RPSBLAST alignment of GI: 254780288 and protein with PDBid: 1wdu

>1wdu_A TRAS1 ORF2P; four-layered alpha/beta sandwich, RNA binding protein; 2.40A {Bombyx mori} SCOP: d.151.1.1 Length = 245

 Score =  107 bits (267), Expect = 3e-24
 Identities = 31/263 (11%), Positives = 65/263 (24%), Gaps = 40/263 (15%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
             V   N+   +     LA         I  +QE                 +   T    
Sbjct: 20  YRVLQANLQRKKLATAELAIEAATRKAAIALIQEPYVGGAKSMKGFRGVRVFQS-TAQGD 78

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
                AI      ++++ +      ++    I          + + + Y           
Sbjct: 79  GTVKAAIAVFDHDLDVIQYPQLTTNNIVVVGIRTRA----WEITLVSYYFEP-------- 126

Query: 124 YDDKISWIKRFLRFASQRLELEEP--LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                  I+ +L    +      P  LIF GD N               +    T     
Sbjct: 127 ----DKPIESYLEQIKRVERKMGPKRLIFGGDANAKSTWWGSKEDDARGDQLMGT----- 177

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
                      +      +   + +F         ++   R+D    + +   L+   R+
Sbjct: 178 ---------LGELGLHILNEGDVPTFDTIRGGKRYQS---RVDVTFCTEDMLDLIDGWRV 225

Query: 242 DTKPRGWTKPSDHTPVIVSLDIP 264
           D         SDH  ++ ++ + 
Sbjct: 226 DEDLVS----SDHNGMVFNIRLQ 244