HHsearch alignment for GI: 254780286 and conserved domain: COG1078

Probab=99.18  E-value=2e-11  Score=104.23  Aligned_cols=95  Identities=35%  Similarity=0.466  Sum_probs=74.1

Q ss_pred             CEEECCHHHHHHCCCCEEEE--CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHH---------HHHHHHHHHHCCCCCC
Q ss_conf             01102734623275747871--699987066208889999999999988399988---------9999998886289988
Q gi|254780286|r   45 DRMIHTTAFRRLKDKTQVFF--HRQRDHYRTRLMHTIEVSQIARSLARALRIDED---------LVEAIALAHDFGHPPF  113 (410)
Q Consensus        45 dRIi~S~afRRL~~KTQVf~--~~~~d~~rtRLtHslEVa~i~rsi~~~l~~~~d---------lvea~~L~HDiGhpPF  113 (410)
T Consensus        21 ~~LIdT~~FQRLRrIkQLG~a~lvyPgAnHTRFeHSLGV~~la~~~~~~l~~~~~~~~~~~~~~~~~~AALLHDIGHgPF  100 (421)
T COG1078          21 LELIDTPEFQRLRRIKQLGLAYLVYPGANHTRFEHSLGVYHLARRLLEHLEKNSEEEIDEEERLLVRLAALLHDIGHGPF  100 (421)
T ss_pred             HHHHCCHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC
T ss_conf             98748797878877553161268638986045205268999999999987512320002578899999999872698865


Q ss_pred             CCCHHHHHHHHHHHCCCCCCCCCHHHHHHH
Q ss_conf             654789999997312554577657788754
Q gi|254780286|r  114 GHVGEDVLQELLSSYGGFDHNIQSFRIVTE  143 (410)
Q Consensus       114 GH~GE~al~~~~~~~~gFegNaQ~~Rilt~  143 (410)
T Consensus       101 SH~fE~~~~~~----~~~~He~~~~~ii~~  126 (421)
T COG1078         101 SHTFEYVLDKN----LGFYHEDVTQRIIKN  126 (421)
T ss_pred             CCCHHHHHCCC----CCCCHHHHHHHHHCC
T ss_conf             35357886324----532288999988517