HHsearch alignment of GI: 254780286 and MMDB domain: 3b57_A_
>3b57_A (A:) LIN1889 protein; Q92AN1, X-RAY, NESG, structural genomics, PSI-2, protein structure initiative; 3.00A {Listeria innocua CLIP11262}
Probab=98.59 E-value=8.3e-08 Score=76.95 Aligned_cols=111 Identities=12% Similarity=0.041 Sum_probs=77.0
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC
Q ss_conf 98706620888999999999998839998899999988862899886547899999973125545776577887543211
Q gi|254780286|r 68 RDHYRTRLMHTIEVSQIARSLARALRIDEDLVEAIALAHDFGHPPFGHVGEDVLQELLSSYGGFDHNIQSFRIVTELECS 147 (410)
Q Consensus 68 ~d~~rtRLtHslEVa~i~rsi~~~l~~~~dlvea~~L~HDiGhpPFGH~GE~al~~~~~~~~gFegNaQ~~Rilt~LE~~ 147 (410)
...-.+|.+||+.|+.++..||+.+++|++++..|||.||||..+++|.++.....+..-......
T Consensus 20 ~~~~~~~~~Hs~~Va~~a~~ia~~lg~d~~~l~~AalLHDiGk~~~~~~~~~~~~~~~~~~~~~~~-------------- 85 (209)
T 3b57_A 20 NETTGHDWSHIKRVWKLSKEIQSKEGGDLFTIELAALFHDYSDIKLTTDEQEATKTLINWXETKEI-------------- 85 (209)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHTTCCC-------CHHHHHHHHHHHHTTC--------------
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC--------------
T ss_conf 799887989999999999999988599899999999975413345787455668999999987899--------------
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 467010002478887763475778864445521001457766764022313366732179865655443212
Q gi|254780286|r 148 YADFDGINLTWETLEGLIGHNGPILPQDLDKPRIIPRIFSDYYHIHGLSLANFASLEGQVAAIADDIAYDAH 219 (410)
Q Consensus 148 ~~~~~GLNLT~atL~~iiKyp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~slEa~iveaADDIAY~~h 219 (410)
|.++.-.+..+|.-|-....... ....+.++.|+..+|.+.-...
T Consensus 86 -----~~~~~~~v~~~I~~Hhe~~~g~g----------------------~p~~~~~~~i~~~~d~~~~~~~ 130 (209)
T 3b57_A 86 -----PSELIKKIIRIIQSVSFKKGKNT----------------------FKALTIEEKIVQDADRLDAIGA 130 (209)
T ss_dssp -----CHHHHHHHHHHHHHHC-------------------------------CCCHHHHHHHHHHHHTTSHH
T ss_pred -----CHHHHHHHHHHHHHHHHCCCCCC----------------------CCCCCHHHHHHHHHHHHHHCCC
T ss_conf -----99999999999998774035788----------------------8975789999997888860376