RPSBLAST alignment of GI: 254780288 and protein with PDBid: 2jc5

>2jc5_A Exodeoxyribonuclease; hydrolase, repair phosphodiesterase, DNA repair, exonuclease, endonuclease; HET: BCN DIO GOL; 1.50A {Neisseria meningitidis} Length = 259

 Score =  142 bits (357), Expect = 1e-34
 Identities = 63/263 (23%), Positives = 115/263 (43%), Gaps = 13/263 (4%)

Query: 6   VATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC--GQ 62
           + + NVN IR+        +I  +  DI+C+QE K ++ +   +       H       +
Sbjct: 4   IISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHCAEK 63

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           + Y+GVA+ SK +P  +   +  ++ D + RF+   F      L + +LYLP G+     
Sbjct: 64  RGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDF----GRLSVISLYLPSGSSAE-E 118

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   K  ++  F             ++  GD+NI  Q  D  N    + ++ F  E R+ 
Sbjct: 119 RQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREW 178

Query: 183 FQKLQNMGFTDAI-RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             K+ +      + R  +     Y++W     +++K+ G RID+ M++PE  +   SA +
Sbjct: 179 IGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHV 238

Query: 242 DTKPRGWTKPSDHTPVIVSLDIP 264
                   K SDH P++V  D  
Sbjct: 239 YK----DEKFSDHAPLVVEYDYA 257