RPSBLAST alignment of GI: 254780285 and protein with PDBid: 3h99
>3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, metal-binding, nucleotide-binding; HET: CIT; 1.40A {Escherichia coli k-12} PDB: 3h97_A* 3h9b_A* 1f4l_A 3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A* 1pg2_A* 1qqt_A 1mea_A 1med_A Length = 560
Score = 40.6 bits (94), Expect = 0.001
Identities = 59/434 (13%), Positives = 116/434 (26%), Gaps = 73/434 (16%)
Query: 131 NPTGPMHVGHCRCAVVGDTLASLMAFSGYEV----------------------TREYYIN 168
G +H+GH + D G+EV T E I
Sbjct: 28 YANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGITPEQMIG 87
Query: 169 DAGAQINTL--ALSVFW------------RYQQALYN---NDSDLPEGYYPGVYLKHVGK 211
+ + T ++ + + + +Y+ + + +Y G
Sbjct: 88 EMSQEHQTDFAGFNISYDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGM 147
Query: 212 ELADKYSSELLNFPEEKWLPIVKDYSVQAMMKIIRDDL---KALNIQHDIFISEDDFHRG 268
L D++ P+ K D +L K++ + + +
Sbjct: 148 FLPDRFVKG--TCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFF 205
Query: 269 DPSPIRDIIDNLARQGYVYEGILPPPKSKTTQKCDMDRKQLLFRSTMVGDDVDRPLLKSD 328
D +++ R G + +K + + +Q + P
Sbjct: 206 DLPSFSEMLQAWTRSGALQ----EQVANKMQEWFESGLQQWDISRDAPYFGFEIPNAPGK 261
Query: 329 GSYTYFAADLAYFKCKYERGFDN-----------------MIYVMGSDHSGYVKRLEAVA 371
Y + A + + + +G D ++
Sbjct: 262 YFYVWLDAPIGLMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFLSLFWPAM 321
Query: 372 AAVSEKKAQINVLLCELVRLYRDGMPIKMSKRAGDFITLRHVVDEVGSDSVRFMMLWRKN 431
S + N+ + V +G MSK G FI ++ +DS+R+ + +
Sbjct: 322 LEGSNFRKPSNLFVHGYV--TVNGAK--MSKSRGTFIKASTWLNHFDADSLRYYYTAKLS 377
Query: 432 SELLDFDFCKVKEQSKENPVFYVQYAYARCRSIFRQAKDIFPDLDFDLFPRNVIPQESEF 491
S + D D + N R A I D L PQ +
Sbjct: 378 SRIDDIDLNLEDFVQRVNADI----VNKVVNLASRNAGFINKRFDGVLASELADPQLYKT 433
Query: 492 DTSELQLIVHLAEY 505
T ++I E
Sbjct: 434 FTDAAEVIGEAWES 447