG------ELIGVLAQFPTTVAQAATERAPHLVARYLENLAGAYHAWYG 514 Query: 538 HGRENPRLRFVQANNR--KLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R P ++ L L AV ++ +GLN++GV +P M Sbjct: 515 KRRVTPA-----GDDPVTAEHAALLALNDAVTVVLRNGLNLLGVSAPERM 559 >gi|219683104|ref|YP_002469487.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis AD011] gi|254782942|sp|B8DWR0|SYR_BIFA0 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|219620754|gb|ACL28911.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis AD011] gi|289177559|gb|ADC84805.1| Arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis BB-12] Length = 598 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 179/614 (29%), Positives = 306/614 (49%), Gaps = 72/614 (11%) Query: 13 NYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 N + E +++ D + + RP+D AHG ++NAAM L++ G+ P +A+L Sbjct: 16 NLVSEGKAGTLTAEELPDSAKFAVMRPKDRAHGDWASNAAMQLAKKAGMKPRDLAQLFAD 75 Query: 71 RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130 + + +V +AG GFIN+ L + ++ ++ G +G+N G +N+EFVSA Sbjct: 76 ALNGTDGIAAVEVAGPGFINITLDSASAAAVVDQVLDEGNRFGKNNHLSGKTLNLEFVSA 135 Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190 NPTGP+H+G R A VGD++A ++ +G V REYY ND G QIN A S+ Sbjct: 136 NPTGPIHIGGTRWAAVGDSMARILQANGATVVREYYFNDHGEQINRFAKSLVAAAH---- 191 Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSS-------------------ELLNFPEEKWLP 231 D P Y G Y+ + + + + ++ E L + + Sbjct: 192 --DEPTPVDGYKGAYIDEIARRVIVEANAEGIDILNLPRVDGGTDEKGEPLGEGDSEQRE 249 Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291 + +V M IR +K + D++ E+ + + + I +L G +YE Sbjct: 250 EFRKRAVPMMFDEIRQSMKEFRVHFDVWFHENSLY--EDGEVEKAIADLRNAGDIYE--- 304 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG--- 348 F ST GDD DR ++KSDG+Y YFAAD+AY++ K R Sbjct: 305 -------------KDGATWFESTEHGDDKDRVIIKSDGTYAYFAADIAYYRNKRHRKTDP 351 Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDF 407 D IY++G+DH GY+ R+ A+ AA +K + + +L+ ++V + +DG P++MSKRAG+ Sbjct: 352 ADVAIYMLGADHHGYIGRMMAMCAAFGDKPGENMQILIGQMVNVMKDGKPVRMSKRAGNI 411 Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467 +T+ ++D +G D+ R+ + + +D D + S +NPV+YVQYA+AR ++ R Sbjct: 412 VTIDDLIDAIGVDASRYSLARTDYNSPVDIDLNLLASHSNDNPVYYVQYAHARSCNVDRN 471 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 A+ + ++ ++E D ++I LA++P ++ A + P+++A YL D Sbjct: 472 AE----AAQINAADADLSLLDTEADG---EVIAALAQWPALLTLAGDLRAPHRIAHYLED 524 Query: 528 LASVFHGHWSHGRENP----------------RLRFVQANNRKLTMMRLQLVHAVASIIN 571 LA+ +H ++ R P R R + RL+L AV ++I Sbjct: 525 LAAAYHKWYNVERVVPMPLTEAEERADEQTRERTRIAKNPEPARAAARLKLNDAVQTVIA 584 Query: 572 SGLNIIGVESPNEM 585 GL+++GV +P++M Sbjct: 585 EGLDLLGVTAPDKM 598 >gi|183602799|ref|ZP_02964162.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis HN019] gi|241191434|ref|YP_002968828.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196840|ref|YP_002970395.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218037|gb|EDT88685.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis HN019] gi|240249826|gb|ACS46766.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251394|gb|ACS48333.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295794427|gb|ADG33962.1| arginyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis V9] Length = 590 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 179/614 (29%), Positives = 306/614 (49%), Gaps = 72/614 (11%) Query: 13 NYLKEIDCKIKVEKKILD--RIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVA 70 N + E +++ D + + RP+D AHG ++NAAM L++ G+ P +A+L Sbjct: 8 NLVSEGKAGTLTAEELPDSAKFAVMRPKDRAHGDWASNAAMQLAKKAGMKPRDLAQLFAD 67 Query: 71 RIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSA 130 + + +V +AG GFIN+ L + ++ ++ G +G+N G +N+EFVSA Sbjct: 68 ALNGTDGIAAVEVAGPGFINITLDSASAAAVVDQVLDEGNRFGKNNHLSGKTLNLEFVSA 127 Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALY 190 NPTGP+H+G R A VGD++A ++ +G V REYY ND G QIN A S+ Sbjct: 128 NPTGPIHIGGTRWAAVGDSMARILQANGATVVREYYFNDHGEQINRFAKSLVAAAH---- 183 Query: 191 NNDSDLPEGYYPGVYLKHVGKELADKYSS-------------------ELLNFPEEKWLP 231 D P Y G Y+ + + + + ++ E L + + Sbjct: 184 --DEPTPVDGYKGAYIDEIARRVIVEANAEGIDILNLPRVDGGTDEKGEPLGEGDSEQRE 241 Query: 232 IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGIL 291 + +V M IR +K + D++ E+ + + + I +L G +YE Sbjct: 242 EFRKRAVPMMFDEIRQSMKEFRVHFDVWFHENSLY--EDGEVEKAIADLRNAGDIYE--- 296 Query: 292 PPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERG--- 348 F ST GDD DR ++KSDG+Y YFAAD+AY++ K R Sbjct: 297 -------------KDGATWFESTEHGDDKDRVIIKSDGTYAYFAADIAYYRNKRHRKTDP 343 Query: 349 FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDF 407 D IY++G+DH GY+ R+ A+ AA +K + + +L+ ++V + +DG P++MSKRAG+ Sbjct: 344 ADVAIYMLGADHHGYIGRMMAMCAAFGDKPGENMQILIGQMVNVMKDGKPVRMSKRAGNI 403 Query: 408 ITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQ 467 +T+ ++D +G D+ R+ + + +D D + S +NPV+YVQYA+AR ++ R Sbjct: 404 VTIDDLIDAIGVDASRYSLARTDYNSPVDIDLNLLASHSNDNPVYYVQYAHARSCNVDRN 463 Query: 468 AKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYD 527 A+ + ++ ++E D ++I LA++P ++ A + P+++A YL D Sbjct: 464 AE----AAQINAADADLSLLDTEADG---EVIAALAQWPALLTLAGDLRAPHRIAHYLED 516 Query: 528 LASVFHGHWSHGRENP----------------RLRFVQANNRKLTMMRLQLVHAVASIIN 571 LA+ +H ++ R P R R + RL+L AV ++I Sbjct: 517 LAAAYHKWYNVERVVPMPLTEAEERADEQTRERTRIAKNPEPARAAARLKLNDAVQTVIA 576 Query: 572 SGLNIIGVESPNEM 585 GL+++GV +P++M Sbjct: 577 EGLDLLGVTAPDKM 590 >gi|308177030|ref|YP_003916436.1| arginine--tRNA ligase [Arthrobacter arilaitensis Re117] gi|307744493|emb|CBT75465.1| arginine--tRNA ligase [Arthrobacter arilaitensis Re117] Length = 547 Score = 502 bits (1292), Expect = e-139, Method: Composition-based stats. Identities = 186/581 (32%), Positives = 310/581 (53%), Gaps = 39/581 (6%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 + S+ + L E ++ ++ + + ++RP+ HG +TN A+ L + G+ P A Sbjct: 5 ELSAAISACLTEAVAAGEISVEVPETVRVDRPKSREHGDWATNIALQLGKKAGMAPRDFA 64 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 +++ R+ P V +V IAG GF+N+ L ++ +IV +G YG N G VN+ Sbjct: 65 QILATRLASVPGVGAVDIAGPGFLNITLEAGAAGELARTIVEAGSAYGSNEALAGHVVNM 124 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 EFVSANPTGP+H+GH R A +GD ++ ++ SG VT EYYINDAG Q+N A SV+ R Sbjct: 125 EFVSANPTGPLHIGHTRWAALGDAISRVLRASGASVTSEYYINDAGNQMNVFARSVYNRI 184 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245 +PEG YPG Y+K +G + + + EL + E + +P ++D + +A + I Sbjct: 185 HGL------PVPEGGYPGEYIKELGDAVLAE-NPELKDLEEAEAIPALRDAAYKAQLADI 237 