RPSBLAST alignment of GI: 254780285 and protein with PDBid: 1f7u

>1f7u_A Arginyl-tRNA synthetase; RNA-protein complex, aminoacylation, ligase, ligase/RNA complex; HET: PSU 1MG 2MG H2U M2G 5MC 5MU 1MA ARG; 2.20A {Saccharomyces cerevisiae} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 PDB: 1bs2_A* 1f7v_A* Length = 607

 Score =  370 bits (952), Expect = e-103
 Identities = 127/611 (20%), Positives = 226/611 (36%), Gaps = 74/611 (12%)

Query: 11  LKNYLKEIDCKIK-VEKKILDRIVIERPRDCAHGHLSTNAAMILSRPLGLDPLTIAELIV 69
           ++NY+ +   KI  V+  ++    +E       G L      +     G +P  +A    
Sbjct: 35  MRNYISQELSKISGVDSSLIFPA-LEWTNTMERGDLLIPIPRLRI--KGANPKDLAVQWA 91

Query: 70  ARIKIDPDVDSVFIAGKGFINLYLSPSYLRK-ILSSIVVSGIEYGRNLIGKGTKVNIEFV 128
            +      ++ V   G  FI  + +P +L K ++  I+    +YG   + +  KV IEF 
Sbjct: 92  EKFPCGDFLEKVEANG-PFIQFFFNPQFLAKLVIPDILTRKEDYGSCKLVENKKVIIEFS 150

Query: 129 SANPTGPMHVGHCRCAVVGDTLASLMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQA 188
           S N   P H GH R  ++G  LA+L    G+EV R  Y+ D G Q   LA+       + 
Sbjct: 151 SPNIAKPFHAGHLRSTIIGGFLANLYEKLGWEVIRMNYLGDWGKQFGLLAVGFERYGNEE 210

Query: 189 LYNNDSD---------LPEGYYPGVYLKHVGKELADKYSSELLNF--PEEKWLPIVKDYS 237
               D           + +          + +    K           +E+ L I K + 
Sbjct: 211 ALVKDPIHHLFDVYVRINKDIEEEGDSIPLEQSTNGKAREYFKRMEDGDEEALKIWKRF- 269

Query: 238 VQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSPIRDIIDNLARQGYVYEGILPPPKSK 297
            +  ++   D    LNI++D++  E    +     +   ID    +G  +E         
Sbjct: 270 REFSIEKYIDTYARLNIKYDVYSGESQVSKES---MLKAIDLFKEKGLTHE--------- 317

Query: 298 TTQKCDMDRKQLLFRSTMVGDDVDRPLL-KSDGSYTYFAADLAYFKCKYER-GFDNMIYV 355
                  D+  +L   T     + + ++ KSDG+  Y   D+     +YE+  FD MIYV
Sbjct: 318 -------DKGAVLIDLTKFNKKLGKAIVQKSDGTTLYLTRDVGAAMDRYEKYHFDKMIYV 370

Query: 356 MGSDHSGYVKRLEAVAAAVSEKKAQI------------------NVLLCELVRLYRDGMP 397
           + S    +  +   +   +  + A+                    V L  ++   ++ M 
Sbjct: 371 IASQQDLHAAQFFEILKQMGFEWAKDLQHVNFGMVQGMSTRKGTVVFLDNILEETKEKMH 430

Query: 398 IKMSKRAGDFITLRH---VVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVFYV 454
             M K    +  + H   V D VG  +V    +  K     +F + ++     +    Y+
Sbjct: 431 EVMKKNENKYAQIEHPEEVADLVGISAVMIQDMQGKRINNYEFKWERMLSFEGDTG-PYL 489

Query: 455 QYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENATI 514
           QYA++R RS+ R A  I  +   +             + +   LI  L +YP V+ NA  
Sbjct: 490 QYAHSRLRSVERNASGITQEKWIN------ADFSLLKEPAAKLLIRLLGQYPDVLRNAIK 543

Query: 515 AQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINSGL 574
             EP  +  YL+ L       +           V     +L   RL L  A   ++ +G+
Sbjct: 544 THEPTTVVTYLFKLTHQVSSCYDVLW-------VAGQTEELATARLALYGAARQVLYNGM 596

Query: 575 NIIGVESPNEM 585
            ++G+     M
Sbjct: 597 RLLGLTPVERM 607