HHsearch alignment of GI: 254780286 and MMDB domain: 2pjq_A_
>2pjq_A (A:) Uncharacterized protein LP_2664; LPR71, NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Lactobacillus plantarum WCFS1}
Probab=99.84 E-value=1.2e-21 Score=179.21 Aligned_cols=187 Identities=15% Similarity=0.074 Sum_probs=127.9
Q ss_pred CCCEEECCHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf 00011027346232757478716999870662088899999999999883999889999998886289988654789999
Q gi|254780286|r 43 DRDRMIHTTAFRRLKDKTQVFFHRQRDHYRTRLMHTIEVSQIARSLARALRIDEDLVEAIALAHDFGHPPFGHVGEDVLQ 122 (410)
Q Consensus 43 D~dRIi~S~afRRL~~KTQVf~~~~~d~~rtRLtHslEVa~i~rsi~~~l~~~~dlvea~~L~HDiGhpPFGH~GE~al~ 122 (410)
-|||||+|+.|+||+.+||||+ .+++.+||+|||++|+++|+.||+.+++|++++++|||.||||+|||||.||..+.
T Consensus 2 ~r~r~i~~~~~~~l~~~~~~~~--~~~~~~~r~~Hsl~V~~~a~~ia~~~~~d~~~~~~AaLlHDIGk~~~~~~~e~~~~ 79 (231)
T 2pjq_A 2 AGDPXITETQLTAIQTYALQKL--AHDHSGHGRDHLQRVNRLARRLAKDEGANLNLTLAAAWLHDVIDDKLXANPAKAHQ 79 (231)
T ss_dssp ----CCCHHHHHHHHHHHHTSS--TTCCSSCSHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHC---------CHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHH--CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHH
T ss_conf 9870404999999999999984--56977678799999999999999884999999999999975212113588677899
Q ss_pred HHHHHCCCCCCCCCHHHHH-HHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
Q ss_conf 9973125545776577887-543211467010002478887763475778864445521001457766764022313366
Q gi|254780286|r 123 ELLSSYGGFDHNIQSFRIV-TELECSYADFDGINLTWETLEGLIGHNGPILPQDLDKPRIIPRIFSDYYHIHGLSLANFA 201 (410)
Q Consensus 123 ~~~~~~~gFegNaQ~~Ril-t~LE~~~~~~~GLNLT~atL~~iiKyp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (410)
.|.+...++..+.+-...+ .-+........+.|++..++.+.+++...... ........................
T Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~I~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 155 (231)
T 2pjq_A 80 DLIVQLNAQNVTADDQTAIFAIIDHXSFSKSFNGPQKLSLEGQVVQDADRLD----AIGAIGIARALYYSGHVGEKIYDP 155 (231)
T ss_dssp HHHHHHHTTTCCHHHHHHHHHHHTSCCTGGGGGCCCCCCSHHHHHHHHHHHT----TSHHHHHHHHHHHHHHHTCCSCCT
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH----HCCHHHHHHHHHHHHHCCCCCCCC
T ss_conf 9999987199898999999999994898823678987689999999888987----432177999999988608866686
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
Q ss_conf 7321798656554432120798998753067763
Q gi|254780286|r 202 SLEGQVAAIADDIAYDAHDIDDGVRAGLLTVDML 235 (410)
Q Consensus 202 slEa~iveaADDIAY~~hDlEDai~~gli~~~~l 235 (410)
+.+...+..++++++...+..+....+++...+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (231)
T 2pjq_A 156 AIAPREHXTREQYRHQPGTAINHFYEKLFKLAAL 189 (231)
T ss_dssp TSCCCSSCCHHHHHHSCCCTTHHHHHTGGGHHHH
T ss_pred CCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf 5566654347776318851889999999977876