HHsearch alignment for GI: 254780289 and conserved domain: PRK05572

>PRK05572 sporulation sigma factor SigF; Validated.
Probab=94.89  E-value=0.031  Score=36.61  Aligned_cols=59  Identities=20%  Similarity=0.159  Sum_probs=39.3

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC--CHHHHHHH-------HHHHHHHCCCHHHHHHHHHH
Q ss_conf             9768897889999999998899999998728--23899999-------99987311710367876421
Q gi|254780289|r  130 SIELLSREGEIAIAKRIEAGRAMMMASLCES--PLTFQALI-------IWRDELNDGTTLLREIIDLE  188 (682)
Q Consensus       130 ~V~LLTREgEIeIAKRIE~G~~~i~~al~~~--P~ti~~il-------~~~e~i~~ge~~LrdIIDld  188 (682)
T Consensus         8 ~~~~Ls~eee~~L~~~~~~Gd~~Ar~~Li~~nlrLV~siA~ry~~~g~~~~DLiQeG~iGLi~A~ekF   75 (251)
T PRK05572          8 KKEQLKDEENKELIKKAQDGDKEARDKLVEKNLRLVWSVVQRFLNRGYEPDDLFQIGCIGLLKAVDKF   75 (251)
T ss_pred             CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf             68999999999999999807999999999985999999998775899998899999999999996225