RPSBLAST alignment for GI: 254780288 and conserved domain: KOG1294

>gnl|CDD|36508 KOG1294, KOG1294, KOG1294, Apurinic/apyrimidinic endonuclease and related enzymes [Replication, recombination and repair]. Length = 335

 Score = 65.0 bits (158), Expect = 2e-11
 Identities = 60/278 (21%), Positives = 106/278 (38%), Gaps = 22/278 (7%)

Query: 3   VVTVATWNVNSIRARIHNLAA-WIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIET 59
           V+ +  W++  + A         I     D+ CL ETK    + P    T +   + + +
Sbjct: 63  VLNICPWDIAGLEACEKFSGDPEISSELRDLQCLLETKCTIDSGPCSHPTEKGYTHSLLS 122

Query: 60  CGQKSYN--GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH-G 116
           C  K     G    SK++P++   H     +    R +        +   + N Y+P+ G
Sbjct: 123 CASKKDGYSGEIDYSKFKPLK--VHYGFGAMGSDHRPVGRVIIAEFEIFILINTYVPNIG 180

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLE---LEEPLIFAGDYNIIPQPHDCYNPII-WEND 172
             + +  Y     W K       ++     L+ P++  GD N+  +  D   P++    +
Sbjct: 181 GGLVNLVYRILDRWDKEIEEKRKKQSSSKNLKAPVVICGDLNVSHEEIDPSKPLVSPAGN 240

Query: 173 AC----FTLEVRQSFQK--LQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDH 225
                 FT E R SF    L+     D  R  H D    Y+FW Y  +   +  G R D+
Sbjct: 241 TLSNAGFTPEERDSFFAELLEKGPLIDTYRELHKDQKKAYTFWKYMPNGRQRGHGERCDY 300

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           I++S    +      I ++P      SDH P+ +   +
Sbjct: 301 ILVSKPGPNNGRRFYICSRPIH---GSDHCPITLEFFL 335