HHsearch alignment for GI: 254780289 and conserved domain: PRK00118
>PRK00118 putative DNA-binding protein; Validated.
Probab=95.58 E-value=0.04 Score=35.72 Aligned_cols=47 Identities=19% Similarity=0.359 Sum_probs=42.3
Q ss_pred CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCC
Q ss_conf 299889999999818798674688999899667899999999999998329
Q gi|254780289|r 619 SLTPREERVLRMRFGIGMNTDHTLEEVGKQFCVTRERIRQIEAKAIRKLKH 669 (682)
Q Consensus 619 ~l~~re~~v~~~r~g~~~~~~~tl~e~~~~~~~~~er~rqi~~~a~~~l~~ 669 (682)
T Consensus 17 LLT~kQ~~~~~lyy----~~DlSl~EIAe~~~iSRQaV~D~ikr~~~~L~~ 63 (105)
T PRK00118 17 LLTEKQRNYMELYY----LDDYSLGEIAEEFNVSRQAVYDNIKRTEKLLED 63 (105)
T ss_pred HCCHHHHHHHHHHH----HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 75599999999998----854999999899698599999999999999999