HHsearch results for GI: 254780288 and protein with PDBid: 3g91_A
>3g91_A MTH0212, exodeoxyribonuclease; double-strand specific 3'-5' exonuclease, AP endonuclease; HET: PG4; 1.23A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fzi_A 3g0a_A 3g1k_A 3g2c_A 3g3c_A* 3g3y_A* 3g4t_A* 3g00_A 3g0r_A* 3g2d_A* 3g38_A 3g8v_A* 3ga6_A
Probab=100.00 E-value=0 Score=318.95 Aligned_cols=260 Identities=25% Similarity=0.436 Sum_probs=205.1
Q ss_pred CCCCEEEEEEECCHHH-HHHHHHHHHHHHCCCEEEEEEEECCHHHCCHHHHHHCCCEEEEE--ECCCCCCEEEEEEECCE
Q ss_conf 9700799871031888-89989999987289889998565794458977873289789993--04776514898740313
Q gi|254780288|r 1 MSVVTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC--GQKSYNGVAILSKYQPI 77 (281)
Q Consensus 1 m~~lrI~TwNinglr~-r~~~l~~~l~~~~pDIi~LQEvk~~~~~~~~~~~~~~gy~~~~~--~~k~~~GvaIlsk~~~~ 77 (281)
||+|||+||||||||+ +.+++.++|++++||||||||||+.+++++.......+++..+. .++++.|++++++.+..
T Consensus 1 ~~~mki~SwNvngl~~~~~~~~~~~i~~~~pDIi~LQEvk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (265)
T 3g91_A 1 MAVLKIISWNVNGLRAVHRKGFLKWFMEEKPDILCLQEIKAAPEQLPRKLRHVEGYRSFFTPAERKGYSGVAMYTKVPPS 80 (265)
T ss_dssp -CEEEEEEEECSCHHHHHHHTHHHHHHHHCCSEEEEECCCSCGGGSCHHHHCCTTCEEEEECBSSTTSCCEEEEESSCCS
T ss_pred CCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCC
T ss_conf 98609999992428887777399999758996999881507800089878724786168861222322434786326752
Q ss_pred EEEECCCCCCCCCCCCEECCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC
Q ss_conf 78632555644323301011000232079996310466785443101236777765533222320147600001101468
Q gi|254780288|r 78 EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 (281)
Q Consensus 78 ~v~~~~~~~~~d~~~R~i~~~i~~~~~~i~v~n~y~P~g~~~~~~~~~~k~~~~~~l~~~l~~~~~~~~~vIi~GDFN~a 157 (281)
.....++....+..++.+... ..++.+.++|+++.... ..+..........+..+.......+.+.+++||||++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (265)
T 3g91_A 81 SLREGFGVERFDTEGRIQIAD----FDDFLLYNIYFPNGAMS-EERLKYKLEFYDAFLEDVNRERDSGRNVIICGDFNTA 155 (265)
T ss_dssp EEECCCSCHHHHSBSCEEEEE----CSSCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred CCCCCCCCCCCCCHHEEEEEE----CCCEEEEEEECCCCCCC-CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCC
T ss_conf 000378876534020467552----29889999960588643-1125778899999999999985467846720651028
Q ss_pred CCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCEEEEEEECHHHHHHHH
Q ss_conf 67420000121048734463455653210331000000133788872003578767525577713569994778983332
Q gi|254780288|r 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 (281)
Q Consensus 158 ~~~~D~~~~~~~~~~~~~~~~er~~~~~l~~~gl~D~~r~~~~~~~~yT~~~~~~~~~~~n~G~RID~il~s~~l~~~v~ 237 (281)
.......++....+..++++.+|+++..+.+.||+|+|+..+++.+.+|||+++..++.+|.|+||||||+|+++.+++.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~RIDyIl~s~~l~~~v~ 235 (265)
T 3g91_A 156 HREIDLARPKENSNVSGFLPVERAWIDKFIENGYVDTFRMFNSDPGQYTWWSYRTRARERNVGWRLDYFFVNEEFKGKVK 235 (265)
T ss_dssp CSGGGBSCTGGGTTSTTSCHHHHHHHHHHHHTTEEETHHHHCCCSCCCSBCCSSTTTTTTTCCBCCEEEEEEGGGGGGEE
T ss_pred CHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEHHHCCCCCCCEECCCCCCCCCCCCCEEEEEEEECHHHHHHCC
T ss_conf 70440468666278968998999876533436981012422789996143378788755899757589997759970244
Q ss_pred CEEEECHHHCCCCCCCCCCEEEEEECCCCCCC
Q ss_conf 02871222068676762219999955887766
Q gi|254780288|r 238 SARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269 (281)
Q Consensus 238 ~~~I~~~~~~~~~~SDH~Pv~~~l~lp~~~~~ 269 (281)
++.|+.+. .+|||+||+++|+||+-.-+
T Consensus 236 ~~~v~~~~----~~SDH~PV~~el~l~~~~~~ 263 (265)
T 3g91_A 236 RSWILSDV----MGSDHCPIGLEIELLEHHHH 263 (265)
T ss_dssp EEEECTTC----CSSSBCCEEEEEECCCCC--
T ss_pred EEEECCCC----CCCCCCCEEEEEEECCCCCC
T ss_conf 99984799----99992578999991464556