RPSBLAST alignment of GI: 254780285 and protein with PDBid: 3fnr

>3fnr_A Arginyl-tRNA synthetase; transferase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 2.20A {Campylobacter jejuni} Length = 464

 Score =  387 bits (996), Expect = e-108
 Identities = 148/494 (29%), Positives = 257/494 (52%), Gaps = 41/494 (8%)

Query: 93  LSPSYLRKILSSIVVSGIEYGRNLIGKGTKVNIEFVSANPTGPMHVGHCRCAVVGDTLAS 152
           LS ++L ++ +  + +  ++ +    K     +E+VSANPTGP+H+GH R AV GDTL  
Sbjct: 3   LSKTFLNELANQALTNPNDFTKGE-KKQESFLLEYVSANPTGPLHIGHARGAVFGDTLTR 61

Query: 153 LMAFSGYEVTREYYINDAGAQINTLALSVFWRYQQALYNNDSDLPEGYYPGVYLKHVGKE 212
           L    GY+   EYY+NDAG QI  L LS+    ++++ + + + PE YY G Y+  + KE
Sbjct: 62  LARHLGYKFNTEYYVNDAGNQIYLLGLSILLSVKESILHENVEYPEQYYKGEYIVDLAKE 121

Query: 213 LADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDLKALNIQHDIFISEDDFHRGDPSP 272
             +K+  E   F  E+ +P + D++   M+ +I+ +L+   I+ D ++SE  ++      
Sbjct: 122 AFEKFGKE---FFSEENIPSLADWAKDKMLVLIKQNLEQAKIKIDSYVSERSYYD----A 174

Query: 273 IRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSDGSYT 332
           +   +++L     +YE                   ++   S+  GD+ DR +++ DG  T
Sbjct: 175 LNATLESLKEHKGIYE----------------QEGKIWLASSQKGDEKDRVIIREDGRGT 218

Query: 333 YFAADLAYFKCKYERGFDNMIYVMGSDHSGYVKRLEAVAAAVSEKKAQINVLLCELVRLY 392
           Y AAD+ Y K K  RG+   I + G+DH GY+ R++A    +      + ++L ++V L 
Sbjct: 219 YLAADIVYHKDKMSRGYGKCINIWGADHHGYIPRMKAAMEFLGFDSNNLEIILAQMVSLL 278

Query: 393 RDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKNSELLDFDFCKVKEQSKENPVF 452
           +DG P KMSKRAG+FI +  VVDE+GSD++R++ L +K    L+FD   ++++   NPV+
Sbjct: 279 KDGEPYKMSKRAGNFILMSDVVDEIGSDALRYIFLSKKCDTHLEFDISDLQKEDSSNPVY 338

Query: 453 YVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEFDTSELQLIVHLAEYPRVIENA 512
           Y+ YA+AR   +F +A     D+                +   + L+        V+ +A
Sbjct: 339 YINYAHARIHQVFAKAGKKIDDVMKADL--------QSLNQDGVNLLFEALNLKAVLNDA 390

Query: 513 TIAQEPYKLAFYLYDLASVFHGHWSHGRENPRLRFVQANNRKLTMMRLQLVHAVASIINS 572
             A+   K+  YL +LA+ FH  ++        + V + N       L+L   VA  I +
Sbjct: 391 FEARALQKIPDYLKNLAANFHKFYNEN------KVVGSANEND---LLKLFSLVALSIKT 441

Query: 573 GLNIIGVESPNEMS 586
             +++G+E+ N+M 
Sbjct: 442 AFSLMGIEAKNKME 455