HHsearch results for GI: 254780288 and protein with PDBid: 2f1n_A

>2f1n_A CDT B, cytolethal distending toxin subunit B; E.coli, DNAse I, microbatch; 1.73A {Escherichia coli} SCOP: d.151.1.1
Probab=99.97  E-value=4.5e-31  Score=192.74  Aligned_cols=217  Identities=18%  Similarity=0.097  Sum_probs=121.1

Q ss_pred             CCCEEEEEEECCHHHH-----HHHHHHHHH-HHCCCEEEEEEEECCHHHCCH--HHHHH--CCC---------------E
Q ss_conf             7007998710318888-----998999998-728988999856579445897--78732--897---------------8
Q gi|254780288|r    2 SVVTVATWNVNSIRAR-----IHNLAAWIK-ENNPDIICLQETKTEDKNFPF--ETLQS--LNY---------------H   56 (281)
Q Consensus         2 ~~lrI~TwNinglr~r-----~~~l~~~l~-~~~pDIi~LQEvk~~~~~~~~--~~~~~--~gy---------------~   56 (281)
                      +.+||+||||+|.++.     ...+..+|. ..+|||||||||+........  .....  ..+               .
T Consensus        14 ~~lri~TwNv~~~~~~~~~~~~~~~~~~i~~~~~~DIi~LQEv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (262)
T 2f1n_A           14 TDFRVATWNLQGASATTESKWNINVRQLISGENAVDILAVQEAGSPPSTAVDTGRVIPSPGIPVRELIWNLSTNSRPQQV   93 (262)
T ss_dssp             GGCCEEEEEEEECTTSCHHHHHTHHHHHHSSTTCCSEEEEEEECSCCTTCEECCCCCCCSSCCCEEEEEECCSSSSSCEE
T ss_pred             CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHCCCHHHHHHHHCCCCCHHHHHHCCCCCCCCCEE
T ss_conf             76299998489677876553589999999737898999997478610230566655402465245543111112477247


Q ss_pred             EEEEE----CCCCCCEEEEEEECCEEEEECCCCCCCCCCCCEECCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHH
Q ss_conf             99930----47765148987403137863255564432330101100023207999631046678544310123677776
Q gi|254780288|r   57 IETCG----QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK  132 (281)
Q Consensus        57 ~~~~~----~k~~~GvaIlsk~~~~~v~~~~~~~~~d~~~R~i~~~i~~~~~~i~v~n~y~P~g~~~~~~~~~~k~~~~~  132 (281)
                      +.+..    ..+.+|++++||.++..+...-+.   ..+++.+.   ......+.++|+|++.+...+...   ..++..
T Consensus        94 ~~~~~~~~~~~~~~g~~ilsk~~~~~~~~~~~~---~~~~~~~~---~~~~~~~~~~~~Hl~~~~~~~~~~---~~~~~~  164 (262)
T 2f1n_A           94 YIYFSAVDALGGRVNLALVSNRRADEVFVLSPV---RQGGRPLL---GIRIGNDAFFTAHAIAMRNNDAPA---LVEEVY  164 (262)
T ss_dssp             EEEEECSCSSSCSSCEEEEESSCCSEEEEECCS---STTCCCEE---EEEETTEEEEEEECCSSSSCSHHH---HHHHHH
T ss_pred             EEEEECCCCCCCEECCEEEECCCCCCCEECCCC---CCCCCEEE---EEEECCCEEEEEECCCCCCCCHHH---HHHHHH
T ss_conf             898631344463412289976561003220787---65674357---887177269999737888730899---999999


Q ss_pred             HHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCEECCCCCC
Q ss_conf             55332223201476000011014686742000012104873446345565321033100000013378887200357876
Q gi|254780288|r  133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA  212 (281)
Q Consensus       133 ~l~~~l~~~~~~~~~vIi~GDFN~a~~~~D~~~~~~~~~~~~~~~~er~~~~~l~~~gl~D~~r~~~~~~~~yT~~~~~~  212 (281)
                      .+............++|+|||||+.|.+.                      ...+..++.|.++..++..  +||+    
T Consensus       165 ~~~~~~~~~~~~~~~~iv~GDfN~~~~~~----------------------~~~~~~~~~~~~~~~~~~~--~t~~----  216 (262)
T 2f1n_A          165 NFFRDSRDPVHQALNWMILGDFNREPADL----------------------EMNLTVPVRRASEIISPAA--ATQT----  216 (262)
T ss_dssp             HHHHTCSSHHHHTCEEEEEEECSSCHHHH----------------------HTTSCHHHHHTEEEECCSS--CSBT----
T ss_pred             HHHHHHHHHHCCCCCEEECCCCCCCCHHH----------------------HHHHHHHHHHHHHHCCCCC--CCCC----
T ss_conf             99999988536799757347646571567----------------------7766534333203128998--7579----


Q ss_pred             CCCCCCCCCEEEEEEECHHHHHHHHCEE--EECHHHCCCCCCCCCCEEEEE
Q ss_conf             7525577713569994778983332028--712220686767622199999
Q gi|254780288|r  213 DSWSKNKGIRIDHIMLSPEATSLLHSAR--IDTKPRGWTKPSDHTPVIVSL  261 (281)
Q Consensus       213 ~~~~~n~G~RID~il~s~~l~~~v~~~~--I~~~~~~~~~~SDH~Pv~~~l  261 (281)
                            .|.||||||+|+++..+.....  +.........+|||+||.+.|
T Consensus       217 ------~~~riD~i~~s~~~~~~~~~~~~~~~~~~~~~~~~SDH~PV~~~~  261 (262)
T 2f1n_A          217 ------SQRTLDYAVAGNSVAFRPSPLQAGIVYGARRTQISSDHFPVGVSR  261 (262)
T ss_dssp             ------TSCCCEEEEEEESSCCCCCCCEEEETTTTSCCCCSCSBCCEEEEC
T ss_pred             ------CCCEEEEEEECCCHHCCCCEEEEEEEECCCCCCCCCCCHHEEEEE
T ss_conf             ------998299999808165352136899850335899648854238984