PSIBLAST alignment of GI: 254780288 and protein with PDB id: 2jc4
gi|134104765|pdb|2JC4|A Chain A, 3'-5' Exonuclease (Nexo) From Neisseria Meningitidis Length = 256
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 91/260 (35%), Positives = 135/260 (51%), Gaps = 4/260 (1%)
Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
+ + TWNVNS+ R+ + + +N PDI+ LQE K + FP LQ + +H GQK
Sbjct: 1 MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60
Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
+YNGVAI+S+ P ++ LP D Q R I AT + +R+ N+Y +G + S K
Sbjct: 61 TYNGVAIVSRSVPQDVHFGLPALPDDPQRRVIAATVSG----VRVINVYCVNGEALDSPK 116
Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
+ K W F + L+ GD+NI P DCY+P W + RQ F
Sbjct: 117 FKYKEQWFAALTEFVRDEMTRHGKLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWF 176
Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
Q L ++G TD++R H Y+++DY + + G+RIDHI++SP + L R+D
Sbjct: 177 QNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVSPAMAAALKDVRVDL 236
Query: 244 KPRGWTKPSDHTPVIVSLDI 263
+ R +PSDH PV D
Sbjct: 237 ETRALERPSDHAPVTAEFDW 256