HHsearch alignment for GI: 254780289 and conserved domain: PRK00118

>PRK00118 putative DNA-binding protein; Validated.
Probab=95.58  E-value=0.04  Score=35.72  Aligned_cols=47  Identities=19%  Similarity=0.359  Sum_probs=42.3

Q ss_pred             CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCC
Q ss_conf             299889999999818798674688999899667899999999999998329
Q gi|254780289|r  619 SLTPREERVLRMRFGIGMNTDHTLEEVGKQFCVTRERIRQIEAKAIRKLKH  669 (682)
Q Consensus       619 ~l~~re~~v~~~r~g~~~~~~~tl~e~~~~~~~~~er~rqi~~~a~~~l~~  669 (682)
T Consensus        17 LLT~kQ~~~~~lyy----~~DlSl~EIAe~~~iSRQaV~D~ikr~~~~L~~   63 (105)
T PRK00118         17 LLTEKQRNYMELYY----LDDYSLGEIAEEFNVSRQAVYDNIKRTEKLLED   63 (105)
T ss_pred             HCCHHHHHHHHHHH----HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf             75599999999998----854999999899698599999999999999999