RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= gi|254780286|ref|YP_003064699.1| deoxyguanosinetriphosphate
triphosphohydrolase-like protein [Candidatus Liberibacter asiaticus
str. psy62]
         (410 letters)



>d2heka1 a.211.1.1 (A:1-369) Hypothetical protein aq_1910 {Aquifex
           aeolicus [TaxId: 63363]}
          Length = 369

 Score = 89.2 bits (220), Expect = 6e-19
 Identities = 37/158 (23%), Positives = 60/158 (37%), Gaps = 3/158 (1%)

Query: 39  EFQRDRDRMIHTTAFRRLKDKTQVFFHRQ--RDHYRTRLMHTIEVSQIARSLARALRIDE 96
                  R+I +  F+RL+   Q+            TR  H++ V  I   +  +L++ E
Sbjct: 14  RVGEAGLRLIDSFPFQRLRYVKQLGLAYLVFPSAQHTRFEHSLGVYHITERICESLKVKE 73

Query: 97  -DLVEAIALAHDFGHPPFGHVGEDVLQELLSSYGGFDHNIQSFRIVTELECSYADFDGIN 155
            +LV+   L HD GHPPF H  E +L    S     +  I+   I   L+  Y+  D   
Sbjct: 74  KELVKLAGLLHDLGHPPFSHTTEVLLPRERSHEDFTERVIKETEIYEILKQDYSHEDIER 133

Query: 156 LTWETLEGLIGHNGPILPQDLDKPRIIPRIFSDYYHIH 193
           L   TL         +L + +       R+       +
Sbjct: 134 LVRITLGKPEDEEEKLLSEIITGEFGSDRMDYLRRDAY 171


>d2o6ia1 a.211.1.1 (A:1-453) Hypothetical protein EF1143
           {Enterococcus faecalis [TaxId: 1351]}
          Length = 453

 Score = 46.3 bits (109), Expect = 5e-06
 Identities = 23/124 (18%), Positives = 43/124 (34%), Gaps = 29/124 (23%)

Query: 46  RMIHTTAFRRLKDKTQV----FFHRQRDHYRTRLMHTIEVSQIARSLARALRI------- 94
            +I++   +RL+   Q+    F     +H  +R  H++ V +I R +    +        
Sbjct: 33  DLINSAEVQRLRRIKQLGTSSFTFHGAEH--SRFSHSLGVYEITRRICEIFQRNYSVERL 90

Query: 95  --------DEDLVEAIALAHDFGHPPFGHVGEDVLQELLSSYGGFDHNIQSFRIVTELEC 146
                   +  +    AL HD GH P+ H                +H   + +I+T  E 
Sbjct: 91  GENGWNDDERLITLCAALLHDVGHGPYSHT--------FEHIFDTNHEAITVQIITSPET 142

Query: 147 SYAD 150
               
Sbjct: 143 EVYQ 146


>d3dtoa1 a.211.1.1 (A:2-213) Uncharacterized protein BH2835
           {Bacillus halodurans [TaxId: 86665]}
          Length = 212

 Score = 40.1 bits (93), Expect = 3e-04
 Identities = 16/89 (17%), Positives = 34/89 (38%)

Query: 77  HTIEVSQIARSLARALRIDEDLVEAIALAHDFGHPPFGHVGEDVLQELLSSYGGFDHNIQ 136
           H   V+ +A+++    ++D  +V+  AL HD          E   Q+L+          Q
Sbjct: 28  HIRRVTLMAKAIGEQEKVDVFVVQIAALFHDLIDDKLVDDPETAKQQLIDWMEAAGVPSQ 87

Query: 137 SFRIVTELECSYADFDGINLTWETLEGLI 165
                 ++  + +   G   +  T E ++
Sbjct: 88  KIDHTMDIINTISFKGGHGQSLATREAMV 116


>d2pq7a1 a.211.1.1 (A:1-217) Predicted hydrolase mes0020 {Uncultured
           thermotogales bacterium [TaxId: 221214]}
          Length = 217

 Score = 37.8 bits (87), Expect = 0.002
 Identities = 13/43 (30%), Positives = 16/43 (37%)

Query: 77  HTIEVSQIARSLARALRIDEDLVEAIALAHDFGHPPFGHVGED 119
           HT  V + A  +A   + D       AL HD   P     G D
Sbjct: 36  HTFRVMENASEIASREKCDLQKAIIAALLHDIKRPHEALTGVD 78


>d3djba1 a.211.1.1 (A:2-214) Uncharacterized protein BT9727_1981
           {Bacillus thuringiensis [TaxId: 1428]}
          Length = 213

