HHsearch results for GI: 254780288 and protein with PDBid: 2f1n_A
>2f1n_A CDT B, cytolethal distending toxin subunit B; E.coli, DNAse I, microbatch; 1.73A {Escherichia coli} SCOP: d.151.1.1
Probab=99.97 E-value=4.5e-31 Score=192.74 Aligned_cols=217 Identities=18% Similarity=0.097 Sum_probs=121.1
Q ss_pred CCCEEEEEEECCHHHH-----HHHHHHHHH-HHCCCEEEEEEEECCHHHCCH--HHHHH--CCC---------------E
Q ss_conf 7007998710318888-----998999998-728988999856579445897--78732--897---------------8
Q gi|254780288|r 2 SVVTVATWNVNSIRAR-----IHNLAAWIK-ENNPDIICLQETKTEDKNFPF--ETLQS--LNY---------------H 56 (281)
Q Consensus 2 ~~lrI~TwNinglr~r-----~~~l~~~l~-~~~pDIi~LQEvk~~~~~~~~--~~~~~--~gy---------------~ 56 (281)
+.+||+||||+|.++. ...+..+|. ..+|||||||||+........ ..... ..+ .
T Consensus 14 ~~lri~TwNv~~~~~~~~~~~~~~~~~~i~~~~~~DIi~LQEv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (262)
T 2f1n_A 14 TDFRVATWNLQGASATTESKWNINVRQLISGENAVDILAVQEAGSPPSTAVDTGRVIPSPGIPVRELIWNLSTNSRPQQV 93 (262)
T ss_dssp GGCCEEEEEEEECTTSCHHHHHTHHHHHHSSTTCCSEEEEEEECSCCTTCEECCCCCCCSSCCCEEEEEECCSSSSSCEE
T ss_pred CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHCCCHHHHHHHHCCCCCHHHHHHCCCCCCCCCEE
T ss_conf 76299998489677876553589999999737898999997478610230566655402465245543111112477247
Q ss_pred EEEEE----CCCCCCEEEEEEECCEEEEECCCCCCCCCCCCEECCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHH
Q ss_conf 99930----47765148987403137863255564432330101100023207999631046678544310123677776
Q gi|254780288|r 57 IETCG----QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132 (281)
Q Consensus 57 ~~~~~----~k~~~GvaIlsk~~~~~v~~~~~~~~~d~~~R~i~~~i~~~~~~i~v~n~y~P~g~~~~~~~~~~k~~~~~ 132 (281)
+.+.. ..+.+|++++||.++..+...-+. ..+++.+. ......+.++|+|++.+...+... ..++..
T Consensus 94 ~~~~~~~~~~~~~~g~~ilsk~~~~~~~~~~~~---~~~~~~~~---~~~~~~~~~~~~Hl~~~~~~~~~~---~~~~~~ 164 (262)
T 2f1n_A 94 YIYFSAVDALGGRVNLALVSNRRADEVFVLSPV---RQGGRPLL---GIRIGNDAFFTAHAIAMRNNDAPA---LVEEVY 164 (262)
T ss_dssp EEEEECSCSSSCSSCEEEEESSCCSEEEEECCS---STTCCCEE---EEEETTEEEEEEECCSSSSCSHHH---HHHHHH
T ss_pred EEEEECCCCCCCEECCEEEECCCCCCCEECCCC---CCCCCEEE---EEEECCCEEEEEECCCCCCCCHHH---HHHHHH
T ss_conf 898631344463412289976561003220787---65674357---887177269999737888730899---999999
Q ss_pred HHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCEECCCCCC
Q ss_conf 55332223201476000011014686742000012104873446345565321033100000013378887200357876
Q gi|254780288|r 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212 (281)
Q Consensus 133 ~l~~~l~~~~~~~~~vIi~GDFN~a~~~~D~~~~~~~~~~~~~~~~er~~~~~l~~~gl~D~~r~~~~~~~~yT~~~~~~ 212 (281)
.+............++|+|||||+.|.+. ...+..++.|.++..++.. +||+
T Consensus 165 ~~~~~~~~~~~~~~~~iv~GDfN~~~~~~----------------------~~~~~~~~~~~~~~~~~~~--~t~~---- 216 (262)
T 2f1n_A 165 NFFRDSRDPVHQALNWMILGDFNREPADL----------------------EMNLTVPVRRASEIISPAA--ATQT---- 216 (262)
T ss_dssp HHHHTCSSHHHHTCEEEEEEECSSCHHHH----------------------HTTSCHHHHHTEEEECCSS--CSBT----
T ss_pred HHHHHHHHHHCCCCCEEECCCCCCCCHHH----------------------HHHHHHHHHHHHHHCCCCC--CCCC----
T ss_conf 99999988536799757347646571567----------------------7766534333203128998--7579----
Q ss_pred CCCCCCCCCEEEEEEECHHHHHHHHCEE--EECHHHCCCCCCCCCCEEEEE
Q ss_conf 7525577713569994778983332028--712220686767622199999
Q gi|254780288|r 213 DSWSKNKGIRIDHIMLSPEATSLLHSAR--IDTKPRGWTKPSDHTPVIVSL 261 (281)
Q Consensus 213 ~~~~~n~G~RID~il~s~~l~~~v~~~~--I~~~~~~~~~~SDH~Pv~~~l 261 (281)
.|.||||||+|+++..+..... +.........+|||+||.+.|
T Consensus 217 ------~~~riD~i~~s~~~~~~~~~~~~~~~~~~~~~~~~SDH~PV~~~~ 261 (262)
T 2f1n_A 217 ------SQRTLDYAVAGNSVAFRPSPLQAGIVYGARRTQISSDHFPVGVSR 261 (262)
T ss_dssp ------TSCCCEEEEEEESSCCCCCCCEEEETTTTSCCCCSCSBCCEEEEC
T ss_pred ------CCCEEEEEEECCCHHCCCCEEEEEEEECCCCCCCCCCCHHEEEEE
T ss_conf ------998299999808165352136899850335899648854238984