HHsearch alignment for GI: 254780288 and conserved domain: COG0708

Probab=100.00  E-value=0  Score=539.48  Aligned_cols=256  Identities=43%  Similarity=0.815  Sum_probs=245.2

Q ss_pred             CEEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHCCHHHHHHCCC-EEEEEECCCCCCEEEEEEECCEEEEEC
Q ss_conf             0799871031888899899999872898899985657944589778732897-899930477651489874031378632
Q gi|254780288|r    4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKSYNGVAILSKYQPIEIVTH   82 (281)
Q Consensus         4 lrI~TwNinglr~r~~~l~~~l~~~~pDIi~LQEvk~~~~~~~~~~~~~~gy-~~~~~~~k~~~GvaIlsk~~~~~v~~~   82 (281)
T Consensus         1 mkI~SwNVNgiRar~~~~~~~l~~~~pDVlclQEtK~~~~~fp~~~~~~~GY~~~~~~gqKgysGVailsr~~~~~v~~g   80 (261)
T COG0708           1 MKIASWNVNGLRARLKKLLDWLEEEQPDVLCLQETKAQDEQFPREELEALGYHHVFNHGQKGYSGVAILSKKPPDDVRRG   80 (261)
T ss_pred             CEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHCCCEEEEECCCCCCCEEEEEECCCCHHHHCC
T ss_conf             90689830428989999999998729998999741467666897677527951899527677344899984683021027


Q ss_pred             CCC-CCCCCCCCEECCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCC
Q ss_conf             555-6443233010110002320799963104667854431012367777655332223201476000011014686742
Q gi|254780288|r   83 LPG-DDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH  161 (281)
Q Consensus        83 ~~~-~~~d~~~R~i~~~i~~~~~~i~v~n~y~P~g~~~~~~~~~~k~~~~~~l~~~l~~~~~~~~~vIi~GDFN~a~~~~  161 (281)
T Consensus        81 ~~~~~~~d~e~R~I~a~~~----~~~v~~~Y~PnG~~~~~~k~~yKl~f~~~l~~~l~~l~~~~~~~vl~GD~NIap~~i  156 (261)
T COG0708          81 FPGEEEDDEEGRVIEAEFD----GFRVINLYFPNGSSIGLEKFDYKLRFLDALRNYLEELLKKGKPVVLCGDFNIAPEEI  156 (261)
T ss_pred             CCCCCCCCCCCCEEEEEEC----CEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHH
T ss_conf             9987665434757999979----899999972799988871067899999999999999874599879966631178532


Q ss_pred             CCHHHH-HC--CCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCEEEEEEECHHHHHHHHC
Q ss_conf             000012-10--487344634556532103310000001337888720035787675255777135699947789833320
Q gi|254780288|r  162 DCYNPI-IW--ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS  238 (281)
Q Consensus       162 D~~~~~-~~--~~~~~~~~~er~~~~~l~~~gl~D~~r~~~~~~~~yT~~~~~~~~~~~n~G~RID~il~s~~l~~~v~~  238 (281)
T Consensus       157 Dv~~~~~~~~n~~~~~f~~eeR~~~~~ll~~G~~D~~R~~~p~~~~YTwW~YR~~~~~~n~G~RID~~l~S~~L~~~~~~  236 (261)
T COG0708         157 DVANPKKRWLNEGNSGFLPEERAWFRRLLNAGFVDTFRLFHPEPEKYTWWDYRANAARRNRGWRIDYILVSPALADRLKD  236 (261)
T ss_pred             CCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCEEEEEEEECHHHHHHHHH
T ss_conf             12572555401688898989999999998753064567648999963512562130566386068889718999988866


Q ss_pred             EEEECHHHCCCCCCCCCCEEEEEEC
Q ss_conf             2871222068676762219999955
Q gi|254780288|r  239 ARIDTKPRGWTKPSDHTPVIVSLDI  263 (281)
Q Consensus       239 ~~I~~~~~~~~~~SDH~Pv~~~l~l  263 (281)
T Consensus       237 a~I~~~~rg~e~pSDHaPV~~e~~~  261 (261)
T COG0708         237 AGIDREVRGWEKPSDHAPVWVELDL  261 (261)
T ss_pred             CCCCHHHHCCCCCCCCCCEEEEECC
T ss_conf             6863788558888885757999629