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 + L + D+F SE H + + D + L QG++++ Sbjct: 238 KSTLADFGVSFDVFFSETTLH--ERGAVADAVARLREQGHIFDL---------------- 279 Query: 306 RKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVK 365 + R+T GDD DR L++++G TYFAAD AY+ K +RGF+ IY++G+DH GYV Sbjct: 280 EGAVWLRTTDFGDDKDRVLIRANGEPTYFAADAAYYLSKKDRGFEEKIYLLGADHHGYVN 339 Query: 366 RLEAVAAAVSEKKAQ-INVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRF 424 RL+A+AA + K + I VL+ +L+ + K+SKRAG+ I LR +++ +G+D++R+ Sbjct: 340 RLKAIAACAGDDKDKNIEVLIGQLISV----NGAKLSKRAGNIIELRDLINWIGADALRY 395 Query: 425 MMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNV 484 + + D ++K+ + +NPVFYVQYA+AR + + RN Sbjct: 396 SLARFPADSPIALDPEQLKKNTNDNPVFYVQYAHAR-------SAAAARNAAAKGVTRND 448 Query: 485 IPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPR 544 D +E +L+ L ++P V+ + +EP+++A YL +A +H ++ R P Sbjct: 449 FDAALLTDPTENELLAVLGQFPSVVAGSAEFREPHRIARYLEQVAGAYHSWYAATRITPM 508 Query: 545 LRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL L A +++ +GL ++GV +P M Sbjct: 509 GE--DEAIAPVHGTRLWLNDAATTVLANGLELLGVSAPERM 547 >gi|325679007|ref|ZP_08158605.1| arginine--tRNA ligase [Ruminococcus albus 8] gi|324109511|gb|EGC03729.1| arginine--tRNA ligase [Ruminococcus albus 8] Length = 589 Score = 501 bits (1291), Expect = e-139, Method: Composition-based stats. Identities = 187/610 (30%), Positives = 302/610 (49%), Gaps = 57/610 (9%) Query: 4 FADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLT 63 F + N + + + + + IE P D +G +STNAAM+ ++P P Sbjct: 9 FTQARELVMNAMGALVAEGVFPAEAVPAFNIEIPADSKNGDVSTNAAMVCAKPFRNAPRK 68 Query: 64 IAELIVARIKIDPDV-DSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 IAE IV +I + + V IAG GFIN + + + ++ +++ +G +YG+ GKG + Sbjct: 69 IAEAIVGKIVTEGSCFEKVEIAGPGFINFFYNKGWYASVVKAVLDAGADYGKTEFGKGKR 128 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 +EFVSANPTGPMH+G+ R +GD LA++M ++GYEV RE+YINDAG QI S+ Sbjct: 129 ALVEFVSANPTGPMHIGNARGGAIGDCLAAVMEYAGYEVEREFYINDAGNQIEKFGKSLR 188 Query: 183 WRYQQ---------------------ALYNNDS-----DLPEGYYPGVYLKHVGKELADK 216 RY Q +Y D +P+ Y G+ + K D+ Sbjct: 189 LRYMQICSEAGQAIVAKNLDLDAFCKEIYGEDGNRPEFPMPDDVYLGMDIIAHAKNFFDE 248 Query: 217 YSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDI 276 Y PEE + DY++ ++ + DDL I++D + E H + + + Sbjct: 249 YGMIASAQPEEDCKKALVDYALPKNIQGLHDDLAKYRIEYDTWFRESTLH--NDGSVAKV 306 Query: 277 IDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAA 336 I+ L GY YE L F++T GD+ DR L++ +G TYF Sbjct: 307 IEQLKASGYTYE----------------QDGALWFKTTEFGDEKDRVLVRDNGIPTYFVP 350 Query: 337 DLAYFKCKY-ERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDG 395 D+AY K ER FD I + G+DH GY+ RL+A A+ ++++++ ++VRL ++G Sbjct: 351 DIAYHYNKLAERKFDKAIDIFGADHHGYIPRLKAAMTALGVDAKKLDIVIMQMVRLVKNG 410 Query: 396 MPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455 K+SKR+G ITL +++E+ D+ RF R+ + DFD S +NPV+YVQ Sbjct: 411 ETYKLSKRSGKAITLNTLLEEIPIDAARFFFNLREPNSQFDFDLDLAISNSSQNPVYYVQ 470 Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515 YA+AR S+ ++ K+ + E+ + EL+L+ +A P I +A A Sbjct: 471 YAHARICSVIKKLKEEGVEA----KAFTDEMAEALNTSEELELVKLMATLPTTINDAAKA 526 Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575 +P K+ Y D+A+++H ++ R ++ + RL L AV II + L Sbjct: 527 YDPAKVTKYAVDIATLYHKFYNACR-------IKGEPENVMQARLSLSLAVKQIIANILG 579 Query: 576 IIGVESPNEM 585 ++ + P M Sbjct: 580 MLKINCPESM 589 >gi|296137179|ref|YP_003644421.1| arginyl-tRNA synthetase [Thiomonas intermedia K12] gi|295797301|gb|ADG32091.1| arginyl-tRNA synthetase [Thiomonas intermedia K12] Length = 595 Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats. Identities = 188/613 (30%), Positives = 302/613 (49%), Gaps = 58/613 (9%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + +F++RL L++ ++ + I + RPR HG L++N AM L++PL +P Sbjct: 11 IMIEFTARLTTALQQAATA--LQPEFSGSIELSRPRSDDHGELASNLAMQLAKPLKRNPR 68 Query: 63 TIAELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIG 118 +A+ I+ ++ + D + IAG GFIN +L + L++++ + ++G + G Sbjct: 69 DVAQQIIDALRTNADLAEGIARTEIAGPGFINFHLHAAVLQQVIVEVEQGAAKFGHSRAG 128 Query: 119 KGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLA 178 + + +EFVSANPTGP+HVGH R +GD +A+++ G+ V RE+Y NDAG QI TLA Sbjct: 129 REQPMLVEFVSANPTGPLHVGHGRQGALGDAIAAVLTTQGWAVQREFYYNDAGVQIQTLA 188 Query: 179 LSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPI 232 LSV R + D+ PE Y G Y+ + ++ D ++ + L Sbjct: 189 LSVQARAR-GYKPGDAQWPESAYNGDYIADIARDFLACESVPDDQGQPIVANGQADDLDN 247 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 ++ ++V + + DLK I+ D + E + + D + L G+ YE Sbjct: 248 IRRFAVAYLRREQDLDLKTFGIRFDNYYLESSLYT--DGRVEDAVQRLQASGHTYE---- 301 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 L R+T GDD DR + KSDG+YTYF D+AY K++RGF Sbjct: 302 ------------QDGALWLRTTQYGDDKDRVMRKSDGTYTYFVPDVAYHLAKWQRGFHRA 349 Query: 353 IYVMGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITL 410 + + GSDH G + R+ A A+ + +L ++V + R G +K+SKRAG ++T+ Sbjct: 350 VNIQGSDHHGTIARVRAGLQALDLGIPTGYPDYVLHKMVTVMRGGQEVKISKRAGSYVTV 409 Query: 411 RHVVDE------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452 R +++ G D+VRF ++ RK FD QS ENPV+ Sbjct: 410 RDLIEWSGGVRDDMSDEQRQAALQRGRDAVRFFLVSRKADTEFVFDVDLALAQSDENPVY 469 Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512 YVQYA+AR S+F Q P E L++ LA YP+V+ A Sbjct: 470 YVQYAHARVNSVFEQWAARAPQEAAQPALIEQADLSLLIAPRERALLLTLARYPQVLAAA 529 Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572 P+++AFYL DLA+ FH ++ R V + L RL+L+ AV ++++ Sbjct: 530 AQELAPHQVAFYLRDLAADFHAFYNAER-------VLVDELPLRHARLRLLRAVRQVMHN 582 Query: 573 GLNIIGVESPNEM 585 L ++GV +P M Sbjct: 583 ALAVLGVSAPQRM 595 >gi|119896671|ref|YP_931884.1| arginyl-tRNA synthetase [Azoarcus sp. BH72] gi|166232755|sp|A1K2E2|SYR_AZOSB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|119669084|emb|CAL92997.1| putative arginine-tRNA ligase [Azoarcus sp. BH72] Length = 587 Score = 501 bits (1290), Expect = e-139, Method: Composition-based stats. Identities = 203/622 (32%), Positives = 313/622 (50%), Gaps = 74/622 (11%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + AD L + +K + E I++ERP+ +HG +TN A+ L++PL +P Sbjct: 1 MSADPKVLLTDLIKTALKSVAPEHADT-AILLERPKQASHGDFATNVALQLAKPLKRNPR 59 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +A L++A + V +AG GFIN L+ + ++ ++ G ++GR K K Sbjct: 60 ELAALLLAELPASNLVAKTEVAGAGFINFTLAAAAKTAVVGEVLAKGADFGR-GAKKNVK 118 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V +EFVSANPTGP+HVGH R A G +L+ ++ F+GY+VTREYY+NDAG Q++ LALS + Sbjct: 119 VQVEFVSANPTGPLHVGHGRGAAYGASLSDVLCFAGYDVTREYYVNDAGRQMDILALSTW 178 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSEL------------------LNF 224 RY AL+ D P Y G Y+ + + L D + Sbjct: 179 LRYL-ALFGIDVPFPPNAYQGDYVIDMARGLRDAHQGRYAGVTLAQVLEGTPGLPVAERK 237 Query: 225 PEE---------------------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 +E + P V +++ + RDDL+ + D + SE Sbjct: 238 DDEAKQQRELHLDGLIANAKRLLGEDYPFVHGFALNEQLGDGRDDLQEFGVHFDKWFSEK 297 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323 D + + L ++G++Y + FRST GD+ DR Sbjct: 298 SLF--DTGLVERAVAELEKRGHIY----------------VQDGAKWFRSTDFGDEKDRV 339 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383 + + +G YTYFA+D+AY KYERGFD +I + G+DH GY+ R++ AA+ ++ V Sbjct: 340 VQRENGLYTYFASDIAYHLNKYERGFDRIIDIWGADHHGYIPRVKGAIAALGLPPEKLEV 399 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443 L + LYRDG MS R+G+F+TLR + EVG+D+ RF + RK+ + LDFD K Sbjct: 400 ALVQFAVLYRDGQKTSMSTRSGEFVTLRELRREVGNDACRFFYVLRKSDQHLDFDLDLAK 459 Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503 QS ENPV+Y+QYA+AR S+ Q +L + + EL L LA Sbjct: 460 SQSNENPVYYIQYAHARVCSVLNQWGGEPAELQAADLGK-------LENERELALCARLA 512 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 +P V++ A P+++AFYL DLA+ FH ++ R + ++ + + RL L Sbjct: 513 GFPEVVQGAAADYAPHQIAFYLKDLAADFHSWYNAER-------MLVDDEAVKLARLALA 565 Query: 564 HAVASIINSGLNIIGVESPNEM 585 AV S++ GL ++GV +P M Sbjct: 566 AAVRSVLRGGLAVLGVSAPESM 587 >gi|261368273|ref|ZP_05981156.1| arginine--tRNA ligase [Subdoligranulum variabile DSM 15176] gi|282569790|gb|EFB75325.1| arginine--tRNA ligase [Subdoligranulum variabile DSM 15176] Length = 585 Score = 500 bits (1289), Expect = e-139, Method: Composition-based stats. Identities = 187/583 (32%), Positives = 293/583 (50%), Gaps = 19/583 (3%) Query: 8 SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 + L + K + + + L ++E P D +G +++N AM +R P IAE Sbjct: 17 RTLLTDAAKAAMAEGTLPQADLPDFIVEIPADVKNGDVASNLAMAGARVFHKAPRQIAEA 76 Query: 68 IVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIE 126 I A++ ++ V IAG GFINL+L + +L + + EYGR G G + N+E Sbjct: 77 ITAKLDLNGTLFAGVDIAGPGFINLFLGQDWFTSVLRAACAN-PEYGRTDAGAGKRYNVE 135 Query: 127 FVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQ 186 FVSANPTGPMH+G+ R +GD LA+ + ++GY+VTRE+YINDAG QI S+ RY Sbjct: 136 FVSANPTGPMHMGNARGGALGDCLAACLDWAGYDVTREFYINDAGNQIEKFGKSLAIRYL 195 Query: 187 QALYNNDS-DLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245 Q ++ LP Y G + KE A+ + +N E+ + ++ + + Sbjct: 196 QLYKGEEACPLPAECYQGADIIQRAKEFAEVHGDAYVNADFEELKKAIVADALPKNIAGL 255 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMD 305 + DL IQ+D++ E D H+ ++ ++D L G Y+ ++ Q Sbjct: 256 QRDLGKYRIQYDVWFHESDLHK--SGAVQAVVDKLLETGACYKAEDGAIMYRSAQYAAKY 313 Query: 306 RKQLLFRSTMVGDD--VDRPLLKSDGSYTYFAADLAYFKCKYE-RGFDNMIYVMGSDHSG 362 ++ ++ D L++++G TYFAAD+AY K RGFD I V G+DH G Sbjct: 314 GVANKRKTEDGSEEEAKDEVLVRANGIPTYFAADIAYHYNKLAVRGFDKAIDVWGADHHG 373 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 +V R++ A+ Q++V+L ++V L RDG P++MSKR G ITL ++DEV DS Sbjct: 374 HVARMKGAMDAIGLHGEQLDVVLMQMVNLMRDGKPVRMSKRTGKAITLTDLLDEVPIDSA 433 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 RF R++S LDFD ENPV+YVQYA+AR S+ ++ ++ Sbjct: 434 RFFFNQRESSSTLDFDLDLAVRNDSENPVYYVQYAHARICSLLKKLEEQG----VAFQGV 489 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 + I D SE LI LA +P I A +P ++ Y D+A+ FH ++ R Sbjct: 490 DSIDASVLTDPSEQALIRLLAAFPAEIVAAADKYDPARITRYCIDVATAFHRFYNACR-- 547 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + + R+ L AV +I++ L + V +P M Sbjct: 548 -----ILDAEGAVQQNRIALSLAVRGVIHNILTMFKVNAPESM 585 >gi|291544037|emb|CBL17146.1| arginyl-tRNA synthetase [Ruminococcus sp. 18P13] Length = 562 Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats. Identities = 184/590 (31%), Positives = 300/590 (50%), Gaps = 36/590 (6%) Query: 2 YLFADFSSRLKNYL----KEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPL 57 L S +L+ L + V + + IE P D +HG +TNAAM+ ++P Sbjct: 3 NLIKQASDQLREILLGSMGRLVASGAVPPEPVSDFKIEIPADKSHGDFATNAAMVCAKPF 62 Query: 58 GLDPLTIAELIVARIKIDP-DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNL 116 + P IAE I+ + ++ D IAG GFIN +LSP + +++++++ YGR Sbjct: 63 RMAPRAIAEKILGELVLEGTYFDRAEIAGPGFINFFLSPRWFAQVVNTVLEETGTYGRTD 122 Query: 117 IGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINT 176 G+G +V +EFVSANPTGPMHVG+ R +GD LASL+ ++GY+V RE+YINDAG QI Sbjct: 123 TGEGKRVLVEFVSANPTGPMHVGNARGGAIGDCLASLLDWAGYQVEREFYINDAGNQIEK 182 Query: 177 LALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDY 236 A S+ RY Q LY + +LPE Y G+ + K A + ++ + + Y Sbjct: 183 FATSLEVRYLQ-LYRDGVELPEDAYQGMDIVEHAKAFAAENGDRYVDADAKTRRDALVAY 241 Query: 237 SVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKS 296 ++ ++ ++ DL IQ+D + E H + +I+ L GY YE Sbjct: 242 ALPKNIEGLKRDLGKYRIQYDTWFRESTLHA--DGSVMEIVRKLRDSGYTYE-------- 291 Query: 297 KTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCK-YERGFDNMIYV 355 F++T G D D L++S+G TY D+AY K RGFD I V Sbjct: 292 --------QDGATWFKATEFGADKDFVLVRSNGIPTYVVPDIAYHYNKLVTRGFDKAIDV 343 Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVD 415 +G+DH GYV RL+A A+ ++++V+L ++V + R+G K+SKR+G ITL +++ Sbjct: 344 LGADHHGYVPRLKAALTALGVDASKLDVVLMQMVFVMRNGQVAKLSKRSGKAITLVTLLE 403 Query: 416 EVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDL 475 E+ D+ RF R+ + +FD E+S +NPV+YVQYA+AR S+ R + + Sbjct: 404 EIPIDAARFFFNLREANSHFEFDLDLAVEKSSQNPVYYVQYAHARICSLLRNLAEEG--I 461 Query: 476 DFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGH 535 ++ Q ++ E++LI ++A P+ I+ A +P ++ Y +LA++FH Sbjct: 462 QPTELTGELMQQFTQ--PQEIELIRYIAMLPQEIDTAAKHYDPSRITKYTVELATLFHKF 519 Query: 536 WSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + ++A L + + L ++ + P +M Sbjct: 520 YDACTVKNAEPQLRAARLALCAA-------TRQALANALTMLKITCPEKM 562 >gi|294341477|emb|CAZ89894.1| putative arginyl-tRNA synthetase (ArgS) [Thiomonas sp. 3As] Length = 584 Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats. Identities = 190/610 (31%), Positives = 302/610 (49%), Gaps = 58/610 (9%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA 65 +F++RL L++ ++ + D I + RPR HG L++N AM L++PL +P +A Sbjct: 3 EFTARLTTALQQAATA--LQPEFSDSIELSRPRSDDHGELASNLAMQLAKPLKRNPRDVA 60 Query: 66 ELIVARIKIDPD----VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGT 121 + I+ ++ + D + IAG GFIN +L P+ L++++ + ++G + G+ Sbjct: 61 QQIIDALRTNADLAEGIARTEIAGPGFINFHLHPAVLQQVIVEVEQGAAKFGHSRAGREQ 120 Query: 122 KVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSV 181 + +EFVSANPTGP+HVGH R +GD +A+++ G+ V RE+Y NDAG QI TLALSV Sbjct: 121 PMLVEFVSANPTGPLHVGHGRQGALGDAIAAVLTTQGWAVQREFYYNDAGVQIQTLALSV 180 Query: 182 FWRYQQALYNNDSDLPEGYYPGVYLKHVGKELA------DKYSSELLNFPEEKWLPIVKD 235 R + D+ PE Y G Y+ + ++ D ++ + L ++ Sbjct: 181 QARAR-GYKPGDAQWPESAYNGDYIADIARDFLACESVPDDQGQPIVANGQADDLDNIRR 239 Query: 236 YSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPK 295 ++V + + DLK I+ D + E + + D + L G+ YE Sbjct: 240 FAVAYLRREQDLDLKTFGIRFDNYYLESSLYT--DGRVEDAVQRLQASGHTYE------- 290 Query: 296 SKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYV 355 L R+T GDD DR + KSDG+YTYF D+AY K++RGF + + Sbjct: 291 ---------QDGALWLRTTQYGDDKDRVMRKSDGTYTYFVPDVAYHLAKWQRGFHRAVNI 341 Query: 356 MGSDHSGYVKRLEAVAAAV--SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHV 413 GSDH G + R+ A A+ + +L ++V + R G +K+SKRAG ++T+R + Sbjct: 342 QGSDHHGTIARVRAGLQALDLGIPTGYPDYVLHKMVTVMRGGQEVKISKRAGSYVTVRDL 401 Query: 414 VDE------------------VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQ 455 ++ G D+VRF ++ RK FD QS ENPV+YVQ Sbjct: 402 IEWSGGVRDDMSDEQRQAALQRGRDAVRFFLVSRKADTEFVFDVDLALAQSDENPVYYVQ 461 Query: 456 YAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIA 515 YA+AR S+F Q P E L + LA YP+V+ A Sbjct: 462 YAHARVNSVFEQWAARAPQEAAQPALIEQADLSLLIAPRERALQLTLARYPQVLAAAAQE 521 Query: 516 QEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLN 575 P+++AFYL DLA+ FH ++ R V + L RL+L+ AV ++++ L Sbjct: 522 LAPHQVAFYLRDLAADFHAFYNAER-------VLVDELPLRHARLRLLRAVRQVMHNALA 574 Query: 576 IIGVESPNEM 585 ++GV +P M Sbjct: 575 VLGVSAPQRM 584 >gi|269468159|gb|EEZ79861.1| arginyl-tRNA synthetase [uncultured SUP05 cluster bacterium] Length = 570 Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats. Identities = 181/591 (30%), Positives = 304/591 (51%), Gaps = 63/591 (10%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + + LK L+ + + + I ++ +D HG ++N A++LS+ P Sbjct: 1 MKEQLQALLKQSLESLVND-DILSEAPKSIRLDHSKDKTHGDFASNIALVLSKQAKCSPQ 59 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +A+ I+ R+ ++ IAG GFIN ++S +L I+ GI YG IGKG Sbjct: 60 KLAQQIIDRLPNSGEIVKTEIAGPGFINFFMSQGSNTAVLEQILEQGIGYGCLDIGKGQS 119 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V +EFVSANPTGP+HVGH R A G T+A+L+ G++V EYY+NDAG Q++ LA SV+ Sbjct: 120 VLLEFVSANPTGPLHVGHGRGAAYGATVANLLRALGFKVDNEYYVNDAGRQMDILATSVY 179 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELA---------------------DKYSSEL 221 RY + P+ Y G Y+ + +++ +K+ +L Sbjct: 180 LRYIET-----DQFPDNGYKGDYIFDIAEQVKGVERLDIFTDVCADEKDGGDKEKHIDDL 234 Query: 222 LNFPEEK---WLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIID 278 + ++ V D ++ ++ I+ DL +++ + SE D + I Sbjct: 235 IANCKQALGDDYKKVFDLAIDDILSGIKTDLSEFGVEYQQWFSEQSL--IDSGRAKTTIK 292 Query: 279 NLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADL 338 +L G++YE L F++T D+ DR +++ +G +TYFA+D+ Sbjct: 293 SLQDSGHIYE----------------KDGALWFKTTDFNDEKDRVVVRDNGIHTYFASDI 336 Query: 339 AYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPI 398 AY K+ERG+D +I + G+DH GY+ R++A A+ K ++ +LL + LYR G + Sbjct: 337 AYHLEKFERGYDKIINIWGADHHGYIARVKASVEALGHKSEKLEILLVQFANLYRGGKKV 396 Query: 399 KMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAY 458 +MS R+G F+TL+ + EVG+D+ RF + RK+ + +DFD K ++ ENPVFY+QYA+ Sbjct: 397 QMSTRSGSFVTLKELRHEVGNDAARFFYVLRKSEQHMDFDLDLAKSKTNENPVFYIQYAH 456 Query: 459 ARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDT-SELQLIVHLAEYPRVIENATIAQE 517 AR S+ +QA + FP+ + P S D +E+ L+ L Y V++ + + E Sbjct: 457 ARICSVLKQADEKFPN-------NSTAPNLSLLDDKAEVALVKELNRYKDVLQTSALNYE 509 Query: 518 PYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 P+ LA+YL DL++ FH +++ + +L RL L+ + Sbjct: 510 PHVLAYYLRDLSASFHSYYNSCEF-------LVEDAQLRSSRLLLIKSAKQ 553 >gi|124265346|ref|YP_001019350.1| arginyl-tRNA synthetase [Methylibium petroleiphilum PM1] gi|166232805|sp|A2SC26|SYR_METPP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|124258121|gb|ABM93115.1| arginyl-tRNA synthetase [Methylibium petroleiphilum PM1] Length = 561 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 184/589 (31%), Positives = 288/589 (48%), Gaps = 43/589 (7%) Query: 8 SSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAEL 67 L L + ++ E+ + E P+ AHG L+ +AM L++PL +P +A+ Sbjct: 5 QQELLVALGDALAELAPEQPPIAAF--ESPKQAAHGDLAITSAMQLAKPLKRNPRELAQA 62 Query: 68 IVARIKIDP----DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 ++ ++ V ++ IAG GFINL L + ++I++ ++ SG ++GR + Sbjct: 63 LIDALQRREAVQRWVAALEIAGPGFINLRLKDTTKQQIVAEVLASGTDFGRQPATS-ERA 121 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 +EFVSANPTGP+HVGH R A +GD + L G++VTRE+Y NDAG QI TLA S Sbjct: 122 LVEFVSANPTGPLHVGHGRQAALGDAICKLFETQGWQVTREFYYNDAGVQIGTLAASTQA 181 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKEL-----ADKYSSELLNFPEEKWLPIVKDYSV 238 R Q L D+ PE Y G Y+ + + E + L ++ ++V Sbjct: 182 R-LQGLKPGDAGWPESAYNGDYIADIAADFLARKTVKADDREFTASGDPADLDGIRQFAV 240 Query: 239 QAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKT 298 + DL+A ++ D + E + + + L G +E Sbjct: 241 AYLRHEQDLDLQAFGVRFDHYFLESSLYA--TGRVEATVGKLVAAGKTFE---------- 288 Query: 299 TQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGS 358 D L R+T GDD DR + KSDGSYTYF D+AY K+ERG+ +I + GS Sbjct: 289 ------DGGALWLRTTDYGDDKDRVMKKSDGSYTYFVPDVAYHVNKWERGYHKVINIQGS 342 Query: 359 DHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDE 416 DH G + R+ A A V + +L ++V + R G +K+SKRAG ++TLR ++D Sbjct: 343 DHHGTIARVRAGLQAADVGIPAGYPDYVLHKMVTVMRGGEEVKISKRAGSYVTLRDLIDW 402 Query: 417 VGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLD 476 G D+VRF ++ RK FD +++ ENPV+YVQYA+AR S+ Q ++ Sbjct: 403 TGKDAVRFFLISRKADTEFVFDVDLALKKNDENPVYYVQYAHARICSVIVQWREQQAG-- 460 Query: 477 FDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHW 536 D +E L++ LA YP ++ A + P+ +AFYL DLA FH ++ Sbjct: 461 -DPATLAQADLARLVAPTEAALMLKLAAYPVMLSGAAESLAPHDVAFYLRDLAGAFHSYY 519 Query: 537 SHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + R + L A ++ +GL ++GV +P+ M Sbjct: 520 AAERFLTDDPALSRARLALLAA-------TAQVLRNGLAVLGVSAPDRM 561 >gi|239813480|ref|YP_002942390.1| arginyl-tRNA synthetase [Variovorax paradoxus S110] gi|239800057|gb|ACS17124.1| arginyl-tRNA synthetase [Variovorax paradoxus S110] Length = 561 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 184/602 (30%), Positives = 296/602 (49%), Gaps = 58/602 (9%) Query: 1 MYLFAD-FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGL 59 M L + L N