HHsearch alignment for GI: 254780286 and conserved domain: smart00471
>smart00471 HDc Metal dependent phosphohydrolases with conserved 'HD' motif. Includes eukaryotic cyclic nucleotide phosphodiesterases (PDEc). This profile/HMM does not detect HD homologues in bacterial glycine aminoacyl-tRNA synthetases (beta subunit).
Probab=98.52 E-value=6.6e-07 Score=70.76 Aligned_cols=117 Identities=23% Similarity=0.173 Sum_probs=77.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf 066208889999999999988399-9889999998886289988654789999997312554577657788754321146
Q gi|254780286|r 71 YRTRLMHTIEVSQIARSLARALRI-DEDLVEAIALAHDFGHPPFGHVGEDVLQELLSSYGGFDHNIQSFRIVTELECSYA 149 (410)
Q Consensus 71 ~rtRLtHslEVa~i~rsi~~~l~~-~~dlvea~~L~HDiGhpPFGH~GE~al~~~~~~~~gFegNaQ~~Rilt~LE~~~~ 149 (410)
T Consensus 2 ~~~~~~Hs~~Va~la~~la~~~~~~~~~~l~~aaLlHDiGk~~~~~~~~~~~~~------~~~h~~~~~~~~~~~~--~~ 73 (124)
T smart00471 2 DYHVFEHSLRVAQLAAALAEELGLLDIELLLLAALLHDIGKPGTPDSFLVKTSV------LEDHHFIGAEILLEEE--EP 73 (124)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCHHH------HHHHHHHHHHHHHCCC--CC
T ss_conf 704999999999999999999298849999999999875244699999836098------8786999999998187--54
Q ss_pred CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 701000247888776347577886444552100145776676402231336673217986565544321207
Q gi|254780286|r 150 DFDGINLTWETLEGLIGHNGPILPQDLDKPRIIPRIFSDYYHIHGLSLANFASLEGQVAAIADDIAYDAHDI 221 (410)
Q Consensus 150 ~~~GLNLT~atL~~iiKyp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~slEa~iveaADDIAY~~hDl 221 (410)
T Consensus 74 ~----~~~~~~~~~i~~Hh~~~~----------------------g~~~~~i~~~~~i~~~aD~~da~~~~~ 119 (124)
T smart00471 74 R----ILEEILATAILSHHERPD----------------------GLRGEPITLEARIVKVADRLDALRRDR 119 (124)
T ss_pred H----HHHHHHHHHHHHCCCCCC----------------------CCCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 7----899999999996379889----------------------998787587878876403977760799