HHSEARCH alignment of GI: 254780286 and SCOP domain: d2qgsa1

Alignment

Probab=97.40  E-value=0.00023  Score=48.66  Aligned_cols=55  Identities=25%  Similarity=0.271  Sum_probs=44.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHCCCCCCCCC--HHHHHHHHHHH
Q ss_conf             6208889999999999988399-9889999998886289988654--78999999731
Q gi|254780286|r   73 TRLMHTIEVSQIARSLARALRI-DEDLVEAIALAHDFGHPPFGHV--GEDVLQELLSS  127 (410)
Q Consensus        73 tRLtHslEVa~i~rsi~~~l~~-~~dlvea~~L~HDiGhpPFGH~--GE~al~~~~~~  127 (410)
                      +-+.|++-|...|+.|+...+. +..+|++|||.||||..+..|.  |.+....|+.+
T Consensus        25 Hd~~H~~RV~~~A~~Ia~~e~~~d~~vv~~AAlLHDigd~k~~~e~~~a~~a~~~L~~   82 (216)
T d2qgsa1          25 HDIAHVERVYNNACYIAKRENITDTLVIELSSLLHDTVDSKLTDEILAYDQLKQFLST   82 (216)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCSCCHHHHHHHHHTTTTCCSSSCHHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
T ss_conf             6879999999999999987499728999999998630321234326789999999988

SCOP domain information

class: All alpha proteins
fold: HD-domain/PDEase-like
superfamily: HD-domain/PDEase-like
family: HD domain
domain: Uncharacterized protein SE1688
species: Staphylococcus epidermidis [TaxId: 1282]