L+ + + E P+ AHG ++ AAM L++PLG Sbjct: 1 MLLVKQELLAALANTLESLSPGAG------SKAAFESPKVAAHGDFASTAAMQLAKPLGR 54 Query: 60 DPLTIAELIVARIKIDP----DVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRN 115 P +AE + A + P V+++ +AG GF+N+ L + ++I+ ++ +G +G+ Sbjct: 55 KPRELAEELSAALLATPVFGQWVEAIEVAGPGFLNIRLKTAAKQQIVREVLAAGSAFGQQ 114 Query: 116 LIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQIN 175 G KV +EFVSANPTGP+HVGH R A +GD + +L A G V RE+Y NDAG QI Sbjct: 115 PAT-GEKVLVEFVSANPTGPLHVGHGRQAALGDAICNLRASQGDTVWREFYYNDAGVQIQ 173 Query: 176 TLALSVFWRYQQALYNNDSDLPEG----YYPGVYLKHVGKELADK-----YSSELLNFPE 226 TLA S R + D + P G Y G Y+ + ++ K E Sbjct: 174 TLAHSTQLRAR-GFKPGDPEWPSGEKAPAYNGDYIADIAEDFKAKKTVKSDDREYTASGN 232 Query: 227 EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYV 286 L +++++V + + DL+A ++ D + E + + + + L G Sbjct: 233 IDDLDSIREFAVAYLRREQDLDLQAFRVRFDNYYLESSLYT--SGRVEEAVRKLVAAGKT 290 Query: 287 YEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYE 346 YE L +ST GDD DR + K DG+YTYF D+AY K+E Sbjct: 291 YE----------------QDGALWLKSTDYGDDKDRVMKKQDGTYTYFVPDVAYHIAKWE 334 Query: 347 RGFDNMIYVMGSDHSGYVKRLEAVAAA--VSEKKAQINVLLCELVRLYRDGMPIKMSKRA 404 RGF ++ + G+DH G + R+ A A V + + +L +VR+ + G +K+SKRA Sbjct: 335 RGFHKVVNIQGTDHHGTIARVRAGLQAAGVGIPEGYPDYVLHTMVRVMKGGEEVKISKRA 394 Query: 405 GDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSI 464 G ++TLR +++ +D+VRF +L RK FD ++ +NPV+YVQYA+AR S+ Sbjct: 395 GSYVTLRDLIEWTSTDAVRFFLLSRKPDTEYTFDVDLAVAKNNDNPVYYVQYAHARICSV 454 Query: 465 FR-QAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAF 523 D D DL P ++ A+YP ++ A P+ + F Sbjct: 455 LAGWGGDATALKDVDLSPLESPAAQALMLLL--------AKYPAMLTAAAKDFAPHDVTF 506 Query: 524 YLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPN 583 YL +LA+ +H ++ R + ++ + + RL LV A A ++++GL I+GV +P+ Sbjct: 507 YLRELAASYHSYYDAER-------ILVDDEPVKLARLALVAATAQVLHNGLAILGVSAPS 559 Query: 584 EM 585 +M Sbjct: 560 KM 561 >gi|217969154|ref|YP_002354388.1| arginyl-tRNA synthetase [Thauera sp. MZ1T] gi|217506481|gb|ACK53492.1| arginyl-tRNA synthetase [Thauera sp. MZ1T] Length = 587 Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 206/622 (33%), Positives = 317/622 (50%), Gaps = 74/622 (11%) Query: 3 LFADFSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPL 62 + AD L + L+ + + I++ERP+ +HG +TN A+ L++PL +P Sbjct: 1 MSADPKVLLTDLLQTALKSVAPDLAATP-ILLERPKQASHGDFATNLALQLAKPLKRNPR 59 Query: 63 TIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTK 122 +A L++A + V +AG GFIN L+ ++ ++ G ++GR GKG K Sbjct: 60 ELAGLLLAELPPSKLVARAEVAGAGFINFTLASDAKTAVVREVLARGADFGR-GAGKGIK 118 Query: 123 VNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVF 182 V +EFVSANPTGP+HVGH R A G +L+ ++AF+GYEV+REYY+NDAG Q++ LALS + Sbjct: 119 VQVEFVSANPTGPLHVGHGRGAAYGASLSDVLAFAGYEVSREYYVNDAGRQMDILALSTW 178 Query: 183 WRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKY------------------------- 217 RY A + + P Y G Y+ +G+E+ D + Sbjct: 179 LRYL-AFFGIEIPFPPNAYQGDYVVDMGREMRDAHQDRFAKVTAMQILAGTPGLPPSDRK 237 Query: 218 SSELLNFPEE--------------KWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISED 263 E EE + P V +++ + R+DL+ ++ D + SE Sbjct: 238 DDEAKQQREEHLDALIANAKKLLGEDYPWVHGFALNEQLGDGREDLQEFGVRFDKWFSEQ 297 Query: 264 DFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRP 323 D + + L + GY+Y + FRST GD+ DR Sbjct: 298 SLF--DTGLVERAVTQLEKAGYIY----------------LQDGAKWFRSTAFGDEKDRV 339 Query: 324 LLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINV 383 + + +G +TYFA+D+AY KYERGFD MI + G+DH GY+ R++ AA+ A+++V Sbjct: 340 VQRENGLFTYFASDIAYHLNKYERGFDRMIDIWGADHHGYIPRVKGAIAALGLDPARLDV 399 Query: 384 LLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVK 443 L + LYRDG MS R+G+F+TLR + EVG+D+ RF + RK+ + LDFD K Sbjct: 400 ALVQFAVLYRDGQKTSMSTRSGEFVTLRELRREVGNDACRFFYVLRKSDQHLDFDLDLAK 459 Query: 444 EQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLA 503 QS ENPV+YVQYA+AR S+ Q +L + EL L LA Sbjct: 460 SQSNENPVYYVQYAHARVCSVLDQWGGEAAEL-------AGADLGLLQNERELALCARLA 512 Query: 504 EYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLV 563 + ++++A P+++AFYL DLA+ FH ++ R + + L + RL L Sbjct: 513 SFAELVQDAAAGYAPHQIAFYLKDLAADFHSWYNAER-------MLVEDEALKLARLALA 565 Query: 564 HAVASIINSGLNIIGVESPNEM 585 AV ++ +GL ++GV +P M Sbjct: 566 AAVRQVLVTGLKMLGVSAPESM 587 >gi|580993|emb|CAA38537.1| argS [Corynebacterium glutamicum] Length = 517 Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 180/552 (32%), Positives = 288/552 (52%), Gaps = 35/552 (6%) Query: 34 IERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYL 93 +ERPR+ HG +TN A+ +++ +G +P +A + + D +DS IAG GF+N+ L Sbjct: 1 MERPRNPEHGDYATNIALQVAKKVGQNPRDLATWLAEALAADDAIDSAEIAGPGFLNIRL 60 Query: 94 SPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASL 153 + + +I++ I+ G +G + VN+EFVSANPTGP+H+G R A VGD+L + Sbjct: 61 AAAAQGEIVAKILAQGETFGNSDHLSHLDVNLEFVSANPTGPIHLGGTRWAAVGDSLGRV 120 Query: 154 MAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKEL 213 + SG +VTREYY ND G QI+ ALS+ + PE Y G Y+K + + + Sbjct: 121 LEASGAKVTREYYFNDHGRQIDRFALSLLAAAK------GEPTPEDGYGGEYIKEIAEAI 174 Query: 214 ADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPI 273 +K+ E L + + V+ M + I+ L D++ E+ + + Sbjct: 175 VEKH-PEALALEPAATQELFRAEGVEMMFEHIKSSLHEFGTDFDVYYHENSLF--ESGAV 231 Query: 274 RDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTY 333 + L G +YE RST GDD DR ++KSDG Y Sbjct: 232 DKAVQVLKDNGNLYEN----------------EGAWWLRSTEFGDDKDRVVIKSDGDAAY 275 Query: 334 FAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLYR 393 A D+AY K+ RG + IY++G+DH GY+ RL+A AAA+ K + VL+ ++V L R Sbjct: 276 IAGDIAYVADKFSRGHNLNIYMLGADHHGYIARLKAAAAALGYKPEGVEVLIGQMVNLLR 335 Query: 394 DGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFY 453 DG ++MSKRAG +TL +V+ +G D+ R+ ++ LD D + QS +NPV+Y Sbjct: 336 DGKAVRMSKRAGTVVTLDDLVEAIGIDAARYSLIRSSVDSSLDIDLGLWESQSSDNPVYY 395 Query: 454 VQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENAT 513 VQY +AR SI R+A+ + + + +++ + E D LI L E+P V++ A Sbjct: 396 VQYGHARLCSIARKAETLG--VTEEGADLSLLTHDREGD-----LIRTLGEFPAVVKAAA 448 Query: 514 IAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSG 573 +EP+++A Y +LA FH + P+ V + + RL L A + + Sbjct: 449 DLREPHRIARYAEELAGTFHRFYDSCHILPK---VDEDTAPIHTARLALAAATRQTLANA 505 Query: 574 LNIIGVESPNEM 585 L+++GV +P +M Sbjct: 506 LHLVGVSAPEKM 517 >gi|146329599|ref|YP_001209938.1| arginyl-tRNA synthetase [Dichelobacter nodosus VCS1703A] gi|166232783|sp|A5EXU4|SYR_DICNV RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|146233069|gb|ABQ14047.1| arginyl-tRNA synthetase [Dichelobacter nodosus VCS1703A] Length = 592 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 187/617 (30%), Positives = 311/617 (50%), Gaps = 65/617 (10%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKILDR-IVIERPRDCAHGHLSTNAAMILSRPLGLDPLTI 64 + L + L + ++ ++LD+ I IER +D +G ++N A+ ++ + P + Sbjct: 4 EIQDGLGSALILVAKNHGIDIRLLDQAIEIERCKDPENGDFASNIALKYAKVFKMKPRQL 63 Query: 65 AELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVN 124 A+ +V + + V + +AG GFIN+ LS + +L ++V YG K+ Sbjct: 64 ADELVVSVPLMDSVAGMEVAGPGFINIRLSRESITAVLENVVAKKERYGCFENPNARKIL 123 Query: 125 IEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWR 184 +EFVSANPTGP+HVGH R A GD+L+ L+ +G++V REYYIND G Q++ LALSV+WR Sbjct: 124 VEFVSANPTGPLHVGHGRGAAYGDSLSRLLIANGHQVDREYYINDFGRQMDILALSVYWR 183 Query: 185 YQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELL--------------------NF 224 Y Q LP+G Y G Y+ + K+L +K L N Sbjct: 184 YVQEC-GIGVALPKGIYQGDYVIDIAKKLKEKEGKRLAYPVNEWAPDYPQTWTQEQVDNG 242 Query: 225 PEEKWLP----------------IVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRG 268 ++W+ V D ++ + IR DL+ + D + SE Sbjct: 243 DRDRWIDGAIAGLKEKLGQKEYRGVFDLALSMELDDIRGDLEEFGVFFDRWFSERSMSEN 302 Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328 D I + + + GY+YE + F+ST GD+ DR + + + Sbjct: 303 DM--INNALKKVDEAGYLYE----------------KDGAVWFKSTAFGDEKDRVVRRKN 344 Query: 329 GSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCEL 388 G TYF++D++Y KY RG+D MI ++G+DH GY+ R+ A AA+ ++ + L + Sbjct: 345 GMTTYFSSDISYHFDKYNRGYDQMIDILGADHHGYMARVRASLAALGLDPEKLVIALVQF 404 Query: 389 VRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKE 448 LY+ G ++MS R+G+F+TLR + + VG+D+ RF + RK + LDFD + SK+ Sbjct: 405 AVLYKGGEKMQMSTRSGEFVTLRDLREHVGADAARFFYVMRKPEQHLDFDLDLAESNSKD 464 Query: 449 NPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRV 508 NP +YV+YA+ARC + +A++ + + + + + + E LI L YP V Sbjct: 465 NPFYYVEYAHARCCGMLNKAEEEGYEFSPE---AALKCRNALVEPEETALISELHRYPEV 521 Query: 509 IENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVAS 568 + A P+++ YL +LA+ +H ++ G + V + ++ RL L AV Sbjct: 522 VIAAGKQMAPHQVIIYLKELATRWHHYYDVGHK------VLHEDEEIRNARLLLTWAVRQ 575 Query: 569 IINSGLNIIGVESPNEM 585 ++ + L IIGV++ M Sbjct: 576 VLRNALAIIGVQARERM 592 >gi|189183882|ref|YP_001937667.1| arginyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda] gi|238692015|sp|B3CST6|SYR_ORITI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|189180653|dbj|BAG40433.1| arginyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda] Length = 590 Score = 498 bits (1283), Expect = e-138, Method: Composition-based stats. Identities = 243/594 (40%), Positives = 360/594 (60%), Gaps = 13/594 (2%) Query: 1 MYLFADFSSRLKNYLKEIDCKIKV--EKKILDR------IVIERPRDCAHGHLSTNAAMI 52 M ++ + I K+K + K D IV+E +D +STN AM+ Sbjct: 1 MNIYKRLKQDIDVVATSIINKLKSTSDSKKFDSLNDTIPIVLESSKDVNSYDISTNIAML 60 Query: 53 LSRPLGLDPLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEY 112 +++ + + +T+A L ++ P + ++ IAG GFIN + L+ I+ Sbjct: 61 IAKKMNQNSITLANLFKKKLSHYPYIANITIAGPGFINFVILQEAWTNYLAIILDGSYRK 120 Query: 113 GRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGA 172 + IG KVNIE+VSANPTGP+H+GH R AV GD LA+L+ +GY+VTREYY+ND G Sbjct: 121 EYSSIGNNKKVNIEYVSANPTGPLHIGHARAAVYGDVLATLLQCTGYQVTREYYVNDTGV 180 Query: 173 QINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPI 232 QI+ L+ SV+ RY+QA+ +D+P+G YPG YL VG LA++Y +LL E ++L I Sbjct: 181 QIDNLSKSVYLRYKQAITGQAADIPKGLYPGEYLISVGTNLAEEYGDKLLTLSEPEYLNI 240 Query: 233 VKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILP 292 +KD +V +++ I+ DL + ++HD+F SE H D + I +ID L+ + VY G L Sbjct: 241 IKDVAVNNLLQSIKADLALIGVRHDVFFSEKKLH--DSNVISKVIDLLSVKKLVYTGKLS 298 Query: 293 PPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNM 352 PK +++ R QLLF+ST+ GDD DRPL K DGS++YFA+D+AY K +RGFD + Sbjct: 299 QPKGQSSDNW-QPRSQLLFKSTIFGDDQDRPLQKEDGSWSYFASDIAYADNKIKRGFDYV 357 Query: 353 IYVMGSDHSGYVKRLEAVAAAV-SEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLR 411 I+++G+DH GYV R++A+ A+ S + +++ +C+LV+L DG+ +KMSKR+G F T+R Sbjct: 358 IFILGADHIGYVSRIKAIIQALDSNQDVTLDIKICQLVKLIEDGVAVKMSKRSGSFTTIR 417 Query: 412 HVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDI 471 V + VG D +RF ML RKN+ +LDFD K++EQS++NPVFYVQYAY R SI R+AKD Sbjct: 418 DVYETVGKDVIRFFMLTRKNNAVLDFDLVKLQEQSRDNPVFYVQYAYVRAGSILRKAKD- 476 Query: 472 FPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASV 531 ++ +++F N EL LI LA + +++ A EP+++A YL LA+ Sbjct: 477 NANIAYEIFSTNKSDFSLLSTKEELNLIKILAVWSHMLDGAVKNFEPHRIAIYLQKLAAE 536 Query: 532 FHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 FH W+ + RF+ N+ LT RL L AV II GL IIG+ M Sbjct: 537 FHALWNLKSRDLDYRFIVLNDNNLTAARLALATAVREIIREGLKIIGITCVEVM 590 >gi|239917325|ref|YP_002956883.1| arginyl-tRNA synthetase [Micrococcus luteus NCTC 2665] gi|281414195|ref|ZP_06245937.1| arginyl-tRNA synthetase [Micrococcus luteus NCTC 2665] gi|259511651|sp|C5CA60|SYR_MICLC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|239838532|gb|ACS30329.1| arginyl-tRNA synthetase [Micrococcus luteus NCTC 2665] Length = 556 Score = 497 bits (1281), Expect = e-138, Method: Composition-based stats. Identities = 193/588 (32%), Positives = 307/588 (52%), Gaps = 44/588 (7%) Query: 6 DFSSRLKNYLKEIDCKIKVEKKI-----LDRIVIERPRDCAHGHLSTNAAMILSRPLGLD 60 D S+ L L + + + R+ +ERPR HG +TN A+ L + G+ Sbjct: 5 DLSALLSAVLTDAVDAGDLPAALREGITPARVKVERPRSREHGDWATNVALQLGKKAGMA 64 Query: 61 PLTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKG 120 P +A L+ R+ P + +V +AG GF+N+ L + + IV +G EYGRN G Sbjct: 65 PRDLAGLVAERLTGKPGIAAVDVAGPGFLNVTLDAASAGALAREIVEAGPEYGRNDTLAG 124 Query: 121 TKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALS 180 VN+EFVSANPTGP+H+GH R A +GD +A L+ SG +VT EYY+NDAG Q+N A S Sbjct: 125 HTVNMEFVSANPTGPLHIGHTRWAALGDAIARLLRASGADVTAEYYVNDAGNQMNVFADS 184 Query: 181 VFWRYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQA 240 V R D+P G YPG Y++ + +A ++ + +E P+V++ + + Sbjct: 185 VLARLH------GRDVPAGGYPGAYVQELADAVALEHPD-VRELTDEAARPVVREAAYRL 237 Query: 241 MMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQ 300 M+ I+D L A ++ D+F SE H D I + L QG++ Sbjct: 238 QMQDIKDTLAAFDVHFDVFTSEQTLH--DSGAIDQAVQRLREQGHI-------------- 281 Query: 301 KCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDH 360 + + ++T GDD DR L++++G TYFAAD AY+ K +RGF+ +Y++G+DH Sbjct: 282 --EDREGAVWLKTTDFGDDKDRVLIRANGEPTYFAADAAYYLHKRDRGFEEKVYLLGADH 