HHsearch alignment for GI: 254780288 and conserved domain: smart00476
>smart00476 DNaseIc deoxyribonuclease I. Deoxyribonuclease I catalyzes the endonucleolytic cleavage of double-stranded DNA. The enzyme is secreted outside the cell and also involved in apoptosis in the nucleus.
Probab=99.63 E-value=2e-14 Score=100.36 Aligned_cols=143 Identities=19% Similarity=0.255 Sum_probs=71.2
Q ss_pred CCCEEEEEEECCH--H-HHHHHHHHHHHH--HCCCEEEEEEEECCHHHCC---HHHHHH---CCCEEEEEECCCCC----
Q ss_conf 7007998710318--8-889989999987--2898899985657944589---778732---89789993047765----
Q gi|254780288|r 2 SVVTVATWNVNSI--R-ARIHNLAAWIKE--NNPDIICLQETKTEDKNFP---FETLQS---LNYHIETCGQKSYN---- 66 (281)
Q Consensus 2 ~~lrI~TwNingl--r-~r~~~l~~~l~~--~~pDIi~LQEvk~~~~~~~---~~~~~~---~gy~~~~~~~k~~~---- 66 (281)
T Consensus 16 ~~lrIasFNIq~FG~sK~~~~~v~~~l~kI~~ryDiv~IQEV~d~~~~av~~L~~~LN~~~~~~y~~~iS~rlGr~sykE 95 (276)
T smart00476 16 ASLRICAFNIQSFGDSKMSNATLMSIIVKILSRYDIALVQEVRDSDLSAVPKLMDQLNSDSPNTYSYVSSEPLGRNSYKE 95 (276)
T ss_pred CCEEEEEEECHHHCCCCCCCHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCE
T ss_conf 62599998603237340137589999999997398899999984887789999999963688886078567788876426
Q ss_pred CEEEEEEECCEEEEEC--CC------CCCCCCCCCEECCCCCCC---CCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 1489874031378632--55------564432330101100023---207999631046678544310123677776553
Q gi|254780288|r 67 GVAILSKYQPIEIVTH--LP------GDDLDVQARFIEATFTIN---TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 (281)
Q Consensus 67 GvaIlsk~~~~~v~~~--~~------~~~~d~~~R~i~~~i~~~---~~~i~v~n~y~P~g~~~~~~~~~~k~~~~~~l~ 135 (281)
T Consensus 96 qYafiYR~d~v~v~~~y~y~D~~~~~~D~F~REP--fv~~F~~~~t~~~~F~lv~~Ht~---P~~a~------~Eid~L~ 164 (276)
T smart00476 96 QYLFLYRSDLVSVLDSYLYDDGCECGNDVFSREP--FVVKFSSPSTAVKEFVIVPLHTT---PEAAV------AEIDALY 164 (276)
T ss_pred EEEEEEECCEEEECCCEEECCCCCCCCCCEECCC--EEEEEECCCCCCCCEEEEEEECC---CCCCH------HHHHHHH
T ss_conf 7999982556887263582477789887271399--79999758966662699997448---23027------8999999
Q ss_pred H---HHHHHHCCCCHHHHHHHCCC
Q ss_conf 3---22232014760000110146
Q gi|254780288|r 136 R---FASQRLELEEPLIFAGDYNI 156 (281)
Q Consensus 136 ~---~l~~~~~~~~~vIi~GDFN~ 156 (281)
T Consensus 165 dV~~dv~~~~-~~~diiilGDFNA 187 (276)
T smart00476 165 DVYLDVRQKW-GTEDVIFMGDFNA 187 (276)
T ss_pred HHHHHHHHHC-CCCCEEEECCCCC
T ss_conf 9999998744-7666799624568