HHsearch results for GI: 254780286 and protein with PDBid: 3ljx_A
>3ljx_A MMOQ response regulator; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Methylococcus capsulatus} PDB: 3ljv_A
Probab=93.97 E-value=0.036 Score=34.16 Aligned_cols=84 Identities=11% Similarity=0.097 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 0888999999999998839-998899999988862899886547899999973125545776577887543211467010
Q gi|254780286|r 75 LMHTIEVSQIARSLARALR-IDEDLVEAIALAHDFGHPPFGHVGEDVLQELLSSYGGFDHNIQSFRIVTELECSYADFDG 153 (410)
Q Consensus 75 LtHslEVa~i~rsi~~~l~-~~~dlvea~~L~HDiGhpPFGH~GE~al~~~~~~~~gFegNaQ~~Rilt~LE~~~~~~~G 153 (410)
..||+.+|.+++.|++.++ .+++.+-.+||.||||-..+-...-+...++.+.- .+-.. ...|+..
T Consensus 110 w~hs~~~A~~a~~la~~~~~~~~~~a~~aGLLhdiG~l~l~~~~p~~~~~~~~~~-------~~~~~-~~~E~~~----- 176 (288)
T 3ljx_A 110 WQKSLARAVALQSITAQASTVAPKEAFTLGLLADVGRLALATAWPEEYSECLRKA-------DGEAL-IALERER----- 176 (288)
T ss_dssp HHHHHHHHHHHHHHHHTSSSSCHHHHHHHHHHTTHHHHHHHHHCHHHHHHHHHHC-------CHHHH-HHHHHHH-----
T ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHC-------CCCCH-HHHHHHH-----
T ss_conf 9999999999999999848999999999899987279999786769999999874-------37774-8999999-----
Q ss_pred CCHHHHHHHHHHCCCCCC
Q ss_conf 002478887763475778
Q gi|254780286|r 154 INLTWETLEGLIGHNGPI 171 (410)
Q Consensus 154 LNLT~atL~~iiKyp~~~ 171 (410)
+..|++.+++.+.-.|..
T Consensus 177 ~G~~h~~ig~~l~~~W~l 194 (288)
T 3ljx_A 177 FATDHDELTRMLLTDWGF 194 (288)
T ss_dssp HSSCHHHHHHHHHHHTTC
T ss_pred HCCCHHHHHHHHHHHCCC
T ss_conf 888999999999998597