339 Query: 361 SGYVKRLEAVAAAVSEKKA-QINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGS 419 GYV RL+A+AAA + A I +L+ +L+ + K+SKRAG+ I L+ +V+ +G Sbjct: 340 HGYVNRLKAIAAAAGDDPATNIEILIGQLISV----NGAKLSKRAGNIIELKDLVEWLGR 395 Query: 420 DSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDL 479 D++R+ + L D ++ + +NPV+YVQYA+AR R A+ D Sbjct: 396 DALRYDLARYPADSPLTIDPELLRSATNDNPVYYVQYAHARASGAARTAQAHGVD----- 450 Query: 480 FPRNVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHG 539 R+ +E +L+ LAE+P V+ A +EP+++ +L +A +H ++ Sbjct: 451 --RSEFDAALLTHATESELLAQLAEFPAVVAAAARLREPHRVTRHLEVIAGAYHSWYAAC 508 Query: 540 RENPRLRFVQANN--RKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 R P L RL L A A ++ +GL ++GV +P +M Sbjct: 509 RIVPMPTDDGTPRPVETLNRTRLWLNDATAQVLANGLGLLGVSAPEKM 556 >gi|296454953|ref|YP_003662097.1| arginyl-tRNA synthetase [Bifidobacterium longum subsp. longum JDM301] gi|296184386|gb|ADH01268.1| arginyl-tRNA synthetase [Bifidobacterium longum subsp. longum JDM301] Length = 684 Score = 497 bits (1281), Expect = e-138, Method: Composition-based stats. Identities = 174/639 (27%), Positives = 313/639 (48%), Gaps = 83/639 (12%) Query: 5 ADFSSRLKNYLKEIDCKIKVEKKIL---DRIVIERPRDCAHGHLSTNAAMILSRPLGLDP 61 ++ S + + L + +++ D++ + RP+D AHG ++N AM L++ G+ P Sbjct: 71 SELISSIAHNLVAAGQAGALTDELIPPVDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKP 130 Query: 62 LTIAELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGI----------- 110 +AE A + + V +AG GFIN+ L + ++ +++ +G Sbjct: 131 RDLAEPFAAALAEADGIAKVEVAGPGFINITLDSASAAAVVDTVLAAGAVTDTDKHLNKV 190 Query: 111 -EYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYIND 169 EYGRN G +N+EFVSANPTGP+H+G R A VGD +A ++ +G +V REYY ND Sbjct: 191 NEYGRNAHLGGQTLNLEFVSANPTGPIHIGGTRWAAVGDAMARVLEANGAKVVREYYFND 250 Query: 170 AGAQINTLALSVFWRYQQALYNNDS----DLPEGYYPGVYLKHVGKELADKYSSELLNF- 224 G QIN A S+ + +A ++ + P Y G Y+ + + + S+ ++ Sbjct: 251 HGEQINRFAKSLVAAWAEANNLGEAGYQTETPCDGYKGAYINEIAARVQAEAESDGVDLT 310 Query: 225 ------------------PEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFH 266 + + + +V M I+ +K + D++ E+ + Sbjct: 311 ALAHQDQGLNDDGEPLGEADTEVREEFRKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLY 370 Query: 267 RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLK 326 + I+ L +G +++ F ST GDD DR ++K Sbjct: 371 A--DGKVDAAIEELKSRGDIFD----------------KDGATWFESTKHGDDKDRVIIK 412 Query: 327 SDGSYTYFAADLAYFKCKYERG---FDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQ-IN 382 S+G + YFAAD+AY+ K R D IY++G+DH GY+ R+ A+ AA ++ + + Sbjct: 413 SNGEFAYFAADIAYYWDKRHRAENPADVAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQ 472 Query: 383 VLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKV 442 +L+ +LV + +DG P++MSKRAG+ +T+ +V VG D+ R+ + ++ D D + Sbjct: 473 ILIGQLVNVMKDGKPVRMSKRAGNVVTIDDLVSVVGVDAARYSLARSDYNQNFDIDLALL 532 Query: 443 KEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHL 502 + +NPV+YVQYA+AR +++ R A + ++ ++ E++ +++ L Sbjct: 533 ASHTNDNPVYYVQYAHARSKNVDRNAAVAG--ISYEGADLALLDTEADG-----EVLAAL 585 Query: 503 AEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENP----------------RLR 546 A++P V+ A ++P+K+A YL +LA+ +H ++ R P L Sbjct: 586 AQFPSVLATAADDRQPHKVARYLEELAATYHKWYNVERVVPMALTDPETRGDDEARKALE 645 Query: 547 FVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + RL+L AV +I +GL+++GV +P +M Sbjct: 646 IAKNPEPARAAARLKLNDAVQQVIANGLDLLGVTAPEKM 684 >gi|160871916|ref|ZP_02062048.1| arginyl-tRNA synthetase [Rickettsiella grylli] gi|159120715|gb|EDP46053.1| arginyl-tRNA synthetase [Rickettsiella grylli] Length = 587 Score = 497 bits (1281), Expect = e-138, Method: Composition-based stats. Identities = 202/615 (32%), Positives = 297/615 (48%), Gaps = 68/615 (11%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 +K L I + I I I+ R HG S+N A++L++ L + PL +AE Sbjct: 5 LKQEIKKALLSIGDSFTLSSSI---IQIDYARGKLHGDFSSNIALVLAKQLNVQPLQLAE 61 Query: 67 LIVARIK---IDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKV 123 I A I + ++ + +AG GFIN +L ++S I+ ++G + +G+ V Sbjct: 62 KIKANIDCCSENSKIEKIEVAGPGFINFFLKKWVWHDVISQILTQTNQFGTSNLGRQESV 121 Query: 124 NIEFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFW 183 IEFVSANPTGP+HVGH R A GD++ L++ GY+V EYYINDAG Q++ LA SV+ Sbjct: 122 LIEFVSANPTGPLHVGHGRGAAYGDSITRLLSAVGYQVCSEYYINDAGRQMDILATSVWL 181 Query: 184 RYQQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPE----------------- 226 RY + + N + P Y G Y++ + ++L +Y E Sbjct: 182 RYLE-ICNETFNFPSNAYRGNYVQKIAQQLYTQYGERFFQPSELVFKDIPVDEPQGGNKE 240 Query: 227 ---------------EKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPS 271 V D + +++ I++DL A + D + SE + Sbjct: 241 HHIDSLILQAKTLLGPNGYEKVFDAGLNSILIDIKEDLTAFRVNFDEWFSEKSLFKM--G 298 Query: 272 PIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSY 331 + I L G YE L F+ST GDD DR LL+ +G Sbjct: 299 FVNKAIKRLKELGKTYEA----------------NGALWFKSTDFGDDKDRVLLRENGQP 342 Query: 332 TYFAADLAYFKCKYE-RGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVR 390 TYFAAD Y E R F +I V+G+DH GY+ R+ AV A K LL + Sbjct: 343 TYFAADAGYRLYILEKRKFKKIINVLGADHHGYIPRIHAVIQAFGFPKESFKALLVQFAI 402 Query: 391 LYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENP 450 LYR I+MS R+G+FITLR + +EVG+D+ RF + R+ + +DFD KEQS NP Sbjct: 403 LYRGDKKIQMSTRSGEFITLRDLREEVGADATRFFYVLRRVDQHMDFDLELAKEQSNANP 462 Query: 451 VFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIE 510 V+YVQY YAR S+ RQ + L ++ +T E L+V L Y V+E Sbjct: 463 VYYVQYVYARINSVMRQLAAKQWVWNKILGMDSL---SELKETQEQNLLVLLNRYSEVVE 519 Query: 511 NATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASII 570 A + EP+ LA +L DLA FH +++ N L RL L+ A+A +I Sbjct: 520 LAAVTYEPHILAHFLKDLAQSFHVYYNSF-------IFLVENDNLRNARLNLIAAIAQVI 572 Query: 571 NSGLNIIGVESPNEM 585 +GL+++GV++ M Sbjct: 573 KNGLDLLGVKTLEVM 587 >gi|194337845|ref|YP_002019639.1| arginyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1] gi|229470726|sp|B4SH34|SYR_PELPB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|194310322|gb|ACF45022.1| arginyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1] Length = 552 Score = 497 bits (1279), Expect = e-138, Method: Composition-based stats. Identities = 180/584 (30%), Positives = 291/584 (49%), Gaps = 37/584 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAE 66 + + + +I+IE+P D G STN A++ ++ +P +A+ Sbjct: 1 MKEFFRPVISNALHSAGITTD--KQIIIEQPADKKFGDFSTNIALLAAKECRRNPRELAQ 58 Query: 67 LIVARIKIDPD-VDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 I+ + PD + + +AG GFIN YL+P ++ + + +++ G EYG+ GKG K + Sbjct: 59 TIIEHLSFPPDTIAKIEVAGAGFINFYLTPLFIMQSVEQVLLDGDEYGKGESGKGEKAIV 118 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 E+VSANPTGP+ +G R V+GD +A+L A GY VTREYY NDAG Q+ L SV +RY Sbjct: 119 EYVSANPTGPLTIGRGRGGVLGDCIANLFATQGYAVTREYYFNDAGRQMQILGESVRFRY 178 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245 + + P +Y G Y+ + +EL + + + L + + + I K + + + I Sbjct: 179 LERC-GETIEFPATHYQGEYIGEIAEELFNDHGTALADSTD---VQIFKKRAEEIIFASI 234 Query: 246 RDDLKALNIQHDIFISEDDFHRGDPSPI---RDIIDNLARQGYVYEGILPPPKSKTTQKC 302 R L+ L I+HD F +E + D + + +ID L + ++ E Sbjct: 235 RKTLERLGIRHDSFFNEHTLYTPDAGGVTGNQRVIDALREKEFIAEY------------- 281 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 F +T +G + D+ L+KS G +Y D+AY KYERGF ++ V G+DH Sbjct: 282 ---DGATWFLTTKLGQEKDKVLIKSSGEPSYRLPDIAYHITKYERGFGMIVNVFGADHID 338 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 + + I + + + V DG +KMS R G+ L ++D+VG+D+ Sbjct: 339 EYPDVLEALKILGYDTRHIKIAINQFVTTTVDGQTLKMSTRKGNADLLDDLIDDVGADAT 398 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 R + R L+FD K+QSK+NPVFY+QYA+AR S+ R A+ ++ FD Sbjct: 399 RLFFIMRSKDSHLNFDVELAKKQSKDNPVFYLQYAHARICSLLRMAQ---QEIGFDATSS 455 Query: 483 -NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRE 541 + + +ELQL L +YP +I+ + EP K+ YL+ LA FH + +E Sbjct: 456 PELHLLQRLTSPAELQLGSALLDYPDMIKTSLRLLEPQKMVEYLHSLAECFHRFY---QE 512 Query: 542 NPRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P L+ + RL L A ++ +G I+GV +P M Sbjct: 513 CPILK----AEPDIARARLFLSVATRQVLRNGFRILGVSAPESM 552 >gi|21672856|ref|NP_660921.1| arginyl-tRNA synthetase [Chlorobium tepidum TLS] gi|34222754|sp|Q8KGF3|SYR_CHLTE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|21645905|gb|AAM71263.1| arginyl-tRNA synthetase [Chlorobium tepidum TLS] Length = 551 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 177/575 (30%), Positives = 288/575 (50%), Gaps = 36/575 (6%) Query: 15 LKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIVARIKI 74 +++ K +E I I++P D G STN A ++++ +P +A ++ + Sbjct: 9 IQDALQKAGIETD--KEIQIDKPNDKKFGDFSTNIAFLVAKEARKNPRELAGQLIGLLDF 66 Query: 75 -DPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPT 133 + V +AG GFIN +L+P++ + ++ G +G N GKG K +E+VSANPT Sbjct: 67 PEGTVTKTEVAGPGFINFHLAPAFFMRSAQEVLAKGEGFGCNESGKGLKAIVEYVSANPT 126 Query: 134 GPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNND 193 GP+ +G R V+GD +A+L+ GYEVTREYY NDAG Q+ LA SV +RY + Sbjct: 127 GPLTIGRGRGGVLGDCIANLLETQGYEVTREYYFNDAGRQMQILAESVRYRYLEKC-GQV 185 Query: 194 SDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALN 253 + PE +Y G Y+ + + L ++ L E L I K+ + + IR L+ L Sbjct: 186 IEFPETHYQGDYIGEIAETLFIEHGDGLAATDE---LTIFKEAAEAVIFSSIRKTLERLL 242 Query: 254 IQHDIFISEDDFH---RGDPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLL 310 I HD F +E + G PS + +ID L +G++ Sbjct: 243 ITHDSFFNEHTLYQSREGQPSANQRVIDALDAKGFI----------------GNYDGATW 286 Query: 311 FRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAV 370 F +T +G + D+ L+KS G +Y D+AY K+ERGFD M+ V G+DH + Sbjct: 287 FMTTKLGQEKDKVLIKSSGDPSYRLPDIAYHVTKFERGFDLMVNVFGADHIDEYPDVLEA 346 Query: 371 AAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRK 430 + +++ + + + V G +KMS R G+ L ++D+VG+D+ R + R Sbjct: 347 LKILGYDTSKVKIAINQFVTTTVGGQTVKMSTRKGNADLLDDLIDDVGADATRLFFIMRG 406 Query: 431 NSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESE 490 L+FD K+QSK+NPVFY+QYA+AR S+ R A+ ++ FD Sbjct: 407 KDSHLNFDVELAKKQSKDNPVFYLQYAHARICSLVRMAE---KEVGFDEATAIGAGLPLL 463 Query: 491 FDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQA 550 E+ L L ++P +I+++ EP K+ YL+ +A +H + +E P L+ Sbjct: 464 SSEPEIDLASALLDFPDIIQSSLRQLEPQKMVEYLHTVAERYHKFY---QECPILK---- 516 Query: 551 NNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 + L RL+L AV ++ +G I+G+ +P M Sbjct: 517 ADEHLRTARLELSLAVRQVLRNGFKILGISAPESM 551 >gi|189347953|ref|YP_001944482.1| arginyl-tRNA synthetase [Chlorobium limicola DSM 245] gi|229558752|sp|B3EIJ1|SYR_CHLL2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA ligase; Short=ArgRS gi|189342100|gb|ACD91503.1| arginyl-tRNA synthetase [Chlorobium limicola DSM 245] Length = 551 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 183/583 (31%), Positives = 290/583 (49%), Gaps = 36/583 (6%) Query: 7 FSSRLKNYLKEIDCKIKVEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIA- 65 L +K +E + IE+P D +G STN A++LS+ +P +A Sbjct: 1 MQEFLLPVIKSALQSAAIETDKP--VQIEKPTDKKNGDFSTNIALLLSKECRRNPRELAA 58 Query: 66 ELIVARIKIDPDVDSVFIAGKGFINLYLSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNI 125 ELI I D V+ + IAG GFIN YL+P ++ + + I++ G YG + GKG + Sbjct: 59 ELIGQMIFPDGTVERIEIAGPGFINFYLTPLFIMQSVEHILLEGKGYGSSCAGKGKTAIV 118 Query: 126 EFVSANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRY 185 E+VSANPTGP+ +G R V+GD +A+L+A GY +TREYY NDAG Q+ L SV +RY Sbjct: 119 EYVSANPTGPLTIGRGRGGVLGDCIANLLATQGYGLTREYYFNDAGRQMQILGESVRYRY 178 Query: 186 QQALYNNDSDLPEGYYPGVYLKHVGKELADKYSSELLNFPEEKWLPIVKDYSVQAMMKII 245 + D PE +Y G Y++ + + L ++ S L++ L I KD + + I Sbjct: 179 MERC-GRDIVFPESHYQGEYIREIAEILFLEHESSLIDSD---NLSIFKDTAEAIIFSSI 234 Query: 246 RDDLKALNIQHDIFISEDDFHRGD---PSPIRDIIDNLARQGYVYEGILPPPKSKTTQKC 302 + L ++I+HD F +E + + S +++ L +G++ Sbjct: 235 KKTLARIDIRHDSFFNEHTLYIAEGNGKSANDRVLELLESKGFI---------------- 278 Query: 303 DMDRKQLLFRSTMVGDDVDRPLLKSDGSYTYFAADLAYFKCKYERGFDNMIYVMGSDHSG 362 D F +T +G + D+ L+KS G +Y D+AY KY R FD ++ V G+DH Sbjct: 279 DRYDGATWFLTTKLGQEKDKVLVKSSGEPSYRLPDIAYHLDKYRRKFDLIVNVFGADHID 338 Query: 363 YVKRLEAVAAAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSV 422 + + +++ V + + V DG +KMS R G+ L ++D+VG+D+ Sbjct: 339 EYPDVLEALRILGHDTSKMRVAINQFVTTTVDGETVKMSTRKGNADLLDELIDDVGADAT 398 Query: 423 RFMMLWRKNSELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPR 482 R + R L+FD K+QSK+NPVFY+QYA+AR S+ R A + + F Sbjct: 399 RLFFIMRSKDSHLNFDIELAKKQSKDNPVFYLQYAHARICSLLRIAAE---EAGFKPDGS 455 Query: 483 NVIPQESEFDTSELQLIVHLAEYPRVIENATIAQEPYKLAFYLYDLASVFHGHWSHGREN 542 + E+QL L +YP VI A EP K+ YL+ +A +H + +E Sbjct: 456 GAHLLQKLTLEPEIQLGFTLLDYPEVIRTAIRLLEPQKMVEYLHSVAEQYHKFY---QEC 512 Query: 543 PRLRFVQANNRKLTMMRLQLVHAVASIINSGLNIIGVESPNEM 585 P L+ + + RL L A ++ +G I+G+ +P M Sbjct: 513 PILK----ADPDIRTARLFLSLATRQVLRNGFTILGISAPESM 551 >gi|254455816|ref|ZP_05069245.1| arginyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211] gi|207082818|gb|EDZ60244.1| arginyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211] Length = 576 Score = 496 bits