HHsearch alignment for GI: 254780289 and conserved domain: PRK10188

>PRK10188 DNA-binding transcriptional activator SdiA; Provisional.

Probab=95.47  E-value=0.06  Score=34.33  Aligned_cols=52  Identities=13%  Similarity=0.340  Sum_probs=46.9

Q ss_pred             CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf             299889999999818798674688999899667899999999999998329677787
Q gi|254780289|r  619 SLTPREERVLRMRFGIGMNTDHTLEEVGKQFCVTRERIRQIEAKAIRKLKHPSRSKK  675 (682)
Q Consensus       619 ~l~~re~~v~~~r~g~~~~~~~tl~e~~~~~~~~~er~rqi~~~a~~~l~~~~~~~~  675 (682)
T Consensus       179 ~LT~RE~E~L~W~-----A~GKTs~EIa~IL~ISe~TV~fHl~na~~KL~a~Nr~qA  230 (240)
T PRK10188        179 NFSKREKEILKWT-----AEGKTSAEIAMILSISENTVNFHQKNMQKKFNAPNKTQI  230 (240)
T ss_pred             CCCHHHHHHHHHH-----HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf             8998999999999-----779999999988399999999999999999589989999