HHsearch alignment for GI: 254780289 and conserved domain: COG2771
>COG2771 CsgD DNA-binding HTH domain-containing proteins [Transcription].
Probab=94.19 E-value=0.25 Score=29.49 Aligned_cols=58 Identities=26% Similarity=0.373 Sum_probs=49.8
Q ss_pred HCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf 329988999999981879867468899989966789999999999999832967778756651
Q gi|254780289|r 618 ASLTPREERVLRMRFGIGMNTDHTLEEVGKQFCVTRERIRQIEAKAIRKLKHPSRSKKLRSFL 680 (682)
Q Consensus 618 ~~l~~re~~v~~~r~g~~~~~~~tl~e~~~~~~~~~er~rqi~~~a~~~l~~~~~~~~l~~~~ 680 (682)
T Consensus 3 ~~Lt~rE~~~~~l~~---~G--~s~~eia~~l~is~~tV~~h~~~i~~Kl~~~~r~~~~~~~~ 60 (65)
T COG2771 3 ADLTPREREILRLVA---QG--KSNKEIARILGISEETVKTHLRNIYRKLGVKNRVELVALAL 60 (65)
T ss_pred CCCCHHHHHHHHHHH---CC--CCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 113888999999998---69--98999999987799999999999999977586999999999