HHSEARCH alignment of GI: 254780286 and SCOP domain: d2pjqa1

Alignment

Probab=97.28  E-value=0.00034  Score=47.30  Aligned_cols=42  Identities=26%  Similarity=0.202  Sum_probs=38.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC
Q ss_conf             620888999999999998839998899999988862899886
Q gi|254780286|r   73 TRLMHTIEVSQIARSLARALRIDEDLVEAIALAHDFGHPPFG  114 (410)
Q Consensus        73 tRLtHslEVa~i~rsi~~~l~~~~dlvea~~L~HDiGhpPFG  114 (410)
                      +-+-|++-|.+.|+.|++..+.|.++|.+|||.||||..+.-
T Consensus        25 Hd~~H~~RV~~~A~~Ia~~e~~D~~vv~~AAlLHDigd~k~~   66 (215)
T d2pjqa1          25 HGRDHLQRVNRLARRLAKDEGANLNLTLAAAWLHDVIDDKLM   66 (215)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHC----
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
T ss_conf             788999999999999998859999999999999886010035

SCOP domain information

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: HD domain
domain: Uncharacterized protein LP2664
species: Lactobacillus plantarum [TaxId: 1590]