HHsearch alignment of GI: 254780286 and MMDB domain: 2pjq_A_

>2pjq_A (A:) Uncharacterized protein LP_2664; LPR71, NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Lactobacillus plantarum WCFS1}
Probab=99.84  E-value=1.2e-21  Score=179.21  Aligned_cols=187  Identities=15%  Similarity=0.074  Sum_probs=127.9

Q ss_pred             CCCEEECCHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHH
Q ss_conf             00011027346232757478716999870662088899999999999883999889999998886289988654789999
Q gi|254780286|r   43 DRDRMIHTTAFRRLKDKTQVFFHRQRDHYRTRLMHTIEVSQIARSLARALRIDEDLVEAIALAHDFGHPPFGHVGEDVLQ  122 (410)
Q Consensus        43 D~dRIi~S~afRRL~~KTQVf~~~~~d~~rtRLtHslEVa~i~rsi~~~l~~~~dlvea~~L~HDiGhpPFGH~GE~al~  122 (410)
                      -|||||+|+.|+||+.+||||+  .+++.+||+|||++|+++|+.||+.+++|++++++|||.||||+|||||.||..+.
T Consensus         2 ~r~r~i~~~~~~~l~~~~~~~~--~~~~~~~r~~Hsl~V~~~a~~ia~~~~~d~~~~~~AaLlHDIGk~~~~~~~e~~~~   79 (231)
T 2pjq_A            2 AGDPXITETQLTAIQTYALQKL--AHDHSGHGRDHLQRVNRLARRLAKDEGANLNLTLAAAWLHDVIDDKLXANPAKAHQ   79 (231)
T ss_dssp             ----CCCHHHHHHHHHHHHTSS--TTCCSSCSHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHC---------CHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH--CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHH
T ss_conf             9870404999999999999984--56977678799999999999999884999999999999975212113588677899


Q ss_pred             HHHHHCCCCCCCCCHHHHH-HHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
Q ss_conf             9973125545776577887-543211467010002478887763475778864445521001457766764022313366
Q gi|254780286|r  123 ELLSSYGGFDHNIQSFRIV-TELECSYADFDGINLTWETLEGLIGHNGPILPQDLDKPRIIPRIFSDYYHIHGLSLANFA  201 (410)
Q Consensus       123 ~~~~~~~gFegNaQ~~Ril-t~LE~~~~~~~GLNLT~atL~~iiKyp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (410)
                      .|.+...++..+.+-...+ .-+........+.|++..++.+.+++......    ........................
T Consensus        80 ~~~~~~~~~~~~~~~~~~v~~~I~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  155 (231)
T 2pjq_A           80 DLIVQLNAQNVTADDQTAIFAIIDHXSFSKSFNGPQKLSLEGQVVQDADRLD----AIGAIGIARALYYSGHVGEKIYDP  155 (231)
T ss_dssp             HHHHHHHTTTCCHHHHHHHHHHHTSCCTGGGGGCCCCCCSHHHHHHHHHHHT----TSHHHHHHHHHHHHHHHTCCSCCT
T ss_pred             HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH----HCCHHHHHHHHHHHHHCCCCCCCC
T ss_conf             9999987199898999999999994898823678987689999999888987----432177999999988608866686


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
Q ss_conf             7321798656554432120798998753067763
Q gi|254780286|r  202 SLEGQVAAIADDIAYDAHDIDDGVRAGLLTVDML  235 (410)
Q Consensus       202 slEa~iveaADDIAY~~hDlEDai~~gli~~~~l  235 (410)
                      +.+...+..++++++...+..+....+++...+.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (231)
T 2pjq_A          156 AIAPREHXTREQYRHQPGTAINHFYEKLFKLAAL  189 (231)
T ss_dssp             TSCCCSSCCHHHHHHSCCCTTHHHHHTGGGHHHH
T ss_pred             CCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf             5566654347776318851889999999977876