 Score = 33.1 bits (75), Expect = 0.044
 Identities = 17/96 (17%), Positives = 36/96 (37%)

Query: 77  HTIEVSQIARSLARALRIDEDLVEAIALAHDFGHPPFGHVGEDVLQELLSSYGGFDHNIQ 136
           H   V ++A SL+     +  ++E  AL HD          E  ++++           +
Sbjct: 28  HIRRVHKMAISLSEQEGGNRFIIEMAALLHDVADEKLNESEEAGMKKVSDWLEELHVEEE 87

Query: 137 SFRIVTELECSYADFDGINLTWETLEGLIGHNGPIL 172
             + V  +  + +   G     E++EG +  +   L
Sbjct: 88  ESKHVLHIIANMSYKGGHGGKVESIEGKLVQDADRL 123


>d2pjqa1 a.211.1.1 (A:1-215) Uncharacterized protein LP2664
           {Lactobacillus plantarum [TaxId: 1590]}
          Length = 215

 Score = 31.9 bits (72), Expect = 0.10
 Identities = 17/95 (17%), Positives = 31/95 (32%), Gaps = 5/95 (5%)

Query: 77  HTIEVSQIARSLARALRIDEDLVEAIALAHDFGHPPF---GHVGEDVLQELLSSYGGFDH 133
           H   V+++AR LA+    + +L  A A  HD                L   L++      
Sbjct: 29  HLQRVNRLARRLAKDEGANLNLTLAAAWLHDVIDDKLMANPAKAHQDLIVQLNAQNVTAD 88

Query: 134 NIQSFRIVTELECSYADFDGINLTWETLEGLIGHN 168
           +     I   ++              +LEG +  +
Sbjct: 89  DQT--AIFAIIDHMSFSKSFNGPQKLSLEGQVVQD 121


>d3b57a1 a.211.1.1 (A:1-201) Uncharacterized protein Lin1889
           {Listeria innocua [TaxId: 1642]}
          Length = 201

 Score = 30.8 bits (69), Expect = 0.22
 Identities = 11/76 (14%), Positives = 25/76 (32%), Gaps = 5/76 (6%)

Query: 59  KTQVFFHRQRDHYRT--RLMHTIEVSQIARSLARALRIDEDLVEAIALAHDFGHPPFGHV 116
             + + H   ++  T     H   V ++++ +      D   +E  AL HD+        
Sbjct: 9   SAKNWMHSHFENETTGHDWSHIKRVWKLSKEIQSKEGGDLFTIELAALFHDYSDIKLTTD 68

Query: 117 GE---DVLQELLSSYG 129
            +     L   + +  
Sbjct: 69  EQEATKTLINWMETKE 84


>d1kfwa1 c.1.8.5 (A:10-327,A:389-444) Psychrophilic chitinase B
           {Arthrobacter sp., tad20 [TaxId: 1667]}
          Length = 374

 Score = 27.5 bits (60), Expect = 2.2
 Identities = 11/47 (23%), Positives = 18/47 (38%)

Query: 132 DHNIQSFRIVTELECSYADFDGINLTWETLEGLIGHNGPILPQDLDK 178
             N+ +F        +   FDGI++ WE      G  G  +    D+
Sbjct: 156 KGNLPNFEGRGGAGAAAGIFDGIDIDWEWPGTNSGLAGNGVDTVNDR 202


>d1p1ja1 c.2.1.3 (A:9-322,A:438-533) Myo-inositol 1-phosphate
           synthase {Baker's yeast (Saccharomyces cerevisiae)
           [TaxId: 4932]}
          Length = 410

 Score = 25.9 bits (57), Expect = 6.2
 Identities = 6/34 (17%), Positives = 14/34 (41%), Gaps = 6/34 (17%)

Query: 212 DDIAYDAHDIDDG------VRAGLLTVDMLKEIS 239
           +D      DI++        R+ +L  D+ + + 
Sbjct: 132 NDFVVSGWDINNADLYEAMQRSQVLEYDLQQRLK 165


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.325    0.140    0.415 

Gapped
Lambda     K      H
   0.267   0.0521    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,620,319
Number of extensions: 79219
Number of successful extensions: 284
Number of sequences better than 10.0: 1
Number of HSP's gapped: 280
Number of HSP's successfully gapped: 19
Length of query: 410
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 323
Effective length of database: 1,213,086
Effective search space: 391826778
Effective search space used: 391826778
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 54 (25.1 bits)