HHsearch alignment for GI: 254780289 and conserved domain: PRK10651
>PRK10651 transcriptional regulator NarL; Provisional.
Probab=94.18 E-value=0.2 Score=30.29 Aligned_cols=54 Identities=20% Similarity=0.361 Sum_probs=47.7
Q ss_pred HCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf 32998899999998187986746889998996678999999999999983296777875
Q gi|254780289|r 618 ASLTPREERVLRMRFGIGMNTDHTLEEVGKQFCVTRERIRQIEAKAIRKLKHPSRSKKL 676 (682)
Q Consensus 618 ~~l~~re~~v~~~r~g~~~~~~~tl~e~~~~~~~~~er~rqi~~~a~~~l~~~~~~~~l 676 (682)
T Consensus 154 ~~LT~RE~eVL~ll-----~~G~snkeIA~~L~iS~~TV~~h~~~i~~KLgv~nr~ea~ 207 (216)
T PRK10651 154 NQLTPRERDILKLI-----AQGLSNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAA 207 (216)
T ss_pred CCCCHHHHHHHHHH-----HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 34898999999999-----8599999999996978999999999999984899999999